From f4c3d828f4969279969795f6c89ea9901c098ed5 Mon Sep 17 00:00:00 2001 From: Sandrine Bedard Date: Tue, 13 Feb 2024 16:32:14 -0500 Subject: [PATCH 01/21] add preprocessed data --- derivatives/data_preprocessed/README.md | 0 .../dataset_description.json | 101 ++++++++++++++++++ ...ub-amu01_flip-1_mt-on_space-other_MTS.json | 62 +++++++++++ ...-amu01_flip-1_mt-on_space-other_MTS.nii.gz | 1 + ...b-amu01_flip-2_mt-off_space-other_MTS.json | 61 +++++++++++ ...amu01_flip-2_mt-off_space-other_MTS.nii.gz | 1 + .../anat/sub-amu01_space-other_T1w.json | 63 +++++++++++ .../anat/sub-amu01_space-other_T1w.nii.gz | 1 + .../anat/sub-amu01_space-other_T2star.json | 71 ++++++++++++ .../anat/sub-amu01_space-other_T2star.nii.gz | 1 + .../anat/sub-amu01_space-other_T2w.json | 63 +++++++++++ .../anat/sub-amu01_space-other_T2w.nii.gz | 1 + .../dwi/sub-amu01_rec-average_dwi.nii.gz | 1 + ...ub-amu02_flip-1_mt-on_space-other_MTS.json | 62 +++++++++++ ...-amu02_flip-1_mt-on_space-other_MTS.nii.gz | 1 + 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Cohen-Adad", + "M. Abramovic", + "C. Arneitz", + "L. Barlow", + "B. De Leener", + "J. Doyon", + "F. Eippert", + "J. Finsterbusch", + "A. Hagiwara", + "K. Kamiya", + "H. Karbasforoushan", + "A. Khatibi", + "N. Kinany", + "S. Kusmia", + "C. Laule", + "T. Leutritz", + "E. Martinez-Heras", + "D. Papp", + "M. Seif", + "Y. Suzuki", + "G. Tackley", + "A. Tinnermann", + "N. Weiskopf", + "R. Wise", + "A. V. Dvorak", + "S. Kolind", + "S. Smith", + "B. Landman", + "K. O\u2019Grady", + "A. Combes", + "P. Freund", + "Y. Kong", + "Y. Liu", + "Y. Duan", + "T. Hor\u00e1k", + "P. Kudli\u010dka", + "J. Valo\u0161ek", + "K. Paul", + "L. Mattera", + "D. Van De Ville", + "M.M. Lagan\u00e0", + "A. Smith", + "N.D. Kurniawan", + "M.J. Ruitenberg", + "M. Barth", + "N. Atcheson", + "P.-G. Henry", + "J. Joers", + "R. Labounek", + "C. Lenglet", + "I. Nestrasil", + "T. Parrish", + "Z. Smith\u00a0", + "A. Foias", + "R.L. Barry", + "G. Savini", + "J. Xu", + "A. Seifert", + "J-W. Kim", + "D. Pareto", + "\u00c0. Rovira", + "V. Callot", + "P. De Sousa", + "A.J.E. Combes", + "C. Law", + "C.Gandini Wheeler-Kingshott", + "H. Benali", + "K.A. Weber II", + "K.P. O'Grady", + "M. Descoteaux", + "M. Dost\u00e1l", + "M. Fratini", + "M. Ke\u0159kovsk\u00fd", + "P. Wyss", + "S.A. Smith", + "F. Grussu", + "M. Battiston", + "M. C. Yiannakas", + "R. S. Samson" + ], + "Acknowledgements": "We thank Gerald Moran and Bart Schraa (Siemens Healthcare), Suchandrima Banerjee and Naoyuki Takei (GE Healthcare), Carollyn Hurst, Andr\u00e9 Cyr, Arnaud Bor\u00e9 and Pierre Bellec (Functional Neuroimaging Unit), Charles Tremblay (Polytechnique Montreal), Antonys Melek and Habib Benali (PERFORM center, Concordia University), Ives Levesque (McGill University) and all the volunteers who participated in the Spinal Cord MRI Public Database.", + "Funding": [ + "Funded by the Canada Research Chair in Quantitative Magnetic Resonance Imaging [950-230815]", + "the Canadian Institute of Health Research [CIHR FDN-143263]", + "the Canada Foundation for Innovation [32454, 34824]", + "the Fonds de Recherche du Qu\u00e9bec - Sant\u00e9 [28826]", + "the Fonds de Recherche du Qu\u00e9bec - Nature et Technologies [2015-PR-182754]", + "the Natural Sciences and Engineering Research Council of Canada [435897-2013]", + "the Canada First Research Excellence Fund (IVADO and TransMedTech)", + "the Quebec BioImaging Network [5886]", + "Spinal Research and Wings for Life (INSPIRED project)", + "the National Institutes of Health (NIH) through grant R00EB016689 (R.L.B.)", + "the Instituto Investigaci\u00f3n Carlos III (Spain, PI18/00823). The content is solely the responsibility of the authors and does not necessarily represent the official views of the NIH." + ], + "DatasetDOI": "10.18112/openneuro.ds002902.v1.0.0" +} diff --git a/derivatives/data_preprocessed/sub-amu01/anat/sub-amu01_flip-1_mt-on_space-other_MTS.json b/derivatives/data_preprocessed/sub-amu01/anat/sub-amu01_flip-1_mt-on_space-other_MTS.json new file mode 100644 index 0000000000..23b5c6cb96 --- /dev/null +++ b/derivatives/data_preprocessed/sub-amu01/anat/sub-amu01_flip-1_mt-on_space-other_MTS.json @@ -0,0 +1,62 @@ +{ + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Verio", + "InstitutionName": "CEMEREM", + "InstitutionalDepartmentName": "CEMEREM", + "InstitutionAddress": "RUE_ST_PIERRE_264_MARSEILLE...92C536..._District_FR_13006", + "DeviceSerialNumber": "40146", + "StationName": "MRC40146", + "PatientPosition": "HFS", + "ProcedureStepDescription": "TEST_VC_SPINE", + "SoftwareVersions": 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a/derivatives/data_preprocessed/sub-geneva04/anat/sub-geneva04_flip-2_mt-off_space-other_MTS.json b/derivatives/data_preprocessed/sub-geneva04/anat/sub-geneva04_flip-2_mt-off_space-other_MTS.json new file mode 100644 index 0000000000..900d0d89ef --- /dev/null +++ b/derivatives/data_preprocessed/sub-geneva04/anat/sub-geneva04_flip-2_mt-off_space-other_MTS.json @@ -0,0 +1,65 @@ +{ + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 123.257, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma", + "InstitutionName": "Fondation_Campus_Biotech_Geneva", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "Chemin_des_Mines_9_Geneve_District_CH_1211", + "DeviceSerialNumber": "66054", + "StationName": "AWP66054", + "BodyPartExamined": "SPINE", + "PatientPosition": "HFS", + "ProcedureStepDescription": "D.Van_de_Ville_Nawal", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-T1w", + "ProtocolName": 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--git a/derivatives/data_preprocessed/sub-geneva06/anat/sub-geneva06_space-other_T2w.nii.gz b/derivatives/data_preprocessed/sub-geneva06/anat/sub-geneva06_space-other_T2w.nii.gz new file mode 100644 index 0000000000..0162af3ecb --- /dev/null +++ b/derivatives/data_preprocessed/sub-geneva06/anat/sub-geneva06_space-other_T2w.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s19743509--29d7baabed1934fdabfa731af64e6b9d555d0938e4c6ad94f56e8c8b557132a7.nii.gz diff --git a/derivatives/data_preprocessed/sub-geneva06/dwi/sub-geneva06_rec-average_dwi.nii.gz b/derivatives/data_preprocessed/sub-geneva06/dwi/sub-geneva06_rec-average_dwi.nii.gz new file mode 100644 index 0000000000..46e744c8f2 --- /dev/null +++ b/derivatives/data_preprocessed/sub-geneva06/dwi/sub-geneva06_rec-average_dwi.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s389120--e8f7adfeb1527e2f6c4dd1015b095fc83e49b9ca1773c765da9d85c1d204dde5.nii.gz diff --git 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b/derivatives/data_preprocessed/sub-mniPilot1/anat/sub-mniPilot1_flip-2_mt-off_space-other_MTS.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s1821202--b128d748ee67b07029de5b6baef324201d651766c2facc5c933c45c11ca5ef55.nii.gz diff --git a/derivatives/data_preprocessed/sub-mniPilot1/anat/sub-mniPilot1_space-other_T1w.json b/derivatives/data_preprocessed/sub-mniPilot1/anat/sub-mniPilot1_space-other_T1w.json new file mode 100644 index 0000000000..c473765765 --- /dev/null +++ b/derivatives/data_preprocessed/sub-mniPilot1/anat/sub-mniPilot1_space-other_T1w.json @@ -0,0 +1,66 @@ +{ + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma_fit", + "InstitutionName": "Mc_Connell_Brain_Imaging_Centre", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "University_Street_3801_Montreal_District_CA_H3A_2B4", + "DeviceSerialNumber": "167017", + "StationName": "MRC35056", + "BodyPartExamined": "BRAIN", + "PatientPosition": 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b/derivatives/data_preprocessed/sub-mniPilot1/anat/sub-mniPilot1_space-other_T2w.json @@ -0,0 +1,67 @@ +{ + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma_fit", + "InstitutionName": "Mc_Connell_Brain_Imaging_Centre", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "University_Street_3801_Montreal_District_CA_H3A_2B4", + "DeviceSerialNumber": "167017", + "StationName": "MRC35056", + "BodyPartExamined": "BRAIN", + "PatientPosition": "HFS", + "ProcedureStepDescription": "Functional_Dr._Doyon", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "T2w", + "ProtocolName": "T2w", + "ScanningSequence": "SE", + "SequenceVariant": "SK_SP_OSP", + "ScanOptions": "PFP", + "SequenceName": "_spcR_100", + "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS3D", "DIS2D"], + "SeriesNumber": 6, + "AcquisitionTime": "16:09:33.702500", + "AcquisitionNumber": 1, + 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a/derivatives/data_preprocessed/sub-mniPilot1/anat/sub-mniPilot1_space-other_T2w.nii.gz b/derivatives/data_preprocessed/sub-mniPilot1/anat/sub-mniPilot1_space-other_T2w.nii.gz new file mode 100644 index 0000000000..ba1ee2f606 --- /dev/null +++ b/derivatives/data_preprocessed/sub-mniPilot1/anat/sub-mniPilot1_space-other_T2w.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s10297558--561adf1c08e8eeec0482f3940f08244c32056c8090cb4fce766e691d037facbc.nii.gz diff --git a/derivatives/data_preprocessed/sub-mniPilot1/dwi/sub-mniPilot1_rec-average_dwi.nii.gz b/derivatives/data_preprocessed/sub-mniPilot1/dwi/sub-mniPilot1_rec-average_dwi.nii.gz new file mode 100644 index 0000000000..088e83a7d5 --- /dev/null +++ b/derivatives/data_preprocessed/sub-mniPilot1/dwi/sub-mniPilot1_rec-average_dwi.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s388821--5762586e02daccd0d9a949da0d3aa7073d2c910bf284fb4d42bd62dbcef27013.nii.gz diff --git a/derivatives/data_preprocessed/sub-mniS01/anat/sub-mniS01_flip-1_mt-on_space-other_MTS.json b/derivatives/data_preprocessed/sub-mniS01/anat/sub-mniS01_flip-1_mt-on_space-other_MTS.json new file mode 100644 index 0000000000..7d0aa97d2a --- /dev/null +++ b/derivatives/data_preprocessed/sub-mniS01/anat/sub-mniS01_flip-1_mt-on_space-other_MTS.json @@ -0,0 +1,65 @@ +{ + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma_fit", + "InstitutionName": "Mc_Connell_Brain_Imaging_Centre", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "University_Street_3801_Montreal_District_CA_H3A_2B4", + "DeviceSerialNumber": "167017", + "StationName": "MRC35056", + "BodyPartExamined": "BRAIN", + "PatientPosition": "HFS", + "ProcedureStepDescription": "Functional_Dr._Doyon", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-MT1", + "ProtocolName": "GRE-MT1", + "ScanningSequence": 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b/derivatives/data_preprocessed/sub-vuiisIngenia06/anat/sub-vuiisIngenia06_space-other_T2star.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s8876799--d7562ff689c5a872fc55e2a6a611011b420f2523adc66f8abcc0f21aa35b33b8.nii.gz diff --git a/derivatives/data_preprocessed/sub-vuiisIngenia06/anat/sub-vuiisIngenia06_space-other_T2w.json b/derivatives/data_preprocessed/sub-vuiisIngenia06/anat/sub-vuiisIngenia06_space-other_T2w.json new file mode 100644 index 0000000000..bbc766c4e7 --- /dev/null +++ b/derivatives/data_preprocessed/sub-vuiisIngenia06/anat/sub-vuiisIngenia06_space-other_T2w.json @@ -0,0 +1,53 @@ +{ + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 127.771, + "Manufacturer": "Philips", + "ManufacturersModelName": "Ingenia_Elition_X", + "InstitutionName": "VANDERBILT_INSTITUTE_OF_IMAGING", + "InstitutionalDepartmentName": "MRI_DEPT.", + "InstitutionAddress": "1161_21ST_AVE._SOUTH", + "DeviceSerialNumber": "45051", + "StationName": "PHILIPS-JJJ61LI", + 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0.999974, + 0.00706277, + 0.00921657, + 0.00707251, + -0.999933 ], + "InPlanePhaseEncodingDirectionDICOM": "ROW", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181022 GCC4.8.5" +} diff --git a/derivatives/data_preprocessed/sub-vuiisIngenia06/anat/sub-vuiisIngenia06_space-other_T2w.nii.gz b/derivatives/data_preprocessed/sub-vuiisIngenia06/anat/sub-vuiisIngenia06_space-other_T2w.nii.gz new file mode 100644 index 0000000000..a00162b535 --- /dev/null +++ b/derivatives/data_preprocessed/sub-vuiisIngenia06/anat/sub-vuiisIngenia06_space-other_T2w.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s16488202--e3f7504db0ab309e3805641f95779785b4a9a7df3285352bee14e6aaf0331cf6.nii.gz diff --git a/derivatives/data_preprocessed/sub-vuiisIngenia06/dwi/sub-vuiisIngenia06_rec-average_dwi.nii.gz b/derivatives/data_preprocessed/sub-vuiisIngenia06/dwi/sub-vuiisIngenia06_rec-average_dwi.nii.gz new file mode 100644 index 0000000000..89a12b774d --- /dev/null +++ b/derivatives/data_preprocessed/sub-vuiisIngenia06/dwi/sub-vuiisIngenia06_rec-average_dwi.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s469647--efb0397163b3f79959c1da2dd6fac3bdbb9c9ce680e53370650868c465b70371.nii.gz From 6d937f1a0eee81e3eef2040dd735a4300dd99803 Mon Sep 17 00:00:00 2001 From: Sandrine Bedard Date: Thu, 15 Feb 2024 14:10:35 -0500 Subject: [PATCH 02/21] add labels_softseg_bin in derivatives --- .../sub-amu01_flip-1_mt-on_space-other_MTS_softseg_bin.json | 4 ++++ .../sub-amu01_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz | 1 + .../sub-amu01_flip-2_mt-off_space-other_MTS_softseg_bin.json | 4 ++++ ...sub-amu01_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz | 1 + .../sub-amu01/anat/sub-amu01_space-other_T1w_softseg_bin.json | 4 ++++ .../anat/sub-amu01_space-other_T1w_softseg_bin.nii.gz | 1 + .../anat/sub-amu01_space-other_T2star_softseg_bin.json | 4 ++++ .../anat/sub-amu01_space-other_T2star_softseg_bin.nii.gz | 1 + 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0000000000..8190f8bf00 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-amu03/anat/sub-amu03_space-other_T1w_softseg_bin.json @@ -0,0 +1,4 @@ +{ + "Author": "Sandrine Bedard", + "Date": "2022-10-22 14:35:59" +} \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-amu03/anat/sub-amu03_space-other_T1w_softseg_bin.nii.gz b/derivatives/labels_softseg_bin/sub-amu03/anat/sub-amu03_space-other_T1w_softseg_bin.nii.gz new file mode 100644 index 0000000000..3dbeeba5ed --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-amu03/anat/sub-amu03_space-other_T1w_softseg_bin.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s74887--f6e0718814c605cc0f85b5b5c80afbccdd92ca1dcafea3dd2e45727fa8a5aa62.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-amu03/anat/sub-amu03_space-other_T2star_softseg_bin.json b/derivatives/labels_softseg_bin/sub-amu03/anat/sub-amu03_space-other_T2star_softseg_bin.json new file mode 100644 index 0000000000..8190f8bf00 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-amu03/anat/sub-amu03_space-other_T2star_softseg_bin.json @@ -0,0 +1,4 @@ +{ + "Author": "Sandrine Bedard", + "Date": "2022-10-22 14:35:59" +} \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-amu03/anat/sub-amu03_space-other_T2star_softseg_bin.nii.gz b/derivatives/labels_softseg_bin/sub-amu03/anat/sub-amu03_space-other_T2star_softseg_bin.nii.gz new file mode 100644 index 0000000000..ef3ec07368 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-amu03/anat/sub-amu03_space-other_T2star_softseg_bin.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s14671--e31e15abd7239a91cfbbfd80db51b8bc210bebb8bf89c3985dab8329f428508b.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-amu03/anat/sub-amu03_space-other_T2w_softseg_bin.json b/derivatives/labels_softseg_bin/sub-amu03/anat/sub-amu03_space-other_T2w_softseg_bin.json new file mode 100644 index 0000000000..8190f8bf00 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-amu03/anat/sub-amu03_space-other_T2w_softseg_bin.json @@ -0,0 +1,4 @@ +{ + "Author": "Sandrine Bedard", + "Date": "2022-10-22 14:35:59" +} \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-amu03/anat/sub-amu03_space-other_T2w_softseg_bin.nii.gz b/derivatives/labels_softseg_bin/sub-amu03/anat/sub-amu03_space-other_T2w_softseg_bin.nii.gz new file mode 100644 index 0000000000..6e18f67580 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-amu03/anat/sub-amu03_space-other_T2w_softseg_bin.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s36351--0f92f9b7f9765ab657db2a3884059c681c823a41b80ca4b80192c87c7514a9c6.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-amu03/dwi/sub-amu03_rec-average_dwi_softseg_bin.json b/derivatives/labels_softseg_bin/sub-amu03/dwi/sub-amu03_rec-average_dwi_softseg_bin.json new file mode 100644 index 0000000000..8190f8bf00 --- /dev/null +++ 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b/derivatives/labels_softseg_bin/sub-amu04/anat/sub-amu04_flip-1_mt-on_space-other_MTS_softseg_bin.json @@ -0,0 +1,4 @@ +{ + "Author": "Sandrine Bedard", + "Date": "2022-10-22 14:35:59" +} \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-amu04/anat/sub-amu04_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz b/derivatives/labels_softseg_bin/sub-amu04/anat/sub-amu04_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz new file mode 100644 index 0000000000..7f52113ce6 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-amu04/anat/sub-amu04_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s7230--df7c18ca708d1d8ef00b36273e0bfba5ef8e14b8dd274e5e4ee1f88ac0f68747.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-amu04/anat/sub-amu04_flip-2_mt-off_space-other_MTS_softseg_bin.json b/derivatives/labels_softseg_bin/sub-amu04/anat/sub-amu04_flip-2_mt-off_space-other_MTS_softseg_bin.json new file mode 100644 index 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b/derivatives/labels_softseg_bin/sub-amu05/anat/sub-amu05_space-other_T2w_softseg_bin.json @@ -0,0 +1,4 @@ +{ + "Author": "Sandrine Bedard", + "Date": "2022-10-22 14:36:00" +} \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-amu05/anat/sub-amu05_space-other_T2w_softseg_bin.nii.gz b/derivatives/labels_softseg_bin/sub-amu05/anat/sub-amu05_space-other_T2w_softseg_bin.nii.gz new file mode 100644 index 0000000000..254b8a66bd --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-amu05/anat/sub-amu05_space-other_T2w_softseg_bin.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s37072--cd900de7c40067e278b55798b9d3ccca65937c016313f24d45d70160cf1c4410.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-amu05/dwi/sub-amu05_rec-average_dwi_softseg_bin.json b/derivatives/labels_softseg_bin/sub-amu05/dwi/sub-amu05_rec-average_dwi_softseg_bin.json new file mode 100644 index 0000000000..19fed7e193 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-amu05/dwi/sub-amu05_rec-average_dwi_softseg_bin.json @@ -0,0 +1,4 @@ +{ + "Author": "Sandrine Bedard", + "Date": "2022-10-22 14:36:00" +} \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-amu05/dwi/sub-amu05_rec-average_dwi_softseg_bin.nii.gz b/derivatives/labels_softseg_bin/sub-amu05/dwi/sub-amu05_rec-average_dwi_softseg_bin.nii.gz new file mode 100644 index 0000000000..2ed1265863 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-amu05/dwi/sub-amu05_rec-average_dwi_softseg_bin.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s1367--33c2fe270a589f02c8568d8148d7ed2703521b10a3eb8cde9c382d36b9893941.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-balgrist01/anat/sub-balgrist01_flip-1_mt-on_space-other_MTS_softseg_bin.json b/derivatives/labels_softseg_bin/sub-balgrist01/anat/sub-balgrist01_flip-1_mt-on_space-other_MTS_softseg_bin.json new file mode 100644 index 0000000000..19fed7e193 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-balgrist01/anat/sub-balgrist01_flip-1_mt-on_space-other_MTS_softseg_bin.json @@ -0,0 +1,4 @@ +{ + "Author": "Sandrine Bedard", + "Date": "2022-10-22 14:36:00" +} \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-balgrist01/anat/sub-balgrist01_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz b/derivatives/labels_softseg_bin/sub-balgrist01/anat/sub-balgrist01_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz new file mode 100644 index 0000000000..311feeefd1 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-balgrist01/anat/sub-balgrist01_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s7278--ea7de83d5a9004936583e1dab6b58fb76dbc074909dd2aa1f1d5a37edf8c1af6.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-balgrist01/anat/sub-balgrist01_flip-2_mt-off_space-other_MTS_softseg_bin.json 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a/derivatives/labels_softseg_bin/sub-balgrist02/anat/sub-balgrist02_space-other_T1w_softseg_bin.nii.gz b/derivatives/labels_softseg_bin/sub-balgrist02/anat/sub-balgrist02_space-other_T1w_softseg_bin.nii.gz new file mode 100644 index 0000000000..f729213f18 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-balgrist02/anat/sub-balgrist02_space-other_T1w_softseg_bin.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s75136--11b26da8055b078b93eee3a8a345346e029eacb533c7f174e68521572686b09e.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-balgrist02/anat/sub-balgrist02_space-other_T2star_softseg_bin.json b/derivatives/labels_softseg_bin/sub-balgrist02/anat/sub-balgrist02_space-other_T2star_softseg_bin.json new file mode 100644 index 0000000000..19fed7e193 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-balgrist02/anat/sub-balgrist02_space-other_T2star_softseg_bin.json @@ -0,0 +1,4 @@ +{ + "Author": "Sandrine Bedard", + "Date": "2022-10-22 14:36:00" +} \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-balgrist02/anat/sub-balgrist02_space-other_T2star_softseg_bin.nii.gz b/derivatives/labels_softseg_bin/sub-balgrist02/anat/sub-balgrist02_space-other_T2star_softseg_bin.nii.gz new file mode 100644 index 0000000000..79083c5560 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-balgrist02/anat/sub-balgrist02_space-other_T2star_softseg_bin.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s14765--dcdd38acff73adab7083f5ecae0481f7a78a94d881f300d09312eb5162562ca9.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-balgrist02/anat/sub-balgrist02_space-other_T2w_softseg_bin.json b/derivatives/labels_softseg_bin/sub-balgrist02/anat/sub-balgrist02_space-other_T2w_softseg_bin.json new file mode 100644 index 0000000000..19fed7e193 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-balgrist02/anat/sub-balgrist02_space-other_T2w_softseg_bin.json @@ -0,0 +1,4 @@ +{ + "Author": "Sandrine Bedard", + "Date": "2022-10-22 14:36:00" +} \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-balgrist02/anat/sub-balgrist02_space-other_T2w_softseg_bin.nii.gz b/derivatives/labels_softseg_bin/sub-balgrist02/anat/sub-balgrist02_space-other_T2w_softseg_bin.nii.gz new file mode 100644 index 0000000000..d82f5f46ef --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-balgrist02/anat/sub-balgrist02_space-other_T2w_softseg_bin.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s37052--840e0d9831231efd2d07a4d17cc4f37b5e84aff17ec43ee73ac9057be3bb0fb4.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-balgrist02/dwi/sub-balgrist02_rec-average_dwi_softseg_bin.json b/derivatives/labels_softseg_bin/sub-balgrist02/dwi/sub-balgrist02_rec-average_dwi_softseg_bin.json new file mode 100644 index 0000000000..19fed7e193 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-balgrist02/dwi/sub-balgrist02_rec-average_dwi_softseg_bin.json @@ -0,0 +1,4 @@ +{ + "Author": "Sandrine Bedard", + "Date": "2022-10-22 14:36:00" +} \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-balgrist02/dwi/sub-balgrist02_rec-average_dwi_softseg_bin.nii.gz b/derivatives/labels_softseg_bin/sub-balgrist02/dwi/sub-balgrist02_rec-average_dwi_softseg_bin.nii.gz new file mode 100644 index 0000000000..0f29a92894 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-balgrist02/dwi/sub-balgrist02_rec-average_dwi_softseg_bin.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s1029--8735e890d28d4de250ca6405658bec8855553f04d2ea1d7fba939e84ed03f085.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-balgrist03/anat/sub-balgrist03_flip-1_mt-on_space-other_MTS_softseg_bin.json b/derivatives/labels_softseg_bin/sub-balgrist03/anat/sub-balgrist03_flip-1_mt-on_space-other_MTS_softseg_bin.json new file mode 100644 index 0000000000..19fed7e193 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-balgrist03/anat/sub-balgrist03_flip-1_mt-on_space-other_MTS_softseg_bin.json @@ -0,0 +1,4 @@ +{ + "Author": "Sandrine Bedard", + "Date": "2022-10-22 14:36:00" +} \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-balgrist03/anat/sub-balgrist03_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz b/derivatives/labels_softseg_bin/sub-balgrist03/anat/sub-balgrist03_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz new file mode 100644 index 0000000000..e66b25e0b0 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-balgrist03/anat/sub-balgrist03_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s7153--efe10acc92075474f87ffa051ad11148494c3a21a27d4a2bca420cb601d3a30c.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-balgrist03/anat/sub-balgrist03_flip-2_mt-off_space-other_MTS_softseg_bin.json b/derivatives/labels_softseg_bin/sub-balgrist03/anat/sub-balgrist03_flip-2_mt-off_space-other_MTS_softseg_bin.json new file mode 100644 index 0000000000..19fed7e193 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-balgrist03/anat/sub-balgrist03_flip-2_mt-off_space-other_MTS_softseg_bin.json @@ -0,0 +1,4 @@ +{ + "Author": "Sandrine Bedard", + "Date": "2022-10-22 14:36:00" +} \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-balgrist03/anat/sub-balgrist03_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz b/derivatives/labels_softseg_bin/sub-balgrist03/anat/sub-balgrist03_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz new file mode 100644 index 0000000000..c794333bfc --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-balgrist03/anat/sub-balgrist03_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s7116--3eafb267bfdd0e6164272a3d58a7093de2683aac5e35cdc696909551718ca5f1.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-balgrist03/anat/sub-balgrist03_space-other_T1w_softseg_bin.json b/derivatives/labels_softseg_bin/sub-balgrist03/anat/sub-balgrist03_space-other_T1w_softseg_bin.json new file 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new file mode 100644 index 0000000000..19fed7e193 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-balgrist03/anat/sub-balgrist03_space-other_T2star_softseg_bin.json @@ -0,0 +1,4 @@ +{ + "Author": "Sandrine Bedard", + "Date": "2022-10-22 14:36:00" +} \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-balgrist03/anat/sub-balgrist03_space-other_T2star_softseg_bin.nii.gz b/derivatives/labels_softseg_bin/sub-balgrist03/anat/sub-balgrist03_space-other_T2star_softseg_bin.nii.gz new file mode 100644 index 0000000000..f02c230224 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-balgrist03/anat/sub-balgrist03_space-other_T2star_softseg_bin.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s14558--c3e82b76d4b4fdd3189a043f297f9ef84c7cbaa31ff20bcef37892b83c6708eb.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-balgrist03/anat/sub-balgrist03_space-other_T2w_softseg_bin.json b/derivatives/labels_softseg_bin/sub-balgrist03/anat/sub-balgrist03_space-other_T2w_softseg_bin.json new file mode 100644 index 0000000000..6d0515abc8 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-balgrist03/anat/sub-balgrist03_space-other_T2w_softseg_bin.json @@ -0,0 +1,4 @@ +{ + "Author": "Sandrine Bedard", + "Date": "2022-10-22 14:36:01" +} \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-balgrist03/anat/sub-balgrist03_space-other_T2w_softseg_bin.nii.gz b/derivatives/labels_softseg_bin/sub-balgrist03/anat/sub-balgrist03_space-other_T2w_softseg_bin.nii.gz new file mode 100644 index 0000000000..e25aadfff4 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-balgrist03/anat/sub-balgrist03_space-other_T2w_softseg_bin.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s36927--6ac940b9cc18e55f6e8dbf0fc9e4866a7084bc0326b7baaa9a1dff951f3efd84.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-balgrist03/dwi/sub-balgrist03_rec-average_dwi_softseg_bin.json b/derivatives/labels_softseg_bin/sub-balgrist03/dwi/sub-balgrist03_rec-average_dwi_softseg_bin.json new file mode 100644 index 0000000000..6d0515abc8 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-balgrist03/dwi/sub-balgrist03_rec-average_dwi_softseg_bin.json @@ -0,0 +1,4 @@ +{ + "Author": "Sandrine Bedard", + "Date": "2022-10-22 14:36:01" +} \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-balgrist03/dwi/sub-balgrist03_rec-average_dwi_softseg_bin.nii.gz b/derivatives/labels_softseg_bin/sub-balgrist03/dwi/sub-balgrist03_rec-average_dwi_softseg_bin.nii.gz new file mode 100644 index 0000000000..3d46f283e9 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-balgrist03/dwi/sub-balgrist03_rec-average_dwi_softseg_bin.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s928--59cf60511d5e4c320bf57b9c2f718ed8b94391825c0fe8d6d066b474ae731d84.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-balgrist04/anat/sub-balgrist04_flip-1_mt-on_space-other_MTS_softseg_bin.json b/derivatives/labels_softseg_bin/sub-balgrist04/anat/sub-balgrist04_flip-1_mt-on_space-other_MTS_softseg_bin.json new file mode 100644 index 0000000000..6d0515abc8 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-balgrist04/anat/sub-balgrist04_flip-1_mt-on_space-other_MTS_softseg_bin.json @@ -0,0 +1,4 @@ +{ + "Author": "Sandrine Bedard", + "Date": "2022-10-22 14:36:01" +} \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-balgrist04/anat/sub-balgrist04_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz b/derivatives/labels_softseg_bin/sub-balgrist04/anat/sub-balgrist04_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz new file mode 100644 index 0000000000..152ceac445 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-balgrist04/anat/sub-balgrist04_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s7307--74f9dd08ab4bb410502d6ad27726de0c4518a9ca4cb396a669ea26f7bc9d42d5.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-balgrist04/anat/sub-balgrist04_flip-2_mt-off_space-other_MTS_softseg_bin.json b/derivatives/labels_softseg_bin/sub-balgrist04/anat/sub-balgrist04_flip-2_mt-off_space-other_MTS_softseg_bin.json new file mode 100644 index 0000000000..6d0515abc8 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-balgrist04/anat/sub-balgrist04_flip-2_mt-off_space-other_MTS_softseg_bin.json @@ -0,0 +1,4 @@ +{ + "Author": "Sandrine Bedard", + "Date": "2022-10-22 14:36:01" +} \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-balgrist04/anat/sub-balgrist04_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz b/derivatives/labels_softseg_bin/sub-balgrist04/anat/sub-balgrist04_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz new file mode 100644 index 0000000000..82a92d8b11 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-balgrist04/anat/sub-balgrist04_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s7208--b44a13de5da9ed0f70dc26865b864b1f066cdb767f8822f9e45c9be2f3ee1f59.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-balgrist04/anat/sub-balgrist04_space-other_T1w_softseg_bin.json b/derivatives/labels_softseg_bin/sub-balgrist04/anat/sub-balgrist04_space-other_T1w_softseg_bin.json new file mode 100644 index 0000000000..6d0515abc8 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-balgrist04/anat/sub-balgrist04_space-other_T1w_softseg_bin.json @@ -0,0 +1,4 @@ +{ + "Author": "Sandrine Bedard", + "Date": "2022-10-22 14:36:01" +} \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-balgrist04/anat/sub-balgrist04_space-other_T1w_softseg_bin.nii.gz b/derivatives/labels_softseg_bin/sub-balgrist04/anat/sub-balgrist04_space-other_T1w_softseg_bin.nii.gz new file mode 100644 index 0000000000..78635617f2 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-balgrist04/anat/sub-balgrist04_space-other_T1w_softseg_bin.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s74776--1159f91fbb70ca16177ed30f59c88b511b08b2d5f4c3a6a6261c8d66f7f0ab6e.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-balgrist04/anat/sub-balgrist04_space-other_T2star_softseg_bin.json b/derivatives/labels_softseg_bin/sub-balgrist04/anat/sub-balgrist04_space-other_T2star_softseg_bin.json new file mode 100644 index 0000000000..6d0515abc8 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-balgrist04/anat/sub-balgrist04_space-other_T2star_softseg_bin.json @@ -0,0 +1,4 @@ +{ + "Author": "Sandrine Bedard", + "Date": "2022-10-22 14:36:01" +} \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-balgrist04/anat/sub-balgrist04_space-other_T2star_softseg_bin.nii.gz b/derivatives/labels_softseg_bin/sub-balgrist04/anat/sub-balgrist04_space-other_T2star_softseg_bin.nii.gz new file mode 100644 index 0000000000..468cb0205d --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-balgrist04/anat/sub-balgrist04_space-other_T2star_softseg_bin.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s14731--797781d5e564f7576c7cd407c7d8697ea60ce7ad2422bf98a77355380cd29720.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-balgrist04/anat/sub-balgrist04_space-other_T2w_softseg_bin.json b/derivatives/labels_softseg_bin/sub-balgrist04/anat/sub-balgrist04_space-other_T2w_softseg_bin.json new file mode 100644 index 0000000000..6d0515abc8 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-balgrist04/anat/sub-balgrist04_space-other_T2w_softseg_bin.json @@ -0,0 +1,4 @@ +{ + "Author": "Sandrine Bedard", + "Date": "2022-10-22 14:36:01" +} \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-balgrist04/anat/sub-balgrist04_space-other_T2w_softseg_bin.nii.gz b/derivatives/labels_softseg_bin/sub-balgrist04/anat/sub-balgrist04_space-other_T2w_softseg_bin.nii.gz new file mode 100644 index 0000000000..70fcc77681 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-balgrist04/anat/sub-balgrist04_space-other_T2w_softseg_bin.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s37996--75dccec5650c3debe98c225934a6fecedf490dac4f6bad9a57bd2715b00e70f3.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-balgrist04/dwi/sub-balgrist04_rec-average_dwi_softseg_bin.json b/derivatives/labels_softseg_bin/sub-balgrist04/dwi/sub-balgrist04_rec-average_dwi_softseg_bin.json new file mode 100644 index 0000000000..6d0515abc8 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-balgrist04/dwi/sub-balgrist04_rec-average_dwi_softseg_bin.json @@ -0,0 +1,4 @@ +{ + "Author": "Sandrine Bedard", + "Date": "2022-10-22 14:36:01" +} \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-balgrist04/dwi/sub-balgrist04_rec-average_dwi_softseg_bin.nii.gz b/derivatives/labels_softseg_bin/sub-balgrist04/dwi/sub-balgrist04_rec-average_dwi_softseg_bin.nii.gz new file mode 100644 index 0000000000..988bb9cd8f --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-balgrist04/dwi/sub-balgrist04_rec-average_dwi_softseg_bin.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s1009--c771626bd7e7dc1ef29cb2f6e904ca835b35e55dd4078de8d9a70db165c2f925.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-balgrist05/anat/sub-balgrist05_flip-1_mt-on_space-other_MTS_softseg_bin.json b/derivatives/labels_softseg_bin/sub-balgrist05/anat/sub-balgrist05_flip-1_mt-on_space-other_MTS_softseg_bin.json new file mode 100644 index 0000000000..6d0515abc8 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-balgrist05/anat/sub-balgrist05_flip-1_mt-on_space-other_MTS_softseg_bin.json @@ -0,0 +1,4 @@ +{ + "Author": "Sandrine Bedard", + "Date": "2022-10-22 14:36:01" +} \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-balgrist05/anat/sub-balgrist05_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz b/derivatives/labels_softseg_bin/sub-balgrist05/anat/sub-balgrist05_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz new file mode 100644 index 0000000000..b3618758e5 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-balgrist05/anat/sub-balgrist05_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s7245--bd16e4e6938d882be14d5a605396061302742513c8d72d80592313a5e2e9b47a.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-balgrist05/anat/sub-balgrist05_flip-2_mt-off_space-other_MTS_softseg_bin.json b/derivatives/labels_softseg_bin/sub-balgrist05/anat/sub-balgrist05_flip-2_mt-off_space-other_MTS_softseg_bin.json new file mode 100644 index 0000000000..6d0515abc8 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-balgrist05/anat/sub-balgrist05_flip-2_mt-off_space-other_MTS_softseg_bin.json @@ -0,0 +1,4 @@ +{ + "Author": "Sandrine Bedard", + "Date": "2022-10-22 14:36:01" +} \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-balgrist05/anat/sub-balgrist05_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz b/derivatives/labels_softseg_bin/sub-balgrist05/anat/sub-balgrist05_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz new file mode 100644 index 0000000000..dff5bf2798 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-balgrist05/anat/sub-balgrist05_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s7197--600523258e91b18c40f00ee504f51209fab3a54ebd0454a6c759afb6f445f484.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-balgrist05/anat/sub-balgrist05_space-other_T1w_softseg_bin.json b/derivatives/labels_softseg_bin/sub-balgrist05/anat/sub-balgrist05_space-other_T1w_softseg_bin.json new file mode 100644 index 0000000000..6d0515abc8 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-balgrist05/anat/sub-balgrist05_space-other_T1w_softseg_bin.json @@ -0,0 +1,4 @@ +{ + "Author": "Sandrine Bedard", + "Date": "2022-10-22 14:36:01" +} \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-balgrist05/anat/sub-balgrist05_space-other_T1w_softseg_bin.nii.gz b/derivatives/labels_softseg_bin/sub-balgrist05/anat/sub-balgrist05_space-other_T1w_softseg_bin.nii.gz new file mode 100644 index 0000000000..599e192aa1 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-balgrist05/anat/sub-balgrist05_space-other_T1w_softseg_bin.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s75130--5602cbca369c3a401bd4e660a02244db6f302e44eec3ce474a53a941bd21edcf.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-balgrist05/anat/sub-balgrist05_space-other_T2star_softseg_bin.json b/derivatives/labels_softseg_bin/sub-balgrist05/anat/sub-balgrist05_space-other_T2star_softseg_bin.json new file mode 100644 index 0000000000..6d0515abc8 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-balgrist05/anat/sub-balgrist05_space-other_T2star_softseg_bin.json @@ -0,0 +1,4 @@ +{ + "Author": "Sandrine Bedard", + "Date": "2022-10-22 14:36:01" +} \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-balgrist05/anat/sub-balgrist05_space-other_T2star_softseg_bin.nii.gz b/derivatives/labels_softseg_bin/sub-balgrist05/anat/sub-balgrist05_space-other_T2star_softseg_bin.nii.gz new file mode 100644 index 0000000000..9d26738eb5 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-balgrist05/anat/sub-balgrist05_space-other_T2star_softseg_bin.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s14757--dc12eb8dade8545bdb3492bfff97d6faab8b60aa39d0a2d8abdee87efef367d8.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-balgrist05/anat/sub-balgrist05_space-other_T2w_softseg_bin.json b/derivatives/labels_softseg_bin/sub-balgrist05/anat/sub-balgrist05_space-other_T2w_softseg_bin.json new file mode 100644 index 0000000000..6d0515abc8 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-balgrist05/anat/sub-balgrist05_space-other_T2w_softseg_bin.json @@ -0,0 +1,4 @@ +{ + "Author": "Sandrine Bedard", + "Date": "2022-10-22 14:36:01" +} \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-balgrist05/anat/sub-balgrist05_space-other_T2w_softseg_bin.nii.gz b/derivatives/labels_softseg_bin/sub-balgrist05/anat/sub-balgrist05_space-other_T2w_softseg_bin.nii.gz new file mode 100644 index 0000000000..bec0a8938d --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-balgrist05/anat/sub-balgrist05_space-other_T2w_softseg_bin.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s37274--8a095b5a8822e08e7ca648f18d20852fc5ef80a2f97e910e91fe68c18212f973.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-balgrist05/dwi/sub-balgrist05_rec-average_dwi_softseg_bin.json b/derivatives/labels_softseg_bin/sub-balgrist05/dwi/sub-balgrist05_rec-average_dwi_softseg_bin.json new file mode 100644 index 0000000000..6d0515abc8 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-balgrist05/dwi/sub-balgrist05_rec-average_dwi_softseg_bin.json @@ -0,0 +1,4 @@ +{ + "Author": "Sandrine Bedard", + "Date": 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"2022-10-22 14:36:02" +} \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-barcelona03/dwi/sub-barcelona03_rec-average_dwi_softseg_bin.nii.gz b/derivatives/labels_softseg_bin/sub-barcelona03/dwi/sub-barcelona03_rec-average_dwi_softseg_bin.nii.gz new file mode 100644 index 0000000000..c9246954f5 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-barcelona03/dwi/sub-barcelona03_rec-average_dwi_softseg_bin.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s1039--0da4d382b1576f2b41b684a09d3fc2ef6b5d9eed7357aba0a9a561dc93ed54c0.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-barcelona04/anat/sub-barcelona04_flip-1_mt-on_space-other_MTS_softseg_bin.json b/derivatives/labels_softseg_bin/sub-barcelona04/anat/sub-barcelona04_flip-1_mt-on_space-other_MTS_softseg_bin.json new file mode 100644 index 0000000000..b87a891800 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-barcelona04/anat/sub-barcelona04_flip-1_mt-on_space-other_MTS_softseg_bin.json @@ -0,0 +1,4 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a/derivatives/labels_softseg_bin/sub-barcelona05/anat/sub-barcelona05_space-other_T1w_softseg_bin.nii.gz b/derivatives/labels_softseg_bin/sub-barcelona05/anat/sub-barcelona05_space-other_T1w_softseg_bin.nii.gz new file mode 100644 index 0000000000..358a083c07 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-barcelona05/anat/sub-barcelona05_space-other_T1w_softseg_bin.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s76231--4808858f6f877142afe689260b9be3ca14c893a2eea65d6db55c17761b3fad3c.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-barcelona05/anat/sub-barcelona05_space-other_T2star_softseg_bin.json b/derivatives/labels_softseg_bin/sub-barcelona05/anat/sub-barcelona05_space-other_T2star_softseg_bin.json new file mode 100644 index 0000000000..d1b0b64203 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-barcelona05/anat/sub-barcelona05_space-other_T2star_softseg_bin.json @@ -0,0 +1,4 @@ +{ + "Author": "Sandrine Bedard", + "Date": "2022-10-22 14:36:03" +} \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-barcelona05/anat/sub-barcelona05_space-other_T2star_softseg_bin.nii.gz b/derivatives/labels_softseg_bin/sub-barcelona05/anat/sub-barcelona05_space-other_T2star_softseg_bin.nii.gz new file mode 100644 index 0000000000..a167e4cbe3 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-barcelona05/anat/sub-barcelona05_space-other_T2star_softseg_bin.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s14536--6e90542a119279c17bba965c71f48734ab8a614289d3d3a98eb18c6a96aa8f8b.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-barcelona05/anat/sub-barcelona05_space-other_T2w_softseg_bin.json b/derivatives/labels_softseg_bin/sub-barcelona05/anat/sub-barcelona05_space-other_T2w_softseg_bin.json new file mode 100644 index 0000000000..d1b0b64203 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-barcelona05/anat/sub-barcelona05_space-other_T2w_softseg_bin.json @@ -0,0 +1,4 @@ +{ + "Author": "Sandrine Bedard", + "Date": "2022-10-22 14:36:03" +} \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-barcelona05/anat/sub-barcelona05_space-other_T2w_softseg_bin.nii.gz b/derivatives/labels_softseg_bin/sub-barcelona05/anat/sub-barcelona05_space-other_T2w_softseg_bin.nii.gz new file mode 100644 index 0000000000..6c4ae31d98 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-barcelona05/anat/sub-barcelona05_space-other_T2w_softseg_bin.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s38094--e1d41d51c1f48e6732aa6d2e8f56a10eae8329251b8ad2a270c65bd8f6894417.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-barcelona05/dwi/sub-barcelona05_rec-average_dwi_softseg_bin.json b/derivatives/labels_softseg_bin/sub-barcelona05/dwi/sub-barcelona05_rec-average_dwi_softseg_bin.json new file mode 100644 index 0000000000..d1b0b64203 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-barcelona05/dwi/sub-barcelona05_rec-average_dwi_softseg_bin.json @@ -0,0 +1,4 @@ +{ + "Author": "Sandrine Bedard", + "Date": "2022-10-22 14:36:03" +} \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-barcelona05/dwi/sub-barcelona05_rec-average_dwi_softseg_bin.nii.gz b/derivatives/labels_softseg_bin/sub-barcelona05/dwi/sub-barcelona05_rec-average_dwi_softseg_bin.nii.gz new file mode 100644 index 0000000000..820ad4bfb7 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-barcelona05/dwi/sub-barcelona05_rec-average_dwi_softseg_bin.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s920--05a3bedeaa72a4aa0abfa8b526d00acb4977c16584f689af6c6a663249746dba.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-barcelona06/anat/sub-barcelona06_flip-1_mt-on_space-other_MTS_softseg_bin.json b/derivatives/labels_softseg_bin/sub-barcelona06/anat/sub-barcelona06_flip-1_mt-on_space-other_MTS_softseg_bin.json new file mode 100644 index 0000000000..d1b0b64203 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-barcelona06/anat/sub-barcelona06_flip-1_mt-on_space-other_MTS_softseg_bin.json @@ -0,0 +1,4 @@ +{ + "Author": "Sandrine Bedard", + "Date": "2022-10-22 14:36:03" +} \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-barcelona06/anat/sub-barcelona06_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz b/derivatives/labels_softseg_bin/sub-barcelona06/anat/sub-barcelona06_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz new file mode 100644 index 0000000000..b45dbdcaad --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-barcelona06/anat/sub-barcelona06_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s7228--f82142ccbb9fc90c2123efebd7e06fa269ff4767f34e24c60df93c937ec09fdf.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-barcelona06/anat/sub-barcelona06_flip-2_mt-off_space-other_MTS_softseg_bin.json b/derivatives/labels_softseg_bin/sub-barcelona06/anat/sub-barcelona06_flip-2_mt-off_space-other_MTS_softseg_bin.json new file mode 100644 index 0000000000..d1b0b64203 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-barcelona06/anat/sub-barcelona06_flip-2_mt-off_space-other_MTS_softseg_bin.json @@ -0,0 +1,4 @@ +{ + "Author": "Sandrine Bedard", + "Date": "2022-10-22 14:36:03" +} \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-barcelona06/anat/sub-barcelona06_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz b/derivatives/labels_softseg_bin/sub-barcelona06/anat/sub-barcelona06_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz new file mode 100644 index 0000000000..1c2c863fc9 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-barcelona06/anat/sub-barcelona06_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s7117--adf63bfe867091da91f826470373f41abef1786c450cfb5173a6ff01aa57bfab.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-barcelona06/anat/sub-barcelona06_space-other_T1w_softseg_bin.json b/derivatives/labels_softseg_bin/sub-barcelona06/anat/sub-barcelona06_space-other_T1w_softseg_bin.json 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+++ b/derivatives/labels_softseg_bin/sub-beijingPrisma01/anat/sub-beijingPrisma01_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s7261--042633f0d1a5662a5d12c395740a34581700bee8ead9587069980bf944be1920.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-beijingPrisma01/anat/sub-beijingPrisma01_flip-2_mt-off_space-other_MTS_softseg_bin.json b/derivatives/labels_softseg_bin/sub-beijingPrisma01/anat/sub-beijingPrisma01_flip-2_mt-off_space-other_MTS_softseg_bin.json new file mode 100644 index 0000000000..c0903d718d --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-beijingPrisma01/anat/sub-beijingPrisma01_flip-2_mt-off_space-other_MTS_softseg_bin.json @@ -0,0 +1,4 @@ +{ + "Author": "Sandrine Bedard", + "Date": "2022-10-22 14:36:04" +} \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-beijingPrisma01/anat/sub-beijingPrisma01_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz 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a/derivatives/labels_softseg_bin/sub-beijingPrisma01/anat/sub-beijingPrisma01_space-other_T1w_softseg_bin.nii.gz b/derivatives/labels_softseg_bin/sub-beijingPrisma01/anat/sub-beijingPrisma01_space-other_T1w_softseg_bin.nii.gz new file mode 100644 index 0000000000..a2849ec563 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-beijingPrisma01/anat/sub-beijingPrisma01_space-other_T1w_softseg_bin.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s75939--78f1425be83f3bded8684c29496fc998f9b0552ed1d2d927bcb9b6fc51b50004.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-beijingPrisma01/anat/sub-beijingPrisma01_space-other_T2star_softseg_bin.json b/derivatives/labels_softseg_bin/sub-beijingPrisma01/anat/sub-beijingPrisma01_space-other_T2star_softseg_bin.json new file mode 100644 index 0000000000..c0903d718d --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-beijingPrisma01/anat/sub-beijingPrisma01_space-other_T2star_softseg_bin.json @@ -0,0 +1,4 @@ +{ + "Author": "Sandrine Bedard", + 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b/derivatives/labels_softseg_bin/sub-beijingPrisma01/anat/sub-beijingPrisma01_space-other_T2w_softseg_bin.json @@ -0,0 +1,4 @@ +{ + "Author": "Sandrine Bedard", + "Date": "2022-10-22 14:36:04" +} \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-beijingPrisma01/anat/sub-beijingPrisma01_space-other_T2w_softseg_bin.nii.gz b/derivatives/labels_softseg_bin/sub-beijingPrisma01/anat/sub-beijingPrisma01_space-other_T2w_softseg_bin.nii.gz new file mode 100644 index 0000000000..f92b4956a4 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-beijingPrisma01/anat/sub-beijingPrisma01_space-other_T2w_softseg_bin.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s37436--4d3b55f18f13c7b88a2204e1ea81101b7d12de12f5d4b199a06c74aae2333d04.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-beijingPrisma01/dwi/sub-beijingPrisma01_rec-average_dwi_softseg_bin.json b/derivatives/labels_softseg_bin/sub-beijingPrisma01/dwi/sub-beijingPrisma01_rec-average_dwi_softseg_bin.json new file 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b/derivatives/labels_softseg_bin/sub-beijingPrisma02/dwi/sub-beijingPrisma02_rec-average_dwi_softseg_bin.json @@ -0,0 +1,4 @@ +{ + "Author": "Sandrine Bedard", + "Date": "2022-10-22 14:36:05" +} \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-beijingPrisma02/dwi/sub-beijingPrisma02_rec-average_dwi_softseg_bin.nii.gz b/derivatives/labels_softseg_bin/sub-beijingPrisma02/dwi/sub-beijingPrisma02_rec-average_dwi_softseg_bin.nii.gz new file mode 100644 index 0000000000..133c64958a --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-beijingPrisma02/dwi/sub-beijingPrisma02_rec-average_dwi_softseg_bin.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s926--21f945e27d5653a6d630e99699496efce1ce9f46e39c8abe027ed2d7147d2a8d.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-beijingPrisma03/anat/sub-beijingPrisma03_flip-1_mt-on_space-other_MTS_softseg_bin.json 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b/derivatives/labels_softseg_bin/sub-beijingPrisma03/dwi/sub-beijingPrisma03_rec-average_dwi_softseg_bin.json @@ -0,0 +1,4 @@ +{ + "Author": "Sandrine Bedard", + "Date": "2022-10-22 14:36:05" +} \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-beijingPrisma03/dwi/sub-beijingPrisma03_rec-average_dwi_softseg_bin.nii.gz b/derivatives/labels_softseg_bin/sub-beijingPrisma03/dwi/sub-beijingPrisma03_rec-average_dwi_softseg_bin.nii.gz new file mode 100644 index 0000000000..dfa0ffdf86 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-beijingPrisma03/dwi/sub-beijingPrisma03_rec-average_dwi_softseg_bin.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s809--a5179393fa8174fc470c031e7af8e91f8dfac08d30065bd1c70e57944eb8da0c.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-beijingPrisma04/anat/sub-beijingPrisma04_flip-1_mt-on_space-other_MTS_softseg_bin.json 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a/derivatives/labels_softseg_bin/sub-beijingPrisma04/anat/sub-beijingPrisma04_space-other_T2star_softseg_bin.nii.gz b/derivatives/labels_softseg_bin/sub-beijingPrisma04/anat/sub-beijingPrisma04_space-other_T2star_softseg_bin.nii.gz new file mode 100644 index 0000000000..386e2d43d7 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-beijingPrisma04/anat/sub-beijingPrisma04_space-other_T2star_softseg_bin.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s14674--3e93fa86ddbea6a42504bc72799ff840fc92840bce0b44f2a3c6924e583e3900.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-beijingPrisma04/anat/sub-beijingPrisma04_space-other_T2w_softseg_bin.json b/derivatives/labels_softseg_bin/sub-beijingPrisma04/anat/sub-beijingPrisma04_space-other_T2w_softseg_bin.json new file mode 100644 index 0000000000..6846b7f869 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-beijingPrisma04/anat/sub-beijingPrisma04_space-other_T2w_softseg_bin.json @@ -0,0 +1,4 @@ +{ + "Author": "Sandrine Bedard", + "Date": "2022-10-22 14:36:05" +} \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-beijingPrisma04/anat/sub-beijingPrisma04_space-other_T2w_softseg_bin.nii.gz b/derivatives/labels_softseg_bin/sub-beijingPrisma04/anat/sub-beijingPrisma04_space-other_T2w_softseg_bin.nii.gz new file mode 100644 index 0000000000..0af459b703 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-beijingPrisma04/anat/sub-beijingPrisma04_space-other_T2w_softseg_bin.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s37317--fa6fd6019cdb8fc90d60d9c13db44281448e4e789cb2868f330227c9ff1f4c1e.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-beijingPrisma04/dwi/sub-beijingPrisma04_rec-average_dwi_softseg_bin.json b/derivatives/labels_softseg_bin/sub-beijingPrisma04/dwi/sub-beijingPrisma04_rec-average_dwi_softseg_bin.json new file mode 100644 index 0000000000..6846b7f869 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-beijingPrisma04/dwi/sub-beijingPrisma04_rec-average_dwi_softseg_bin.json @@ -0,0 +1,4 @@ +{ + "Author": "Sandrine Bedard", + "Date": "2022-10-22 14:36:05" +} \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-beijingPrisma04/dwi/sub-beijingPrisma04_rec-average_dwi_softseg_bin.nii.gz b/derivatives/labels_softseg_bin/sub-beijingPrisma04/dwi/sub-beijingPrisma04_rec-average_dwi_softseg_bin.nii.gz new file mode 100644 index 0000000000..42575ef155 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-beijingPrisma04/dwi/sub-beijingPrisma04_rec-average_dwi_softseg_bin.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s959--467afc73794e85bfe4ab91ce6a479106bea1558f71c034c53a2da2ba2312da53.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-beijingPrisma05/anat/sub-beijingPrisma05_flip-1_mt-on_space-other_MTS_softseg_bin.json 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b/derivatives/labels_softseg_bin/sub-beijingPrisma05/dwi/sub-beijingPrisma05_rec-average_dwi_softseg_bin.json @@ -0,0 +1,4 @@ +{ + "Author": "Sandrine Bedard", + "Date": "2022-10-22 14:36:05" +} \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-beijingPrisma05/dwi/sub-beijingPrisma05_rec-average_dwi_softseg_bin.nii.gz b/derivatives/labels_softseg_bin/sub-beijingPrisma05/dwi/sub-beijingPrisma05_rec-average_dwi_softseg_bin.nii.gz new file mode 100644 index 0000000000..363da4b9b1 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-beijingPrisma05/dwi/sub-beijingPrisma05_rec-average_dwi_softseg_bin.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s960--6cd36752f3e159fa2bc45188c59de0a8b213a514b5e11a00315d0d7ccccd92a4.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-brnoCeitec01/anat/sub-brnoCeitec01_flip-1_mt-on_space-other_MTS_softseg_bin.json b/derivatives/labels_softseg_bin/sub-brnoCeitec01/anat/sub-brnoCeitec01_flip-1_mt-on_space-other_MTS_softseg_bin.json 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b/derivatives/labels_softseg_bin/sub-brnoUhb01/anat/sub-brnoUhb01_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz new file mode 100644 index 0000000000..cb7af6d8ab --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-brnoUhb01/anat/sub-brnoUhb01_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s9701--836557843014cc7731b70e1a95f0e64635761189c93a1bc8acd7f1ac870e634e.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-brnoUhb01/anat/sub-brnoUhb01_flip-2_mt-off_space-other_MTS_softseg_bin.json b/derivatives/labels_softseg_bin/sub-brnoUhb01/anat/sub-brnoUhb01_flip-2_mt-off_space-other_MTS_softseg_bin.json new file mode 100644 index 0000000000..b8b40fdd0c --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-brnoUhb01/anat/sub-brnoUhb01_flip-2_mt-off_space-other_MTS_softseg_bin.json @@ -0,0 +1,4 @@ +{ + "Author": "Sandrine Bedard", + "Date": "2022-10-22 14:36:08" +} \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-brnoUhb01/anat/sub-brnoUhb01_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz b/derivatives/labels_softseg_bin/sub-brnoUhb01/anat/sub-brnoUhb01_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz new file mode 100644 index 0000000000..034c3316da --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-brnoUhb01/anat/sub-brnoUhb01_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s9583--cd4ad29302bbe179da6272ea56454eaa18acc70f1b29c66cac9e2de89e6c56a6.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-brnoUhb01/anat/sub-brnoUhb01_space-other_T1w_softseg_bin.json b/derivatives/labels_softseg_bin/sub-brnoUhb01/anat/sub-brnoUhb01_space-other_T1w_softseg_bin.json new file mode 100644 index 0000000000..b8b40fdd0c --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-brnoUhb01/anat/sub-brnoUhb01_space-other_T1w_softseg_bin.json @@ -0,0 +1,4 @@ +{ + "Author": "Sandrine Bedard", + "Date": "2022-10-22 14:36:08" +} \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-brnoUhb01/anat/sub-brnoUhb01_space-other_T1w_softseg_bin.nii.gz b/derivatives/labels_softseg_bin/sub-brnoUhb01/anat/sub-brnoUhb01_space-other_T1w_softseg_bin.nii.gz new file mode 100644 index 0000000000..8f84838039 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-brnoUhb01/anat/sub-brnoUhb01_space-other_T1w_softseg_bin.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s89679--83ba5d56513acfa4070af363577e5ba3144e2617625be0a23b9f093ab057b318.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-brnoUhb01/anat/sub-brnoUhb01_space-other_T2star_softseg_bin.json b/derivatives/labels_softseg_bin/sub-brnoUhb01/anat/sub-brnoUhb01_space-other_T2star_softseg_bin.json new file mode 100644 index 0000000000..b8b40fdd0c --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-brnoUhb01/anat/sub-brnoUhb01_space-other_T2star_softseg_bin.json @@ -0,0 +1,4 @@ +{ + "Author": "Sandrine Bedard", + "Date": "2022-10-22 14:36:08" +} \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-brnoUhb01/anat/sub-brnoUhb01_space-other_T2star_softseg_bin.nii.gz b/derivatives/labels_softseg_bin/sub-brnoUhb01/anat/sub-brnoUhb01_space-other_T2star_softseg_bin.nii.gz new file mode 100644 index 0000000000..6b0d82ebfc --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-brnoUhb01/anat/sub-brnoUhb01_space-other_T2star_softseg_bin.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s19026--a040478bcae3dd23f5c4694c9751e5fe920b5ba5c9ad838f1e810e5737c84286.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-brnoUhb01/anat/sub-brnoUhb01_space-other_T2w_softseg_bin.json b/derivatives/labels_softseg_bin/sub-brnoUhb01/anat/sub-brnoUhb01_space-other_T2w_softseg_bin.json new file mode 100644 index 0000000000..b8b40fdd0c --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-brnoUhb01/anat/sub-brnoUhb01_space-other_T2w_softseg_bin.json @@ -0,0 +1,4 @@ +{ + "Author": "Sandrine Bedard", + "Date": "2022-10-22 14:36:08" +} \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-brnoUhb01/anat/sub-brnoUhb01_space-other_T2w_softseg_bin.nii.gz b/derivatives/labels_softseg_bin/sub-brnoUhb01/anat/sub-brnoUhb01_space-other_T2w_softseg_bin.nii.gz new file mode 100644 index 0000000000..5b50467f5e --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-brnoUhb01/anat/sub-brnoUhb01_space-other_T2w_softseg_bin.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s33752--ccbed9b5d64f4e3e67510b1ed0253521faadd860f5d035137a78ad603904d63b.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-brnoUhb01/dwi/sub-brnoUhb01_rec-average_dwi_softseg_bin.json b/derivatives/labels_softseg_bin/sub-brnoUhb01/dwi/sub-brnoUhb01_rec-average_dwi_softseg_bin.json new file mode 100644 index 0000000000..b8b40fdd0c --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-brnoUhb01/dwi/sub-brnoUhb01_rec-average_dwi_softseg_bin.json @@ -0,0 +1,4 @@ +{ + "Author": "Sandrine Bedard", + "Date": "2022-10-22 14:36:08" +} \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-brnoUhb01/dwi/sub-brnoUhb01_rec-average_dwi_softseg_bin.nii.gz b/derivatives/labels_softseg_bin/sub-brnoUhb01/dwi/sub-brnoUhb01_rec-average_dwi_softseg_bin.nii.gz new file mode 100644 index 0000000000..6c0665a4de --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-brnoUhb01/dwi/sub-brnoUhb01_rec-average_dwi_softseg_bin.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s6440--70d0d678ff916e65540820665268bfa89e8010cc077a9374406bfc8bf3c43027.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-brnoUhb04/anat/sub-brnoUhb04_flip-1_mt-on_space-other_MTS_softseg_bin.json b/derivatives/labels_softseg_bin/sub-brnoUhb04/anat/sub-brnoUhb04_flip-1_mt-on_space-other_MTS_softseg_bin.json new file mode 100644 index 0000000000..eaac26b8cd --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-brnoUhb04/anat/sub-brnoUhb04_flip-1_mt-on_space-other_MTS_softseg_bin.json @@ -0,0 +1,4 @@ +{ + "Author": "Sandrine Bedard", + "Date": "2022-10-22 14:36:09" +} \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-brnoUhb04/anat/sub-brnoUhb04_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz b/derivatives/labels_softseg_bin/sub-brnoUhb04/anat/sub-brnoUhb04_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz new file mode 100644 index 0000000000..0d7f3e3cd3 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-brnoUhb04/anat/sub-brnoUhb04_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s9605--3ced91ea406634feeaade9c3d388238fb4aedcebc201785d32e64e796391b849.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-brnoUhb04/anat/sub-brnoUhb04_flip-2_mt-off_space-other_MTS_softseg_bin.json b/derivatives/labels_softseg_bin/sub-brnoUhb04/anat/sub-brnoUhb04_flip-2_mt-off_space-other_MTS_softseg_bin.json new file mode 100644 index 0000000000..eaac26b8cd --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-brnoUhb04/anat/sub-brnoUhb04_flip-2_mt-off_space-other_MTS_softseg_bin.json @@ -0,0 +1,4 @@ +{ + "Author": "Sandrine Bedard", + "Date": "2022-10-22 14:36:09" +} \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-brnoUhb04/anat/sub-brnoUhb04_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz b/derivatives/labels_softseg_bin/sub-brnoUhb04/anat/sub-brnoUhb04_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz new file mode 100644 index 0000000000..7f0434549a --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-brnoUhb04/anat/sub-brnoUhb04_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s9390--6d60aba2cd2a34e44c778685cca3850ff7662a375325358c21e0c741c6162848.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-brnoUhb04/anat/sub-brnoUhb04_space-other_T1w_softseg_bin.json b/derivatives/labels_softseg_bin/sub-brnoUhb04/anat/sub-brnoUhb04_space-other_T1w_softseg_bin.json new file mode 100644 index 0000000000..eaac26b8cd --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-brnoUhb04/anat/sub-brnoUhb04_space-other_T1w_softseg_bin.json @@ -0,0 +1,4 @@ +{ + "Author": "Sandrine Bedard", + "Date": "2022-10-22 14:36:09" +} \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-brnoUhb04/anat/sub-brnoUhb04_space-other_T1w_softseg_bin.nii.gz b/derivatives/labels_softseg_bin/sub-brnoUhb04/anat/sub-brnoUhb04_space-other_T1w_softseg_bin.nii.gz new file mode 100644 index 0000000000..c02430697d --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-brnoUhb04/anat/sub-brnoUhb04_space-other_T1w_softseg_bin.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s88888--788cc8cbc0bf80fb8f564ace2eea7430d5f278c4f49a5340c673ebe9202640b0.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-brnoUhb04/anat/sub-brnoUhb04_space-other_T2star_softseg_bin.json b/derivatives/labels_softseg_bin/sub-brnoUhb04/anat/sub-brnoUhb04_space-other_T2star_softseg_bin.json new file mode 100644 index 0000000000..eaac26b8cd --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-brnoUhb04/anat/sub-brnoUhb04_space-other_T2star_softseg_bin.json @@ -0,0 +1,4 @@ +{ + "Author": "Sandrine Bedard", + "Date": "2022-10-22 14:36:09" +} \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-brnoUhb04/anat/sub-brnoUhb04_space-other_T2star_softseg_bin.nii.gz b/derivatives/labels_softseg_bin/sub-brnoUhb04/anat/sub-brnoUhb04_space-other_T2star_softseg_bin.nii.gz new file mode 100644 index 0000000000..7cd02c87d1 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-brnoUhb04/anat/sub-brnoUhb04_space-other_T2star_softseg_bin.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s18973--3a0fcda784fcc7299f1e980eb42c63b88117ad5fa2fae2ec31c486ea631fad58.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-brnoUhb04/anat/sub-brnoUhb04_space-other_T2w_softseg_bin.json b/derivatives/labels_softseg_bin/sub-brnoUhb04/anat/sub-brnoUhb04_space-other_T2w_softseg_bin.json new file mode 100644 index 0000000000..eaac26b8cd --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-brnoUhb04/anat/sub-brnoUhb04_space-other_T2w_softseg_bin.json @@ -0,0 +1,4 @@ +{ + "Author": "Sandrine Bedard", + "Date": "2022-10-22 14:36:09" +} \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-brnoUhb04/anat/sub-brnoUhb04_space-other_T2w_softseg_bin.nii.gz b/derivatives/labels_softseg_bin/sub-brnoUhb04/anat/sub-brnoUhb04_space-other_T2w_softseg_bin.nii.gz new file mode 100644 index 0000000000..e11854da4a --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-brnoUhb04/anat/sub-brnoUhb04_space-other_T2w_softseg_bin.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s33110--d5e1b317bebdeebe60fdd25adeab1ef61d7d14d4940c05873d849ab63cc18a44.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-brnoUhb04/dwi/sub-brnoUhb04_rec-average_dwi_softseg_bin.json b/derivatives/labels_softseg_bin/sub-brnoUhb04/dwi/sub-brnoUhb04_rec-average_dwi_softseg_bin.json new file mode 100644 index 0000000000..eaac26b8cd --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-brnoUhb04/dwi/sub-brnoUhb04_rec-average_dwi_softseg_bin.json @@ -0,0 +1,4 @@ +{ + "Author": "Sandrine Bedard", + "Date": "2022-10-22 14:36:09" +} \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-brnoUhb04/dwi/sub-brnoUhb04_rec-average_dwi_softseg_bin.nii.gz b/derivatives/labels_softseg_bin/sub-brnoUhb04/dwi/sub-brnoUhb04_rec-average_dwi_softseg_bin.nii.gz new file mode 100644 index 0000000000..e1d355dfdf --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-brnoUhb04/dwi/sub-brnoUhb04_rec-average_dwi_softseg_bin.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s6293--01b68e27120ac06fa382827b0fc82509ddaa316f52448537d6b72dcfa727b5a7.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-brnoUhb05/anat/sub-brnoUhb05_flip-1_mt-on_space-other_MTS_softseg_bin.json b/derivatives/labels_softseg_bin/sub-brnoUhb05/anat/sub-brnoUhb05_flip-1_mt-on_space-other_MTS_softseg_bin.json new file mode 100644 index 0000000000..eaac26b8cd --- 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end of file diff --git a/derivatives/labels_softseg_bin/sub-cardiff02/anat/sub-cardiff02_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz b/derivatives/labels_softseg_bin/sub-cardiff02/anat/sub-cardiff02_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz new file mode 100644 index 0000000000..04e04929ec --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-cardiff02/anat/sub-cardiff02_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s7328--9eed28071ab84e78a913bc96cff3d12f43c1574ea6c71d2cdc716dd6c5a3affa.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-cardiff02/anat/sub-cardiff02_flip-2_mt-off_space-other_MTS_softseg_bin.json b/derivatives/labels_softseg_bin/sub-cardiff02/anat/sub-cardiff02_flip-2_mt-off_space-other_MTS_softseg_bin.json new file mode 100644 index 0000000000..5c91cc4892 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-cardiff02/anat/sub-cardiff02_flip-2_mt-off_space-other_MTS_softseg_bin.json @@ -0,0 +1,4 @@ +{ + "Author": "Sandrine Bedard", + "Date": "2022-10-22 14:36:10" +} \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-cardiff02/anat/sub-cardiff02_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz b/derivatives/labels_softseg_bin/sub-cardiff02/anat/sub-cardiff02_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz new file mode 100644 index 0000000000..fc7552e169 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-cardiff02/anat/sub-cardiff02_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s7225--c744bf8857fd850237424dd33f734400af51b2c49dad08414c41d473de3eea1f.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-cardiff02/anat/sub-cardiff02_space-other_T1w_softseg_bin.json b/derivatives/labels_softseg_bin/sub-cardiff02/anat/sub-cardiff02_space-other_T1w_softseg_bin.json new file mode 100644 index 0000000000..5c91cc4892 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-cardiff02/anat/sub-cardiff02_space-other_T1w_softseg_bin.json @@ -0,0 +1,4 @@ +{ + "Author": "Sandrine Bedard", + "Date": "2022-10-22 14:36:10" +} \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-cardiff02/anat/sub-cardiff02_space-other_T1w_softseg_bin.nii.gz b/derivatives/labels_softseg_bin/sub-cardiff02/anat/sub-cardiff02_space-other_T1w_softseg_bin.nii.gz new file mode 100644 index 0000000000..be5d0030bb --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-cardiff02/anat/sub-cardiff02_space-other_T1w_softseg_bin.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s75529--4aa740ac67cd6df0a9c2f8aa323fb266294caf2bea428d9fe91451c4b54eb1d0.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-cardiff02/anat/sub-cardiff02_space-other_T2star_softseg_bin.json b/derivatives/labels_softseg_bin/sub-cardiff02/anat/sub-cardiff02_space-other_T2star_softseg_bin.json new file mode 100644 index 0000000000..5c91cc4892 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-cardiff02/anat/sub-cardiff02_space-other_T2star_softseg_bin.json @@ -0,0 +1,4 @@ +{ + "Author": "Sandrine Bedard", + "Date": "2022-10-22 14:36:10" +} \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-cardiff02/anat/sub-cardiff02_space-other_T2star_softseg_bin.nii.gz b/derivatives/labels_softseg_bin/sub-cardiff02/anat/sub-cardiff02_space-other_T2star_softseg_bin.nii.gz new file mode 100644 index 0000000000..31fcc39a6d --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-cardiff02/anat/sub-cardiff02_space-other_T2star_softseg_bin.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s14863--4c32c953b042c042a695f437d9a8ccf96b78510d5ec45bcd5fc6b9c59b64849a.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-cardiff02/anat/sub-cardiff02_space-other_T2w_softseg_bin.json b/derivatives/labels_softseg_bin/sub-cardiff02/anat/sub-cardiff02_space-other_T2w_softseg_bin.json new file mode 100644 index 0000000000..5c91cc4892 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-cardiff02/anat/sub-cardiff02_space-other_T2w_softseg_bin.json @@ -0,0 +1,4 @@ +{ + "Author": "Sandrine Bedard", + "Date": "2022-10-22 14:36:10" +} \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-cardiff02/anat/sub-cardiff02_space-other_T2w_softseg_bin.nii.gz b/derivatives/labels_softseg_bin/sub-cardiff02/anat/sub-cardiff02_space-other_T2w_softseg_bin.nii.gz new file mode 100644 index 0000000000..0f7e18727b --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-cardiff02/anat/sub-cardiff02_space-other_T2w_softseg_bin.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s37625--1dc0992438b7904f60da62478df764f289bbca90215272122403ec6f381db4ab.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-cardiff02/dwi/sub-cardiff02_rec-average_dwi_softseg_bin.json b/derivatives/labels_softseg_bin/sub-cardiff02/dwi/sub-cardiff02_rec-average_dwi_softseg_bin.json new file mode 100644 index 0000000000..5c91cc4892 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-cardiff02/dwi/sub-cardiff02_rec-average_dwi_softseg_bin.json @@ -0,0 +1,4 @@ +{ + "Author": "Sandrine Bedard", + "Date": "2022-10-22 14:36:10" +} \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-cardiff02/dwi/sub-cardiff02_rec-average_dwi_softseg_bin.nii.gz b/derivatives/labels_softseg_bin/sub-cardiff02/dwi/sub-cardiff02_rec-average_dwi_softseg_bin.nii.gz new file mode 100644 index 0000000000..f478d58225 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-cardiff02/dwi/sub-cardiff02_rec-average_dwi_softseg_bin.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s1015--960f8d291495be89361ecde1251b0e463cf08229717c30d1f0fc1169eddac1c4.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-cardiff03/anat/sub-cardiff03_flip-1_mt-on_space-other_MTS_softseg_bin.json b/derivatives/labels_softseg_bin/sub-cardiff03/anat/sub-cardiff03_flip-1_mt-on_space-other_MTS_softseg_bin.json new file mode 100644 index 0000000000..5c91cc4892 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-cardiff03/anat/sub-cardiff03_flip-1_mt-on_space-other_MTS_softseg_bin.json @@ -0,0 +1,4 @@ +{ + "Author": "Sandrine Bedard", + "Date": "2022-10-22 14:36:10" +} \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-cardiff03/anat/sub-cardiff03_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz b/derivatives/labels_softseg_bin/sub-cardiff03/anat/sub-cardiff03_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz new file mode 100644 index 0000000000..4588f4839d --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-cardiff03/anat/sub-cardiff03_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s7319--e6d6dc5d40962cb5805bd5f9840154197ee1edfb62029824d925f0eaf7cbf89c.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-cardiff03/anat/sub-cardiff03_flip-2_mt-off_space-other_MTS_softseg_bin.json b/derivatives/labels_softseg_bin/sub-cardiff03/anat/sub-cardiff03_flip-2_mt-off_space-other_MTS_softseg_bin.json 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b/derivatives/labels_softseg_bin/sub-cardiff04/anat/sub-cardiff04_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s7239--5dd35c7bdecd03cb02535b3576520b739ed86c25fcd33ba80ade56adce2fc9c2.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-cardiff04/anat/sub-cardiff04_space-other_T1w_softseg_bin.json b/derivatives/labels_softseg_bin/sub-cardiff04/anat/sub-cardiff04_space-other_T1w_softseg_bin.json new file mode 100644 index 0000000000..1bcf4e0cb1 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-cardiff04/anat/sub-cardiff04_space-other_T1w_softseg_bin.json @@ -0,0 +1,4 @@ +{ + "Author": "Sandrine Bedard", + "Date": "2022-10-22 14:36:11" +} \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-cardiff04/anat/sub-cardiff04_space-other_T1w_softseg_bin.nii.gz b/derivatives/labels_softseg_bin/sub-cardiff04/anat/sub-cardiff04_space-other_T1w_softseg_bin.nii.gz new file mode 100644 index 0000000000..34bdb635da --- /dev/null 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b/derivatives/labels_softseg_bin/sub-cardiff04/dwi/sub-cardiff04_rec-average_dwi_softseg_bin.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s1035--f9f54cc30aa747ea258ee2015f1db9be8ea2a81e9c7bf16f50e856400d8416a7.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-cardiff05/anat/sub-cardiff05_flip-1_mt-on_space-other_MTS_softseg_bin.json b/derivatives/labels_softseg_bin/sub-cardiff05/anat/sub-cardiff05_flip-1_mt-on_space-other_MTS_softseg_bin.json new file mode 100644 index 0000000000..1bcf4e0cb1 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-cardiff05/anat/sub-cardiff05_flip-1_mt-on_space-other_MTS_softseg_bin.json @@ -0,0 +1,4 @@ +{ + "Author": "Sandrine Bedard", + "Date": "2022-10-22 14:36:11" +} \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-cardiff05/anat/sub-cardiff05_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz b/derivatives/labels_softseg_bin/sub-cardiff05/anat/sub-cardiff05_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz new file mode 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a/derivatives/labels_softseg_bin/sub-cardiff05/anat/sub-cardiff05_space-other_T1w_softseg_bin.nii.gz b/derivatives/labels_softseg_bin/sub-cardiff05/anat/sub-cardiff05_space-other_T1w_softseg_bin.nii.gz new file mode 100644 index 0000000000..83a27d4f08 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-cardiff05/anat/sub-cardiff05_space-other_T1w_softseg_bin.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s75122--ca75d45ad20d67dc63d20505a50f885af9a51bf2a23cbcbd7789413cb00b6ffe.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-cardiff05/anat/sub-cardiff05_space-other_T2star_softseg_bin.json b/derivatives/labels_softseg_bin/sub-cardiff05/anat/sub-cardiff05_space-other_T2star_softseg_bin.json new file mode 100644 index 0000000000..1bcf4e0cb1 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-cardiff05/anat/sub-cardiff05_space-other_T2star_softseg_bin.json @@ -0,0 +1,4 @@ +{ + "Author": "Sandrine Bedard", + "Date": "2022-10-22 14:36:11" +} \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-cardiff05/anat/sub-cardiff05_space-other_T2star_softseg_bin.nii.gz b/derivatives/labels_softseg_bin/sub-cardiff05/anat/sub-cardiff05_space-other_T2star_softseg_bin.nii.gz new file mode 100644 index 0000000000..9ccfb5fcfe --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-cardiff05/anat/sub-cardiff05_space-other_T2star_softseg_bin.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s14769--497270aa12604bba999b92ce35749e9f3b8fb5638fce730e8fbaaa1a00c5b9aa.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-cardiff05/anat/sub-cardiff05_space-other_T2w_softseg_bin.json b/derivatives/labels_softseg_bin/sub-cardiff05/anat/sub-cardiff05_space-other_T2w_softseg_bin.json new file mode 100644 index 0000000000..1bcf4e0cb1 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-cardiff05/anat/sub-cardiff05_space-other_T2w_softseg_bin.json @@ -0,0 +1,4 @@ +{ + "Author": "Sandrine Bedard", + "Date": "2022-10-22 14:36:11" +} \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-cardiff05/anat/sub-cardiff05_space-other_T2w_softseg_bin.nii.gz b/derivatives/labels_softseg_bin/sub-cardiff05/anat/sub-cardiff05_space-other_T2w_softseg_bin.nii.gz new file mode 100644 index 0000000000..df8518e164 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-cardiff05/anat/sub-cardiff05_space-other_T2w_softseg_bin.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s36600--4938ba3b189017d947ce718694d706f569c0904bca41be35b03c6498bcbc7186.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-cardiff05/dwi/sub-cardiff05_rec-average_dwi_softseg_bin.json b/derivatives/labels_softseg_bin/sub-cardiff05/dwi/sub-cardiff05_rec-average_dwi_softseg_bin.json new file mode 100644 index 0000000000..1bcf4e0cb1 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-cardiff05/dwi/sub-cardiff05_rec-average_dwi_softseg_bin.json @@ -0,0 +1,4 @@ +{ + "Author": "Sandrine Bedard", + "Date": "2022-10-22 14:36:11" +} \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-cardiff05/dwi/sub-cardiff05_rec-average_dwi_softseg_bin.nii.gz b/derivatives/labels_softseg_bin/sub-cardiff05/dwi/sub-cardiff05_rec-average_dwi_softseg_bin.nii.gz new file mode 100644 index 0000000000..76302741ce --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-cardiff05/dwi/sub-cardiff05_rec-average_dwi_softseg_bin.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s1005--867465967f642b163487c31f5eadcbdeb0dfaf1d3980492358b36fa9c7b397b1.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-cardiff06/anat/sub-cardiff06_flip-1_mt-on_space-other_MTS_softseg_bin.json b/derivatives/labels_softseg_bin/sub-cardiff06/anat/sub-cardiff06_flip-1_mt-on_space-other_MTS_softseg_bin.json new file mode 100644 index 0000000000..1bcf4e0cb1 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-cardiff06/anat/sub-cardiff06_flip-1_mt-on_space-other_MTS_softseg_bin.json @@ -0,0 +1,4 @@ +{ + "Author": "Sandrine Bedard", + "Date": "2022-10-22 14:36:11" +} \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-cardiff06/anat/sub-cardiff06_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz b/derivatives/labels_softseg_bin/sub-cardiff06/anat/sub-cardiff06_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz new file mode 100644 index 0000000000..55bd768b5b --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-cardiff06/anat/sub-cardiff06_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s7326--e1601f6989f65ddd4448385620ac90c557d071d3991bf66827421b3e2ffcb940.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-cardiff06/anat/sub-cardiff06_flip-2_mt-off_space-other_MTS_softseg_bin.json b/derivatives/labels_softseg_bin/sub-cardiff06/anat/sub-cardiff06_flip-2_mt-off_space-other_MTS_softseg_bin.json new file mode 100644 index 0000000000..1bcf4e0cb1 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-cardiff06/anat/sub-cardiff06_flip-2_mt-off_space-other_MTS_softseg_bin.json @@ -0,0 +1,4 @@ +{ + "Author": "Sandrine Bedard", + "Date": "2022-10-22 14:36:11" +} \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-cardiff06/anat/sub-cardiff06_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz b/derivatives/labels_softseg_bin/sub-cardiff06/anat/sub-cardiff06_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz new file mode 100644 index 0000000000..bda4b0a448 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-cardiff06/anat/sub-cardiff06_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s7217--229a71c40fe65ec8407114e4e7a4e200e7580b9466b863fb608878091c19c764.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-cardiff06/anat/sub-cardiff06_space-other_T1w_softseg_bin.json b/derivatives/labels_softseg_bin/sub-cardiff06/anat/sub-cardiff06_space-other_T1w_softseg_bin.json new file mode 100644 index 0000000000..1bcf4e0cb1 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-cardiff06/anat/sub-cardiff06_space-other_T1w_softseg_bin.json @@ -0,0 +1,4 @@ +{ + "Author": "Sandrine Bedard", + "Date": "2022-10-22 14:36:11" +} \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-cardiff06/anat/sub-cardiff06_space-other_T1w_softseg_bin.nii.gz b/derivatives/labels_softseg_bin/sub-cardiff06/anat/sub-cardiff06_space-other_T1w_softseg_bin.nii.gz new file mode 100644 index 0000000000..b0d839aba5 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-cardiff06/anat/sub-cardiff06_space-other_T1w_softseg_bin.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s75177--1ea12860e184916e13f4a598308d0f01b592461e05e10ccc2fe245d64d9761b9.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-cardiff06/anat/sub-cardiff06_space-other_T2star_softseg_bin.json b/derivatives/labels_softseg_bin/sub-cardiff06/anat/sub-cardiff06_space-other_T2star_softseg_bin.json new file mode 100644 index 0000000000..1bcf4e0cb1 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-cardiff06/anat/sub-cardiff06_space-other_T2star_softseg_bin.json @@ -0,0 +1,4 @@ +{ + "Author": "Sandrine Bedard", + "Date": "2022-10-22 14:36:11" +} \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-cardiff06/anat/sub-cardiff06_space-other_T2star_softseg_bin.nii.gz b/derivatives/labels_softseg_bin/sub-cardiff06/anat/sub-cardiff06_space-other_T2star_softseg_bin.nii.gz new file mode 100644 index 0000000000..fea487e984 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-cardiff06/anat/sub-cardiff06_space-other_T2star_softseg_bin.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s14713--9713080085c8d3358ed4072b4334c55113895b920ae4e3a36933fadeaf0e5fda.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-cardiff06/anat/sub-cardiff06_space-other_T2w_softseg_bin.json b/derivatives/labels_softseg_bin/sub-cardiff06/anat/sub-cardiff06_space-other_T2w_softseg_bin.json new file mode 100644 index 0000000000..1bcf4e0cb1 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-cardiff06/anat/sub-cardiff06_space-other_T2w_softseg_bin.json @@ -0,0 +1,4 @@ +{ + "Author": "Sandrine Bedard", + "Date": "2022-10-22 14:36:11" +} \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-cardiff06/anat/sub-cardiff06_space-other_T2w_softseg_bin.nii.gz b/derivatives/labels_softseg_bin/sub-cardiff06/anat/sub-cardiff06_space-other_T2w_softseg_bin.nii.gz new file mode 100644 index 0000000000..87ef7d0d3f --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-cardiff06/anat/sub-cardiff06_space-other_T2w_softseg_bin.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s37676--8fe778e5096af0dfe29a5d7def1dd991e3c0bce0085960a750fbd83fad4ecf81.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-cardiff06/dwi/sub-cardiff06_rec-average_dwi_softseg_bin.json b/derivatives/labels_softseg_bin/sub-cardiff06/dwi/sub-cardiff06_rec-average_dwi_softseg_bin.json new file mode 100644 index 0000000000..1bcf4e0cb1 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-cardiff06/dwi/sub-cardiff06_rec-average_dwi_softseg_bin.json @@ -0,0 +1,4 @@ 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-0,0 +1,4 @@ +{ + "Author": "Sandrine Bedard", + "Date": "2022-10-22 14:36:11" +} \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-cmrra01/anat/sub-cmrra01_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz b/derivatives/labels_softseg_bin/sub-cmrra01/anat/sub-cmrra01_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz new file mode 100644 index 0000000000..382f22e6cc --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-cmrra01/anat/sub-cmrra01_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s7266--5867f5310a9317ff7751d191ef776b9d4eb7d890d57193b2c7ab6d0c0e17e8bb.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-cmrra01/anat/sub-cmrra01_flip-2_mt-off_space-other_MTS_softseg_bin.json b/derivatives/labels_softseg_bin/sub-cmrra01/anat/sub-cmrra01_flip-2_mt-off_space-other_MTS_softseg_bin.json new file mode 100644 index 0000000000..1bcf4e0cb1 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-cmrra01/anat/sub-cmrra01_flip-2_mt-off_space-other_MTS_softseg_bin.json @@ -0,0 +1,4 @@ +{ + "Author": "Sandrine Bedard", + "Date": "2022-10-22 14:36:11" +} \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-cmrra01/anat/sub-cmrra01_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz b/derivatives/labels_softseg_bin/sub-cmrra01/anat/sub-cmrra01_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz new file mode 100644 index 0000000000..e3b5369abb --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-cmrra01/anat/sub-cmrra01_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s7262--6ee0c5661f8ee14c3a0e9199a960ad535f971e8e4859135539cbbf6d60741aac.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-cmrra01/anat/sub-cmrra01_space-other_T1w_softseg_bin.json b/derivatives/labels_softseg_bin/sub-cmrra01/anat/sub-cmrra01_space-other_T1w_softseg_bin.json new file mode 100644 index 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b/derivatives/labels_softseg_bin/sub-cmrra01/anat/sub-cmrra01_space-other_T2w_softseg_bin.json @@ -0,0 +1,4 @@ +{ + "Author": "Sandrine Bedard", + "Date": "2022-10-22 14:36:12" +} \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-cmrra01/anat/sub-cmrra01_space-other_T2w_softseg_bin.nii.gz b/derivatives/labels_softseg_bin/sub-cmrra01/anat/sub-cmrra01_space-other_T2w_softseg_bin.nii.gz new file mode 100644 index 0000000000..bfe36ed73d --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-cmrra01/anat/sub-cmrra01_space-other_T2w_softseg_bin.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s36928--798bb4285f1e992d2a5ca66d4ab2fce7c169c644e4985f30f5af499f58b09b59.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-cmrra01/dwi/sub-cmrra01_rec-average_dwi_softseg_bin.json b/derivatives/labels_softseg_bin/sub-cmrra01/dwi/sub-cmrra01_rec-average_dwi_softseg_bin.json new file mode 100644 index 0000000000..908d970611 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-cmrra01/dwi/sub-cmrra01_rec-average_dwi_softseg_bin.json @@ -0,0 +1,4 @@ +{ + "Author": "Sandrine Bedard", + "Date": "2022-10-22 14:36:12" +} \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-cmrra01/dwi/sub-cmrra01_rec-average_dwi_softseg_bin.nii.gz b/derivatives/labels_softseg_bin/sub-cmrra01/dwi/sub-cmrra01_rec-average_dwi_softseg_bin.nii.gz new file mode 100644 index 0000000000..07053ae5b7 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-cmrra01/dwi/sub-cmrra01_rec-average_dwi_softseg_bin.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s991--8b375e60eb0f04c0991557093befe57519fa7e17cb618bf77fdf97e0332428c8.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-cmrra02/anat/sub-cmrra02_flip-1_mt-on_space-other_MTS_softseg_bin.json b/derivatives/labels_softseg_bin/sub-cmrra02/anat/sub-cmrra02_flip-1_mt-on_space-other_MTS_softseg_bin.json new file mode 100644 index 0000000000..908d970611 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-cmrra02/anat/sub-cmrra02_flip-1_mt-on_space-other_MTS_softseg_bin.json @@ -0,0 +1,4 @@ +{ + "Author": "Sandrine Bedard", + "Date": "2022-10-22 14:36:12" +} \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-cmrra02/anat/sub-cmrra02_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz b/derivatives/labels_softseg_bin/sub-cmrra02/anat/sub-cmrra02_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz new file mode 100644 index 0000000000..697c644402 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-cmrra02/anat/sub-cmrra02_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s7378--ff4fe5e61652453fddd0ed857dbb24674c9eb43ef482219d82370751d8481cc3.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-cmrra02/anat/sub-cmrra02_flip-2_mt-off_space-other_MTS_softseg_bin.json b/derivatives/labels_softseg_bin/sub-cmrra02/anat/sub-cmrra02_flip-2_mt-off_space-other_MTS_softseg_bin.json new file mode 100644 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b/derivatives/labels_softseg_bin/sub-cmrra02/dwi/sub-cmrra02_rec-average_dwi_softseg_bin.json @@ -0,0 +1,4 @@ +{ + "Author": "Sandrine Bedard", + "Date": "2022-10-22 14:36:12" +} \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-cmrra02/dwi/sub-cmrra02_rec-average_dwi_softseg_bin.nii.gz b/derivatives/labels_softseg_bin/sub-cmrra02/dwi/sub-cmrra02_rec-average_dwi_softseg_bin.nii.gz new file mode 100644 index 0000000000..9635582bd1 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-cmrra02/dwi/sub-cmrra02_rec-average_dwi_softseg_bin.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s1038--eecbb5e93640b75ed826ebdd9d5d03ca69ff42ace5131ab0fb464ecf2d7eb1e9.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-cmrra03/anat/sub-cmrra03_flip-1_mt-on_space-other_MTS_softseg_bin.json b/derivatives/labels_softseg_bin/sub-cmrra03/anat/sub-cmrra03_flip-1_mt-on_space-other_MTS_softseg_bin.json new file mode 100644 index 0000000000..908d970611 --- /dev/null +++ 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b/derivatives/labels_softseg_bin/sub-cmrra03/dwi/sub-cmrra03_rec-average_dwi_softseg_bin.json @@ -0,0 +1,4 @@ +{ + "Author": "Sandrine Bedard", + "Date": "2022-10-22 14:36:12" +} \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-cmrra03/dwi/sub-cmrra03_rec-average_dwi_softseg_bin.nii.gz b/derivatives/labels_softseg_bin/sub-cmrra03/dwi/sub-cmrra03_rec-average_dwi_softseg_bin.nii.gz new file mode 100644 index 0000000000..ac957f6d66 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-cmrra03/dwi/sub-cmrra03_rec-average_dwi_softseg_bin.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s975--fcd6d55fbf35f7a0df328fcd2eb1027fcc66f7298d8225904216194e43c62af4.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-cmrra04/anat/sub-cmrra04_flip-1_mt-on_space-other_MTS_softseg_bin.json b/derivatives/labels_softseg_bin/sub-cmrra04/anat/sub-cmrra04_flip-1_mt-on_space-other_MTS_softseg_bin.json new file mode 100644 index 0000000000..908d970611 --- /dev/null +++ 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b/derivatives/labels_softseg_bin/sub-fslAchieva01/anat/sub-fslAchieva01_space-other_T2w_softseg_bin.json @@ -0,0 +1,4 @@ +{ + "Author": "Sandrine Bedard", + "Date": "2022-10-22 14:36:15" +} \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-fslAchieva01/anat/sub-fslAchieva01_space-other_T2w_softseg_bin.nii.gz b/derivatives/labels_softseg_bin/sub-fslAchieva01/anat/sub-fslAchieva01_space-other_T2w_softseg_bin.nii.gz new file mode 100644 index 0000000000..f9ea43439a --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-fslAchieva01/anat/sub-fslAchieva01_space-other_T2w_softseg_bin.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s36379--7f3a7274733d0a205ba139577d187ccf9da953277f110285bb1715de219b331e.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-fslAchieva01/dwi/sub-fslAchieva01_rec-average_dwi_softseg_bin.json b/derivatives/labels_softseg_bin/sub-fslAchieva01/dwi/sub-fslAchieva01_rec-average_dwi_softseg_bin.json new file mode 100644 index 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b/derivatives/labels_softseg_bin/sub-fslAchieva02/anat/sub-fslAchieva02_space-other_T1w_softseg_bin.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s91200--9ab69903e28633b26dad1c4f92f78d4324746526364e291034555f491ada4d47.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-fslAchieva02/anat/sub-fslAchieva02_space-other_T2star_softseg_bin.json b/derivatives/labels_softseg_bin/sub-fslAchieva02/anat/sub-fslAchieva02_space-other_T2star_softseg_bin.json new file mode 100644 index 0000000000..0ca96228a3 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-fslAchieva02/anat/sub-fslAchieva02_space-other_T2star_softseg_bin.json @@ -0,0 +1,4 @@ +{ + "Author": "Sandrine Bedard", + "Date": "2022-10-22 14:36:16" +} \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-fslAchieva02/anat/sub-fslAchieva02_space-other_T2star_softseg_bin.nii.gz b/derivatives/labels_softseg_bin/sub-fslAchieva02/anat/sub-fslAchieva02_space-other_T2star_softseg_bin.nii.gz new file mode 100644 index 0000000000..8171a33c8f --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-fslAchieva02/anat/sub-fslAchieva02_space-other_T2star_softseg_bin.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s8051--2a6e66d47bbe25d964f9f806b129f2102e35379e0f377e6bff237c63b5498d3e.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-fslAchieva02/anat/sub-fslAchieva02_space-other_T2w_softseg_bin.json b/derivatives/labels_softseg_bin/sub-fslAchieva02/anat/sub-fslAchieva02_space-other_T2w_softseg_bin.json new file mode 100644 index 0000000000..0ca96228a3 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-fslAchieva02/anat/sub-fslAchieva02_space-other_T2w_softseg_bin.json @@ -0,0 +1,4 @@ +{ + "Author": "Sandrine Bedard", + "Date": "2022-10-22 14:36:16" +} \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-fslAchieva02/anat/sub-fslAchieva02_space-other_T2w_softseg_bin.nii.gz b/derivatives/labels_softseg_bin/sub-fslAchieva02/anat/sub-fslAchieva02_space-other_T2w_softseg_bin.nii.gz new file mode 100644 index 0000000000..a6818d6a09 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-fslAchieva02/anat/sub-fslAchieva02_space-other_T2w_softseg_bin.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s36437--8a426768efca89b270a1198d7c70b6bd147b50a2bd4ffe67ea32641c64085dce.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-fslAchieva02/dwi/sub-fslAchieva02_rec-average_dwi_softseg_bin.json b/derivatives/labels_softseg_bin/sub-fslAchieva02/dwi/sub-fslAchieva02_rec-average_dwi_softseg_bin.json new file mode 100644 index 0000000000..0ca96228a3 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-fslAchieva02/dwi/sub-fslAchieva02_rec-average_dwi_softseg_bin.json @@ -0,0 +1,4 @@ +{ + "Author": "Sandrine Bedard", + "Date": "2022-10-22 14:36:16" +} \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-fslAchieva02/dwi/sub-fslAchieva02_rec-average_dwi_softseg_bin.nii.gz b/derivatives/labels_softseg_bin/sub-fslAchieva02/dwi/sub-fslAchieva02_rec-average_dwi_softseg_bin.nii.gz new file mode 100644 index 0000000000..a20d3dc54a --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-fslAchieva02/dwi/sub-fslAchieva02_rec-average_dwi_softseg_bin.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s986--85677128d6ba4f2ff80999bf48d08d2e73e6492e795120f8868f22d7b6fd456d.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-fslAchieva03/anat/sub-fslAchieva03_flip-1_mt-on_space-other_MTS_softseg_bin.json b/derivatives/labels_softseg_bin/sub-fslAchieva03/anat/sub-fslAchieva03_flip-1_mt-on_space-other_MTS_softseg_bin.json new file mode 100644 index 0000000000..0ca96228a3 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-fslAchieva03/anat/sub-fslAchieva03_flip-1_mt-on_space-other_MTS_softseg_bin.json @@ -0,0 +1,4 @@ +{ + "Author": "Sandrine Bedard", + "Date": "2022-10-22 14:36:16" +} \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-fslAchieva03/anat/sub-fslAchieva03_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz b/derivatives/labels_softseg_bin/sub-fslAchieva03/anat/sub-fslAchieva03_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz new file mode 100644 index 0000000000..ccf097819d --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-fslAchieva03/anat/sub-fslAchieva03_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s7307--df7ba8843022b97d7d35b5b32679b999336f13da135cd89e3aca5e3a9b2511ac.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-fslAchieva03/anat/sub-fslAchieva03_flip-2_mt-off_space-other_MTS_softseg_bin.json b/derivatives/labels_softseg_bin/sub-fslAchieva03/anat/sub-fslAchieva03_flip-2_mt-off_space-other_MTS_softseg_bin.json new file mode 100644 index 0000000000..0ca96228a3 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-fslAchieva03/anat/sub-fslAchieva03_flip-2_mt-off_space-other_MTS_softseg_bin.json @@ -0,0 +1,4 @@ +{ + "Author": "Sandrine Bedard", + "Date": "2022-10-22 14:36:16" +} \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-fslAchieva03/anat/sub-fslAchieva03_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz b/derivatives/labels_softseg_bin/sub-fslAchieva03/anat/sub-fslAchieva03_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz new file mode 100644 index 0000000000..82fd90552a --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-fslAchieva03/anat/sub-fslAchieva03_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s7148--44fb63362876c9ef289c58a864c5b0ed39cb892efe851adeaeca047d759ec517.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-fslAchieva03/anat/sub-fslAchieva03_space-other_T1w_softseg_bin.json b/derivatives/labels_softseg_bin/sub-fslAchieva03/anat/sub-fslAchieva03_space-other_T1w_softseg_bin.json new file mode 100644 index 0000000000..0ca96228a3 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-fslAchieva03/anat/sub-fslAchieva03_space-other_T1w_softseg_bin.json @@ -0,0 +1,4 @@ +{ + "Author": "Sandrine Bedard", + "Date": "2022-10-22 14:36:16" +} \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-fslAchieva03/anat/sub-fslAchieva03_space-other_T1w_softseg_bin.nii.gz b/derivatives/labels_softseg_bin/sub-fslAchieva03/anat/sub-fslAchieva03_space-other_T1w_softseg_bin.nii.gz new file mode 100644 index 0000000000..274ab9f885 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-fslAchieva03/anat/sub-fslAchieva03_space-other_T1w_softseg_bin.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s90678--a5faf6273dc29ad460d7afe0bd8c67bd7c865a236f8a9d4f737c4efe9256fcca.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-fslAchieva03/anat/sub-fslAchieva03_space-other_T2star_softseg_bin.json b/derivatives/labels_softseg_bin/sub-fslAchieva03/anat/sub-fslAchieva03_space-other_T2star_softseg_bin.json new file mode 100644 index 0000000000..0ca96228a3 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-fslAchieva03/anat/sub-fslAchieva03_space-other_T2star_softseg_bin.json @@ -0,0 +1,4 @@ +{ + "Author": "Sandrine Bedard", + "Date": "2022-10-22 14:36:16" +} \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-fslAchieva03/anat/sub-fslAchieva03_space-other_T2star_softseg_bin.nii.gz b/derivatives/labels_softseg_bin/sub-fslAchieva03/anat/sub-fslAchieva03_space-other_T2star_softseg_bin.nii.gz new file mode 100644 index 0000000000..a64772835e --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-fslAchieva03/anat/sub-fslAchieva03_space-other_T2star_softseg_bin.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s8066--c0273984091dcb9992513150791c8db5a427f82ff3ada33c95ce5e9bd4fa66e7.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-fslAchieva03/anat/sub-fslAchieva03_space-other_T2w_softseg_bin.json b/derivatives/labels_softseg_bin/sub-fslAchieva03/anat/sub-fslAchieva03_space-other_T2w_softseg_bin.json new file mode 100644 index 0000000000..0ca96228a3 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-fslAchieva03/anat/sub-fslAchieva03_space-other_T2w_softseg_bin.json @@ -0,0 +1,4 @@ +{ + "Author": "Sandrine Bedard", + "Date": "2022-10-22 14:36:16" +} \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-fslAchieva03/anat/sub-fslAchieva03_space-other_T2w_softseg_bin.nii.gz b/derivatives/labels_softseg_bin/sub-fslAchieva03/anat/sub-fslAchieva03_space-other_T2w_softseg_bin.nii.gz new file mode 100644 index 0000000000..18351b6769 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-fslAchieva03/anat/sub-fslAchieva03_space-other_T2w_softseg_bin.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s35364--b926fb5ab831a30b51f7812c46cc07b9ab9353f8529d96dc1b92a5ed59523f7c.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-fslAchieva03/dwi/sub-fslAchieva03_rec-average_dwi_softseg_bin.json b/derivatives/labels_softseg_bin/sub-fslAchieva03/dwi/sub-fslAchieva03_rec-average_dwi_softseg_bin.json new file mode 100644 index 0000000000..0ca96228a3 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-fslAchieva03/dwi/sub-fslAchieva03_rec-average_dwi_softseg_bin.json @@ -0,0 +1,4 @@ +{ + "Author": "Sandrine Bedard", + "Date": "2022-10-22 14:36:16" +} \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-fslAchieva03/dwi/sub-fslAchieva03_rec-average_dwi_softseg_bin.nii.gz b/derivatives/labels_softseg_bin/sub-fslAchieva03/dwi/sub-fslAchieva03_rec-average_dwi_softseg_bin.nii.gz new file mode 100644 index 0000000000..93cb9d54d0 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-fslAchieva03/dwi/sub-fslAchieva03_rec-average_dwi_softseg_bin.nii.gz @@ -0,0 +1 @@ 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b/derivatives/labels_softseg_bin/sub-fslAchieva04/anat/sub-fslAchieva04_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s7442--fe12570b906fdf86d9a61320dde37d6fe404e4e32317ec527275829ad3e803bb.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-fslAchieva04/anat/sub-fslAchieva04_flip-2_mt-off_space-other_MTS_softseg_bin.json b/derivatives/labels_softseg_bin/sub-fslAchieva04/anat/sub-fslAchieva04_flip-2_mt-off_space-other_MTS_softseg_bin.json new file mode 100644 index 0000000000..0ca96228a3 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-fslAchieva04/anat/sub-fslAchieva04_flip-2_mt-off_space-other_MTS_softseg_bin.json @@ -0,0 +1,4 @@ +{ + "Author": "Sandrine Bedard", + "Date": "2022-10-22 14:36:16" +} \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-fslAchieva04/anat/sub-fslAchieva04_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz b/derivatives/labels_softseg_bin/sub-fslAchieva04/anat/sub-fslAchieva04_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz new file mode 100644 index 0000000000..e3ac080e07 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-fslAchieva04/anat/sub-fslAchieva04_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s7117--d7ccefc3bd01d0155815e5bd36a62ab83a4250d53e676715bb97ccff5587fc45.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-fslAchieva04/anat/sub-fslAchieva04_space-other_T1w_softseg_bin.json b/derivatives/labels_softseg_bin/sub-fslAchieva04/anat/sub-fslAchieva04_space-other_T1w_softseg_bin.json new file mode 100644 index 0000000000..0ca96228a3 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-fslAchieva04/anat/sub-fslAchieva04_space-other_T1w_softseg_bin.json @@ -0,0 +1,4 @@ +{ + "Author": "Sandrine Bedard", + "Date": "2022-10-22 14:36:16" +} \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-fslAchieva04/anat/sub-fslAchieva04_space-other_T1w_softseg_bin.nii.gz b/derivatives/labels_softseg_bin/sub-fslAchieva04/anat/sub-fslAchieva04_space-other_T1w_softseg_bin.nii.gz new file mode 100644 index 0000000000..6020dd6bb2 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-fslAchieva04/anat/sub-fslAchieva04_space-other_T1w_softseg_bin.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s91318--de9fec1b958a2cd241fc9b252f94aa6ffd666b56e6d9ec09f2d5b073a2651b2a.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-fslAchieva04/anat/sub-fslAchieva04_space-other_T2star_softseg_bin.json b/derivatives/labels_softseg_bin/sub-fslAchieva04/anat/sub-fslAchieva04_space-other_T2star_softseg_bin.json new file mode 100644 index 0000000000..0ca96228a3 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-fslAchieva04/anat/sub-fslAchieva04_space-other_T2star_softseg_bin.json @@ -0,0 +1,4 @@ +{ + "Author": "Sandrine Bedard", + "Date": "2022-10-22 14:36:16" +} \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-fslAchieva04/anat/sub-fslAchieva04_space-other_T2star_softseg_bin.nii.gz b/derivatives/labels_softseg_bin/sub-fslAchieva04/anat/sub-fslAchieva04_space-other_T2star_softseg_bin.nii.gz new file mode 100644 index 0000000000..d5c7b86963 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-fslAchieva04/anat/sub-fslAchieva04_space-other_T2star_softseg_bin.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s8142--97edd77461224d8257083f4f907ee756f1776883bbe36351e39e092c615fc095.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-fslAchieva04/anat/sub-fslAchieva04_space-other_T2w_softseg_bin.json b/derivatives/labels_softseg_bin/sub-fslAchieva04/anat/sub-fslAchieva04_space-other_T2w_softseg_bin.json new file mode 100644 index 0000000000..0ca96228a3 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-fslAchieva04/anat/sub-fslAchieva04_space-other_T2w_softseg_bin.json @@ -0,0 +1,4 @@ +{ + "Author": "Sandrine Bedard", + "Date": "2022-10-22 14:36:16" +} \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-fslAchieva04/anat/sub-fslAchieva04_space-other_T2w_softseg_bin.nii.gz b/derivatives/labels_softseg_bin/sub-fslAchieva04/anat/sub-fslAchieva04_space-other_T2w_softseg_bin.nii.gz new file mode 100644 index 0000000000..1d5b089a38 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-fslAchieva04/anat/sub-fslAchieva04_space-other_T2w_softseg_bin.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s36414--af54463e82f47c6351639114511f85273f47a100dbf879f912d57624446b382e.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-fslAchieva04/dwi/sub-fslAchieva04_rec-average_dwi_softseg_bin.json b/derivatives/labels_softseg_bin/sub-fslAchieva04/dwi/sub-fslAchieva04_rec-average_dwi_softseg_bin.json new file mode 100644 index 0000000000..0ca96228a3 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-fslAchieva04/dwi/sub-fslAchieva04_rec-average_dwi_softseg_bin.json @@ -0,0 +1,4 @@ +{ + "Author": 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a/derivatives/labels_softseg_bin/sub-geneva03/anat/sub-geneva03_space-other_T1w_softseg_bin.nii.gz b/derivatives/labels_softseg_bin/sub-geneva03/anat/sub-geneva03_space-other_T1w_softseg_bin.nii.gz new file mode 100644 index 0000000000..a97d9de23f --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-geneva03/anat/sub-geneva03_space-other_T1w_softseg_bin.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s75389--9322983037d169e7ea9fb0ea3d47bb3291274b9eb25ab5f83ea4911ec870234e.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-geneva03/anat/sub-geneva03_space-other_T2star_softseg_bin.json b/derivatives/labels_softseg_bin/sub-geneva03/anat/sub-geneva03_space-other_T2star_softseg_bin.json new file mode 100644 index 0000000000..0342cc4364 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-geneva03/anat/sub-geneva03_space-other_T2star_softseg_bin.json @@ -0,0 +1,4 @@ +{ + "Author": "Sandrine Bedard", + "Date": "2022-10-22 14:36:19" +} \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-geneva03/anat/sub-geneva03_space-other_T2star_softseg_bin.nii.gz b/derivatives/labels_softseg_bin/sub-geneva03/anat/sub-geneva03_space-other_T2star_softseg_bin.nii.gz new file mode 100644 index 0000000000..cf4b4eae2d --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-geneva03/anat/sub-geneva03_space-other_T2star_softseg_bin.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s14706--2e62e39bc7c2140c0e7ab45401e80c16f35c75d75dc53006d3522f0569b3e6ee.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-geneva03/anat/sub-geneva03_space-other_T2w_softseg_bin.json b/derivatives/labels_softseg_bin/sub-geneva03/anat/sub-geneva03_space-other_T2w_softseg_bin.json new file mode 100644 index 0000000000..0342cc4364 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-geneva03/anat/sub-geneva03_space-other_T2w_softseg_bin.json @@ -0,0 +1,4 @@ +{ + "Author": "Sandrine Bedard", + "Date": "2022-10-22 14:36:19" +} \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-geneva03/anat/sub-geneva03_space-other_T2w_softseg_bin.nii.gz b/derivatives/labels_softseg_bin/sub-geneva03/anat/sub-geneva03_space-other_T2w_softseg_bin.nii.gz new file mode 100644 index 0000000000..88574dc64f --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-geneva03/anat/sub-geneva03_space-other_T2w_softseg_bin.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s37253--f4a426799f1c7c3b6fbc1af4534bb52305add6b4c79a4f58211324d614074b87.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-geneva03/dwi/sub-geneva03_rec-average_dwi_softseg_bin.json b/derivatives/labels_softseg_bin/sub-geneva03/dwi/sub-geneva03_rec-average_dwi_softseg_bin.json new file mode 100644 index 0000000000..0342cc4364 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-geneva03/dwi/sub-geneva03_rec-average_dwi_softseg_bin.json @@ -0,0 +1,4 @@ +{ + "Author": "Sandrine Bedard", + "Date": "2022-10-22 14:36:19" +} \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-geneva03/dwi/sub-geneva03_rec-average_dwi_softseg_bin.nii.gz b/derivatives/labels_softseg_bin/sub-geneva03/dwi/sub-geneva03_rec-average_dwi_softseg_bin.nii.gz new file mode 100644 index 0000000000..8c77afd6be --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-geneva03/dwi/sub-geneva03_rec-average_dwi_softseg_bin.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s1024--99e0016dc07b243397e86b1ef04310f2736b05d0b18bc3e913cdde930a8514a9.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-geneva04/anat/sub-geneva04_flip-1_mt-on_space-other_MTS_softseg_bin.json b/derivatives/labels_softseg_bin/sub-geneva04/anat/sub-geneva04_flip-1_mt-on_space-other_MTS_softseg_bin.json new file mode 100644 index 0000000000..0342cc4364 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-geneva04/anat/sub-geneva04_flip-1_mt-on_space-other_MTS_softseg_bin.json @@ -0,0 +1,4 @@ +{ + "Author": "Sandrine Bedard", + "Date": "2022-10-22 14:36:19" +} \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-geneva04/anat/sub-geneva04_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz b/derivatives/labels_softseg_bin/sub-geneva04/anat/sub-geneva04_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz new file mode 100644 index 0000000000..65f54ae58d --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-geneva04/anat/sub-geneva04_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s7274--6579a7a25e1c9ab9b35ec189ba0ef11e35f0f3a56be778a2063db69b00f4e040.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-geneva04/anat/sub-geneva04_flip-2_mt-off_space-other_MTS_softseg_bin.json b/derivatives/labels_softseg_bin/sub-geneva04/anat/sub-geneva04_flip-2_mt-off_space-other_MTS_softseg_bin.json new file mode 100644 index 0000000000..0342cc4364 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-geneva04/anat/sub-geneva04_flip-2_mt-off_space-other_MTS_softseg_bin.json @@ -0,0 +1,4 @@ +{ + "Author": "Sandrine Bedard", + "Date": "2022-10-22 14:36:19" +} \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-geneva04/anat/sub-geneva04_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz b/derivatives/labels_softseg_bin/sub-geneva04/anat/sub-geneva04_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz new file mode 100644 index 0000000000..24cc94c728 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-geneva04/anat/sub-geneva04_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s7284--38ba15bf8d4f786fc9079a15d6c1332d25693b24a4d3cc4b5d64d6207d6711a4.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-geneva04/anat/sub-geneva04_space-other_T1w_softseg_bin.json b/derivatives/labels_softseg_bin/sub-geneva04/anat/sub-geneva04_space-other_T1w_softseg_bin.json new file mode 100644 index 0000000000..0342cc4364 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-geneva04/anat/sub-geneva04_space-other_T1w_softseg_bin.json @@ -0,0 +1,4 @@ +{ + "Author": "Sandrine Bedard", + "Date": "2022-10-22 14:36:19" +} \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-geneva04/anat/sub-geneva04_space-other_T1w_softseg_bin.nii.gz b/derivatives/labels_softseg_bin/sub-geneva04/anat/sub-geneva04_space-other_T1w_softseg_bin.nii.gz new file mode 100644 index 0000000000..e553e25a03 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-geneva04/anat/sub-geneva04_space-other_T1w_softseg_bin.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s74972--48ed393c7a862d8dddb9cda188e8a52203be0f0d67c839e2768f278fb56c7bc9.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-geneva04/anat/sub-geneva04_space-other_T2star_softseg_bin.json b/derivatives/labels_softseg_bin/sub-geneva04/anat/sub-geneva04_space-other_T2star_softseg_bin.json new file mode 100644 index 0000000000..0342cc4364 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-geneva04/anat/sub-geneva04_space-other_T2star_softseg_bin.json @@ -0,0 +1,4 @@ +{ + "Author": "Sandrine Bedard", + "Date": "2022-10-22 14:36:19" +} \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-geneva04/anat/sub-geneva04_space-other_T2star_softseg_bin.nii.gz b/derivatives/labels_softseg_bin/sub-geneva04/anat/sub-geneva04_space-other_T2star_softseg_bin.nii.gz new file mode 100644 index 0000000000..4cb1adec27 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-geneva04/anat/sub-geneva04_space-other_T2star_softseg_bin.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s14716--27b18a4e0e5e74101574951197e5d9a0d342b72a6784d9ca19c8b3df9e850245.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-geneva04/anat/sub-geneva04_space-other_T2w_softseg_bin.json b/derivatives/labels_softseg_bin/sub-geneva04/anat/sub-geneva04_space-other_T2w_softseg_bin.json new file mode 100644 index 0000000000..0342cc4364 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-geneva04/anat/sub-geneva04_space-other_T2w_softseg_bin.json @@ -0,0 +1,4 @@ +{ + "Author": "Sandrine Bedard", + "Date": "2022-10-22 14:36:19" +} \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-geneva04/anat/sub-geneva04_space-other_T2w_softseg_bin.nii.gz b/derivatives/labels_softseg_bin/sub-geneva04/anat/sub-geneva04_space-other_T2w_softseg_bin.nii.gz new file mode 100644 index 0000000000..756d57ec89 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-geneva04/anat/sub-geneva04_space-other_T2w_softseg_bin.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s36494--a58da78b04d9e9f6f10acd1118e8a6dfef63daf060b5372f1748ce2ceea8fc39.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-geneva04/dwi/sub-geneva04_rec-average_dwi_softseg_bin.json b/derivatives/labels_softseg_bin/sub-geneva04/dwi/sub-geneva04_rec-average_dwi_softseg_bin.json new file mode 100644 index 0000000000..0342cc4364 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-geneva04/dwi/sub-geneva04_rec-average_dwi_softseg_bin.json @@ -0,0 +1,4 @@ +{ + "Author": "Sandrine Bedard", + "Date": "2022-10-22 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b/derivatives/labels_softseg_bin/sub-geneva05/anat/sub-geneva05_space-other_T1w_softseg_bin.json @@ -0,0 +1,4 @@ +{ + "Author": "Sandrine Bedard", + "Date": "2022-10-22 14:36:19" +} \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-geneva05/anat/sub-geneva05_space-other_T1w_softseg_bin.nii.gz b/derivatives/labels_softseg_bin/sub-geneva05/anat/sub-geneva05_space-other_T1w_softseg_bin.nii.gz new file mode 100644 index 0000000000..d7a97df17d --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-geneva05/anat/sub-geneva05_space-other_T1w_softseg_bin.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s75376--8c73a4322d08a08cdf71ba325ccb9a1cca7e0eed71970d618a0356ad65c10f97.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-geneva05/anat/sub-geneva05_space-other_T2star_softseg_bin.json b/derivatives/labels_softseg_bin/sub-geneva05/anat/sub-geneva05_space-other_T2star_softseg_bin.json new file mode 100644 index 0000000000..0342cc4364 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-geneva05/anat/sub-geneva05_space-other_T2star_softseg_bin.json @@ -0,0 +1,4 @@ +{ + "Author": "Sandrine Bedard", + "Date": "2022-10-22 14:36:19" +} \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-geneva05/anat/sub-geneva05_space-other_T2star_softseg_bin.nii.gz b/derivatives/labels_softseg_bin/sub-geneva05/anat/sub-geneva05_space-other_T2star_softseg_bin.nii.gz new file mode 100644 index 0000000000..81902d2c33 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-geneva05/anat/sub-geneva05_space-other_T2star_softseg_bin.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s14704--dfe606f64a3b412c613f875e790760d78ba9f1d60dd71fa5f3ce8e6168b4f195.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-geneva05/anat/sub-geneva05_space-other_T2w_softseg_bin.json b/derivatives/labels_softseg_bin/sub-geneva05/anat/sub-geneva05_space-other_T2w_softseg_bin.json new file mode 100644 index 0000000000..0342cc4364 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-geneva05/anat/sub-geneva05_space-other_T2w_softseg_bin.json @@ -0,0 +1,4 @@ +{ + "Author": "Sandrine Bedard", + "Date": "2022-10-22 14:36:19" +} \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-geneva05/anat/sub-geneva05_space-other_T2w_softseg_bin.nii.gz b/derivatives/labels_softseg_bin/sub-geneva05/anat/sub-geneva05_space-other_T2w_softseg_bin.nii.gz new file mode 100644 index 0000000000..eb54eb0a91 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-geneva05/anat/sub-geneva05_space-other_T2w_softseg_bin.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s37337--53244270cfee766644cd48f0c90b943b0620d7bc2bf4d0bd609d2923255c3d61.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-geneva05/dwi/sub-geneva05_rec-average_dwi_softseg_bin.json b/derivatives/labels_softseg_bin/sub-geneva05/dwi/sub-geneva05_rec-average_dwi_softseg_bin.json new file mode 100644 index 0000000000..0342cc4364 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-geneva05/dwi/sub-geneva05_rec-average_dwi_softseg_bin.json @@ -0,0 +1,4 @@ +{ + "Author": "Sandrine Bedard", + "Date": "2022-10-22 14:36:19" +} \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-geneva05/dwi/sub-geneva05_rec-average_dwi_softseg_bin.nii.gz b/derivatives/labels_softseg_bin/sub-geneva05/dwi/sub-geneva05_rec-average_dwi_softseg_bin.nii.gz new file mode 100644 index 0000000000..274659473d --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-geneva05/dwi/sub-geneva05_rec-average_dwi_softseg_bin.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s1015--aff70e2788823a54c83e2ea902156ba8d3a438d8c09548e0ca7448ad8c00adff.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-geneva06/anat/sub-geneva06_flip-1_mt-on_space-other_MTS_softseg_bin.json b/derivatives/labels_softseg_bin/sub-geneva06/anat/sub-geneva06_flip-1_mt-on_space-other_MTS_softseg_bin.json new file mode 100644 index 0000000000..7427cbcb5a --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-geneva06/anat/sub-geneva06_flip-1_mt-on_space-other_MTS_softseg_bin.json @@ -0,0 +1,4 @@ +{ + "Author": "Sandrine Bedard", + "Date": "2022-10-22 14:36:20" +} \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-geneva06/anat/sub-geneva06_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz b/derivatives/labels_softseg_bin/sub-geneva06/anat/sub-geneva06_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz new file mode 100644 index 0000000000..e752fb8046 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-geneva06/anat/sub-geneva06_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s7294--26b501b2f56a2c7116531472f10fd3a4d55d43a8d6501efd4ba85f0f777442e7.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-geneva06/anat/sub-geneva06_flip-2_mt-off_space-other_MTS_softseg_bin.json b/derivatives/labels_softseg_bin/sub-geneva06/anat/sub-geneva06_flip-2_mt-off_space-other_MTS_softseg_bin.json new file 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a/derivatives/labels_softseg_bin/sub-hamburg02/dwi/sub-hamburg02_rec-average_dwi_softseg_bin.nii.gz b/derivatives/labels_softseg_bin/sub-hamburg02/dwi/sub-hamburg02_rec-average_dwi_softseg_bin.nii.gz new file mode 100644 index 0000000000..953b08a901 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-hamburg02/dwi/sub-hamburg02_rec-average_dwi_softseg_bin.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s972--268cf83fa865998a7bae3d13224c4d8cbc1d704f21c2a5a405643760753861fa.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-hamburg03/anat/sub-hamburg03_flip-1_mt-on_space-other_MTS_softseg_bin.json b/derivatives/labels_softseg_bin/sub-hamburg03/anat/sub-hamburg03_flip-1_mt-on_space-other_MTS_softseg_bin.json new file mode 100644 index 0000000000..7427cbcb5a --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-hamburg03/anat/sub-hamburg03_flip-1_mt-on_space-other_MTS_softseg_bin.json @@ -0,0 +1,4 @@ +{ + "Author": "Sandrine Bedard", + "Date": "2022-10-22 14:36:20" +} \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-hamburg03/anat/sub-hamburg03_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz b/derivatives/labels_softseg_bin/sub-hamburg03/anat/sub-hamburg03_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz new file mode 100644 index 0000000000..42af332f02 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-hamburg03/anat/sub-hamburg03_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s7372--9d3788f2fb73b9a3fc0b9b60571e9f6893dbfa269dde117fcf530e2d0e8f8b95.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-hamburg03/anat/sub-hamburg03_flip-2_mt-off_space-other_MTS_softseg_bin.json b/derivatives/labels_softseg_bin/sub-hamburg03/anat/sub-hamburg03_flip-2_mt-off_space-other_MTS_softseg_bin.json new file mode 100644 index 0000000000..7427cbcb5a --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-hamburg03/anat/sub-hamburg03_flip-2_mt-off_space-other_MTS_softseg_bin.json @@ -0,0 +1,4 @@ +{ + "Author": "Sandrine Bedard", + "Date": "2022-10-22 14:36:20" +} \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-hamburg03/anat/sub-hamburg03_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz b/derivatives/labels_softseg_bin/sub-hamburg03/anat/sub-hamburg03_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz new file mode 100644 index 0000000000..8e663be7cc --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-hamburg03/anat/sub-hamburg03_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s7273--465236dcad1667a51a4207ca223c6b62f804ef6e9bcd7181ef56883e54fc96cd.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-hamburg03/anat/sub-hamburg03_space-other_T1w_softseg_bin.json b/derivatives/labels_softseg_bin/sub-hamburg03/anat/sub-hamburg03_space-other_T1w_softseg_bin.json new file mode 100644 index 0000000000..7427cbcb5a --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-hamburg03/anat/sub-hamburg03_space-other_T1w_softseg_bin.json @@ -0,0 +1,4 @@ +{ + "Author": "Sandrine Bedard", + "Date": "2022-10-22 14:36:20" +} \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-hamburg03/anat/sub-hamburg03_space-other_T1w_softseg_bin.nii.gz b/derivatives/labels_softseg_bin/sub-hamburg03/anat/sub-hamburg03_space-other_T1w_softseg_bin.nii.gz new file mode 100644 index 0000000000..7767f18899 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-hamburg03/anat/sub-hamburg03_space-other_T1w_softseg_bin.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s75508--517f777483ebca1b6bb341181fc5403a6865c96f89ebd14df28b6369ee282550.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-hamburg03/anat/sub-hamburg03_space-other_T2star_softseg_bin.json b/derivatives/labels_softseg_bin/sub-hamburg03/anat/sub-hamburg03_space-other_T2star_softseg_bin.json new file mode 100644 index 0000000000..7427cbcb5a --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-hamburg03/anat/sub-hamburg03_space-other_T2star_softseg_bin.json @@ -0,0 +1,4 @@ +{ + "Author": "Sandrine Bedard", + "Date": "2022-10-22 14:36:20" +} \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-hamburg03/anat/sub-hamburg03_space-other_T2star_softseg_bin.nii.gz b/derivatives/labels_softseg_bin/sub-hamburg03/anat/sub-hamburg03_space-other_T2star_softseg_bin.nii.gz new file mode 100644 index 0000000000..abf77cfe99 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-hamburg03/anat/sub-hamburg03_space-other_T2star_softseg_bin.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s14879--f3e8ad00f62ef203267be5b9c700271e960df31a7c065849a320d034f479d545.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-hamburg03/anat/sub-hamburg03_space-other_T2w_softseg_bin.json b/derivatives/labels_softseg_bin/sub-hamburg03/anat/sub-hamburg03_space-other_T2w_softseg_bin.json new file mode 100644 index 0000000000..7427cbcb5a --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-hamburg03/anat/sub-hamburg03_space-other_T2w_softseg_bin.json @@ -0,0 +1,4 @@ +{ + "Author": "Sandrine Bedard", + "Date": "2022-10-22 14:36:20" +} \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-hamburg03/anat/sub-hamburg03_space-other_T2w_softseg_bin.nii.gz b/derivatives/labels_softseg_bin/sub-hamburg03/anat/sub-hamburg03_space-other_T2w_softseg_bin.nii.gz new file mode 100644 index 0000000000..c6b557bb87 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-hamburg03/anat/sub-hamburg03_space-other_T2w_softseg_bin.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s37948--f0feddb3e116adf0eb2ad31e148a353c3f40457b0290094bcb3bede7e6efcc3d.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-hamburg03/dwi/sub-hamburg03_rec-average_dwi_softseg_bin.json b/derivatives/labels_softseg_bin/sub-hamburg03/dwi/sub-hamburg03_rec-average_dwi_softseg_bin.json new file mode 100644 index 0000000000..6b43fe629f --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-hamburg03/dwi/sub-hamburg03_rec-average_dwi_softseg_bin.json @@ -0,0 +1,4 @@ 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b/derivatives/labels_softseg_bin/sub-hamburg04/anat/sub-hamburg04_flip-1_mt-on_space-other_MTS_softseg_bin.json @@ -0,0 +1,4 @@ +{ + "Author": "Sandrine Bedard", + "Date": "2022-10-22 14:36:21" +} \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-hamburg04/anat/sub-hamburg04_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz b/derivatives/labels_softseg_bin/sub-hamburg04/anat/sub-hamburg04_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz new file mode 100644 index 0000000000..d95c78c283 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-hamburg04/anat/sub-hamburg04_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s7296--41701ca4fe7306de42be43577bfac1028ffa0ef250fbc08fab4a6a6fec8a66db.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-hamburg04/anat/sub-hamburg04_flip-2_mt-off_space-other_MTS_softseg_bin.json b/derivatives/labels_softseg_bin/sub-hamburg04/anat/sub-hamburg04_flip-2_mt-off_space-other_MTS_softseg_bin.json new file mode 100644 index 0000000000..6b43fe629f --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-hamburg04/anat/sub-hamburg04_flip-2_mt-off_space-other_MTS_softseg_bin.json @@ -0,0 +1,4 @@ +{ + "Author": "Sandrine Bedard", + "Date": "2022-10-22 14:36:21" +} \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-hamburg04/anat/sub-hamburg04_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz b/derivatives/labels_softseg_bin/sub-hamburg04/anat/sub-hamburg04_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz new file mode 100644 index 0000000000..e36195398a --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-hamburg04/anat/sub-hamburg04_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s7225--5f8a2d56135fc69ae95c6a9a41c36828bb13ae4d387f24579cd8f99c03faeac0.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-hamburg04/anat/sub-hamburg04_space-other_T1w_softseg_bin.json 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--git a/derivatives/labels_softseg_bin/sub-juntendo750w02/anat/sub-juntendo750w02_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz b/derivatives/labels_softseg_bin/sub-juntendo750w02/anat/sub-juntendo750w02_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz new file mode 100644 index 0000000000..2190561686 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-juntendo750w02/anat/sub-juntendo750w02_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s5682--5878829dc162c5bbd3571abf53953b34ba64992fb2635d5560285f3ab87c3d08.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-juntendo750w02/anat/sub-juntendo750w02_space-other_T1w_softseg_bin.json b/derivatives/labels_softseg_bin/sub-juntendo750w02/anat/sub-juntendo750w02_space-other_T1w_softseg_bin.json new file mode 100644 index 0000000000..c05b2a0b2d --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-juntendo750w02/anat/sub-juntendo750w02_space-other_T1w_softseg_bin.json @@ -0,0 +1,4 @@ +{ + "Author": "Sandrine Bedard", + "Date": "2022-10-22 14:36:22" +} \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-juntendo750w02/anat/sub-juntendo750w02_space-other_T1w_softseg_bin.nii.gz b/derivatives/labels_softseg_bin/sub-juntendo750w02/anat/sub-juntendo750w02_space-other_T1w_softseg_bin.nii.gz new file mode 100644 index 0000000000..7af8894a05 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-juntendo750w02/anat/sub-juntendo750w02_space-other_T1w_softseg_bin.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s89310--e9f92fac68a9268d9df8e5033cadab3e834c9d7314ade6f8279042024d2b8f40.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-juntendo750w02/anat/sub-juntendo750w02_space-other_T2star_softseg_bin.json b/derivatives/labels_softseg_bin/sub-juntendo750w02/anat/sub-juntendo750w02_space-other_T2star_softseg_bin.json new file mode 100644 index 0000000000..c05b2a0b2d --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-juntendo750w02/anat/sub-juntendo750w02_space-other_T2star_softseg_bin.json @@ -0,0 +1,4 @@ +{ + "Author": "Sandrine Bedard", + "Date": "2022-10-22 14:36:22" +} \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-juntendo750w02/anat/sub-juntendo750w02_space-other_T2star_softseg_bin.nii.gz b/derivatives/labels_softseg_bin/sub-juntendo750w02/anat/sub-juntendo750w02_space-other_T2star_softseg_bin.nii.gz new file mode 100644 index 0000000000..64af793605 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-juntendo750w02/anat/sub-juntendo750w02_space-other_T2star_softseg_bin.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s14639--ef790a6417ad641c80012358725da6b5273a695d8b8dfe13bd0be1f41578e0cd.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-juntendo750w02/anat/sub-juntendo750w02_space-other_T2w_softseg_bin.json b/derivatives/labels_softseg_bin/sub-juntendo750w02/anat/sub-juntendo750w02_space-other_T2w_softseg_bin.json new file mode 100644 index 0000000000..c05b2a0b2d --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-juntendo750w02/anat/sub-juntendo750w02_space-other_T2w_softseg_bin.json @@ -0,0 +1,4 @@ +{ + "Author": "Sandrine Bedard", + "Date": "2022-10-22 14:36:22" +} \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-juntendo750w02/anat/sub-juntendo750w02_space-other_T2w_softseg_bin.nii.gz b/derivatives/labels_softseg_bin/sub-juntendo750w02/anat/sub-juntendo750w02_space-other_T2w_softseg_bin.nii.gz new file mode 100644 index 0000000000..3d048135d1 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-juntendo750w02/anat/sub-juntendo750w02_space-other_T2w_softseg_bin.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s33287--645c7dbabf8ad4915b32bcd21cf824c957d136021b6ea7c5b237eb7eb43445cd.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-juntendo750w02/dwi/sub-juntendo750w02_rec-average_dwi_softseg_bin.json 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-0,0 +1 @@ +/annex/objects/SHA256E-s5924--2ac998cd8d5ef44331b821ab4e646cbe51aed0a1960af574ad0716329174184d.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-juntendo750w03/anat/sub-juntendo750w03_flip-2_mt-off_space-other_MTS_softseg_bin.json b/derivatives/labels_softseg_bin/sub-juntendo750w03/anat/sub-juntendo750w03_flip-2_mt-off_space-other_MTS_softseg_bin.json new file mode 100644 index 0000000000..c05b2a0b2d --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-juntendo750w03/anat/sub-juntendo750w03_flip-2_mt-off_space-other_MTS_softseg_bin.json @@ -0,0 +1,4 @@ +{ + "Author": "Sandrine Bedard", + "Date": "2022-10-22 14:36:22" +} \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-juntendo750w03/anat/sub-juntendo750w03_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz b/derivatives/labels_softseg_bin/sub-juntendo750w03/anat/sub-juntendo750w03_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz new file mode 100644 index 0000000000..a23fc54367 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-juntendo750w03/anat/sub-juntendo750w03_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s5821--77e49cc16b9ec28b5db2cd0884eca3ab30fab96179ab9115580576d5bc433423.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-juntendo750w03/anat/sub-juntendo750w03_space-other_T1w_softseg_bin.json b/derivatives/labels_softseg_bin/sub-juntendo750w03/anat/sub-juntendo750w03_space-other_T1w_softseg_bin.json new file mode 100644 index 0000000000..c05b2a0b2d --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-juntendo750w03/anat/sub-juntendo750w03_space-other_T1w_softseg_bin.json @@ -0,0 +1,4 @@ +{ + "Author": "Sandrine Bedard", + "Date": "2022-10-22 14:36:22" +} \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-juntendo750w03/anat/sub-juntendo750w03_space-other_T1w_softseg_bin.nii.gz b/derivatives/labels_softseg_bin/sub-juntendo750w03/anat/sub-juntendo750w03_space-other_T1w_softseg_bin.nii.gz new file mode 100644 index 0000000000..ccbe8157c5 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-juntendo750w03/anat/sub-juntendo750w03_space-other_T1w_softseg_bin.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s89495--ee1e419bcfdd16589d7cc37e12fd0f1cf4600159c09d44d1fa0e70116a05f2dc.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-juntendo750w03/anat/sub-juntendo750w03_space-other_T2star_softseg_bin.json b/derivatives/labels_softseg_bin/sub-juntendo750w03/anat/sub-juntendo750w03_space-other_T2star_softseg_bin.json new file mode 100644 index 0000000000..c05b2a0b2d --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-juntendo750w03/anat/sub-juntendo750w03_space-other_T2star_softseg_bin.json @@ -0,0 +1,4 @@ +{ + "Author": "Sandrine Bedard", + "Date": "2022-10-22 14:36:22" +} \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-juntendo750w03/anat/sub-juntendo750w03_space-other_T2star_softseg_bin.nii.gz 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a/derivatives/labels_softseg_bin/sub-juntendo750w03/anat/sub-juntendo750w03_space-other_T2w_softseg_bin.nii.gz b/derivatives/labels_softseg_bin/sub-juntendo750w03/anat/sub-juntendo750w03_space-other_T2w_softseg_bin.nii.gz new file mode 100644 index 0000000000..351e34d61d --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-juntendo750w03/anat/sub-juntendo750w03_space-other_T2w_softseg_bin.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s34059--0203ee91fe9bda216e6812b441d9116bba47d3a3d53d034ac40ef780afa78ce3.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-juntendo750w03/dwi/sub-juntendo750w03_rec-average_dwi_softseg_bin.json b/derivatives/labels_softseg_bin/sub-juntendo750w03/dwi/sub-juntendo750w03_rec-average_dwi_softseg_bin.json new file mode 100644 index 0000000000..c05b2a0b2d --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-juntendo750w03/dwi/sub-juntendo750w03_rec-average_dwi_softseg_bin.json @@ -0,0 +1,4 @@ +{ + "Author": "Sandrine Bedard", + "Date": "2022-10-22 14:36:22" +} \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-juntendo750w03/dwi/sub-juntendo750w03_rec-average_dwi_softseg_bin.nii.gz b/derivatives/labels_softseg_bin/sub-juntendo750w03/dwi/sub-juntendo750w03_rec-average_dwi_softseg_bin.nii.gz new file mode 100644 index 0000000000..07c82bca5d --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-juntendo750w03/dwi/sub-juntendo750w03_rec-average_dwi_softseg_bin.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s1402--9e1c1c9fece1546fbc57ea24211f2c9c75080ce72f2316497b562ba7ac637754.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-juntendo750w04/anat/sub-juntendo750w04_flip-1_mt-on_space-other_MTS_softseg_bin.json b/derivatives/labels_softseg_bin/sub-juntendo750w04/anat/sub-juntendo750w04_flip-1_mt-on_space-other_MTS_softseg_bin.json new file mode 100644 index 0000000000..c05b2a0b2d --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-juntendo750w04/anat/sub-juntendo750w04_flip-1_mt-on_space-other_MTS_softseg_bin.json @@ -0,0 +1,4 @@ +{ + "Author": "Sandrine Bedard", + "Date": "2022-10-22 14:36:22" +} \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-juntendo750w04/anat/sub-juntendo750w04_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz b/derivatives/labels_softseg_bin/sub-juntendo750w04/anat/sub-juntendo750w04_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz new file mode 100644 index 0000000000..799230608d --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-juntendo750w04/anat/sub-juntendo750w04_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s5774--f7ab6b539f0241330bab336240591932d5cf6327fd1bc5b4d817378ac7452d72.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-juntendo750w04/anat/sub-juntendo750w04_flip-2_mt-off_space-other_MTS_softseg_bin.json 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b/derivatives/labels_softseg_bin/sub-juntendo750w06/anat/sub-juntendo750w06_space-other_T2star_softseg_bin.json @@ -0,0 +1,4 @@ +{ + "Author": "Sandrine Bedard", + "Date": "2022-10-22 14:36:23" +} \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-juntendo750w06/anat/sub-juntendo750w06_space-other_T2star_softseg_bin.nii.gz b/derivatives/labels_softseg_bin/sub-juntendo750w06/anat/sub-juntendo750w06_space-other_T2star_softseg_bin.nii.gz new file mode 100644 index 0000000000..0347069740 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-juntendo750w06/anat/sub-juntendo750w06_space-other_T2star_softseg_bin.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s14664--e832a016334efea2be6928a6abba759dddd36df580ec2cbc375a193ca6c9656e.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-juntendo750w06/anat/sub-juntendo750w06_space-other_T2w_softseg_bin.json b/derivatives/labels_softseg_bin/sub-juntendo750w06/anat/sub-juntendo750w06_space-other_T2w_softseg_bin.json new 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b/derivatives/labels_softseg_bin/sub-mgh06/anat/sub-mgh06_space-other_T2star_softseg_bin.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s14653--c28060063d72f0244e50e2e61ef35d692e23118b31623863a4c1ae2c6aadba13.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-mgh06/anat/sub-mgh06_space-other_T2w_softseg_bin.json b/derivatives/labels_softseg_bin/sub-mgh06/anat/sub-mgh06_space-other_T2w_softseg_bin.json new file mode 100644 index 0000000000..0a66c7c0c3 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-mgh06/anat/sub-mgh06_space-other_T2w_softseg_bin.json @@ -0,0 +1,4 @@ +{ + "Author": "Sandrine Bedard", + "Date": "2022-10-22 14:36:24" +} \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-mgh06/anat/sub-mgh06_space-other_T2w_softseg_bin.nii.gz b/derivatives/labels_softseg_bin/sub-mgh06/anat/sub-mgh06_space-other_T2w_softseg_bin.nii.gz new file mode 100644 index 0000000000..9cf328b8c3 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-mgh06/anat/sub-mgh06_space-other_T2w_softseg_bin.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s37895--dc115975f1bc9557c91991477975a30e5b87653feed8dd4c0fe9e4e33afdb9a1.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-mgh06/dwi/sub-mgh06_rec-average_dwi_softseg_bin.json b/derivatives/labels_softseg_bin/sub-mgh06/dwi/sub-mgh06_rec-average_dwi_softseg_bin.json new file mode 100644 index 0000000000..d1cc059831 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-mgh06/dwi/sub-mgh06_rec-average_dwi_softseg_bin.json @@ -0,0 +1,4 @@ +{ + "Author": "Sandrine Bedard", + "Date": "2022-10-22 14:36:25" +} \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-mgh06/dwi/sub-mgh06_rec-average_dwi_softseg_bin.nii.gz b/derivatives/labels_softseg_bin/sub-mgh06/dwi/sub-mgh06_rec-average_dwi_softseg_bin.nii.gz new file mode 100644 index 0000000000..b340089cd4 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-mgh06/dwi/sub-mgh06_rec-average_dwi_softseg_bin.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s992--523750834f530614e3ab2ae20cdd950856d9a954ca46b27973f61170c5101677.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-milan01/anat/sub-milan01_flip-1_mt-on_space-other_MTS_softseg_bin.json b/derivatives/labels_softseg_bin/sub-milan01/anat/sub-milan01_flip-1_mt-on_space-other_MTS_softseg_bin.json new file mode 100644 index 0000000000..d1cc059831 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-milan01/anat/sub-milan01_flip-1_mt-on_space-other_MTS_softseg_bin.json @@ -0,0 +1,4 @@ +{ + "Author": "Sandrine Bedard", + "Date": "2022-10-22 14:36:25" +} \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-milan01/anat/sub-milan01_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz b/derivatives/labels_softseg_bin/sub-milan01/anat/sub-milan01_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz new file mode 100644 index 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a/derivatives/labels_softseg_bin/sub-milan02/anat/sub-milan02_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz b/derivatives/labels_softseg_bin/sub-milan02/anat/sub-milan02_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz new file mode 100644 index 0000000000..2d6a18a068 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-milan02/anat/sub-milan02_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s7222--3dfade522f3813ffcd94c837bd25480c53444d2edddc097dd1b4d7f44e85a45c.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-milan02/anat/sub-milan02_flip-2_mt-off_space-other_MTS_softseg_bin.json b/derivatives/labels_softseg_bin/sub-milan02/anat/sub-milan02_flip-2_mt-off_space-other_MTS_softseg_bin.json new file mode 100644 index 0000000000..d1cc059831 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-milan02/anat/sub-milan02_flip-2_mt-off_space-other_MTS_softseg_bin.json @@ -0,0 +1,4 @@ +{ + "Author": "Sandrine Bedard", + "Date": "2022-10-22 14:36:25" +} \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-milan02/anat/sub-milan02_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz b/derivatives/labels_softseg_bin/sub-milan02/anat/sub-milan02_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz new file mode 100644 index 0000000000..ba17600df6 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-milan02/anat/sub-milan02_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s7121--2eeeb95642ce3200033037eb276aeb9ebcad06a13b1e769781116afe0ed61c18.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-milan02/anat/sub-milan02_space-other_T1w_softseg_bin.json b/derivatives/labels_softseg_bin/sub-milan02/anat/sub-milan02_space-other_T1w_softseg_bin.json new file mode 100644 index 0000000000..d1cc059831 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-milan02/anat/sub-milan02_space-other_T1w_softseg_bin.json @@ -0,0 +1,4 @@ +{ + "Author": "Sandrine Bedard", + "Date": "2022-10-22 14:36:25" +} \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-milan02/anat/sub-milan02_space-other_T1w_softseg_bin.nii.gz b/derivatives/labels_softseg_bin/sub-milan02/anat/sub-milan02_space-other_T1w_softseg_bin.nii.gz new file mode 100644 index 0000000000..5dbdf32ec4 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-milan02/anat/sub-milan02_space-other_T1w_softseg_bin.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s75501--5203c1c81364370fb301a785a1bec35ef5575cdd9ef6cbae05c82ce11a6374f1.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-milan02/anat/sub-milan02_space-other_T2star_softseg_bin.json b/derivatives/labels_softseg_bin/sub-milan02/anat/sub-milan02_space-other_T2star_softseg_bin.json new file mode 100644 index 0000000000..d1cc059831 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-milan02/anat/sub-milan02_space-other_T2star_softseg_bin.json @@ -0,0 +1,4 @@ +{ + "Author": "Sandrine Bedard", + "Date": "2022-10-22 14:36:25" +} \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-milan02/anat/sub-milan02_space-other_T2star_softseg_bin.nii.gz b/derivatives/labels_softseg_bin/sub-milan02/anat/sub-milan02_space-other_T2star_softseg_bin.nii.gz new file mode 100644 index 0000000000..4049fc3e7a --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-milan02/anat/sub-milan02_space-other_T2star_softseg_bin.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s14623--1eb5dda14b70cf566209260bc5a5328b90bbeec7096b9f3fcaa2aba6dc477ee7.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-milan02/anat/sub-milan02_space-other_T2w_softseg_bin.json b/derivatives/labels_softseg_bin/sub-milan02/anat/sub-milan02_space-other_T2w_softseg_bin.json new file mode 100644 index 0000000000..d1cc059831 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-milan02/anat/sub-milan02_space-other_T2w_softseg_bin.json @@ -0,0 +1,4 @@ +{ + "Author": "Sandrine Bedard", + "Date": "2022-10-22 14:36:25" +} \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-milan02/anat/sub-milan02_space-other_T2w_softseg_bin.nii.gz b/derivatives/labels_softseg_bin/sub-milan02/anat/sub-milan02_space-other_T2w_softseg_bin.nii.gz new file mode 100644 index 0000000000..ae35219504 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-milan02/anat/sub-milan02_space-other_T2w_softseg_bin.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s36775--982a621eb9d431a69c5808cf9fa291353bf2848a72c3d608b03bd4ba235892b2.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-milan02/dwi/sub-milan02_rec-average_dwi_softseg_bin.json b/derivatives/labels_softseg_bin/sub-milan02/dwi/sub-milan02_rec-average_dwi_softseg_bin.json new file mode 100644 index 0000000000..d1cc059831 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-milan02/dwi/sub-milan02_rec-average_dwi_softseg_bin.json @@ -0,0 +1,4 @@ +{ + "Author": "Sandrine Bedard", + "Date": "2022-10-22 14:36:25" +} \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-milan02/dwi/sub-milan02_rec-average_dwi_softseg_bin.nii.gz b/derivatives/labels_softseg_bin/sub-milan02/dwi/sub-milan02_rec-average_dwi_softseg_bin.nii.gz new file mode 100644 index 0000000000..7c0e9ceb75 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-milan02/dwi/sub-milan02_rec-average_dwi_softseg_bin.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s943--6463fdbfaa9c1b585b8d787f4b694c7a1fd465ec20aa6af9c1ce0cd9522fabde.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-milan03/anat/sub-milan03_flip-1_mt-on_space-other_MTS_softseg_bin.json b/derivatives/labels_softseg_bin/sub-milan03/anat/sub-milan03_flip-1_mt-on_space-other_MTS_softseg_bin.json new file mode 100644 index 0000000000..d1cc059831 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-milan03/anat/sub-milan03_flip-1_mt-on_space-other_MTS_softseg_bin.json @@ -0,0 +1,4 @@ +{ + "Author": "Sandrine Bedard", + "Date": "2022-10-22 14:36:25" +} \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-milan03/anat/sub-milan03_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz b/derivatives/labels_softseg_bin/sub-milan03/anat/sub-milan03_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz new file mode 100644 index 0000000000..fc726591a4 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-milan03/anat/sub-milan03_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s7305--82e2ecea1b65dffb276a66d285fdacc4dad18df054c7fc85b52d70abbf3a811a.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-milan03/anat/sub-milan03_flip-2_mt-off_space-other_MTS_softseg_bin.json b/derivatives/labels_softseg_bin/sub-milan03/anat/sub-milan03_flip-2_mt-off_space-other_MTS_softseg_bin.json new file mode 100644 index 0000000000..d1cc059831 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-milan03/anat/sub-milan03_flip-2_mt-off_space-other_MTS_softseg_bin.json @@ -0,0 +1,4 @@ +{ + "Author": "Sandrine Bedard", + "Date": "2022-10-22 14:36:25" +} \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-milan03/anat/sub-milan03_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz b/derivatives/labels_softseg_bin/sub-milan03/anat/sub-milan03_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz new file mode 100644 index 0000000000..d2d1f2e7ea --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-milan03/anat/sub-milan03_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s7217--9cbb003a0125692d2fe17f3ccd61ebbc086504d68dbf62cc0fc0280f82bcfaae.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-milan03/anat/sub-milan03_space-other_T1w_softseg_bin.json b/derivatives/labels_softseg_bin/sub-milan03/anat/sub-milan03_space-other_T1w_softseg_bin.json new file mode 100644 index 0000000000..d1cc059831 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-milan03/anat/sub-milan03_space-other_T1w_softseg_bin.json @@ -0,0 +1,4 @@ +{ + "Author": "Sandrine Bedard", + "Date": "2022-10-22 14:36:25" +} \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-milan03/anat/sub-milan03_space-other_T1w_softseg_bin.nii.gz b/derivatives/labels_softseg_bin/sub-milan03/anat/sub-milan03_space-other_T1w_softseg_bin.nii.gz new file mode 100644 index 0000000000..f72eb39072 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-milan03/anat/sub-milan03_space-other_T1w_softseg_bin.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s75931--4ac41b415800b41ae55e42d16ebe9020f06839eca90ed100abf0cb4dff396df0.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-milan03/anat/sub-milan03_space-other_T2star_softseg_bin.json b/derivatives/labels_softseg_bin/sub-milan03/anat/sub-milan03_space-other_T2star_softseg_bin.json new file mode 100644 index 0000000000..d1cc059831 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-milan03/anat/sub-milan03_space-other_T2star_softseg_bin.json @@ -0,0 +1,4 @@ +{ + "Author": "Sandrine Bedard", + "Date": "2022-10-22 14:36:25" +} \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-milan03/anat/sub-milan03_space-other_T2star_softseg_bin.nii.gz b/derivatives/labels_softseg_bin/sub-milan03/anat/sub-milan03_space-other_T2star_softseg_bin.nii.gz new file mode 100644 index 0000000000..ff7b44a731 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-milan03/anat/sub-milan03_space-other_T2star_softseg_bin.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s14712--ab8d4691ecf662d1ce818fd7a0d31d62726903c9fd3111f3891d10ad606d413d.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-milan03/anat/sub-milan03_space-other_T2w_softseg_bin.json b/derivatives/labels_softseg_bin/sub-milan03/anat/sub-milan03_space-other_T2w_softseg_bin.json new file mode 100644 index 0000000000..d1cc059831 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-milan03/anat/sub-milan03_space-other_T2w_softseg_bin.json @@ -0,0 +1,4 @@ +{ + "Author": "Sandrine Bedard", + "Date": "2022-10-22 14:36:25" +} \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-milan03/anat/sub-milan03_space-other_T2w_softseg_bin.nii.gz b/derivatives/labels_softseg_bin/sub-milan03/anat/sub-milan03_space-other_T2w_softseg_bin.nii.gz new file mode 100644 index 0000000000..9bc48ba09c --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-milan03/anat/sub-milan03_space-other_T2w_softseg_bin.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s37840--4ab1d854bceaece6ccbf99b8c5b5957bd8db5bc97df36453662c270d7c945ee1.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-milan03/dwi/sub-milan03_rec-average_dwi_softseg_bin.json b/derivatives/labels_softseg_bin/sub-milan03/dwi/sub-milan03_rec-average_dwi_softseg_bin.json new file mode 100644 index 0000000000..d1cc059831 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-milan03/dwi/sub-milan03_rec-average_dwi_softseg_bin.json @@ -0,0 +1,4 @@ +{ + "Author": "Sandrine Bedard", + "Date": "2022-10-22 14:36:25" +} \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-milan03/dwi/sub-milan03_rec-average_dwi_softseg_bin.nii.gz b/derivatives/labels_softseg_bin/sub-milan03/dwi/sub-milan03_rec-average_dwi_softseg_bin.nii.gz new file mode 100644 index 0000000000..9a40b6d178 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-milan03/dwi/sub-milan03_rec-average_dwi_softseg_bin.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s970--86c0fb1390bd0851187dabf65e548eb7867e2dbda17ca2610e2c621593cf9990.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-milan04/anat/sub-milan04_flip-1_mt-on_space-other_MTS_softseg_bin.json b/derivatives/labels_softseg_bin/sub-milan04/anat/sub-milan04_flip-1_mt-on_space-other_MTS_softseg_bin.json new file mode 100644 index 0000000000..d1cc059831 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-milan04/anat/sub-milan04_flip-1_mt-on_space-other_MTS_softseg_bin.json @@ -0,0 +1,4 @@ +{ + "Author": "Sandrine Bedard", + "Date": "2022-10-22 14:36:25" +} \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-milan04/anat/sub-milan04_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz b/derivatives/labels_softseg_bin/sub-milan04/anat/sub-milan04_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz new file mode 100644 index 0000000000..5c7f6df426 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-milan04/anat/sub-milan04_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s7311--8388a5d43b314991d4214028336cb59617197ef20c2e235ca62f445cecfbd871.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-milan04/anat/sub-milan04_flip-2_mt-off_space-other_MTS_softseg_bin.json b/derivatives/labels_softseg_bin/sub-milan04/anat/sub-milan04_flip-2_mt-off_space-other_MTS_softseg_bin.json new file mode 100644 index 0000000000..d1cc059831 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-milan04/anat/sub-milan04_flip-2_mt-off_space-other_MTS_softseg_bin.json @@ -0,0 +1,4 @@ +{ + "Author": "Sandrine Bedard", + "Date": "2022-10-22 14:36:25" +} \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-milan04/anat/sub-milan04_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz b/derivatives/labels_softseg_bin/sub-milan04/anat/sub-milan04_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz new file mode 100644 index 0000000000..3a40aa7e94 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-milan04/anat/sub-milan04_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s7216--c7f857e80c31aa352d84ba4b7e0ada78f952f6b2df8752a0af59dc68f5504218.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-milan04/anat/sub-milan04_space-other_T1w_softseg_bin.json b/derivatives/labels_softseg_bin/sub-milan04/anat/sub-milan04_space-other_T1w_softseg_bin.json new file mode 100644 index 0000000000..d1cc059831 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-milan04/anat/sub-milan04_space-other_T1w_softseg_bin.json @@ -0,0 +1,4 @@ +{ + "Author": "Sandrine Bedard", + "Date": "2022-10-22 14:36:25" +} \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-milan04/anat/sub-milan04_space-other_T1w_softseg_bin.nii.gz b/derivatives/labels_softseg_bin/sub-milan04/anat/sub-milan04_space-other_T1w_softseg_bin.nii.gz new file mode 100644 index 0000000000..04a21a7613 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-milan04/anat/sub-milan04_space-other_T1w_softseg_bin.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s75698--11cdaeb9d57ecdf679cff94775408b9c4eda83ba7fd1d0962f7d71cc053f4831.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-milan04/anat/sub-milan04_space-other_T2star_softseg_bin.json b/derivatives/labels_softseg_bin/sub-milan04/anat/sub-milan04_space-other_T2star_softseg_bin.json new file mode 100644 index 0000000000..d1cc059831 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-milan04/anat/sub-milan04_space-other_T2star_softseg_bin.json @@ -0,0 +1,4 @@ +{ + "Author": "Sandrine Bedard", + "Date": "2022-10-22 14:36:25" +} \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-milan04/anat/sub-milan04_space-other_T2star_softseg_bin.nii.gz b/derivatives/labels_softseg_bin/sub-milan04/anat/sub-milan04_space-other_T2star_softseg_bin.nii.gz new file mode 100644 index 0000000000..2c7db400da --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-milan04/anat/sub-milan04_space-other_T2star_softseg_bin.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s14692--6232d616dbb88a1853e78d23f74b5ffc360d3ef54b2d5c5133157c62c3f928e3.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-milan04/anat/sub-milan04_space-other_T2w_softseg_bin.json b/derivatives/labels_softseg_bin/sub-milan04/anat/sub-milan04_space-other_T2w_softseg_bin.json new file mode 100644 index 0000000000..d1cc059831 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-milan04/anat/sub-milan04_space-other_T2w_softseg_bin.json @@ -0,0 +1,4 @@ +{ + "Author": "Sandrine Bedard", + "Date": "2022-10-22 14:36:25" +} \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-milan04/anat/sub-milan04_space-other_T2w_softseg_bin.nii.gz b/derivatives/labels_softseg_bin/sub-milan04/anat/sub-milan04_space-other_T2w_softseg_bin.nii.gz new file mode 100644 index 0000000000..c2ee1a2c4b --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-milan04/anat/sub-milan04_space-other_T2w_softseg_bin.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s37258--17d5bf6146bbe0065eda1a9d3dddf132b8ea3f0874ca1fcfa213bbeefc6bba6f.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-milan04/dwi/sub-milan04_rec-average_dwi_softseg_bin.json b/derivatives/labels_softseg_bin/sub-milan04/dwi/sub-milan04_rec-average_dwi_softseg_bin.json new file mode 100644 index 0000000000..d1cc059831 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-milan04/dwi/sub-milan04_rec-average_dwi_softseg_bin.json @@ -0,0 +1,4 @@ +{ + "Author": "Sandrine Bedard", + "Date": "2022-10-22 14:36:25" +} \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-milan04/dwi/sub-milan04_rec-average_dwi_softseg_bin.nii.gz b/derivatives/labels_softseg_bin/sub-milan04/dwi/sub-milan04_rec-average_dwi_softseg_bin.nii.gz new file mode 100644 index 0000000000..18130b43a3 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-milan04/dwi/sub-milan04_rec-average_dwi_softseg_bin.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s1024--71b96404d07f112d7574399368bb84ef76ce60e0734e6f1c9d69d8eccc8e1d54.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-milan05/anat/sub-milan05_flip-1_mt-on_space-other_MTS_softseg_bin.json b/derivatives/labels_softseg_bin/sub-milan05/anat/sub-milan05_flip-1_mt-on_space-other_MTS_softseg_bin.json new file mode 100644 index 0000000000..f2e1189bfc --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-milan05/anat/sub-milan05_flip-1_mt-on_space-other_MTS_softseg_bin.json @@ -0,0 +1,4 @@ +{ + "Author": "Sandrine Bedard", + "Date": "2022-10-22 14:36:26" +} \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-milan05/anat/sub-milan05_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz b/derivatives/labels_softseg_bin/sub-milan05/anat/sub-milan05_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz new file mode 100644 index 0000000000..47316c906e --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-milan05/anat/sub-milan05_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s7356--854d30521142bea9a535164228c4fa9a80d73fe9e76d085b75015a1f26d7bba5.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-milan05/anat/sub-milan05_flip-2_mt-off_space-other_MTS_softseg_bin.json b/derivatives/labels_softseg_bin/sub-milan05/anat/sub-milan05_flip-2_mt-off_space-other_MTS_softseg_bin.json new file mode 100644 index 0000000000..f2e1189bfc --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-milan05/anat/sub-milan05_flip-2_mt-off_space-other_MTS_softseg_bin.json @@ -0,0 +1,4 @@ +{ + "Author": "Sandrine Bedard", + "Date": "2022-10-22 14:36:26" +} \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-milan05/anat/sub-milan05_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz b/derivatives/labels_softseg_bin/sub-milan05/anat/sub-milan05_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz new file mode 100644 index 0000000000..620b636add --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-milan05/anat/sub-milan05_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s7302--3821585bd1f5f7a0ad7b2590302f080035cf5f8d391c04a612749cb243211306.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-milan05/anat/sub-milan05_space-other_T1w_softseg_bin.json b/derivatives/labels_softseg_bin/sub-milan05/anat/sub-milan05_space-other_T1w_softseg_bin.json new file mode 100644 index 0000000000..f2e1189bfc --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-milan05/anat/sub-milan05_space-other_T1w_softseg_bin.json @@ -0,0 +1,4 @@ +{ + "Author": "Sandrine Bedard", + "Date": "2022-10-22 14:36:26" +} \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-milan05/anat/sub-milan05_space-other_T1w_softseg_bin.nii.gz b/derivatives/labels_softseg_bin/sub-milan05/anat/sub-milan05_space-other_T1w_softseg_bin.nii.gz new file mode 100644 index 0000000000..028f512458 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-milan05/anat/sub-milan05_space-other_T1w_softseg_bin.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s75555--f136f5552ac62abe8d5204d164e468418fda9dc2c8fb02c049ae648a5615283c.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-milan05/anat/sub-milan05_space-other_T2star_softseg_bin.json b/derivatives/labels_softseg_bin/sub-milan05/anat/sub-milan05_space-other_T2star_softseg_bin.json new file mode 100644 index 0000000000..f2e1189bfc --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-milan05/anat/sub-milan05_space-other_T2star_softseg_bin.json @@ -0,0 +1,4 @@ +{ + "Author": "Sandrine Bedard", + "Date": "2022-10-22 14:36:26" +} \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-milan05/anat/sub-milan05_space-other_T2star_softseg_bin.nii.gz b/derivatives/labels_softseg_bin/sub-milan05/anat/sub-milan05_space-other_T2star_softseg_bin.nii.gz new file mode 100644 index 0000000000..c167577228 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-milan05/anat/sub-milan05_space-other_T2star_softseg_bin.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s14712--fbe0980017840acdca2db3ae949fdc2ee717d09f0842ff0f8df0abf67fe523fa.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-milan05/anat/sub-milan05_space-other_T2w_softseg_bin.json b/derivatives/labels_softseg_bin/sub-milan05/anat/sub-milan05_space-other_T2w_softseg_bin.json new file mode 100644 index 0000000000..f2e1189bfc --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-milan05/anat/sub-milan05_space-other_T2w_softseg_bin.json @@ -0,0 +1,4 @@ +{ + "Author": "Sandrine Bedard", + "Date": "2022-10-22 14:36:26" +} \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-milan05/anat/sub-milan05_space-other_T2w_softseg_bin.nii.gz b/derivatives/labels_softseg_bin/sub-milan05/anat/sub-milan05_space-other_T2w_softseg_bin.nii.gz new file mode 100644 index 0000000000..24bda59b97 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-milan05/anat/sub-milan05_space-other_T2w_softseg_bin.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s37276--b70bd53dca428fa56d329064093c1050b4611bfcf0d73d1301c620559461e282.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-milan05/dwi/sub-milan05_rec-average_dwi_softseg_bin.json b/derivatives/labels_softseg_bin/sub-milan05/dwi/sub-milan05_rec-average_dwi_softseg_bin.json new file mode 100644 index 0000000000..f2e1189bfc --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-milan05/dwi/sub-milan05_rec-average_dwi_softseg_bin.json @@ -0,0 +1,4 @@ +{ + "Author": "Sandrine Bedard", + "Date": "2022-10-22 14:36:26" +} \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-milan05/dwi/sub-milan05_rec-average_dwi_softseg_bin.nii.gz b/derivatives/labels_softseg_bin/sub-milan05/dwi/sub-milan05_rec-average_dwi_softseg_bin.nii.gz new file mode 100644 index 0000000000..aad1a9ac8c --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-milan05/dwi/sub-milan05_rec-average_dwi_softseg_bin.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s967--0b9de7c5226e8c53c5a8101e28447af34aab7677a39d7d6edb8c4b9646f56970.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-milan06/anat/sub-milan06_flip-1_mt-on_space-other_MTS_softseg_bin.json b/derivatives/labels_softseg_bin/sub-milan06/anat/sub-milan06_flip-1_mt-on_space-other_MTS_softseg_bin.json new file mode 100644 index 0000000000..f2e1189bfc --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-milan06/anat/sub-milan06_flip-1_mt-on_space-other_MTS_softseg_bin.json @@ -0,0 +1,4 @@ +{ + "Author": "Sandrine Bedard", + "Date": "2022-10-22 14:36:26" +} \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-milan06/anat/sub-milan06_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz b/derivatives/labels_softseg_bin/sub-milan06/anat/sub-milan06_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz new file mode 100644 index 0000000000..0fcf1873f3 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-milan06/anat/sub-milan06_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s7368--d8f1bec00ceea3c57edd1dc2d8e355581104f5891d6355f08b3c062fdd512b53.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-milan06/anat/sub-milan06_flip-2_mt-off_space-other_MTS_softseg_bin.json b/derivatives/labels_softseg_bin/sub-milan06/anat/sub-milan06_flip-2_mt-off_space-other_MTS_softseg_bin.json new file mode 100644 index 0000000000..f2e1189bfc --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-milan06/anat/sub-milan06_flip-2_mt-off_space-other_MTS_softseg_bin.json @@ -0,0 +1,4 @@ +{ + "Author": "Sandrine Bedard", + "Date": "2022-10-22 14:36:26" +} \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-milan06/anat/sub-milan06_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz b/derivatives/labels_softseg_bin/sub-milan06/anat/sub-milan06_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz new file mode 100644 index 0000000000..3ef5195701 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-milan06/anat/sub-milan06_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s7254--d116aa3f070459abbfac45a49f25eafafe7f3eb0490917f817d76e3c678259c1.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-milan06/anat/sub-milan06_space-other_T1w_softseg_bin.json b/derivatives/labels_softseg_bin/sub-milan06/anat/sub-milan06_space-other_T1w_softseg_bin.json new file mode 100644 index 0000000000..f2e1189bfc --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-milan06/anat/sub-milan06_space-other_T1w_softseg_bin.json @@ -0,0 +1,4 @@ +{ + "Author": "Sandrine Bedard", + "Date": "2022-10-22 14:36:26" +} \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-milan06/anat/sub-milan06_space-other_T1w_softseg_bin.nii.gz b/derivatives/labels_softseg_bin/sub-milan06/anat/sub-milan06_space-other_T1w_softseg_bin.nii.gz new file mode 100644 index 0000000000..104148f7c4 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-milan06/anat/sub-milan06_space-other_T1w_softseg_bin.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s75643--6549c3948be029c2ea1fcbf7770b6ddb2fe6b778fbfd12875b6861b2751b915d.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-milan06/anat/sub-milan06_space-other_T2star_softseg_bin.json b/derivatives/labels_softseg_bin/sub-milan06/anat/sub-milan06_space-other_T2star_softseg_bin.json new file mode 100644 index 0000000000..f2e1189bfc --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-milan06/anat/sub-milan06_space-other_T2star_softseg_bin.json @@ -0,0 +1,4 @@ +{ + "Author": "Sandrine Bedard", + "Date": "2022-10-22 14:36:26" +} \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-milan06/anat/sub-milan06_space-other_T2star_softseg_bin.nii.gz b/derivatives/labels_softseg_bin/sub-milan06/anat/sub-milan06_space-other_T2star_softseg_bin.nii.gz new file mode 100644 index 0000000000..609fb52160 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-milan06/anat/sub-milan06_space-other_T2star_softseg_bin.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s14819--fab9ac84e0e4f6a4e89bf815e904d0082fa82666897680feff0b60d862201514.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-milan06/anat/sub-milan06_space-other_T2w_softseg_bin.json b/derivatives/labels_softseg_bin/sub-milan06/anat/sub-milan06_space-other_T2w_softseg_bin.json new file mode 100644 index 0000000000..f2e1189bfc --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-milan06/anat/sub-milan06_space-other_T2w_softseg_bin.json @@ -0,0 +1,4 @@ +{ + "Author": "Sandrine Bedard", + "Date": "2022-10-22 14:36:26" +} \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-milan06/anat/sub-milan06_space-other_T2w_softseg_bin.nii.gz b/derivatives/labels_softseg_bin/sub-milan06/anat/sub-milan06_space-other_T2w_softseg_bin.nii.gz new file mode 100644 index 0000000000..07c18d90c8 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-milan06/anat/sub-milan06_space-other_T2w_softseg_bin.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s37560--a1dc89343697bac088c5d4016f17a6b1dcb679a1068494c468b8b9b7c89c3097.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-milan06/dwi/sub-milan06_rec-average_dwi_softseg_bin.json b/derivatives/labels_softseg_bin/sub-milan06/dwi/sub-milan06_rec-average_dwi_softseg_bin.json new file mode 100644 index 0000000000..f2e1189bfc --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-milan06/dwi/sub-milan06_rec-average_dwi_softseg_bin.json @@ -0,0 +1,4 @@ +{ + "Author": "Sandrine Bedard", + "Date": "2022-10-22 14:36:26" +} \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-milan06/dwi/sub-milan06_rec-average_dwi_softseg_bin.nii.gz b/derivatives/labels_softseg_bin/sub-milan06/dwi/sub-milan06_rec-average_dwi_softseg_bin.nii.gz new file mode 100644 index 0000000000..0a3c5bbf56 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-milan06/dwi/sub-milan06_rec-average_dwi_softseg_bin.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s1025--9060770420ee660e266f0d7cdebdd198dda6115de71897d6eee1a71402d03d54.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-milan07/anat/sub-milan07_flip-1_mt-on_space-other_MTS_softseg_bin.json b/derivatives/labels_softseg_bin/sub-milan07/anat/sub-milan07_flip-1_mt-on_space-other_MTS_softseg_bin.json new file mode 100644 index 0000000000..f2e1189bfc --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-milan07/anat/sub-milan07_flip-1_mt-on_space-other_MTS_softseg_bin.json @@ -0,0 +1,4 @@ +{ + "Author": "Sandrine Bedard", + "Date": "2022-10-22 14:36:26" +} \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-milan07/anat/sub-milan07_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz b/derivatives/labels_softseg_bin/sub-milan07/anat/sub-milan07_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz new file mode 100644 index 0000000000..1dce4cdfb8 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-milan07/anat/sub-milan07_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s7220--da5bd912633b85ad0aaa2c32f4d52bb3bf89e752410135932ac3ea9fb2bcac71.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-milan07/anat/sub-milan07_flip-2_mt-off_space-other_MTS_softseg_bin.json b/derivatives/labels_softseg_bin/sub-milan07/anat/sub-milan07_flip-2_mt-off_space-other_MTS_softseg_bin.json new file mode 100644 index 0000000000..f2e1189bfc --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-milan07/anat/sub-milan07_flip-2_mt-off_space-other_MTS_softseg_bin.json @@ -0,0 +1,4 @@ +{ + "Author": "Sandrine Bedard", + "Date": "2022-10-22 14:36:26" +} \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-milan07/anat/sub-milan07_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz b/derivatives/labels_softseg_bin/sub-milan07/anat/sub-milan07_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz new file mode 100644 index 0000000000..17018e6a0c --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-milan07/anat/sub-milan07_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s7109--1acbc362380813967a0a9db2b3cb285dfe323ea99419651f97094fdc1683f752.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-milan07/anat/sub-milan07_space-other_T1w_softseg_bin.json b/derivatives/labels_softseg_bin/sub-milan07/anat/sub-milan07_space-other_T1w_softseg_bin.json new file mode 100644 index 0000000000..f2e1189bfc --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-milan07/anat/sub-milan07_space-other_T1w_softseg_bin.json @@ -0,0 +1,4 @@ +{ + "Author": "Sandrine Bedard", + "Date": "2022-10-22 14:36:26" +} \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-milan07/anat/sub-milan07_space-other_T1w_softseg_bin.nii.gz b/derivatives/labels_softseg_bin/sub-milan07/anat/sub-milan07_space-other_T1w_softseg_bin.nii.gz new file mode 100644 index 0000000000..b8f99d74d3 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-milan07/anat/sub-milan07_space-other_T1w_softseg_bin.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s74975--9f5d205293adec289a285783d17ffd835d88af8c35f4d65fa8032af41badaa04.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-milan07/anat/sub-milan07_space-other_T2star_softseg_bin.json b/derivatives/labels_softseg_bin/sub-milan07/anat/sub-milan07_space-other_T2star_softseg_bin.json new file mode 100644 index 0000000000..f2e1189bfc --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-milan07/anat/sub-milan07_space-other_T2star_softseg_bin.json @@ -0,0 +1,4 @@ +{ + "Author": "Sandrine Bedard", + "Date": "2022-10-22 14:36:26" +} \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-milan07/anat/sub-milan07_space-other_T2star_softseg_bin.nii.gz b/derivatives/labels_softseg_bin/sub-milan07/anat/sub-milan07_space-other_T2star_softseg_bin.nii.gz new file mode 100644 index 0000000000..8221614db9 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-milan07/anat/sub-milan07_space-other_T2star_softseg_bin.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s14637--f9bfd43c75f486d813bc631a4d2d8d548e189e5c204edf73182cfe4a61d0ede5.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-milan07/anat/sub-milan07_space-other_T2w_softseg_bin.json b/derivatives/labels_softseg_bin/sub-milan07/anat/sub-milan07_space-other_T2w_softseg_bin.json new file mode 100644 index 0000000000..f2e1189bfc --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-milan07/anat/sub-milan07_space-other_T2w_softseg_bin.json @@ -0,0 +1,4 @@ +{ + "Author": "Sandrine Bedard", + "Date": "2022-10-22 14:36:26" +} \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-milan07/anat/sub-milan07_space-other_T2w_softseg_bin.nii.gz b/derivatives/labels_softseg_bin/sub-milan07/anat/sub-milan07_space-other_T2w_softseg_bin.nii.gz new file mode 100644 index 0000000000..4e22078dbf --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-milan07/anat/sub-milan07_space-other_T2w_softseg_bin.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s36585--e9d0082ffd3b0458256b56eeb0902c364d99d883045fc9f0b32e602aa40f58cd.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-milan07/dwi/sub-milan07_rec-average_dwi_softseg_bin.json b/derivatives/labels_softseg_bin/sub-milan07/dwi/sub-milan07_rec-average_dwi_softseg_bin.json new file mode 100644 index 0000000000..f2e1189bfc --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-milan07/dwi/sub-milan07_rec-average_dwi_softseg_bin.json @@ -0,0 +1,4 @@ +{ + "Author": "Sandrine Bedard", + "Date": "2022-10-22 14:36:26" +} \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-milan07/dwi/sub-milan07_rec-average_dwi_softseg_bin.nii.gz b/derivatives/labels_softseg_bin/sub-milan07/dwi/sub-milan07_rec-average_dwi_softseg_bin.nii.gz new file mode 100644 index 0000000000..5f4160ba1f --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-milan07/dwi/sub-milan07_rec-average_dwi_softseg_bin.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s932--0590f7a7679a6cf3823776044f1d7e11af81bb2a7a638b40bfdb45e6c5461afb.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-mniPilot1/anat/sub-mniPilot1_flip-1_mt-on_space-other_MTS_softseg_bin.json b/derivatives/labels_softseg_bin/sub-mniPilot1/anat/sub-mniPilot1_flip-1_mt-on_space-other_MTS_softseg_bin.json new file mode 100644 index 0000000000..f2e1189bfc --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-mniPilot1/anat/sub-mniPilot1_flip-1_mt-on_space-other_MTS_softseg_bin.json @@ -0,0 +1,4 @@ +{ + "Author": "Sandrine Bedard", + "Date": "2022-10-22 14:36:26" +} \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-mniPilot1/anat/sub-mniPilot1_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz b/derivatives/labels_softseg_bin/sub-mniPilot1/anat/sub-mniPilot1_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz new file mode 100644 index 0000000000..95e62cbac1 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-mniPilot1/anat/sub-mniPilot1_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s7300--fad49570d43abd6979b140130f42139f7a2d38b56ad3bd66bdbe5b7a5472484d.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-mniPilot1/anat/sub-mniPilot1_flip-2_mt-off_space-other_MTS_softseg_bin.json b/derivatives/labels_softseg_bin/sub-mniPilot1/anat/sub-mniPilot1_flip-2_mt-off_space-other_MTS_softseg_bin.json new file mode 100644 index 0000000000..f2e1189bfc --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-mniPilot1/anat/sub-mniPilot1_flip-2_mt-off_space-other_MTS_softseg_bin.json @@ -0,0 +1,4 @@ +{ + "Author": "Sandrine Bedard", + "Date": "2022-10-22 14:36:26" +} \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-mniPilot1/anat/sub-mniPilot1_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz b/derivatives/labels_softseg_bin/sub-mniPilot1/anat/sub-mniPilot1_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz new file mode 100644 index 0000000000..0a26a2709a --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-mniPilot1/anat/sub-mniPilot1_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s7225--a59c6076f7233bbf0aefe79cb82ad850c57dc556e1ec5599fd79cde63122c0a9.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-mniPilot1/anat/sub-mniPilot1_space-other_T1w_softseg_bin.json b/derivatives/labels_softseg_bin/sub-mniPilot1/anat/sub-mniPilot1_space-other_T1w_softseg_bin.json new file mode 100644 index 0000000000..f2e1189bfc --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-mniPilot1/anat/sub-mniPilot1_space-other_T1w_softseg_bin.json @@ -0,0 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b/derivatives/labels_softseg_bin/sub-mniS01/anat/sub-mniS01_flip-2_mt-off_space-other_MTS_softseg_bin.json @@ -0,0 +1,4 @@ +{ + "Author": "Sandrine Bedard", + "Date": "2022-10-22 14:36:27" +} \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-mniS01/anat/sub-mniS01_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz b/derivatives/labels_softseg_bin/sub-mniS01/anat/sub-mniS01_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz new file mode 100644 index 0000000000..48ebc3c7a7 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-mniS01/anat/sub-mniS01_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s7259--b9c328d3b70b049b3fcc968ebf713e45407e3105376c4b83f73cabd508861d13.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-mniS01/anat/sub-mniS01_space-other_T1w_softseg_bin.json b/derivatives/labels_softseg_bin/sub-mniS01/anat/sub-mniS01_space-other_T1w_softseg_bin.json new file mode 100644 index 0000000000..6517718c41 --- 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b/derivatives/labels_softseg_bin/sub-mniS01/anat/sub-mniS01_space-other_T2star_softseg_bin.json @@ -0,0 +1,4 @@ +{ + "Author": "Sandrine Bedard", + "Date": "2022-10-22 14:36:27" +} \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-mniS01/anat/sub-mniS01_space-other_T2star_softseg_bin.nii.gz b/derivatives/labels_softseg_bin/sub-mniS01/anat/sub-mniS01_space-other_T2star_softseg_bin.nii.gz new file mode 100644 index 0000000000..c211c383b5 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-mniS01/anat/sub-mniS01_space-other_T2star_softseg_bin.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s14682--80cc50e91a9821f93011fbf2e60e4c29763598f3607b96feba7fc0e3525e7608.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-mniS01/anat/sub-mniS01_space-other_T2w_softseg_bin.json b/derivatives/labels_softseg_bin/sub-mniS01/anat/sub-mniS01_space-other_T2w_softseg_bin.json new file mode 100644 index 0000000000..6517718c41 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-mniS01/anat/sub-mniS01_space-other_T2w_softseg_bin.json @@ -0,0 +1,4 @@ +{ + "Author": "Sandrine Bedard", + "Date": "2022-10-22 14:36:27" +} \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-mniS01/anat/sub-mniS01_space-other_T2w_softseg_bin.nii.gz b/derivatives/labels_softseg_bin/sub-mniS01/anat/sub-mniS01_space-other_T2w_softseg_bin.nii.gz new file mode 100644 index 0000000000..5af98b3941 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-mniS01/anat/sub-mniS01_space-other_T2w_softseg_bin.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s37075--b006d279124ac95aed2e0d2d84f479f82dcf5d6bb4e243c959535dd47a5b9ff7.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-mniS01/dwi/sub-mniS01_rec-average_dwi_softseg_bin.json b/derivatives/labels_softseg_bin/sub-mniS01/dwi/sub-mniS01_rec-average_dwi_softseg_bin.json new file mode 100644 index 0000000000..6517718c41 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-mniS01/dwi/sub-mniS01_rec-average_dwi_softseg_bin.json @@ -0,0 +1,4 @@ +{ + "Author": "Sandrine Bedard", + "Date": "2022-10-22 14:36:27" +} \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-mniS01/dwi/sub-mniS01_rec-average_dwi_softseg_bin.nii.gz b/derivatives/labels_softseg_bin/sub-mniS01/dwi/sub-mniS01_rec-average_dwi_softseg_bin.nii.gz new file mode 100644 index 0000000000..ea359122c1 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-mniS01/dwi/sub-mniS01_rec-average_dwi_softseg_bin.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s1004--3782796b3abf0c823ab23726c7759bdd8a92c582da5933395647c912727f5b01.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-mniS02/anat/sub-mniS02_flip-1_mt-on_space-other_MTS_softseg_bin.json b/derivatives/labels_softseg_bin/sub-mniS02/anat/sub-mniS02_flip-1_mt-on_space-other_MTS_softseg_bin.json new file mode 100644 index 0000000000..6517718c41 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-mniS02/anat/sub-mniS02_flip-1_mt-on_space-other_MTS_softseg_bin.json @@ -0,0 +1,4 @@ +{ + "Author": "Sandrine Bedard", + "Date": "2022-10-22 14:36:27" +} \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-mniS02/anat/sub-mniS02_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz b/derivatives/labels_softseg_bin/sub-mniS02/anat/sub-mniS02_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz new file mode 100644 index 0000000000..0011a99060 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-mniS02/anat/sub-mniS02_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s7227--dd3018ef0f62089d7ca14a94afd766073a9eb6889f8cb14a7b8416d87ecd5428.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-mniS02/anat/sub-mniS02_flip-2_mt-off_space-other_MTS_softseg_bin.json b/derivatives/labels_softseg_bin/sub-mniS02/anat/sub-mniS02_flip-2_mt-off_space-other_MTS_softseg_bin.json new file mode 100644 index 0000000000..6517718c41 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-mniS02/anat/sub-mniS02_flip-2_mt-off_space-other_MTS_softseg_bin.json @@ -0,0 +1,4 @@ +{ + "Author": "Sandrine Bedard", + "Date": "2022-10-22 14:36:27" +} \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-mniS02/anat/sub-mniS02_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz b/derivatives/labels_softseg_bin/sub-mniS02/anat/sub-mniS02_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz new file mode 100644 index 0000000000..a5d942293c --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-mniS02/anat/sub-mniS02_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s7144--07ba52a92cf5578338e38e89eb5a0a3693147d1c9deba04f3599882f27fd3c32.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-mniS02/anat/sub-mniS02_space-other_T1w_softseg_bin.json b/derivatives/labels_softseg_bin/sub-mniS02/anat/sub-mniS02_space-other_T1w_softseg_bin.json new file mode 100644 index 0000000000..6517718c41 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-mniS02/anat/sub-mniS02_space-other_T1w_softseg_bin.json @@ -0,0 +1,4 @@ +{ + "Author": "Sandrine Bedard", + "Date": "2022-10-22 14:36:27" +} \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-mniS02/anat/sub-mniS02_space-other_T1w_softseg_bin.nii.gz b/derivatives/labels_softseg_bin/sub-mniS02/anat/sub-mniS02_space-other_T1w_softseg_bin.nii.gz new file mode 100644 index 0000000000..9bb6dff76d --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-mniS02/anat/sub-mniS02_space-other_T1w_softseg_bin.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s74955--c52416db89d9482cf9f376900d16851298f58811f320350ca1ffbcd16af54b41.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-mniS02/anat/sub-mniS02_space-other_T2star_softseg_bin.json b/derivatives/labels_softseg_bin/sub-mniS02/anat/sub-mniS02_space-other_T2star_softseg_bin.json new file mode 100644 index 0000000000..6517718c41 --- 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b/derivatives/labels_softseg_bin/sub-mniS02/anat/sub-mniS02_space-other_T2w_softseg_bin.json @@ -0,0 +1,4 @@ +{ + "Author": "Sandrine Bedard", + "Date": "2022-10-22 14:36:27" +} \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-mniS02/anat/sub-mniS02_space-other_T2w_softseg_bin.nii.gz b/derivatives/labels_softseg_bin/sub-mniS02/anat/sub-mniS02_space-other_T2w_softseg_bin.nii.gz new file mode 100644 index 0000000000..56f048c628 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-mniS02/anat/sub-mniS02_space-other_T2w_softseg_bin.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s37000--544cf48606bcf2f9e1bee862dd7ec79fdcd94dde16139d09ab0a13715b67e229.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-mniS02/dwi/sub-mniS02_rec-average_dwi_softseg_bin.json b/derivatives/labels_softseg_bin/sub-mniS02/dwi/sub-mniS02_rec-average_dwi_softseg_bin.json new file mode 100644 index 0000000000..6517718c41 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-mniS02/dwi/sub-mniS02_rec-average_dwi_softseg_bin.json @@ -0,0 +1,4 @@ +{ + "Author": "Sandrine Bedard", + "Date": "2022-10-22 14:36:27" +} \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-mniS02/dwi/sub-mniS02_rec-average_dwi_softseg_bin.nii.gz b/derivatives/labels_softseg_bin/sub-mniS02/dwi/sub-mniS02_rec-average_dwi_softseg_bin.nii.gz new file mode 100644 index 0000000000..5f97eefdce --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-mniS02/dwi/sub-mniS02_rec-average_dwi_softseg_bin.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s943--cb06138ce03b4121e83cfae4a92ff0293aad817719ae78a172027ece43841db8.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-mniS03/anat/sub-mniS03_flip-1_mt-on_space-other_MTS_softseg_bin.json b/derivatives/labels_softseg_bin/sub-mniS03/anat/sub-mniS03_flip-1_mt-on_space-other_MTS_softseg_bin.json new file mode 100644 index 0000000000..6517718c41 --- /dev/null +++ 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b/derivatives/labels_softseg_bin/sub-mniS03/dwi/sub-mniS03_rec-average_dwi_softseg_bin.json @@ -0,0 +1,4 @@ +{ + "Author": "Sandrine Bedard", + "Date": "2022-10-22 14:36:27" +} \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-mniS03/dwi/sub-mniS03_rec-average_dwi_softseg_bin.nii.gz b/derivatives/labels_softseg_bin/sub-mniS03/dwi/sub-mniS03_rec-average_dwi_softseg_bin.nii.gz new file mode 100644 index 0000000000..f134851b2d --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-mniS03/dwi/sub-mniS03_rec-average_dwi_softseg_bin.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s914--31c54499713f874eacb2c96422133aa6a26b40c380ad26a4d8dbb175284cfec5.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-mniS04/anat/sub-mniS04_flip-1_mt-on_space-other_MTS_softseg_bin.json b/derivatives/labels_softseg_bin/sub-mniS04/anat/sub-mniS04_flip-1_mt-on_space-other_MTS_softseg_bin.json new file mode 100644 index 0000000000..6517718c41 --- /dev/null +++ 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b/derivatives/labels_softseg_bin/sub-mniS06/anat/sub-mniS06_space-other_T2w_softseg_bin.json @@ -0,0 +1,4 @@ +{ + "Author": "Sandrine Bedard", + "Date": "2022-10-22 14:36:28" +} \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-mniS06/anat/sub-mniS06_space-other_T2w_softseg_bin.nii.gz b/derivatives/labels_softseg_bin/sub-mniS06/anat/sub-mniS06_space-other_T2w_softseg_bin.nii.gz new file mode 100644 index 0000000000..4e9670e73e --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-mniS06/anat/sub-mniS06_space-other_T2w_softseg_bin.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s38271--449791bb56bd521eddb440ab9d0eb3164d9218177e3830b5c43716e5265f6627.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-mniS06/dwi/sub-mniS06_rec-average_dwi_softseg_bin.json b/derivatives/labels_softseg_bin/sub-mniS06/dwi/sub-mniS06_rec-average_dwi_softseg_bin.json new file mode 100644 index 0000000000..e74ad52ef6 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-mniS06/dwi/sub-mniS06_rec-average_dwi_softseg_bin.json @@ -0,0 +1,4 @@ +{ + "Author": "Sandrine Bedard", + "Date": "2022-10-22 14:36:28" +} \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-mniS06/dwi/sub-mniS06_rec-average_dwi_softseg_bin.nii.gz b/derivatives/labels_softseg_bin/sub-mniS06/dwi/sub-mniS06_rec-average_dwi_softseg_bin.nii.gz new file mode 100644 index 0000000000..07356dcb71 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-mniS06/dwi/sub-mniS06_rec-average_dwi_softseg_bin.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s1061--1c8d40b629b1566d5a2f8b48faae4a56b5f9bc7e40c58d4bfea590de0463159a.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-mniS07/anat/sub-mniS07_flip-1_mt-on_space-other_MTS_softseg_bin.json b/derivatives/labels_softseg_bin/sub-mniS07/anat/sub-mniS07_flip-1_mt-on_space-other_MTS_softseg_bin.json new file mode 100644 index 0000000000..e74ad52ef6 --- /dev/null +++ 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b/derivatives/labels_softseg_bin/sub-mniS08/anat/sub-mniS08_space-other_T2w_softseg_bin.json @@ -0,0 +1,4 @@ +{ + "Author": "Sandrine Bedard", + "Date": "2022-10-22 14:36:29" +} \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-mniS08/anat/sub-mniS08_space-other_T2w_softseg_bin.nii.gz b/derivatives/labels_softseg_bin/sub-mniS08/anat/sub-mniS08_space-other_T2w_softseg_bin.nii.gz new file mode 100644 index 0000000000..30594c1254 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-mniS08/anat/sub-mniS08_space-other_T2w_softseg_bin.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s37050--f5838045a1ac9d247e6ff4cba29051ba111f40ba49df6501f17cfee7c0c45ab2.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-mniS08/dwi/sub-mniS08_rec-average_dwi_softseg_bin.json b/derivatives/labels_softseg_bin/sub-mniS08/dwi/sub-mniS08_rec-average_dwi_softseg_bin.json new file mode 100644 index 0000000000..ffe50aeddb --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-mniS08/dwi/sub-mniS08_rec-average_dwi_softseg_bin.json @@ -0,0 +1,4 @@ +{ + "Author": "Sandrine Bedard", + "Date": "2022-10-22 14:36:29" +} \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-mniS08/dwi/sub-mniS08_rec-average_dwi_softseg_bin.nii.gz b/derivatives/labels_softseg_bin/sub-mniS08/dwi/sub-mniS08_rec-average_dwi_softseg_bin.nii.gz new file mode 100644 index 0000000000..f3b01d587b --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-mniS08/dwi/sub-mniS08_rec-average_dwi_softseg_bin.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s998--e8527243a9441d89a4017154b0a91e3fa1681d297bdf9a3754613a74923bf4a3.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-mniS09/anat/sub-mniS09_flip-1_mt-on_space-other_MTS_softseg_bin.json b/derivatives/labels_softseg_bin/sub-mniS09/anat/sub-mniS09_flip-1_mt-on_space-other_MTS_softseg_bin.json new file mode 100644 index 0000000000..ffe50aeddb --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-mniS09/anat/sub-mniS09_flip-1_mt-on_space-other_MTS_softseg_bin.json @@ -0,0 +1,4 @@ +{ + "Author": "Sandrine Bedard", + "Date": "2022-10-22 14:36:29" +} \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-mniS09/anat/sub-mniS09_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz b/derivatives/labels_softseg_bin/sub-mniS09/anat/sub-mniS09_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz new file mode 100644 index 0000000000..45e5959a9e --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-mniS09/anat/sub-mniS09_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s7261--c7d101c045bfa9b6520d0a22547499d802ed1fa4b66ed5cac9cf75801a3bb69f.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-mniS09/anat/sub-mniS09_flip-2_mt-off_space-other_MTS_softseg_bin.json b/derivatives/labels_softseg_bin/sub-mniS09/anat/sub-mniS09_flip-2_mt-off_space-other_MTS_softseg_bin.json new file mode 100644 index 0000000000..ffe50aeddb --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-mniS09/anat/sub-mniS09_flip-2_mt-off_space-other_MTS_softseg_bin.json @@ -0,0 +1,4 @@ +{ + "Author": "Sandrine Bedard", + "Date": "2022-10-22 14:36:29" +} \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-mniS09/anat/sub-mniS09_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz b/derivatives/labels_softseg_bin/sub-mniS09/anat/sub-mniS09_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz new file mode 100644 index 0000000000..3a7ed6b17b --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-mniS09/anat/sub-mniS09_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s7139--ee138355e24dae0ff021f7096b6b80ff43874788a921cc79ea290e773ea9b766.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-mniS09/anat/sub-mniS09_space-other_T1w_softseg_bin.json b/derivatives/labels_softseg_bin/sub-mniS09/anat/sub-mniS09_space-other_T1w_softseg_bin.json new file mode 100644 index 0000000000..ffe50aeddb --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-mniS09/anat/sub-mniS09_space-other_T1w_softseg_bin.json @@ -0,0 +1,4 @@ +{ + "Author": "Sandrine Bedard", + "Date": "2022-10-22 14:36:29" +} \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-mniS09/anat/sub-mniS09_space-other_T1w_softseg_bin.nii.gz b/derivatives/labels_softseg_bin/sub-mniS09/anat/sub-mniS09_space-other_T1w_softseg_bin.nii.gz new file mode 100644 index 0000000000..a6e7f70c5f --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-mniS09/anat/sub-mniS09_space-other_T1w_softseg_bin.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s75269--c4526c78b97fdc6a0f6a7e857a46428128f123b445fc432f9e9153a7c83bc6e1.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-mniS09/anat/sub-mniS09_space-other_T2star_softseg_bin.json b/derivatives/labels_softseg_bin/sub-mniS09/anat/sub-mniS09_space-other_T2star_softseg_bin.json new file mode 100644 index 0000000000..ffe50aeddb --- 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b/derivatives/labels_softseg_bin/sub-mniS09/anat/sub-mniS09_space-other_T2w_softseg_bin.json @@ -0,0 +1,4 @@ +{ + "Author": "Sandrine Bedard", + "Date": "2022-10-22 14:36:29" +} \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-mniS09/anat/sub-mniS09_space-other_T2w_softseg_bin.nii.gz b/derivatives/labels_softseg_bin/sub-mniS09/anat/sub-mniS09_space-other_T2w_softseg_bin.nii.gz new file mode 100644 index 0000000000..316400729b --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-mniS09/anat/sub-mniS09_space-other_T2w_softseg_bin.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s37158--7afbd3b5ebba56476075586482f6954582bc2726460413b0ca8a22eca2aa48b5.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-mniS09/dwi/sub-mniS09_rec-average_dwi_softseg_bin.json b/derivatives/labels_softseg_bin/sub-mniS09/dwi/sub-mniS09_rec-average_dwi_softseg_bin.json new file mode 100644 index 0000000000..ffe50aeddb --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-mniS09/dwi/sub-mniS09_rec-average_dwi_softseg_bin.json @@ -0,0 +1,4 @@ +{ + "Author": "Sandrine Bedard", + "Date": "2022-10-22 14:36:29" +} \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-mniS09/dwi/sub-mniS09_rec-average_dwi_softseg_bin.nii.gz b/derivatives/labels_softseg_bin/sub-mniS09/dwi/sub-mniS09_rec-average_dwi_softseg_bin.nii.gz new file mode 100644 index 0000000000..1780cc45be --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-mniS09/dwi/sub-mniS09_rec-average_dwi_softseg_bin.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s1030--6c5726f51b6045d3875cb5ce062130df090baa90ad2fd0806d59b8714fce32d6.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-mountSinai01/anat/sub-mountSinai01_flip-1_mt-on_space-other_MTS_softseg_bin.json b/derivatives/labels_softseg_bin/sub-mountSinai01/anat/sub-mountSinai01_flip-1_mt-on_space-other_MTS_softseg_bin.json new file mode 100644 index 0000000000..ffe50aeddb --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-mountSinai01/anat/sub-mountSinai01_flip-1_mt-on_space-other_MTS_softseg_bin.json @@ -0,0 +1,4 @@ +{ + "Author": "Sandrine Bedard", + "Date": "2022-10-22 14:36:29" +} \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-mountSinai01/anat/sub-mountSinai01_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz b/derivatives/labels_softseg_bin/sub-mountSinai01/anat/sub-mountSinai01_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz new file mode 100644 index 0000000000..c15a044f35 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-mountSinai01/anat/sub-mountSinai01_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s7299--808fb49d61f14fe129bf8306911df9d018a338372646cb79fed6c8bdc053ff88.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-mountSinai01/anat/sub-mountSinai01_flip-2_mt-off_space-other_MTS_softseg_bin.json 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b/derivatives/labels_softseg_bin/sub-mountSinai01/anat/sub-mountSinai01_space-other_T2star_softseg_bin.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s14629--0a310fb46b934cd8f42889724e41ce1b7d765375d9d62ef1cbe4884cafdd4633.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-mountSinai01/anat/sub-mountSinai01_space-other_T2w_softseg_bin.json b/derivatives/labels_softseg_bin/sub-mountSinai01/anat/sub-mountSinai01_space-other_T2w_softseg_bin.json new file mode 100644 index 0000000000..ffe50aeddb --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-mountSinai01/anat/sub-mountSinai01_space-other_T2w_softseg_bin.json @@ -0,0 +1,4 @@ +{ + "Author": "Sandrine Bedard", + "Date": "2022-10-22 14:36:29" +} \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-mountSinai01/anat/sub-mountSinai01_space-other_T2w_softseg_bin.nii.gz b/derivatives/labels_softseg_bin/sub-mountSinai01/anat/sub-mountSinai01_space-other_T2w_softseg_bin.nii.gz new file mode 100644 index 0000000000..9c780ffb66 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-mountSinai01/anat/sub-mountSinai01_space-other_T2w_softseg_bin.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s37220--757c253c4da902ab14324191e1819c0de6cb743a8f7abd7b764360e0f043cd5d.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-mountSinai01/dwi/sub-mountSinai01_rec-average_dwi_softseg_bin.json b/derivatives/labels_softseg_bin/sub-mountSinai01/dwi/sub-mountSinai01_rec-average_dwi_softseg_bin.json new file mode 100644 index 0000000000..ffe50aeddb --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-mountSinai01/dwi/sub-mountSinai01_rec-average_dwi_softseg_bin.json @@ -0,0 +1,4 @@ +{ + "Author": "Sandrine Bedard", + "Date": "2022-10-22 14:36:29" +} \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-mountSinai01/dwi/sub-mountSinai01_rec-average_dwi_softseg_bin.nii.gz b/derivatives/labels_softseg_bin/sub-mountSinai01/dwi/sub-mountSinai01_rec-average_dwi_softseg_bin.nii.gz new file mode 100644 index 0000000000..51ca4401c6 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-mountSinai01/dwi/sub-mountSinai01_rec-average_dwi_softseg_bin.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s1045--0a23270afcffd124a9df3b45e8d4bcdbc26f42a9bfc02d5a2f4e8e033ba2e625.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-mountSinai02/anat/sub-mountSinai02_flip-1_mt-on_space-other_MTS_softseg_bin.json b/derivatives/labels_softseg_bin/sub-mountSinai02/anat/sub-mountSinai02_flip-1_mt-on_space-other_MTS_softseg_bin.json new file mode 100644 index 0000000000..ffe50aeddb --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-mountSinai02/anat/sub-mountSinai02_flip-1_mt-on_space-other_MTS_softseg_bin.json @@ -0,0 +1,4 @@ +{ + "Author": "Sandrine Bedard", + "Date": "2022-10-22 14:36:29" +} \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-mountSinai02/anat/sub-mountSinai02_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz 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a/derivatives/labels_softseg_bin/sub-mountSinai02/anat/sub-mountSinai02_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz b/derivatives/labels_softseg_bin/sub-mountSinai02/anat/sub-mountSinai02_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz new file mode 100644 index 0000000000..a515356f80 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-mountSinai02/anat/sub-mountSinai02_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s7204--a0d6c7e549826af275b1a19053badd2a914d1d2b5baf3ea26102da4c52cd48c6.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-mountSinai02/anat/sub-mountSinai02_space-other_T1w_softseg_bin.json b/derivatives/labels_softseg_bin/sub-mountSinai02/anat/sub-mountSinai02_space-other_T1w_softseg_bin.json new file mode 100644 index 0000000000..ffe50aeddb --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-mountSinai02/anat/sub-mountSinai02_space-other_T1w_softseg_bin.json @@ -0,0 +1,4 @@ +{ + "Author": "Sandrine Bedard", + "Date": "2022-10-22 14:36:29" +} \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-mountSinai02/anat/sub-mountSinai02_space-other_T1w_softseg_bin.nii.gz b/derivatives/labels_softseg_bin/sub-mountSinai02/anat/sub-mountSinai02_space-other_T1w_softseg_bin.nii.gz new file mode 100644 index 0000000000..98fab45cdf --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-mountSinai02/anat/sub-mountSinai02_space-other_T1w_softseg_bin.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s75483--eb368b33302a17fd643eb3e2d1c5f4c27d72738c828e52c4eb85bd77df5df6b5.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-mountSinai02/anat/sub-mountSinai02_space-other_T2star_softseg_bin.json b/derivatives/labels_softseg_bin/sub-mountSinai02/anat/sub-mountSinai02_space-other_T2star_softseg_bin.json new file mode 100644 index 0000000000..ffe50aeddb --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-mountSinai02/anat/sub-mountSinai02_space-other_T2star_softseg_bin.json @@ -0,0 +1,4 @@ +{ + "Author": "Sandrine Bedard", + "Date": "2022-10-22 14:36:29" +} \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-mountSinai02/anat/sub-mountSinai02_space-other_T2star_softseg_bin.nii.gz b/derivatives/labels_softseg_bin/sub-mountSinai02/anat/sub-mountSinai02_space-other_T2star_softseg_bin.nii.gz new file mode 100644 index 0000000000..3740167195 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-mountSinai02/anat/sub-mountSinai02_space-other_T2star_softseg_bin.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s14738--92349623ec46882dbd6a612f22859ddfc03c16fb64b78972d3c310e13c3e2334.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-mountSinai02/anat/sub-mountSinai02_space-other_T2w_softseg_bin.json b/derivatives/labels_softseg_bin/sub-mountSinai02/anat/sub-mountSinai02_space-other_T2w_softseg_bin.json new file mode 100644 index 0000000000..ffe50aeddb --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-mountSinai02/anat/sub-mountSinai02_space-other_T2w_softseg_bin.json @@ -0,0 +1,4 @@ +{ + "Author": "Sandrine Bedard", + "Date": "2022-10-22 14:36:29" +} \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-mountSinai02/anat/sub-mountSinai02_space-other_T2w_softseg_bin.nii.gz b/derivatives/labels_softseg_bin/sub-mountSinai02/anat/sub-mountSinai02_space-other_T2w_softseg_bin.nii.gz new file mode 100644 index 0000000000..a11f1f82a9 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-mountSinai02/anat/sub-mountSinai02_space-other_T2w_softseg_bin.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s37223--56b5a3cd1335425f6fee2e3b4013bb47e67355a6f2cee30789b9137e3f9998d0.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-mountSinai02/dwi/sub-mountSinai02_rec-average_dwi_softseg_bin.json b/derivatives/labels_softseg_bin/sub-mountSinai02/dwi/sub-mountSinai02_rec-average_dwi_softseg_bin.json new file mode 100644 index 0000000000..ffe50aeddb --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-mountSinai02/dwi/sub-mountSinai02_rec-average_dwi_softseg_bin.json @@ -0,0 +1,4 @@ +{ + "Author": "Sandrine Bedard", + "Date": "2022-10-22 14:36:29" +} \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-mountSinai02/dwi/sub-mountSinai02_rec-average_dwi_softseg_bin.nii.gz b/derivatives/labels_softseg_bin/sub-mountSinai02/dwi/sub-mountSinai02_rec-average_dwi_softseg_bin.nii.gz new file mode 100644 index 0000000000..d6ad451173 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-mountSinai02/dwi/sub-mountSinai02_rec-average_dwi_softseg_bin.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s1008--1ccce3ed72348bf9942f861015e821c00089be97d757f01f8992abadb631d7e5.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-mountSinai04/anat/sub-mountSinai04_flip-1_mt-on_space-other_MTS_softseg_bin.json 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b/derivatives/labels_softseg_bin/sub-mountSinai04/anat/sub-mountSinai04_space-other_T1w_softseg_bin.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s74961--552fdb742cfc3e474be8bbe7a447d13ef50d9666ab8b02942fbfd3684219299e.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-mountSinai04/anat/sub-mountSinai04_space-other_T2star_softseg_bin.json b/derivatives/labels_softseg_bin/sub-mountSinai04/anat/sub-mountSinai04_space-other_T2star_softseg_bin.json new file mode 100644 index 0000000000..48481e7812 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-mountSinai04/anat/sub-mountSinai04_space-other_T2star_softseg_bin.json @@ -0,0 +1,4 @@ +{ + "Author": "Sandrine Bedard", + "Date": "2022-10-22 14:36:30" +} \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-mountSinai04/anat/sub-mountSinai04_space-other_T2star_softseg_bin.nii.gz b/derivatives/labels_softseg_bin/sub-mountSinai04/anat/sub-mountSinai04_space-other_T2star_softseg_bin.nii.gz new file mode 100644 index 0000000000..60b607e6b3 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-mountSinai04/anat/sub-mountSinai04_space-other_T2star_softseg_bin.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s14791--8b6a2a473cb563b0367fbf3a14c700394bc04d7217bab65be2dd7146f905d161.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-mountSinai04/anat/sub-mountSinai04_space-other_T2w_softseg_bin.json b/derivatives/labels_softseg_bin/sub-mountSinai04/anat/sub-mountSinai04_space-other_T2w_softseg_bin.json new file mode 100644 index 0000000000..48481e7812 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-mountSinai04/anat/sub-mountSinai04_space-other_T2w_softseg_bin.json @@ -0,0 +1,4 @@ +{ + "Author": "Sandrine Bedard", + "Date": "2022-10-22 14:36:30" +} \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-mountSinai04/anat/sub-mountSinai04_space-other_T2w_softseg_bin.nii.gz b/derivatives/labels_softseg_bin/sub-mountSinai04/anat/sub-mountSinai04_space-other_T2w_softseg_bin.nii.gz new file mode 100644 index 0000000000..85b6f44704 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-mountSinai04/anat/sub-mountSinai04_space-other_T2w_softseg_bin.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s37267--a6296e0201430b48303ad70042a56aad1a2adc69835275a466c656ac30b419c6.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-mountSinai04/dwi/sub-mountSinai04_rec-average_dwi_softseg_bin.json b/derivatives/labels_softseg_bin/sub-mountSinai04/dwi/sub-mountSinai04_rec-average_dwi_softseg_bin.json new file mode 100644 index 0000000000..48481e7812 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-mountSinai04/dwi/sub-mountSinai04_rec-average_dwi_softseg_bin.json @@ -0,0 +1,4 @@ +{ + "Author": "Sandrine Bedard", + "Date": "2022-10-22 14:36:30" +} \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-mountSinai04/dwi/sub-mountSinai04_rec-average_dwi_softseg_bin.nii.gz 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a/derivatives/labels_softseg_bin/sub-mountSinai05/anat/sub-mountSinai05_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz b/derivatives/labels_softseg_bin/sub-mountSinai05/anat/sub-mountSinai05_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz new file mode 100644 index 0000000000..925896767a --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-mountSinai05/anat/sub-mountSinai05_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s7279--49180a22403848510efd04d9ebc5585d12fd3bc8b40c9242519b1951bce7d18b.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-mountSinai05/anat/sub-mountSinai05_flip-2_mt-off_space-other_MTS_softseg_bin.json b/derivatives/labels_softseg_bin/sub-mountSinai05/anat/sub-mountSinai05_flip-2_mt-off_space-other_MTS_softseg_bin.json new file mode 100644 index 0000000000..48481e7812 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-mountSinai05/anat/sub-mountSinai05_flip-2_mt-off_space-other_MTS_softseg_bin.json @@ -0,0 +1,4 @@ +{ 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b/derivatives/labels_softseg_bin/sub-mountSinai05/anat/sub-mountSinai05_space-other_T1w_softseg_bin.json @@ -0,0 +1,4 @@ +{ + "Author": "Sandrine Bedard", + "Date": "2022-10-22 14:36:30" +} \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-mountSinai05/anat/sub-mountSinai05_space-other_T1w_softseg_bin.nii.gz b/derivatives/labels_softseg_bin/sub-mountSinai05/anat/sub-mountSinai05_space-other_T1w_softseg_bin.nii.gz new file mode 100644 index 0000000000..9be4d7258a --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-mountSinai05/anat/sub-mountSinai05_space-other_T1w_softseg_bin.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s74821--a71a7ce87f3b675bd6cc44d5ae7793dcc0b5276e0eb7a82af3fbea80c009eee7.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-mountSinai05/anat/sub-mountSinai05_space-other_T2star_softseg_bin.json b/derivatives/labels_softseg_bin/sub-mountSinai05/anat/sub-mountSinai05_space-other_T2star_softseg_bin.json new file mode 100644 index 0000000000..48481e7812 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-mountSinai05/anat/sub-mountSinai05_space-other_T2star_softseg_bin.json @@ -0,0 +1,4 @@ +{ + "Author": "Sandrine Bedard", + "Date": "2022-10-22 14:36:30" +} \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-mountSinai05/anat/sub-mountSinai05_space-other_T2star_softseg_bin.nii.gz b/derivatives/labels_softseg_bin/sub-mountSinai05/anat/sub-mountSinai05_space-other_T2star_softseg_bin.nii.gz new file mode 100644 index 0000000000..db09476dd7 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-mountSinai05/anat/sub-mountSinai05_space-other_T2star_softseg_bin.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s14755--a386940fff5460745da0882cb53e309fdf17420f20e0f446cb431b2c965548f7.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-mountSinai05/anat/sub-mountSinai05_space-other_T2w_softseg_bin.json 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Bedard", + "Date": "2022-10-22 14:36:32" +} \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-mpicbs06/anat/sub-mpicbs06_space-other_T2star_softseg_bin.nii.gz b/derivatives/labels_softseg_bin/sub-mpicbs06/anat/sub-mpicbs06_space-other_T2star_softseg_bin.nii.gz new file mode 100644 index 0000000000..4794fe6a73 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-mpicbs06/anat/sub-mpicbs06_space-other_T2star_softseg_bin.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s14661--921721949fb7ac23375c6c0a897135e5ccd5f8807dceff43baac258c350144f4.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-mpicbs06/anat/sub-mpicbs06_space-other_T2w_softseg_bin.json b/derivatives/labels_softseg_bin/sub-mpicbs06/anat/sub-mpicbs06_space-other_T2w_softseg_bin.json new file mode 100644 index 0000000000..aa0f5abf87 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-mpicbs06/anat/sub-mpicbs06_space-other_T2w_softseg_bin.json @@ -0,0 +1,4 @@ +{ + "Author": "Sandrine Bedard", + 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b/derivatives/labels_softseg_bin/sub-nwu01/anat/sub-nwu01_space-other_T1w_softseg_bin.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s76128--b310f3592eb62b2e38d090feeb3d35f52123cc0175fb4f0e1f16ee8dec861e26.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-nwu01/anat/sub-nwu01_space-other_T2star_softseg_bin.json b/derivatives/labels_softseg_bin/sub-nwu01/anat/sub-nwu01_space-other_T2star_softseg_bin.json new file mode 100644 index 0000000000..8eed774096 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-nwu01/anat/sub-nwu01_space-other_T2star_softseg_bin.json @@ -0,0 +1,4 @@ +{ + "Author": "Sandrine Bedard", + "Date": "2022-10-22 14:36:34" +} \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-nwu01/anat/sub-nwu01_space-other_T2star_softseg_bin.nii.gz b/derivatives/labels_softseg_bin/sub-nwu01/anat/sub-nwu01_space-other_T2star_softseg_bin.nii.gz new file mode 100644 index 0000000000..184bf9a84d --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-nwu01/anat/sub-nwu01_space-other_T2star_softseg_bin.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s14692--7ab8662f908b026cc81f7fec3d5018f0e91c0c25e25d287be6c3b6c264fee055.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-nwu01/anat/sub-nwu01_space-other_T2w_softseg_bin.json b/derivatives/labels_softseg_bin/sub-nwu01/anat/sub-nwu01_space-other_T2w_softseg_bin.json new file mode 100644 index 0000000000..8eed774096 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-nwu01/anat/sub-nwu01_space-other_T2w_softseg_bin.json @@ -0,0 +1,4 @@ +{ + "Author": "Sandrine Bedard", + "Date": "2022-10-22 14:36:34" +} \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-nwu01/anat/sub-nwu01_space-other_T2w_softseg_bin.nii.gz b/derivatives/labels_softseg_bin/sub-nwu01/anat/sub-nwu01_space-other_T2w_softseg_bin.nii.gz new file mode 100644 index 0000000000..5acd5da1b1 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-nwu01/anat/sub-nwu01_space-other_T2w_softseg_bin.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s38885--f94c148cc98191c9f4c0b7952acb488ecf669957d3610c4406587405a7f54782.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-nwu01/dwi/sub-nwu01_rec-average_dwi_softseg_bin.json b/derivatives/labels_softseg_bin/sub-nwu01/dwi/sub-nwu01_rec-average_dwi_softseg_bin.json new file mode 100644 index 0000000000..8eed774096 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-nwu01/dwi/sub-nwu01_rec-average_dwi_softseg_bin.json @@ -0,0 +1,4 @@ +{ + "Author": "Sandrine Bedard", + "Date": "2022-10-22 14:36:34" +} \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-nwu01/dwi/sub-nwu01_rec-average_dwi_softseg_bin.nii.gz b/derivatives/labels_softseg_bin/sub-nwu01/dwi/sub-nwu01_rec-average_dwi_softseg_bin.nii.gz new file mode 100644 index 0000000000..32adafde36 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-nwu01/dwi/sub-nwu01_rec-average_dwi_softseg_bin.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s960--d8e361caf3822879e04a1f89c71e7c32965bb615e88353f360b95b991d60c4a5.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-nwu02/anat/sub-nwu02_flip-1_mt-on_space-other_MTS_softseg_bin.json b/derivatives/labels_softseg_bin/sub-nwu02/anat/sub-nwu02_flip-1_mt-on_space-other_MTS_softseg_bin.json new file mode 100644 index 0000000000..8eed774096 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-nwu02/anat/sub-nwu02_flip-1_mt-on_space-other_MTS_softseg_bin.json @@ -0,0 +1,4 @@ +{ + "Author": "Sandrine Bedard", + "Date": "2022-10-22 14:36:34" +} \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-nwu02/anat/sub-nwu02_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz b/derivatives/labels_softseg_bin/sub-nwu02/anat/sub-nwu02_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz new file mode 100644 index 0000000000..0e7b91e774 --- /dev/null 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"Date": "2022-10-22 14:36:39" +} \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-oxfordOhba05/anat/sub-oxfordOhba05_space-other_T2w_softseg_bin.nii.gz b/derivatives/labels_softseg_bin/sub-oxfordOhba05/anat/sub-oxfordOhba05_space-other_T2w_softseg_bin.nii.gz new file mode 100644 index 0000000000..cecd04f923 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-oxfordOhba05/anat/sub-oxfordOhba05_space-other_T2w_softseg_bin.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s38149--30f107c4274d75e908303f95f5dca0aa14bf3ed4f86453ee2ba9cc134d588019.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-oxfordOhba05/dwi/sub-oxfordOhba05_rec-average_dwi_softseg_bin.json b/derivatives/labels_softseg_bin/sub-oxfordOhba05/dwi/sub-oxfordOhba05_rec-average_dwi_softseg_bin.json new file mode 100644 index 0000000000..7b61e22a16 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-oxfordOhba05/dwi/sub-oxfordOhba05_rec-average_dwi_softseg_bin.json @@ -0,0 +1,4 @@ +{ + "Author": 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b/derivatives/labels_softseg_bin/sub-queensland06/anat/sub-queensland06_space-other_T2w_softseg_bin.json @@ -0,0 +1,4 @@ +{ + "Author": "Sandrine Bedard", + "Date": "2022-10-22 14:36:43" +} \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-queensland06/anat/sub-queensland06_space-other_T2w_softseg_bin.nii.gz b/derivatives/labels_softseg_bin/sub-queensland06/anat/sub-queensland06_space-other_T2w_softseg_bin.nii.gz new file mode 100644 index 0000000000..344dbb2fe0 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-queensland06/anat/sub-queensland06_space-other_T2w_softseg_bin.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s36963--145eb49e4e3e063af9529e03fdc70cc0498309a332a5fe35b5b249b5df5fb93f.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-queensland06/dwi/sub-queensland06_rec-average_dwi_softseg_bin.json b/derivatives/labels_softseg_bin/sub-queensland06/dwi/sub-queensland06_rec-average_dwi_softseg_bin.json new file mode 100644 index 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end of file diff --git a/derivatives/labels_softseg_bin/sub-stanford01/anat/sub-stanford01_space-other_T2w_softseg_bin.nii.gz b/derivatives/labels_softseg_bin/sub-stanford01/anat/sub-stanford01_space-other_T2w_softseg_bin.nii.gz new file mode 100644 index 0000000000..1013d7798f --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-stanford01/anat/sub-stanford01_space-other_T2w_softseg_bin.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s34793--bddb1593d702a524a8d9929816f526286979e3c20b3f213a633bdda8fa16fddf.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-stanford01/dwi/sub-stanford01_rec-average_dwi_softseg_bin.json b/derivatives/labels_softseg_bin/sub-stanford01/dwi/sub-stanford01_rec-average_dwi_softseg_bin.json new file mode 100644 index 0000000000..ed8f653a86 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-stanford01/dwi/sub-stanford01_rec-average_dwi_softseg_bin.json @@ -0,0 +1,4 @@ +{ + "Author": "Sandrine Bedard", + "Date": "2022-10-22 14:36:45" +} \ No newline at 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end of file diff --git a/derivatives/labels_softseg_bin/sub-tokyo750w02/anat/sub-tokyo750w02_space-other_T2star_softseg_bin.nii.gz b/derivatives/labels_softseg_bin/sub-tokyo750w02/anat/sub-tokyo750w02_space-other_T2star_softseg_bin.nii.gz new file mode 100644 index 0000000000..919046ea0d --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-tokyo750w02/anat/sub-tokyo750w02_space-other_T2star_softseg_bin.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s23315--2f1aa8febc50f7a83eee5f3fc1e888599a3fe28fdd7fcc42889f8781e83a148b.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-tokyo750w02/anat/sub-tokyo750w02_space-other_T2w_softseg_bin.json b/derivatives/labels_softseg_bin/sub-tokyo750w02/anat/sub-tokyo750w02_space-other_T2w_softseg_bin.json new file mode 100644 index 0000000000..e41d6ca48c --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-tokyo750w02/anat/sub-tokyo750w02_space-other_T2w_softseg_bin.json @@ -0,0 +1,4 @@ +{ + "Author": "Sandrine Bedard", + "Date": "2022-10-22 14:36:49" +} \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-tokyo750w02/anat/sub-tokyo750w02_space-other_T2w_softseg_bin.nii.gz b/derivatives/labels_softseg_bin/sub-tokyo750w02/anat/sub-tokyo750w02_space-other_T2w_softseg_bin.nii.gz new file mode 100644 index 0000000000..6fda50924f --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-tokyo750w02/anat/sub-tokyo750w02_space-other_T2w_softseg_bin.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s33204--f0b93f4c0e1b13fe3a12bcc773f96cfeab1911e76e7d56b7eb9041f415f8c5f5.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-tokyo750w02/dwi/sub-tokyo750w02_rec-average_dwi_softseg_bin.json b/derivatives/labels_softseg_bin/sub-tokyo750w02/dwi/sub-tokyo750w02_rec-average_dwi_softseg_bin.json new file mode 100644 index 0000000000..e41d6ca48c --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-tokyo750w02/dwi/sub-tokyo750w02_rec-average_dwi_softseg_bin.json @@ -0,0 +1,4 @@ +{ + "Author": "Sandrine Bedard", + "Date": "2022-10-22 14:36:49" +} \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-tokyo750w02/dwi/sub-tokyo750w02_rec-average_dwi_softseg_bin.nii.gz b/derivatives/labels_softseg_bin/sub-tokyo750w02/dwi/sub-tokyo750w02_rec-average_dwi_softseg_bin.nii.gz new file mode 100644 index 0000000000..19a3e3931c --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-tokyo750w02/dwi/sub-tokyo750w02_rec-average_dwi_softseg_bin.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s1413--3a50ea136565e1914d564e9e6b6660fde1078a6aba6b4eadf6066ad244caaab1.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-tokyo750w03/anat/sub-tokyo750w03_flip-1_mt-on_space-other_MTS_softseg_bin.json b/derivatives/labels_softseg_bin/sub-tokyo750w03/anat/sub-tokyo750w03_flip-1_mt-on_space-other_MTS_softseg_bin.json new file mode 100644 index 0000000000..bf02a0dd72 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-tokyo750w03/anat/sub-tokyo750w03_flip-1_mt-on_space-other_MTS_softseg_bin.json @@ -0,0 +1,4 @@ +{ + "Author": "Sandrine Bedard", + "Date": "2022-10-22 14:36:50" +} \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-tokyo750w03/anat/sub-tokyo750w03_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz b/derivatives/labels_softseg_bin/sub-tokyo750w03/anat/sub-tokyo750w03_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz new file mode 100644 index 0000000000..10ffd8293d --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-tokyo750w03/anat/sub-tokyo750w03_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s5735--24404aa72758d8631f29dfff5685d9cd2c72e41610ee24e45ee06c68d1a8a6f3.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-tokyo750w03/anat/sub-tokyo750w03_flip-2_mt-off_space-other_MTS_softseg_bin.json b/derivatives/labels_softseg_bin/sub-tokyo750w03/anat/sub-tokyo750w03_flip-2_mt-off_space-other_MTS_softseg_bin.json new file mode 100644 index 0000000000..bf02a0dd72 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-tokyo750w03/anat/sub-tokyo750w03_flip-2_mt-off_space-other_MTS_softseg_bin.json @@ -0,0 +1,4 @@ +{ + "Author": "Sandrine Bedard", + "Date": "2022-10-22 14:36:50" +} \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-tokyo750w03/anat/sub-tokyo750w03_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz b/derivatives/labels_softseg_bin/sub-tokyo750w03/anat/sub-tokyo750w03_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz new file mode 100644 index 0000000000..ffff72a176 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-tokyo750w03/anat/sub-tokyo750w03_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s5801--b43f0764fbe5fbee62aa7bc91ddc5a3853d0c19dda97413f5fddb35d9de5fdc4.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-tokyo750w03/anat/sub-tokyo750w03_space-other_T1w_softseg_bin.json b/derivatives/labels_softseg_bin/sub-tokyo750w03/anat/sub-tokyo750w03_space-other_T1w_softseg_bin.json new file mode 100644 index 0000000000..bf02a0dd72 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-tokyo750w03/anat/sub-tokyo750w03_space-other_T1w_softseg_bin.json @@ -0,0 +1,4 @@ +{ + "Author": "Sandrine Bedard", + "Date": "2022-10-22 14:36:50" +} \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-tokyo750w03/anat/sub-tokyo750w03_space-other_T1w_softseg_bin.nii.gz b/derivatives/labels_softseg_bin/sub-tokyo750w03/anat/sub-tokyo750w03_space-other_T1w_softseg_bin.nii.gz new file mode 100644 index 0000000000..c6fa38a997 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-tokyo750w03/anat/sub-tokyo750w03_space-other_T1w_softseg_bin.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s89428--2063e9e3449ae3b5d881beee6e3c62f3995b54113f60b4b46227adc71bffcf57.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-tokyo750w03/anat/sub-tokyo750w03_space-other_T2star_softseg_bin.json b/derivatives/labels_softseg_bin/sub-tokyo750w03/anat/sub-tokyo750w03_space-other_T2star_softseg_bin.json new file mode 100644 index 0000000000..bf02a0dd72 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-tokyo750w03/anat/sub-tokyo750w03_space-other_T2star_softseg_bin.json @@ -0,0 +1,4 @@ +{ + "Author": "Sandrine Bedard", + "Date": "2022-10-22 14:36:50" +} \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-tokyo750w03/anat/sub-tokyo750w03_space-other_T2star_softseg_bin.nii.gz b/derivatives/labels_softseg_bin/sub-tokyo750w03/anat/sub-tokyo750w03_space-other_T2star_softseg_bin.nii.gz new file mode 100644 index 0000000000..0b0cced5f7 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-tokyo750w03/anat/sub-tokyo750w03_space-other_T2star_softseg_bin.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s23314--d07ea39a49a3d3abb473044052c269010c3a8f37862266ffd55af36bf1a40b29.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-tokyo750w03/anat/sub-tokyo750w03_space-other_T2w_softseg_bin.json b/derivatives/labels_softseg_bin/sub-tokyo750w03/anat/sub-tokyo750w03_space-other_T2w_softseg_bin.json new file mode 100644 index 0000000000..bf02a0dd72 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-tokyo750w03/anat/sub-tokyo750w03_space-other_T2w_softseg_bin.json @@ -0,0 +1,4 @@ +{ + "Author": "Sandrine Bedard", + "Date": "2022-10-22 14:36:50" +} \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-tokyo750w03/anat/sub-tokyo750w03_space-other_T2w_softseg_bin.nii.gz b/derivatives/labels_softseg_bin/sub-tokyo750w03/anat/sub-tokyo750w03_space-other_T2w_softseg_bin.nii.gz new file mode 100644 index 0000000000..221498f048 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-tokyo750w03/anat/sub-tokyo750w03_space-other_T2w_softseg_bin.nii.gz @@ -0,0 +1 @@ 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+1 @@ +/annex/objects/SHA256E-s1403--9244fd8ecaf84b025eebdd7eb2a7d3dd240b0b03b3312524994d1ecccda64fe2.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-tokyo750w04/anat/sub-tokyo750w04_flip-1_mt-on_space-other_MTS_softseg_bin.json b/derivatives/labels_softseg_bin/sub-tokyo750w04/anat/sub-tokyo750w04_flip-1_mt-on_space-other_MTS_softseg_bin.json new file mode 100644 index 0000000000..bf02a0dd72 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-tokyo750w04/anat/sub-tokyo750w04_flip-1_mt-on_space-other_MTS_softseg_bin.json @@ -0,0 +1,4 @@ +{ + "Author": "Sandrine Bedard", + "Date": "2022-10-22 14:36:50" +} \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-tokyo750w04/anat/sub-tokyo750w04_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz b/derivatives/labels_softseg_bin/sub-tokyo750w04/anat/sub-tokyo750w04_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz new file mode 100644 index 0000000000..bfaea12156 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-tokyo750w04/anat/sub-tokyo750w04_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s5664--280d5fc8c4884e5e1615042c50b80d75888567058388d9b9872c558ac48b4a57.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-tokyo750w04/anat/sub-tokyo750w04_flip-2_mt-off_space-other_MTS_softseg_bin.json b/derivatives/labels_softseg_bin/sub-tokyo750w04/anat/sub-tokyo750w04_flip-2_mt-off_space-other_MTS_softseg_bin.json new file mode 100644 index 0000000000..bf02a0dd72 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-tokyo750w04/anat/sub-tokyo750w04_flip-2_mt-off_space-other_MTS_softseg_bin.json @@ -0,0 +1,4 @@ +{ + "Author": "Sandrine Bedard", + "Date": "2022-10-22 14:36:50" +} \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-tokyo750w04/anat/sub-tokyo750w04_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz 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a/derivatives/labels_softseg_bin/sub-tokyo750w04/anat/sub-tokyo750w04_space-other_T1w_softseg_bin.nii.gz b/derivatives/labels_softseg_bin/sub-tokyo750w04/anat/sub-tokyo750w04_space-other_T1w_softseg_bin.nii.gz new file mode 100644 index 0000000000..f01bbda6e9 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-tokyo750w04/anat/sub-tokyo750w04_space-other_T1w_softseg_bin.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s88811--eeebecdb272dc1c4da6f56bdf8429a65df3aa2a1bedc10aabb1c5bd104527589.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-tokyo750w04/anat/sub-tokyo750w04_space-other_T2star_softseg_bin.json b/derivatives/labels_softseg_bin/sub-tokyo750w04/anat/sub-tokyo750w04_space-other_T2star_softseg_bin.json new file mode 100644 index 0000000000..bf02a0dd72 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-tokyo750w04/anat/sub-tokyo750w04_space-other_T2star_softseg_bin.json @@ -0,0 +1,4 @@ +{ + "Author": "Sandrine Bedard", + "Date": "2022-10-22 14:36:50" +} \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-tokyo750w04/anat/sub-tokyo750w04_space-other_T2star_softseg_bin.nii.gz b/derivatives/labels_softseg_bin/sub-tokyo750w04/anat/sub-tokyo750w04_space-other_T2star_softseg_bin.nii.gz new file mode 100644 index 0000000000..db703f6f08 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-tokyo750w04/anat/sub-tokyo750w04_space-other_T2star_softseg_bin.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s23249--98cf76929de79b2b94b7620901144f6e1d22b21c28e8db4aa4c7d6e3895ce865.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-tokyo750w04/anat/sub-tokyo750w04_space-other_T2w_softseg_bin.json b/derivatives/labels_softseg_bin/sub-tokyo750w04/anat/sub-tokyo750w04_space-other_T2w_softseg_bin.json new file mode 100644 index 0000000000..bf02a0dd72 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-tokyo750w04/anat/sub-tokyo750w04_space-other_T2w_softseg_bin.json @@ -0,0 +1,4 @@ +{ + "Author": "Sandrine Bedard", + "Date": "2022-10-22 14:36:50" +} \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-tokyo750w04/anat/sub-tokyo750w04_space-other_T2w_softseg_bin.nii.gz b/derivatives/labels_softseg_bin/sub-tokyo750w04/anat/sub-tokyo750w04_space-other_T2w_softseg_bin.nii.gz new file mode 100644 index 0000000000..4810c5beb2 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-tokyo750w04/anat/sub-tokyo750w04_space-other_T2w_softseg_bin.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s32672--e8f175594ec8d5e9ae610487e4304b90c63d33930ba224a9df8c3865b6260bee.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-tokyo750w04/dwi/sub-tokyo750w04_rec-average_dwi_softseg_bin.json b/derivatives/labels_softseg_bin/sub-tokyo750w04/dwi/sub-tokyo750w04_rec-average_dwi_softseg_bin.json new file mode 100644 index 0000000000..bf02a0dd72 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-tokyo750w04/dwi/sub-tokyo750w04_rec-average_dwi_softseg_bin.json @@ -0,0 +1,4 @@ +{ + "Author": "Sandrine Bedard", + "Date": "2022-10-22 14:36:50" +} \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-tokyo750w04/dwi/sub-tokyo750w04_rec-average_dwi_softseg_bin.nii.gz b/derivatives/labels_softseg_bin/sub-tokyo750w04/dwi/sub-tokyo750w04_rec-average_dwi_softseg_bin.nii.gz new file mode 100644 index 0000000000..fc91a6424d --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-tokyo750w04/dwi/sub-tokyo750w04_rec-average_dwi_softseg_bin.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s1381--1d52b7efb60515f2c730d4eda2da91938566fbf2654ca663028370ce4296248b.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-tokyo750w05/anat/sub-tokyo750w05_flip-1_mt-on_space-other_MTS_softseg_bin.json b/derivatives/labels_softseg_bin/sub-tokyo750w05/anat/sub-tokyo750w05_flip-1_mt-on_space-other_MTS_softseg_bin.json new file mode 100644 index 0000000000..bf02a0dd72 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-tokyo750w05/anat/sub-tokyo750w05_flip-1_mt-on_space-other_MTS_softseg_bin.json @@ -0,0 +1,4 @@ +{ + "Author": "Sandrine Bedard", + "Date": "2022-10-22 14:36:50" +} \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-tokyo750w05/anat/sub-tokyo750w05_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz b/derivatives/labels_softseg_bin/sub-tokyo750w05/anat/sub-tokyo750w05_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz new file mode 100644 index 0000000000..c757253a99 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-tokyo750w05/anat/sub-tokyo750w05_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s5695--1a991530c150a27653313f76f71cb0c6baa50d0d701f9b1527845fa785bf2d21.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-tokyo750w05/anat/sub-tokyo750w05_flip-2_mt-off_space-other_MTS_softseg_bin.json b/derivatives/labels_softseg_bin/sub-tokyo750w05/anat/sub-tokyo750w05_flip-2_mt-off_space-other_MTS_softseg_bin.json new file mode 100644 index 0000000000..bf02a0dd72 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-tokyo750w05/anat/sub-tokyo750w05_flip-2_mt-off_space-other_MTS_softseg_bin.json @@ -0,0 +1,4 @@ +{ + "Author": "Sandrine Bedard", + "Date": "2022-10-22 14:36:50" +} \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-tokyo750w05/anat/sub-tokyo750w05_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz b/derivatives/labels_softseg_bin/sub-tokyo750w05/anat/sub-tokyo750w05_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz new file mode 100644 index 0000000000..fb2b9f4e95 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-tokyo750w05/anat/sub-tokyo750w05_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s5631--84e8fa79e4b05788eb3d901b53f6144c42077f6893e320f2c3cf70a3574ee1d4.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-tokyo750w05/anat/sub-tokyo750w05_space-other_T1w_softseg_bin.json b/derivatives/labels_softseg_bin/sub-tokyo750w05/anat/sub-tokyo750w05_space-other_T1w_softseg_bin.json new file mode 100644 index 0000000000..bf02a0dd72 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-tokyo750w05/anat/sub-tokyo750w05_space-other_T1w_softseg_bin.json @@ -0,0 +1,4 @@ +{ + "Author": "Sandrine Bedard", + "Date": "2022-10-22 14:36:50" +} \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-tokyo750w05/anat/sub-tokyo750w05_space-other_T1w_softseg_bin.nii.gz b/derivatives/labels_softseg_bin/sub-tokyo750w05/anat/sub-tokyo750w05_space-other_T1w_softseg_bin.nii.gz new file mode 100644 index 0000000000..a44b0acfad --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-tokyo750w05/anat/sub-tokyo750w05_space-other_T1w_softseg_bin.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s88872--1bc380c9bf358ff2a6d5455e8e12dfd9d1f9ddf116bf8733ae0d627804cdc972.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-tokyo750w05/anat/sub-tokyo750w05_space-other_T2star_softseg_bin.json b/derivatives/labels_softseg_bin/sub-tokyo750w05/anat/sub-tokyo750w05_space-other_T2star_softseg_bin.json new file mode 100644 index 0000000000..bf02a0dd72 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-tokyo750w05/anat/sub-tokyo750w05_space-other_T2star_softseg_bin.json @@ -0,0 +1,4 @@ +{ + "Author": "Sandrine Bedard", + "Date": "2022-10-22 14:36:50" +} \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-tokyo750w05/anat/sub-tokyo750w05_space-other_T2star_softseg_bin.nii.gz b/derivatives/labels_softseg_bin/sub-tokyo750w05/anat/sub-tokyo750w05_space-other_T2star_softseg_bin.nii.gz new file mode 100644 index 0000000000..79756f36a6 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-tokyo750w05/anat/sub-tokyo750w05_space-other_T2star_softseg_bin.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s23199--d4c779797741101c4701d3c59e7538264d1afe733c24cc16029732e9688ff287.nii.gz diff --git 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+1 @@ +/annex/objects/SHA256E-s1377--86effb7d372a64130afcfad49c618e9760173f77e53a0ef62ee10b364eda5963.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-tokyo750w06/anat/sub-tokyo750w06_flip-1_mt-on_space-other_MTS_softseg_bin.json b/derivatives/labels_softseg_bin/sub-tokyo750w06/anat/sub-tokyo750w06_flip-1_mt-on_space-other_MTS_softseg_bin.json new file mode 100644 index 0000000000..bf02a0dd72 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-tokyo750w06/anat/sub-tokyo750w06_flip-1_mt-on_space-other_MTS_softseg_bin.json @@ -0,0 +1,4 @@ +{ + "Author": "Sandrine Bedard", + "Date": "2022-10-22 14:36:50" +} \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-tokyo750w06/anat/sub-tokyo750w06_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz b/derivatives/labels_softseg_bin/sub-tokyo750w06/anat/sub-tokyo750w06_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz new file mode 100644 index 0000000000..721b347222 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-tokyo750w06/anat/sub-tokyo750w06_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s5758--9bc71d1047d565055bec54529ca0b3c06f701655341fc7c25df91fccf6f91361.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-tokyo750w06/anat/sub-tokyo750w06_flip-2_mt-off_space-other_MTS_softseg_bin.json b/derivatives/labels_softseg_bin/sub-tokyo750w06/anat/sub-tokyo750w06_flip-2_mt-off_space-other_MTS_softseg_bin.json new file mode 100644 index 0000000000..bf02a0dd72 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-tokyo750w06/anat/sub-tokyo750w06_flip-2_mt-off_space-other_MTS_softseg_bin.json @@ -0,0 +1,4 @@ +{ + "Author": "Sandrine Bedard", + "Date": "2022-10-22 14:36:50" +} \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-tokyo750w06/anat/sub-tokyo750w06_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz b/derivatives/labels_softseg_bin/sub-tokyo750w06/anat/sub-tokyo750w06_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz new file mode 100644 index 0000000000..0ae28cf6f2 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-tokyo750w06/anat/sub-tokyo750w06_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s5645--9594e71c42157f9fa33ce9c9e9fc50d18b39b4fa548b5fc7f4846bb69f4903bf.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-tokyo750w06/anat/sub-tokyo750w06_space-other_T1w_softseg_bin.json b/derivatives/labels_softseg_bin/sub-tokyo750w06/anat/sub-tokyo750w06_space-other_T1w_softseg_bin.json new file mode 100644 index 0000000000..bf02a0dd72 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-tokyo750w06/anat/sub-tokyo750w06_space-other_T1w_softseg_bin.json @@ -0,0 +1,4 @@ +{ + "Author": "Sandrine Bedard", + "Date": "2022-10-22 14:36:50" +} \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-tokyo750w06/anat/sub-tokyo750w06_space-other_T1w_softseg_bin.nii.gz b/derivatives/labels_softseg_bin/sub-tokyo750w06/anat/sub-tokyo750w06_space-other_T1w_softseg_bin.nii.gz new file mode 100644 index 0000000000..db752a1b99 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-tokyo750w06/anat/sub-tokyo750w06_space-other_T1w_softseg_bin.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s88888--785b5de1dad735e25c6731fe71eb36ef1aa7e29ef8d203273aeebd0e1d51bcbf.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-tokyo750w06/anat/sub-tokyo750w06_space-other_T2star_softseg_bin.json b/derivatives/labels_softseg_bin/sub-tokyo750w06/anat/sub-tokyo750w06_space-other_T2star_softseg_bin.json new file mode 100644 index 0000000000..bf02a0dd72 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-tokyo750w06/anat/sub-tokyo750w06_space-other_T2star_softseg_bin.json @@ -0,0 +1,4 @@ +{ + "Author": "Sandrine Bedard", + "Date": "2022-10-22 14:36:50" +} \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-tokyo750w06/anat/sub-tokyo750w06_space-other_T2star_softseg_bin.nii.gz b/derivatives/labels_softseg_bin/sub-tokyo750w06/anat/sub-tokyo750w06_space-other_T2star_softseg_bin.nii.gz new file mode 100644 index 0000000000..62846f494b --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-tokyo750w06/anat/sub-tokyo750w06_space-other_T2star_softseg_bin.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s23325--62ebf488782c9afe05b72929b2eea72953eeff82bde20d16a759f095a6ac5302.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-tokyo750w06/anat/sub-tokyo750w06_space-other_T2w_softseg_bin.json b/derivatives/labels_softseg_bin/sub-tokyo750w06/anat/sub-tokyo750w06_space-other_T2w_softseg_bin.json new file mode 100644 index 0000000000..bf02a0dd72 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-tokyo750w06/anat/sub-tokyo750w06_space-other_T2w_softseg_bin.json @@ -0,0 +1,4 @@ +{ + "Author": "Sandrine Bedard", + "Date": "2022-10-22 14:36:50" +} \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-tokyo750w06/anat/sub-tokyo750w06_space-other_T2w_softseg_bin.nii.gz b/derivatives/labels_softseg_bin/sub-tokyo750w06/anat/sub-tokyo750w06_space-other_T2w_softseg_bin.nii.gz new file mode 100644 index 0000000000..9492801c64 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-tokyo750w06/anat/sub-tokyo750w06_space-other_T2w_softseg_bin.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s32881--205460a20c5462a1f7e85ac11b2f414a1fd6db50ed8a91fdc974fe6067cb0de9.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-tokyo750w06/dwi/sub-tokyo750w06_rec-average_dwi_softseg_bin.json b/derivatives/labels_softseg_bin/sub-tokyo750w06/dwi/sub-tokyo750w06_rec-average_dwi_softseg_bin.json new file mode 100644 index 0000000000..e6b3b129d6 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-tokyo750w06/dwi/sub-tokyo750w06_rec-average_dwi_softseg_bin.json @@ -0,0 +1,4 @@ +{ + "Author": "Sandrine Bedard", + "Date": "2022-10-22 14:36:51" +} \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-tokyo750w06/dwi/sub-tokyo750w06_rec-average_dwi_softseg_bin.nii.gz b/derivatives/labels_softseg_bin/sub-tokyo750w06/dwi/sub-tokyo750w06_rec-average_dwi_softseg_bin.nii.gz new file mode 100644 index 0000000000..b2ef90e674 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-tokyo750w06/dwi/sub-tokyo750w06_rec-average_dwi_softseg_bin.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s1352--e81b26d5a92669e9f6a244ea44b270a40b7dd4535780d6fbc6739d7a00072f2d.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-tokyo750w07/anat/sub-tokyo750w07_flip-1_mt-on_space-other_MTS_softseg_bin.json b/derivatives/labels_softseg_bin/sub-tokyo750w07/anat/sub-tokyo750w07_flip-1_mt-on_space-other_MTS_softseg_bin.json new file mode 100644 index 0000000000..e6b3b129d6 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-tokyo750w07/anat/sub-tokyo750w07_flip-1_mt-on_space-other_MTS_softseg_bin.json @@ -0,0 +1,4 @@ +{ + "Author": "Sandrine Bedard", + "Date": "2022-10-22 14:36:51" +} \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-tokyo750w07/anat/sub-tokyo750w07_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz b/derivatives/labels_softseg_bin/sub-tokyo750w07/anat/sub-tokyo750w07_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz new file mode 100644 index 0000000000..bea6e7bd24 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-tokyo750w07/anat/sub-tokyo750w07_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s5759--019ba053084ecf2e4176fdf01e84a14200bc268bb96d4b7b6338f4e27ef88e9e.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-tokyo750w07/anat/sub-tokyo750w07_flip-2_mt-off_space-other_MTS_softseg_bin.json b/derivatives/labels_softseg_bin/sub-tokyo750w07/anat/sub-tokyo750w07_flip-2_mt-off_space-other_MTS_softseg_bin.json new file mode 100644 index 0000000000..e6b3b129d6 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-tokyo750w07/anat/sub-tokyo750w07_flip-2_mt-off_space-other_MTS_softseg_bin.json @@ -0,0 +1,4 @@ +{ + "Author": "Sandrine Bedard", + "Date": "2022-10-22 14:36:51" +} \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-tokyo750w07/anat/sub-tokyo750w07_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz b/derivatives/labels_softseg_bin/sub-tokyo750w07/anat/sub-tokyo750w07_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz new file mode 100644 index 0000000000..7e9bf5c08c --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-tokyo750w07/anat/sub-tokyo750w07_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s5554--94e652e1322753f60ecd9d7ca355d5da552bd2823472125939378522c57fc550.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-tokyo750w07/anat/sub-tokyo750w07_space-other_T1w_softseg_bin.json b/derivatives/labels_softseg_bin/sub-tokyo750w07/anat/sub-tokyo750w07_space-other_T1w_softseg_bin.json new file mode 100644 index 0000000000..e6b3b129d6 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-tokyo750w07/anat/sub-tokyo750w07_space-other_T1w_softseg_bin.json @@ -0,0 +1,4 @@ +{ + "Author": "Sandrine Bedard", + "Date": "2022-10-22 14:36:51" +} \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-tokyo750w07/anat/sub-tokyo750w07_space-other_T1w_softseg_bin.nii.gz b/derivatives/labels_softseg_bin/sub-tokyo750w07/anat/sub-tokyo750w07_space-other_T1w_softseg_bin.nii.gz new file mode 100644 index 0000000000..980eedf4ff --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-tokyo750w07/anat/sub-tokyo750w07_space-other_T1w_softseg_bin.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s89199--3223a8c4f6706f951219de05dfa7640797f80c0a8b36abdb76f92ede8c0e9713.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-tokyo750w07/anat/sub-tokyo750w07_space-other_T2star_softseg_bin.json 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b/derivatives/labels_softseg_bin/sub-tokyoIngenia01/dwi/sub-tokyoIngenia01_rec-average_dwi_softseg_bin.json @@ -0,0 +1,4 @@ +{ + "Author": "Sandrine Bedard", + "Date": "2022-10-22 14:36:51" +} \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-tokyoIngenia01/dwi/sub-tokyoIngenia01_rec-average_dwi_softseg_bin.nii.gz b/derivatives/labels_softseg_bin/sub-tokyoIngenia01/dwi/sub-tokyoIngenia01_rec-average_dwi_softseg_bin.nii.gz new file mode 100644 index 0000000000..4424b10123 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-tokyoIngenia01/dwi/sub-tokyoIngenia01_rec-average_dwi_softseg_bin.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s1061--e4b8943c4aba2e56ce7436b6f50617021f35904d9b701a8f3e274bae91908a86.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-tokyoIngenia02/anat/sub-tokyoIngenia02_flip-1_mt-on_space-other_MTS_softseg_bin.json 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14:36:51" +} \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-tokyoIngenia02/dwi/sub-tokyoIngenia02_rec-average_dwi_softseg_bin.nii.gz b/derivatives/labels_softseg_bin/sub-tokyoIngenia02/dwi/sub-tokyoIngenia02_rec-average_dwi_softseg_bin.nii.gz new file mode 100644 index 0000000000..3f74b83315 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-tokyoIngenia02/dwi/sub-tokyoIngenia02_rec-average_dwi_softseg_bin.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s1006--163ddf0b06f10d23ee4946696c420fc752d523515a478ed599a494580e90ba16.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-tokyoIngenia03/anat/sub-tokyoIngenia03_flip-1_mt-on_space-other_MTS_softseg_bin.json b/derivatives/labels_softseg_bin/sub-tokyoIngenia03/anat/sub-tokyoIngenia03_flip-1_mt-on_space-other_MTS_softseg_bin.json new file mode 100644 index 0000000000..e6b3b129d6 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-tokyoIngenia03/anat/sub-tokyoIngenia03_flip-1_mt-on_space-other_MTS_softseg_bin.json @@ -0,0 +1,4 @@ +{ + "Author": "Sandrine Bedard", + "Date": "2022-10-22 14:36:51" +} \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-tokyoIngenia03/anat/sub-tokyoIngenia03_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz b/derivatives/labels_softseg_bin/sub-tokyoIngenia03/anat/sub-tokyoIngenia03_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz new file mode 100644 index 0000000000..53a7d7d75a --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-tokyoIngenia03/anat/sub-tokyoIngenia03_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s7383--7be2195caf9c1685551c113857e42e0df8a2a7aefb5643dc76e8c31175fecb58.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-tokyoIngenia03/anat/sub-tokyoIngenia03_flip-2_mt-off_space-other_MTS_softseg_bin.json 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100644 index 0000000000..5124d44ee7 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-tokyoIngenia03/anat/sub-tokyoIngenia03_space-other_T2w_softseg_bin.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s36405--08b77d00e7a515761ac10a7f6e8e3300deda74e1a29eae26e3f47357b25ea223.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-tokyoIngenia03/dwi/sub-tokyoIngenia03_rec-average_dwi_softseg_bin.json b/derivatives/labels_softseg_bin/sub-tokyoIngenia03/dwi/sub-tokyoIngenia03_rec-average_dwi_softseg_bin.json new file mode 100644 index 0000000000..dedf7bd0ad --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-tokyoIngenia03/dwi/sub-tokyoIngenia03_rec-average_dwi_softseg_bin.json @@ -0,0 +1,4 @@ +{ + "Author": "Sandrine Bedard", + "Date": "2022-10-22 14:36:52" +} \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-tokyoIngenia03/dwi/sub-tokyoIngenia03_rec-average_dwi_softseg_bin.nii.gz 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b/derivatives/labels_softseg_bin/sub-tokyoSkyra04/anat/sub-tokyoSkyra04_space-other_T2w_softseg_bin.json @@ -0,0 +1,4 @@ +{ + "Author": "Sandrine Bedard", + "Date": "2022-10-22 14:36:53" +} \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-tokyoSkyra04/anat/sub-tokyoSkyra04_space-other_T2w_softseg_bin.nii.gz b/derivatives/labels_softseg_bin/sub-tokyoSkyra04/anat/sub-tokyoSkyra04_space-other_T2w_softseg_bin.nii.gz new file mode 100644 index 0000000000..c52ff8212b --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-tokyoSkyra04/anat/sub-tokyoSkyra04_space-other_T2w_softseg_bin.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s36566--11540eb9fc0357094327d03b012dce8247baef50c4eb6da18b35919ef4ce7215.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-tokyoSkyra04/dwi/sub-tokyoSkyra04_rec-average_dwi_softseg_bin.json b/derivatives/labels_softseg_bin/sub-tokyoSkyra04/dwi/sub-tokyoSkyra04_rec-average_dwi_softseg_bin.json new file mode 100644 index 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b/derivatives/labels_softseg_bin/sub-tokyoSkyra07/anat/sub-tokyoSkyra07_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s7348--3e2aed22de24b5520ecc28bf1019758dece1758c12a32d88d8a99862e6d4950a.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-tokyoSkyra07/anat/sub-tokyoSkyra07_flip-2_mt-off_space-other_MTS_softseg_bin.json b/derivatives/labels_softseg_bin/sub-tokyoSkyra07/anat/sub-tokyoSkyra07_flip-2_mt-off_space-other_MTS_softseg_bin.json new file mode 100644 index 0000000000..66beabb179 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-tokyoSkyra07/anat/sub-tokyoSkyra07_flip-2_mt-off_space-other_MTS_softseg_bin.json @@ -0,0 +1,4 @@ +{ + "Author": "Sandrine Bedard", + "Date": "2022-10-22 14:36:54" +} \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-tokyoSkyra07/anat/sub-tokyoSkyra07_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz 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a/derivatives/labels_softseg_bin/sub-tokyoSkyra07/anat/sub-tokyoSkyra07_space-other_T1w_softseg_bin.nii.gz b/derivatives/labels_softseg_bin/sub-tokyoSkyra07/anat/sub-tokyoSkyra07_space-other_T1w_softseg_bin.nii.gz new file mode 100644 index 0000000000..d4d756bc48 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-tokyoSkyra07/anat/sub-tokyoSkyra07_space-other_T1w_softseg_bin.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s74947--7f7dd8c4dac2ec14ec3d30c4810f2fc9908ebf6c42d7bce7ea0ed94e33b03fe7.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-tokyoSkyra07/anat/sub-tokyoSkyra07_space-other_T2star_softseg_bin.json b/derivatives/labels_softseg_bin/sub-tokyoSkyra07/anat/sub-tokyoSkyra07_space-other_T2star_softseg_bin.json new file mode 100644 index 0000000000..66beabb179 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-tokyoSkyra07/anat/sub-tokyoSkyra07_space-other_T2star_softseg_bin.json @@ -0,0 +1,4 @@ +{ + "Author": "Sandrine Bedard", + "Date": "2022-10-22 14:36:54" +} \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-tokyoSkyra07/anat/sub-tokyoSkyra07_space-other_T2star_softseg_bin.nii.gz b/derivatives/labels_softseg_bin/sub-tokyoSkyra07/anat/sub-tokyoSkyra07_space-other_T2star_softseg_bin.nii.gz new file mode 100644 index 0000000000..9699c242d3 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-tokyoSkyra07/anat/sub-tokyoSkyra07_space-other_T2star_softseg_bin.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s14737--a00efb54e28e179a6a16bbaf9c4752847afd29be32162d116166dbea61275417.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-tokyoSkyra07/anat/sub-tokyoSkyra07_space-other_T2w_softseg_bin.json b/derivatives/labels_softseg_bin/sub-tokyoSkyra07/anat/sub-tokyoSkyra07_space-other_T2w_softseg_bin.json new file mode 100644 index 0000000000..66beabb179 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-tokyoSkyra07/anat/sub-tokyoSkyra07_space-other_T2w_softseg_bin.json @@ -0,0 +1,4 @@ +{ + "Author": "Sandrine Bedard", + "Date": "2022-10-22 14:36:54" +} \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-tokyoSkyra07/anat/sub-tokyoSkyra07_space-other_T2w_softseg_bin.nii.gz b/derivatives/labels_softseg_bin/sub-tokyoSkyra07/anat/sub-tokyoSkyra07_space-other_T2w_softseg_bin.nii.gz new file mode 100644 index 0000000000..ca736451ec --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-tokyoSkyra07/anat/sub-tokyoSkyra07_space-other_T2w_softseg_bin.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s36916--0037d357ee0d4f7173e33a74d7099be660d5698c5e4b3e6089f5f57de5c7a122.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-tokyoSkyra07/dwi/sub-tokyoSkyra07_rec-average_dwi_softseg_bin.json b/derivatives/labels_softseg_bin/sub-tokyoSkyra07/dwi/sub-tokyoSkyra07_rec-average_dwi_softseg_bin.json new file mode 100644 index 0000000000..66beabb179 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-tokyoSkyra07/dwi/sub-tokyoSkyra07_rec-average_dwi_softseg_bin.json @@ -0,0 +1,4 @@ +{ + "Author": "Sandrine Bedard", + "Date": "2022-10-22 14:36:54" +} \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-tokyoSkyra07/dwi/sub-tokyoSkyra07_rec-average_dwi_softseg_bin.nii.gz b/derivatives/labels_softseg_bin/sub-tokyoSkyra07/dwi/sub-tokyoSkyra07_rec-average_dwi_softseg_bin.nii.gz new file mode 100644 index 0000000000..664c6c8424 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-tokyoSkyra07/dwi/sub-tokyoSkyra07_rec-average_dwi_softseg_bin.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s1026--fbd24bedf237b3c758665676d8aa4dcd05fa6b5bd0e3d41399e2201c47afd6bf.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-ubc02/anat/sub-ubc02_flip-1_mt-on_space-other_MTS_softseg_bin.json b/derivatives/labels_softseg_bin/sub-ubc02/anat/sub-ubc02_flip-1_mt-on_space-other_MTS_softseg_bin.json new file mode 100644 index 0000000000..66beabb179 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-ubc02/anat/sub-ubc02_flip-1_mt-on_space-other_MTS_softseg_bin.json @@ -0,0 +1,4 @@ +{ + "Author": "Sandrine Bedard", + "Date": "2022-10-22 14:36:54" +} \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-ubc02/anat/sub-ubc02_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz b/derivatives/labels_softseg_bin/sub-ubc02/anat/sub-ubc02_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz new file mode 100644 index 0000000000..1df3c05d44 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-ubc02/anat/sub-ubc02_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s7388--fbbd9f4fecd962171b533cd047e7a1ef19dccdc88ab4bd1ad11c9c24569b44b3.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-ubc02/anat/sub-ubc02_flip-2_mt-off_space-other_MTS_softseg_bin.json b/derivatives/labels_softseg_bin/sub-ubc02/anat/sub-ubc02_flip-2_mt-off_space-other_MTS_softseg_bin.json new file mode 100644 index 0000000000..66beabb179 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-ubc02/anat/sub-ubc02_flip-2_mt-off_space-other_MTS_softseg_bin.json @@ -0,0 +1,4 @@ +{ + "Author": "Sandrine Bedard", + "Date": "2022-10-22 14:36:54" +} \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-ubc02/anat/sub-ubc02_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz b/derivatives/labels_softseg_bin/sub-ubc02/anat/sub-ubc02_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz new file mode 100644 index 0000000000..d0b282c843 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-ubc02/anat/sub-ubc02_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s7243--d4d5b6ce72fa29a82214cdef28edb5441062f7d365d2256d8b8509d8b1135896.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-ubc02/anat/sub-ubc02_space-other_T1w_softseg_bin.json b/derivatives/labels_softseg_bin/sub-ubc02/anat/sub-ubc02_space-other_T1w_softseg_bin.json new file mode 100644 index 0000000000..66beabb179 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-ubc02/anat/sub-ubc02_space-other_T1w_softseg_bin.json @@ -0,0 +1,4 @@ +{ + "Author": "Sandrine Bedard", + "Date": "2022-10-22 14:36:54" +} \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-ubc02/anat/sub-ubc02_space-other_T1w_softseg_bin.nii.gz b/derivatives/labels_softseg_bin/sub-ubc02/anat/sub-ubc02_space-other_T1w_softseg_bin.nii.gz new file mode 100644 index 0000000000..0e099a6e5e --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-ubc02/anat/sub-ubc02_space-other_T1w_softseg_bin.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s91865--2cb9bc99bb5b5a2618aaaae3073e8e7e2f9a8049c624e5552c5ff38ed706dfff.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-ubc02/anat/sub-ubc02_space-other_T2star_softseg_bin.json b/derivatives/labels_softseg_bin/sub-ubc02/anat/sub-ubc02_space-other_T2star_softseg_bin.json new file mode 100644 index 0000000000..19c3fc2686 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-ubc02/anat/sub-ubc02_space-other_T2star_softseg_bin.json @@ -0,0 +1,4 @@ +{ + "Author": "Sandrine Bedard", + "Date": "2022-10-22 14:36:55" +} \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-ubc02/anat/sub-ubc02_space-other_T2star_softseg_bin.nii.gz b/derivatives/labels_softseg_bin/sub-ubc02/anat/sub-ubc02_space-other_T2star_softseg_bin.nii.gz new file mode 100644 index 0000000000..820156af08 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-ubc02/anat/sub-ubc02_space-other_T2star_softseg_bin.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s14688--ec70ab41936033d2e9c657ef49b00928a9062777dee8f440a7f8e65a97988b01.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-ubc02/anat/sub-ubc02_space-other_T2w_softseg_bin.json b/derivatives/labels_softseg_bin/sub-ubc02/anat/sub-ubc02_space-other_T2w_softseg_bin.json new file mode 100644 index 0000000000..19c3fc2686 --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-ubc02/anat/sub-ubc02_space-other_T2w_softseg_bin.json @@ -0,0 +1,4 @@ +{ + "Author": "Sandrine Bedard", + "Date": "2022-10-22 14:36:55" +} \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-ubc02/anat/sub-ubc02_space-other_T2w_softseg_bin.nii.gz b/derivatives/labels_softseg_bin/sub-ubc02/anat/sub-ubc02_space-other_T2w_softseg_bin.nii.gz new file mode 100644 index 0000000000..ce7947589a --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-ubc02/anat/sub-ubc02_space-other_T2w_softseg_bin.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s36658--f56fe99c391c546c2ccfca63c4624e3f0bb842e24f08be01a35339a44ba71549.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-ubc02/dwi/sub-ubc02_rec-average_dwi_softseg_bin.json b/derivatives/labels_softseg_bin/sub-ubc02/dwi/sub-ubc02_rec-average_dwi_softseg_bin.json new file mode 100644 index 0000000000..19c3fc2686 --- /dev/null +++ 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b/derivatives/labels_softseg_bin/sub-ucl03/anat/sub-ucl03_flip-1_mt-on_space-other_MTS_softseg_bin.json @@ -0,0 +1,4 @@ +{ + "Author": "Sandrine Bedard", + "Date": "2022-10-22 14:36:58" +} \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-ucl03/anat/sub-ucl03_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz b/derivatives/labels_softseg_bin/sub-ucl03/anat/sub-ucl03_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz new file mode 100644 index 0000000000..ddecafcb2f --- /dev/null +++ b/derivatives/labels_softseg_bin/sub-ucl03/anat/sub-ucl03_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s7387--a5e8dbc008f3cdda6faa6a360142b6013370f94361e4b597d6a31def65a6f7af.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-ucl03/anat/sub-ucl03_flip-2_mt-off_space-other_MTS_softseg_bin.json b/derivatives/labels_softseg_bin/sub-ucl03/anat/sub-ucl03_flip-2_mt-off_space-other_MTS_softseg_bin.json new file mode 100644 index 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...sub-beijingPrisma03_space-other_T2w_labels-disc-manual.nii.gz} | 0 ...l.json => sub-beijingPrisma03_space-other_T2w_seg-manual.json} | 0 ...i.gz => sub-beijingPrisma03_space-other_T2w_seg-manual.nii.gz} | 0 ...-beijingPrisma04_flip-1_mt-on_space-other_MTS_seg-manual.json} | 0 ...eijingPrisma04_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} | 0 ...beijingPrisma04_flip-2_mt-off_space-other_MTS_seg-manual.json} | 0 ...ijingPrisma04_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} | 0 ...> sub-beijingPrisma04_space-other_T1w_labels-disc-manual.json} | 0 ...sub-beijingPrisma04_space-other_T1w_labels-disc-manual.nii.gz} | 0 ...l.json => sub-beijingPrisma04_space-other_T1w_seg-manual.json} | 0 ...i.gz => sub-beijingPrisma04_space-other_T1w_seg-manual.nii.gz} | 0 ...son => sub-beijingPrisma04_space-other_T2star_seg-manual.json} | 0 ...z => sub-beijingPrisma04_space-other_T2star_seg-manual.nii.gz} | 0 ...> sub-beijingPrisma04_space-other_T2w_labels-disc-manual.json} | 0 ...sub-beijingPrisma04_space-other_T2w_labels-disc-manual.nii.gz} | 0 ...l.json => sub-beijingPrisma04_space-other_T2w_seg-manual.json} | 0 ...i.gz => sub-beijingPrisma04_space-other_T2w_seg-manual.nii.gz} | 0 ...-beijingPrisma05_flip-1_mt-on_space-other_MTS_seg-manual.json} | 0 ...eijingPrisma05_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} | 0 ...beijingPrisma05_flip-2_mt-off_space-other_MTS_seg-manual.json} | 0 ...ijingPrisma05_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} | 0 ...> sub-beijingPrisma05_space-other_T1w_labels-disc-manual.json} | 0 ...sub-beijingPrisma05_space-other_T1w_labels-disc-manual.nii.gz} | 0 ...l.json => sub-beijingPrisma05_space-other_T1w_seg-manual.json} | 0 ...i.gz => sub-beijingPrisma05_space-other_T1w_seg-manual.nii.gz} | 0 ...son => sub-beijingPrisma05_space-other_T2star_seg-manual.json} | 0 ...z => sub-beijingPrisma05_space-other_T2star_seg-manual.nii.gz} | 0 ...> sub-beijingPrisma05_space-other_T2w_labels-disc-manual.json} | 0 ...sub-beijingPrisma05_space-other_T2w_labels-disc-manual.nii.gz} | 0 ...l.json => sub-beijingPrisma05_space-other_T2w_seg-manual.json} | 0 ...i.gz => sub-beijingPrisma05_space-other_T2w_seg-manual.nii.gz} | 0 ...=> sub-beijingVerio01_space-other_T1w_labels-disc-manual.json} | 0 ... sub-beijingVerio01_space-other_T1w_labels-disc-manual.nii.gz} | 0 ...al.json => sub-beijingVerio01_space-other_T1w_seg-manual.json} | 0 ...ii.gz => sub-beijingVerio01_space-other_T1w_seg-manual.nii.gz} | 0 ...json => sub-beijingVerio01_space-other_T2star_seg-manual.json} | 0 ...gz => sub-beijingVerio01_space-other_T2star_seg-manual.nii.gz} | 0 ...=> sub-beijingVerio01_space-other_T2w_labels-disc-manual.json} | 0 ... sub-beijingVerio01_space-other_T2w_labels-disc-manual.nii.gz} | 0 ...al.json => sub-beijingVerio01_space-other_T2w_seg-manual.json} | 0 ...ii.gz => sub-beijingVerio01_space-other_T2w_seg-manual.nii.gz} | 0 ...=> sub-beijingVerio02_space-other_T1w_labels-disc-manual.json} | 0 ... sub-beijingVerio02_space-other_T1w_labels-disc-manual.nii.gz} | 0 ...al.json => sub-beijingVerio02_space-other_T1w_seg-manual.json} | 0 ...ii.gz => sub-beijingVerio02_space-other_T1w_seg-manual.nii.gz} | 0 ...json => sub-beijingVerio02_space-other_T2star_seg-manual.json} | 0 ...gz => sub-beijingVerio02_space-other_T2star_seg-manual.nii.gz} | 0 ...=> sub-beijingVerio02_space-other_T2w_labels-disc-manual.json} | 0 ... sub-beijingVerio02_space-other_T2w_labels-disc-manual.nii.gz} | 0 ...al.json => sub-beijingVerio02_space-other_T2w_seg-manual.json} | 0 ...ii.gz => sub-beijingVerio02_space-other_T2w_seg-manual.nii.gz} | 0 ...sub-beijingVerio03_space-other_T1w_RPI_r_labels-manual.nii.gz} | 0 ...=> sub-beijingVerio03_space-other_T1w_labels-disc-manual.json} | 0 ... sub-beijingVerio03_space-other_T1w_labels-disc-manual.nii.gz} | 0 ...al.json => sub-beijingVerio03_space-other_T1w_seg-manual.json} | 0 ...ii.gz => sub-beijingVerio03_space-other_T1w_seg-manual.nii.gz} | 0 ...json => 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sub-brnoCeitec06_space-other_T2w_seg-manual.json} | 0 ....nii.gz => sub-brnoCeitec06_space-other_T2w_seg-manual.nii.gz} | 0 ...=> sub-brnoUhb01_flip-1_mt-on_space-other_MTS_seg-manual.json} | 0 ... sub-brnoUhb01_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} | 0 ...> sub-brnoUhb01_flip-2_mt-off_space-other_MTS_seg-manual.json} | 0 ...sub-brnoUhb01_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} | 0 ...son => sub-brnoUhb01_space-other_T1w_RPI_r_labels-manual.json} | 0 ...z => sub-brnoUhb01_space-other_T1w_RPI_r_labels-manual.nii.gz} | 0 ...json => sub-brnoUhb01_space-other_T1w_labels-disc-manual.json} | 0 ...gz => sub-brnoUhb01_space-other_T1w_labels-disc-manual.nii.gz} | 0 ...-manual.json => sub-brnoUhb01_space-other_T1w_seg-manual.json} | 0 ...ual.nii.gz => sub-brnoUhb01_space-other_T1w_seg-manual.nii.gz} | 0 ...nual.json => sub-brnoUhb01_space-other_T2star_seg-manual.json} | 0 ....nii.gz => sub-brnoUhb01_space-other_T2star_seg-manual.nii.gz} | 0 ...json => sub-brnoUhb01_space-other_T2w_labels-disc-manual.json} | 0 ...gz => sub-brnoUhb01_space-other_T2w_labels-disc-manual.nii.gz} | 0 ...-manual.json => sub-brnoUhb01_space-other_T2w_seg-manual.json} | 0 ...ual.nii.gz => sub-brnoUhb01_space-other_T2w_seg-manual.nii.gz} | 0 ...=> sub-brnoUhb02_flip-1_mt-on_space-other_MTS_seg-manual.json} | 0 ... sub-brnoUhb02_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} | 0 ...> sub-brnoUhb02_flip-2_mt-off_space-other_MTS_seg-manual.json} | 0 ...sub-brnoUhb02_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} | 0 ...json => sub-brnoUhb02_space-other_T1w_labels-disc-manual.json} | 0 ...gz => sub-brnoUhb02_space-other_T1w_labels-disc-manual.nii.gz} | 0 ...-manual.json => sub-brnoUhb02_space-other_T1w_seg-manual.json} | 0 ...ual.nii.gz => sub-brnoUhb02_space-other_T1w_seg-manual.nii.gz} | 0 ...nual.json => sub-brnoUhb02_space-other_T2star_seg-manual.json} | 0 ....nii.gz => sub-brnoUhb02_space-other_T2star_seg-manual.nii.gz} | 0 ...json => sub-brnoUhb02_space-other_T2w_labels-disc-manual.json} | 0 ...gz => sub-brnoUhb02_space-other_T2w_labels-disc-manual.nii.gz} | 0 ...-manual.json => sub-brnoUhb02_space-other_T2w_seg-manual.json} | 0 ...ual.nii.gz => sub-brnoUhb02_space-other_T2w_seg-manual.nii.gz} | 0 ...=> sub-brnoUhb03_flip-1_mt-on_space-other_MTS_seg-manual.json} | 0 ... sub-brnoUhb03_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} | 0 ...> sub-brnoUhb03_flip-2_mt-off_space-other_MTS_seg-manual.json} | 0 ...sub-brnoUhb03_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} | 0 ...json => sub-brnoUhb03_space-other_T1w_labels-disc-manual.json} | 0 ...gz => sub-brnoUhb03_space-other_T1w_labels-disc-manual.nii.gz} | 0 ...-manual.json => sub-brnoUhb03_space-other_T1w_seg-manual.json} | 0 ...ual.nii.gz => sub-brnoUhb03_space-other_T1w_seg-manual.nii.gz} | 0 ...nual.json => sub-brnoUhb03_space-other_T2star_seg-manual.json} | 0 ....nii.gz => sub-brnoUhb03_space-other_T2star_seg-manual.nii.gz} | 0 ...json => sub-brnoUhb03_space-other_T2w_labels-disc-manual.json} | 0 ...gz => sub-brnoUhb03_space-other_T2w_labels-disc-manual.nii.gz} | 0 ...-manual.json => sub-brnoUhb03_space-other_T2w_seg-manual.json} | 0 ...ual.nii.gz => sub-brnoUhb03_space-other_T2w_seg-manual.nii.gz} | 0 ...=> sub-brnoUhb04_flip-1_mt-on_space-other_MTS_seg-manual.json} | 0 ... sub-brnoUhb04_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} | 0 ...> sub-brnoUhb04_flip-2_mt-off_space-other_MTS_seg-manual.json} | 0 ...sub-brnoUhb04_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} | 0 ...json => sub-brnoUhb04_space-other_T1w_labels-disc-manual.json} | 0 ...gz => sub-brnoUhb04_space-other_T1w_labels-disc-manual.nii.gz} | 0 ...-manual.json => sub-brnoUhb04_space-other_T1w_seg-manual.json} | 0 ...ual.nii.gz => sub-brnoUhb04_space-other_T1w_seg-manual.nii.gz} | 0 ...nual.json => sub-brnoUhb04_space-other_T2star_seg-manual.json} | 0 ....nii.gz => sub-brnoUhb04_space-other_T2star_seg-manual.nii.gz} | 0 ...json => sub-brnoUhb04_space-other_T2w_labels-disc-manual.json} | 0 ...gz => sub-brnoUhb04_space-other_T2w_labels-disc-manual.nii.gz} | 0 ...-manual.json => sub-brnoUhb04_space-other_T2w_seg-manual.json} | 0 ...ual.nii.gz => sub-brnoUhb04_space-other_T2w_seg-manual.nii.gz} | 0 ...=> sub-brnoUhb05_flip-1_mt-on_space-other_MTS_seg-manual.json} | 0 ... sub-brnoUhb05_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} | 0 ...> sub-brnoUhb05_flip-2_mt-off_space-other_MTS_seg-manual.json} | 0 ...sub-brnoUhb05_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} | 0 ...json => sub-brnoUhb05_space-other_T1w_labels-disc-manual.json} | 0 ...gz => sub-brnoUhb05_space-other_T1w_labels-disc-manual.nii.gz} | 0 ...-manual.json => sub-brnoUhb05_space-other_T1w_seg-manual.json} | 0 ...ual.nii.gz => sub-brnoUhb05_space-other_T1w_seg-manual.nii.gz} | 0 ...nual.json => sub-brnoUhb05_space-other_T2star_seg-manual.json} | 0 ....nii.gz => sub-brnoUhb05_space-other_T2star_seg-manual.nii.gz} | 0 ...json => sub-brnoUhb05_space-other_T2w_labels-disc-manual.json} | 0 ...gz => sub-brnoUhb05_space-other_T2w_labels-disc-manual.nii.gz} | 0 ...-manual.json => sub-brnoUhb05_space-other_T2w_seg-manual.json} | 0 ...ual.nii.gz => sub-brnoUhb05_space-other_T2w_seg-manual.nii.gz} | 0 ...=> sub-brnoUhb06_flip-1_mt-on_space-other_MTS_seg-manual.json} | 0 ... sub-brnoUhb06_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} | 0 ...> sub-brnoUhb06_flip-2_mt-off_space-other_MTS_seg-manual.json} | 0 ...sub-brnoUhb06_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} | 0 ...json => sub-brnoUhb06_space-other_T1w_labels-disc-manual.json} | 0 ...gz => sub-brnoUhb06_space-other_T1w_labels-disc-manual.nii.gz} | 0 ...-manual.json => sub-brnoUhb06_space-other_T1w_seg-manual.json} | 0 ...ual.nii.gz => sub-brnoUhb06_space-other_T1w_seg-manual.nii.gz} | 0 ...nual.json => sub-brnoUhb06_space-other_T2star_seg-manual.json} | 0 ....nii.gz => sub-brnoUhb06_space-other_T2star_seg-manual.nii.gz} | 0 ...json => sub-brnoUhb06_space-other_T2w_labels-disc-manual.json} | 0 ...gz => sub-brnoUhb06_space-other_T2w_labels-disc-manual.nii.gz} | 0 ...-manual.json => sub-brnoUhb06_space-other_T2w_seg-manual.json} | 0 ...ual.nii.gz => sub-brnoUhb06_space-other_T2w_seg-manual.nii.gz} | 0 ...=> sub-brnoUhb07_flip-1_mt-on_space-other_MTS_seg-manual.json} | 0 ... sub-brnoUhb07_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} | 0 ...> sub-brnoUhb07_flip-2_mt-off_space-other_MTS_seg-manual.json} | 0 ...sub-brnoUhb07_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} | 0 ...json => sub-brnoUhb07_space-other_T1w_labels-disc-manual.json} | 0 ...gz => sub-brnoUhb07_space-other_T1w_labels-disc-manual.nii.gz} | 0 ...-manual.json => sub-brnoUhb07_space-other_T1w_seg-manual.json} | 0 ...ual.nii.gz => sub-brnoUhb07_space-other_T1w_seg-manual.nii.gz} | 0 ...nual.json => sub-brnoUhb07_space-other_T2star_seg-manual.json} | 0 ....nii.gz => sub-brnoUhb07_space-other_T2star_seg-manual.nii.gz} | 0 ...json => sub-brnoUhb07_space-other_T2w_labels-disc-manual.json} | 0 ...gz => sub-brnoUhb07_space-other_T2w_labels-disc-manual.nii.gz} | 0 ...-manual.json => sub-brnoUhb07_space-other_T2w_seg-manual.json} | 0 ...ual.nii.gz => sub-brnoUhb07_space-other_T2w_seg-manual.nii.gz} | 0 ...=> sub-brnoUhb08_flip-1_mt-on_space-other_MTS_seg-manual.json} | 0 ... sub-brnoUhb08_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} | 0 ...> sub-brnoUhb08_flip-2_mt-off_space-other_MTS_seg-manual.json} | 0 ...sub-brnoUhb08_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} | 0 ...son => sub-brnoUhb08_space-other_T1w_RPI_r_labels-manual.json} | 0 ...z => sub-brnoUhb08_space-other_T1w_RPI_r_labels-manual.nii.gz} | 0 ...json => sub-brnoUhb08_space-other_T1w_labels-disc-manual.json} | 0 ...gz => sub-brnoUhb08_space-other_T1w_labels-disc-manual.nii.gz} | 0 ...-manual.json => sub-brnoUhb08_space-other_T1w_seg-manual.json} | 0 ...ual.nii.gz => sub-brnoUhb08_space-other_T1w_seg-manual.nii.gz} | 0 ...nual.json => sub-brnoUhb08_space-other_T2star_seg-manual.json} | 0 ....nii.gz => sub-brnoUhb08_space-other_T2star_seg-manual.nii.gz} | 0 ...json => sub-brnoUhb08_space-other_T2w_labels-disc-manual.json} | 0 ...gz => sub-brnoUhb08_space-other_T2w_labels-disc-manual.nii.gz} | 0 ...-manual.json => sub-brnoUhb08_space-other_T2w_seg-manual.json} | 0 ...ual.nii.gz => sub-brnoUhb08_space-other_T2w_seg-manual.nii.gz} | 0 ...=> sub-cardiff01_flip-1_mt-on_space-other_MTS_seg-manual.json} | 0 ... sub-cardiff01_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} | 0 ...> sub-cardiff01_flip-2_mt-off_space-other_MTS_seg-manual.json} | 0 ...sub-cardiff01_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} | 0 ...json => sub-cardiff01_space-other_T1w_labels-disc-manual.json} | 0 ...gz => sub-cardiff01_space-other_T1w_labels-disc-manual.nii.gz} | 0 ...-manual.json => sub-cardiff01_space-other_T1w_seg-manual.json} | 0 ...ual.nii.gz => sub-cardiff01_space-other_T1w_seg-manual.nii.gz} | 0 ...nual.json => sub-cardiff01_space-other_T2star_seg-manual.json} | 0 ....nii.gz => sub-cardiff01_space-other_T2star_seg-manual.nii.gz} | 0 ...json => sub-cardiff01_space-other_T2w_labels-disc-manual.json} | 0 ...gz => sub-cardiff01_space-other_T2w_labels-disc-manual.nii.gz} | 0 ...-manual.json => sub-cardiff01_space-other_T2w_seg-manual.json} | 0 ...ual.nii.gz => sub-cardiff01_space-other_T2w_seg-manual.nii.gz} | 0 ...=> sub-cardiff02_flip-1_mt-on_space-other_MTS_seg-manual.json} | 0 ... sub-cardiff02_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} | 0 ...> sub-cardiff02_flip-2_mt-off_space-other_MTS_seg-manual.json} | 0 ...sub-cardiff02_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} | 0 ...json => sub-cardiff02_space-other_T1w_labels-disc-manual.json} | 0 ...gz => sub-cardiff02_space-other_T1w_labels-disc-manual.nii.gz} | 0 ...-manual.json => sub-cardiff02_space-other_T1w_seg-manual.json} | 0 ...ual.nii.gz => sub-cardiff02_space-other_T1w_seg-manual.nii.gz} | 0 ...nual.json => sub-cardiff02_space-other_T2star_seg-manual.json} | 0 ....nii.gz => sub-cardiff02_space-other_T2star_seg-manual.nii.gz} | 0 ...json => sub-cardiff02_space-other_T2w_labels-disc-manual.json} | 0 ...gz => sub-cardiff02_space-other_T2w_labels-disc-manual.nii.gz} | 0 ...-manual.json => sub-cardiff02_space-other_T2w_seg-manual.json} | 0 ...ual.nii.gz => sub-cardiff02_space-other_T2w_seg-manual.nii.gz} | 0 ...=> sub-cardiff03_flip-1_mt-on_space-other_MTS_seg-manual.json} | 0 ... sub-cardiff03_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} | 0 ...> sub-cardiff03_flip-2_mt-off_space-other_MTS_seg-manual.json} | 0 ...sub-cardiff03_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} | 0 ...json => sub-cardiff03_space-other_T1w_labels-disc-manual.json} | 0 ...gz => sub-cardiff03_space-other_T1w_labels-disc-manual.nii.gz} | 0 ...-manual.json => sub-cardiff03_space-other_T1w_seg-manual.json} | 0 ...ual.nii.gz => sub-cardiff03_space-other_T1w_seg-manual.nii.gz} | 0 ...nual.json => sub-cardiff03_space-other_T2star_seg-manual.json} | 0 ....nii.gz => sub-cardiff03_space-other_T2star_seg-manual.nii.gz} | 0 ...json => sub-cardiff03_space-other_T2w_labels-disc-manual.json} | 0 ...gz => sub-cardiff03_space-other_T2w_labels-disc-manual.nii.gz} | 0 ...-manual.json => sub-cardiff03_space-other_T2w_seg-manual.json} | 0 ...ual.nii.gz => sub-cardiff03_space-other_T2w_seg-manual.nii.gz} | 0 ...=> sub-cardiff04_flip-1_mt-on_space-other_MTS_seg-manual.json} | 0 ... sub-cardiff04_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} | 0 ...> sub-cardiff04_flip-2_mt-off_space-other_MTS_seg-manual.json} | 0 ...sub-cardiff04_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} | 0 ...json => sub-cardiff04_space-other_T1w_labels-disc-manual.json} | 0 ...gz => sub-cardiff04_space-other_T1w_labels-disc-manual.nii.gz} | 0 ...-manual.json => sub-cardiff04_space-other_T1w_seg-manual.json} | 0 ...ual.nii.gz => sub-cardiff04_space-other_T1w_seg-manual.nii.gz} | 0 ...nual.json => sub-cardiff04_space-other_T2star_seg-manual.json} | 0 ....nii.gz => sub-cardiff04_space-other_T2star_seg-manual.nii.gz} | 0 ...json => sub-cardiff04_space-other_T2w_labels-disc-manual.json} | 0 ...gz => sub-cardiff04_space-other_T2w_labels-disc-manual.nii.gz} | 0 ...-manual.json => sub-cardiff04_space-other_T2w_seg-manual.json} | 0 ...ual.nii.gz => sub-cardiff04_space-other_T2w_seg-manual.nii.gz} | 0 ...=> sub-cardiff05_flip-1_mt-on_space-other_MTS_seg-manual.json} | 0 ... sub-cardiff05_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} | 0 ...> sub-cardiff05_flip-2_mt-off_space-other_MTS_seg-manual.json} | 0 ...sub-cardiff05_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} | 0 ...z => sub-cardiff05_space-other_T1w_RPI_r_labels-manual.nii.gz} | 0 ...json => sub-cardiff05_space-other_T1w_labels-disc-manual.json} | 0 ...gz => sub-cardiff05_space-other_T1w_labels-disc-manual.nii.gz} | 0 ...-manual.json => sub-cardiff05_space-other_T1w_seg-manual.json} | 0 ...ual.nii.gz => sub-cardiff05_space-other_T1w_seg-manual.nii.gz} | 0 ...nual.json => sub-cardiff05_space-other_T2star_seg-manual.json} | 0 ....nii.gz => sub-cardiff05_space-other_T2star_seg-manual.nii.gz} | 0 ...json => sub-cardiff05_space-other_T2w_labels-disc-manual.json} | 0 ...gz => sub-cardiff05_space-other_T2w_labels-disc-manual.nii.gz} | 0 ...-manual.json => sub-cardiff05_space-other_T2w_seg-manual.json} | 0 ...ual.nii.gz => sub-cardiff05_space-other_T2w_seg-manual.nii.gz} | 0 ...=> sub-cardiff06_flip-1_mt-on_space-other_MTS_seg-manual.json} | 0 ... sub-cardiff06_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} | 0 ...> sub-cardiff06_flip-2_mt-off_space-other_MTS_seg-manual.json} | 0 ...sub-cardiff06_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} | 0 ...json => sub-cardiff06_space-other_T1w_labels-disc-manual.json} | 0 ...gz => sub-cardiff06_space-other_T1w_labels-disc-manual.nii.gz} | 0 ...-manual.json => sub-cardiff06_space-other_T1w_seg-manual.json} | 0 ...ual.nii.gz => sub-cardiff06_space-other_T1w_seg-manual.nii.gz} | 0 ...nual.json => sub-cardiff06_space-other_T2star_seg-manual.json} | 0 ....nii.gz => sub-cardiff06_space-other_T2star_seg-manual.nii.gz} | 0 ...json => sub-cardiff06_space-other_T2w_labels-disc-manual.json} | 0 ...gz => sub-cardiff06_space-other_T2w_labels-disc-manual.nii.gz} | 0 ...-manual.json => sub-cardiff06_space-other_T2w_seg-manual.json} | 0 ...ual.nii.gz => sub-cardiff06_space-other_T2w_seg-manual.nii.gz} | 0 ...n => sub-cmrra01_flip-1_mt-on_space-other_MTS_seg-manual.json} | 0 ...=> sub-cmrra01_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} | 0 ... => sub-cmrra01_flip-2_mt-off_space-other_MTS_seg-manual.json} | 0 ...> sub-cmrra01_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} | 0 ...l.json => sub-cmrra01_space-other_T1w_labels-disc-manual.json} | 0 ...i.gz => sub-cmrra01_space-other_T1w_labels-disc-manual.nii.gz} | 0 ...eg-manual.json => sub-cmrra01_space-other_T1w_seg-manual.json} | 0 ...anual.nii.gz => sub-cmrra01_space-other_T1w_seg-manual.nii.gz} | 0 ...manual.json => sub-cmrra01_space-other_T2star_seg-manual.json} | 0 ...al.nii.gz => sub-cmrra01_space-other_T2star_seg-manual.nii.gz} | 0 ...l.json => sub-cmrra01_space-other_T2w_labels-disc-manual.json} | 0 ...i.gz => sub-cmrra01_space-other_T2w_labels-disc-manual.nii.gz} | 0 ...eg-manual.json => sub-cmrra01_space-other_T2w_seg-manual.json} | 0 ...anual.nii.gz => sub-cmrra01_space-other_T2w_seg-manual.nii.gz} | 0 ...n => sub-cmrra02_flip-1_mt-on_space-other_MTS_seg-manual.json} | 0 ...=> sub-cmrra02_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} | 0 ... => sub-cmrra02_flip-2_mt-off_space-other_MTS_seg-manual.json} | 0 ...> sub-cmrra02_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} | 0 ...l.json => sub-cmrra02_space-other_T1w_labels-disc-manual.json} | 0 ...i.gz => sub-cmrra02_space-other_T1w_labels-disc-manual.nii.gz} | 0 ...eg-manual.json => sub-cmrra02_space-other_T1w_seg-manual.json} | 0 ...anual.nii.gz => sub-cmrra02_space-other_T1w_seg-manual.nii.gz} | 0 ...manual.json => sub-cmrra02_space-other_T2star_seg-manual.json} | 0 ...al.nii.gz => sub-cmrra02_space-other_T2star_seg-manual.nii.gz} | 0 ...l.json => sub-cmrra02_space-other_T2w_labels-disc-manual.json} | 0 ...i.gz => sub-cmrra02_space-other_T2w_labels-disc-manual.nii.gz} | 0 ...eg-manual.json => sub-cmrra02_space-other_T2w_seg-manual.json} | 0 ...anual.nii.gz => sub-cmrra02_space-other_T2w_seg-manual.nii.gz} | 0 ...n => sub-cmrra03_flip-1_mt-on_space-other_MTS_seg-manual.json} | 0 ...=> sub-cmrra03_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} | 0 ... => sub-cmrra03_flip-2_mt-off_space-other_MTS_seg-manual.json} | 0 ...> sub-cmrra03_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} | 0 ...l.json => sub-cmrra03_space-other_T1w_labels-disc-manual.json} | 0 ...i.gz => sub-cmrra03_space-other_T1w_labels-disc-manual.nii.gz} | 0 ...eg-manual.json => sub-cmrra03_space-other_T1w_seg-manual.json} | 0 ...anual.nii.gz => sub-cmrra03_space-other_T1w_seg-manual.nii.gz} | 0 ...manual.json => sub-cmrra03_space-other_T2star_seg-manual.json} | 0 ...al.nii.gz => sub-cmrra03_space-other_T2star_seg-manual.nii.gz} | 0 ...l.json => sub-cmrra03_space-other_T2w_labels-disc-manual.json} | 0 ...i.gz => sub-cmrra03_space-other_T2w_labels-disc-manual.nii.gz} | 0 ...eg-manual.json => sub-cmrra03_space-other_T2w_seg-manual.json} | 0 ...anual.nii.gz => sub-cmrra03_space-other_T2w_seg-manual.nii.gz} | 0 ...n => sub-cmrra04_flip-1_mt-on_space-other_MTS_seg-manual.json} | 0 ...=> sub-cmrra04_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} | 0 ... => sub-cmrra04_flip-2_mt-off_space-other_MTS_seg-manual.json} | 0 ...> sub-cmrra04_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} | 0 ...l.json => sub-cmrra04_space-other_T1w_labels-disc-manual.json} | 0 ...i.gz => sub-cmrra04_space-other_T1w_labels-disc-manual.nii.gz} | 0 ...eg-manual.json => sub-cmrra04_space-other_T1w_seg-manual.json} | 0 ...anual.nii.gz => sub-cmrra04_space-other_T1w_seg-manual.nii.gz} | 0 ...manual.json => sub-cmrra04_space-other_T2star_seg-manual.json} | 0 ...al.nii.gz => sub-cmrra04_space-other_T2star_seg-manual.nii.gz} | 0 ...l.json => sub-cmrra04_space-other_T2w_labels-disc-manual.json} | 0 ...i.gz => sub-cmrra04_space-other_T2w_labels-disc-manual.nii.gz} | 0 ...eg-manual.json => sub-cmrra04_space-other_T2w_seg-manual.json} | 0 ...anual.nii.gz => sub-cmrra04_space-other_T2w_seg-manual.nii.gz} | 0 ...n => sub-cmrra05_flip-1_mt-on_space-other_MTS_seg-manual.json} | 0 ...=> sub-cmrra05_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} | 0 ... => sub-cmrra05_flip-2_mt-off_space-other_MTS_seg-manual.json} | 0 ...> sub-cmrra05_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} | 0 ....gz => sub-cmrra05_space-other_T1w_RPI_r_labels-manual.nii.gz} | 0 ...l.json => sub-cmrra05_space-other_T1w_labels-disc-manual.json} | 0 ...i.gz => sub-cmrra05_space-other_T1w_labels-disc-manual.nii.gz} | 0 ...eg-manual.json => sub-cmrra05_space-other_T1w_seg-manual.json} | 0 ...anual.nii.gz => sub-cmrra05_space-other_T1w_seg-manual.nii.gz} | 0 ...manual.json => sub-cmrra05_space-other_T2star_seg-manual.json} | 0 ...al.nii.gz => sub-cmrra05_space-other_T2star_seg-manual.nii.gz} | 0 ...l.json => sub-cmrra05_space-other_T2w_labels-disc-manual.json} | 0 ...i.gz => sub-cmrra05_space-other_T2w_labels-disc-manual.nii.gz} | 0 ...eg-manual.json => sub-cmrra05_space-other_T2w_seg-manual.json} | 0 ...anual.nii.gz => sub-cmrra05_space-other_T2w_seg-manual.nii.gz} | 0 ...n => sub-cmrra06_flip-1_mt-on_space-other_MTS_seg-manual.json} | 0 ...=> sub-cmrra06_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} | 0 ... => sub-cmrra06_flip-2_mt-off_space-other_MTS_seg-manual.json} | 0 ...> sub-cmrra06_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} | 0 ...l.json => sub-cmrra06_space-other_T1w_labels-disc-manual.json} | 0 ...i.gz => sub-cmrra06_space-other_T1w_labels-disc-manual.nii.gz} | 0 ...eg-manual.json => 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sub-geneva01_space-other_T2w_seg-manual.nii.gz} | 0 ... => sub-geneva02_flip-1_mt-on_space-other_MTS_seg-manual.json} | 0 ...> sub-geneva02_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} | 0 ...=> sub-geneva02_flip-2_mt-off_space-other_MTS_seg-manual.json} | 0 ... sub-geneva02_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} | 0 ....json => sub-geneva02_space-other_T1w_labels-disc-manual.json} | 0 ....gz => sub-geneva02_space-other_T1w_labels-disc-manual.nii.gz} | 0 ...g-manual.json => sub-geneva02_space-other_T1w_seg-manual.json} | 0 ...nual.nii.gz => sub-geneva02_space-other_T1w_seg-manual.nii.gz} | 0 ...anual.json => sub-geneva02_space-other_T2star_seg-manual.json} | 0 ...l.nii.gz => sub-geneva02_space-other_T2star_seg-manual.nii.gz} | 0 ....json => sub-geneva02_space-other_T2w_labels-disc-manual.json} | 0 ....gz => sub-geneva02_space-other_T2w_labels-disc-manual.nii.gz} | 0 ...g-manual.json => sub-geneva02_space-other_T2w_seg-manual.json} | 0 ...nual.nii.gz => sub-geneva02_space-other_T2w_seg-manual.nii.gz} | 0 ... => sub-geneva03_flip-1_mt-on_space-other_MTS_seg-manual.json} | 0 ...> sub-geneva03_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} | 0 ...=> sub-geneva03_flip-2_mt-off_space-other_MTS_seg-manual.json} | 0 ... sub-geneva03_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} | 0 ....json => sub-geneva03_space-other_T1w_labels-disc-manual.json} | 0 ....gz => sub-geneva03_space-other_T1w_labels-disc-manual.nii.gz} | 0 ...g-manual.json => sub-geneva03_space-other_T1w_seg-manual.json} | 0 ...nual.nii.gz => sub-geneva03_space-other_T1w_seg-manual.nii.gz} | 0 ...anual.json => sub-geneva03_space-other_T2star_seg-manual.json} | 0 ...l.nii.gz => sub-geneva03_space-other_T2star_seg-manual.nii.gz} | 0 ....json => sub-geneva03_space-other_T2w_labels-disc-manual.json} | 0 ....gz => sub-geneva03_space-other_T2w_labels-disc-manual.nii.gz} | 0 ...g-manual.json => sub-geneva03_space-other_T2w_seg-manual.json} | 0 ...nual.nii.gz => sub-geneva03_space-other_T2w_seg-manual.nii.gz} | 0 ... => sub-geneva04_flip-1_mt-on_space-other_MTS_seg-manual.json} | 0 ...> sub-geneva04_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} | 0 ...=> sub-geneva04_flip-2_mt-off_space-other_MTS_seg-manual.json} | 0 ... sub-geneva04_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} | 0 ....json => sub-geneva04_space-other_T1w_labels-disc-manual.json} | 0 ....gz => sub-geneva04_space-other_T1w_labels-disc-manual.nii.gz} | 0 ...g-manual.json => sub-geneva04_space-other_T1w_seg-manual.json} | 0 ...nual.nii.gz => sub-geneva04_space-other_T1w_seg-manual.nii.gz} | 0 ...anual.json => sub-geneva04_space-other_T2star_seg-manual.json} | 0 ...l.nii.gz => sub-geneva04_space-other_T2star_seg-manual.nii.gz} | 0 ...anual.json => sub-geneva04_space-other_T2w_csfseg-manual.json} | 0 ...l.nii.gz => sub-geneva04_space-other_T2w_csfseg-manual.nii.gz} | 0 ....json => sub-geneva04_space-other_T2w_labels-disc-manual.json} | 0 ....gz => 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sub-hamburg01_space-other_T2w_labels-disc-manual.nii.gz} | 0 ...-manual.json => sub-hamburg01_space-other_T2w_seg-manual.json} | 0 ...ual.nii.gz => sub-hamburg01_space-other_T2w_seg-manual.nii.gz} | 0 ...=> sub-hamburg02_flip-1_mt-on_space-other_MTS_seg-manual.json} | 0 ... sub-hamburg02_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} | 0 ...> sub-hamburg02_flip-2_mt-off_space-other_MTS_seg-manual.json} | 0 ...sub-hamburg02_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} | 0 ...json => sub-hamburg02_space-other_T1w_labels-disc-manual.json} | 0 ...gz => sub-hamburg02_space-other_T1w_labels-disc-manual.nii.gz} | 0 ...-manual.json => sub-hamburg02_space-other_T1w_seg-manual.json} | 0 ...ual.nii.gz => sub-hamburg02_space-other_T1w_seg-manual.nii.gz} | 0 ...nual.json => sub-hamburg02_space-other_T2star_seg-manual.json} | 0 ....nii.gz => sub-hamburg02_space-other_T2star_seg-manual.nii.gz} | 0 ...json => sub-hamburg02_space-other_T2w_labels-disc-manual.json} | 0 ...gz => sub-hamburg02_space-other_T2w_labels-disc-manual.nii.gz} | 0 ...-manual.json => sub-hamburg02_space-other_T2w_seg-manual.json} | 0 ...ual.nii.gz => sub-hamburg02_space-other_T2w_seg-manual.nii.gz} | 0 ...=> sub-hamburg03_flip-1_mt-on_space-other_MTS_seg-manual.json} | 0 ... sub-hamburg03_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} | 0 ...> sub-hamburg03_flip-2_mt-off_space-other_MTS_seg-manual.json} | 0 ...sub-hamburg03_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} | 0 ...json => sub-hamburg03_space-other_T1w_labels-disc-manual.json} | 0 ...gz => sub-hamburg03_space-other_T1w_labels-disc-manual.nii.gz} | 0 ...-manual.json => sub-hamburg03_space-other_T1w_seg-manual.json} | 0 ...ual.nii.gz => sub-hamburg03_space-other_T1w_seg-manual.nii.gz} | 0 ...nual.json => sub-hamburg03_space-other_T2star_seg-manual.json} | 0 ....nii.gz => sub-hamburg03_space-other_T2star_seg-manual.nii.gz} | 0 ...json => sub-hamburg03_space-other_T2w_labels-disc-manual.json} | 0 ...gz => 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sub-mountSinai02_space-other_T1w_labels-disc-manual.json} | 0 ...=> sub-mountSinai02_space-other_T1w_labels-disc-manual.nii.gz} | 0 ...nual.json => sub-mountSinai02_space-other_T1w_seg-manual.json} | 0 ....nii.gz => sub-mountSinai02_space-other_T1w_seg-manual.nii.gz} | 0 ...l.json => sub-mountSinai02_space-other_T2star_seg-manual.json} | 0 ...i.gz => sub-mountSinai02_space-other_T2star_seg-manual.nii.gz} | 0 ...n => sub-mountSinai02_space-other_T2w_labels-disc-manual.json} | 0 ...=> sub-mountSinai02_space-other_T2w_labels-disc-manual.nii.gz} | 0 ...nual.json => sub-mountSinai02_space-other_T2w_seg-manual.json} | 0 ....nii.gz => sub-mountSinai02_space-other_T2w_seg-manual.nii.gz} | 0 ...sub-mountSinai03_flip-1_mt-on_space-other_MTS_seg-manual.json} | 0 ...b-mountSinai03_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} | 0 ...ub-mountSinai03_flip-2_mt-off_space-other_MTS_seg-manual.json} | 0 ...-mountSinai03_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} | 0 ...n => sub-mountSinai03_space-other_T1w_labels-disc-manual.json} | 0 ...=> sub-mountSinai03_space-other_T1w_labels-disc-manual.nii.gz} | 0 ...nual.json => sub-mountSinai03_space-other_T1w_seg-manual.json} | 0 ....nii.gz => sub-mountSinai03_space-other_T1w_seg-manual.nii.gz} | 0 ...l.json => sub-mountSinai03_space-other_T2star_seg-manual.json} | 0 ...i.gz => sub-mountSinai03_space-other_T2star_seg-manual.nii.gz} | 0 ...n => sub-mountSinai03_space-other_T2w_labels-disc-manual.json} | 0 ...=> sub-mountSinai03_space-other_T2w_labels-disc-manual.nii.gz} | 0 ...nual.json => sub-mountSinai03_space-other_T2w_seg-manual.json} | 0 ....nii.gz => sub-mountSinai03_space-other_T2w_seg-manual.nii.gz} | 0 ...sub-mountSinai04_flip-1_mt-on_space-other_MTS_seg-manual.json} | 0 ...b-mountSinai04_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} | 0 ...ub-mountSinai04_flip-2_mt-off_space-other_MTS_seg-manual.json} | 0 ...-mountSinai04_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} | 0 ...n => sub-mountSinai04_space-other_T1w_labels-disc-manual.json} | 0 ...=> sub-mountSinai04_space-other_T1w_labels-disc-manual.nii.gz} | 0 ...nual.json => sub-mountSinai04_space-other_T1w_seg-manual.json} | 0 ....nii.gz => sub-mountSinai04_space-other_T1w_seg-manual.nii.gz} | 0 ...l.json => sub-mountSinai04_space-other_T2star_seg-manual.json} | 0 ...i.gz => sub-mountSinai04_space-other_T2star_seg-manual.nii.gz} | 0 ...n => sub-mountSinai04_space-other_T2w_labels-disc-manual.json} | 0 ...=> sub-mountSinai04_space-other_T2w_labels-disc-manual.nii.gz} | 0 ...nual.json => sub-mountSinai04_space-other_T2w_seg-manual.json} | 0 ....nii.gz => sub-mountSinai04_space-other_T2w_seg-manual.nii.gz} | 0 ...sub-mountSinai05_flip-1_mt-on_space-other_MTS_seg-manual.json} | 0 ...b-mountSinai05_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} | 0 ...ub-mountSinai05_flip-2_mt-off_space-other_MTS_seg-manual.json} | 0 ...-mountSinai05_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} | 0 ...n => sub-mountSinai05_space-other_T1w_labels-disc-manual.json} | 0 ...=> sub-mountSinai05_space-other_T1w_labels-disc-manual.nii.gz} | 0 ...nual.json => sub-mountSinai05_space-other_T1w_seg-manual.json} | 0 ....nii.gz => sub-mountSinai05_space-other_T1w_seg-manual.nii.gz} | 0 ...l.json => sub-mountSinai05_space-other_T2star_seg-manual.json} | 0 ...i.gz => sub-mountSinai05_space-other_T2star_seg-manual.nii.gz} | 0 ...n => sub-mountSinai05_space-other_T2w_labels-disc-manual.json} | 0 ...=> sub-mountSinai05_space-other_T2w_labels-disc-manual.nii.gz} | 0 ...nual.json => sub-mountSinai05_space-other_T2w_seg-manual.json} | 0 ....nii.gz => sub-mountSinai05_space-other_T2w_seg-manual.nii.gz} | 0 ...sub-mountSinai06_flip-1_mt-on_space-other_MTS_seg-manual.json} | 0 ...b-mountSinai06_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} | 0 ...ub-mountSinai06_flip-2_mt-off_space-other_MTS_seg-manual.json} | 0 ...-mountSinai06_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} | 0 ...n => sub-mountSinai06_space-other_T1w_labels-disc-manual.json} | 0 ...=> sub-mountSinai06_space-other_T1w_labels-disc-manual.nii.gz} | 0 ...nual.json => sub-mountSinai06_space-other_T1w_seg-manual.json} | 0 ....nii.gz => sub-mountSinai06_space-other_T1w_seg-manual.nii.gz} | 0 ...l.json => sub-mountSinai06_space-other_T2star_seg-manual.json} | 0 ...i.gz => sub-mountSinai06_space-other_T2star_seg-manual.nii.gz} | 0 ...n => sub-mountSinai06_space-other_T2w_labels-disc-manual.json} | 0 ...=> sub-mountSinai06_space-other_T2w_labels-disc-manual.nii.gz} | 0 ...nual.json => sub-mountSinai06_space-other_T2w_seg-manual.json} | 0 ....nii.gz => sub-mountSinai06_space-other_T2w_seg-manual.nii.gz} | 0 ... => sub-mpicbs01_flip-1_mt-on_space-other_MTS_seg-manual.json} | 0 ...> sub-mpicbs01_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} | 0 ...=> sub-mpicbs01_flip-2_mt-off_space-other_MTS_seg-manual.json} | 0 ... sub-mpicbs01_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} | 0 ...gz => sub-mpicbs01_space-other_T1w_RPI_r_labels-manual.nii.gz} | 0 ....json => sub-mpicbs01_space-other_T1w_labels-disc-manual.json} | 0 ....gz => sub-mpicbs01_space-other_T1w_labels-disc-manual.nii.gz} | 0 ...g-manual.json => sub-mpicbs01_space-other_T1w_seg-manual.json} | 0 ...nual.nii.gz => sub-mpicbs01_space-other_T1w_seg-manual.nii.gz} | 0 ...anual.json => sub-mpicbs01_space-other_T2star_seg-manual.json} | 0 ...l.nii.gz => sub-mpicbs01_space-other_T2star_seg-manual.nii.gz} | 0 ....json => sub-mpicbs01_space-other_T2w_labels-disc-manual.json} | 0 ....gz => sub-mpicbs01_space-other_T2w_labels-disc-manual.nii.gz} | 0 ...g-manual.json => sub-mpicbs01_space-other_T2w_seg-manual.json} | 0 ...nual.nii.gz => sub-mpicbs01_space-other_T2w_seg-manual.nii.gz} | 0 ... => sub-mpicbs02_flip-1_mt-on_space-other_MTS_seg-manual.json} | 0 ...> sub-mpicbs02_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} | 0 ...=> sub-mpicbs02_flip-2_mt-off_space-other_MTS_seg-manual.json} | 0 ... sub-mpicbs02_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} | 0 ....json => sub-mpicbs02_space-other_T1w_labels-disc-manual.json} | 0 ....gz => sub-mpicbs02_space-other_T1w_labels-disc-manual.nii.gz} | 0 ...g-manual.json => sub-mpicbs02_space-other_T1w_seg-manual.json} | 0 ...nual.nii.gz => sub-mpicbs02_space-other_T1w_seg-manual.nii.gz} | 0 ...anual.json => sub-mpicbs02_space-other_T2star_seg-manual.json} | 0 ...l.nii.gz => sub-mpicbs02_space-other_T2star_seg-manual.nii.gz} | 0 ....json => sub-mpicbs02_space-other_T2w_labels-disc-manual.json} | 0 ....gz => sub-mpicbs02_space-other_T2w_labels-disc-manual.nii.gz} | 0 ...g-manual.json => sub-mpicbs02_space-other_T2w_seg-manual.json} | 0 ...nual.nii.gz => sub-mpicbs02_space-other_T2w_seg-manual.nii.gz} | 0 ... => sub-mpicbs03_flip-1_mt-on_space-other_MTS_seg-manual.json} | 0 ...> sub-mpicbs03_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} | 0 ...=> sub-mpicbs03_flip-2_mt-off_space-other_MTS_seg-manual.json} | 0 ... sub-mpicbs03_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} | 0 ....json => sub-mpicbs03_space-other_T1w_labels-disc-manual.json} | 0 ....gz => sub-mpicbs03_space-other_T1w_labels-disc-manual.nii.gz} | 0 ...g-manual.json => sub-mpicbs03_space-other_T1w_seg-manual.json} | 0 ...nual.nii.gz => sub-mpicbs03_space-other_T1w_seg-manual.nii.gz} | 0 ...anual.json => sub-mpicbs03_space-other_T2star_seg-manual.json} | 0 ...l.nii.gz => sub-mpicbs03_space-other_T2star_seg-manual.nii.gz} | 0 ....json => sub-mpicbs03_space-other_T2w_labels-disc-manual.json} | 0 ....gz => sub-mpicbs03_space-other_T2w_labels-disc-manual.nii.gz} | 0 ...g-manual.json => sub-mpicbs03_space-other_T2w_seg-manual.json} | 0 ...nual.nii.gz => sub-mpicbs03_space-other_T2w_seg-manual.nii.gz} | 0 ... => sub-mpicbs05_flip-1_mt-on_space-other_MTS_seg-manual.json} | 0 ...> sub-mpicbs05_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} | 0 ...=> sub-mpicbs05_flip-2_mt-off_space-other_MTS_seg-manual.json} | 0 ... sub-mpicbs05_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} | 0 ....json => sub-mpicbs05_space-other_T1w_labels-disc-manual.json} | 0 ....gz => sub-mpicbs05_space-other_T1w_labels-disc-manual.nii.gz} | 0 ...g-manual.json => sub-mpicbs05_space-other_T1w_seg-manual.json} | 0 ...nual.nii.gz => sub-mpicbs05_space-other_T1w_seg-manual.nii.gz} | 0 ...anual.json => sub-mpicbs05_space-other_T2star_seg-manual.json} | 0 ...l.nii.gz => sub-mpicbs05_space-other_T2star_seg-manual.nii.gz} | 0 ....json => sub-mpicbs05_space-other_T2w_labels-disc-manual.json} | 0 ....gz => sub-mpicbs05_space-other_T2w_labels-disc-manual.nii.gz} | 0 ...g-manual.json => sub-mpicbs05_space-other_T2w_seg-manual.json} | 0 ...nual.nii.gz => sub-mpicbs05_space-other_T2w_seg-manual.nii.gz} | 0 ... => sub-mpicbs06_flip-1_mt-on_space-other_MTS_seg-manual.json} | 0 ...> sub-mpicbs06_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} | 0 ...=> sub-mpicbs06_flip-2_mt-off_space-other_MTS_seg-manual.json} | 0 ... sub-mpicbs06_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} | 0 ....json => sub-mpicbs06_space-other_T1w_labels-disc-manual.json} | 0 ....gz => sub-mpicbs06_space-other_T1w_labels-disc-manual.nii.gz} | 0 ...g-manual.json => sub-mpicbs06_space-other_T1w_seg-manual.json} | 0 ...nual.nii.gz => sub-mpicbs06_space-other_T1w_seg-manual.nii.gz} | 0 ...anual.json => sub-mpicbs06_space-other_T2star_seg-manual.json} | 0 ...l.nii.gz => sub-mpicbs06_space-other_T2star_seg-manual.nii.gz} | 0 ....json => sub-mpicbs06_space-other_T2w_labels-disc-manual.json} | 0 ....gz => sub-mpicbs06_space-other_T2w_labels-disc-manual.nii.gz} | 0 ...g-manual.json => sub-mpicbs06_space-other_T2w_seg-manual.json} | 0 ...nual.nii.gz => sub-mpicbs06_space-other_T2w_seg-manual.nii.gz} | 0 ... => sub-mpicbs07_flip-1_mt-on_space-other_MTS_seg-manual.json} | 0 ...> sub-mpicbs07_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} | 0 ...=> sub-mpicbs07_flip-2_mt-off_space-other_MTS_seg-manual.json} | 0 ... sub-mpicbs07_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} | 0 ....json => sub-mpicbs07_space-other_T1w_labels-disc-manual.json} | 0 ....gz => sub-mpicbs07_space-other_T1w_labels-disc-manual.nii.gz} | 0 ...g-manual.json => sub-mpicbs07_space-other_T1w_seg-manual.json} | 0 ...nual.nii.gz => sub-mpicbs07_space-other_T1w_seg-manual.nii.gz} | 0 ...anual.json => sub-mpicbs07_space-other_T2star_seg-manual.json} | 0 ...l.nii.gz => sub-mpicbs07_space-other_T2star_seg-manual.nii.gz} | 0 ....json => sub-mpicbs07_space-other_T2w_labels-disc-manual.json} | 0 ....gz => sub-mpicbs07_space-other_T2w_labels-disc-manual.nii.gz} | 0 ...g-manual.json => sub-mpicbs07_space-other_T2w_seg-manual.json} | 0 ...nual.nii.gz => sub-mpicbs07_space-other_T2w_seg-manual.nii.gz} | 0 ...=> sub-nottwil01_flip-1_mt-on_space-other_MTS_seg-manual.json} | 0 ... sub-nottwil01_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} | 0 ...> sub-nottwil01_flip-2_mt-off_space-other_MTS_seg-manual.json} | 0 ...sub-nottwil01_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} | 0 ...json => sub-nottwil01_space-other_T1w_labels-disc-manual.json} | 0 ...gz => sub-nottwil01_space-other_T1w_labels-disc-manual.nii.gz} | 0 ...-manual.json => sub-nottwil01_space-other_T1w_seg-manual.json} | 0 ...ual.nii.gz => sub-nottwil01_space-other_T1w_seg-manual.nii.gz} | 0 ...al.json => sub-nottwil01_space-other_T2star_gmseg-manual.json} | 0 ...ii.gz => sub-nottwil01_space-other_T2star_gmseg-manual.nii.gz} | 0 ...nual.json => sub-nottwil01_space-other_T2star_seg-manual.json} | 0 ....nii.gz => sub-nottwil01_space-other_T2star_seg-manual.nii.gz} | 0 ...nual.json => sub-nottwil01_space-other_T2w_csfseg-manual.json} | 0 ....nii.gz => sub-nottwil01_space-other_T2w_csfseg-manual.nii.gz} | 0 ...json => sub-nottwil01_space-other_T2w_labels-disc-manual.json} | 0 ...gz => sub-nottwil01_space-other_T2w_labels-disc-manual.nii.gz} | 0 ...-manual.json => sub-nottwil01_space-other_T2w_seg-manual.json} | 0 ...ual.nii.gz => sub-nottwil01_space-other_T2w_seg-manual.nii.gz} | 0 ...=> sub-nottwil02_flip-1_mt-on_space-other_MTS_seg-manual.json} | 0 ... sub-nottwil02_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} | 0 ...> sub-nottwil02_flip-2_mt-off_space-other_MTS_seg-manual.json} | 0 ...sub-nottwil02_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} | 0 ...json => sub-nottwil02_space-other_T1w_labels-disc-manual.json} | 0 ...gz => sub-nottwil02_space-other_T1w_labels-disc-manual.nii.gz} | 0 ...-manual.json => sub-nottwil02_space-other_T1w_seg-manual.json} | 0 ...ual.nii.gz => sub-nottwil02_space-other_T1w_seg-manual.nii.gz} | 0 ...nual.json => sub-nottwil02_space-other_T2star_seg-manual.json} | 0 ....nii.gz => sub-nottwil02_space-other_T2star_seg-manual.nii.gz} | 0 ...json => sub-nottwil02_space-other_T2w_labels-disc-manual.json} | 0 ...gz => sub-nottwil02_space-other_T2w_labels-disc-manual.nii.gz} | 0 ...-manual.json => sub-nottwil02_space-other_T2w_seg-manual.json} | 0 ...ual.nii.gz => sub-nottwil02_space-other_T2w_seg-manual.nii.gz} | 0 ...=> sub-nottwil03_flip-1_mt-on_space-other_MTS_seg-manual.json} | 0 ... sub-nottwil03_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} | 0 ...> sub-nottwil03_flip-2_mt-off_space-other_MTS_seg-manual.json} | 0 ...sub-nottwil03_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} | 0 ...json => sub-nottwil03_space-other_T1w_labels-disc-manual.json} | 0 ...gz => sub-nottwil03_space-other_T1w_labels-disc-manual.nii.gz} | 0 ...-manual.json => sub-nottwil03_space-other_T1w_seg-manual.json} | 0 ...ual.nii.gz => sub-nottwil03_space-other_T1w_seg-manual.nii.gz} | 0 ...al.json => sub-nottwil03_space-other_T2star_gmseg-manual.json} | 0 ...ii.gz => sub-nottwil03_space-other_T2star_gmseg-manual.nii.gz} | 0 ...nual.json => sub-nottwil03_space-other_T2star_seg-manual.json} | 0 ....nii.gz => sub-nottwil03_space-other_T2star_seg-manual.nii.gz} | 0 ...nual.json => sub-nottwil03_space-other_T2w_csfseg-manual.json} | 0 ....nii.gz => 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sub-oxfordFmrib07_space-other_T1w_RPI_r_labels-manual.nii.gz} | 0 ... => sub-oxfordFmrib07_space-other_T1w_labels-disc-manual.json} | 0 ...> sub-oxfordFmrib07_space-other_T1w_labels-disc-manual.nii.gz} | 0 ...ual.json => sub-oxfordFmrib07_space-other_T1w_seg-manual.json} | 0 ...nii.gz => sub-oxfordFmrib07_space-other_T1w_seg-manual.nii.gz} | 0 ....json => sub-oxfordFmrib07_space-other_T2star_seg-manual.json} | 0 ....gz => sub-oxfordFmrib07_space-other_T2star_seg-manual.nii.gz} | 0 ... => sub-oxfordFmrib07_space-other_T2w_labels-disc-manual.json} | 0 ...> sub-oxfordFmrib07_space-other_T2w_labels-disc-manual.nii.gz} | 0 ...ual.json => sub-oxfordFmrib07_space-other_T2w_seg-manual.json} | 0 ...nii.gz => sub-oxfordFmrib07_space-other_T2w_seg-manual.nii.gz} | 0 ...ub-oxfordFmrib08_flip-1_mt-on_space-other_MTS_seg-manual.json} | 0 ...-oxfordFmrib08_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} | 0 ...b-oxfordFmrib08_flip-2_mt-off_space-other_MTS_seg-manual.json} | 0 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sub-vuiisIngenia01_space-other_T2w_seg-manual.json} | 0 ...ii.gz => sub-vuiisIngenia01_space-other_T2w_seg-manual.nii.gz} | 0 ...b-vuiisIngenia02_flip-1_mt-on_space-other_MTS_seg-manual.json} | 0 ...vuiisIngenia02_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} | 0 ...-vuiisIngenia02_flip-2_mt-off_space-other_MTS_seg-manual.json} | 0 ...uiisIngenia02_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} | 0 ...=> sub-vuiisIngenia02_space-other_T1w_labels-disc-manual.json} | 0 ... sub-vuiisIngenia02_space-other_T1w_labels-disc-manual.nii.gz} | 0 ...al.json => sub-vuiisIngenia02_space-other_T1w_seg-manual.json} | 0 ...ii.gz => sub-vuiisIngenia02_space-other_T1w_seg-manual.nii.gz} | 0 ...json => sub-vuiisIngenia02_space-other_T2star_seg-manual.json} | 0 ...gz => sub-vuiisIngenia02_space-other_T2star_seg-manual.nii.gz} | 0 ...=> sub-vuiisIngenia02_space-other_T2w_labels-disc-manual.json} | 0 ... sub-vuiisIngenia02_space-other_T2w_labels-disc-manual.nii.gz} | 0 ...al.json => sub-vuiisIngenia02_space-other_T2w_seg-manual.json} | 0 ...ii.gz => sub-vuiisIngenia02_space-other_T2w_seg-manual.nii.gz} | 0 ...b-vuiisIngenia03_flip-1_mt-on_space-other_MTS_seg-manual.json} | 0 ...vuiisIngenia03_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} | 0 ...-vuiisIngenia03_flip-2_mt-off_space-other_MTS_seg-manual.json} | 0 ...uiisIngenia03_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} | 0 ...=> sub-vuiisIngenia03_space-other_T1w_labels-disc-manual.json} | 0 ... sub-vuiisIngenia03_space-other_T1w_labels-disc-manual.nii.gz} | 0 ...al.json => sub-vuiisIngenia03_space-other_T1w_seg-manual.json} | 0 ...ii.gz => sub-vuiisIngenia03_space-other_T1w_seg-manual.nii.gz} | 0 ...on => sub-vuiisIngenia03_space-other_T2star_gmseg-manual.json} | 0 ... => sub-vuiisIngenia03_space-other_T2star_gmseg-manual.nii.gz} | 0 ...json => sub-vuiisIngenia03_space-other_T2star_seg-manual.json} | 0 ...gz => sub-vuiisIngenia03_space-other_T2star_seg-manual.nii.gz} | 0 ...=> sub-vuiisIngenia03_space-other_T2w_labels-disc-manual.json} | 0 ... sub-vuiisIngenia03_space-other_T2w_labels-disc-manual.nii.gz} | 0 ...al.json => sub-vuiisIngenia03_space-other_T2w_seg-manual.json} | 0 ...ii.gz => sub-vuiisIngenia03_space-other_T2w_seg-manual.nii.gz} | 0 ...b-vuiisIngenia04_flip-1_mt-on_space-other_MTS_seg-manual.json} | 0 ...vuiisIngenia04_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} | 0 ...-vuiisIngenia04_flip-2_mt-off_space-other_MTS_seg-manual.json} | 0 ...uiisIngenia04_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} | 0 ...=> sub-vuiisIngenia04_space-other_T1w_labels-disc-manual.json} | 0 ... sub-vuiisIngenia04_space-other_T1w_labels-disc-manual.nii.gz} | 0 ...al.json => sub-vuiisIngenia04_space-other_T1w_seg-manual.json} | 0 ...ii.gz => sub-vuiisIngenia04_space-other_T1w_seg-manual.nii.gz} | 0 ...json => sub-vuiisIngenia04_space-other_T2star_seg-manual.json} | 0 ...gz => sub-vuiisIngenia04_space-other_T2star_seg-manual.nii.gz} | 0 ...=> sub-vuiisIngenia04_space-other_T2w_labels-disc-manual.json} | 0 ... sub-vuiisIngenia04_space-other_T2w_labels-disc-manual.nii.gz} | 0 ...al.json => sub-vuiisIngenia04_space-other_T2w_seg-manual.json} | 0 ...ii.gz => sub-vuiisIngenia04_space-other_T2w_seg-manual.nii.gz} | 0 ...b-vuiisIngenia05_flip-1_mt-on_space-other_MTS_seg-manual.json} | 0 ...vuiisIngenia05_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} | 0 ...-vuiisIngenia05_flip-2_mt-off_space-other_MTS_seg-manual.json} | 0 ...uiisIngenia05_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} | 0 ...sub-vuiisIngenia05_space-other_T1w_RPI_r_labels-manual.nii.gz} | 0 ...=> sub-vuiisIngenia05_space-other_T1w_labels-disc-manual.json} | 0 ... sub-vuiisIngenia05_space-other_T1w_labels-disc-manual.nii.gz} | 0 ...al.json => sub-vuiisIngenia05_space-other_T1w_seg-manual.json} | 0 ...ii.gz => sub-vuiisIngenia05_space-other_T1w_seg-manual.nii.gz} | 0 ...json => sub-vuiisIngenia05_space-other_T2star_seg-manual.json} | 0 ...gz => sub-vuiisIngenia05_space-other_T2star_seg-manual.nii.gz} | 0 ...=> sub-vuiisIngenia05_space-other_T2w_labels-disc-manual.json} | 0 ... sub-vuiisIngenia05_space-other_T2w_labels-disc-manual.nii.gz} | 0 ...al.json => sub-vuiisIngenia05_space-other_T2w_seg-manual.json} | 0 ...ii.gz => sub-vuiisIngenia05_space-other_T2w_seg-manual.nii.gz} | 0 ...b-vuiisIngenia06_flip-1_mt-on_space-other_MTS_seg-manual.json} | 0 ...vuiisIngenia06_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} | 0 ...-vuiisIngenia06_flip-2_mt-off_space-other_MTS_seg-manual.json} | 0 ...uiisIngenia06_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} | 0 ...=> sub-vuiisIngenia06_space-other_T1w_labels-disc-manual.json} | 0 ... sub-vuiisIngenia06_space-other_T1w_labels-disc-manual.nii.gz} | 0 ...al.json => sub-vuiisIngenia06_space-other_T1w_seg-manual.json} | 0 ...ii.gz => sub-vuiisIngenia06_space-other_T1w_seg-manual.nii.gz} | 0 ...json => sub-vuiisIngenia06_space-other_T2star_seg-manual.json} | 0 ...gz => sub-vuiisIngenia06_space-other_T2star_seg-manual.nii.gz} | 0 ...=> sub-vuiisIngenia06_space-other_T2w_labels-disc-manual.json} | 0 ... sub-vuiisIngenia06_space-other_T2w_labels-disc-manual.nii.gz} | 0 ...al.json => sub-vuiisIngenia06_space-other_T2w_seg-manual.json} | 0 ...ii.gz => sub-vuiisIngenia06_space-other_T2w_seg-manual.nii.gz} | 0 ...g.json => sub-amu01_flip-1_mt-on_space-other_MTS_softseg.json} | 0 ...i.gz => sub-amu01_flip-1_mt-on_space-other_MTS_softseg.nii.gz} | 0 ....json => sub-amu01_flip-2_mt-off_space-other_MTS_softseg.json} | 0 ....gz => sub-amu01_flip-2_mt-off_space-other_MTS_softseg.nii.gz} | 0 ...01_T2w_softseg.json => sub-amu01_space-other_T1w_softseg.json} | 0 ...1w_softseg.nii.gz => sub-amu01_space-other_T1w_softseg.nii.gz} | 0 ...MTS_softseg.json => sub-amu01_space-other_T2star_softseg.json} | 0 ...softseg.nii.gz => sub-amu01_space-other_T2star_softseg.nii.gz} | 0 ...ff_MTS_softseg.json => sub-amu01_space-other_T2w_softseg.json} | 0 ...2w_softseg.nii.gz => sub-amu01_space-other_T2w_softseg.nii.gz} | 0 ...g.json => sub-amu02_flip-1_mt-on_space-other_MTS_softseg.json} | 0 ...i.gz => sub-amu02_flip-1_mt-on_space-other_MTS_softseg.nii.gz} | 0 ....json => sub-amu02_flip-2_mt-off_space-other_MTS_softseg.json} | 0 ....gz => sub-amu02_flip-2_mt-off_space-other_MTS_softseg.nii.gz} | 0 ...02_T2w_softseg.json => sub-amu02_space-other_T1w_softseg.json} | 0 ...1w_softseg.nii.gz => sub-amu02_space-other_T1w_softseg.nii.gz} | 0 ...MTS_softseg.json => sub-amu02_space-other_T2star_softseg.json} | 0 ...softseg.nii.gz => sub-amu02_space-other_T2star_softseg.nii.gz} | 0 ...ff_MTS_softseg.json => sub-amu02_space-other_T2w_softseg.json} | 0 ...2w_softseg.nii.gz => sub-amu02_space-other_T2w_softseg.nii.gz} | 0 ...g.json => sub-amu03_flip-1_mt-on_space-other_MTS_softseg.json} | 0 ...i.gz => sub-amu03_flip-1_mt-on_space-other_MTS_softseg.nii.gz} | 0 ....json => sub-amu03_flip-2_mt-off_space-other_MTS_softseg.json} | 0 ....gz => sub-amu03_flip-2_mt-off_space-other_MTS_softseg.nii.gz} | 0 ...03_T2w_softseg.json => sub-amu03_space-other_T1w_softseg.json} | 0 ...1w_softseg.nii.gz => sub-amu03_space-other_T1w_softseg.nii.gz} | 0 ...MTS_softseg.json => sub-amu03_space-other_T2star_softseg.json} | 0 ...softseg.nii.gz => sub-amu03_space-other_T2star_softseg.nii.gz} | 0 ...ff_MTS_softseg.json => sub-amu03_space-other_T2w_softseg.json} | 0 ...2w_softseg.nii.gz => sub-amu03_space-other_T2w_softseg.nii.gz} | 0 ...g.json => sub-amu04_flip-1_mt-on_space-other_MTS_softseg.json} | 0 ...i.gz => sub-amu04_flip-1_mt-on_space-other_MTS_softseg.nii.gz} | 0 ....json => sub-amu04_flip-2_mt-off_space-other_MTS_softseg.json} | 0 ....gz => sub-amu04_flip-2_mt-off_space-other_MTS_softseg.nii.gz} | 0 ...on_MTS_softseg.json => sub-amu04_space-other_T1w_softseg.json} | 0 ...1w_softseg.nii.gz => sub-amu04_space-other_T1w_softseg.nii.gz} | 0 ...MTS_softseg.json => sub-amu04_space-other_T2star_softseg.json} | 0 ...softseg.nii.gz => sub-amu04_space-other_T2star_softseg.nii.gz} | 0 ...04_T2w_softseg.json => sub-amu04_space-other_T2w_softseg.json} | 0 ...2w_softseg.nii.gz => sub-amu04_space-other_T2w_softseg.nii.gz} | 0 ...g.json => sub-amu05_flip-1_mt-on_space-other_MTS_softseg.json} | 0 ...i.gz => sub-amu05_flip-1_mt-on_space-other_MTS_softseg.nii.gz} | 0 ....json => sub-amu05_flip-2_mt-off_space-other_MTS_softseg.json} | 0 ....gz => sub-amu05_flip-2_mt-off_space-other_MTS_softseg.nii.gz} | 0 ...05_T2w_softseg.json => sub-amu05_space-other_T1w_softseg.json} | 0 ...1w_softseg.nii.gz => sub-amu05_space-other_T1w_softseg.nii.gz} | 0 ...MTS_softseg.json => sub-amu05_space-other_T2star_softseg.json} | 0 ...softseg.nii.gz => sub-amu05_space-other_T2star_softseg.nii.gz} | 0 ...ff_MTS_softseg.json => sub-amu05_space-other_T2w_softseg.json} | 0 ...2w_softseg.nii.gz => sub-amu05_space-other_T2w_softseg.nii.gz} | 0 ...n => sub-balgrist01_flip-1_mt-on_space-other_MTS_softseg.json} | 0 ...=> sub-balgrist01_flip-1_mt-on_space-other_MTS_softseg.nii.gz} | 0 ... => sub-balgrist01_flip-2_mt-off_space-other_MTS_softseg.json} | 0 ...> sub-balgrist01_flip-2_mt-off_space-other_MTS_softseg.nii.gz} | 0 ...w_softseg.json => sub-balgrist01_space-other_T1w_softseg.json} | 0 ...ftseg.nii.gz => sub-balgrist01_space-other_T1w_softseg.nii.gz} | 0 ...oftseg.json => sub-balgrist01_space-other_T2star_softseg.json} | 0 ...eg.nii.gz => sub-balgrist01_space-other_T2star_softseg.nii.gz} | 0 ...S_softseg.json => sub-balgrist01_space-other_T2w_softseg.json} | 0 ...ftseg.nii.gz => sub-balgrist01_space-other_T2w_softseg.nii.gz} | 0 ..._MTS.json => sub-balgrist02_flip-1_mt-on_space-other_MTS.json} | 0 ....nii.gz => sub-balgrist02_flip-1_mt-on_space-other_MTS.nii.gz} | 0 ...n => sub-balgrist02_flip-1_mt-on_space-other_MTS_softseg.json} | 0 ...=> sub-balgrist02_flip-1_mt-on_space-other_MTS_softseg.nii.gz} | 0 ... => sub-balgrist02_flip-2_mt-off_space-other_MTS_softseg.json} | 0 ...> sub-balgrist02_flip-2_mt-off_space-other_MTS_softseg.nii.gz} | 0 ...w_softseg.json => sub-balgrist02_space-other_T1w_softseg.json} | 0 ...ftseg.nii.gz => sub-balgrist02_space-other_T1w_softseg.nii.gz} | 0 ...oftseg.json => sub-balgrist02_space-other_T2star_softseg.json} | 0 ...eg.nii.gz => sub-balgrist02_space-other_T2star_softseg.nii.gz} | 0 ...S_softseg.json => sub-balgrist02_space-other_T2w_softseg.json} | 0 ...ftseg.nii.gz => sub-balgrist02_space-other_T2w_softseg.nii.gz} | 0 ...n => sub-balgrist03_flip-1_mt-on_space-other_MTS_softseg.json} | 0 ...=> sub-balgrist03_flip-1_mt-on_space-other_MTS_softseg.nii.gz} | 0 ... => sub-balgrist03_flip-2_mt-off_space-other_MTS_softseg.json} | 0 ...> sub-balgrist03_flip-2_mt-off_space-other_MTS_softseg.nii.gz} | 0 ...S_softseg.json => sub-balgrist03_space-other_T1w_softseg.json} | 0 ...ftseg.nii.gz => sub-balgrist03_space-other_T1w_softseg.nii.gz} | 0 ...oftseg.json => sub-balgrist03_space-other_T2star_softseg.json} | 0 ...eg.nii.gz => sub-balgrist03_space-other_T2star_softseg.nii.gz} | 0 ...w_softseg.json => sub-balgrist03_space-other_T2w_softseg.json} | 0 ...ftseg.nii.gz => sub-balgrist03_space-other_T2w_softseg.nii.gz} | 0 ...n => sub-balgrist04_flip-1_mt-on_space-other_MTS_softseg.json} | 0 ...=> sub-balgrist04_flip-1_mt-on_space-other_MTS_softseg.nii.gz} | 0 ... => sub-balgrist04_flip-2_mt-off_space-other_MTS_softseg.json} | 0 ...> sub-balgrist04_flip-2_mt-off_space-other_MTS_softseg.nii.gz} | 0 ...w_softseg.json => sub-balgrist04_space-other_T1w_softseg.json} | 0 ...ftseg.nii.gz => sub-balgrist04_space-other_T1w_softseg.nii.gz} | 0 ...oftseg.json => sub-balgrist04_space-other_T2star_softseg.json} | 0 ...eg.nii.gz => sub-balgrist04_space-other_T2star_softseg.nii.gz} | 0 ...S_softseg.json => sub-balgrist04_space-other_T2w_softseg.json} | 0 ...ftseg.nii.gz => sub-balgrist04_space-other_T2w_softseg.nii.gz} | 0 ...n => sub-balgrist05_flip-1_mt-on_space-other_MTS_softseg.json} | 0 ...=> sub-balgrist05_flip-1_mt-on_space-other_MTS_softseg.nii.gz} | 0 ... => sub-balgrist05_flip-2_mt-off_space-other_MTS_softseg.json} | 0 ...> sub-balgrist05_flip-2_mt-off_space-other_MTS_softseg.nii.gz} | 0 ...w_softseg.json => sub-balgrist05_space-other_T1w_softseg.json} | 0 ...ftseg.nii.gz => sub-balgrist05_space-other_T1w_softseg.nii.gz} | 0 ...oftseg.json => sub-balgrist05_space-other_T2star_softseg.json} | 0 ...eg.nii.gz => sub-balgrist05_space-other_T2star_softseg.nii.gz} | 0 ...S_softseg.json => sub-balgrist05_space-other_T2w_softseg.json} | 0 ...ftseg.nii.gz => sub-balgrist05_space-other_T2w_softseg.nii.gz} | 0 ...n => sub-balgrist06_flip-1_mt-on_space-other_MTS_softseg.json} | 0 ...=> sub-balgrist06_flip-1_mt-on_space-other_MTS_softseg.nii.gz} | 0 ... => sub-balgrist06_flip-2_mt-off_space-other_MTS_softseg.json} | 0 ...> sub-balgrist06_flip-2_mt-off_space-other_MTS_softseg.nii.gz} | 0 ...w_softseg.json => sub-balgrist06_space-other_T1w_softseg.json} | 0 ...ftseg.nii.gz => sub-balgrist06_space-other_T1w_softseg.nii.gz} | 0 ...oftseg.json => sub-balgrist06_space-other_T2star_softseg.json} | 0 ...eg.nii.gz => sub-balgrist06_space-other_T2star_softseg.nii.gz} | 0 ...S_softseg.json => sub-balgrist06_space-other_T2w_softseg.json} | 0 ...ftseg.nii.gz => sub-balgrist06_space-other_T2w_softseg.nii.gz} | 0 ... => sub-barcelona01_flip-1_mt-on_space-other_MTS_softseg.json} | 0 ...> sub-barcelona01_flip-1_mt-on_space-other_MTS_softseg.nii.gz} | 0 ...=> sub-barcelona01_flip-2_mt-off_space-other_MTS_softseg.json} | 0 ... sub-barcelona01_flip-2_mt-off_space-other_MTS_softseg.nii.gz} | 0 ..._softseg.json => sub-barcelona01_space-other_T1w_softseg.json} | 0 ...tseg.nii.gz => sub-barcelona01_space-other_T1w_softseg.nii.gz} | 0 ...ftseg.json => sub-barcelona01_space-other_T2star_softseg.json} | 0 ...g.nii.gz => sub-barcelona01_space-other_T2star_softseg.nii.gz} | 0 ..._softseg.json => sub-barcelona01_space-other_T2w_softseg.json} | 0 ...tseg.nii.gz => sub-barcelona01_space-other_T2w_softseg.nii.gz} | 0 ...MTS.json => sub-barcelona02_flip-1_mt-on_space-other_MTS.json} | 0 ...nii.gz => sub-barcelona02_flip-1_mt-on_space-other_MTS.nii.gz} | 0 ... => sub-barcelona02_flip-1_mt-on_space-other_MTS_softseg.json} | 0 ...> sub-barcelona02_flip-1_mt-on_space-other_MTS_softseg.nii.gz} | 0 ...=> sub-barcelona02_flip-2_mt-off_space-other_MTS_softseg.json} | 0 ... sub-barcelona02_flip-2_mt-off_space-other_MTS_softseg.nii.gz} | 0 ..._softseg.json => sub-barcelona02_space-other_T1w_softseg.json} | 0 ...tseg.nii.gz => sub-barcelona02_space-other_T1w_softseg.nii.gz} | 0 ...ftseg.json => sub-barcelona02_space-other_T2star_softseg.json} | 0 ...g.nii.gz => sub-barcelona02_space-other_T2star_softseg.nii.gz} | 0 ...-barcelona02_T2w.json => sub-barcelona02_space-other_T2w.json} | 0 ...celona02_T2w.nii.gz => sub-barcelona02_space-other_T2w.nii.gz} | 0 ..._softseg.json => sub-barcelona02_space-other_T2w_softseg.json} | 0 ...tseg.nii.gz => sub-barcelona02_space-other_T2w_softseg.nii.gz} | 0 ... => sub-barcelona03_flip-1_mt-on_space-other_MTS_softseg.json} | 0 ...> sub-barcelona03_flip-1_mt-on_space-other_MTS_softseg.nii.gz} | 0 ...=> sub-barcelona03_flip-2_mt-off_space-other_MTS_softseg.json} | 0 ... sub-barcelona03_flip-2_mt-off_space-other_MTS_softseg.nii.gz} | 0 ..._softseg.json => sub-barcelona03_space-other_T1w_softseg.json} | 0 ...tseg.nii.gz => sub-barcelona03_space-other_T1w_softseg.nii.gz} | 0 ...ftseg.json => sub-barcelona03_space-other_T2star_softseg.json} | 0 ...g.nii.gz => sub-barcelona03_space-other_T2star_softseg.nii.gz} | 0 ..._softseg.json => sub-barcelona03_space-other_T2w_softseg.json} | 0 ...tseg.nii.gz => sub-barcelona03_space-other_T2w_softseg.nii.gz} | 0 ... => sub-barcelona04_flip-1_mt-on_space-other_MTS_softseg.json} | 0 ...> sub-barcelona04_flip-1_mt-on_space-other_MTS_softseg.nii.gz} | 0 ...=> sub-barcelona04_flip-2_mt-off_space-other_MTS_softseg.json} | 0 ... sub-barcelona04_flip-2_mt-off_space-other_MTS_softseg.nii.gz} | 0 ..._softseg.json => sub-barcelona04_space-other_T1w_softseg.json} | 0 ...tseg.nii.gz => sub-barcelona04_space-other_T1w_softseg.nii.gz} | 0 ...ftseg.json => sub-barcelona04_space-other_T2star_softseg.json} | 0 ...g.nii.gz => sub-barcelona04_space-other_T2star_softseg.nii.gz} | 0 ..._softseg.json => sub-barcelona04_space-other_T2w_softseg.json} | 0 ...tseg.nii.gz => sub-barcelona04_space-other_T2w_softseg.nii.gz} | 0 ... => sub-barcelona05_flip-1_mt-on_space-other_MTS_softseg.json} | 0 ...> sub-barcelona05_flip-1_mt-on_space-other_MTS_softseg.nii.gz} | 0 ...=> sub-barcelona05_flip-2_mt-off_space-other_MTS_softseg.json} | 0 ... sub-barcelona05_flip-2_mt-off_space-other_MTS_softseg.nii.gz} | 0 ..._softseg.json => sub-barcelona05_space-other_T1w_softseg.json} | 0 ...tseg.nii.gz => sub-barcelona05_space-other_T1w_softseg.nii.gz} | 0 ...ftseg.json => sub-barcelona05_space-other_T2star_softseg.json} | 0 ...g.nii.gz => sub-barcelona05_space-other_T2star_softseg.nii.gz} | 0 ..._softseg.json => sub-barcelona05_space-other_T2w_softseg.json} | 0 ...tseg.nii.gz => sub-barcelona05_space-other_T2w_softseg.nii.gz} | 0 ... => sub-barcelona06_flip-1_mt-on_space-other_MTS_softseg.json} | 0 ...> sub-barcelona06_flip-1_mt-on_space-other_MTS_softseg.nii.gz} | 0 ...=> sub-barcelona06_flip-2_mt-off_space-other_MTS_softseg.json} | 0 ... sub-barcelona06_flip-2_mt-off_space-other_MTS_softseg.nii.gz} | 0 ..._softseg.json => sub-barcelona06_space-other_T1w_softseg.json} | 0 ...tseg.nii.gz => sub-barcelona06_space-other_T1w_softseg.nii.gz} | 0 ...ftseg.json => sub-barcelona06_space-other_T2star_softseg.json} | 0 ...g.nii.gz => sub-barcelona06_space-other_T2star_softseg.nii.gz} | 0 ..._softseg.json => sub-barcelona06_space-other_T2w_softseg.json} | 0 ...tseg.nii.gz => sub-barcelona06_space-other_T2w_softseg.nii.gz} | 0 ..._softseg.json => sub-beijingGE01_space-other_T1w_softseg.json} | 0 ...tseg.nii.gz => sub-beijingGE01_space-other_T1w_softseg.nii.gz} | 0 ...ftseg.json => sub-beijingGE01_space-other_T2star_softseg.json} | 0 ...g.nii.gz => sub-beijingGE01_space-other_T2star_softseg.nii.gz} | 0 ..._softseg.json => sub-beijingGE01_space-other_T2w_softseg.json} | 0 ...tseg.nii.gz => sub-beijingGE01_space-other_T2w_softseg.nii.gz} | 0 ..._softseg.json => sub-beijingGE02_space-other_T1w_softseg.json} | 0 ...tseg.nii.gz => sub-beijingGE02_space-other_T1w_softseg.nii.gz} | 0 ...ftseg.json => sub-beijingGE02_space-other_T2star_softseg.json} | 0 ...g.nii.gz => sub-beijingGE02_space-other_T2star_softseg.nii.gz} | 0 ..._softseg.json => sub-beijingGE02_space-other_T2w_softseg.json} | 0 ...tseg.nii.gz => sub-beijingGE02_space-other_T2w_softseg.nii.gz} | 0 ..._softseg.json => sub-beijingGE03_space-other_T1w_softseg.json} | 0 ...tseg.nii.gz => sub-beijingGE03_space-other_T1w_softseg.nii.gz} | 0 ...ftseg.json => sub-beijingGE03_space-other_T2star_softseg.json} | 0 ...g.nii.gz => sub-beijingGE03_space-other_T2star_softseg.nii.gz} | 0 ..._softseg.json => sub-beijingGE03_space-other_T2w_softseg.json} | 0 ...tseg.nii.gz => sub-beijingGE03_space-other_T2w_softseg.nii.gz} | 0 ..._softseg.json => sub-beijingGE04_space-other_T1w_softseg.json} | 0 ...tseg.nii.gz => sub-beijingGE04_space-other_T1w_softseg.nii.gz} | 0 ...ftseg.json => sub-beijingGE04_space-other_T2star_softseg.json} | 0 ...g.nii.gz => sub-beijingGE04_space-other_T2star_softseg.nii.gz} | 0 ..._softseg.json => sub-beijingGE04_space-other_T2w_softseg.json} | 0 ...tseg.nii.gz => sub-beijingGE04_space-other_T2w_softseg.nii.gz} | 0 ...sub-beijingPrisma01_flip-1_mt-on_space-other_MTS_softseg.json} | 0 ...b-beijingPrisma01_flip-1_mt-on_space-other_MTS_softseg.nii.gz} | 0 ...ub-beijingPrisma01_flip-2_mt-off_space-other_MTS_softseg.json} | 0 ...-beijingPrisma01_flip-2_mt-off_space-other_MTS_softseg.nii.gz} | 0 ...tseg.json => sub-beijingPrisma01_space-other_T1w_softseg.json} | 0 ....nii.gz => sub-beijingPrisma01_space-other_T1w_softseg.nii.gz} | 0 ...g.json => sub-beijingPrisma01_space-other_T2star_softseg.json} | 0 ...i.gz => sub-beijingPrisma01_space-other_T2star_softseg.nii.gz} | 0 ...tseg.json => sub-beijingPrisma01_space-other_T2w_softseg.json} | 0 ....nii.gz => sub-beijingPrisma01_space-other_T2w_softseg.nii.gz} | 0 ...sub-beijingPrisma02_flip-1_mt-on_space-other_MTS_softseg.json} | 0 ...b-beijingPrisma02_flip-1_mt-on_space-other_MTS_softseg.nii.gz} | 0 ...ub-beijingPrisma02_flip-2_mt-off_space-other_MTS_softseg.json} | 0 ...-beijingPrisma02_flip-2_mt-off_space-other_MTS_softseg.nii.gz} | 0 ...tseg.json => sub-beijingPrisma02_space-other_T1w_softseg.json} | 0 ....nii.gz => sub-beijingPrisma02_space-other_T1w_softseg.nii.gz} | 0 ...g.json => sub-beijingPrisma02_space-other_T2star_softseg.json} | 0 ...i.gz => sub-beijingPrisma02_space-other_T2star_softseg.nii.gz} | 0 ...tseg.json => sub-beijingPrisma02_space-other_T2w_softseg.json} | 0 ....nii.gz => sub-beijingPrisma02_space-other_T2w_softseg.nii.gz} | 0 ...sub-beijingPrisma03_flip-1_mt-on_space-other_MTS_softseg.json} | 0 ...b-beijingPrisma03_flip-1_mt-on_space-other_MTS_softseg.nii.gz} | 0 ...ub-beijingPrisma03_flip-2_mt-off_space-other_MTS_softseg.json} | 0 ...-beijingPrisma03_flip-2_mt-off_space-other_MTS_softseg.nii.gz} | 0 ...tseg.json => sub-beijingPrisma03_space-other_T1w_softseg.json} | 0 ....nii.gz => sub-beijingPrisma03_space-other_T1w_softseg.nii.gz} | 0 ...g.json => sub-beijingPrisma03_space-other_T2star_softseg.json} | 0 ...i.gz => sub-beijingPrisma03_space-other_T2star_softseg.nii.gz} | 0 ...tseg.json => sub-beijingPrisma03_space-other_T2w_softseg.json} | 0 ....nii.gz => sub-beijingPrisma03_space-other_T2w_softseg.nii.gz} | 0 ...sub-beijingPrisma04_flip-1_mt-on_space-other_MTS_softseg.json} | 0 ...b-beijingPrisma04_flip-1_mt-on_space-other_MTS_softseg.nii.gz} | 0 ...ub-beijingPrisma04_flip-2_mt-off_space-other_MTS_softseg.json} | 0 ...-beijingPrisma04_flip-2_mt-off_space-other_MTS_softseg.nii.gz} | 0 ...tseg.json => sub-beijingPrisma04_space-other_T1w_softseg.json} | 0 ....nii.gz => sub-beijingPrisma04_space-other_T1w_softseg.nii.gz} | 0 ...g.json => sub-beijingPrisma04_space-other_T2star_softseg.json} | 0 ...i.gz => sub-beijingPrisma04_space-other_T2star_softseg.nii.gz} | 0 ...tseg.json => sub-beijingPrisma04_space-other_T2w_softseg.json} | 0 ....nii.gz => sub-beijingPrisma04_space-other_T2w_softseg.nii.gz} | 0 ...sub-beijingPrisma05_flip-1_mt-on_space-other_MTS_softseg.json} | 0 ...b-beijingPrisma05_flip-1_mt-on_space-other_MTS_softseg.nii.gz} | 0 ...ub-beijingPrisma05_flip-2_mt-off_space-other_MTS_softseg.json} | 0 ...-beijingPrisma05_flip-2_mt-off_space-other_MTS_softseg.nii.gz} | 0 ...tseg.json => sub-beijingPrisma05_space-other_T1w_softseg.json} | 0 ....nii.gz => sub-beijingPrisma05_space-other_T1w_softseg.nii.gz} | 0 ...g.json => sub-beijingPrisma05_space-other_T2star_softseg.json} | 0 ...i.gz => sub-beijingPrisma05_space-other_T2star_softseg.nii.gz} | 0 ...tseg.json => sub-beijingPrisma05_space-other_T2w_softseg.json} | 0 ....nii.gz => sub-beijingPrisma05_space-other_T2w_softseg.nii.gz} | 0 ...ftseg.json => sub-beijingVerio01_space-other_T1w_softseg.json} | 0 ...g.nii.gz => sub-beijingVerio01_space-other_T1w_softseg.nii.gz} | 0 ...eg.json => sub-beijingVerio01_space-other_T2star_softseg.json} | 0 ...ii.gz => sub-beijingVerio01_space-other_T2star_softseg.nii.gz} | 0 ...ftseg.json => sub-beijingVerio01_space-other_T2w_softseg.json} | 0 ...g.nii.gz => sub-beijingVerio01_space-other_T2w_softseg.nii.gz} | 0 ...ftseg.json => sub-beijingVerio02_space-other_T1w_softseg.json} | 0 ...g.nii.gz => sub-beijingVerio02_space-other_T1w_softseg.nii.gz} | 0 ...eg.json => sub-beijingVerio02_space-other_T2star_softseg.json} | 0 ...ii.gz => sub-beijingVerio02_space-other_T2star_softseg.nii.gz} | 0 ...ftseg.json => sub-beijingVerio02_space-other_T2w_softseg.json} | 0 ...g.nii.gz => sub-beijingVerio02_space-other_T2w_softseg.nii.gz} | 0 ...ftseg.json => sub-beijingVerio03_space-other_T1w_softseg.json} | 0 ...g.nii.gz => sub-beijingVerio03_space-other_T1w_softseg.nii.gz} | 0 ...eg.json => sub-beijingVerio03_space-other_T2star_softseg.json} | 0 ...ii.gz => sub-beijingVerio03_space-other_T2star_softseg.nii.gz} | 0 ...ftseg.json => sub-beijingVerio03_space-other_T2w_softseg.json} | 0 ...g.nii.gz => sub-beijingVerio03_space-other_T2w_softseg.nii.gz} | 0 ...ftseg.json => sub-beijingVerio04_space-other_T1w_softseg.json} | 0 ...g.nii.gz => sub-beijingVerio04_space-other_T1w_softseg.nii.gz} | 0 ...eg.json => sub-beijingVerio04_space-other_T2star_softseg.json} | 0 ...ii.gz => sub-beijingVerio04_space-other_T2star_softseg.nii.gz} | 0 ...ftseg.json => sub-beijingVerio04_space-other_T2w_softseg.json} | 0 ...g.nii.gz => sub-beijingVerio04_space-other_T2w_softseg.nii.gz} | 0 ...=> sub-brnoCeitec01_flip-1_mt-on_space-other_MTS_softseg.json} | 0 ... sub-brnoCeitec01_flip-1_mt-on_space-other_MTS_softseg.nii.gz} | 0 ...> sub-brnoCeitec01_flip-2_mt-off_space-other_MTS_softseg.json} | 0 ...sub-brnoCeitec01_flip-2_mt-off_space-other_MTS_softseg.nii.gz} | 0 ...rnoCeitec01_T1w.json => sub-brnoCeitec01_space-other_T1w.json} | 0 ...eitec01_T1w.nii.gz => sub-brnoCeitec01_space-other_T1w.nii.gz} | 0 ...softseg.json => sub-brnoCeitec01_space-other_T1w_softseg.json} | 0 ...seg.nii.gz => sub-brnoCeitec01_space-other_T1w_softseg.nii.gz} | 0 ...tseg.json => sub-brnoCeitec01_space-other_T2star_softseg.json} | 0 ....nii.gz => sub-brnoCeitec01_space-other_T2star_softseg.nii.gz} | 0 ...softseg.json => sub-brnoCeitec01_space-other_T2w_softseg.json} | 0 ...seg.nii.gz => sub-brnoCeitec01_space-other_T2w_softseg.nii.gz} | 0 ...=> sub-brnoCeitec02_flip-1_mt-on_space-other_MTS_softseg.json} | 0 ... sub-brnoCeitec02_flip-1_mt-on_space-other_MTS_softseg.nii.gz} | 0 ...> sub-brnoCeitec02_flip-2_mt-off_space-other_MTS_softseg.json} | 0 ...sub-brnoCeitec02_flip-2_mt-off_space-other_MTS_softseg.nii.gz} | 0 ...softseg.json => sub-brnoCeitec02_space-other_T1w_softseg.json} | 0 ...seg.nii.gz => sub-brnoCeitec02_space-other_T1w_softseg.nii.gz} | 0 ...tseg.json => sub-brnoCeitec02_space-other_T2star_softseg.json} | 0 ....nii.gz => sub-brnoCeitec02_space-other_T2star_softseg.nii.gz} | 0 ...softseg.json => sub-brnoCeitec02_space-other_T2w_softseg.json} | 0 ...seg.nii.gz => sub-brnoCeitec02_space-other_T2w_softseg.nii.gz} | 0 ...=> sub-brnoCeitec03_flip-1_mt-on_space-other_MTS_softseg.json} | 0 ... sub-brnoCeitec03_flip-1_mt-on_space-other_MTS_softseg.nii.gz} | 0 ...> sub-brnoCeitec03_flip-2_mt-off_space-other_MTS_softseg.json} | 0 ...sub-brnoCeitec03_flip-2_mt-off_space-other_MTS_softseg.nii.gz} | 0 ...softseg.json => sub-brnoCeitec03_space-other_T1w_softseg.json} | 0 ...seg.nii.gz => sub-brnoCeitec03_space-other_T1w_softseg.nii.gz} | 0 ...tseg.json => sub-brnoCeitec03_space-other_T2star_softseg.json} | 0 ....nii.gz => sub-brnoCeitec03_space-other_T2star_softseg.nii.gz} | 0 ...softseg.json => sub-brnoCeitec03_space-other_T2w_softseg.json} | 0 ...seg.nii.gz => sub-brnoCeitec03_space-other_T2w_softseg.nii.gz} | 0 ...=> sub-brnoCeitec04_flip-1_mt-on_space-other_MTS_softseg.json} | 0 ... sub-brnoCeitec04_flip-1_mt-on_space-other_MTS_softseg.nii.gz} | 0 ...> sub-brnoCeitec04_flip-2_mt-off_space-other_MTS_softseg.json} | 0 ...sub-brnoCeitec04_flip-2_mt-off_space-other_MTS_softseg.nii.gz} | 0 ...softseg.json => sub-brnoCeitec04_space-other_T1w_softseg.json} | 0 ...seg.nii.gz => sub-brnoCeitec04_space-other_T1w_softseg.nii.gz} | 0 ...tseg.json => sub-brnoCeitec04_space-other_T2star_softseg.json} | 0 ....nii.gz => sub-brnoCeitec04_space-other_T2star_softseg.nii.gz} | 0 ...softseg.json => sub-brnoCeitec04_space-other_T2w_softseg.json} | 0 ...seg.nii.gz => sub-brnoCeitec04_space-other_T2w_softseg.nii.gz} | 0 ...=> sub-brnoCeitec05_flip-1_mt-on_space-other_MTS_softseg.json} | 0 ... sub-brnoCeitec05_flip-1_mt-on_space-other_MTS_softseg.nii.gz} | 0 ...> sub-brnoCeitec05_flip-2_mt-off_space-other_MTS_softseg.json} | 0 ...sub-brnoCeitec05_flip-2_mt-off_space-other_MTS_softseg.nii.gz} | 0 ...softseg.json => sub-brnoCeitec05_space-other_T1w_softseg.json} | 0 ...seg.nii.gz => sub-brnoCeitec05_space-other_T1w_softseg.nii.gz} | 0 ...tseg.json => sub-brnoCeitec05_space-other_T2star_softseg.json} | 0 ....nii.gz => sub-brnoCeitec05_space-other_T2star_softseg.nii.gz} | 0 ...softseg.json => sub-brnoCeitec05_space-other_T2w_softseg.json} | 0 ...seg.nii.gz => sub-brnoCeitec05_space-other_T2w_softseg.nii.gz} | 0 ...=> sub-brnoCeitec06_flip-1_mt-on_space-other_MTS_softseg.json} | 0 ... sub-brnoCeitec06_flip-1_mt-on_space-other_MTS_softseg.nii.gz} | 0 ...> sub-brnoCeitec06_flip-2_mt-off_space-other_MTS_softseg.json} | 0 ...sub-brnoCeitec06_flip-2_mt-off_space-other_MTS_softseg.nii.gz} | 0 ...softseg.json => sub-brnoCeitec06_space-other_T1w_softseg.json} | 0 ...seg.nii.gz => sub-brnoCeitec06_space-other_T1w_softseg.nii.gz} | 0 ...tseg.json => sub-brnoCeitec06_space-other_T2star_softseg.json} | 0 ....nii.gz => sub-brnoCeitec06_space-other_T2star_softseg.nii.gz} | 0 ...softseg.json => sub-brnoCeitec06_space-other_T2w_softseg.json} | 0 ...seg.nii.gz => sub-brnoCeitec06_space-other_T2w_softseg.nii.gz} | 0 ...on => sub-brnoUhb01_flip-1_mt-on_space-other_MTS_softseg.json} | 0 ... => sub-brnoUhb01_flip-1_mt-on_space-other_MTS_softseg.nii.gz} | 0 ...n => sub-brnoUhb01_flip-2_mt-off_space-other_MTS_softseg.json} | 0 ...=> sub-brnoUhb01_flip-2_mt-off_space-other_MTS_softseg.nii.gz} | 0 ...2w_softseg.json => sub-brnoUhb01_space-other_T1w_softseg.json} | 0 ...oftseg.nii.gz => sub-brnoUhb01_space-other_T1w_softseg.nii.gz} | 0 ...softseg.json => sub-brnoUhb01_space-other_T2star_softseg.json} | 0 ...seg.nii.gz => sub-brnoUhb01_space-other_T2star_softseg.nii.gz} | 0 ...TS_softseg.json => sub-brnoUhb01_space-other_T2w_softseg.json} | 0 ...oftseg.nii.gz => 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sub-dresden02_space-other_T2star_softseg.nii.gz} | 0 ...TS_softseg.json => sub-dresden02_space-other_T2w_softseg.json} | 0 ...oftseg.nii.gz => sub-dresden02_space-other_T2w_softseg.nii.gz} | 0 ...=> sub-fslAchieva01_flip-1_mt-on_space-other_MTS_softseg.json} | 0 ... sub-fslAchieva01_flip-1_mt-on_space-other_MTS_softseg.nii.gz} | 0 ...> sub-fslAchieva01_flip-2_mt-off_space-other_MTS_softseg.json} | 0 ...sub-fslAchieva01_flip-2_mt-off_space-other_MTS_softseg.nii.gz} | 0 ...softseg.json => sub-fslAchieva01_space-other_T1w_softseg.json} | 0 ...seg.nii.gz => sub-fslAchieva01_space-other_T1w_softseg.nii.gz} | 0 ...tseg.json => sub-fslAchieva01_space-other_T2star_softseg.json} | 0 ....nii.gz => sub-fslAchieva01_space-other_T2star_softseg.nii.gz} | 0 ...softseg.json => sub-fslAchieva01_space-other_T2w_softseg.json} | 0 ...seg.nii.gz => sub-fslAchieva01_space-other_T2w_softseg.nii.gz} | 0 ...=> sub-fslAchieva02_flip-1_mt-on_space-other_MTS_softseg.json} | 0 ... sub-fslAchieva02_flip-1_mt-on_space-other_MTS_softseg.nii.gz} | 0 ...> sub-fslAchieva02_flip-2_mt-off_space-other_MTS_softseg.json} | 0 ...sub-fslAchieva02_flip-2_mt-off_space-other_MTS_softseg.nii.gz} | 0 ...softseg.json => sub-fslAchieva02_space-other_T1w_softseg.json} | 0 ...seg.nii.gz => sub-fslAchieva02_space-other_T1w_softseg.nii.gz} | 0 ...tseg.json => sub-fslAchieva02_space-other_T2star_softseg.json} | 0 ....nii.gz => sub-fslAchieva02_space-other_T2star_softseg.nii.gz} | 0 ...softseg.json => sub-fslAchieva02_space-other_T2w_softseg.json} | 0 ...seg.nii.gz => sub-fslAchieva02_space-other_T2w_softseg.nii.gz} | 0 ...=> sub-fslAchieva03_flip-1_mt-on_space-other_MTS_softseg.json} | 0 ... sub-fslAchieva03_flip-1_mt-on_space-other_MTS_softseg.nii.gz} | 0 ...> sub-fslAchieva03_flip-2_mt-off_space-other_MTS_softseg.json} | 0 ...sub-fslAchieva03_flip-2_mt-off_space-other_MTS_softseg.nii.gz} | 0 ...softseg.json => sub-fslAchieva03_space-other_T1w_softseg.json} | 0 ...seg.nii.gz => sub-fslAchieva03_space-other_T1w_softseg.nii.gz} | 0 ...tseg.json => sub-fslAchieva03_space-other_T2star_softseg.json} | 0 ....nii.gz => sub-fslAchieva03_space-other_T2star_softseg.nii.gz} | 0 ...softseg.json => sub-fslAchieva03_space-other_T2w_softseg.json} | 0 ...seg.nii.gz => sub-fslAchieva03_space-other_T2w_softseg.nii.gz} | 0 ...=> sub-fslAchieva04_flip-1_mt-on_space-other_MTS_softseg.json} | 0 ... sub-fslAchieva04_flip-1_mt-on_space-other_MTS_softseg.nii.gz} | 0 ...> sub-fslAchieva04_flip-2_mt-off_space-other_MTS_softseg.json} | 0 ...sub-fslAchieva04_flip-2_mt-off_space-other_MTS_softseg.nii.gz} | 0 ...softseg.json => sub-fslAchieva04_space-other_T1w_softseg.json} | 0 ...seg.nii.gz => sub-fslAchieva04_space-other_T1w_softseg.nii.gz} | 0 ...tseg.json => sub-fslAchieva04_space-other_T2star_softseg.json} | 0 ....nii.gz => sub-fslAchieva04_space-other_T2star_softseg.nii.gz} | 0 ...softseg.json => sub-fslAchieva04_space-other_T2w_softseg.json} | 0 ...seg.nii.gz => sub-fslAchieva04_space-other_T2w_softseg.nii.gz} | 0 ...=> sub-fslAchieva05_flip-1_mt-on_space-other_MTS_softseg.json} | 0 ... sub-fslAchieva05_flip-1_mt-on_space-other_MTS_softseg.nii.gz} | 0 ...> sub-fslAchieva05_flip-2_mt-off_space-other_MTS_softseg.json} | 0 ...sub-fslAchieva05_flip-2_mt-off_space-other_MTS_softseg.nii.gz} | 0 ...softseg.json => sub-fslAchieva05_space-other_T1w_softseg.json} | 0 ...seg.nii.gz => sub-fslAchieva05_space-other_T1w_softseg.nii.gz} | 0 ...tseg.json => sub-fslAchieva05_space-other_T2star_softseg.json} | 0 ....nii.gz => sub-fslAchieva05_space-other_T2star_softseg.nii.gz} | 0 ...softseg.json => sub-fslAchieva05_space-other_T2w_softseg.json} | 0 ...seg.nii.gz => sub-fslAchieva05_space-other_T2w_softseg.nii.gz} | 0 ...=> sub-fslAchieva06_flip-1_mt-on_space-other_MTS_softseg.json} | 0 ... sub-fslAchieva06_flip-1_mt-on_space-other_MTS_softseg.nii.gz} | 0 ...> sub-fslAchieva06_flip-2_mt-off_space-other_MTS_softseg.json} | 0 ...sub-fslAchieva06_flip-2_mt-off_space-other_MTS_softseg.nii.gz} | 0 ...softseg.json => sub-fslAchieva06_space-other_T1w_softseg.json} | 0 ...seg.nii.gz => sub-fslAchieva06_space-other_T1w_softseg.nii.gz} | 0 ...tseg.json => sub-fslAchieva06_space-other_T2star_softseg.json} | 0 ....nii.gz => sub-fslAchieva06_space-other_T2star_softseg.nii.gz} | 0 ...softseg.json => sub-fslAchieva06_space-other_T2w_softseg.json} | 0 ...seg.nii.gz => sub-fslAchieva06_space-other_T2w_softseg.nii.gz} | 0 ... => sub-fslPrisma01_flip-1_mt-on_space-other_MTS_softseg.json} | 0 ...> sub-fslPrisma01_flip-1_mt-on_space-other_MTS_softseg.nii.gz} | 0 ...=> sub-fslPrisma01_flip-2_mt-off_space-other_MTS_softseg.json} | 0 ... sub-fslPrisma01_flip-2_mt-off_space-other_MTS_softseg.nii.gz} | 0 ..._softseg.json => sub-fslPrisma01_space-other_T1w_softseg.json} | 0 ...tseg.nii.gz => sub-fslPrisma01_space-other_T1w_softseg.nii.gz} | 0 ...ftseg.json => sub-fslPrisma01_space-other_T2star_softseg.json} | 0 ...g.nii.gz => sub-fslPrisma01_space-other_T2star_softseg.nii.gz} | 0 ..._softseg.json => sub-fslPrisma01_space-other_T2w_softseg.json} | 0 ...tseg.nii.gz => sub-fslPrisma01_space-other_T2w_softseg.nii.gz} | 0 ... => sub-fslPrisma02_flip-1_mt-on_space-other_MTS_softseg.json} | 0 ...> sub-fslPrisma02_flip-1_mt-on_space-other_MTS_softseg.nii.gz} | 0 ...=> sub-fslPrisma02_flip-2_mt-off_space-other_MTS_softseg.json} | 0 ... sub-fslPrisma02_flip-2_mt-off_space-other_MTS_softseg.nii.gz} | 0 ..._softseg.json => sub-fslPrisma02_space-other_T1w_softseg.json} | 0 ...tseg.nii.gz => sub-fslPrisma02_space-other_T1w_softseg.nii.gz} | 0 ...ftseg.json => sub-fslPrisma02_space-other_T2star_softseg.json} | 0 ...g.nii.gz => sub-fslPrisma02_space-other_T2star_softseg.nii.gz} | 0 ..._softseg.json => sub-fslPrisma02_space-other_T2w_softseg.json} | 0 ...tseg.nii.gz => sub-fslPrisma02_space-other_T2w_softseg.nii.gz} | 0 ... => sub-fslPrisma03_flip-1_mt-on_space-other_MTS_softseg.json} | 0 ...> sub-fslPrisma03_flip-1_mt-on_space-other_MTS_softseg.nii.gz} | 0 ...=> sub-fslPrisma03_flip-2_mt-off_space-other_MTS_softseg.json} | 0 ... sub-fslPrisma03_flip-2_mt-off_space-other_MTS_softseg.nii.gz} | 0 ..._softseg.json => sub-fslPrisma03_space-other_T1w_softseg.json} | 0 ...tseg.nii.gz => sub-fslPrisma03_space-other_T1w_softseg.nii.gz} | 0 ...ftseg.json => sub-fslPrisma03_space-other_T2star_softseg.json} | 0 ...g.nii.gz => sub-fslPrisma03_space-other_T2star_softseg.nii.gz} | 0 ..._softseg.json => sub-fslPrisma03_space-other_T2w_softseg.json} | 0 ...tseg.nii.gz => sub-fslPrisma03_space-other_T2w_softseg.nii.gz} | 0 ... => sub-fslPrisma04_flip-1_mt-on_space-other_MTS_softseg.json} | 0 ...> sub-fslPrisma04_flip-1_mt-on_space-other_MTS_softseg.nii.gz} | 0 ...=> sub-fslPrisma04_flip-2_mt-off_space-other_MTS_softseg.json} | 0 ... sub-fslPrisma04_flip-2_mt-off_space-other_MTS_softseg.nii.gz} | 0 ..._softseg.json => sub-fslPrisma04_space-other_T1w_softseg.json} | 0 ...tseg.nii.gz => 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sub-fslPrisma05_space-other_T2w_softseg.nii.gz} | 0 ... => sub-fslPrisma06_flip-1_mt-on_space-other_MTS_softseg.json} | 0 ...> sub-fslPrisma06_flip-1_mt-on_space-other_MTS_softseg.nii.gz} | 0 ...=> sub-fslPrisma06_flip-2_mt-off_space-other_MTS_softseg.json} | 0 ... sub-fslPrisma06_flip-2_mt-off_space-other_MTS_softseg.nii.gz} | 0 ..._softseg.json => sub-fslPrisma06_space-other_T1w_softseg.json} | 0 ...tseg.nii.gz => sub-fslPrisma06_space-other_T1w_softseg.nii.gz} | 0 ...ftseg.json => sub-fslPrisma06_space-other_T2star_softseg.json} | 0 ...g.nii.gz => sub-fslPrisma06_space-other_T2star_softseg.nii.gz} | 0 ..._softseg.json => sub-fslPrisma06_space-other_T2w_softseg.json} | 0 ...tseg.nii.gz => sub-fslPrisma06_space-other_T2w_softseg.nii.gz} | 0 ...son => sub-geneva01_flip-1_mt-on_space-other_MTS_softseg.json} | 0 ...z => sub-geneva01_flip-1_mt-on_space-other_MTS_softseg.nii.gz} | 0 ...on => sub-geneva01_flip-2_mt-off_space-other_MTS_softseg.json} | 0 ... => 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sub-mniS07_flip-1_mt-on_space-other_MTS_softseg.nii.gz} | 0 ...json => sub-mniS07_flip-2_mt-off_space-other_MTS_softseg.json} | 0 ...gz => sub-mniS07_flip-2_mt-off_space-other_MTS_softseg.nii.gz} | 0 ...7_T2w_softseg.json => sub-mniS07_space-other_T1w_softseg.json} | 0 ...w_softseg.nii.gz => sub-mniS07_space-other_T1w_softseg.nii.gz} | 0 ...TS_softseg.json => sub-mniS07_space-other_T2star_softseg.json} | 0 ...oftseg.nii.gz => sub-mniS07_space-other_T2star_softseg.nii.gz} | 0 ...f_MTS_softseg.json => sub-mniS07_space-other_T2w_softseg.json} | 0 ...w_softseg.nii.gz => sub-mniS07_space-other_T2w_softseg.nii.gz} | 0 ....json => sub-mniS08_flip-1_mt-on_space-other_MTS_softseg.json} | 0 ....gz => sub-mniS08_flip-1_mt-on_space-other_MTS_softseg.nii.gz} | 0 ...json => sub-mniS08_flip-2_mt-off_space-other_MTS_softseg.json} | 0 ...gz => sub-mniS08_flip-2_mt-off_space-other_MTS_softseg.nii.gz} | 0 ...2star_softseg.json => sub-mniS08_space-other_T1w_softseg.json} | 0 ...w_softseg.nii.gz => 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sub-mniS09_space-other_T2w_softseg.nii.gz} | 0 ...=> sub-mountSinai01_flip-1_mt-on_space-other_MTS_softseg.json} | 0 ... sub-mountSinai01_flip-1_mt-on_space-other_MTS_softseg.nii.gz} | 0 ...> sub-mountSinai01_flip-2_mt-off_space-other_MTS_softseg.json} | 0 ...sub-mountSinai01_flip-2_mt-off_space-other_MTS_softseg.nii.gz} | 0 ...softseg.json => sub-mountSinai01_space-other_T1w_softseg.json} | 0 ...seg.nii.gz => sub-mountSinai01_space-other_T1w_softseg.nii.gz} | 0 ...tseg.json => sub-mountSinai01_space-other_T2star_softseg.json} | 0 ....nii.gz => sub-mountSinai01_space-other_T2star_softseg.nii.gz} | 0 ...softseg.json => sub-mountSinai01_space-other_T2w_softseg.json} | 0 ...seg.nii.gz => sub-mountSinai01_space-other_T2w_softseg.nii.gz} | 0 ...=> sub-mountSinai02_flip-1_mt-on_space-other_MTS_softseg.json} | 0 ... sub-mountSinai02_flip-1_mt-on_space-other_MTS_softseg.nii.gz} | 0 ...> sub-mountSinai02_flip-2_mt-off_space-other_MTS_softseg.json} | 0 ...sub-mountSinai02_flip-2_mt-off_space-other_MTS_softseg.nii.gz} | 0 ...softseg.json => sub-mountSinai02_space-other_T1w_softseg.json} | 0 ...seg.nii.gz => sub-mountSinai02_space-other_T1w_softseg.nii.gz} | 0 ...tseg.json => sub-mountSinai02_space-other_T2star_softseg.json} | 0 ....nii.gz => sub-mountSinai02_space-other_T2star_softseg.nii.gz} | 0 ...softseg.json => sub-mountSinai02_space-other_T2w_softseg.json} | 0 ...seg.nii.gz => sub-mountSinai02_space-other_T2w_softseg.nii.gz} | 0 ...=> sub-mountSinai04_flip-1_mt-on_space-other_MTS_softseg.json} | 0 ... sub-mountSinai04_flip-1_mt-on_space-other_MTS_softseg.nii.gz} | 0 ...> sub-mountSinai04_flip-2_mt-off_space-other_MTS_softseg.json} | 0 ...sub-mountSinai04_flip-2_mt-off_space-other_MTS_softseg.nii.gz} | 0 ...softseg.json => sub-mountSinai04_space-other_T1w_softseg.json} | 0 ...seg.nii.gz => sub-mountSinai04_space-other_T1w_softseg.nii.gz} | 0 ...tseg.json => sub-mountSinai04_space-other_T2star_softseg.json} | 0 ....nii.gz => sub-mountSinai04_space-other_T2star_softseg.nii.gz} | 0 ...softseg.json => sub-mountSinai04_space-other_T2w_softseg.json} | 0 ...seg.nii.gz => sub-mountSinai04_space-other_T2w_softseg.nii.gz} | 0 ...=> sub-mountSinai05_flip-1_mt-on_space-other_MTS_softseg.json} | 0 ... sub-mountSinai05_flip-1_mt-on_space-other_MTS_softseg.nii.gz} | 0 ...> sub-mountSinai05_flip-2_mt-off_space-other_MTS_softseg.json} | 0 ...sub-mountSinai05_flip-2_mt-off_space-other_MTS_softseg.nii.gz} | 0 ...softseg.json => sub-mountSinai05_space-other_T1w_softseg.json} | 0 ...seg.nii.gz => sub-mountSinai05_space-other_T1w_softseg.nii.gz} | 0 ...tseg.json => sub-mountSinai05_space-other_T2star_softseg.json} | 0 ....nii.gz => sub-mountSinai05_space-other_T2star_softseg.nii.gz} | 0 ...softseg.json => sub-mountSinai05_space-other_T2w_softseg.json} | 0 ...seg.nii.gz => sub-mountSinai05_space-other_T2w_softseg.nii.gz} | 0 ...=> sub-mountSinai06_flip-1_mt-on_space-other_MTS_softseg.json} | 0 ... sub-mountSinai06_flip-1_mt-on_space-other_MTS_softseg.nii.gz} | 0 ...> sub-mountSinai06_flip-2_mt-off_space-other_MTS_softseg.json} | 0 ...sub-mountSinai06_flip-2_mt-off_space-other_MTS_softseg.nii.gz} | 0 ...softseg.json => sub-mountSinai06_space-other_T1w_softseg.json} | 0 ...seg.nii.gz => sub-mountSinai06_space-other_T1w_softseg.nii.gz} | 0 ...tseg.json => sub-mountSinai06_space-other_T2star_softseg.json} | 0 ....nii.gz => sub-mountSinai06_space-other_T2star_softseg.nii.gz} | 0 ...softseg.json => sub-mountSinai06_space-other_T2w_softseg.json} | 0 ...seg.nii.gz => sub-mountSinai06_space-other_T2w_softseg.nii.gz} | 0 ...son => sub-mpicbs01_flip-1_mt-on_space-other_MTS_softseg.json} | 0 ...z => sub-mpicbs01_flip-1_mt-on_space-other_MTS_softseg.nii.gz} | 0 ...on => sub-mpicbs01_flip-2_mt-off_space-other_MTS_softseg.json} | 0 ... => sub-mpicbs01_flip-2_mt-off_space-other_MTS_softseg.nii.gz} | 0 ...T2w_softseg.json => sub-mpicbs01_space-other_T1w_softseg.json} | 0 ...softseg.nii.gz => 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sub-oxfordFmrib06_space-other_T2w_softseg.nii.gz} | 0 ...> sub-oxfordFmrib07_flip-1_mt-on_space-other_MTS_softseg.json} | 0 ...sub-oxfordFmrib07_flip-1_mt-on_space-other_MTS_softseg.nii.gz} | 0 ... sub-oxfordFmrib07_flip-2_mt-off_space-other_MTS_softseg.json} | 0 ...ub-oxfordFmrib07_flip-2_mt-off_space-other_MTS_softseg.nii.gz} | 0 ...oftseg.json => sub-oxfordFmrib07_space-other_T1w_softseg.json} | 0 ...eg.nii.gz => sub-oxfordFmrib07_space-other_T1w_softseg.nii.gz} | 0 ...seg.json => sub-oxfordFmrib07_space-other_T2star_softseg.json} | 0 ...nii.gz => sub-oxfordFmrib07_space-other_T2star_softseg.nii.gz} | 0 ...oftseg.json => sub-oxfordFmrib07_space-other_T2w_softseg.json} | 0 ...eg.nii.gz => sub-oxfordFmrib07_space-other_T2w_softseg.nii.gz} | 0 ...> sub-oxfordFmrib08_flip-1_mt-on_space-other_MTS_softseg.json} | 0 ...sub-oxfordFmrib08_flip-1_mt-on_space-other_MTS_softseg.nii.gz} | 0 ... sub-oxfordFmrib08_flip-2_mt-off_space-other_MTS_softseg.json} | 0 ...ub-oxfordFmrib08_flip-2_mt-off_space-other_MTS_softseg.nii.gz} | 0 ...oftseg.json => sub-oxfordFmrib08_space-other_T1w_softseg.json} | 0 ...eg.nii.gz => sub-oxfordFmrib08_space-other_T1w_softseg.nii.gz} | 0 ...seg.json => sub-oxfordFmrib08_space-other_T2star_softseg.json} | 0 ...nii.gz => sub-oxfordFmrib08_space-other_T2star_softseg.nii.gz} | 0 ...oftseg.json => sub-oxfordFmrib08_space-other_T2w_softseg.json} | 0 ...eg.nii.gz => sub-oxfordFmrib08_space-other_T2w_softseg.nii.gz} | 0 ...> sub-oxfordFmrib09_flip-1_mt-on_space-other_MTS_softseg.json} | 0 ...sub-oxfordFmrib09_flip-1_mt-on_space-other_MTS_softseg.nii.gz} | 0 ... sub-oxfordFmrib09_flip-2_mt-off_space-other_MTS_softseg.json} | 0 ...ub-oxfordFmrib09_flip-2_mt-off_space-other_MTS_softseg.nii.gz} | 0 ...oftseg.json => sub-oxfordFmrib09_space-other_T1w_softseg.json} | 0 ...eg.nii.gz => sub-oxfordFmrib09_space-other_T1w_softseg.nii.gz} | 0 ...seg.json => sub-oxfordFmrib09_space-other_T2star_softseg.json} | 0 ...nii.gz => sub-oxfordFmrib09_space-other_T2star_softseg.nii.gz} | 0 ...oftseg.json => sub-oxfordFmrib09_space-other_T2w_softseg.json} | 0 ...eg.nii.gz => sub-oxfordFmrib09_space-other_T2w_softseg.nii.gz} | 0 ...> sub-oxfordFmrib10_flip-1_mt-on_space-other_MTS_softseg.json} | 0 ...sub-oxfordFmrib10_flip-1_mt-on_space-other_MTS_softseg.nii.gz} | 0 ... sub-oxfordFmrib10_flip-2_mt-off_space-other_MTS_softseg.json} | 0 ...ub-oxfordFmrib10_flip-2_mt-off_space-other_MTS_softseg.nii.gz} | 0 ...oftseg.json => sub-oxfordFmrib10_space-other_T1w_softseg.json} | 0 ...eg.nii.gz => sub-oxfordFmrib10_space-other_T1w_softseg.nii.gz} | 0 ...seg.json => sub-oxfordFmrib10_space-other_T2star_softseg.json} | 0 ...nii.gz => sub-oxfordFmrib10_space-other_T2star_softseg.nii.gz} | 0 ...oftseg.json => sub-oxfordFmrib10_space-other_T2w_softseg.json} | 0 ...eg.nii.gz => sub-oxfordFmrib10_space-other_T2w_softseg.nii.gz} | 0 ...> sub-oxfordFmrib11_flip-1_mt-on_space-other_MTS_softseg.json} | 0 ...sub-oxfordFmrib11_flip-1_mt-on_space-other_MTS_softseg.nii.gz} | 0 ... sub-oxfordFmrib11_flip-2_mt-off_space-other_MTS_softseg.json} | 0 ...ub-oxfordFmrib11_flip-2_mt-off_space-other_MTS_softseg.nii.gz} | 0 ...oftseg.json => sub-oxfordFmrib11_space-other_T1w_softseg.json} | 0 ...eg.nii.gz => sub-oxfordFmrib11_space-other_T1w_softseg.nii.gz} | 0 ...seg.json => sub-oxfordFmrib11_space-other_T2star_softseg.json} | 0 ...nii.gz => sub-oxfordFmrib11_space-other_T2star_softseg.nii.gz} | 0 ...oftseg.json => sub-oxfordFmrib11_space-other_T2w_softseg.json} | 0 ...eg.nii.gz => sub-oxfordFmrib11_space-other_T2w_softseg.nii.gz} | 0 ...=> sub-oxfordOhba01_flip-1_mt-on_space-other_MTS_softseg.json} | 0 ... sub-oxfordOhba01_flip-1_mt-on_space-other_MTS_softseg.nii.gz} | 0 ...> sub-oxfordOhba01_flip-2_mt-off_space-other_MTS_softseg.json} | 0 ...sub-oxfordOhba01_flip-2_mt-off_space-other_MTS_softseg.nii.gz} | 0 ...softseg.json => sub-oxfordOhba01_space-other_T1w_softseg.json} | 0 ...seg.nii.gz => sub-oxfordOhba01_space-other_T1w_softseg.nii.gz} | 0 ...tseg.json => sub-oxfordOhba01_space-other_T2star_softseg.json} | 0 ....nii.gz => sub-oxfordOhba01_space-other_T2star_softseg.nii.gz} | 0 ...softseg.json => sub-oxfordOhba01_space-other_T2w_softseg.json} | 0 ...seg.nii.gz => sub-oxfordOhba01_space-other_T2w_softseg.nii.gz} | 0 ...=> sub-oxfordOhba02_flip-1_mt-on_space-other_MTS_softseg.json} | 0 ... sub-oxfordOhba02_flip-1_mt-on_space-other_MTS_softseg.nii.gz} | 0 ...> sub-oxfordOhba02_flip-2_mt-off_space-other_MTS_softseg.json} | 0 ...sub-oxfordOhba02_flip-2_mt-off_space-other_MTS_softseg.nii.gz} | 0 ...softseg.json => sub-oxfordOhba02_space-other_T1w_softseg.json} | 0 ...seg.nii.gz => sub-oxfordOhba02_space-other_T1w_softseg.nii.gz} | 0 ...tseg.json => sub-oxfordOhba02_space-other_T2star_softseg.json} | 0 ....nii.gz => sub-oxfordOhba02_space-other_T2star_softseg.nii.gz} | 0 ...softseg.json => sub-oxfordOhba02_space-other_T2w_softseg.json} | 0 ...seg.nii.gz => sub-oxfordOhba02_space-other_T2w_softseg.nii.gz} | 0 ...=> sub-oxfordOhba03_flip-1_mt-on_space-other_MTS_softseg.json} | 0 ... sub-oxfordOhba03_flip-1_mt-on_space-other_MTS_softseg.nii.gz} | 0 ...> sub-oxfordOhba03_flip-2_mt-off_space-other_MTS_softseg.json} | 0 ...sub-oxfordOhba03_flip-2_mt-off_space-other_MTS_softseg.nii.gz} | 0 ...softseg.json => sub-oxfordOhba03_space-other_T1w_softseg.json} | 0 ...seg.nii.gz => sub-oxfordOhba03_space-other_T1w_softseg.nii.gz} | 0 ...tseg.json => sub-oxfordOhba03_space-other_T2star_softseg.json} | 0 ....nii.gz => sub-oxfordOhba03_space-other_T2star_softseg.nii.gz} | 0 ...softseg.json => sub-oxfordOhba03_space-other_T2w_softseg.json} | 0 ...seg.nii.gz => sub-oxfordOhba03_space-other_T2w_softseg.nii.gz} | 0 ...=> sub-oxfordOhba04_flip-1_mt-on_space-other_MTS_softseg.json} | 0 ... sub-oxfordOhba04_flip-1_mt-on_space-other_MTS_softseg.nii.gz} | 0 ...> sub-oxfordOhba04_flip-2_mt-off_space-other_MTS_softseg.json} | 0 ...sub-oxfordOhba04_flip-2_mt-off_space-other_MTS_softseg.nii.gz} | 0 ...softseg.json => sub-oxfordOhba04_space-other_T1w_softseg.json} | 0 ...seg.nii.gz => sub-oxfordOhba04_space-other_T1w_softseg.nii.gz} | 0 ...tseg.json => sub-oxfordOhba04_space-other_T2star_softseg.json} | 0 ....nii.gz => sub-oxfordOhba04_space-other_T2star_softseg.nii.gz} | 0 ...softseg.json => sub-oxfordOhba04_space-other_T2w_softseg.json} | 0 ...seg.nii.gz => sub-oxfordOhba04_space-other_T2w_softseg.nii.gz} | 0 ...=> sub-oxfordOhba05_flip-1_mt-on_space-other_MTS_softseg.json} | 0 ... sub-oxfordOhba05_flip-1_mt-on_space-other_MTS_softseg.nii.gz} | 0 ...> sub-oxfordOhba05_flip-2_mt-off_space-other_MTS_softseg.json} | 0 ...sub-oxfordOhba05_flip-2_mt-off_space-other_MTS_softseg.nii.gz} | 0 ...softseg.json => sub-oxfordOhba05_space-other_T1w_softseg.json} | 0 ...seg.nii.gz => sub-oxfordOhba05_space-other_T1w_softseg.nii.gz} | 0 ...tseg.json => sub-oxfordOhba05_space-other_T2star_softseg.json} | 0 ....nii.gz => sub-oxfordOhba05_space-other_T2star_softseg.nii.gz} | 0 ...softseg.json => sub-oxfordOhba05_space-other_T2w_softseg.json} | 0 ...seg.nii.gz => sub-oxfordOhba05_space-other_T2w_softseg.nii.gz} | 0 ...json => sub-pavia01_flip-1_mt-on_space-other_MTS_softseg.json} | 0 ...gz => sub-pavia01_flip-1_mt-on_space-other_MTS_softseg.nii.gz} | 0 ...son => sub-pavia01_flip-2_mt-off_space-other_MTS_softseg.json} | 0 ...z => sub-pavia01_flip-2_mt-off_space-other_MTS_softseg.nii.gz} | 0 ..._T2w_softseg.json => sub-pavia01_space-other_T1w_softseg.json} | 0 ..._softseg.nii.gz => sub-pavia01_space-other_T1w_softseg.nii.gz} | 0 ...S_softseg.json => sub-pavia01_space-other_T2star_softseg.json} | 0 ...ftseg.nii.gz => sub-pavia01_space-other_T2star_softseg.nii.gz} | 0 ..._MTS_softseg.json => sub-pavia01_space-other_T2w_softseg.json} | 0 ..._softseg.nii.gz => sub-pavia01_space-other_T2w_softseg.nii.gz} | 0 ...json => sub-pavia02_flip-1_mt-on_space-other_MTS_softseg.json} | 0 ...gz => sub-pavia02_flip-1_mt-on_space-other_MTS_softseg.nii.gz} | 0 ...son => sub-pavia02_flip-2_mt-off_space-other_MTS_softseg.json} | 0 ...z => sub-pavia02_flip-2_mt-off_space-other_MTS_softseg.nii.gz} | 0 ..._T2w_softseg.json => sub-pavia02_space-other_T1w_softseg.json} | 0 ..._softseg.nii.gz => sub-pavia02_space-other_T1w_softseg.nii.gz} | 0 ...S_softseg.json => sub-pavia02_space-other_T2star_softseg.json} | 0 ...ftseg.nii.gz => sub-pavia02_space-other_T2star_softseg.nii.gz} | 0 ..._MTS_softseg.json => sub-pavia02_space-other_T2w_softseg.json} | 0 ..._softseg.nii.gz => sub-pavia02_space-other_T2w_softseg.nii.gz} | 0 ...json => sub-pavia03_flip-1_mt-on_space-other_MTS_softseg.json} | 0 ...gz => sub-pavia03_flip-1_mt-on_space-other_MTS_softseg.nii.gz} | 0 ...son => sub-pavia03_flip-2_mt-off_space-other_MTS_softseg.json} | 0 ...z => sub-pavia03_flip-2_mt-off_space-other_MTS_softseg.nii.gz} | 0 ..._T2w_softseg.json => sub-pavia03_space-other_T1w_softseg.json} | 0 ..._softseg.nii.gz => 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sub-perform03_flip-1_mt-on_space-other_MTS_softseg.nii.gz} | 0 ...n => sub-perform03_flip-2_mt-off_space-other_MTS_softseg.json} | 0 ...=> sub-perform03_flip-2_mt-off_space-other_MTS_softseg.nii.gz} | 0 ...1w_softseg.json => sub-perform03_space-other_T1w_softseg.json} | 0 ...oftseg.nii.gz => sub-perform03_space-other_T1w_softseg.nii.gz} | 0 ...softseg.json => sub-perform03_space-other_T2star_softseg.json} | 0 ...seg.nii.gz => sub-perform03_space-other_T2star_softseg.nii.gz} | 0 ...2w_softseg.json => sub-perform03_space-other_T2w_softseg.json} | 0 ...oftseg.nii.gz => sub-perform03_space-other_T2w_softseg.nii.gz} | 0 ...on => sub-perform04_flip-1_mt-on_space-other_MTS_softseg.json} | 0 ... => sub-perform04_flip-1_mt-on_space-other_MTS_softseg.nii.gz} | 0 ...n => sub-perform04_flip-2_mt-off_space-other_MTS_softseg.json} | 0 ...=> sub-perform04_flip-2_mt-off_space-other_MTS_softseg.nii.gz} | 0 ...2w_softseg.json => sub-perform04_space-other_T1w_softseg.json} | 0 ...oftseg.nii.gz => 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sub-perform05_space-other_T2w_softseg.nii.gz} | 0 ...on => sub-perform06_flip-1_mt-on_space-other_MTS_softseg.json} | 0 ... => sub-perform06_flip-1_mt-on_space-other_MTS_softseg.nii.gz} | 0 ...n => sub-perform06_flip-2_mt-off_space-other_MTS_softseg.json} | 0 ...=> sub-perform06_flip-2_mt-off_space-other_MTS_softseg.nii.gz} | 0 ...2w_softseg.json => sub-perform06_space-other_T1w_softseg.json} | 0 ...oftseg.nii.gz => sub-perform06_space-other_T1w_softseg.nii.gz} | 0 ...softseg.json => sub-perform06_space-other_T2star_softseg.json} | 0 ...seg.nii.gz => sub-perform06_space-other_T2star_softseg.nii.gz} | 0 ...TS_softseg.json => sub-perform06_space-other_T2w_softseg.json} | 0 ...oftseg.nii.gz => sub-perform06_space-other_T2w_softseg.nii.gz} | 0 ...=> sub-queensland01_flip-1_mt-on_space-other_MTS_softseg.json} | 0 ... sub-queensland01_flip-1_mt-on_space-other_MTS_softseg.nii.gz} | 0 ...> sub-queensland01_flip-2_mt-off_space-other_MTS_softseg.json} | 0 ...sub-queensland01_flip-2_mt-off_space-other_MTS_softseg.nii.gz} | 0 ...softseg.json => sub-queensland01_space-other_T1w_softseg.json} | 0 ...seg.nii.gz => sub-queensland01_space-other_T1w_softseg.nii.gz} | 0 ...tseg.json => sub-queensland01_space-other_T2star_softseg.json} | 0 ....nii.gz => sub-queensland01_space-other_T2star_softseg.nii.gz} | 0 ...softseg.json => sub-queensland01_space-other_T2w_softseg.json} | 0 ...seg.nii.gz => sub-queensland01_space-other_T2w_softseg.nii.gz} | 0 ...=> sub-queensland02_flip-1_mt-on_space-other_MTS_softseg.json} | 0 ... sub-queensland02_flip-1_mt-on_space-other_MTS_softseg.nii.gz} | 0 ...> sub-queensland02_flip-2_mt-off_space-other_MTS_softseg.json} | 0 ...sub-queensland02_flip-2_mt-off_space-other_MTS_softseg.nii.gz} | 0 ...softseg.json => sub-queensland02_space-other_T1w_softseg.json} | 0 ...seg.nii.gz => sub-queensland02_space-other_T1w_softseg.nii.gz} | 0 ...tseg.json => sub-queensland02_space-other_T2star_softseg.json} | 0 ....nii.gz => sub-queensland02_space-other_T2star_softseg.nii.gz} | 0 ...softseg.json => sub-queensland02_space-other_T2w_softseg.json} | 0 ...seg.nii.gz => sub-queensland02_space-other_T2w_softseg.nii.gz} | 0 ...=> sub-queensland03_flip-1_mt-on_space-other_MTS_softseg.json} | 0 ... sub-queensland03_flip-1_mt-on_space-other_MTS_softseg.nii.gz} | 0 ...> sub-queensland03_flip-2_mt-off_space-other_MTS_softseg.json} | 0 ...sub-queensland03_flip-2_mt-off_space-other_MTS_softseg.nii.gz} | 0 ...softseg.json => sub-queensland03_space-other_T1w_softseg.json} | 0 ...seg.nii.gz => sub-queensland03_space-other_T1w_softseg.nii.gz} | 0 ...tseg.json => sub-queensland03_space-other_T2star_softseg.json} | 0 ....nii.gz => sub-queensland03_space-other_T2star_softseg.nii.gz} | 0 ...softseg.json => sub-queensland03_space-other_T2w_softseg.json} | 0 ...seg.nii.gz => sub-queensland03_space-other_T2w_softseg.nii.gz} | 0 ...=> sub-queensland04_flip-1_mt-on_space-other_MTS_softseg.json} | 0 ... sub-queensland04_flip-1_mt-on_space-other_MTS_softseg.nii.gz} | 0 ...> sub-queensland04_flip-2_mt-off_space-other_MTS_softseg.json} | 0 ...sub-queensland04_flip-2_mt-off_space-other_MTS_softseg.nii.gz} | 0 ...softseg.json => sub-queensland04_space-other_T1w_softseg.json} | 0 ...seg.nii.gz => sub-queensland04_space-other_T1w_softseg.nii.gz} | 0 ...tseg.json => sub-queensland04_space-other_T2star_softseg.json} | 0 ....nii.gz => sub-queensland04_space-other_T2star_softseg.nii.gz} | 0 ...softseg.json => sub-queensland04_space-other_T2w_softseg.json} | 0 ...seg.nii.gz => sub-queensland04_space-other_T2w_softseg.nii.gz} | 0 ...=> sub-queensland05_flip-1_mt-on_space-other_MTS_softseg.json} | 0 ... sub-queensland05_flip-1_mt-on_space-other_MTS_softseg.nii.gz} | 0 ...> sub-queensland05_flip-2_mt-off_space-other_MTS_softseg.json} | 0 ...sub-queensland05_flip-2_mt-off_space-other_MTS_softseg.nii.gz} | 0 ...softseg.json => sub-queensland05_space-other_T1w_softseg.json} | 0 ...seg.nii.gz => sub-queensland05_space-other_T1w_softseg.nii.gz} | 0 ...tseg.json => sub-queensland05_space-other_T2star_softseg.json} | 0 ....nii.gz => sub-queensland05_space-other_T2star_softseg.nii.gz} | 0 ...softseg.json => sub-queensland05_space-other_T2w_softseg.json} | 0 ...seg.nii.gz => sub-queensland05_space-other_T2w_softseg.nii.gz} | 0 ...=> sub-queensland06_flip-1_mt-on_space-other_MTS_softseg.json} | 0 ... sub-queensland06_flip-1_mt-on_space-other_MTS_softseg.nii.gz} | 0 ...> sub-queensland06_flip-2_mt-off_space-other_MTS_softseg.json} | 0 ...sub-queensland06_flip-2_mt-off_space-other_MTS_softseg.nii.gz} | 0 ...softseg.json => sub-queensland06_space-other_T1w_softseg.json} | 0 ...seg.nii.gz => sub-queensland06_space-other_T1w_softseg.nii.gz} | 0 ...tseg.json => sub-queensland06_space-other_T2star_softseg.json} | 0 ....nii.gz => sub-queensland06_space-other_T2star_softseg.nii.gz} | 0 ...softseg.json => sub-queensland06_space-other_T2w_softseg.json} | 0 ...seg.nii.gz => sub-queensland06_space-other_T2w_softseg.nii.gz} | 0 ...=> sub-sherbrooke01_flip-1_mt-on_space-other_MTS_softseg.json} | 0 ... sub-sherbrooke01_flip-1_mt-on_space-other_MTS_softseg.nii.gz} | 0 ...> sub-sherbrooke01_flip-2_mt-off_space-other_MTS_softseg.json} | 0 ...sub-sherbrooke01_flip-2_mt-off_space-other_MTS_softseg.nii.gz} | 0 ...softseg.json => sub-sherbrooke01_space-other_T1w_softseg.json} | 0 ...seg.nii.gz => sub-sherbrooke01_space-other_T1w_softseg.nii.gz} | 0 ...tseg.json => sub-sherbrooke01_space-other_T2star_softseg.json} | 0 ....nii.gz => sub-sherbrooke01_space-other_T2star_softseg.nii.gz} | 0 ...softseg.json => sub-sherbrooke01_space-other_T2w_softseg.json} | 0 ...seg.nii.gz => sub-sherbrooke01_space-other_T2w_softseg.nii.gz} | 0 ...=> sub-sherbrooke02_flip-1_mt-on_space-other_MTS_softseg.json} | 0 ... sub-sherbrooke02_flip-1_mt-on_space-other_MTS_softseg.nii.gz} | 0 ...> sub-sherbrooke02_flip-2_mt-off_space-other_MTS_softseg.json} | 0 ...sub-sherbrooke02_flip-2_mt-off_space-other_MTS_softseg.nii.gz} | 0 ...softseg.json => sub-sherbrooke02_space-other_T1w_softseg.json} | 0 ...seg.nii.gz => sub-sherbrooke02_space-other_T1w_softseg.nii.gz} | 0 ...tseg.json => sub-sherbrooke02_space-other_T2star_softseg.json} | 0 ....nii.gz => sub-sherbrooke02_space-other_T2star_softseg.nii.gz} | 0 ...softseg.json => sub-sherbrooke02_space-other_T2w_softseg.json} | 0 ...seg.nii.gz => sub-sherbrooke02_space-other_T2w_softseg.nii.gz} | 0 ...=> sub-sherbrooke03_flip-1_mt-on_space-other_MTS_softseg.json} | 0 ... sub-sherbrooke03_flip-1_mt-on_space-other_MTS_softseg.nii.gz} | 0 ...> sub-sherbrooke03_flip-2_mt-off_space-other_MTS_softseg.json} | 0 ...sub-sherbrooke03_flip-2_mt-off_space-other_MTS_softseg.nii.gz} | 0 ...softseg.json => sub-sherbrooke03_space-other_T1w_softseg.json} | 0 ...seg.nii.gz => sub-sherbrooke03_space-other_T1w_softseg.nii.gz} | 0 ...tseg.json => sub-sherbrooke03_space-other_T2star_softseg.json} | 0 ....nii.gz => sub-sherbrooke03_space-other_T2star_softseg.nii.gz} | 0 ...softseg.json => sub-sherbrooke03_space-other_T2w_softseg.json} | 0 ...seg.nii.gz => sub-sherbrooke03_space-other_T2w_softseg.nii.gz} | 0 ...=> sub-sherbrooke04_flip-1_mt-on_space-other_MTS_softseg.json} | 0 ... sub-sherbrooke04_flip-1_mt-on_space-other_MTS_softseg.nii.gz} | 0 ...> sub-sherbrooke04_flip-2_mt-off_space-other_MTS_softseg.json} | 0 ...sub-sherbrooke04_flip-2_mt-off_space-other_MTS_softseg.nii.gz} | 0 ...softseg.json => sub-sherbrooke04_space-other_T1w_softseg.json} | 0 ...seg.nii.gz => sub-sherbrooke04_space-other_T1w_softseg.nii.gz} | 0 ...tseg.json => sub-sherbrooke04_space-other_T2star_softseg.json} | 0 ....nii.gz => sub-sherbrooke04_space-other_T2star_softseg.nii.gz} | 0 ...softseg.json => sub-sherbrooke04_space-other_T2w_softseg.json} | 0 ...seg.nii.gz => sub-sherbrooke04_space-other_T2w_softseg.nii.gz} | 0 ...=> sub-sherbrooke05_flip-1_mt-on_space-other_MTS_softseg.json} | 0 ... sub-sherbrooke05_flip-1_mt-on_space-other_MTS_softseg.nii.gz} | 0 ...> sub-sherbrooke05_flip-2_mt-off_space-other_MTS_softseg.json} | 0 ...sub-sherbrooke05_flip-2_mt-off_space-other_MTS_softseg.nii.gz} | 0 ...softseg.json => sub-sherbrooke05_space-other_T1w_softseg.json} | 0 ...seg.nii.gz => sub-sherbrooke05_space-other_T1w_softseg.nii.gz} | 0 ...tseg.json => sub-sherbrooke05_space-other_T2star_softseg.json} | 0 ....nii.gz => sub-sherbrooke05_space-other_T2star_softseg.nii.gz} | 0 ...softseg.json => sub-sherbrooke05_space-other_T2w_softseg.json} | 0 ...seg.nii.gz => sub-sherbrooke05_space-other_T2w_softseg.nii.gz} | 0 ...=> sub-sherbrooke06_flip-1_mt-on_space-other_MTS_softseg.json} | 0 ... sub-sherbrooke06_flip-1_mt-on_space-other_MTS_softseg.nii.gz} | 0 ...> sub-sherbrooke06_flip-2_mt-off_space-other_MTS_softseg.json} | 0 ...sub-sherbrooke06_flip-2_mt-off_space-other_MTS_softseg.nii.gz} | 0 ...softseg.json => sub-sherbrooke06_space-other_T1w_softseg.json} | 0 ...seg.nii.gz => sub-sherbrooke06_space-other_T1w_softseg.nii.gz} | 0 ...tseg.json => sub-sherbrooke06_space-other_T2star_softseg.json} | 0 ....nii.gz => sub-sherbrooke06_space-other_T2star_softseg.nii.gz} | 0 ...softseg.json => sub-sherbrooke06_space-other_T2w_softseg.json} | 0 ...seg.nii.gz => sub-sherbrooke06_space-other_T2w_softseg.nii.gz} | 0 ...=> sub-sherbrooke07_flip-1_mt-on_space-other_MTS_softseg.json} | 0 ... sub-sherbrooke07_flip-1_mt-on_space-other_MTS_softseg.nii.gz} | 0 ...> sub-sherbrooke07_flip-2_mt-off_space-other_MTS_softseg.json} | 0 ...sub-sherbrooke07_flip-2_mt-off_space-other_MTS_softseg.nii.gz} | 0 ...softseg.json => sub-sherbrooke07_space-other_T1w_softseg.json} | 0 ...seg.nii.gz => sub-sherbrooke07_space-other_T1w_softseg.nii.gz} | 0 ...tseg.json => sub-sherbrooke07_space-other_T2star_softseg.json} | 0 ....nii.gz => sub-sherbrooke07_space-other_T2star_softseg.nii.gz} | 0 ...softseg.json => sub-sherbrooke07_space-other_T2w_softseg.json} | 0 ...seg.nii.gz => sub-sherbrooke07_space-other_T2w_softseg.nii.gz} | 0 ...n => sub-stanford01_flip-1_mt-on_space-other_MTS_softseg.json} | 0 ...=> sub-stanford01_flip-1_mt-on_space-other_MTS_softseg.nii.gz} | 0 ... => sub-stanford01_flip-2_mt-off_space-other_MTS_softseg.json} | 0 ...> sub-stanford01_flip-2_mt-off_space-other_MTS_softseg.nii.gz} | 0 ...w_softseg.json => sub-stanford01_space-other_T1w_softseg.json} | 0 ...ftseg.nii.gz => sub-stanford01_space-other_T1w_softseg.nii.gz} | 0 ...oftseg.json => sub-stanford01_space-other_T2star_softseg.json} | 0 ...eg.nii.gz => sub-stanford01_space-other_T2star_softseg.nii.gz} | 0 ...S_softseg.json => sub-stanford01_space-other_T2w_softseg.json} | 0 ...ftseg.nii.gz => sub-stanford01_space-other_T2w_softseg.nii.gz} | 0 ...n => sub-stanford02_flip-1_mt-on_space-other_MTS_softseg.json} | 0 ...=> sub-stanford02_flip-1_mt-on_space-other_MTS_softseg.nii.gz} | 0 ... => sub-stanford02_flip-2_mt-off_space-other_MTS_softseg.json} | 0 ...> sub-stanford02_flip-2_mt-off_space-other_MTS_softseg.nii.gz} | 0 ...w_softseg.json => sub-stanford02_space-other_T1w_softseg.json} | 0 ...ftseg.nii.gz => sub-stanford02_space-other_T1w_softseg.nii.gz} | 0 ...oftseg.json => sub-stanford02_space-other_T2star_softseg.json} | 0 ...eg.nii.gz => sub-stanford02_space-other_T2star_softseg.nii.gz} | 0 ...S_softseg.json => sub-stanford02_space-other_T2w_softseg.json} | 0 ...ftseg.nii.gz => sub-stanford02_space-other_T2w_softseg.nii.gz} | 0 ...n => sub-stanford03_flip-1_mt-on_space-other_MTS_softseg.json} | 0 ...=> sub-stanford03_flip-1_mt-on_space-other_MTS_softseg.nii.gz} | 0 ... => sub-stanford03_flip-2_mt-off_space-other_MTS_softseg.json} | 0 ...> sub-stanford03_flip-2_mt-off_space-other_MTS_softseg.nii.gz} | 0 ...w_softseg.json => sub-stanford03_space-other_T1w_softseg.json} | 0 ...ftseg.nii.gz => sub-stanford03_space-other_T1w_softseg.nii.gz} | 0 ...oftseg.json => sub-stanford03_space-other_T2star_softseg.json} | 0 ...eg.nii.gz => sub-stanford03_space-other_T2star_softseg.nii.gz} | 0 ...S_softseg.json => sub-stanford03_space-other_T2w_softseg.json} | 0 ...ftseg.nii.gz => sub-stanford03_space-other_T2w_softseg.nii.gz} | 0 ...n => sub-stanford04_flip-1_mt-on_space-other_MTS_softseg.json} | 0 ...=> sub-stanford04_flip-1_mt-on_space-other_MTS_softseg.nii.gz} | 0 ... => sub-stanford04_flip-2_mt-off_space-other_MTS_softseg.json} | 0 ...> sub-stanford04_flip-2_mt-off_space-other_MTS_softseg.nii.gz} | 0 ...w_softseg.json => sub-stanford04_space-other_T1w_softseg.json} | 0 ...ftseg.nii.gz => sub-stanford04_space-other_T1w_softseg.nii.gz} | 0 ...oftseg.json => sub-stanford04_space-other_T2star_softseg.json} | 0 ...eg.nii.gz => sub-stanford04_space-other_T2star_softseg.nii.gz} | 0 ...S_softseg.json => sub-stanford04_space-other_T2w_softseg.json} | 0 ...ftseg.nii.gz => sub-stanford04_space-other_T2w_softseg.nii.gz} | 0 ...n => sub-stanford05_flip-1_mt-on_space-other_MTS_softseg.json} | 0 ...=> sub-stanford05_flip-1_mt-on_space-other_MTS_softseg.nii.gz} | 0 ... => sub-stanford05_flip-2_mt-off_space-other_MTS_softseg.json} | 0 ...> sub-stanford05_flip-2_mt-off_space-other_MTS_softseg.nii.gz} | 0 ...w_softseg.json => sub-stanford05_space-other_T1w_softseg.json} | 0 ...ftseg.nii.gz => sub-stanford05_space-other_T1w_softseg.nii.gz} | 0 ...oftseg.json => sub-stanford05_space-other_T2star_softseg.json} | 0 ...eg.nii.gz => sub-stanford05_space-other_T2star_softseg.nii.gz} | 0 ...S_softseg.json => sub-stanford05_space-other_T2w_softseg.json} | 0 ...ftseg.nii.gz => sub-stanford05_space-other_T2w_softseg.nii.gz} | 0 ...n => sub-stanford06_flip-1_mt-on_space-other_MTS_softseg.json} | 0 ...=> sub-stanford06_flip-1_mt-on_space-other_MTS_softseg.nii.gz} | 0 ... => sub-stanford06_flip-2_mt-off_space-other_MTS_softseg.json} | 0 ...> sub-stanford06_flip-2_mt-off_space-other_MTS_softseg.nii.gz} | 0 ...w_softseg.json => sub-stanford06_space-other_T1w_softseg.json} | 0 ...ftseg.nii.gz => sub-stanford06_space-other_T1w_softseg.nii.gz} | 0 ...oftseg.json => sub-stanford06_space-other_T2star_softseg.json} | 0 ...eg.nii.gz => sub-stanford06_space-other_T2star_softseg.nii.gz} | 0 ...S_softseg.json => sub-stanford06_space-other_T2w_softseg.json} | 0 ...ftseg.nii.gz => sub-stanford06_space-other_T2w_softseg.nii.gz} | 0 ...=> sub-strasbourg01_flip-1_mt-on_space-other_MTS_softseg.json} | 0 ... sub-strasbourg01_flip-1_mt-on_space-other_MTS_softseg.nii.gz} | 0 ...> sub-strasbourg01_flip-2_mt-off_space-other_MTS_softseg.json} | 0 ...sub-strasbourg01_flip-2_mt-off_space-other_MTS_softseg.nii.gz} | 0 ...softseg.json => sub-strasbourg01_space-other_T1w_softseg.json} | 0 ...seg.nii.gz => sub-strasbourg01_space-other_T1w_softseg.nii.gz} | 0 ...tseg.json => sub-strasbourg01_space-other_T2star_softseg.json} | 0 ....nii.gz => sub-strasbourg01_space-other_T2star_softseg.nii.gz} | 0 ...softseg.json => sub-strasbourg01_space-other_T2w_softseg.json} | 0 ...seg.nii.gz => sub-strasbourg01_space-other_T2w_softseg.nii.gz} | 0 ...=> sub-strasbourg02_flip-1_mt-on_space-other_MTS_softseg.json} | 0 ... sub-strasbourg02_flip-1_mt-on_space-other_MTS_softseg.nii.gz} | 0 ...> sub-strasbourg02_flip-2_mt-off_space-other_MTS_softseg.json} | 0 ...sub-strasbourg02_flip-2_mt-off_space-other_MTS_softseg.nii.gz} | 0 ...softseg.json => sub-strasbourg02_space-other_T1w_softseg.json} | 0 ...seg.nii.gz => sub-strasbourg02_space-other_T1w_softseg.nii.gz} | 0 ...tseg.json => sub-strasbourg02_space-other_T2star_softseg.json} | 0 ....nii.gz => sub-strasbourg02_space-other_T2star_softseg.nii.gz} | 0 ...softseg.json => sub-strasbourg02_space-other_T2w_softseg.json} | 0 ...seg.nii.gz => sub-strasbourg02_space-other_T2w_softseg.nii.gz} | 0 ...=> sub-strasbourg03_flip-1_mt-on_space-other_MTS_softseg.json} | 0 ... sub-strasbourg03_flip-1_mt-on_space-other_MTS_softseg.nii.gz} | 0 ...> sub-strasbourg03_flip-2_mt-off_space-other_MTS_softseg.json} | 0 ...sub-strasbourg03_flip-2_mt-off_space-other_MTS_softseg.nii.gz} | 0 ...softseg.json => sub-strasbourg03_space-other_T1w_softseg.json} | 0 ...seg.nii.gz => sub-strasbourg03_space-other_T1w_softseg.nii.gz} | 0 ...tseg.json => sub-strasbourg03_space-other_T2star_softseg.json} | 0 ....nii.gz => sub-strasbourg03_space-other_T2star_softseg.nii.gz} | 0 ...softseg.json => sub-strasbourg03_space-other_T2w_softseg.json} | 0 ...seg.nii.gz => sub-strasbourg03_space-other_T2w_softseg.nii.gz} | 0 ...=> sub-strasbourg04_flip-1_mt-on_space-other_MTS_softseg.json} | 0 ... sub-strasbourg04_flip-1_mt-on_space-other_MTS_softseg.nii.gz} | 0 ...> sub-strasbourg04_flip-2_mt-off_space-other_MTS_softseg.json} | 0 ...sub-strasbourg04_flip-2_mt-off_space-other_MTS_softseg.nii.gz} | 0 ...softseg.json => sub-strasbourg04_space-other_T1w_softseg.json} | 0 ...seg.nii.gz => sub-strasbourg04_space-other_T1w_softseg.nii.gz} | 0 ...tseg.json => sub-strasbourg04_space-other_T2star_softseg.json} | 0 ....nii.gz => sub-strasbourg04_space-other_T2star_softseg.nii.gz} | 0 ...softseg.json => sub-strasbourg04_space-other_T2w_softseg.json} | 0 ...seg.nii.gz => sub-strasbourg04_space-other_T2w_softseg.nii.gz} | 0 ...=> sub-strasbourg05_flip-1_mt-on_space-other_MTS_softseg.json} | 0 ... sub-strasbourg05_flip-1_mt-on_space-other_MTS_softseg.nii.gz} | 0 ...> sub-strasbourg05_flip-2_mt-off_space-other_MTS_softseg.json} | 0 ...sub-strasbourg05_flip-2_mt-off_space-other_MTS_softseg.nii.gz} | 0 ...softseg.json => sub-strasbourg05_space-other_T1w_softseg.json} | 0 ...seg.nii.gz => sub-strasbourg05_space-other_T1w_softseg.nii.gz} | 0 ...tseg.json => sub-strasbourg05_space-other_T2star_softseg.json} | 0 ....nii.gz => sub-strasbourg05_space-other_T2star_softseg.nii.gz} | 0 ...softseg.json => sub-strasbourg05_space-other_T2w_softseg.json} | 0 ...seg.nii.gz => sub-strasbourg05_space-other_T2w_softseg.nii.gz} | 0 ...=> sub-strasbourg06_flip-1_mt-on_space-other_MTS_softseg.json} | 0 ... sub-strasbourg06_flip-1_mt-on_space-other_MTS_softseg.nii.gz} | 0 ...> sub-strasbourg06_flip-2_mt-off_space-other_MTS_softseg.json} | 0 ...sub-strasbourg06_flip-2_mt-off_space-other_MTS_softseg.nii.gz} | 0 ...softseg.json => sub-strasbourg06_space-other_T1w_softseg.json} | 0 ...seg.nii.gz => sub-strasbourg06_space-other_T1w_softseg.nii.gz} | 0 ...tseg.json => sub-strasbourg06_space-other_T2star_softseg.json} | 0 ....nii.gz => sub-strasbourg06_space-other_T2star_softseg.nii.gz} | 0 ...softseg.json => sub-strasbourg06_space-other_T2w_softseg.json} | 0 ...seg.nii.gz => sub-strasbourg06_space-other_T2w_softseg.nii.gz} | 0 ...on => sub-tehranS01_flip-1_mt-on_space-other_MTS_softseg.json} | 0 ... => sub-tehranS01_flip-1_mt-on_space-other_MTS_softseg.nii.gz} | 0 ...n => sub-tehranS01_flip-2_mt-off_space-other_MTS_softseg.json} | 0 ...=> sub-tehranS01_flip-2_mt-off_space-other_MTS_softseg.nii.gz} | 0 ...2w_softseg.json => sub-tehranS01_space-other_T1w_softseg.json} | 0 ...oftseg.nii.gz => sub-tehranS01_space-other_T1w_softseg.nii.gz} | 0 ...softseg.json => sub-tehranS01_space-other_T2star_softseg.json} | 0 ...seg.nii.gz => sub-tehranS01_space-other_T2star_softseg.nii.gz} | 0 ...TS_softseg.json => sub-tehranS01_space-other_T2w_softseg.json} | 0 ...oftseg.nii.gz => sub-tehranS01_space-other_T2w_softseg.nii.gz} | 0 ...on => sub-tehranS02_flip-1_mt-on_space-other_MTS_softseg.json} | 0 ... => sub-tehranS02_flip-1_mt-on_space-other_MTS_softseg.nii.gz} | 0 ...n => sub-tehranS02_flip-2_mt-off_space-other_MTS_softseg.json} | 0 ...=> sub-tehranS02_flip-2_mt-off_space-other_MTS_softseg.nii.gz} | 0 ...2w_softseg.json => sub-tehranS02_space-other_T1w_softseg.json} | 0 ...oftseg.nii.gz => sub-tehranS02_space-other_T1w_softseg.nii.gz} | 0 ...softseg.json => sub-tehranS02_space-other_T2star_softseg.json} | 0 ...seg.nii.gz => sub-tehranS02_space-other_T2star_softseg.nii.gz} | 0 ...TS_softseg.json => sub-tehranS02_space-other_T2w_softseg.json} | 0 ...oftseg.nii.gz => sub-tehranS02_space-other_T2w_softseg.nii.gz} | 0 ...on => sub-tehranS03_flip-1_mt-on_space-other_MTS_softseg.json} | 0 ... => sub-tehranS03_flip-1_mt-on_space-other_MTS_softseg.nii.gz} | 0 ...n => sub-tehranS03_flip-2_mt-off_space-other_MTS_softseg.json} | 0 ...=> sub-tehranS03_flip-2_mt-off_space-other_MTS_softseg.nii.gz} | 0 ...2w_softseg.json => sub-tehranS03_space-other_T1w_softseg.json} | 0 ...oftseg.nii.gz => sub-tehranS03_space-other_T1w_softseg.nii.gz} | 0 ...softseg.json => sub-tehranS03_space-other_T2star_softseg.json} | 0 ...seg.nii.gz => sub-tehranS03_space-other_T2star_softseg.nii.gz} | 0 ...TS_softseg.json => sub-tehranS03_space-other_T2w_softseg.json} | 0 ...oftseg.nii.gz => sub-tehranS03_space-other_T2w_softseg.nii.gz} | 0 ...on => sub-tehranS04_flip-1_mt-on_space-other_MTS_softseg.json} | 0 ... => sub-tehranS04_flip-1_mt-on_space-other_MTS_softseg.nii.gz} | 0 ...n => sub-tehranS04_flip-2_mt-off_space-other_MTS_softseg.json} | 0 ...=> sub-tehranS04_flip-2_mt-off_space-other_MTS_softseg.nii.gz} | 0 ...2w_softseg.json => sub-tehranS04_space-other_T1w_softseg.json} | 0 ...oftseg.nii.gz => sub-tehranS04_space-other_T1w_softseg.nii.gz} | 0 ...softseg.json => sub-tehranS04_space-other_T2star_softseg.json} | 0 ...seg.nii.gz => sub-tehranS04_space-other_T2star_softseg.nii.gz} | 0 ...TS_softseg.json => sub-tehranS04_space-other_T2w_softseg.json} | 0 ...oftseg.nii.gz => sub-tehranS04_space-other_T2w_softseg.nii.gz} | 0 ...on => sub-tehranS05_flip-1_mt-on_space-other_MTS_softseg.json} | 0 ... => sub-tehranS05_flip-1_mt-on_space-other_MTS_softseg.nii.gz} | 0 ...n => sub-tehranS05_flip-2_mt-off_space-other_MTS_softseg.json} | 0 ...=> sub-tehranS05_flip-2_mt-off_space-other_MTS_softseg.nii.gz} | 0 ...2w_softseg.json => sub-tehranS05_space-other_T1w_softseg.json} | 0 ...oftseg.nii.gz => sub-tehranS05_space-other_T1w_softseg.nii.gz} | 0 ...softseg.json => sub-tehranS05_space-other_T2star_softseg.json} | 0 ...seg.nii.gz => sub-tehranS05_space-other_T2star_softseg.nii.gz} | 0 ...TS_softseg.json => sub-tehranS05_space-other_T2w_softseg.json} | 0 ...oftseg.nii.gz => sub-tehranS05_space-other_T2w_softseg.nii.gz} | 0 ...on => sub-tehranS06_flip-1_mt-on_space-other_MTS_softseg.json} | 0 ... => sub-tehranS06_flip-1_mt-on_space-other_MTS_softseg.nii.gz} | 0 ...n => sub-tehranS06_flip-2_mt-off_space-other_MTS_softseg.json} | 0 ...=> sub-tehranS06_flip-2_mt-off_space-other_MTS_softseg.nii.gz} | 0 ...2w_softseg.json => sub-tehranS06_space-other_T1w_softseg.json} | 0 ...oftseg.nii.gz => sub-tehranS06_space-other_T1w_softseg.nii.gz} | 0 ...softseg.json => sub-tehranS06_space-other_T2star_softseg.json} | 0 ...seg.nii.gz => sub-tehranS06_space-other_T2star_softseg.nii.gz} | 0 ...TS_softseg.json => sub-tehranS06_space-other_T2w_softseg.json} | 0 ...oftseg.nii.gz => sub-tehranS06_space-other_T2w_softseg.nii.gz} | 0 ... => sub-tokyo750w01_flip-1_mt-on_space-other_MTS_softseg.json} | 0 ...> sub-tokyo750w01_flip-1_mt-on_space-other_MTS_softseg.nii.gz} | 0 ...=> sub-tokyo750w01_flip-2_mt-off_space-other_MTS_softseg.json} | 0 ... sub-tokyo750w01_flip-2_mt-off_space-other_MTS_softseg.nii.gz} | 0 ..._softseg.json => sub-tokyo750w01_space-other_T1w_softseg.json} | 0 ...tseg.nii.gz => sub-tokyo750w01_space-other_T1w_softseg.nii.gz} | 0 ...ftseg.json => sub-tokyo750w01_space-other_T2star_softseg.json} | 0 ...g.nii.gz => sub-tokyo750w01_space-other_T2star_softseg.nii.gz} | 0 ..._softseg.json => sub-tokyo750w01_space-other_T2w_softseg.json} | 0 ...tseg.nii.gz => sub-tokyo750w01_space-other_T2w_softseg.nii.gz} | 0 ... => sub-tokyo750w02_flip-1_mt-on_space-other_MTS_softseg.json} | 0 ...> sub-tokyo750w02_flip-1_mt-on_space-other_MTS_softseg.nii.gz} | 0 ...=> sub-tokyo750w02_flip-2_mt-off_space-other_MTS_softseg.json} | 0 ... sub-tokyo750w02_flip-2_mt-off_space-other_MTS_softseg.nii.gz} | 0 ..._softseg.json => sub-tokyo750w02_space-other_T1w_softseg.json} | 0 ...tseg.nii.gz => sub-tokyo750w02_space-other_T1w_softseg.nii.gz} | 0 ...ftseg.json => sub-tokyo750w02_space-other_T2star_softseg.json} | 0 ...g.nii.gz => sub-tokyo750w02_space-other_T2star_softseg.nii.gz} | 0 ..._softseg.json => sub-tokyo750w02_space-other_T2w_softseg.json} | 0 ...tseg.nii.gz => sub-tokyo750w02_space-other_T2w_softseg.nii.gz} | 0 ... => sub-tokyo750w03_flip-1_mt-on_space-other_MTS_softseg.json} | 0 ...> sub-tokyo750w03_flip-1_mt-on_space-other_MTS_softseg.nii.gz} | 0 ...=> sub-tokyo750w03_flip-2_mt-off_space-other_MTS_softseg.json} | 0 ... sub-tokyo750w03_flip-2_mt-off_space-other_MTS_softseg.nii.gz} | 0 ..._softseg.json => sub-tokyo750w03_space-other_T1w_softseg.json} | 0 ...tseg.nii.gz => sub-tokyo750w03_space-other_T1w_softseg.nii.gz} | 0 ...ftseg.json => sub-tokyo750w03_space-other_T2star_softseg.json} | 0 ...g.nii.gz => sub-tokyo750w03_space-other_T2star_softseg.nii.gz} | 0 ..._softseg.json => sub-tokyo750w03_space-other_T2w_softseg.json} | 0 ...tseg.nii.gz => sub-tokyo750w03_space-other_T2w_softseg.nii.gz} | 0 ... => sub-tokyo750w04_flip-1_mt-on_space-other_MTS_softseg.json} | 0 ...> sub-tokyo750w04_flip-1_mt-on_space-other_MTS_softseg.nii.gz} | 0 ...=> sub-tokyo750w04_flip-2_mt-off_space-other_MTS_softseg.json} | 0 ... sub-tokyo750w04_flip-2_mt-off_space-other_MTS_softseg.nii.gz} | 0 ..._softseg.json => sub-tokyo750w04_space-other_T1w_softseg.json} | 0 ...tseg.nii.gz => sub-tokyo750w04_space-other_T1w_softseg.nii.gz} | 0 ...ftseg.json => sub-tokyo750w04_space-other_T2star_softseg.json} | 0 ...g.nii.gz => sub-tokyo750w04_space-other_T2star_softseg.nii.gz} | 0 ..._softseg.json => sub-tokyo750w04_space-other_T2w_softseg.json} | 0 ...tseg.nii.gz => sub-tokyo750w04_space-other_T2w_softseg.nii.gz} | 0 ... => sub-tokyo750w05_flip-1_mt-on_space-other_MTS_softseg.json} | 0 ...> sub-tokyo750w05_flip-1_mt-on_space-other_MTS_softseg.nii.gz} | 0 ...=> sub-tokyo750w05_flip-2_mt-off_space-other_MTS_softseg.json} | 0 ... sub-tokyo750w05_flip-2_mt-off_space-other_MTS_softseg.nii.gz} | 0 ..._softseg.json => sub-tokyo750w05_space-other_T1w_softseg.json} | 0 ...tseg.nii.gz => sub-tokyo750w05_space-other_T1w_softseg.nii.gz} | 0 ...ftseg.json => sub-tokyo750w05_space-other_T2star_softseg.json} | 0 ...g.nii.gz => sub-tokyo750w05_space-other_T2star_softseg.nii.gz} | 0 ..._softseg.json => sub-tokyo750w05_space-other_T2w_softseg.json} | 0 ...tseg.nii.gz => sub-tokyo750w05_space-other_T2w_softseg.nii.gz} | 0 ... => sub-tokyo750w06_flip-1_mt-on_space-other_MTS_softseg.json} | 0 ...> sub-tokyo750w06_flip-1_mt-on_space-other_MTS_softseg.nii.gz} | 0 ...=> sub-tokyo750w06_flip-2_mt-off_space-other_MTS_softseg.json} | 0 ... sub-tokyo750w06_flip-2_mt-off_space-other_MTS_softseg.nii.gz} | 0 ..._softseg.json => sub-tokyo750w06_space-other_T1w_softseg.json} | 0 ...tseg.nii.gz => sub-tokyo750w06_space-other_T1w_softseg.nii.gz} | 0 ...ftseg.json => sub-tokyo750w06_space-other_T2star_softseg.json} | 0 ...g.nii.gz => sub-tokyo750w06_space-other_T2star_softseg.nii.gz} | 0 ..._softseg.json => sub-tokyo750w06_space-other_T2w_softseg.json} | 0 ...tseg.nii.gz => sub-tokyo750w06_space-other_T2w_softseg.nii.gz} | 0 ... => sub-tokyo750w07_flip-1_mt-on_space-other_MTS_softseg.json} | 0 ...> sub-tokyo750w07_flip-1_mt-on_space-other_MTS_softseg.nii.gz} | 0 ...=> sub-tokyo750w07_flip-2_mt-off_space-other_MTS_softseg.json} | 0 ... sub-tokyo750w07_flip-2_mt-off_space-other_MTS_softseg.nii.gz} | 0 ..._softseg.json => sub-tokyo750w07_space-other_T1w_softseg.json} | 0 ...tseg.nii.gz => sub-tokyo750w07_space-other_T1w_softseg.nii.gz} | 0 ...ftseg.json => sub-tokyo750w07_space-other_T2star_softseg.json} | 0 ...g.nii.gz => sub-tokyo750w07_space-other_T2star_softseg.nii.gz} | 0 ..._softseg.json => sub-tokyo750w07_space-other_T2w_softseg.json} | 0 ...tseg.nii.gz => sub-tokyo750w07_space-other_T2w_softseg.nii.gz} | 0 ... sub-tokyoIngenia01_flip-1_mt-on_space-other_MTS_softseg.json} | 0 ...ub-tokyoIngenia01_flip-1_mt-on_space-other_MTS_softseg.nii.gz} | 0 ...sub-tokyoIngenia01_flip-2_mt-off_space-other_MTS_softseg.json} | 0 ...b-tokyoIngenia01_flip-2_mt-off_space-other_MTS_softseg.nii.gz} | 0 ...ftseg.json => sub-tokyoIngenia01_space-other_T1w_softseg.json} | 0 ...g.nii.gz => sub-tokyoIngenia01_space-other_T1w_softseg.nii.gz} | 0 ...eg.json => sub-tokyoIngenia01_space-other_T2star_softseg.json} | 0 ...ii.gz => sub-tokyoIngenia01_space-other_T2star_softseg.nii.gz} | 0 ...ftseg.json => sub-tokyoIngenia01_space-other_T2w_softseg.json} | 0 ...g.nii.gz => sub-tokyoIngenia01_space-other_T2w_softseg.nii.gz} | 0 ... sub-tokyoIngenia02_flip-1_mt-on_space-other_MTS_softseg.json} | 0 ...ub-tokyoIngenia02_flip-1_mt-on_space-other_MTS_softseg.nii.gz} | 0 ...sub-tokyoIngenia02_flip-2_mt-off_space-other_MTS_softseg.json} | 0 ...b-tokyoIngenia02_flip-2_mt-off_space-other_MTS_softseg.nii.gz} | 0 ...ftseg.json => sub-tokyoIngenia02_space-other_T1w_softseg.json} | 0 ...g.nii.gz => sub-tokyoIngenia02_space-other_T1w_softseg.nii.gz} | 0 ...eg.json => sub-tokyoIngenia02_space-other_T2star_softseg.json} | 0 ...ii.gz => sub-tokyoIngenia02_space-other_T2star_softseg.nii.gz} | 0 ...ftseg.json => sub-tokyoIngenia02_space-other_T2w_softseg.json} | 0 ...g.nii.gz => sub-tokyoIngenia02_space-other_T2w_softseg.nii.gz} | 0 ... sub-tokyoIngenia03_flip-1_mt-on_space-other_MTS_softseg.json} | 0 ...ub-tokyoIngenia03_flip-1_mt-on_space-other_MTS_softseg.nii.gz} | 0 ...sub-tokyoIngenia03_flip-2_mt-off_space-other_MTS_softseg.json} | 0 ...b-tokyoIngenia03_flip-2_mt-off_space-other_MTS_softseg.nii.gz} | 0 ...ftseg.json => sub-tokyoIngenia03_space-other_T1w_softseg.json} | 0 ...g.nii.gz => sub-tokyoIngenia03_space-other_T1w_softseg.nii.gz} | 0 ...eg.json => sub-tokyoIngenia03_space-other_T2star_softseg.json} | 0 ...ii.gz => sub-tokyoIngenia03_space-other_T2star_softseg.nii.gz} | 0 ...ftseg.json => sub-tokyoIngenia03_space-other_T2w_softseg.json} | 0 ...g.nii.gz => sub-tokyoIngenia03_space-other_T2w_softseg.nii.gz} | 0 ... sub-tokyoIngenia04_flip-1_mt-on_space-other_MTS_softseg.json} | 0 ...ub-tokyoIngenia04_flip-1_mt-on_space-other_MTS_softseg.nii.gz} | 0 ...sub-tokyoIngenia04_flip-2_mt-off_space-other_MTS_softseg.json} | 0 ...b-tokyoIngenia04_flip-2_mt-off_space-other_MTS_softseg.nii.gz} | 0 ...ftseg.json => sub-tokyoIngenia04_space-other_T1w_softseg.json} | 0 ...g.nii.gz => sub-tokyoIngenia04_space-other_T1w_softseg.nii.gz} | 0 ...eg.json => sub-tokyoIngenia04_space-other_T2star_softseg.json} | 0 ...ii.gz => sub-tokyoIngenia04_space-other_T2star_softseg.nii.gz} | 0 ...ftseg.json => sub-tokyoIngenia04_space-other_T2w_softseg.json} | 0 ...g.nii.gz => sub-tokyoIngenia04_space-other_T2w_softseg.nii.gz} | 0 ... sub-tokyoIngenia05_flip-1_mt-on_space-other_MTS_softseg.json} | 0 ...ub-tokyoIngenia05_flip-1_mt-on_space-other_MTS_softseg.nii.gz} | 0 ...sub-tokyoIngenia05_flip-2_mt-off_space-other_MTS_softseg.json} | 0 ...b-tokyoIngenia05_flip-2_mt-off_space-other_MTS_softseg.nii.gz} | 0 ...ftseg.json => sub-tokyoIngenia05_space-other_T1w_softseg.json} | 0 ...g.nii.gz => sub-tokyoIngenia05_space-other_T1w_softseg.nii.gz} | 0 ...eg.json => sub-tokyoIngenia05_space-other_T2star_softseg.json} | 0 ...ii.gz => sub-tokyoIngenia05_space-other_T2star_softseg.nii.gz} | 0 ...ftseg.json => sub-tokyoIngenia05_space-other_T2w_softseg.json} | 0 ...g.nii.gz => sub-tokyoIngenia05_space-other_T2w_softseg.nii.gz} | 0 ... sub-tokyoIngenia06_flip-1_mt-on_space-other_MTS_softseg.json} | 0 ...ub-tokyoIngenia06_flip-1_mt-on_space-other_MTS_softseg.nii.gz} | 0 ...sub-tokyoIngenia06_flip-2_mt-off_space-other_MTS_softseg.json} | 0 ...b-tokyoIngenia06_flip-2_mt-off_space-other_MTS_softseg.nii.gz} | 0 ...ftseg.json => sub-tokyoIngenia06_space-other_T1w_softseg.json} | 0 ...g.nii.gz => sub-tokyoIngenia06_space-other_T1w_softseg.nii.gz} | 0 ...eg.json => sub-tokyoIngenia06_space-other_T2star_softseg.json} | 0 ...ii.gz => sub-tokyoIngenia06_space-other_T2star_softseg.nii.gz} | 0 ...ftseg.json => sub-tokyoIngenia06_space-other_T2w_softseg.json} | 0 ...g.nii.gz => sub-tokyoIngenia06_space-other_T2w_softseg.nii.gz} | 0 ... sub-tokyoIngenia07_flip-1_mt-on_space-other_MTS_softseg.json} | 0 ...ub-tokyoIngenia07_flip-1_mt-on_space-other_MTS_softseg.nii.gz} | 0 ...sub-tokyoIngenia07_flip-2_mt-off_space-other_MTS_softseg.json} | 0 ...b-tokyoIngenia07_flip-2_mt-off_space-other_MTS_softseg.nii.gz} | 0 ...ftseg.json => sub-tokyoIngenia07_space-other_T1w_softseg.json} | 0 ...g.nii.gz => sub-tokyoIngenia07_space-other_T1w_softseg.nii.gz} | 0 ...eg.json => sub-tokyoIngenia07_space-other_T2star_softseg.json} | 0 ...ii.gz => sub-tokyoIngenia07_space-other_T2star_softseg.nii.gz} | 0 ...ftseg.json => sub-tokyoIngenia07_space-other_T2w_softseg.json} | 0 ...g.nii.gz => sub-tokyoIngenia07_space-other_T2w_softseg.nii.gz} | 0 ...=> sub-tokyoSkyra01_flip-1_mt-on_space-other_MTS_softseg.json} | 0 ... sub-tokyoSkyra01_flip-1_mt-on_space-other_MTS_softseg.nii.gz} | 0 ...> sub-tokyoSkyra01_flip-2_mt-off_space-other_MTS_softseg.json} | 0 ...sub-tokyoSkyra01_flip-2_mt-off_space-other_MTS_softseg.nii.gz} | 0 ...softseg.json => sub-tokyoSkyra01_space-other_T1w_softseg.json} | 0 ...seg.nii.gz => sub-tokyoSkyra01_space-other_T1w_softseg.nii.gz} | 0 ...tseg.json => sub-tokyoSkyra01_space-other_T2star_softseg.json} | 0 ....nii.gz => sub-tokyoSkyra01_space-other_T2star_softseg.nii.gz} | 0 ...softseg.json => sub-tokyoSkyra01_space-other_T2w_softseg.json} | 0 ...seg.nii.gz => sub-tokyoSkyra01_space-other_T2w_softseg.nii.gz} | 0 ...=> sub-tokyoSkyra02_flip-1_mt-on_space-other_MTS_softseg.json} | 0 ... sub-tokyoSkyra02_flip-1_mt-on_space-other_MTS_softseg.nii.gz} | 0 ...> sub-tokyoSkyra02_flip-2_mt-off_space-other_MTS_softseg.json} | 0 ...sub-tokyoSkyra02_flip-2_mt-off_space-other_MTS_softseg.nii.gz} | 0 ...softseg.json => sub-tokyoSkyra02_space-other_T1w_softseg.json} | 0 ...seg.nii.gz => sub-tokyoSkyra02_space-other_T1w_softseg.nii.gz} | 0 ...tseg.json => sub-tokyoSkyra02_space-other_T2star_softseg.json} | 0 ....nii.gz => sub-tokyoSkyra02_space-other_T2star_softseg.nii.gz} | 0 ...softseg.json => sub-tokyoSkyra02_space-other_T2w_softseg.json} | 0 ...seg.nii.gz => sub-tokyoSkyra02_space-other_T2w_softseg.nii.gz} | 0 ...=> sub-tokyoSkyra03_flip-1_mt-on_space-other_MTS_softseg.json} | 0 ... sub-tokyoSkyra03_flip-1_mt-on_space-other_MTS_softseg.nii.gz} | 0 ...> sub-tokyoSkyra03_flip-2_mt-off_space-other_MTS_softseg.json} | 0 ...sub-tokyoSkyra03_flip-2_mt-off_space-other_MTS_softseg.nii.gz} | 0 ...softseg.json => sub-tokyoSkyra03_space-other_T1w_softseg.json} | 0 ...seg.nii.gz => sub-tokyoSkyra03_space-other_T1w_softseg.nii.gz} | 0 ...tseg.json => sub-tokyoSkyra03_space-other_T2star_softseg.json} | 0 ....nii.gz => sub-tokyoSkyra03_space-other_T2star_softseg.nii.gz} | 0 ...softseg.json => sub-tokyoSkyra03_space-other_T2w_softseg.json} | 0 ...seg.nii.gz => sub-tokyoSkyra03_space-other_T2w_softseg.nii.gz} | 0 ...=> sub-tokyoSkyra04_flip-1_mt-on_space-other_MTS_softseg.json} | 0 ... sub-tokyoSkyra04_flip-1_mt-on_space-other_MTS_softseg.nii.gz} | 0 ...> sub-tokyoSkyra04_flip-2_mt-off_space-other_MTS_softseg.json} | 0 ...sub-tokyoSkyra04_flip-2_mt-off_space-other_MTS_softseg.nii.gz} | 0 ...softseg.json => sub-tokyoSkyra04_space-other_T1w_softseg.json} | 0 ...seg.nii.gz => sub-tokyoSkyra04_space-other_T1w_softseg.nii.gz} | 0 ...tseg.json => sub-tokyoSkyra04_space-other_T2star_softseg.json} | 0 ....nii.gz => sub-tokyoSkyra04_space-other_T2star_softseg.nii.gz} | 0 ...softseg.json => sub-tokyoSkyra04_space-other_T2w_softseg.json} | 0 ...seg.nii.gz => sub-tokyoSkyra04_space-other_T2w_softseg.nii.gz} | 0 ...=> sub-tokyoSkyra05_flip-1_mt-on_space-other_MTS_softseg.json} | 0 ... sub-tokyoSkyra05_flip-1_mt-on_space-other_MTS_softseg.nii.gz} | 0 ...> sub-tokyoSkyra05_flip-2_mt-off_space-other_MTS_softseg.json} | 0 ...sub-tokyoSkyra05_flip-2_mt-off_space-other_MTS_softseg.nii.gz} | 0 ...softseg.json => sub-tokyoSkyra05_space-other_T1w_softseg.json} | 0 ...seg.nii.gz => sub-tokyoSkyra05_space-other_T1w_softseg.nii.gz} | 0 ...tseg.json => sub-tokyoSkyra05_space-other_T2star_softseg.json} | 0 ....nii.gz => sub-tokyoSkyra05_space-other_T2star_softseg.nii.gz} | 0 ...softseg.json => sub-tokyoSkyra05_space-other_T2w_softseg.json} | 0 ...seg.nii.gz => sub-tokyoSkyra05_space-other_T2w_softseg.nii.gz} | 0 ...=> sub-tokyoSkyra06_flip-1_mt-on_space-other_MTS_softseg.json} | 0 ... sub-tokyoSkyra06_flip-1_mt-on_space-other_MTS_softseg.nii.gz} | 0 ...> sub-tokyoSkyra06_flip-2_mt-off_space-other_MTS_softseg.json} | 0 ...sub-tokyoSkyra06_flip-2_mt-off_space-other_MTS_softseg.nii.gz} | 0 ...softseg.json => sub-tokyoSkyra06_space-other_T1w_softseg.json} | 0 ...seg.nii.gz => sub-tokyoSkyra06_space-other_T1w_softseg.nii.gz} | 0 ...tseg.json => sub-tokyoSkyra06_space-other_T2star_softseg.json} | 0 ....nii.gz => sub-tokyoSkyra06_space-other_T2star_softseg.nii.gz} | 0 ...softseg.json => sub-tokyoSkyra06_space-other_T2w_softseg.json} | 0 ...seg.nii.gz => sub-tokyoSkyra06_space-other_T2w_softseg.nii.gz} | 0 ...=> sub-tokyoSkyra07_flip-1_mt-on_space-other_MTS_softseg.json} | 0 ... sub-tokyoSkyra07_flip-1_mt-on_space-other_MTS_softseg.nii.gz} | 0 ...> sub-tokyoSkyra07_flip-2_mt-off_space-other_MTS_softseg.json} | 0 ...sub-tokyoSkyra07_flip-2_mt-off_space-other_MTS_softseg.nii.gz} | 0 ...softseg.json => sub-tokyoSkyra07_space-other_T1w_softseg.json} | 0 ...seg.nii.gz => sub-tokyoSkyra07_space-other_T1w_softseg.nii.gz} | 0 ...tseg.json => sub-tokyoSkyra07_space-other_T2star_softseg.json} | 0 ....nii.gz => sub-tokyoSkyra07_space-other_T2star_softseg.nii.gz} | 0 ...softseg.json => sub-tokyoSkyra07_space-other_T2w_softseg.json} | 0 ...seg.nii.gz => sub-tokyoSkyra07_space-other_T2w_softseg.nii.gz} | 0 ...g.json => sub-ubc01_flip-1_mt-on_space-other_MTS_softseg.json} | 0 ...i.gz => sub-ubc01_flip-1_mt-on_space-other_MTS_softseg.nii.gz} | 0 ...T2star_softseg.json => sub-ubc01_space-other_T1w_softseg.json} | 0 ...1w_softseg.nii.gz => sub-ubc01_space-other_T1w_softseg.nii.gz} | 0 ...T2w_softseg.json => sub-ubc01_space-other_T2star_softseg.json} | 0 ...softseg.nii.gz => sub-ubc01_space-other_T2star_softseg.nii.gz} | 0 ...on_MTS_softseg.json => sub-ubc01_space-other_T2w_softseg.json} | 0 ...2w_softseg.nii.gz => sub-ubc01_space-other_T2w_softseg.nii.gz} | 0 ...g.json => sub-ubc02_flip-1_mt-on_space-other_MTS_softseg.json} | 0 ...i.gz => sub-ubc02_flip-1_mt-on_space-other_MTS_softseg.nii.gz} | 0 ....json => sub-ubc02_flip-2_mt-off_space-other_MTS_softseg.json} | 0 ....gz => sub-ubc02_flip-2_mt-off_space-other_MTS_softseg.nii.gz} | 0 ...ff_MTS_softseg.json => sub-ubc02_space-other_T1w_softseg.json} | 0 ...1w_softseg.nii.gz => sub-ubc02_space-other_T1w_softseg.nii.gz} | 0 ...tar_softseg.json => sub-ubc02_space-other_T2star_softseg.json} | 0 ...softseg.nii.gz => sub-ubc02_space-other_T2star_softseg.nii.gz} | 0 ...02_T2w_softseg.json => sub-ubc02_space-other_T2w_softseg.json} | 0 ...2w_softseg.nii.gz => sub-ubc02_space-other_T2w_softseg.nii.gz} | 0 ...g.json => sub-ubc03_flip-1_mt-on_space-other_MTS_softseg.json} | 0 ...i.gz => sub-ubc03_flip-1_mt-on_space-other_MTS_softseg.nii.gz} | 0 ....json => sub-ubc03_flip-2_mt-off_space-other_MTS_softseg.json} | 0 ....gz => sub-ubc03_flip-2_mt-off_space-other_MTS_softseg.nii.gz} | 0 ...03_T2w_softseg.json => sub-ubc03_space-other_T1w_softseg.json} | 0 ...1w_softseg.nii.gz => sub-ubc03_space-other_T1w_softseg.nii.gz} | 0 ...MTS_softseg.json => sub-ubc03_space-other_T2star_softseg.json} | 0 ...softseg.nii.gz => sub-ubc03_space-other_T2star_softseg.nii.gz} | 0 ...ff_MTS_softseg.json => sub-ubc03_space-other_T2w_softseg.json} | 0 ...2w_softseg.nii.gz => sub-ubc03_space-other_T2w_softseg.nii.gz} | 0 ...g.json => sub-ubc04_flip-1_mt-on_space-other_MTS_softseg.json} | 0 ...i.gz => sub-ubc04_flip-1_mt-on_space-other_MTS_softseg.nii.gz} | 0 ....json => sub-ubc04_flip-2_mt-off_space-other_MTS_softseg.json} | 0 ....gz => sub-ubc04_flip-2_mt-off_space-other_MTS_softseg.nii.gz} | 0 ...04_T2w_softseg.json => sub-ubc04_space-other_T1w_softseg.json} | 0 ...1w_softseg.nii.gz => sub-ubc04_space-other_T1w_softseg.nii.gz} | 0 ...MTS_softseg.json => sub-ubc04_space-other_T2star_softseg.json} | 0 ...softseg.nii.gz => sub-ubc04_space-other_T2star_softseg.nii.gz} | 0 ...ff_MTS_softseg.json => sub-ubc04_space-other_T2w_softseg.json} | 0 ...2w_softseg.nii.gz => sub-ubc04_space-other_T2w_softseg.nii.gz} | 0 ...g.json => sub-ubc05_flip-1_mt-on_space-other_MTS_softseg.json} | 0 ...i.gz => sub-ubc05_flip-1_mt-on_space-other_MTS_softseg.nii.gz} | 0 ....json => sub-ubc05_flip-2_mt-off_space-other_MTS_softseg.json} | 0 ....gz => sub-ubc05_flip-2_mt-off_space-other_MTS_softseg.nii.gz} | 0 ...05_T2w_softseg.json => sub-ubc05_space-other_T1w_softseg.json} | 0 ...1w_softseg.nii.gz => sub-ubc05_space-other_T1w_softseg.nii.gz} | 0 ...MTS_softseg.json => sub-ubc05_space-other_T2star_softseg.json} | 0 ...softseg.nii.gz => sub-ubc05_space-other_T2star_softseg.nii.gz} | 0 ...ff_MTS_softseg.json => sub-ubc05_space-other_T2w_softseg.json} | 0 ...2w_softseg.nii.gz => sub-ubc05_space-other_T2w_softseg.nii.gz} | 0 ...g.json => sub-ubc06_flip-1_mt-on_space-other_MTS_softseg.json} | 0 ...i.gz => sub-ubc06_flip-1_mt-on_space-other_MTS_softseg.nii.gz} | 0 ....json => sub-ubc06_flip-2_mt-off_space-other_MTS_softseg.json} | 0 ....gz => sub-ubc06_flip-2_mt-off_space-other_MTS_softseg.nii.gz} | 0 ...06_T1w_softseg.json => sub-ubc06_space-other_T1w_softseg.json} | 0 ...1w_softseg.nii.gz => sub-ubc06_space-other_T1w_softseg.nii.gz} | 0 ...tar_softseg.json => sub-ubc06_space-other_T2star_softseg.json} | 0 ...softseg.nii.gz => sub-ubc06_space-other_T2star_softseg.nii.gz} | 0 ...06_T2w_softseg.json => sub-ubc06_space-other_T2w_softseg.json} | 0 ...2w_softseg.nii.gz => sub-ubc06_space-other_T2w_softseg.nii.gz} | 0 ...on => sub-ucdavis01_flip-1_mt-on_space-other_MTS_softseg.json} | 0 ... => sub-ucdavis01_flip-1_mt-on_space-other_MTS_softseg.nii.gz} | 0 ...n => sub-ucdavis01_flip-2_mt-off_space-other_MTS_softseg.json} | 0 ...=> sub-ucdavis01_flip-2_mt-off_space-other_MTS_softseg.nii.gz} | 0 ...2w_softseg.json => sub-ucdavis01_space-other_T1w_softseg.json} | 0 ...oftseg.nii.gz => sub-ucdavis01_space-other_T1w_softseg.nii.gz} | 0 ...softseg.json => sub-ucdavis01_space-other_T2star_softseg.json} | 0 ...seg.nii.gz => sub-ucdavis01_space-other_T2star_softseg.nii.gz} | 0 ...TS_softseg.json => sub-ucdavis01_space-other_T2w_softseg.json} | 0 ...oftseg.nii.gz => sub-ucdavis01_space-other_T2w_softseg.nii.gz} | 0 ...on => sub-ucdavis02_flip-1_mt-on_space-other_MTS_softseg.json} | 0 ... => sub-ucdavis02_flip-1_mt-on_space-other_MTS_softseg.nii.gz} | 0 ...n => sub-ucdavis02_flip-2_mt-off_space-other_MTS_softseg.json} | 0 ...=> sub-ucdavis02_flip-2_mt-off_space-other_MTS_softseg.nii.gz} | 0 ...2w_softseg.json => sub-ucdavis02_space-other_T1w_softseg.json} | 0 ...oftseg.nii.gz => sub-ucdavis02_space-other_T1w_softseg.nii.gz} | 0 ...softseg.json => sub-ucdavis02_space-other_T2star_softseg.json} | 0 ...seg.nii.gz => sub-ucdavis02_space-other_T2star_softseg.nii.gz} | 0 ...TS_softseg.json => sub-ucdavis02_space-other_T2w_softseg.json} | 0 ...oftseg.nii.gz => sub-ucdavis02_space-other_T2w_softseg.nii.gz} | 0 ...on => sub-ucdavis03_flip-1_mt-on_space-other_MTS_softseg.json} | 0 ... => sub-ucdavis03_flip-1_mt-on_space-other_MTS_softseg.nii.gz} | 0 ...ar_softseg.json => sub-ucdavis03_space-other_T1w_softseg.json} | 0 ...oftseg.nii.gz => sub-ucdavis03_space-other_T1w_softseg.nii.gz} | 0 ...softseg.json => sub-ucdavis03_space-other_T2star_softseg.json} | 0 ...seg.nii.gz => sub-ucdavis03_space-other_T2star_softseg.nii.gz} | 0 ...TS_softseg.json => sub-ucdavis03_space-other_T2w_softseg.json} | 0 ...oftseg.nii.gz => sub-ucdavis03_space-other_T2w_softseg.nii.gz} | 0 ...on => sub-ucdavis04_flip-1_mt-on_space-other_MTS_softseg.json} | 0 ... => sub-ucdavis04_flip-1_mt-on_space-other_MTS_softseg.nii.gz} | 0 ...n => sub-ucdavis04_flip-2_mt-off_space-other_MTS_softseg.json} | 0 ...=> sub-ucdavis04_flip-2_mt-off_space-other_MTS_softseg.nii.gz} | 0 ...2w_softseg.json => sub-ucdavis04_space-other_T1w_softseg.json} | 0 ...oftseg.nii.gz => sub-ucdavis04_space-other_T1w_softseg.nii.gz} | 0 ...softseg.json => sub-ucdavis04_space-other_T2star_softseg.json} | 0 ...seg.nii.gz => sub-ucdavis04_space-other_T2star_softseg.nii.gz} | 0 ...TS_softseg.json => sub-ucdavis04_space-other_T2w_softseg.json} | 0 ...oftseg.nii.gz => sub-ucdavis04_space-other_T2w_softseg.nii.gz} | 0 ...on => sub-ucdavis05_flip-1_mt-on_space-other_MTS_softseg.json} | 0 ... => sub-ucdavis05_flip-1_mt-on_space-other_MTS_softseg.nii.gz} | 0 ...ar_softseg.json => sub-ucdavis05_space-other_T1w_softseg.json} | 0 ...oftseg.nii.gz => sub-ucdavis05_space-other_T1w_softseg.nii.gz} | 0 ...softseg.json => sub-ucdavis05_space-other_T2star_softseg.json} | 0 ...seg.nii.gz => sub-ucdavis05_space-other_T2star_softseg.nii.gz} | 0 ...TS_softseg.json => sub-ucdavis05_space-other_T2w_softseg.json} | 0 ...oftseg.nii.gz => sub-ucdavis05_space-other_T2w_softseg.nii.gz} | 0 ...on => sub-ucdavis06_flip-1_mt-on_space-other_MTS_softseg.json} | 0 ... => sub-ucdavis06_flip-1_mt-on_space-other_MTS_softseg.nii.gz} | 0 ...ar_softseg.json => sub-ucdavis06_space-other_T1w_softseg.json} | 0 ...oftseg.nii.gz => sub-ucdavis06_space-other_T1w_softseg.nii.gz} | 0 ...softseg.json => sub-ucdavis06_space-other_T2star_softseg.json} | 0 ...seg.nii.gz => sub-ucdavis06_space-other_T2star_softseg.nii.gz} | 0 ...TS_softseg.json => sub-ucdavis06_space-other_T2w_softseg.json} | 0 ...oftseg.nii.gz => sub-ucdavis06_space-other_T2w_softseg.nii.gz} | 0 ...g.json => sub-ucl01_flip-1_mt-on_space-other_MTS_softseg.json} | 0 ...i.gz => sub-ucl01_flip-1_mt-on_space-other_MTS_softseg.nii.gz} | 0 ....json => sub-ucl01_flip-2_mt-off_space-other_MTS_softseg.json} | 0 ....gz => sub-ucl01_flip-2_mt-off_space-other_MTS_softseg.nii.gz} | 0 ...01_T2w_softseg.json => sub-ucl01_space-other_T1w_softseg.json} | 0 ...1w_softseg.nii.gz => sub-ucl01_space-other_T1w_softseg.nii.gz} | 0 ...MTS_softseg.json => sub-ucl01_space-other_T2star_softseg.json} | 0 ...softseg.nii.gz => sub-ucl01_space-other_T2star_softseg.nii.gz} | 0 ...ff_MTS_softseg.json => sub-ucl01_space-other_T2w_softseg.json} | 0 ...2w_softseg.nii.gz => sub-ucl01_space-other_T2w_softseg.nii.gz} | 0 ...g.json => sub-ucl02_flip-1_mt-on_space-other_MTS_softseg.json} | 0 ...i.gz => sub-ucl02_flip-1_mt-on_space-other_MTS_softseg.nii.gz} | 0 ....json => sub-ucl02_flip-2_mt-off_space-other_MTS_softseg.json} | 0 ....gz => sub-ucl02_flip-2_mt-off_space-other_MTS_softseg.nii.gz} | 0 ...02_T2w_softseg.json => sub-ucl02_space-other_T1w_softseg.json} | 0 ...1w_softseg.nii.gz => sub-ucl02_space-other_T1w_softseg.nii.gz} | 0 ...MTS_softseg.json => sub-ucl02_space-other_T2star_softseg.json} | 0 ...softseg.nii.gz => sub-ucl02_space-other_T2star_softseg.nii.gz} | 0 ...ff_MTS_softseg.json => sub-ucl02_space-other_T2w_softseg.json} | 0 ...2w_softseg.nii.gz => sub-ucl02_space-other_T2w_softseg.nii.gz} | 0 ...g.json => sub-ucl03_flip-1_mt-on_space-other_MTS_softseg.json} | 0 ...i.gz => sub-ucl03_flip-1_mt-on_space-other_MTS_softseg.nii.gz} | 0 ....json => sub-ucl03_flip-2_mt-off_space-other_MTS_softseg.json} | 0 ....gz => sub-ucl03_flip-2_mt-off_space-other_MTS_softseg.nii.gz} | 0 ...03_T2w_softseg.json => sub-ucl03_space-other_T1w_softseg.json} | 0 ...1w_softseg.nii.gz => sub-ucl03_space-other_T1w_softseg.nii.gz} | 0 ...MTS_softseg.json => sub-ucl03_space-other_T2star_softseg.json} | 0 ...softseg.nii.gz => sub-ucl03_space-other_T2star_softseg.nii.gz} | 0 ...ff_MTS_softseg.json => sub-ucl03_space-other_T2w_softseg.json} | 0 ...2w_softseg.nii.gz => 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sub-unf07_space-other_T2star_softseg.nii.gz} | 0 ...ff_MTS_softseg.json => sub-unf07_space-other_T2w_softseg.json} | 0 ...2w_softseg.nii.gz => sub-unf07_space-other_T2w_softseg.nii.gz} | 0 ...=> sub-vallHebron01_flip-1_mt-on_space-other_MTS_softseg.json} | 0 ... sub-vallHebron01_flip-1_mt-on_space-other_MTS_softseg.nii.gz} | 0 ...> sub-vallHebron01_flip-2_mt-off_space-other_MTS_softseg.json} | 0 ...sub-vallHebron01_flip-2_mt-off_space-other_MTS_softseg.nii.gz} | 0 ...softseg.json => sub-vallHebron01_space-other_T1w_softseg.json} | 0 ...seg.nii.gz => sub-vallHebron01_space-other_T1w_softseg.nii.gz} | 0 ...tseg.json => sub-vallHebron01_space-other_T2star_softseg.json} | 0 ....nii.gz => sub-vallHebron01_space-other_T2star_softseg.nii.gz} | 0 ...softseg.json => sub-vallHebron01_space-other_T2w_softseg.json} | 0 ...seg.nii.gz => sub-vallHebron01_space-other_T2w_softseg.nii.gz} | 0 ...=> sub-vallHebron02_flip-1_mt-on_space-other_MTS_softseg.json} | 0 ... sub-vallHebron02_flip-1_mt-on_space-other_MTS_softseg.nii.gz} | 0 ...> sub-vallHebron02_flip-2_mt-off_space-other_MTS_softseg.json} | 0 ...sub-vallHebron02_flip-2_mt-off_space-other_MTS_softseg.nii.gz} | 0 ...softseg.json => sub-vallHebron02_space-other_T1w_softseg.json} | 0 ...seg.nii.gz => sub-vallHebron02_space-other_T1w_softseg.nii.gz} | 0 ...tseg.json => sub-vallHebron02_space-other_T2star_softseg.json} | 0 ....nii.gz => sub-vallHebron02_space-other_T2star_softseg.nii.gz} | 0 ...softseg.json => sub-vallHebron02_space-other_T2w_softseg.json} | 0 ...seg.nii.gz => sub-vallHebron02_space-other_T2w_softseg.nii.gz} | 0 ...=> sub-vallHebron03_flip-1_mt-on_space-other_MTS_softseg.json} | 0 ... sub-vallHebron03_flip-1_mt-on_space-other_MTS_softseg.nii.gz} | 0 ...> sub-vallHebron03_flip-2_mt-off_space-other_MTS_softseg.json} | 0 ...sub-vallHebron03_flip-2_mt-off_space-other_MTS_softseg.nii.gz} | 0 ...softseg.json => sub-vallHebron03_space-other_T1w_softseg.json} | 0 ...seg.nii.gz => 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sub-vallHebron04_space-other_T2w_softseg.nii.gz} | 0 ...=> sub-vallHebron05_flip-1_mt-on_space-other_MTS_softseg.json} | 0 ... sub-vallHebron05_flip-1_mt-on_space-other_MTS_softseg.nii.gz} | 0 ...> sub-vallHebron05_flip-2_mt-off_space-other_MTS_softseg.json} | 0 ...sub-vallHebron05_flip-2_mt-off_space-other_MTS_softseg.nii.gz} | 0 ...softseg.json => sub-vallHebron05_space-other_T1w_softseg.json} | 0 ...seg.nii.gz => sub-vallHebron05_space-other_T1w_softseg.nii.gz} | 0 ...tseg.json => sub-vallHebron05_space-other_T2star_softseg.json} | 0 ....nii.gz => sub-vallHebron05_space-other_T2star_softseg.nii.gz} | 0 ...softseg.json => sub-vallHebron05_space-other_T2w_softseg.json} | 0 ...seg.nii.gz => sub-vallHebron05_space-other_T2w_softseg.nii.gz} | 0 ...=> sub-vallHebron06_flip-1_mt-on_space-other_MTS_softseg.json} | 0 ... sub-vallHebron06_flip-1_mt-on_space-other_MTS_softseg.nii.gz} | 0 ...> sub-vallHebron06_flip-2_mt-off_space-other_MTS_softseg.json} | 0 ...sub-vallHebron06_flip-2_mt-off_space-other_MTS_softseg.nii.gz} | 0 ...softseg.json => sub-vallHebron06_space-other_T1w_softseg.json} | 0 ...seg.nii.gz => sub-vallHebron06_space-other_T1w_softseg.nii.gz} | 0 ...tseg.json => sub-vallHebron06_space-other_T2star_softseg.json} | 0 ....nii.gz => sub-vallHebron06_space-other_T2star_softseg.nii.gz} | 0 ...softseg.json => sub-vallHebron06_space-other_T2w_softseg.json} | 0 ...seg.nii.gz => sub-vallHebron06_space-other_T2w_softseg.nii.gz} | 0 ...=> sub-vallHebron07_flip-1_mt-on_space-other_MTS_softseg.json} | 0 ... sub-vallHebron07_flip-1_mt-on_space-other_MTS_softseg.nii.gz} | 0 ...> sub-vallHebron07_flip-2_mt-off_space-other_MTS_softseg.json} | 0 ...sub-vallHebron07_flip-2_mt-off_space-other_MTS_softseg.nii.gz} | 0 ...softseg.json => sub-vallHebron07_space-other_T1w_softseg.json} | 0 ...seg.nii.gz => sub-vallHebron07_space-other_T1w_softseg.nii.gz} | 0 ...tseg.json => sub-vallHebron07_space-other_T2star_softseg.json} | 0 ....nii.gz => 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sub-vuiisIngenia04_space-other_T1w_softseg.nii.gz} | 0 ...eg.json => sub-vuiisIngenia04_space-other_T2star_softseg.json} | 0 ...ii.gz => sub-vuiisIngenia04_space-other_T2star_softseg.nii.gz} | 0 ...ftseg.json => sub-vuiisIngenia04_space-other_T2w_softseg.json} | 0 ...g.nii.gz => sub-vuiisIngenia04_space-other_T2w_softseg.nii.gz} | 0 ... sub-vuiisIngenia05_flip-1_mt-on_space-other_MTS_softseg.json} | 0 ...ub-vuiisIngenia05_flip-1_mt-on_space-other_MTS_softseg.nii.gz} | 0 ...sub-vuiisIngenia05_flip-2_mt-off_space-other_MTS_softseg.json} | 0 ...b-vuiisIngenia05_flip-2_mt-off_space-other_MTS_softseg.nii.gz} | 0 ...ftseg.json => sub-vuiisIngenia05_space-other_T1w_softseg.json} | 0 ...g.nii.gz => sub-vuiisIngenia05_space-other_T1w_softseg.nii.gz} | 0 ...eg.json => sub-vuiisIngenia05_space-other_T2star_softseg.json} | 0 ...ii.gz => sub-vuiisIngenia05_space-other_T2star_softseg.nii.gz} | 0 ...ftseg.json => sub-vuiisIngenia05_space-other_T2w_softseg.json} | 0 ...g.nii.gz => sub-vuiisIngenia05_space-other_T2w_softseg.nii.gz} | 0 ... sub-vuiisIngenia06_flip-1_mt-on_space-other_MTS_softseg.json} | 0 ...ub-vuiisIngenia06_flip-1_mt-on_space-other_MTS_softseg.nii.gz} | 0 ...sub-vuiisIngenia06_flip-2_mt-off_space-other_MTS_softseg.json} | 0 ...b-vuiisIngenia06_flip-2_mt-off_space-other_MTS_softseg.nii.gz} | 0 ...ftseg.json => sub-vuiisIngenia06_space-other_T1w_softseg.json} | 0 ...g.nii.gz => sub-vuiisIngenia06_space-other_T1w_softseg.nii.gz} | 0 ...eg.json => sub-vuiisIngenia06_space-other_T2star_softseg.json} | 0 ...ii.gz => sub-vuiisIngenia06_space-other_T2star_softseg.nii.gz} | 0 ...ftseg.json => sub-vuiisIngenia06_space-other_T2w_softseg.json} | 0 ...g.nii.gz => sub-vuiisIngenia06_space-other_T2w_softseg.nii.gz} | 0 6351 files changed, 0 insertions(+), 0 deletions(-) rename derivatives/labels/sub-amu01/anat/{sub-amu01_flip-1_mt-on_MTS_seg-manual.json => sub-amu01_flip-1_mt-on_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-amu01/anat/{sub-amu01_flip-1_mt-on_MTS_seg-manual.nii.gz => sub-amu01_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-amu01/anat/{sub-amu01_T2star_seg-manual.json => sub-amu01_flip-2_mt-off_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-amu01/anat/{sub-amu01_flip-2_mt-off_MTS_seg-manual.nii.gz => sub-amu01_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-amu01/anat/{sub-amu01_T1w_labels-disc-manual.json => sub-amu01_space-other_T1w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-amu01/anat/{sub-amu01_T1w_labels-disc-manual.nii.gz => sub-amu01_space-other_T1w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-amu01/anat/{sub-amu01_T1w_seg-manual.json => sub-amu01_space-other_T1w_seg-manual.json} (100%) rename derivatives/labels/sub-amu01/anat/{sub-amu01_T1w_seg-manual.nii.gz => sub-amu01_space-other_T1w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-amu01/anat/{sub-amu01_T2w_seg-manual.json => sub-amu01_space-other_T2star_seg-manual.json} (100%) rename derivatives/labels/sub-amu01/anat/{sub-amu01_T2star_seg-manual.nii.gz => sub-amu01_space-other_T2star_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-amu01/anat/{sub-amu01_T2w_labels-disc-manual.json => sub-amu01_space-other_T2w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-amu01/anat/{sub-amu01_T2w_labels-disc-manual.nii.gz => sub-amu01_space-other_T2w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-amu01/anat/{sub-amu01_flip-2_mt-off_MTS_seg-manual.json => sub-amu01_space-other_T2w_seg-manual.json} (100%) rename derivatives/labels/sub-amu01/anat/{sub-amu01_T2w_seg-manual.nii.gz => sub-amu01_space-other_T2w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-amu02/anat/{sub-amu02_T2star_seg-manual.json => sub-amu02_flip-1_mt-on_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-amu02/anat/{sub-amu02_flip-1_mt-on_MTS_seg-manual.nii.gz => sub-amu02_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-amu02/anat/{sub-amu02_flip-2_mt-off_MTS_seg-manual.json => sub-amu02_flip-2_mt-off_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-amu02/anat/{sub-amu02_flip-2_mt-off_MTS_seg-manual.nii.gz => sub-amu02_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-amu02/anat/{sub-amu02_T1w_RPI_r_labels-manual.nii.gz => sub-amu02_space-other_T1w_RPI_r_labels-manual.nii.gz} (100%) rename derivatives/labels/sub-amu02/anat/{sub-amu02_T1w_labels-disc-manual.json => sub-amu02_space-other_T1w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-amu02/anat/{sub-amu02_T1w_labels-disc-manual.nii.gz => sub-amu02_space-other_T1w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-amu02/anat/{sub-amu02_T1w_seg-manual.json => sub-amu02_space-other_T1w_seg-manual.json} (100%) rename derivatives/labels/sub-amu02/anat/{sub-amu02_T1w_seg-manual.nii.gz => sub-amu02_space-other_T1w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-amu02/anat/{sub-amu02_flip-1_mt-on_MTS_seg-manual.json => sub-amu02_space-other_T2star_seg-manual.json} (100%) rename derivatives/labels/sub-amu02/anat/{sub-amu02_T2star_seg-manual.nii.gz => sub-amu02_space-other_T2star_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-amu02/anat/{sub-amu02_T2w_labels-disc-manual.json => sub-amu02_space-other_T2w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-amu02/anat/{sub-amu02_T2w_labels-disc-manual.nii.gz => sub-amu02_space-other_T2w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-amu02/anat/{sub-amu02_T2w_seg-manual.json => sub-amu02_space-other_T2w_seg-manual.json} (100%) rename derivatives/labels/sub-amu02/anat/{sub-amu02_T2w_seg-manual.nii.gz => sub-amu02_space-other_T2w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-amu03/anat/{sub-amu03_flip-1_mt-on_MTS_seg-manual.json => sub-amu03_flip-1_mt-on_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-amu03/anat/{sub-amu03_flip-1_mt-on_MTS_seg-manual.nii.gz => sub-amu03_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-amu03/anat/{sub-amu03_flip-2_mt-off_MTS_seg-manual.json => sub-amu03_flip-2_mt-off_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-amu03/anat/{sub-amu03_flip-2_mt-off_MTS_seg-manual.nii.gz => sub-amu03_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-amu03/anat/{sub-amu03_T1w_labels-disc-manual.json => sub-amu03_space-other_T1w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-amu03/anat/{sub-amu03_T1w_labels-disc-manual.nii.gz => sub-amu03_space-other_T1w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-amu03/anat/{sub-amu03_T1w_seg-manual.json => sub-amu03_space-other_T1w_seg-manual.json} (100%) rename derivatives/labels/sub-amu03/anat/{sub-amu03_T1w_seg-manual.nii.gz => sub-amu03_space-other_T1w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-amu03/anat/{sub-amu03_T2star_seg-manual.json => sub-amu03_space-other_T2star_seg-manual.json} (100%) rename derivatives/labels/sub-amu03/anat/{sub-amu03_T2star_seg-manual.nii.gz => sub-amu03_space-other_T2star_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-amu03/anat/{sub-amu03_T2w_labels-disc-manual.json => sub-amu03_space-other_T2w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-amu03/anat/{sub-amu03_T2w_labels-disc-manual.nii.gz => sub-amu03_space-other_T2w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-amu03/anat/{sub-amu03_T2w_seg-manual.json => sub-amu03_space-other_T2w_seg-manual.json} (100%) rename derivatives/labels/sub-amu03/anat/{sub-amu03_T2w_seg-manual.nii.gz => sub-amu03_space-other_T2w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-amu04/anat/{sub-amu04_T2star_seg-manual.json => sub-amu04_flip-1_mt-on_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-amu04/anat/{sub-amu04_flip-1_mt-on_MTS_seg-manual.nii.gz => sub-amu04_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-amu04/anat/{sub-amu04_flip-2_mt-off_MTS_seg-manual.json => sub-amu04_flip-2_mt-off_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-amu04/anat/{sub-amu04_flip-2_mt-off_MTS_seg-manual.nii.gz => sub-amu04_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-amu04/anat/{sub-amu04_T1w_RPI_r_labels-manual.nii.gz => sub-amu04_space-other_T1w_RPI_r_labels-manual.nii.gz} (100%) rename derivatives/labels/sub-amu04/anat/{sub-amu04_T1w_labels-disc-manual.json => sub-amu04_space-other_T1w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-amu04/anat/{sub-amu04_T1w_labels-disc-manual.nii.gz => sub-amu04_space-other_T1w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-amu04/anat/{sub-amu04_T1w_seg-manual.json => sub-amu04_space-other_T1w_seg-manual.json} (100%) rename derivatives/labels/sub-amu04/anat/{sub-amu04_T1w_seg-manual.nii.gz => sub-amu04_space-other_T1w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-amu04/anat/{sub-amu04_flip-1_mt-on_MTS_seg-manual.json => sub-amu04_space-other_T2star_seg-manual.json} (100%) rename derivatives/labels/sub-amu04/anat/{sub-amu04_T2star_seg-manual.nii.gz => sub-amu04_space-other_T2star_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-amu04/anat/{sub-amu04_T2w_labels-disc-manual.json => sub-amu04_space-other_T2w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-amu04/anat/{sub-amu04_T2w_labels-disc-manual.nii.gz => sub-amu04_space-other_T2w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-amu04/anat/{sub-amu04_T2w_seg-manual.json => sub-amu04_space-other_T2w_seg-manual.json} (100%) rename derivatives/labels/sub-amu04/anat/{sub-amu04_T2w_seg-manual.nii.gz => sub-amu04_space-other_T2w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-amu05/anat/{sub-amu05_T2star_seg-manual.json => sub-amu05_flip-1_mt-on_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-amu05/anat/{sub-amu05_flip-1_mt-on_MTS_seg-manual.nii.gz => sub-amu05_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-amu05/anat/{sub-amu05_T2w_seg-manual.json => sub-amu05_flip-2_mt-off_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-amu05/anat/{sub-amu05_flip-2_mt-off_MTS_seg-manual.nii.gz => sub-amu05_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-amu05/anat/{sub-amu05_T1w_RPI_r_labels-manual.nii.gz => sub-amu05_space-other_T1w_RPI_r_labels-manual.nii.gz} (100%) rename derivatives/labels/sub-amu05/anat/{sub-amu05_T1w_labels-disc-manual.json => sub-amu05_space-other_T1w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-amu05/anat/{sub-amu05_T1w_labels-disc-manual.nii.gz => sub-amu05_space-other_T1w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-amu05/anat/{sub-amu05_T1w_seg-manual.json => sub-amu05_space-other_T1w_seg-manual.json} (100%) rename derivatives/labels/sub-amu05/anat/{sub-amu05_T1w_seg-manual.nii.gz => sub-amu05_space-other_T1w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-amu05/anat/{sub-amu05_flip-1_mt-on_MTS_seg-manual.json => sub-amu05_space-other_T2star_seg-manual.json} (100%) rename derivatives/labels/sub-amu05/anat/{sub-amu05_T2star_seg-manual.nii.gz => sub-amu05_space-other_T2star_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-amu05/anat/{sub-amu05_T2w_labels-disc-manual.json => sub-amu05_space-other_T2w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-amu05/anat/{sub-amu05_T2w_labels-disc-manual.nii.gz => sub-amu05_space-other_T2w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-amu05/anat/{sub-amu05_flip-2_mt-off_MTS_seg-manual.json => sub-amu05_space-other_T2w_seg-manual.json} (100%) rename derivatives/labels/sub-amu05/anat/{sub-amu05_T2w_seg-manual.nii.gz => sub-amu05_space-other_T2w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-balgrist01/anat/{sub-balgrist01_T2star_seg-manual.json => sub-balgrist01_flip-1_mt-on_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-balgrist01/anat/{sub-balgrist01_flip-1_mt-on_MTS_seg-manual.nii.gz => sub-balgrist01_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-balgrist01/anat/{sub-balgrist01_flip-2_mt-off_MTS_seg-manual.json => sub-balgrist01_flip-2_mt-off_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-balgrist01/anat/{sub-balgrist01_flip-2_mt-off_MTS_seg-manual.nii.gz => sub-balgrist01_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-balgrist01/anat/{sub-balgrist01_T1w_labels-disc-manual.json => sub-balgrist01_space-other_T1w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-balgrist01/anat/{sub-balgrist01_T1w_labels-disc-manual.nii.gz => sub-balgrist01_space-other_T1w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-balgrist01/anat/{sub-balgrist01_T1w_seg-manual.json => sub-balgrist01_space-other_T1w_seg-manual.json} (100%) rename derivatives/labels/sub-balgrist01/anat/{sub-balgrist01_T1w_seg-manual.nii.gz => sub-balgrist01_space-other_T1w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-balgrist01/anat/{sub-balgrist01_T2w_seg-manual.json => sub-balgrist01_space-other_T2star_seg-manual.json} (100%) rename derivatives/labels/sub-balgrist01/anat/{sub-balgrist01_T2star_seg-manual.nii.gz => sub-balgrist01_space-other_T2star_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-balgrist01/anat/{sub-balgrist01_T2w_labels-disc-manual.json => sub-balgrist01_space-other_T2w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-balgrist01/anat/{sub-balgrist01_T2w_labels-disc-manual.nii.gz => sub-balgrist01_space-other_T2w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-balgrist01/anat/{sub-balgrist01_flip-1_mt-on_MTS_seg-manual.json => sub-balgrist01_space-other_T2w_seg-manual.json} (100%) rename derivatives/labels/sub-balgrist01/anat/{sub-balgrist01_T2w_seg-manual.nii.gz => sub-balgrist01_space-other_T2w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-balgrist02/anat/{sub-balgrist02_flip-1_mt-on_MTS_seg-manual.json => sub-balgrist02_flip-1_mt-on_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-balgrist02/anat/{sub-balgrist02_flip-1_mt-on_MTS_seg-manual.nii.gz => sub-balgrist02_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-balgrist02/anat/{sub-balgrist02_flip-2_mt-off_MTS_seg-manual.json => sub-balgrist02_flip-2_mt-off_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-balgrist02/anat/{sub-balgrist02_flip-2_mt-off_MTS_seg-manual.nii.gz => sub-balgrist02_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-balgrist02/anat/{sub-balgrist02_T1w_labels-disc-manual.json => sub-balgrist02_space-other_T1w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-balgrist02/anat/{sub-balgrist02_T1w_labels-disc-manual.nii.gz => sub-balgrist02_space-other_T1w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-balgrist02/anat/{sub-balgrist02_T1w_seg-manual.json => sub-balgrist02_space-other_T1w_seg-manual.json} (100%) rename derivatives/labels/sub-balgrist02/anat/{sub-balgrist02_T1w_seg-manual.nii.gz => sub-balgrist02_space-other_T1w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-balgrist02/anat/{sub-balgrist02_T2star_seg-manual.json => sub-balgrist02_space-other_T2star_seg-manual.json} (100%) rename derivatives/labels/sub-balgrist02/anat/{sub-balgrist02_T2star_seg-manual.nii.gz => sub-balgrist02_space-other_T2star_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-balgrist02/anat/{sub-balgrist02_T2w_labels-disc-manual.json => sub-balgrist02_space-other_T2w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-balgrist02/anat/{sub-balgrist02_T2w_labels-disc-manual.nii.gz => sub-balgrist02_space-other_T2w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-balgrist02/anat/{sub-balgrist02_T2w_seg-manual.json => sub-balgrist02_space-other_T2w_seg-manual.json} (100%) rename derivatives/labels/sub-balgrist02/anat/{sub-balgrist02_T2w_seg-manual.nii.gz => sub-balgrist02_space-other_T2w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-balgrist03/anat/{sub-balgrist03_flip-1_mt-on_MTS_seg-manual.json => sub-balgrist03_flip-1_mt-on_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-balgrist03/anat/{sub-balgrist03_flip-1_mt-on_MTS_seg-manual.nii.gz => sub-balgrist03_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-balgrist03/anat/{sub-balgrist03_flip-2_mt-off_MTS_seg-manual.json => sub-balgrist03_flip-2_mt-off_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-balgrist03/anat/{sub-balgrist03_flip-2_mt-off_MTS_seg-manual.nii.gz => sub-balgrist03_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-balgrist03/anat/{sub-balgrist03_T1w_labels-disc-manual.json => sub-balgrist03_space-other_T1w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-balgrist03/anat/{sub-balgrist03_T1w_labels-disc-manual.nii.gz => sub-balgrist03_space-other_T1w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-balgrist03/anat/{sub-balgrist03_T1w_seg-manual.json => sub-balgrist03_space-other_T1w_seg-manual.json} (100%) rename derivatives/labels/sub-balgrist03/anat/{sub-balgrist03_T1w_seg-manual.nii.gz => sub-balgrist03_space-other_T1w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-balgrist03/anat/{sub-balgrist03_T2star_seg-manual.json => sub-balgrist03_space-other_T2star_seg-manual.json} (100%) rename derivatives/labels/sub-balgrist03/anat/{sub-balgrist03_T2star_seg-manual.nii.gz => sub-balgrist03_space-other_T2star_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-balgrist03/anat/{sub-balgrist03_T2w_labels-disc-manual.json => sub-balgrist03_space-other_T2w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-balgrist03/anat/{sub-balgrist03_T2w_labels-disc-manual.nii.gz => sub-balgrist03_space-other_T2w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-balgrist03/anat/{sub-balgrist03_T2w_seg-manual.json => sub-balgrist03_space-other_T2w_seg-manual.json} (100%) rename derivatives/labels/sub-balgrist03/anat/{sub-balgrist03_T2w_seg-manual.nii.gz => sub-balgrist03_space-other_T2w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-balgrist04/anat/{sub-balgrist04_flip-1_mt-on_MTS_seg-manual.json => sub-balgrist04_flip-1_mt-on_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-balgrist04/anat/{sub-balgrist04_flip-1_mt-on_MTS_seg-manual.nii.gz => sub-balgrist04_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-balgrist04/anat/{sub-balgrist04_flip-2_mt-off_MTS_seg-manual.json => sub-balgrist04_flip-2_mt-off_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-balgrist04/anat/{sub-balgrist04_flip-2_mt-off_MTS_seg-manual.nii.gz => sub-balgrist04_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-balgrist04/anat/{sub-balgrist04_T1w_labels-disc-manual.json => sub-balgrist04_space-other_T1w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-balgrist04/anat/{sub-balgrist04_T1w_labels-disc-manual.nii.gz => sub-balgrist04_space-other_T1w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-balgrist04/anat/{sub-balgrist04_T1w_seg-manual.json => sub-balgrist04_space-other_T1w_seg-manual.json} (100%) rename derivatives/labels/sub-balgrist04/anat/{sub-balgrist04_T1w_seg-manual.nii.gz => sub-balgrist04_space-other_T1w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-balgrist04/anat/{sub-balgrist04_T2star_seg-manual.json => sub-balgrist04_space-other_T2star_seg-manual.json} (100%) rename derivatives/labels/sub-balgrist04/anat/{sub-balgrist04_T2star_seg-manual.nii.gz => sub-balgrist04_space-other_T2star_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-balgrist04/anat/{sub-balgrist04_T2w_labels-disc-manual.json => sub-balgrist04_space-other_T2w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-balgrist04/anat/{sub-balgrist04_T2w_labels-disc-manual.nii.gz => sub-balgrist04_space-other_T2w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-balgrist04/anat/{sub-balgrist04_T2w_seg-manual.json => sub-balgrist04_space-other_T2w_seg-manual.json} (100%) rename derivatives/labels/sub-balgrist04/anat/{sub-balgrist04_T2w_seg-manual.nii.gz => sub-balgrist04_space-other_T2w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-balgrist05/anat/{sub-balgrist05_flip-1_mt-on_MTS_seg-manual.json => sub-balgrist05_flip-1_mt-on_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-balgrist05/anat/{sub-balgrist05_flip-1_mt-on_MTS_seg-manual.nii.gz => sub-balgrist05_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-balgrist05/anat/{sub-balgrist05_T2star_seg-manual.json => sub-balgrist05_flip-2_mt-off_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-balgrist05/anat/{sub-balgrist05_flip-2_mt-off_MTS_seg-manual.nii.gz => sub-balgrist05_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-balgrist05/anat/{sub-balgrist05_T1w_labels-disc-manual.json => sub-balgrist05_space-other_T1w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-balgrist05/anat/{sub-balgrist05_T1w_labels-disc-manual.nii.gz => sub-balgrist05_space-other_T1w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-balgrist05/anat/{sub-balgrist05_T1w_seg-manual.json => sub-balgrist05_space-other_T1w_seg-manual.json} (100%) rename derivatives/labels/sub-balgrist05/anat/{sub-balgrist05_T1w_seg-manual.nii.gz => sub-balgrist05_space-other_T1w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-balgrist05/anat/{sub-balgrist05_flip-2_mt-off_MTS_seg-manual.json => sub-balgrist05_space-other_T2star_seg-manual.json} (100%) rename derivatives/labels/sub-balgrist05/anat/{sub-balgrist05_T2star_seg-manual.nii.gz => sub-balgrist05_space-other_T2star_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-balgrist05/anat/{sub-balgrist05_T2w_labels-disc-manual.json => sub-balgrist05_space-other_T2w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-balgrist05/anat/{sub-balgrist05_T2w_labels-disc-manual.nii.gz => sub-balgrist05_space-other_T2w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-balgrist05/anat/{sub-balgrist05_T2w_seg-manual.json => sub-balgrist05_space-other_T2w_seg-manual.json} (100%) rename derivatives/labels/sub-balgrist05/anat/{sub-balgrist05_T2w_seg-manual.nii.gz => sub-balgrist05_space-other_T2w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-balgrist06/anat/{sub-balgrist06_T2star_seg-manual.json => sub-balgrist06_flip-1_mt-on_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-balgrist06/anat/{sub-balgrist06_flip-1_mt-on_MTS_seg-manual.nii.gz => sub-balgrist06_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-balgrist06/anat/{sub-balgrist06_T2w_seg-manual.json => sub-balgrist06_flip-2_mt-off_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-balgrist06/anat/{sub-balgrist06_flip-2_mt-off_MTS_seg-manual.nii.gz => sub-balgrist06_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-balgrist06/anat/{sub-balgrist06_T1w_labels-disc-manual.json => sub-balgrist06_space-other_T1w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-balgrist06/anat/{sub-balgrist06_T1w_labels-disc-manual.nii.gz => sub-balgrist06_space-other_T1w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-balgrist06/anat/{sub-balgrist06_T1w_seg-manual.json => sub-balgrist06_space-other_T1w_seg-manual.json} (100%) rename derivatives/labels/sub-balgrist06/anat/{sub-balgrist06_T1w_seg-manual.nii.gz => sub-balgrist06_space-other_T1w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-balgrist06/anat/{sub-balgrist06_flip-1_mt-on_MTS_seg-manual.json => sub-balgrist06_space-other_T2star_seg-manual.json} (100%) rename derivatives/labels/sub-balgrist06/anat/{sub-balgrist06_T2star_seg-manual.nii.gz => sub-balgrist06_space-other_T2star_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-balgrist06/anat/{sub-balgrist06_T2w_labels-disc-manual.json => sub-balgrist06_space-other_T2w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-balgrist06/anat/{sub-balgrist06_T2w_labels-disc-manual.nii.gz => sub-balgrist06_space-other_T2w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-balgrist06/anat/{sub-balgrist06_flip-2_mt-off_MTS_seg-manual.json => sub-balgrist06_space-other_T2w_seg-manual.json} (100%) rename derivatives/labels/sub-balgrist06/anat/{sub-balgrist06_T2w_seg-manual.nii.gz => sub-balgrist06_space-other_T2w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-barcelona01/anat/{sub-barcelona01_flip-1_mt-on_MTS_seg-manual.json => sub-barcelona01_flip-1_mt-on_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-barcelona01/anat/{sub-barcelona01_flip-1_mt-on_MTS_seg-manual.nii.gz => sub-barcelona01_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-barcelona01/anat/{sub-barcelona01_T2w_seg-manual.json => sub-barcelona01_flip-2_mt-off_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-barcelona01/anat/{sub-barcelona01_flip-2_mt-off_MTS_seg-manual.nii.gz => sub-barcelona01_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-barcelona01/anat/{sub-barcelona01_T1w_labels-disc-manual.json => sub-barcelona01_space-other_T1w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-barcelona01/anat/{sub-barcelona01_T1w_labels-disc-manual.nii.gz => sub-barcelona01_space-other_T1w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-barcelona01/anat/{sub-barcelona01_T1w_seg-manual.json => sub-barcelona01_space-other_T1w_seg-manual.json} (100%) rename derivatives/labels/sub-barcelona01/anat/{sub-barcelona01_T1w_seg-manual.nii.gz => sub-barcelona01_space-other_T1w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-barcelona01/anat/{sub-barcelona01_T2star_seg-manual.json => sub-barcelona01_space-other_T2star_seg-manual.json} (100%) rename derivatives/labels/sub-barcelona01/anat/{sub-barcelona01_T2star_seg-manual.nii.gz => sub-barcelona01_space-other_T2star_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-barcelona01/anat/{sub-barcelona01_T2w_labels-disc-manual.json => sub-barcelona01_space-other_T2w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-barcelona01/anat/{sub-barcelona01_T2w_labels-disc-manual.nii.gz => sub-barcelona01_space-other_T2w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-barcelona01/anat/{sub-barcelona01_flip-2_mt-off_MTS_seg-manual.json => sub-barcelona01_space-other_T2w_seg-manual.json} (100%) rename derivatives/labels/sub-barcelona01/anat/{sub-barcelona01_T2w_seg-manual.nii.gz => sub-barcelona01_space-other_T2w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-barcelona02/anat/{sub-barcelona02_T2w_seg-manual.json => sub-barcelona02_flip-1_mt-on_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-barcelona02/anat/{sub-barcelona02_flip-1_mt-on_MTS_seg-manual.nii.gz => sub-barcelona02_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-barcelona02/anat/{sub-barcelona02_flip-2_mt-off_MTS_seg-manual.json => sub-barcelona02_flip-2_mt-off_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-barcelona02/anat/{sub-barcelona02_flip-2_mt-off_MTS_seg-manual.nii.gz => sub-barcelona02_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-barcelona02/anat/{sub-barcelona02_T1w_labels-disc-manual.json => sub-barcelona02_space-other_T1w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-barcelona02/anat/{sub-barcelona02_T1w_labels-disc-manual.nii.gz => sub-barcelona02_space-other_T1w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-barcelona02/anat/{sub-barcelona02_T1w_seg-manual.json => sub-barcelona02_space-other_T1w_seg-manual.json} (100%) rename derivatives/labels/sub-barcelona02/anat/{sub-barcelona02_T1w_seg-manual.nii.gz => sub-barcelona02_space-other_T1w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-barcelona02/anat/{sub-barcelona02_T2star_seg-manual.json => sub-barcelona02_space-other_T2star_seg-manual.json} (100%) rename derivatives/labels/sub-barcelona02/anat/{sub-barcelona02_T2star_seg-manual.nii.gz => sub-barcelona02_space-other_T2star_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-barcelona02/anat/{sub-barcelona02_T2w_labels-disc-manual.json => sub-barcelona02_space-other_T2w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-barcelona02/anat/{sub-barcelona02_T2w_labels-disc-manual.nii.gz => sub-barcelona02_space-other_T2w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-barcelona02/anat/{sub-barcelona02_flip-1_mt-on_MTS_seg-manual.json => sub-barcelona02_space-other_T2w_seg-manual.json} (100%) rename derivatives/labels/sub-barcelona02/anat/{sub-barcelona02_T2w_seg-manual.nii.gz => sub-barcelona02_space-other_T2w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-barcelona03/anat/{sub-barcelona03_flip-1_mt-on_MTS_seg-manual.json => sub-barcelona03_flip-1_mt-on_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-barcelona03/anat/{sub-barcelona03_flip-1_mt-on_MTS_seg-manual.nii.gz => sub-barcelona03_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-barcelona03/anat/{sub-barcelona03_flip-2_mt-off_MTS_seg-manual.json => sub-barcelona03_flip-2_mt-off_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-barcelona03/anat/{sub-barcelona03_flip-2_mt-off_MTS_seg-manual.nii.gz => sub-barcelona03_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-barcelona03/anat/{sub-barcelona03_T1w_labels-disc-manual.json => sub-barcelona03_space-other_T1w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-barcelona03/anat/{sub-barcelona03_T1w_labels-disc-manual.nii.gz => sub-barcelona03_space-other_T1w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-barcelona03/anat/{sub-barcelona03_T1w_seg-manual.json => sub-barcelona03_space-other_T1w_seg-manual.json} (100%) rename derivatives/labels/sub-barcelona03/anat/{sub-barcelona03_T1w_seg-manual.nii.gz => sub-barcelona03_space-other_T1w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-barcelona03/anat/{sub-barcelona03_T2star_seg-manual.json => sub-barcelona03_space-other_T2star_seg-manual.json} (100%) rename derivatives/labels/sub-barcelona03/anat/{sub-barcelona03_T2star_seg-manual.nii.gz => sub-barcelona03_space-other_T2star_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-barcelona03/anat/{sub-barcelona03_T2w_labels-disc-manual.json => sub-barcelona03_space-other_T2w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-barcelona03/anat/{sub-barcelona03_T2w_labels-disc-manual.nii.gz => sub-barcelona03_space-other_T2w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-barcelona03/anat/{sub-barcelona03_T2w_seg-manual.json => sub-barcelona03_space-other_T2w_seg-manual.json} (100%) rename derivatives/labels/sub-barcelona03/anat/{sub-barcelona03_T2w_seg-manual.nii.gz => sub-barcelona03_space-other_T2w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-barcelona04/anat/{sub-barcelona04_flip-1_mt-on_MTS_seg-manual.json => sub-barcelona04_flip-1_mt-on_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-barcelona04/anat/{sub-barcelona04_flip-1_mt-on_MTS_seg-manual.nii.gz => sub-barcelona04_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-barcelona04/anat/{sub-barcelona04_T2w_seg-manual.json => sub-barcelona04_flip-2_mt-off_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-barcelona04/anat/{sub-barcelona04_flip-2_mt-off_MTS_seg-manual.nii.gz => sub-barcelona04_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-barcelona04/anat/{sub-barcelona04_T1w_labels-disc-manual.json => sub-barcelona04_space-other_T1w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-barcelona04/anat/{sub-barcelona04_T1w_labels-disc-manual.nii.gz => sub-barcelona04_space-other_T1w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-barcelona04/anat/{sub-barcelona04_T1w_seg-manual.json => sub-barcelona04_space-other_T1w_seg-manual.json} (100%) rename derivatives/labels/sub-barcelona04/anat/{sub-barcelona04_T1w_seg-manual.nii.gz => sub-barcelona04_space-other_T1w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-barcelona04/anat/{sub-barcelona04_T2star_seg-manual.json => sub-barcelona04_space-other_T2star_seg-manual.json} (100%) rename derivatives/labels/sub-barcelona04/anat/{sub-barcelona04_T2star_seg-manual.nii.gz => sub-barcelona04_space-other_T2star_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-barcelona04/anat/{sub-barcelona04_T2w_labels-disc-manual.json => sub-barcelona04_space-other_T2w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-barcelona04/anat/{sub-barcelona04_T2w_labels-disc-manual.nii.gz => sub-barcelona04_space-other_T2w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-barcelona04/anat/{sub-barcelona04_flip-2_mt-off_MTS_seg-manual.json => sub-barcelona04_space-other_T2w_seg-manual.json} (100%) rename derivatives/labels/sub-barcelona04/anat/{sub-barcelona04_T2w_seg-manual.nii.gz => sub-barcelona04_space-other_T2w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-barcelona05/anat/{sub-barcelona05_flip-1_mt-on_MTS_seg-manual.json => sub-barcelona05_flip-1_mt-on_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-barcelona05/anat/{sub-barcelona05_flip-1_mt-on_MTS_seg-manual.nii.gz => sub-barcelona05_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-barcelona05/anat/{sub-barcelona05_flip-2_mt-off_MTS_seg-manual.json => sub-barcelona05_flip-2_mt-off_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-barcelona05/anat/{sub-barcelona05_flip-2_mt-off_MTS_seg-manual.nii.gz => sub-barcelona05_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-barcelona05/anat/{sub-barcelona05_T1w_labels-disc-manual.json => sub-barcelona05_space-other_T1w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-barcelona05/anat/{sub-barcelona05_T1w_labels-disc-manual.nii.gz => sub-barcelona05_space-other_T1w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-barcelona05/anat/{sub-barcelona05_T1w_seg-manual.json => sub-barcelona05_space-other_T1w_seg-manual.json} (100%) rename derivatives/labels/sub-barcelona05/anat/{sub-barcelona05_T1w_seg-manual.nii.gz => sub-barcelona05_space-other_T1w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-barcelona05/anat/{sub-barcelona05_T2star_seg-manual.json => sub-barcelona05_space-other_T2star_seg-manual.json} (100%) rename derivatives/labels/sub-barcelona05/anat/{sub-barcelona05_T2star_seg-manual.nii.gz => sub-barcelona05_space-other_T2star_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-barcelona05/anat/{sub-barcelona05_T2w_csfseg-manual.json => sub-barcelona05_space-other_T2w_csfseg-manual.json} (100%) rename derivatives/labels/sub-barcelona05/anat/{sub-barcelona05_T2w_csfseg-manual.nii.gz => sub-barcelona05_space-other_T2w_csfseg-manual.nii.gz} (100%) rename derivatives/labels/sub-barcelona05/anat/{sub-barcelona05_T2w_labels-disc-manual.json => sub-barcelona05_space-other_T2w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-barcelona05/anat/{sub-barcelona05_T2w_labels-disc-manual.nii.gz => sub-barcelona05_space-other_T2w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-barcelona05/anat/{sub-barcelona05_T2w_seg-manual.json => sub-barcelona05_space-other_T2w_seg-manual.json} (100%) rename derivatives/labels/sub-barcelona05/anat/{sub-barcelona05_T2w_seg-manual.nii.gz => sub-barcelona05_space-other_T2w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-barcelona06/anat/{sub-barcelona06_T2w_seg-manual.json => sub-barcelona06_flip-1_mt-on_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-barcelona06/anat/{sub-barcelona06_flip-1_mt-on_MTS_seg-manual.nii.gz => sub-barcelona06_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-barcelona06/anat/{sub-barcelona06_flip-2_mt-off_MTS_seg-manual.json => sub-barcelona06_flip-2_mt-off_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-barcelona06/anat/{sub-barcelona06_flip-2_mt-off_MTS_seg-manual.nii.gz => sub-barcelona06_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-barcelona06/anat/{sub-barcelona06_T1w_labels-disc-manual.json => sub-barcelona06_space-other_T1w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-barcelona06/anat/{sub-barcelona06_T1w_labels-disc-manual.nii.gz => sub-barcelona06_space-other_T1w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-barcelona06/anat/{sub-barcelona06_T1w_seg-manual.json => sub-barcelona06_space-other_T1w_seg-manual.json} (100%) rename derivatives/labels/sub-barcelona06/anat/{sub-barcelona06_T1w_seg-manual.nii.gz => sub-barcelona06_space-other_T1w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-barcelona06/anat/{sub-barcelona06_T2star_seg-manual.json => sub-barcelona06_space-other_T2star_seg-manual.json} (100%) rename derivatives/labels/sub-barcelona06/anat/{sub-barcelona06_T2star_seg-manual.nii.gz => sub-barcelona06_space-other_T2star_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-barcelona06/anat/{sub-barcelona06_T2w_labels-disc-manual.json => sub-barcelona06_space-other_T2w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-barcelona06/anat/{sub-barcelona06_T2w_labels-disc-manual.nii.gz => sub-barcelona06_space-other_T2w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-barcelona06/anat/{sub-barcelona06_flip-1_mt-on_MTS_seg-manual.json => sub-barcelona06_space-other_T2w_seg-manual.json} (100%) rename derivatives/labels/sub-barcelona06/anat/{sub-barcelona06_T2w_seg-manual.nii.gz => sub-barcelona06_space-other_T2w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-beijingGE01/anat/{sub-beijingGE01_T1w_labels-disc-manual.json => sub-beijingGE01_space-other_T1w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-beijingGE01/anat/{sub-beijingGE01_T1w_labels-disc-manual.nii.gz => sub-beijingGE01_space-other_T1w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-beijingGE01/anat/{sub-beijingGE01_T1w_seg-manual.json => sub-beijingGE01_space-other_T1w_seg-manual.json} (100%) rename derivatives/labels/sub-beijingGE01/anat/{sub-beijingGE01_T1w_seg-manual.nii.gz => sub-beijingGE01_space-other_T1w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-beijingGE01/anat/{sub-beijingGE01_T2star_seg-manual.json => sub-beijingGE01_space-other_T2star_seg-manual.json} (100%) rename derivatives/labels/sub-beijingGE01/anat/{sub-beijingGE01_T2star_seg-manual.nii.gz => sub-beijingGE01_space-other_T2star_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-beijingGE01/anat/{sub-beijingGE01_T2w_labels-disc-manual.json => sub-beijingGE01_space-other_T2w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-beijingGE01/anat/{sub-beijingGE01_T2w_labels-disc-manual.nii.gz => sub-beijingGE01_space-other_T2w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-beijingGE01/anat/{sub-beijingGE01_T2w_seg-manual.json => sub-beijingGE01_space-other_T2w_seg-manual.json} (100%) rename derivatives/labels/sub-beijingGE01/anat/{sub-beijingGE01_T2w_seg-manual.nii.gz => sub-beijingGE01_space-other_T2w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-beijingGE02/anat/{sub-beijingGE02_T1w_labels-disc-manual.json => sub-beijingGE02_space-other_T1w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-beijingGE02/anat/{sub-beijingGE02_T1w_labels-disc-manual.nii.gz => sub-beijingGE02_space-other_T1w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-beijingGE02/anat/{sub-beijingGE02_T1w_seg-manual.json => sub-beijingGE02_space-other_T1w_seg-manual.json} (100%) rename derivatives/labels/sub-beijingGE02/anat/{sub-beijingGE02_T1w_seg-manual.nii.gz => sub-beijingGE02_space-other_T1w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-beijingGE02/anat/{sub-beijingGE02_T2star_seg-manual.json => sub-beijingGE02_space-other_T2star_seg-manual.json} (100%) rename derivatives/labels/sub-beijingGE02/anat/{sub-beijingGE02_T2star_seg-manual.nii.gz => sub-beijingGE02_space-other_T2star_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-beijingGE02/anat/{sub-beijingGE02_T2w_labels-disc-manual.json => sub-beijingGE02_space-other_T2w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-beijingGE02/anat/{sub-beijingGE02_T2w_labels-disc-manual.nii.gz => sub-beijingGE02_space-other_T2w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-beijingGE02/anat/{sub-beijingGE02_T2w_seg-manual.json => sub-beijingGE02_space-other_T2w_seg-manual.json} (100%) rename derivatives/labels/sub-beijingGE02/anat/{sub-beijingGE02_T2w_seg-manual.nii.gz => sub-beijingGE02_space-other_T2w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-beijingGE03/anat/{sub-beijingGE03_T1w_labels-disc-manual.json => sub-beijingGE03_space-other_T1w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-beijingGE03/anat/{sub-beijingGE03_T1w_labels-disc-manual.nii.gz => sub-beijingGE03_space-other_T1w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-beijingGE03/anat/{sub-beijingGE03_T1w_seg-manual.json => sub-beijingGE03_space-other_T1w_seg-manual.json} (100%) rename derivatives/labels/sub-beijingGE03/anat/{sub-beijingGE03_T1w_seg-manual.nii.gz => sub-beijingGE03_space-other_T1w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-beijingGE03/anat/{sub-beijingGE03_T2star_seg-manual.json => sub-beijingGE03_space-other_T2star_seg-manual.json} (100%) rename derivatives/labels/sub-beijingGE03/anat/{sub-beijingGE03_T2star_seg-manual.nii.gz => sub-beijingGE03_space-other_T2star_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-beijingGE03/anat/{sub-beijingGE03_T2w_labels-disc-manual.json => sub-beijingGE03_space-other_T2w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-beijingGE03/anat/{sub-beijingGE03_T2w_labels-disc-manual.nii.gz => sub-beijingGE03_space-other_T2w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-beijingGE03/anat/{sub-beijingGE03_T2w_seg-manual.json => sub-beijingGE03_space-other_T2w_seg-manual.json} (100%) rename derivatives/labels/sub-beijingGE03/anat/{sub-beijingGE03_T2w_seg-manual.nii.gz => sub-beijingGE03_space-other_T2w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-beijingGE04/anat/{sub-beijingGE04_T1w_labels-disc-manual.json => sub-beijingGE04_space-other_T1w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-beijingGE04/anat/{sub-beijingGE04_T1w_labels-disc-manual.nii.gz => sub-beijingGE04_space-other_T1w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-beijingGE04/anat/{sub-beijingGE04_T1w_seg-manual.json => sub-beijingGE04_space-other_T1w_seg-manual.json} (100%) rename derivatives/labels/sub-beijingGE04/anat/{sub-beijingGE04_T1w_seg-manual.nii.gz => sub-beijingGE04_space-other_T1w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-beijingGE04/anat/{sub-beijingGE04_T2w_labels-disc-manual.json => sub-beijingGE04_space-other_T2w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-beijingGE04/anat/{sub-beijingGE04_T2w_labels-disc-manual.nii.gz => sub-beijingGE04_space-other_T2w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-beijingGE04/anat/{sub-beijingGE04_T2w_seg-manual.json => sub-beijingGE04_space-other_T2w_seg-manual.json} (100%) rename derivatives/labels/sub-beijingGE04/anat/{sub-beijingGE04_T2w_seg-manual.nii.gz => sub-beijingGE04_space-other_T2w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-beijingPrisma01/anat/{sub-beijingPrisma01_T2w_seg-manual.json => sub-beijingPrisma01_flip-1_mt-on_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-beijingPrisma01/anat/{sub-beijingPrisma01_flip-1_mt-on_MTS_seg-manual.nii.gz => sub-beijingPrisma01_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-beijingPrisma01/anat/{sub-beijingPrisma01_flip-2_mt-off_MTS_seg-manual.json => sub-beijingPrisma01_flip-2_mt-off_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-beijingPrisma01/anat/{sub-beijingPrisma01_flip-2_mt-off_MTS_seg-manual.nii.gz => sub-beijingPrisma01_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-beijingPrisma01/anat/{sub-beijingPrisma01_T1w_labels-disc-manual.json => sub-beijingPrisma01_space-other_T1w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-beijingPrisma01/anat/{sub-beijingPrisma01_T1w_labels-disc-manual.nii.gz => sub-beijingPrisma01_space-other_T1w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-beijingPrisma01/anat/{sub-beijingPrisma01_T1w_seg-manual.json => sub-beijingPrisma01_space-other_T1w_seg-manual.json} (100%) rename derivatives/labels/sub-beijingPrisma01/anat/{sub-beijingPrisma01_T1w_seg-manual.nii.gz => sub-beijingPrisma01_space-other_T1w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-beijingPrisma01/anat/{sub-beijingPrisma01_T2star_seg-manual.json => sub-beijingPrisma01_space-other_T2star_seg-manual.json} (100%) rename derivatives/labels/sub-beijingPrisma01/anat/{sub-beijingPrisma01_T2star_seg-manual.nii.gz => sub-beijingPrisma01_space-other_T2star_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-beijingPrisma01/anat/{sub-beijingPrisma01_T2w_labels-disc-manual.json => sub-beijingPrisma01_space-other_T2w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-beijingPrisma01/anat/{sub-beijingPrisma01_T2w_labels-disc-manual.nii.gz => sub-beijingPrisma01_space-other_T2w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-beijingPrisma01/anat/{sub-beijingPrisma01_flip-1_mt-on_MTS_seg-manual.json => sub-beijingPrisma01_space-other_T2w_seg-manual.json} (100%) rename derivatives/labels/sub-beijingPrisma01/anat/{sub-beijingPrisma01_T2w_seg-manual.nii.gz => sub-beijingPrisma01_space-other_T2w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-beijingPrisma02/anat/{sub-beijingPrisma02_flip-1_mt-on_MTS_seg-manual.json => sub-beijingPrisma02_flip-1_mt-on_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-beijingPrisma02/anat/{sub-beijingPrisma02_flip-1_mt-on_MTS_seg-manual.nii.gz => sub-beijingPrisma02_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-beijingPrisma02/anat/{sub-beijingPrisma02_flip-2_mt-off_MTS_seg-manual.json => sub-beijingPrisma02_flip-2_mt-off_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-beijingPrisma02/anat/{sub-beijingPrisma02_flip-2_mt-off_MTS_seg-manual.nii.gz => sub-beijingPrisma02_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-beijingPrisma02/anat/{sub-beijingPrisma02_T1w_labels-disc-manual.json => sub-beijingPrisma02_space-other_T1w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-beijingPrisma02/anat/{sub-beijingPrisma02_T1w_labels-disc-manual.nii.gz => sub-beijingPrisma02_space-other_T1w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-beijingPrisma02/anat/{sub-beijingPrisma02_T1w_seg-manual.json => sub-beijingPrisma02_space-other_T1w_seg-manual.json} (100%) rename derivatives/labels/sub-beijingPrisma02/anat/{sub-beijingPrisma02_T1w_seg-manual.nii.gz => sub-beijingPrisma02_space-other_T1w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-beijingPrisma02/anat/{sub-beijingPrisma02_T2star_seg-manual.json => sub-beijingPrisma02_space-other_T2star_seg-manual.json} (100%) rename derivatives/labels/sub-beijingPrisma02/anat/{sub-beijingPrisma02_T2star_seg-manual.nii.gz => sub-beijingPrisma02_space-other_T2star_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-beijingPrisma02/anat/{sub-beijingPrisma02_T2w_labels-disc-manual.json => sub-beijingPrisma02_space-other_T2w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-beijingPrisma02/anat/{sub-beijingPrisma02_T2w_labels-disc-manual.nii.gz => sub-beijingPrisma02_space-other_T2w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-beijingPrisma02/anat/{sub-beijingPrisma02_T2w_seg-manual.json => sub-beijingPrisma02_space-other_T2w_seg-manual.json} (100%) rename derivatives/labels/sub-beijingPrisma02/anat/{sub-beijingPrisma02_T2w_seg-manual.nii.gz => sub-beijingPrisma02_space-other_T2w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-beijingPrisma03/anat/{sub-beijingPrisma03_T2star_seg-manual.json => sub-beijingPrisma03_flip-1_mt-on_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-beijingPrisma03/anat/{sub-beijingPrisma03_flip-1_mt-on_MTS_seg-manual.nii.gz => sub-beijingPrisma03_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-beijingPrisma03/anat/{sub-beijingPrisma03_flip-2_mt-off_MTS_seg-manual.json => sub-beijingPrisma03_flip-2_mt-off_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-beijingPrisma03/anat/{sub-beijingPrisma03_flip-2_mt-off_MTS_seg-manual.nii.gz => sub-beijingPrisma03_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-beijingPrisma03/anat/{sub-beijingPrisma03_T1w_labels-disc-manual.json => sub-beijingPrisma03_space-other_T1w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-beijingPrisma03/anat/{sub-beijingPrisma03_T1w_labels-disc-manual.nii.gz => sub-beijingPrisma03_space-other_T1w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-beijingPrisma03/anat/{sub-beijingPrisma03_T1w_seg-manual.json => sub-beijingPrisma03_space-other_T1w_seg-manual.json} (100%) rename derivatives/labels/sub-beijingPrisma03/anat/{sub-beijingPrisma03_T1w_seg-manual.nii.gz => sub-beijingPrisma03_space-other_T1w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-beijingPrisma03/anat/{sub-beijingPrisma03_T2w_seg-manual.json => sub-beijingPrisma03_space-other_T2star_seg-manual.json} (100%) rename derivatives/labels/sub-beijingPrisma03/anat/{sub-beijingPrisma03_T2star_seg-manual.nii.gz => sub-beijingPrisma03_space-other_T2star_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-beijingPrisma03/anat/{sub-beijingPrisma03_T2w_labels-disc-manual.json => sub-beijingPrisma03_space-other_T2w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-beijingPrisma03/anat/{sub-beijingPrisma03_T2w_labels-disc-manual.nii.gz => sub-beijingPrisma03_space-other_T2w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-beijingPrisma03/anat/{sub-beijingPrisma03_flip-1_mt-on_MTS_seg-manual.json => sub-beijingPrisma03_space-other_T2w_seg-manual.json} (100%) rename derivatives/labels/sub-beijingPrisma03/anat/{sub-beijingPrisma03_T2w_seg-manual.nii.gz => sub-beijingPrisma03_space-other_T2w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-beijingPrisma04/anat/{sub-beijingPrisma04_flip-1_mt-on_MTS_seg-manual.json => sub-beijingPrisma04_flip-1_mt-on_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-beijingPrisma04/anat/{sub-beijingPrisma04_flip-1_mt-on_MTS_seg-manual.nii.gz => sub-beijingPrisma04_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-beijingPrisma04/anat/{sub-beijingPrisma04_flip-2_mt-off_MTS_seg-manual.json => sub-beijingPrisma04_flip-2_mt-off_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-beijingPrisma04/anat/{sub-beijingPrisma04_flip-2_mt-off_MTS_seg-manual.nii.gz => sub-beijingPrisma04_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-beijingPrisma04/anat/{sub-beijingPrisma04_T1w_labels-disc-manual.json => sub-beijingPrisma04_space-other_T1w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-beijingPrisma04/anat/{sub-beijingPrisma04_T1w_labels-disc-manual.nii.gz => sub-beijingPrisma04_space-other_T1w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-beijingPrisma04/anat/{sub-beijingPrisma04_T1w_seg-manual.json => sub-beijingPrisma04_space-other_T1w_seg-manual.json} (100%) rename derivatives/labels/sub-beijingPrisma04/anat/{sub-beijingPrisma04_T1w_seg-manual.nii.gz => sub-beijingPrisma04_space-other_T1w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-beijingPrisma04/anat/{sub-beijingPrisma04_T2star_seg-manual.json => sub-beijingPrisma04_space-other_T2star_seg-manual.json} (100%) rename derivatives/labels/sub-beijingPrisma04/anat/{sub-beijingPrisma04_T2star_seg-manual.nii.gz => sub-beijingPrisma04_space-other_T2star_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-beijingPrisma04/anat/{sub-beijingPrisma04_T2w_labels-disc-manual.json => sub-beijingPrisma04_space-other_T2w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-beijingPrisma04/anat/{sub-beijingPrisma04_T2w_labels-disc-manual.nii.gz => sub-beijingPrisma04_space-other_T2w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-beijingPrisma04/anat/{sub-beijingPrisma04_T2w_seg-manual.json => sub-beijingPrisma04_space-other_T2w_seg-manual.json} (100%) rename derivatives/labels/sub-beijingPrisma04/anat/{sub-beijingPrisma04_T2w_seg-manual.nii.gz => sub-beijingPrisma04_space-other_T2w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-beijingPrisma05/anat/{sub-beijingPrisma05_T2star_seg-manual.json => sub-beijingPrisma05_flip-1_mt-on_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-beijingPrisma05/anat/{sub-beijingPrisma05_flip-1_mt-on_MTS_seg-manual.nii.gz => sub-beijingPrisma05_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-beijingPrisma05/anat/{sub-beijingPrisma05_flip-1_mt-on_MTS_seg-manual.json => sub-beijingPrisma05_flip-2_mt-off_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-beijingPrisma05/anat/{sub-beijingPrisma05_flip-2_mt-off_MTS_seg-manual.nii.gz => sub-beijingPrisma05_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-beijingPrisma05/anat/{sub-beijingPrisma05_T1w_labels-disc-manual.json => sub-beijingPrisma05_space-other_T1w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-beijingPrisma05/anat/{sub-beijingPrisma05_T1w_labels-disc-manual.nii.gz => sub-beijingPrisma05_space-other_T1w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-beijingPrisma05/anat/{sub-beijingPrisma05_T1w_seg-manual.json => sub-beijingPrisma05_space-other_T1w_seg-manual.json} (100%) rename derivatives/labels/sub-beijingPrisma05/anat/{sub-beijingPrisma05_T1w_seg-manual.nii.gz => sub-beijingPrisma05_space-other_T1w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-beijingPrisma05/anat/{sub-beijingPrisma05_flip-2_mt-off_MTS_seg-manual.json => sub-beijingPrisma05_space-other_T2star_seg-manual.json} (100%) rename derivatives/labels/sub-beijingPrisma05/anat/{sub-beijingPrisma05_T2star_seg-manual.nii.gz => sub-beijingPrisma05_space-other_T2star_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-beijingPrisma05/anat/{sub-beijingPrisma05_T2w_labels-disc-manual.json => sub-beijingPrisma05_space-other_T2w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-beijingPrisma05/anat/{sub-beijingPrisma05_T2w_labels-disc-manual.nii.gz => sub-beijingPrisma05_space-other_T2w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-beijingPrisma05/anat/{sub-beijingPrisma05_T2w_seg-manual.json => sub-beijingPrisma05_space-other_T2w_seg-manual.json} (100%) rename derivatives/labels/sub-beijingPrisma05/anat/{sub-beijingPrisma05_T2w_seg-manual.nii.gz => sub-beijingPrisma05_space-other_T2w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-beijingVerio01/anat/{sub-beijingVerio01_T1w_labels-disc-manual.json => sub-beijingVerio01_space-other_T1w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-beijingVerio01/anat/{sub-beijingVerio01_T1w_labels-disc-manual.nii.gz => sub-beijingVerio01_space-other_T1w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-beijingVerio01/anat/{sub-beijingVerio01_T1w_seg-manual.json => sub-beijingVerio01_space-other_T1w_seg-manual.json} (100%) rename derivatives/labels/sub-beijingVerio01/anat/{sub-beijingVerio01_T1w_seg-manual.nii.gz => sub-beijingVerio01_space-other_T1w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-beijingVerio01/anat/{sub-beijingVerio01_T2star_seg-manual.json => sub-beijingVerio01_space-other_T2star_seg-manual.json} (100%) rename derivatives/labels/sub-beijingVerio01/anat/{sub-beijingVerio01_T2star_seg-manual.nii.gz => sub-beijingVerio01_space-other_T2star_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-beijingVerio01/anat/{sub-beijingVerio01_T2w_labels-disc-manual.json => sub-beijingVerio01_space-other_T2w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-beijingVerio01/anat/{sub-beijingVerio01_T2w_labels-disc-manual.nii.gz => sub-beijingVerio01_space-other_T2w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-beijingVerio01/anat/{sub-beijingVerio01_T2w_seg-manual.json => sub-beijingVerio01_space-other_T2w_seg-manual.json} (100%) rename derivatives/labels/sub-beijingVerio01/anat/{sub-beijingVerio01_T2w_seg-manual.nii.gz => sub-beijingVerio01_space-other_T2w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-beijingVerio02/anat/{sub-beijingVerio02_T1w_labels-disc-manual.json => sub-beijingVerio02_space-other_T1w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-beijingVerio02/anat/{sub-beijingVerio02_T1w_labels-disc-manual.nii.gz => sub-beijingVerio02_space-other_T1w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-beijingVerio02/anat/{sub-beijingVerio02_T1w_seg-manual.json => sub-beijingVerio02_space-other_T1w_seg-manual.json} (100%) rename derivatives/labels/sub-beijingVerio02/anat/{sub-beijingVerio02_T1w_seg-manual.nii.gz => sub-beijingVerio02_space-other_T1w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-beijingVerio02/anat/{sub-beijingVerio02_T2star_seg-manual.json => sub-beijingVerio02_space-other_T2star_seg-manual.json} (100%) rename derivatives/labels/sub-beijingVerio02/anat/{sub-beijingVerio02_T2star_seg-manual.nii.gz => sub-beijingVerio02_space-other_T2star_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-beijingVerio02/anat/{sub-beijingVerio02_T2w_labels-disc-manual.json => sub-beijingVerio02_space-other_T2w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-beijingVerio02/anat/{sub-beijingVerio02_T2w_labels-disc-manual.nii.gz => sub-beijingVerio02_space-other_T2w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-beijingVerio02/anat/{sub-beijingVerio02_T2w_seg-manual.json => sub-beijingVerio02_space-other_T2w_seg-manual.json} (100%) rename derivatives/labels/sub-beijingVerio02/anat/{sub-beijingVerio02_T2w_seg-manual.nii.gz => sub-beijingVerio02_space-other_T2w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-beijingVerio03/anat/{sub-beijingVerio03_T1w_RPI_r_labels-manual.nii.gz => sub-beijingVerio03_space-other_T1w_RPI_r_labels-manual.nii.gz} (100%) rename derivatives/labels/sub-beijingVerio03/anat/{sub-beijingVerio03_T1w_labels-disc-manual.json => sub-beijingVerio03_space-other_T1w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-beijingVerio03/anat/{sub-beijingVerio03_T1w_labels-disc-manual.nii.gz => sub-beijingVerio03_space-other_T1w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-beijingVerio03/anat/{sub-beijingVerio03_T1w_seg-manual.json => sub-beijingVerio03_space-other_T1w_seg-manual.json} (100%) rename derivatives/labels/sub-beijingVerio03/anat/{sub-beijingVerio03_T1w_seg-manual.nii.gz => sub-beijingVerio03_space-other_T1w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-beijingVerio03/anat/{sub-beijingVerio03_T2star_seg-manual.json => sub-beijingVerio03_space-other_T2star_seg-manual.json} (100%) rename derivatives/labels/sub-beijingVerio03/anat/{sub-beijingVerio03_T2star_seg-manual.nii.gz => sub-beijingVerio03_space-other_T2star_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-beijingVerio03/anat/{sub-beijingVerio03_T2w_labels-disc-manual.json => sub-beijingVerio03_space-other_T2w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-beijingVerio03/anat/{sub-beijingVerio03_T2w_labels-disc-manual.nii.gz => sub-beijingVerio03_space-other_T2w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-beijingVerio03/anat/{sub-beijingVerio03_T2w_seg-manual.json => sub-beijingVerio03_space-other_T2w_seg-manual.json} (100%) rename derivatives/labels/sub-beijingVerio03/anat/{sub-beijingVerio03_T2w_seg-manual.nii.gz => sub-beijingVerio03_space-other_T2w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-beijingVerio04/anat/{sub-beijingVerio04_T1w_labels-disc-manual.json => sub-beijingVerio04_space-other_T1w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-beijingVerio04/anat/{sub-beijingVerio04_T1w_labels-disc-manual.nii.gz => sub-beijingVerio04_space-other_T1w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-beijingVerio04/anat/{sub-beijingVerio04_T1w_seg-manual.json => sub-beijingVerio04_space-other_T1w_seg-manual.json} (100%) rename derivatives/labels/sub-beijingVerio04/anat/{sub-beijingVerio04_T1w_seg-manual.nii.gz => sub-beijingVerio04_space-other_T1w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-beijingVerio04/anat/{sub-beijingVerio04_T2star_seg-manual.json => sub-beijingVerio04_space-other_T2star_seg-manual.json} (100%) rename derivatives/labels/sub-beijingVerio04/anat/{sub-beijingVerio04_T2star_seg-manual.nii.gz => sub-beijingVerio04_space-other_T2star_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-beijingVerio04/anat/{sub-beijingVerio04_T2w_labels-disc-manual.json => sub-beijingVerio04_space-other_T2w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-beijingVerio04/anat/{sub-beijingVerio04_T2w_labels-disc-manual.nii.gz => sub-beijingVerio04_space-other_T2w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-beijingVerio04/anat/{sub-beijingVerio04_T2w_seg-manual.json => sub-beijingVerio04_space-other_T2w_seg-manual.json} (100%) rename derivatives/labels/sub-beijingVerio04/anat/{sub-beijingVerio04_T2w_seg-manual.nii.gz => sub-beijingVerio04_space-other_T2w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-brnoCeitec01/anat/{sub-brnoCeitec01_T2star_seg-manual.json => sub-brnoCeitec01_flip-1_mt-on_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-brnoCeitec01/anat/{sub-brnoCeitec01_flip-1_mt-on_MTS_seg-manual.nii.gz => sub-brnoCeitec01_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-brnoCeitec01/anat/{sub-brnoCeitec01_T2w_seg-manual.json => sub-brnoCeitec01_flip-2_mt-off_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-brnoCeitec01/anat/{sub-brnoCeitec01_flip-2_mt-off_MTS_seg-manual.nii.gz => sub-brnoCeitec01_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-brnoCeitec01/anat/{sub-brnoCeitec01_T1w_labels-disc-manual.json => sub-brnoCeitec01_space-other_T1w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-brnoCeitec01/anat/{sub-brnoCeitec01_T1w_labels-disc-manual.nii.gz => sub-brnoCeitec01_space-other_T1w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-brnoCeitec01/anat/{sub-brnoCeitec01_T1w_seg-manual.json => sub-brnoCeitec01_space-other_T1w_seg-manual.json} (100%) rename derivatives/labels/sub-brnoCeitec01/anat/{sub-brnoCeitec01_T1w_seg-manual.nii.gz => sub-brnoCeitec01_space-other_T1w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-brnoCeitec01/anat/{sub-brnoCeitec01_flip-1_mt-on_MTS_seg-manual.json => sub-brnoCeitec01_space-other_T2star_seg-manual.json} (100%) rename derivatives/labels/sub-brnoCeitec01/anat/{sub-brnoCeitec01_T2star_seg-manual.nii.gz => sub-brnoCeitec01_space-other_T2star_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-brnoCeitec01/anat/{sub-brnoCeitec01_T2w_labels-disc-manual.json => sub-brnoCeitec01_space-other_T2w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-brnoCeitec01/anat/{sub-brnoCeitec01_T2w_labels-disc-manual.nii.gz => sub-brnoCeitec01_space-other_T2w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-brnoCeitec01/anat/{sub-brnoCeitec01_flip-2_mt-off_MTS_seg-manual.json => sub-brnoCeitec01_space-other_T2w_seg-manual.json} (100%) rename derivatives/labels/sub-brnoCeitec01/anat/{sub-brnoCeitec01_T2w_seg-manual.nii.gz => sub-brnoCeitec01_space-other_T2w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-brnoCeitec02/anat/{sub-brnoCeitec02_flip-1_mt-on_MTS_seg-manual.json => sub-brnoCeitec02_flip-1_mt-on_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-brnoCeitec02/anat/{sub-brnoCeitec02_flip-1_mt-on_MTS_seg-manual.nii.gz => sub-brnoCeitec02_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-brnoCeitec02/anat/{sub-brnoCeitec02_T2star_seg-manual.json => sub-brnoCeitec02_flip-2_mt-off_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-brnoCeitec02/anat/{sub-brnoCeitec02_flip-2_mt-off_MTS_seg-manual.nii.gz => sub-brnoCeitec02_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-brnoCeitec02/anat/{sub-brnoCeitec02_T1w_labels-disc-manual.json => sub-brnoCeitec02_space-other_T1w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-brnoCeitec02/anat/{sub-brnoCeitec02_T1w_labels-disc-manual.nii.gz => sub-brnoCeitec02_space-other_T1w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-brnoCeitec02/anat/{sub-brnoCeitec02_T1w_seg-manual.json => sub-brnoCeitec02_space-other_T1w_seg-manual.json} (100%) rename derivatives/labels/sub-brnoCeitec02/anat/{sub-brnoCeitec02_T1w_seg-manual.nii.gz => sub-brnoCeitec02_space-other_T1w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-brnoCeitec02/anat/{sub-brnoCeitec02_flip-2_mt-off_MTS_seg-manual.json => sub-brnoCeitec02_space-other_T2star_seg-manual.json} (100%) rename derivatives/labels/sub-brnoCeitec02/anat/{sub-brnoCeitec02_T2star_seg-manual.nii.gz => sub-brnoCeitec02_space-other_T2star_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-brnoCeitec02/anat/{sub-brnoCeitec02_T2w_labels-disc-manual.json => sub-brnoCeitec02_space-other_T2w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-brnoCeitec02/anat/{sub-brnoCeitec02_T2w_labels-disc-manual.nii.gz => sub-brnoCeitec02_space-other_T2w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-brnoCeitec02/anat/{sub-brnoCeitec02_T2w_seg-manual.json => sub-brnoCeitec02_space-other_T2w_seg-manual.json} (100%) rename derivatives/labels/sub-brnoCeitec02/anat/{sub-brnoCeitec02_T2w_seg-manual.nii.gz => sub-brnoCeitec02_space-other_T2w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-brnoCeitec03/anat/{sub-brnoCeitec03_T2star_seg-manual.json => sub-brnoCeitec03_flip-1_mt-on_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-brnoCeitec03/anat/{sub-brnoCeitec03_flip-1_mt-on_MTS_seg-manual.nii.gz => sub-brnoCeitec03_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-brnoCeitec03/anat/{sub-brnoCeitec03_T2w_seg-manual.json => sub-brnoCeitec03_flip-2_mt-off_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-brnoCeitec03/anat/{sub-brnoCeitec03_flip-2_mt-off_MTS_seg-manual.nii.gz => sub-brnoCeitec03_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-brnoCeitec03/anat/{sub-brnoCeitec03_T1w_labels-disc-manual.json => sub-brnoCeitec03_space-other_T1w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-brnoCeitec03/anat/{sub-brnoCeitec03_T1w_labels-disc-manual.nii.gz => sub-brnoCeitec03_space-other_T1w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-brnoCeitec03/anat/{sub-brnoCeitec03_T1w_seg-manual.json => sub-brnoCeitec03_space-other_T1w_seg-manual.json} (100%) rename derivatives/labels/sub-brnoCeitec03/anat/{sub-brnoCeitec03_T1w_seg-manual.nii.gz => sub-brnoCeitec03_space-other_T1w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-brnoCeitec03/anat/{sub-brnoCeitec03_flip-1_mt-on_MTS_seg-manual.json => sub-brnoCeitec03_space-other_T2star_seg-manual.json} (100%) rename derivatives/labels/sub-brnoCeitec03/anat/{sub-brnoCeitec03_T2star_seg-manual.nii.gz => sub-brnoCeitec03_space-other_T2star_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-brnoCeitec03/anat/{sub-brnoCeitec03_T2w_labels-disc-manual.json => sub-brnoCeitec03_space-other_T2w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-brnoCeitec03/anat/{sub-brnoCeitec03_T2w_labels-disc-manual.nii.gz => sub-brnoCeitec03_space-other_T2w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-brnoCeitec03/anat/{sub-brnoCeitec03_flip-2_mt-off_MTS_seg-manual.json => sub-brnoCeitec03_space-other_T2w_seg-manual.json} (100%) rename derivatives/labels/sub-brnoCeitec03/anat/{sub-brnoCeitec03_T2w_seg-manual.nii.gz => sub-brnoCeitec03_space-other_T2w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-brnoCeitec04/anat/{sub-brnoCeitec04_T2star_seg-manual.json => sub-brnoCeitec04_flip-1_mt-on_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-brnoCeitec04/anat/{sub-brnoCeitec04_flip-1_mt-on_MTS_seg-manual.nii.gz => sub-brnoCeitec04_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-brnoCeitec04/anat/{sub-brnoCeitec04_flip-2_mt-off_MTS_seg-manual.json => sub-brnoCeitec04_flip-2_mt-off_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-brnoCeitec04/anat/{sub-brnoCeitec04_flip-2_mt-off_MTS_seg-manual.nii.gz => sub-brnoCeitec04_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-brnoCeitec04/anat/{sub-brnoCeitec04_T1w_labels-disc-manual.json => sub-brnoCeitec04_space-other_T1w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-brnoCeitec04/anat/{sub-brnoCeitec04_T1w_labels-disc-manual.nii.gz => sub-brnoCeitec04_space-other_T1w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-brnoCeitec04/anat/{sub-brnoCeitec04_T1w_seg-manual.json => sub-brnoCeitec04_space-other_T1w_seg-manual.json} (100%) rename derivatives/labels/sub-brnoCeitec04/anat/{sub-brnoCeitec04_T1w_seg-manual.nii.gz => sub-brnoCeitec04_space-other_T1w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-brnoCeitec04/anat/{sub-brnoCeitec04_flip-1_mt-on_MTS_seg-manual.json => sub-brnoCeitec04_space-other_T2star_seg-manual.json} (100%) rename derivatives/labels/sub-brnoCeitec04/anat/{sub-brnoCeitec04_T2star_seg-manual.nii.gz => sub-brnoCeitec04_space-other_T2star_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-brnoCeitec04/anat/{sub-brnoCeitec04_T2w_labels-disc-manual.json => sub-brnoCeitec04_space-other_T2w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-brnoCeitec04/anat/{sub-brnoCeitec04_T2w_labels-disc-manual.nii.gz => sub-brnoCeitec04_space-other_T2w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-brnoCeitec04/anat/{sub-brnoCeitec04_T2w_seg-manual.json => sub-brnoCeitec04_space-other_T2w_seg-manual.json} (100%) rename derivatives/labels/sub-brnoCeitec04/anat/{sub-brnoCeitec04_T2w_seg-manual.nii.gz => sub-brnoCeitec04_space-other_T2w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-brnoCeitec05/anat/{sub-brnoCeitec05_flip-1_mt-on_MTS_seg-manual.json => sub-brnoCeitec05_flip-1_mt-on_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-brnoCeitec05/anat/{sub-brnoCeitec05_flip-1_mt-on_MTS_seg-manual.nii.gz => sub-brnoCeitec05_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-brnoCeitec05/anat/{sub-brnoCeitec05_flip-2_mt-off_MTS_seg-manual.json => sub-brnoCeitec05_flip-2_mt-off_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-brnoCeitec05/anat/{sub-brnoCeitec05_flip-2_mt-off_MTS_seg-manual.nii.gz => sub-brnoCeitec05_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-brnoCeitec05/anat/{sub-brnoCeitec05_T1w_labels-disc-manual.json => sub-brnoCeitec05_space-other_T1w_labels-disc-manual.json} 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derivatives/labels/sub-brnoCeitec06/anat/{sub-brnoCeitec06_flip-2_mt-off_MTS_seg-manual.nii.gz => sub-brnoCeitec06_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-brnoCeitec06/anat/{sub-brnoCeitec06_T1w_labels-disc-manual.json => sub-brnoCeitec06_space-other_T1w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-brnoCeitec06/anat/{sub-brnoCeitec06_T1w_labels-disc-manual.nii.gz => sub-brnoCeitec06_space-other_T1w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-brnoCeitec06/anat/{sub-brnoCeitec06_T1w_seg-manual.json => sub-brnoCeitec06_space-other_T1w_seg-manual.json} (100%) rename derivatives/labels/sub-brnoCeitec06/anat/{sub-brnoCeitec06_T1w_seg-manual.nii.gz => sub-brnoCeitec06_space-other_T1w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-brnoCeitec06/anat/{sub-brnoCeitec06_flip-1_mt-on_MTS_seg-manual.json => sub-brnoCeitec06_space-other_T2star_seg-manual.json} (100%) rename derivatives/labels/sub-brnoCeitec06/anat/{sub-brnoCeitec06_T2star_seg-manual.nii.gz => sub-brnoCeitec06_space-other_T2star_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-brnoCeitec06/anat/{sub-brnoCeitec06_T2w_labels-disc-manual.json => sub-brnoCeitec06_space-other_T2w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-brnoCeitec06/anat/{sub-brnoCeitec06_T2w_labels-disc-manual.nii.gz => sub-brnoCeitec06_space-other_T2w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-brnoCeitec06/anat/{sub-brnoCeitec06_T2w_seg-manual.json => sub-brnoCeitec06_space-other_T2w_seg-manual.json} (100%) rename derivatives/labels/sub-brnoCeitec06/anat/{sub-brnoCeitec06_T2w_seg-manual.nii.gz => sub-brnoCeitec06_space-other_T2w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-brnoUhb01/anat/{sub-brnoUhb01_flip-1_mt-on_MTS_seg-manual.json => sub-brnoUhb01_flip-1_mt-on_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-brnoUhb01/anat/{sub-brnoUhb01_flip-1_mt-on_MTS_seg-manual.nii.gz => sub-brnoUhb01_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-brnoUhb01/anat/{sub-brnoUhb01_T2star_seg-manual.json => sub-brnoUhb01_flip-2_mt-off_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-brnoUhb01/anat/{sub-brnoUhb01_flip-2_mt-off_MTS_seg-manual.nii.gz => sub-brnoUhb01_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-brnoUhb01/anat/{sub-brnoUhb01_T1w_RPI_r_labels-manual.json => sub-brnoUhb01_space-other_T1w_RPI_r_labels-manual.json} (100%) rename derivatives/labels/sub-brnoUhb01/anat/{sub-brnoUhb01_T1w_RPI_r_labels-manual.nii.gz => sub-brnoUhb01_space-other_T1w_RPI_r_labels-manual.nii.gz} (100%) rename derivatives/labels/sub-brnoUhb01/anat/{sub-brnoUhb01_T1w_labels-disc-manual.json => sub-brnoUhb01_space-other_T1w_labels-disc-manual.json} (100%) rename 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sub-brnoUhb01_space-other_T2w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-brnoUhb01/anat/{sub-brnoUhb01_flip-2_mt-off_MTS_seg-manual.json => sub-brnoUhb01_space-other_T2w_seg-manual.json} (100%) rename derivatives/labels/sub-brnoUhb01/anat/{sub-brnoUhb01_T2w_seg-manual.nii.gz => sub-brnoUhb01_space-other_T2w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-brnoUhb02/anat/{sub-brnoUhb02_flip-1_mt-on_MTS_seg-manual.json => sub-brnoUhb02_flip-1_mt-on_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-brnoUhb02/anat/{sub-brnoUhb02_flip-1_mt-on_MTS_seg-manual.nii.gz => sub-brnoUhb02_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-brnoUhb02/anat/{sub-brnoUhb02_flip-2_mt-off_MTS_seg-manual.json => sub-brnoUhb02_flip-2_mt-off_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-brnoUhb02/anat/{sub-brnoUhb02_flip-2_mt-off_MTS_seg-manual.nii.gz => sub-brnoUhb02_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-brnoUhb02/anat/{sub-brnoUhb02_T1w_labels-disc-manual.json => sub-brnoUhb02_space-other_T1w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-brnoUhb02/anat/{sub-brnoUhb02_T1w_labels-disc-manual.nii.gz => sub-brnoUhb02_space-other_T1w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-brnoUhb02/anat/{sub-brnoUhb02_T1w_seg-manual.json => sub-brnoUhb02_space-other_T1w_seg-manual.json} (100%) rename derivatives/labels/sub-brnoUhb02/anat/{sub-brnoUhb02_T1w_seg-manual.nii.gz => sub-brnoUhb02_space-other_T1w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-brnoUhb02/anat/{sub-brnoUhb02_T2star_seg-manual.json => sub-brnoUhb02_space-other_T2star_seg-manual.json} (100%) rename derivatives/labels/sub-brnoUhb02/anat/{sub-brnoUhb02_T2star_seg-manual.nii.gz => sub-brnoUhb02_space-other_T2star_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-brnoUhb02/anat/{sub-brnoUhb02_T2w_labels-disc-manual.json => sub-brnoUhb02_space-other_T2w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-brnoUhb02/anat/{sub-brnoUhb02_T2w_labels-disc-manual.nii.gz => sub-brnoUhb02_space-other_T2w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-brnoUhb02/anat/{sub-brnoUhb02_T2w_seg-manual.json => sub-brnoUhb02_space-other_T2w_seg-manual.json} (100%) rename derivatives/labels/sub-brnoUhb02/anat/{sub-brnoUhb02_T2w_seg-manual.nii.gz => sub-brnoUhb02_space-other_T2w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-brnoUhb03/anat/{sub-brnoUhb03_flip-1_mt-on_MTS_seg-manual.json => sub-brnoUhb03_flip-1_mt-on_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-brnoUhb03/anat/{sub-brnoUhb03_flip-1_mt-on_MTS_seg-manual.nii.gz => sub-brnoUhb03_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-brnoUhb03/anat/{sub-brnoUhb03_flip-2_mt-off_MTS_seg-manual.json => sub-brnoUhb03_flip-2_mt-off_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-brnoUhb03/anat/{sub-brnoUhb03_flip-2_mt-off_MTS_seg-manual.nii.gz => sub-brnoUhb03_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-brnoUhb03/anat/{sub-brnoUhb03_T1w_labels-disc-manual.json => sub-brnoUhb03_space-other_T1w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-brnoUhb03/anat/{sub-brnoUhb03_T1w_labels-disc-manual.nii.gz => sub-brnoUhb03_space-other_T1w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-brnoUhb03/anat/{sub-brnoUhb03_T1w_seg-manual.json => sub-brnoUhb03_space-other_T1w_seg-manual.json} (100%) rename derivatives/labels/sub-brnoUhb03/anat/{sub-brnoUhb03_T1w_seg-manual.nii.gz => sub-brnoUhb03_space-other_T1w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-brnoUhb03/anat/{sub-brnoUhb03_T2star_seg-manual.json => sub-brnoUhb03_space-other_T2star_seg-manual.json} (100%) rename derivatives/labels/sub-brnoUhb03/anat/{sub-brnoUhb03_T2star_seg-manual.nii.gz => sub-brnoUhb03_space-other_T2star_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-brnoUhb03/anat/{sub-brnoUhb03_T2w_labels-disc-manual.json => sub-brnoUhb03_space-other_T2w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-brnoUhb03/anat/{sub-brnoUhb03_T2w_labels-disc-manual.nii.gz => sub-brnoUhb03_space-other_T2w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-brnoUhb03/anat/{sub-brnoUhb03_T2w_seg-manual.json => sub-brnoUhb03_space-other_T2w_seg-manual.json} (100%) rename derivatives/labels/sub-brnoUhb03/anat/{sub-brnoUhb03_T2w_seg-manual.nii.gz => sub-brnoUhb03_space-other_T2w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-brnoUhb04/anat/{sub-brnoUhb04_flip-1_mt-on_MTS_seg-manual.json => sub-brnoUhb04_flip-1_mt-on_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-brnoUhb04/anat/{sub-brnoUhb04_flip-1_mt-on_MTS_seg-manual.nii.gz => sub-brnoUhb04_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-brnoUhb04/anat/{sub-brnoUhb04_flip-2_mt-off_MTS_seg-manual.json => sub-brnoUhb04_flip-2_mt-off_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-brnoUhb04/anat/{sub-brnoUhb04_flip-2_mt-off_MTS_seg-manual.nii.gz => sub-brnoUhb04_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-brnoUhb04/anat/{sub-brnoUhb04_T1w_labels-disc-manual.json => sub-brnoUhb04_space-other_T1w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-brnoUhb04/anat/{sub-brnoUhb04_T1w_labels-disc-manual.nii.gz => sub-brnoUhb04_space-other_T1w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-brnoUhb04/anat/{sub-brnoUhb04_T1w_seg-manual.json => sub-brnoUhb04_space-other_T1w_seg-manual.json} (100%) rename derivatives/labels/sub-brnoUhb04/anat/{sub-brnoUhb04_T1w_seg-manual.nii.gz => sub-brnoUhb04_space-other_T1w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-brnoUhb04/anat/{sub-brnoUhb04_T2star_seg-manual.json => sub-brnoUhb04_space-other_T2star_seg-manual.json} (100%) rename derivatives/labels/sub-brnoUhb04/anat/{sub-brnoUhb04_T2star_seg-manual.nii.gz => sub-brnoUhb04_space-other_T2star_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-brnoUhb04/anat/{sub-brnoUhb04_T2w_labels-disc-manual.json => sub-brnoUhb04_space-other_T2w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-brnoUhb04/anat/{sub-brnoUhb04_T2w_labels-disc-manual.nii.gz => sub-brnoUhb04_space-other_T2w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-brnoUhb04/anat/{sub-brnoUhb04_T2w_seg-manual.json => sub-brnoUhb04_space-other_T2w_seg-manual.json} (100%) rename derivatives/labels/sub-brnoUhb04/anat/{sub-brnoUhb04_T2w_seg-manual.nii.gz => sub-brnoUhb04_space-other_T2w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-brnoUhb05/anat/{sub-brnoUhb05_flip-1_mt-on_MTS_seg-manual.json => sub-brnoUhb05_flip-1_mt-on_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-brnoUhb05/anat/{sub-brnoUhb05_flip-1_mt-on_MTS_seg-manual.nii.gz => sub-brnoUhb05_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-brnoUhb05/anat/{sub-brnoUhb05_flip-2_mt-off_MTS_seg-manual.json => sub-brnoUhb05_flip-2_mt-off_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-brnoUhb05/anat/{sub-brnoUhb05_flip-2_mt-off_MTS_seg-manual.nii.gz => sub-brnoUhb05_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-brnoUhb05/anat/{sub-brnoUhb05_T1w_labels-disc-manual.json => sub-brnoUhb05_space-other_T1w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-brnoUhb05/anat/{sub-brnoUhb05_T1w_labels-disc-manual.nii.gz => sub-brnoUhb05_space-other_T1w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-brnoUhb05/anat/{sub-brnoUhb05_T1w_seg-manual.json => sub-brnoUhb05_space-other_T1w_seg-manual.json} (100%) rename derivatives/labels/sub-brnoUhb05/anat/{sub-brnoUhb05_T1w_seg-manual.nii.gz => sub-brnoUhb05_space-other_T1w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-brnoUhb05/anat/{sub-brnoUhb05_T2star_seg-manual.json => sub-brnoUhb05_space-other_T2star_seg-manual.json} (100%) rename derivatives/labels/sub-brnoUhb05/anat/{sub-brnoUhb05_T2star_seg-manual.nii.gz => sub-brnoUhb05_space-other_T2star_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-brnoUhb05/anat/{sub-brnoUhb05_T2w_labels-disc-manual.json => sub-brnoUhb05_space-other_T2w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-brnoUhb05/anat/{sub-brnoUhb05_T2w_labels-disc-manual.nii.gz => sub-brnoUhb05_space-other_T2w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-brnoUhb05/anat/{sub-brnoUhb05_T2w_seg-manual.json => sub-brnoUhb05_space-other_T2w_seg-manual.json} (100%) rename derivatives/labels/sub-brnoUhb05/anat/{sub-brnoUhb05_T2w_seg-manual.nii.gz => sub-brnoUhb05_space-other_T2w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-brnoUhb06/anat/{sub-brnoUhb06_flip-1_mt-on_MTS_seg-manual.json => sub-brnoUhb06_flip-1_mt-on_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-brnoUhb06/anat/{sub-brnoUhb06_flip-1_mt-on_MTS_seg-manual.nii.gz => sub-brnoUhb06_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-brnoUhb06/anat/{sub-brnoUhb06_flip-2_mt-off_MTS_seg-manual.json => sub-brnoUhb06_flip-2_mt-off_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-brnoUhb06/anat/{sub-brnoUhb06_flip-2_mt-off_MTS_seg-manual.nii.gz => sub-brnoUhb06_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-brnoUhb06/anat/{sub-brnoUhb06_T1w_labels-disc-manual.json => sub-brnoUhb06_space-other_T1w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-brnoUhb06/anat/{sub-brnoUhb06_T1w_labels-disc-manual.nii.gz => sub-brnoUhb06_space-other_T1w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-brnoUhb06/anat/{sub-brnoUhb06_T1w_seg-manual.json => sub-brnoUhb06_space-other_T1w_seg-manual.json} (100%) rename derivatives/labels/sub-brnoUhb06/anat/{sub-brnoUhb06_T1w_seg-manual.nii.gz => sub-brnoUhb06_space-other_T1w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-brnoUhb06/anat/{sub-brnoUhb06_T2star_seg-manual.json => sub-brnoUhb06_space-other_T2star_seg-manual.json} (100%) rename derivatives/labels/sub-brnoUhb06/anat/{sub-brnoUhb06_T2star_seg-manual.nii.gz => sub-brnoUhb06_space-other_T2star_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-brnoUhb06/anat/{sub-brnoUhb06_T2w_labels-disc-manual.json => sub-brnoUhb06_space-other_T2w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-brnoUhb06/anat/{sub-brnoUhb06_T2w_labels-disc-manual.nii.gz => sub-brnoUhb06_space-other_T2w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-brnoUhb06/anat/{sub-brnoUhb06_T2w_seg-manual.json => sub-brnoUhb06_space-other_T2w_seg-manual.json} (100%) rename derivatives/labels/sub-brnoUhb06/anat/{sub-brnoUhb06_T2w_seg-manual.nii.gz => sub-brnoUhb06_space-other_T2w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-brnoUhb07/anat/{sub-brnoUhb07_flip-1_mt-on_MTS_seg-manual.json => sub-brnoUhb07_flip-1_mt-on_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-brnoUhb07/anat/{sub-brnoUhb07_flip-1_mt-on_MTS_seg-manual.nii.gz => sub-brnoUhb07_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-brnoUhb07/anat/{sub-brnoUhb07_flip-2_mt-off_MTS_seg-manual.json => sub-brnoUhb07_flip-2_mt-off_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-brnoUhb07/anat/{sub-brnoUhb07_flip-2_mt-off_MTS_seg-manual.nii.gz => sub-brnoUhb07_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-brnoUhb07/anat/{sub-brnoUhb07_T1w_labels-disc-manual.json => sub-brnoUhb07_space-other_T1w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-brnoUhb07/anat/{sub-brnoUhb07_T1w_labels-disc-manual.nii.gz => sub-brnoUhb07_space-other_T1w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-brnoUhb07/anat/{sub-brnoUhb07_T1w_seg-manual.json => sub-brnoUhb07_space-other_T1w_seg-manual.json} (100%) rename derivatives/labels/sub-brnoUhb07/anat/{sub-brnoUhb07_T1w_seg-manual.nii.gz => sub-brnoUhb07_space-other_T1w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-brnoUhb07/anat/{sub-brnoUhb07_T2star_seg-manual.json => sub-brnoUhb07_space-other_T2star_seg-manual.json} (100%) rename derivatives/labels/sub-brnoUhb07/anat/{sub-brnoUhb07_T2star_seg-manual.nii.gz => sub-brnoUhb07_space-other_T2star_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-brnoUhb07/anat/{sub-brnoUhb07_T2w_labels-disc-manual.json => sub-brnoUhb07_space-other_T2w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-brnoUhb07/anat/{sub-brnoUhb07_T2w_labels-disc-manual.nii.gz => sub-brnoUhb07_space-other_T2w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-brnoUhb07/anat/{sub-brnoUhb07_T2w_seg-manual.json => sub-brnoUhb07_space-other_T2w_seg-manual.json} (100%) rename derivatives/labels/sub-brnoUhb07/anat/{sub-brnoUhb07_T2w_seg-manual.nii.gz => sub-brnoUhb07_space-other_T2w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-brnoUhb08/anat/{sub-brnoUhb08_flip-1_mt-on_MTS_seg-manual.json => sub-brnoUhb08_flip-1_mt-on_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-brnoUhb08/anat/{sub-brnoUhb08_flip-1_mt-on_MTS_seg-manual.nii.gz => sub-brnoUhb08_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-brnoUhb08/anat/{sub-brnoUhb08_T2star_seg-manual.json => sub-brnoUhb08_flip-2_mt-off_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-brnoUhb08/anat/{sub-brnoUhb08_flip-2_mt-off_MTS_seg-manual.nii.gz => sub-brnoUhb08_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-brnoUhb08/anat/{sub-brnoUhb08_T1w_RPI_r_labels-manual.json => sub-brnoUhb08_space-other_T1w_RPI_r_labels-manual.json} (100%) rename derivatives/labels/sub-brnoUhb08/anat/{sub-brnoUhb08_T1w_RPI_r_labels-manual.nii.gz => sub-brnoUhb08_space-other_T1w_RPI_r_labels-manual.nii.gz} (100%) rename derivatives/labels/sub-brnoUhb08/anat/{sub-brnoUhb08_T1w_labels-disc-manual.json => sub-brnoUhb08_space-other_T1w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-brnoUhb08/anat/{sub-brnoUhb08_T1w_labels-disc-manual.nii.gz => sub-brnoUhb08_space-other_T1w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-brnoUhb08/anat/{sub-brnoUhb08_T1w_seg-manual.json => sub-brnoUhb08_space-other_T1w_seg-manual.json} (100%) rename derivatives/labels/sub-brnoUhb08/anat/{sub-brnoUhb08_T1w_seg-manual.nii.gz => sub-brnoUhb08_space-other_T1w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-brnoUhb08/anat/{sub-brnoUhb08_T2w_seg-manual.json => sub-brnoUhb08_space-other_T2star_seg-manual.json} (100%) rename derivatives/labels/sub-brnoUhb08/anat/{sub-brnoUhb08_T2star_seg-manual.nii.gz => sub-brnoUhb08_space-other_T2star_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-brnoUhb08/anat/{sub-brnoUhb08_T2w_labels-disc-manual.json => sub-brnoUhb08_space-other_T2w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-brnoUhb08/anat/{sub-brnoUhb08_T2w_labels-disc-manual.nii.gz => sub-brnoUhb08_space-other_T2w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-brnoUhb08/anat/{sub-brnoUhb08_flip-2_mt-off_MTS_seg-manual.json => sub-brnoUhb08_space-other_T2w_seg-manual.json} (100%) rename derivatives/labels/sub-brnoUhb08/anat/{sub-brnoUhb08_T2w_seg-manual.nii.gz => sub-brnoUhb08_space-other_T2w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-cardiff01/anat/{sub-cardiff01_T2star_seg-manual.json => sub-cardiff01_flip-1_mt-on_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-cardiff01/anat/{sub-cardiff01_flip-1_mt-on_MTS_seg-manual.nii.gz => sub-cardiff01_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-cardiff01/anat/{sub-cardiff01_flip-2_mt-off_MTS_seg-manual.json => sub-cardiff01_flip-2_mt-off_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-cardiff01/anat/{sub-cardiff01_flip-2_mt-off_MTS_seg-manual.nii.gz => sub-cardiff01_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-cardiff01/anat/{sub-cardiff01_T1w_labels-disc-manual.json => sub-cardiff01_space-other_T1w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-cardiff01/anat/{sub-cardiff01_T1w_labels-disc-manual.nii.gz => sub-cardiff01_space-other_T1w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-cardiff01/anat/{sub-cardiff01_T1w_seg-manual.json => sub-cardiff01_space-other_T1w_seg-manual.json} (100%) rename derivatives/labels/sub-cardiff01/anat/{sub-cardiff01_T1w_seg-manual.nii.gz => sub-cardiff01_space-other_T1w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-cardiff01/anat/{sub-cardiff01_flip-1_mt-on_MTS_seg-manual.json => sub-cardiff01_space-other_T2star_seg-manual.json} (100%) rename derivatives/labels/sub-cardiff01/anat/{sub-cardiff01_T2star_seg-manual.nii.gz => sub-cardiff01_space-other_T2star_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-cardiff01/anat/{sub-cardiff01_T2w_labels-disc-manual.json => sub-cardiff01_space-other_T2w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-cardiff01/anat/{sub-cardiff01_T2w_labels-disc-manual.nii.gz => sub-cardiff01_space-other_T2w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-cardiff01/anat/{sub-cardiff01_T2w_seg-manual.json => sub-cardiff01_space-other_T2w_seg-manual.json} (100%) rename derivatives/labels/sub-cardiff01/anat/{sub-cardiff01_T2w_seg-manual.nii.gz => sub-cardiff01_space-other_T2w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-cardiff02/anat/{sub-cardiff02_T2star_seg-manual.json => sub-cardiff02_flip-1_mt-on_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-cardiff02/anat/{sub-cardiff02_flip-1_mt-on_MTS_seg-manual.nii.gz => sub-cardiff02_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-cardiff02/anat/{sub-cardiff02_flip-2_mt-off_MTS_seg-manual.json => sub-cardiff02_flip-2_mt-off_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-cardiff02/anat/{sub-cardiff02_flip-2_mt-off_MTS_seg-manual.nii.gz => sub-cardiff02_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-cardiff02/anat/{sub-cardiff02_T1w_labels-disc-manual.json => sub-cardiff02_space-other_T1w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-cardiff02/anat/{sub-cardiff02_T1w_labels-disc-manual.nii.gz => sub-cardiff02_space-other_T1w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-cardiff02/anat/{sub-cardiff02_T1w_seg-manual.json => sub-cardiff02_space-other_T1w_seg-manual.json} (100%) rename derivatives/labels/sub-cardiff02/anat/{sub-cardiff02_T1w_seg-manual.nii.gz => sub-cardiff02_space-other_T1w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-cardiff02/anat/{sub-cardiff02_flip-1_mt-on_MTS_seg-manual.json => sub-cardiff02_space-other_T2star_seg-manual.json} (100%) rename derivatives/labels/sub-cardiff02/anat/{sub-cardiff02_T2star_seg-manual.nii.gz => sub-cardiff02_space-other_T2star_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-cardiff02/anat/{sub-cardiff02_T2w_labels-disc-manual.json => sub-cardiff02_space-other_T2w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-cardiff02/anat/{sub-cardiff02_T2w_labels-disc-manual.nii.gz => sub-cardiff02_space-other_T2w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-cardiff02/anat/{sub-cardiff02_T2w_seg-manual.json => sub-cardiff02_space-other_T2w_seg-manual.json} (100%) rename derivatives/labels/sub-cardiff02/anat/{sub-cardiff02_T2w_seg-manual.nii.gz => sub-cardiff02_space-other_T2w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-cardiff03/anat/{sub-cardiff03_T2star_seg-manual.json => sub-cardiff03_flip-1_mt-on_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-cardiff03/anat/{sub-cardiff03_flip-1_mt-on_MTS_seg-manual.nii.gz => sub-cardiff03_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-cardiff03/anat/{sub-cardiff03_flip-2_mt-off_MTS_seg-manual.json => sub-cardiff03_flip-2_mt-off_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-cardiff03/anat/{sub-cardiff03_flip-2_mt-off_MTS_seg-manual.nii.gz => sub-cardiff03_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-cardiff03/anat/{sub-cardiff03_T1w_labels-disc-manual.json => sub-cardiff03_space-other_T1w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-cardiff03/anat/{sub-cardiff03_T1w_labels-disc-manual.nii.gz => sub-cardiff03_space-other_T1w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-cardiff03/anat/{sub-cardiff03_T1w_seg-manual.json => sub-cardiff03_space-other_T1w_seg-manual.json} (100%) rename derivatives/labels/sub-cardiff03/anat/{sub-cardiff03_T1w_seg-manual.nii.gz => sub-cardiff03_space-other_T1w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-cardiff03/anat/{sub-cardiff03_T2w_seg-manual.json => sub-cardiff03_space-other_T2star_seg-manual.json} (100%) rename derivatives/labels/sub-cardiff03/anat/{sub-cardiff03_T2star_seg-manual.nii.gz => sub-cardiff03_space-other_T2star_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-cardiff03/anat/{sub-cardiff03_T2w_labels-disc-manual.json => sub-cardiff03_space-other_T2w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-cardiff03/anat/{sub-cardiff03_T2w_labels-disc-manual.nii.gz => sub-cardiff03_space-other_T2w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-cardiff03/anat/{sub-cardiff03_flip-1_mt-on_MTS_seg-manual.json => sub-cardiff03_space-other_T2w_seg-manual.json} (100%) rename derivatives/labels/sub-cardiff03/anat/{sub-cardiff03_T2w_seg-manual.nii.gz => sub-cardiff03_space-other_T2w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-cardiff04/anat/{sub-cardiff04_T2star_seg-manual.json => sub-cardiff04_flip-1_mt-on_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-cardiff04/anat/{sub-cardiff04_flip-1_mt-on_MTS_seg-manual.nii.gz => sub-cardiff04_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-cardiff04/anat/{sub-cardiff04_flip-1_mt-on_MTS_seg-manual.json => sub-cardiff04_flip-2_mt-off_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-cardiff04/anat/{sub-cardiff04_flip-2_mt-off_MTS_seg-manual.nii.gz => sub-cardiff04_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-cardiff04/anat/{sub-cardiff04_T1w_labels-disc-manual.json => sub-cardiff04_space-other_T1w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-cardiff04/anat/{sub-cardiff04_T1w_labels-disc-manual.nii.gz => sub-cardiff04_space-other_T1w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-cardiff04/anat/{sub-cardiff04_T1w_seg-manual.json => sub-cardiff04_space-other_T1w_seg-manual.json} (100%) rename derivatives/labels/sub-cardiff04/anat/{sub-cardiff04_T1w_seg-manual.nii.gz => sub-cardiff04_space-other_T1w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-cardiff04/anat/{sub-cardiff04_flip-2_mt-off_MTS_seg-manual.json => sub-cardiff04_space-other_T2star_seg-manual.json} (100%) rename derivatives/labels/sub-cardiff04/anat/{sub-cardiff04_T2star_seg-manual.nii.gz => sub-cardiff04_space-other_T2star_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-cardiff04/anat/{sub-cardiff04_T2w_labels-disc-manual.json => sub-cardiff04_space-other_T2w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-cardiff04/anat/{sub-cardiff04_T2w_labels-disc-manual.nii.gz => sub-cardiff04_space-other_T2w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-cardiff04/anat/{sub-cardiff04_T2w_seg-manual.json => sub-cardiff04_space-other_T2w_seg-manual.json} (100%) rename derivatives/labels/sub-cardiff04/anat/{sub-cardiff04_T2w_seg-manual.nii.gz => sub-cardiff04_space-other_T2w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-cardiff05/anat/{sub-cardiff05_T2star_seg-manual.json => sub-cardiff05_flip-1_mt-on_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-cardiff05/anat/{sub-cardiff05_flip-1_mt-on_MTS_seg-manual.nii.gz => sub-cardiff05_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-cardiff05/anat/{sub-cardiff05_flip-2_mt-off_MTS_seg-manual.json => sub-cardiff05_flip-2_mt-off_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-cardiff05/anat/{sub-cardiff05_flip-2_mt-off_MTS_seg-manual.nii.gz => sub-cardiff05_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-cardiff05/anat/{sub-cardiff05_T1w_RPI_r_labels-manual.nii.gz => sub-cardiff05_space-other_T1w_RPI_r_labels-manual.nii.gz} (100%) rename derivatives/labels/sub-cardiff05/anat/{sub-cardiff05_T1w_labels-disc-manual.json => sub-cardiff05_space-other_T1w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-cardiff05/anat/{sub-cardiff05_T1w_labels-disc-manual.nii.gz => sub-cardiff05_space-other_T1w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-cardiff05/anat/{sub-cardiff05_T1w_seg-manual.json => sub-cardiff05_space-other_T1w_seg-manual.json} (100%) rename derivatives/labels/sub-cardiff05/anat/{sub-cardiff05_T1w_seg-manual.nii.gz => sub-cardiff05_space-other_T1w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-cardiff05/anat/{sub-cardiff05_flip-1_mt-on_MTS_seg-manual.json => sub-cardiff05_space-other_T2star_seg-manual.json} (100%) rename derivatives/labels/sub-cardiff05/anat/{sub-cardiff05_T2star_seg-manual.nii.gz => sub-cardiff05_space-other_T2star_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-cardiff05/anat/{sub-cardiff05_T2w_labels-disc-manual.json => sub-cardiff05_space-other_T2w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-cardiff05/anat/{sub-cardiff05_T2w_labels-disc-manual.nii.gz => sub-cardiff05_space-other_T2w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-cardiff05/anat/{sub-cardiff05_T2w_seg-manual.json => sub-cardiff05_space-other_T2w_seg-manual.json} (100%) rename derivatives/labels/sub-cardiff05/anat/{sub-cardiff05_T2w_seg-manual.nii.gz => sub-cardiff05_space-other_T2w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-cardiff06/anat/{sub-cardiff06_T2star_seg-manual.json => sub-cardiff06_flip-1_mt-on_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-cardiff06/anat/{sub-cardiff06_flip-1_mt-on_MTS_seg-manual.nii.gz => sub-cardiff06_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-cardiff06/anat/{sub-cardiff06_flip-1_mt-on_MTS_seg-manual.json => sub-cardiff06_flip-2_mt-off_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-cardiff06/anat/{sub-cardiff06_flip-2_mt-off_MTS_seg-manual.nii.gz => sub-cardiff06_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-cardiff06/anat/{sub-cardiff06_T1w_labels-disc-manual.json => sub-cardiff06_space-other_T1w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-cardiff06/anat/{sub-cardiff06_T1w_labels-disc-manual.nii.gz => sub-cardiff06_space-other_T1w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-cardiff06/anat/{sub-cardiff06_T1w_seg-manual.json => sub-cardiff06_space-other_T1w_seg-manual.json} (100%) rename derivatives/labels/sub-cardiff06/anat/{sub-cardiff06_T1w_seg-manual.nii.gz => sub-cardiff06_space-other_T1w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-cardiff06/anat/{sub-cardiff06_flip-2_mt-off_MTS_seg-manual.json => sub-cardiff06_space-other_T2star_seg-manual.json} (100%) rename derivatives/labels/sub-cardiff06/anat/{sub-cardiff06_T2star_seg-manual.nii.gz => sub-cardiff06_space-other_T2star_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-cardiff06/anat/{sub-cardiff06_T2w_labels-disc-manual.json => sub-cardiff06_space-other_T2w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-cardiff06/anat/{sub-cardiff06_T2w_labels-disc-manual.nii.gz => sub-cardiff06_space-other_T2w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-cardiff06/anat/{sub-cardiff06_T2w_seg-manual.json => sub-cardiff06_space-other_T2w_seg-manual.json} (100%) rename derivatives/labels/sub-cardiff06/anat/{sub-cardiff06_T2w_seg-manual.nii.gz => sub-cardiff06_space-other_T2w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-cmrra01/anat/{sub-cmrra01_T2star_seg-manual.json => sub-cmrra01_flip-1_mt-on_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-cmrra01/anat/{sub-cmrra01_flip-1_mt-on_MTS_seg-manual.nii.gz => sub-cmrra01_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-cmrra01/anat/{sub-cmrra01_flip-2_mt-off_MTS_seg-manual.json => sub-cmrra01_flip-2_mt-off_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-cmrra01/anat/{sub-cmrra01_flip-2_mt-off_MTS_seg-manual.nii.gz => sub-cmrra01_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-cmrra01/anat/{sub-cmrra01_T1w_labels-disc-manual.json => sub-cmrra01_space-other_T1w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-cmrra01/anat/{sub-cmrra01_T1w_labels-disc-manual.nii.gz => sub-cmrra01_space-other_T1w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-cmrra01/anat/{sub-cmrra01_T1w_seg-manual.json => sub-cmrra01_space-other_T1w_seg-manual.json} (100%) rename derivatives/labels/sub-cmrra01/anat/{sub-cmrra01_T1w_seg-manual.nii.gz => sub-cmrra01_space-other_T1w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-cmrra01/anat/{sub-cmrra01_flip-1_mt-on_MTS_seg-manual.json => sub-cmrra01_space-other_T2star_seg-manual.json} (100%) rename derivatives/labels/sub-cmrra01/anat/{sub-cmrra01_T2star_seg-manual.nii.gz => sub-cmrra01_space-other_T2star_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-cmrra01/anat/{sub-cmrra01_T2w_labels-disc-manual.json => sub-cmrra01_space-other_T2w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-cmrra01/anat/{sub-cmrra01_T2w_labels-disc-manual.nii.gz => sub-cmrra01_space-other_T2w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-cmrra01/anat/{sub-cmrra01_T2w_seg-manual.json => sub-cmrra01_space-other_T2w_seg-manual.json} (100%) rename derivatives/labels/sub-cmrra01/anat/{sub-cmrra01_T2w_seg-manual.nii.gz => sub-cmrra01_space-other_T2w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-cmrra02/anat/{sub-cmrra02_flip-1_mt-on_MTS_seg-manual.json => sub-cmrra02_flip-1_mt-on_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-cmrra02/anat/{sub-cmrra02_flip-1_mt-on_MTS_seg-manual.nii.gz => sub-cmrra02_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-cmrra02/anat/{sub-cmrra02_T2star_seg-manual.json => sub-cmrra02_flip-2_mt-off_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-cmrra02/anat/{sub-cmrra02_flip-2_mt-off_MTS_seg-manual.nii.gz => sub-cmrra02_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-cmrra02/anat/{sub-cmrra02_T1w_labels-disc-manual.json => sub-cmrra02_space-other_T1w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-cmrra02/anat/{sub-cmrra02_T1w_labels-disc-manual.nii.gz => sub-cmrra02_space-other_T1w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-cmrra02/anat/{sub-cmrra02_T1w_seg-manual.json => sub-cmrra02_space-other_T1w_seg-manual.json} (100%) rename derivatives/labels/sub-cmrra02/anat/{sub-cmrra02_T1w_seg-manual.nii.gz => sub-cmrra02_space-other_T1w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-cmrra02/anat/{sub-cmrra02_flip-2_mt-off_MTS_seg-manual.json => sub-cmrra02_space-other_T2star_seg-manual.json} (100%) rename derivatives/labels/sub-cmrra02/anat/{sub-cmrra02_T2star_seg-manual.nii.gz => sub-cmrra02_space-other_T2star_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-cmrra02/anat/{sub-cmrra02_T2w_labels-disc-manual.json => sub-cmrra02_space-other_T2w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-cmrra02/anat/{sub-cmrra02_T2w_labels-disc-manual.nii.gz => sub-cmrra02_space-other_T2w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-cmrra02/anat/{sub-cmrra02_T2w_seg-manual.json => sub-cmrra02_space-other_T2w_seg-manual.json} (100%) rename derivatives/labels/sub-cmrra02/anat/{sub-cmrra02_T2w_seg-manual.nii.gz => sub-cmrra02_space-other_T2w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-cmrra03/anat/{sub-cmrra03_T2star_seg-manual.json => sub-cmrra03_flip-1_mt-on_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-cmrra03/anat/{sub-cmrra03_flip-1_mt-on_MTS_seg-manual.nii.gz => sub-cmrra03_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-cmrra03/anat/{sub-cmrra03_flip-2_mt-off_MTS_seg-manual.json => sub-cmrra03_flip-2_mt-off_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-cmrra03/anat/{sub-cmrra03_flip-2_mt-off_MTS_seg-manual.nii.gz => sub-cmrra03_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-cmrra03/anat/{sub-cmrra03_T1w_labels-disc-manual.json => sub-cmrra03_space-other_T1w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-cmrra03/anat/{sub-cmrra03_T1w_labels-disc-manual.nii.gz => sub-cmrra03_space-other_T1w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-cmrra03/anat/{sub-cmrra03_T1w_seg-manual.json => sub-cmrra03_space-other_T1w_seg-manual.json} (100%) rename derivatives/labels/sub-cmrra03/anat/{sub-cmrra03_T1w_seg-manual.nii.gz => sub-cmrra03_space-other_T1w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-cmrra03/anat/{sub-cmrra03_flip-1_mt-on_MTS_seg-manual.json => sub-cmrra03_space-other_T2star_seg-manual.json} (100%) rename derivatives/labels/sub-cmrra03/anat/{sub-cmrra03_T2star_seg-manual.nii.gz => sub-cmrra03_space-other_T2star_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-cmrra03/anat/{sub-cmrra03_T2w_labels-disc-manual.json => sub-cmrra03_space-other_T2w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-cmrra03/anat/{sub-cmrra03_T2w_labels-disc-manual.nii.gz => sub-cmrra03_space-other_T2w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-cmrra03/anat/{sub-cmrra03_T2w_seg-manual.json => sub-cmrra03_space-other_T2w_seg-manual.json} (100%) rename derivatives/labels/sub-cmrra03/anat/{sub-cmrra03_T2w_seg-manual.nii.gz => sub-cmrra03_space-other_T2w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-cmrra04/anat/{sub-cmrra04_flip-1_mt-on_MTS_seg-manual.json => sub-cmrra04_flip-1_mt-on_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-cmrra04/anat/{sub-cmrra04_flip-1_mt-on_MTS_seg-manual.nii.gz => sub-cmrra04_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-cmrra04/anat/{sub-cmrra04_T2star_seg-manual.json => sub-cmrra04_flip-2_mt-off_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-cmrra04/anat/{sub-cmrra04_flip-2_mt-off_MTS_seg-manual.nii.gz => sub-cmrra04_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-cmrra04/anat/{sub-cmrra04_T1w_labels-disc-manual.json => sub-cmrra04_space-other_T1w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-cmrra04/anat/{sub-cmrra04_T1w_labels-disc-manual.nii.gz => sub-cmrra04_space-other_T1w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-cmrra04/anat/{sub-cmrra04_T1w_seg-manual.json => sub-cmrra04_space-other_T1w_seg-manual.json} (100%) rename derivatives/labels/sub-cmrra04/anat/{sub-cmrra04_T1w_seg-manual.nii.gz => sub-cmrra04_space-other_T1w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-cmrra04/anat/{sub-cmrra04_flip-2_mt-off_MTS_seg-manual.json => sub-cmrra04_space-other_T2star_seg-manual.json} (100%) rename derivatives/labels/sub-cmrra04/anat/{sub-cmrra04_T2star_seg-manual.nii.gz => sub-cmrra04_space-other_T2star_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-cmrra04/anat/{sub-cmrra04_T2w_labels-disc-manual.json => sub-cmrra04_space-other_T2w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-cmrra04/anat/{sub-cmrra04_T2w_labels-disc-manual.nii.gz => sub-cmrra04_space-other_T2w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-cmrra04/anat/{sub-cmrra04_T2w_seg-manual.json => sub-cmrra04_space-other_T2w_seg-manual.json} (100%) rename derivatives/labels/sub-cmrra04/anat/{sub-cmrra04_T2w_seg-manual.nii.gz => sub-cmrra04_space-other_T2w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-cmrra05/anat/{sub-cmrra05_flip-1_mt-on_MTS_seg-manual.json => sub-cmrra05_flip-1_mt-on_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-cmrra05/anat/{sub-cmrra05_flip-1_mt-on_MTS_seg-manual.nii.gz => sub-cmrra05_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-cmrra05/anat/{sub-cmrra05_flip-2_mt-off_MTS_seg-manual.json => sub-cmrra05_flip-2_mt-off_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-cmrra05/anat/{sub-cmrra05_flip-2_mt-off_MTS_seg-manual.nii.gz => sub-cmrra05_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-cmrra05/anat/{sub-cmrra05_T1w_RPI_r_labels-manual.nii.gz => sub-cmrra05_space-other_T1w_RPI_r_labels-manual.nii.gz} (100%) rename derivatives/labels/sub-cmrra05/anat/{sub-cmrra05_T1w_labels-disc-manual.json => sub-cmrra05_space-other_T1w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-cmrra05/anat/{sub-cmrra05_T1w_labels-disc-manual.nii.gz => sub-cmrra05_space-other_T1w_labels-disc-manual.nii.gz} (100%) 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derivatives/labels/sub-cmrra05/anat/{sub-cmrra05_T2w_seg-manual.nii.gz => sub-cmrra05_space-other_T2w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-cmrra06/anat/{sub-cmrra06_T2star_seg-manual.json => sub-cmrra06_flip-1_mt-on_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-cmrra06/anat/{sub-cmrra06_flip-1_mt-on_MTS_seg-manual.nii.gz => sub-cmrra06_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-cmrra06/anat/{sub-cmrra06_flip-2_mt-off_MTS_seg-manual.json => sub-cmrra06_flip-2_mt-off_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-cmrra06/anat/{sub-cmrra06_flip-2_mt-off_MTS_seg-manual.nii.gz => sub-cmrra06_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-cmrra06/anat/{sub-cmrra06_T1w_labels-disc-manual.json => sub-cmrra06_space-other_T1w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-cmrra06/anat/{sub-cmrra06_T1w_labels-disc-manual.nii.gz => sub-cmrra06_space-other_T1w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-cmrra06/anat/{sub-cmrra06_T1w_seg-manual.json => sub-cmrra06_space-other_T1w_seg-manual.json} (100%) rename derivatives/labels/sub-cmrra06/anat/{sub-cmrra06_T1w_seg-manual.nii.gz => sub-cmrra06_space-other_T1w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-cmrra06/anat/{sub-cmrra06_T2w_seg-manual.json => sub-cmrra06_space-other_T2star_seg-manual.json} (100%) rename derivatives/labels/sub-cmrra06/anat/{sub-cmrra06_T2star_seg-manual.nii.gz => sub-cmrra06_space-other_T2star_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-cmrra06/anat/{sub-cmrra06_T2w_labels-disc-manual.json => sub-cmrra06_space-other_T2w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-cmrra06/anat/{sub-cmrra06_T2w_labels-disc-manual.nii.gz => sub-cmrra06_space-other_T2w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-cmrra06/anat/{sub-cmrra06_flip-1_mt-on_MTS_seg-manual.json => sub-cmrra06_space-other_T2w_seg-manual.json} (100%) rename derivatives/labels/sub-cmrra06/anat/{sub-cmrra06_T2w_seg-manual.nii.gz => sub-cmrra06_space-other_T2w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-cmrrb01/anat/{sub-cmrrb01_flip-1_mt-on_MTS_seg-manual.json => sub-cmrrb01_flip-1_mt-on_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-cmrrb01/anat/{sub-cmrrb01_flip-1_mt-on_MTS_seg-manual.nii.gz => sub-cmrrb01_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-cmrrb01/anat/{sub-cmrrb01_flip-2_mt-off_MTS_seg-manual.json => sub-cmrrb01_flip-2_mt-off_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-cmrrb01/anat/{sub-cmrrb01_flip-2_mt-off_MTS_seg-manual.nii.gz => sub-cmrrb01_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-cmrrb01/anat/{sub-cmrrb01_T1w_labels-disc-manual.json => sub-cmrrb01_space-other_T1w_labels-disc-manual.json} (100%) rename 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derivatives/labels/sub-cmrrb01/anat/{sub-cmrrb01_T2w_seg-manual.json => sub-cmrrb01_space-other_T2w_seg-manual.json} (100%) rename derivatives/labels/sub-cmrrb01/anat/{sub-cmrrb01_T2w_seg-manual.nii.gz => sub-cmrrb01_space-other_T2w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-cmrrb02/anat/{sub-cmrrb02_T2star_seg-manual.json => sub-cmrrb02_flip-1_mt-on_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-cmrrb02/anat/{sub-cmrrb02_flip-1_mt-on_MTS_seg-manual.nii.gz => sub-cmrrb02_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-cmrrb02/anat/{sub-cmrrb02_flip-2_mt-off_MTS_seg-manual.json => sub-cmrrb02_flip-2_mt-off_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-cmrrb02/anat/{sub-cmrrb02_flip-2_mt-off_MTS_seg-manual.nii.gz => sub-cmrrb02_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-cmrrb02/anat/{sub-cmrrb02_T1w_labels-disc-manual.json => sub-cmrrb02_space-other_T1w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-cmrrb02/anat/{sub-cmrrb02_T1w_labels-disc-manual.nii.gz => sub-cmrrb02_space-other_T1w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-cmrrb02/anat/{sub-cmrrb02_T1w_seg-manual.json => sub-cmrrb02_space-other_T1w_seg-manual.json} (100%) rename derivatives/labels/sub-cmrrb02/anat/{sub-cmrrb02_T1w_seg-manual.nii.gz => sub-cmrrb02_space-other_T1w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-cmrrb02/anat/{sub-cmrrb02_flip-1_mt-on_MTS_seg-manual.json => sub-cmrrb02_space-other_T2star_seg-manual.json} (100%) rename derivatives/labels/sub-cmrrb02/anat/{sub-cmrrb02_T2star_seg-manual.nii.gz => sub-cmrrb02_space-other_T2star_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-cmrrb02/anat/{sub-cmrrb02_T2w_labels-disc-manual.json => sub-cmrrb02_space-other_T2w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-cmrrb02/anat/{sub-cmrrb02_T2w_labels-disc-manual.nii.gz => sub-cmrrb02_space-other_T2w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-cmrrb02/anat/{sub-cmrrb02_T2w_seg-manual.json => sub-cmrrb02_space-other_T2w_seg-manual.json} (100%) rename derivatives/labels/sub-cmrrb02/anat/{sub-cmrrb02_T2w_seg-manual.nii.gz => sub-cmrrb02_space-other_T2w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-cmrrb03/anat/{sub-cmrrb03_T2star_seg-manual.json => sub-cmrrb03_flip-1_mt-on_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-cmrrb03/anat/{sub-cmrrb03_flip-1_mt-on_MTS_seg-manual.nii.gz => sub-cmrrb03_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-cmrrb03/anat/{sub-cmrrb03_flip-2_mt-off_MTS_seg-manual.json => sub-cmrrb03_flip-2_mt-off_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-cmrrb03/anat/{sub-cmrrb03_flip-2_mt-off_MTS_seg-manual.nii.gz => sub-cmrrb03_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} (100%) rename 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(100%) rename derivatives/labels/sub-cmrrb04/anat/{sub-cmrrb04_flip-2_mt-off_MTS_seg-manual.json => sub-cmrrb04_flip-2_mt-off_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-cmrrb04/anat/{sub-cmrrb04_flip-2_mt-off_MTS_seg-manual.nii.gz => sub-cmrrb04_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-cmrrb04/anat/{sub-cmrrb04_T1w_labels-disc-manual.json => sub-cmrrb04_space-other_T1w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-cmrrb04/anat/{sub-cmrrb04_T1w_labels-disc-manual.nii.gz => sub-cmrrb04_space-other_T1w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-cmrrb04/anat/{sub-cmrrb04_T1w_seg-manual.json => sub-cmrrb04_space-other_T1w_seg-manual.json} (100%) rename derivatives/labels/sub-cmrrb04/anat/{sub-cmrrb04_T1w_seg-manual.nii.gz => sub-cmrrb04_space-other_T1w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-cmrrb04/anat/{sub-cmrrb04_flip-1_mt-on_MTS_seg-manual.json => 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sub-cmrrb05_space-other_T1w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-cmrrb05/anat/{sub-cmrrb05_T2w_seg-manual.json => sub-cmrrb05_space-other_T2star_seg-manual.json} (100%) rename derivatives/labels/sub-cmrrb05/anat/{sub-cmrrb05_T2star_seg-manual.nii.gz => sub-cmrrb05_space-other_T2star_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-cmrrb05/anat/{sub-cmrrb05_T2w_labels-disc-manual.json => sub-cmrrb05_space-other_T2w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-cmrrb05/anat/{sub-cmrrb05_T2w_labels-disc-manual.nii.gz => sub-cmrrb05_space-other_T2w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-cmrrb05/anat/{sub-cmrrb05_flip-2_mt-off_MTS_seg-manual.json => sub-cmrrb05_space-other_T2w_seg-manual.json} (100%) rename derivatives/labels/sub-cmrrb05/anat/{sub-cmrrb05_T2w_seg-manual.nii.gz => sub-cmrrb05_space-other_T2w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-cmrrb06/anat/{sub-cmrrb06_flip-1_mt-on_MTS_seg-manual.json => sub-cmrrb06_flip-1_mt-on_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-cmrrb06/anat/{sub-cmrrb06_flip-1_mt-on_MTS_seg-manual.nii.gz => sub-cmrrb06_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-cmrrb06/anat/{sub-cmrrb06_flip-2_mt-off_MTS_seg-manual.json => sub-cmrrb06_flip-2_mt-off_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-cmrrb06/anat/{sub-cmrrb06_flip-2_mt-off_MTS_seg-manual.nii.gz => sub-cmrrb06_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-cmrrb06/anat/{sub-cmrrb06_T1w_labels-disc-manual.json => sub-cmrrb06_space-other_T1w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-cmrrb06/anat/{sub-cmrrb06_T1w_labels-disc-manual.nii.gz => sub-cmrrb06_space-other_T1w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-cmrrb06/anat/{sub-cmrrb06_T1w_seg-manual.json => sub-cmrrb06_space-other_T1w_seg-manual.json} (100%) rename derivatives/labels/sub-cmrrb06/anat/{sub-cmrrb06_T1w_seg-manual.nii.gz => sub-cmrrb06_space-other_T1w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-cmrrb06/anat/{sub-cmrrb06_T2star_seg-manual.json => sub-cmrrb06_space-other_T2star_seg-manual.json} (100%) rename derivatives/labels/sub-cmrrb06/anat/{sub-cmrrb06_T2star_seg-manual.nii.gz => sub-cmrrb06_space-other_T2star_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-cmrrb06/anat/{sub-cmrrb06_T2w_labels-disc-manual.json => sub-cmrrb06_space-other_T2w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-cmrrb06/anat/{sub-cmrrb06_T2w_labels-disc-manual.nii.gz => sub-cmrrb06_space-other_T2w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-cmrrb06/anat/{sub-cmrrb06_T2w_seg-manual.json => sub-cmrrb06_space-other_T2w_seg-manual.json} (100%) rename derivatives/labels/sub-cmrrb06/anat/{sub-cmrrb06_T2w_seg-manual.nii.gz => sub-cmrrb06_space-other_T2w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-cmrrb07/anat/{sub-cmrrb07_flip-1_mt-on_MTS_seg-manual.json => sub-cmrrb07_flip-1_mt-on_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-cmrrb07/anat/{sub-cmrrb07_flip-1_mt-on_MTS_seg-manual.nii.gz => sub-cmrrb07_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-cmrrb07/anat/{sub-cmrrb07_flip-2_mt-off_MTS_seg-manual.json => sub-cmrrb07_flip-2_mt-off_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-cmrrb07/anat/{sub-cmrrb07_flip-2_mt-off_MTS_seg-manual.nii.gz => sub-cmrrb07_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-cmrrb07/anat/{sub-cmrrb07_T1w_labels-disc-manual.json => sub-cmrrb07_space-other_T1w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-cmrrb07/anat/{sub-cmrrb07_T1w_labels-disc-manual.nii.gz => sub-cmrrb07_space-other_T1w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-cmrrb07/anat/{sub-cmrrb07_T1w_seg-manual.json => sub-cmrrb07_space-other_T1w_seg-manual.json} (100%) rename derivatives/labels/sub-cmrrb07/anat/{sub-cmrrb07_T1w_seg-manual.nii.gz => sub-cmrrb07_space-other_T1w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-cmrrb07/anat/{sub-cmrrb07_T2star_seg-manual.json => sub-cmrrb07_space-other_T2star_seg-manual.json} (100%) rename derivatives/labels/sub-cmrrb07/anat/{sub-cmrrb07_T2star_seg-manual.nii.gz => sub-cmrrb07_space-other_T2star_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-cmrrb07/anat/{sub-cmrrb07_T2w_labels-disc-manual.json => sub-cmrrb07_space-other_T2w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-cmrrb07/anat/{sub-cmrrb07_T2w_labels-disc-manual.nii.gz => sub-cmrrb07_space-other_T2w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-cmrrb07/anat/{sub-cmrrb07_T2w_seg-manual.json => sub-cmrrb07_space-other_T2w_seg-manual.json} (100%) rename derivatives/labels/sub-cmrrb07/anat/{sub-cmrrb07_T2w_seg-manual.nii.gz => sub-cmrrb07_space-other_T2w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-dresden01/anat/{sub-dresden01_flip-1_mt-on_MTS_seg-manual.json => sub-dresden01_flip-1_mt-on_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-dresden01/anat/{sub-dresden01_flip-1_mt-on_MTS_seg-manual.nii.gz => sub-dresden01_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-dresden01/anat/{sub-dresden01_flip-2_mt-off_MTS_seg-manual.json => sub-dresden01_flip-2_mt-off_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-dresden01/anat/{sub-dresden01_flip-2_mt-off_MTS_seg-manual.nii.gz => sub-dresden01_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-dresden01/anat/{sub-dresden01_T1w_labels-disc-manual.json => sub-dresden01_space-other_T1w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-dresden01/anat/{sub-dresden01_T1w_labels-disc-manual.nii.gz => sub-dresden01_space-other_T1w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-dresden01/anat/{sub-dresden01_T1w_seg-manual.json => sub-dresden01_space-other_T1w_seg-manual.json} (100%) rename derivatives/labels/sub-dresden01/anat/{sub-dresden01_T1w_seg-manual.nii.gz => sub-dresden01_space-other_T1w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-dresden01/anat/{sub-dresden01_T2star_seg-manual.json => sub-dresden01_space-other_T2star_seg-manual.json} (100%) rename derivatives/labels/sub-dresden01/anat/{sub-dresden01_T2star_seg-manual.nii.gz => sub-dresden01_space-other_T2star_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-dresden01/anat/{sub-dresden01_T2w_labels-disc-manual.json => sub-dresden01_space-other_T2w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-dresden01/anat/{sub-dresden01_T2w_labels-disc-manual.nii.gz => sub-dresden01_space-other_T2w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-dresden01/anat/{sub-dresden01_T2w_seg-manual.json => sub-dresden01_space-other_T2w_seg-manual.json} (100%) rename derivatives/labels/sub-dresden01/anat/{sub-dresden01_T2w_seg-manual.nii.gz => sub-dresden01_space-other_T2w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-dresden02/anat/{sub-dresden02_flip-1_mt-on_MTS_seg-manual.json => sub-dresden02_flip-1_mt-on_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-dresden02/anat/{sub-dresden02_flip-1_mt-on_MTS_seg-manual.nii.gz => sub-dresden02_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-dresden02/anat/{sub-dresden02_flip-2_mt-off_MTS_seg-manual.json => sub-dresden02_flip-2_mt-off_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-dresden02/anat/{sub-dresden02_flip-2_mt-off_MTS_seg-manual.nii.gz => sub-dresden02_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-dresden02/anat/{sub-dresden02_T1w_labels-disc-manual.json => sub-dresden02_space-other_T1w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-dresden02/anat/{sub-dresden02_T1w_labels-disc-manual.nii.gz => sub-dresden02_space-other_T1w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-dresden02/anat/{sub-dresden02_T1w_seg-manual.json => sub-dresden02_space-other_T1w_seg-manual.json} (100%) rename derivatives/labels/sub-dresden02/anat/{sub-dresden02_T1w_seg-manual.nii.gz => sub-dresden02_space-other_T1w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-dresden02/anat/{sub-dresden02_T2star_seg-manual.json => sub-dresden02_space-other_T2star_seg-manual.json} (100%) rename derivatives/labels/sub-dresden02/anat/{sub-dresden02_T2star_seg-manual.nii.gz => sub-dresden02_space-other_T2star_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-dresden02/anat/{sub-dresden02_T2w_labels-disc-manual.json => sub-dresden02_space-other_T2w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-dresden02/anat/{sub-dresden02_T2w_labels-disc-manual.nii.gz => sub-dresden02_space-other_T2w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-dresden02/anat/{sub-dresden02_T2w_seg-manual.json => sub-dresden02_space-other_T2w_seg-manual.json} (100%) rename derivatives/labels/sub-dresden02/anat/{sub-dresden02_T2w_seg-manual.nii.gz => sub-dresden02_space-other_T2w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-fslAchieva01/anat/{sub-fslAchieva01_flip-1_mt-on_MTS_seg-manual.json => sub-fslAchieva01_flip-1_mt-on_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-fslAchieva01/anat/{sub-fslAchieva01_flip-1_mt-on_MTS_seg-manual.nii.gz => sub-fslAchieva01_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-fslAchieva01/anat/{sub-fslAchieva01_flip-2_mt-off_MTS_seg-manual.json => sub-fslAchieva01_flip-2_mt-off_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-fslAchieva01/anat/{sub-fslAchieva01_flip-2_mt-off_MTS_seg-manual.nii.gz => sub-fslAchieva01_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-fslAchieva01/anat/{sub-fslAchieva01_T1w_RPI_r_labels-manual.nii.gz => sub-fslAchieva01_space-other_T1w_RPI_r_labels-manual.nii.gz} (100%) rename derivatives/labels/sub-fslAchieva01/anat/{sub-fslAchieva01_T1w_labels-disc-manual.json => sub-fslAchieva01_space-other_T1w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-fslAchieva01/anat/{sub-fslAchieva01_T1w_labels-disc-manual.nii.gz => sub-fslAchieva01_space-other_T1w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-fslAchieva01/anat/{sub-fslAchieva01_T1w_seg-manual.json => sub-fslAchieva01_space-other_T1w_seg-manual.json} (100%) rename derivatives/labels/sub-fslAchieva01/anat/{sub-fslAchieva01_T1w_seg-manual.nii.gz => sub-fslAchieva01_space-other_T1w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-fslAchieva01/anat/{sub-fslAchieva01_T2star_gmseg-manual.json => sub-fslAchieva01_space-other_T2star_gmseg-manual.json} (100%) rename derivatives/labels/sub-fslAchieva01/anat/{sub-fslAchieva01_T2star_gmseg-manual.nii.gz => sub-fslAchieva01_space-other_T2star_gmseg-manual.nii.gz} (100%) rename derivatives/labels/sub-fslAchieva01/anat/{sub-fslAchieva01_T2star_seg-manual.json => sub-fslAchieva01_space-other_T2star_seg-manual.json} (100%) rename derivatives/labels/sub-fslAchieva01/anat/{sub-fslAchieva01_T2star_seg-manual.nii.gz => sub-fslAchieva01_space-other_T2star_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-fslAchieva01/anat/{sub-fslAchieva01_T2w_labels-disc-manual.json => sub-fslAchieva01_space-other_T2w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-fslAchieva01/anat/{sub-fslAchieva01_T2w_labels-disc-manual.nii.gz => sub-fslAchieva01_space-other_T2w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-fslAchieva01/anat/{sub-fslAchieva01_T2w_seg-manual.json => sub-fslAchieva01_space-other_T2w_seg-manual.json} (100%) rename derivatives/labels/sub-fslAchieva01/anat/{sub-fslAchieva01_T2w_seg-manual.nii.gz => sub-fslAchieva01_space-other_T2w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-fslAchieva02/anat/{sub-fslAchieva02_T1w_seg-manual.json => sub-fslAchieva02_flip-1_mt-on_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-fslAchieva02/anat/{sub-fslAchieva02_flip-1_mt-on_MTS_seg-manual.nii.gz => sub-fslAchieva02_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-fslAchieva02/anat/{sub-fslAchieva02_T2star_seg-manual.json => sub-fslAchieva02_flip-2_mt-off_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-fslAchieva02/anat/{sub-fslAchieva02_flip-2_mt-off_MTS_seg-manual.nii.gz => sub-fslAchieva02_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-fslAchieva02/anat/{sub-fslAchieva02_T1w_labels-disc-manual.json => sub-fslAchieva02_space-other_T1w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-fslAchieva02/anat/{sub-fslAchieva02_T1w_labels-disc-manual.nii.gz => sub-fslAchieva02_space-other_T1w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-fslAchieva02/anat/{sub-fslAchieva02_flip-1_mt-on_MTS_seg-manual.json => sub-fslAchieva02_space-other_T1w_seg-manual.json} (100%) rename derivatives/labels/sub-fslAchieva02/anat/{sub-fslAchieva02_T1w_seg-manual.nii.gz => sub-fslAchieva02_space-other_T1w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-fslAchieva02/anat/{sub-fslAchieva02_flip-2_mt-off_MTS_seg-manual.json => sub-fslAchieva02_space-other_T2star_seg-manual.json} (100%) rename derivatives/labels/sub-fslAchieva02/anat/{sub-fslAchieva02_T2star_seg-manual.nii.gz => sub-fslAchieva02_space-other_T2star_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-fslAchieva02/anat/{sub-fslAchieva02_T2w_labels-disc-manual.json => sub-fslAchieva02_space-other_T2w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-fslAchieva02/anat/{sub-fslAchieva02_T2w_labels-disc-manual.nii.gz => sub-fslAchieva02_space-other_T2w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-fslAchieva02/anat/{sub-fslAchieva02_T2w_seg-manual.json => sub-fslAchieva02_space-other_T2w_seg-manual.json} (100%) rename derivatives/labels/sub-fslAchieva02/anat/{sub-fslAchieva02_T2w_seg-manual.nii.gz => sub-fslAchieva02_space-other_T2w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-fslAchieva03/anat/{sub-fslAchieva03_T2star_seg-manual.json => sub-fslAchieva03_flip-1_mt-on_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-fslAchieva03/anat/{sub-fslAchieva03_flip-1_mt-on_MTS_seg-manual.nii.gz => sub-fslAchieva03_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-fslAchieva03/anat/{sub-fslAchieva03_flip-2_mt-off_MTS_seg-manual.json => sub-fslAchieva03_flip-2_mt-off_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-fslAchieva03/anat/{sub-fslAchieva03_flip-2_mt-off_MTS_seg-manual.nii.gz => sub-fslAchieva03_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-fslAchieva03/anat/{sub-fslAchieva03_T1w_labels-disc-manual.json => sub-fslAchieva03_space-other_T1w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-fslAchieva03/anat/{sub-fslAchieva03_T1w_labels-disc-manual.nii.gz => sub-fslAchieva03_space-other_T1w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-fslAchieva03/anat/{sub-fslAchieva03_T1w_seg-manual.json => sub-fslAchieva03_space-other_T1w_seg-manual.json} (100%) rename derivatives/labels/sub-fslAchieva03/anat/{sub-fslAchieva03_T1w_seg-manual.nii.gz => sub-fslAchieva03_space-other_T1w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-fslAchieva03/anat/{sub-fslAchieva03_T2w_seg-manual.json => sub-fslAchieva03_space-other_T2star_seg-manual.json} (100%) rename derivatives/labels/sub-fslAchieva03/anat/{sub-fslAchieva03_T2star_seg-manual.nii.gz => sub-fslAchieva03_space-other_T2star_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-fslAchieva03/anat/{sub-fslAchieva03_T2w_labels-disc-manual.json => sub-fslAchieva03_space-other_T2w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-fslAchieva03/anat/{sub-fslAchieva03_T2w_labels-disc-manual.nii.gz => sub-fslAchieva03_space-other_T2w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-fslAchieva03/anat/{sub-fslAchieva03_flip-1_mt-on_MTS_seg-manual.json => sub-fslAchieva03_space-other_T2w_seg-manual.json} (100%) rename derivatives/labels/sub-fslAchieva03/anat/{sub-fslAchieva03_T2w_seg-manual.nii.gz => sub-fslAchieva03_space-other_T2w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-fslAchieva04/anat/{sub-fslAchieva04_T1w_seg-manual.json => sub-fslAchieva04_flip-1_mt-on_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-fslAchieva04/anat/{sub-fslAchieva04_flip-1_mt-on_MTS_seg-manual.nii.gz => sub-fslAchieva04_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-fslAchieva04/anat/{sub-fslAchieva04_flip-2_mt-off_MTS_seg-manual.json => sub-fslAchieva04_flip-2_mt-off_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-fslAchieva04/anat/{sub-fslAchieva04_flip-2_mt-off_MTS_seg-manual.nii.gz => sub-fslAchieva04_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-fslAchieva04/anat/{sub-fslAchieva04_T1w_labels-disc-manual.json => sub-fslAchieva04_space-other_T1w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-fslAchieva04/anat/{sub-fslAchieva04_T1w_labels-disc-manual.nii.gz => sub-fslAchieva04_space-other_T1w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-fslAchieva04/anat/{sub-fslAchieva04_flip-1_mt-on_MTS_seg-manual.json => sub-fslAchieva04_space-other_T1w_seg-manual.json} (100%) rename derivatives/labels/sub-fslAchieva04/anat/{sub-fslAchieva04_T1w_seg-manual.nii.gz => sub-fslAchieva04_space-other_T1w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-fslAchieva04/anat/{sub-fslAchieva04_T2star_gmseg-manual.json => sub-fslAchieva04_space-other_T2star_gmseg-manual.json} (100%) rename derivatives/labels/sub-fslAchieva04/anat/{sub-fslAchieva04_T2star_gmseg-manual.nii.gz => sub-fslAchieva04_space-other_T2star_gmseg-manual.nii.gz} (100%) rename derivatives/labels/sub-fslAchieva04/anat/{sub-fslAchieva04_T2star_seg-manual.json => sub-fslAchieva04_space-other_T2star_seg-manual.json} (100%) rename derivatives/labels/sub-fslAchieva04/anat/{sub-fslAchieva04_T2star_seg-manual.nii.gz => sub-fslAchieva04_space-other_T2star_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-fslAchieva04/anat/{sub-fslAchieva04_T2w_labels-disc-manual.json => sub-fslAchieva04_space-other_T2w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-fslAchieva04/anat/{sub-fslAchieva04_T2w_labels-disc-manual.nii.gz => sub-fslAchieva04_space-other_T2w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-fslAchieva04/anat/{sub-fslAchieva04_T2w_seg-manual.json => sub-fslAchieva04_space-other_T2w_seg-manual.json} (100%) rename derivatives/labels/sub-fslAchieva04/anat/{sub-fslAchieva04_T2w_seg-manual.nii.gz => sub-fslAchieva04_space-other_T2w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-fslAchieva05/anat/{sub-fslAchieva05_T2star_seg-manual.json => sub-fslAchieva05_flip-1_mt-on_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-fslAchieva05/anat/{sub-fslAchieva05_flip-1_mt-on_MTS_seg-manual.nii.gz => sub-fslAchieva05_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-fslAchieva05/anat/{sub-fslAchieva05_flip-2_mt-off_MTS_seg-manual.json => sub-fslAchieva05_flip-2_mt-off_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-fslAchieva05/anat/{sub-fslAchieva05_flip-2_mt-off_MTS_seg-manual.nii.gz => sub-fslAchieva05_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-fslAchieva05/anat/{sub-fslAchieva05_T1w_labels-disc-manual.json => sub-fslAchieva05_space-other_T1w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-fslAchieva05/anat/{sub-fslAchieva05_T1w_labels-disc-manual.nii.gz => sub-fslAchieva05_space-other_T1w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-fslAchieva05/anat/{sub-fslAchieva05_T1w_seg-manual.json => sub-fslAchieva05_space-other_T1w_seg-manual.json} (100%) rename derivatives/labels/sub-fslAchieva05/anat/{sub-fslAchieva05_T1w_seg-manual.nii.gz => sub-fslAchieva05_space-other_T1w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-fslAchieva05/anat/{sub-fslAchieva05_T2w_seg-manual.json => sub-fslAchieva05_space-other_T2star_seg-manual.json} (100%) rename derivatives/labels/sub-fslAchieva05/anat/{sub-fslAchieva05_T2star_seg-manual.nii.gz => sub-fslAchieva05_space-other_T2star_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-fslAchieva05/anat/{sub-fslAchieva05_T2w_labels-disc-manual.json => sub-fslAchieva05_space-other_T2w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-fslAchieva05/anat/{sub-fslAchieva05_T2w_labels-disc-manual.nii.gz => sub-fslAchieva05_space-other_T2w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-fslAchieva05/anat/{sub-fslAchieva05_flip-1_mt-on_MTS_seg-manual.json => sub-fslAchieva05_space-other_T2w_seg-manual.json} (100%) rename derivatives/labels/sub-fslAchieva05/anat/{sub-fslAchieva05_T2w_seg-manual.nii.gz => sub-fslAchieva05_space-other_T2w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-fslAchieva06/anat/{sub-fslAchieva06_T2star_seg-manual.json => sub-fslAchieva06_flip-1_mt-on_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-fslAchieva06/anat/{sub-fslAchieva06_flip-1_mt-on_MTS_seg-manual.nii.gz => sub-fslAchieva06_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-fslAchieva06/anat/{sub-fslAchieva06_flip-2_mt-off_MTS_seg-manual.json => sub-fslAchieva06_flip-2_mt-off_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-fslAchieva06/anat/{sub-fslAchieva06_flip-2_mt-off_MTS_seg-manual.nii.gz => sub-fslAchieva06_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-fslAchieva06/anat/{sub-fslAchieva06_T1w_labels-disc-manual.json => sub-fslAchieva06_space-other_T1w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-fslAchieva06/anat/{sub-fslAchieva06_T1w_labels-disc-manual.nii.gz => sub-fslAchieva06_space-other_T1w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-fslAchieva06/anat/{sub-fslAchieva06_T1w_seg-manual.json => sub-fslAchieva06_space-other_T1w_seg-manual.json} (100%) rename derivatives/labels/sub-fslAchieva06/anat/{sub-fslAchieva06_T1w_seg-manual.nii.gz => sub-fslAchieva06_space-other_T1w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-fslAchieva06/anat/{sub-fslAchieva06_T2w_seg-manual.json => sub-fslAchieva06_space-other_T2star_seg-manual.json} (100%) rename derivatives/labels/sub-fslAchieva06/anat/{sub-fslAchieva06_T2star_seg-manual.nii.gz => sub-fslAchieva06_space-other_T2star_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-fslAchieva06/anat/{sub-fslAchieva06_T2w_labels-disc-manual.json => sub-fslAchieva06_space-other_T2w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-fslAchieva06/anat/{sub-fslAchieva06_T2w_labels-disc-manual.nii.gz => sub-fslAchieva06_space-other_T2w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-fslAchieva06/anat/{sub-fslAchieva06_flip-1_mt-on_MTS_seg-manual.json => sub-fslAchieva06_space-other_T2w_seg-manual.json} (100%) rename derivatives/labels/sub-fslAchieva06/anat/{sub-fslAchieva06_T2w_seg-manual.nii.gz => sub-fslAchieva06_space-other_T2w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-fslPrisma01/anat/{sub-fslPrisma01_T2star_seg-manual.json => sub-fslPrisma01_flip-1_mt-on_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-fslPrisma01/anat/{sub-fslPrisma01_flip-1_mt-on_MTS_seg-manual.nii.gz => sub-fslPrisma01_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-fslPrisma01/anat/{sub-fslPrisma01_T2w_seg-manual.json => sub-fslPrisma01_flip-2_mt-off_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-fslPrisma01/anat/{sub-fslPrisma01_flip-2_mt-off_MTS_seg-manual.nii.gz => sub-fslPrisma01_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-fslPrisma01/anat/{sub-fslPrisma01_T1w_labels-disc-manual.json => sub-fslPrisma01_space-other_T1w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-fslPrisma01/anat/{sub-fslPrisma01_T1w_labels-disc-manual.nii.gz => sub-fslPrisma01_space-other_T1w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-fslPrisma01/anat/{sub-fslPrisma01_T1w_seg-manual.json => sub-fslPrisma01_space-other_T1w_seg-manual.json} (100%) rename derivatives/labels/sub-fslPrisma01/anat/{sub-fslPrisma01_T1w_seg-manual.nii.gz => sub-fslPrisma01_space-other_T1w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-fslPrisma01/anat/{sub-fslPrisma01_flip-1_mt-on_MTS_seg-manual.json => sub-fslPrisma01_space-other_T2star_seg-manual.json} (100%) rename derivatives/labels/sub-fslPrisma01/anat/{sub-fslPrisma01_T2star_seg-manual.nii.gz => sub-fslPrisma01_space-other_T2star_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-fslPrisma01/anat/{sub-fslPrisma01_T2w_labels-disc-manual.json => sub-fslPrisma01_space-other_T2w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-fslPrisma01/anat/{sub-fslPrisma01_T2w_labels-disc-manual.nii.gz => sub-fslPrisma01_space-other_T2w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-fslPrisma01/anat/{sub-fslPrisma01_flip-2_mt-off_MTS_seg-manual.json => sub-fslPrisma01_space-other_T2w_seg-manual.json} (100%) rename derivatives/labels/sub-fslPrisma01/anat/{sub-fslPrisma01_T2w_seg-manual.nii.gz => sub-fslPrisma01_space-other_T2w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-fslPrisma02/anat/{sub-fslPrisma02_T2star_seg-manual.json => sub-fslPrisma02_flip-1_mt-on_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-fslPrisma02/anat/{sub-fslPrisma02_flip-1_mt-on_MTS_seg-manual.nii.gz => sub-fslPrisma02_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-fslPrisma02/anat/{sub-fslPrisma02_flip-1_mt-on_MTS_seg-manual.json => sub-fslPrisma02_flip-2_mt-off_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-fslPrisma02/anat/{sub-fslPrisma02_flip-2_mt-off_MTS_seg-manual.nii.gz => sub-fslPrisma02_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-fslPrisma02/anat/{sub-fslPrisma02_T1w_labels-disc-manual.json => sub-fslPrisma02_space-other_T1w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-fslPrisma02/anat/{sub-fslPrisma02_T1w_labels-disc-manual.nii.gz => sub-fslPrisma02_space-other_T1w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-fslPrisma02/anat/{sub-fslPrisma02_T1w_seg-manual.json => sub-fslPrisma02_space-other_T1w_seg-manual.json} (100%) rename derivatives/labels/sub-fslPrisma02/anat/{sub-fslPrisma02_T1w_seg-manual.nii.gz => sub-fslPrisma02_space-other_T1w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-fslPrisma02/anat/{sub-fslPrisma02_flip-2_mt-off_MTS_seg-manual.json => sub-fslPrisma02_space-other_T2star_seg-manual.json} (100%) rename derivatives/labels/sub-fslPrisma02/anat/{sub-fslPrisma02_T2star_seg-manual.nii.gz => sub-fslPrisma02_space-other_T2star_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-fslPrisma02/anat/{sub-fslPrisma02_T2w_labels-disc-manual.json => sub-fslPrisma02_space-other_T2w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-fslPrisma02/anat/{sub-fslPrisma02_T2w_labels-disc-manual.nii.gz => sub-fslPrisma02_space-other_T2w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-fslPrisma02/anat/{sub-fslPrisma02_T2w_seg-manual.json => sub-fslPrisma02_space-other_T2w_seg-manual.json} (100%) rename derivatives/labels/sub-fslPrisma02/anat/{sub-fslPrisma02_T2w_seg-manual.nii.gz => sub-fslPrisma02_space-other_T2w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-fslPrisma03/anat/{sub-fslPrisma03_flip-1_mt-on_MTS_seg-manual.json => sub-fslPrisma03_flip-1_mt-on_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-fslPrisma03/anat/{sub-fslPrisma03_flip-1_mt-on_MTS_seg-manual.nii.gz => sub-fslPrisma03_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-fslPrisma03/anat/{sub-fslPrisma03_flip-2_mt-off_MTS_seg-manual.json => sub-fslPrisma03_flip-2_mt-off_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-fslPrisma03/anat/{sub-fslPrisma03_flip-2_mt-off_MTS_seg-manual.nii.gz => sub-fslPrisma03_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-fslPrisma03/anat/{sub-fslPrisma03_T1w_labels-disc-manual.json => sub-fslPrisma03_space-other_T1w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-fslPrisma03/anat/{sub-fslPrisma03_T1w_labels-disc-manual.nii.gz => sub-fslPrisma03_space-other_T1w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-fslPrisma03/anat/{sub-fslPrisma03_T1w_seg-manual.json => sub-fslPrisma03_space-other_T1w_seg-manual.json} (100%) rename derivatives/labels/sub-fslPrisma03/anat/{sub-fslPrisma03_T1w_seg-manual.nii.gz => sub-fslPrisma03_space-other_T1w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-fslPrisma03/anat/{sub-fslPrisma03_T2star_seg-manual.json => sub-fslPrisma03_space-other_T2star_seg-manual.json} (100%) rename derivatives/labels/sub-fslPrisma03/anat/{sub-fslPrisma03_T2star_seg-manual.nii.gz => sub-fslPrisma03_space-other_T2star_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-fslPrisma03/anat/{sub-fslPrisma03_T2w_labels-disc-manual.json => sub-fslPrisma03_space-other_T2w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-fslPrisma03/anat/{sub-fslPrisma03_T2w_labels-disc-manual.nii.gz => sub-fslPrisma03_space-other_T2w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-fslPrisma03/anat/{sub-fslPrisma03_T2w_seg-manual.json => sub-fslPrisma03_space-other_T2w_seg-manual.json} (100%) rename derivatives/labels/sub-fslPrisma03/anat/{sub-fslPrisma03_T2w_seg-manual.nii.gz => sub-fslPrisma03_space-other_T2w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-fslPrisma04/anat/{sub-fslPrisma04_flip-1_mt-on_MTS_seg-manual.json => sub-fslPrisma04_flip-1_mt-on_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-fslPrisma04/anat/{sub-fslPrisma04_flip-1_mt-on_MTS_seg-manual.nii.gz => sub-fslPrisma04_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-fslPrisma04/anat/{sub-fslPrisma04_T2star_seg-manual.json => sub-fslPrisma04_flip-2_mt-off_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-fslPrisma04/anat/{sub-fslPrisma04_flip-2_mt-off_MTS_seg-manual.nii.gz => sub-fslPrisma04_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-fslPrisma04/anat/{sub-fslPrisma04_T1w_labels-disc-manual.json => sub-fslPrisma04_space-other_T1w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-fslPrisma04/anat/{sub-fslPrisma04_T1w_labels-disc-manual.nii.gz => sub-fslPrisma04_space-other_T1w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-fslPrisma04/anat/{sub-fslPrisma04_T1w_seg-manual.json => sub-fslPrisma04_space-other_T1w_seg-manual.json} (100%) rename derivatives/labels/sub-fslPrisma04/anat/{sub-fslPrisma04_T1w_seg-manual.nii.gz => sub-fslPrisma04_space-other_T1w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-fslPrisma04/anat/{sub-fslPrisma04_T2w_seg-manual.json => sub-fslPrisma04_space-other_T2star_seg-manual.json} (100%) rename derivatives/labels/sub-fslPrisma04/anat/{sub-fslPrisma04_T2star_seg-manual.nii.gz => sub-fslPrisma04_space-other_T2star_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-fslPrisma04/anat/{sub-fslPrisma04_T2w_labels-disc-manual.json => sub-fslPrisma04_space-other_T2w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-fslPrisma04/anat/{sub-fslPrisma04_T2w_labels-disc-manual.nii.gz => sub-fslPrisma04_space-other_T2w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-fslPrisma04/anat/{sub-fslPrisma04_flip-2_mt-off_MTS_seg-manual.json => sub-fslPrisma04_space-other_T2w_seg-manual.json} (100%) rename derivatives/labels/sub-fslPrisma04/anat/{sub-fslPrisma04_T2w_seg-manual.nii.gz => sub-fslPrisma04_space-other_T2w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-fslPrisma05/anat/{sub-fslPrisma05_flip-1_mt-on_MTS_seg-manual.json => sub-fslPrisma05_flip-1_mt-on_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-fslPrisma05/anat/{sub-fslPrisma05_flip-1_mt-on_MTS_seg-manual.nii.gz => sub-fslPrisma05_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-fslPrisma05/anat/{sub-fslPrisma05_flip-2_mt-off_MTS_seg-manual.json => sub-fslPrisma05_flip-2_mt-off_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-fslPrisma05/anat/{sub-fslPrisma05_flip-2_mt-off_MTS_seg-manual.nii.gz => sub-fslPrisma05_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-fslPrisma05/anat/{sub-fslPrisma05_T1w_labels-disc-manual.json => sub-fslPrisma05_space-other_T1w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-fslPrisma05/anat/{sub-fslPrisma05_T1w_labels-disc-manual.nii.gz => sub-fslPrisma05_space-other_T1w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-fslPrisma05/anat/{sub-fslPrisma05_T1w_seg-manual.json => sub-fslPrisma05_space-other_T1w_seg-manual.json} (100%) rename derivatives/labels/sub-fslPrisma05/anat/{sub-fslPrisma05_T1w_seg-manual.nii.gz => sub-fslPrisma05_space-other_T1w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-fslPrisma05/anat/{sub-fslPrisma05_T2star_seg-manual.json => sub-fslPrisma05_space-other_T2star_seg-manual.json} (100%) rename derivatives/labels/sub-fslPrisma05/anat/{sub-fslPrisma05_T2star_seg-manual.nii.gz => sub-fslPrisma05_space-other_T2star_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-fslPrisma05/anat/{sub-fslPrisma05_T2w_labels-disc-manual.json => sub-fslPrisma05_space-other_T2w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-fslPrisma05/anat/{sub-fslPrisma05_T2w_labels-disc-manual.nii.gz => sub-fslPrisma05_space-other_T2w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-fslPrisma05/anat/{sub-fslPrisma05_T2w_seg-manual.json => sub-fslPrisma05_space-other_T2w_seg-manual.json} (100%) rename derivatives/labels/sub-fslPrisma05/anat/{sub-fslPrisma05_T2w_seg-manual.nii.gz => sub-fslPrisma05_space-other_T2w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-fslPrisma06/anat/{sub-fslPrisma06_T2w_seg-manual.json => sub-fslPrisma06_flip-1_mt-on_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-fslPrisma06/anat/{sub-fslPrisma06_flip-1_mt-on_MTS_seg-manual.nii.gz => sub-fslPrisma06_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-fslPrisma06/anat/{sub-fslPrisma06_flip-2_mt-off_MTS_seg-manual.json => sub-fslPrisma06_flip-2_mt-off_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-fslPrisma06/anat/{sub-fslPrisma06_flip-2_mt-off_MTS_seg-manual.nii.gz => sub-fslPrisma06_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-fslPrisma06/anat/{sub-fslPrisma06_T1w_labels-disc-manual.json => sub-fslPrisma06_space-other_T1w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-fslPrisma06/anat/{sub-fslPrisma06_T1w_labels-disc-manual.nii.gz => sub-fslPrisma06_space-other_T1w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-fslPrisma06/anat/{sub-fslPrisma06_T1w_seg-manual.json => sub-fslPrisma06_space-other_T1w_seg-manual.json} (100%) rename derivatives/labels/sub-fslPrisma06/anat/{sub-fslPrisma06_T1w_seg-manual.nii.gz => sub-fslPrisma06_space-other_T1w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-fslPrisma06/anat/{sub-fslPrisma06_T2star_seg-manual.json => sub-fslPrisma06_space-other_T2star_seg-manual.json} (100%) rename derivatives/labels/sub-fslPrisma06/anat/{sub-fslPrisma06_T2star_seg-manual.nii.gz => sub-fslPrisma06_space-other_T2star_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-fslPrisma06/anat/{sub-fslPrisma06_T2w_labels-disc-manual.json => sub-fslPrisma06_space-other_T2w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-fslPrisma06/anat/{sub-fslPrisma06_T2w_labels-disc-manual.nii.gz => sub-fslPrisma06_space-other_T2w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-fslPrisma06/anat/{sub-fslPrisma06_flip-1_mt-on_MTS_seg-manual.json => sub-fslPrisma06_space-other_T2w_seg-manual.json} (100%) rename derivatives/labels/sub-fslPrisma06/anat/{sub-fslPrisma06_T2w_seg-manual.nii.gz => sub-fslPrisma06_space-other_T2w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-geneva01/anat/{sub-geneva01_flip-1_mt-on_MTS_seg-manual.json => sub-geneva01_flip-1_mt-on_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-geneva01/anat/{sub-geneva01_flip-1_mt-on_MTS_seg-manual.nii.gz => sub-geneva01_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-geneva01/anat/{sub-geneva01_flip-2_mt-off_MTS_seg-manual.json => sub-geneva01_flip-2_mt-off_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-geneva01/anat/{sub-geneva01_flip-2_mt-off_MTS_seg-manual.nii.gz => sub-geneva01_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-geneva01/anat/{sub-geneva01_T1w_labels-disc-manual.json => sub-geneva01_space-other_T1w_labels-disc-manual.json} (100%) rename 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sub-geneva02_space-other_T2w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-geneva02/anat/{sub-geneva02_T2w_labels-disc-manual.nii.gz => sub-geneva02_space-other_T2w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-geneva02/anat/{sub-geneva02_T2w_seg-manual.json => sub-geneva02_space-other_T2w_seg-manual.json} (100%) rename derivatives/labels/sub-geneva02/anat/{sub-geneva02_T2w_seg-manual.nii.gz => sub-geneva02_space-other_T2w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-geneva03/anat/{sub-geneva03_flip-1_mt-on_MTS_seg-manual.json => sub-geneva03_flip-1_mt-on_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-geneva03/anat/{sub-geneva03_flip-1_mt-on_MTS_seg-manual.nii.gz => sub-geneva03_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-geneva03/anat/{sub-geneva03_flip-2_mt-off_MTS_seg-manual.json => sub-geneva03_flip-2_mt-off_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-geneva03/anat/{sub-geneva03_flip-2_mt-off_MTS_seg-manual.nii.gz => sub-geneva03_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-geneva03/anat/{sub-geneva03_T1w_labels-disc-manual.json => sub-geneva03_space-other_T1w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-geneva03/anat/{sub-geneva03_T1w_labels-disc-manual.nii.gz => sub-geneva03_space-other_T1w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-geneva03/anat/{sub-geneva03_T1w_seg-manual.json => sub-geneva03_space-other_T1w_seg-manual.json} (100%) rename derivatives/labels/sub-geneva03/anat/{sub-geneva03_T1w_seg-manual.nii.gz => sub-geneva03_space-other_T1w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-geneva03/anat/{sub-geneva03_T2star_seg-manual.json => sub-geneva03_space-other_T2star_seg-manual.json} (100%) rename derivatives/labels/sub-geneva03/anat/{sub-geneva03_T2star_seg-manual.nii.gz => sub-geneva03_space-other_T2star_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-geneva03/anat/{sub-geneva03_T2w_labels-disc-manual.json => sub-geneva03_space-other_T2w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-geneva03/anat/{sub-geneva03_T2w_labels-disc-manual.nii.gz => sub-geneva03_space-other_T2w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-geneva03/anat/{sub-geneva03_T2w_seg-manual.json => sub-geneva03_space-other_T2w_seg-manual.json} (100%) rename derivatives/labels/sub-geneva03/anat/{sub-geneva03_T2w_seg-manual.nii.gz => sub-geneva03_space-other_T2w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-geneva04/anat/{sub-geneva04_flip-1_mt-on_MTS_seg-manual.json => sub-geneva04_flip-1_mt-on_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-geneva04/anat/{sub-geneva04_flip-1_mt-on_MTS_seg-manual.nii.gz => sub-geneva04_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-geneva04/anat/{sub-geneva04_flip-2_mt-off_MTS_seg-manual.json => sub-geneva04_flip-2_mt-off_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-geneva04/anat/{sub-geneva04_flip-2_mt-off_MTS_seg-manual.nii.gz => sub-geneva04_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-geneva04/anat/{sub-geneva04_T1w_labels-disc-manual.json => sub-geneva04_space-other_T1w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-geneva04/anat/{sub-geneva04_T1w_labels-disc-manual.nii.gz => sub-geneva04_space-other_T1w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-geneva04/anat/{sub-geneva04_T1w_seg-manual.json => sub-geneva04_space-other_T1w_seg-manual.json} (100%) rename derivatives/labels/sub-geneva04/anat/{sub-geneva04_T1w_seg-manual.nii.gz => sub-geneva04_space-other_T1w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-geneva04/anat/{sub-geneva04_T2star_seg-manual.json => sub-geneva04_space-other_T2star_seg-manual.json} (100%) rename derivatives/labels/sub-geneva04/anat/{sub-geneva04_T2star_seg-manual.nii.gz => sub-geneva04_space-other_T2star_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-geneva04/anat/{sub-geneva04_T2w_csfseg-manual.json => sub-geneva04_space-other_T2w_csfseg-manual.json} (100%) rename derivatives/labels/sub-geneva04/anat/{sub-geneva04_T2w_csfseg-manual.nii.gz => sub-geneva04_space-other_T2w_csfseg-manual.nii.gz} (100%) rename derivatives/labels/sub-geneva04/anat/{sub-geneva04_T2w_labels-disc-manual.json => sub-geneva04_space-other_T2w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-geneva04/anat/{sub-geneva04_T2w_labels-disc-manual.nii.gz => sub-geneva04_space-other_T2w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-geneva04/anat/{sub-geneva04_T2w_seg-manual.json => sub-geneva04_space-other_T2w_seg-manual.json} (100%) rename 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derivatives/labels/sub-hamburg01/anat/{sub-hamburg01_flip-2_mt-off_MTS_seg-manual.nii.gz => sub-hamburg01_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-hamburg01/anat/{sub-hamburg01_T1w_labels-disc-manual.json => sub-hamburg01_space-other_T1w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-hamburg01/anat/{sub-hamburg01_T1w_labels-disc-manual.nii.gz => sub-hamburg01_space-other_T1w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-hamburg01/anat/{sub-hamburg01_T1w_seg-manual.json => sub-hamburg01_space-other_T1w_seg-manual.json} (100%) rename derivatives/labels/sub-hamburg01/anat/{sub-hamburg01_T1w_seg-manual.nii.gz => sub-hamburg01_space-other_T1w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-hamburg01/anat/{sub-hamburg01_flip-1_mt-on_MTS_seg-manual.json => sub-hamburg01_space-other_T2star_seg-manual.json} (100%) rename derivatives/labels/sub-hamburg01/anat/{sub-hamburg01_T2star_seg-manual.nii.gz => sub-hamburg01_space-other_T2star_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-hamburg01/anat/{sub-hamburg01_T2w_labels-disc-manual.json => sub-hamburg01_space-other_T2w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-hamburg01/anat/{sub-hamburg01_T2w_labels-disc-manual.nii.gz => sub-hamburg01_space-other_T2w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-hamburg01/anat/{sub-hamburg01_T2w_seg-manual.json => sub-hamburg01_space-other_T2w_seg-manual.json} (100%) rename derivatives/labels/sub-hamburg01/anat/{sub-hamburg01_T2w_seg-manual.nii.gz => sub-hamburg01_space-other_T2w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-hamburg02/anat/{sub-hamburg02_flip-1_mt-on_MTS_seg-manual.json => sub-hamburg02_flip-1_mt-on_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-hamburg02/anat/{sub-hamburg02_flip-1_mt-on_MTS_seg-manual.nii.gz => sub-hamburg02_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-hamburg02/anat/{sub-hamburg02_flip-2_mt-off_MTS_seg-manual.json => sub-hamburg02_flip-2_mt-off_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-hamburg02/anat/{sub-hamburg02_flip-2_mt-off_MTS_seg-manual.nii.gz => sub-hamburg02_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-hamburg02/anat/{sub-hamburg02_T1w_labels-disc-manual.json => sub-hamburg02_space-other_T1w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-hamburg02/anat/{sub-hamburg02_T1w_labels-disc-manual.nii.gz => sub-hamburg02_space-other_T1w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-hamburg02/anat/{sub-hamburg02_T1w_seg-manual.json => sub-hamburg02_space-other_T1w_seg-manual.json} (100%) rename derivatives/labels/sub-hamburg02/anat/{sub-hamburg02_T1w_seg-manual.nii.gz => sub-hamburg02_space-other_T1w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-hamburg02/anat/{sub-hamburg02_T2star_seg-manual.json => sub-hamburg02_space-other_T2star_seg-manual.json} (100%) rename derivatives/labels/sub-hamburg02/anat/{sub-hamburg02_T2star_seg-manual.nii.gz => sub-hamburg02_space-other_T2star_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-hamburg02/anat/{sub-hamburg02_T2w_labels-disc-manual.json => sub-hamburg02_space-other_T2w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-hamburg02/anat/{sub-hamburg02_T2w_labels-disc-manual.nii.gz => sub-hamburg02_space-other_T2w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-hamburg02/anat/{sub-hamburg02_T2w_seg-manual.json => sub-hamburg02_space-other_T2w_seg-manual.json} (100%) rename derivatives/labels/sub-hamburg02/anat/{sub-hamburg02_T2w_seg-manual.nii.gz => sub-hamburg02_space-other_T2w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-hamburg03/anat/{sub-hamburg03_flip-1_mt-on_MTS_seg-manual.json => sub-hamburg03_flip-1_mt-on_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-hamburg03/anat/{sub-hamburg03_flip-1_mt-on_MTS_seg-manual.nii.gz => sub-hamburg03_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-hamburg03/anat/{sub-hamburg03_flip-2_mt-off_MTS_seg-manual.json => sub-hamburg03_flip-2_mt-off_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-hamburg03/anat/{sub-hamburg03_flip-2_mt-off_MTS_seg-manual.nii.gz => sub-hamburg03_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-hamburg03/anat/{sub-hamburg03_T1w_labels-disc-manual.json => sub-hamburg03_space-other_T1w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-hamburg03/anat/{sub-hamburg03_T1w_labels-disc-manual.nii.gz => sub-hamburg03_space-other_T1w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-hamburg03/anat/{sub-hamburg03_T1w_seg-manual.json => sub-hamburg03_space-other_T1w_seg-manual.json} (100%) rename derivatives/labels/sub-hamburg03/anat/{sub-hamburg03_T1w_seg-manual.nii.gz => sub-hamburg03_space-other_T1w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-hamburg03/anat/{sub-hamburg03_T2star_seg-manual.json => sub-hamburg03_space-other_T2star_seg-manual.json} (100%) rename derivatives/labels/sub-hamburg03/anat/{sub-hamburg03_T2star_seg-manual.nii.gz => sub-hamburg03_space-other_T2star_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-hamburg03/anat/{sub-hamburg03_T2w_labels-disc-manual.json => sub-hamburg03_space-other_T2w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-hamburg03/anat/{sub-hamburg03_T2w_labels-disc-manual.nii.gz => sub-hamburg03_space-other_T2w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-hamburg03/anat/{sub-hamburg03_T2w_seg-manual.json => sub-hamburg03_space-other_T2w_seg-manual.json} (100%) rename derivatives/labels/sub-hamburg03/anat/{sub-hamburg03_T2w_seg-manual.nii.gz => sub-hamburg03_space-other_T2w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-hamburg04/anat/{sub-hamburg04_flip-1_mt-on_MTS_seg-manual.json => sub-hamburg04_flip-1_mt-on_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-hamburg04/anat/{sub-hamburg04_flip-1_mt-on_MTS_seg-manual.nii.gz => sub-hamburg04_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-hamburg04/anat/{sub-hamburg04_flip-2_mt-off_MTS_seg-manual.json => sub-hamburg04_flip-2_mt-off_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-hamburg04/anat/{sub-hamburg04_flip-2_mt-off_MTS_seg-manual.nii.gz => sub-hamburg04_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-hamburg04/anat/{sub-hamburg04_T1w_labels-disc-manual.json => sub-hamburg04_space-other_T1w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-hamburg04/anat/{sub-hamburg04_T1w_labels-disc-manual.nii.gz => sub-hamburg04_space-other_T1w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-hamburg04/anat/{sub-hamburg04_T1w_seg-manual.json => sub-hamburg04_space-other_T1w_seg-manual.json} (100%) rename derivatives/labels/sub-hamburg04/anat/{sub-hamburg04_T1w_seg-manual.nii.gz => sub-hamburg04_space-other_T1w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-hamburg04/anat/{sub-hamburg04_T2star_seg-manual.json => sub-hamburg04_space-other_T2star_seg-manual.json} (100%) rename derivatives/labels/sub-hamburg04/anat/{sub-hamburg04_T2star_seg-manual.nii.gz => sub-hamburg04_space-other_T2star_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-hamburg04/anat/{sub-hamburg04_T2w_labels-disc-manual.json => sub-hamburg04_space-other_T2w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-hamburg04/anat/{sub-hamburg04_T2w_labels-disc-manual.nii.gz => sub-hamburg04_space-other_T2w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-hamburg04/anat/{sub-hamburg04_T2w_seg-manual.json => sub-hamburg04_space-other_T2w_seg-manual.json} (100%) rename derivatives/labels/sub-hamburg04/anat/{sub-hamburg04_T2w_seg-manual.nii.gz => sub-hamburg04_space-other_T2w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-hamburg05/anat/{sub-hamburg05_flip-1_mt-on_MTS_seg-manual.json => sub-hamburg05_flip-1_mt-on_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-hamburg05/anat/{sub-hamburg05_flip-1_mt-on_MTS_seg-manual.nii.gz => sub-hamburg05_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-hamburg05/anat/{sub-hamburg05_flip-2_mt-off_MTS_seg-manual.json => sub-hamburg05_flip-2_mt-off_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-hamburg05/anat/{sub-hamburg05_flip-2_mt-off_MTS_seg-manual.nii.gz => sub-hamburg05_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-hamburg05/anat/{sub-hamburg05_T1w_labels-disc-manual.json => sub-hamburg05_space-other_T1w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-hamburg05/anat/{sub-hamburg05_T1w_labels-disc-manual.nii.gz => sub-hamburg05_space-other_T1w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-hamburg05/anat/{sub-hamburg05_T1w_seg-manual.json => sub-hamburg05_space-other_T1w_seg-manual.json} (100%) rename derivatives/labels/sub-hamburg05/anat/{sub-hamburg05_T1w_seg-manual.nii.gz => sub-hamburg05_space-other_T1w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-hamburg05/anat/{sub-hamburg05_T2star_seg-manual.json => sub-hamburg05_space-other_T2star_seg-manual.json} (100%) rename derivatives/labels/sub-hamburg05/anat/{sub-hamburg05_T2star_seg-manual.nii.gz => sub-hamburg05_space-other_T2star_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-hamburg05/anat/{sub-hamburg05_T2w_labels-disc-manual.json => sub-hamburg05_space-other_T2w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-hamburg05/anat/{sub-hamburg05_T2w_labels-disc-manual.nii.gz => sub-hamburg05_space-other_T2w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-hamburg05/anat/{sub-hamburg05_T2w_seg-manual.json => sub-hamburg05_space-other_T2w_seg-manual.json} (100%) rename derivatives/labels/sub-hamburg05/anat/{sub-hamburg05_T2w_seg-manual.nii.gz => sub-hamburg05_space-other_T2w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-hamburg06/anat/{sub-hamburg06_T2star_seg-manual.json => sub-hamburg06_flip-1_mt-on_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-hamburg06/anat/{sub-hamburg06_flip-1_mt-on_MTS_seg-manual.nii.gz => sub-hamburg06_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-hamburg06/anat/{sub-hamburg06_flip-1_mt-on_MTS_seg-manual.json => sub-hamburg06_flip-2_mt-off_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-hamburg06/anat/{sub-hamburg06_flip-2_mt-off_MTS_seg-manual.nii.gz => sub-hamburg06_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-hamburg06/anat/{sub-hamburg06_T1w_labels-disc-manual.json => sub-hamburg06_space-other_T1w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-hamburg06/anat/{sub-hamburg06_T1w_labels-disc-manual.nii.gz => sub-hamburg06_space-other_T1w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-hamburg06/anat/{sub-hamburg06_T1w_seg-manual.json => sub-hamburg06_space-other_T1w_seg-manual.json} (100%) rename derivatives/labels/sub-hamburg06/anat/{sub-hamburg06_T1w_seg-manual.nii.gz => sub-hamburg06_space-other_T1w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-hamburg06/anat/{sub-hamburg06_flip-2_mt-off_MTS_seg-manual.json => sub-hamburg06_space-other_T2star_seg-manual.json} (100%) rename derivatives/labels/sub-hamburg06/anat/{sub-hamburg06_T2star_seg-manual.nii.gz => sub-hamburg06_space-other_T2star_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-hamburg06/anat/{sub-hamburg06_T2w_labels-disc-manual.json => sub-hamburg06_space-other_T2w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-hamburg06/anat/{sub-hamburg06_T2w_labels-disc-manual.nii.gz => sub-hamburg06_space-other_T2w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-hamburg06/anat/{sub-hamburg06_T2w_seg-manual.json => sub-hamburg06_space-other_T2w_seg-manual.json} (100%) rename derivatives/labels/sub-hamburg06/anat/{sub-hamburg06_T2w_seg-manual.nii.gz => sub-hamburg06_space-other_T2w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-juntendo750w01/anat/{sub-juntendo750w01_T2star_seg-manual.json => sub-juntendo750w01_flip-1_mt-on_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-juntendo750w01/anat/{sub-juntendo750w01_flip-1_mt-on_MTS_seg-manual.nii.gz => sub-juntendo750w01_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-juntendo750w01/anat/{sub-juntendo750w01_flip-1_mt-on_MTS_seg-manual.json => sub-juntendo750w01_flip-2_mt-off_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-juntendo750w01/anat/{sub-juntendo750w01_flip-2_mt-off_MTS_seg-manual.nii.gz => sub-juntendo750w01_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-juntendo750w01/anat/{sub-juntendo750w01_T1w_labels-disc-manual.json => sub-juntendo750w01_space-other_T1w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-juntendo750w01/anat/{sub-juntendo750w01_T1w_labels-disc-manual.nii.gz => sub-juntendo750w01_space-other_T1w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-juntendo750w01/anat/{sub-juntendo750w01_T1w_seg-manual.json => sub-juntendo750w01_space-other_T1w_seg-manual.json} (100%) rename derivatives/labels/sub-juntendo750w01/anat/{sub-juntendo750w01_T1w_seg-manual.nii.gz => sub-juntendo750w01_space-other_T1w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-juntendo750w01/anat/{sub-juntendo750w01_flip-2_mt-off_MTS_seg-manual.json => sub-juntendo750w01_space-other_T2star_seg-manual.json} (100%) rename derivatives/labels/sub-juntendo750w01/anat/{sub-juntendo750w01_T2star_seg-manual.nii.gz => sub-juntendo750w01_space-other_T2star_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-juntendo750w01/anat/{sub-juntendo750w01_T2w_labels-disc-manual.json => sub-juntendo750w01_space-other_T2w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-juntendo750w01/anat/{sub-juntendo750w01_T2w_labels-disc-manual.nii.gz => sub-juntendo750w01_space-other_T2w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-juntendo750w01/anat/{sub-juntendo750w01_T2w_seg-manual.json => sub-juntendo750w01_space-other_T2w_seg-manual.json} (100%) rename derivatives/labels/sub-juntendo750w01/anat/{sub-juntendo750w01_T2w_seg-manual.nii.gz => sub-juntendo750w01_space-other_T2w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-juntendo750w02/anat/{sub-juntendo750w02_flip-1_mt-on_MTS_seg-manual.json => sub-juntendo750w02_flip-1_mt-on_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-juntendo750w02/anat/{sub-juntendo750w02_flip-1_mt-on_MTS_seg-manual.nii.gz => sub-juntendo750w02_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-juntendo750w02/anat/{sub-juntendo750w02_T2star_seg-manual.json => sub-juntendo750w02_flip-2_mt-off_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-juntendo750w02/anat/{sub-juntendo750w02_flip-2_mt-off_MTS_seg-manual.nii.gz => sub-juntendo750w02_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-juntendo750w02/anat/{sub-juntendo750w02_T1w_labels-disc-manual.json => sub-juntendo750w02_space-other_T1w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-juntendo750w02/anat/{sub-juntendo750w02_T1w_labels-disc-manual.nii.gz => sub-juntendo750w02_space-other_T1w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-juntendo750w02/anat/{sub-juntendo750w02_T1w_seg-manual.json => sub-juntendo750w02_space-other_T1w_seg-manual.json} (100%) rename derivatives/labels/sub-juntendo750w02/anat/{sub-juntendo750w02_T1w_seg-manual.nii.gz => sub-juntendo750w02_space-other_T1w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-juntendo750w02/anat/{sub-juntendo750w02_flip-2_mt-off_MTS_seg-manual.json => sub-juntendo750w02_space-other_T2star_seg-manual.json} (100%) rename derivatives/labels/sub-juntendo750w02/anat/{sub-juntendo750w02_T2star_seg-manual.nii.gz => sub-juntendo750w02_space-other_T2star_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-juntendo750w02/anat/{sub-juntendo750w02_T2w_labels-disc-manual.json => sub-juntendo750w02_space-other_T2w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-juntendo750w02/anat/{sub-juntendo750w02_T2w_labels-disc-manual.nii.gz => sub-juntendo750w02_space-other_T2w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-juntendo750w02/anat/{sub-juntendo750w02_T2w_seg-manual.json => sub-juntendo750w02_space-other_T2w_seg-manual.json} (100%) rename derivatives/labels/sub-juntendo750w02/anat/{sub-juntendo750w02_T2w_seg-manual.nii.gz => sub-juntendo750w02_space-other_T2w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-juntendo750w03/anat/{sub-juntendo750w03_flip-1_mt-on_MTS_seg-manual.json => sub-juntendo750w03_flip-1_mt-on_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-juntendo750w03/anat/{sub-juntendo750w03_flip-1_mt-on_MTS_seg-manual.nii.gz => sub-juntendo750w03_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-juntendo750w03/anat/{sub-juntendo750w03_flip-2_mt-off_MTS_seg-manual.json => sub-juntendo750w03_flip-2_mt-off_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-juntendo750w03/anat/{sub-juntendo750w03_flip-2_mt-off_MTS_seg-manual.nii.gz => sub-juntendo750w03_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-juntendo750w03/anat/{sub-juntendo750w03_T1w_labels-disc-manual.json => sub-juntendo750w03_space-other_T1w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-juntendo750w03/anat/{sub-juntendo750w03_T1w_labels-disc-manual.nii.gz => sub-juntendo750w03_space-other_T1w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-juntendo750w03/anat/{sub-juntendo750w03_T1w_seg-manual.json => sub-juntendo750w03_space-other_T1w_seg-manual.json} (100%) rename derivatives/labels/sub-juntendo750w03/anat/{sub-juntendo750w03_T1w_seg-manual.nii.gz => sub-juntendo750w03_space-other_T1w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-juntendo750w03/anat/{sub-juntendo750w03_T2star_seg-manual.json => sub-juntendo750w03_space-other_T2star_seg-manual.json} (100%) rename derivatives/labels/sub-juntendo750w03/anat/{sub-juntendo750w03_T2star_seg-manual.nii.gz => sub-juntendo750w03_space-other_T2star_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-juntendo750w03/anat/{sub-juntendo750w03_T2w_labels-disc-manual.json => sub-juntendo750w03_space-other_T2w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-juntendo750w03/anat/{sub-juntendo750w03_T2w_labels-disc-manual.nii.gz => sub-juntendo750w03_space-other_T2w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-juntendo750w03/anat/{sub-juntendo750w03_T2w_seg-manual.json => sub-juntendo750w03_space-other_T2w_seg-manual.json} (100%) rename derivatives/labels/sub-juntendo750w03/anat/{sub-juntendo750w03_T2w_seg-manual.nii.gz => sub-juntendo750w03_space-other_T2w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-juntendo750w04/anat/{sub-juntendo750w04_flip-1_mt-on_MTS_seg-manual.json => sub-juntendo750w04_flip-1_mt-on_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-juntendo750w04/anat/{sub-juntendo750w04_flip-1_mt-on_MTS_seg-manual.nii.gz => sub-juntendo750w04_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-juntendo750w04/anat/{sub-juntendo750w04_T2star_seg-manual.json => sub-juntendo750w04_flip-2_mt-off_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-juntendo750w04/anat/{sub-juntendo750w04_flip-2_mt-off_MTS_seg-manual.nii.gz => sub-juntendo750w04_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-juntendo750w04/anat/{sub-juntendo750w04_T1w_labels-disc-manual.json => sub-juntendo750w04_space-other_T1w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-juntendo750w04/anat/{sub-juntendo750w04_T1w_labels-disc-manual.nii.gz => sub-juntendo750w04_space-other_T1w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-juntendo750w04/anat/{sub-juntendo750w04_T1w_seg-manual.json => sub-juntendo750w04_space-other_T1w_seg-manual.json} (100%) rename derivatives/labels/sub-juntendo750w04/anat/{sub-juntendo750w04_T1w_seg-manual.nii.gz => sub-juntendo750w04_space-other_T1w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-juntendo750w04/anat/{sub-juntendo750w04_flip-2_mt-off_MTS_seg-manual.json => sub-juntendo750w04_space-other_T2star_seg-manual.json} (100%) rename derivatives/labels/sub-juntendo750w04/anat/{sub-juntendo750w04_T2star_seg-manual.nii.gz => sub-juntendo750w04_space-other_T2star_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-juntendo750w04/anat/{sub-juntendo750w04_T2w_labels-disc-manual.json => sub-juntendo750w04_space-other_T2w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-juntendo750w04/anat/{sub-juntendo750w04_T2w_labels-disc-manual.nii.gz => sub-juntendo750w04_space-other_T2w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-juntendo750w04/anat/{sub-juntendo750w04_T2w_seg-manual.json => sub-juntendo750w04_space-other_T2w_seg-manual.json} (100%) rename derivatives/labels/sub-juntendo750w04/anat/{sub-juntendo750w04_T2w_seg-manual.nii.gz => sub-juntendo750w04_space-other_T2w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-juntendo750w05/anat/{sub-juntendo750w05_flip-1_mt-on_MTS_seg-manual.json => sub-juntendo750w05_flip-1_mt-on_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-juntendo750w05/anat/{sub-juntendo750w05_flip-1_mt-on_MTS_seg-manual.nii.gz => sub-juntendo750w05_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-juntendo750w05/anat/{sub-juntendo750w05_flip-2_mt-off_MTS_seg-manual.json => sub-juntendo750w05_flip-2_mt-off_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-juntendo750w05/anat/{sub-juntendo750w05_flip-2_mt-off_MTS_seg-manual.nii.gz => sub-juntendo750w05_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-juntendo750w05/anat/{sub-juntendo750w05_T1w_labels-disc-manual.json => sub-juntendo750w05_space-other_T1w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-juntendo750w05/anat/{sub-juntendo750w05_T1w_labels-disc-manual.nii.gz => sub-juntendo750w05_space-other_T1w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-juntendo750w05/anat/{sub-juntendo750w05_T1w_seg-manual.json => sub-juntendo750w05_space-other_T1w_seg-manual.json} (100%) rename derivatives/labels/sub-juntendo750w05/anat/{sub-juntendo750w05_T1w_seg-manual.nii.gz => sub-juntendo750w05_space-other_T1w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-juntendo750w05/anat/{sub-juntendo750w05_T2star_seg-manual.json => sub-juntendo750w05_space-other_T2star_seg-manual.json} (100%) rename derivatives/labels/sub-juntendo750w05/anat/{sub-juntendo750w05_T2star_seg-manual.nii.gz => sub-juntendo750w05_space-other_T2star_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-juntendo750w05/anat/{sub-juntendo750w05_T2w_labels-disc-manual.json => sub-juntendo750w05_space-other_T2w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-juntendo750w05/anat/{sub-juntendo750w05_T2w_labels-disc-manual.nii.gz => sub-juntendo750w05_space-other_T2w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-juntendo750w05/anat/{sub-juntendo750w05_T2w_seg-manual.json => sub-juntendo750w05_space-other_T2w_seg-manual.json} (100%) rename derivatives/labels/sub-juntendo750w05/anat/{sub-juntendo750w05_T2w_seg-manual.nii.gz => sub-juntendo750w05_space-other_T2w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-juntendo750w06/anat/{sub-juntendo750w06_flip-1_mt-on_MTS_seg-manual.json => sub-juntendo750w06_flip-1_mt-on_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-juntendo750w06/anat/{sub-juntendo750w06_flip-1_mt-on_MTS_seg-manual.nii.gz => sub-juntendo750w06_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-juntendo750w06/anat/{sub-juntendo750w06_flip-2_mt-off_MTS_seg-manual.json => sub-juntendo750w06_flip-2_mt-off_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-juntendo750w06/anat/{sub-juntendo750w06_flip-2_mt-off_MTS_seg-manual.nii.gz => sub-juntendo750w06_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-juntendo750w06/anat/{sub-juntendo750w06_T1w_labels-disc-manual.json => sub-juntendo750w06_space-other_T1w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-juntendo750w06/anat/{sub-juntendo750w06_T1w_labels-disc-manual.nii.gz => sub-juntendo750w06_space-other_T1w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-juntendo750w06/anat/{sub-juntendo750w06_T1w_seg-manual.json => sub-juntendo750w06_space-other_T1w_seg-manual.json} (100%) rename derivatives/labels/sub-juntendo750w06/anat/{sub-juntendo750w06_T1w_seg-manual.nii.gz => sub-juntendo750w06_space-other_T1w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-juntendo750w06/anat/{sub-juntendo750w06_T2star_seg-manual.json => sub-juntendo750w06_space-other_T2star_seg-manual.json} (100%) rename derivatives/labels/sub-juntendo750w06/anat/{sub-juntendo750w06_T2star_seg-manual.nii.gz => sub-juntendo750w06_space-other_T2star_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-juntendo750w06/anat/{sub-juntendo750w06_T2w_labels-disc-manual.json => sub-juntendo750w06_space-other_T2w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-juntendo750w06/anat/{sub-juntendo750w06_T2w_labels-disc-manual.nii.gz => sub-juntendo750w06_space-other_T2w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-juntendo750w06/anat/{sub-juntendo750w06_T2w_seg-manual.json => sub-juntendo750w06_space-other_T2w_seg-manual.json} (100%) rename derivatives/labels/sub-juntendo750w06/anat/{sub-juntendo750w06_T2w_seg-manual.nii.gz => sub-juntendo750w06_space-other_T2w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-mgh01/anat/{sub-mgh01_flip-1_mt-on_MTS_seg-manual.json => sub-mgh01_flip-1_mt-on_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-mgh01/anat/{sub-mgh01_flip-1_mt-on_MTS_seg-manual.nii.gz => sub-mgh01_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-mgh01/anat/{sub-mgh01_flip-2_mt-off_MTS_seg-manual.json => sub-mgh01_flip-2_mt-off_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-mgh01/anat/{sub-mgh01_flip-2_mt-off_MTS_seg-manual.nii.gz => sub-mgh01_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-mgh01/anat/{sub-mgh01_T1w_RPI_r_labels-manual.nii.gz => sub-mgh01_space-other_T1w_RPI_r_labels-manual.nii.gz} (100%) rename derivatives/labels/sub-mgh01/anat/{sub-mgh01_T1w_labels-disc-manual.json => sub-mgh01_space-other_T1w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-mgh01/anat/{sub-mgh01_T1w_labels-disc-manual.nii.gz => sub-mgh01_space-other_T1w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-mgh01/anat/{sub-mgh01_T1w_seg-manual.json => sub-mgh01_space-other_T1w_seg-manual.json} (100%) rename derivatives/labels/sub-mgh01/anat/{sub-mgh01_T1w_seg-manual.nii.gz => sub-mgh01_space-other_T1w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-mgh01/anat/{sub-mgh01_T2star_seg-manual.json => sub-mgh01_space-other_T2star_seg-manual.json} (100%) rename derivatives/labels/sub-mgh01/anat/{sub-mgh01_T2star_seg-manual.nii.gz => sub-mgh01_space-other_T2star_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-mgh01/anat/{sub-mgh01_T2w_labels-disc-manual.json => sub-mgh01_space-other_T2w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-mgh01/anat/{sub-mgh01_T2w_labels-disc-manual.nii.gz => sub-mgh01_space-other_T2w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-mgh01/anat/{sub-mgh01_T2w_seg-manual.json => sub-mgh01_space-other_T2w_seg-manual.json} (100%) rename derivatives/labels/sub-mgh01/anat/{sub-mgh01_T2w_seg-manual.nii.gz => sub-mgh01_space-other_T2w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-mgh02/anat/{sub-mgh02_flip-1_mt-on_MTS_seg-manual.json => sub-mgh02_flip-1_mt-on_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-mgh02/anat/{sub-mgh02_flip-1_mt-on_MTS_seg-manual.nii.gz => sub-mgh02_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-mgh02/anat/{sub-mgh02_flip-2_mt-off_MTS_seg-manual.json => sub-mgh02_flip-2_mt-off_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-mgh02/anat/{sub-mgh02_flip-2_mt-off_MTS_seg-manual.nii.gz => sub-mgh02_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-mgh02/anat/{sub-mgh02_T1w_RPI_r_labels-manual.nii.gz => sub-mgh02_space-other_T1w_RPI_r_labels-manual.nii.gz} (100%) rename derivatives/labels/sub-mgh02/anat/{sub-mgh02_T1w_labels-disc-manual.json => sub-mgh02_space-other_T1w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-mgh02/anat/{sub-mgh02_T1w_labels-disc-manual.nii.gz => sub-mgh02_space-other_T1w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-mgh02/anat/{sub-mgh02_T1w_seg-manual.json => sub-mgh02_space-other_T1w_seg-manual.json} (100%) rename derivatives/labels/sub-mgh02/anat/{sub-mgh02_T1w_seg-manual.nii.gz => sub-mgh02_space-other_T1w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-mgh02/anat/{sub-mgh02_T2star_seg-manual.json => sub-mgh02_space-other_T2star_seg-manual.json} (100%) rename derivatives/labels/sub-mgh02/anat/{sub-mgh02_T2star_seg-manual.nii.gz => sub-mgh02_space-other_T2star_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-mgh02/anat/{sub-mgh02_T2w_labels-disc-manual.json => sub-mgh02_space-other_T2w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-mgh02/anat/{sub-mgh02_T2w_labels-disc-manual.nii.gz => sub-mgh02_space-other_T2w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-mgh02/anat/{sub-mgh02_T2w_seg-manual.json => sub-mgh02_space-other_T2w_seg-manual.json} (100%) rename derivatives/labels/sub-mgh02/anat/{sub-mgh02_T2w_seg-manual.nii.gz => sub-mgh02_space-other_T2w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-mgh03/anat/{sub-mgh03_T2star_seg-manual.json => sub-mgh03_flip-1_mt-on_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-mgh03/anat/{sub-mgh03_flip-1_mt-on_MTS_seg-manual.nii.gz => sub-mgh03_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-mgh03/anat/{sub-mgh03_flip-2_mt-off_MTS_seg-manual.json => sub-mgh03_flip-2_mt-off_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-mgh03/anat/{sub-mgh03_flip-2_mt-off_MTS_seg-manual.nii.gz => sub-mgh03_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-mgh03/anat/{sub-mgh03_T1w_labels-disc-manual.json => sub-mgh03_space-other_T1w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-mgh03/anat/{sub-mgh03_T1w_labels-disc-manual.nii.gz => sub-mgh03_space-other_T1w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-mgh03/anat/{sub-mgh03_T1w_seg-manual.json => sub-mgh03_space-other_T1w_seg-manual.json} (100%) rename derivatives/labels/sub-mgh03/anat/{sub-mgh03_T1w_seg-manual.nii.gz => sub-mgh03_space-other_T1w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-mgh03/anat/{sub-mgh03_T2w_seg-manual.json => sub-mgh03_space-other_T2star_seg-manual.json} (100%) rename derivatives/labels/sub-mgh03/anat/{sub-mgh03_T2star_seg-manual.nii.gz => sub-mgh03_space-other_T2star_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-mgh03/anat/{sub-mgh03_T2w_labels-disc-manual.json => sub-mgh03_space-other_T2w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-mgh03/anat/{sub-mgh03_T2w_labels-disc-manual.nii.gz => sub-mgh03_space-other_T2w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-mgh03/anat/{sub-mgh03_flip-1_mt-on_MTS_seg-manual.json => sub-mgh03_space-other_T2w_seg-manual.json} (100%) rename derivatives/labels/sub-mgh03/anat/{sub-mgh03_T2w_seg-manual.nii.gz => sub-mgh03_space-other_T2w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-mgh04/anat/{sub-mgh04_T2star_seg-manual.json => sub-mgh04_flip-1_mt-on_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-mgh04/anat/{sub-mgh04_flip-1_mt-on_MTS_seg-manual.nii.gz => sub-mgh04_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-mgh04/anat/{sub-mgh04_flip-2_mt-off_MTS_seg-manual.json => sub-mgh04_flip-2_mt-off_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-mgh04/anat/{sub-mgh04_flip-2_mt-off_MTS_seg-manual.nii.gz => sub-mgh04_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-mgh04/anat/{sub-mgh04_T1w_labels-disc-manual.json => sub-mgh04_space-other_T1w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-mgh04/anat/{sub-mgh04_T1w_labels-disc-manual.nii.gz => sub-mgh04_space-other_T1w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-mgh04/anat/{sub-mgh04_T1w_seg-manual.json => sub-mgh04_space-other_T1w_seg-manual.json} (100%) rename derivatives/labels/sub-mgh04/anat/{sub-mgh04_T1w_seg-manual.nii.gz => sub-mgh04_space-other_T1w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-mgh04/anat/{sub-mgh04_flip-1_mt-on_MTS_seg-manual.json => sub-mgh04_space-other_T2star_seg-manual.json} (100%) rename derivatives/labels/sub-mgh04/anat/{sub-mgh04_T2star_seg-manual.nii.gz => sub-mgh04_space-other_T2star_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-mgh04/anat/{sub-mgh04_T2w_labels-disc-manual.json => sub-mgh04_space-other_T2w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-mgh04/anat/{sub-mgh04_T2w_labels-disc-manual.nii.gz => sub-mgh04_space-other_T2w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-mgh04/anat/{sub-mgh04_T2w_seg-manual.json => sub-mgh04_space-other_T2w_seg-manual.json} (100%) rename derivatives/labels/sub-mgh04/anat/{sub-mgh04_T2w_seg-manual.nii.gz => sub-mgh04_space-other_T2w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-mgh05/anat/{sub-mgh05_flip-1_mt-on_MTS_seg-manual.json => sub-mgh05_flip-1_mt-on_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-mgh05/anat/{sub-mgh05_flip-1_mt-on_MTS_seg-manual.nii.gz => sub-mgh05_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-mgh05/anat/{sub-mgh05_flip-2_mt-off_MTS_seg-manual.json => sub-mgh05_flip-2_mt-off_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-mgh05/anat/{sub-mgh05_flip-2_mt-off_MTS_seg-manual.nii.gz => sub-mgh05_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-mgh05/anat/{sub-mgh05_T1w_RPI_r_labels-manual.nii.gz => sub-mgh05_space-other_T1w_RPI_r_labels-manual.nii.gz} (100%) rename derivatives/labels/sub-mgh05/anat/{sub-mgh05_T1w_labels-disc-manual.json => sub-mgh05_space-other_T1w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-mgh05/anat/{sub-mgh05_T1w_labels-disc-manual.nii.gz => sub-mgh05_space-other_T1w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-mgh05/anat/{sub-mgh05_T1w_seg-manual.json => sub-mgh05_space-other_T1w_seg-manual.json} (100%) rename derivatives/labels/sub-mgh05/anat/{sub-mgh05_T1w_seg-manual.nii.gz => sub-mgh05_space-other_T1w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-mgh05/anat/{sub-mgh05_T2star_seg-manual.json => sub-mgh05_space-other_T2star_seg-manual.json} (100%) rename derivatives/labels/sub-mgh05/anat/{sub-mgh05_T2star_seg-manual.nii.gz => sub-mgh05_space-other_T2star_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-mgh05/anat/{sub-mgh05_T2w_labels-disc-manual.json => sub-mgh05_space-other_T2w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-mgh05/anat/{sub-mgh05_T2w_labels-disc-manual.nii.gz => sub-mgh05_space-other_T2w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-mgh05/anat/{sub-mgh05_T2w_seg-manual.json => sub-mgh05_space-other_T2w_seg-manual.json} (100%) rename derivatives/labels/sub-mgh05/anat/{sub-mgh05_T2w_seg-manual.nii.gz => sub-mgh05_space-other_T2w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-mgh06/anat/{sub-mgh06_flip-1_mt-on_MTS_seg-manual.json => sub-mgh06_flip-1_mt-on_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-mgh06/anat/{sub-mgh06_flip-1_mt-on_MTS_seg-manual.nii.gz => sub-mgh06_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-mgh06/anat/{sub-mgh06_flip-2_mt-off_MTS_seg-manual.json => sub-mgh06_flip-2_mt-off_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-mgh06/anat/{sub-mgh06_flip-2_mt-off_MTS_seg-manual.nii.gz => sub-mgh06_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-mgh06/anat/{sub-mgh06_T1w_labels-disc-manual.json => sub-mgh06_space-other_T1w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-mgh06/anat/{sub-mgh06_T1w_labels-disc-manual.nii.gz => sub-mgh06_space-other_T1w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-mgh06/anat/{sub-mgh06_T1w_seg-manual.json => sub-mgh06_space-other_T1w_seg-manual.json} (100%) rename derivatives/labels/sub-mgh06/anat/{sub-mgh06_T1w_seg-manual.nii.gz => sub-mgh06_space-other_T1w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-mgh06/anat/{sub-mgh06_T2star_seg-manual.json => sub-mgh06_space-other_T2star_seg-manual.json} (100%) rename derivatives/labels/sub-mgh06/anat/{sub-mgh06_T2star_seg-manual.nii.gz => sub-mgh06_space-other_T2star_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-mgh06/anat/{sub-mgh06_T2w_labels-disc-manual.json => sub-mgh06_space-other_T2w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-mgh06/anat/{sub-mgh06_T2w_labels-disc-manual.nii.gz => sub-mgh06_space-other_T2w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-mgh06/anat/{sub-mgh06_T2w_seg-manual.json => sub-mgh06_space-other_T2w_seg-manual.json} (100%) rename derivatives/labels/sub-mgh06/anat/{sub-mgh06_T2w_seg-manual.nii.gz => sub-mgh06_space-other_T2w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-milan01/anat/{sub-milan01_T2star_seg-manual.json => sub-milan01_flip-1_mt-on_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-milan01/anat/{sub-milan01_flip-1_mt-on_MTS_seg-manual.nii.gz => sub-milan01_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-milan01/anat/{sub-milan01_flip-2_mt-off_MTS_seg-manual.json => sub-milan01_flip-2_mt-off_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-milan01/anat/{sub-milan01_flip-2_mt-off_MTS_seg-manual.nii.gz => sub-milan01_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-milan01/anat/{sub-milan01_T1w_RPI_r_labels-manual.nii.gz => sub-milan01_space-other_T1w_RPI_r_labels-manual.nii.gz} (100%) rename derivatives/labels/sub-milan01/anat/{sub-milan01_T1w_labels-disc-manual.json => sub-milan01_space-other_T1w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-milan01/anat/{sub-milan01_T1w_labels-disc-manual.nii.gz => sub-milan01_space-other_T1w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-milan01/anat/{sub-milan01_T1w_seg-manual.json => sub-milan01_space-other_T1w_seg-manual.json} (100%) rename derivatives/labels/sub-milan01/anat/{sub-milan01_T1w_seg-manual.nii.gz => sub-milan01_space-other_T1w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-milan01/anat/{sub-milan01_flip-1_mt-on_MTS_seg-manual.json => sub-milan01_space-other_T2star_seg-manual.json} (100%) rename derivatives/labels/sub-milan01/anat/{sub-milan01_T2star_seg-manual.nii.gz => sub-milan01_space-other_T2star_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-milan01/anat/{sub-milan01_T2w_labels-disc-manual.json => sub-milan01_space-other_T2w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-milan01/anat/{sub-milan01_T2w_labels-disc-manual.nii.gz => sub-milan01_space-other_T2w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-milan01/anat/{sub-milan01_T2w_seg-manual.json => sub-milan01_space-other_T2w_seg-manual.json} (100%) rename derivatives/labels/sub-milan01/anat/{sub-milan01_T2w_seg-manual.nii.gz => sub-milan01_space-other_T2w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-milan02/anat/{sub-milan02_T1w_seg-manual.json => sub-milan02_flip-1_mt-on_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-milan02/anat/{sub-milan02_flip-1_mt-on_MTS_seg-manual.nii.gz => sub-milan02_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-milan02/anat/{sub-milan02_T2star_seg-manual.json => sub-milan02_flip-2_mt-off_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-milan02/anat/{sub-milan02_flip-2_mt-off_MTS_seg-manual.nii.gz => sub-milan02_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-milan02/anat/{sub-milan02_T1w_labels-disc-manual.json => sub-milan02_space-other_T1w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-milan02/anat/{sub-milan02_T1w_labels-disc-manual.nii.gz => sub-milan02_space-other_T1w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-milan02/anat/{sub-milan02_T2w_seg-manual.json => sub-milan02_space-other_T1w_seg-manual.json} (100%) rename derivatives/labels/sub-milan02/anat/{sub-milan02_T1w_seg-manual.nii.gz => sub-milan02_space-other_T1w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-milan02/anat/{sub-milan02_flip-1_mt-on_MTS_seg-manual.json => sub-milan02_space-other_T2star_seg-manual.json} (100%) rename derivatives/labels/sub-milan02/anat/{sub-milan02_T2star_seg-manual.nii.gz => sub-milan02_space-other_T2star_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-milan02/anat/{sub-milan02_T2w_labels-disc-manual.json => sub-milan02_space-other_T2w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-milan02/anat/{sub-milan02_T2w_labels-disc-manual.nii.gz => sub-milan02_space-other_T2w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-milan02/anat/{sub-milan02_flip-2_mt-off_MTS_seg-manual.json => sub-milan02_space-other_T2w_seg-manual.json} (100%) rename derivatives/labels/sub-milan02/anat/{sub-milan02_T2w_seg-manual.nii.gz => sub-milan02_space-other_T2w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-milan03/anat/{sub-milan03_T2star_seg-manual.json => sub-milan03_flip-1_mt-on_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-milan03/anat/{sub-milan03_flip-1_mt-on_MTS_seg-manual.nii.gz => sub-milan03_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-milan03/anat/{sub-milan03_flip-2_mt-off_MTS_seg-manual.json => sub-milan03_flip-2_mt-off_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-milan03/anat/{sub-milan03_flip-2_mt-off_MTS_seg-manual.nii.gz => sub-milan03_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-milan03/anat/{sub-milan03_T1w_labels-disc-manual.json => sub-milan03_space-other_T1w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-milan03/anat/{sub-milan03_T1w_labels-disc-manual.nii.gz => sub-milan03_space-other_T1w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-milan03/anat/{sub-milan03_T1w_seg-manual.json => sub-milan03_space-other_T1w_seg-manual.json} (100%) rename derivatives/labels/sub-milan03/anat/{sub-milan03_T1w_seg-manual.nii.gz => sub-milan03_space-other_T1w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-milan03/anat/{sub-milan03_flip-1_mt-on_MTS_seg-manual.json => sub-milan03_space-other_T2star_seg-manual.json} (100%) rename derivatives/labels/sub-milan03/anat/{sub-milan03_T2star_seg-manual.nii.gz => sub-milan03_space-other_T2star_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-milan03/anat/{sub-milan03_T2w_labels-disc-manual.json => sub-milan03_space-other_T2w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-milan03/anat/{sub-milan03_T2w_labels-disc-manual.nii.gz => sub-milan03_space-other_T2w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-milan03/anat/{sub-milan03_T2w_seg-manual.json => sub-milan03_space-other_T2w_seg-manual.json} (100%) rename derivatives/labels/sub-milan03/anat/{sub-milan03_T2w_seg-manual.nii.gz => sub-milan03_space-other_T2w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-milan04/anat/{sub-milan04_flip-1_mt-on_MTS_seg-manual.json => sub-milan04_flip-1_mt-on_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-milan04/anat/{sub-milan04_flip-1_mt-on_MTS_seg-manual.nii.gz => sub-milan04_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-milan04/anat/{sub-milan04_flip-2_mt-off_MTS_seg-manual.json => sub-milan04_flip-2_mt-off_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-milan04/anat/{sub-milan04_flip-2_mt-off_MTS_seg-manual.nii.gz => sub-milan04_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-milan04/anat/{sub-milan04_T1w_labels-disc-manual.json => sub-milan04_space-other_T1w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-milan04/anat/{sub-milan04_T1w_labels-disc-manual.nii.gz => sub-milan04_space-other_T1w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-milan04/anat/{sub-milan04_T1w_seg-manual.json => sub-milan04_space-other_T1w_seg-manual.json} (100%) rename derivatives/labels/sub-milan04/anat/{sub-milan04_T1w_seg-manual.nii.gz => sub-milan04_space-other_T1w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-milan04/anat/{sub-milan04_T2star_seg-manual.json => sub-milan04_space-other_T2star_seg-manual.json} (100%) rename derivatives/labels/sub-milan04/anat/{sub-milan04_T2star_seg-manual.nii.gz => sub-milan04_space-other_T2star_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-milan04/anat/{sub-milan04_T2w_labels-disc-manual.json => sub-milan04_space-other_T2w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-milan04/anat/{sub-milan04_T2w_labels-disc-manual.nii.gz => sub-milan04_space-other_T2w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-milan04/anat/{sub-milan04_T2w_seg-manual.json => sub-milan04_space-other_T2w_seg-manual.json} (100%) rename derivatives/labels/sub-milan04/anat/{sub-milan04_T2w_seg-manual.nii.gz => sub-milan04_space-other_T2w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-milan05/anat/{sub-milan05_flip-1_mt-on_MTS_seg-manual.json => sub-milan05_flip-1_mt-on_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-milan05/anat/{sub-milan05_flip-1_mt-on_MTS_seg-manual.nii.gz => sub-milan05_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-milan05/anat/{sub-milan05_flip-2_mt-off_MTS_seg-manual.json => sub-milan05_flip-2_mt-off_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-milan05/anat/{sub-milan05_flip-2_mt-off_MTS_seg-manual.nii.gz => sub-milan05_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-milan05/anat/{sub-milan05_T1w_labels-disc-manual.json => sub-milan05_space-other_T1w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-milan05/anat/{sub-milan05_T1w_labels-disc-manual.nii.gz => sub-milan05_space-other_T1w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-milan05/anat/{sub-milan05_T1w_seg-manual.json => sub-milan05_space-other_T1w_seg-manual.json} (100%) rename derivatives/labels/sub-milan05/anat/{sub-milan05_T1w_seg-manual.nii.gz => sub-milan05_space-other_T1w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-milan05/anat/{sub-milan05_T2star_seg-manual.json => sub-milan05_space-other_T2star_seg-manual.json} (100%) rename derivatives/labels/sub-milan05/anat/{sub-milan05_T2star_seg-manual.nii.gz => sub-milan05_space-other_T2star_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-milan05/anat/{sub-milan05_T2w_labels-disc-manual.json => sub-milan05_space-other_T2w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-milan05/anat/{sub-milan05_T2w_labels-disc-manual.nii.gz => sub-milan05_space-other_T2w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-milan05/anat/{sub-milan05_T2w_seg-manual.json => sub-milan05_space-other_T2w_seg-manual.json} (100%) rename derivatives/labels/sub-milan05/anat/{sub-milan05_T2w_seg-manual.nii.gz => sub-milan05_space-other_T2w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-milan06/anat/{sub-milan06_flip-1_mt-on_MTS_seg-manual.json => sub-milan06_flip-1_mt-on_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-milan06/anat/{sub-milan06_flip-1_mt-on_MTS_seg-manual.nii.gz => sub-milan06_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-milan06/anat/{sub-milan06_T2star_seg-manual.json => sub-milan06_flip-2_mt-off_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-milan06/anat/{sub-milan06_flip-2_mt-off_MTS_seg-manual.nii.gz => sub-milan06_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-milan06/anat/{sub-milan06_T1w_labels-disc-manual.json => sub-milan06_space-other_T1w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-milan06/anat/{sub-milan06_T1w_labels-disc-manual.nii.gz => sub-milan06_space-other_T1w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-milan06/anat/{sub-milan06_T1w_seg-manual.json => sub-milan06_space-other_T1w_seg-manual.json} (100%) rename derivatives/labels/sub-milan06/anat/{sub-milan06_T1w_seg-manual.nii.gz => sub-milan06_space-other_T1w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-milan06/anat/{sub-milan06_flip-2_mt-off_MTS_seg-manual.json => sub-milan06_space-other_T2star_seg-manual.json} (100%) rename derivatives/labels/sub-milan06/anat/{sub-milan06_T2star_seg-manual.nii.gz => sub-milan06_space-other_T2star_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-milan06/anat/{sub-milan06_T2w_labels-disc-manual.json => sub-milan06_space-other_T2w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-milan06/anat/{sub-milan06_T2w_labels-disc-manual.nii.gz => sub-milan06_space-other_T2w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-milan06/anat/{sub-milan06_T2w_seg-manual.json => sub-milan06_space-other_T2w_seg-manual.json} (100%) rename derivatives/labels/sub-milan06/anat/{sub-milan06_T2w_seg-manual.nii.gz => sub-milan06_space-other_T2w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-milan07/anat/{sub-milan07_T2star_seg-manual.json => sub-milan07_flip-1_mt-on_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-milan07/anat/{sub-milan07_flip-1_mt-on_MTS_seg-manual.nii.gz => sub-milan07_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-milan07/anat/{sub-milan07_T2w_seg-manual.json => sub-milan07_flip-2_mt-off_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-milan07/anat/{sub-milan07_flip-2_mt-off_MTS_seg-manual.nii.gz => sub-milan07_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-milan07/anat/{sub-milan07_T1w_labels-disc-manual.json => sub-milan07_space-other_T1w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-milan07/anat/{sub-milan07_T1w_labels-disc-manual.nii.gz => sub-milan07_space-other_T1w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-milan07/anat/{sub-milan07_T1w_seg-manual.json => sub-milan07_space-other_T1w_seg-manual.json} (100%) rename derivatives/labels/sub-milan07/anat/{sub-milan07_T1w_seg-manual.nii.gz => sub-milan07_space-other_T1w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-milan07/anat/{sub-milan07_flip-1_mt-on_MTS_seg-manual.json => sub-milan07_space-other_T2star_seg-manual.json} (100%) rename derivatives/labels/sub-milan07/anat/{sub-milan07_T2star_seg-manual.nii.gz => sub-milan07_space-other_T2star_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-milan07/anat/{sub-milan07_T2w_labels-disc-manual.json => sub-milan07_space-other_T2w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-milan07/anat/{sub-milan07_T2w_labels-disc-manual.nii.gz => sub-milan07_space-other_T2w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-milan07/anat/{sub-milan07_flip-2_mt-off_MTS_seg-manual.json => sub-milan07_space-other_T2w_seg-manual.json} (100%) rename derivatives/labels/sub-milan07/anat/{sub-milan07_T2w_seg-manual.nii.gz => sub-milan07_space-other_T2w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-mniPilot1/anat/{sub-mniPilot1_T2star_seg-manual.json => sub-mniPilot1_flip-1_mt-on_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-mniPilot1/anat/{sub-mniPilot1_flip-1_mt-on_MTS_seg-manual.nii.gz => sub-mniPilot1_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-mniPilot1/anat/{sub-mniPilot1_flip-2_mt-off_MTS_seg-manual.json => sub-mniPilot1_flip-2_mt-off_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-mniPilot1/anat/{sub-mniPilot1_flip-2_mt-off_MTS_seg-manual.nii.gz => sub-mniPilot1_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-mniPilot1/anat/{sub-mniPilot1_T1w_RPI_r_labels-manual.nii.gz => sub-mniPilot1_space-other_T1w_RPI_r_labels-manual.nii.gz} (100%) rename derivatives/labels/sub-mniPilot1/anat/{sub-mniPilot1_T1w_labels-disc-manual.json => sub-mniPilot1_space-other_T1w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-mniPilot1/anat/{sub-mniPilot1_T1w_labels-disc-manual.nii.gz => sub-mniPilot1_space-other_T1w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-mniPilot1/anat/{sub-mniPilot1_T1w_seg-manual.json => sub-mniPilot1_space-other_T1w_seg-manual.json} (100%) rename derivatives/labels/sub-mniPilot1/anat/{sub-mniPilot1_T1w_seg-manual.nii.gz => sub-mniPilot1_space-other_T1w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-mniPilot1/anat/{sub-mniPilot1_T2w_seg-manual.json => sub-mniPilot1_space-other_T2star_seg-manual.json} (100%) rename derivatives/labels/sub-mniPilot1/anat/{sub-mniPilot1_T2star_seg-manual.nii.gz => sub-mniPilot1_space-other_T2star_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-mniPilot1/anat/{sub-mniPilot1_T2w_labels-disc-manual.json => sub-mniPilot1_space-other_T2w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-mniPilot1/anat/{sub-mniPilot1_T2w_labels-disc-manual.nii.gz => sub-mniPilot1_space-other_T2w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-mniPilot1/anat/{sub-mniPilot1_flip-1_mt-on_MTS_seg-manual.json => sub-mniPilot1_space-other_T2w_seg-manual.json} (100%) rename derivatives/labels/sub-mniPilot1/anat/{sub-mniPilot1_T2w_seg-manual.nii.gz => sub-mniPilot1_space-other_T2w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-mniS01/anat/{sub-mniS01_flip-1_mt-on_MTS_seg-manual.json => sub-mniS01_flip-1_mt-on_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-mniS01/anat/{sub-mniS01_flip-1_mt-on_MTS_seg-manual.nii.gz => sub-mniS01_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-mniS01/anat/{sub-mniS01_flip-2_mt-off_MTS_seg-manual.json => sub-mniS01_flip-2_mt-off_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-mniS01/anat/{sub-mniS01_flip-2_mt-off_MTS_seg-manual.nii.gz => sub-mniS01_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-mniS01/anat/{sub-mniS01_T1w_labels-disc-manual.json => sub-mniS01_space-other_T1w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-mniS01/anat/{sub-mniS01_T1w_labels-disc-manual.nii.gz => sub-mniS01_space-other_T1w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-mniS01/anat/{sub-mniS01_T1w_seg-manual.json => sub-mniS01_space-other_T1w_seg-manual.json} (100%) rename derivatives/labels/sub-mniS01/anat/{sub-mniS01_T1w_seg-manual.nii.gz => sub-mniS01_space-other_T1w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-mniS01/anat/{sub-mniS01_T2star_seg-manual.json => sub-mniS01_space-other_T2star_seg-manual.json} (100%) rename derivatives/labels/sub-mniS01/anat/{sub-mniS01_T2star_seg-manual.nii.gz => sub-mniS01_space-other_T2star_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-mniS01/anat/{sub-mniS01_T2w_labels-disc-manual.json => sub-mniS01_space-other_T2w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-mniS01/anat/{sub-mniS01_T2w_labels-disc-manual.nii.gz => sub-mniS01_space-other_T2w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-mniS01/anat/{sub-mniS01_T2w_seg-manual.json => sub-mniS01_space-other_T2w_seg-manual.json} (100%) rename derivatives/labels/sub-mniS01/anat/{sub-mniS01_T2w_seg-manual.nii.gz => sub-mniS01_space-other_T2w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-mniS02/anat/{sub-mniS02_T1w_seg-manual.json => sub-mniS02_flip-1_mt-on_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-mniS02/anat/{sub-mniS02_flip-1_mt-on_MTS_seg-manual.nii.gz => sub-mniS02_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-mniS02/anat/{sub-mniS02_T2star_seg-manual.json => sub-mniS02_flip-2_mt-off_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-mniS02/anat/{sub-mniS02_flip-2_mt-off_MTS_seg-manual.nii.gz => sub-mniS02_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-mniS02/anat/{sub-mniS02_T1w_labels-disc-manual.json => sub-mniS02_space-other_T1w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-mniS02/anat/{sub-mniS02_T1w_labels-disc-manual.nii.gz => sub-mniS02_space-other_T1w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-mniS02/anat/{sub-mniS02_T2w_seg-manual.json => sub-mniS02_space-other_T1w_seg-manual.json} (100%) rename derivatives/labels/sub-mniS02/anat/{sub-mniS02_T1w_seg-manual.nii.gz => sub-mniS02_space-other_T1w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-mniS02/anat/{sub-mniS02_flip-1_mt-on_MTS_seg-manual.json => sub-mniS02_space-other_T2star_seg-manual.json} (100%) rename derivatives/labels/sub-mniS02/anat/{sub-mniS02_T2star_seg-manual.nii.gz => sub-mniS02_space-other_T2star_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-mniS02/anat/{sub-mniS02_T2w_labels-disc-manual.json => sub-mniS02_space-other_T2w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-mniS02/anat/{sub-mniS02_T2w_labels-disc-manual.nii.gz => sub-mniS02_space-other_T2w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-mniS02/anat/{sub-mniS02_flip-2_mt-off_MTS_seg-manual.json => sub-mniS02_space-other_T2w_seg-manual.json} (100%) rename derivatives/labels/sub-mniS02/anat/{sub-mniS02_T2w_seg-manual.nii.gz => sub-mniS02_space-other_T2w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-mniS03/anat/{sub-mniS03_T2star_seg-manual.json => sub-mniS03_flip-1_mt-on_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-mniS03/anat/{sub-mniS03_flip-1_mt-on_MTS_seg-manual.nii.gz => sub-mniS03_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-mniS03/anat/{sub-mniS03_flip-2_mt-off_MTS_seg-manual.json => sub-mniS03_flip-2_mt-off_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-mniS03/anat/{sub-mniS03_flip-2_mt-off_MTS_seg-manual.nii.gz => sub-mniS03_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-mniS03/anat/{sub-mniS03_T1w_labels-disc-manual.json => sub-mniS03_space-other_T1w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-mniS03/anat/{sub-mniS03_T1w_labels-disc-manual.nii.gz => sub-mniS03_space-other_T1w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-mniS03/anat/{sub-mniS03_T1w_seg-manual.json => sub-mniS03_space-other_T1w_seg-manual.json} (100%) rename derivatives/labels/sub-mniS03/anat/{sub-mniS03_T1w_seg-manual.nii.gz => sub-mniS03_space-other_T1w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-mniS03/anat/{sub-mniS03_T2w_seg-manual.json => sub-mniS03_space-other_T2star_seg-manual.json} (100%) rename derivatives/labels/sub-mniS03/anat/{sub-mniS03_T2star_seg-manual.nii.gz => sub-mniS03_space-other_T2star_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-mniS03/anat/{sub-mniS03_T2w_labels-disc-manual.json => sub-mniS03_space-other_T2w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-mniS03/anat/{sub-mniS03_T2w_labels-disc-manual.nii.gz => sub-mniS03_space-other_T2w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-mniS03/anat/{sub-mniS03_flip-1_mt-on_MTS_seg-manual.json => sub-mniS03_space-other_T2w_seg-manual.json} (100%) rename derivatives/labels/sub-mniS03/anat/{sub-mniS03_T2w_seg-manual.nii.gz => sub-mniS03_space-other_T2w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-mniS04/anat/{sub-mniS04_flip-1_mt-on_MTS_seg-manual.json => sub-mniS04_flip-1_mt-on_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-mniS04/anat/{sub-mniS04_flip-1_mt-on_MTS_seg-manual.nii.gz => sub-mniS04_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-mniS04/anat/{sub-mniS04_T2star_seg-manual.json => sub-mniS04_flip-2_mt-off_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-mniS04/anat/{sub-mniS04_flip-2_mt-off_MTS_seg-manual.nii.gz => sub-mniS04_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-mniS04/anat/{sub-mniS04_T1w_labels-disc-manual.json => sub-mniS04_space-other_T1w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-mniS04/anat/{sub-mniS04_T1w_labels-disc-manual.nii.gz => sub-mniS04_space-other_T1w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-mniS04/anat/{sub-mniS04_T1w_seg-manual.json => sub-mniS04_space-other_T1w_seg-manual.json} (100%) rename derivatives/labels/sub-mniS04/anat/{sub-mniS04_T1w_seg-manual.nii.gz => sub-mniS04_space-other_T1w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-mniS04/anat/{sub-mniS04_flip-2_mt-off_MTS_seg-manual.json => sub-mniS04_space-other_T2star_seg-manual.json} (100%) rename derivatives/labels/sub-mniS04/anat/{sub-mniS04_T2star_seg-manual.nii.gz => sub-mniS04_space-other_T2star_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-mniS04/anat/{sub-mniS04_T2w_labels-disc-manual.json => sub-mniS04_space-other_T2w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-mniS04/anat/{sub-mniS04_T2w_labels-disc-manual.nii.gz => sub-mniS04_space-other_T2w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-mniS04/anat/{sub-mniS04_T2w_seg-manual.json => sub-mniS04_space-other_T2w_seg-manual.json} (100%) rename derivatives/labels/sub-mniS04/anat/{sub-mniS04_T2w_seg-manual.nii.gz => sub-mniS04_space-other_T2w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-mniS05/anat/{sub-mniS05_flip-1_mt-on_MTS_seg-manual.json => sub-mniS05_flip-1_mt-on_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-mniS05/anat/{sub-mniS05_flip-1_mt-on_MTS_seg-manual.nii.gz => sub-mniS05_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-mniS05/anat/{sub-mniS05_flip-2_mt-off_MTS_seg-manual.json => sub-mniS05_flip-2_mt-off_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-mniS05/anat/{sub-mniS05_flip-2_mt-off_MTS_seg-manual.nii.gz => sub-mniS05_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-mniS05/anat/{sub-mniS05_T1w_labels-disc-manual.json => sub-mniS05_space-other_T1w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-mniS05/anat/{sub-mniS05_T1w_labels-disc-manual.nii.gz => sub-mniS05_space-other_T1w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-mniS05/anat/{sub-mniS05_T1w_seg-manual.json => sub-mniS05_space-other_T1w_seg-manual.json} (100%) rename derivatives/labels/sub-mniS05/anat/{sub-mniS05_T1w_seg-manual.nii.gz => sub-mniS05_space-other_T1w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-mniS05/anat/{sub-mniS05_T2star_gmseg-manual.json => sub-mniS05_space-other_T2star_gmseg-manual.json} (100%) rename derivatives/labels/sub-mniS05/anat/{sub-mniS05_T2star_gmseg-manual.nii.gz => sub-mniS05_space-other_T2star_gmseg-manual.nii.gz} (100%) rename derivatives/labels/sub-mniS05/anat/{sub-mniS05_T2star_seg-manual.json => sub-mniS05_space-other_T2star_seg-manual.json} (100%) rename derivatives/labels/sub-mniS05/anat/{sub-mniS05_T2star_seg-manual.nii.gz => sub-mniS05_space-other_T2star_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-mniS05/anat/{sub-mniS05_T2w_labels-disc-manual.json => sub-mniS05_space-other_T2w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-mniS05/anat/{sub-mniS05_T2w_labels-disc-manual.nii.gz => sub-mniS05_space-other_T2w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-mniS05/anat/{sub-mniS05_T2w_seg-manual.json => sub-mniS05_space-other_T2w_seg-manual.json} (100%) rename derivatives/labels/sub-mniS05/anat/{sub-mniS05_T2w_seg-manual.nii.gz => sub-mniS05_space-other_T2w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-mniS06/anat/{sub-mniS06_T2star_seg-manual.json => sub-mniS06_flip-1_mt-on_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-mniS06/anat/{sub-mniS06_flip-1_mt-on_MTS_seg-manual.nii.gz => sub-mniS06_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-mniS06/anat/{sub-mniS06_flip-2_mt-off_MTS_seg-manual.json => sub-mniS06_flip-2_mt-off_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-mniS06/anat/{sub-mniS06_flip-2_mt-off_MTS_seg-manual.nii.gz => sub-mniS06_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-mniS06/anat/{sub-mniS06_T1w_labels-disc-manual.json => sub-mniS06_space-other_T1w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-mniS06/anat/{sub-mniS06_T1w_labels-disc-manual.nii.gz => sub-mniS06_space-other_T1w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-mniS06/anat/{sub-mniS06_T1w_seg-manual.json => sub-mniS06_space-other_T1w_seg-manual.json} (100%) rename derivatives/labels/sub-mniS06/anat/{sub-mniS06_T1w_seg-manual.nii.gz => sub-mniS06_space-other_T1w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-mniS06/anat/{sub-mniS06_T2w_seg-manual.json => sub-mniS06_space-other_T2star_seg-manual.json} (100%) rename derivatives/labels/sub-mniS06/anat/{sub-mniS06_T2star_seg-manual.nii.gz => sub-mniS06_space-other_T2star_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-mniS06/anat/{sub-mniS06_T2w_labels-disc-manual.json => sub-mniS06_space-other_T2w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-mniS06/anat/{sub-mniS06_T2w_labels-disc-manual.nii.gz => sub-mniS06_space-other_T2w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-mniS06/anat/{sub-mniS06_flip-1_mt-on_MTS_seg-manual.json => sub-mniS06_space-other_T2w_seg-manual.json} (100%) rename derivatives/labels/sub-mniS06/anat/{sub-mniS06_T2w_seg-manual.nii.gz => sub-mniS06_space-other_T2w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-mniS07/anat/{sub-mniS07_T2star_seg-manual.json => sub-mniS07_flip-1_mt-on_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-mniS07/anat/{sub-mniS07_flip-1_mt-on_MTS_seg-manual.nii.gz => sub-mniS07_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-mniS07/anat/{sub-mniS07_flip-2_mt-off_MTS_seg-manual.json => sub-mniS07_flip-2_mt-off_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-mniS07/anat/{sub-mniS07_flip-2_mt-off_MTS_seg-manual.nii.gz => sub-mniS07_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-mniS07/anat/{sub-mniS07_T1w_labels-disc-manual.json => sub-mniS07_space-other_T1w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-mniS07/anat/{sub-mniS07_T1w_labels-disc-manual.nii.gz => sub-mniS07_space-other_T1w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-mniS07/anat/{sub-mniS07_T1w_seg-manual.json => sub-mniS07_space-other_T1w_seg-manual.json} (100%) rename derivatives/labels/sub-mniS07/anat/{sub-mniS07_T1w_seg-manual.nii.gz => sub-mniS07_space-other_T1w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-mniS07/anat/{sub-mniS07_flip-1_mt-on_MTS_seg-manual.json => sub-mniS07_space-other_T2star_seg-manual.json} (100%) rename derivatives/labels/sub-mniS07/anat/{sub-mniS07_T2star_seg-manual.nii.gz => sub-mniS07_space-other_T2star_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-mniS07/anat/{sub-mniS07_T2w_labels-disc-manual.json => sub-mniS07_space-other_T2w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-mniS07/anat/{sub-mniS07_T2w_labels-disc-manual.nii.gz => sub-mniS07_space-other_T2w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-mniS07/anat/{sub-mniS07_T2w_seg-manual.json => sub-mniS07_space-other_T2w_seg-manual.json} (100%) rename derivatives/labels/sub-mniS07/anat/{sub-mniS07_T2w_seg-manual.nii.gz => sub-mniS07_space-other_T2w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-mniS08/anat/{sub-mniS08_flip-1_mt-on_MTS_seg-manual.json => sub-mniS08_flip-1_mt-on_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-mniS08/anat/{sub-mniS08_flip-1_mt-on_MTS_seg-manual.nii.gz => sub-mniS08_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-mniS08/anat/{sub-mniS08_flip-2_mt-off_MTS_seg-manual.json => sub-mniS08_flip-2_mt-off_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-mniS08/anat/{sub-mniS08_flip-2_mt-off_MTS_seg-manual.nii.gz => sub-mniS08_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-mniS08/anat/{sub-mniS08_T1w_labels-disc-manual.json => sub-mniS08_space-other_T1w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-mniS08/anat/{sub-mniS08_T1w_labels-disc-manual.nii.gz => sub-mniS08_space-other_T1w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-mniS08/anat/{sub-mniS08_T1w_seg-manual.json => sub-mniS08_space-other_T1w_seg-manual.json} (100%) rename derivatives/labels/sub-mniS08/anat/{sub-mniS08_T1w_seg-manual.nii.gz => sub-mniS08_space-other_T1w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-mniS08/anat/{sub-mniS08_T2star_seg-manual.json => sub-mniS08_space-other_T2star_seg-manual.json} (100%) rename derivatives/labels/sub-mniS08/anat/{sub-mniS08_T2star_seg-manual.nii.gz => sub-mniS08_space-other_T2star_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-mniS08/anat/{sub-mniS08_T2w_labels-disc-manual.json => sub-mniS08_space-other_T2w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-mniS08/anat/{sub-mniS08_T2w_labels-disc-manual.nii.gz => sub-mniS08_space-other_T2w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-mniS08/anat/{sub-mniS08_T2w_seg-manual.json => sub-mniS08_space-other_T2w_seg-manual.json} (100%) rename derivatives/labels/sub-mniS08/anat/{sub-mniS08_T2w_seg-manual.nii.gz => sub-mniS08_space-other_T2w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-mniS09/anat/{sub-mniS09_T2star_seg-manual.json => sub-mniS09_flip-1_mt-on_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-mniS09/anat/{sub-mniS09_flip-1_mt-on_MTS_seg-manual.nii.gz => sub-mniS09_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-mniS09/anat/{sub-mniS09_flip-2_mt-off_MTS_seg-manual.json => sub-mniS09_flip-2_mt-off_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-mniS09/anat/{sub-mniS09_flip-2_mt-off_MTS_seg-manual.nii.gz => sub-mniS09_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-mniS09/anat/{sub-mniS09_T1w_labels-disc-manual.json => sub-mniS09_space-other_T1w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-mniS09/anat/{sub-mniS09_T1w_labels-disc-manual.nii.gz => sub-mniS09_space-other_T1w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-mniS09/anat/{sub-mniS09_T1w_seg-manual.json => sub-mniS09_space-other_T1w_seg-manual.json} (100%) rename derivatives/labels/sub-mniS09/anat/{sub-mniS09_T1w_seg-manual.nii.gz => sub-mniS09_space-other_T1w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-mniS09/anat/{sub-mniS09_flip-1_mt-on_MTS_seg-manual.json => sub-mniS09_space-other_T2star_seg-manual.json} (100%) rename derivatives/labels/sub-mniS09/anat/{sub-mniS09_T2star_seg-manual.nii.gz => sub-mniS09_space-other_T2star_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-mniS09/anat/{sub-mniS09_T2w_labels-disc-manual.json => sub-mniS09_space-other_T2w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-mniS09/anat/{sub-mniS09_T2w_labels-disc-manual.nii.gz => sub-mniS09_space-other_T2w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-mniS09/anat/{sub-mniS09_T2w_seg-manual.json => sub-mniS09_space-other_T2w_seg-manual.json} (100%) rename derivatives/labels/sub-mniS09/anat/{sub-mniS09_T2w_seg-manual.nii.gz => sub-mniS09_space-other_T2w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-mountSinai01/anat/{sub-mountSinai01_flip-1_mt-on_MTS_seg-manual.json => sub-mountSinai01_flip-1_mt-on_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-mountSinai01/anat/{sub-mountSinai01_flip-1_mt-on_MTS_seg-manual.nii.gz => sub-mountSinai01_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-mountSinai01/anat/{sub-mountSinai01_flip-2_mt-off_MTS_seg-manual.json => sub-mountSinai01_flip-2_mt-off_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-mountSinai01/anat/{sub-mountSinai01_flip-2_mt-off_MTS_seg-manual.nii.gz => sub-mountSinai01_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-mountSinai01/anat/{sub-mountSinai01_T1w_labels-disc-manual.json => sub-mountSinai01_space-other_T1w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-mountSinai01/anat/{sub-mountSinai01_T1w_labels-disc-manual.nii.gz => sub-mountSinai01_space-other_T1w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-mountSinai01/anat/{sub-mountSinai01_T1w_seg-manual.json => sub-mountSinai01_space-other_T1w_seg-manual.json} (100%) rename derivatives/labels/sub-mountSinai01/anat/{sub-mountSinai01_T1w_seg-manual.nii.gz => sub-mountSinai01_space-other_T1w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-mountSinai01/anat/{sub-mountSinai01_T2star_seg-manual.json => sub-mountSinai01_space-other_T2star_seg-manual.json} (100%) rename derivatives/labels/sub-mountSinai01/anat/{sub-mountSinai01_T2star_seg-manual.nii.gz => sub-mountSinai01_space-other_T2star_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-mountSinai01/anat/{sub-mountSinai01_T2w_labels-disc-manual.json => sub-mountSinai01_space-other_T2w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-mountSinai01/anat/{sub-mountSinai01_T2w_labels-disc-manual.nii.gz => sub-mountSinai01_space-other_T2w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-mountSinai01/anat/{sub-mountSinai01_T2w_seg-manual.json => sub-mountSinai01_space-other_T2w_seg-manual.json} (100%) rename derivatives/labels/sub-mountSinai01/anat/{sub-mountSinai01_T2w_seg-manual.nii.gz => sub-mountSinai01_space-other_T2w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-mountSinai02/anat/{sub-mountSinai02_T2star_seg-manual.json => sub-mountSinai02_flip-1_mt-on_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-mountSinai02/anat/{sub-mountSinai02_flip-1_mt-on_MTS_seg-manual.nii.gz => sub-mountSinai02_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-mountSinai02/anat/{sub-mountSinai02_flip-2_mt-off_MTS_seg-manual.json => sub-mountSinai02_flip-2_mt-off_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-mountSinai02/anat/{sub-mountSinai02_flip-2_mt-off_MTS_seg-manual.nii.gz => sub-mountSinai02_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-mountSinai02/anat/{sub-mountSinai02_T1w_labels-disc-manual.json => sub-mountSinai02_space-other_T1w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-mountSinai02/anat/{sub-mountSinai02_T1w_labels-disc-manual.nii.gz => sub-mountSinai02_space-other_T1w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-mountSinai02/anat/{sub-mountSinai02_T1w_seg-manual.json => sub-mountSinai02_space-other_T1w_seg-manual.json} (100%) rename derivatives/labels/sub-mountSinai02/anat/{sub-mountSinai02_T1w_seg-manual.nii.gz => sub-mountSinai02_space-other_T1w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-mountSinai02/anat/{sub-mountSinai02_T2w_seg-manual.json => sub-mountSinai02_space-other_T2star_seg-manual.json} (100%) rename derivatives/labels/sub-mountSinai02/anat/{sub-mountSinai02_T2star_seg-manual.nii.gz => sub-mountSinai02_space-other_T2star_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-mountSinai02/anat/{sub-mountSinai02_T2w_labels-disc-manual.json => sub-mountSinai02_space-other_T2w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-mountSinai02/anat/{sub-mountSinai02_T2w_labels-disc-manual.nii.gz => sub-mountSinai02_space-other_T2w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-mountSinai02/anat/{sub-mountSinai02_flip-1_mt-on_MTS_seg-manual.json => sub-mountSinai02_space-other_T2w_seg-manual.json} (100%) rename derivatives/labels/sub-mountSinai02/anat/{sub-mountSinai02_T2w_seg-manual.nii.gz => sub-mountSinai02_space-other_T2w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-mountSinai03/anat/{sub-mountSinai03_T2star_seg-manual.json => sub-mountSinai03_flip-1_mt-on_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-mountSinai03/anat/{sub-mountSinai03_flip-1_mt-on_MTS_seg-manual.nii.gz => sub-mountSinai03_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-mountSinai03/anat/{sub-mountSinai03_flip-1_mt-on_MTS_seg-manual.json => sub-mountSinai03_flip-2_mt-off_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-mountSinai03/anat/{sub-mountSinai03_flip-2_mt-off_MTS_seg-manual.nii.gz => sub-mountSinai03_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-mountSinai03/anat/{sub-mountSinai03_T1w_labels-disc-manual.json => sub-mountSinai03_space-other_T1w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-mountSinai03/anat/{sub-mountSinai03_T1w_labels-disc-manual.nii.gz => sub-mountSinai03_space-other_T1w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-mountSinai03/anat/{sub-mountSinai03_T1w_seg-manual.json => sub-mountSinai03_space-other_T1w_seg-manual.json} (100%) rename derivatives/labels/sub-mountSinai03/anat/{sub-mountSinai03_T1w_seg-manual.nii.gz => sub-mountSinai03_space-other_T1w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-mountSinai03/anat/{sub-mountSinai03_flip-2_mt-off_MTS_seg-manual.json => sub-mountSinai03_space-other_T2star_seg-manual.json} (100%) rename derivatives/labels/sub-mountSinai03/anat/{sub-mountSinai03_T2star_seg-manual.nii.gz => sub-mountSinai03_space-other_T2star_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-mountSinai03/anat/{sub-mountSinai03_T2w_labels-disc-manual.json => sub-mountSinai03_space-other_T2w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-mountSinai03/anat/{sub-mountSinai03_T2w_labels-disc-manual.nii.gz => sub-mountSinai03_space-other_T2w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-mountSinai03/anat/{sub-mountSinai03_T2w_seg-manual.json => sub-mountSinai03_space-other_T2w_seg-manual.json} (100%) rename derivatives/labels/sub-mountSinai03/anat/{sub-mountSinai03_T2w_seg-manual.nii.gz => sub-mountSinai03_space-other_T2w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-mountSinai04/anat/{sub-mountSinai04_flip-1_mt-on_MTS_seg-manual.json => sub-mountSinai04_flip-1_mt-on_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-mountSinai04/anat/{sub-mountSinai04_flip-1_mt-on_MTS_seg-manual.nii.gz => sub-mountSinai04_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-mountSinai04/anat/{sub-mountSinai04_flip-2_mt-off_MTS_seg-manual.json => sub-mountSinai04_flip-2_mt-off_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-mountSinai04/anat/{sub-mountSinai04_flip-2_mt-off_MTS_seg-manual.nii.gz => sub-mountSinai04_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-mountSinai04/anat/{sub-mountSinai04_T1w_labels-disc-manual.json => sub-mountSinai04_space-other_T1w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-mountSinai04/anat/{sub-mountSinai04_T1w_labels-disc-manual.nii.gz => sub-mountSinai04_space-other_T1w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-mountSinai04/anat/{sub-mountSinai04_T1w_seg-manual.json => sub-mountSinai04_space-other_T1w_seg-manual.json} (100%) rename derivatives/labels/sub-mountSinai04/anat/{sub-mountSinai04_T1w_seg-manual.nii.gz => sub-mountSinai04_space-other_T1w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-mountSinai04/anat/{sub-mountSinai04_T2star_seg-manual.json => sub-mountSinai04_space-other_T2star_seg-manual.json} (100%) rename derivatives/labels/sub-mountSinai04/anat/{sub-mountSinai04_T2star_seg-manual.nii.gz => sub-mountSinai04_space-other_T2star_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-mountSinai04/anat/{sub-mountSinai04_T2w_labels-disc-manual.json => sub-mountSinai04_space-other_T2w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-mountSinai04/anat/{sub-mountSinai04_T2w_labels-disc-manual.nii.gz => sub-mountSinai04_space-other_T2w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-mountSinai04/anat/{sub-mountSinai04_T2w_seg-manual.json => sub-mountSinai04_space-other_T2w_seg-manual.json} (100%) rename derivatives/labels/sub-mountSinai04/anat/{sub-mountSinai04_T2w_seg-manual.nii.gz => sub-mountSinai04_space-other_T2w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-mountSinai05/anat/{sub-mountSinai05_flip-1_mt-on_MTS_seg-manual.json => sub-mountSinai05_flip-1_mt-on_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-mountSinai05/anat/{sub-mountSinai05_flip-1_mt-on_MTS_seg-manual.nii.gz => sub-mountSinai05_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-mountSinai05/anat/{sub-mountSinai05_flip-2_mt-off_MTS_seg-manual.json => sub-mountSinai05_flip-2_mt-off_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-mountSinai05/anat/{sub-mountSinai05_flip-2_mt-off_MTS_seg-manual.nii.gz => sub-mountSinai05_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-mountSinai05/anat/{sub-mountSinai05_T1w_labels-disc-manual.json => sub-mountSinai05_space-other_T1w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-mountSinai05/anat/{sub-mountSinai05_T1w_labels-disc-manual.nii.gz => sub-mountSinai05_space-other_T1w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-mountSinai05/anat/{sub-mountSinai05_T1w_seg-manual.json => sub-mountSinai05_space-other_T1w_seg-manual.json} (100%) rename derivatives/labels/sub-mountSinai05/anat/{sub-mountSinai05_T1w_seg-manual.nii.gz => sub-mountSinai05_space-other_T1w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-mountSinai05/anat/{sub-mountSinai05_T2star_seg-manual.json => sub-mountSinai05_space-other_T2star_seg-manual.json} (100%) rename derivatives/labels/sub-mountSinai05/anat/{sub-mountSinai05_T2star_seg-manual.nii.gz => sub-mountSinai05_space-other_T2star_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-mountSinai05/anat/{sub-mountSinai05_T2w_labels-disc-manual.json => sub-mountSinai05_space-other_T2w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-mountSinai05/anat/{sub-mountSinai05_T2w_labels-disc-manual.nii.gz => sub-mountSinai05_space-other_T2w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-mountSinai05/anat/{sub-mountSinai05_T2w_seg-manual.json => sub-mountSinai05_space-other_T2w_seg-manual.json} (100%) rename derivatives/labels/sub-mountSinai05/anat/{sub-mountSinai05_T2w_seg-manual.nii.gz => sub-mountSinai05_space-other_T2w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-mountSinai06/anat/{sub-mountSinai06_flip-1_mt-on_MTS_seg-manual.json => sub-mountSinai06_flip-1_mt-on_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-mountSinai06/anat/{sub-mountSinai06_flip-1_mt-on_MTS_seg-manual.nii.gz => sub-mountSinai06_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-mountSinai06/anat/{sub-mountSinai06_T2star_seg-manual.json => sub-mountSinai06_flip-2_mt-off_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-mountSinai06/anat/{sub-mountSinai06_flip-2_mt-off_MTS_seg-manual.nii.gz => sub-mountSinai06_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-mountSinai06/anat/{sub-mountSinai06_T1w_labels-disc-manual.json => sub-mountSinai06_space-other_T1w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-mountSinai06/anat/{sub-mountSinai06_T1w_labels-disc-manual.nii.gz => sub-mountSinai06_space-other_T1w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-mountSinai06/anat/{sub-mountSinai06_T1w_seg-manual.json => sub-mountSinai06_space-other_T1w_seg-manual.json} (100%) rename derivatives/labels/sub-mountSinai06/anat/{sub-mountSinai06_T1w_seg-manual.nii.gz => sub-mountSinai06_space-other_T1w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-mountSinai06/anat/{sub-mountSinai06_flip-2_mt-off_MTS_seg-manual.json => sub-mountSinai06_space-other_T2star_seg-manual.json} (100%) rename derivatives/labels/sub-mountSinai06/anat/{sub-mountSinai06_T2star_seg-manual.nii.gz => sub-mountSinai06_space-other_T2star_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-mountSinai06/anat/{sub-mountSinai06_T2w_labels-disc-manual.json => sub-mountSinai06_space-other_T2w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-mountSinai06/anat/{sub-mountSinai06_T2w_labels-disc-manual.nii.gz => sub-mountSinai06_space-other_T2w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-mountSinai06/anat/{sub-mountSinai06_T2w_seg-manual.json => sub-mountSinai06_space-other_T2w_seg-manual.json} (100%) rename derivatives/labels/sub-mountSinai06/anat/{sub-mountSinai06_T2w_seg-manual.nii.gz => sub-mountSinai06_space-other_T2w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-mpicbs01/anat/{sub-mpicbs01_T2star_seg-manual.json => sub-mpicbs01_flip-1_mt-on_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-mpicbs01/anat/{sub-mpicbs01_flip-1_mt-on_MTS_seg-manual.nii.gz => sub-mpicbs01_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-mpicbs01/anat/{sub-mpicbs01_flip-2_mt-off_MTS_seg-manual.json => sub-mpicbs01_flip-2_mt-off_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-mpicbs01/anat/{sub-mpicbs01_flip-2_mt-off_MTS_seg-manual.nii.gz => sub-mpicbs01_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-mpicbs01/anat/{sub-mpicbs01_T1w_RPI_r_labels-manual.nii.gz => sub-mpicbs01_space-other_T1w_RPI_r_labels-manual.nii.gz} (100%) rename derivatives/labels/sub-mpicbs01/anat/{sub-mpicbs01_T1w_labels-disc-manual.json => sub-mpicbs01_space-other_T1w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-mpicbs01/anat/{sub-mpicbs01_T1w_labels-disc-manual.nii.gz => sub-mpicbs01_space-other_T1w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-mpicbs01/anat/{sub-mpicbs01_T1w_seg-manual.json => sub-mpicbs01_space-other_T1w_seg-manual.json} (100%) rename derivatives/labels/sub-mpicbs01/anat/{sub-mpicbs01_T1w_seg-manual.nii.gz => sub-mpicbs01_space-other_T1w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-mpicbs01/anat/{sub-mpicbs01_T2w_seg-manual.json => sub-mpicbs01_space-other_T2star_seg-manual.json} (100%) rename derivatives/labels/sub-mpicbs01/anat/{sub-mpicbs01_T2star_seg-manual.nii.gz => sub-mpicbs01_space-other_T2star_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-mpicbs01/anat/{sub-mpicbs01_T2w_labels-disc-manual.json => sub-mpicbs01_space-other_T2w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-mpicbs01/anat/{sub-mpicbs01_T2w_labels-disc-manual.nii.gz => sub-mpicbs01_space-other_T2w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-mpicbs01/anat/{sub-mpicbs01_flip-1_mt-on_MTS_seg-manual.json => sub-mpicbs01_space-other_T2w_seg-manual.json} (100%) rename derivatives/labels/sub-mpicbs01/anat/{sub-mpicbs01_T2w_seg-manual.nii.gz => sub-mpicbs01_space-other_T2w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-mpicbs02/anat/{sub-mpicbs02_flip-1_mt-on_MTS_seg-manual.json => sub-mpicbs02_flip-1_mt-on_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-mpicbs02/anat/{sub-mpicbs02_flip-1_mt-on_MTS_seg-manual.nii.gz => sub-mpicbs02_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-mpicbs02/anat/{sub-mpicbs02_flip-2_mt-off_MTS_seg-manual.json => sub-mpicbs02_flip-2_mt-off_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-mpicbs02/anat/{sub-mpicbs02_flip-2_mt-off_MTS_seg-manual.nii.gz => sub-mpicbs02_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-mpicbs02/anat/{sub-mpicbs02_T1w_labels-disc-manual.json => sub-mpicbs02_space-other_T1w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-mpicbs02/anat/{sub-mpicbs02_T1w_labels-disc-manual.nii.gz => sub-mpicbs02_space-other_T1w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-mpicbs02/anat/{sub-mpicbs02_T1w_seg-manual.json => sub-mpicbs02_space-other_T1w_seg-manual.json} (100%) rename derivatives/labels/sub-mpicbs02/anat/{sub-mpicbs02_T1w_seg-manual.nii.gz => sub-mpicbs02_space-other_T1w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-mpicbs02/anat/{sub-mpicbs02_T2star_seg-manual.json => sub-mpicbs02_space-other_T2star_seg-manual.json} (100%) rename derivatives/labels/sub-mpicbs02/anat/{sub-mpicbs02_T2star_seg-manual.nii.gz => sub-mpicbs02_space-other_T2star_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-mpicbs02/anat/{sub-mpicbs02_T2w_labels-disc-manual.json => sub-mpicbs02_space-other_T2w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-mpicbs02/anat/{sub-mpicbs02_T2w_labels-disc-manual.nii.gz => sub-mpicbs02_space-other_T2w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-mpicbs02/anat/{sub-mpicbs02_T2w_seg-manual.json => sub-mpicbs02_space-other_T2w_seg-manual.json} (100%) rename derivatives/labels/sub-mpicbs02/anat/{sub-mpicbs02_T2w_seg-manual.nii.gz => sub-mpicbs02_space-other_T2w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-mpicbs03/anat/{sub-mpicbs03_T2star_seg-manual.json => sub-mpicbs03_flip-1_mt-on_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-mpicbs03/anat/{sub-mpicbs03_flip-1_mt-on_MTS_seg-manual.nii.gz => sub-mpicbs03_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-mpicbs03/anat/{sub-mpicbs03_flip-2_mt-off_MTS_seg-manual.json => sub-mpicbs03_flip-2_mt-off_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-mpicbs03/anat/{sub-mpicbs03_flip-2_mt-off_MTS_seg-manual.nii.gz => sub-mpicbs03_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-mpicbs03/anat/{sub-mpicbs03_T1w_labels-disc-manual.json => sub-mpicbs03_space-other_T1w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-mpicbs03/anat/{sub-mpicbs03_T1w_labels-disc-manual.nii.gz => sub-mpicbs03_space-other_T1w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-mpicbs03/anat/{sub-mpicbs03_T1w_seg-manual.json => sub-mpicbs03_space-other_T1w_seg-manual.json} (100%) rename derivatives/labels/sub-mpicbs03/anat/{sub-mpicbs03_T1w_seg-manual.nii.gz => sub-mpicbs03_space-other_T1w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-mpicbs03/anat/{sub-mpicbs03_flip-1_mt-on_MTS_seg-manual.json => sub-mpicbs03_space-other_T2star_seg-manual.json} (100%) rename derivatives/labels/sub-mpicbs03/anat/{sub-mpicbs03_T2star_seg-manual.nii.gz => sub-mpicbs03_space-other_T2star_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-mpicbs03/anat/{sub-mpicbs03_T2w_labels-disc-manual.json => sub-mpicbs03_space-other_T2w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-mpicbs03/anat/{sub-mpicbs03_T2w_labels-disc-manual.nii.gz => sub-mpicbs03_space-other_T2w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-mpicbs03/anat/{sub-mpicbs03_T2w_seg-manual.json => sub-mpicbs03_space-other_T2w_seg-manual.json} (100%) rename derivatives/labels/sub-mpicbs03/anat/{sub-mpicbs03_T2w_seg-manual.nii.gz => sub-mpicbs03_space-other_T2w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-mpicbs05/anat/{sub-mpicbs05_T2star_seg-manual.json => sub-mpicbs05_flip-1_mt-on_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-mpicbs05/anat/{sub-mpicbs05_flip-1_mt-on_MTS_seg-manual.nii.gz => sub-mpicbs05_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-mpicbs05/anat/{sub-mpicbs05_flip-2_mt-off_MTS_seg-manual.json => sub-mpicbs05_flip-2_mt-off_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-mpicbs05/anat/{sub-mpicbs05_flip-2_mt-off_MTS_seg-manual.nii.gz => sub-mpicbs05_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-mpicbs05/anat/{sub-mpicbs05_T1w_labels-disc-manual.json => sub-mpicbs05_space-other_T1w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-mpicbs05/anat/{sub-mpicbs05_T1w_labels-disc-manual.nii.gz => sub-mpicbs05_space-other_T1w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-mpicbs05/anat/{sub-mpicbs05_T1w_seg-manual.json => sub-mpicbs05_space-other_T1w_seg-manual.json} (100%) rename derivatives/labels/sub-mpicbs05/anat/{sub-mpicbs05_T1w_seg-manual.nii.gz => sub-mpicbs05_space-other_T1w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-mpicbs05/anat/{sub-mpicbs05_flip-1_mt-on_MTS_seg-manual.json => sub-mpicbs05_space-other_T2star_seg-manual.json} (100%) rename derivatives/labels/sub-mpicbs05/anat/{sub-mpicbs05_T2star_seg-manual.nii.gz => sub-mpicbs05_space-other_T2star_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-mpicbs05/anat/{sub-mpicbs05_T2w_labels-disc-manual.json => sub-mpicbs05_space-other_T2w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-mpicbs05/anat/{sub-mpicbs05_T2w_labels-disc-manual.nii.gz => sub-mpicbs05_space-other_T2w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-mpicbs05/anat/{sub-mpicbs05_T2w_seg-manual.json => sub-mpicbs05_space-other_T2w_seg-manual.json} (100%) rename derivatives/labels/sub-mpicbs05/anat/{sub-mpicbs05_T2w_seg-manual.nii.gz => sub-mpicbs05_space-other_T2w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-mpicbs06/anat/{sub-mpicbs06_T2w_seg-manual.json => sub-mpicbs06_flip-1_mt-on_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-mpicbs06/anat/{sub-mpicbs06_flip-1_mt-on_MTS_seg-manual.nii.gz => sub-mpicbs06_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-mpicbs06/anat/{sub-mpicbs06_flip-2_mt-off_MTS_seg-manual.json => sub-mpicbs06_flip-2_mt-off_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-mpicbs06/anat/{sub-mpicbs06_flip-2_mt-off_MTS_seg-manual.nii.gz => sub-mpicbs06_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-mpicbs06/anat/{sub-mpicbs06_T1w_labels-disc-manual.json => sub-mpicbs06_space-other_T1w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-mpicbs06/anat/{sub-mpicbs06_T1w_labels-disc-manual.nii.gz => sub-mpicbs06_space-other_T1w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-mpicbs06/anat/{sub-mpicbs06_T1w_seg-manual.json => sub-mpicbs06_space-other_T1w_seg-manual.json} (100%) rename derivatives/labels/sub-mpicbs06/anat/{sub-mpicbs06_T1w_seg-manual.nii.gz => sub-mpicbs06_space-other_T1w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-mpicbs06/anat/{sub-mpicbs06_T2star_seg-manual.json => sub-mpicbs06_space-other_T2star_seg-manual.json} (100%) rename derivatives/labels/sub-mpicbs06/anat/{sub-mpicbs06_T2star_seg-manual.nii.gz => sub-mpicbs06_space-other_T2star_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-mpicbs06/anat/{sub-mpicbs06_T2w_labels-disc-manual.json => sub-mpicbs06_space-other_T2w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-mpicbs06/anat/{sub-mpicbs06_T2w_labels-disc-manual.nii.gz => sub-mpicbs06_space-other_T2w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-mpicbs06/anat/{sub-mpicbs06_flip-1_mt-on_MTS_seg-manual.json => sub-mpicbs06_space-other_T2w_seg-manual.json} (100%) rename derivatives/labels/sub-mpicbs06/anat/{sub-mpicbs06_T2w_seg-manual.nii.gz => sub-mpicbs06_space-other_T2w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-mpicbs07/anat/{sub-mpicbs07_T2star_seg-manual.json => sub-mpicbs07_flip-1_mt-on_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-mpicbs07/anat/{sub-mpicbs07_flip-1_mt-on_MTS_seg-manual.nii.gz => sub-mpicbs07_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-mpicbs07/anat/{sub-mpicbs07_flip-2_mt-off_MTS_seg-manual.json => sub-mpicbs07_flip-2_mt-off_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-mpicbs07/anat/{sub-mpicbs07_flip-2_mt-off_MTS_seg-manual.nii.gz => sub-mpicbs07_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-mpicbs07/anat/{sub-mpicbs07_T1w_labels-disc-manual.json => sub-mpicbs07_space-other_T1w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-mpicbs07/anat/{sub-mpicbs07_T1w_labels-disc-manual.nii.gz => sub-mpicbs07_space-other_T1w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-mpicbs07/anat/{sub-mpicbs07_T1w_seg-manual.json => sub-mpicbs07_space-other_T1w_seg-manual.json} (100%) rename derivatives/labels/sub-mpicbs07/anat/{sub-mpicbs07_T1w_seg-manual.nii.gz => sub-mpicbs07_space-other_T1w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-mpicbs07/anat/{sub-mpicbs07_flip-1_mt-on_MTS_seg-manual.json => sub-mpicbs07_space-other_T2star_seg-manual.json} (100%) rename derivatives/labels/sub-mpicbs07/anat/{sub-mpicbs07_T2star_seg-manual.nii.gz => sub-mpicbs07_space-other_T2star_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-mpicbs07/anat/{sub-mpicbs07_T2w_labels-disc-manual.json => sub-mpicbs07_space-other_T2w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-mpicbs07/anat/{sub-mpicbs07_T2w_labels-disc-manual.nii.gz => sub-mpicbs07_space-other_T2w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-mpicbs07/anat/{sub-mpicbs07_T2w_seg-manual.json => sub-mpicbs07_space-other_T2w_seg-manual.json} (100%) rename derivatives/labels/sub-mpicbs07/anat/{sub-mpicbs07_T2w_seg-manual.nii.gz => sub-mpicbs07_space-other_T2w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-nottwil01/anat/{sub-nottwil01_T2star_seg-manual.json => sub-nottwil01_flip-1_mt-on_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-nottwil01/anat/{sub-nottwil01_flip-1_mt-on_MTS_seg-manual.nii.gz => sub-nottwil01_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-nottwil01/anat/{sub-nottwil01_flip-1_mt-on_MTS_seg-manual.json => sub-nottwil01_flip-2_mt-off_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-nottwil01/anat/{sub-nottwil01_flip-2_mt-off_MTS_seg-manual.nii.gz => sub-nottwil01_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-nottwil01/anat/{sub-nottwil01_T1w_labels-disc-manual.json => sub-nottwil01_space-other_T1w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-nottwil01/anat/{sub-nottwil01_T1w_labels-disc-manual.nii.gz => sub-nottwil01_space-other_T1w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-nottwil01/anat/{sub-nottwil01_T1w_seg-manual.json => sub-nottwil01_space-other_T1w_seg-manual.json} (100%) rename derivatives/labels/sub-nottwil01/anat/{sub-nottwil01_T1w_seg-manual.nii.gz => sub-nottwil01_space-other_T1w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-nottwil01/anat/{sub-nottwil01_T2star_gmseg-manual.json => sub-nottwil01_space-other_T2star_gmseg-manual.json} (100%) rename derivatives/labels/sub-nottwil01/anat/{sub-nottwil01_T2star_gmseg-manual.nii.gz => sub-nottwil01_space-other_T2star_gmseg-manual.nii.gz} (100%) rename derivatives/labels/sub-nottwil01/anat/{sub-nottwil01_flip-2_mt-off_MTS_seg-manual.json => sub-nottwil01_space-other_T2star_seg-manual.json} (100%) rename derivatives/labels/sub-nottwil01/anat/{sub-nottwil01_T2star_seg-manual.nii.gz => sub-nottwil01_space-other_T2star_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-nottwil01/anat/{sub-nottwil01_T2w_csfseg-manual.json => sub-nottwil01_space-other_T2w_csfseg-manual.json} (100%) rename derivatives/labels/sub-nottwil01/anat/{sub-nottwil01_T2w_csfseg-manual.nii.gz => sub-nottwil01_space-other_T2w_csfseg-manual.nii.gz} (100%) rename derivatives/labels/sub-nottwil01/anat/{sub-nottwil01_T2w_labels-disc-manual.json => sub-nottwil01_space-other_T2w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-nottwil01/anat/{sub-nottwil01_T2w_labels-disc-manual.nii.gz => sub-nottwil01_space-other_T2w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-nottwil01/anat/{sub-nottwil01_T2w_seg-manual.json => sub-nottwil01_space-other_T2w_seg-manual.json} (100%) rename derivatives/labels/sub-nottwil01/anat/{sub-nottwil01_T2w_seg-manual.nii.gz => sub-nottwil01_space-other_T2w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-nottwil02/anat/{sub-nottwil02_flip-1_mt-on_MTS_seg-manual.json => sub-nottwil02_flip-1_mt-on_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-nottwil02/anat/{sub-nottwil02_flip-1_mt-on_MTS_seg-manual.nii.gz => sub-nottwil02_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-nottwil02/anat/{sub-nottwil02_flip-2_mt-off_MTS_seg-manual.json => sub-nottwil02_flip-2_mt-off_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-nottwil02/anat/{sub-nottwil02_flip-2_mt-off_MTS_seg-manual.nii.gz => sub-nottwil02_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-nottwil02/anat/{sub-nottwil02_T1w_labels-disc-manual.json => sub-nottwil02_space-other_T1w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-nottwil02/anat/{sub-nottwil02_T1w_labels-disc-manual.nii.gz => sub-nottwil02_space-other_T1w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-nottwil02/anat/{sub-nottwil02_T1w_seg-manual.json => sub-nottwil02_space-other_T1w_seg-manual.json} (100%) rename derivatives/labels/sub-nottwil02/anat/{sub-nottwil02_T1w_seg-manual.nii.gz => sub-nottwil02_space-other_T1w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-nottwil02/anat/{sub-nottwil02_T2star_seg-manual.json => sub-nottwil02_space-other_T2star_seg-manual.json} (100%) rename derivatives/labels/sub-nottwil02/anat/{sub-nottwil02_T2star_seg-manual.nii.gz => sub-nottwil02_space-other_T2star_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-nottwil02/anat/{sub-nottwil02_T2w_labels-disc-manual.json => sub-nottwil02_space-other_T2w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-nottwil02/anat/{sub-nottwil02_T2w_labels-disc-manual.nii.gz => sub-nottwil02_space-other_T2w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-nottwil02/anat/{sub-nottwil02_T2w_seg-manual.json => sub-nottwil02_space-other_T2w_seg-manual.json} (100%) rename derivatives/labels/sub-nottwil02/anat/{sub-nottwil02_T2w_seg-manual.nii.gz => sub-nottwil02_space-other_T2w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-nottwil03/anat/{sub-nottwil03_T2star_seg-manual.json => sub-nottwil03_flip-1_mt-on_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-nottwil03/anat/{sub-nottwil03_flip-1_mt-on_MTS_seg-manual.nii.gz => sub-nottwil03_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-nottwil03/anat/{sub-nottwil03_flip-1_mt-on_MTS_seg-manual.json => sub-nottwil03_flip-2_mt-off_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-nottwil03/anat/{sub-nottwil03_flip-2_mt-off_MTS_seg-manual.nii.gz => sub-nottwil03_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-nottwil03/anat/{sub-nottwil03_T1w_labels-disc-manual.json => sub-nottwil03_space-other_T1w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-nottwil03/anat/{sub-nottwil03_T1w_labels-disc-manual.nii.gz => sub-nottwil03_space-other_T1w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-nottwil03/anat/{sub-nottwil03_T1w_seg-manual.json => sub-nottwil03_space-other_T1w_seg-manual.json} (100%) rename derivatives/labels/sub-nottwil03/anat/{sub-nottwil03_T1w_seg-manual.nii.gz => sub-nottwil03_space-other_T1w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-nottwil03/anat/{sub-nottwil03_T2star_gmseg-manual.json => sub-nottwil03_space-other_T2star_gmseg-manual.json} (100%) rename derivatives/labels/sub-nottwil03/anat/{sub-nottwil03_T2star_gmseg-manual.nii.gz => sub-nottwil03_space-other_T2star_gmseg-manual.nii.gz} (100%) rename derivatives/labels/sub-nottwil03/anat/{sub-nottwil03_flip-2_mt-off_MTS_seg-manual.json => sub-nottwil03_space-other_T2star_seg-manual.json} (100%) rename derivatives/labels/sub-nottwil03/anat/{sub-nottwil03_T2star_seg-manual.nii.gz => sub-nottwil03_space-other_T2star_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-nottwil03/anat/{sub-nottwil03_T2w_csfseg-manual.json => sub-nottwil03_space-other_T2w_csfseg-manual.json} (100%) rename derivatives/labels/sub-nottwil03/anat/{sub-nottwil03_T2w_csfseg-manual.nii.gz => sub-nottwil03_space-other_T2w_csfseg-manual.nii.gz} (100%) rename derivatives/labels/sub-nottwil03/anat/{sub-nottwil03_T2w_labels-disc-manual.json => sub-nottwil03_space-other_T2w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-nottwil03/anat/{sub-nottwil03_T2w_labels-disc-manual.nii.gz => sub-nottwil03_space-other_T2w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-nottwil03/anat/{sub-nottwil03_T2w_seg-manual.json => sub-nottwil03_space-other_T2w_seg-manual.json} (100%) rename derivatives/labels/sub-nottwil03/anat/{sub-nottwil03_T2w_seg-manual.nii.gz => sub-nottwil03_space-other_T2w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-nottwil04/anat/{sub-nottwil04_flip-1_mt-on_MTS_seg-manual.json => sub-nottwil04_flip-1_mt-on_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-nottwil04/anat/{sub-nottwil04_flip-1_mt-on_MTS_seg-manual.nii.gz => sub-nottwil04_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-nottwil04/anat/{sub-nottwil04_flip-2_mt-off_MTS_seg-manual.json => sub-nottwil04_flip-2_mt-off_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-nottwil04/anat/{sub-nottwil04_flip-2_mt-off_MTS_seg-manual.nii.gz => sub-nottwil04_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-nottwil04/anat/{sub-nottwil04_T1w_labels-disc-manual.json => sub-nottwil04_space-other_T1w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-nottwil04/anat/{sub-nottwil04_T1w_labels-disc-manual.nii.gz => sub-nottwil04_space-other_T1w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-nottwil04/anat/{sub-nottwil04_T1w_seg-manual.json => sub-nottwil04_space-other_T1w_seg-manual.json} (100%) rename derivatives/labels/sub-nottwil04/anat/{sub-nottwil04_T1w_seg-manual.nii.gz => sub-nottwil04_space-other_T1w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-nottwil04/anat/{sub-nottwil04_T2star_seg-manual.json => sub-nottwil04_space-other_T2star_seg-manual.json} (100%) rename derivatives/labels/sub-nottwil04/anat/{sub-nottwil04_T2star_seg-manual.nii.gz => sub-nottwil04_space-other_T2star_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-nottwil04/anat/{sub-nottwil04_T2w_csfseg-manual.json => sub-nottwil04_space-other_T2w_csfseg-manual.json} (100%) rename derivatives/labels/sub-nottwil04/anat/{sub-nottwil04_T2w_csfseg-manual.nii.gz => sub-nottwil04_space-other_T2w_csfseg-manual.nii.gz} (100%) rename derivatives/labels/sub-nottwil04/anat/{sub-nottwil04_T2w_labels-disc-manual.json => sub-nottwil04_space-other_T2w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-nottwil04/anat/{sub-nottwil04_T2w_labels-disc-manual.nii.gz => sub-nottwil04_space-other_T2w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-nottwil04/anat/{sub-nottwil04_T2w_seg-manual.json => sub-nottwil04_space-other_T2w_seg-manual.json} (100%) rename derivatives/labels/sub-nottwil04/anat/{sub-nottwil04_T2w_seg-manual.nii.gz => sub-nottwil04_space-other_T2w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-nottwil05/anat/{sub-nottwil05_T2star_seg-manual.json => sub-nottwil05_flip-1_mt-on_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-nottwil05/anat/{sub-nottwil05_flip-1_mt-on_MTS_seg-manual.nii.gz => sub-nottwil05_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-nottwil05/anat/{sub-nottwil05_T2w_seg-manual.json => sub-nottwil05_flip-2_mt-off_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-nottwil05/anat/{sub-nottwil05_flip-2_mt-off_MTS_seg-manual.nii.gz => sub-nottwil05_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-nottwil05/anat/{sub-nottwil05_T1w_labels-disc-manual.json => sub-nottwil05_space-other_T1w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-nottwil05/anat/{sub-nottwil05_T1w_labels-disc-manual.nii.gz => sub-nottwil05_space-other_T1w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-nottwil05/anat/{sub-nottwil05_T1w_seg-manual.json => sub-nottwil05_space-other_T1w_seg-manual.json} (100%) rename derivatives/labels/sub-nottwil05/anat/{sub-nottwil05_T1w_seg-manual.nii.gz => sub-nottwil05_space-other_T1w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-nottwil05/anat/{sub-nottwil05_flip-1_mt-on_MTS_seg-manual.json => sub-nottwil05_space-other_T2star_seg-manual.json} (100%) rename derivatives/labels/sub-nottwil05/anat/{sub-nottwil05_T2star_seg-manual.nii.gz => sub-nottwil05_space-other_T2star_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-nottwil05/anat/{sub-nottwil05_T2w_labels-disc-manual.json => sub-nottwil05_space-other_T2w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-nottwil05/anat/{sub-nottwil05_T2w_labels-disc-manual.nii.gz => sub-nottwil05_space-other_T2w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-nottwil05/anat/{sub-nottwil05_flip-2_mt-off_MTS_seg-manual.json => sub-nottwil05_space-other_T2w_seg-manual.json} (100%) rename derivatives/labels/sub-nottwil05/anat/{sub-nottwil05_T2w_seg-manual.nii.gz => sub-nottwil05_space-other_T2w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-nottwil06/anat/{sub-nottwil06_T2star_seg-manual.json => sub-nottwil06_flip-1_mt-on_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-nottwil06/anat/{sub-nottwil06_flip-1_mt-on_MTS_seg-manual.nii.gz => sub-nottwil06_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-nottwil06/anat/{sub-nottwil06_flip-2_mt-off_MTS_seg-manual.json => sub-nottwil06_flip-2_mt-off_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-nottwil06/anat/{sub-nottwil06_flip-2_mt-off_MTS_seg-manual.nii.gz => sub-nottwil06_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-nottwil06/anat/{sub-nottwil06_T1w_labels-disc-manual.json => sub-nottwil06_space-other_T1w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-nottwil06/anat/{sub-nottwil06_T1w_labels-disc-manual.nii.gz => sub-nottwil06_space-other_T1w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-nottwil06/anat/{sub-nottwil06_T1w_seg-manual.json => sub-nottwil06_space-other_T1w_seg-manual.json} (100%) rename derivatives/labels/sub-nottwil06/anat/{sub-nottwil06_T1w_seg-manual.nii.gz => sub-nottwil06_space-other_T1w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-nottwil06/anat/{sub-nottwil06_T2w_seg-manual.json => sub-nottwil06_space-other_T2star_seg-manual.json} (100%) rename derivatives/labels/sub-nottwil06/anat/{sub-nottwil06_T2star_seg-manual.nii.gz => sub-nottwil06_space-other_T2star_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-nottwil06/anat/{sub-nottwil06_T2w_labels-disc-manual.json => sub-nottwil06_space-other_T2w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-nottwil06/anat/{sub-nottwil06_T2w_labels-disc-manual.nii.gz => sub-nottwil06_space-other_T2w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-nottwil06/anat/{sub-nottwil06_flip-1_mt-on_MTS_seg-manual.json => sub-nottwil06_space-other_T2w_seg-manual.json} (100%) rename derivatives/labels/sub-nottwil06/anat/{sub-nottwil06_T2w_seg-manual.nii.gz => sub-nottwil06_space-other_T2w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-nwu01/anat/{sub-nwu01_T2star_seg-manual.json => sub-nwu01_flip-1_mt-on_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-nwu01/anat/{sub-nwu01_flip-1_mt-on_MTS_seg-manual.nii.gz => sub-nwu01_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-nwu01/anat/{sub-nwu01_flip-1_mt-on_MTS_seg-manual.json => sub-nwu01_flip-2_mt-off_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-nwu01/anat/{sub-nwu01_flip-2_mt-off_MTS_seg-manual.nii.gz => sub-nwu01_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-nwu01/anat/{sub-nwu01_T1w_labels-disc-manual.json => sub-nwu01_space-other_T1w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-nwu01/anat/{sub-nwu01_T1w_labels-disc-manual.nii.gz => sub-nwu01_space-other_T1w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-nwu01/anat/{sub-nwu01_T1w_seg-manual.json => sub-nwu01_space-other_T1w_seg-manual.json} (100%) rename derivatives/labels/sub-nwu01/anat/{sub-nwu01_T1w_seg-manual.nii.gz => sub-nwu01_space-other_T1w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-nwu01/anat/{sub-nwu01_flip-2_mt-off_MTS_seg-manual.json => sub-nwu01_space-other_T2star_seg-manual.json} (100%) rename derivatives/labels/sub-nwu01/anat/{sub-nwu01_T2star_seg-manual.nii.gz => sub-nwu01_space-other_T2star_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-nwu01/anat/{sub-nwu01_T2w_labels-disc-manual.json => sub-nwu01_space-other_T2w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-nwu01/anat/{sub-nwu01_T2w_labels-disc-manual.nii.gz => sub-nwu01_space-other_T2w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-nwu01/anat/{sub-nwu01_T2w_seg-manual.json => sub-nwu01_space-other_T2w_seg-manual.json} (100%) rename derivatives/labels/sub-nwu01/anat/{sub-nwu01_T2w_seg-manual.nii.gz => sub-nwu01_space-other_T2w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-nwu02/anat/{sub-nwu02_T2star_seg-manual.json => sub-nwu02_flip-1_mt-on_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-nwu02/anat/{sub-nwu02_flip-1_mt-on_MTS_seg-manual.nii.gz => sub-nwu02_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-nwu02/anat/{sub-nwu02_flip-2_mt-off_MTS_seg-manual.json => sub-nwu02_flip-2_mt-off_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-nwu02/anat/{sub-nwu02_flip-2_mt-off_MTS_seg-manual.nii.gz => sub-nwu02_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-nwu02/anat/{sub-nwu02_T1w_labels-disc-manual.json => sub-nwu02_space-other_T1w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-nwu02/anat/{sub-nwu02_T1w_labels-disc-manual.nii.gz => sub-nwu02_space-other_T1w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-nwu02/anat/{sub-nwu02_T1w_seg-manual.json => sub-nwu02_space-other_T1w_seg-manual.json} (100%) rename derivatives/labels/sub-nwu02/anat/{sub-nwu02_T1w_seg-manual.nii.gz => sub-nwu02_space-other_T1w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-nwu02/anat/{sub-nwu02_flip-1_mt-on_MTS_seg-manual.json => sub-nwu02_space-other_T2star_seg-manual.json} (100%) rename derivatives/labels/sub-nwu02/anat/{sub-nwu02_T2star_seg-manual.nii.gz => sub-nwu02_space-other_T2star_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-nwu02/anat/{sub-nwu02_T2w_labels-disc-manual.json => sub-nwu02_space-other_T2w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-nwu02/anat/{sub-nwu02_T2w_labels-disc-manual.nii.gz => sub-nwu02_space-other_T2w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-nwu02/anat/{sub-nwu02_T2w_seg-manual.json => sub-nwu02_space-other_T2w_seg-manual.json} (100%) rename derivatives/labels/sub-nwu02/anat/{sub-nwu02_T2w_seg-manual.nii.gz => sub-nwu02_space-other_T2w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-nwu03/anat/{sub-nwu03_T2star_seg-manual.json => sub-nwu03_flip-1_mt-on_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-nwu03/anat/{sub-nwu03_flip-1_mt-on_MTS_seg-manual.nii.gz => sub-nwu03_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-nwu03/anat/{sub-nwu03_flip-2_mt-off_MTS_seg-manual.json => sub-nwu03_flip-2_mt-off_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-nwu03/anat/{sub-nwu03_flip-2_mt-off_MTS_seg-manual.nii.gz => sub-nwu03_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-nwu03/anat/{sub-nwu03_T1w_labels-disc-manual.json => sub-nwu03_space-other_T1w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-nwu03/anat/{sub-nwu03_T1w_labels-disc-manual.nii.gz => sub-nwu03_space-other_T1w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-nwu03/anat/{sub-nwu03_T1w_seg-manual.json => sub-nwu03_space-other_T1w_seg-manual.json} (100%) rename derivatives/labels/sub-nwu03/anat/{sub-nwu03_T1w_seg-manual.nii.gz => sub-nwu03_space-other_T1w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-nwu03/anat/{sub-nwu03_flip-1_mt-on_MTS_seg-manual.json => sub-nwu03_space-other_T2star_seg-manual.json} (100%) rename derivatives/labels/sub-nwu03/anat/{sub-nwu03_T2star_seg-manual.nii.gz => sub-nwu03_space-other_T2star_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-nwu03/anat/{sub-nwu03_T2w_labels-disc-manual.json => sub-nwu03_space-other_T2w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-nwu03/anat/{sub-nwu03_T2w_labels-disc-manual.nii.gz => sub-nwu03_space-other_T2w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-nwu03/anat/{sub-nwu03_T2w_seg-manual.json => sub-nwu03_space-other_T2w_seg-manual.json} (100%) rename derivatives/labels/sub-nwu03/anat/{sub-nwu03_T2w_seg-manual.nii.gz => sub-nwu03_space-other_T2w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-nwu04/anat/{sub-nwu04_T2star_seg-manual.json => sub-nwu04_flip-1_mt-on_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-nwu04/anat/{sub-nwu04_flip-1_mt-on_MTS_seg-manual.nii.gz => sub-nwu04_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-nwu04/anat/{sub-nwu04_flip-1_mt-on_MTS_seg-manual.json => sub-nwu04_flip-2_mt-off_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-nwu04/anat/{sub-nwu04_flip-2_mt-off_MTS_seg-manual.nii.gz => sub-nwu04_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-nwu04/anat/{sub-nwu04_T1w_labels-disc-manual.json => sub-nwu04_space-other_T1w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-nwu04/anat/{sub-nwu04_T1w_labels-disc-manual.nii.gz => sub-nwu04_space-other_T1w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-nwu04/anat/{sub-nwu04_T1w_seg-manual.json => sub-nwu04_space-other_T1w_seg-manual.json} (100%) rename derivatives/labels/sub-nwu04/anat/{sub-nwu04_T1w_seg-manual.nii.gz => sub-nwu04_space-other_T1w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-nwu04/anat/{sub-nwu04_flip-2_mt-off_MTS_seg-manual.json => sub-nwu04_space-other_T2star_seg-manual.json} (100%) rename derivatives/labels/sub-nwu04/anat/{sub-nwu04_T2star_seg-manual.nii.gz => sub-nwu04_space-other_T2star_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-nwu04/anat/{sub-nwu04_T2w_labels-disc-manual.json => sub-nwu04_space-other_T2w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-nwu04/anat/{sub-nwu04_T2w_labels-disc-manual.nii.gz => sub-nwu04_space-other_T2w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-nwu04/anat/{sub-nwu04_T2w_seg-manual.json => sub-nwu04_space-other_T2w_seg-manual.json} (100%) rename derivatives/labels/sub-nwu04/anat/{sub-nwu04_T2w_seg-manual.nii.gz => sub-nwu04_space-other_T2w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-nwu05/anat/{sub-nwu05_flip-1_mt-on_MTS_seg-manual.json => sub-nwu05_flip-1_mt-on_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-nwu05/anat/{sub-nwu05_flip-1_mt-on_MTS_seg-manual.nii.gz => sub-nwu05_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-nwu05/anat/{sub-nwu05_T2star_seg-manual.json => sub-nwu05_flip-2_mt-off_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-nwu05/anat/{sub-nwu05_flip-2_mt-off_MTS_seg-manual.nii.gz => sub-nwu05_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-nwu05/anat/{sub-nwu05_T1w_labels-disc-manual.json => sub-nwu05_space-other_T1w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-nwu05/anat/{sub-nwu05_T1w_labels-disc-manual.nii.gz => sub-nwu05_space-other_T1w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-nwu05/anat/{sub-nwu05_T1w_seg-manual.json => sub-nwu05_space-other_T1w_seg-manual.json} (100%) rename derivatives/labels/sub-nwu05/anat/{sub-nwu05_T1w_seg-manual.nii.gz => sub-nwu05_space-other_T1w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-nwu05/anat/{sub-nwu05_flip-2_mt-off_MTS_seg-manual.json => sub-nwu05_space-other_T2star_seg-manual.json} (100%) rename derivatives/labels/sub-nwu05/anat/{sub-nwu05_T2star_seg-manual.nii.gz => sub-nwu05_space-other_T2star_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-nwu05/anat/{sub-nwu05_T2w_labels-disc-manual.json => sub-nwu05_space-other_T2w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-nwu05/anat/{sub-nwu05_T2w_labels-disc-manual.nii.gz => sub-nwu05_space-other_T2w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-nwu05/anat/{sub-nwu05_T2w_seg-manual.json => sub-nwu05_space-other_T2w_seg-manual.json} (100%) rename derivatives/labels/sub-nwu05/anat/{sub-nwu05_T2w_seg-manual.nii.gz => sub-nwu05_space-other_T2w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-nwu06/anat/{sub-nwu06_T2star_seg-manual.json => sub-nwu06_flip-1_mt-on_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-nwu06/anat/{sub-nwu06_flip-1_mt-on_MTS_seg-manual.nii.gz => sub-nwu06_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-nwu06/anat/{sub-nwu06_flip-2_mt-off_MTS_seg-manual.json => sub-nwu06_flip-2_mt-off_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-nwu06/anat/{sub-nwu06_flip-2_mt-off_MTS_seg-manual.nii.gz => sub-nwu06_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-nwu06/anat/{sub-nwu06_T1w_labels-disc-manual.json => sub-nwu06_space-other_T1w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-nwu06/anat/{sub-nwu06_T1w_labels-disc-manual.nii.gz => sub-nwu06_space-other_T1w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-nwu06/anat/{sub-nwu06_T1w_seg-manual.json => sub-nwu06_space-other_T1w_seg-manual.json} (100%) rename derivatives/labels/sub-nwu06/anat/{sub-nwu06_T1w_seg-manual.nii.gz => sub-nwu06_space-other_T1w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-nwu06/anat/{sub-nwu06_flip-1_mt-on_MTS_seg-manual.json => sub-nwu06_space-other_T2star_seg-manual.json} (100%) rename derivatives/labels/sub-nwu06/anat/{sub-nwu06_T2star_seg-manual.nii.gz => sub-nwu06_space-other_T2star_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-nwu06/anat/{sub-nwu06_T2w_labels-disc-manual.json => sub-nwu06_space-other_T2w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-nwu06/anat/{sub-nwu06_T2w_labels-disc-manual.nii.gz => sub-nwu06_space-other_T2w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-nwu06/anat/{sub-nwu06_T2w_seg-manual.json => sub-nwu06_space-other_T2w_seg-manual.json} (100%) rename derivatives/labels/sub-nwu06/anat/{sub-nwu06_T2w_seg-manual.nii.gz => sub-nwu06_space-other_T2w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-oxfordFmrib01/anat/{sub-oxfordFmrib01_flip-1_mt-on_MTS_seg-manual.json => sub-oxfordFmrib01_flip-1_mt-on_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-oxfordFmrib01/anat/{sub-oxfordFmrib01_flip-1_mt-on_MTS_seg-manual.nii.gz => sub-oxfordFmrib01_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-oxfordFmrib01/anat/{sub-oxfordFmrib01_flip-2_mt-off_MTS_seg-manual.json => sub-oxfordFmrib01_flip-2_mt-off_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-oxfordFmrib01/anat/{sub-oxfordFmrib01_flip-2_mt-off_MTS_seg-manual.nii.gz => sub-oxfordFmrib01_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-oxfordFmrib01/anat/{sub-oxfordFmrib01_T1w_labels-disc-manual.json => sub-oxfordFmrib01_space-other_T1w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-oxfordFmrib01/anat/{sub-oxfordFmrib01_T1w_labels-disc-manual.nii.gz => sub-oxfordFmrib01_space-other_T1w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-oxfordFmrib01/anat/{sub-oxfordFmrib01_T1w_seg-manual.json => sub-oxfordFmrib01_space-other_T1w_seg-manual.json} (100%) rename derivatives/labels/sub-oxfordFmrib01/anat/{sub-oxfordFmrib01_T1w_seg-manual.nii.gz => sub-oxfordFmrib01_space-other_T1w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-oxfordFmrib01/anat/{sub-oxfordFmrib01_T2star_seg-manual.json => sub-oxfordFmrib01_space-other_T2star_seg-manual.json} (100%) rename derivatives/labels/sub-oxfordFmrib01/anat/{sub-oxfordFmrib01_T2star_seg-manual.nii.gz => sub-oxfordFmrib01_space-other_T2star_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-oxfordFmrib01/anat/{sub-oxfordFmrib01_T2w_labels-disc-manual.json => sub-oxfordFmrib01_space-other_T2w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-oxfordFmrib01/anat/{sub-oxfordFmrib01_T2w_labels-disc-manual.nii.gz => sub-oxfordFmrib01_space-other_T2w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-oxfordFmrib01/anat/{sub-oxfordFmrib01_T2w_seg-manual.json => sub-oxfordFmrib01_space-other_T2w_seg-manual.json} (100%) rename derivatives/labels/sub-oxfordFmrib01/anat/{sub-oxfordFmrib01_T2w_seg-manual.nii.gz => sub-oxfordFmrib01_space-other_T2w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-oxfordFmrib02/anat/{sub-oxfordFmrib02_T2star_seg-manual.json => sub-oxfordFmrib02_flip-1_mt-on_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-oxfordFmrib02/anat/{sub-oxfordFmrib02_flip-1_mt-on_MTS_seg-manual.nii.gz => sub-oxfordFmrib02_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-oxfordFmrib02/anat/{sub-oxfordFmrib02_flip-2_mt-off_MTS_seg-manual.json => sub-oxfordFmrib02_flip-2_mt-off_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-oxfordFmrib02/anat/{sub-oxfordFmrib02_flip-2_mt-off_MTS_seg-manual.nii.gz => sub-oxfordFmrib02_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-oxfordFmrib02/anat/{sub-oxfordFmrib02_T1w_labels-disc-manual.json => sub-oxfordFmrib02_space-other_T1w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-oxfordFmrib02/anat/{sub-oxfordFmrib02_T1w_labels-disc-manual.nii.gz => sub-oxfordFmrib02_space-other_T1w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-oxfordFmrib02/anat/{sub-oxfordFmrib02_T1w_seg-manual.json => sub-oxfordFmrib02_space-other_T1w_seg-manual.json} (100%) rename derivatives/labels/sub-oxfordFmrib02/anat/{sub-oxfordFmrib02_T1w_seg-manual.nii.gz => sub-oxfordFmrib02_space-other_T1w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-oxfordFmrib02/anat/{sub-oxfordFmrib02_flip-1_mt-on_MTS_seg-manual.json => sub-oxfordFmrib02_space-other_T2star_seg-manual.json} (100%) rename derivatives/labels/sub-oxfordFmrib02/anat/{sub-oxfordFmrib02_T2star_seg-manual.nii.gz => sub-oxfordFmrib02_space-other_T2star_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-oxfordFmrib02/anat/{sub-oxfordFmrib02_T2w_labels-disc-manual.json => sub-oxfordFmrib02_space-other_T2w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-oxfordFmrib02/anat/{sub-oxfordFmrib02_T2w_labels-disc-manual.nii.gz => sub-oxfordFmrib02_space-other_T2w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-oxfordFmrib02/anat/{sub-oxfordFmrib02_T2w_seg-manual.json => sub-oxfordFmrib02_space-other_T2w_seg-manual.json} (100%) rename derivatives/labels/sub-oxfordFmrib02/anat/{sub-oxfordFmrib02_T2w_seg-manual.nii.gz => sub-oxfordFmrib02_space-other_T2w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-oxfordFmrib03/anat/{sub-oxfordFmrib03_T2star_seg-manual.json => sub-oxfordFmrib03_flip-1_mt-on_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-oxfordFmrib03/anat/{sub-oxfordFmrib03_flip-1_mt-on_MTS_seg-manual.nii.gz => sub-oxfordFmrib03_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-oxfordFmrib03/anat/{sub-oxfordFmrib03_flip-1_mt-on_MTS_seg-manual.json => sub-oxfordFmrib03_flip-2_mt-off_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-oxfordFmrib03/anat/{sub-oxfordFmrib03_flip-2_mt-off_MTS_seg-manual.nii.gz => sub-oxfordFmrib03_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-oxfordFmrib03/anat/{sub-oxfordFmrib03_T1w_RPI_r_labels-manual.nii.gz => sub-oxfordFmrib03_space-other_T1w_RPI_r_labels-manual.nii.gz} (100%) rename derivatives/labels/sub-oxfordFmrib03/anat/{sub-oxfordFmrib03_T1w_labels-disc-manual.json => sub-oxfordFmrib03_space-other_T1w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-oxfordFmrib03/anat/{sub-oxfordFmrib03_T1w_labels-disc-manual.nii.gz => sub-oxfordFmrib03_space-other_T1w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-oxfordFmrib03/anat/{sub-oxfordFmrib03_T1w_seg-manual.json => sub-oxfordFmrib03_space-other_T1w_seg-manual.json} (100%) rename derivatives/labels/sub-oxfordFmrib03/anat/{sub-oxfordFmrib03_T1w_seg-manual.nii.gz => sub-oxfordFmrib03_space-other_T1w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-oxfordFmrib03/anat/{sub-oxfordFmrib03_flip-2_mt-off_MTS_seg-manual.json => sub-oxfordFmrib03_space-other_T2star_seg-manual.json} (100%) rename derivatives/labels/sub-oxfordFmrib03/anat/{sub-oxfordFmrib03_T2star_seg-manual.nii.gz => sub-oxfordFmrib03_space-other_T2star_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-oxfordFmrib03/anat/{sub-oxfordFmrib03_T2w_labels-disc-manual.json => sub-oxfordFmrib03_space-other_T2w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-oxfordFmrib03/anat/{sub-oxfordFmrib03_T2w_labels-disc-manual.nii.gz => sub-oxfordFmrib03_space-other_T2w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-oxfordFmrib03/anat/{sub-oxfordFmrib03_T2w_seg-manual.json => sub-oxfordFmrib03_space-other_T2w_seg-manual.json} (100%) rename derivatives/labels/sub-oxfordFmrib03/anat/{sub-oxfordFmrib03_T2w_seg-manual.nii.gz => sub-oxfordFmrib03_space-other_T2w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-oxfordFmrib04/anat/{sub-oxfordFmrib04_flip-1_mt-on_MTS_seg-manual.json => sub-oxfordFmrib04_flip-1_mt-on_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-oxfordFmrib04/anat/{sub-oxfordFmrib04_flip-1_mt-on_MTS_seg-manual.nii.gz => sub-oxfordFmrib04_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-oxfordFmrib04/anat/{sub-oxfordFmrib04_T2star_seg-manual.json => sub-oxfordFmrib04_flip-2_mt-off_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-oxfordFmrib04/anat/{sub-oxfordFmrib04_flip-2_mt-off_MTS_seg-manual.nii.gz => sub-oxfordFmrib04_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-oxfordFmrib04/anat/{sub-oxfordFmrib04_T1w_labels-disc-manual.json => sub-oxfordFmrib04_space-other_T1w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-oxfordFmrib04/anat/{sub-oxfordFmrib04_T1w_labels-disc-manual.nii.gz => sub-oxfordFmrib04_space-other_T1w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-oxfordFmrib04/anat/{sub-oxfordFmrib04_T1w_seg-manual.json => sub-oxfordFmrib04_space-other_T1w_seg-manual.json} (100%) rename derivatives/labels/sub-oxfordFmrib04/anat/{sub-oxfordFmrib04_T1w_seg-manual.nii.gz => sub-oxfordFmrib04_space-other_T1w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-oxfordFmrib04/anat/{sub-oxfordFmrib04_flip-2_mt-off_MTS_seg-manual.json => sub-oxfordFmrib04_space-other_T2star_seg-manual.json} (100%) rename derivatives/labels/sub-oxfordFmrib04/anat/{sub-oxfordFmrib04_T2star_seg-manual.nii.gz => sub-oxfordFmrib04_space-other_T2star_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-oxfordFmrib04/anat/{sub-oxfordFmrib04_T2w_labels-disc-manual.json => sub-oxfordFmrib04_space-other_T2w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-oxfordFmrib04/anat/{sub-oxfordFmrib04_T2w_labels-disc-manual.nii.gz => sub-oxfordFmrib04_space-other_T2w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-oxfordFmrib04/anat/{sub-oxfordFmrib04_T2w_seg-manual.json => sub-oxfordFmrib04_space-other_T2w_seg-manual.json} (100%) rename derivatives/labels/sub-oxfordFmrib04/anat/{sub-oxfordFmrib04_T2w_seg-manual.nii.gz => sub-oxfordFmrib04_space-other_T2w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-oxfordFmrib05/anat/{sub-oxfordFmrib05_T2star_seg-manual.json => sub-oxfordFmrib05_flip-1_mt-on_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-oxfordFmrib05/anat/{sub-oxfordFmrib05_flip-1_mt-on_MTS_seg-manual.nii.gz => sub-oxfordFmrib05_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-oxfordFmrib05/anat/{sub-oxfordFmrib05_flip-2_mt-off_MTS_seg-manual.json => sub-oxfordFmrib05_flip-2_mt-off_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-oxfordFmrib05/anat/{sub-oxfordFmrib05_flip-2_mt-off_MTS_seg-manual.nii.gz => sub-oxfordFmrib05_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-oxfordFmrib05/anat/{sub-oxfordFmrib05_T1w_RPI_r_labels-manual.nii.gz => sub-oxfordFmrib05_space-other_T1w_RPI_r_labels-manual.nii.gz} (100%) rename derivatives/labels/sub-oxfordFmrib05/anat/{sub-oxfordFmrib05_T1w_labels-disc-manual.json => sub-oxfordFmrib05_space-other_T1w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-oxfordFmrib05/anat/{sub-oxfordFmrib05_T1w_labels-disc-manual.nii.gz => sub-oxfordFmrib05_space-other_T1w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-oxfordFmrib05/anat/{sub-oxfordFmrib05_T1w_seg-manual.json => sub-oxfordFmrib05_space-other_T1w_seg-manual.json} (100%) rename derivatives/labels/sub-oxfordFmrib05/anat/{sub-oxfordFmrib05_T1w_seg-manual.nii.gz => sub-oxfordFmrib05_space-other_T1w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-oxfordFmrib05/anat/{sub-oxfordFmrib05_flip-1_mt-on_MTS_seg-manual.json => sub-oxfordFmrib05_space-other_T2star_seg-manual.json} (100%) rename derivatives/labels/sub-oxfordFmrib05/anat/{sub-oxfordFmrib05_T2star_seg-manual.nii.gz => sub-oxfordFmrib05_space-other_T2star_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-oxfordFmrib05/anat/{sub-oxfordFmrib05_T2w_labels-disc-manual.json => sub-oxfordFmrib05_space-other_T2w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-oxfordFmrib05/anat/{sub-oxfordFmrib05_T2w_labels-disc-manual.nii.gz => sub-oxfordFmrib05_space-other_T2w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-oxfordFmrib05/anat/{sub-oxfordFmrib05_T2w_seg-manual.json => sub-oxfordFmrib05_space-other_T2w_seg-manual.json} (100%) rename derivatives/labels/sub-oxfordFmrib05/anat/{sub-oxfordFmrib05_T2w_seg-manual.nii.gz => sub-oxfordFmrib05_space-other_T2w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-oxfordFmrib06/anat/{sub-oxfordFmrib06_T2star_seg-manual.json => sub-oxfordFmrib06_flip-1_mt-on_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-oxfordFmrib06/anat/{sub-oxfordFmrib06_flip-1_mt-on_MTS_seg-manual.nii.gz => sub-oxfordFmrib06_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-oxfordFmrib06/anat/{sub-oxfordFmrib06_flip-2_mt-off_MTS_seg-manual.json => sub-oxfordFmrib06_flip-2_mt-off_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-oxfordFmrib06/anat/{sub-oxfordFmrib06_flip-2_mt-off_MTS_seg-manual.nii.gz => sub-oxfordFmrib06_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-oxfordFmrib06/anat/{sub-oxfordFmrib06_T1w_RPI_r_labels-manual.nii.gz => sub-oxfordFmrib06_space-other_T1w_RPI_r_labels-manual.nii.gz} (100%) rename derivatives/labels/sub-oxfordFmrib06/anat/{sub-oxfordFmrib06_T1w_labels-disc-manual.json => sub-oxfordFmrib06_space-other_T1w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-oxfordFmrib06/anat/{sub-oxfordFmrib06_T1w_labels-disc-manual.nii.gz => sub-oxfordFmrib06_space-other_T1w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-oxfordFmrib06/anat/{sub-oxfordFmrib06_T1w_seg-manual.json => sub-oxfordFmrib06_space-other_T1w_seg-manual.json} (100%) rename derivatives/labels/sub-oxfordFmrib06/anat/{sub-oxfordFmrib06_T1w_seg-manual.nii.gz => sub-oxfordFmrib06_space-other_T1w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-oxfordFmrib06/anat/{sub-oxfordFmrib06_flip-1_mt-on_MTS_seg-manual.json => sub-oxfordFmrib06_space-other_T2star_seg-manual.json} (100%) rename derivatives/labels/sub-oxfordFmrib06/anat/{sub-oxfordFmrib06_T2star_seg-manual.nii.gz => sub-oxfordFmrib06_space-other_T2star_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-oxfordFmrib06/anat/{sub-oxfordFmrib06_T2w_labels-disc-manual.json => sub-oxfordFmrib06_space-other_T2w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-oxfordFmrib06/anat/{sub-oxfordFmrib06_T2w_labels-disc-manual.nii.gz => sub-oxfordFmrib06_space-other_T2w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-oxfordFmrib06/anat/{sub-oxfordFmrib06_T2w_seg-manual.json => sub-oxfordFmrib06_space-other_T2w_seg-manual.json} (100%) rename derivatives/labels/sub-oxfordFmrib06/anat/{sub-oxfordFmrib06_T2w_seg-manual.nii.gz => sub-oxfordFmrib06_space-other_T2w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-oxfordFmrib07/anat/{sub-oxfordFmrib07_T2star_seg-manual.json => sub-oxfordFmrib07_flip-1_mt-on_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-oxfordFmrib07/anat/{sub-oxfordFmrib07_flip-1_mt-on_MTS_seg-manual.nii.gz => sub-oxfordFmrib07_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-oxfordFmrib07/anat/{sub-oxfordFmrib07_T2w_seg-manual.json => sub-oxfordFmrib07_flip-2_mt-off_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-oxfordFmrib07/anat/{sub-oxfordFmrib07_flip-2_mt-off_MTS_seg-manual.nii.gz => sub-oxfordFmrib07_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-oxfordFmrib07/anat/{sub-oxfordFmrib07_T1w_RPI_r_labels-manual.nii.gz => sub-oxfordFmrib07_space-other_T1w_RPI_r_labels-manual.nii.gz} (100%) rename derivatives/labels/sub-oxfordFmrib07/anat/{sub-oxfordFmrib07_T1w_labels-disc-manual.json => sub-oxfordFmrib07_space-other_T1w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-oxfordFmrib07/anat/{sub-oxfordFmrib07_T1w_labels-disc-manual.nii.gz => sub-oxfordFmrib07_space-other_T1w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-oxfordFmrib07/anat/{sub-oxfordFmrib07_T1w_seg-manual.json => sub-oxfordFmrib07_space-other_T1w_seg-manual.json} (100%) rename derivatives/labels/sub-oxfordFmrib07/anat/{sub-oxfordFmrib07_T1w_seg-manual.nii.gz => sub-oxfordFmrib07_space-other_T1w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-oxfordFmrib07/anat/{sub-oxfordFmrib07_flip-1_mt-on_MTS_seg-manual.json => sub-oxfordFmrib07_space-other_T2star_seg-manual.json} (100%) rename derivatives/labels/sub-oxfordFmrib07/anat/{sub-oxfordFmrib07_T2star_seg-manual.nii.gz => sub-oxfordFmrib07_space-other_T2star_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-oxfordFmrib07/anat/{sub-oxfordFmrib07_T2w_labels-disc-manual.json => sub-oxfordFmrib07_space-other_T2w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-oxfordFmrib07/anat/{sub-oxfordFmrib07_T2w_labels-disc-manual.nii.gz => sub-oxfordFmrib07_space-other_T2w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-oxfordFmrib07/anat/{sub-oxfordFmrib07_flip-2_mt-off_MTS_seg-manual.json => sub-oxfordFmrib07_space-other_T2w_seg-manual.json} (100%) rename derivatives/labels/sub-oxfordFmrib07/anat/{sub-oxfordFmrib07_T2w_seg-manual.nii.gz => sub-oxfordFmrib07_space-other_T2w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-oxfordFmrib08/anat/{sub-oxfordFmrib08_T2star_seg-manual.json => sub-oxfordFmrib08_flip-1_mt-on_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-oxfordFmrib08/anat/{sub-oxfordFmrib08_flip-1_mt-on_MTS_seg-manual.nii.gz => sub-oxfordFmrib08_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-oxfordFmrib08/anat/{sub-oxfordFmrib08_flip-2_mt-off_MTS_seg-manual.json => sub-oxfordFmrib08_flip-2_mt-off_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-oxfordFmrib08/anat/{sub-oxfordFmrib08_flip-2_mt-off_MTS_seg-manual.nii.gz => sub-oxfordFmrib08_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-oxfordFmrib08/anat/{sub-oxfordFmrib08_T1w_labels-disc-manual.json => sub-oxfordFmrib08_space-other_T1w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-oxfordFmrib08/anat/{sub-oxfordFmrib08_T1w_labels-disc-manual.nii.gz => sub-oxfordFmrib08_space-other_T1w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-oxfordFmrib08/anat/{sub-oxfordFmrib08_T1w_seg-manual.json => sub-oxfordFmrib08_space-other_T1w_seg-manual.json} (100%) rename derivatives/labels/sub-oxfordFmrib08/anat/{sub-oxfordFmrib08_T1w_seg-manual.nii.gz => sub-oxfordFmrib08_space-other_T1w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-oxfordFmrib08/anat/{sub-oxfordFmrib08_flip-1_mt-on_MTS_seg-manual.json => sub-oxfordFmrib08_space-other_T2star_seg-manual.json} (100%) rename derivatives/labels/sub-oxfordFmrib08/anat/{sub-oxfordFmrib08_T2star_seg-manual.nii.gz => sub-oxfordFmrib08_space-other_T2star_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-oxfordFmrib08/anat/{sub-oxfordFmrib08_T2w_labels-disc-manual.json => sub-oxfordFmrib08_space-other_T2w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-oxfordFmrib08/anat/{sub-oxfordFmrib08_T2w_labels-disc-manual.nii.gz => sub-oxfordFmrib08_space-other_T2w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-oxfordFmrib08/anat/{sub-oxfordFmrib08_T2w_seg-manual.json => sub-oxfordFmrib08_space-other_T2w_seg-manual.json} (100%) rename derivatives/labels/sub-oxfordFmrib08/anat/{sub-oxfordFmrib08_T2w_seg-manual.nii.gz => sub-oxfordFmrib08_space-other_T2w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-oxfordFmrib09/anat/{sub-oxfordFmrib09_flip-1_mt-on_MTS_seg-manual.json => sub-oxfordFmrib09_flip-1_mt-on_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-oxfordFmrib09/anat/{sub-oxfordFmrib09_flip-1_mt-on_MTS_seg-manual.nii.gz => sub-oxfordFmrib09_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-oxfordFmrib09/anat/{sub-oxfordFmrib09_flip-2_mt-off_MTS_seg-manual.json => sub-oxfordFmrib09_flip-2_mt-off_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-oxfordFmrib09/anat/{sub-oxfordFmrib09_flip-2_mt-off_MTS_seg-manual.nii.gz => sub-oxfordFmrib09_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-oxfordFmrib09/anat/{sub-oxfordFmrib09_T1w_labels-disc-manual.json => sub-oxfordFmrib09_space-other_T1w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-oxfordFmrib09/anat/{sub-oxfordFmrib09_T1w_labels-disc-manual.nii.gz => sub-oxfordFmrib09_space-other_T1w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-oxfordFmrib09/anat/{sub-oxfordFmrib09_T1w_seg-manual.json => sub-oxfordFmrib09_space-other_T1w_seg-manual.json} (100%) rename derivatives/labels/sub-oxfordFmrib09/anat/{sub-oxfordFmrib09_T1w_seg-manual.nii.gz => sub-oxfordFmrib09_space-other_T1w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-oxfordFmrib09/anat/{sub-oxfordFmrib09_T2star_seg-manual.json => sub-oxfordFmrib09_space-other_T2star_seg-manual.json} (100%) rename derivatives/labels/sub-oxfordFmrib09/anat/{sub-oxfordFmrib09_T2star_seg-manual.nii.gz => sub-oxfordFmrib09_space-other_T2star_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-oxfordFmrib09/anat/{sub-oxfordFmrib09_T2w_labels-disc-manual.json => sub-oxfordFmrib09_space-other_T2w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-oxfordFmrib09/anat/{sub-oxfordFmrib09_T2w_labels-disc-manual.nii.gz => sub-oxfordFmrib09_space-other_T2w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-oxfordFmrib09/anat/{sub-oxfordFmrib09_T2w_seg-manual.json => sub-oxfordFmrib09_space-other_T2w_seg-manual.json} (100%) rename derivatives/labels/sub-oxfordFmrib09/anat/{sub-oxfordFmrib09_T2w_seg-manual.nii.gz => sub-oxfordFmrib09_space-other_T2w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-oxfordFmrib10/anat/{sub-oxfordFmrib10_T2star_seg-manual.json => sub-oxfordFmrib10_flip-1_mt-on_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-oxfordFmrib10/anat/{sub-oxfordFmrib10_flip-1_mt-on_MTS_seg-manual.nii.gz => sub-oxfordFmrib10_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-oxfordFmrib10/anat/{sub-oxfordFmrib10_flip-2_mt-off_MTS_seg-manual.json => sub-oxfordFmrib10_flip-2_mt-off_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-oxfordFmrib10/anat/{sub-oxfordFmrib10_flip-2_mt-off_MTS_seg-manual.nii.gz => sub-oxfordFmrib10_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-oxfordFmrib10/anat/{sub-oxfordFmrib10_T1w_labels-disc-manual.json => sub-oxfordFmrib10_space-other_T1w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-oxfordFmrib10/anat/{sub-oxfordFmrib10_T1w_labels-disc-manual.nii.gz => sub-oxfordFmrib10_space-other_T1w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-oxfordFmrib10/anat/{sub-oxfordFmrib10_T1w_seg-manual.json => sub-oxfordFmrib10_space-other_T1w_seg-manual.json} (100%) rename derivatives/labels/sub-oxfordFmrib10/anat/{sub-oxfordFmrib10_T1w_seg-manual.nii.gz => sub-oxfordFmrib10_space-other_T1w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-oxfordFmrib10/anat/{sub-oxfordFmrib10_flip-1_mt-on_MTS_seg-manual.json => sub-oxfordFmrib10_space-other_T2star_seg-manual.json} (100%) rename derivatives/labels/sub-oxfordFmrib10/anat/{sub-oxfordFmrib10_T2star_seg-manual.nii.gz => sub-oxfordFmrib10_space-other_T2star_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-oxfordFmrib10/anat/{sub-oxfordFmrib10_T2w_labels-disc-manual.json => sub-oxfordFmrib10_space-other_T2w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-oxfordFmrib10/anat/{sub-oxfordFmrib10_T2w_labels-disc-manual.nii.gz => sub-oxfordFmrib10_space-other_T2w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-oxfordFmrib10/anat/{sub-oxfordFmrib10_T2w_seg-manual.json => sub-oxfordFmrib10_space-other_T2w_seg-manual.json} (100%) rename derivatives/labels/sub-oxfordFmrib10/anat/{sub-oxfordFmrib10_T2w_seg-manual.nii.gz => sub-oxfordFmrib10_space-other_T2w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-oxfordFmrib11/anat/{sub-oxfordFmrib11_T2star_seg-manual.json => sub-oxfordFmrib11_flip-1_mt-on_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-oxfordFmrib11/anat/{sub-oxfordFmrib11_flip-1_mt-on_MTS_seg-manual.nii.gz => sub-oxfordFmrib11_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-oxfordFmrib11/anat/{sub-oxfordFmrib11_flip-2_mt-off_MTS_seg-manual.json => sub-oxfordFmrib11_flip-2_mt-off_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-oxfordFmrib11/anat/{sub-oxfordFmrib11_flip-2_mt-off_MTS_seg-manual.nii.gz => sub-oxfordFmrib11_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-oxfordFmrib11/anat/{sub-oxfordFmrib11_T1w_labels-disc-manual.json => sub-oxfordFmrib11_space-other_T1w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-oxfordFmrib11/anat/{sub-oxfordFmrib11_T1w_labels-disc-manual.nii.gz => sub-oxfordFmrib11_space-other_T1w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-oxfordFmrib11/anat/{sub-oxfordFmrib11_T1w_seg-manual.json => sub-oxfordFmrib11_space-other_T1w_seg-manual.json} (100%) rename derivatives/labels/sub-oxfordFmrib11/anat/{sub-oxfordFmrib11_T1w_seg-manual.nii.gz => sub-oxfordFmrib11_space-other_T1w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-oxfordFmrib11/anat/{sub-oxfordFmrib11_T2w_seg-manual.json => sub-oxfordFmrib11_space-other_T2star_seg-manual.json} (100%) rename derivatives/labels/sub-oxfordFmrib11/anat/{sub-oxfordFmrib11_T2star_seg-manual.nii.gz => sub-oxfordFmrib11_space-other_T2star_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-oxfordFmrib11/anat/{sub-oxfordFmrib11_T2w_labels-disc-manual.json => sub-oxfordFmrib11_space-other_T2w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-oxfordFmrib11/anat/{sub-oxfordFmrib11_T2w_labels-disc-manual.nii.gz => sub-oxfordFmrib11_space-other_T2w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-oxfordFmrib11/anat/{sub-oxfordFmrib11_flip-1_mt-on_MTS_seg-manual.json => sub-oxfordFmrib11_space-other_T2w_seg-manual.json} (100%) rename derivatives/labels/sub-oxfordFmrib11/anat/{sub-oxfordFmrib11_T2w_seg-manual.nii.gz => sub-oxfordFmrib11_space-other_T2w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-oxfordOhba01/anat/{sub-oxfordOhba01_T2star_seg-manual.json => sub-oxfordOhba01_flip-1_mt-on_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-oxfordOhba01/anat/{sub-oxfordOhba01_flip-1_mt-on_MTS_seg-manual.nii.gz => sub-oxfordOhba01_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-oxfordOhba01/anat/{sub-oxfordOhba01_flip-2_mt-off_MTS_seg-manual.json => sub-oxfordOhba01_flip-2_mt-off_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-oxfordOhba01/anat/{sub-oxfordOhba01_flip-2_mt-off_MTS_seg-manual.nii.gz => sub-oxfordOhba01_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-oxfordOhba01/anat/{sub-oxfordOhba01_T1w_labels-disc-manual.json => sub-oxfordOhba01_space-other_T1w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-oxfordOhba01/anat/{sub-oxfordOhba01_T1w_labels-disc-manual.nii.gz => sub-oxfordOhba01_space-other_T1w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-oxfordOhba01/anat/{sub-oxfordOhba01_T1w_seg-manual.json => sub-oxfordOhba01_space-other_T1w_seg-manual.json} (100%) rename derivatives/labels/sub-oxfordOhba01/anat/{sub-oxfordOhba01_T1w_seg-manual.nii.gz => sub-oxfordOhba01_space-other_T1w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-oxfordOhba01/anat/{sub-oxfordOhba01_T2w_seg-manual.json => sub-oxfordOhba01_space-other_T2star_seg-manual.json} (100%) rename derivatives/labels/sub-oxfordOhba01/anat/{sub-oxfordOhba01_T2star_seg-manual.nii.gz => sub-oxfordOhba01_space-other_T2star_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-oxfordOhba01/anat/{sub-oxfordOhba01_T2w_labels-disc-manual.json => sub-oxfordOhba01_space-other_T2w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-oxfordOhba01/anat/{sub-oxfordOhba01_T2w_labels-disc-manual.nii.gz => sub-oxfordOhba01_space-other_T2w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-oxfordOhba01/anat/{sub-oxfordOhba01_flip-1_mt-on_MTS_seg-manual.json => sub-oxfordOhba01_space-other_T2w_seg-manual.json} (100%) rename derivatives/labels/sub-oxfordOhba01/anat/{sub-oxfordOhba01_T2w_seg-manual.nii.gz => sub-oxfordOhba01_space-other_T2w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-oxfordOhba02/anat/{sub-oxfordOhba02_T2star_seg-manual.json => sub-oxfordOhba02_flip-1_mt-on_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-oxfordOhba02/anat/{sub-oxfordOhba02_flip-1_mt-on_MTS_seg-manual.nii.gz => sub-oxfordOhba02_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-oxfordOhba02/anat/{sub-oxfordOhba02_flip-2_mt-off_MTS_seg-manual.json => sub-oxfordOhba02_flip-2_mt-off_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-oxfordOhba02/anat/{sub-oxfordOhba02_flip-2_mt-off_MTS_seg-manual.nii.gz => sub-oxfordOhba02_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-oxfordOhba02/anat/{sub-oxfordOhba02_T1w_labels-disc-manual.json => sub-oxfordOhba02_space-other_T1w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-oxfordOhba02/anat/{sub-oxfordOhba02_T1w_labels-disc-manual.nii.gz => sub-oxfordOhba02_space-other_T1w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-oxfordOhba02/anat/{sub-oxfordOhba02_T1w_seg-manual.json => sub-oxfordOhba02_space-other_T1w_seg-manual.json} (100%) rename derivatives/labels/sub-oxfordOhba02/anat/{sub-oxfordOhba02_T1w_seg-manual.nii.gz => sub-oxfordOhba02_space-other_T1w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-oxfordOhba02/anat/{sub-oxfordOhba02_flip-1_mt-on_MTS_seg-manual.json => sub-oxfordOhba02_space-other_T2star_seg-manual.json} (100%) rename derivatives/labels/sub-oxfordOhba02/anat/{sub-oxfordOhba02_T2star_seg-manual.nii.gz => sub-oxfordOhba02_space-other_T2star_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-oxfordOhba02/anat/{sub-oxfordOhba02_T2w_labels-disc-manual.json => sub-oxfordOhba02_space-other_T2w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-oxfordOhba02/anat/{sub-oxfordOhba02_T2w_labels-disc-manual.nii.gz => sub-oxfordOhba02_space-other_T2w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-oxfordOhba02/anat/{sub-oxfordOhba02_T2w_seg-manual.json => sub-oxfordOhba02_space-other_T2w_seg-manual.json} (100%) rename derivatives/labels/sub-oxfordOhba02/anat/{sub-oxfordOhba02_T2w_seg-manual.nii.gz => sub-oxfordOhba02_space-other_T2w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-oxfordOhba03/anat/{sub-oxfordOhba03_T2star_seg-manual.json => sub-oxfordOhba03_flip-1_mt-on_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-oxfordOhba03/anat/{sub-oxfordOhba03_flip-1_mt-on_MTS_seg-manual.nii.gz => sub-oxfordOhba03_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-oxfordOhba03/anat/{sub-oxfordOhba03_flip-2_mt-off_MTS_seg-manual.json => sub-oxfordOhba03_flip-2_mt-off_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-oxfordOhba03/anat/{sub-oxfordOhba03_flip-2_mt-off_MTS_seg-manual.nii.gz => sub-oxfordOhba03_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-oxfordOhba03/anat/{sub-oxfordOhba03_T1w_labels-disc-manual.json => sub-oxfordOhba03_space-other_T1w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-oxfordOhba03/anat/{sub-oxfordOhba03_T1w_labels-disc-manual.nii.gz => sub-oxfordOhba03_space-other_T1w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-oxfordOhba03/anat/{sub-oxfordOhba03_T1w_seg-manual.json => sub-oxfordOhba03_space-other_T1w_seg-manual.json} (100%) rename derivatives/labels/sub-oxfordOhba03/anat/{sub-oxfordOhba03_T1w_seg-manual.nii.gz => sub-oxfordOhba03_space-other_T1w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-oxfordOhba03/anat/{sub-oxfordOhba03_T2w_seg-manual.json => sub-oxfordOhba03_space-other_T2star_seg-manual.json} (100%) rename derivatives/labels/sub-oxfordOhba03/anat/{sub-oxfordOhba03_T2star_seg-manual.nii.gz => sub-oxfordOhba03_space-other_T2star_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-oxfordOhba03/anat/{sub-oxfordOhba03_T2w_labels-disc-manual.json => sub-oxfordOhba03_space-other_T2w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-oxfordOhba03/anat/{sub-oxfordOhba03_T2w_labels-disc-manual.nii.gz => sub-oxfordOhba03_space-other_T2w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-oxfordOhba03/anat/{sub-oxfordOhba03_flip-1_mt-on_MTS_seg-manual.json => sub-oxfordOhba03_space-other_T2w_seg-manual.json} (100%) rename derivatives/labels/sub-oxfordOhba03/anat/{sub-oxfordOhba03_T2w_seg-manual.nii.gz => sub-oxfordOhba03_space-other_T2w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-oxfordOhba04/anat/{sub-oxfordOhba04_flip-1_mt-on_MTS_seg-manual.json => sub-oxfordOhba04_flip-1_mt-on_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-oxfordOhba04/anat/{sub-oxfordOhba04_flip-1_mt-on_MTS_seg-manual.nii.gz => sub-oxfordOhba04_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-oxfordOhba04/anat/{sub-oxfordOhba04_T2star_seg-manual.json => sub-oxfordOhba04_flip-2_mt-off_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-oxfordOhba04/anat/{sub-oxfordOhba04_flip-2_mt-off_MTS_seg-manual.nii.gz => sub-oxfordOhba04_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-oxfordOhba04/anat/{sub-oxfordOhba04_T1w_labels-disc-manual.json => sub-oxfordOhba04_space-other_T1w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-oxfordOhba04/anat/{sub-oxfordOhba04_T1w_labels-disc-manual.nii.gz => sub-oxfordOhba04_space-other_T1w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-oxfordOhba04/anat/{sub-oxfordOhba04_T1w_seg-manual.json => sub-oxfordOhba04_space-other_T1w_seg-manual.json} (100%) rename derivatives/labels/sub-oxfordOhba04/anat/{sub-oxfordOhba04_T1w_seg-manual.nii.gz => sub-oxfordOhba04_space-other_T1w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-oxfordOhba04/anat/{sub-oxfordOhba04_flip-2_mt-off_MTS_seg-manual.json => sub-oxfordOhba04_space-other_T2star_seg-manual.json} (100%) rename derivatives/labels/sub-oxfordOhba04/anat/{sub-oxfordOhba04_T2star_seg-manual.nii.gz => sub-oxfordOhba04_space-other_T2star_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-oxfordOhba04/anat/{sub-oxfordOhba04_T2w_labels-disc-manual.json => sub-oxfordOhba04_space-other_T2w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-oxfordOhba04/anat/{sub-oxfordOhba04_T2w_labels-disc-manual.nii.gz => sub-oxfordOhba04_space-other_T2w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-oxfordOhba04/anat/{sub-oxfordOhba04_T2w_seg-manual.json => sub-oxfordOhba04_space-other_T2w_seg-manual.json} (100%) rename derivatives/labels/sub-oxfordOhba04/anat/{sub-oxfordOhba04_T2w_seg-manual.nii.gz => sub-oxfordOhba04_space-other_T2w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-oxfordOhba05/anat/{sub-oxfordOhba05_T2star_seg-manual.json => sub-oxfordOhba05_flip-1_mt-on_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-oxfordOhba05/anat/{sub-oxfordOhba05_flip-1_mt-on_MTS_seg-manual.nii.gz => sub-oxfordOhba05_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-oxfordOhba05/anat/{sub-oxfordOhba05_flip-2_mt-off_MTS_seg-manual.json => sub-oxfordOhba05_flip-2_mt-off_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-oxfordOhba05/anat/{sub-oxfordOhba05_flip-2_mt-off_MTS_seg-manual.nii.gz => sub-oxfordOhba05_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-oxfordOhba05/anat/{sub-oxfordOhba05_T1w_RPI_r_labels-manual.nii.gz => sub-oxfordOhba05_space-other_T1w_RPI_r_labels-manual.nii.gz} (100%) rename derivatives/labels/sub-oxfordOhba05/anat/{sub-oxfordOhba05_T1w_labels-disc-manual.json => sub-oxfordOhba05_space-other_T1w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-oxfordOhba05/anat/{sub-oxfordOhba05_T1w_labels-disc-manual.nii.gz => sub-oxfordOhba05_space-other_T1w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-oxfordOhba05/anat/{sub-oxfordOhba05_T1w_seg-manual.json => sub-oxfordOhba05_space-other_T1w_seg-manual.json} (100%) rename derivatives/labels/sub-oxfordOhba05/anat/{sub-oxfordOhba05_T1w_seg-manual.nii.gz => sub-oxfordOhba05_space-other_T1w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-oxfordOhba05/anat/{sub-oxfordOhba05_flip-1_mt-on_MTS_seg-manual.json => sub-oxfordOhba05_space-other_T2star_seg-manual.json} (100%) rename derivatives/labels/sub-oxfordOhba05/anat/{sub-oxfordOhba05_T2star_seg-manual.nii.gz => sub-oxfordOhba05_space-other_T2star_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-oxfordOhba05/anat/{sub-oxfordOhba05_T2w_labels-disc-manual.json => sub-oxfordOhba05_space-other_T2w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-oxfordOhba05/anat/{sub-oxfordOhba05_T2w_labels-disc-manual.nii.gz => sub-oxfordOhba05_space-other_T2w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-oxfordOhba05/anat/{sub-oxfordOhba05_T2w_seg-manual.json => sub-oxfordOhba05_space-other_T2w_seg-manual.json} (100%) rename derivatives/labels/sub-oxfordOhba05/anat/{sub-oxfordOhba05_T2w_seg-manual.nii.gz => sub-oxfordOhba05_space-other_T2w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-pavia01/anat/{sub-pavia01_flip-1_mt-on_MTS_seg-manual.json => sub-pavia01_flip-1_mt-on_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-pavia01/anat/{sub-pavia01_flip-1_mt-on_MTS_seg-manual.nii.gz => sub-pavia01_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-pavia01/anat/{sub-pavia01_T2star_seg-manual.json => sub-pavia01_flip-2_mt-off_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-pavia01/anat/{sub-pavia01_flip-2_mt-off_MTS_seg-manual.nii.gz => sub-pavia01_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-pavia01/anat/{sub-pavia01_T1w_labels-disc-manual.json => sub-pavia01_space-other_T1w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-pavia01/anat/{sub-pavia01_T1w_labels-disc-manual.nii.gz => sub-pavia01_space-other_T1w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-pavia01/anat/{sub-pavia01_T1w_seg-manual.json => sub-pavia01_space-other_T1w_seg-manual.json} (100%) rename derivatives/labels/sub-pavia01/anat/{sub-pavia01_T1w_seg-manual.nii.gz => sub-pavia01_space-other_T1w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-pavia01/anat/{sub-pavia01_flip-2_mt-off_MTS_seg-manual.json => sub-pavia01_space-other_T2star_seg-manual.json} (100%) rename derivatives/labels/sub-pavia01/anat/{sub-pavia01_T2star_seg-manual.nii.gz => sub-pavia01_space-other_T2star_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-pavia01/anat/{sub-pavia01_T2w_labels-disc-manual.json => sub-pavia01_space-other_T2w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-pavia01/anat/{sub-pavia01_T2w_labels-disc-manual.nii.gz => sub-pavia01_space-other_T2w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-pavia01/anat/{sub-pavia01_T2w_seg-manual.json => sub-pavia01_space-other_T2w_seg-manual.json} (100%) rename derivatives/labels/sub-pavia01/anat/{sub-pavia01_T2w_seg-manual.nii.gz => sub-pavia01_space-other_T2w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-pavia02/anat/{sub-pavia02_T2star_seg-manual.json => sub-pavia02_flip-1_mt-on_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-pavia02/anat/{sub-pavia02_flip-1_mt-on_MTS_seg-manual.nii.gz => sub-pavia02_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-pavia02/anat/{sub-pavia02_flip-2_mt-off_MTS_seg-manual.json => sub-pavia02_flip-2_mt-off_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-pavia02/anat/{sub-pavia02_flip-2_mt-off_MTS_seg-manual.nii.gz => sub-pavia02_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-pavia02/anat/{sub-pavia02_T1w_labels-disc-manual.json => sub-pavia02_space-other_T1w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-pavia02/anat/{sub-pavia02_T1w_labels-disc-manual.nii.gz => sub-pavia02_space-other_T1w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-pavia02/anat/{sub-pavia02_T1w_seg-manual.json => sub-pavia02_space-other_T1w_seg-manual.json} (100%) rename derivatives/labels/sub-pavia02/anat/{sub-pavia02_T1w_seg-manual.nii.gz => sub-pavia02_space-other_T1w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-pavia02/anat/{sub-pavia02_flip-1_mt-on_MTS_seg-manual.json => sub-pavia02_space-other_T2star_seg-manual.json} (100%) rename derivatives/labels/sub-pavia02/anat/{sub-pavia02_T2star_seg-manual.nii.gz => sub-pavia02_space-other_T2star_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-pavia02/anat/{sub-pavia02_T2w_labels-disc-manual.json => sub-pavia02_space-other_T2w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-pavia02/anat/{sub-pavia02_T2w_labels-disc-manual.nii.gz => sub-pavia02_space-other_T2w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-pavia02/anat/{sub-pavia02_T2w_seg-manual.json => sub-pavia02_space-other_T2w_seg-manual.json} (100%) rename derivatives/labels/sub-pavia02/anat/{sub-pavia02_T2w_seg-manual.nii.gz => sub-pavia02_space-other_T2w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-pavia03/anat/{sub-pavia03_T2star_seg-manual.json => sub-pavia03_flip-1_mt-on_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-pavia03/anat/{sub-pavia03_flip-1_mt-on_MTS_seg-manual.nii.gz => sub-pavia03_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-pavia03/anat/{sub-pavia03_flip-2_mt-off_MTS_seg-manual.json => sub-pavia03_flip-2_mt-off_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-pavia03/anat/{sub-pavia03_flip-2_mt-off_MTS_seg-manual.nii.gz => sub-pavia03_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-pavia03/anat/{sub-pavia03_T1w_RPI_r_labels-manual.nii.gz => sub-pavia03_space-other_T1w_RPI_r_labels-manual.nii.gz} (100%) rename derivatives/labels/sub-pavia03/anat/{sub-pavia03_T1w_labels-disc-manual.json => sub-pavia03_space-other_T1w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-pavia03/anat/{sub-pavia03_T1w_labels-disc-manual.nii.gz => sub-pavia03_space-other_T1w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-pavia03/anat/{sub-pavia03_T1w_seg-manual.json => sub-pavia03_space-other_T1w_seg-manual.json} (100%) rename derivatives/labels/sub-pavia03/anat/{sub-pavia03_T1w_seg-manual.nii.gz => sub-pavia03_space-other_T1w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-pavia03/anat/{sub-pavia03_flip-1_mt-on_MTS_seg-manual.json => sub-pavia03_space-other_T2star_seg-manual.json} (100%) rename derivatives/labels/sub-pavia03/anat/{sub-pavia03_T2star_seg-manual.nii.gz => sub-pavia03_space-other_T2star_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-pavia03/anat/{sub-pavia03_T2w_labels-disc-manual.json => sub-pavia03_space-other_T2w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-pavia03/anat/{sub-pavia03_T2w_labels-disc-manual.nii.gz => sub-pavia03_space-other_T2w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-pavia03/anat/{sub-pavia03_T2w_seg-manual.json => sub-pavia03_space-other_T2w_seg-manual.json} (100%) rename derivatives/labels/sub-pavia03/anat/{sub-pavia03_T2w_seg-manual.nii.gz => sub-pavia03_space-other_T2w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-pavia04/anat/{sub-pavia04_T2w_seg-manual.json => sub-pavia04_flip-1_mt-on_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-pavia04/anat/{sub-pavia04_flip-1_mt-on_MTS_seg-manual.nii.gz => sub-pavia04_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-pavia04/anat/{sub-pavia04_flip-2_mt-off_MTS_seg-manual.json => sub-pavia04_flip-2_mt-off_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-pavia04/anat/{sub-pavia04_flip-2_mt-off_MTS_seg-manual.nii.gz => sub-pavia04_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-pavia04/anat/{sub-pavia04_T1w_labels-disc-manual.json => sub-pavia04_space-other_T1w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-pavia04/anat/{sub-pavia04_T1w_labels-disc-manual.nii.gz => sub-pavia04_space-other_T1w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-pavia04/anat/{sub-pavia04_T1w_seg-manual.json => sub-pavia04_space-other_T1w_seg-manual.json} (100%) rename derivatives/labels/sub-pavia04/anat/{sub-pavia04_T1w_seg-manual.nii.gz => sub-pavia04_space-other_T1w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-pavia04/anat/{sub-pavia04_T2star_seg-manual.json => sub-pavia04_space-other_T2star_seg-manual.json} (100%) rename derivatives/labels/sub-pavia04/anat/{sub-pavia04_T2star_seg-manual.nii.gz => sub-pavia04_space-other_T2star_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-pavia04/anat/{sub-pavia04_T2w_csfseg-manual.json => sub-pavia04_space-other_T2w_csfseg-manual.json} (100%) rename derivatives/labels/sub-pavia04/anat/{sub-pavia04_T2w_csfseg-manual.nii.gz => sub-pavia04_space-other_T2w_csfseg-manual.nii.gz} (100%) rename derivatives/labels/sub-pavia04/anat/{sub-pavia04_T2w_labels-disc-manual.json => sub-pavia04_space-other_T2w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-pavia04/anat/{sub-pavia04_T2w_labels-disc-manual.nii.gz => sub-pavia04_space-other_T2w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-pavia04/anat/{sub-pavia04_flip-1_mt-on_MTS_seg-manual.json => sub-pavia04_space-other_T2w_seg-manual.json} (100%) rename derivatives/labels/sub-pavia04/anat/{sub-pavia04_T2w_seg-manual.nii.gz => sub-pavia04_space-other_T2w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-pavia05/anat/{sub-pavia05_T2star_seg-manual.json => sub-pavia05_flip-1_mt-on_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-pavia05/anat/{sub-pavia05_flip-1_mt-on_MTS_seg-manual.nii.gz => sub-pavia05_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-pavia05/anat/{sub-pavia05_flip-2_mt-off_MTS_seg-manual.json => sub-pavia05_flip-2_mt-off_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-pavia05/anat/{sub-pavia05_flip-2_mt-off_MTS_seg-manual.nii.gz => sub-pavia05_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-pavia05/anat/{sub-pavia05_T1w_labels-disc-manual.json => sub-pavia05_space-other_T1w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-pavia05/anat/{sub-pavia05_T1w_labels-disc-manual.nii.gz => sub-pavia05_space-other_T1w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-pavia05/anat/{sub-pavia05_T1w_seg-manual.json => sub-pavia05_space-other_T1w_seg-manual.json} (100%) rename derivatives/labels/sub-pavia05/anat/{sub-pavia05_T1w_seg-manual.nii.gz => sub-pavia05_space-other_T1w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-pavia05/anat/{sub-pavia05_flip-1_mt-on_MTS_seg-manual.json => sub-pavia05_space-other_T2star_seg-manual.json} (100%) rename derivatives/labels/sub-pavia05/anat/{sub-pavia05_T2star_seg-manual.nii.gz => sub-pavia05_space-other_T2star_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-pavia05/anat/{sub-pavia05_T2w_labels-disc-manual.json => sub-pavia05_space-other_T2w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-pavia05/anat/{sub-pavia05_T2w_labels-disc-manual.nii.gz => sub-pavia05_space-other_T2w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-pavia05/anat/{sub-pavia05_T2w_seg-manual.json => sub-pavia05_space-other_T2w_seg-manual.json} (100%) rename derivatives/labels/sub-pavia05/anat/{sub-pavia05_T2w_seg-manual.nii.gz => sub-pavia05_space-other_T2w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-pavia06/anat/{sub-pavia06_flip-1_mt-on_MTS_seg-manual.json => sub-pavia06_flip-1_mt-on_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-pavia06/anat/{sub-pavia06_flip-1_mt-on_MTS_seg-manual.nii.gz => sub-pavia06_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-pavia06/anat/{sub-pavia06_flip-2_mt-off_MTS_seg-manual.json => sub-pavia06_flip-2_mt-off_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-pavia06/anat/{sub-pavia06_flip-2_mt-off_MTS_seg-manual.nii.gz => sub-pavia06_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-pavia06/anat/{sub-pavia06_T1w_labels-disc-manual.json => sub-pavia06_space-other_T1w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-pavia06/anat/{sub-pavia06_T1w_labels-disc-manual.nii.gz => sub-pavia06_space-other_T1w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-pavia06/anat/{sub-pavia06_T1w_seg-manual.json => sub-pavia06_space-other_T1w_seg-manual.json} (100%) rename derivatives/labels/sub-pavia06/anat/{sub-pavia06_T1w_seg-manual.nii.gz => sub-pavia06_space-other_T1w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-pavia06/anat/{sub-pavia06_T2star_seg-manual.json => sub-pavia06_space-other_T2star_seg-manual.json} (100%) rename derivatives/labels/sub-pavia06/anat/{sub-pavia06_T2star_seg-manual.nii.gz => sub-pavia06_space-other_T2star_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-pavia06/anat/{sub-pavia06_T2w_labels-disc-manual.json => sub-pavia06_space-other_T2w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-pavia06/anat/{sub-pavia06_T2w_labels-disc-manual.nii.gz => sub-pavia06_space-other_T2w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-pavia06/anat/{sub-pavia06_T2w_seg-manual.json => sub-pavia06_space-other_T2w_seg-manual.json} (100%) rename derivatives/labels/sub-pavia06/anat/{sub-pavia06_T2w_seg-manual.nii.gz => sub-pavia06_space-other_T2w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-perform01/anat/{sub-perform01_flip-1_mt-on_MTS_seg-manual.json => sub-perform01_flip-1_mt-on_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-perform01/anat/{sub-perform01_flip-1_mt-on_MTS_seg-manual.nii.gz => sub-perform01_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-perform01/anat/{sub-perform01_flip-2_mt-off_MTS_seg-manual.json => sub-perform01_flip-2_mt-off_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-perform01/anat/{sub-perform01_flip-2_mt-off_MTS_seg-manual.nii.gz => sub-perform01_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-perform01/anat/{sub-perform01_T1w_labels-disc-manual.json => sub-perform01_space-other_T1w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-perform01/anat/{sub-perform01_T1w_labels-disc-manual.nii.gz => sub-perform01_space-other_T1w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-perform01/anat/{sub-perform01_T1w_seg-manual.json => sub-perform01_space-other_T1w_seg-manual.json} (100%) rename derivatives/labels/sub-perform01/anat/{sub-perform01_T1w_seg-manual.nii.gz => sub-perform01_space-other_T1w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-perform01/anat/{sub-perform01_T2star_seg-manual.json => sub-perform01_space-other_T2star_seg-manual.json} (100%) rename derivatives/labels/sub-perform01/anat/{sub-perform01_T2star_seg-manual.nii.gz => sub-perform01_space-other_T2star_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-perform01/anat/{sub-perform01_T2w_labels-disc-manual.json => sub-perform01_space-other_T2w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-perform01/anat/{sub-perform01_T2w_labels-disc-manual.nii.gz => sub-perform01_space-other_T2w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-perform01/anat/{sub-perform01_T2w_seg-manual.json => sub-perform01_space-other_T2w_seg-manual.json} (100%) rename derivatives/labels/sub-perform01/anat/{sub-perform01_T2w_seg-manual.nii.gz => sub-perform01_space-other_T2w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-perform02/anat/{sub-perform02_flip-1_mt-on_MTS_seg-manual.json => sub-perform02_flip-1_mt-on_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-perform02/anat/{sub-perform02_flip-1_mt-on_MTS_seg-manual.nii.gz => sub-perform02_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-perform02/anat/{sub-perform02_flip-2_mt-off_MTS_seg-manual.json => sub-perform02_flip-2_mt-off_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-perform02/anat/{sub-perform02_flip-2_mt-off_MTS_seg-manual.nii.gz => sub-perform02_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-perform02/anat/{sub-perform02_T1w_labels-disc-manual.json => sub-perform02_space-other_T1w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-perform02/anat/{sub-perform02_T1w_labels-disc-manual.nii.gz => sub-perform02_space-other_T1w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-perform02/anat/{sub-perform02_T1w_seg-manual.json => sub-perform02_space-other_T1w_seg-manual.json} (100%) rename derivatives/labels/sub-perform02/anat/{sub-perform02_T1w_seg-manual.nii.gz => sub-perform02_space-other_T1w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-perform02/anat/{sub-perform02_T2star_seg-manual.json => sub-perform02_space-other_T2star_seg-manual.json} (100%) rename derivatives/labels/sub-perform02/anat/{sub-perform02_T2star_seg-manual.nii.gz => sub-perform02_space-other_T2star_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-perform02/anat/{sub-perform02_T2w_csfseg-manual.json => sub-perform02_space-other_T2w_csfseg-manual.json} (100%) rename derivatives/labels/sub-perform02/anat/{sub-perform02_T2w_csfseg-manual.nii.gz => sub-perform02_space-other_T2w_csfseg-manual.nii.gz} (100%) rename derivatives/labels/sub-perform02/anat/{sub-perform02_T2w_labels-disc-manual.json => sub-perform02_space-other_T2w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-perform02/anat/{sub-perform02_T2w_labels-disc-manual.nii.gz => sub-perform02_space-other_T2w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-perform02/anat/{sub-perform02_T2w_seg-manual.json => sub-perform02_space-other_T2w_seg-manual.json} (100%) rename derivatives/labels/sub-perform02/anat/{sub-perform02_T2w_seg-manual.nii.gz => sub-perform02_space-other_T2w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-perform03/anat/{sub-perform03_flip-1_mt-on_MTS_seg-manual.json => sub-perform03_flip-1_mt-on_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-perform03/anat/{sub-perform03_flip-1_mt-on_MTS_seg-manual.nii.gz => sub-perform03_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-perform03/anat/{sub-perform03_flip-2_mt-off_MTS_seg-manual.json => sub-perform03_flip-2_mt-off_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-perform03/anat/{sub-perform03_flip-2_mt-off_MTS_seg-manual.nii.gz => sub-perform03_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-perform03/anat/{sub-perform03_T1w_labels-disc-manual.json => sub-perform03_space-other_T1w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-perform03/anat/{sub-perform03_T1w_labels-disc-manual.nii.gz => sub-perform03_space-other_T1w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-perform03/anat/{sub-perform03_T1w_seg-manual.json => sub-perform03_space-other_T1w_seg-manual.json} (100%) rename derivatives/labels/sub-perform03/anat/{sub-perform03_T1w_seg-manual.nii.gz => sub-perform03_space-other_T1w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-perform03/anat/{sub-perform03_T2star_seg-manual.json => sub-perform03_space-other_T2star_seg-manual.json} (100%) rename derivatives/labels/sub-perform03/anat/{sub-perform03_T2star_seg-manual.nii.gz => sub-perform03_space-other_T2star_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-perform03/anat/{sub-perform03_T2w_labels-disc-manual.json => sub-perform03_space-other_T2w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-perform03/anat/{sub-perform03_T2w_labels-disc-manual.nii.gz => sub-perform03_space-other_T2w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-perform03/anat/{sub-perform03_T2w_seg-manual.json => sub-perform03_space-other_T2w_seg-manual.json} (100%) rename derivatives/labels/sub-perform03/anat/{sub-perform03_T2w_seg-manual.nii.gz => sub-perform03_space-other_T2w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-perform04/anat/{sub-perform04_T2star_seg-manual.json => sub-perform04_flip-1_mt-on_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-perform04/anat/{sub-perform04_flip-1_mt-on_MTS_seg-manual.nii.gz => sub-perform04_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-perform04/anat/{sub-perform04_flip-2_mt-off_MTS_seg-manual.json => sub-perform04_flip-2_mt-off_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-perform04/anat/{sub-perform04_flip-2_mt-off_MTS_seg-manual.nii.gz => sub-perform04_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-perform04/anat/{sub-perform04_T1w_labels-disc-manual.json => sub-perform04_space-other_T1w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-perform04/anat/{sub-perform04_T1w_labels-disc-manual.nii.gz => sub-perform04_space-other_T1w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-perform04/anat/{sub-perform04_T1w_seg-manual.json => sub-perform04_space-other_T1w_seg-manual.json} (100%) rename derivatives/labels/sub-perform04/anat/{sub-perform04_T1w_seg-manual.nii.gz => sub-perform04_space-other_T1w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-perform04/anat/{sub-perform04_flip-1_mt-on_MTS_seg-manual.json => sub-perform04_space-other_T2star_seg-manual.json} (100%) rename derivatives/labels/sub-perform04/anat/{sub-perform04_T2star_seg-manual.nii.gz => sub-perform04_space-other_T2star_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-perform04/anat/{sub-perform04_T2w_labels-disc-manual.json => sub-perform04_space-other_T2w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-perform04/anat/{sub-perform04_T2w_labels-disc-manual.nii.gz => sub-perform04_space-other_T2w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-perform04/anat/{sub-perform04_T2w_seg-manual.json => sub-perform04_space-other_T2w_seg-manual.json} (100%) rename derivatives/labels/sub-perform04/anat/{sub-perform04_T2w_seg-manual.nii.gz => sub-perform04_space-other_T2w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-perform05/anat/{sub-perform05_T2star_seg-manual.json => sub-perform05_flip-1_mt-on_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-perform05/anat/{sub-perform05_flip-1_mt-on_MTS_seg-manual.nii.gz => sub-perform05_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-perform05/anat/{sub-perform05_T2w_seg-manual.json => sub-perform05_flip-2_mt-off_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-perform05/anat/{sub-perform05_flip-2_mt-off_MTS_seg-manual.nii.gz => sub-perform05_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-perform05/anat/{sub-perform05_T1w_labels-disc-manual.json => sub-perform05_space-other_T1w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-perform05/anat/{sub-perform05_T1w_labels-disc-manual.nii.gz => sub-perform05_space-other_T1w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-perform05/anat/{sub-perform05_T1w_seg-manual.json => sub-perform05_space-other_T1w_seg-manual.json} (100%) rename derivatives/labels/sub-perform05/anat/{sub-perform05_T1w_seg-manual.nii.gz => sub-perform05_space-other_T1w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-perform05/anat/{sub-perform05_flip-1_mt-on_MTS_seg-manual.json => sub-perform05_space-other_T2star_seg-manual.json} (100%) rename derivatives/labels/sub-perform05/anat/{sub-perform05_T2star_seg-manual.nii.gz => sub-perform05_space-other_T2star_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-perform05/anat/{sub-perform05_T2w_labels-disc-manual.json => sub-perform05_space-other_T2w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-perform05/anat/{sub-perform05_T2w_labels-disc-manual.nii.gz => sub-perform05_space-other_T2w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-perform05/anat/{sub-perform05_flip-2_mt-off_MTS_seg-manual.json => sub-perform05_space-other_T2w_seg-manual.json} (100%) rename derivatives/labels/sub-perform05/anat/{sub-perform05_T2w_seg-manual.nii.gz => sub-perform05_space-other_T2w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-perform06/anat/{sub-perform06_flip-1_mt-on_MTS_seg-manual.json => sub-perform06_flip-1_mt-on_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-perform06/anat/{sub-perform06_flip-1_mt-on_MTS_seg-manual.nii.gz => sub-perform06_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-perform06/anat/{sub-perform06_flip-2_mt-off_MTS_seg-manual.json => sub-perform06_flip-2_mt-off_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-perform06/anat/{sub-perform06_flip-2_mt-off_MTS_seg-manual.nii.gz => sub-perform06_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-perform06/anat/{sub-perform06_T1w_RPI_r_labels-manual.nii.gz => sub-perform06_space-other_T1w_RPI_r_labels-manual.nii.gz} (100%) rename derivatives/labels/sub-perform06/anat/{sub-perform06_T1w_labels-disc-manual.json => sub-perform06_space-other_T1w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-perform06/anat/{sub-perform06_T1w_labels-disc-manual.nii.gz => sub-perform06_space-other_T1w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-perform06/anat/{sub-perform06_T1w_seg-manual.json => sub-perform06_space-other_T1w_seg-manual.json} (100%) rename derivatives/labels/sub-perform06/anat/{sub-perform06_T1w_seg-manual.nii.gz => sub-perform06_space-other_T1w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-perform06/anat/{sub-perform06_T2star_seg-manual.json => sub-perform06_space-other_T2star_seg-manual.json} (100%) rename derivatives/labels/sub-perform06/anat/{sub-perform06_T2star_seg-manual.nii.gz => sub-perform06_space-other_T2star_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-perform06/anat/{sub-perform06_T2w_labels-disc-manual.json => sub-perform06_space-other_T2w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-perform06/anat/{sub-perform06_T2w_labels-disc-manual.nii.gz => sub-perform06_space-other_T2w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-perform06/anat/{sub-perform06_T2w_seg-manual.json => sub-perform06_space-other_T2w_seg-manual.json} (100%) rename derivatives/labels/sub-perform06/anat/{sub-perform06_T2w_seg-manual.nii.gz => sub-perform06_space-other_T2w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-queensland01/anat/{sub-queensland01_flip-1_mt-on_MTS_seg-manual.json => sub-queensland01_flip-1_mt-on_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-queensland01/anat/{sub-queensland01_flip-1_mt-on_MTS_seg-manual.nii.gz => sub-queensland01_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-queensland01/anat/{sub-queensland01_flip-2_mt-off_MTS_seg-manual.json => sub-queensland01_flip-2_mt-off_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-queensland01/anat/{sub-queensland01_flip-2_mt-off_MTS_seg-manual.nii.gz => sub-queensland01_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-queensland01/anat/{sub-queensland01_T1w_labels-disc-manual.json => sub-queensland01_space-other_T1w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-queensland01/anat/{sub-queensland01_T1w_labels-disc-manual.nii.gz => sub-queensland01_space-other_T1w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-queensland01/anat/{sub-queensland01_T1w_seg-manual.json => sub-queensland01_space-other_T1w_seg-manual.json} (100%) rename derivatives/labels/sub-queensland01/anat/{sub-queensland01_T1w_seg-manual.nii.gz => sub-queensland01_space-other_T1w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-queensland01/anat/{sub-queensland01_T2star_seg-manual.json => sub-queensland01_space-other_T2star_seg-manual.json} (100%) rename derivatives/labels/sub-queensland01/anat/{sub-queensland01_T2star_seg-manual.nii.gz => sub-queensland01_space-other_T2star_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-queensland01/anat/{sub-queensland01_T2w_labels-disc-manual.json => sub-queensland01_space-other_T2w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-queensland01/anat/{sub-queensland01_T2w_labels-disc-manual.nii.gz => sub-queensland01_space-other_T2w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-queensland01/anat/{sub-queensland01_T2w_seg-manual.json => sub-queensland01_space-other_T2w_seg-manual.json} (100%) rename derivatives/labels/sub-queensland01/anat/{sub-queensland01_T2w_seg-manual.nii.gz => sub-queensland01_space-other_T2w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-queensland02/anat/{sub-queensland02_flip-1_mt-on_MTS_seg-manual.json => sub-queensland02_flip-1_mt-on_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-queensland02/anat/{sub-queensland02_flip-1_mt-on_MTS_seg-manual.nii.gz => sub-queensland02_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-queensland02/anat/{sub-queensland02_T2star_seg-manual.json => sub-queensland02_flip-2_mt-off_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-queensland02/anat/{sub-queensland02_flip-2_mt-off_MTS_seg-manual.nii.gz => sub-queensland02_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-queensland02/anat/{sub-queensland02_T1w_labels-disc-manual.json => sub-queensland02_space-other_T1w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-queensland02/anat/{sub-queensland02_T1w_labels-disc-manual.nii.gz => sub-queensland02_space-other_T1w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-queensland02/anat/{sub-queensland02_T1w_seg-manual.json => sub-queensland02_space-other_T1w_seg-manual.json} (100%) rename derivatives/labels/sub-queensland02/anat/{sub-queensland02_T1w_seg-manual.nii.gz => sub-queensland02_space-other_T1w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-queensland02/anat/{sub-queensland02_T2w_seg-manual.json => sub-queensland02_space-other_T2star_seg-manual.json} (100%) rename derivatives/labels/sub-queensland02/anat/{sub-queensland02_T2star_seg-manual.nii.gz => sub-queensland02_space-other_T2star_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-queensland02/anat/{sub-queensland02_T2w_labels-disc-manual.json => sub-queensland02_space-other_T2w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-queensland02/anat/{sub-queensland02_T2w_labels-disc-manual.nii.gz => sub-queensland02_space-other_T2w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-queensland02/anat/{sub-queensland02_flip-2_mt-off_MTS_seg-manual.json => sub-queensland02_space-other_T2w_seg-manual.json} (100%) rename derivatives/labels/sub-queensland02/anat/{sub-queensland02_T2w_seg-manual.nii.gz => sub-queensland02_space-other_T2w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-queensland03/anat/{sub-queensland03_T2star_seg-manual.json => sub-queensland03_flip-1_mt-on_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-queensland03/anat/{sub-queensland03_flip-1_mt-on_MTS_seg-manual.nii.gz => sub-queensland03_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-queensland03/anat/{sub-queensland03_flip-2_mt-off_MTS_seg-manual.json => sub-queensland03_flip-2_mt-off_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-queensland03/anat/{sub-queensland03_flip-2_mt-off_MTS_seg-manual.nii.gz => sub-queensland03_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-queensland03/anat/{sub-queensland03_T1w_labels-disc-manual.json => sub-queensland03_space-other_T1w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-queensland03/anat/{sub-queensland03_T1w_labels-disc-manual.nii.gz => sub-queensland03_space-other_T1w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-queensland03/anat/{sub-queensland03_T1w_seg-manual.json => sub-queensland03_space-other_T1w_seg-manual.json} (100%) rename derivatives/labels/sub-queensland03/anat/{sub-queensland03_T1w_seg-manual.nii.gz => sub-queensland03_space-other_T1w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-queensland03/anat/{sub-queensland03_flip-1_mt-on_MTS_seg-manual.json => sub-queensland03_space-other_T2star_seg-manual.json} (100%) rename derivatives/labels/sub-queensland03/anat/{sub-queensland03_T2star_seg-manual.nii.gz => sub-queensland03_space-other_T2star_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-queensland03/anat/{sub-queensland03_T2w_labels-disc-manual.json => sub-queensland03_space-other_T2w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-queensland03/anat/{sub-queensland03_T2w_labels-disc-manual.nii.gz => sub-queensland03_space-other_T2w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-queensland03/anat/{sub-queensland03_T2w_seg-manual.json => sub-queensland03_space-other_T2w_seg-manual.json} (100%) rename derivatives/labels/sub-queensland03/anat/{sub-queensland03_T2w_seg-manual.nii.gz => sub-queensland03_space-other_T2w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-queensland04/anat/{sub-queensland04_flip-1_mt-on_MTS_seg-manual.json => sub-queensland04_flip-1_mt-on_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-queensland04/anat/{sub-queensland04_flip-1_mt-on_MTS_seg-manual.nii.gz => sub-queensland04_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-queensland04/anat/{sub-queensland04_flip-2_mt-off_MTS_seg-manual.json => sub-queensland04_flip-2_mt-off_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-queensland04/anat/{sub-queensland04_flip-2_mt-off_MTS_seg-manual.nii.gz => sub-queensland04_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-queensland04/anat/{sub-queensland04_T1w_labels-disc-manual.json => sub-queensland04_space-other_T1w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-queensland04/anat/{sub-queensland04_T1w_labels-disc-manual.nii.gz => sub-queensland04_space-other_T1w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-queensland04/anat/{sub-queensland04_T1w_seg-manual.json => sub-queensland04_space-other_T1w_seg-manual.json} (100%) rename derivatives/labels/sub-queensland04/anat/{sub-queensland04_T1w_seg-manual.nii.gz => sub-queensland04_space-other_T1w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-queensland04/anat/{sub-queensland04_T2star_seg-manual.json => sub-queensland04_space-other_T2star_seg-manual.json} (100%) rename derivatives/labels/sub-queensland04/anat/{sub-queensland04_T2star_seg-manual.nii.gz => sub-queensland04_space-other_T2star_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-queensland04/anat/{sub-queensland04_T2w_labels-disc-manual.json => sub-queensland04_space-other_T2w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-queensland04/anat/{sub-queensland04_T2w_labels-disc-manual.nii.gz => sub-queensland04_space-other_T2w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-queensland04/anat/{sub-queensland04_T2w_seg-manual.json => sub-queensland04_space-other_T2w_seg-manual.json} (100%) rename derivatives/labels/sub-queensland04/anat/{sub-queensland04_T2w_seg-manual.nii.gz => sub-queensland04_space-other_T2w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-queensland05/anat/{sub-queensland05_T2star_seg-manual.json => sub-queensland05_flip-1_mt-on_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-queensland05/anat/{sub-queensland05_flip-1_mt-on_MTS_seg-manual.nii.gz => sub-queensland05_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-queensland05/anat/{sub-queensland05_flip-2_mt-off_MTS_seg-manual.json => sub-queensland05_flip-2_mt-off_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-queensland05/anat/{sub-queensland05_flip-2_mt-off_MTS_seg-manual.nii.gz => sub-queensland05_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-queensland05/anat/{sub-queensland05_T1w_labels-disc-manual.json => sub-queensland05_space-other_T1w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-queensland05/anat/{sub-queensland05_T1w_labels-disc-manual.nii.gz => sub-queensland05_space-other_T1w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-queensland05/anat/{sub-queensland05_T1w_seg-manual.json => sub-queensland05_space-other_T1w_seg-manual.json} (100%) rename derivatives/labels/sub-queensland05/anat/{sub-queensland05_T1w_seg-manual.nii.gz => sub-queensland05_space-other_T1w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-queensland05/anat/{sub-queensland05_flip-1_mt-on_MTS_seg-manual.json => sub-queensland05_space-other_T2star_seg-manual.json} (100%) rename derivatives/labels/sub-queensland05/anat/{sub-queensland05_T2star_seg-manual.nii.gz => sub-queensland05_space-other_T2star_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-queensland05/anat/{sub-queensland05_T2w_labels-disc-manual.json => sub-queensland05_space-other_T2w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-queensland05/anat/{sub-queensland05_T2w_labels-disc-manual.nii.gz => sub-queensland05_space-other_T2w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-queensland05/anat/{sub-queensland05_T2w_seg-manual.json => sub-queensland05_space-other_T2w_seg-manual.json} (100%) rename derivatives/labels/sub-queensland05/anat/{sub-queensland05_T2w_seg-manual.nii.gz => sub-queensland05_space-other_T2w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-queensland06/anat/{sub-queensland06_T2star_seg-manual.json => sub-queensland06_flip-1_mt-on_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-queensland06/anat/{sub-queensland06_flip-1_mt-on_MTS_seg-manual.nii.gz => sub-queensland06_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-queensland06/anat/{sub-queensland06_flip-2_mt-off_MTS_seg-manual.json => sub-queensland06_flip-2_mt-off_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-queensland06/anat/{sub-queensland06_flip-2_mt-off_MTS_seg-manual.nii.gz => sub-queensland06_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-queensland06/anat/{sub-queensland06_T1w_labels-disc-manual.json => sub-queensland06_space-other_T1w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-queensland06/anat/{sub-queensland06_T1w_labels-disc-manual.nii.gz => sub-queensland06_space-other_T1w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-queensland06/anat/{sub-queensland06_T1w_seg-manual.json => sub-queensland06_space-other_T1w_seg-manual.json} (100%) rename derivatives/labels/sub-queensland06/anat/{sub-queensland06_T1w_seg-manual.nii.gz => sub-queensland06_space-other_T1w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-queensland06/anat/{sub-queensland06_flip-1_mt-on_MTS_seg-manual.json => sub-queensland06_space-other_T2star_seg-manual.json} (100%) rename derivatives/labels/sub-queensland06/anat/{sub-queensland06_T2star_seg-manual.nii.gz => sub-queensland06_space-other_T2star_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-queensland06/anat/{sub-queensland06_T2w_labels-disc-manual.json => sub-queensland06_space-other_T2w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-queensland06/anat/{sub-queensland06_T2w_labels-disc-manual.nii.gz => sub-queensland06_space-other_T2w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-queensland06/anat/{sub-queensland06_T2w_seg-manual.json => sub-queensland06_space-other_T2w_seg-manual.json} (100%) rename derivatives/labels/sub-queensland06/anat/{sub-queensland06_T2w_seg-manual.nii.gz => sub-queensland06_space-other_T2w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-sherbrooke01/anat/{sub-sherbrooke01_T2star_seg-manual.json => sub-sherbrooke01_flip-1_mt-on_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-sherbrooke01/anat/{sub-sherbrooke01_flip-1_mt-on_MTS_seg-manual.nii.gz => sub-sherbrooke01_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-sherbrooke01/anat/{sub-sherbrooke01_flip-1_mt-on_MTS_seg-manual.json => sub-sherbrooke01_flip-2_mt-off_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-sherbrooke01/anat/{sub-sherbrooke01_flip-2_mt-off_MTS_seg-manual.nii.gz => sub-sherbrooke01_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-sherbrooke01/anat/{sub-sherbrooke01_T1w_labels-disc-manual.json => sub-sherbrooke01_space-other_T1w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-sherbrooke01/anat/{sub-sherbrooke01_T1w_labels-disc-manual.nii.gz => sub-sherbrooke01_space-other_T1w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-sherbrooke01/anat/{sub-sherbrooke01_T1w_seg-manual.json => sub-sherbrooke01_space-other_T1w_seg-manual.json} (100%) rename derivatives/labels/sub-sherbrooke01/anat/{sub-sherbrooke01_T1w_seg-manual.nii.gz => sub-sherbrooke01_space-other_T1w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-sherbrooke01/anat/{sub-sherbrooke01_T2star_gmseg-manual.json => sub-sherbrooke01_space-other_T2star_gmseg-manual.json} (100%) rename derivatives/labels/sub-sherbrooke01/anat/{sub-sherbrooke01_T2star_gmseg-manual.nii.gz => sub-sherbrooke01_space-other_T2star_gmseg-manual.nii.gz} (100%) rename derivatives/labels/sub-sherbrooke01/anat/{sub-sherbrooke01_flip-2_mt-off_MTS_seg-manual.json => sub-sherbrooke01_space-other_T2star_seg-manual.json} (100%) rename derivatives/labels/sub-sherbrooke01/anat/{sub-sherbrooke01_T2star_seg-manual.nii.gz => sub-sherbrooke01_space-other_T2star_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-sherbrooke01/anat/{sub-sherbrooke01_T2w_labels-disc-manual.json => sub-sherbrooke01_space-other_T2w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-sherbrooke01/anat/{sub-sherbrooke01_T2w_labels-disc-manual.nii.gz => sub-sherbrooke01_space-other_T2w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-sherbrooke01/anat/{sub-sherbrooke01_T2w_seg-manual.json => sub-sherbrooke01_space-other_T2w_seg-manual.json} (100%) rename derivatives/labels/sub-sherbrooke01/anat/{sub-sherbrooke01_T2w_seg-manual.nii.gz => sub-sherbrooke01_space-other_T2w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-sherbrooke02/anat/{sub-sherbrooke02_flip-1_mt-on_MTS_seg-manual.json => sub-sherbrooke02_flip-1_mt-on_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-sherbrooke02/anat/{sub-sherbrooke02_flip-1_mt-on_MTS_seg-manual.nii.gz => sub-sherbrooke02_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-sherbrooke02/anat/{sub-sherbrooke02_flip-2_mt-off_MTS_seg-manual.json => sub-sherbrooke02_flip-2_mt-off_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-sherbrooke02/anat/{sub-sherbrooke02_flip-2_mt-off_MTS_seg-manual.nii.gz => sub-sherbrooke02_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-sherbrooke02/anat/{sub-sherbrooke02_T1w_labels-disc-manual.json => sub-sherbrooke02_space-other_T1w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-sherbrooke02/anat/{sub-sherbrooke02_T1w_labels-disc-manual.nii.gz => sub-sherbrooke02_space-other_T1w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-sherbrooke02/anat/{sub-sherbrooke02_T1w_seg-manual.json => sub-sherbrooke02_space-other_T1w_seg-manual.json} (100%) rename derivatives/labels/sub-sherbrooke02/anat/{sub-sherbrooke02_T1w_seg-manual.nii.gz => sub-sherbrooke02_space-other_T1w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-sherbrooke02/anat/{sub-sherbrooke02_T2star_seg-manual.json => sub-sherbrooke02_space-other_T2star_seg-manual.json} (100%) rename derivatives/labels/sub-sherbrooke02/anat/{sub-sherbrooke02_T2star_seg-manual.nii.gz => sub-sherbrooke02_space-other_T2star_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-sherbrooke02/anat/{sub-sherbrooke02_T2w_labels-disc-manual.json => sub-sherbrooke02_space-other_T2w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-sherbrooke02/anat/{sub-sherbrooke02_T2w_labels-disc-manual.nii.gz => sub-sherbrooke02_space-other_T2w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-sherbrooke02/anat/{sub-sherbrooke02_T2w_seg-manual.json => sub-sherbrooke02_space-other_T2w_seg-manual.json} (100%) rename derivatives/labels/sub-sherbrooke02/anat/{sub-sherbrooke02_T2w_seg-manual.nii.gz => sub-sherbrooke02_space-other_T2w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-sherbrooke03/anat/{sub-sherbrooke03_T2star_seg-manual.json => sub-sherbrooke03_flip-1_mt-on_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-sherbrooke03/anat/{sub-sherbrooke03_flip-1_mt-on_MTS_seg-manual.nii.gz => sub-sherbrooke03_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-sherbrooke03/anat/{sub-sherbrooke03_flip-2_mt-off_MTS_seg-manual.json => sub-sherbrooke03_flip-2_mt-off_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-sherbrooke03/anat/{sub-sherbrooke03_flip-2_mt-off_MTS_seg-manual.nii.gz => sub-sherbrooke03_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-sherbrooke03/anat/{sub-sherbrooke03_T1w_labels-disc-manual.json => sub-sherbrooke03_space-other_T1w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-sherbrooke03/anat/{sub-sherbrooke03_T1w_labels-disc-manual.nii.gz => sub-sherbrooke03_space-other_T1w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-sherbrooke03/anat/{sub-sherbrooke03_T1w_seg-manual.json => sub-sherbrooke03_space-other_T1w_seg-manual.json} (100%) rename derivatives/labels/sub-sherbrooke03/anat/{sub-sherbrooke03_T1w_seg-manual.nii.gz => sub-sherbrooke03_space-other_T1w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-sherbrooke03/anat/{sub-sherbrooke03_T2star_gmseg-manual.json => sub-sherbrooke03_space-other_T2star_gmseg-manual.json} (100%) rename derivatives/labels/sub-sherbrooke03/anat/{sub-sherbrooke03_T2star_gmseg-manual.nii.gz => sub-sherbrooke03_space-other_T2star_gmseg-manual.nii.gz} (100%) rename derivatives/labels/sub-sherbrooke03/anat/{sub-sherbrooke03_T2w_seg-manual.json => sub-sherbrooke03_space-other_T2star_seg-manual.json} (100%) rename derivatives/labels/sub-sherbrooke03/anat/{sub-sherbrooke03_T2star_seg-manual.nii.gz => sub-sherbrooke03_space-other_T2star_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-sherbrooke03/anat/{sub-sherbrooke03_T2w_labels-disc-manual.json => sub-sherbrooke03_space-other_T2w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-sherbrooke03/anat/{sub-sherbrooke03_T2w_labels-disc-manual.nii.gz => sub-sherbrooke03_space-other_T2w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-sherbrooke03/anat/{sub-sherbrooke03_flip-1_mt-on_MTS_seg-manual.json => sub-sherbrooke03_space-other_T2w_seg-manual.json} (100%) rename derivatives/labels/sub-sherbrooke03/anat/{sub-sherbrooke03_T2w_seg-manual.nii.gz => sub-sherbrooke03_space-other_T2w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-sherbrooke04/anat/{sub-sherbrooke04_flip-1_mt-on_MTS_seg-manual.json => sub-sherbrooke04_flip-1_mt-on_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-sherbrooke04/anat/{sub-sherbrooke04_flip-1_mt-on_MTS_seg-manual.nii.gz => sub-sherbrooke04_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-sherbrooke04/anat/{sub-sherbrooke04_flip-2_mt-off_MTS_seg-manual.json => sub-sherbrooke04_flip-2_mt-off_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-sherbrooke04/anat/{sub-sherbrooke04_flip-2_mt-off_MTS_seg-manual.nii.gz => sub-sherbrooke04_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-sherbrooke04/anat/{sub-sherbrooke04_T1w_labels-disc-manual.json => sub-sherbrooke04_space-other_T1w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-sherbrooke04/anat/{sub-sherbrooke04_T1w_labels-disc-manual.nii.gz => sub-sherbrooke04_space-other_T1w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-sherbrooke04/anat/{sub-sherbrooke04_T1w_seg-manual.json => sub-sherbrooke04_space-other_T1w_seg-manual.json} (100%) rename derivatives/labels/sub-sherbrooke04/anat/{sub-sherbrooke04_T1w_seg-manual.nii.gz => sub-sherbrooke04_space-other_T1w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-sherbrooke04/anat/{sub-sherbrooke04_T2star_seg-manual.json => sub-sherbrooke04_space-other_T2star_seg-manual.json} (100%) rename derivatives/labels/sub-sherbrooke04/anat/{sub-sherbrooke04_T2star_seg-manual.nii.gz => sub-sherbrooke04_space-other_T2star_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-sherbrooke04/anat/{sub-sherbrooke04_T2w_labels-disc-manual.json => sub-sherbrooke04_space-other_T2w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-sherbrooke04/anat/{sub-sherbrooke04_T2w_labels-disc-manual.nii.gz => sub-sherbrooke04_space-other_T2w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-sherbrooke04/anat/{sub-sherbrooke04_T2w_seg-manual.json => sub-sherbrooke04_space-other_T2w_seg-manual.json} (100%) rename derivatives/labels/sub-sherbrooke04/anat/{sub-sherbrooke04_T2w_seg-manual.nii.gz => sub-sherbrooke04_space-other_T2w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-sherbrooke05/anat/{sub-sherbrooke05_flip-1_mt-on_MTS_seg-manual.json => sub-sherbrooke05_flip-1_mt-on_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-sherbrooke05/anat/{sub-sherbrooke05_flip-1_mt-on_MTS_seg-manual.nii.gz => sub-sherbrooke05_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-sherbrooke05/anat/{sub-sherbrooke05_flip-2_mt-off_MTS_seg-manual.json => sub-sherbrooke05_flip-2_mt-off_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-sherbrooke05/anat/{sub-sherbrooke05_flip-2_mt-off_MTS_seg-manual.nii.gz => sub-sherbrooke05_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-sherbrooke05/anat/{sub-sherbrooke05_T1w_labels-disc-manual.json => sub-sherbrooke05_space-other_T1w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-sherbrooke05/anat/{sub-sherbrooke05_T1w_labels-disc-manual.nii.gz => sub-sherbrooke05_space-other_T1w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-sherbrooke05/anat/{sub-sherbrooke05_T1w_seg-manual.json => sub-sherbrooke05_space-other_T1w_seg-manual.json} (100%) rename derivatives/labels/sub-sherbrooke05/anat/{sub-sherbrooke05_T1w_seg-manual.nii.gz => sub-sherbrooke05_space-other_T1w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-sherbrooke05/anat/{sub-sherbrooke05_T2star_seg-manual.json => sub-sherbrooke05_space-other_T2star_seg-manual.json} (100%) rename derivatives/labels/sub-sherbrooke05/anat/{sub-sherbrooke05_T2star_seg-manual.nii.gz => sub-sherbrooke05_space-other_T2star_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-sherbrooke05/anat/{sub-sherbrooke05_T2w_labels-disc-manual.json => sub-sherbrooke05_space-other_T2w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-sherbrooke05/anat/{sub-sherbrooke05_T2w_labels-disc-manual.nii.gz => sub-sherbrooke05_space-other_T2w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-sherbrooke05/anat/{sub-sherbrooke05_T2w_seg-manual.json => sub-sherbrooke05_space-other_T2w_seg-manual.json} (100%) rename derivatives/labels/sub-sherbrooke05/anat/{sub-sherbrooke05_T2w_seg-manual.nii.gz => sub-sherbrooke05_space-other_T2w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-sherbrooke06/anat/{sub-sherbrooke06_T1w_seg-manual.json => sub-sherbrooke06_flip-1_mt-on_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-sherbrooke06/anat/{sub-sherbrooke06_flip-1_mt-on_MTS_seg-manual.nii.gz => sub-sherbrooke06_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-sherbrooke06/anat/{sub-sherbrooke06_flip-2_mt-off_MTS_seg-manual.json => sub-sherbrooke06_flip-2_mt-off_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-sherbrooke06/anat/{sub-sherbrooke06_flip-2_mt-off_MTS_seg-manual.nii.gz => sub-sherbrooke06_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-sherbrooke06/anat/{sub-sherbrooke06_T1w_labels-disc-manual.json => sub-sherbrooke06_space-other_T1w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-sherbrooke06/anat/{sub-sherbrooke06_T1w_labels-disc-manual.nii.gz => sub-sherbrooke06_space-other_T1w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-sherbrooke06/anat/{sub-sherbrooke06_T2star_seg-manual.json => sub-sherbrooke06_space-other_T1w_seg-manual.json} (100%) rename derivatives/labels/sub-sherbrooke06/anat/{sub-sherbrooke06_T1w_seg-manual.nii.gz => sub-sherbrooke06_space-other_T1w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-sherbrooke06/anat/{sub-sherbrooke06_flip-1_mt-on_MTS_seg-manual.json => sub-sherbrooke06_space-other_T2star_seg-manual.json} (100%) rename derivatives/labels/sub-sherbrooke06/anat/{sub-sherbrooke06_T2star_seg-manual.nii.gz => sub-sherbrooke06_space-other_T2star_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-sherbrooke06/anat/{sub-sherbrooke06_T2w_labels-disc-manual.json => sub-sherbrooke06_space-other_T2w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-sherbrooke06/anat/{sub-sherbrooke06_T2w_labels-disc-manual.nii.gz => sub-sherbrooke06_space-other_T2w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-sherbrooke06/anat/{sub-sherbrooke06_T2w_seg-manual.json => sub-sherbrooke06_space-other_T2w_seg-manual.json} (100%) rename derivatives/labels/sub-sherbrooke06/anat/{sub-sherbrooke06_T2w_seg-manual.nii.gz => sub-sherbrooke06_space-other_T2w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-sherbrooke07/anat/{sub-sherbrooke07_flip-1_mt-on_MTS_seg-manual.json => sub-sherbrooke07_flip-1_mt-on_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-sherbrooke07/anat/{sub-sherbrooke07_flip-1_mt-on_MTS_seg-manual.nii.gz => sub-sherbrooke07_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-sherbrooke07/anat/{sub-sherbrooke07_T2star_seg-manual.json => sub-sherbrooke07_flip-2_mt-off_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-sherbrooke07/anat/{sub-sherbrooke07_flip-2_mt-off_MTS_seg-manual.nii.gz => sub-sherbrooke07_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-sherbrooke07/anat/{sub-sherbrooke07_T1w_labels-disc-manual.json => sub-sherbrooke07_space-other_T1w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-sherbrooke07/anat/{sub-sherbrooke07_T1w_labels-disc-manual.nii.gz => sub-sherbrooke07_space-other_T1w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-sherbrooke07/anat/{sub-sherbrooke07_T1w_seg-manual.json => sub-sherbrooke07_space-other_T1w_seg-manual.json} (100%) rename derivatives/labels/sub-sherbrooke07/anat/{sub-sherbrooke07_T1w_seg-manual.nii.gz => sub-sherbrooke07_space-other_T1w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-sherbrooke07/anat/{sub-sherbrooke07_T2w_seg-manual.json => sub-sherbrooke07_space-other_T2star_seg-manual.json} (100%) rename derivatives/labels/sub-sherbrooke07/anat/{sub-sherbrooke07_T2star_seg-manual.nii.gz => sub-sherbrooke07_space-other_T2star_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-sherbrooke07/anat/{sub-sherbrooke07_T2w_labels-disc-manual.json => sub-sherbrooke07_space-other_T2w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-sherbrooke07/anat/{sub-sherbrooke07_T2w_labels-disc-manual.nii.gz => sub-sherbrooke07_space-other_T2w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-sherbrooke07/anat/{sub-sherbrooke07_flip-2_mt-off_MTS_seg-manual.json => sub-sherbrooke07_space-other_T2w_seg-manual.json} (100%) rename derivatives/labels/sub-sherbrooke07/anat/{sub-sherbrooke07_T2w_seg-manual.nii.gz => sub-sherbrooke07_space-other_T2w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-stanford01/anat/{sub-stanford01_flip-1_mt-on_MTS_seg-manual.json => sub-stanford01_flip-1_mt-on_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-stanford01/anat/{sub-stanford01_flip-1_mt-on_MTS_seg-manual.nii.gz => sub-stanford01_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-stanford01/anat/{sub-stanford01_flip-2_mt-off_MTS_seg-manual.json => sub-stanford01_flip-2_mt-off_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-stanford01/anat/{sub-stanford01_flip-2_mt-off_MTS_seg-manual.nii.gz => sub-stanford01_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-stanford01/anat/{sub-stanford01_T1w_labels-disc-manual.json => sub-stanford01_space-other_T1w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-stanford01/anat/{sub-stanford01_T1w_labels-disc-manual.nii.gz => sub-stanford01_space-other_T1w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-stanford01/anat/{sub-stanford01_T1w_seg-manual.json => sub-stanford01_space-other_T1w_seg-manual.json} (100%) rename derivatives/labels/sub-stanford01/anat/{sub-stanford01_T1w_seg-manual.nii.gz => sub-stanford01_space-other_T1w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-stanford01/anat/{sub-stanford01_T2star_seg-manual.json => sub-stanford01_space-other_T2star_seg-manual.json} (100%) rename derivatives/labels/sub-stanford01/anat/{sub-stanford01_T2star_seg-manual.nii.gz => sub-stanford01_space-other_T2star_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-stanford01/anat/{sub-stanford01_T2w_labels-disc-manual.json => sub-stanford01_space-other_T2w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-stanford01/anat/{sub-stanford01_T2w_labels-disc-manual.nii.gz => sub-stanford01_space-other_T2w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-stanford01/anat/{sub-stanford01_T2w_seg-manual.json => sub-stanford01_space-other_T2w_seg-manual.json} (100%) rename derivatives/labels/sub-stanford01/anat/{sub-stanford01_T2w_seg-manual.nii.gz => sub-stanford01_space-other_T2w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-stanford02/anat/{sub-stanford02_T2star_seg-manual.json => sub-stanford02_flip-1_mt-on_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-stanford02/anat/{sub-stanford02_flip-1_mt-on_MTS_seg-manual.nii.gz => sub-stanford02_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-stanford02/anat/{sub-stanford02_flip-2_mt-off_MTS_seg-manual.json => sub-stanford02_flip-2_mt-off_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-stanford02/anat/{sub-stanford02_flip-2_mt-off_MTS_seg-manual.nii.gz => sub-stanford02_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-stanford02/anat/{sub-stanford02_T1w_labels-disc-manual.json => sub-stanford02_space-other_T1w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-stanford02/anat/{sub-stanford02_T1w_labels-disc-manual.nii.gz => sub-stanford02_space-other_T1w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-stanford02/anat/{sub-stanford02_T1w_seg-manual.json => sub-stanford02_space-other_T1w_seg-manual.json} (100%) rename derivatives/labels/sub-stanford02/anat/{sub-stanford02_T1w_seg-manual.nii.gz => sub-stanford02_space-other_T1w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-stanford02/anat/{sub-stanford02_flip-1_mt-on_MTS_seg-manual.json => sub-stanford02_space-other_T2star_seg-manual.json} (100%) rename derivatives/labels/sub-stanford02/anat/{sub-stanford02_T2star_seg-manual.nii.gz => sub-stanford02_space-other_T2star_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-stanford02/anat/{sub-stanford02_T2w_labels-disc-manual.json => sub-stanford02_space-other_T2w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-stanford02/anat/{sub-stanford02_T2w_labels-disc-manual.nii.gz => sub-stanford02_space-other_T2w_labels-disc-manual.nii.gz} (100%) rename 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rename derivatives/labels/sub-stanford04/anat/{sub-stanford04_flip-2_mt-off_MTS_seg-manual.json => sub-stanford04_flip-2_mt-off_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-stanford04/anat/{sub-stanford04_flip-2_mt-off_MTS_seg-manual.nii.gz => sub-stanford04_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-stanford04/anat/{sub-stanford04_T1w_labels-disc-manual.json => sub-stanford04_space-other_T1w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-stanford04/anat/{sub-stanford04_T1w_labels-disc-manual.nii.gz => sub-stanford04_space-other_T1w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-stanford04/anat/{sub-stanford04_T1w_seg-manual.json => sub-stanford04_space-other_T1w_seg-manual.json} (100%) rename derivatives/labels/sub-stanford04/anat/{sub-stanford04_T1w_seg-manual.nii.gz => sub-stanford04_space-other_T1w_seg-manual.nii.gz} (100%) rename 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sub-stanford06_space-other_T2star_seg-manual.json} (100%) rename derivatives/labels/sub-stanford06/anat/{sub-stanford06_T2star_seg-manual.nii.gz => sub-stanford06_space-other_T2star_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-stanford06/anat/{sub-stanford06_T2w_labels-disc-manual.json => sub-stanford06_space-other_T2w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-stanford06/anat/{sub-stanford06_T2w_labels-disc-manual.nii.gz => sub-stanford06_space-other_T2w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-stanford06/anat/{sub-stanford06_T2w_seg-manual.json => sub-stanford06_space-other_T2w_seg-manual.json} (100%) rename derivatives/labels/sub-stanford06/anat/{sub-stanford06_T2w_seg-manual.nii.gz => sub-stanford06_space-other_T2w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-strasbourg01/anat/{sub-strasbourg01_T2star_seg-manual.json => sub-strasbourg01_flip-1_mt-on_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-strasbourg01/anat/{sub-strasbourg01_flip-1_mt-on_MTS_seg-manual.nii.gz => sub-strasbourg01_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-strasbourg01/anat/{sub-strasbourg01_flip-2_mt-off_MTS_seg-manual.json => sub-strasbourg01_flip-2_mt-off_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-strasbourg01/anat/{sub-strasbourg01_flip-2_mt-off_MTS_seg-manual.nii.gz => sub-strasbourg01_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-strasbourg01/anat/{sub-strasbourg01_T1w_labels-disc-manual.json => sub-strasbourg01_space-other_T1w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-strasbourg01/anat/{sub-strasbourg01_T1w_labels-disc-manual.nii.gz => sub-strasbourg01_space-other_T1w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-strasbourg01/anat/{sub-strasbourg01_T1w_seg-manual.json => sub-strasbourg01_space-other_T1w_seg-manual.json} (100%) rename derivatives/labels/sub-strasbourg01/anat/{sub-strasbourg01_T1w_seg-manual.nii.gz => sub-strasbourg01_space-other_T1w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-strasbourg01/anat/{sub-strasbourg01_T2w_seg-manual.json => sub-strasbourg01_space-other_T2star_seg-manual.json} (100%) rename derivatives/labels/sub-strasbourg01/anat/{sub-strasbourg01_T2star_seg-manual.nii.gz => sub-strasbourg01_space-other_T2star_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-strasbourg01/anat/{sub-strasbourg01_T2w_labels-disc-manual.json => sub-strasbourg01_space-other_T2w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-strasbourg01/anat/{sub-strasbourg01_T2w_labels-disc-manual.nii.gz => sub-strasbourg01_space-other_T2w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-strasbourg01/anat/{sub-strasbourg01_flip-1_mt-on_MTS_seg-manual.json => sub-strasbourg01_space-other_T2w_seg-manual.json} (100%) rename derivatives/labels/sub-strasbourg01/anat/{sub-strasbourg01_T2w_seg-manual.nii.gz => sub-strasbourg01_space-other_T2w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-strasbourg02/anat/{sub-strasbourg02_flip-1_mt-on_MTS_seg-manual.json => sub-strasbourg02_flip-1_mt-on_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-strasbourg02/anat/{sub-strasbourg02_flip-1_mt-on_MTS_seg-manual.nii.gz => sub-strasbourg02_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-strasbourg02/anat/{sub-strasbourg02_flip-2_mt-off_MTS_seg-manual.json => sub-strasbourg02_flip-2_mt-off_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-strasbourg02/anat/{sub-strasbourg02_flip-2_mt-off_MTS_seg-manual.nii.gz => sub-strasbourg02_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-strasbourg02/anat/{sub-strasbourg02_T1w_labels-disc-manual.json => sub-strasbourg02_space-other_T1w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-strasbourg02/anat/{sub-strasbourg02_T1w_labels-disc-manual.nii.gz => sub-strasbourg02_space-other_T1w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-strasbourg02/anat/{sub-strasbourg02_T1w_seg-manual.json => sub-strasbourg02_space-other_T1w_seg-manual.json} (100%) rename derivatives/labels/sub-strasbourg02/anat/{sub-strasbourg02_T1w_seg-manual.nii.gz => sub-strasbourg02_space-other_T1w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-strasbourg02/anat/{sub-strasbourg02_T2star_seg-manual.json => sub-strasbourg02_space-other_T2star_seg-manual.json} (100%) rename derivatives/labels/sub-strasbourg02/anat/{sub-strasbourg02_T2star_seg-manual.nii.gz => sub-strasbourg02_space-other_T2star_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-strasbourg02/anat/{sub-strasbourg02_T2w_labels-disc-manual.json => sub-strasbourg02_space-other_T2w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-strasbourg02/anat/{sub-strasbourg02_T2w_labels-disc-manual.nii.gz => sub-strasbourg02_space-other_T2w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-strasbourg02/anat/{sub-strasbourg02_T2w_seg-manual.json => sub-strasbourg02_space-other_T2w_seg-manual.json} (100%) rename derivatives/labels/sub-strasbourg02/anat/{sub-strasbourg02_T2w_seg-manual.nii.gz => sub-strasbourg02_space-other_T2w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-strasbourg03/anat/{sub-strasbourg03_T2star_seg-manual.json => sub-strasbourg03_flip-1_mt-on_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-strasbourg03/anat/{sub-strasbourg03_flip-1_mt-on_MTS_seg-manual.nii.gz => sub-strasbourg03_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-strasbourg03/anat/{sub-strasbourg03_flip-1_mt-on_MTS_seg-manual.json => sub-strasbourg03_flip-2_mt-off_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-strasbourg03/anat/{sub-strasbourg03_flip-2_mt-off_MTS_seg-manual.nii.gz => sub-strasbourg03_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-strasbourg03/anat/{sub-strasbourg03_T1w_labels-disc-manual.json => sub-strasbourg03_space-other_T1w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-strasbourg03/anat/{sub-strasbourg03_T1w_labels-disc-manual.nii.gz => sub-strasbourg03_space-other_T1w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-strasbourg03/anat/{sub-strasbourg03_T1w_seg-manual.json => sub-strasbourg03_space-other_T1w_seg-manual.json} (100%) rename derivatives/labels/sub-strasbourg03/anat/{sub-strasbourg03_T1w_seg-manual.nii.gz => sub-strasbourg03_space-other_T1w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-strasbourg03/anat/{sub-strasbourg03_flip-2_mt-off_MTS_seg-manual.json => sub-strasbourg03_space-other_T2star_seg-manual.json} (100%) rename derivatives/labels/sub-strasbourg03/anat/{sub-strasbourg03_T2star_seg-manual.nii.gz => sub-strasbourg03_space-other_T2star_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-strasbourg03/anat/{sub-strasbourg03_T2w_labels-disc-manual.json => sub-strasbourg03_space-other_T2w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-strasbourg03/anat/{sub-strasbourg03_T2w_labels-disc-manual.nii.gz => sub-strasbourg03_space-other_T2w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-strasbourg03/anat/{sub-strasbourg03_T2w_seg-manual.json => sub-strasbourg03_space-other_T2w_seg-manual.json} (100%) rename derivatives/labels/sub-strasbourg03/anat/{sub-strasbourg03_T2w_seg-manual.nii.gz => sub-strasbourg03_space-other_T2w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-strasbourg04/anat/{sub-strasbourg04_T2star_seg-manual.json => sub-strasbourg04_flip-1_mt-on_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-strasbourg04/anat/{sub-strasbourg04_flip-1_mt-on_MTS_seg-manual.nii.gz => sub-strasbourg04_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-strasbourg04/anat/{sub-strasbourg04_flip-2_mt-off_MTS_seg-manual.json => sub-strasbourg04_flip-2_mt-off_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-strasbourg04/anat/{sub-strasbourg04_flip-2_mt-off_MTS_seg-manual.nii.gz => sub-strasbourg04_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-strasbourg04/anat/{sub-strasbourg04_T1w_labels-disc-manual.json => sub-strasbourg04_space-other_T1w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-strasbourg04/anat/{sub-strasbourg04_T1w_labels-disc-manual.nii.gz => sub-strasbourg04_space-other_T1w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-strasbourg04/anat/{sub-strasbourg04_T1w_seg-manual.json => sub-strasbourg04_space-other_T1w_seg-manual.json} (100%) rename derivatives/labels/sub-strasbourg04/anat/{sub-strasbourg04_T1w_seg-manual.nii.gz => sub-strasbourg04_space-other_T1w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-strasbourg04/anat/{sub-strasbourg04_flip-1_mt-on_MTS_seg-manual.json => sub-strasbourg04_space-other_T2star_seg-manual.json} (100%) rename derivatives/labels/sub-strasbourg04/anat/{sub-strasbourg04_T2star_seg-manual.nii.gz => sub-strasbourg04_space-other_T2star_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-strasbourg04/anat/{sub-strasbourg04_T2w_labels-disc-manual.json => sub-strasbourg04_space-other_T2w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-strasbourg04/anat/{sub-strasbourg04_T2w_labels-disc-manual.nii.gz => sub-strasbourg04_space-other_T2w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-strasbourg04/anat/{sub-strasbourg04_T2w_seg-manual.json => sub-strasbourg04_space-other_T2w_seg-manual.json} (100%) rename derivatives/labels/sub-strasbourg04/anat/{sub-strasbourg04_T2w_seg-manual.nii.gz => sub-strasbourg04_space-other_T2w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-strasbourg05/anat/{sub-strasbourg05_T2star_seg-manual.json => sub-strasbourg05_flip-1_mt-on_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-strasbourg05/anat/{sub-strasbourg05_flip-1_mt-on_MTS_seg-manual.nii.gz => sub-strasbourg05_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-strasbourg05/anat/{sub-strasbourg05_flip-1_mt-on_MTS_seg-manual.json => sub-strasbourg05_flip-2_mt-off_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-strasbourg05/anat/{sub-strasbourg05_flip-2_mt-off_MTS_seg-manual.nii.gz => sub-strasbourg05_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-strasbourg05/anat/{sub-strasbourg05_T1w_labels-disc-manual.json => sub-strasbourg05_space-other_T1w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-strasbourg05/anat/{sub-strasbourg05_T1w_labels-disc-manual.nii.gz => sub-strasbourg05_space-other_T1w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-strasbourg05/anat/{sub-strasbourg05_T1w_seg-manual.json => sub-strasbourg05_space-other_T1w_seg-manual.json} (100%) rename derivatives/labels/sub-strasbourg05/anat/{sub-strasbourg05_T1w_seg-manual.nii.gz => sub-strasbourg05_space-other_T1w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-strasbourg05/anat/{sub-strasbourg05_flip-2_mt-off_MTS_seg-manual.json => sub-strasbourg05_space-other_T2star_seg-manual.json} (100%) rename derivatives/labels/sub-strasbourg05/anat/{sub-strasbourg05_T2star_seg-manual.nii.gz => sub-strasbourg05_space-other_T2star_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-strasbourg05/anat/{sub-strasbourg05_T2w_labels-disc-manual.json => sub-strasbourg05_space-other_T2w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-strasbourg05/anat/{sub-strasbourg05_T2w_labels-disc-manual.nii.gz => sub-strasbourg05_space-other_T2w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-strasbourg05/anat/{sub-strasbourg05_T2w_seg-manual.json => sub-strasbourg05_space-other_T2w_seg-manual.json} (100%) rename derivatives/labels/sub-strasbourg05/anat/{sub-strasbourg05_T2w_seg-manual.nii.gz => sub-strasbourg05_space-other_T2w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-strasbourg06/anat/{sub-strasbourg06_flip-1_mt-on_MTS_seg-manual.json => sub-strasbourg06_flip-1_mt-on_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-strasbourg06/anat/{sub-strasbourg06_flip-1_mt-on_MTS_seg-manual.nii.gz => sub-strasbourg06_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-strasbourg06/anat/{sub-strasbourg06_flip-2_mt-off_MTS_seg-manual.json => sub-strasbourg06_flip-2_mt-off_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-strasbourg06/anat/{sub-strasbourg06_flip-2_mt-off_MTS_seg-manual.nii.gz => sub-strasbourg06_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-strasbourg06/anat/{sub-strasbourg06_T1w_labels-disc-manual.json => sub-strasbourg06_space-other_T1w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-strasbourg06/anat/{sub-strasbourg06_T1w_labels-disc-manual.nii.gz => sub-strasbourg06_space-other_T1w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-strasbourg06/anat/{sub-strasbourg06_T1w_seg-manual.json => sub-strasbourg06_space-other_T1w_seg-manual.json} (100%) rename derivatives/labels/sub-strasbourg06/anat/{sub-strasbourg06_T1w_seg-manual.nii.gz => sub-strasbourg06_space-other_T1w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-strasbourg06/anat/{sub-strasbourg06_T2star_seg-manual.json => sub-strasbourg06_space-other_T2star_seg-manual.json} (100%) rename derivatives/labels/sub-strasbourg06/anat/{sub-strasbourg06_T2star_seg-manual.nii.gz => sub-strasbourg06_space-other_T2star_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-strasbourg06/anat/{sub-strasbourg06_T2w_labels-disc-manual.json => sub-strasbourg06_space-other_T2w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-strasbourg06/anat/{sub-strasbourg06_T2w_labels-disc-manual.nii.gz => sub-strasbourg06_space-other_T2w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-strasbourg06/anat/{sub-strasbourg06_T2w_seg-manual.json => sub-strasbourg06_space-other_T2w_seg-manual.json} (100%) rename derivatives/labels/sub-strasbourg06/anat/{sub-strasbourg06_T2w_seg-manual.nii.gz => sub-strasbourg06_space-other_T2w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-tehranS01/anat/{sub-tehranS01_flip-1_mt-on_MTS_seg-manual.json => sub-tehranS01_flip-1_mt-on_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-tehranS01/anat/{sub-tehranS01_flip-1_mt-on_MTS_seg-manual.nii.gz => sub-tehranS01_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-tehranS01/anat/{sub-tehranS01_flip-2_mt-off_MTS_seg-manual.json => sub-tehranS01_flip-2_mt-off_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-tehranS01/anat/{sub-tehranS01_flip-2_mt-off_MTS_seg-manual.nii.gz => sub-tehranS01_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-tehranS01/anat/{sub-tehranS01_T1w_labels-disc-manual.json => sub-tehranS01_space-other_T1w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-tehranS01/anat/{sub-tehranS01_T1w_labels-disc-manual.nii.gz => sub-tehranS01_space-other_T1w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-tehranS01/anat/{sub-tehranS01_T1w_seg-manual.json => sub-tehranS01_space-other_T1w_seg-manual.json} (100%) rename derivatives/labels/sub-tehranS01/anat/{sub-tehranS01_T1w_seg-manual.nii.gz => sub-tehranS01_space-other_T1w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-tehranS01/anat/{sub-tehranS01_T2star_seg-manual.json => sub-tehranS01_space-other_T2star_seg-manual.json} (100%) rename derivatives/labels/sub-tehranS01/anat/{sub-tehranS01_T2star_seg-manual.nii.gz => sub-tehranS01_space-other_T2star_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-tehranS01/anat/{sub-tehranS01_T2w_labels-disc-manual.json => sub-tehranS01_space-other_T2w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-tehranS01/anat/{sub-tehranS01_T2w_labels-disc-manual.nii.gz => sub-tehranS01_space-other_T2w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-tehranS01/anat/{sub-tehranS01_T2w_seg-manual.json => sub-tehranS01_space-other_T2w_seg-manual.json} (100%) rename derivatives/labels/sub-tehranS01/anat/{sub-tehranS01_T2w_seg-manual.nii.gz => sub-tehranS01_space-other_T2w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-tehranS02/anat/{sub-tehranS02_T2star_seg-manual.json => sub-tehranS02_flip-1_mt-on_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-tehranS02/anat/{sub-tehranS02_flip-1_mt-on_MTS_seg-manual.nii.gz => sub-tehranS02_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-tehranS02/anat/{sub-tehranS02_flip-2_mt-off_MTS_seg-manual.json => sub-tehranS02_flip-2_mt-off_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-tehranS02/anat/{sub-tehranS02_flip-2_mt-off_MTS_seg-manual.nii.gz => sub-tehranS02_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-tehranS02/anat/{sub-tehranS02_T1w_RPI_r_labels-manual.nii.gz => sub-tehranS02_space-other_T1w_RPI_r_labels-manual.nii.gz} (100%) rename derivatives/labels/sub-tehranS02/anat/{sub-tehranS02_T1w_labels-disc-manual.json => sub-tehranS02_space-other_T1w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-tehranS02/anat/{sub-tehranS02_T1w_labels-disc-manual.nii.gz => sub-tehranS02_space-other_T1w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-tehranS02/anat/{sub-tehranS02_T1w_seg-manual.json => sub-tehranS02_space-other_T1w_seg-manual.json} (100%) rename derivatives/labels/sub-tehranS02/anat/{sub-tehranS02_T1w_seg-manual.nii.gz => sub-tehranS02_space-other_T1w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-tehranS02/anat/{sub-tehranS02_flip-1_mt-on_MTS_seg-manual.json => sub-tehranS02_space-other_T2star_seg-manual.json} (100%) rename derivatives/labels/sub-tehranS02/anat/{sub-tehranS02_T2star_seg-manual.nii.gz => sub-tehranS02_space-other_T2star_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-tehranS02/anat/{sub-tehranS02_T2w_labels-disc-manual.json => sub-tehranS02_space-other_T2w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-tehranS02/anat/{sub-tehranS02_T2w_labels-disc-manual.nii.gz => sub-tehranS02_space-other_T2w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-tehranS02/anat/{sub-tehranS02_T2w_seg-manual.json => sub-tehranS02_space-other_T2w_seg-manual.json} (100%) rename derivatives/labels/sub-tehranS02/anat/{sub-tehranS02_T2w_seg-manual.nii.gz => sub-tehranS02_space-other_T2w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-tehranS03/anat/{sub-tehranS03_T2star_seg-manual.json => sub-tehranS03_flip-1_mt-on_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-tehranS03/anat/{sub-tehranS03_flip-1_mt-on_MTS_seg-manual.nii.gz => sub-tehranS03_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-tehranS03/anat/{sub-tehranS03_flip-2_mt-off_MTS_seg-manual.json => sub-tehranS03_flip-2_mt-off_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-tehranS03/anat/{sub-tehranS03_flip-2_mt-off_MTS_seg-manual.nii.gz => sub-tehranS03_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-tehranS03/anat/{sub-tehranS03_T1w_RPI_r_labels-manual.nii.gz => sub-tehranS03_space-other_T1w_RPI_r_labels-manual.nii.gz} (100%) rename derivatives/labels/sub-tehranS03/anat/{sub-tehranS03_T1w_labels-disc-manual.json => sub-tehranS03_space-other_T1w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-tehranS03/anat/{sub-tehranS03_T1w_labels-disc-manual.nii.gz => sub-tehranS03_space-other_T1w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-tehranS03/anat/{sub-tehranS03_T1w_seg-manual.json => sub-tehranS03_space-other_T1w_seg-manual.json} (100%) rename derivatives/labels/sub-tehranS03/anat/{sub-tehranS03_T1w_seg-manual.nii.gz => sub-tehranS03_space-other_T1w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-tehranS03/anat/{sub-tehranS03_flip-1_mt-on_MTS_seg-manual.json => sub-tehranS03_space-other_T2star_seg-manual.json} (100%) rename derivatives/labels/sub-tehranS03/anat/{sub-tehranS03_T2star_seg-manual.nii.gz => sub-tehranS03_space-other_T2star_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-tehranS03/anat/{sub-tehranS03_T2w_labels-disc-manual.json => sub-tehranS03_space-other_T2w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-tehranS03/anat/{sub-tehranS03_T2w_labels-disc-manual.nii.gz => sub-tehranS03_space-other_T2w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-tehranS03/anat/{sub-tehranS03_T2w_seg-manual.json => sub-tehranS03_space-other_T2w_seg-manual.json} (100%) rename derivatives/labels/sub-tehranS03/anat/{sub-tehranS03_T2w_seg-manual.nii.gz => sub-tehranS03_space-other_T2w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-tehranS04/anat/{sub-tehranS04_T2star_seg-manual.json => sub-tehranS04_flip-1_mt-on_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-tehranS04/anat/{sub-tehranS04_flip-1_mt-on_MTS_seg-manual.nii.gz => sub-tehranS04_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-tehranS04/anat/{sub-tehranS04_flip-1_mt-on_MTS_seg-manual.json => sub-tehranS04_flip-2_mt-off_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-tehranS04/anat/{sub-tehranS04_flip-2_mt-off_MTS_seg-manual.nii.gz => sub-tehranS04_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-tehranS04/anat/{sub-tehranS04_T1w_labels-disc-manual.json => sub-tehranS04_space-other_T1w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-tehranS04/anat/{sub-tehranS04_T1w_labels-disc-manual.nii.gz => sub-tehranS04_space-other_T1w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-tehranS04/anat/{sub-tehranS04_T1w_seg-manual.json => sub-tehranS04_space-other_T1w_seg-manual.json} (100%) rename derivatives/labels/sub-tehranS04/anat/{sub-tehranS04_T1w_seg-manual.nii.gz => sub-tehranS04_space-other_T1w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-tehranS04/anat/{sub-tehranS04_flip-2_mt-off_MTS_seg-manual.json => sub-tehranS04_space-other_T2star_seg-manual.json} (100%) rename derivatives/labels/sub-tehranS04/anat/{sub-tehranS04_T2star_seg-manual.nii.gz => sub-tehranS04_space-other_T2star_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-tehranS04/anat/{sub-tehranS04_T2w_labels-disc-manual.json => sub-tehranS04_space-other_T2w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-tehranS04/anat/{sub-tehranS04_T2w_labels-disc-manual.nii.gz => sub-tehranS04_space-other_T2w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-tehranS04/anat/{sub-tehranS04_T2w_seg-manual.json => sub-tehranS04_space-other_T2w_seg-manual.json} (100%) rename derivatives/labels/sub-tehranS04/anat/{sub-tehranS04_T2w_seg-manual.nii.gz => sub-tehranS04_space-other_T2w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-tehranS05/anat/{sub-tehranS05_flip-1_mt-on_MTS_seg-manual.json => sub-tehranS05_flip-1_mt-on_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-tehranS05/anat/{sub-tehranS05_flip-1_mt-on_MTS_seg-manual.nii.gz => sub-tehranS05_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-tehranS05/anat/{sub-tehranS05_T2star_seg-manual.json => sub-tehranS05_flip-2_mt-off_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-tehranS05/anat/{sub-tehranS05_flip-2_mt-off_MTS_seg-manual.nii.gz => sub-tehranS05_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-tehranS05/anat/{sub-tehranS05_T1w_labels-disc-manual.json => sub-tehranS05_space-other_T1w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-tehranS05/anat/{sub-tehranS05_T1w_labels-disc-manual.nii.gz => sub-tehranS05_space-other_T1w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-tehranS05/anat/{sub-tehranS05_T1w_seg-manual.json => sub-tehranS05_space-other_T1w_seg-manual.json} (100%) rename derivatives/labels/sub-tehranS05/anat/{sub-tehranS05_T1w_seg-manual.nii.gz => sub-tehranS05_space-other_T1w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-tehranS05/anat/{sub-tehranS05_flip-2_mt-off_MTS_seg-manual.json => sub-tehranS05_space-other_T2star_seg-manual.json} (100%) rename derivatives/labels/sub-tehranS05/anat/{sub-tehranS05_T2star_seg-manual.nii.gz => sub-tehranS05_space-other_T2star_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-tehranS05/anat/{sub-tehranS05_T2w_labels-disc-manual.json => sub-tehranS05_space-other_T2w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-tehranS05/anat/{sub-tehranS05_T2w_labels-disc-manual.nii.gz => sub-tehranS05_space-other_T2w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-tehranS05/anat/{sub-tehranS05_T2w_seg-manual.json => sub-tehranS05_space-other_T2w_seg-manual.json} (100%) rename derivatives/labels/sub-tehranS05/anat/{sub-tehranS05_T2w_seg-manual.nii.gz => sub-tehranS05_space-other_T2w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-tehranS06/anat/{sub-tehranS06_flip-1_mt-on_MTS_seg-manual.json => sub-tehranS06_flip-1_mt-on_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-tehranS06/anat/{sub-tehranS06_flip-1_mt-on_MTS_seg-manual.nii.gz => sub-tehranS06_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-tehranS06/anat/{sub-tehranS06_flip-2_mt-off_MTS_seg-manual.json => sub-tehranS06_flip-2_mt-off_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-tehranS06/anat/{sub-tehranS06_flip-2_mt-off_MTS_seg-manual.nii.gz => sub-tehranS06_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-tehranS06/anat/{sub-tehranS06_T1w_labels-disc-manual.json => sub-tehranS06_space-other_T1w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-tehranS06/anat/{sub-tehranS06_T1w_labels-disc-manual.nii.gz => sub-tehranS06_space-other_T1w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-tehranS06/anat/{sub-tehranS06_T1w_seg-manual.json => sub-tehranS06_space-other_T1w_seg-manual.json} (100%) rename derivatives/labels/sub-tehranS06/anat/{sub-tehranS06_T1w_seg-manual.nii.gz => sub-tehranS06_space-other_T1w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-tehranS06/anat/{sub-tehranS06_T2star_seg-manual.json => sub-tehranS06_space-other_T2star_seg-manual.json} (100%) rename derivatives/labels/sub-tehranS06/anat/{sub-tehranS06_T2star_seg-manual.nii.gz => sub-tehranS06_space-other_T2star_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-tehranS06/anat/{sub-tehranS06_T2w_labels-disc-manual.json => sub-tehranS06_space-other_T2w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-tehranS06/anat/{sub-tehranS06_T2w_labels-disc-manual.nii.gz => sub-tehranS06_space-other_T2w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-tehranS06/anat/{sub-tehranS06_T2w_seg-manual.json => sub-tehranS06_space-other_T2w_seg-manual.json} (100%) rename derivatives/labels/sub-tehranS06/anat/{sub-tehranS06_T2w_seg-manual.nii.gz => sub-tehranS06_space-other_T2w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-tokyo750w01/anat/{sub-tokyo750w01_flip-1_mt-on_MTS_seg-manual.json => sub-tokyo750w01_flip-1_mt-on_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-tokyo750w01/anat/{sub-tokyo750w01_flip-1_mt-on_MTS_seg-manual.nii.gz => sub-tokyo750w01_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-tokyo750w01/anat/{sub-tokyo750w01_flip-2_mt-off_MTS_seg-manual.json => sub-tokyo750w01_flip-2_mt-off_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-tokyo750w01/anat/{sub-tokyo750w01_flip-2_mt-off_MTS_seg-manual.nii.gz => sub-tokyo750w01_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-tokyo750w01/anat/{sub-tokyo750w01_T1w_labels-disc-manual.json => sub-tokyo750w01_space-other_T1w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-tokyo750w01/anat/{sub-tokyo750w01_T1w_labels-disc-manual.nii.gz => sub-tokyo750w01_space-other_T1w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-tokyo750w01/anat/{sub-tokyo750w01_T1w_seg-manual.json => sub-tokyo750w01_space-other_T1w_seg-manual.json} (100%) rename derivatives/labels/sub-tokyo750w01/anat/{sub-tokyo750w01_T1w_seg-manual.nii.gz => sub-tokyo750w01_space-other_T1w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-tokyo750w01/anat/{sub-tokyo750w01_T2star_seg-manual.json => sub-tokyo750w01_space-other_T2star_seg-manual.json} (100%) rename derivatives/labels/sub-tokyo750w01/anat/{sub-tokyo750w01_T2star_seg-manual.nii.gz => sub-tokyo750w01_space-other_T2star_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-tokyo750w01/anat/{sub-tokyo750w01_T2w_labels-disc-manual.json => sub-tokyo750w01_space-other_T2w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-tokyo750w01/anat/{sub-tokyo750w01_T2w_labels-disc-manual.nii.gz => sub-tokyo750w01_space-other_T2w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-tokyo750w01/anat/{sub-tokyo750w01_T2w_seg-manual.json => sub-tokyo750w01_space-other_T2w_seg-manual.json} (100%) rename derivatives/labels/sub-tokyo750w01/anat/{sub-tokyo750w01_T2w_seg-manual.nii.gz => sub-tokyo750w01_space-other_T2w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-tokyo750w02/anat/{sub-tokyo750w02_flip-1_mt-on_MTS_seg-manual.json => sub-tokyo750w02_flip-1_mt-on_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-tokyo750w02/anat/{sub-tokyo750w02_flip-1_mt-on_MTS_seg-manual.nii.gz => sub-tokyo750w02_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-tokyo750w02/anat/{sub-tokyo750w02_flip-2_mt-off_MTS_seg-manual.json => sub-tokyo750w02_flip-2_mt-off_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-tokyo750w02/anat/{sub-tokyo750w02_flip-2_mt-off_MTS_seg-manual.nii.gz => sub-tokyo750w02_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-tokyo750w02/anat/{sub-tokyo750w02_T1w_labels-disc-manual.json => sub-tokyo750w02_space-other_T1w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-tokyo750w02/anat/{sub-tokyo750w02_T1w_labels-disc-manual.nii.gz => sub-tokyo750w02_space-other_T1w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-tokyo750w02/anat/{sub-tokyo750w02_T1w_seg-manual.json => sub-tokyo750w02_space-other_T1w_seg-manual.json} (100%) rename derivatives/labels/sub-tokyo750w02/anat/{sub-tokyo750w02_T1w_seg-manual.nii.gz => sub-tokyo750w02_space-other_T1w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-tokyo750w02/anat/{sub-tokyo750w02_T2star_seg-manual.json => sub-tokyo750w02_space-other_T2star_seg-manual.json} (100%) rename derivatives/labels/sub-tokyo750w02/anat/{sub-tokyo750w02_T2star_seg-manual.nii.gz => sub-tokyo750w02_space-other_T2star_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-tokyo750w02/anat/{sub-tokyo750w02_T2w_labels-disc-manual.json => sub-tokyo750w02_space-other_T2w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-tokyo750w02/anat/{sub-tokyo750w02_T2w_labels-disc-manual.nii.gz => sub-tokyo750w02_space-other_T2w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-tokyo750w02/anat/{sub-tokyo750w02_T2w_seg-manual.json => sub-tokyo750w02_space-other_T2w_seg-manual.json} (100%) rename derivatives/labels/sub-tokyo750w02/anat/{sub-tokyo750w02_T2w_seg-manual.nii.gz => sub-tokyo750w02_space-other_T2w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-tokyo750w03/anat/{sub-tokyo750w03_flip-1_mt-on_MTS_seg-manual.json => sub-tokyo750w03_flip-1_mt-on_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-tokyo750w03/anat/{sub-tokyo750w03_flip-1_mt-on_MTS_seg-manual.nii.gz => sub-tokyo750w03_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-tokyo750w03/anat/{sub-tokyo750w03_flip-2_mt-off_MTS_seg-manual.json => sub-tokyo750w03_flip-2_mt-off_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-tokyo750w03/anat/{sub-tokyo750w03_flip-2_mt-off_MTS_seg-manual.nii.gz => sub-tokyo750w03_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-tokyo750w03/anat/{sub-tokyo750w03_T1w_labels-disc-manual.json => sub-tokyo750w03_space-other_T1w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-tokyo750w03/anat/{sub-tokyo750w03_T1w_labels-disc-manual.nii.gz => sub-tokyo750w03_space-other_T1w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-tokyo750w03/anat/{sub-tokyo750w03_T1w_seg-manual.json => sub-tokyo750w03_space-other_T1w_seg-manual.json} (100%) rename derivatives/labels/sub-tokyo750w03/anat/{sub-tokyo750w03_T1w_seg-manual.nii.gz => sub-tokyo750w03_space-other_T1w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-tokyo750w03/anat/{sub-tokyo750w03_T2star_seg-manual.json => sub-tokyo750w03_space-other_T2star_seg-manual.json} (100%) rename derivatives/labels/sub-tokyo750w03/anat/{sub-tokyo750w03_T2star_seg-manual.nii.gz => sub-tokyo750w03_space-other_T2star_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-tokyo750w03/anat/{sub-tokyo750w03_T2w_labels-disc-manual.json => sub-tokyo750w03_space-other_T2w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-tokyo750w03/anat/{sub-tokyo750w03_T2w_labels-disc-manual.nii.gz => sub-tokyo750w03_space-other_T2w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-tokyo750w03/anat/{sub-tokyo750w03_T2w_seg-manual.json => sub-tokyo750w03_space-other_T2w_seg-manual.json} (100%) rename derivatives/labels/sub-tokyo750w03/anat/{sub-tokyo750w03_T2w_seg-manual.nii.gz => sub-tokyo750w03_space-other_T2w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-tokyo750w04/anat/{sub-tokyo750w04_flip-1_mt-on_MTS_seg-manual.json => sub-tokyo750w04_flip-1_mt-on_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-tokyo750w04/anat/{sub-tokyo750w04_flip-1_mt-on_MTS_seg-manual.nii.gz => sub-tokyo750w04_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-tokyo750w04/anat/{sub-tokyo750w04_flip-2_mt-off_MTS_seg-manual.json => sub-tokyo750w04_flip-2_mt-off_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-tokyo750w04/anat/{sub-tokyo750w04_flip-2_mt-off_MTS_seg-manual.nii.gz => sub-tokyo750w04_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-tokyo750w04/anat/{sub-tokyo750w04_T1w_labels-disc-manual.json => sub-tokyo750w04_space-other_T1w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-tokyo750w04/anat/{sub-tokyo750w04_T1w_labels-disc-manual.nii.gz => sub-tokyo750w04_space-other_T1w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-tokyo750w04/anat/{sub-tokyo750w04_T1w_seg-manual.json => sub-tokyo750w04_space-other_T1w_seg-manual.json} (100%) rename derivatives/labels/sub-tokyo750w04/anat/{sub-tokyo750w04_T1w_seg-manual.nii.gz => sub-tokyo750w04_space-other_T1w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-tokyo750w04/anat/{sub-tokyo750w04_T2star_seg-manual.json => sub-tokyo750w04_space-other_T2star_seg-manual.json} (100%) rename derivatives/labels/sub-tokyo750w04/anat/{sub-tokyo750w04_T2star_seg-manual.nii.gz => sub-tokyo750w04_space-other_T2star_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-tokyo750w04/anat/{sub-tokyo750w04_T2w_labels-disc-manual.json => sub-tokyo750w04_space-other_T2w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-tokyo750w04/anat/{sub-tokyo750w04_T2w_labels-disc-manual.nii.gz => sub-tokyo750w04_space-other_T2w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-tokyo750w04/anat/{sub-tokyo750w04_T2w_seg-manual.json => sub-tokyo750w04_space-other_T2w_seg-manual.json} (100%) rename derivatives/labels/sub-tokyo750w04/anat/{sub-tokyo750w04_T2w_seg-manual.nii.gz => sub-tokyo750w04_space-other_T2w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-tokyo750w05/anat/{sub-tokyo750w05_flip-1_mt-on_MTS_seg-manual.json => sub-tokyo750w05_flip-1_mt-on_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-tokyo750w05/anat/{sub-tokyo750w05_flip-1_mt-on_MTS_seg-manual.nii.gz => sub-tokyo750w05_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-tokyo750w05/anat/{sub-tokyo750w05_flip-2_mt-off_MTS_seg-manual.json => sub-tokyo750w05_flip-2_mt-off_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-tokyo750w05/anat/{sub-tokyo750w05_flip-2_mt-off_MTS_seg-manual.nii.gz => sub-tokyo750w05_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-tokyo750w05/anat/{sub-tokyo750w05_T1w_labels-disc-manual.json => sub-tokyo750w05_space-other_T1w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-tokyo750w05/anat/{sub-tokyo750w05_T1w_labels-disc-manual.nii.gz => sub-tokyo750w05_space-other_T1w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-tokyo750w05/anat/{sub-tokyo750w05_T1w_seg-manual.json => sub-tokyo750w05_space-other_T1w_seg-manual.json} (100%) rename derivatives/labels/sub-tokyo750w05/anat/{sub-tokyo750w05_T1w_seg-manual.nii.gz => sub-tokyo750w05_space-other_T1w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-tokyo750w05/anat/{sub-tokyo750w05_T2star_gmseg-manual.json => sub-tokyo750w05_space-other_T2star_gmseg-manual.json} (100%) rename derivatives/labels/sub-tokyo750w05/anat/{sub-tokyo750w05_T2star_gmseg-manual.nii.gz => sub-tokyo750w05_space-other_T2star_gmseg-manual.nii.gz} (100%) rename derivatives/labels/sub-tokyo750w05/anat/{sub-tokyo750w05_T2star_seg-manual.json => sub-tokyo750w05_space-other_T2star_seg-manual.json} (100%) rename derivatives/labels/sub-tokyo750w05/anat/{sub-tokyo750w05_T2star_seg-manual.nii.gz => sub-tokyo750w05_space-other_T2star_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-tokyo750w05/anat/{sub-tokyo750w05_T2w_labels-disc-manual.json => sub-tokyo750w05_space-other_T2w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-tokyo750w05/anat/{sub-tokyo750w05_T2w_labels-disc-manual.nii.gz => sub-tokyo750w05_space-other_T2w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-tokyo750w05/anat/{sub-tokyo750w05_T2w_seg-manual.json => sub-tokyo750w05_space-other_T2w_seg-manual.json} (100%) rename derivatives/labels/sub-tokyo750w05/anat/{sub-tokyo750w05_T2w_seg-manual.nii.gz => sub-tokyo750w05_space-other_T2w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-tokyo750w06/anat/{sub-tokyo750w06_flip-1_mt-on_MTS_seg-manual.json => sub-tokyo750w06_flip-1_mt-on_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-tokyo750w06/anat/{sub-tokyo750w06_flip-1_mt-on_MTS_seg-manual.nii.gz => sub-tokyo750w06_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-tokyo750w06/anat/{sub-tokyo750w06_flip-2_mt-off_MTS_seg-manual.json => sub-tokyo750w06_flip-2_mt-off_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-tokyo750w06/anat/{sub-tokyo750w06_flip-2_mt-off_MTS_seg-manual.nii.gz => sub-tokyo750w06_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-tokyo750w06/anat/{sub-tokyo750w06_T1w_labels-disc-manual.json => sub-tokyo750w06_space-other_T1w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-tokyo750w06/anat/{sub-tokyo750w06_T1w_labels-disc-manual.nii.gz => sub-tokyo750w06_space-other_T1w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-tokyo750w06/anat/{sub-tokyo750w06_T1w_seg-manual.json => sub-tokyo750w06_space-other_T1w_seg-manual.json} (100%) rename derivatives/labels/sub-tokyo750w06/anat/{sub-tokyo750w06_T1w_seg-manual.nii.gz => sub-tokyo750w06_space-other_T1w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-tokyo750w06/anat/{sub-tokyo750w06_T2star_gmseg-manual.json => sub-tokyo750w06_space-other_T2star_gmseg-manual.json} (100%) rename derivatives/labels/sub-tokyo750w06/anat/{sub-tokyo750w06_T2star_gmseg-manual.nii.gz => sub-tokyo750w06_space-other_T2star_gmseg-manual.nii.gz} (100%) rename derivatives/labels/sub-tokyo750w06/anat/{sub-tokyo750w06_T2star_seg-manual.json => sub-tokyo750w06_space-other_T2star_seg-manual.json} (100%) rename derivatives/labels/sub-tokyo750w06/anat/{sub-tokyo750w06_T2star_seg-manual.nii.gz => sub-tokyo750w06_space-other_T2star_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-tokyo750w06/anat/{sub-tokyo750w06_T2w_labels-disc-manual.json => sub-tokyo750w06_space-other_T2w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-tokyo750w06/anat/{sub-tokyo750w06_T2w_labels-disc-manual.nii.gz => sub-tokyo750w06_space-other_T2w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-tokyo750w06/anat/{sub-tokyo750w06_T2w_seg-manual.json => sub-tokyo750w06_space-other_T2w_seg-manual.json} (100%) rename derivatives/labels/sub-tokyo750w06/anat/{sub-tokyo750w06_T2w_seg-manual.nii.gz => sub-tokyo750w06_space-other_T2w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-tokyo750w07/anat/{sub-tokyo750w07_T2star_seg-manual.json => sub-tokyo750w07_flip-1_mt-on_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-tokyo750w07/anat/{sub-tokyo750w07_flip-1_mt-on_MTS_seg-manual.nii.gz => sub-tokyo750w07_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-tokyo750w07/anat/{sub-tokyo750w07_flip-2_mt-off_MTS_seg-manual.json => sub-tokyo750w07_flip-2_mt-off_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-tokyo750w07/anat/{sub-tokyo750w07_flip-2_mt-off_MTS_seg-manual.nii.gz => sub-tokyo750w07_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-tokyo750w07/anat/{sub-tokyo750w07_T1w_labels-disc-manual.json => sub-tokyo750w07_space-other_T1w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-tokyo750w07/anat/{sub-tokyo750w07_T1w_labels-disc-manual.nii.gz => sub-tokyo750w07_space-other_T1w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-tokyo750w07/anat/{sub-tokyo750w07_T1w_seg-manual.json => sub-tokyo750w07_space-other_T1w_seg-manual.json} (100%) rename derivatives/labels/sub-tokyo750w07/anat/{sub-tokyo750w07_T1w_seg-manual.nii.gz => sub-tokyo750w07_space-other_T1w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-tokyo750w07/anat/{sub-tokyo750w07_flip-1_mt-on_MTS_seg-manual.json => sub-tokyo750w07_space-other_T2star_seg-manual.json} (100%) rename derivatives/labels/sub-tokyo750w07/anat/{sub-tokyo750w07_T2star_seg-manual.nii.gz => sub-tokyo750w07_space-other_T2star_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-tokyo750w07/anat/{sub-tokyo750w07_T2w_labels-disc-manual.json => sub-tokyo750w07_space-other_T2w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-tokyo750w07/anat/{sub-tokyo750w07_T2w_labels-disc-manual.nii.gz => sub-tokyo750w07_space-other_T2w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-tokyo750w07/anat/{sub-tokyo750w07_T2w_seg-manual.json => sub-tokyo750w07_space-other_T2w_seg-manual.json} (100%) rename derivatives/labels/sub-tokyo750w07/anat/{sub-tokyo750w07_T2w_seg-manual.nii.gz => sub-tokyo750w07_space-other_T2w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-tokyoIngenia01/anat/{sub-tokyoIngenia01_T2star_seg-manual.json => sub-tokyoIngenia01_flip-1_mt-on_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-tokyoIngenia01/anat/{sub-tokyoIngenia01_flip-1_mt-on_MTS_seg-manual.nii.gz => sub-tokyoIngenia01_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-tokyoIngenia01/anat/{sub-tokyoIngenia01_T2w_seg-manual.json => sub-tokyoIngenia01_flip-2_mt-off_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-tokyoIngenia01/anat/{sub-tokyoIngenia01_flip-2_mt-off_MTS_seg-manual.nii.gz => sub-tokyoIngenia01_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-tokyoIngenia01/anat/{sub-tokyoIngenia01_T1w_labels-disc-manual.json => sub-tokyoIngenia01_space-other_T1w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-tokyoIngenia01/anat/{sub-tokyoIngenia01_T1w_labels-disc-manual.nii.gz => sub-tokyoIngenia01_space-other_T1w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-tokyoIngenia01/anat/{sub-tokyoIngenia01_T1w_seg-manual.json => sub-tokyoIngenia01_space-other_T1w_seg-manual.json} (100%) rename derivatives/labels/sub-tokyoIngenia01/anat/{sub-tokyoIngenia01_T1w_seg-manual.nii.gz => sub-tokyoIngenia01_space-other_T1w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-tokyoIngenia01/anat/{sub-tokyoIngenia01_T2star_gmseg-manual.json => sub-tokyoIngenia01_space-other_T2star_gmseg-manual.json} (100%) rename derivatives/labels/sub-tokyoIngenia01/anat/{sub-tokyoIngenia01_T2star_gmseg-manual.nii.gz => sub-tokyoIngenia01_space-other_T2star_gmseg-manual.nii.gz} (100%) rename derivatives/labels/sub-tokyoIngenia01/anat/{sub-tokyoIngenia01_flip-1_mt-on_MTS_seg-manual.json => sub-tokyoIngenia01_space-other_T2star_seg-manual.json} (100%) rename derivatives/labels/sub-tokyoIngenia01/anat/{sub-tokyoIngenia01_T2star_seg-manual.nii.gz => sub-tokyoIngenia01_space-other_T2star_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-tokyoIngenia01/anat/{sub-tokyoIngenia01_T2w_labels-disc-manual.json => sub-tokyoIngenia01_space-other_T2w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-tokyoIngenia01/anat/{sub-tokyoIngenia01_T2w_labels-disc-manual.nii.gz => sub-tokyoIngenia01_space-other_T2w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-tokyoIngenia01/anat/{sub-tokyoIngenia01_flip-2_mt-off_MTS_seg-manual.json => sub-tokyoIngenia01_space-other_T2w_seg-manual.json} (100%) rename derivatives/labels/sub-tokyoIngenia01/anat/{sub-tokyoIngenia01_T2w_seg-manual.nii.gz => sub-tokyoIngenia01_space-other_T2w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-tokyoIngenia02/anat/{sub-tokyoIngenia02_flip-1_mt-on_MTS_seg-manual.json => sub-tokyoIngenia02_flip-1_mt-on_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-tokyoIngenia02/anat/{sub-tokyoIngenia02_flip-1_mt-on_MTS_seg-manual.nii.gz => sub-tokyoIngenia02_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-tokyoIngenia02/anat/{sub-tokyoIngenia02_flip-2_mt-off_MTS_seg-manual.json => sub-tokyoIngenia02_flip-2_mt-off_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-tokyoIngenia02/anat/{sub-tokyoIngenia02_flip-2_mt-off_MTS_seg-manual.nii.gz => sub-tokyoIngenia02_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-tokyoIngenia02/anat/{sub-tokyoIngenia02_T1w_labels-disc-manual.json => sub-tokyoIngenia02_space-other_T1w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-tokyoIngenia02/anat/{sub-tokyoIngenia02_T1w_labels-disc-manual.nii.gz => sub-tokyoIngenia02_space-other_T1w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-tokyoIngenia02/anat/{sub-tokyoIngenia02_T1w_seg-manual.json => sub-tokyoIngenia02_space-other_T1w_seg-manual.json} (100%) rename derivatives/labels/sub-tokyoIngenia02/anat/{sub-tokyoIngenia02_T1w_seg-manual.nii.gz => sub-tokyoIngenia02_space-other_T1w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-tokyoIngenia02/anat/{sub-tokyoIngenia02_T2star_gmseg-manual.json => sub-tokyoIngenia02_space-other_T2star_gmseg-manual.json} (100%) rename derivatives/labels/sub-tokyoIngenia02/anat/{sub-tokyoIngenia02_T2star_gmseg-manual.nii.gz => sub-tokyoIngenia02_space-other_T2star_gmseg-manual.nii.gz} (100%) rename derivatives/labels/sub-tokyoIngenia02/anat/{sub-tokyoIngenia02_T2star_seg-manual.json => sub-tokyoIngenia02_space-other_T2star_seg-manual.json} (100%) rename derivatives/labels/sub-tokyoIngenia02/anat/{sub-tokyoIngenia02_T2star_seg-manual.nii.gz => sub-tokyoIngenia02_space-other_T2star_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-tokyoIngenia02/anat/{sub-tokyoIngenia02_T2w_labels-disc-manual.json => sub-tokyoIngenia02_space-other_T2w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-tokyoIngenia02/anat/{sub-tokyoIngenia02_T2w_labels-disc-manual.nii.gz => sub-tokyoIngenia02_space-other_T2w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-tokyoIngenia02/anat/{sub-tokyoIngenia02_T2w_seg-manual.json => sub-tokyoIngenia02_space-other_T2w_seg-manual.json} (100%) rename derivatives/labels/sub-tokyoIngenia02/anat/{sub-tokyoIngenia02_T2w_seg-manual.nii.gz => sub-tokyoIngenia02_space-other_T2w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-tokyoIngenia03/anat/{sub-tokyoIngenia03_T2star_seg-manual.json => sub-tokyoIngenia03_flip-1_mt-on_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-tokyoIngenia03/anat/{sub-tokyoIngenia03_flip-1_mt-on_MTS_seg-manual.nii.gz => sub-tokyoIngenia03_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-tokyoIngenia03/anat/{sub-tokyoIngenia03_flip-1_mt-on_MTS_seg-manual.json => sub-tokyoIngenia03_flip-2_mt-off_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-tokyoIngenia03/anat/{sub-tokyoIngenia03_flip-2_mt-off_MTS_seg-manual.nii.gz => sub-tokyoIngenia03_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-tokyoIngenia03/anat/{sub-tokyoIngenia03_T1w_RPI_r_labels-manual.nii.gz => sub-tokyoIngenia03_space-other_T1w_RPI_r_labels-manual.nii.gz} (100%) rename derivatives/labels/sub-tokyoIngenia03/anat/{sub-tokyoIngenia03_T1w_labels-disc-manual.json => sub-tokyoIngenia03_space-other_T1w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-tokyoIngenia03/anat/{sub-tokyoIngenia03_T1w_labels-disc-manual.nii.gz => sub-tokyoIngenia03_space-other_T1w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-tokyoIngenia03/anat/{sub-tokyoIngenia03_T1w_seg-manual.json => sub-tokyoIngenia03_space-other_T1w_seg-manual.json} (100%) rename derivatives/labels/sub-tokyoIngenia03/anat/{sub-tokyoIngenia03_T1w_seg-manual.nii.gz => sub-tokyoIngenia03_space-other_T1w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-tokyoIngenia03/anat/{sub-tokyoIngenia03_T2star_gmseg-manual.json => sub-tokyoIngenia03_space-other_T2star_gmseg-manual.json} (100%) rename derivatives/labels/sub-tokyoIngenia03/anat/{sub-tokyoIngenia03_T2star_gmseg-manual.nii.gz => sub-tokyoIngenia03_space-other_T2star_gmseg-manual.nii.gz} (100%) rename derivatives/labels/sub-tokyoIngenia03/anat/{sub-tokyoIngenia03_flip-2_mt-off_MTS_seg-manual.json => sub-tokyoIngenia03_space-other_T2star_seg-manual.json} (100%) rename derivatives/labels/sub-tokyoIngenia03/anat/{sub-tokyoIngenia03_T2star_seg-manual.nii.gz => sub-tokyoIngenia03_space-other_T2star_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-tokyoIngenia03/anat/{sub-tokyoIngenia03_T2w_labels-disc-manual.json => sub-tokyoIngenia03_space-other_T2w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-tokyoIngenia03/anat/{sub-tokyoIngenia03_T2w_labels-disc-manual.nii.gz => sub-tokyoIngenia03_space-other_T2w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-tokyoIngenia03/anat/{sub-tokyoIngenia03_T2w_seg-manual.json => sub-tokyoIngenia03_space-other_T2w_seg-manual.json} (100%) rename derivatives/labels/sub-tokyoIngenia03/anat/{sub-tokyoIngenia03_T2w_seg-manual.nii.gz => sub-tokyoIngenia03_space-other_T2w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-tokyoIngenia04/anat/{sub-tokyoIngenia04_flip-1_mt-on_MTS_seg-manual.json => sub-tokyoIngenia04_flip-1_mt-on_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-tokyoIngenia04/anat/{sub-tokyoIngenia04_flip-1_mt-on_MTS_seg-manual.nii.gz => sub-tokyoIngenia04_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-tokyoIngenia04/anat/{sub-tokyoIngenia04_flip-2_mt-off_MTS_seg-manual.json => sub-tokyoIngenia04_flip-2_mt-off_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-tokyoIngenia04/anat/{sub-tokyoIngenia04_flip-2_mt-off_MTS_seg-manual.nii.gz => sub-tokyoIngenia04_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-tokyoIngenia04/anat/{sub-tokyoIngenia04_T1w_labels-disc-manual.json => sub-tokyoIngenia04_space-other_T1w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-tokyoIngenia04/anat/{sub-tokyoIngenia04_T1w_labels-disc-manual.nii.gz => sub-tokyoIngenia04_space-other_T1w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-tokyoIngenia04/anat/{sub-tokyoIngenia04_T1w_seg-manual.json => sub-tokyoIngenia04_space-other_T1w_seg-manual.json} (100%) rename derivatives/labels/sub-tokyoIngenia04/anat/{sub-tokyoIngenia04_T1w_seg-manual.nii.gz => sub-tokyoIngenia04_space-other_T1w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-tokyoIngenia04/anat/{sub-tokyoIngenia04_T2star_gmseg-manual.json => sub-tokyoIngenia04_space-other_T2star_gmseg-manual.json} (100%) rename derivatives/labels/sub-tokyoIngenia04/anat/{sub-tokyoIngenia04_T2star_gmseg-manual.nii.gz => sub-tokyoIngenia04_space-other_T2star_gmseg-manual.nii.gz} (100%) rename derivatives/labels/sub-tokyoIngenia04/anat/{sub-tokyoIngenia04_T2star_seg-manual.json => sub-tokyoIngenia04_space-other_T2star_seg-manual.json} (100%) rename derivatives/labels/sub-tokyoIngenia04/anat/{sub-tokyoIngenia04_T2star_seg-manual.nii.gz => sub-tokyoIngenia04_space-other_T2star_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-tokyoIngenia04/anat/{sub-tokyoIngenia04_T2w_labels-disc-manual.json => sub-tokyoIngenia04_space-other_T2w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-tokyoIngenia04/anat/{sub-tokyoIngenia04_T2w_labels-disc-manual.nii.gz => sub-tokyoIngenia04_space-other_T2w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-tokyoIngenia04/anat/{sub-tokyoIngenia04_T2w_seg-manual.json => sub-tokyoIngenia04_space-other_T2w_seg-manual.json} (100%) rename derivatives/labels/sub-tokyoIngenia04/anat/{sub-tokyoIngenia04_T2w_seg-manual.nii.gz => sub-tokyoIngenia04_space-other_T2w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-tokyoIngenia05/anat/{sub-tokyoIngenia05_T2w_seg-manual.json => sub-tokyoIngenia05_flip-1_mt-on_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-tokyoIngenia05/anat/{sub-tokyoIngenia05_flip-1_mt-on_MTS_seg-manual.nii.gz => sub-tokyoIngenia05_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-tokyoIngenia05/anat/{sub-tokyoIngenia05_flip-1_mt-on_MTS_seg-manual.json => sub-tokyoIngenia05_flip-2_mt-off_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-tokyoIngenia05/anat/{sub-tokyoIngenia05_flip-2_mt-off_MTS_seg-manual.nii.gz => sub-tokyoIngenia05_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-tokyoIngenia05/anat/{sub-tokyoIngenia05_T1w_labels-disc-manual.json => sub-tokyoIngenia05_space-other_T1w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-tokyoIngenia05/anat/{sub-tokyoIngenia05_T1w_labels-disc-manual.nii.gz => sub-tokyoIngenia05_space-other_T1w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-tokyoIngenia05/anat/{sub-tokyoIngenia05_T1w_seg-manual.json => sub-tokyoIngenia05_space-other_T1w_seg-manual.json} (100%) rename derivatives/labels/sub-tokyoIngenia05/anat/{sub-tokyoIngenia05_T1w_seg-manual.nii.gz => sub-tokyoIngenia05_space-other_T1w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-tokyoIngenia05/anat/{sub-tokyoIngenia05_T2star_seg-manual.json => sub-tokyoIngenia05_space-other_T2star_seg-manual.json} (100%) rename derivatives/labels/sub-tokyoIngenia05/anat/{sub-tokyoIngenia05_T2star_seg-manual.nii.gz => sub-tokyoIngenia05_space-other_T2star_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-tokyoIngenia05/anat/{sub-tokyoIngenia05_T2w_csfseg-manual.json => sub-tokyoIngenia05_space-other_T2w_csfseg-manual.json} (100%) rename derivatives/labels/sub-tokyoIngenia05/anat/{sub-tokyoIngenia05_T2w_csfseg-manual.nii.gz => sub-tokyoIngenia05_space-other_T2w_csfseg-manual.nii.gz} (100%) rename derivatives/labels/sub-tokyoIngenia05/anat/{sub-tokyoIngenia05_T2w_labels-disc-manual.json => sub-tokyoIngenia05_space-other_T2w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-tokyoIngenia05/anat/{sub-tokyoIngenia05_T2w_labels-disc-manual.nii.gz => sub-tokyoIngenia05_space-other_T2w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-tokyoIngenia05/anat/{sub-tokyoIngenia05_flip-2_mt-off_MTS_seg-manual.json => sub-tokyoIngenia05_space-other_T2w_seg-manual.json} (100%) rename derivatives/labels/sub-tokyoIngenia05/anat/{sub-tokyoIngenia05_T2w_seg-manual.nii.gz => sub-tokyoIngenia05_space-other_T2w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-tokyoIngenia06/anat/{sub-tokyoIngenia06_T2star_seg-manual.json => sub-tokyoIngenia06_flip-1_mt-on_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-tokyoIngenia06/anat/{sub-tokyoIngenia06_flip-1_mt-on_MTS_seg-manual.nii.gz => sub-tokyoIngenia06_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-tokyoIngenia06/anat/{sub-tokyoIngenia06_flip-2_mt-off_MTS_seg-manual.json => sub-tokyoIngenia06_flip-2_mt-off_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-tokyoIngenia06/anat/{sub-tokyoIngenia06_flip-2_mt-off_MTS_seg-manual.nii.gz => sub-tokyoIngenia06_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-tokyoIngenia06/anat/{sub-tokyoIngenia06_T1w_labels-disc-manual.json => sub-tokyoIngenia06_space-other_T1w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-tokyoIngenia06/anat/{sub-tokyoIngenia06_T1w_labels-disc-manual.nii.gz => sub-tokyoIngenia06_space-other_T1w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-tokyoIngenia06/anat/{sub-tokyoIngenia06_T1w_seg-manual.json => sub-tokyoIngenia06_space-other_T1w_seg-manual.json} (100%) rename derivatives/labels/sub-tokyoIngenia06/anat/{sub-tokyoIngenia06_T1w_seg-manual.nii.gz => sub-tokyoIngenia06_space-other_T1w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-tokyoIngenia06/anat/{sub-tokyoIngenia06_T2w_seg-manual.json => sub-tokyoIngenia06_space-other_T2star_seg-manual.json} (100%) rename derivatives/labels/sub-tokyoIngenia06/anat/{sub-tokyoIngenia06_T2star_seg-manual.nii.gz => sub-tokyoIngenia06_space-other_T2star_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-tokyoIngenia06/anat/{sub-tokyoIngenia06_T2w_csfseg-manual.json => sub-tokyoIngenia06_space-other_T2w_csfseg-manual.json} (100%) rename derivatives/labels/sub-tokyoIngenia06/anat/{sub-tokyoIngenia06_T2w_csfseg-manual.nii.gz => sub-tokyoIngenia06_space-other_T2w_csfseg-manual.nii.gz} (100%) rename derivatives/labels/sub-tokyoIngenia06/anat/{sub-tokyoIngenia06_T2w_labels-disc-manual.json => sub-tokyoIngenia06_space-other_T2w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-tokyoIngenia06/anat/{sub-tokyoIngenia06_T2w_labels-disc-manual.nii.gz => sub-tokyoIngenia06_space-other_T2w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-tokyoIngenia06/anat/{sub-tokyoIngenia06_flip-1_mt-on_MTS_seg-manual.json => sub-tokyoIngenia06_space-other_T2w_seg-manual.json} (100%) rename derivatives/labels/sub-tokyoIngenia06/anat/{sub-tokyoIngenia06_T2w_seg-manual.nii.gz => sub-tokyoIngenia06_space-other_T2w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-tokyoIngenia07/anat/{sub-tokyoIngenia07_T2star_seg-manual.json => sub-tokyoIngenia07_flip-1_mt-on_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-tokyoIngenia07/anat/{sub-tokyoIngenia07_flip-1_mt-on_MTS_seg-manual.nii.gz => sub-tokyoIngenia07_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-tokyoIngenia07/anat/{sub-tokyoIngenia07_flip-2_mt-off_MTS_seg-manual.json => sub-tokyoIngenia07_flip-2_mt-off_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-tokyoIngenia07/anat/{sub-tokyoIngenia07_flip-2_mt-off_MTS_seg-manual.nii.gz => sub-tokyoIngenia07_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-tokyoIngenia07/anat/{sub-tokyoIngenia07_T1w_labels-disc-manual.json => sub-tokyoIngenia07_space-other_T1w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-tokyoIngenia07/anat/{sub-tokyoIngenia07_T1w_labels-disc-manual.nii.gz => sub-tokyoIngenia07_space-other_T1w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-tokyoIngenia07/anat/{sub-tokyoIngenia07_T1w_seg-manual.json => sub-tokyoIngenia07_space-other_T1w_seg-manual.json} (100%) rename derivatives/labels/sub-tokyoIngenia07/anat/{sub-tokyoIngenia07_T1w_seg-manual.nii.gz => sub-tokyoIngenia07_space-other_T1w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-tokyoIngenia07/anat/{sub-tokyoIngenia07_T2w_seg-manual.json => sub-tokyoIngenia07_space-other_T2star_seg-manual.json} (100%) rename derivatives/labels/sub-tokyoIngenia07/anat/{sub-tokyoIngenia07_T2star_seg-manual.nii.gz => sub-tokyoIngenia07_space-other_T2star_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-tokyoIngenia07/anat/{sub-tokyoIngenia07_T2w_labels-disc-manual.json => sub-tokyoIngenia07_space-other_T2w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-tokyoIngenia07/anat/{sub-tokyoIngenia07_T2w_labels-disc-manual.nii.gz => sub-tokyoIngenia07_space-other_T2w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-tokyoIngenia07/anat/{sub-tokyoIngenia07_flip-1_mt-on_MTS_seg-manual.json => sub-tokyoIngenia07_space-other_T2w_seg-manual.json} (100%) rename derivatives/labels/sub-tokyoIngenia07/anat/{sub-tokyoIngenia07_T2w_seg-manual.nii.gz => sub-tokyoIngenia07_space-other_T2w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-tokyoSkyra01/anat/{sub-tokyoSkyra01_T2star_seg-manual.json => sub-tokyoSkyra01_flip-1_mt-on_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-tokyoSkyra01/anat/{sub-tokyoSkyra01_flip-1_mt-on_MTS_seg-manual.nii.gz => sub-tokyoSkyra01_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-tokyoSkyra01/anat/{sub-tokyoSkyra01_flip-2_mt-off_MTS_seg-manual.json => sub-tokyoSkyra01_flip-2_mt-off_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-tokyoSkyra01/anat/{sub-tokyoSkyra01_flip-2_mt-off_MTS_seg-manual.nii.gz => sub-tokyoSkyra01_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-tokyoSkyra01/anat/{sub-tokyoSkyra01_T1w_labels-disc-manual.json => sub-tokyoSkyra01_space-other_T1w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-tokyoSkyra01/anat/{sub-tokyoSkyra01_T1w_labels-disc-manual.nii.gz => sub-tokyoSkyra01_space-other_T1w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-tokyoSkyra01/anat/{sub-tokyoSkyra01_T1w_seg-manual.json => sub-tokyoSkyra01_space-other_T1w_seg-manual.json} (100%) rename derivatives/labels/sub-tokyoSkyra01/anat/{sub-tokyoSkyra01_T1w_seg-manual.nii.gz => sub-tokyoSkyra01_space-other_T1w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-tokyoSkyra01/anat/{sub-tokyoSkyra01_flip-1_mt-on_MTS_seg-manual.json => sub-tokyoSkyra01_space-other_T2star_seg-manual.json} (100%) rename derivatives/labels/sub-tokyoSkyra01/anat/{sub-tokyoSkyra01_T2star_seg-manual.nii.gz => sub-tokyoSkyra01_space-other_T2star_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-tokyoSkyra01/anat/{sub-tokyoSkyra01_T2w_labels-disc-manual.json => sub-tokyoSkyra01_space-other_T2w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-tokyoSkyra01/anat/{sub-tokyoSkyra01_T2w_labels-disc-manual.nii.gz => sub-tokyoSkyra01_space-other_T2w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-tokyoSkyra01/anat/{sub-tokyoSkyra01_T2w_seg-manual.json => sub-tokyoSkyra01_space-other_T2w_seg-manual.json} (100%) rename derivatives/labels/sub-tokyoSkyra01/anat/{sub-tokyoSkyra01_T2w_seg-manual.nii.gz => sub-tokyoSkyra01_space-other_T2w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-tokyoSkyra02/anat/{sub-tokyoSkyra02_T2star_seg-manual.json => sub-tokyoSkyra02_flip-1_mt-on_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-tokyoSkyra02/anat/{sub-tokyoSkyra02_flip-1_mt-on_MTS_seg-manual.nii.gz => sub-tokyoSkyra02_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-tokyoSkyra02/anat/{sub-tokyoSkyra02_flip-1_mt-on_MTS_seg-manual.json => sub-tokyoSkyra02_flip-2_mt-off_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-tokyoSkyra02/anat/{sub-tokyoSkyra02_flip-2_mt-off_MTS_seg-manual.nii.gz => sub-tokyoSkyra02_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-tokyoSkyra02/anat/{sub-tokyoSkyra02_T1w_labels-disc-manual.json => sub-tokyoSkyra02_space-other_T1w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-tokyoSkyra02/anat/{sub-tokyoSkyra02_T1w_labels-disc-manual.nii.gz => sub-tokyoSkyra02_space-other_T1w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-tokyoSkyra02/anat/{sub-tokyoSkyra02_T1w_seg-manual.json => sub-tokyoSkyra02_space-other_T1w_seg-manual.json} (100%) rename derivatives/labels/sub-tokyoSkyra02/anat/{sub-tokyoSkyra02_T1w_seg-manual.nii.gz => sub-tokyoSkyra02_space-other_T1w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-tokyoSkyra02/anat/{sub-tokyoSkyra02_flip-2_mt-off_MTS_seg-manual.json => sub-tokyoSkyra02_space-other_T2star_seg-manual.json} (100%) rename derivatives/labels/sub-tokyoSkyra02/anat/{sub-tokyoSkyra02_T2star_seg-manual.nii.gz => sub-tokyoSkyra02_space-other_T2star_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-tokyoSkyra02/anat/{sub-tokyoSkyra02_T2w_labels-disc-manual.json => sub-tokyoSkyra02_space-other_T2w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-tokyoSkyra02/anat/{sub-tokyoSkyra02_T2w_labels-disc-manual.nii.gz => sub-tokyoSkyra02_space-other_T2w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-tokyoSkyra02/anat/{sub-tokyoSkyra02_T2w_seg-manual.json => sub-tokyoSkyra02_space-other_T2w_seg-manual.json} (100%) rename derivatives/labels/sub-tokyoSkyra02/anat/{sub-tokyoSkyra02_T2w_seg-manual.nii.gz => sub-tokyoSkyra02_space-other_T2w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-tokyoSkyra03/anat/{sub-tokyoSkyra03_T2star_seg-manual.json => sub-tokyoSkyra03_flip-1_mt-on_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-tokyoSkyra03/anat/{sub-tokyoSkyra03_flip-1_mt-on_MTS_seg-manual.nii.gz => sub-tokyoSkyra03_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-tokyoSkyra03/anat/{sub-tokyoSkyra03_flip-2_mt-off_MTS_seg-manual.json => sub-tokyoSkyra03_flip-2_mt-off_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-tokyoSkyra03/anat/{sub-tokyoSkyra03_flip-2_mt-off_MTS_seg-manual.nii.gz => sub-tokyoSkyra03_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-tokyoSkyra03/anat/{sub-tokyoSkyra03_T1w_RPI_r_labels-manual.nii.gz => sub-tokyoSkyra03_space-other_T1w_RPI_r_labels-manual.nii.gz} (100%) rename derivatives/labels/sub-tokyoSkyra03/anat/{sub-tokyoSkyra03_T1w_labels-disc-manual.json => sub-tokyoSkyra03_space-other_T1w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-tokyoSkyra03/anat/{sub-tokyoSkyra03_T1w_labels-disc-manual.nii.gz => sub-tokyoSkyra03_space-other_T1w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-tokyoSkyra03/anat/{sub-tokyoSkyra03_T1w_seg-manual.json => sub-tokyoSkyra03_space-other_T1w_seg-manual.json} (100%) rename derivatives/labels/sub-tokyoSkyra03/anat/{sub-tokyoSkyra03_T1w_seg-manual.nii.gz => sub-tokyoSkyra03_space-other_T1w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-tokyoSkyra03/anat/{sub-tokyoSkyra03_T2star_gmseg-manual.json => sub-tokyoSkyra03_space-other_T2star_gmseg-manual.json} (100%) rename derivatives/labels/sub-tokyoSkyra03/anat/{sub-tokyoSkyra03_T2star_gmseg-manual.nii.gz => sub-tokyoSkyra03_space-other_T2star_gmseg-manual.nii.gz} (100%) rename derivatives/labels/sub-tokyoSkyra03/anat/{sub-tokyoSkyra03_T2w_seg-manual.json => sub-tokyoSkyra03_space-other_T2star_seg-manual.json} (100%) rename derivatives/labels/sub-tokyoSkyra03/anat/{sub-tokyoSkyra03_T2star_seg-manual.nii.gz => sub-tokyoSkyra03_space-other_T2star_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-tokyoSkyra03/anat/{sub-tokyoSkyra03_T2w_labels-disc-manual.json => sub-tokyoSkyra03_space-other_T2w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-tokyoSkyra03/anat/{sub-tokyoSkyra03_T2w_labels-disc-manual.nii.gz => sub-tokyoSkyra03_space-other_T2w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-tokyoSkyra03/anat/{sub-tokyoSkyra03_flip-1_mt-on_MTS_seg-manual.json => sub-tokyoSkyra03_space-other_T2w_seg-manual.json} (100%) rename derivatives/labels/sub-tokyoSkyra03/anat/{sub-tokyoSkyra03_T2w_seg-manual.nii.gz => sub-tokyoSkyra03_space-other_T2w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-tokyoSkyra04/anat/{sub-tokyoSkyra04_T2star_seg-manual.json => sub-tokyoSkyra04_flip-1_mt-on_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-tokyoSkyra04/anat/{sub-tokyoSkyra04_flip-1_mt-on_MTS_seg-manual.nii.gz => sub-tokyoSkyra04_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-tokyoSkyra04/anat/{sub-tokyoSkyra04_flip-2_mt-off_MTS_seg-manual.json => sub-tokyoSkyra04_flip-2_mt-off_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-tokyoSkyra04/anat/{sub-tokyoSkyra04_flip-2_mt-off_MTS_seg-manual.nii.gz => sub-tokyoSkyra04_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-tokyoSkyra04/anat/{sub-tokyoSkyra04_T1w_labels-disc-manual.json => sub-tokyoSkyra04_space-other_T1w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-tokyoSkyra04/anat/{sub-tokyoSkyra04_T1w_labels-disc-manual.nii.gz => sub-tokyoSkyra04_space-other_T1w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-tokyoSkyra04/anat/{sub-tokyoSkyra04_T1w_seg-manual.json => sub-tokyoSkyra04_space-other_T1w_seg-manual.json} (100%) rename derivatives/labels/sub-tokyoSkyra04/anat/{sub-tokyoSkyra04_T1w_seg-manual.nii.gz => sub-tokyoSkyra04_space-other_T1w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-tokyoSkyra04/anat/{sub-tokyoSkyra04_T2star_gmseg-manual.json => sub-tokyoSkyra04_space-other_T2star_gmseg-manual.json} (100%) rename derivatives/labels/sub-tokyoSkyra04/anat/{sub-tokyoSkyra04_T2star_gmseg-manual.nii.gz => sub-tokyoSkyra04_space-other_T2star_gmseg-manual.nii.gz} (100%) rename derivatives/labels/sub-tokyoSkyra04/anat/{sub-tokyoSkyra04_T2w_seg-manual.json => sub-tokyoSkyra04_space-other_T2star_seg-manual.json} (100%) rename derivatives/labels/sub-tokyoSkyra04/anat/{sub-tokyoSkyra04_T2star_seg-manual.nii.gz => sub-tokyoSkyra04_space-other_T2star_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-tokyoSkyra04/anat/{sub-tokyoSkyra04_T2w_labels-disc-manual.json => sub-tokyoSkyra04_space-other_T2w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-tokyoSkyra04/anat/{sub-tokyoSkyra04_T2w_labels-disc-manual.nii.gz => sub-tokyoSkyra04_space-other_T2w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-tokyoSkyra04/anat/{sub-tokyoSkyra04_flip-1_mt-on_MTS_seg-manual.json => sub-tokyoSkyra04_space-other_T2w_seg-manual.json} (100%) rename derivatives/labels/sub-tokyoSkyra04/anat/{sub-tokyoSkyra04_T2w_seg-manual.nii.gz => sub-tokyoSkyra04_space-other_T2w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-tokyoSkyra05/anat/{sub-tokyoSkyra05_T2star_seg-manual.json => sub-tokyoSkyra05_flip-1_mt-on_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-tokyoSkyra05/anat/{sub-tokyoSkyra05_flip-1_mt-on_MTS_seg-manual.nii.gz => sub-tokyoSkyra05_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-tokyoSkyra05/anat/{sub-tokyoSkyra05_flip-2_mt-off_MTS_seg-manual.json => sub-tokyoSkyra05_flip-2_mt-off_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-tokyoSkyra05/anat/{sub-tokyoSkyra05_flip-2_mt-off_MTS_seg-manual.nii.gz => sub-tokyoSkyra05_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-tokyoSkyra05/anat/{sub-tokyoSkyra05_T1w_labels-disc-manual.json => sub-tokyoSkyra05_space-other_T1w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-tokyoSkyra05/anat/{sub-tokyoSkyra05_T1w_labels-disc-manual.nii.gz => sub-tokyoSkyra05_space-other_T1w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-tokyoSkyra05/anat/{sub-tokyoSkyra05_T1w_seg-manual.json => sub-tokyoSkyra05_space-other_T1w_seg-manual.json} (100%) rename derivatives/labels/sub-tokyoSkyra05/anat/{sub-tokyoSkyra05_T1w_seg-manual.nii.gz => sub-tokyoSkyra05_space-other_T1w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-tokyoSkyra05/anat/{sub-tokyoSkyra05_flip-1_mt-on_MTS_seg-manual.json => sub-tokyoSkyra05_space-other_T2star_seg-manual.json} (100%) rename derivatives/labels/sub-tokyoSkyra05/anat/{sub-tokyoSkyra05_T2star_seg-manual.nii.gz => sub-tokyoSkyra05_space-other_T2star_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-tokyoSkyra05/anat/{sub-tokyoSkyra05_T2w_labels-disc-manual.json => sub-tokyoSkyra05_space-other_T2w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-tokyoSkyra05/anat/{sub-tokyoSkyra05_T2w_labels-disc-manual.nii.gz => sub-tokyoSkyra05_space-other_T2w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-tokyoSkyra05/anat/{sub-tokyoSkyra05_T2w_seg-manual.json => sub-tokyoSkyra05_space-other_T2w_seg-manual.json} (100%) rename derivatives/labels/sub-tokyoSkyra05/anat/{sub-tokyoSkyra05_T2w_seg-manual.nii.gz => sub-tokyoSkyra05_space-other_T2w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-tokyoSkyra06/anat/{sub-tokyoSkyra06_flip-1_mt-on_MTS_seg-manual.json => sub-tokyoSkyra06_flip-1_mt-on_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-tokyoSkyra06/anat/{sub-tokyoSkyra06_flip-1_mt-on_MTS_seg-manual.nii.gz => sub-tokyoSkyra06_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-tokyoSkyra06/anat/{sub-tokyoSkyra06_flip-2_mt-off_MTS_seg-manual.json => sub-tokyoSkyra06_flip-2_mt-off_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-tokyoSkyra06/anat/{sub-tokyoSkyra06_flip-2_mt-off_MTS_seg-manual.nii.gz => sub-tokyoSkyra06_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-tokyoSkyra06/anat/{sub-tokyoSkyra06_T1w_labels-disc-manual.json => sub-tokyoSkyra06_space-other_T1w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-tokyoSkyra06/anat/{sub-tokyoSkyra06_T1w_labels-disc-manual.nii.gz => sub-tokyoSkyra06_space-other_T1w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-tokyoSkyra06/anat/{sub-tokyoSkyra06_T1w_seg-manual.json => sub-tokyoSkyra06_space-other_T1w_seg-manual.json} (100%) rename derivatives/labels/sub-tokyoSkyra06/anat/{sub-tokyoSkyra06_T1w_seg-manual.nii.gz => sub-tokyoSkyra06_space-other_T1w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-tokyoSkyra06/anat/{sub-tokyoSkyra06_T2star_seg-manual.json => sub-tokyoSkyra06_space-other_T2star_seg-manual.json} (100%) rename derivatives/labels/sub-tokyoSkyra06/anat/{sub-tokyoSkyra06_T2star_seg-manual.nii.gz => sub-tokyoSkyra06_space-other_T2star_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-tokyoSkyra06/anat/{sub-tokyoSkyra06_T2w_labels-disc-manual.json => sub-tokyoSkyra06_space-other_T2w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-tokyoSkyra06/anat/{sub-tokyoSkyra06_T2w_labels-disc-manual.nii.gz => sub-tokyoSkyra06_space-other_T2w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-tokyoSkyra06/anat/{sub-tokyoSkyra06_T2w_seg-manual.json => sub-tokyoSkyra06_space-other_T2w_seg-manual.json} (100%) rename derivatives/labels/sub-tokyoSkyra06/anat/{sub-tokyoSkyra06_T2w_seg-manual.nii.gz => sub-tokyoSkyra06_space-other_T2w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-tokyoSkyra07/anat/{sub-tokyoSkyra07_flip-1_mt-on_MTS_seg-manual.json => sub-tokyoSkyra07_flip-1_mt-on_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-tokyoSkyra07/anat/{sub-tokyoSkyra07_flip-1_mt-on_MTS_seg-manual.nii.gz => sub-tokyoSkyra07_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-tokyoSkyra07/anat/{sub-tokyoSkyra07_flip-2_mt-off_MTS_seg-manual.json => sub-tokyoSkyra07_flip-2_mt-off_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-tokyoSkyra07/anat/{sub-tokyoSkyra07_flip-2_mt-off_MTS_seg-manual.nii.gz => sub-tokyoSkyra07_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-tokyoSkyra07/anat/{sub-tokyoSkyra07_T1w_labels-disc-manual.json => sub-tokyoSkyra07_space-other_T1w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-tokyoSkyra07/anat/{sub-tokyoSkyra07_T1w_labels-disc-manual.nii.gz => sub-tokyoSkyra07_space-other_T1w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-tokyoSkyra07/anat/{sub-tokyoSkyra07_T1w_seg-manual.json => sub-tokyoSkyra07_space-other_T1w_seg-manual.json} (100%) rename derivatives/labels/sub-tokyoSkyra07/anat/{sub-tokyoSkyra07_T1w_seg-manual.nii.gz => sub-tokyoSkyra07_space-other_T1w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-tokyoSkyra07/anat/{sub-tokyoSkyra07_T2star_seg-manual.json => sub-tokyoSkyra07_space-other_T2star_seg-manual.json} (100%) rename derivatives/labels/sub-tokyoSkyra07/anat/{sub-tokyoSkyra07_T2star_seg-manual.nii.gz => sub-tokyoSkyra07_space-other_T2star_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-tokyoSkyra07/anat/{sub-tokyoSkyra07_T2w_labels-disc-manual.json => sub-tokyoSkyra07_space-other_T2w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-tokyoSkyra07/anat/{sub-tokyoSkyra07_T2w_labels-disc-manual.nii.gz => sub-tokyoSkyra07_space-other_T2w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-tokyoSkyra07/anat/{sub-tokyoSkyra07_T2w_seg-manual.json => sub-tokyoSkyra07_space-other_T2w_seg-manual.json} (100%) rename derivatives/labels/sub-tokyoSkyra07/anat/{sub-tokyoSkyra07_T2w_seg-manual.nii.gz => sub-tokyoSkyra07_space-other_T2w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-ubc01/anat/{sub-ubc01_T2star_seg-manual.json => sub-ubc01_flip-1_mt-on_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-ubc01/anat/{sub-ubc01_flip-1_mt-on_MTS_seg-manual.nii.gz => sub-ubc01_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-ubc01/anat/{sub-ubc01_T1w_labels-disc-manual.json => sub-ubc01_space-other_T1w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-ubc01/anat/{sub-ubc01_T1w_labels-disc-manual.nii.gz => sub-ubc01_space-other_T1w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-ubc01/anat/{sub-ubc01_T1w_seg-manual.json => sub-ubc01_space-other_T1w_seg-manual.json} (100%) rename derivatives/labels/sub-ubc01/anat/{sub-ubc01_T1w_seg-manual.nii.gz => sub-ubc01_space-other_T1w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-ubc01/anat/{sub-ubc01_T2w_seg-manual.json => sub-ubc01_space-other_T2star_seg-manual.json} (100%) rename derivatives/labels/sub-ubc01/anat/{sub-ubc01_T2star_seg-manual.nii.gz => sub-ubc01_space-other_T2star_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-ubc01/anat/{sub-ubc01_T2w_labels-disc-manual.json => sub-ubc01_space-other_T2w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-ubc01/anat/{sub-ubc01_T2w_labels-disc-manual.nii.gz => sub-ubc01_space-other_T2w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-ubc01/anat/{sub-ubc01_flip-1_mt-on_MTS_seg-manual.json => sub-ubc01_space-other_T2w_seg-manual.json} (100%) rename derivatives/labels/sub-ubc01/anat/{sub-ubc01_T2w_seg-manual.nii.gz => sub-ubc01_space-other_T2w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-ubc02/anat/{sub-ubc02_flip-1_mt-on_MTS_seg-manual.json => sub-ubc02_flip-1_mt-on_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-ubc02/anat/{sub-ubc02_flip-1_mt-on_MTS_seg-manual.nii.gz => sub-ubc02_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-ubc02/anat/{sub-ubc02_T2star_seg-manual.json => sub-ubc02_flip-2_mt-off_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-ubc02/anat/{sub-ubc02_flip-2_mt-off_MTS_seg-manual.nii.gz => sub-ubc02_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-ubc02/anat/{sub-ubc02_T1w_labels-disc-manual.json => sub-ubc02_space-other_T1w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-ubc02/anat/{sub-ubc02_T1w_labels-disc-manual.nii.gz => sub-ubc02_space-other_T1w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-ubc02/anat/{sub-ubc02_T1w_seg-manual.json => sub-ubc02_space-other_T1w_seg-manual.json} (100%) rename derivatives/labels/sub-ubc02/anat/{sub-ubc02_T1w_seg-manual.nii.gz => sub-ubc02_space-other_T1w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-ubc02/anat/{sub-ubc02_flip-2_mt-off_MTS_seg-manual.json => sub-ubc02_space-other_T2star_seg-manual.json} (100%) rename derivatives/labels/sub-ubc02/anat/{sub-ubc02_T2star_seg-manual.nii.gz => sub-ubc02_space-other_T2star_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-ubc02/anat/{sub-ubc02_T2w_labels-disc-manual.json => sub-ubc02_space-other_T2w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-ubc02/anat/{sub-ubc02_T2w_labels-disc-manual.nii.gz => sub-ubc02_space-other_T2w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-ubc02/anat/{sub-ubc02_T2w_seg-manual.json => sub-ubc02_space-other_T2w_seg-manual.json} (100%) rename derivatives/labels/sub-ubc02/anat/{sub-ubc02_T2w_seg-manual.nii.gz => sub-ubc02_space-other_T2w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-ubc03/anat/{sub-ubc03_T2star_seg-manual.json => sub-ubc03_flip-1_mt-on_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-ubc03/anat/{sub-ubc03_flip-1_mt-on_MTS_seg-manual.nii.gz => sub-ubc03_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-ubc03/anat/{sub-ubc03_flip-1_mt-on_MTS_seg-manual.json => sub-ubc03_flip-2_mt-off_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-ubc03/anat/{sub-ubc03_flip-2_mt-off_MTS_seg-manual.nii.gz => sub-ubc03_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-ubc03/anat/{sub-ubc03_T1w_labels-disc-manual.json => sub-ubc03_space-other_T1w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-ubc03/anat/{sub-ubc03_T1w_labels-disc-manual.nii.gz => sub-ubc03_space-other_T1w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-ubc03/anat/{sub-ubc03_T1w_seg-manual.json => sub-ubc03_space-other_T1w_seg-manual.json} (100%) rename derivatives/labels/sub-ubc03/anat/{sub-ubc03_T1w_seg-manual.nii.gz => sub-ubc03_space-other_T1w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-ubc03/anat/{sub-ubc03_flip-2_mt-off_MTS_seg-manual.json => sub-ubc03_space-other_T2star_seg-manual.json} (100%) rename derivatives/labels/sub-ubc03/anat/{sub-ubc03_T2star_seg-manual.nii.gz => sub-ubc03_space-other_T2star_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-ubc03/anat/{sub-ubc03_T2w_labels-disc-manual.json => sub-ubc03_space-other_T2w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-ubc03/anat/{sub-ubc03_T2w_labels-disc-manual.nii.gz => sub-ubc03_space-other_T2w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-ubc03/anat/{sub-ubc03_T2w_seg-manual.json => sub-ubc03_space-other_T2w_seg-manual.json} (100%) rename derivatives/labels/sub-ubc03/anat/{sub-ubc03_T2w_seg-manual.nii.gz => sub-ubc03_space-other_T2w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-ubc04/anat/{sub-ubc04_flip-1_mt-on_MTS_seg-manual.json => sub-ubc04_flip-1_mt-on_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-ubc04/anat/{sub-ubc04_flip-1_mt-on_MTS_seg-manual.nii.gz => sub-ubc04_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-ubc04/anat/{sub-ubc04_T2star_seg-manual.json => sub-ubc04_flip-2_mt-off_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-ubc04/anat/{sub-ubc04_flip-2_mt-off_MTS_seg-manual.nii.gz => sub-ubc04_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-ubc04/anat/{sub-ubc04_T1w_labels-disc-manual.json => sub-ubc04_space-other_T1w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-ubc04/anat/{sub-ubc04_T1w_labels-disc-manual.nii.gz => sub-ubc04_space-other_T1w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-ubc04/anat/{sub-ubc04_T1w_seg-manual.json => sub-ubc04_space-other_T1w_seg-manual.json} (100%) rename derivatives/labels/sub-ubc04/anat/{sub-ubc04_T1w_seg-manual.nii.gz => sub-ubc04_space-other_T1w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-ubc04/anat/{sub-ubc04_flip-2_mt-off_MTS_seg-manual.json => sub-ubc04_space-other_T2star_seg-manual.json} (100%) rename derivatives/labels/sub-ubc04/anat/{sub-ubc04_T2star_seg-manual.nii.gz => sub-ubc04_space-other_T2star_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-ubc04/anat/{sub-ubc04_T2w_labels-disc-manual.json => sub-ubc04_space-other_T2w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-ubc04/anat/{sub-ubc04_T2w_labels-disc-manual.nii.gz => sub-ubc04_space-other_T2w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-ubc04/anat/{sub-ubc04_T2w_seg-manual.json => sub-ubc04_space-other_T2w_seg-manual.json} (100%) rename derivatives/labels/sub-ubc04/anat/{sub-ubc04_T2w_seg-manual.nii.gz => sub-ubc04_space-other_T2w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-ubc05/anat/{sub-ubc05_flip-1_mt-on_MTS_seg-manual.json => sub-ubc05_flip-1_mt-on_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-ubc05/anat/{sub-ubc05_flip-1_mt-on_MTS_seg-manual.nii.gz => sub-ubc05_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-ubc05/anat/{sub-ubc05_T2star_seg-manual.json => sub-ubc05_flip-2_mt-off_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-ubc05/anat/{sub-ubc05_flip-2_mt-off_MTS_seg-manual.nii.gz => sub-ubc05_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-ubc05/anat/{sub-ubc05_T1w_labels-disc-manual.json => sub-ubc05_space-other_T1w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-ubc05/anat/{sub-ubc05_T1w_labels-disc-manual.nii.gz => sub-ubc05_space-other_T1w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-ubc05/anat/{sub-ubc05_T1w_seg-manual.json => sub-ubc05_space-other_T1w_seg-manual.json} (100%) rename derivatives/labels/sub-ubc05/anat/{sub-ubc05_T1w_seg-manual.nii.gz => sub-ubc05_space-other_T1w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-ubc05/anat/{sub-ubc05_flip-2_mt-off_MTS_seg-manual.json => sub-ubc05_space-other_T2star_seg-manual.json} (100%) rename derivatives/labels/sub-ubc05/anat/{sub-ubc05_T2star_seg-manual.nii.gz => sub-ubc05_space-other_T2star_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-ubc05/anat/{sub-ubc05_T2w_labels-disc-manual.json => sub-ubc05_space-other_T2w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-ubc05/anat/{sub-ubc05_T2w_labels-disc-manual.nii.gz => sub-ubc05_space-other_T2w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-ubc05/anat/{sub-ubc05_T2w_seg-manual.json => sub-ubc05_space-other_T2w_seg-manual.json} (100%) rename derivatives/labels/sub-ubc05/anat/{sub-ubc05_T2w_seg-manual.nii.gz => sub-ubc05_space-other_T2w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-ubc06/anat/{sub-ubc06_T2star_seg-manual.json => sub-ubc06_flip-1_mt-on_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-ubc06/anat/{sub-ubc06_flip-1_mt-on_MTS_seg-manual.nii.gz => sub-ubc06_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-ubc06/anat/{sub-ubc06_flip-1_mt-on_MTS_seg-manual.json => sub-ubc06_flip-2_mt-off_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-ubc06/anat/{sub-ubc06_flip-2_mt-off_MTS_seg-manual.nii.gz => sub-ubc06_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-ubc06/anat/{sub-ubc06_T1w_labels-disc-manual.json => sub-ubc06_space-other_T1w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-ubc06/anat/{sub-ubc06_T1w_labels-disc-manual.nii.gz => sub-ubc06_space-other_T1w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-ubc06/anat/{sub-ubc06_T1w_seg-manual.json => sub-ubc06_space-other_T1w_seg-manual.json} (100%) rename derivatives/labels/sub-ubc06/anat/{sub-ubc06_T1w_seg-manual.nii.gz => sub-ubc06_space-other_T1w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-ubc06/anat/{sub-ubc06_flip-2_mt-off_MTS_seg-manual.json => sub-ubc06_space-other_T2star_seg-manual.json} (100%) rename derivatives/labels/sub-ubc06/anat/{sub-ubc06_T2star_seg-manual.nii.gz => sub-ubc06_space-other_T2star_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-ubc06/anat/{sub-ubc06_T2w_labels-disc-manual.json => sub-ubc06_space-other_T2w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-ubc06/anat/{sub-ubc06_T2w_labels-disc-manual.nii.gz => sub-ubc06_space-other_T2w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-ubc06/anat/{sub-ubc06_T2w_seg-manual.json => sub-ubc06_space-other_T2w_seg-manual.json} (100%) rename derivatives/labels/sub-ubc06/anat/{sub-ubc06_T2w_seg-manual.nii.gz => sub-ubc06_space-other_T2w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-ucdavis01/anat/{sub-ucdavis01_T2star_seg-manual.json => sub-ucdavis01_flip-1_mt-on_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-ucdavis01/anat/{sub-ucdavis01_flip-1_mt-on_MTS_seg-manual.nii.gz => sub-ucdavis01_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-ucdavis01/anat/{sub-ucdavis01_flip-1_mt-on_MTS_seg-manual.json => sub-ucdavis01_flip-2_mt-off_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-ucdavis01/anat/{sub-ucdavis01_flip-2_mt-off_MTS_seg-manual.nii.gz => sub-ucdavis01_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-ucdavis01/anat/{sub-ucdavis01_T1w_labels-disc-manual.json => sub-ucdavis01_space-other_T1w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-ucdavis01/anat/{sub-ucdavis01_T1w_labels-disc-manual.nii.gz => sub-ucdavis01_space-other_T1w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-ucdavis01/anat/{sub-ucdavis01_T1w_seg-manual.json => sub-ucdavis01_space-other_T1w_seg-manual.json} (100%) rename derivatives/labels/sub-ucdavis01/anat/{sub-ucdavis01_T1w_seg-manual.nii.gz => sub-ucdavis01_space-other_T1w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-ucdavis01/anat/{sub-ucdavis01_flip-2_mt-off_MTS_seg-manual.json => sub-ucdavis01_space-other_T2star_seg-manual.json} (100%) rename derivatives/labels/sub-ucdavis01/anat/{sub-ucdavis01_T2star_seg-manual.nii.gz => sub-ucdavis01_space-other_T2star_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-ucdavis01/anat/{sub-ucdavis01_T2w_labels-disc-manual.json => sub-ucdavis01_space-other_T2w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-ucdavis01/anat/{sub-ucdavis01_T2w_labels-disc-manual.nii.gz => sub-ucdavis01_space-other_T2w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-ucdavis01/anat/{sub-ucdavis01_T2w_seg-manual.json => sub-ucdavis01_space-other_T2w_seg-manual.json} (100%) rename derivatives/labels/sub-ucdavis01/anat/{sub-ucdavis01_T2w_seg-manual.nii.gz => sub-ucdavis01_space-other_T2w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-ucdavis02/anat/{sub-ucdavis02_flip-1_mt-on_MTS_seg-manual.json => sub-ucdavis02_flip-1_mt-on_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-ucdavis02/anat/{sub-ucdavis02_flip-1_mt-on_MTS_seg-manual.nii.gz => sub-ucdavis02_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-ucdavis02/anat/{sub-ucdavis02_flip-2_mt-off_MTS_seg-manual.json => sub-ucdavis02_flip-2_mt-off_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-ucdavis02/anat/{sub-ucdavis02_flip-2_mt-off_MTS_seg-manual.nii.gz => sub-ucdavis02_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-ucdavis02/anat/{sub-ucdavis02_T1w_labels-disc-manual.json => sub-ucdavis02_space-other_T1w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-ucdavis02/anat/{sub-ucdavis02_T1w_labels-disc-manual.nii.gz => sub-ucdavis02_space-other_T1w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-ucdavis02/anat/{sub-ucdavis02_T1w_seg-manual.json => sub-ucdavis02_space-other_T1w_seg-manual.json} (100%) rename derivatives/labels/sub-ucdavis02/anat/{sub-ucdavis02_T1w_seg-manual.nii.gz => sub-ucdavis02_space-other_T1w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-ucdavis02/anat/{sub-ucdavis02_T2star_seg-manual.json => sub-ucdavis02_space-other_T2star_seg-manual.json} (100%) rename derivatives/labels/sub-ucdavis02/anat/{sub-ucdavis02_T2star_seg-manual.nii.gz => sub-ucdavis02_space-other_T2star_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-ucdavis02/anat/{sub-ucdavis02_T2w_labels-disc-manual.json => sub-ucdavis02_space-other_T2w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-ucdavis02/anat/{sub-ucdavis02_T2w_labels-disc-manual.nii.gz => sub-ucdavis02_space-other_T2w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-ucdavis02/anat/{sub-ucdavis02_T2w_seg-manual.json => sub-ucdavis02_space-other_T2w_seg-manual.json} (100%) rename derivatives/labels/sub-ucdavis02/anat/{sub-ucdavis02_T2w_seg-manual.nii.gz => sub-ucdavis02_space-other_T2w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-ucdavis03/anat/{sub-ucdavis03_T2star_seg-manual.json => sub-ucdavis03_flip-1_mt-on_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-ucdavis03/anat/{sub-ucdavis03_flip-1_mt-on_MTS_seg-manual.nii.gz => sub-ucdavis03_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-ucdavis03/anat/{sub-ucdavis03_T1w_labels-disc-manual.json => sub-ucdavis03_space-other_T1w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-ucdavis03/anat/{sub-ucdavis03_T1w_labels-disc-manual.nii.gz => sub-ucdavis03_space-other_T1w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-ucdavis03/anat/{sub-ucdavis03_T1w_seg-manual.json => sub-ucdavis03_space-other_T1w_seg-manual.json} (100%) rename derivatives/labels/sub-ucdavis03/anat/{sub-ucdavis03_T1w_seg-manual.nii.gz => sub-ucdavis03_space-other_T1w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-ucdavis03/anat/{sub-ucdavis03_flip-1_mt-on_MTS_seg-manual.json => sub-ucdavis03_space-other_T2star_seg-manual.json} (100%) rename derivatives/labels/sub-ucdavis03/anat/{sub-ucdavis03_T2star_seg-manual.nii.gz => sub-ucdavis03_space-other_T2star_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-ucdavis03/anat/{sub-ucdavis03_T2w_labels-disc-manual.json => sub-ucdavis03_space-other_T2w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-ucdavis03/anat/{sub-ucdavis03_T2w_labels-disc-manual.nii.gz => sub-ucdavis03_space-other_T2w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-ucdavis03/anat/{sub-ucdavis03_T2w_seg-manual.json => sub-ucdavis03_space-other_T2w_seg-manual.json} (100%) rename derivatives/labels/sub-ucdavis03/anat/{sub-ucdavis03_T2w_seg-manual.nii.gz => sub-ucdavis03_space-other_T2w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-ucdavis04/anat/{sub-ucdavis04_T1w_seg-manual.json => sub-ucdavis04_flip-1_mt-on_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-ucdavis04/anat/{sub-ucdavis04_flip-1_mt-on_MTS_seg-manual.nii.gz => sub-ucdavis04_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-ucdavis04/anat/{sub-ucdavis04_flip-2_mt-off_MTS_seg-manual.json => sub-ucdavis04_flip-2_mt-off_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-ucdavis04/anat/{sub-ucdavis04_flip-2_mt-off_MTS_seg-manual.nii.gz => sub-ucdavis04_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-ucdavis04/anat/{sub-ucdavis04_T1w_labels-disc-manual.json => sub-ucdavis04_space-other_T1w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-ucdavis04/anat/{sub-ucdavis04_T1w_labels-disc-manual.nii.gz => sub-ucdavis04_space-other_T1w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-ucdavis04/anat/{sub-ucdavis04_T2star_seg-manual.json => sub-ucdavis04_space-other_T1w_seg-manual.json} (100%) rename derivatives/labels/sub-ucdavis04/anat/{sub-ucdavis04_T1w_seg-manual.nii.gz => sub-ucdavis04_space-other_T1w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-ucdavis04/anat/{sub-ucdavis04_flip-1_mt-on_MTS_seg-manual.json => sub-ucdavis04_space-other_T2star_seg-manual.json} (100%) rename derivatives/labels/sub-ucdavis04/anat/{sub-ucdavis04_T2star_seg-manual.nii.gz => sub-ucdavis04_space-other_T2star_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-ucdavis04/anat/{sub-ucdavis04_T2w_labels-disc-manual.json => sub-ucdavis04_space-other_T2w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-ucdavis04/anat/{sub-ucdavis04_T2w_labels-disc-manual.nii.gz => sub-ucdavis04_space-other_T2w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-ucdavis04/anat/{sub-ucdavis04_T2w_seg-manual.json => sub-ucdavis04_space-other_T2w_seg-manual.json} (100%) rename derivatives/labels/sub-ucdavis04/anat/{sub-ucdavis04_T2w_seg-manual.nii.gz => sub-ucdavis04_space-other_T2w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-ucdavis05/anat/{sub-ucdavis05_T2star_seg-manual.json => sub-ucdavis05_flip-1_mt-on_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-ucdavis05/anat/{sub-ucdavis05_flip-1_mt-on_MTS_seg-manual.nii.gz => sub-ucdavis05_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-ucdavis05/anat/{sub-ucdavis05_T1w_labels-disc-manual.json => sub-ucdavis05_space-other_T1w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-ucdavis05/anat/{sub-ucdavis05_T1w_labels-disc-manual.nii.gz => sub-ucdavis05_space-other_T1w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-ucdavis05/anat/{sub-ucdavis05_T1w_seg-manual.json => sub-ucdavis05_space-other_T1w_seg-manual.json} (100%) rename derivatives/labels/sub-ucdavis05/anat/{sub-ucdavis05_T1w_seg-manual.nii.gz => sub-ucdavis05_space-other_T1w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-ucdavis05/anat/{sub-ucdavis05_T2w_seg-manual.json => sub-ucdavis05_space-other_T2star_seg-manual.json} (100%) rename derivatives/labels/sub-ucdavis05/anat/{sub-ucdavis05_T2star_seg-manual.nii.gz => sub-ucdavis05_space-other_T2star_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-ucdavis05/anat/{sub-ucdavis05_T2w_labels-disc-manual.json => sub-ucdavis05_space-other_T2w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-ucdavis05/anat/{sub-ucdavis05_T2w_labels-disc-manual.nii.gz => sub-ucdavis05_space-other_T2w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-ucdavis05/anat/{sub-ucdavis05_flip-1_mt-on_MTS_seg-manual.json => sub-ucdavis05_space-other_T2w_seg-manual.json} (100%) rename derivatives/labels/sub-ucdavis05/anat/{sub-ucdavis05_T2w_seg-manual.nii.gz => sub-ucdavis05_space-other_T2w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-ucdavis06/anat/{sub-ucdavis06_T2star_seg-manual.json => sub-ucdavis06_flip-1_mt-on_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-ucdavis06/anat/{sub-ucdavis06_flip-1_mt-on_MTS_seg-manual.nii.gz => sub-ucdavis06_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-ucdavis06/anat/{sub-ucdavis06_T1w_labels-disc-manual.json => sub-ucdavis06_space-other_T1w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-ucdavis06/anat/{sub-ucdavis06_T1w_labels-disc-manual.nii.gz => sub-ucdavis06_space-other_T1w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-ucdavis06/anat/{sub-ucdavis06_T1w_seg-manual.json => sub-ucdavis06_space-other_T1w_seg-manual.json} (100%) rename derivatives/labels/sub-ucdavis06/anat/{sub-ucdavis06_T1w_seg-manual.nii.gz => sub-ucdavis06_space-other_T1w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-ucdavis06/anat/{sub-ucdavis06_T2w_seg-manual.json => sub-ucdavis06_space-other_T2star_seg-manual.json} (100%) rename derivatives/labels/sub-ucdavis06/anat/{sub-ucdavis06_T2star_seg-manual.nii.gz => sub-ucdavis06_space-other_T2star_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-ucdavis06/anat/{sub-ucdavis06_T2w_labels-disc-manual.json => sub-ucdavis06_space-other_T2w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-ucdavis06/anat/{sub-ucdavis06_T2w_labels-disc-manual.nii.gz => sub-ucdavis06_space-other_T2w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-ucdavis06/anat/{sub-ucdavis06_flip-1_mt-on_MTS_seg-manual.json => sub-ucdavis06_space-other_T2w_seg-manual.json} (100%) rename derivatives/labels/sub-ucdavis06/anat/{sub-ucdavis06_T2w_seg-manual.nii.gz => sub-ucdavis06_space-other_T2w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-ucdavis07/anat/{sub-ucdavis07_T2star_seg-manual.json => sub-ucdavis07_flip-1_mt-on_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-ucdavis07/anat/{sub-ucdavis07_flip-1_mt-on_MTS_seg-manual.nii.gz => sub-ucdavis07_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-ucdavis07/anat/{sub-ucdavis07_T1w_labels-disc-manual.json => sub-ucdavis07_space-other_T1w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-ucdavis07/anat/{sub-ucdavis07_T1w_labels-disc-manual.nii.gz => sub-ucdavis07_space-other_T1w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-ucdavis07/anat/{sub-ucdavis07_T1w_seg-manual.json => sub-ucdavis07_space-other_T1w_seg-manual.json} (100%) rename derivatives/labels/sub-ucdavis07/anat/{sub-ucdavis07_T1w_seg-manual.nii.gz => sub-ucdavis07_space-other_T1w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-ucdavis07/anat/{sub-ucdavis07_flip-1_mt-on_MTS_seg-manual.json => sub-ucdavis07_space-other_T2star_seg-manual.json} (100%) rename derivatives/labels/sub-ucdavis07/anat/{sub-ucdavis07_T2star_seg-manual.nii.gz => sub-ucdavis07_space-other_T2star_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-ucdavis07/anat/{sub-ucdavis07_T2w_labels-disc-manual.json => sub-ucdavis07_space-other_T2w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-ucdavis07/anat/{sub-ucdavis07_T2w_labels-disc-manual.nii.gz => sub-ucdavis07_space-other_T2w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-ucdavis07/anat/{sub-ucdavis07_T2w_seg-manual.json => sub-ucdavis07_space-other_T2w_seg-manual.json} (100%) rename derivatives/labels/sub-ucdavis07/anat/{sub-ucdavis07_T2w_seg-manual.nii.gz => sub-ucdavis07_space-other_T2w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-ucl01/anat/{sub-ucl01_T2star_seg-manual.json => sub-ucl01_flip-1_mt-on_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-ucl01/anat/{sub-ucl01_flip-1_mt-on_MTS_seg-manual.nii.gz => sub-ucl01_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-ucl01/anat/{sub-ucl01_T2w_seg-manual.json => sub-ucl01_flip-2_mt-off_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-ucl01/anat/{sub-ucl01_flip-2_mt-off_MTS_seg-manual.nii.gz => sub-ucl01_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-ucl01/anat/{sub-ucl01_T1w_labels-disc-manual.json => sub-ucl01_space-other_T1w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-ucl01/anat/{sub-ucl01_T1w_labels-disc-manual.nii.gz => sub-ucl01_space-other_T1w_labels-disc-manual.nii.gz} (100%) rename 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derivatives/labels/sub-ucl01/anat/{sub-ucl01_T2w_seg-manual.nii.gz => sub-ucl01_space-other_T2w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-ucl02/anat/{sub-ucl02_T2star_seg-manual.json => sub-ucl02_flip-1_mt-on_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-ucl02/anat/{sub-ucl02_flip-1_mt-on_MTS_seg-manual.nii.gz => sub-ucl02_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-ucl02/anat/{sub-ucl02_T2w_seg-manual.json => sub-ucl02_flip-2_mt-off_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-ucl02/anat/{sub-ucl02_flip-2_mt-off_MTS_seg-manual.nii.gz => sub-ucl02_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-ucl02/anat/{sub-ucl02_T1w_labels-disc-manual.json => sub-ucl02_space-other_T1w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-ucl02/anat/{sub-ucl02_T1w_labels-disc-manual.nii.gz => sub-ucl02_space-other_T1w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-ucl02/anat/{sub-ucl02_T1w_seg-manual.json => sub-ucl02_space-other_T1w_seg-manual.json} (100%) rename derivatives/labels/sub-ucl02/anat/{sub-ucl02_T1w_seg-manual.nii.gz => sub-ucl02_space-other_T1w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-ucl02/anat/{sub-ucl02_flip-1_mt-on_MTS_seg-manual.json => sub-ucl02_space-other_T2star_seg-manual.json} (100%) rename derivatives/labels/sub-ucl02/anat/{sub-ucl02_T2star_seg-manual.nii.gz => sub-ucl02_space-other_T2star_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-ucl02/anat/{sub-ucl02_T2w_labels-disc-manual.json => sub-ucl02_space-other_T2w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-ucl02/anat/{sub-ucl02_T2w_labels-disc-manual.nii.gz => sub-ucl02_space-other_T2w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-ucl02/anat/{sub-ucl02_flip-2_mt-off_MTS_seg-manual.json => sub-ucl02_space-other_T2w_seg-manual.json} (100%) rename derivatives/labels/sub-ucl02/anat/{sub-ucl02_T2w_seg-manual.nii.gz => sub-ucl02_space-other_T2w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-ucl03/anat/{sub-ucl03_T2star_seg-manual.json => sub-ucl03_flip-1_mt-on_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-ucl03/anat/{sub-ucl03_flip-1_mt-on_MTS_seg-manual.nii.gz => sub-ucl03_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-ucl03/anat/{sub-ucl03_flip-1_mt-on_MTS_seg-manual.json => sub-ucl03_flip-2_mt-off_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-ucl03/anat/{sub-ucl03_flip-2_mt-off_MTS_seg-manual.nii.gz => sub-ucl03_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-ucl03/anat/{sub-ucl03_T1w_labels-disc-manual.json => sub-ucl03_space-other_T1w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-ucl03/anat/{sub-ucl03_T1w_labels-disc-manual.nii.gz => sub-ucl03_space-other_T1w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-ucl03/anat/{sub-ucl03_T1w_seg-manual.json => sub-ucl03_space-other_T1w_seg-manual.json} (100%) rename derivatives/labels/sub-ucl03/anat/{sub-ucl03_T1w_seg-manual.nii.gz => sub-ucl03_space-other_T1w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-ucl03/anat/{sub-ucl03_flip-2_mt-off_MTS_seg-manual.json => sub-ucl03_space-other_T2star_seg-manual.json} (100%) rename derivatives/labels/sub-ucl03/anat/{sub-ucl03_T2star_seg-manual.nii.gz => sub-ucl03_space-other_T2star_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-ucl03/anat/{sub-ucl03_T2w_labels-disc-manual.json => sub-ucl03_space-other_T2w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-ucl03/anat/{sub-ucl03_T2w_labels-disc-manual.nii.gz => sub-ucl03_space-other_T2w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-ucl03/anat/{sub-ucl03_T2w_seg-manual.json => sub-ucl03_space-other_T2w_seg-manual.json} (100%) rename derivatives/labels/sub-ucl03/anat/{sub-ucl03_T2w_seg-manual.nii.gz => sub-ucl03_space-other_T2w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-ucl04/anat/{sub-ucl04_flip-1_mt-on_MTS_seg-manual.json => sub-ucl04_flip-1_mt-on_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-ucl04/anat/{sub-ucl04_flip-1_mt-on_MTS_seg-manual.nii.gz => sub-ucl04_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-ucl04/anat/{sub-ucl04_T2star_seg-manual.json => sub-ucl04_flip-2_mt-off_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-ucl04/anat/{sub-ucl04_flip-2_mt-off_MTS_seg-manual.nii.gz => sub-ucl04_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-ucl04/anat/{sub-ucl04_T1w_labels-disc-manual.json => sub-ucl04_space-other_T1w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-ucl04/anat/{sub-ucl04_T1w_labels-disc-manual.nii.gz => sub-ucl04_space-other_T1w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-ucl04/anat/{sub-ucl04_T1w_seg-manual.json => sub-ucl04_space-other_T1w_seg-manual.json} (100%) rename derivatives/labels/sub-ucl04/anat/{sub-ucl04_T1w_seg-manual.nii.gz => sub-ucl04_space-other_T1w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-ucl04/anat/{sub-ucl04_flip-2_mt-off_MTS_seg-manual.json => sub-ucl04_space-other_T2star_seg-manual.json} (100%) rename derivatives/labels/sub-ucl04/anat/{sub-ucl04_T2star_seg-manual.nii.gz => sub-ucl04_space-other_T2star_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-ucl04/anat/{sub-ucl04_T2w_labels-disc-manual.json => sub-ucl04_space-other_T2w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-ucl04/anat/{sub-ucl04_T2w_labels-disc-manual.nii.gz => sub-ucl04_space-other_T2w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-ucl04/anat/{sub-ucl04_T2w_seg-manual.json => sub-ucl04_space-other_T2w_seg-manual.json} 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sub-ucl05_space-other_T1w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-ucl05/anat/{sub-ucl05_T1w_seg-manual.json => sub-ucl05_space-other_T1w_seg-manual.json} (100%) rename derivatives/labels/sub-ucl05/anat/{sub-ucl05_T1w_seg-manual.nii.gz => sub-ucl05_space-other_T1w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-ucl05/anat/{sub-ucl05_flip-2_mt-off_MTS_seg-manual.json => sub-ucl05_space-other_T2star_seg-manual.json} (100%) rename derivatives/labels/sub-ucl05/anat/{sub-ucl05_T2star_seg-manual.nii.gz => sub-ucl05_space-other_T2star_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-ucl05/anat/{sub-ucl05_T2w_labels-disc-manual.json => sub-ucl05_space-other_T2w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-ucl05/anat/{sub-ucl05_T2w_labels-disc-manual.nii.gz => sub-ucl05_space-other_T2w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-ucl05/anat/{sub-ucl05_T2w_seg-manual.json => sub-ucl05_space-other_T2w_seg-manual.json} 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sub-ucl06_space-other_T1w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-ucl06/anat/{sub-ucl06_T1w_seg-manual.json => sub-ucl06_space-other_T1w_seg-manual.json} (100%) rename derivatives/labels/sub-ucl06/anat/{sub-ucl06_T1w_seg-manual.nii.gz => sub-ucl06_space-other_T1w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-ucl06/anat/{sub-ucl06_flip-2_mt-off_MTS_seg-manual.json => sub-ucl06_space-other_T2star_seg-manual.json} (100%) rename derivatives/labels/sub-ucl06/anat/{sub-ucl06_T2star_seg-manual.nii.gz => sub-ucl06_space-other_T2star_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-ucl06/anat/{sub-ucl06_T2w_labels-disc-manual.json => sub-ucl06_space-other_T2w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-ucl06/anat/{sub-ucl06_T2w_labels-disc-manual.nii.gz => sub-ucl06_space-other_T2w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-ucl06/anat/{sub-ucl06_T2w_seg-manual.json => sub-ucl06_space-other_T2w_seg-manual.json} 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sub-unf01_space-other_T1w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-unf01/anat/{sub-unf01_T1w_seg-manual.json => sub-unf01_space-other_T1w_seg-manual.json} (100%) rename derivatives/labels/sub-unf01/anat/{sub-unf01_T1w_seg-manual.nii.gz => sub-unf01_space-other_T1w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-unf01/anat/{sub-unf01_flip-1_mt-on_MTS_seg-manual.json => sub-unf01_space-other_T2star_seg-manual.json} (100%) rename derivatives/labels/sub-unf01/anat/{sub-unf01_T2star_seg-manual.nii.gz => sub-unf01_space-other_T2star_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-unf01/anat/{sub-unf01_T2w_labels-disc-manual.json => sub-unf01_space-other_T2w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-unf01/anat/{sub-unf01_T2w_labels-disc-manual.nii.gz => sub-unf01_space-other_T2w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-unf01/anat/{sub-unf01_T2w_seg-manual.json => sub-unf01_space-other_T2w_seg-manual.json} (100%) rename derivatives/labels/sub-unf01/anat/{sub-unf01_T2w_seg-manual.nii.gz => sub-unf01_space-other_T2w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-unf02/anat/{sub-unf02_T2star_seg-manual.json => sub-unf02_flip-1_mt-on_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-unf02/anat/{sub-unf02_flip-1_mt-on_MTS_seg-manual.nii.gz => sub-unf02_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-unf02/anat/{sub-unf02_flip-1_mt-on_MTS_seg-manual.json => sub-unf02_flip-2_mt-off_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-unf02/anat/{sub-unf02_flip-2_mt-off_MTS_seg-manual.nii.gz => sub-unf02_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-unf02/anat/{sub-unf02_T1w_labels-disc-manual.json => sub-unf02_space-other_T1w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-unf02/anat/{sub-unf02_T1w_labels-disc-manual.nii.gz => sub-unf02_space-other_T1w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-unf02/anat/{sub-unf02_T1w_seg-manual.json => sub-unf02_space-other_T1w_seg-manual.json} (100%) rename derivatives/labels/sub-unf02/anat/{sub-unf02_T1w_seg-manual.nii.gz => sub-unf02_space-other_T1w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-unf02/anat/{sub-unf02_flip-2_mt-off_MTS_seg-manual.json => sub-unf02_space-other_T2star_seg-manual.json} (100%) rename derivatives/labels/sub-unf02/anat/{sub-unf02_T2star_seg-manual.nii.gz => sub-unf02_space-other_T2star_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-unf02/anat/{sub-unf02_T2w_labels-disc-manual.json => sub-unf02_space-other_T2w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-unf02/anat/{sub-unf02_T2w_labels-disc-manual.nii.gz => sub-unf02_space-other_T2w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-unf02/anat/{sub-unf02_T2w_seg-manual.json => sub-unf02_space-other_T2w_seg-manual.json} 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sub-unf03_space-other_T1w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-unf03/anat/{sub-unf03_T1w_seg-manual.json => sub-unf03_space-other_T1w_seg-manual.json} (100%) rename derivatives/labels/sub-unf03/anat/{sub-unf03_T1w_seg-manual.nii.gz => sub-unf03_space-other_T1w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-unf03/anat/{sub-unf03_flip-1_mt-on_MTS_seg-manual.json => sub-unf03_space-other_T2star_seg-manual.json} (100%) rename derivatives/labels/sub-unf03/anat/{sub-unf03_T2star_seg-manual.nii.gz => sub-unf03_space-other_T2star_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-unf03/anat/{sub-unf03_T2w_labels-disc-manual.json => sub-unf03_space-other_T2w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-unf03/anat/{sub-unf03_T2w_labels-disc-manual.nii.gz => sub-unf03_space-other_T2w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-unf03/anat/{sub-unf03_T2w_seg-manual.json => sub-unf03_space-other_T2w_seg-manual.json} (100%) rename derivatives/labels/sub-unf03/anat/{sub-unf03_T2w_seg-manual.nii.gz => sub-unf03_space-other_T2w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-unf04/anat/{sub-unf04_flip-1_mt-on_MTS_seg-manual.json => sub-unf04_flip-1_mt-on_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-unf04/anat/{sub-unf04_flip-1_mt-on_MTS_seg-manual.nii.gz => sub-unf04_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-unf04/anat/{sub-unf04_T2w_seg-manual.json => sub-unf04_flip-2_mt-off_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-unf04/anat/{sub-unf04_flip-2_mt-off_MTS_seg-manual.nii.gz => sub-unf04_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-unf04/anat/{sub-unf04_T1w_labels-disc-manual.json => sub-unf04_space-other_T1w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-unf04/anat/{sub-unf04_T1w_labels-disc-manual.nii.gz => sub-unf04_space-other_T1w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-unf04/anat/{sub-unf04_T1w_seg-manual.json => sub-unf04_space-other_T1w_seg-manual.json} (100%) rename derivatives/labels/sub-unf04/anat/{sub-unf04_T1w_seg-manual.nii.gz => sub-unf04_space-other_T1w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-unf04/anat/{sub-unf04_T2star_seg-manual.json => sub-unf04_space-other_T2star_seg-manual.json} (100%) rename derivatives/labels/sub-unf04/anat/{sub-unf04_T2star_seg-manual.nii.gz => sub-unf04_space-other_T2star_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-unf04/anat/{sub-unf04_T2w_labels-disc-manual.json => sub-unf04_space-other_T2w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-unf04/anat/{sub-unf04_T2w_labels-disc-manual.nii.gz => sub-unf04_space-other_T2w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-unf04/anat/{sub-unf04_flip-2_mt-off_MTS_seg-manual.json => sub-unf04_space-other_T2w_seg-manual.json} 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sub-unf05_space-other_T1w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-unf05/anat/{sub-unf05_T1w_seg-manual.json => sub-unf05_space-other_T1w_seg-manual.json} (100%) rename derivatives/labels/sub-unf05/anat/{sub-unf05_T1w_seg-manual.nii.gz => sub-unf05_space-other_T1w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-unf05/anat/{sub-unf05_T2w_seg-manual.json => sub-unf05_space-other_T2star_seg-manual.json} (100%) rename derivatives/labels/sub-unf05/anat/{sub-unf05_T2star_seg-manual.nii.gz => sub-unf05_space-other_T2star_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-unf05/anat/{sub-unf05_T2w_labels-disc-manual.json => sub-unf05_space-other_T2w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-unf05/anat/{sub-unf05_T2w_labels-disc-manual.nii.gz => sub-unf05_space-other_T2w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-unf05/anat/{sub-unf05_flip-1_mt-on_MTS_seg-manual.json => sub-unf05_space-other_T2w_seg-manual.json} (100%) rename derivatives/labels/sub-unf05/anat/{sub-unf05_T2w_seg-manual.nii.gz => sub-unf05_space-other_T2w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-unf06/anat/{sub-unf06_flip-1_mt-on_MTS_seg-manual.json => sub-unf06_flip-1_mt-on_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-unf06/anat/{sub-unf06_flip-1_mt-on_MTS_seg-manual.nii.gz => sub-unf06_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-unf06/anat/{sub-unf06_flip-2_mt-off_MTS_seg-manual.json => sub-unf06_flip-2_mt-off_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-unf06/anat/{sub-unf06_flip-2_mt-off_MTS_seg-manual.nii.gz => sub-unf06_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-unf06/anat/{sub-unf06_T1w_labels-disc-manual.json => sub-unf06_space-other_T1w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-unf06/anat/{sub-unf06_T1w_labels-disc-manual.nii.gz => sub-unf06_space-other_T1w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-unf06/anat/{sub-unf06_T1w_seg-manual.json => sub-unf06_space-other_T1w_seg-manual.json} (100%) rename derivatives/labels/sub-unf06/anat/{sub-unf06_T1w_seg-manual.nii.gz => sub-unf06_space-other_T1w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-unf06/anat/{sub-unf06_T2star_seg-manual.json => sub-unf06_space-other_T2star_seg-manual.json} (100%) rename derivatives/labels/sub-unf06/anat/{sub-unf06_T2star_seg-manual.nii.gz => sub-unf06_space-other_T2star_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-unf06/anat/{sub-unf06_T2w_labels-disc-manual.json => sub-unf06_space-other_T2w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-unf06/anat/{sub-unf06_T2w_labels-disc-manual.nii.gz => sub-unf06_space-other_T2w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-unf06/anat/{sub-unf06_T2w_seg-manual.json => sub-unf06_space-other_T2w_seg-manual.json} (100%) rename derivatives/labels/sub-unf06/anat/{sub-unf06_T2w_seg-manual.nii.gz => sub-unf06_space-other_T2w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-unf07/anat/{sub-unf07_T2star_seg-manual.json => sub-unf07_flip-1_mt-on_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-unf07/anat/{sub-unf07_flip-1_mt-on_MTS_seg-manual.nii.gz => sub-unf07_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-unf07/anat/{sub-unf07_flip-2_mt-off_MTS_seg-manual.json => sub-unf07_flip-2_mt-off_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-unf07/anat/{sub-unf07_flip-2_mt-off_MTS_seg-manual.nii.gz => sub-unf07_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-unf07/anat/{sub-unf07_T1w_labels-disc-manual.json => sub-unf07_space-other_T1w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-unf07/anat/{sub-unf07_T1w_labels-disc-manual.nii.gz => sub-unf07_space-other_T1w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-unf07/anat/{sub-unf07_T1w_seg-manual.json => sub-unf07_space-other_T1w_seg-manual.json} (100%) rename derivatives/labels/sub-unf07/anat/{sub-unf07_T1w_seg-manual.nii.gz => sub-unf07_space-other_T1w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-unf07/anat/{sub-unf07_flip-1_mt-on_MTS_seg-manual.json => sub-unf07_space-other_T2star_seg-manual.json} (100%) rename derivatives/labels/sub-unf07/anat/{sub-unf07_T2star_seg-manual.nii.gz => sub-unf07_space-other_T2star_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-unf07/anat/{sub-unf07_T2w_labels-disc-manual.json => sub-unf07_space-other_T2w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-unf07/anat/{sub-unf07_T2w_labels-disc-manual.nii.gz => sub-unf07_space-other_T2w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-unf07/anat/{sub-unf07_T2w_seg-manual.json => sub-unf07_space-other_T2w_seg-manual.json} (100%) rename derivatives/labels/sub-unf07/anat/{sub-unf07_T2w_seg-manual.nii.gz => sub-unf07_space-other_T2w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-vallHebron01/anat/{sub-vallHebron01_flip-1_mt-on_MTS_seg-manual.json => sub-vallHebron01_flip-1_mt-on_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-vallHebron01/anat/{sub-vallHebron01_flip-1_mt-on_MTS_seg-manual.nii.gz => sub-vallHebron01_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-vallHebron01/anat/{sub-vallHebron01_flip-2_mt-off_MTS_seg-manual.json => sub-vallHebron01_flip-2_mt-off_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-vallHebron01/anat/{sub-vallHebron01_flip-2_mt-off_MTS_seg-manual.nii.gz => sub-vallHebron01_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-vallHebron01/anat/{sub-vallHebron01_T1w_labels-disc-manual.json => sub-vallHebron01_space-other_T1w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-vallHebron01/anat/{sub-vallHebron01_T1w_labels-disc-manual.nii.gz => sub-vallHebron01_space-other_T1w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-vallHebron01/anat/{sub-vallHebron01_T1w_seg-manual.json => sub-vallHebron01_space-other_T1w_seg-manual.json} (100%) rename derivatives/labels/sub-vallHebron01/anat/{sub-vallHebron01_T1w_seg-manual.nii.gz => sub-vallHebron01_space-other_T1w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-vallHebron01/anat/{sub-vallHebron01_T2star_seg-manual.json => sub-vallHebron01_space-other_T2star_seg-manual.json} (100%) rename derivatives/labels/sub-vallHebron01/anat/{sub-vallHebron01_T2star_seg-manual.nii.gz => sub-vallHebron01_space-other_T2star_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-vallHebron01/anat/{sub-vallHebron01_T2w_labels-disc-manual.json => sub-vallHebron01_space-other_T2w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-vallHebron01/anat/{sub-vallHebron01_T2w_labels-disc-manual.nii.gz => sub-vallHebron01_space-other_T2w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-vallHebron01/anat/{sub-vallHebron01_T2w_seg-manual.json => sub-vallHebron01_space-other_T2w_seg-manual.json} (100%) rename derivatives/labels/sub-vallHebron01/anat/{sub-vallHebron01_T2w_seg-manual.nii.gz => sub-vallHebron01_space-other_T2w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-vallHebron02/anat/{sub-vallHebron02_flip-1_mt-on_MTS_seg-manual.json => sub-vallHebron02_flip-1_mt-on_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-vallHebron02/anat/{sub-vallHebron02_flip-1_mt-on_MTS_seg-manual.nii.gz => sub-vallHebron02_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-vallHebron02/anat/{sub-vallHebron02_flip-2_mt-off_MTS_seg-manual.json => sub-vallHebron02_flip-2_mt-off_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-vallHebron02/anat/{sub-vallHebron02_flip-2_mt-off_MTS_seg-manual.nii.gz => sub-vallHebron02_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-vallHebron02/anat/{sub-vallHebron02_T1w_labels-disc-manual.json => sub-vallHebron02_space-other_T1w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-vallHebron02/anat/{sub-vallHebron02_T1w_labels-disc-manual.nii.gz => sub-vallHebron02_space-other_T1w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-vallHebron02/anat/{sub-vallHebron02_T1w_seg-manual.json => sub-vallHebron02_space-other_T1w_seg-manual.json} (100%) rename derivatives/labels/sub-vallHebron02/anat/{sub-vallHebron02_T1w_seg-manual.nii.gz => sub-vallHebron02_space-other_T1w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-vallHebron02/anat/{sub-vallHebron02_T2star_seg-manual.json => sub-vallHebron02_space-other_T2star_seg-manual.json} (100%) rename derivatives/labels/sub-vallHebron02/anat/{sub-vallHebron02_T2star_seg-manual.nii.gz => sub-vallHebron02_space-other_T2star_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-vallHebron02/anat/{sub-vallHebron02_T2w_labels-disc-manual.json => sub-vallHebron02_space-other_T2w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-vallHebron02/anat/{sub-vallHebron02_T2w_labels-disc-manual.nii.gz => sub-vallHebron02_space-other_T2w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-vallHebron02/anat/{sub-vallHebron02_T2w_seg-manual.json => sub-vallHebron02_space-other_T2w_seg-manual.json} (100%) rename derivatives/labels/sub-vallHebron02/anat/{sub-vallHebron02_T2w_seg-manual.nii.gz => sub-vallHebron02_space-other_T2w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-vallHebron03/anat/{sub-vallHebron03_flip-1_mt-on_MTS_seg-manual.json => sub-vallHebron03_flip-1_mt-on_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-vallHebron03/anat/{sub-vallHebron03_flip-1_mt-on_MTS_seg-manual.nii.gz => sub-vallHebron03_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-vallHebron03/anat/{sub-vallHebron03_flip-2_mt-off_MTS_seg-manual.json => sub-vallHebron03_flip-2_mt-off_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-vallHebron03/anat/{sub-vallHebron03_flip-2_mt-off_MTS_seg-manual.nii.gz => sub-vallHebron03_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-vallHebron03/anat/{sub-vallHebron03_T1w_RPI_r_labels-manual.nii.gz => sub-vallHebron03_space-other_T1w_RPI_r_labels-manual.nii.gz} (100%) rename derivatives/labels/sub-vallHebron03/anat/{sub-vallHebron03_T1w_labels-disc-manual.json => sub-vallHebron03_space-other_T1w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-vallHebron03/anat/{sub-vallHebron03_T1w_labels-disc-manual.nii.gz => sub-vallHebron03_space-other_T1w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-vallHebron03/anat/{sub-vallHebron03_T1w_seg-manual.json => sub-vallHebron03_space-other_T1w_seg-manual.json} (100%) rename derivatives/labels/sub-vallHebron03/anat/{sub-vallHebron03_T1w_seg-manual.nii.gz => sub-vallHebron03_space-other_T1w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-vallHebron03/anat/{sub-vallHebron03_T2star_seg-manual.json => sub-vallHebron03_space-other_T2star_seg-manual.json} (100%) rename derivatives/labels/sub-vallHebron03/anat/{sub-vallHebron03_T2star_seg-manual.nii.gz => sub-vallHebron03_space-other_T2star_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-vallHebron03/anat/{sub-vallHebron03_T2w_labels-disc-manual.json => sub-vallHebron03_space-other_T2w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-vallHebron03/anat/{sub-vallHebron03_T2w_labels-disc-manual.nii.gz => sub-vallHebron03_space-other_T2w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-vallHebron03/anat/{sub-vallHebron03_T2w_seg-manual.json => sub-vallHebron03_space-other_T2w_seg-manual.json} (100%) rename derivatives/labels/sub-vallHebron03/anat/{sub-vallHebron03_T2w_seg-manual.nii.gz => sub-vallHebron03_space-other_T2w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-vallHebron04/anat/{sub-vallHebron04_flip-1_mt-on_MTS_seg-manual.json => sub-vallHebron04_flip-1_mt-on_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-vallHebron04/anat/{sub-vallHebron04_flip-1_mt-on_MTS_seg-manual.nii.gz => sub-vallHebron04_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-vallHebron04/anat/{sub-vallHebron04_flip-2_mt-off_MTS_seg-manual.json => sub-vallHebron04_flip-2_mt-off_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-vallHebron04/anat/{sub-vallHebron04_flip-2_mt-off_MTS_seg-manual.nii.gz => sub-vallHebron04_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-vallHebron04/anat/{sub-vallHebron04_T1w_labels-disc-manual.json => sub-vallHebron04_space-other_T1w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-vallHebron04/anat/{sub-vallHebron04_T1w_labels-disc-manual.nii.gz => sub-vallHebron04_space-other_T1w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-vallHebron04/anat/{sub-vallHebron04_T1w_seg-manual.json => sub-vallHebron04_space-other_T1w_seg-manual.json} (100%) rename derivatives/labels/sub-vallHebron04/anat/{sub-vallHebron04_T1w_seg-manual.nii.gz => sub-vallHebron04_space-other_T1w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-vallHebron04/anat/{sub-vallHebron04_T2star_seg-manual.json => sub-vallHebron04_space-other_T2star_seg-manual.json} (100%) rename derivatives/labels/sub-vallHebron04/anat/{sub-vallHebron04_T2star_seg-manual.nii.gz => sub-vallHebron04_space-other_T2star_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-vallHebron04/anat/{sub-vallHebron04_T2w_labels-disc-manual.json => sub-vallHebron04_space-other_T2w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-vallHebron04/anat/{sub-vallHebron04_T2w_labels-disc-manual.nii.gz => sub-vallHebron04_space-other_T2w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-vallHebron04/anat/{sub-vallHebron04_T2w_seg-manual.json => sub-vallHebron04_space-other_T2w_seg-manual.json} (100%) rename derivatives/labels/sub-vallHebron04/anat/{sub-vallHebron04_T2w_seg-manual.nii.gz => sub-vallHebron04_space-other_T2w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-vallHebron05/anat/{sub-vallHebron05_flip-1_mt-on_MTS_seg-manual.json => sub-vallHebron05_flip-1_mt-on_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-vallHebron05/anat/{sub-vallHebron05_flip-1_mt-on_MTS_seg-manual.nii.gz => sub-vallHebron05_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-vallHebron05/anat/{sub-vallHebron05_flip-2_mt-off_MTS_seg-manual.json => sub-vallHebron05_flip-2_mt-off_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-vallHebron05/anat/{sub-vallHebron05_flip-2_mt-off_MTS_seg-manual.nii.gz => sub-vallHebron05_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-vallHebron05/anat/{sub-vallHebron05_T1w_labels-disc-manual.json => sub-vallHebron05_space-other_T1w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-vallHebron05/anat/{sub-vallHebron05_T1w_labels-disc-manual.nii.gz => sub-vallHebron05_space-other_T1w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-vallHebron05/anat/{sub-vallHebron05_T1w_seg-manual.json => sub-vallHebron05_space-other_T1w_seg-manual.json} (100%) rename derivatives/labels/sub-vallHebron05/anat/{sub-vallHebron05_T1w_seg-manual.nii.gz => sub-vallHebron05_space-other_T1w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-vallHebron05/anat/{sub-vallHebron05_T2star_seg-manual.json => sub-vallHebron05_space-other_T2star_seg-manual.json} (100%) rename derivatives/labels/sub-vallHebron05/anat/{sub-vallHebron05_T2star_seg-manual.nii.gz => sub-vallHebron05_space-other_T2star_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-vallHebron05/anat/{sub-vallHebron05_T2w_labels-disc-manual.json => sub-vallHebron05_space-other_T2w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-vallHebron05/anat/{sub-vallHebron05_T2w_labels-disc-manual.nii.gz => sub-vallHebron05_space-other_T2w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-vallHebron05/anat/{sub-vallHebron05_T2w_seg-manual.json => sub-vallHebron05_space-other_T2w_seg-manual.json} (100%) rename derivatives/labels/sub-vallHebron05/anat/{sub-vallHebron05_T2w_seg-manual.nii.gz => sub-vallHebron05_space-other_T2w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-vallHebron06/anat/{sub-vallHebron06_T2star_seg-manual.json => sub-vallHebron06_flip-1_mt-on_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-vallHebron06/anat/{sub-vallHebron06_flip-1_mt-on_MTS_seg-manual.nii.gz => sub-vallHebron06_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-vallHebron06/anat/{sub-vallHebron06_flip-2_mt-off_MTS_seg-manual.json => sub-vallHebron06_flip-2_mt-off_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-vallHebron06/anat/{sub-vallHebron06_flip-2_mt-off_MTS_seg-manual.nii.gz => sub-vallHebron06_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-vallHebron06/anat/{sub-vallHebron06_T1w_labels-disc-manual.json => sub-vallHebron06_space-other_T1w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-vallHebron06/anat/{sub-vallHebron06_T1w_labels-disc-manual.nii.gz => sub-vallHebron06_space-other_T1w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-vallHebron06/anat/{sub-vallHebron06_T1w_seg-manual.json => sub-vallHebron06_space-other_T1w_seg-manual.json} (100%) rename derivatives/labels/sub-vallHebron06/anat/{sub-vallHebron06_T1w_seg-manual.nii.gz => sub-vallHebron06_space-other_T1w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-vallHebron06/anat/{sub-vallHebron06_flip-1_mt-on_MTS_seg-manual.json => sub-vallHebron06_space-other_T2star_seg-manual.json} (100%) rename derivatives/labels/sub-vallHebron06/anat/{sub-vallHebron06_T2star_seg-manual.nii.gz => sub-vallHebron06_space-other_T2star_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-vallHebron06/anat/{sub-vallHebron06_T2w_labels-disc-manual.json => sub-vallHebron06_space-other_T2w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-vallHebron06/anat/{sub-vallHebron06_T2w_labels-disc-manual.nii.gz => sub-vallHebron06_space-other_T2w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-vallHebron06/anat/{sub-vallHebron06_T2w_seg-manual.json => sub-vallHebron06_space-other_T2w_seg-manual.json} (100%) rename derivatives/labels/sub-vallHebron06/anat/{sub-vallHebron06_T2w_seg-manual.nii.gz => sub-vallHebron06_space-other_T2w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-vallHebron07/anat/{sub-vallHebron07_T2star_seg-manual.json => sub-vallHebron07_flip-1_mt-on_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-vallHebron07/anat/{sub-vallHebron07_flip-1_mt-on_MTS_seg-manual.nii.gz => sub-vallHebron07_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-vallHebron07/anat/{sub-vallHebron07_flip-2_mt-off_MTS_seg-manual.json => sub-vallHebron07_flip-2_mt-off_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-vallHebron07/anat/{sub-vallHebron07_flip-2_mt-off_MTS_seg-manual.nii.gz => sub-vallHebron07_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-vallHebron07/anat/{sub-vallHebron07_T1w_RPI_r_labels-manual.nii.gz => sub-vallHebron07_space-other_T1w_RPI_r_labels-manual.nii.gz} (100%) rename derivatives/labels/sub-vallHebron07/anat/{sub-vallHebron07_T1w_labels-disc-manual.json => sub-vallHebron07_space-other_T1w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-vallHebron07/anat/{sub-vallHebron07_T1w_labels-disc-manual.nii.gz => sub-vallHebron07_space-other_T1w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-vallHebron07/anat/{sub-vallHebron07_T1w_seg-manual.json => sub-vallHebron07_space-other_T1w_seg-manual.json} (100%) rename derivatives/labels/sub-vallHebron07/anat/{sub-vallHebron07_T1w_seg-manual.nii.gz => sub-vallHebron07_space-other_T1w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-vallHebron07/anat/{sub-vallHebron07_T2w_seg-manual.json => sub-vallHebron07_space-other_T2star_seg-manual.json} (100%) rename derivatives/labels/sub-vallHebron07/anat/{sub-vallHebron07_T2star_seg-manual.nii.gz => sub-vallHebron07_space-other_T2star_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-vallHebron07/anat/{sub-vallHebron07_T2w_labels-disc-manual.json => sub-vallHebron07_space-other_T2w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-vallHebron07/anat/{sub-vallHebron07_T2w_labels-disc-manual.nii.gz => sub-vallHebron07_space-other_T2w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-vallHebron07/anat/{sub-vallHebron07_flip-1_mt-on_MTS_seg-manual.json => sub-vallHebron07_space-other_T2w_seg-manual.json} (100%) rename derivatives/labels/sub-vallHebron07/anat/{sub-vallHebron07_T2w_seg-manual.nii.gz => sub-vallHebron07_space-other_T2w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-vuiisAchieva01/anat/{sub-vuiisAchieva01_T2w_seg-manual.json => sub-vuiisAchieva01_flip-1_mt-on_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-vuiisAchieva01/anat/{sub-vuiisAchieva01_flip-1_mt-on_MTS_seg-manual.nii.gz => sub-vuiisAchieva01_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-vuiisAchieva01/anat/{sub-vuiisAchieva01_flip-2_mt-off_MTS_seg-manual.json => sub-vuiisAchieva01_flip-2_mt-off_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-vuiisAchieva01/anat/{sub-vuiisAchieva01_flip-2_mt-off_MTS_seg-manual.nii.gz => sub-vuiisAchieva01_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-vuiisAchieva01/anat/{sub-vuiisAchieva01_T1w_labels-disc-manual.json => sub-vuiisAchieva01_space-other_T1w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-vuiisAchieva01/anat/{sub-vuiisAchieva01_T1w_labels-disc-manual.nii.gz => sub-vuiisAchieva01_space-other_T1w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-vuiisAchieva01/anat/{sub-vuiisAchieva01_T1w_seg-manual.json => sub-vuiisAchieva01_space-other_T1w_seg-manual.json} (100%) rename derivatives/labels/sub-vuiisAchieva01/anat/{sub-vuiisAchieva01_T1w_seg-manual.nii.gz => sub-vuiisAchieva01_space-other_T1w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-vuiisAchieva01/anat/{sub-vuiisAchieva01_T2star_gmseg-manual.json => sub-vuiisAchieva01_space-other_T2star_gmseg-manual.json} (100%) rename derivatives/labels/sub-vuiisAchieva01/anat/{sub-vuiisAchieva01_T2star_gmseg-manual.nii.gz => sub-vuiisAchieva01_space-other_T2star_gmseg-manual.nii.gz} (100%) rename derivatives/labels/sub-vuiisAchieva01/anat/{sub-vuiisAchieva01_T2star_seg-manual.json => sub-vuiisAchieva01_space-other_T2star_seg-manual.json} (100%) rename derivatives/labels/sub-vuiisAchieva01/anat/{sub-vuiisAchieva01_T2star_seg-manual.nii.gz => sub-vuiisAchieva01_space-other_T2star_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-vuiisAchieva01/anat/{sub-vuiisAchieva01_T2w_labels-disc-manual.json => sub-vuiisAchieva01_space-other_T2w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-vuiisAchieva01/anat/{sub-vuiisAchieva01_T2w_labels-disc-manual.nii.gz => sub-vuiisAchieva01_space-other_T2w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-vuiisAchieva01/anat/{sub-vuiisAchieva01_flip-1_mt-on_MTS_seg-manual.json => sub-vuiisAchieva01_space-other_T2w_seg-manual.json} (100%) rename derivatives/labels/sub-vuiisAchieva01/anat/{sub-vuiisAchieva01_T2w_seg-manual.nii.gz => sub-vuiisAchieva01_space-other_T2w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-vuiisAchieva02/anat/{sub-vuiisAchieva02_T2star_seg-manual.json => sub-vuiisAchieva02_flip-1_mt-on_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-vuiisAchieva02/anat/{sub-vuiisAchieva02_flip-1_mt-on_MTS_seg-manual.nii.gz => sub-vuiisAchieva02_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-vuiisAchieva02/anat/{sub-vuiisAchieva02_flip-2_mt-off_MTS_seg-manual.json => sub-vuiisAchieva02_flip-2_mt-off_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-vuiisAchieva02/anat/{sub-vuiisAchieva02_flip-2_mt-off_MTS_seg-manual.nii.gz => sub-vuiisAchieva02_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-vuiisAchieva02/anat/{sub-vuiisAchieva02_T1w_labels-disc-manual.json => sub-vuiisAchieva02_space-other_T1w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-vuiisAchieva02/anat/{sub-vuiisAchieva02_T1w_labels-disc-manual.nii.gz => sub-vuiisAchieva02_space-other_T1w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-vuiisAchieva02/anat/{sub-vuiisAchieva02_T1w_seg-manual.json => sub-vuiisAchieva02_space-other_T1w_seg-manual.json} (100%) rename derivatives/labels/sub-vuiisAchieva02/anat/{sub-vuiisAchieva02_T1w_seg-manual.nii.gz => sub-vuiisAchieva02_space-other_T1w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-vuiisAchieva02/anat/{sub-vuiisAchieva02_flip-1_mt-on_MTS_seg-manual.json => sub-vuiisAchieva02_space-other_T2star_seg-manual.json} (100%) rename derivatives/labels/sub-vuiisAchieva02/anat/{sub-vuiisAchieva02_T2star_seg-manual.nii.gz => sub-vuiisAchieva02_space-other_T2star_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-vuiisAchieva02/anat/{sub-vuiisAchieva02_T2w_labels-disc-manual.json => sub-vuiisAchieva02_space-other_T2w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-vuiisAchieva02/anat/{sub-vuiisAchieva02_T2w_labels-disc-manual.nii.gz => sub-vuiisAchieva02_space-other_T2w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-vuiisAchieva02/anat/{sub-vuiisAchieva02_T2w_seg-manual.json => sub-vuiisAchieva02_space-other_T2w_seg-manual.json} (100%) rename derivatives/labels/sub-vuiisAchieva02/anat/{sub-vuiisAchieva02_T2w_seg-manual.nii.gz => sub-vuiisAchieva02_space-other_T2w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-vuiisAchieva03/anat/{sub-vuiisAchieva03_T2star_seg-manual.json => sub-vuiisAchieva03_flip-1_mt-on_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-vuiisAchieva03/anat/{sub-vuiisAchieva03_flip-1_mt-on_MTS_seg-manual.nii.gz => sub-vuiisAchieva03_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-vuiisAchieva03/anat/{sub-vuiisAchieva03_flip-1_mt-on_MTS_seg-manual.json => sub-vuiisAchieva03_flip-2_mt-off_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-vuiisAchieva03/anat/{sub-vuiisAchieva03_flip-2_mt-off_MTS_seg-manual.nii.gz => sub-vuiisAchieva03_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-vuiisAchieva03/anat/{sub-vuiisAchieva03_T1w_labels-disc-manual.json => sub-vuiisAchieva03_space-other_T1w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-vuiisAchieva03/anat/{sub-vuiisAchieva03_T1w_labels-disc-manual.nii.gz => sub-vuiisAchieva03_space-other_T1w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-vuiisAchieva03/anat/{sub-vuiisAchieva03_T1w_seg-manual.json => sub-vuiisAchieva03_space-other_T1w_seg-manual.json} (100%) rename derivatives/labels/sub-vuiisAchieva03/anat/{sub-vuiisAchieva03_T1w_seg-manual.nii.gz => sub-vuiisAchieva03_space-other_T1w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-vuiisAchieva03/anat/{sub-vuiisAchieva03_flip-2_mt-off_MTS_seg-manual.json => sub-vuiisAchieva03_space-other_T2star_seg-manual.json} (100%) rename derivatives/labels/sub-vuiisAchieva03/anat/{sub-vuiisAchieva03_T2star_seg-manual.nii.gz => sub-vuiisAchieva03_space-other_T2star_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-vuiisAchieva03/anat/{sub-vuiisAchieva03_T2w_labels-disc-manual.json => sub-vuiisAchieva03_space-other_T2w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-vuiisAchieva03/anat/{sub-vuiisAchieva03_T2w_labels-disc-manual.nii.gz => sub-vuiisAchieva03_space-other_T2w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-vuiisAchieva03/anat/{sub-vuiisAchieva03_T2w_seg-manual.json => sub-vuiisAchieva03_space-other_T2w_seg-manual.json} (100%) rename derivatives/labels/sub-vuiisAchieva03/anat/{sub-vuiisAchieva03_T2w_seg-manual.nii.gz => sub-vuiisAchieva03_space-other_T2w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-vuiisAchieva04/anat/{sub-vuiisAchieva04_flip-1_mt-on_MTS_seg-manual.json => sub-vuiisAchieva04_flip-1_mt-on_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-vuiisAchieva04/anat/{sub-vuiisAchieva04_flip-1_mt-on_MTS_seg-manual.nii.gz => sub-vuiisAchieva04_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-vuiisAchieva04/anat/{sub-vuiisAchieva04_flip-2_mt-off_MTS_seg-manual.json => sub-vuiisAchieva04_flip-2_mt-off_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-vuiisAchieva04/anat/{sub-vuiisAchieva04_flip-2_mt-off_MTS_seg-manual.nii.gz => sub-vuiisAchieva04_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-vuiisAchieva04/anat/{sub-vuiisAchieva04_T1w_labels-disc-manual.json => sub-vuiisAchieva04_space-other_T1w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-vuiisAchieva04/anat/{sub-vuiisAchieva04_T1w_labels-disc-manual.nii.gz => sub-vuiisAchieva04_space-other_T1w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-vuiisAchieva04/anat/{sub-vuiisAchieva04_T1w_seg-manual.json => sub-vuiisAchieva04_space-other_T1w_seg-manual.json} (100%) rename derivatives/labels/sub-vuiisAchieva04/anat/{sub-vuiisAchieva04_T1w_seg-manual.nii.gz => sub-vuiisAchieva04_space-other_T1w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-vuiisAchieva04/anat/{sub-vuiisAchieva04_T2star_seg-manual.json => sub-vuiisAchieva04_space-other_T2star_seg-manual.json} (100%) rename derivatives/labels/sub-vuiisAchieva04/anat/{sub-vuiisAchieva04_T2star_seg-manual.nii.gz => sub-vuiisAchieva04_space-other_T2star_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-vuiisAchieva04/anat/{sub-vuiisAchieva04_T2w_labels-disc-manual.json => sub-vuiisAchieva04_space-other_T2w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-vuiisAchieva04/anat/{sub-vuiisAchieva04_T2w_labels-disc-manual.nii.gz => sub-vuiisAchieva04_space-other_T2w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-vuiisAchieva04/anat/{sub-vuiisAchieva04_T2w_seg-manual.json => sub-vuiisAchieva04_space-other_T2w_seg-manual.json} (100%) rename derivatives/labels/sub-vuiisAchieva04/anat/{sub-vuiisAchieva04_T2w_seg-manual.nii.gz => sub-vuiisAchieva04_space-other_T2w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-vuiisAchieva05/anat/{sub-vuiisAchieva05_T2star_seg-manual.json => sub-vuiisAchieva05_flip-1_mt-on_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-vuiisAchieva05/anat/{sub-vuiisAchieva05_flip-1_mt-on_MTS_seg-manual.nii.gz => sub-vuiisAchieva05_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-vuiisAchieva05/anat/{sub-vuiisAchieva05_flip-2_mt-off_MTS_seg-manual.json => sub-vuiisAchieva05_flip-2_mt-off_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-vuiisAchieva05/anat/{sub-vuiisAchieva05_flip-2_mt-off_MTS_seg-manual.nii.gz => sub-vuiisAchieva05_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-vuiisAchieva05/anat/{sub-vuiisAchieva05_T1w_labels-disc-manual.json => sub-vuiisAchieva05_space-other_T1w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-vuiisAchieva05/anat/{sub-vuiisAchieva05_T1w_labels-disc-manual.nii.gz => sub-vuiisAchieva05_space-other_T1w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-vuiisAchieva05/anat/{sub-vuiisAchieva05_T1w_seg-manual.json => sub-vuiisAchieva05_space-other_T1w_seg-manual.json} (100%) rename derivatives/labels/sub-vuiisAchieva05/anat/{sub-vuiisAchieva05_T1w_seg-manual.nii.gz => sub-vuiisAchieva05_space-other_T1w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-vuiisAchieva05/anat/{sub-vuiisAchieva05_T2w_seg-manual.json => sub-vuiisAchieva05_space-other_T2star_seg-manual.json} (100%) rename derivatives/labels/sub-vuiisAchieva05/anat/{sub-vuiisAchieva05_T2star_seg-manual.nii.gz => sub-vuiisAchieva05_space-other_T2star_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-vuiisAchieva05/anat/{sub-vuiisAchieva05_T2w_labels-disc-manual.json => sub-vuiisAchieva05_space-other_T2w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-vuiisAchieva05/anat/{sub-vuiisAchieva05_T2w_labels-disc-manual.nii.gz => sub-vuiisAchieva05_space-other_T2w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-vuiisAchieva05/anat/{sub-vuiisAchieva05_flip-1_mt-on_MTS_seg-manual.json => sub-vuiisAchieva05_space-other_T2w_seg-manual.json} (100%) rename derivatives/labels/sub-vuiisAchieva05/anat/{sub-vuiisAchieva05_T2w_seg-manual.nii.gz => sub-vuiisAchieva05_space-other_T2w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-vuiisAchieva06/anat/{sub-vuiisAchieva06_T2star_seg-manual.json => sub-vuiisAchieva06_flip-1_mt-on_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-vuiisAchieva06/anat/{sub-vuiisAchieva06_flip-1_mt-on_MTS_seg-manual.nii.gz => sub-vuiisAchieva06_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-vuiisAchieva06/anat/{sub-vuiisAchieva06_flip-1_mt-on_MTS_seg-manual.json => sub-vuiisAchieva06_flip-2_mt-off_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-vuiisAchieva06/anat/{sub-vuiisAchieva06_flip-2_mt-off_MTS_seg-manual.nii.gz => sub-vuiisAchieva06_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-vuiisAchieva06/anat/{sub-vuiisAchieva06_T1w_labels-disc-manual.json => sub-vuiisAchieva06_space-other_T1w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-vuiisAchieva06/anat/{sub-vuiisAchieva06_T1w_labels-disc-manual.nii.gz => sub-vuiisAchieva06_space-other_T1w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-vuiisAchieva06/anat/{sub-vuiisAchieva06_T1w_seg-manual.json => sub-vuiisAchieva06_space-other_T1w_seg-manual.json} (100%) rename derivatives/labels/sub-vuiisAchieva06/anat/{sub-vuiisAchieva06_T1w_seg-manual.nii.gz => sub-vuiisAchieva06_space-other_T1w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-vuiisAchieva06/anat/{sub-vuiisAchieva06_flip-2_mt-off_MTS_seg-manual.json => sub-vuiisAchieva06_space-other_T2star_seg-manual.json} (100%) rename derivatives/labels/sub-vuiisAchieva06/anat/{sub-vuiisAchieva06_T2star_seg-manual.nii.gz => sub-vuiisAchieva06_space-other_T2star_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-vuiisAchieva06/anat/{sub-vuiisAchieva06_T2w_labels-disc-manual.json => sub-vuiisAchieva06_space-other_T2w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-vuiisAchieva06/anat/{sub-vuiisAchieva06_T2w_labels-disc-manual.nii.gz => sub-vuiisAchieva06_space-other_T2w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-vuiisAchieva06/anat/{sub-vuiisAchieva06_T2w_seg-manual.json => sub-vuiisAchieva06_space-other_T2w_seg-manual.json} (100%) rename derivatives/labels/sub-vuiisAchieva06/anat/{sub-vuiisAchieva06_T2w_seg-manual.nii.gz => sub-vuiisAchieva06_space-other_T2w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-vuiisIngenia01/anat/{sub-vuiisIngenia01_T2star_seg-manual.json => sub-vuiisIngenia01_flip-1_mt-on_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-vuiisIngenia01/anat/{sub-vuiisIngenia01_flip-1_mt-on_MTS_seg-manual.nii.gz => sub-vuiisIngenia01_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-vuiisIngenia01/anat/{sub-vuiisIngenia01_flip-1_mt-on_MTS_seg-manual.json => sub-vuiisIngenia01_flip-2_mt-off_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-vuiisIngenia01/anat/{sub-vuiisIngenia01_flip-2_mt-off_MTS_seg-manual.nii.gz => sub-vuiisIngenia01_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-vuiisIngenia01/anat/{sub-vuiisIngenia01_T1w_labels-disc-manual.json => sub-vuiisIngenia01_space-other_T1w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-vuiisIngenia01/anat/{sub-vuiisIngenia01_T1w_labels-disc-manual.nii.gz => sub-vuiisIngenia01_space-other_T1w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-vuiisIngenia01/anat/{sub-vuiisIngenia01_T1w_seg-manual.json => sub-vuiisIngenia01_space-other_T1w_seg-manual.json} (100%) rename derivatives/labels/sub-vuiisIngenia01/anat/{sub-vuiisIngenia01_T1w_seg-manual.nii.gz => sub-vuiisIngenia01_space-other_T1w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-vuiisIngenia01/anat/{sub-vuiisIngenia01_flip-2_mt-off_MTS_seg-manual.json => sub-vuiisIngenia01_space-other_T2star_seg-manual.json} (100%) rename derivatives/labels/sub-vuiisIngenia01/anat/{sub-vuiisIngenia01_T2star_seg-manual.nii.gz => sub-vuiisIngenia01_space-other_T2star_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-vuiisIngenia01/anat/{sub-vuiisIngenia01_T2w_labels-disc-manual.json => sub-vuiisIngenia01_space-other_T2w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-vuiisIngenia01/anat/{sub-vuiisIngenia01_T2w_labels-disc-manual.nii.gz => sub-vuiisIngenia01_space-other_T2w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-vuiisIngenia01/anat/{sub-vuiisIngenia01_T2w_seg-manual.json => sub-vuiisIngenia01_space-other_T2w_seg-manual.json} (100%) rename derivatives/labels/sub-vuiisIngenia01/anat/{sub-vuiisIngenia01_T2w_seg-manual.nii.gz => sub-vuiisIngenia01_space-other_T2w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-vuiisIngenia02/anat/{sub-vuiisIngenia02_T2star_seg-manual.json => sub-vuiisIngenia02_flip-1_mt-on_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-vuiisIngenia02/anat/{sub-vuiisIngenia02_flip-1_mt-on_MTS_seg-manual.nii.gz => sub-vuiisIngenia02_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-vuiisIngenia02/anat/{sub-vuiisIngenia02_flip-2_mt-off_MTS_seg-manual.json => sub-vuiisIngenia02_flip-2_mt-off_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-vuiisIngenia02/anat/{sub-vuiisIngenia02_flip-2_mt-off_MTS_seg-manual.nii.gz => sub-vuiisIngenia02_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-vuiisIngenia02/anat/{sub-vuiisIngenia02_T1w_labels-disc-manual.json => sub-vuiisIngenia02_space-other_T1w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-vuiisIngenia02/anat/{sub-vuiisIngenia02_T1w_labels-disc-manual.nii.gz => sub-vuiisIngenia02_space-other_T1w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-vuiisIngenia02/anat/{sub-vuiisIngenia02_T1w_seg-manual.json => sub-vuiisIngenia02_space-other_T1w_seg-manual.json} (100%) rename derivatives/labels/sub-vuiisIngenia02/anat/{sub-vuiisIngenia02_T1w_seg-manual.nii.gz => sub-vuiisIngenia02_space-other_T1w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-vuiisIngenia02/anat/{sub-vuiisIngenia02_flip-1_mt-on_MTS_seg-manual.json => sub-vuiisIngenia02_space-other_T2star_seg-manual.json} (100%) rename derivatives/labels/sub-vuiisIngenia02/anat/{sub-vuiisIngenia02_T2star_seg-manual.nii.gz => sub-vuiisIngenia02_space-other_T2star_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-vuiisIngenia02/anat/{sub-vuiisIngenia02_T2w_labels-disc-manual.json => sub-vuiisIngenia02_space-other_T2w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-vuiisIngenia02/anat/{sub-vuiisIngenia02_T2w_labels-disc-manual.nii.gz => sub-vuiisIngenia02_space-other_T2w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-vuiisIngenia02/anat/{sub-vuiisIngenia02_T2w_seg-manual.json => sub-vuiisIngenia02_space-other_T2w_seg-manual.json} (100%) rename derivatives/labels/sub-vuiisIngenia02/anat/{sub-vuiisIngenia02_T2w_seg-manual.nii.gz => sub-vuiisIngenia02_space-other_T2w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-vuiisIngenia03/anat/{sub-vuiisIngenia03_T2star_seg-manual.json => sub-vuiisIngenia03_flip-1_mt-on_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-vuiisIngenia03/anat/{sub-vuiisIngenia03_flip-1_mt-on_MTS_seg-manual.nii.gz => sub-vuiisIngenia03_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-vuiisIngenia03/anat/{sub-vuiisIngenia03_flip-2_mt-off_MTS_seg-manual.json => sub-vuiisIngenia03_flip-2_mt-off_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-vuiisIngenia03/anat/{sub-vuiisIngenia03_flip-2_mt-off_MTS_seg-manual.nii.gz => sub-vuiisIngenia03_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-vuiisIngenia03/anat/{sub-vuiisIngenia03_T1w_labels-disc-manual.json => sub-vuiisIngenia03_space-other_T1w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-vuiisIngenia03/anat/{sub-vuiisIngenia03_T1w_labels-disc-manual.nii.gz => sub-vuiisIngenia03_space-other_T1w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-vuiisIngenia03/anat/{sub-vuiisIngenia03_T1w_seg-manual.json => sub-vuiisIngenia03_space-other_T1w_seg-manual.json} (100%) rename derivatives/labels/sub-vuiisIngenia03/anat/{sub-vuiisIngenia03_T1w_seg-manual.nii.gz => sub-vuiisIngenia03_space-other_T1w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-vuiisIngenia03/anat/{sub-vuiisIngenia03_T2star_gmseg-manual.json => sub-vuiisIngenia03_space-other_T2star_gmseg-manual.json} (100%) rename derivatives/labels/sub-vuiisIngenia03/anat/{sub-vuiisIngenia03_T2star_gmseg-manual.nii.gz => sub-vuiisIngenia03_space-other_T2star_gmseg-manual.nii.gz} (100%) rename derivatives/labels/sub-vuiisIngenia03/anat/{sub-vuiisIngenia03_flip-1_mt-on_MTS_seg-manual.json => sub-vuiisIngenia03_space-other_T2star_seg-manual.json} (100%) rename derivatives/labels/sub-vuiisIngenia03/anat/{sub-vuiisIngenia03_T2star_seg-manual.nii.gz => sub-vuiisIngenia03_space-other_T2star_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-vuiisIngenia03/anat/{sub-vuiisIngenia03_T2w_labels-disc-manual.json => sub-vuiisIngenia03_space-other_T2w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-vuiisIngenia03/anat/{sub-vuiisIngenia03_T2w_labels-disc-manual.nii.gz => sub-vuiisIngenia03_space-other_T2w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-vuiisIngenia03/anat/{sub-vuiisIngenia03_T2w_seg-manual.json => sub-vuiisIngenia03_space-other_T2w_seg-manual.json} (100%) rename derivatives/labels/sub-vuiisIngenia03/anat/{sub-vuiisIngenia03_T2w_seg-manual.nii.gz => sub-vuiisIngenia03_space-other_T2w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-vuiisIngenia04/anat/{sub-vuiisIngenia04_T2star_seg-manual.json => sub-vuiisIngenia04_flip-1_mt-on_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-vuiisIngenia04/anat/{sub-vuiisIngenia04_flip-1_mt-on_MTS_seg-manual.nii.gz => sub-vuiisIngenia04_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-vuiisIngenia04/anat/{sub-vuiisIngenia04_flip-2_mt-off_MTS_seg-manual.json => sub-vuiisIngenia04_flip-2_mt-off_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-vuiisIngenia04/anat/{sub-vuiisIngenia04_flip-2_mt-off_MTS_seg-manual.nii.gz => sub-vuiisIngenia04_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-vuiisIngenia04/anat/{sub-vuiisIngenia04_T1w_labels-disc-manual.json => sub-vuiisIngenia04_space-other_T1w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-vuiisIngenia04/anat/{sub-vuiisIngenia04_T1w_labels-disc-manual.nii.gz => sub-vuiisIngenia04_space-other_T1w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-vuiisIngenia04/anat/{sub-vuiisIngenia04_T1w_seg-manual.json => sub-vuiisIngenia04_space-other_T1w_seg-manual.json} (100%) rename derivatives/labels/sub-vuiisIngenia04/anat/{sub-vuiisIngenia04_T1w_seg-manual.nii.gz => sub-vuiisIngenia04_space-other_T1w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-vuiisIngenia04/anat/{sub-vuiisIngenia04_T2w_seg-manual.json => sub-vuiisIngenia04_space-other_T2star_seg-manual.json} (100%) rename derivatives/labels/sub-vuiisIngenia04/anat/{sub-vuiisIngenia04_T2star_seg-manual.nii.gz => sub-vuiisIngenia04_space-other_T2star_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-vuiisIngenia04/anat/{sub-vuiisIngenia04_T2w_labels-disc-manual.json => sub-vuiisIngenia04_space-other_T2w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-vuiisIngenia04/anat/{sub-vuiisIngenia04_T2w_labels-disc-manual.nii.gz => sub-vuiisIngenia04_space-other_T2w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-vuiisIngenia04/anat/{sub-vuiisIngenia04_flip-1_mt-on_MTS_seg-manual.json => sub-vuiisIngenia04_space-other_T2w_seg-manual.json} (100%) rename derivatives/labels/sub-vuiisIngenia04/anat/{sub-vuiisIngenia04_T2w_seg-manual.nii.gz => sub-vuiisIngenia04_space-other_T2w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-vuiisIngenia05/anat/{sub-vuiisIngenia05_flip-1_mt-on_MTS_seg-manual.json => sub-vuiisIngenia05_flip-1_mt-on_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-vuiisIngenia05/anat/{sub-vuiisIngenia05_flip-1_mt-on_MTS_seg-manual.nii.gz => sub-vuiisIngenia05_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-vuiisIngenia05/anat/{sub-vuiisIngenia05_flip-2_mt-off_MTS_seg-manual.json => sub-vuiisIngenia05_flip-2_mt-off_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-vuiisIngenia05/anat/{sub-vuiisIngenia05_flip-2_mt-off_MTS_seg-manual.nii.gz => sub-vuiisIngenia05_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-vuiisIngenia05/anat/{sub-vuiisIngenia05_T1w_RPI_r_labels-manual.nii.gz => sub-vuiisIngenia05_space-other_T1w_RPI_r_labels-manual.nii.gz} (100%) rename derivatives/labels/sub-vuiisIngenia05/anat/{sub-vuiisIngenia05_T1w_labels-disc-manual.json => sub-vuiisIngenia05_space-other_T1w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-vuiisIngenia05/anat/{sub-vuiisIngenia05_T1w_labels-disc-manual.nii.gz => sub-vuiisIngenia05_space-other_T1w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-vuiisIngenia05/anat/{sub-vuiisIngenia05_T1w_seg-manual.json => sub-vuiisIngenia05_space-other_T1w_seg-manual.json} (100%) rename derivatives/labels/sub-vuiisIngenia05/anat/{sub-vuiisIngenia05_T1w_seg-manual.nii.gz => sub-vuiisIngenia05_space-other_T1w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-vuiisIngenia05/anat/{sub-vuiisIngenia05_T2star_seg-manual.json => sub-vuiisIngenia05_space-other_T2star_seg-manual.json} (100%) rename derivatives/labels/sub-vuiisIngenia05/anat/{sub-vuiisIngenia05_T2star_seg-manual.nii.gz => sub-vuiisIngenia05_space-other_T2star_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-vuiisIngenia05/anat/{sub-vuiisIngenia05_T2w_labels-disc-manual.json => sub-vuiisIngenia05_space-other_T2w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-vuiisIngenia05/anat/{sub-vuiisIngenia05_T2w_labels-disc-manual.nii.gz => sub-vuiisIngenia05_space-other_T2w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-vuiisIngenia05/anat/{sub-vuiisIngenia05_T2w_seg-manual.json => sub-vuiisIngenia05_space-other_T2w_seg-manual.json} (100%) rename derivatives/labels/sub-vuiisIngenia05/anat/{sub-vuiisIngenia05_T2w_seg-manual.nii.gz => sub-vuiisIngenia05_space-other_T2w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-vuiisIngenia06/anat/{sub-vuiisIngenia06_T2star_seg-manual.json => sub-vuiisIngenia06_flip-1_mt-on_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-vuiisIngenia06/anat/{sub-vuiisIngenia06_flip-1_mt-on_MTS_seg-manual.nii.gz => sub-vuiisIngenia06_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-vuiisIngenia06/anat/{sub-vuiisIngenia06_T2w_seg-manual.json => sub-vuiisIngenia06_flip-2_mt-off_space-other_MTS_seg-manual.json} (100%) rename derivatives/labels/sub-vuiisIngenia06/anat/{sub-vuiisIngenia06_flip-2_mt-off_MTS_seg-manual.nii.gz => sub-vuiisIngenia06_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-vuiisIngenia06/anat/{sub-vuiisIngenia06_T1w_labels-disc-manual.json => sub-vuiisIngenia06_space-other_T1w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-vuiisIngenia06/anat/{sub-vuiisIngenia06_T1w_labels-disc-manual.nii.gz => sub-vuiisIngenia06_space-other_T1w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-vuiisIngenia06/anat/{sub-vuiisIngenia06_T1w_seg-manual.json => sub-vuiisIngenia06_space-other_T1w_seg-manual.json} (100%) rename derivatives/labels/sub-vuiisIngenia06/anat/{sub-vuiisIngenia06_T1w_seg-manual.nii.gz => sub-vuiisIngenia06_space-other_T1w_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-vuiisIngenia06/anat/{sub-vuiisIngenia06_flip-1_mt-on_MTS_seg-manual.json => sub-vuiisIngenia06_space-other_T2star_seg-manual.json} (100%) rename derivatives/labels/sub-vuiisIngenia06/anat/{sub-vuiisIngenia06_T2star_seg-manual.nii.gz => sub-vuiisIngenia06_space-other_T2star_seg-manual.nii.gz} (100%) rename derivatives/labels/sub-vuiisIngenia06/anat/{sub-vuiisIngenia06_T2w_labels-disc-manual.json => sub-vuiisIngenia06_space-other_T2w_labels-disc-manual.json} (100%) rename derivatives/labels/sub-vuiisIngenia06/anat/{sub-vuiisIngenia06_T2w_labels-disc-manual.nii.gz => sub-vuiisIngenia06_space-other_T2w_labels-disc-manual.nii.gz} (100%) rename derivatives/labels/sub-vuiisIngenia06/anat/{sub-vuiisIngenia06_flip-2_mt-off_MTS_seg-manual.json => sub-vuiisIngenia06_space-other_T2w_seg-manual.json} (100%) rename derivatives/labels/sub-vuiisIngenia06/anat/{sub-vuiisIngenia06_T2w_seg-manual.nii.gz => sub-vuiisIngenia06_space-other_T2w_seg-manual.nii.gz} (100%) rename derivatives/labels_softseg/sub-amu01/anat/{sub-amu01_T1w_softseg.json => sub-amu01_flip-1_mt-on_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-amu01/anat/{sub-amu01_flip-1_mt-on_MTS_softseg.nii.gz => sub-amu01_flip-1_mt-on_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-amu01/anat/{sub-amu01_T2star_softseg.json => sub-amu01_flip-2_mt-off_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-amu01/anat/{sub-amu01_flip-2_mt-off_MTS_softseg.nii.gz => sub-amu01_flip-2_mt-off_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-amu01/anat/{sub-amu01_T2w_softseg.json => sub-amu01_space-other_T1w_softseg.json} (100%) rename derivatives/labels_softseg/sub-amu01/anat/{sub-amu01_T1w_softseg.nii.gz => sub-amu01_space-other_T1w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-amu01/anat/{sub-amu01_flip-1_mt-on_MTS_softseg.json => sub-amu01_space-other_T2star_softseg.json} (100%) rename derivatives/labels_softseg/sub-amu01/anat/{sub-amu01_T2star_softseg.nii.gz => sub-amu01_space-other_T2star_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-amu01/anat/{sub-amu01_flip-2_mt-off_MTS_softseg.json => sub-amu01_space-other_T2w_softseg.json} (100%) rename derivatives/labels_softseg/sub-amu01/anat/{sub-amu01_T2w_softseg.nii.gz => sub-amu01_space-other_T2w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-amu02/anat/{sub-amu02_T1w_softseg.json => sub-amu02_flip-1_mt-on_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-amu02/anat/{sub-amu02_flip-1_mt-on_MTS_softseg.nii.gz => sub-amu02_flip-1_mt-on_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-amu02/anat/{sub-amu02_T2star_softseg.json => sub-amu02_flip-2_mt-off_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-amu02/anat/{sub-amu02_flip-2_mt-off_MTS_softseg.nii.gz => sub-amu02_flip-2_mt-off_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-amu02/anat/{sub-amu02_T2w_softseg.json => sub-amu02_space-other_T1w_softseg.json} (100%) rename derivatives/labels_softseg/sub-amu02/anat/{sub-amu02_T1w_softseg.nii.gz => sub-amu02_space-other_T1w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-amu02/anat/{sub-amu02_flip-1_mt-on_MTS_softseg.json => sub-amu02_space-other_T2star_softseg.json} (100%) rename derivatives/labels_softseg/sub-amu02/anat/{sub-amu02_T2star_softseg.nii.gz => sub-amu02_space-other_T2star_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-amu02/anat/{sub-amu02_flip-2_mt-off_MTS_softseg.json => sub-amu02_space-other_T2w_softseg.json} (100%) rename derivatives/labels_softseg/sub-amu02/anat/{sub-amu02_T2w_softseg.nii.gz => sub-amu02_space-other_T2w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-amu03/anat/{sub-amu03_T1w_softseg.json => sub-amu03_flip-1_mt-on_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-amu03/anat/{sub-amu03_flip-1_mt-on_MTS_softseg.nii.gz => sub-amu03_flip-1_mt-on_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-amu03/anat/{sub-amu03_T2star_softseg.json => sub-amu03_flip-2_mt-off_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-amu03/anat/{sub-amu03_flip-2_mt-off_MTS_softseg.nii.gz => sub-amu03_flip-2_mt-off_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-amu03/anat/{sub-amu03_T2w_softseg.json => sub-amu03_space-other_T1w_softseg.json} (100%) rename derivatives/labels_softseg/sub-amu03/anat/{sub-amu03_T1w_softseg.nii.gz => sub-amu03_space-other_T1w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-amu03/anat/{sub-amu03_flip-1_mt-on_MTS_softseg.json => sub-amu03_space-other_T2star_softseg.json} (100%) rename derivatives/labels_softseg/sub-amu03/anat/{sub-amu03_T2star_softseg.nii.gz => sub-amu03_space-other_T2star_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-amu03/anat/{sub-amu03_flip-2_mt-off_MTS_softseg.json => sub-amu03_space-other_T2w_softseg.json} (100%) rename derivatives/labels_softseg/sub-amu03/anat/{sub-amu03_T2w_softseg.nii.gz => sub-amu03_space-other_T2w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-amu04/anat/{sub-amu04_T1w_softseg.json => sub-amu04_flip-1_mt-on_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-amu04/anat/{sub-amu04_flip-1_mt-on_MTS_softseg.nii.gz => sub-amu04_flip-1_mt-on_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-amu04/anat/{sub-amu04_T2star_softseg.json => sub-amu04_flip-2_mt-off_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-amu04/anat/{sub-amu04_flip-2_mt-off_MTS_softseg.nii.gz => sub-amu04_flip-2_mt-off_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-amu04/anat/{sub-amu04_flip-1_mt-on_MTS_softseg.json => sub-amu04_space-other_T1w_softseg.json} (100%) rename derivatives/labels_softseg/sub-amu04/anat/{sub-amu04_T1w_softseg.nii.gz => sub-amu04_space-other_T1w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-amu04/anat/{sub-amu04_flip-2_mt-off_MTS_softseg.json => sub-amu04_space-other_T2star_softseg.json} (100%) rename derivatives/labels_softseg/sub-amu04/anat/{sub-amu04_T2star_softseg.nii.gz => sub-amu04_space-other_T2star_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-amu04/anat/{sub-amu04_T2w_softseg.json => sub-amu04_space-other_T2w_softseg.json} (100%) rename derivatives/labels_softseg/sub-amu04/anat/{sub-amu04_T2w_softseg.nii.gz => sub-amu04_space-other_T2w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-amu05/anat/{sub-amu05_T1w_softseg.json => sub-amu05_flip-1_mt-on_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-amu05/anat/{sub-amu05_flip-1_mt-on_MTS_softseg.nii.gz => sub-amu05_flip-1_mt-on_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-amu05/anat/{sub-amu05_T2star_softseg.json => sub-amu05_flip-2_mt-off_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-amu05/anat/{sub-amu05_flip-2_mt-off_MTS_softseg.nii.gz => sub-amu05_flip-2_mt-off_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-amu05/anat/{sub-amu05_T2w_softseg.json => sub-amu05_space-other_T1w_softseg.json} (100%) rename derivatives/labels_softseg/sub-amu05/anat/{sub-amu05_T1w_softseg.nii.gz => sub-amu05_space-other_T1w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-amu05/anat/{sub-amu05_flip-1_mt-on_MTS_softseg.json => sub-amu05_space-other_T2star_softseg.json} (100%) rename derivatives/labels_softseg/sub-amu05/anat/{sub-amu05_T2star_softseg.nii.gz => sub-amu05_space-other_T2star_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-amu05/anat/{sub-amu05_flip-2_mt-off_MTS_softseg.json => sub-amu05_space-other_T2w_softseg.json} (100%) rename derivatives/labels_softseg/sub-amu05/anat/{sub-amu05_T2w_softseg.nii.gz => sub-amu05_space-other_T2w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-balgrist01/anat/{sub-balgrist01_T1w_softseg.json => sub-balgrist01_flip-1_mt-on_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-balgrist01/anat/{sub-balgrist01_flip-1_mt-on_MTS_softseg.nii.gz => sub-balgrist01_flip-1_mt-on_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-balgrist01/anat/{sub-balgrist01_T2star_softseg.json => sub-balgrist01_flip-2_mt-off_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-balgrist01/anat/{sub-balgrist01_flip-2_mt-off_MTS_softseg.nii.gz => sub-balgrist01_flip-2_mt-off_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-balgrist01/anat/{sub-balgrist01_T2w_softseg.json => sub-balgrist01_space-other_T1w_softseg.json} (100%) rename derivatives/labels_softseg/sub-balgrist01/anat/{sub-balgrist01_T1w_softseg.nii.gz => sub-balgrist01_space-other_T1w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-balgrist01/anat/{sub-balgrist01_flip-1_mt-on_MTS_softseg.json => sub-balgrist01_space-other_T2star_softseg.json} (100%) rename derivatives/labels_softseg/sub-balgrist01/anat/{sub-balgrist01_T2star_softseg.nii.gz => sub-balgrist01_space-other_T2star_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-balgrist01/anat/{sub-balgrist01_flip-2_mt-off_MTS_softseg.json => sub-balgrist01_space-other_T2w_softseg.json} (100%) rename derivatives/labels_softseg/sub-balgrist01/anat/{sub-balgrist01_T2w_softseg.nii.gz => sub-balgrist01_space-other_T2w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-balgrist02/anat/{sub-balgrist02_flip-1_mt-on_MTS.json => sub-balgrist02_flip-1_mt-on_space-other_MTS.json} (100%) rename derivatives/labels_softseg/sub-balgrist02/anat/{sub-balgrist02_flip-1_mt-on_MTS.nii.gz => sub-balgrist02_flip-1_mt-on_space-other_MTS.nii.gz} (100%) rename derivatives/labels_softseg/sub-balgrist02/anat/{sub-balgrist02_T1w_softseg.json => sub-balgrist02_flip-1_mt-on_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-balgrist02/anat/{sub-balgrist02_flip-1_mt-on_MTS_softseg.nii.gz => sub-balgrist02_flip-1_mt-on_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-balgrist02/anat/{sub-balgrist02_T2star_softseg.json => sub-balgrist02_flip-2_mt-off_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-balgrist02/anat/{sub-balgrist02_flip-2_mt-off_MTS_softseg.nii.gz => sub-balgrist02_flip-2_mt-off_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-balgrist02/anat/{sub-balgrist02_T2w_softseg.json => sub-balgrist02_space-other_T1w_softseg.json} (100%) rename derivatives/labels_softseg/sub-balgrist02/anat/{sub-balgrist02_T1w_softseg.nii.gz => sub-balgrist02_space-other_T1w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-balgrist02/anat/{sub-balgrist02_flip-1_mt-on_MTS_softseg.json => sub-balgrist02_space-other_T2star_softseg.json} (100%) rename derivatives/labels_softseg/sub-balgrist02/anat/{sub-balgrist02_T2star_softseg.nii.gz => sub-balgrist02_space-other_T2star_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-balgrist02/anat/{sub-balgrist02_flip-2_mt-off_MTS_softseg.json => sub-balgrist02_space-other_T2w_softseg.json} (100%) rename derivatives/labels_softseg/sub-balgrist02/anat/{sub-balgrist02_T2w_softseg.nii.gz => sub-balgrist02_space-other_T2w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-balgrist03/anat/{sub-balgrist03_T1w_softseg.json => sub-balgrist03_flip-1_mt-on_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-balgrist03/anat/{sub-balgrist03_flip-1_mt-on_MTS_softseg.nii.gz => sub-balgrist03_flip-1_mt-on_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-balgrist03/anat/{sub-balgrist03_T2star_softseg.json => sub-balgrist03_flip-2_mt-off_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-balgrist03/anat/{sub-balgrist03_flip-2_mt-off_MTS_softseg.nii.gz => sub-balgrist03_flip-2_mt-off_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-balgrist03/anat/{sub-balgrist03_flip-1_mt-on_MTS_softseg.json => sub-balgrist03_space-other_T1w_softseg.json} (100%) rename derivatives/labels_softseg/sub-balgrist03/anat/{sub-balgrist03_T1w_softseg.nii.gz => sub-balgrist03_space-other_T1w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-balgrist03/anat/{sub-balgrist03_flip-2_mt-off_MTS_softseg.json => sub-balgrist03_space-other_T2star_softseg.json} (100%) rename derivatives/labels_softseg/sub-balgrist03/anat/{sub-balgrist03_T2star_softseg.nii.gz => sub-balgrist03_space-other_T2star_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-balgrist03/anat/{sub-balgrist03_T2w_softseg.json => sub-balgrist03_space-other_T2w_softseg.json} (100%) rename derivatives/labels_softseg/sub-balgrist03/anat/{sub-balgrist03_T2w_softseg.nii.gz => sub-balgrist03_space-other_T2w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-balgrist04/anat/{sub-balgrist04_T1w_softseg.json => sub-balgrist04_flip-1_mt-on_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-balgrist04/anat/{sub-balgrist04_flip-1_mt-on_MTS_softseg.nii.gz => sub-balgrist04_flip-1_mt-on_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-balgrist04/anat/{sub-balgrist04_T2star_softseg.json => sub-balgrist04_flip-2_mt-off_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-balgrist04/anat/{sub-balgrist04_flip-2_mt-off_MTS_softseg.nii.gz => sub-balgrist04_flip-2_mt-off_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-balgrist04/anat/{sub-balgrist04_T2w_softseg.json => sub-balgrist04_space-other_T1w_softseg.json} (100%) rename derivatives/labels_softseg/sub-balgrist04/anat/{sub-balgrist04_T1w_softseg.nii.gz => sub-balgrist04_space-other_T1w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-balgrist04/anat/{sub-balgrist04_flip-1_mt-on_MTS_softseg.json => sub-balgrist04_space-other_T2star_softseg.json} (100%) rename derivatives/labels_softseg/sub-balgrist04/anat/{sub-balgrist04_T2star_softseg.nii.gz => sub-balgrist04_space-other_T2star_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-balgrist04/anat/{sub-balgrist04_flip-2_mt-off_MTS_softseg.json => sub-balgrist04_space-other_T2w_softseg.json} (100%) rename derivatives/labels_softseg/sub-balgrist04/anat/{sub-balgrist04_T2w_softseg.nii.gz => sub-balgrist04_space-other_T2w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-balgrist05/anat/{sub-balgrist05_T1w_softseg.json => sub-balgrist05_flip-1_mt-on_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-balgrist05/anat/{sub-balgrist05_flip-1_mt-on_MTS_softseg.nii.gz => sub-balgrist05_flip-1_mt-on_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-balgrist05/anat/{sub-balgrist05_T2star_softseg.json => sub-balgrist05_flip-2_mt-off_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-balgrist05/anat/{sub-balgrist05_flip-2_mt-off_MTS_softseg.nii.gz => sub-balgrist05_flip-2_mt-off_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-balgrist05/anat/{sub-balgrist05_T2w_softseg.json => sub-balgrist05_space-other_T1w_softseg.json} (100%) rename derivatives/labels_softseg/sub-balgrist05/anat/{sub-balgrist05_T1w_softseg.nii.gz => sub-balgrist05_space-other_T1w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-balgrist05/anat/{sub-balgrist05_flip-1_mt-on_MTS_softseg.json => sub-balgrist05_space-other_T2star_softseg.json} (100%) rename derivatives/labels_softseg/sub-balgrist05/anat/{sub-balgrist05_T2star_softseg.nii.gz => sub-balgrist05_space-other_T2star_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-balgrist05/anat/{sub-balgrist05_flip-2_mt-off_MTS_softseg.json => sub-balgrist05_space-other_T2w_softseg.json} (100%) rename derivatives/labels_softseg/sub-balgrist05/anat/{sub-balgrist05_T2w_softseg.nii.gz => sub-balgrist05_space-other_T2w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-balgrist06/anat/{sub-balgrist06_T1w_softseg.json => sub-balgrist06_flip-1_mt-on_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-balgrist06/anat/{sub-balgrist06_flip-1_mt-on_MTS_softseg.nii.gz => sub-balgrist06_flip-1_mt-on_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-balgrist06/anat/{sub-balgrist06_T2star_softseg.json => sub-balgrist06_flip-2_mt-off_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-balgrist06/anat/{sub-balgrist06_flip-2_mt-off_MTS_softseg.nii.gz => sub-balgrist06_flip-2_mt-off_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-balgrist06/anat/{sub-balgrist06_T2w_softseg.json => sub-balgrist06_space-other_T1w_softseg.json} (100%) rename derivatives/labels_softseg/sub-balgrist06/anat/{sub-balgrist06_T1w_softseg.nii.gz => sub-balgrist06_space-other_T1w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-balgrist06/anat/{sub-balgrist06_flip-1_mt-on_MTS_softseg.json => sub-balgrist06_space-other_T2star_softseg.json} (100%) rename derivatives/labels_softseg/sub-balgrist06/anat/{sub-balgrist06_T2star_softseg.nii.gz => sub-balgrist06_space-other_T2star_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-balgrist06/anat/{sub-balgrist06_flip-2_mt-off_MTS_softseg.json => sub-balgrist06_space-other_T2w_softseg.json} (100%) rename derivatives/labels_softseg/sub-balgrist06/anat/{sub-balgrist06_T2w_softseg.nii.gz => sub-balgrist06_space-other_T2w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-barcelona01/anat/{sub-barcelona01_T1w_softseg.json => sub-barcelona01_flip-1_mt-on_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-barcelona01/anat/{sub-barcelona01_flip-1_mt-on_MTS_softseg.nii.gz => sub-barcelona01_flip-1_mt-on_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-barcelona01/anat/{sub-barcelona01_T2star_softseg.json => sub-barcelona01_flip-2_mt-off_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-barcelona01/anat/{sub-barcelona01_flip-2_mt-off_MTS_softseg.nii.gz => sub-barcelona01_flip-2_mt-off_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-barcelona01/anat/{sub-barcelona01_T2w_softseg.json => sub-barcelona01_space-other_T1w_softseg.json} (100%) rename derivatives/labels_softseg/sub-barcelona01/anat/{sub-barcelona01_T1w_softseg.nii.gz => sub-barcelona01_space-other_T1w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-barcelona01/anat/{sub-barcelona01_flip-1_mt-on_MTS_softseg.json => sub-barcelona01_space-other_T2star_softseg.json} (100%) rename derivatives/labels_softseg/sub-barcelona01/anat/{sub-barcelona01_T2star_softseg.nii.gz => sub-barcelona01_space-other_T2star_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-barcelona01/anat/{sub-barcelona01_flip-2_mt-off_MTS_softseg.json => sub-barcelona01_space-other_T2w_softseg.json} (100%) rename derivatives/labels_softseg/sub-barcelona01/anat/{sub-barcelona01_T2w_softseg.nii.gz => sub-barcelona01_space-other_T2w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-barcelona02/anat/{sub-barcelona02_flip-1_mt-on_MTS.json => sub-barcelona02_flip-1_mt-on_space-other_MTS.json} (100%) rename derivatives/labels_softseg/sub-barcelona02/anat/{sub-barcelona02_flip-1_mt-on_MTS.nii.gz => sub-barcelona02_flip-1_mt-on_space-other_MTS.nii.gz} (100%) rename derivatives/labels_softseg/sub-barcelona02/anat/{sub-barcelona02_T1w_softseg.json => sub-barcelona02_flip-1_mt-on_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-barcelona02/anat/{sub-barcelona02_flip-1_mt-on_MTS_softseg.nii.gz => sub-barcelona02_flip-1_mt-on_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-barcelona02/anat/{sub-barcelona02_T2star_softseg.json => sub-barcelona02_flip-2_mt-off_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-barcelona02/anat/{sub-barcelona02_flip-2_mt-off_MTS_softseg.nii.gz => sub-barcelona02_flip-2_mt-off_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-barcelona02/anat/{sub-barcelona02_T2w_softseg.json => sub-barcelona02_space-other_T1w_softseg.json} (100%) rename derivatives/labels_softseg/sub-barcelona02/anat/{sub-barcelona02_T1w_softseg.nii.gz => sub-barcelona02_space-other_T1w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-barcelona02/anat/{sub-barcelona02_flip-1_mt-on_MTS_softseg.json => sub-barcelona02_space-other_T2star_softseg.json} (100%) rename derivatives/labels_softseg/sub-barcelona02/anat/{sub-barcelona02_T2star_softseg.nii.gz => sub-barcelona02_space-other_T2star_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-barcelona02/anat/{sub-barcelona02_T2w.json => sub-barcelona02_space-other_T2w.json} (100%) rename derivatives/labels_softseg/sub-barcelona02/anat/{sub-barcelona02_T2w.nii.gz => sub-barcelona02_space-other_T2w.nii.gz} (100%) rename derivatives/labels_softseg/sub-barcelona02/anat/{sub-barcelona02_flip-2_mt-off_MTS_softseg.json => sub-barcelona02_space-other_T2w_softseg.json} (100%) rename derivatives/labels_softseg/sub-barcelona02/anat/{sub-barcelona02_T2w_softseg.nii.gz => sub-barcelona02_space-other_T2w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-barcelona03/anat/{sub-barcelona03_T1w_softseg.json => sub-barcelona03_flip-1_mt-on_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-barcelona03/anat/{sub-barcelona03_flip-1_mt-on_MTS_softseg.nii.gz => sub-barcelona03_flip-1_mt-on_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-barcelona03/anat/{sub-barcelona03_T2star_softseg.json => sub-barcelona03_flip-2_mt-off_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-barcelona03/anat/{sub-barcelona03_flip-2_mt-off_MTS_softseg.nii.gz => sub-barcelona03_flip-2_mt-off_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-barcelona03/anat/{sub-barcelona03_T2w_softseg.json => sub-barcelona03_space-other_T1w_softseg.json} (100%) rename derivatives/labels_softseg/sub-barcelona03/anat/{sub-barcelona03_T1w_softseg.nii.gz => sub-barcelona03_space-other_T1w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-barcelona03/anat/{sub-barcelona03_flip-1_mt-on_MTS_softseg.json => sub-barcelona03_space-other_T2star_softseg.json} (100%) rename derivatives/labels_softseg/sub-barcelona03/anat/{sub-barcelona03_T2star_softseg.nii.gz => sub-barcelona03_space-other_T2star_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-barcelona03/anat/{sub-barcelona03_flip-2_mt-off_MTS_softseg.json => sub-barcelona03_space-other_T2w_softseg.json} (100%) rename derivatives/labels_softseg/sub-barcelona03/anat/{sub-barcelona03_T2w_softseg.nii.gz => sub-barcelona03_space-other_T2w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-barcelona04/anat/{sub-barcelona04_T1w_softseg.json => sub-barcelona04_flip-1_mt-on_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-barcelona04/anat/{sub-barcelona04_flip-1_mt-on_MTS_softseg.nii.gz => sub-barcelona04_flip-1_mt-on_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-barcelona04/anat/{sub-barcelona04_flip-1_mt-on_MTS_softseg.json => sub-barcelona04_flip-2_mt-off_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-barcelona04/anat/{sub-barcelona04_flip-2_mt-off_MTS_softseg.nii.gz => sub-barcelona04_flip-2_mt-off_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-barcelona04/anat/{sub-barcelona04_flip-2_mt-off_MTS_softseg.json => sub-barcelona04_space-other_T1w_softseg.json} (100%) rename derivatives/labels_softseg/sub-barcelona04/anat/{sub-barcelona04_T1w_softseg.nii.gz => sub-barcelona04_space-other_T1w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-barcelona04/anat/{sub-barcelona04_T2star_softseg.json => sub-barcelona04_space-other_T2star_softseg.json} (100%) rename derivatives/labels_softseg/sub-barcelona04/anat/{sub-barcelona04_T2star_softseg.nii.gz => sub-barcelona04_space-other_T2star_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-barcelona04/anat/{sub-barcelona04_T2w_softseg.json => sub-barcelona04_space-other_T2w_softseg.json} (100%) rename derivatives/labels_softseg/sub-barcelona04/anat/{sub-barcelona04_T2w_softseg.nii.gz => sub-barcelona04_space-other_T2w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-barcelona05/anat/{sub-barcelona05_T1w_softseg.json => sub-barcelona05_flip-1_mt-on_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-barcelona05/anat/{sub-barcelona05_flip-1_mt-on_MTS_softseg.nii.gz => sub-barcelona05_flip-1_mt-on_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-barcelona05/anat/{sub-barcelona05_T2star_softseg.json => sub-barcelona05_flip-2_mt-off_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-barcelona05/anat/{sub-barcelona05_flip-2_mt-off_MTS_softseg.nii.gz => sub-barcelona05_flip-2_mt-off_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-barcelona05/anat/{sub-barcelona05_T2w_softseg.json => sub-barcelona05_space-other_T1w_softseg.json} (100%) rename derivatives/labels_softseg/sub-barcelona05/anat/{sub-barcelona05_T1w_softseg.nii.gz => sub-barcelona05_space-other_T1w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-barcelona05/anat/{sub-barcelona05_flip-1_mt-on_MTS_softseg.json => sub-barcelona05_space-other_T2star_softseg.json} (100%) rename derivatives/labels_softseg/sub-barcelona05/anat/{sub-barcelona05_T2star_softseg.nii.gz => sub-barcelona05_space-other_T2star_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-barcelona05/anat/{sub-barcelona05_flip-2_mt-off_MTS_softseg.json => sub-barcelona05_space-other_T2w_softseg.json} (100%) rename derivatives/labels_softseg/sub-barcelona05/anat/{sub-barcelona05_T2w_softseg.nii.gz => sub-barcelona05_space-other_T2w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-barcelona06/anat/{sub-barcelona06_T1w_softseg.json => sub-barcelona06_flip-1_mt-on_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-barcelona06/anat/{sub-barcelona06_flip-1_mt-on_MTS_softseg.nii.gz => sub-barcelona06_flip-1_mt-on_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-barcelona06/anat/{sub-barcelona06_T2star_softseg.json => sub-barcelona06_flip-2_mt-off_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-barcelona06/anat/{sub-barcelona06_flip-2_mt-off_MTS_softseg.nii.gz => sub-barcelona06_flip-2_mt-off_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-barcelona06/anat/{sub-barcelona06_T2w_softseg.json => sub-barcelona06_space-other_T1w_softseg.json} (100%) rename derivatives/labels_softseg/sub-barcelona06/anat/{sub-barcelona06_T1w_softseg.nii.gz => sub-barcelona06_space-other_T1w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-barcelona06/anat/{sub-barcelona06_flip-1_mt-on_MTS_softseg.json => sub-barcelona06_space-other_T2star_softseg.json} (100%) rename derivatives/labels_softseg/sub-barcelona06/anat/{sub-barcelona06_T2star_softseg.nii.gz => sub-barcelona06_space-other_T2star_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-barcelona06/anat/{sub-barcelona06_flip-2_mt-off_MTS_softseg.json => sub-barcelona06_space-other_T2w_softseg.json} (100%) rename derivatives/labels_softseg/sub-barcelona06/anat/{sub-barcelona06_T2w_softseg.nii.gz => sub-barcelona06_space-other_T2w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-beijingGE01/anat/{sub-beijingGE01_T1w_softseg.json => sub-beijingGE01_space-other_T1w_softseg.json} (100%) rename derivatives/labels_softseg/sub-beijingGE01/anat/{sub-beijingGE01_T1w_softseg.nii.gz => sub-beijingGE01_space-other_T1w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-beijingGE01/anat/{sub-beijingGE01_T2star_softseg.json => sub-beijingGE01_space-other_T2star_softseg.json} (100%) rename derivatives/labels_softseg/sub-beijingGE01/anat/{sub-beijingGE01_T2star_softseg.nii.gz => sub-beijingGE01_space-other_T2star_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-beijingGE01/anat/{sub-beijingGE01_T2w_softseg.json => sub-beijingGE01_space-other_T2w_softseg.json} (100%) rename derivatives/labels_softseg/sub-beijingGE01/anat/{sub-beijingGE01_T2w_softseg.nii.gz => sub-beijingGE01_space-other_T2w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-beijingGE02/anat/{sub-beijingGE02_T1w_softseg.json => sub-beijingGE02_space-other_T1w_softseg.json} (100%) rename derivatives/labels_softseg/sub-beijingGE02/anat/{sub-beijingGE02_T1w_softseg.nii.gz => sub-beijingGE02_space-other_T1w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-beijingGE02/anat/{sub-beijingGE02_T2star_softseg.json => sub-beijingGE02_space-other_T2star_softseg.json} (100%) rename derivatives/labels_softseg/sub-beijingGE02/anat/{sub-beijingGE02_T2star_softseg.nii.gz => sub-beijingGE02_space-other_T2star_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-beijingGE02/anat/{sub-beijingGE02_T2w_softseg.json => sub-beijingGE02_space-other_T2w_softseg.json} (100%) rename derivatives/labels_softseg/sub-beijingGE02/anat/{sub-beijingGE02_T2w_softseg.nii.gz => sub-beijingGE02_space-other_T2w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-beijingGE03/anat/{sub-beijingGE03_T1w_softseg.json => sub-beijingGE03_space-other_T1w_softseg.json} (100%) rename derivatives/labels_softseg/sub-beijingGE03/anat/{sub-beijingGE03_T1w_softseg.nii.gz => sub-beijingGE03_space-other_T1w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-beijingGE03/anat/{sub-beijingGE03_T2star_softseg.json => sub-beijingGE03_space-other_T2star_softseg.json} (100%) rename derivatives/labels_softseg/sub-beijingGE03/anat/{sub-beijingGE03_T2star_softseg.nii.gz => sub-beijingGE03_space-other_T2star_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-beijingGE03/anat/{sub-beijingGE03_T2w_softseg.json => sub-beijingGE03_space-other_T2w_softseg.json} (100%) rename derivatives/labels_softseg/sub-beijingGE03/anat/{sub-beijingGE03_T2w_softseg.nii.gz => sub-beijingGE03_space-other_T2w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-beijingGE04/anat/{sub-beijingGE04_T1w_softseg.json => sub-beijingGE04_space-other_T1w_softseg.json} (100%) rename derivatives/labels_softseg/sub-beijingGE04/anat/{sub-beijingGE04_T1w_softseg.nii.gz => sub-beijingGE04_space-other_T1w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-beijingGE04/anat/{sub-beijingGE04_T2star_softseg.json => sub-beijingGE04_space-other_T2star_softseg.json} (100%) rename derivatives/labels_softseg/sub-beijingGE04/anat/{sub-beijingGE04_T2star_softseg.nii.gz => sub-beijingGE04_space-other_T2star_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-beijingGE04/anat/{sub-beijingGE04_T2w_softseg.json => sub-beijingGE04_space-other_T2w_softseg.json} (100%) rename derivatives/labels_softseg/sub-beijingGE04/anat/{sub-beijingGE04_T2w_softseg.nii.gz => sub-beijingGE04_space-other_T2w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-beijingPrisma01/anat/{sub-beijingPrisma01_T1w_softseg.json => sub-beijingPrisma01_flip-1_mt-on_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-beijingPrisma01/anat/{sub-beijingPrisma01_flip-1_mt-on_MTS_softseg.nii.gz => sub-beijingPrisma01_flip-1_mt-on_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-beijingPrisma01/anat/{sub-beijingPrisma01_T2star_softseg.json => sub-beijingPrisma01_flip-2_mt-off_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-beijingPrisma01/anat/{sub-beijingPrisma01_flip-2_mt-off_MTS_softseg.nii.gz => sub-beijingPrisma01_flip-2_mt-off_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-beijingPrisma01/anat/{sub-beijingPrisma01_T2w_softseg.json => sub-beijingPrisma01_space-other_T1w_softseg.json} (100%) rename derivatives/labels_softseg/sub-beijingPrisma01/anat/{sub-beijingPrisma01_T1w_softseg.nii.gz => sub-beijingPrisma01_space-other_T1w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-beijingPrisma01/anat/{sub-beijingPrisma01_flip-1_mt-on_MTS_softseg.json => sub-beijingPrisma01_space-other_T2star_softseg.json} (100%) rename derivatives/labels_softseg/sub-beijingPrisma01/anat/{sub-beijingPrisma01_T2star_softseg.nii.gz => sub-beijingPrisma01_space-other_T2star_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-beijingPrisma01/anat/{sub-beijingPrisma01_flip-2_mt-off_MTS_softseg.json => sub-beijingPrisma01_space-other_T2w_softseg.json} (100%) rename derivatives/labels_softseg/sub-beijingPrisma01/anat/{sub-beijingPrisma01_T2w_softseg.nii.gz => sub-beijingPrisma01_space-other_T2w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-beijingPrisma02/anat/{sub-beijingPrisma02_T1w_softseg.json => sub-beijingPrisma02_flip-1_mt-on_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-beijingPrisma02/anat/{sub-beijingPrisma02_flip-1_mt-on_MTS_softseg.nii.gz => sub-beijingPrisma02_flip-1_mt-on_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-beijingPrisma02/anat/{sub-beijingPrisma02_T2star_softseg.json => sub-beijingPrisma02_flip-2_mt-off_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-beijingPrisma02/anat/{sub-beijingPrisma02_flip-2_mt-off_MTS_softseg.nii.gz => sub-beijingPrisma02_flip-2_mt-off_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-beijingPrisma02/anat/{sub-beijingPrisma02_T2w_softseg.json => sub-beijingPrisma02_space-other_T1w_softseg.json} (100%) rename derivatives/labels_softseg/sub-beijingPrisma02/anat/{sub-beijingPrisma02_T1w_softseg.nii.gz => sub-beijingPrisma02_space-other_T1w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-beijingPrisma02/anat/{sub-beijingPrisma02_flip-1_mt-on_MTS_softseg.json => sub-beijingPrisma02_space-other_T2star_softseg.json} (100%) rename derivatives/labels_softseg/sub-beijingPrisma02/anat/{sub-beijingPrisma02_T2star_softseg.nii.gz => sub-beijingPrisma02_space-other_T2star_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-beijingPrisma02/anat/{sub-beijingPrisma02_flip-2_mt-off_MTS_softseg.json => sub-beijingPrisma02_space-other_T2w_softseg.json} (100%) rename derivatives/labels_softseg/sub-beijingPrisma02/anat/{sub-beijingPrisma02_T2w_softseg.nii.gz => sub-beijingPrisma02_space-other_T2w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-beijingPrisma03/anat/{sub-beijingPrisma03_T1w_softseg.json => sub-beijingPrisma03_flip-1_mt-on_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-beijingPrisma03/anat/{sub-beijingPrisma03_flip-1_mt-on_MTS_softseg.nii.gz => sub-beijingPrisma03_flip-1_mt-on_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-beijingPrisma03/anat/{sub-beijingPrisma03_T2star_softseg.json => sub-beijingPrisma03_flip-2_mt-off_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-beijingPrisma03/anat/{sub-beijingPrisma03_flip-2_mt-off_MTS_softseg.nii.gz => sub-beijingPrisma03_flip-2_mt-off_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-beijingPrisma03/anat/{sub-beijingPrisma03_T2w_softseg.json => sub-beijingPrisma03_space-other_T1w_softseg.json} (100%) rename derivatives/labels_softseg/sub-beijingPrisma03/anat/{sub-beijingPrisma03_T1w_softseg.nii.gz => sub-beijingPrisma03_space-other_T1w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-beijingPrisma03/anat/{sub-beijingPrisma03_flip-1_mt-on_MTS_softseg.json => sub-beijingPrisma03_space-other_T2star_softseg.json} (100%) rename derivatives/labels_softseg/sub-beijingPrisma03/anat/{sub-beijingPrisma03_T2star_softseg.nii.gz => sub-beijingPrisma03_space-other_T2star_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-beijingPrisma03/anat/{sub-beijingPrisma03_flip-2_mt-off_MTS_softseg.json => sub-beijingPrisma03_space-other_T2w_softseg.json} (100%) rename derivatives/labels_softseg/sub-beijingPrisma03/anat/{sub-beijingPrisma03_T2w_softseg.nii.gz => sub-beijingPrisma03_space-other_T2w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-beijingPrisma04/anat/{sub-beijingPrisma04_T1w_softseg.json => sub-beijingPrisma04_flip-1_mt-on_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-beijingPrisma04/anat/{sub-beijingPrisma04_flip-1_mt-on_MTS_softseg.nii.gz => sub-beijingPrisma04_flip-1_mt-on_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-beijingPrisma04/anat/{sub-beijingPrisma04_T2star_softseg.json => sub-beijingPrisma04_flip-2_mt-off_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-beijingPrisma04/anat/{sub-beijingPrisma04_flip-2_mt-off_MTS_softseg.nii.gz => sub-beijingPrisma04_flip-2_mt-off_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-beijingPrisma04/anat/{sub-beijingPrisma04_T2w_softseg.json => sub-beijingPrisma04_space-other_T1w_softseg.json} (100%) rename derivatives/labels_softseg/sub-beijingPrisma04/anat/{sub-beijingPrisma04_T1w_softseg.nii.gz => sub-beijingPrisma04_space-other_T1w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-beijingPrisma04/anat/{sub-beijingPrisma04_flip-1_mt-on_MTS_softseg.json => sub-beijingPrisma04_space-other_T2star_softseg.json} (100%) rename derivatives/labels_softseg/sub-beijingPrisma04/anat/{sub-beijingPrisma04_T2star_softseg.nii.gz => sub-beijingPrisma04_space-other_T2star_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-beijingPrisma04/anat/{sub-beijingPrisma04_flip-2_mt-off_MTS_softseg.json => sub-beijingPrisma04_space-other_T2w_softseg.json} (100%) rename derivatives/labels_softseg/sub-beijingPrisma04/anat/{sub-beijingPrisma04_T2w_softseg.nii.gz => sub-beijingPrisma04_space-other_T2w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-beijingPrisma05/anat/{sub-beijingPrisma05_T1w_softseg.json => sub-beijingPrisma05_flip-1_mt-on_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-beijingPrisma05/anat/{sub-beijingPrisma05_flip-1_mt-on_MTS_softseg.nii.gz => sub-beijingPrisma05_flip-1_mt-on_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-beijingPrisma05/anat/{sub-beijingPrisma05_T2star_softseg.json => sub-beijingPrisma05_flip-2_mt-off_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-beijingPrisma05/anat/{sub-beijingPrisma05_flip-2_mt-off_MTS_softseg.nii.gz => sub-beijingPrisma05_flip-2_mt-off_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-beijingPrisma05/anat/{sub-beijingPrisma05_T2w_softseg.json => sub-beijingPrisma05_space-other_T1w_softseg.json} (100%) rename derivatives/labels_softseg/sub-beijingPrisma05/anat/{sub-beijingPrisma05_T1w_softseg.nii.gz => sub-beijingPrisma05_space-other_T1w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-beijingPrisma05/anat/{sub-beijingPrisma05_flip-1_mt-on_MTS_softseg.json => sub-beijingPrisma05_space-other_T2star_softseg.json} (100%) rename derivatives/labels_softseg/sub-beijingPrisma05/anat/{sub-beijingPrisma05_T2star_softseg.nii.gz => sub-beijingPrisma05_space-other_T2star_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-beijingPrisma05/anat/{sub-beijingPrisma05_flip-2_mt-off_MTS_softseg.json => sub-beijingPrisma05_space-other_T2w_softseg.json} (100%) rename derivatives/labels_softseg/sub-beijingPrisma05/anat/{sub-beijingPrisma05_T2w_softseg.nii.gz => sub-beijingPrisma05_space-other_T2w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-beijingVerio01/anat/{sub-beijingVerio01_T1w_softseg.json => sub-beijingVerio01_space-other_T1w_softseg.json} (100%) rename derivatives/labels_softseg/sub-beijingVerio01/anat/{sub-beijingVerio01_T1w_softseg.nii.gz => sub-beijingVerio01_space-other_T1w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-beijingVerio01/anat/{sub-beijingVerio01_T2star_softseg.json => sub-beijingVerio01_space-other_T2star_softseg.json} (100%) rename derivatives/labels_softseg/sub-beijingVerio01/anat/{sub-beijingVerio01_T2star_softseg.nii.gz => sub-beijingVerio01_space-other_T2star_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-beijingVerio01/anat/{sub-beijingVerio01_T2w_softseg.json => sub-beijingVerio01_space-other_T2w_softseg.json} (100%) rename derivatives/labels_softseg/sub-beijingVerio01/anat/{sub-beijingVerio01_T2w_softseg.nii.gz => sub-beijingVerio01_space-other_T2w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-beijingVerio02/anat/{sub-beijingVerio02_T1w_softseg.json => sub-beijingVerio02_space-other_T1w_softseg.json} (100%) rename derivatives/labels_softseg/sub-beijingVerio02/anat/{sub-beijingVerio02_T1w_softseg.nii.gz => sub-beijingVerio02_space-other_T1w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-beijingVerio02/anat/{sub-beijingVerio02_T2star_softseg.json => sub-beijingVerio02_space-other_T2star_softseg.json} (100%) rename derivatives/labels_softseg/sub-beijingVerio02/anat/{sub-beijingVerio02_T2star_softseg.nii.gz => sub-beijingVerio02_space-other_T2star_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-beijingVerio02/anat/{sub-beijingVerio02_T2w_softseg.json => sub-beijingVerio02_space-other_T2w_softseg.json} (100%) rename derivatives/labels_softseg/sub-beijingVerio02/anat/{sub-beijingVerio02_T2w_softseg.nii.gz => sub-beijingVerio02_space-other_T2w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-beijingVerio03/anat/{sub-beijingVerio03_T1w_softseg.json => sub-beijingVerio03_space-other_T1w_softseg.json} (100%) rename derivatives/labels_softseg/sub-beijingVerio03/anat/{sub-beijingVerio03_T1w_softseg.nii.gz => sub-beijingVerio03_space-other_T1w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-beijingVerio03/anat/{sub-beijingVerio03_T2star_softseg.json => sub-beijingVerio03_space-other_T2star_softseg.json} (100%) rename derivatives/labels_softseg/sub-beijingVerio03/anat/{sub-beijingVerio03_T2star_softseg.nii.gz => sub-beijingVerio03_space-other_T2star_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-beijingVerio03/anat/{sub-beijingVerio03_T2w_softseg.json => sub-beijingVerio03_space-other_T2w_softseg.json} (100%) rename derivatives/labels_softseg/sub-beijingVerio03/anat/{sub-beijingVerio03_T2w_softseg.nii.gz => sub-beijingVerio03_space-other_T2w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-beijingVerio04/anat/{sub-beijingVerio04_T1w_softseg.json => sub-beijingVerio04_space-other_T1w_softseg.json} (100%) rename derivatives/labels_softseg/sub-beijingVerio04/anat/{sub-beijingVerio04_T1w_softseg.nii.gz => sub-beijingVerio04_space-other_T1w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-beijingVerio04/anat/{sub-beijingVerio04_T2star_softseg.json => sub-beijingVerio04_space-other_T2star_softseg.json} (100%) rename derivatives/labels_softseg/sub-beijingVerio04/anat/{sub-beijingVerio04_T2star_softseg.nii.gz => sub-beijingVerio04_space-other_T2star_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-beijingVerio04/anat/{sub-beijingVerio04_T2w_softseg.json => sub-beijingVerio04_space-other_T2w_softseg.json} (100%) rename derivatives/labels_softseg/sub-beijingVerio04/anat/{sub-beijingVerio04_T2w_softseg.nii.gz => sub-beijingVerio04_space-other_T2w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-brnoCeitec01/anat/{sub-brnoCeitec01_T1w_softseg.json => sub-brnoCeitec01_flip-1_mt-on_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-brnoCeitec01/anat/{sub-brnoCeitec01_flip-1_mt-on_MTS_softseg.nii.gz => sub-brnoCeitec01_flip-1_mt-on_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-brnoCeitec01/anat/{sub-brnoCeitec01_T2star_softseg.json => sub-brnoCeitec01_flip-2_mt-off_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-brnoCeitec01/anat/{sub-brnoCeitec01_flip-2_mt-off_MTS_softseg.nii.gz => sub-brnoCeitec01_flip-2_mt-off_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-brnoCeitec01/anat/{sub-brnoCeitec01_T1w.json => sub-brnoCeitec01_space-other_T1w.json} (100%) rename derivatives/labels_softseg/sub-brnoCeitec01/anat/{sub-brnoCeitec01_T1w.nii.gz => sub-brnoCeitec01_space-other_T1w.nii.gz} (100%) rename derivatives/labels_softseg/sub-brnoCeitec01/anat/{sub-brnoCeitec01_T2w_softseg.json => sub-brnoCeitec01_space-other_T1w_softseg.json} (100%) rename derivatives/labels_softseg/sub-brnoCeitec01/anat/{sub-brnoCeitec01_T1w_softseg.nii.gz => sub-brnoCeitec01_space-other_T1w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-brnoCeitec01/anat/{sub-brnoCeitec01_flip-1_mt-on_MTS_softseg.json => sub-brnoCeitec01_space-other_T2star_softseg.json} (100%) rename derivatives/labels_softseg/sub-brnoCeitec01/anat/{sub-brnoCeitec01_T2star_softseg.nii.gz => sub-brnoCeitec01_space-other_T2star_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-brnoCeitec01/anat/{sub-brnoCeitec01_flip-2_mt-off_MTS_softseg.json => sub-brnoCeitec01_space-other_T2w_softseg.json} (100%) rename derivatives/labels_softseg/sub-brnoCeitec01/anat/{sub-brnoCeitec01_T2w_softseg.nii.gz => sub-brnoCeitec01_space-other_T2w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-brnoCeitec02/anat/{sub-brnoCeitec02_T1w_softseg.json => sub-brnoCeitec02_flip-1_mt-on_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-brnoCeitec02/anat/{sub-brnoCeitec02_flip-1_mt-on_MTS_softseg.nii.gz => sub-brnoCeitec02_flip-1_mt-on_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-brnoCeitec02/anat/{sub-brnoCeitec02_flip-1_mt-on_MTS_softseg.json => sub-brnoCeitec02_flip-2_mt-off_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-brnoCeitec02/anat/{sub-brnoCeitec02_flip-2_mt-off_MTS_softseg.nii.gz => sub-brnoCeitec02_flip-2_mt-off_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-brnoCeitec02/anat/{sub-brnoCeitec02_flip-2_mt-off_MTS_softseg.json => sub-brnoCeitec02_space-other_T1w_softseg.json} (100%) rename derivatives/labels_softseg/sub-brnoCeitec02/anat/{sub-brnoCeitec02_T1w_softseg.nii.gz => sub-brnoCeitec02_space-other_T1w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-brnoCeitec02/anat/{sub-brnoCeitec02_T2star_softseg.json => sub-brnoCeitec02_space-other_T2star_softseg.json} (100%) rename derivatives/labels_softseg/sub-brnoCeitec02/anat/{sub-brnoCeitec02_T2star_softseg.nii.gz => sub-brnoCeitec02_space-other_T2star_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-brnoCeitec02/anat/{sub-brnoCeitec02_T2w_softseg.json => sub-brnoCeitec02_space-other_T2w_softseg.json} (100%) rename derivatives/labels_softseg/sub-brnoCeitec02/anat/{sub-brnoCeitec02_T2w_softseg.nii.gz => sub-brnoCeitec02_space-other_T2w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-brnoCeitec03/anat/{sub-brnoCeitec03_T1w_softseg.json => sub-brnoCeitec03_flip-1_mt-on_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-brnoCeitec03/anat/{sub-brnoCeitec03_flip-1_mt-on_MTS_softseg.nii.gz => sub-brnoCeitec03_flip-1_mt-on_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-brnoCeitec03/anat/{sub-brnoCeitec03_T2star_softseg.json => sub-brnoCeitec03_flip-2_mt-off_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-brnoCeitec03/anat/{sub-brnoCeitec03_flip-2_mt-off_MTS_softseg.nii.gz => sub-brnoCeitec03_flip-2_mt-off_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-brnoCeitec03/anat/{sub-brnoCeitec03_T2w_softseg.json => sub-brnoCeitec03_space-other_T1w_softseg.json} (100%) rename derivatives/labels_softseg/sub-brnoCeitec03/anat/{sub-brnoCeitec03_T1w_softseg.nii.gz => sub-brnoCeitec03_space-other_T1w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-brnoCeitec03/anat/{sub-brnoCeitec03_flip-1_mt-on_MTS_softseg.json => sub-brnoCeitec03_space-other_T2star_softseg.json} (100%) rename derivatives/labels_softseg/sub-brnoCeitec03/anat/{sub-brnoCeitec03_T2star_softseg.nii.gz => sub-brnoCeitec03_space-other_T2star_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-brnoCeitec03/anat/{sub-brnoCeitec03_flip-2_mt-off_MTS_softseg.json => sub-brnoCeitec03_space-other_T2w_softseg.json} (100%) rename derivatives/labels_softseg/sub-brnoCeitec03/anat/{sub-brnoCeitec03_T2w_softseg.nii.gz => sub-brnoCeitec03_space-other_T2w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-brnoCeitec04/anat/{sub-brnoCeitec04_T1w_softseg.json => sub-brnoCeitec04_flip-1_mt-on_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-brnoCeitec04/anat/{sub-brnoCeitec04_flip-1_mt-on_MTS_softseg.nii.gz => sub-brnoCeitec04_flip-1_mt-on_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-brnoCeitec04/anat/{sub-brnoCeitec04_T2star_softseg.json => sub-brnoCeitec04_flip-2_mt-off_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-brnoCeitec04/anat/{sub-brnoCeitec04_flip-2_mt-off_MTS_softseg.nii.gz => sub-brnoCeitec04_flip-2_mt-off_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-brnoCeitec04/anat/{sub-brnoCeitec04_T2w_softseg.json => sub-brnoCeitec04_space-other_T1w_softseg.json} (100%) rename derivatives/labels_softseg/sub-brnoCeitec04/anat/{sub-brnoCeitec04_T1w_softseg.nii.gz => sub-brnoCeitec04_space-other_T1w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-brnoCeitec04/anat/{sub-brnoCeitec04_flip-1_mt-on_MTS_softseg.json => sub-brnoCeitec04_space-other_T2star_softseg.json} (100%) rename derivatives/labels_softseg/sub-brnoCeitec04/anat/{sub-brnoCeitec04_T2star_softseg.nii.gz => sub-brnoCeitec04_space-other_T2star_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-brnoCeitec04/anat/{sub-brnoCeitec04_flip-2_mt-off_MTS_softseg.json => sub-brnoCeitec04_space-other_T2w_softseg.json} (100%) rename derivatives/labels_softseg/sub-brnoCeitec04/anat/{sub-brnoCeitec04_T2w_softseg.nii.gz => sub-brnoCeitec04_space-other_T2w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-brnoCeitec05/anat/{sub-brnoCeitec05_T1w_softseg.json => sub-brnoCeitec05_flip-1_mt-on_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-brnoCeitec05/anat/{sub-brnoCeitec05_flip-1_mt-on_MTS_softseg.nii.gz => sub-brnoCeitec05_flip-1_mt-on_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-brnoCeitec05/anat/{sub-brnoCeitec05_T2star_softseg.json => sub-brnoCeitec05_flip-2_mt-off_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-brnoCeitec05/anat/{sub-brnoCeitec05_flip-2_mt-off_MTS_softseg.nii.gz => sub-brnoCeitec05_flip-2_mt-off_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-brnoCeitec05/anat/{sub-brnoCeitec05_T2w_softseg.json => sub-brnoCeitec05_space-other_T1w_softseg.json} (100%) rename derivatives/labels_softseg/sub-brnoCeitec05/anat/{sub-brnoCeitec05_T1w_softseg.nii.gz => sub-brnoCeitec05_space-other_T1w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-brnoCeitec05/anat/{sub-brnoCeitec05_flip-1_mt-on_MTS_softseg.json => sub-brnoCeitec05_space-other_T2star_softseg.json} (100%) rename derivatives/labels_softseg/sub-brnoCeitec05/anat/{sub-brnoCeitec05_T2star_softseg.nii.gz => sub-brnoCeitec05_space-other_T2star_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-brnoCeitec05/anat/{sub-brnoCeitec05_flip-2_mt-off_MTS_softseg.json => sub-brnoCeitec05_space-other_T2w_softseg.json} (100%) rename derivatives/labels_softseg/sub-brnoCeitec05/anat/{sub-brnoCeitec05_T2w_softseg.nii.gz => sub-brnoCeitec05_space-other_T2w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-brnoCeitec06/anat/{sub-brnoCeitec06_T1w_softseg.json => sub-brnoCeitec06_flip-1_mt-on_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-brnoCeitec06/anat/{sub-brnoCeitec06_flip-1_mt-on_MTS_softseg.nii.gz => sub-brnoCeitec06_flip-1_mt-on_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-brnoCeitec06/anat/{sub-brnoCeitec06_T2star_softseg.json => sub-brnoCeitec06_flip-2_mt-off_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-brnoCeitec06/anat/{sub-brnoCeitec06_flip-2_mt-off_MTS_softseg.nii.gz => sub-brnoCeitec06_flip-2_mt-off_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-brnoCeitec06/anat/{sub-brnoCeitec06_T2w_softseg.json => sub-brnoCeitec06_space-other_T1w_softseg.json} (100%) rename derivatives/labels_softseg/sub-brnoCeitec06/anat/{sub-brnoCeitec06_T1w_softseg.nii.gz => sub-brnoCeitec06_space-other_T1w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-brnoCeitec06/anat/{sub-brnoCeitec06_flip-1_mt-on_MTS_softseg.json => sub-brnoCeitec06_space-other_T2star_softseg.json} (100%) rename derivatives/labels_softseg/sub-brnoCeitec06/anat/{sub-brnoCeitec06_T2star_softseg.nii.gz => sub-brnoCeitec06_space-other_T2star_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-brnoCeitec06/anat/{sub-brnoCeitec06_flip-2_mt-off_MTS_softseg.json => sub-brnoCeitec06_space-other_T2w_softseg.json} (100%) rename derivatives/labels_softseg/sub-brnoCeitec06/anat/{sub-brnoCeitec06_T2w_softseg.nii.gz => sub-brnoCeitec06_space-other_T2w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-brnoUhb01/anat/{sub-brnoUhb01_T1w_softseg.json => sub-brnoUhb01_flip-1_mt-on_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-brnoUhb01/anat/{sub-brnoUhb01_flip-1_mt-on_MTS_softseg.nii.gz => sub-brnoUhb01_flip-1_mt-on_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-brnoUhb01/anat/{sub-brnoUhb01_T2star_softseg.json => sub-brnoUhb01_flip-2_mt-off_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-brnoUhb01/anat/{sub-brnoUhb01_flip-2_mt-off_MTS_softseg.nii.gz => sub-brnoUhb01_flip-2_mt-off_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-brnoUhb01/anat/{sub-brnoUhb01_T2w_softseg.json => sub-brnoUhb01_space-other_T1w_softseg.json} (100%) rename derivatives/labels_softseg/sub-brnoUhb01/anat/{sub-brnoUhb01_T1w_softseg.nii.gz => sub-brnoUhb01_space-other_T1w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-brnoUhb01/anat/{sub-brnoUhb01_flip-1_mt-on_MTS_softseg.json => sub-brnoUhb01_space-other_T2star_softseg.json} (100%) rename derivatives/labels_softseg/sub-brnoUhb01/anat/{sub-brnoUhb01_T2star_softseg.nii.gz => sub-brnoUhb01_space-other_T2star_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-brnoUhb01/anat/{sub-brnoUhb01_flip-2_mt-off_MTS_softseg.json => sub-brnoUhb01_space-other_T2w_softseg.json} (100%) rename derivatives/labels_softseg/sub-brnoUhb01/anat/{sub-brnoUhb01_T2w_softseg.nii.gz => sub-brnoUhb01_space-other_T2w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-brnoUhb04/anat/{sub-brnoUhb04_T1w_softseg.json => sub-brnoUhb04_flip-1_mt-on_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-brnoUhb04/anat/{sub-brnoUhb04_flip-1_mt-on_MTS_softseg.nii.gz => sub-brnoUhb04_flip-1_mt-on_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-brnoUhb04/anat/{sub-brnoUhb04_T2star_softseg.json => sub-brnoUhb04_flip-2_mt-off_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-brnoUhb04/anat/{sub-brnoUhb04_flip-2_mt-off_MTS_softseg.nii.gz => sub-brnoUhb04_flip-2_mt-off_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-brnoUhb04/anat/{sub-brnoUhb04_T2w_softseg.json => sub-brnoUhb04_space-other_T1w_softseg.json} (100%) rename derivatives/labels_softseg/sub-brnoUhb04/anat/{sub-brnoUhb04_T1w_softseg.nii.gz => sub-brnoUhb04_space-other_T1w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-brnoUhb04/anat/{sub-brnoUhb04_flip-1_mt-on_MTS_softseg.json => sub-brnoUhb04_space-other_T2star_softseg.json} (100%) rename derivatives/labels_softseg/sub-brnoUhb04/anat/{sub-brnoUhb04_T2star_softseg.nii.gz => sub-brnoUhb04_space-other_T2star_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-brnoUhb04/anat/{sub-brnoUhb04_flip-2_mt-off_MTS_softseg.json => sub-brnoUhb04_space-other_T2w_softseg.json} (100%) rename derivatives/labels_softseg/sub-brnoUhb04/anat/{sub-brnoUhb04_T2w_softseg.nii.gz => sub-brnoUhb04_space-other_T2w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-brnoUhb05/anat/{sub-brnoUhb05_T1w_softseg.json => sub-brnoUhb05_flip-1_mt-on_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-brnoUhb05/anat/{sub-brnoUhb05_flip-1_mt-on_MTS_softseg.nii.gz => sub-brnoUhb05_flip-1_mt-on_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-brnoUhb05/anat/{sub-brnoUhb05_T2star_softseg.json => sub-brnoUhb05_flip-2_mt-off_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-brnoUhb05/anat/{sub-brnoUhb05_flip-2_mt-off_MTS_softseg.nii.gz => sub-brnoUhb05_flip-2_mt-off_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-brnoUhb05/anat/{sub-brnoUhb05_T2w_softseg.json => sub-brnoUhb05_space-other_T1w_softseg.json} (100%) rename derivatives/labels_softseg/sub-brnoUhb05/anat/{sub-brnoUhb05_T1w_softseg.nii.gz => sub-brnoUhb05_space-other_T1w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-brnoUhb05/anat/{sub-brnoUhb05_flip-1_mt-on_MTS_softseg.json => sub-brnoUhb05_space-other_T2star_softseg.json} (100%) rename derivatives/labels_softseg/sub-brnoUhb05/anat/{sub-brnoUhb05_T2star_softseg.nii.gz => sub-brnoUhb05_space-other_T2star_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-brnoUhb05/anat/{sub-brnoUhb05_flip-2_mt-off_MTS_softseg.json => sub-brnoUhb05_space-other_T2w_softseg.json} (100%) rename derivatives/labels_softseg/sub-brnoUhb05/anat/{sub-brnoUhb05_T2w_softseg.nii.gz => sub-brnoUhb05_space-other_T2w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-brnoUhb06/anat/{sub-brnoUhb06_T1w_softseg.json => sub-brnoUhb06_flip-1_mt-on_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-brnoUhb06/anat/{sub-brnoUhb06_flip-1_mt-on_MTS_softseg.nii.gz => sub-brnoUhb06_flip-1_mt-on_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-brnoUhb06/anat/{sub-brnoUhb06_T2star_softseg.json => sub-brnoUhb06_flip-2_mt-off_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-brnoUhb06/anat/{sub-brnoUhb06_flip-2_mt-off_MTS_softseg.nii.gz => sub-brnoUhb06_flip-2_mt-off_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-brnoUhb06/anat/{sub-brnoUhb06_T2w_softseg.json => sub-brnoUhb06_space-other_T1w_softseg.json} (100%) rename derivatives/labels_softseg/sub-brnoUhb06/anat/{sub-brnoUhb06_T1w_softseg.nii.gz => sub-brnoUhb06_space-other_T1w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-brnoUhb06/anat/{sub-brnoUhb06_flip-1_mt-on_MTS_softseg.json => sub-brnoUhb06_space-other_T2star_softseg.json} (100%) rename derivatives/labels_softseg/sub-brnoUhb06/anat/{sub-brnoUhb06_T2star_softseg.nii.gz => sub-brnoUhb06_space-other_T2star_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-brnoUhb06/anat/{sub-brnoUhb06_flip-2_mt-off_MTS_softseg.json => sub-brnoUhb06_space-other_T2w_softseg.json} (100%) rename derivatives/labels_softseg/sub-brnoUhb06/anat/{sub-brnoUhb06_T2w_softseg.nii.gz => sub-brnoUhb06_space-other_T2w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-cardiff01/anat/{sub-cardiff01_T1w_softseg.json => sub-cardiff01_flip-1_mt-on_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-cardiff01/anat/{sub-cardiff01_flip-1_mt-on_MTS_softseg.nii.gz => sub-cardiff01_flip-1_mt-on_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-cardiff01/anat/{sub-cardiff01_T2star_softseg.json => sub-cardiff01_flip-2_mt-off_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-cardiff01/anat/{sub-cardiff01_flip-2_mt-off_MTS_softseg.nii.gz => sub-cardiff01_flip-2_mt-off_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-cardiff01/anat/{sub-cardiff01_T2w_softseg.json => sub-cardiff01_space-other_T1w_softseg.json} (100%) rename derivatives/labels_softseg/sub-cardiff01/anat/{sub-cardiff01_T1w_softseg.nii.gz => sub-cardiff01_space-other_T1w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-cardiff01/anat/{sub-cardiff01_flip-1_mt-on_MTS_softseg.json => sub-cardiff01_space-other_T2star_softseg.json} (100%) rename derivatives/labels_softseg/sub-cardiff01/anat/{sub-cardiff01_T2star_softseg.nii.gz => sub-cardiff01_space-other_T2star_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-cardiff01/anat/{sub-cardiff01_flip-2_mt-off_MTS_softseg.json => sub-cardiff01_space-other_T2w_softseg.json} (100%) rename derivatives/labels_softseg/sub-cardiff01/anat/{sub-cardiff01_T2w_softseg.nii.gz => sub-cardiff01_space-other_T2w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-cardiff02/anat/{sub-cardiff02_T1w_softseg.json => sub-cardiff02_flip-1_mt-on_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-cardiff02/anat/{sub-cardiff02_flip-1_mt-on_MTS_softseg.nii.gz => sub-cardiff02_flip-1_mt-on_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-cardiff02/anat/{sub-cardiff02_T2star_softseg.json => sub-cardiff02_flip-2_mt-off_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-cardiff02/anat/{sub-cardiff02_flip-2_mt-off_MTS_softseg.nii.gz => sub-cardiff02_flip-2_mt-off_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-cardiff02/anat/{sub-cardiff02_T2w_softseg.json => sub-cardiff02_space-other_T1w_softseg.json} (100%) rename derivatives/labels_softseg/sub-cardiff02/anat/{sub-cardiff02_T1w_softseg.nii.gz => sub-cardiff02_space-other_T1w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-cardiff02/anat/{sub-cardiff02_flip-1_mt-on_MTS_softseg.json => sub-cardiff02_space-other_T2star_softseg.json} (100%) rename derivatives/labels_softseg/sub-cardiff02/anat/{sub-cardiff02_T2star_softseg.nii.gz => sub-cardiff02_space-other_T2star_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-cardiff02/anat/{sub-cardiff02_flip-2_mt-off_MTS_softseg.json => sub-cardiff02_space-other_T2w_softseg.json} (100%) rename derivatives/labels_softseg/sub-cardiff02/anat/{sub-cardiff02_T2w_softseg.nii.gz => sub-cardiff02_space-other_T2w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-cardiff03/anat/{sub-cardiff03_flip-1_mt-on_MTS_softseg.json => sub-cardiff03_flip-1_mt-on_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-cardiff03/anat/{sub-cardiff03_flip-1_mt-on_MTS_softseg.nii.gz => sub-cardiff03_flip-1_mt-on_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-cardiff03/anat/{sub-cardiff03_T1w_softseg.json => sub-cardiff03_flip-2_mt-off_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-cardiff03/anat/{sub-cardiff03_flip-2_mt-off_MTS_softseg.nii.gz => sub-cardiff03_flip-2_mt-off_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-cardiff03/anat/{sub-cardiff03_T2star_softseg.json => sub-cardiff03_space-other_T1w_softseg.json} (100%) rename derivatives/labels_softseg/sub-cardiff03/anat/{sub-cardiff03_T1w_softseg.nii.gz => sub-cardiff03_space-other_T1w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-cardiff03/anat/{sub-cardiff03_T2w_softseg.json => sub-cardiff03_space-other_T2star_softseg.json} (100%) rename derivatives/labels_softseg/sub-cardiff03/anat/{sub-cardiff03_T2star_softseg.nii.gz => sub-cardiff03_space-other_T2star_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-cardiff03/anat/{sub-cardiff03_flip-2_mt-off_MTS_softseg.json => sub-cardiff03_space-other_T2w_softseg.json} (100%) rename derivatives/labels_softseg/sub-cardiff03/anat/{sub-cardiff03_T2w_softseg.nii.gz => sub-cardiff03_space-other_T2w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-cardiff04/anat/{sub-cardiff04_T1w_softseg.json => sub-cardiff04_flip-1_mt-on_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-cardiff04/anat/{sub-cardiff04_flip-1_mt-on_MTS_softseg.nii.gz => sub-cardiff04_flip-1_mt-on_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-cardiff04/anat/{sub-cardiff04_T2star_softseg.json => sub-cardiff04_flip-2_mt-off_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-cardiff04/anat/{sub-cardiff04_flip-2_mt-off_MTS_softseg.nii.gz => sub-cardiff04_flip-2_mt-off_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-cardiff04/anat/{sub-cardiff04_T2w_softseg.json => sub-cardiff04_space-other_T1w_softseg.json} (100%) rename derivatives/labels_softseg/sub-cardiff04/anat/{sub-cardiff04_T1w_softseg.nii.gz => sub-cardiff04_space-other_T1w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-cardiff04/anat/{sub-cardiff04_flip-1_mt-on_MTS_softseg.json => sub-cardiff04_space-other_T2star_softseg.json} (100%) rename derivatives/labels_softseg/sub-cardiff04/anat/{sub-cardiff04_T2star_softseg.nii.gz => sub-cardiff04_space-other_T2star_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-cardiff04/anat/{sub-cardiff04_flip-2_mt-off_MTS_softseg.json => sub-cardiff04_space-other_T2w_softseg.json} (100%) rename derivatives/labels_softseg/sub-cardiff04/anat/{sub-cardiff04_T2w_softseg.nii.gz => sub-cardiff04_space-other_T2w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-cardiff05/anat/{sub-cardiff05_T1w_softseg.json => sub-cardiff05_flip-1_mt-on_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-cardiff05/anat/{sub-cardiff05_flip-1_mt-on_MTS_softseg.nii.gz => sub-cardiff05_flip-1_mt-on_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-cardiff05/anat/{sub-cardiff05_T2star_softseg.json => sub-cardiff05_flip-2_mt-off_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-cardiff05/anat/{sub-cardiff05_flip-2_mt-off_MTS_softseg.nii.gz => sub-cardiff05_flip-2_mt-off_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-cardiff05/anat/{sub-cardiff05_T2w_softseg.json => sub-cardiff05_space-other_T1w_softseg.json} (100%) rename derivatives/labels_softseg/sub-cardiff05/anat/{sub-cardiff05_T1w_softseg.nii.gz => sub-cardiff05_space-other_T1w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-cardiff05/anat/{sub-cardiff05_flip-1_mt-on_MTS_softseg.json => sub-cardiff05_space-other_T2star_softseg.json} (100%) rename derivatives/labels_softseg/sub-cardiff05/anat/{sub-cardiff05_T2star_softseg.nii.gz => sub-cardiff05_space-other_T2star_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-cardiff05/anat/{sub-cardiff05_flip-2_mt-off_MTS_softseg.json => sub-cardiff05_space-other_T2w_softseg.json} (100%) rename derivatives/labels_softseg/sub-cardiff05/anat/{sub-cardiff05_T2w_softseg.nii.gz => sub-cardiff05_space-other_T2w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-cardiff06/anat/{sub-cardiff06_T1w_softseg.json => sub-cardiff06_flip-1_mt-on_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-cardiff06/anat/{sub-cardiff06_flip-1_mt-on_MTS_softseg.nii.gz => sub-cardiff06_flip-1_mt-on_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-cardiff06/anat/{sub-cardiff06_T2star_softseg.json => sub-cardiff06_flip-2_mt-off_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-cardiff06/anat/{sub-cardiff06_flip-2_mt-off_MTS_softseg.nii.gz => sub-cardiff06_flip-2_mt-off_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-cardiff06/anat/{sub-cardiff06_T2w_softseg.json => sub-cardiff06_space-other_T1w_softseg.json} (100%) rename derivatives/labels_softseg/sub-cardiff06/anat/{sub-cardiff06_T1w_softseg.nii.gz => sub-cardiff06_space-other_T1w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-cardiff06/anat/{sub-cardiff06_flip-1_mt-on_MTS_softseg.json => sub-cardiff06_space-other_T2star_softseg.json} (100%) rename derivatives/labels_softseg/sub-cardiff06/anat/{sub-cardiff06_T2star_softseg.nii.gz => sub-cardiff06_space-other_T2star_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-cardiff06/anat/{sub-cardiff06_flip-2_mt-off_MTS_softseg.json => sub-cardiff06_space-other_T2w_softseg.json} (100%) rename derivatives/labels_softseg/sub-cardiff06/anat/{sub-cardiff06_T2w_softseg.nii.gz => sub-cardiff06_space-other_T2w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-cmrra01/anat/{sub-cmrra01_T1w_softseg.json => sub-cmrra01_flip-1_mt-on_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-cmrra01/anat/{sub-cmrra01_flip-1_mt-on_MTS_softseg.nii.gz => sub-cmrra01_flip-1_mt-on_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-cmrra01/anat/{sub-cmrra01_flip-1_mt-on_MTS_softseg.json => sub-cmrra01_flip-2_mt-off_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-cmrra01/anat/{sub-cmrra01_flip-2_mt-off_MTS_softseg.nii.gz => sub-cmrra01_flip-2_mt-off_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-cmrra01/anat/{sub-cmrra01_flip-2_mt-off_MTS_softseg.json => sub-cmrra01_space-other_T1w_softseg.json} (100%) rename derivatives/labels_softseg/sub-cmrra01/anat/{sub-cmrra01_T1w_softseg.nii.gz => sub-cmrra01_space-other_T1w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-cmrra01/anat/{sub-cmrra01_T2star_softseg.json => sub-cmrra01_space-other_T2star_softseg.json} (100%) rename derivatives/labels_softseg/sub-cmrra01/anat/{sub-cmrra01_T2star_softseg.nii.gz => sub-cmrra01_space-other_T2star_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-cmrra01/anat/{sub-cmrra01_T2w_softseg.json => sub-cmrra01_space-other_T2w_softseg.json} (100%) rename derivatives/labels_softseg/sub-cmrra01/anat/{sub-cmrra01_T2w_softseg.nii.gz => sub-cmrra01_space-other_T2w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-cmrra02/anat/{sub-cmrra02_T1w_softseg.json => sub-cmrra02_flip-1_mt-on_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-cmrra02/anat/{sub-cmrra02_flip-1_mt-on_MTS_softseg.nii.gz => sub-cmrra02_flip-1_mt-on_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-cmrra02/anat/{sub-cmrra02_T2star_softseg.json => sub-cmrra02_flip-2_mt-off_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-cmrra02/anat/{sub-cmrra02_flip-2_mt-off_MTS_softseg.nii.gz => sub-cmrra02_flip-2_mt-off_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-cmrra02/anat/{sub-cmrra02_T2w_softseg.json => sub-cmrra02_space-other_T1w_softseg.json} (100%) rename derivatives/labels_softseg/sub-cmrra02/anat/{sub-cmrra02_T1w_softseg.nii.gz => sub-cmrra02_space-other_T1w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-cmrra02/anat/{sub-cmrra02_flip-1_mt-on_MTS_softseg.json => sub-cmrra02_space-other_T2star_softseg.json} (100%) rename derivatives/labels_softseg/sub-cmrra02/anat/{sub-cmrra02_T2star_softseg.nii.gz => sub-cmrra02_space-other_T2star_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-cmrra02/anat/{sub-cmrra02_flip-2_mt-off_MTS_softseg.json => sub-cmrra02_space-other_T2w_softseg.json} (100%) rename derivatives/labels_softseg/sub-cmrra02/anat/{sub-cmrra02_T2w_softseg.nii.gz => sub-cmrra02_space-other_T2w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-cmrra03/anat/{sub-cmrra03_T1w_softseg.json => sub-cmrra03_flip-1_mt-on_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-cmrra03/anat/{sub-cmrra03_flip-1_mt-on_MTS_softseg.nii.gz => sub-cmrra03_flip-1_mt-on_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-cmrra03/anat/{sub-cmrra03_T2star_softseg.json => sub-cmrra03_flip-2_mt-off_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-cmrra03/anat/{sub-cmrra03_flip-2_mt-off_MTS_softseg.nii.gz => sub-cmrra03_flip-2_mt-off_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-cmrra03/anat/{sub-cmrra03_T2w_softseg.json => sub-cmrra03_space-other_T1w_softseg.json} (100%) rename derivatives/labels_softseg/sub-cmrra03/anat/{sub-cmrra03_T1w_softseg.nii.gz => sub-cmrra03_space-other_T1w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-cmrra03/anat/{sub-cmrra03_flip-1_mt-on_MTS_softseg.json => sub-cmrra03_space-other_T2star_softseg.json} (100%) rename derivatives/labels_softseg/sub-cmrra03/anat/{sub-cmrra03_T2star_softseg.nii.gz => sub-cmrra03_space-other_T2star_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-cmrra03/anat/{sub-cmrra03_flip-2_mt-off_MTS_softseg.json => sub-cmrra03_space-other_T2w_softseg.json} (100%) rename derivatives/labels_softseg/sub-cmrra03/anat/{sub-cmrra03_T2w_softseg.nii.gz => sub-cmrra03_space-other_T2w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-cmrra04/anat/{sub-cmrra04_T1w_softseg.json => sub-cmrra04_flip-1_mt-on_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-cmrra04/anat/{sub-cmrra04_flip-1_mt-on_MTS_softseg.nii.gz => sub-cmrra04_flip-1_mt-on_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-cmrra04/anat/{sub-cmrra04_T2star_softseg.json => sub-cmrra04_flip-2_mt-off_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-cmrra04/anat/{sub-cmrra04_flip-2_mt-off_MTS_softseg.nii.gz => sub-cmrra04_flip-2_mt-off_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-cmrra04/anat/{sub-cmrra04_flip-1_mt-on_MTS_softseg.json => sub-cmrra04_space-other_T1w_softseg.json} (100%) rename derivatives/labels_softseg/sub-cmrra04/anat/{sub-cmrra04_T1w_softseg.nii.gz => sub-cmrra04_space-other_T1w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-cmrra04/anat/{sub-cmrra04_flip-2_mt-off_MTS_softseg.json => sub-cmrra04_space-other_T2star_softseg.json} (100%) rename derivatives/labels_softseg/sub-cmrra04/anat/{sub-cmrra04_T2star_softseg.nii.gz => sub-cmrra04_space-other_T2star_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-cmrra04/anat/{sub-cmrra04_T2w_softseg.json => sub-cmrra04_space-other_T2w_softseg.json} (100%) rename derivatives/labels_softseg/sub-cmrra04/anat/{sub-cmrra04_T2w_softseg.nii.gz => sub-cmrra04_space-other_T2w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-cmrra05/anat/{sub-cmrra05_T1w_softseg.json => sub-cmrra05_flip-1_mt-on_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-cmrra05/anat/{sub-cmrra05_flip-1_mt-on_MTS_softseg.nii.gz => sub-cmrra05_flip-1_mt-on_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-cmrra05/anat/{sub-cmrra05_T2star_softseg.json => sub-cmrra05_flip-2_mt-off_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-cmrra05/anat/{sub-cmrra05_flip-2_mt-off_MTS_softseg.nii.gz => sub-cmrra05_flip-2_mt-off_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-cmrra05/anat/{sub-cmrra05_T2w_softseg.json => sub-cmrra05_space-other_T1w_softseg.json} (100%) rename derivatives/labels_softseg/sub-cmrra05/anat/{sub-cmrra05_T1w_softseg.nii.gz => sub-cmrra05_space-other_T1w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-cmrra05/anat/{sub-cmrra05_flip-1_mt-on_MTS_softseg.json => sub-cmrra05_space-other_T2star_softseg.json} (100%) rename derivatives/labels_softseg/sub-cmrra05/anat/{sub-cmrra05_T2star_softseg.nii.gz => sub-cmrra05_space-other_T2star_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-cmrra05/anat/{sub-cmrra05_flip-2_mt-off_MTS_softseg.json => sub-cmrra05_space-other_T2w_softseg.json} (100%) rename derivatives/labels_softseg/sub-cmrra05/anat/{sub-cmrra05_T2w_softseg.nii.gz => sub-cmrra05_space-other_T2w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-cmrra06/anat/{sub-cmrra06_T1w_softseg.json => sub-cmrra06_flip-1_mt-on_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-cmrra06/anat/{sub-cmrra06_flip-1_mt-on_MTS_softseg.nii.gz => sub-cmrra06_flip-1_mt-on_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-cmrra06/anat/{sub-cmrra06_T2star_softseg.json => sub-cmrra06_flip-2_mt-off_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-cmrra06/anat/{sub-cmrra06_flip-2_mt-off_MTS_softseg.nii.gz => sub-cmrra06_flip-2_mt-off_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-cmrra06/anat/{sub-cmrra06_T2w_softseg.json => sub-cmrra06_space-other_T1w_softseg.json} (100%) rename derivatives/labels_softseg/sub-cmrra06/anat/{sub-cmrra06_T1w_softseg.nii.gz => sub-cmrra06_space-other_T1w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-cmrra06/anat/{sub-cmrra06_flip-1_mt-on_MTS_softseg.json => sub-cmrra06_space-other_T2star_softseg.json} (100%) rename derivatives/labels_softseg/sub-cmrra06/anat/{sub-cmrra06_T2star_softseg.nii.gz => sub-cmrra06_space-other_T2star_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-cmrra06/anat/{sub-cmrra06_flip-2_mt-off_MTS_softseg.json => sub-cmrra06_space-other_T2w_softseg.json} (100%) rename derivatives/labels_softseg/sub-cmrra06/anat/{sub-cmrra06_T2w_softseg.nii.gz => sub-cmrra06_space-other_T2w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-cmrrb01/anat/{sub-cmrrb01_T1w_softseg.json => sub-cmrrb01_flip-1_mt-on_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-cmrrb01/anat/{sub-cmrrb01_flip-1_mt-on_MTS_softseg.nii.gz => sub-cmrrb01_flip-1_mt-on_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-cmrrb01/anat/{sub-cmrrb01_T2star_softseg.json => sub-cmrrb01_flip-2_mt-off_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-cmrrb01/anat/{sub-cmrrb01_flip-2_mt-off_MTS_softseg.nii.gz => sub-cmrrb01_flip-2_mt-off_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-cmrrb01/anat/{sub-cmrrb01_T2w_softseg.json => sub-cmrrb01_space-other_T1w_softseg.json} (100%) rename derivatives/labels_softseg/sub-cmrrb01/anat/{sub-cmrrb01_T1w_softseg.nii.gz => sub-cmrrb01_space-other_T1w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-cmrrb01/anat/{sub-cmrrb01_flip-1_mt-on_MTS_softseg.json => sub-cmrrb01_space-other_T2star_softseg.json} (100%) rename derivatives/labels_softseg/sub-cmrrb01/anat/{sub-cmrrb01_T2star_softseg.nii.gz => sub-cmrrb01_space-other_T2star_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-cmrrb01/anat/{sub-cmrrb01_flip-2_mt-off_MTS_softseg.json => sub-cmrrb01_space-other_T2w_softseg.json} (100%) rename derivatives/labels_softseg/sub-cmrrb01/anat/{sub-cmrrb01_T2w_softseg.nii.gz => sub-cmrrb01_space-other_T2w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-cmrrb02/anat/{sub-cmrrb02_T1w_softseg.json => sub-cmrrb02_flip-1_mt-on_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-cmrrb02/anat/{sub-cmrrb02_flip-1_mt-on_MTS_softseg.nii.gz => sub-cmrrb02_flip-1_mt-on_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-cmrrb02/anat/{sub-cmrrb02_T2star_softseg.json => sub-cmrrb02_flip-2_mt-off_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-cmrrb02/anat/{sub-cmrrb02_flip-2_mt-off_MTS_softseg.nii.gz => sub-cmrrb02_flip-2_mt-off_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-cmrrb02/anat/{sub-cmrrb02_T2w_softseg.json => sub-cmrrb02_space-other_T1w_softseg.json} (100%) rename derivatives/labels_softseg/sub-cmrrb02/anat/{sub-cmrrb02_T1w_softseg.nii.gz => sub-cmrrb02_space-other_T1w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-cmrrb02/anat/{sub-cmrrb02_flip-1_mt-on_MTS_softseg.json => sub-cmrrb02_space-other_T2star_softseg.json} (100%) rename derivatives/labels_softseg/sub-cmrrb02/anat/{sub-cmrrb02_T2star_softseg.nii.gz => sub-cmrrb02_space-other_T2star_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-cmrrb02/anat/{sub-cmrrb02_flip-2_mt-off_MTS_softseg.json => sub-cmrrb02_space-other_T2w_softseg.json} (100%) rename derivatives/labels_softseg/sub-cmrrb02/anat/{sub-cmrrb02_T2w_softseg.nii.gz => sub-cmrrb02_space-other_T2w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-cmrrb03/anat/{sub-cmrrb03_flip-1_mt-on_MTS_softseg.json => sub-cmrrb03_flip-1_mt-on_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-cmrrb03/anat/{sub-cmrrb03_flip-1_mt-on_MTS_softseg.nii.gz => sub-cmrrb03_flip-1_mt-on_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-cmrrb03/anat/{sub-cmrrb03_flip-2_mt-off_MTS_softseg.json => sub-cmrrb03_flip-2_mt-off_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-cmrrb03/anat/{sub-cmrrb03_flip-2_mt-off_MTS_softseg.nii.gz => sub-cmrrb03_flip-2_mt-off_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-cmrrb03/anat/{sub-cmrrb03_T1w_softseg.json => sub-cmrrb03_space-other_T1w_softseg.json} (100%) rename derivatives/labels_softseg/sub-cmrrb03/anat/{sub-cmrrb03_T1w_softseg.nii.gz => sub-cmrrb03_space-other_T1w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-cmrrb03/anat/{sub-cmrrb03_T2star_softseg.json => sub-cmrrb03_space-other_T2star_softseg.json} (100%) rename derivatives/labels_softseg/sub-cmrrb03/anat/{sub-cmrrb03_T2star_softseg.nii.gz => sub-cmrrb03_space-other_T2star_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-cmrrb03/anat/{sub-cmrrb03_T2w_softseg.json => sub-cmrrb03_space-other_T2w_softseg.json} (100%) rename derivatives/labels_softseg/sub-cmrrb03/anat/{sub-cmrrb03_T2w_softseg.nii.gz => sub-cmrrb03_space-other_T2w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-cmrrb04/anat/{sub-cmrrb04_T1w_softseg.json => sub-cmrrb04_flip-1_mt-on_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-cmrrb04/anat/{sub-cmrrb04_flip-1_mt-on_MTS_softseg.nii.gz => sub-cmrrb04_flip-1_mt-on_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-cmrrb04/anat/{sub-cmrrb04_T2star_softseg.json => sub-cmrrb04_flip-2_mt-off_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-cmrrb04/anat/{sub-cmrrb04_flip-2_mt-off_MTS_softseg.nii.gz => sub-cmrrb04_flip-2_mt-off_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-cmrrb04/anat/{sub-cmrrb04_T2w_softseg.json => sub-cmrrb04_space-other_T1w_softseg.json} (100%) rename derivatives/labels_softseg/sub-cmrrb04/anat/{sub-cmrrb04_T1w_softseg.nii.gz => sub-cmrrb04_space-other_T1w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-cmrrb04/anat/{sub-cmrrb04_flip-1_mt-on_MTS_softseg.json => sub-cmrrb04_space-other_T2star_softseg.json} (100%) rename derivatives/labels_softseg/sub-cmrrb04/anat/{sub-cmrrb04_T2star_softseg.nii.gz => sub-cmrrb04_space-other_T2star_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-cmrrb04/anat/{sub-cmrrb04_flip-2_mt-off_MTS_softseg.json => sub-cmrrb04_space-other_T2w_softseg.json} (100%) rename derivatives/labels_softseg/sub-cmrrb04/anat/{sub-cmrrb04_T2w_softseg.nii.gz => sub-cmrrb04_space-other_T2w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-cmrrb05/anat/{sub-cmrrb05_T1w_softseg.json => sub-cmrrb05_flip-1_mt-on_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-cmrrb05/anat/{sub-cmrrb05_flip-1_mt-on_MTS_softseg.nii.gz => sub-cmrrb05_flip-1_mt-on_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-cmrrb05/anat/{sub-cmrrb05_T2star_softseg.json => sub-cmrrb05_flip-2_mt-off_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-cmrrb05/anat/{sub-cmrrb05_flip-2_mt-off_MTS_softseg.nii.gz => sub-cmrrb05_flip-2_mt-off_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-cmrrb05/anat/{sub-cmrrb05_T2w_softseg.json => sub-cmrrb05_space-other_T1w_softseg.json} (100%) rename derivatives/labels_softseg/sub-cmrrb05/anat/{sub-cmrrb05_T1w_softseg.nii.gz => sub-cmrrb05_space-other_T1w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-cmrrb05/anat/{sub-cmrrb05_flip-1_mt-on_MTS_softseg.json => sub-cmrrb05_space-other_T2star_softseg.json} (100%) rename derivatives/labels_softseg/sub-cmrrb05/anat/{sub-cmrrb05_T2star_softseg.nii.gz => sub-cmrrb05_space-other_T2star_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-cmrrb05/anat/{sub-cmrrb05_flip-2_mt-off_MTS_softseg.json => sub-cmrrb05_space-other_T2w_softseg.json} (100%) rename derivatives/labels_softseg/sub-cmrrb05/anat/{sub-cmrrb05_T2w_softseg.nii.gz => sub-cmrrb05_space-other_T2w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-cmrrb06/anat/{sub-cmrrb06_T1w_softseg.json => sub-cmrrb06_flip-1_mt-on_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-cmrrb06/anat/{sub-cmrrb06_flip-1_mt-on_MTS_softseg.nii.gz => sub-cmrrb06_flip-1_mt-on_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-cmrrb06/anat/{sub-cmrrb06_T2star_softseg.json => sub-cmrrb06_flip-2_mt-off_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-cmrrb06/anat/{sub-cmrrb06_flip-2_mt-off_MTS_softseg.nii.gz => sub-cmrrb06_flip-2_mt-off_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-cmrrb06/anat/{sub-cmrrb06_T2w_softseg.json => sub-cmrrb06_space-other_T1w_softseg.json} (100%) rename derivatives/labels_softseg/sub-cmrrb06/anat/{sub-cmrrb06_T1w_softseg.nii.gz => sub-cmrrb06_space-other_T1w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-cmrrb06/anat/{sub-cmrrb06_flip-1_mt-on_MTS_softseg.json => sub-cmrrb06_space-other_T2star_softseg.json} (100%) rename derivatives/labels_softseg/sub-cmrrb06/anat/{sub-cmrrb06_T2star_softseg.nii.gz => sub-cmrrb06_space-other_T2star_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-cmrrb06/anat/{sub-cmrrb06_flip-2_mt-off_MTS_softseg.json => sub-cmrrb06_space-other_T2w_softseg.json} (100%) rename derivatives/labels_softseg/sub-cmrrb06/anat/{sub-cmrrb06_T2w_softseg.nii.gz => sub-cmrrb06_space-other_T2w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-cmrrb07/anat/{sub-cmrrb07_flip-1_mt-on_MTS_softseg.json => sub-cmrrb07_flip-1_mt-on_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-cmrrb07/anat/{sub-cmrrb07_flip-1_mt-on_MTS_softseg.nii.gz => sub-cmrrb07_flip-1_mt-on_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-cmrrb07/anat/{sub-cmrrb07_flip-2_mt-off_MTS_softseg.json => sub-cmrrb07_flip-2_mt-off_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-cmrrb07/anat/{sub-cmrrb07_flip-2_mt-off_MTS_softseg.nii.gz => sub-cmrrb07_flip-2_mt-off_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-cmrrb07/anat/{sub-cmrrb07_T1w_softseg.json => sub-cmrrb07_space-other_T1w_softseg.json} (100%) rename derivatives/labels_softseg/sub-cmrrb07/anat/{sub-cmrrb07_T1w_softseg.nii.gz => sub-cmrrb07_space-other_T1w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-cmrrb07/anat/{sub-cmrrb07_T2star_softseg.json => sub-cmrrb07_space-other_T2star_softseg.json} (100%) rename derivatives/labels_softseg/sub-cmrrb07/anat/{sub-cmrrb07_T2star_softseg.nii.gz => sub-cmrrb07_space-other_T2star_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-cmrrb07/anat/{sub-cmrrb07_T2w_softseg.json => sub-cmrrb07_space-other_T2w_softseg.json} (100%) rename derivatives/labels_softseg/sub-cmrrb07/anat/{sub-cmrrb07_T2w_softseg.nii.gz => sub-cmrrb07_space-other_T2w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-dresden01/anat/{sub-dresden01_T1w_softseg.json => sub-dresden01_flip-1_mt-on_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-dresden01/anat/{sub-dresden01_flip-1_mt-on_MTS_softseg.nii.gz => sub-dresden01_flip-1_mt-on_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-dresden01/anat/{sub-dresden01_T2star_softseg.json => sub-dresden01_flip-2_mt-off_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-dresden01/anat/{sub-dresden01_flip-2_mt-off_MTS_softseg.nii.gz => sub-dresden01_flip-2_mt-off_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-dresden01/anat/{sub-dresden01_T2w_softseg.json => sub-dresden01_space-other_T1w_softseg.json} (100%) rename derivatives/labels_softseg/sub-dresden01/anat/{sub-dresden01_T1w_softseg.nii.gz => sub-dresden01_space-other_T1w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-dresden01/anat/{sub-dresden01_flip-1_mt-on_MTS_softseg.json => sub-dresden01_space-other_T2star_softseg.json} (100%) rename derivatives/labels_softseg/sub-dresden01/anat/{sub-dresden01_T2star_softseg.nii.gz => sub-dresden01_space-other_T2star_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-dresden01/anat/{sub-dresden01_flip-2_mt-off_MTS_softseg.json => sub-dresden01_space-other_T2w_softseg.json} (100%) rename derivatives/labels_softseg/sub-dresden01/anat/{sub-dresden01_T2w_softseg.nii.gz => sub-dresden01_space-other_T2w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-dresden02/anat/{sub-dresden02_T1w_softseg.json => sub-dresden02_flip-1_mt-on_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-dresden02/anat/{sub-dresden02_flip-1_mt-on_MTS_softseg.nii.gz => sub-dresden02_flip-1_mt-on_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-dresden02/anat/{sub-dresden02_T2star_softseg.json => sub-dresden02_flip-2_mt-off_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-dresden02/anat/{sub-dresden02_flip-2_mt-off_MTS_softseg.nii.gz => sub-dresden02_flip-2_mt-off_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-dresden02/anat/{sub-dresden02_T2w_softseg.json => sub-dresden02_space-other_T1w_softseg.json} (100%) rename derivatives/labels_softseg/sub-dresden02/anat/{sub-dresden02_T1w_softseg.nii.gz => sub-dresden02_space-other_T1w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-dresden02/anat/{sub-dresden02_flip-1_mt-on_MTS_softseg.json => sub-dresden02_space-other_T2star_softseg.json} (100%) rename derivatives/labels_softseg/sub-dresden02/anat/{sub-dresden02_T2star_softseg.nii.gz => sub-dresden02_space-other_T2star_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-dresden02/anat/{sub-dresden02_flip-2_mt-off_MTS_softseg.json => sub-dresden02_space-other_T2w_softseg.json} (100%) rename derivatives/labels_softseg/sub-dresden02/anat/{sub-dresden02_T2w_softseg.nii.gz => sub-dresden02_space-other_T2w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-fslAchieva01/anat/{sub-fslAchieva01_T1w_softseg.json => sub-fslAchieva01_flip-1_mt-on_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-fslAchieva01/anat/{sub-fslAchieva01_flip-1_mt-on_MTS_softseg.nii.gz => sub-fslAchieva01_flip-1_mt-on_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-fslAchieva01/anat/{sub-fslAchieva01_T2star_softseg.json => sub-fslAchieva01_flip-2_mt-off_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-fslAchieva01/anat/{sub-fslAchieva01_flip-2_mt-off_MTS_softseg.nii.gz => sub-fslAchieva01_flip-2_mt-off_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-fslAchieva01/anat/{sub-fslAchieva01_T2w_softseg.json => sub-fslAchieva01_space-other_T1w_softseg.json} (100%) rename derivatives/labels_softseg/sub-fslAchieva01/anat/{sub-fslAchieva01_T1w_softseg.nii.gz => sub-fslAchieva01_space-other_T1w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-fslAchieva01/anat/{sub-fslAchieva01_flip-1_mt-on_MTS_softseg.json => sub-fslAchieva01_space-other_T2star_softseg.json} (100%) rename derivatives/labels_softseg/sub-fslAchieva01/anat/{sub-fslAchieva01_T2star_softseg.nii.gz => sub-fslAchieva01_space-other_T2star_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-fslAchieva01/anat/{sub-fslAchieva01_flip-2_mt-off_MTS_softseg.json => sub-fslAchieva01_space-other_T2w_softseg.json} (100%) rename derivatives/labels_softseg/sub-fslAchieva01/anat/{sub-fslAchieva01_T2w_softseg.nii.gz => sub-fslAchieva01_space-other_T2w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-fslAchieva02/anat/{sub-fslAchieva02_flip-1_mt-on_MTS_softseg.json => sub-fslAchieva02_flip-1_mt-on_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-fslAchieva02/anat/{sub-fslAchieva02_flip-1_mt-on_MTS_softseg.nii.gz => sub-fslAchieva02_flip-1_mt-on_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-fslAchieva02/anat/{sub-fslAchieva02_flip-2_mt-off_MTS_softseg.json => sub-fslAchieva02_flip-2_mt-off_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-fslAchieva02/anat/{sub-fslAchieva02_flip-2_mt-off_MTS_softseg.nii.gz => sub-fslAchieva02_flip-2_mt-off_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-fslAchieva02/anat/{sub-fslAchieva02_T1w_softseg.json => sub-fslAchieva02_space-other_T1w_softseg.json} (100%) rename derivatives/labels_softseg/sub-fslAchieva02/anat/{sub-fslAchieva02_T1w_softseg.nii.gz => sub-fslAchieva02_space-other_T1w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-fslAchieva02/anat/{sub-fslAchieva02_T2star_softseg.json => sub-fslAchieva02_space-other_T2star_softseg.json} (100%) rename derivatives/labels_softseg/sub-fslAchieva02/anat/{sub-fslAchieva02_T2star_softseg.nii.gz => sub-fslAchieva02_space-other_T2star_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-fslAchieva02/anat/{sub-fslAchieva02_T2w_softseg.json => sub-fslAchieva02_space-other_T2w_softseg.json} (100%) rename derivatives/labels_softseg/sub-fslAchieva02/anat/{sub-fslAchieva02_T2w_softseg.nii.gz => sub-fslAchieva02_space-other_T2w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-fslAchieva03/anat/{sub-fslAchieva03_T1w_softseg.json => sub-fslAchieva03_flip-1_mt-on_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-fslAchieva03/anat/{sub-fslAchieva03_flip-1_mt-on_MTS_softseg.nii.gz => sub-fslAchieva03_flip-1_mt-on_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-fslAchieva03/anat/{sub-fslAchieva03_T2star_softseg.json => sub-fslAchieva03_flip-2_mt-off_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-fslAchieva03/anat/{sub-fslAchieva03_flip-2_mt-off_MTS_softseg.nii.gz => sub-fslAchieva03_flip-2_mt-off_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-fslAchieva03/anat/{sub-fslAchieva03_T2w_softseg.json => sub-fslAchieva03_space-other_T1w_softseg.json} (100%) rename derivatives/labels_softseg/sub-fslAchieva03/anat/{sub-fslAchieva03_T1w_softseg.nii.gz => sub-fslAchieva03_space-other_T1w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-fslAchieva03/anat/{sub-fslAchieva03_flip-1_mt-on_MTS_softseg.json => sub-fslAchieva03_space-other_T2star_softseg.json} (100%) rename derivatives/labels_softseg/sub-fslAchieva03/anat/{sub-fslAchieva03_T2star_softseg.nii.gz => sub-fslAchieva03_space-other_T2star_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-fslAchieva03/anat/{sub-fslAchieva03_flip-2_mt-off_MTS_softseg.json => sub-fslAchieva03_space-other_T2w_softseg.json} (100%) rename derivatives/labels_softseg/sub-fslAchieva03/anat/{sub-fslAchieva03_T2w_softseg.nii.gz => sub-fslAchieva03_space-other_T2w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-fslAchieva04/anat/{sub-fslAchieva04_T1w_softseg.json => sub-fslAchieva04_flip-1_mt-on_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-fslAchieva04/anat/{sub-fslAchieva04_flip-1_mt-on_MTS_softseg.nii.gz => sub-fslAchieva04_flip-1_mt-on_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-fslAchieva04/anat/{sub-fslAchieva04_T2star_softseg.json => sub-fslAchieva04_flip-2_mt-off_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-fslAchieva04/anat/{sub-fslAchieva04_flip-2_mt-off_MTS_softseg.nii.gz => sub-fslAchieva04_flip-2_mt-off_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-fslAchieva04/anat/{sub-fslAchieva04_T2w_softseg.json => sub-fslAchieva04_space-other_T1w_softseg.json} (100%) rename derivatives/labels_softseg/sub-fslAchieva04/anat/{sub-fslAchieva04_T1w_softseg.nii.gz => sub-fslAchieva04_space-other_T1w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-fslAchieva04/anat/{sub-fslAchieva04_flip-1_mt-on_MTS_softseg.json => sub-fslAchieva04_space-other_T2star_softseg.json} (100%) rename derivatives/labels_softseg/sub-fslAchieva04/anat/{sub-fslAchieva04_T2star_softseg.nii.gz => sub-fslAchieva04_space-other_T2star_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-fslAchieva04/anat/{sub-fslAchieva04_flip-2_mt-off_MTS_softseg.json => sub-fslAchieva04_space-other_T2w_softseg.json} (100%) rename derivatives/labels_softseg/sub-fslAchieva04/anat/{sub-fslAchieva04_T2w_softseg.nii.gz => sub-fslAchieva04_space-other_T2w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-fslAchieva05/anat/{sub-fslAchieva05_T1w_softseg.json => sub-fslAchieva05_flip-1_mt-on_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-fslAchieva05/anat/{sub-fslAchieva05_flip-1_mt-on_MTS_softseg.nii.gz => sub-fslAchieva05_flip-1_mt-on_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-fslAchieva05/anat/{sub-fslAchieva05_T2star_softseg.json => sub-fslAchieva05_flip-2_mt-off_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-fslAchieva05/anat/{sub-fslAchieva05_flip-2_mt-off_MTS_softseg.nii.gz => sub-fslAchieva05_flip-2_mt-off_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-fslAchieva05/anat/{sub-fslAchieva05_T2w_softseg.json => sub-fslAchieva05_space-other_T1w_softseg.json} (100%) rename derivatives/labels_softseg/sub-fslAchieva05/anat/{sub-fslAchieva05_T1w_softseg.nii.gz => sub-fslAchieva05_space-other_T1w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-fslAchieva05/anat/{sub-fslAchieva05_flip-1_mt-on_MTS_softseg.json => sub-fslAchieva05_space-other_T2star_softseg.json} (100%) rename derivatives/labels_softseg/sub-fslAchieva05/anat/{sub-fslAchieva05_T2star_softseg.nii.gz => sub-fslAchieva05_space-other_T2star_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-fslAchieva05/anat/{sub-fslAchieva05_flip-2_mt-off_MTS_softseg.json => sub-fslAchieva05_space-other_T2w_softseg.json} (100%) rename derivatives/labels_softseg/sub-fslAchieva05/anat/{sub-fslAchieva05_T2w_softseg.nii.gz => sub-fslAchieva05_space-other_T2w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-fslAchieva06/anat/{sub-fslAchieva06_T1w_softseg.json => sub-fslAchieva06_flip-1_mt-on_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-fslAchieva06/anat/{sub-fslAchieva06_flip-1_mt-on_MTS_softseg.nii.gz => sub-fslAchieva06_flip-1_mt-on_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-fslAchieva06/anat/{sub-fslAchieva06_flip-1_mt-on_MTS_softseg.json => sub-fslAchieva06_flip-2_mt-off_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-fslAchieva06/anat/{sub-fslAchieva06_flip-2_mt-off_MTS_softseg.nii.gz => sub-fslAchieva06_flip-2_mt-off_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-fslAchieva06/anat/{sub-fslAchieva06_flip-2_mt-off_MTS_softseg.json => sub-fslAchieva06_space-other_T1w_softseg.json} (100%) rename derivatives/labels_softseg/sub-fslAchieva06/anat/{sub-fslAchieva06_T1w_softseg.nii.gz => sub-fslAchieva06_space-other_T1w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-fslAchieva06/anat/{sub-fslAchieva06_T2star_softseg.json => sub-fslAchieva06_space-other_T2star_softseg.json} (100%) rename derivatives/labels_softseg/sub-fslAchieva06/anat/{sub-fslAchieva06_T2star_softseg.nii.gz => sub-fslAchieva06_space-other_T2star_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-fslAchieva06/anat/{sub-fslAchieva06_T2w_softseg.json => sub-fslAchieva06_space-other_T2w_softseg.json} (100%) rename derivatives/labels_softseg/sub-fslAchieva06/anat/{sub-fslAchieva06_T2w_softseg.nii.gz => sub-fslAchieva06_space-other_T2w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-fslPrisma01/anat/{sub-fslPrisma01_T1w_softseg.json => sub-fslPrisma01_flip-1_mt-on_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-fslPrisma01/anat/{sub-fslPrisma01_flip-1_mt-on_MTS_softseg.nii.gz => sub-fslPrisma01_flip-1_mt-on_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-fslPrisma01/anat/{sub-fslPrisma01_T2star_softseg.json => sub-fslPrisma01_flip-2_mt-off_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-fslPrisma01/anat/{sub-fslPrisma01_flip-2_mt-off_MTS_softseg.nii.gz => sub-fslPrisma01_flip-2_mt-off_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-fslPrisma01/anat/{sub-fslPrisma01_T2w_softseg.json => sub-fslPrisma01_space-other_T1w_softseg.json} (100%) rename derivatives/labels_softseg/sub-fslPrisma01/anat/{sub-fslPrisma01_T1w_softseg.nii.gz => sub-fslPrisma01_space-other_T1w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-fslPrisma01/anat/{sub-fslPrisma01_flip-1_mt-on_MTS_softseg.json => sub-fslPrisma01_space-other_T2star_softseg.json} (100%) rename derivatives/labels_softseg/sub-fslPrisma01/anat/{sub-fslPrisma01_T2star_softseg.nii.gz => sub-fslPrisma01_space-other_T2star_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-fslPrisma01/anat/{sub-fslPrisma01_flip-2_mt-off_MTS_softseg.json => sub-fslPrisma01_space-other_T2w_softseg.json} (100%) rename derivatives/labels_softseg/sub-fslPrisma01/anat/{sub-fslPrisma01_T2w_softseg.nii.gz => sub-fslPrisma01_space-other_T2w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-fslPrisma02/anat/{sub-fslPrisma02_T1w_softseg.json => sub-fslPrisma02_flip-1_mt-on_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-fslPrisma02/anat/{sub-fslPrisma02_flip-1_mt-on_MTS_softseg.nii.gz => sub-fslPrisma02_flip-1_mt-on_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-fslPrisma02/anat/{sub-fslPrisma02_T2star_softseg.json => sub-fslPrisma02_flip-2_mt-off_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-fslPrisma02/anat/{sub-fslPrisma02_flip-2_mt-off_MTS_softseg.nii.gz => sub-fslPrisma02_flip-2_mt-off_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-fslPrisma02/anat/{sub-fslPrisma02_T2w_softseg.json => sub-fslPrisma02_space-other_T1w_softseg.json} (100%) rename derivatives/labels_softseg/sub-fslPrisma02/anat/{sub-fslPrisma02_T1w_softseg.nii.gz => sub-fslPrisma02_space-other_T1w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-fslPrisma02/anat/{sub-fslPrisma02_flip-1_mt-on_MTS_softseg.json => sub-fslPrisma02_space-other_T2star_softseg.json} (100%) rename derivatives/labels_softseg/sub-fslPrisma02/anat/{sub-fslPrisma02_T2star_softseg.nii.gz => sub-fslPrisma02_space-other_T2star_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-fslPrisma02/anat/{sub-fslPrisma02_flip-2_mt-off_MTS_softseg.json => sub-fslPrisma02_space-other_T2w_softseg.json} (100%) rename derivatives/labels_softseg/sub-fslPrisma02/anat/{sub-fslPrisma02_T2w_softseg.nii.gz => sub-fslPrisma02_space-other_T2w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-fslPrisma03/anat/{sub-fslPrisma03_T1w_softseg.json => sub-fslPrisma03_flip-1_mt-on_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-fslPrisma03/anat/{sub-fslPrisma03_flip-1_mt-on_MTS_softseg.nii.gz => sub-fslPrisma03_flip-1_mt-on_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-fslPrisma03/anat/{sub-fslPrisma03_T2star_softseg.json => sub-fslPrisma03_flip-2_mt-off_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-fslPrisma03/anat/{sub-fslPrisma03_flip-2_mt-off_MTS_softseg.nii.gz => sub-fslPrisma03_flip-2_mt-off_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-fslPrisma03/anat/{sub-fslPrisma03_T2w_softseg.json => sub-fslPrisma03_space-other_T1w_softseg.json} (100%) rename derivatives/labels_softseg/sub-fslPrisma03/anat/{sub-fslPrisma03_T1w_softseg.nii.gz => sub-fslPrisma03_space-other_T1w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-fslPrisma03/anat/{sub-fslPrisma03_flip-1_mt-on_MTS_softseg.json => sub-fslPrisma03_space-other_T2star_softseg.json} (100%) rename derivatives/labels_softseg/sub-fslPrisma03/anat/{sub-fslPrisma03_T2star_softseg.nii.gz => sub-fslPrisma03_space-other_T2star_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-fslPrisma03/anat/{sub-fslPrisma03_flip-2_mt-off_MTS_softseg.json => sub-fslPrisma03_space-other_T2w_softseg.json} (100%) rename derivatives/labels_softseg/sub-fslPrisma03/anat/{sub-fslPrisma03_T2w_softseg.nii.gz => sub-fslPrisma03_space-other_T2w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-fslPrisma04/anat/{sub-fslPrisma04_T1w_softseg.json => sub-fslPrisma04_flip-1_mt-on_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-fslPrisma04/anat/{sub-fslPrisma04_flip-1_mt-on_MTS_softseg.nii.gz => sub-fslPrisma04_flip-1_mt-on_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-fslPrisma04/anat/{sub-fslPrisma04_flip-1_mt-on_MTS_softseg.json => sub-fslPrisma04_flip-2_mt-off_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-fslPrisma04/anat/{sub-fslPrisma04_flip-2_mt-off_MTS_softseg.nii.gz => sub-fslPrisma04_flip-2_mt-off_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-fslPrisma04/anat/{sub-fslPrisma04_flip-2_mt-off_MTS_softseg.json => sub-fslPrisma04_space-other_T1w_softseg.json} (100%) rename derivatives/labels_softseg/sub-fslPrisma04/anat/{sub-fslPrisma04_T1w_softseg.nii.gz => sub-fslPrisma04_space-other_T1w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-fslPrisma04/anat/{sub-fslPrisma04_T2star_softseg.json => sub-fslPrisma04_space-other_T2star_softseg.json} (100%) rename derivatives/labels_softseg/sub-fslPrisma04/anat/{sub-fslPrisma04_T2star_softseg.nii.gz => sub-fslPrisma04_space-other_T2star_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-fslPrisma04/anat/{sub-fslPrisma04_T2w_softseg.json => sub-fslPrisma04_space-other_T2w_softseg.json} (100%) rename derivatives/labels_softseg/sub-fslPrisma04/anat/{sub-fslPrisma04_T2w_softseg.nii.gz => sub-fslPrisma04_space-other_T2w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-fslPrisma05/anat/{sub-fslPrisma05_T1w_softseg.json => sub-fslPrisma05_flip-1_mt-on_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-fslPrisma05/anat/{sub-fslPrisma05_flip-1_mt-on_MTS_softseg.nii.gz => sub-fslPrisma05_flip-1_mt-on_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-fslPrisma05/anat/{sub-fslPrisma05_T2star_softseg.json => sub-fslPrisma05_flip-2_mt-off_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-fslPrisma05/anat/{sub-fslPrisma05_flip-2_mt-off_MTS_softseg.nii.gz => sub-fslPrisma05_flip-2_mt-off_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-fslPrisma05/anat/{sub-fslPrisma05_T2w_softseg.json => sub-fslPrisma05_space-other_T1w_softseg.json} (100%) rename derivatives/labels_softseg/sub-fslPrisma05/anat/{sub-fslPrisma05_T1w_softseg.nii.gz => sub-fslPrisma05_space-other_T1w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-fslPrisma05/anat/{sub-fslPrisma05_flip-1_mt-on_MTS_softseg.json => sub-fslPrisma05_space-other_T2star_softseg.json} (100%) rename derivatives/labels_softseg/sub-fslPrisma05/anat/{sub-fslPrisma05_T2star_softseg.nii.gz => sub-fslPrisma05_space-other_T2star_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-fslPrisma05/anat/{sub-fslPrisma05_flip-2_mt-off_MTS_softseg.json => sub-fslPrisma05_space-other_T2w_softseg.json} (100%) rename derivatives/labels_softseg/sub-fslPrisma05/anat/{sub-fslPrisma05_T2w_softseg.nii.gz => sub-fslPrisma05_space-other_T2w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-fslPrisma06/anat/{sub-fslPrisma06_T1w_softseg.json => sub-fslPrisma06_flip-1_mt-on_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-fslPrisma06/anat/{sub-fslPrisma06_flip-1_mt-on_MTS_softseg.nii.gz => sub-fslPrisma06_flip-1_mt-on_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-fslPrisma06/anat/{sub-fslPrisma06_T2star_softseg.json => sub-fslPrisma06_flip-2_mt-off_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-fslPrisma06/anat/{sub-fslPrisma06_flip-2_mt-off_MTS_softseg.nii.gz => sub-fslPrisma06_flip-2_mt-off_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-fslPrisma06/anat/{sub-fslPrisma06_T2w_softseg.json => sub-fslPrisma06_space-other_T1w_softseg.json} (100%) rename derivatives/labels_softseg/sub-fslPrisma06/anat/{sub-fslPrisma06_T1w_softseg.nii.gz => sub-fslPrisma06_space-other_T1w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-fslPrisma06/anat/{sub-fslPrisma06_flip-1_mt-on_MTS_softseg.json => sub-fslPrisma06_space-other_T2star_softseg.json} (100%) rename derivatives/labels_softseg/sub-fslPrisma06/anat/{sub-fslPrisma06_T2star_softseg.nii.gz => sub-fslPrisma06_space-other_T2star_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-fslPrisma06/anat/{sub-fslPrisma06_flip-2_mt-off_MTS_softseg.json => sub-fslPrisma06_space-other_T2w_softseg.json} (100%) rename derivatives/labels_softseg/sub-fslPrisma06/anat/{sub-fslPrisma06_T2w_softseg.nii.gz => sub-fslPrisma06_space-other_T2w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-geneva01/anat/{sub-geneva01_T1w_softseg.json => sub-geneva01_flip-1_mt-on_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-geneva01/anat/{sub-geneva01_flip-1_mt-on_MTS_softseg.nii.gz => sub-geneva01_flip-1_mt-on_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-geneva01/anat/{sub-geneva01_T2star_softseg.json => sub-geneva01_flip-2_mt-off_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-geneva01/anat/{sub-geneva01_flip-2_mt-off_MTS_softseg.nii.gz => sub-geneva01_flip-2_mt-off_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-geneva01/anat/{sub-geneva01_T2w_softseg.json => sub-geneva01_space-other_T1w_softseg.json} (100%) rename derivatives/labels_softseg/sub-geneva01/anat/{sub-geneva01_T1w_softseg.nii.gz => sub-geneva01_space-other_T1w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-geneva01/anat/{sub-geneva01_flip-1_mt-on_MTS_softseg.json => sub-geneva01_space-other_T2star_softseg.json} (100%) rename derivatives/labels_softseg/sub-geneva01/anat/{sub-geneva01_T2star_softseg.nii.gz => sub-geneva01_space-other_T2star_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-geneva01/anat/{sub-geneva01_flip-2_mt-off_MTS_softseg.json => sub-geneva01_space-other_T2w_softseg.json} (100%) rename derivatives/labels_softseg/sub-geneva01/anat/{sub-geneva01_T2w_softseg.nii.gz => sub-geneva01_space-other_T2w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-geneva02/anat/{sub-geneva02_flip-1_mt-on_MTS_softseg.json => sub-geneva02_flip-1_mt-on_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-geneva02/anat/{sub-geneva02_flip-1_mt-on_MTS_softseg.nii.gz => sub-geneva02_flip-1_mt-on_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-geneva02/anat/{sub-geneva02_flip-2_mt-off_MTS_softseg.json => sub-geneva02_flip-2_mt-off_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-geneva02/anat/{sub-geneva02_flip-2_mt-off_MTS_softseg.nii.gz => sub-geneva02_flip-2_mt-off_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-geneva02/anat/{sub-geneva02_T1w_softseg.json => sub-geneva02_space-other_T1w_softseg.json} (100%) rename derivatives/labels_softseg/sub-geneva02/anat/{sub-geneva02_T1w_softseg.nii.gz => sub-geneva02_space-other_T1w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-geneva02/anat/{sub-geneva02_T2star_softseg.json => sub-geneva02_space-other_T2star_softseg.json} (100%) rename derivatives/labels_softseg/sub-geneva02/anat/{sub-geneva02_T2star_softseg.nii.gz => sub-geneva02_space-other_T2star_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-geneva02/anat/{sub-geneva02_T2w_softseg.json => sub-geneva02_space-other_T2w_softseg.json} (100%) rename derivatives/labels_softseg/sub-geneva02/anat/{sub-geneva02_T2w_softseg.nii.gz => sub-geneva02_space-other_T2w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-geneva03/anat/{sub-geneva03_T1w_softseg.json => sub-geneva03_flip-1_mt-on_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-geneva03/anat/{sub-geneva03_flip-1_mt-on_MTS_softseg.nii.gz => sub-geneva03_flip-1_mt-on_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-geneva03/anat/{sub-geneva03_T2star_softseg.json => sub-geneva03_flip-2_mt-off_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-geneva03/anat/{sub-geneva03_flip-2_mt-off_MTS_softseg.nii.gz => sub-geneva03_flip-2_mt-off_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-geneva03/anat/{sub-geneva03_T2w_softseg.json => sub-geneva03_space-other_T1w_softseg.json} (100%) rename derivatives/labels_softseg/sub-geneva03/anat/{sub-geneva03_T1w_softseg.nii.gz => sub-geneva03_space-other_T1w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-geneva03/anat/{sub-geneva03_flip-1_mt-on_MTS_softseg.json => sub-geneva03_space-other_T2star_softseg.json} (100%) rename derivatives/labels_softseg/sub-geneva03/anat/{sub-geneva03_T2star_softseg.nii.gz => sub-geneva03_space-other_T2star_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-geneva03/anat/{sub-geneva03_flip-2_mt-off_MTS_softseg.json => sub-geneva03_space-other_T2w_softseg.json} (100%) rename derivatives/labels_softseg/sub-geneva03/anat/{sub-geneva03_T2w_softseg.nii.gz => sub-geneva03_space-other_T2w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-geneva04/anat/{sub-geneva04_T1w_softseg.json => sub-geneva04_flip-1_mt-on_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-geneva04/anat/{sub-geneva04_flip-1_mt-on_MTS_softseg.nii.gz => sub-geneva04_flip-1_mt-on_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-geneva04/anat/{sub-geneva04_T2star_softseg.json => sub-geneva04_flip-2_mt-off_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-geneva04/anat/{sub-geneva04_flip-2_mt-off_MTS_softseg.nii.gz => sub-geneva04_flip-2_mt-off_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-geneva04/anat/{sub-geneva04_T2w_softseg.json => sub-geneva04_space-other_T1w_softseg.json} (100%) rename derivatives/labels_softseg/sub-geneva04/anat/{sub-geneva04_T1w_softseg.nii.gz => sub-geneva04_space-other_T1w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-geneva04/anat/{sub-geneva04_flip-1_mt-on_MTS_softseg.json => sub-geneva04_space-other_T2star_softseg.json} (100%) rename derivatives/labels_softseg/sub-geneva04/anat/{sub-geneva04_T2star_softseg.nii.gz => sub-geneva04_space-other_T2star_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-geneva04/anat/{sub-geneva04_flip-2_mt-off_MTS_softseg.json => sub-geneva04_space-other_T2w_softseg.json} (100%) rename derivatives/labels_softseg/sub-geneva04/anat/{sub-geneva04_T2w_softseg.nii.gz => sub-geneva04_space-other_T2w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-geneva05/anat/{sub-geneva05_T1w_softseg.json => sub-geneva05_flip-1_mt-on_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-geneva05/anat/{sub-geneva05_flip-1_mt-on_MTS_softseg.nii.gz => sub-geneva05_flip-1_mt-on_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-geneva05/anat/{sub-geneva05_T2star_softseg.json => sub-geneva05_flip-2_mt-off_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-geneva05/anat/{sub-geneva05_flip-2_mt-off_MTS_softseg.nii.gz => sub-geneva05_flip-2_mt-off_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-geneva05/anat/{sub-geneva05_T2w_softseg.json => sub-geneva05_space-other_T1w_softseg.json} (100%) rename derivatives/labels_softseg/sub-geneva05/anat/{sub-geneva05_T1w_softseg.nii.gz => sub-geneva05_space-other_T1w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-geneva05/anat/{sub-geneva05_flip-1_mt-on_MTS_softseg.json => sub-geneva05_space-other_T2star_softseg.json} (100%) rename derivatives/labels_softseg/sub-geneva05/anat/{sub-geneva05_T2star_softseg.nii.gz => sub-geneva05_space-other_T2star_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-geneva05/anat/{sub-geneva05_flip-2_mt-off_MTS_softseg.json => sub-geneva05_space-other_T2w_softseg.json} (100%) rename derivatives/labels_softseg/sub-geneva05/anat/{sub-geneva05_T2w_softseg.nii.gz => sub-geneva05_space-other_T2w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-geneva06/anat/{sub-geneva06_T1w_softseg.json => sub-geneva06_flip-1_mt-on_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-geneva06/anat/{sub-geneva06_flip-1_mt-on_MTS_softseg.nii.gz => sub-geneva06_flip-1_mt-on_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-geneva06/anat/{sub-geneva06_T2star_softseg.json => sub-geneva06_flip-2_mt-off_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-geneva06/anat/{sub-geneva06_flip-2_mt-off_MTS_softseg.nii.gz => sub-geneva06_flip-2_mt-off_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-geneva06/anat/{sub-geneva06_T2w_softseg.json => sub-geneva06_space-other_T1w_softseg.json} (100%) rename derivatives/labels_softseg/sub-geneva06/anat/{sub-geneva06_T1w_softseg.nii.gz => sub-geneva06_space-other_T1w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-geneva06/anat/{sub-geneva06_flip-1_mt-on_MTS_softseg.json => sub-geneva06_space-other_T2star_softseg.json} (100%) rename derivatives/labels_softseg/sub-geneva06/anat/{sub-geneva06_T2star_softseg.nii.gz => sub-geneva06_space-other_T2star_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-geneva06/anat/{sub-geneva06_flip-2_mt-off_MTS_softseg.json => sub-geneva06_space-other_T2w_softseg.json} (100%) rename derivatives/labels_softseg/sub-geneva06/anat/{sub-geneva06_T2w_softseg.nii.gz => sub-geneva06_space-other_T2w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-hamburg01/anat/{sub-hamburg01_T1w_softseg.json => sub-hamburg01_flip-1_mt-on_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-hamburg01/anat/{sub-hamburg01_flip-1_mt-on_MTS_softseg.nii.gz => sub-hamburg01_flip-1_mt-on_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-hamburg01/anat/{sub-hamburg01_T2star_softseg.json => sub-hamburg01_flip-2_mt-off_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-hamburg01/anat/{sub-hamburg01_flip-2_mt-off_MTS_softseg.nii.gz => sub-hamburg01_flip-2_mt-off_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-hamburg01/anat/{sub-hamburg01_T2w_softseg.json => sub-hamburg01_space-other_T1w_softseg.json} (100%) rename derivatives/labels_softseg/sub-hamburg01/anat/{sub-hamburg01_T1w_softseg.nii.gz => sub-hamburg01_space-other_T1w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-hamburg01/anat/{sub-hamburg01_flip-1_mt-on_MTS_softseg.json => sub-hamburg01_space-other_T2star_softseg.json} (100%) rename derivatives/labels_softseg/sub-hamburg01/anat/{sub-hamburg01_T2star_softseg.nii.gz => sub-hamburg01_space-other_T2star_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-hamburg01/anat/{sub-hamburg01_flip-2_mt-off_MTS_softseg.json => sub-hamburg01_space-other_T2w_softseg.json} (100%) rename derivatives/labels_softseg/sub-hamburg01/anat/{sub-hamburg01_T2w_softseg.nii.gz => sub-hamburg01_space-other_T2w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-hamburg02/anat/{sub-hamburg02_T1w_softseg.json => sub-hamburg02_flip-1_mt-on_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-hamburg02/anat/{sub-hamburg02_flip-1_mt-on_MTS_softseg.nii.gz => sub-hamburg02_flip-1_mt-on_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-hamburg02/anat/{sub-hamburg02_T2star_softseg.json => sub-hamburg02_flip-2_mt-off_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-hamburg02/anat/{sub-hamburg02_flip-2_mt-off_MTS_softseg.nii.gz => sub-hamburg02_flip-2_mt-off_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-hamburg02/anat/{sub-hamburg02_T2w_softseg.json => sub-hamburg02_space-other_T1w_softseg.json} (100%) rename derivatives/labels_softseg/sub-hamburg02/anat/{sub-hamburg02_T1w_softseg.nii.gz => sub-hamburg02_space-other_T1w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-hamburg02/anat/{sub-hamburg02_flip-1_mt-on_MTS_softseg.json => sub-hamburg02_space-other_T2star_softseg.json} (100%) rename derivatives/labels_softseg/sub-hamburg02/anat/{sub-hamburg02_T2star_softseg.nii.gz => sub-hamburg02_space-other_T2star_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-hamburg02/anat/{sub-hamburg02_flip-2_mt-off_MTS_softseg.json => sub-hamburg02_space-other_T2w_softseg.json} (100%) rename derivatives/labels_softseg/sub-hamburg02/anat/{sub-hamburg02_T2w_softseg.nii.gz => sub-hamburg02_space-other_T2w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-hamburg03/anat/{sub-hamburg03_T1w_softseg.json => sub-hamburg03_flip-1_mt-on_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-hamburg03/anat/{sub-hamburg03_flip-1_mt-on_MTS_softseg.nii.gz => sub-hamburg03_flip-1_mt-on_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-hamburg03/anat/{sub-hamburg03_T2star_softseg.json => sub-hamburg03_flip-2_mt-off_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-hamburg03/anat/{sub-hamburg03_flip-2_mt-off_MTS_softseg.nii.gz => sub-hamburg03_flip-2_mt-off_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-hamburg03/anat/{sub-hamburg03_T2w_softseg.json => sub-hamburg03_space-other_T1w_softseg.json} (100%) rename derivatives/labels_softseg/sub-hamburg03/anat/{sub-hamburg03_T1w_softseg.nii.gz => sub-hamburg03_space-other_T1w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-hamburg03/anat/{sub-hamburg03_flip-1_mt-on_MTS_softseg.json => sub-hamburg03_space-other_T2star_softseg.json} (100%) rename derivatives/labels_softseg/sub-hamburg03/anat/{sub-hamburg03_T2star_softseg.nii.gz => sub-hamburg03_space-other_T2star_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-hamburg03/anat/{sub-hamburg03_flip-2_mt-off_MTS_softseg.json => sub-hamburg03_space-other_T2w_softseg.json} (100%) rename derivatives/labels_softseg/sub-hamburg03/anat/{sub-hamburg03_T2w_softseg.nii.gz => sub-hamburg03_space-other_T2w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-hamburg04/anat/{sub-hamburg04_T1w_softseg.json => sub-hamburg04_flip-1_mt-on_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-hamburg04/anat/{sub-hamburg04_flip-1_mt-on_MTS_softseg.nii.gz => sub-hamburg04_flip-1_mt-on_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-hamburg04/anat/{sub-hamburg04_T2star_softseg.json => sub-hamburg04_flip-2_mt-off_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-hamburg04/anat/{sub-hamburg04_flip-2_mt-off_MTS_softseg.nii.gz => sub-hamburg04_flip-2_mt-off_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-hamburg04/anat/{sub-hamburg04_T2w_softseg.json => sub-hamburg04_space-other_T1w_softseg.json} (100%) rename derivatives/labels_softseg/sub-hamburg04/anat/{sub-hamburg04_T1w_softseg.nii.gz => sub-hamburg04_space-other_T1w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-hamburg04/anat/{sub-hamburg04_flip-1_mt-on_MTS_softseg.json => sub-hamburg04_space-other_T2star_softseg.json} (100%) rename derivatives/labels_softseg/sub-hamburg04/anat/{sub-hamburg04_T2star_softseg.nii.gz => sub-hamburg04_space-other_T2star_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-hamburg04/anat/{sub-hamburg04_flip-2_mt-off_MTS_softseg.json => sub-hamburg04_space-other_T2w_softseg.json} (100%) rename derivatives/labels_softseg/sub-hamburg04/anat/{sub-hamburg04_T2w_softseg.nii.gz => sub-hamburg04_space-other_T2w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-hamburg05/anat/{sub-hamburg05_T1w_softseg.json => sub-hamburg05_flip-1_mt-on_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-hamburg05/anat/{sub-hamburg05_flip-1_mt-on_MTS_softseg.nii.gz => sub-hamburg05_flip-1_mt-on_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-hamburg05/anat/{sub-hamburg05_T2star_softseg.json => sub-hamburg05_flip-2_mt-off_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-hamburg05/anat/{sub-hamburg05_flip-2_mt-off_MTS_softseg.nii.gz => sub-hamburg05_flip-2_mt-off_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-hamburg05/anat/{sub-hamburg05_T2w_softseg.json => sub-hamburg05_space-other_T1w_softseg.json} (100%) rename derivatives/labels_softseg/sub-hamburg05/anat/{sub-hamburg05_T1w_softseg.nii.gz => sub-hamburg05_space-other_T1w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-hamburg05/anat/{sub-hamburg05_flip-1_mt-on_MTS_softseg.json => sub-hamburg05_space-other_T2star_softseg.json} (100%) rename derivatives/labels_softseg/sub-hamburg05/anat/{sub-hamburg05_T2star_softseg.nii.gz => sub-hamburg05_space-other_T2star_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-hamburg05/anat/{sub-hamburg05_flip-2_mt-off_MTS_softseg.json => sub-hamburg05_space-other_T2w_softseg.json} (100%) rename derivatives/labels_softseg/sub-hamburg05/anat/{sub-hamburg05_T2w_softseg.nii.gz => sub-hamburg05_space-other_T2w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-hamburg06/anat/{sub-hamburg06_T1w_softseg.json => sub-hamburg06_flip-1_mt-on_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-hamburg06/anat/{sub-hamburg06_flip-1_mt-on_MTS_softseg.nii.gz => sub-hamburg06_flip-1_mt-on_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-hamburg06/anat/{sub-hamburg06_T2star_softseg.json => sub-hamburg06_flip-2_mt-off_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-hamburg06/anat/{sub-hamburg06_flip-2_mt-off_MTS_softseg.nii.gz => sub-hamburg06_flip-2_mt-off_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-hamburg06/anat/{sub-hamburg06_T2w_softseg.json => sub-hamburg06_space-other_T1w_softseg.json} (100%) rename derivatives/labels_softseg/sub-hamburg06/anat/{sub-hamburg06_T1w_softseg.nii.gz => sub-hamburg06_space-other_T1w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-hamburg06/anat/{sub-hamburg06_flip-1_mt-on_MTS_softseg.json => sub-hamburg06_space-other_T2star_softseg.json} (100%) rename derivatives/labels_softseg/sub-hamburg06/anat/{sub-hamburg06_T2star_softseg.nii.gz => sub-hamburg06_space-other_T2star_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-hamburg06/anat/{sub-hamburg06_flip-2_mt-off_MTS_softseg.json => sub-hamburg06_space-other_T2w_softseg.json} (100%) rename derivatives/labels_softseg/sub-hamburg06/anat/{sub-hamburg06_T2w_softseg.nii.gz => sub-hamburg06_space-other_T2w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-juntendo750w01/anat/{sub-juntendo750w01_T1w_softseg.json => sub-juntendo750w01_flip-1_mt-on_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-juntendo750w01/anat/{sub-juntendo750w01_flip-1_mt-on_MTS_softseg.nii.gz => sub-juntendo750w01_flip-1_mt-on_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-juntendo750w01/anat/{sub-juntendo750w01_T2star_softseg.json => sub-juntendo750w01_flip-2_mt-off_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-juntendo750w01/anat/{sub-juntendo750w01_flip-2_mt-off_MTS_softseg.nii.gz => sub-juntendo750w01_flip-2_mt-off_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-juntendo750w01/anat/{sub-juntendo750w01_T2w_softseg.json => sub-juntendo750w01_space-other_T1w_softseg.json} (100%) rename derivatives/labels_softseg/sub-juntendo750w01/anat/{sub-juntendo750w01_T1w_softseg.nii.gz => sub-juntendo750w01_space-other_T1w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-juntendo750w01/anat/{sub-juntendo750w01_flip-1_mt-on_MTS_softseg.json => sub-juntendo750w01_space-other_T2star_softseg.json} (100%) rename derivatives/labels_softseg/sub-juntendo750w01/anat/{sub-juntendo750w01_T2star_softseg.nii.gz => sub-juntendo750w01_space-other_T2star_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-juntendo750w01/anat/{sub-juntendo750w01_flip-2_mt-off_MTS_softseg.json => sub-juntendo750w01_space-other_T2w_softseg.json} (100%) rename derivatives/labels_softseg/sub-juntendo750w01/anat/{sub-juntendo750w01_T2w_softseg.nii.gz => sub-juntendo750w01_space-other_T2w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-juntendo750w02/anat/{sub-juntendo750w02_T1w_softseg.json => sub-juntendo750w02_flip-1_mt-on_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-juntendo750w02/anat/{sub-juntendo750w02_flip-1_mt-on_MTS_softseg.nii.gz => sub-juntendo750w02_flip-1_mt-on_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-juntendo750w02/anat/{sub-juntendo750w02_T2star_softseg.json => sub-juntendo750w02_flip-2_mt-off_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-juntendo750w02/anat/{sub-juntendo750w02_flip-2_mt-off_MTS_softseg.nii.gz => sub-juntendo750w02_flip-2_mt-off_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-juntendo750w02/anat/{sub-juntendo750w02_T2w_softseg.json => sub-juntendo750w02_space-other_T1w_softseg.json} (100%) rename derivatives/labels_softseg/sub-juntendo750w02/anat/{sub-juntendo750w02_T1w_softseg.nii.gz => sub-juntendo750w02_space-other_T1w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-juntendo750w02/anat/{sub-juntendo750w02_flip-1_mt-on_MTS_softseg.json => sub-juntendo750w02_space-other_T2star_softseg.json} (100%) rename derivatives/labels_softseg/sub-juntendo750w02/anat/{sub-juntendo750w02_T2star_softseg.nii.gz => sub-juntendo750w02_space-other_T2star_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-juntendo750w02/anat/{sub-juntendo750w02_flip-2_mt-off_MTS_softseg.json => sub-juntendo750w02_space-other_T2w_softseg.json} (100%) rename derivatives/labels_softseg/sub-juntendo750w02/anat/{sub-juntendo750w02_T2w_softseg.nii.gz => sub-juntendo750w02_space-other_T2w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-juntendo750w03/anat/{sub-juntendo750w03_T1w_softseg.json => sub-juntendo750w03_flip-1_mt-on_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-juntendo750w03/anat/{sub-juntendo750w03_flip-1_mt-on_MTS_softseg.nii.gz => sub-juntendo750w03_flip-1_mt-on_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-juntendo750w03/anat/{sub-juntendo750w03_T2star_softseg.json => sub-juntendo750w03_flip-2_mt-off_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-juntendo750w03/anat/{sub-juntendo750w03_flip-2_mt-off_MTS_softseg.nii.gz => sub-juntendo750w03_flip-2_mt-off_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-juntendo750w03/anat/{sub-juntendo750w03_T2w_softseg.json => sub-juntendo750w03_space-other_T1w_softseg.json} (100%) rename derivatives/labels_softseg/sub-juntendo750w03/anat/{sub-juntendo750w03_T1w_softseg.nii.gz => sub-juntendo750w03_space-other_T1w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-juntendo750w03/anat/{sub-juntendo750w03_flip-1_mt-on_MTS_softseg.json => sub-juntendo750w03_space-other_T2star_softseg.json} (100%) rename derivatives/labels_softseg/sub-juntendo750w03/anat/{sub-juntendo750w03_T2star_softseg.nii.gz => sub-juntendo750w03_space-other_T2star_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-juntendo750w03/anat/{sub-juntendo750w03_flip-2_mt-off_MTS_softseg.json => sub-juntendo750w03_space-other_T2w_softseg.json} (100%) rename derivatives/labels_softseg/sub-juntendo750w03/anat/{sub-juntendo750w03_T2w_softseg.nii.gz => sub-juntendo750w03_space-other_T2w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-juntendo750w04/anat/{sub-juntendo750w04_T1w_softseg.json => sub-juntendo750w04_flip-1_mt-on_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-juntendo750w04/anat/{sub-juntendo750w04_flip-1_mt-on_MTS_softseg.nii.gz => sub-juntendo750w04_flip-1_mt-on_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-juntendo750w04/anat/{sub-juntendo750w04_T2star_softseg.json => sub-juntendo750w04_flip-2_mt-off_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-juntendo750w04/anat/{sub-juntendo750w04_flip-2_mt-off_MTS_softseg.nii.gz => sub-juntendo750w04_flip-2_mt-off_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-juntendo750w04/anat/{sub-juntendo750w04_T2w_softseg.json => sub-juntendo750w04_space-other_T1w_softseg.json} (100%) rename derivatives/labels_softseg/sub-juntendo750w04/anat/{sub-juntendo750w04_T1w_softseg.nii.gz => sub-juntendo750w04_space-other_T1w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-juntendo750w04/anat/{sub-juntendo750w04_flip-1_mt-on_MTS_softseg.json => sub-juntendo750w04_space-other_T2star_softseg.json} (100%) rename derivatives/labels_softseg/sub-juntendo750w04/anat/{sub-juntendo750w04_T2star_softseg.nii.gz => sub-juntendo750w04_space-other_T2star_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-juntendo750w04/anat/{sub-juntendo750w04_flip-2_mt-off_MTS_softseg.json => sub-juntendo750w04_space-other_T2w_softseg.json} (100%) rename derivatives/labels_softseg/sub-juntendo750w04/anat/{sub-juntendo750w04_T2w_softseg.nii.gz => sub-juntendo750w04_space-other_T2w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-juntendo750w05/anat/{sub-juntendo750w05_flip-1_mt-on_MTS_softseg.json => sub-juntendo750w05_flip-1_mt-on_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-juntendo750w05/anat/{sub-juntendo750w05_flip-1_mt-on_MTS_softseg.nii.gz => sub-juntendo750w05_flip-1_mt-on_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-juntendo750w05/anat/{sub-juntendo750w05_flip-2_mt-off_MTS_softseg.json => sub-juntendo750w05_flip-2_mt-off_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-juntendo750w05/anat/{sub-juntendo750w05_flip-2_mt-off_MTS_softseg.nii.gz => sub-juntendo750w05_flip-2_mt-off_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-juntendo750w05/anat/{sub-juntendo750w05_T1w_softseg.json => sub-juntendo750w05_space-other_T1w_softseg.json} (100%) rename derivatives/labels_softseg/sub-juntendo750w05/anat/{sub-juntendo750w05_T1w_softseg.nii.gz => sub-juntendo750w05_space-other_T1w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-juntendo750w05/anat/{sub-juntendo750w05_T2star_softseg.json => sub-juntendo750w05_space-other_T2star_softseg.json} (100%) rename derivatives/labels_softseg/sub-juntendo750w05/anat/{sub-juntendo750w05_T2star_softseg.nii.gz => sub-juntendo750w05_space-other_T2star_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-juntendo750w05/anat/{sub-juntendo750w05_T2w_softseg.json => sub-juntendo750w05_space-other_T2w_softseg.json} (100%) rename derivatives/labels_softseg/sub-juntendo750w05/anat/{sub-juntendo750w05_T2w_softseg.nii.gz => sub-juntendo750w05_space-other_T2w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-juntendo750w06/anat/{sub-juntendo750w06_T1w_softseg.json => sub-juntendo750w06_flip-1_mt-on_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-juntendo750w06/anat/{sub-juntendo750w06_flip-1_mt-on_MTS_softseg.nii.gz => sub-juntendo750w06_flip-1_mt-on_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-juntendo750w06/anat/{sub-juntendo750w06_T2star_softseg.json => sub-juntendo750w06_flip-2_mt-off_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-juntendo750w06/anat/{sub-juntendo750w06_flip-2_mt-off_MTS_softseg.nii.gz => sub-juntendo750w06_flip-2_mt-off_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-juntendo750w06/anat/{sub-juntendo750w06_T2w_softseg.json => sub-juntendo750w06_space-other_T1w_softseg.json} (100%) rename derivatives/labels_softseg/sub-juntendo750w06/anat/{sub-juntendo750w06_T1w_softseg.nii.gz => sub-juntendo750w06_space-other_T1w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-juntendo750w06/anat/{sub-juntendo750w06_flip-1_mt-on_MTS_softseg.json => sub-juntendo750w06_space-other_T2star_softseg.json} (100%) rename derivatives/labels_softseg/sub-juntendo750w06/anat/{sub-juntendo750w06_T2star_softseg.nii.gz => sub-juntendo750w06_space-other_T2star_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-juntendo750w06/anat/{sub-juntendo750w06_flip-2_mt-off_MTS_softseg.json => sub-juntendo750w06_space-other_T2w_softseg.json} (100%) rename derivatives/labels_softseg/sub-juntendo750w06/anat/{sub-juntendo750w06_T2w_softseg.nii.gz => sub-juntendo750w06_space-other_T2w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mgh01/anat/{sub-mgh01_T1w_softseg.json => sub-mgh01_flip-1_mt-on_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-mgh01/anat/{sub-mgh01_flip-1_mt-on_MTS_softseg.nii.gz => sub-mgh01_flip-1_mt-on_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mgh01/anat/{sub-mgh01_T2star_softseg.json => sub-mgh01_flip-2_mt-off_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-mgh01/anat/{sub-mgh01_flip-2_mt-off_MTS_softseg.nii.gz => sub-mgh01_flip-2_mt-off_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mgh01/anat/{sub-mgh01_T2w_softseg.json => sub-mgh01_space-other_T1w_softseg.json} (100%) rename derivatives/labels_softseg/sub-mgh01/anat/{sub-mgh01_T1w_softseg.nii.gz => sub-mgh01_space-other_T1w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mgh01/anat/{sub-mgh01_flip-1_mt-on_MTS_softseg.json => sub-mgh01_space-other_T2star_softseg.json} (100%) rename derivatives/labels_softseg/sub-mgh01/anat/{sub-mgh01_T2star_softseg.nii.gz => sub-mgh01_space-other_T2star_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mgh01/anat/{sub-mgh01_flip-2_mt-off_MTS_softseg.json => sub-mgh01_space-other_T2w_softseg.json} (100%) rename derivatives/labels_softseg/sub-mgh01/anat/{sub-mgh01_T2w_softseg.nii.gz => sub-mgh01_space-other_T2w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mgh02/anat/{sub-mgh02_T1w_softseg.json => sub-mgh02_flip-1_mt-on_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-mgh02/anat/{sub-mgh02_flip-1_mt-on_MTS_softseg.nii.gz => sub-mgh02_flip-1_mt-on_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mgh02/anat/{sub-mgh02_T2star_softseg.json => sub-mgh02_flip-2_mt-off_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-mgh02/anat/{sub-mgh02_flip-2_mt-off_MTS_softseg.nii.gz => sub-mgh02_flip-2_mt-off_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mgh02/anat/{sub-mgh02_T2w_softseg.json => sub-mgh02_space-other_T1w_softseg.json} (100%) rename derivatives/labels_softseg/sub-mgh02/anat/{sub-mgh02_T1w_softseg.nii.gz => sub-mgh02_space-other_T1w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mgh02/anat/{sub-mgh02_flip-1_mt-on_MTS_softseg.json => sub-mgh02_space-other_T2star_softseg.json} (100%) rename derivatives/labels_softseg/sub-mgh02/anat/{sub-mgh02_T2star_softseg.nii.gz => sub-mgh02_space-other_T2star_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mgh02/anat/{sub-mgh02_flip-2_mt-off_MTS_softseg.json => sub-mgh02_space-other_T2w_softseg.json} (100%) rename derivatives/labels_softseg/sub-mgh02/anat/{sub-mgh02_T2w_softseg.nii.gz => sub-mgh02_space-other_T2w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mgh03/anat/{sub-mgh03_T1w_softseg.json => sub-mgh03_flip-1_mt-on_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-mgh03/anat/{sub-mgh03_flip-1_mt-on_MTS_softseg.nii.gz => sub-mgh03_flip-1_mt-on_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mgh03/anat/{sub-mgh03_T2star_softseg.json => sub-mgh03_flip-2_mt-off_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-mgh03/anat/{sub-mgh03_flip-2_mt-off_MTS_softseg.nii.gz => sub-mgh03_flip-2_mt-off_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mgh03/anat/{sub-mgh03_T2w_softseg.json => sub-mgh03_space-other_T1w_softseg.json} (100%) rename derivatives/labels_softseg/sub-mgh03/anat/{sub-mgh03_T1w_softseg.nii.gz => sub-mgh03_space-other_T1w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mgh03/anat/{sub-mgh03_flip-1_mt-on_MTS_softseg.json => sub-mgh03_space-other_T2star_softseg.json} (100%) rename derivatives/labels_softseg/sub-mgh03/anat/{sub-mgh03_T2star_softseg.nii.gz => sub-mgh03_space-other_T2star_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mgh03/anat/{sub-mgh03_flip-2_mt-off_MTS_softseg.json => sub-mgh03_space-other_T2w_softseg.json} (100%) rename derivatives/labels_softseg/sub-mgh03/anat/{sub-mgh03_T2w_softseg.nii.gz => sub-mgh03_space-other_T2w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mgh04/anat/{sub-mgh04_T1w_softseg.json => sub-mgh04_flip-1_mt-on_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-mgh04/anat/{sub-mgh04_flip-1_mt-on_MTS_softseg.nii.gz => sub-mgh04_flip-1_mt-on_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mgh04/anat/{sub-mgh04_T2star_softseg.json => sub-mgh04_flip-2_mt-off_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-mgh04/anat/{sub-mgh04_flip-2_mt-off_MTS_softseg.nii.gz => sub-mgh04_flip-2_mt-off_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mgh04/anat/{sub-mgh04_T2w_softseg.json => sub-mgh04_space-other_T1w_softseg.json} (100%) rename derivatives/labels_softseg/sub-mgh04/anat/{sub-mgh04_T1w_softseg.nii.gz => sub-mgh04_space-other_T1w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mgh04/anat/{sub-mgh04_flip-1_mt-on_MTS_softseg.json => sub-mgh04_space-other_T2star_softseg.json} (100%) rename derivatives/labels_softseg/sub-mgh04/anat/{sub-mgh04_T2star_softseg.nii.gz => sub-mgh04_space-other_T2star_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mgh04/anat/{sub-mgh04_flip-2_mt-off_MTS_softseg.json => sub-mgh04_space-other_T2w_softseg.json} (100%) rename derivatives/labels_softseg/sub-mgh04/anat/{sub-mgh04_T2w_softseg.nii.gz => sub-mgh04_space-other_T2w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mgh05/anat/{sub-mgh05_T1w_softseg.json => sub-mgh05_flip-1_mt-on_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-mgh05/anat/{sub-mgh05_flip-1_mt-on_MTS_softseg.nii.gz => sub-mgh05_flip-1_mt-on_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mgh05/anat/{sub-mgh05_T2star_softseg.json => sub-mgh05_flip-2_mt-off_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-mgh05/anat/{sub-mgh05_flip-2_mt-off_MTS_softseg.nii.gz => sub-mgh05_flip-2_mt-off_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mgh05/anat/{sub-mgh05_T2w_softseg.json => sub-mgh05_space-other_T1w_softseg.json} (100%) rename derivatives/labels_softseg/sub-mgh05/anat/{sub-mgh05_T1w_softseg.nii.gz => sub-mgh05_space-other_T1w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mgh05/anat/{sub-mgh05_flip-1_mt-on_MTS_softseg.json => sub-mgh05_space-other_T2star_softseg.json} (100%) rename derivatives/labels_softseg/sub-mgh05/anat/{sub-mgh05_T2star_softseg.nii.gz => sub-mgh05_space-other_T2star_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mgh05/anat/{sub-mgh05_flip-2_mt-off_MTS_softseg.json => sub-mgh05_space-other_T2w_softseg.json} (100%) rename derivatives/labels_softseg/sub-mgh05/anat/{sub-mgh05_T2w_softseg.nii.gz => sub-mgh05_space-other_T2w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mgh06/anat/{sub-mgh06_T1w_softseg.json => sub-mgh06_flip-1_mt-on_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-mgh06/anat/{sub-mgh06_flip-1_mt-on_MTS_softseg.nii.gz => sub-mgh06_flip-1_mt-on_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mgh06/anat/{sub-mgh06_T2star_softseg.json => sub-mgh06_flip-2_mt-off_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-mgh06/anat/{sub-mgh06_flip-2_mt-off_MTS_softseg.nii.gz => sub-mgh06_flip-2_mt-off_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mgh06/anat/{sub-mgh06_T2w_softseg.json => sub-mgh06_space-other_T1w_softseg.json} (100%) rename derivatives/labels_softseg/sub-mgh06/anat/{sub-mgh06_T1w_softseg.nii.gz => sub-mgh06_space-other_T1w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mgh06/anat/{sub-mgh06_flip-1_mt-on_MTS_softseg.json => sub-mgh06_space-other_T2star_softseg.json} (100%) rename derivatives/labels_softseg/sub-mgh06/anat/{sub-mgh06_T2star_softseg.nii.gz => sub-mgh06_space-other_T2star_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mgh06/anat/{sub-mgh06_flip-2_mt-off_MTS_softseg.json => sub-mgh06_space-other_T2w_softseg.json} (100%) rename derivatives/labels_softseg/sub-mgh06/anat/{sub-mgh06_T2w_softseg.nii.gz => sub-mgh06_space-other_T2w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-milan01/anat/{sub-milan01_T1w_softseg.json => sub-milan01_flip-1_mt-on_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-milan01/anat/{sub-milan01_flip-1_mt-on_MTS_softseg.nii.gz => sub-milan01_flip-1_mt-on_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-milan01/anat/{sub-milan01_T2star_softseg.json => sub-milan01_flip-2_mt-off_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-milan01/anat/{sub-milan01_flip-2_mt-off_MTS_softseg.nii.gz => sub-milan01_flip-2_mt-off_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-milan01/anat/{sub-milan01_T2w_softseg.json => sub-milan01_space-other_T1w_softseg.json} (100%) rename derivatives/labels_softseg/sub-milan01/anat/{sub-milan01_T1w_softseg.nii.gz => sub-milan01_space-other_T1w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-milan01/anat/{sub-milan01_flip-1_mt-on_MTS_softseg.json => sub-milan01_space-other_T2star_softseg.json} (100%) rename derivatives/labels_softseg/sub-milan01/anat/{sub-milan01_T2star_softseg.nii.gz => sub-milan01_space-other_T2star_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-milan01/anat/{sub-milan01_flip-2_mt-off_MTS_softseg.json => sub-milan01_space-other_T2w_softseg.json} (100%) rename derivatives/labels_softseg/sub-milan01/anat/{sub-milan01_T2w_softseg.nii.gz => sub-milan01_space-other_T2w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-milan02/anat/{sub-milan02_T1w_softseg.json => sub-milan02_flip-1_mt-on_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-milan02/anat/{sub-milan02_flip-1_mt-on_MTS_softseg.nii.gz => sub-milan02_flip-1_mt-on_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-milan02/anat/{sub-milan02_T2star_softseg.json => sub-milan02_flip-2_mt-off_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-milan02/anat/{sub-milan02_flip-2_mt-off_MTS_softseg.nii.gz => sub-milan02_flip-2_mt-off_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-milan02/anat/{sub-milan02_T2w_softseg.json => sub-milan02_space-other_T1w_softseg.json} (100%) rename derivatives/labels_softseg/sub-milan02/anat/{sub-milan02_T1w_softseg.nii.gz => sub-milan02_space-other_T1w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-milan02/anat/{sub-milan02_flip-1_mt-on_MTS_softseg.json => sub-milan02_space-other_T2star_softseg.json} (100%) rename derivatives/labels_softseg/sub-milan02/anat/{sub-milan02_T2star_softseg.nii.gz => sub-milan02_space-other_T2star_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-milan02/anat/{sub-milan02_flip-2_mt-off_MTS_softseg.json => sub-milan02_space-other_T2w_softseg.json} (100%) rename derivatives/labels_softseg/sub-milan02/anat/{sub-milan02_T2w_softseg.nii.gz => sub-milan02_space-other_T2w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-milan03/anat/{sub-milan03_T1w_softseg.json => sub-milan03_flip-1_mt-on_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-milan03/anat/{sub-milan03_flip-1_mt-on_MTS_softseg.nii.gz => sub-milan03_flip-1_mt-on_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-milan03/anat/{sub-milan03_T2star_softseg.json => sub-milan03_flip-2_mt-off_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-milan03/anat/{sub-milan03_flip-2_mt-off_MTS_softseg.nii.gz => sub-milan03_flip-2_mt-off_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-milan03/anat/{sub-milan03_T2w_softseg.json => sub-milan03_space-other_T1w_softseg.json} (100%) rename derivatives/labels_softseg/sub-milan03/anat/{sub-milan03_T1w_softseg.nii.gz => sub-milan03_space-other_T1w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-milan03/anat/{sub-milan03_flip-1_mt-on_MTS_softseg.json => sub-milan03_space-other_T2star_softseg.json} (100%) rename derivatives/labels_softseg/sub-milan03/anat/{sub-milan03_T2star_softseg.nii.gz => sub-milan03_space-other_T2star_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-milan03/anat/{sub-milan03_flip-2_mt-off_MTS_softseg.json => sub-milan03_space-other_T2w_softseg.json} (100%) rename derivatives/labels_softseg/sub-milan03/anat/{sub-milan03_T2w_softseg.nii.gz => sub-milan03_space-other_T2w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-milan04/anat/{sub-milan04_T1w_softseg.json => sub-milan04_flip-1_mt-on_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-milan04/anat/{sub-milan04_flip-1_mt-on_MTS_softseg.nii.gz => sub-milan04_flip-1_mt-on_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-milan04/anat/{sub-milan04_T2star_softseg.json => sub-milan04_flip-2_mt-off_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-milan04/anat/{sub-milan04_flip-2_mt-off_MTS_softseg.nii.gz => sub-milan04_flip-2_mt-off_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-milan04/anat/{sub-milan04_T2w_softseg.json => sub-milan04_space-other_T1w_softseg.json} (100%) rename derivatives/labels_softseg/sub-milan04/anat/{sub-milan04_T1w_softseg.nii.gz => sub-milan04_space-other_T1w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-milan04/anat/{sub-milan04_flip-1_mt-on_MTS_softseg.json => sub-milan04_space-other_T2star_softseg.json} (100%) rename derivatives/labels_softseg/sub-milan04/anat/{sub-milan04_T2star_softseg.nii.gz => sub-milan04_space-other_T2star_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-milan04/anat/{sub-milan04_flip-2_mt-off_MTS_softseg.json => sub-milan04_space-other_T2w_softseg.json} (100%) rename derivatives/labels_softseg/sub-milan04/anat/{sub-milan04_T2w_softseg.nii.gz => sub-milan04_space-other_T2w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-milan05/anat/{sub-milan05_T1w_softseg.json => sub-milan05_flip-1_mt-on_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-milan05/anat/{sub-milan05_flip-1_mt-on_MTS_softseg.nii.gz => sub-milan05_flip-1_mt-on_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-milan05/anat/{sub-milan05_T2star_softseg.json => sub-milan05_flip-2_mt-off_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-milan05/anat/{sub-milan05_flip-2_mt-off_MTS_softseg.nii.gz => sub-milan05_flip-2_mt-off_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-milan05/anat/{sub-milan05_T2w_softseg.json => sub-milan05_space-other_T1w_softseg.json} (100%) rename derivatives/labels_softseg/sub-milan05/anat/{sub-milan05_T1w_softseg.nii.gz => sub-milan05_space-other_T1w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-milan05/anat/{sub-milan05_flip-1_mt-on_MTS_softseg.json => sub-milan05_space-other_T2star_softseg.json} (100%) rename derivatives/labels_softseg/sub-milan05/anat/{sub-milan05_T2star_softseg.nii.gz => sub-milan05_space-other_T2star_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-milan05/anat/{sub-milan05_flip-2_mt-off_MTS_softseg.json => sub-milan05_space-other_T2w_softseg.json} (100%) rename derivatives/labels_softseg/sub-milan05/anat/{sub-milan05_T2w_softseg.nii.gz => sub-milan05_space-other_T2w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-milan06/anat/{sub-milan06_T1w_softseg.json => sub-milan06_flip-1_mt-on_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-milan06/anat/{sub-milan06_flip-1_mt-on_MTS_softseg.nii.gz => sub-milan06_flip-1_mt-on_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-milan06/anat/{sub-milan06_T2star_softseg.json => sub-milan06_flip-2_mt-off_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-milan06/anat/{sub-milan06_flip-2_mt-off_MTS_softseg.nii.gz => sub-milan06_flip-2_mt-off_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-milan06/anat/{sub-milan06_T2w_softseg.json => sub-milan06_space-other_T1w_softseg.json} (100%) rename derivatives/labels_softseg/sub-milan06/anat/{sub-milan06_T1w_softseg.nii.gz => sub-milan06_space-other_T1w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-milan06/anat/{sub-milan06_flip-1_mt-on_MTS_softseg.json => sub-milan06_space-other_T2star_softseg.json} (100%) rename derivatives/labels_softseg/sub-milan06/anat/{sub-milan06_T2star_softseg.nii.gz => sub-milan06_space-other_T2star_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-milan06/anat/{sub-milan06_flip-2_mt-off_MTS_softseg.json => sub-milan06_space-other_T2w_softseg.json} (100%) rename derivatives/labels_softseg/sub-milan06/anat/{sub-milan06_T2w_softseg.nii.gz => sub-milan06_space-other_T2w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-milan07/anat/{sub-milan07_T1w_softseg.json => sub-milan07_flip-1_mt-on_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-milan07/anat/{sub-milan07_flip-1_mt-on_MTS_softseg.nii.gz => sub-milan07_flip-1_mt-on_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-milan07/anat/{sub-milan07_T2star_softseg.json => sub-milan07_flip-2_mt-off_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-milan07/anat/{sub-milan07_flip-2_mt-off_MTS_softseg.nii.gz => sub-milan07_flip-2_mt-off_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-milan07/anat/{sub-milan07_T2w_softseg.json => sub-milan07_space-other_T1w_softseg.json} (100%) rename derivatives/labels_softseg/sub-milan07/anat/{sub-milan07_T1w_softseg.nii.gz => sub-milan07_space-other_T1w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-milan07/anat/{sub-milan07_flip-1_mt-on_MTS_softseg.json => sub-milan07_space-other_T2star_softseg.json} (100%) rename derivatives/labels_softseg/sub-milan07/anat/{sub-milan07_T2star_softseg.nii.gz => sub-milan07_space-other_T2star_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-milan07/anat/{sub-milan07_flip-2_mt-off_MTS_softseg.json => sub-milan07_space-other_T2w_softseg.json} (100%) rename derivatives/labels_softseg/sub-milan07/anat/{sub-milan07_T2w_softseg.nii.gz => sub-milan07_space-other_T2w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mniPilot1/anat/{sub-mniPilot1_T1w_softseg.json => sub-mniPilot1_flip-1_mt-on_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-mniPilot1/anat/{sub-mniPilot1_flip-1_mt-on_MTS_softseg.nii.gz => sub-mniPilot1_flip-1_mt-on_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mniPilot1/anat/{sub-mniPilot1_flip-1_mt-on_MTS_softseg.json => sub-mniPilot1_flip-2_mt-off_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-mniPilot1/anat/{sub-mniPilot1_flip-2_mt-off_MTS_softseg.nii.gz => sub-mniPilot1_flip-2_mt-off_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mniPilot1/anat/{sub-mniPilot1_flip-2_mt-off_MTS_softseg.json => sub-mniPilot1_space-other_T1w_softseg.json} (100%) rename derivatives/labels_softseg/sub-mniPilot1/anat/{sub-mniPilot1_T1w_softseg.nii.gz => sub-mniPilot1_space-other_T1w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mniPilot1/anat/{sub-mniPilot1_T2star_softseg.json => sub-mniPilot1_space-other_T2star_softseg.json} (100%) rename derivatives/labels_softseg/sub-mniPilot1/anat/{sub-mniPilot1_T2star_softseg.nii.gz => sub-mniPilot1_space-other_T2star_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mniPilot1/anat/{sub-mniPilot1_T2w_softseg.json => sub-mniPilot1_space-other_T2w_softseg.json} (100%) rename derivatives/labels_softseg/sub-mniPilot1/anat/{sub-mniPilot1_T2w_softseg.nii.gz => sub-mniPilot1_space-other_T2w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mniS01/anat/{sub-mniS01_T1w_softseg.json => sub-mniS01_flip-1_mt-on_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-mniS01/anat/{sub-mniS01_flip-1_mt-on_MTS_softseg.nii.gz => sub-mniS01_flip-1_mt-on_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mniS01/anat/{sub-mniS01_T2star_softseg.json => sub-mniS01_flip-2_mt-off_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-mniS01/anat/{sub-mniS01_flip-2_mt-off_MTS_softseg.nii.gz => sub-mniS01_flip-2_mt-off_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mniS01/anat/{sub-mniS01_T2w_softseg.json => sub-mniS01_space-other_T1w_softseg.json} (100%) rename derivatives/labels_softseg/sub-mniS01/anat/{sub-mniS01_T1w_softseg.nii.gz => sub-mniS01_space-other_T1w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mniS01/anat/{sub-mniS01_flip-1_mt-on_MTS_softseg.json => sub-mniS01_space-other_T2star_softseg.json} (100%) rename derivatives/labels_softseg/sub-mniS01/anat/{sub-mniS01_T2star_softseg.nii.gz => sub-mniS01_space-other_T2star_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mniS01/anat/{sub-mniS01_flip-2_mt-off_MTS_softseg.json => sub-mniS01_space-other_T2w_softseg.json} (100%) rename derivatives/labels_softseg/sub-mniS01/anat/{sub-mniS01_T2w_softseg.nii.gz => sub-mniS01_space-other_T2w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mniS02/anat/{sub-mniS02_T1w_softseg.json => sub-mniS02_flip-1_mt-on_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-mniS02/anat/{sub-mniS02_flip-1_mt-on_MTS_softseg.nii.gz => sub-mniS02_flip-1_mt-on_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mniS02/anat/{sub-mniS02_T2star_softseg.json => sub-mniS02_flip-2_mt-off_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-mniS02/anat/{sub-mniS02_flip-2_mt-off_MTS_softseg.nii.gz => sub-mniS02_flip-2_mt-off_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mniS02/anat/{sub-mniS02_T2w_softseg.json => sub-mniS02_space-other_T1w_softseg.json} (100%) rename derivatives/labels_softseg/sub-mniS02/anat/{sub-mniS02_T1w_softseg.nii.gz => sub-mniS02_space-other_T1w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mniS02/anat/{sub-mniS02_flip-1_mt-on_MTS_softseg.json => sub-mniS02_space-other_T2star_softseg.json} (100%) rename derivatives/labels_softseg/sub-mniS02/anat/{sub-mniS02_T2star_softseg.nii.gz => sub-mniS02_space-other_T2star_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mniS02/anat/{sub-mniS02_flip-2_mt-off_MTS_softseg.json => sub-mniS02_space-other_T2w_softseg.json} (100%) rename derivatives/labels_softseg/sub-mniS02/anat/{sub-mniS02_T2w_softseg.nii.gz => sub-mniS02_space-other_T2w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mniS03/anat/{sub-mniS03_T1w_softseg.json => sub-mniS03_flip-1_mt-on_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-mniS03/anat/{sub-mniS03_flip-1_mt-on_MTS_softseg.nii.gz => sub-mniS03_flip-1_mt-on_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mniS03/anat/{sub-mniS03_T2star_softseg.json => sub-mniS03_flip-2_mt-off_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-mniS03/anat/{sub-mniS03_flip-2_mt-off_MTS_softseg.nii.gz => sub-mniS03_flip-2_mt-off_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mniS03/anat/{sub-mniS03_T2w_softseg.json => sub-mniS03_space-other_T1w_softseg.json} (100%) rename derivatives/labels_softseg/sub-mniS03/anat/{sub-mniS03_T1w_softseg.nii.gz => sub-mniS03_space-other_T1w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mniS03/anat/{sub-mniS03_flip-1_mt-on_MTS_softseg.json => sub-mniS03_space-other_T2star_softseg.json} (100%) rename derivatives/labels_softseg/sub-mniS03/anat/{sub-mniS03_T2star_softseg.nii.gz => sub-mniS03_space-other_T2star_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mniS03/anat/{sub-mniS03_flip-2_mt-off_MTS_softseg.json => sub-mniS03_space-other_T2w_softseg.json} (100%) rename derivatives/labels_softseg/sub-mniS03/anat/{sub-mniS03_T2w_softseg.nii.gz => sub-mniS03_space-other_T2w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mniS04/anat/{sub-mniS04_flip-1_mt-on_MTS_softseg.json => sub-mniS04_flip-1_mt-on_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-mniS04/anat/{sub-mniS04_flip-1_mt-on_MTS_softseg.nii.gz => sub-mniS04_flip-1_mt-on_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mniS04/anat/{sub-mniS04_flip-2_mt-off_MTS_softseg.json => sub-mniS04_flip-2_mt-off_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-mniS04/anat/{sub-mniS04_flip-2_mt-off_MTS_softseg.nii.gz => sub-mniS04_flip-2_mt-off_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mniS04/anat/{sub-mniS04_T1w_softseg.json => sub-mniS04_space-other_T1w_softseg.json} (100%) rename derivatives/labels_softseg/sub-mniS04/anat/{sub-mniS04_T1w_softseg.nii.gz => sub-mniS04_space-other_T1w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mniS04/anat/{sub-mniS04_T2star_softseg.json => sub-mniS04_space-other_T2star_softseg.json} (100%) rename derivatives/labels_softseg/sub-mniS04/anat/{sub-mniS04_T2star_softseg.nii.gz => sub-mniS04_space-other_T2star_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mniS04/anat/{sub-mniS04_T2w_softseg.json => sub-mniS04_space-other_T2w_softseg.json} (100%) rename derivatives/labels_softseg/sub-mniS04/anat/{sub-mniS04_T2w_softseg.nii.gz => sub-mniS04_space-other_T2w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mniS05/anat/{sub-mniS05_T1w_softseg.json => sub-mniS05_flip-1_mt-on_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-mniS05/anat/{sub-mniS05_flip-1_mt-on_MTS_softseg.nii.gz => sub-mniS05_flip-1_mt-on_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mniS05/anat/{sub-mniS05_T2star_softseg.json => sub-mniS05_flip-2_mt-off_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-mniS05/anat/{sub-mniS05_flip-2_mt-off_MTS_softseg.nii.gz => sub-mniS05_flip-2_mt-off_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mniS05/anat/{sub-mniS05_T2w_softseg.json => sub-mniS05_space-other_T1w_softseg.json} (100%) rename derivatives/labels_softseg/sub-mniS05/anat/{sub-mniS05_T1w_softseg.nii.gz => sub-mniS05_space-other_T1w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mniS05/anat/{sub-mniS05_flip-1_mt-on_MTS_softseg.json => sub-mniS05_space-other_T2star_softseg.json} (100%) rename derivatives/labels_softseg/sub-mniS05/anat/{sub-mniS05_T2star_softseg.nii.gz => sub-mniS05_space-other_T2star_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mniS05/anat/{sub-mniS05_flip-2_mt-off_MTS_softseg.json => sub-mniS05_space-other_T2w_softseg.json} (100%) rename derivatives/labels_softseg/sub-mniS05/anat/{sub-mniS05_T2w_softseg.nii.gz => sub-mniS05_space-other_T2w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mniS06/anat/{sub-mniS06_T1w_softseg.json => sub-mniS06_flip-1_mt-on_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-mniS06/anat/{sub-mniS06_flip-1_mt-on_MTS_softseg.nii.gz => sub-mniS06_flip-1_mt-on_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mniS06/anat/{sub-mniS06_T2star_softseg.json => sub-mniS06_flip-2_mt-off_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-mniS06/anat/{sub-mniS06_flip-2_mt-off_MTS_softseg.nii.gz => sub-mniS06_flip-2_mt-off_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mniS06/anat/{sub-mniS06_T2w_softseg.json => sub-mniS06_space-other_T1w_softseg.json} (100%) rename derivatives/labels_softseg/sub-mniS06/anat/{sub-mniS06_T1w_softseg.nii.gz => sub-mniS06_space-other_T1w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mniS06/anat/{sub-mniS06_flip-1_mt-on_MTS_softseg.json => sub-mniS06_space-other_T2star_softseg.json} (100%) rename derivatives/labels_softseg/sub-mniS06/anat/{sub-mniS06_T2star_softseg.nii.gz => sub-mniS06_space-other_T2star_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mniS06/anat/{sub-mniS06_flip-2_mt-off_MTS_softseg.json => sub-mniS06_space-other_T2w_softseg.json} (100%) rename derivatives/labels_softseg/sub-mniS06/anat/{sub-mniS06_T2w_softseg.nii.gz => sub-mniS06_space-other_T2w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mniS07/anat/{sub-mniS07_T1w_softseg.json => sub-mniS07_flip-1_mt-on_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-mniS07/anat/{sub-mniS07_flip-1_mt-on_MTS_softseg.nii.gz => sub-mniS07_flip-1_mt-on_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mniS07/anat/{sub-mniS07_T2star_softseg.json => sub-mniS07_flip-2_mt-off_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-mniS07/anat/{sub-mniS07_flip-2_mt-off_MTS_softseg.nii.gz => sub-mniS07_flip-2_mt-off_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mniS07/anat/{sub-mniS07_T2w_softseg.json => sub-mniS07_space-other_T1w_softseg.json} (100%) rename derivatives/labels_softseg/sub-mniS07/anat/{sub-mniS07_T1w_softseg.nii.gz => sub-mniS07_space-other_T1w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mniS07/anat/{sub-mniS07_flip-1_mt-on_MTS_softseg.json => sub-mniS07_space-other_T2star_softseg.json} (100%) rename derivatives/labels_softseg/sub-mniS07/anat/{sub-mniS07_T2star_softseg.nii.gz => sub-mniS07_space-other_T2star_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mniS07/anat/{sub-mniS07_flip-2_mt-off_MTS_softseg.json => sub-mniS07_space-other_T2w_softseg.json} (100%) rename derivatives/labels_softseg/sub-mniS07/anat/{sub-mniS07_T2w_softseg.nii.gz => sub-mniS07_space-other_T2w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mniS08/anat/{sub-mniS08_flip-1_mt-on_MTS_softseg.json => sub-mniS08_flip-1_mt-on_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-mniS08/anat/{sub-mniS08_flip-1_mt-on_MTS_softseg.nii.gz => sub-mniS08_flip-1_mt-on_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mniS08/anat/{sub-mniS08_T1w_softseg.json => sub-mniS08_flip-2_mt-off_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-mniS08/anat/{sub-mniS08_flip-2_mt-off_MTS_softseg.nii.gz => sub-mniS08_flip-2_mt-off_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mniS08/anat/{sub-mniS08_T2star_softseg.json => sub-mniS08_space-other_T1w_softseg.json} (100%) rename derivatives/labels_softseg/sub-mniS08/anat/{sub-mniS08_T1w_softseg.nii.gz => sub-mniS08_space-other_T1w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mniS08/anat/{sub-mniS08_T2w_softseg.json => sub-mniS08_space-other_T2star_softseg.json} (100%) rename derivatives/labels_softseg/sub-mniS08/anat/{sub-mniS08_T2star_softseg.nii.gz => sub-mniS08_space-other_T2star_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mniS08/anat/{sub-mniS08_flip-2_mt-off_MTS_softseg.json => sub-mniS08_space-other_T2w_softseg.json} (100%) rename derivatives/labels_softseg/sub-mniS08/anat/{sub-mniS08_T2w_softseg.nii.gz => sub-mniS08_space-other_T2w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mniS09/anat/{sub-mniS09_T1w_softseg.json => sub-mniS09_flip-1_mt-on_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-mniS09/anat/{sub-mniS09_flip-1_mt-on_MTS_softseg.nii.gz => sub-mniS09_flip-1_mt-on_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mniS09/anat/{sub-mniS09_T2star_softseg.json => sub-mniS09_flip-2_mt-off_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-mniS09/anat/{sub-mniS09_flip-2_mt-off_MTS_softseg.nii.gz => sub-mniS09_flip-2_mt-off_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mniS09/anat/{sub-mniS09_T2w_softseg.json => sub-mniS09_space-other_T1w_softseg.json} (100%) rename derivatives/labels_softseg/sub-mniS09/anat/{sub-mniS09_T1w_softseg.nii.gz => sub-mniS09_space-other_T1w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mniS09/anat/{sub-mniS09_flip-1_mt-on_MTS_softseg.json => sub-mniS09_space-other_T2star_softseg.json} (100%) rename derivatives/labels_softseg/sub-mniS09/anat/{sub-mniS09_T2star_softseg.nii.gz => sub-mniS09_space-other_T2star_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mniS09/anat/{sub-mniS09_flip-2_mt-off_MTS_softseg.json => sub-mniS09_space-other_T2w_softseg.json} (100%) rename derivatives/labels_softseg/sub-mniS09/anat/{sub-mniS09_T2w_softseg.nii.gz => sub-mniS09_space-other_T2w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mountSinai01/anat/{sub-mountSinai01_T1w_softseg.json => sub-mountSinai01_flip-1_mt-on_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-mountSinai01/anat/{sub-mountSinai01_flip-1_mt-on_MTS_softseg.nii.gz => sub-mountSinai01_flip-1_mt-on_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mountSinai01/anat/{sub-mountSinai01_T2star_softseg.json => sub-mountSinai01_flip-2_mt-off_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-mountSinai01/anat/{sub-mountSinai01_flip-2_mt-off_MTS_softseg.nii.gz => sub-mountSinai01_flip-2_mt-off_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mountSinai01/anat/{sub-mountSinai01_T2w_softseg.json => sub-mountSinai01_space-other_T1w_softseg.json} (100%) rename derivatives/labels_softseg/sub-mountSinai01/anat/{sub-mountSinai01_T1w_softseg.nii.gz => sub-mountSinai01_space-other_T1w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mountSinai01/anat/{sub-mountSinai01_flip-1_mt-on_MTS_softseg.json => sub-mountSinai01_space-other_T2star_softseg.json} (100%) rename derivatives/labels_softseg/sub-mountSinai01/anat/{sub-mountSinai01_T2star_softseg.nii.gz => sub-mountSinai01_space-other_T2star_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mountSinai01/anat/{sub-mountSinai01_flip-2_mt-off_MTS_softseg.json => sub-mountSinai01_space-other_T2w_softseg.json} (100%) rename derivatives/labels_softseg/sub-mountSinai01/anat/{sub-mountSinai01_T2w_softseg.nii.gz => sub-mountSinai01_space-other_T2w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mountSinai02/anat/{sub-mountSinai02_T1w_softseg.json => sub-mountSinai02_flip-1_mt-on_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-mountSinai02/anat/{sub-mountSinai02_flip-1_mt-on_MTS_softseg.nii.gz => sub-mountSinai02_flip-1_mt-on_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mountSinai02/anat/{sub-mountSinai02_T2star_softseg.json => sub-mountSinai02_flip-2_mt-off_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-mountSinai02/anat/{sub-mountSinai02_flip-2_mt-off_MTS_softseg.nii.gz => sub-mountSinai02_flip-2_mt-off_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mountSinai02/anat/{sub-mountSinai02_T2w_softseg.json => sub-mountSinai02_space-other_T1w_softseg.json} (100%) rename derivatives/labels_softseg/sub-mountSinai02/anat/{sub-mountSinai02_T1w_softseg.nii.gz => sub-mountSinai02_space-other_T1w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mountSinai02/anat/{sub-mountSinai02_flip-1_mt-on_MTS_softseg.json => sub-mountSinai02_space-other_T2star_softseg.json} (100%) rename derivatives/labels_softseg/sub-mountSinai02/anat/{sub-mountSinai02_T2star_softseg.nii.gz => sub-mountSinai02_space-other_T2star_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mountSinai02/anat/{sub-mountSinai02_flip-2_mt-off_MTS_softseg.json => sub-mountSinai02_space-other_T2w_softseg.json} (100%) rename derivatives/labels_softseg/sub-mountSinai02/anat/{sub-mountSinai02_T2w_softseg.nii.gz => sub-mountSinai02_space-other_T2w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mountSinai04/anat/{sub-mountSinai04_T1w_softseg.json => sub-mountSinai04_flip-1_mt-on_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-mountSinai04/anat/{sub-mountSinai04_flip-1_mt-on_MTS_softseg.nii.gz => sub-mountSinai04_flip-1_mt-on_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mountSinai04/anat/{sub-mountSinai04_T2star_softseg.json => sub-mountSinai04_flip-2_mt-off_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-mountSinai04/anat/{sub-mountSinai04_flip-2_mt-off_MTS_softseg.nii.gz => sub-mountSinai04_flip-2_mt-off_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mountSinai04/anat/{sub-mountSinai04_T2w_softseg.json => sub-mountSinai04_space-other_T1w_softseg.json} (100%) rename derivatives/labels_softseg/sub-mountSinai04/anat/{sub-mountSinai04_T1w_softseg.nii.gz => sub-mountSinai04_space-other_T1w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mountSinai04/anat/{sub-mountSinai04_flip-1_mt-on_MTS_softseg.json => sub-mountSinai04_space-other_T2star_softseg.json} (100%) rename derivatives/labels_softseg/sub-mountSinai04/anat/{sub-mountSinai04_T2star_softseg.nii.gz => sub-mountSinai04_space-other_T2star_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mountSinai04/anat/{sub-mountSinai04_flip-2_mt-off_MTS_softseg.json => sub-mountSinai04_space-other_T2w_softseg.json} (100%) rename derivatives/labels_softseg/sub-mountSinai04/anat/{sub-mountSinai04_T2w_softseg.nii.gz => sub-mountSinai04_space-other_T2w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mountSinai05/anat/{sub-mountSinai05_T1w_softseg.json => sub-mountSinai05_flip-1_mt-on_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-mountSinai05/anat/{sub-mountSinai05_flip-1_mt-on_MTS_softseg.nii.gz => sub-mountSinai05_flip-1_mt-on_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mountSinai05/anat/{sub-mountSinai05_T2star_softseg.json => sub-mountSinai05_flip-2_mt-off_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-mountSinai05/anat/{sub-mountSinai05_flip-2_mt-off_MTS_softseg.nii.gz => sub-mountSinai05_flip-2_mt-off_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mountSinai05/anat/{sub-mountSinai05_T2w_softseg.json => sub-mountSinai05_space-other_T1w_softseg.json} (100%) rename derivatives/labels_softseg/sub-mountSinai05/anat/{sub-mountSinai05_T1w_softseg.nii.gz => sub-mountSinai05_space-other_T1w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mountSinai05/anat/{sub-mountSinai05_flip-1_mt-on_MTS_softseg.json => sub-mountSinai05_space-other_T2star_softseg.json} (100%) rename derivatives/labels_softseg/sub-mountSinai05/anat/{sub-mountSinai05_T2star_softseg.nii.gz => sub-mountSinai05_space-other_T2star_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mountSinai05/anat/{sub-mountSinai05_flip-2_mt-off_MTS_softseg.json => sub-mountSinai05_space-other_T2w_softseg.json} (100%) rename derivatives/labels_softseg/sub-mountSinai05/anat/{sub-mountSinai05_T2w_softseg.nii.gz => sub-mountSinai05_space-other_T2w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mountSinai06/anat/{sub-mountSinai06_T1w_softseg.json => sub-mountSinai06_flip-1_mt-on_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-mountSinai06/anat/{sub-mountSinai06_flip-1_mt-on_MTS_softseg.nii.gz => sub-mountSinai06_flip-1_mt-on_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mountSinai06/anat/{sub-mountSinai06_T2star_softseg.json => sub-mountSinai06_flip-2_mt-off_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-mountSinai06/anat/{sub-mountSinai06_flip-2_mt-off_MTS_softseg.nii.gz => sub-mountSinai06_flip-2_mt-off_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mountSinai06/anat/{sub-mountSinai06_T2w_softseg.json => sub-mountSinai06_space-other_T1w_softseg.json} (100%) rename derivatives/labels_softseg/sub-mountSinai06/anat/{sub-mountSinai06_T1w_softseg.nii.gz => sub-mountSinai06_space-other_T1w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mountSinai06/anat/{sub-mountSinai06_flip-1_mt-on_MTS_softseg.json => sub-mountSinai06_space-other_T2star_softseg.json} (100%) rename derivatives/labels_softseg/sub-mountSinai06/anat/{sub-mountSinai06_T2star_softseg.nii.gz => sub-mountSinai06_space-other_T2star_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mountSinai06/anat/{sub-mountSinai06_flip-2_mt-off_MTS_softseg.json => sub-mountSinai06_space-other_T2w_softseg.json} (100%) rename derivatives/labels_softseg/sub-mountSinai06/anat/{sub-mountSinai06_T2w_softseg.nii.gz => sub-mountSinai06_space-other_T2w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mpicbs01/anat/{sub-mpicbs01_T1w_softseg.json => sub-mpicbs01_flip-1_mt-on_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-mpicbs01/anat/{sub-mpicbs01_flip-1_mt-on_MTS_softseg.nii.gz => sub-mpicbs01_flip-1_mt-on_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mpicbs01/anat/{sub-mpicbs01_T2star_softseg.json => sub-mpicbs01_flip-2_mt-off_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-mpicbs01/anat/{sub-mpicbs01_flip-2_mt-off_MTS_softseg.nii.gz => sub-mpicbs01_flip-2_mt-off_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mpicbs01/anat/{sub-mpicbs01_T2w_softseg.json => sub-mpicbs01_space-other_T1w_softseg.json} (100%) rename derivatives/labels_softseg/sub-mpicbs01/anat/{sub-mpicbs01_T1w_softseg.nii.gz => sub-mpicbs01_space-other_T1w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mpicbs01/anat/{sub-mpicbs01_flip-1_mt-on_MTS_softseg.json => sub-mpicbs01_space-other_T2star_softseg.json} (100%) rename derivatives/labels_softseg/sub-mpicbs01/anat/{sub-mpicbs01_T2star_softseg.nii.gz => sub-mpicbs01_space-other_T2star_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mpicbs01/anat/{sub-mpicbs01_flip-2_mt-off_MTS_softseg.json => sub-mpicbs01_space-other_T2w_softseg.json} (100%) rename derivatives/labels_softseg/sub-mpicbs01/anat/{sub-mpicbs01_T2w_softseg.nii.gz => sub-mpicbs01_space-other_T2w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mpicbs02/anat/{sub-mpicbs02_T1w_softseg.json => sub-mpicbs02_flip-1_mt-on_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-mpicbs02/anat/{sub-mpicbs02_flip-1_mt-on_MTS_softseg.nii.gz => sub-mpicbs02_flip-1_mt-on_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mpicbs02/anat/{sub-mpicbs02_T2star_softseg.json => sub-mpicbs02_flip-2_mt-off_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-mpicbs02/anat/{sub-mpicbs02_flip-2_mt-off_MTS_softseg.nii.gz => sub-mpicbs02_flip-2_mt-off_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mpicbs02/anat/{sub-mpicbs02_T2w_softseg.json => sub-mpicbs02_space-other_T1w_softseg.json} (100%) rename derivatives/labels_softseg/sub-mpicbs02/anat/{sub-mpicbs02_T1w_softseg.nii.gz => sub-mpicbs02_space-other_T1w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mpicbs02/anat/{sub-mpicbs02_flip-1_mt-on_MTS_softseg.json => sub-mpicbs02_space-other_T2star_softseg.json} (100%) rename derivatives/labels_softseg/sub-mpicbs02/anat/{sub-mpicbs02_T2star_softseg.nii.gz => sub-mpicbs02_space-other_T2star_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mpicbs02/anat/{sub-mpicbs02_flip-2_mt-off_MTS_softseg.json => sub-mpicbs02_space-other_T2w_softseg.json} (100%) rename derivatives/labels_softseg/sub-mpicbs02/anat/{sub-mpicbs02_T2w_softseg.nii.gz => sub-mpicbs02_space-other_T2w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mpicbs03/anat/{sub-mpicbs03_T1w_softseg.json => sub-mpicbs03_flip-1_mt-on_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-mpicbs03/anat/{sub-mpicbs03_flip-1_mt-on_MTS_softseg.nii.gz => sub-mpicbs03_flip-1_mt-on_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mpicbs03/anat/{sub-mpicbs03_T2star_softseg.json => sub-mpicbs03_flip-2_mt-off_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-mpicbs03/anat/{sub-mpicbs03_flip-2_mt-off_MTS_softseg.nii.gz => sub-mpicbs03_flip-2_mt-off_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mpicbs03/anat/{sub-mpicbs03_T2w_softseg.json => sub-mpicbs03_space-other_T1w_softseg.json} (100%) rename derivatives/labels_softseg/sub-mpicbs03/anat/{sub-mpicbs03_T1w_softseg.nii.gz => sub-mpicbs03_space-other_T1w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mpicbs03/anat/{sub-mpicbs03_flip-1_mt-on_MTS_softseg.json => sub-mpicbs03_space-other_T2star_softseg.json} (100%) rename derivatives/labels_softseg/sub-mpicbs03/anat/{sub-mpicbs03_T2star_softseg.nii.gz => sub-mpicbs03_space-other_T2star_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mpicbs03/anat/{sub-mpicbs03_flip-2_mt-off_MTS_softseg.json => sub-mpicbs03_space-other_T2w_softseg.json} (100%) rename derivatives/labels_softseg/sub-mpicbs03/anat/{sub-mpicbs03_T2w_softseg.nii.gz => sub-mpicbs03_space-other_T2w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mpicbs05/anat/{sub-mpicbs05_T1w_softseg.json => sub-mpicbs05_flip-1_mt-on_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-mpicbs05/anat/{sub-mpicbs05_flip-1_mt-on_MTS_softseg.nii.gz => sub-mpicbs05_flip-1_mt-on_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mpicbs05/anat/{sub-mpicbs05_T2star_softseg.json => sub-mpicbs05_flip-2_mt-off_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-mpicbs05/anat/{sub-mpicbs05_flip-2_mt-off_MTS_softseg.nii.gz => sub-mpicbs05_flip-2_mt-off_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mpicbs05/anat/{sub-mpicbs05_T2w_softseg.json => sub-mpicbs05_space-other_T1w_softseg.json} (100%) rename derivatives/labels_softseg/sub-mpicbs05/anat/{sub-mpicbs05_T1w_softseg.nii.gz => sub-mpicbs05_space-other_T1w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mpicbs05/anat/{sub-mpicbs05_flip-1_mt-on_MTS_softseg.json => sub-mpicbs05_space-other_T2star_softseg.json} (100%) rename derivatives/labels_softseg/sub-mpicbs05/anat/{sub-mpicbs05_T2star_softseg.nii.gz => sub-mpicbs05_space-other_T2star_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mpicbs05/anat/{sub-mpicbs05_flip-2_mt-off_MTS_softseg.json => sub-mpicbs05_space-other_T2w_softseg.json} (100%) rename derivatives/labels_softseg/sub-mpicbs05/anat/{sub-mpicbs05_T2w_softseg.nii.gz => sub-mpicbs05_space-other_T2w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mpicbs06/anat/{sub-mpicbs06_T1w_softseg.json => sub-mpicbs06_flip-1_mt-on_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-mpicbs06/anat/{sub-mpicbs06_flip-1_mt-on_MTS_softseg.nii.gz => sub-mpicbs06_flip-1_mt-on_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mpicbs06/anat/{sub-mpicbs06_T2star_softseg.json => sub-mpicbs06_flip-2_mt-off_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-mpicbs06/anat/{sub-mpicbs06_flip-2_mt-off_MTS_softseg.nii.gz => sub-mpicbs06_flip-2_mt-off_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mpicbs06/anat/{sub-mpicbs06_T2w_softseg.json => sub-mpicbs06_space-other_T1w_softseg.json} (100%) rename derivatives/labels_softseg/sub-mpicbs06/anat/{sub-mpicbs06_T1w_softseg.nii.gz => sub-mpicbs06_space-other_T1w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mpicbs06/anat/{sub-mpicbs06_flip-1_mt-on_MTS_softseg.json => sub-mpicbs06_space-other_T2star_softseg.json} (100%) rename derivatives/labels_softseg/sub-mpicbs06/anat/{sub-mpicbs06_T2star_softseg.nii.gz => sub-mpicbs06_space-other_T2star_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mpicbs06/anat/{sub-mpicbs06_flip-2_mt-off_MTS_softseg.json => sub-mpicbs06_space-other_T2w_softseg.json} (100%) rename derivatives/labels_softseg/sub-mpicbs06/anat/{sub-mpicbs06_T2w_softseg.nii.gz => sub-mpicbs06_space-other_T2w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mpicbs07/anat/{sub-mpicbs07_T1w_softseg.json => sub-mpicbs07_flip-1_mt-on_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-mpicbs07/anat/{sub-mpicbs07_flip-1_mt-on_MTS_softseg.nii.gz => sub-mpicbs07_flip-1_mt-on_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mpicbs07/anat/{sub-mpicbs07_T2star_softseg.json => sub-mpicbs07_flip-2_mt-off_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-mpicbs07/anat/{sub-mpicbs07_flip-2_mt-off_MTS_softseg.nii.gz => sub-mpicbs07_flip-2_mt-off_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mpicbs07/anat/{sub-mpicbs07_T2w_softseg.json => sub-mpicbs07_space-other_T1w_softseg.json} (100%) rename derivatives/labels_softseg/sub-mpicbs07/anat/{sub-mpicbs07_T1w_softseg.nii.gz => sub-mpicbs07_space-other_T1w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mpicbs07/anat/{sub-mpicbs07_flip-1_mt-on_MTS_softseg.json => sub-mpicbs07_space-other_T2star_softseg.json} (100%) rename derivatives/labels_softseg/sub-mpicbs07/anat/{sub-mpicbs07_T2star_softseg.nii.gz => sub-mpicbs07_space-other_T2star_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mpicbs07/anat/{sub-mpicbs07_flip-2_mt-off_MTS_softseg.json => sub-mpicbs07_space-other_T2w_softseg.json} (100%) rename derivatives/labels_softseg/sub-mpicbs07/anat/{sub-mpicbs07_T2w_softseg.nii.gz => sub-mpicbs07_space-other_T2w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-nottwil01/anat/{sub-nottwil01_T1w_softseg.json => sub-nottwil01_flip-1_mt-on_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-nottwil01/anat/{sub-nottwil01_flip-1_mt-on_MTS_softseg.nii.gz => sub-nottwil01_flip-1_mt-on_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-nottwil01/anat/{sub-nottwil01_T2star_softseg.json => sub-nottwil01_flip-2_mt-off_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-nottwil01/anat/{sub-nottwil01_flip-2_mt-off_MTS_softseg.nii.gz => sub-nottwil01_flip-2_mt-off_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-nottwil01/anat/{sub-nottwil01_T2w_softseg.json => sub-nottwil01_space-other_T1w_softseg.json} (100%) rename derivatives/labels_softseg/sub-nottwil01/anat/{sub-nottwil01_T1w_softseg.nii.gz => sub-nottwil01_space-other_T1w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-nottwil01/anat/{sub-nottwil01_flip-1_mt-on_MTS_softseg.json => sub-nottwil01_space-other_T2star_softseg.json} (100%) rename derivatives/labels_softseg/sub-nottwil01/anat/{sub-nottwil01_T2star_softseg.nii.gz => sub-nottwil01_space-other_T2star_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-nottwil01/anat/{sub-nottwil01_flip-2_mt-off_MTS_softseg.json => sub-nottwil01_space-other_T2w_softseg.json} (100%) rename derivatives/labels_softseg/sub-nottwil01/anat/{sub-nottwil01_T2w_softseg.nii.gz => sub-nottwil01_space-other_T2w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-nottwil02/anat/{sub-nottwil02_T1w_softseg.json => sub-nottwil02_flip-1_mt-on_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-nottwil02/anat/{sub-nottwil02_flip-1_mt-on_MTS_softseg.nii.gz => sub-nottwil02_flip-1_mt-on_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-nottwil02/anat/{sub-nottwil02_flip-1_mt-on_MTS_softseg.json => sub-nottwil02_flip-2_mt-off_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-nottwil02/anat/{sub-nottwil02_flip-2_mt-off_MTS_softseg.nii.gz => sub-nottwil02_flip-2_mt-off_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-nottwil02/anat/{sub-nottwil02_flip-2_mt-off_MTS_softseg.json => sub-nottwil02_space-other_T1w_softseg.json} (100%) rename derivatives/labels_softseg/sub-nottwil02/anat/{sub-nottwil02_T1w_softseg.nii.gz => sub-nottwil02_space-other_T1w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-nottwil02/anat/{sub-nottwil02_T2star_softseg.json => sub-nottwil02_space-other_T2star_softseg.json} (100%) rename derivatives/labels_softseg/sub-nottwil02/anat/{sub-nottwil02_T2star_softseg.nii.gz => sub-nottwil02_space-other_T2star_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-nottwil02/anat/{sub-nottwil02_T2w_softseg.json => sub-nottwil02_space-other_T2w_softseg.json} (100%) rename derivatives/labels_softseg/sub-nottwil02/anat/{sub-nottwil02_T2w_softseg.nii.gz => sub-nottwil02_space-other_T2w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-nottwil03/anat/{sub-nottwil03_T1w_softseg.json => sub-nottwil03_flip-1_mt-on_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-nottwil03/anat/{sub-nottwil03_flip-1_mt-on_MTS_softseg.nii.gz => sub-nottwil03_flip-1_mt-on_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-nottwil03/anat/{sub-nottwil03_T2star_softseg.json => sub-nottwil03_flip-2_mt-off_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-nottwil03/anat/{sub-nottwil03_flip-2_mt-off_MTS_softseg.nii.gz => sub-nottwil03_flip-2_mt-off_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-nottwil03/anat/{sub-nottwil03_T2w_softseg.json => sub-nottwil03_space-other_T1w_softseg.json} (100%) rename derivatives/labels_softseg/sub-nottwil03/anat/{sub-nottwil03_T1w_softseg.nii.gz => sub-nottwil03_space-other_T1w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-nottwil03/anat/{sub-nottwil03_flip-1_mt-on_MTS_softseg.json => sub-nottwil03_space-other_T2star_softseg.json} (100%) rename derivatives/labels_softseg/sub-nottwil03/anat/{sub-nottwil03_T2star_softseg.nii.gz => sub-nottwil03_space-other_T2star_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-nottwil03/anat/{sub-nottwil03_flip-2_mt-off_MTS_softseg.json => sub-nottwil03_space-other_T2w_softseg.json} (100%) rename derivatives/labels_softseg/sub-nottwil03/anat/{sub-nottwil03_T2w_softseg.nii.gz => sub-nottwil03_space-other_T2w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-nottwil04/anat/{sub-nottwil04_T1w_softseg.json => sub-nottwil04_flip-1_mt-on_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-nottwil04/anat/{sub-nottwil04_flip-1_mt-on_MTS_softseg.nii.gz => sub-nottwil04_flip-1_mt-on_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-nottwil04/anat/{sub-nottwil04_T2star_softseg.json => sub-nottwil04_flip-2_mt-off_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-nottwil04/anat/{sub-nottwil04_flip-2_mt-off_MTS_softseg.nii.gz => sub-nottwil04_flip-2_mt-off_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-nottwil04/anat/{sub-nottwil04_T2w_softseg.json => sub-nottwil04_space-other_T1w_softseg.json} (100%) rename derivatives/labels_softseg/sub-nottwil04/anat/{sub-nottwil04_T1w_softseg.nii.gz => sub-nottwil04_space-other_T1w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-nottwil04/anat/{sub-nottwil04_flip-1_mt-on_MTS_softseg.json => sub-nottwil04_space-other_T2star_softseg.json} (100%) rename derivatives/labels_softseg/sub-nottwil04/anat/{sub-nottwil04_T2star_softseg.nii.gz => sub-nottwil04_space-other_T2star_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-nottwil04/anat/{sub-nottwil04_flip-2_mt-off_MTS_softseg.json => sub-nottwil04_space-other_T2w_softseg.json} (100%) rename derivatives/labels_softseg/sub-nottwil04/anat/{sub-nottwil04_T2w_softseg.nii.gz => sub-nottwil04_space-other_T2w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-nottwil05/anat/{sub-nottwil05_T1w_softseg.json => sub-nottwil05_flip-1_mt-on_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-nottwil05/anat/{sub-nottwil05_flip-1_mt-on_MTS_softseg.nii.gz => sub-nottwil05_flip-1_mt-on_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-nottwil05/anat/{sub-nottwil05_T2star_softseg.json => sub-nottwil05_flip-2_mt-off_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-nottwil05/anat/{sub-nottwil05_flip-2_mt-off_MTS_softseg.nii.gz => sub-nottwil05_flip-2_mt-off_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-nottwil05/anat/{sub-nottwil05_T2w_softseg.json => sub-nottwil05_space-other_T1w_softseg.json} (100%) rename derivatives/labels_softseg/sub-nottwil05/anat/{sub-nottwil05_T1w_softseg.nii.gz => sub-nottwil05_space-other_T1w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-nottwil05/anat/{sub-nottwil05_flip-1_mt-on_MTS_softseg.json => sub-nottwil05_space-other_T2star_softseg.json} (100%) rename derivatives/labels_softseg/sub-nottwil05/anat/{sub-nottwil05_T2star_softseg.nii.gz => sub-nottwil05_space-other_T2star_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-nottwil05/anat/{sub-nottwil05_flip-2_mt-off_MTS_softseg.json => sub-nottwil05_space-other_T2w_softseg.json} (100%) rename derivatives/labels_softseg/sub-nottwil05/anat/{sub-nottwil05_T2w_softseg.nii.gz => sub-nottwil05_space-other_T2w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-nottwil06/anat/{sub-nottwil06_flip-1_mt-on_MTS_softseg.json => sub-nottwil06_flip-1_mt-on_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-nottwil06/anat/{sub-nottwil06_flip-1_mt-on_MTS_softseg.nii.gz => sub-nottwil06_flip-1_mt-on_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-nottwil06/anat/{sub-nottwil06_flip-2_mt-off_MTS_softseg.json => sub-nottwil06_flip-2_mt-off_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-nottwil06/anat/{sub-nottwil06_flip-2_mt-off_MTS_softseg.nii.gz => sub-nottwil06_flip-2_mt-off_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-nottwil06/anat/{sub-nottwil06_T1w_softseg.json => sub-nottwil06_space-other_T1w_softseg.json} (100%) rename derivatives/labels_softseg/sub-nottwil06/anat/{sub-nottwil06_T1w_softseg.nii.gz => sub-nottwil06_space-other_T1w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-nottwil06/anat/{sub-nottwil06_T2star_softseg.json => sub-nottwil06_space-other_T2star_softseg.json} (100%) rename derivatives/labels_softseg/sub-nottwil06/anat/{sub-nottwil06_T2star_softseg.nii.gz => sub-nottwil06_space-other_T2star_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-nottwil06/anat/{sub-nottwil06_T2w_softseg.json => sub-nottwil06_space-other_T2w_softseg.json} (100%) rename derivatives/labels_softseg/sub-nottwil06/anat/{sub-nottwil06_T2w_softseg.nii.gz => sub-nottwil06_space-other_T2w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-nwu01/anat/{sub-nwu01_T1w_softseg.json => sub-nwu01_flip-1_mt-on_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-nwu01/anat/{sub-nwu01_flip-1_mt-on_MTS_softseg.nii.gz => sub-nwu01_flip-1_mt-on_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-nwu01/anat/{sub-nwu01_T2star_softseg.json => sub-nwu01_flip-2_mt-off_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-nwu01/anat/{sub-nwu01_flip-2_mt-off_MTS_softseg.nii.gz => sub-nwu01_flip-2_mt-off_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-nwu01/anat/{sub-nwu01_T2w_softseg.json => sub-nwu01_space-other_T1w_softseg.json} (100%) rename derivatives/labels_softseg/sub-nwu01/anat/{sub-nwu01_T1w_softseg.nii.gz => sub-nwu01_space-other_T1w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-nwu01/anat/{sub-nwu01_flip-1_mt-on_MTS_softseg.json => sub-nwu01_space-other_T2star_softseg.json} (100%) rename derivatives/labels_softseg/sub-nwu01/anat/{sub-nwu01_T2star_softseg.nii.gz => sub-nwu01_space-other_T2star_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-nwu01/anat/{sub-nwu01_flip-2_mt-off_MTS_softseg.json => sub-nwu01_space-other_T2w_softseg.json} (100%) rename derivatives/labels_softseg/sub-nwu01/anat/{sub-nwu01_T2w_softseg.nii.gz => sub-nwu01_space-other_T2w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-nwu02/anat/{sub-nwu02_T1w_softseg.json => sub-nwu02_flip-1_mt-on_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-nwu02/anat/{sub-nwu02_flip-1_mt-on_MTS_softseg.nii.gz => sub-nwu02_flip-1_mt-on_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-nwu02/anat/{sub-nwu02_T2star_softseg.json => sub-nwu02_flip-2_mt-off_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-nwu02/anat/{sub-nwu02_flip-2_mt-off_MTS_softseg.nii.gz => sub-nwu02_flip-2_mt-off_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-nwu02/anat/{sub-nwu02_T2w_softseg.json => sub-nwu02_space-other_T1w_softseg.json} (100%) rename derivatives/labels_softseg/sub-nwu02/anat/{sub-nwu02_T1w_softseg.nii.gz => sub-nwu02_space-other_T1w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-nwu02/anat/{sub-nwu02_flip-1_mt-on_MTS_softseg.json => sub-nwu02_space-other_T2star_softseg.json} (100%) rename derivatives/labels_softseg/sub-nwu02/anat/{sub-nwu02_T2star_softseg.nii.gz => sub-nwu02_space-other_T2star_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-nwu02/anat/{sub-nwu02_flip-2_mt-off_MTS_softseg.json => sub-nwu02_space-other_T2w_softseg.json} (100%) rename derivatives/labels_softseg/sub-nwu02/anat/{sub-nwu02_T2w_softseg.nii.gz => sub-nwu02_space-other_T2w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-nwu03/anat/{sub-nwu03_T1w_softseg.json => sub-nwu03_flip-1_mt-on_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-nwu03/anat/{sub-nwu03_flip-1_mt-on_MTS_softseg.nii.gz => sub-nwu03_flip-1_mt-on_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-nwu03/anat/{sub-nwu03_T2star_softseg.json => sub-nwu03_flip-2_mt-off_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-nwu03/anat/{sub-nwu03_flip-2_mt-off_MTS_softseg.nii.gz => sub-nwu03_flip-2_mt-off_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-nwu03/anat/{sub-nwu03_T2w_softseg.json => sub-nwu03_space-other_T1w_softseg.json} (100%) rename derivatives/labels_softseg/sub-nwu03/anat/{sub-nwu03_T1w_softseg.nii.gz => sub-nwu03_space-other_T1w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-nwu03/anat/{sub-nwu03_flip-1_mt-on_MTS_softseg.json => sub-nwu03_space-other_T2star_softseg.json} (100%) rename derivatives/labels_softseg/sub-nwu03/anat/{sub-nwu03_T2star_softseg.nii.gz => sub-nwu03_space-other_T2star_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-nwu03/anat/{sub-nwu03_flip-2_mt-off_MTS_softseg.json => sub-nwu03_space-other_T2w_softseg.json} (100%) rename derivatives/labels_softseg/sub-nwu03/anat/{sub-nwu03_T2w_softseg.nii.gz => sub-nwu03_space-other_T2w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-nwu04/anat/{sub-nwu04_T1w_softseg.json => sub-nwu04_flip-1_mt-on_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-nwu04/anat/{sub-nwu04_flip-1_mt-on_MTS_softseg.nii.gz => sub-nwu04_flip-1_mt-on_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-nwu04/anat/{sub-nwu04_T2star_softseg.json => sub-nwu04_flip-2_mt-off_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-nwu04/anat/{sub-nwu04_flip-2_mt-off_MTS_softseg.nii.gz => sub-nwu04_flip-2_mt-off_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-nwu04/anat/{sub-nwu04_T2w_softseg.json => sub-nwu04_space-other_T1w_softseg.json} (100%) rename derivatives/labels_softseg/sub-nwu04/anat/{sub-nwu04_T1w_softseg.nii.gz => sub-nwu04_space-other_T1w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-nwu04/anat/{sub-nwu04_flip-1_mt-on_MTS_softseg.json => sub-nwu04_space-other_T2star_softseg.json} (100%) rename derivatives/labels_softseg/sub-nwu04/anat/{sub-nwu04_T2star_softseg.nii.gz => sub-nwu04_space-other_T2star_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-nwu04/anat/{sub-nwu04_flip-2_mt-off_MTS_softseg.json => sub-nwu04_space-other_T2w_softseg.json} (100%) rename derivatives/labels_softseg/sub-nwu04/anat/{sub-nwu04_T2w_softseg.nii.gz => sub-nwu04_space-other_T2w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-nwu05/anat/{sub-nwu05_T1w_softseg.json => sub-nwu05_flip-1_mt-on_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-nwu05/anat/{sub-nwu05_flip-1_mt-on_MTS_softseg.nii.gz => sub-nwu05_flip-1_mt-on_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-nwu05/anat/{sub-nwu05_T2star_softseg.json => sub-nwu05_flip-2_mt-off_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-nwu05/anat/{sub-nwu05_flip-2_mt-off_MTS_softseg.nii.gz => sub-nwu05_flip-2_mt-off_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-nwu05/anat/{sub-nwu05_T2w_softseg.json => sub-nwu05_space-other_T1w_softseg.json} (100%) rename derivatives/labels_softseg/sub-nwu05/anat/{sub-nwu05_T1w_softseg.nii.gz => sub-nwu05_space-other_T1w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-nwu05/anat/{sub-nwu05_flip-1_mt-on_MTS_softseg.json => sub-nwu05_space-other_T2star_softseg.json} (100%) rename derivatives/labels_softseg/sub-nwu05/anat/{sub-nwu05_T2star_softseg.nii.gz => sub-nwu05_space-other_T2star_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-nwu05/anat/{sub-nwu05_flip-2_mt-off_MTS_softseg.json => sub-nwu05_space-other_T2w_softseg.json} (100%) rename derivatives/labels_softseg/sub-nwu05/anat/{sub-nwu05_T2w_softseg.nii.gz => sub-nwu05_space-other_T2w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-nwu06/anat/{sub-nwu06_T1w_softseg.json => sub-nwu06_flip-1_mt-on_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-nwu06/anat/{sub-nwu06_flip-1_mt-on_MTS_softseg.nii.gz => sub-nwu06_flip-1_mt-on_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-nwu06/anat/{sub-nwu06_T2star_softseg.json => sub-nwu06_flip-2_mt-off_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-nwu06/anat/{sub-nwu06_flip-2_mt-off_MTS_softseg.nii.gz => sub-nwu06_flip-2_mt-off_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-nwu06/anat/{sub-nwu06_T2w_softseg.json => sub-nwu06_space-other_T1w_softseg.json} (100%) rename derivatives/labels_softseg/sub-nwu06/anat/{sub-nwu06_T1w_softseg.nii.gz => sub-nwu06_space-other_T1w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-nwu06/anat/{sub-nwu06_flip-1_mt-on_MTS_softseg.json => sub-nwu06_space-other_T2star_softseg.json} (100%) rename derivatives/labels_softseg/sub-nwu06/anat/{sub-nwu06_T2star_softseg.nii.gz => sub-nwu06_space-other_T2star_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-nwu06/anat/{sub-nwu06_flip-2_mt-off_MTS_softseg.json => sub-nwu06_space-other_T2w_softseg.json} (100%) rename derivatives/labels_softseg/sub-nwu06/anat/{sub-nwu06_T2w_softseg.nii.gz => sub-nwu06_space-other_T2w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-oxfordFmrib02/anat/{sub-oxfordFmrib02_T1w_softseg.json => sub-oxfordFmrib02_flip-1_mt-on_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-oxfordFmrib02/anat/{sub-oxfordFmrib02_flip-1_mt-on_MTS_softseg.nii.gz => sub-oxfordFmrib02_flip-1_mt-on_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-oxfordFmrib02/anat/{sub-oxfordFmrib02_T2star_softseg.json => sub-oxfordFmrib02_flip-2_mt-off_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-oxfordFmrib02/anat/{sub-oxfordFmrib02_flip-2_mt-off_MTS_softseg.nii.gz => sub-oxfordFmrib02_flip-2_mt-off_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-oxfordFmrib02/anat/{sub-oxfordFmrib02_T2w_softseg.json => sub-oxfordFmrib02_space-other_T1w_softseg.json} (100%) rename derivatives/labels_softseg/sub-oxfordFmrib02/anat/{sub-oxfordFmrib02_T1w_softseg.nii.gz => sub-oxfordFmrib02_space-other_T1w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-oxfordFmrib02/anat/{sub-oxfordFmrib02_flip-1_mt-on_MTS_softseg.json => sub-oxfordFmrib02_space-other_T2star_softseg.json} (100%) rename derivatives/labels_softseg/sub-oxfordFmrib02/anat/{sub-oxfordFmrib02_T2star_softseg.nii.gz => sub-oxfordFmrib02_space-other_T2star_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-oxfordFmrib02/anat/{sub-oxfordFmrib02_flip-2_mt-off_MTS_softseg.json => sub-oxfordFmrib02_space-other_T2w_softseg.json} (100%) rename derivatives/labels_softseg/sub-oxfordFmrib02/anat/{sub-oxfordFmrib02_T2w_softseg.nii.gz => sub-oxfordFmrib02_space-other_T2w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-oxfordFmrib03/anat/{sub-oxfordFmrib03_flip-1_mt-on_MTS_softseg.json => sub-oxfordFmrib03_flip-1_mt-on_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-oxfordFmrib03/anat/{sub-oxfordFmrib03_flip-1_mt-on_MTS_softseg.nii.gz => sub-oxfordFmrib03_flip-1_mt-on_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-oxfordFmrib03/anat/{sub-oxfordFmrib03_flip-2_mt-off_MTS_softseg.json => sub-oxfordFmrib03_flip-2_mt-off_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-oxfordFmrib03/anat/{sub-oxfordFmrib03_flip-2_mt-off_MTS_softseg.nii.gz => sub-oxfordFmrib03_flip-2_mt-off_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-oxfordFmrib03/anat/{sub-oxfordFmrib03_T1w_softseg.json => sub-oxfordFmrib03_space-other_T1w_softseg.json} (100%) rename derivatives/labels_softseg/sub-oxfordFmrib03/anat/{sub-oxfordFmrib03_T1w_softseg.nii.gz => sub-oxfordFmrib03_space-other_T1w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-oxfordFmrib03/anat/{sub-oxfordFmrib03_T2star_softseg.json => sub-oxfordFmrib03_space-other_T2star_softseg.json} (100%) rename derivatives/labels_softseg/sub-oxfordFmrib03/anat/{sub-oxfordFmrib03_T2star_softseg.nii.gz => sub-oxfordFmrib03_space-other_T2star_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-oxfordFmrib03/anat/{sub-oxfordFmrib03_T2w_softseg.json => sub-oxfordFmrib03_space-other_T2w_softseg.json} (100%) rename derivatives/labels_softseg/sub-oxfordFmrib03/anat/{sub-oxfordFmrib03_T2w_softseg.nii.gz => sub-oxfordFmrib03_space-other_T2w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-oxfordFmrib04/anat/{sub-oxfordFmrib04_T1w_softseg.json => sub-oxfordFmrib04_flip-1_mt-on_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-oxfordFmrib04/anat/{sub-oxfordFmrib04_flip-1_mt-on_MTS_softseg.nii.gz => sub-oxfordFmrib04_flip-1_mt-on_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-oxfordFmrib04/anat/{sub-oxfordFmrib04_T2star_softseg.json => sub-oxfordFmrib04_flip-2_mt-off_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-oxfordFmrib04/anat/{sub-oxfordFmrib04_flip-2_mt-off_MTS_softseg.nii.gz => sub-oxfordFmrib04_flip-2_mt-off_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-oxfordFmrib04/anat/{sub-oxfordFmrib04_T2w_softseg.json => sub-oxfordFmrib04_space-other_T1w_softseg.json} (100%) rename derivatives/labels_softseg/sub-oxfordFmrib04/anat/{sub-oxfordFmrib04_T1w_softseg.nii.gz => sub-oxfordFmrib04_space-other_T1w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-oxfordFmrib04/anat/{sub-oxfordFmrib04_flip-1_mt-on_MTS_softseg.json => sub-oxfordFmrib04_space-other_T2star_softseg.json} (100%) rename derivatives/labels_softseg/sub-oxfordFmrib04/anat/{sub-oxfordFmrib04_T2star_softseg.nii.gz => sub-oxfordFmrib04_space-other_T2star_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-oxfordFmrib04/anat/{sub-oxfordFmrib04_flip-2_mt-off_MTS_softseg.json => sub-oxfordFmrib04_space-other_T2w_softseg.json} (100%) rename derivatives/labels_softseg/sub-oxfordFmrib04/anat/{sub-oxfordFmrib04_T2w_softseg.nii.gz => sub-oxfordFmrib04_space-other_T2w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-oxfordFmrib05/anat/{sub-oxfordFmrib05_T1w_softseg.json => sub-oxfordFmrib05_flip-1_mt-on_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-oxfordFmrib05/anat/{sub-oxfordFmrib05_flip-1_mt-on_MTS_softseg.nii.gz => sub-oxfordFmrib05_flip-1_mt-on_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-oxfordFmrib05/anat/{sub-oxfordFmrib05_T2star_softseg.json => sub-oxfordFmrib05_flip-2_mt-off_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-oxfordFmrib05/anat/{sub-oxfordFmrib05_flip-2_mt-off_MTS_softseg.nii.gz => sub-oxfordFmrib05_flip-2_mt-off_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-oxfordFmrib05/anat/{sub-oxfordFmrib05_T2w_softseg.json => sub-oxfordFmrib05_space-other_T1w_softseg.json} (100%) rename derivatives/labels_softseg/sub-oxfordFmrib05/anat/{sub-oxfordFmrib05_T1w_softseg.nii.gz => sub-oxfordFmrib05_space-other_T1w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-oxfordFmrib05/anat/{sub-oxfordFmrib05_flip-1_mt-on_MTS_softseg.json => sub-oxfordFmrib05_space-other_T2star_softseg.json} (100%) rename derivatives/labels_softseg/sub-oxfordFmrib05/anat/{sub-oxfordFmrib05_T2star_softseg.nii.gz => sub-oxfordFmrib05_space-other_T2star_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-oxfordFmrib05/anat/{sub-oxfordFmrib05_flip-2_mt-off_MTS_softseg.json => sub-oxfordFmrib05_space-other_T2w_softseg.json} (100%) rename derivatives/labels_softseg/sub-oxfordFmrib05/anat/{sub-oxfordFmrib05_T2w_softseg.nii.gz => sub-oxfordFmrib05_space-other_T2w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-oxfordFmrib06/anat/{sub-oxfordFmrib06_T1w_softseg.json => sub-oxfordFmrib06_flip-1_mt-on_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-oxfordFmrib06/anat/{sub-oxfordFmrib06_flip-1_mt-on_MTS_softseg.nii.gz => sub-oxfordFmrib06_flip-1_mt-on_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-oxfordFmrib06/anat/{sub-oxfordFmrib06_T2star_softseg.json => sub-oxfordFmrib06_flip-2_mt-off_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-oxfordFmrib06/anat/{sub-oxfordFmrib06_flip-2_mt-off_MTS_softseg.nii.gz => sub-oxfordFmrib06_flip-2_mt-off_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-oxfordFmrib06/anat/{sub-oxfordFmrib06_T2w_softseg.json => sub-oxfordFmrib06_space-other_T1w_softseg.json} (100%) rename derivatives/labels_softseg/sub-oxfordFmrib06/anat/{sub-oxfordFmrib06_T1w_softseg.nii.gz => sub-oxfordFmrib06_space-other_T1w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-oxfordFmrib06/anat/{sub-oxfordFmrib06_flip-1_mt-on_MTS_softseg.json => sub-oxfordFmrib06_space-other_T2star_softseg.json} (100%) rename derivatives/labels_softseg/sub-oxfordFmrib06/anat/{sub-oxfordFmrib06_T2star_softseg.nii.gz => sub-oxfordFmrib06_space-other_T2star_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-oxfordFmrib06/anat/{sub-oxfordFmrib06_flip-2_mt-off_MTS_softseg.json => sub-oxfordFmrib06_space-other_T2w_softseg.json} (100%) rename derivatives/labels_softseg/sub-oxfordFmrib06/anat/{sub-oxfordFmrib06_T2w_softseg.nii.gz => sub-oxfordFmrib06_space-other_T2w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-oxfordFmrib07/anat/{sub-oxfordFmrib07_T1w_softseg.json => sub-oxfordFmrib07_flip-1_mt-on_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-oxfordFmrib07/anat/{sub-oxfordFmrib07_flip-1_mt-on_MTS_softseg.nii.gz => sub-oxfordFmrib07_flip-1_mt-on_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-oxfordFmrib07/anat/{sub-oxfordFmrib07_T2star_softseg.json => sub-oxfordFmrib07_flip-2_mt-off_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-oxfordFmrib07/anat/{sub-oxfordFmrib07_flip-2_mt-off_MTS_softseg.nii.gz => sub-oxfordFmrib07_flip-2_mt-off_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-oxfordFmrib07/anat/{sub-oxfordFmrib07_T2w_softseg.json => sub-oxfordFmrib07_space-other_T1w_softseg.json} (100%) rename derivatives/labels_softseg/sub-oxfordFmrib07/anat/{sub-oxfordFmrib07_T1w_softseg.nii.gz => sub-oxfordFmrib07_space-other_T1w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-oxfordFmrib07/anat/{sub-oxfordFmrib07_flip-1_mt-on_MTS_softseg.json => sub-oxfordFmrib07_space-other_T2star_softseg.json} (100%) rename derivatives/labels_softseg/sub-oxfordFmrib07/anat/{sub-oxfordFmrib07_T2star_softseg.nii.gz => sub-oxfordFmrib07_space-other_T2star_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-oxfordFmrib07/anat/{sub-oxfordFmrib07_flip-2_mt-off_MTS_softseg.json => sub-oxfordFmrib07_space-other_T2w_softseg.json} (100%) rename derivatives/labels_softseg/sub-oxfordFmrib07/anat/{sub-oxfordFmrib07_T2w_softseg.nii.gz => sub-oxfordFmrib07_space-other_T2w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-oxfordFmrib08/anat/{sub-oxfordFmrib08_flip-1_mt-on_MTS_softseg.json => sub-oxfordFmrib08_flip-1_mt-on_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-oxfordFmrib08/anat/{sub-oxfordFmrib08_flip-1_mt-on_MTS_softseg.nii.gz => sub-oxfordFmrib08_flip-1_mt-on_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-oxfordFmrib08/anat/{sub-oxfordFmrib08_T1w_softseg.json => sub-oxfordFmrib08_flip-2_mt-off_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-oxfordFmrib08/anat/{sub-oxfordFmrib08_flip-2_mt-off_MTS_softseg.nii.gz => sub-oxfordFmrib08_flip-2_mt-off_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-oxfordFmrib08/anat/{sub-oxfordFmrib08_T2star_softseg.json => sub-oxfordFmrib08_space-other_T1w_softseg.json} (100%) rename derivatives/labels_softseg/sub-oxfordFmrib08/anat/{sub-oxfordFmrib08_T1w_softseg.nii.gz => sub-oxfordFmrib08_space-other_T1w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-oxfordFmrib08/anat/{sub-oxfordFmrib08_T2w_softseg.json => sub-oxfordFmrib08_space-other_T2star_softseg.json} (100%) rename derivatives/labels_softseg/sub-oxfordFmrib08/anat/{sub-oxfordFmrib08_T2star_softseg.nii.gz => sub-oxfordFmrib08_space-other_T2star_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-oxfordFmrib08/anat/{sub-oxfordFmrib08_flip-2_mt-off_MTS_softseg.json => sub-oxfordFmrib08_space-other_T2w_softseg.json} (100%) rename derivatives/labels_softseg/sub-oxfordFmrib08/anat/{sub-oxfordFmrib08_T2w_softseg.nii.gz => sub-oxfordFmrib08_space-other_T2w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-oxfordFmrib09/anat/{sub-oxfordFmrib09_T1w_softseg.json => sub-oxfordFmrib09_flip-1_mt-on_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-oxfordFmrib09/anat/{sub-oxfordFmrib09_flip-1_mt-on_MTS_softseg.nii.gz => sub-oxfordFmrib09_flip-1_mt-on_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-oxfordFmrib09/anat/{sub-oxfordFmrib09_T2star_softseg.json => sub-oxfordFmrib09_flip-2_mt-off_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-oxfordFmrib09/anat/{sub-oxfordFmrib09_flip-2_mt-off_MTS_softseg.nii.gz => sub-oxfordFmrib09_flip-2_mt-off_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-oxfordFmrib09/anat/{sub-oxfordFmrib09_T2w_softseg.json => sub-oxfordFmrib09_space-other_T1w_softseg.json} (100%) rename derivatives/labels_softseg/sub-oxfordFmrib09/anat/{sub-oxfordFmrib09_T1w_softseg.nii.gz => sub-oxfordFmrib09_space-other_T1w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-oxfordFmrib09/anat/{sub-oxfordFmrib09_flip-1_mt-on_MTS_softseg.json => sub-oxfordFmrib09_space-other_T2star_softseg.json} (100%) rename derivatives/labels_softseg/sub-oxfordFmrib09/anat/{sub-oxfordFmrib09_T2star_softseg.nii.gz => sub-oxfordFmrib09_space-other_T2star_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-oxfordFmrib09/anat/{sub-oxfordFmrib09_flip-2_mt-off_MTS_softseg.json => sub-oxfordFmrib09_space-other_T2w_softseg.json} (100%) rename derivatives/labels_softseg/sub-oxfordFmrib09/anat/{sub-oxfordFmrib09_T2w_softseg.nii.gz => sub-oxfordFmrib09_space-other_T2w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-oxfordFmrib10/anat/{sub-oxfordFmrib10_T1w_softseg.json => sub-oxfordFmrib10_flip-1_mt-on_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-oxfordFmrib10/anat/{sub-oxfordFmrib10_flip-1_mt-on_MTS_softseg.nii.gz => sub-oxfordFmrib10_flip-1_mt-on_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-oxfordFmrib10/anat/{sub-oxfordFmrib10_T2star_softseg.json => sub-oxfordFmrib10_flip-2_mt-off_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-oxfordFmrib10/anat/{sub-oxfordFmrib10_flip-2_mt-off_MTS_softseg.nii.gz => sub-oxfordFmrib10_flip-2_mt-off_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-oxfordFmrib10/anat/{sub-oxfordFmrib10_T2w_softseg.json => sub-oxfordFmrib10_space-other_T1w_softseg.json} (100%) rename derivatives/labels_softseg/sub-oxfordFmrib10/anat/{sub-oxfordFmrib10_T1w_softseg.nii.gz => sub-oxfordFmrib10_space-other_T1w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-oxfordFmrib10/anat/{sub-oxfordFmrib10_flip-1_mt-on_MTS_softseg.json => sub-oxfordFmrib10_space-other_T2star_softseg.json} (100%) rename derivatives/labels_softseg/sub-oxfordFmrib10/anat/{sub-oxfordFmrib10_T2star_softseg.nii.gz => sub-oxfordFmrib10_space-other_T2star_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-oxfordFmrib10/anat/{sub-oxfordFmrib10_flip-2_mt-off_MTS_softseg.json => sub-oxfordFmrib10_space-other_T2w_softseg.json} (100%) rename derivatives/labels_softseg/sub-oxfordFmrib10/anat/{sub-oxfordFmrib10_T2w_softseg.nii.gz => sub-oxfordFmrib10_space-other_T2w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-oxfordFmrib11/anat/{sub-oxfordFmrib11_T1w_softseg.json => sub-oxfordFmrib11_flip-1_mt-on_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-oxfordFmrib11/anat/{sub-oxfordFmrib11_flip-1_mt-on_MTS_softseg.nii.gz => sub-oxfordFmrib11_flip-1_mt-on_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-oxfordFmrib11/anat/{sub-oxfordFmrib11_T2star_softseg.json => sub-oxfordFmrib11_flip-2_mt-off_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-oxfordFmrib11/anat/{sub-oxfordFmrib11_flip-2_mt-off_MTS_softseg.nii.gz => sub-oxfordFmrib11_flip-2_mt-off_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-oxfordFmrib11/anat/{sub-oxfordFmrib11_T2w_softseg.json => sub-oxfordFmrib11_space-other_T1w_softseg.json} (100%) rename derivatives/labels_softseg/sub-oxfordFmrib11/anat/{sub-oxfordFmrib11_T1w_softseg.nii.gz => sub-oxfordFmrib11_space-other_T1w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-oxfordFmrib11/anat/{sub-oxfordFmrib11_flip-1_mt-on_MTS_softseg.json => sub-oxfordFmrib11_space-other_T2star_softseg.json} (100%) rename derivatives/labels_softseg/sub-oxfordFmrib11/anat/{sub-oxfordFmrib11_T2star_softseg.nii.gz => sub-oxfordFmrib11_space-other_T2star_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-oxfordFmrib11/anat/{sub-oxfordFmrib11_flip-2_mt-off_MTS_softseg.json => sub-oxfordFmrib11_space-other_T2w_softseg.json} (100%) rename derivatives/labels_softseg/sub-oxfordFmrib11/anat/{sub-oxfordFmrib11_T2w_softseg.nii.gz => sub-oxfordFmrib11_space-other_T2w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-oxfordOhba01/anat/{sub-oxfordOhba01_flip-1_mt-on_MTS_softseg.json => sub-oxfordOhba01_flip-1_mt-on_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-oxfordOhba01/anat/{sub-oxfordOhba01_flip-1_mt-on_MTS_softseg.nii.gz => sub-oxfordOhba01_flip-1_mt-on_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-oxfordOhba01/anat/{sub-oxfordOhba01_flip-2_mt-off_MTS_softseg.json => sub-oxfordOhba01_flip-2_mt-off_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-oxfordOhba01/anat/{sub-oxfordOhba01_flip-2_mt-off_MTS_softseg.nii.gz => sub-oxfordOhba01_flip-2_mt-off_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-oxfordOhba01/anat/{sub-oxfordOhba01_T1w_softseg.json => sub-oxfordOhba01_space-other_T1w_softseg.json} (100%) rename derivatives/labels_softseg/sub-oxfordOhba01/anat/{sub-oxfordOhba01_T1w_softseg.nii.gz => sub-oxfordOhba01_space-other_T1w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-oxfordOhba01/anat/{sub-oxfordOhba01_T2star_softseg.json => sub-oxfordOhba01_space-other_T2star_softseg.json} (100%) rename derivatives/labels_softseg/sub-oxfordOhba01/anat/{sub-oxfordOhba01_T2star_softseg.nii.gz => sub-oxfordOhba01_space-other_T2star_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-oxfordOhba01/anat/{sub-oxfordOhba01_T2w_softseg.json => sub-oxfordOhba01_space-other_T2w_softseg.json} (100%) rename derivatives/labels_softseg/sub-oxfordOhba01/anat/{sub-oxfordOhba01_T2w_softseg.nii.gz => sub-oxfordOhba01_space-other_T2w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-oxfordOhba02/anat/{sub-oxfordOhba02_T1w_softseg.json => sub-oxfordOhba02_flip-1_mt-on_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-oxfordOhba02/anat/{sub-oxfordOhba02_flip-1_mt-on_MTS_softseg.nii.gz => sub-oxfordOhba02_flip-1_mt-on_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-oxfordOhba02/anat/{sub-oxfordOhba02_T2star_softseg.json => sub-oxfordOhba02_flip-2_mt-off_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-oxfordOhba02/anat/{sub-oxfordOhba02_flip-2_mt-off_MTS_softseg.nii.gz => sub-oxfordOhba02_flip-2_mt-off_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-oxfordOhba02/anat/{sub-oxfordOhba02_T2w_softseg.json => sub-oxfordOhba02_space-other_T1w_softseg.json} (100%) rename derivatives/labels_softseg/sub-oxfordOhba02/anat/{sub-oxfordOhba02_T1w_softseg.nii.gz => sub-oxfordOhba02_space-other_T1w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-oxfordOhba02/anat/{sub-oxfordOhba02_flip-1_mt-on_MTS_softseg.json => sub-oxfordOhba02_space-other_T2star_softseg.json} (100%) rename derivatives/labels_softseg/sub-oxfordOhba02/anat/{sub-oxfordOhba02_T2star_softseg.nii.gz => sub-oxfordOhba02_space-other_T2star_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-oxfordOhba02/anat/{sub-oxfordOhba02_flip-2_mt-off_MTS_softseg.json => sub-oxfordOhba02_space-other_T2w_softseg.json} (100%) rename derivatives/labels_softseg/sub-oxfordOhba02/anat/{sub-oxfordOhba02_T2w_softseg.nii.gz => sub-oxfordOhba02_space-other_T2w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-oxfordOhba03/anat/{sub-oxfordOhba03_T1w_softseg.json => sub-oxfordOhba03_flip-1_mt-on_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-oxfordOhba03/anat/{sub-oxfordOhba03_flip-1_mt-on_MTS_softseg.nii.gz => sub-oxfordOhba03_flip-1_mt-on_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-oxfordOhba03/anat/{sub-oxfordOhba03_T2star_softseg.json => sub-oxfordOhba03_flip-2_mt-off_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-oxfordOhba03/anat/{sub-oxfordOhba03_flip-2_mt-off_MTS_softseg.nii.gz => sub-oxfordOhba03_flip-2_mt-off_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-oxfordOhba03/anat/{sub-oxfordOhba03_T2w_softseg.json => sub-oxfordOhba03_space-other_T1w_softseg.json} (100%) rename derivatives/labels_softseg/sub-oxfordOhba03/anat/{sub-oxfordOhba03_T1w_softseg.nii.gz => sub-oxfordOhba03_space-other_T1w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-oxfordOhba03/anat/{sub-oxfordOhba03_flip-1_mt-on_MTS_softseg.json => sub-oxfordOhba03_space-other_T2star_softseg.json} (100%) rename derivatives/labels_softseg/sub-oxfordOhba03/anat/{sub-oxfordOhba03_T2star_softseg.nii.gz => sub-oxfordOhba03_space-other_T2star_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-oxfordOhba03/anat/{sub-oxfordOhba03_flip-2_mt-off_MTS_softseg.json => sub-oxfordOhba03_space-other_T2w_softseg.json} (100%) rename derivatives/labels_softseg/sub-oxfordOhba03/anat/{sub-oxfordOhba03_T2w_softseg.nii.gz => sub-oxfordOhba03_space-other_T2w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-oxfordOhba04/anat/{sub-oxfordOhba04_T1w_softseg.json => sub-oxfordOhba04_flip-1_mt-on_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-oxfordOhba04/anat/{sub-oxfordOhba04_flip-1_mt-on_MTS_softseg.nii.gz => sub-oxfordOhba04_flip-1_mt-on_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-oxfordOhba04/anat/{sub-oxfordOhba04_T2star_softseg.json => sub-oxfordOhba04_flip-2_mt-off_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-oxfordOhba04/anat/{sub-oxfordOhba04_flip-2_mt-off_MTS_softseg.nii.gz => sub-oxfordOhba04_flip-2_mt-off_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-oxfordOhba04/anat/{sub-oxfordOhba04_T2w_softseg.json => sub-oxfordOhba04_space-other_T1w_softseg.json} (100%) rename derivatives/labels_softseg/sub-oxfordOhba04/anat/{sub-oxfordOhba04_T1w_softseg.nii.gz => sub-oxfordOhba04_space-other_T1w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-oxfordOhba04/anat/{sub-oxfordOhba04_flip-1_mt-on_MTS_softseg.json => sub-oxfordOhba04_space-other_T2star_softseg.json} (100%) rename derivatives/labels_softseg/sub-oxfordOhba04/anat/{sub-oxfordOhba04_T2star_softseg.nii.gz => sub-oxfordOhba04_space-other_T2star_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-oxfordOhba04/anat/{sub-oxfordOhba04_flip-2_mt-off_MTS_softseg.json => sub-oxfordOhba04_space-other_T2w_softseg.json} (100%) rename derivatives/labels_softseg/sub-oxfordOhba04/anat/{sub-oxfordOhba04_T2w_softseg.nii.gz => sub-oxfordOhba04_space-other_T2w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-oxfordOhba05/anat/{sub-oxfordOhba05_T1w_softseg.json => sub-oxfordOhba05_flip-1_mt-on_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-oxfordOhba05/anat/{sub-oxfordOhba05_flip-1_mt-on_MTS_softseg.nii.gz => sub-oxfordOhba05_flip-1_mt-on_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-oxfordOhba05/anat/{sub-oxfordOhba05_T2star_softseg.json => sub-oxfordOhba05_flip-2_mt-off_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-oxfordOhba05/anat/{sub-oxfordOhba05_flip-2_mt-off_MTS_softseg.nii.gz => sub-oxfordOhba05_flip-2_mt-off_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-oxfordOhba05/anat/{sub-oxfordOhba05_flip-1_mt-on_MTS_softseg.json => sub-oxfordOhba05_space-other_T1w_softseg.json} (100%) rename derivatives/labels_softseg/sub-oxfordOhba05/anat/{sub-oxfordOhba05_T1w_softseg.nii.gz => sub-oxfordOhba05_space-other_T1w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-oxfordOhba05/anat/{sub-oxfordOhba05_flip-2_mt-off_MTS_softseg.json => sub-oxfordOhba05_space-other_T2star_softseg.json} (100%) rename derivatives/labels_softseg/sub-oxfordOhba05/anat/{sub-oxfordOhba05_T2star_softseg.nii.gz => sub-oxfordOhba05_space-other_T2star_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-oxfordOhba05/anat/{sub-oxfordOhba05_T2w_softseg.json => sub-oxfordOhba05_space-other_T2w_softseg.json} (100%) rename derivatives/labels_softseg/sub-oxfordOhba05/anat/{sub-oxfordOhba05_T2w_softseg.nii.gz => sub-oxfordOhba05_space-other_T2w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-pavia01/anat/{sub-pavia01_T1w_softseg.json => sub-pavia01_flip-1_mt-on_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-pavia01/anat/{sub-pavia01_flip-1_mt-on_MTS_softseg.nii.gz => sub-pavia01_flip-1_mt-on_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-pavia01/anat/{sub-pavia01_T2star_softseg.json => sub-pavia01_flip-2_mt-off_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-pavia01/anat/{sub-pavia01_flip-2_mt-off_MTS_softseg.nii.gz => sub-pavia01_flip-2_mt-off_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-pavia01/anat/{sub-pavia01_T2w_softseg.json => sub-pavia01_space-other_T1w_softseg.json} (100%) rename derivatives/labels_softseg/sub-pavia01/anat/{sub-pavia01_T1w_softseg.nii.gz => sub-pavia01_space-other_T1w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-pavia01/anat/{sub-pavia01_flip-1_mt-on_MTS_softseg.json => sub-pavia01_space-other_T2star_softseg.json} (100%) rename derivatives/labels_softseg/sub-pavia01/anat/{sub-pavia01_T2star_softseg.nii.gz => sub-pavia01_space-other_T2star_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-pavia01/anat/{sub-pavia01_flip-2_mt-off_MTS_softseg.json => sub-pavia01_space-other_T2w_softseg.json} (100%) rename derivatives/labels_softseg/sub-pavia01/anat/{sub-pavia01_T2w_softseg.nii.gz => sub-pavia01_space-other_T2w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-pavia02/anat/{sub-pavia02_T1w_softseg.json => sub-pavia02_flip-1_mt-on_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-pavia02/anat/{sub-pavia02_flip-1_mt-on_MTS_softseg.nii.gz => sub-pavia02_flip-1_mt-on_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-pavia02/anat/{sub-pavia02_T2star_softseg.json => sub-pavia02_flip-2_mt-off_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-pavia02/anat/{sub-pavia02_flip-2_mt-off_MTS_softseg.nii.gz => sub-pavia02_flip-2_mt-off_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-pavia02/anat/{sub-pavia02_T2w_softseg.json => sub-pavia02_space-other_T1w_softseg.json} (100%) rename derivatives/labels_softseg/sub-pavia02/anat/{sub-pavia02_T1w_softseg.nii.gz => sub-pavia02_space-other_T1w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-pavia02/anat/{sub-pavia02_flip-1_mt-on_MTS_softseg.json => sub-pavia02_space-other_T2star_softseg.json} (100%) rename derivatives/labels_softseg/sub-pavia02/anat/{sub-pavia02_T2star_softseg.nii.gz => sub-pavia02_space-other_T2star_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-pavia02/anat/{sub-pavia02_flip-2_mt-off_MTS_softseg.json => sub-pavia02_space-other_T2w_softseg.json} (100%) rename derivatives/labels_softseg/sub-pavia02/anat/{sub-pavia02_T2w_softseg.nii.gz => sub-pavia02_space-other_T2w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-pavia03/anat/{sub-pavia03_T1w_softseg.json => sub-pavia03_flip-1_mt-on_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-pavia03/anat/{sub-pavia03_flip-1_mt-on_MTS_softseg.nii.gz => sub-pavia03_flip-1_mt-on_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-pavia03/anat/{sub-pavia03_T2star_softseg.json => sub-pavia03_flip-2_mt-off_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-pavia03/anat/{sub-pavia03_flip-2_mt-off_MTS_softseg.nii.gz => sub-pavia03_flip-2_mt-off_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-pavia03/anat/{sub-pavia03_T2w_softseg.json => sub-pavia03_space-other_T1w_softseg.json} (100%) rename derivatives/labels_softseg/sub-pavia03/anat/{sub-pavia03_T1w_softseg.nii.gz => sub-pavia03_space-other_T1w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-pavia03/anat/{sub-pavia03_flip-1_mt-on_MTS_softseg.json => sub-pavia03_space-other_T2star_softseg.json} (100%) rename derivatives/labels_softseg/sub-pavia03/anat/{sub-pavia03_T2star_softseg.nii.gz => sub-pavia03_space-other_T2star_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-pavia03/anat/{sub-pavia03_flip-2_mt-off_MTS_softseg.json => sub-pavia03_space-other_T2w_softseg.json} (100%) rename derivatives/labels_softseg/sub-pavia03/anat/{sub-pavia03_T2w_softseg.nii.gz => sub-pavia03_space-other_T2w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-pavia04/anat/{sub-pavia04_T1w_softseg.json => sub-pavia04_flip-1_mt-on_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-pavia04/anat/{sub-pavia04_flip-1_mt-on_MTS_softseg.nii.gz => sub-pavia04_flip-1_mt-on_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-pavia04/anat/{sub-pavia04_T2star_softseg.json => sub-pavia04_flip-2_mt-off_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-pavia04/anat/{sub-pavia04_flip-2_mt-off_MTS_softseg.nii.gz => sub-pavia04_flip-2_mt-off_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-pavia04/anat/{sub-pavia04_T2w_softseg.json => sub-pavia04_space-other_T1w_softseg.json} (100%) rename derivatives/labels_softseg/sub-pavia04/anat/{sub-pavia04_T1w_softseg.nii.gz => sub-pavia04_space-other_T1w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-pavia04/anat/{sub-pavia04_flip-1_mt-on_MTS_softseg.json => sub-pavia04_space-other_T2star_softseg.json} (100%) rename derivatives/labels_softseg/sub-pavia04/anat/{sub-pavia04_T2star_softseg.nii.gz => sub-pavia04_space-other_T2star_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-pavia04/anat/{sub-pavia04_flip-2_mt-off_MTS_softseg.json => sub-pavia04_space-other_T2w_softseg.json} (100%) rename derivatives/labels_softseg/sub-pavia04/anat/{sub-pavia04_T2w_softseg.nii.gz => sub-pavia04_space-other_T2w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-pavia05/anat/{sub-pavia05_T1w_softseg.json => sub-pavia05_flip-1_mt-on_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-pavia05/anat/{sub-pavia05_flip-1_mt-on_MTS_softseg.nii.gz => sub-pavia05_flip-1_mt-on_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-pavia05/anat/{sub-pavia05_flip-1_mt-on_MTS_softseg.json => sub-pavia05_flip-2_mt-off_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-pavia05/anat/{sub-pavia05_flip-2_mt-off_MTS_softseg.nii.gz => sub-pavia05_flip-2_mt-off_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-pavia05/anat/{sub-pavia05_flip-2_mt-off_MTS_softseg.json => sub-pavia05_space-other_T1w_softseg.json} (100%) rename derivatives/labels_softseg/sub-pavia05/anat/{sub-pavia05_T1w_softseg.nii.gz => sub-pavia05_space-other_T1w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-pavia05/anat/{sub-pavia05_T2star_softseg.json => sub-pavia05_space-other_T2star_softseg.json} (100%) rename derivatives/labels_softseg/sub-pavia05/anat/{sub-pavia05_T2star_softseg.nii.gz => sub-pavia05_space-other_T2star_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-pavia05/anat/{sub-pavia05_T2w_softseg.json => sub-pavia05_space-other_T2w_softseg.json} (100%) rename derivatives/labels_softseg/sub-pavia05/anat/{sub-pavia05_T2w_softseg.nii.gz => sub-pavia05_space-other_T2w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-pavia06/anat/{sub-pavia06_T1w_softseg.json => sub-pavia06_flip-1_mt-on_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-pavia06/anat/{sub-pavia06_flip-1_mt-on_MTS_softseg.nii.gz => sub-pavia06_flip-1_mt-on_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-pavia06/anat/{sub-pavia06_T2star_softseg.json => sub-pavia06_flip-2_mt-off_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-pavia06/anat/{sub-pavia06_flip-2_mt-off_MTS_softseg.nii.gz => sub-pavia06_flip-2_mt-off_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-pavia06/anat/{sub-pavia06_T2w_softseg.json => sub-pavia06_space-other_T1w_softseg.json} (100%) rename derivatives/labels_softseg/sub-pavia06/anat/{sub-pavia06_T1w_softseg.nii.gz => sub-pavia06_space-other_T1w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-pavia06/anat/{sub-pavia06_flip-1_mt-on_MTS_softseg.json => sub-pavia06_space-other_T2star_softseg.json} (100%) rename derivatives/labels_softseg/sub-pavia06/anat/{sub-pavia06_T2star_softseg.nii.gz => sub-pavia06_space-other_T2star_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-pavia06/anat/{sub-pavia06_flip-2_mt-off_MTS_softseg.json => sub-pavia06_space-other_T2w_softseg.json} (100%) rename derivatives/labels_softseg/sub-pavia06/anat/{sub-pavia06_T2w_softseg.nii.gz => sub-pavia06_space-other_T2w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-perform01/anat/{sub-perform01_T1w_softseg.json => sub-perform01_flip-1_mt-on_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-perform01/anat/{sub-perform01_flip-1_mt-on_MTS_softseg.nii.gz => sub-perform01_flip-1_mt-on_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-perform01/anat/{sub-perform01_T2star_softseg.json => sub-perform01_flip-2_mt-off_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-perform01/anat/{sub-perform01_flip-2_mt-off_MTS_softseg.nii.gz => sub-perform01_flip-2_mt-off_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-perform01/anat/{sub-perform01_T2w_softseg.json => sub-perform01_space-other_T1w_softseg.json} (100%) rename derivatives/labels_softseg/sub-perform01/anat/{sub-perform01_T1w_softseg.nii.gz => sub-perform01_space-other_T1w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-perform01/anat/{sub-perform01_flip-1_mt-on_MTS_softseg.json => sub-perform01_space-other_T2star_softseg.json} (100%) rename derivatives/labels_softseg/sub-perform01/anat/{sub-perform01_T2star_softseg.nii.gz => sub-perform01_space-other_T2star_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-perform01/anat/{sub-perform01_flip-2_mt-off_MTS_softseg.json => sub-perform01_space-other_T2w_softseg.json} (100%) rename derivatives/labels_softseg/sub-perform01/anat/{sub-perform01_T2w_softseg.nii.gz => sub-perform01_space-other_T2w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-perform02/anat/{sub-perform02_T1w_softseg.json => sub-perform02_flip-1_mt-on_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-perform02/anat/{sub-perform02_flip-1_mt-on_MTS_softseg.nii.gz => sub-perform02_flip-1_mt-on_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-perform02/anat/{sub-perform02_T2star_softseg.json => sub-perform02_flip-2_mt-off_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-perform02/anat/{sub-perform02_flip-2_mt-off_MTS_softseg.nii.gz => sub-perform02_flip-2_mt-off_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-perform02/anat/{sub-perform02_T2w_softseg.json => sub-perform02_space-other_T1w_softseg.json} (100%) rename derivatives/labels_softseg/sub-perform02/anat/{sub-perform02_T1w_softseg.nii.gz => sub-perform02_space-other_T1w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-perform02/anat/{sub-perform02_flip-1_mt-on_MTS_softseg.json => sub-perform02_space-other_T2star_softseg.json} (100%) rename derivatives/labels_softseg/sub-perform02/anat/{sub-perform02_T2star_softseg.nii.gz => sub-perform02_space-other_T2star_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-perform02/anat/{sub-perform02_flip-2_mt-off_MTS_softseg.json => sub-perform02_space-other_T2w_softseg.json} (100%) rename derivatives/labels_softseg/sub-perform02/anat/{sub-perform02_T2w_softseg.nii.gz => sub-perform02_space-other_T2w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-perform03/anat/{sub-perform03_flip-1_mt-on_MTS_softseg.json => sub-perform03_flip-1_mt-on_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-perform03/anat/{sub-perform03_flip-1_mt-on_MTS_softseg.nii.gz => sub-perform03_flip-1_mt-on_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-perform03/anat/{sub-perform03_flip-2_mt-off_MTS_softseg.json => sub-perform03_flip-2_mt-off_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-perform03/anat/{sub-perform03_flip-2_mt-off_MTS_softseg.nii.gz => sub-perform03_flip-2_mt-off_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-perform03/anat/{sub-perform03_T1w_softseg.json => sub-perform03_space-other_T1w_softseg.json} (100%) rename derivatives/labels_softseg/sub-perform03/anat/{sub-perform03_T1w_softseg.nii.gz => sub-perform03_space-other_T1w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-perform03/anat/{sub-perform03_T2star_softseg.json => sub-perform03_space-other_T2star_softseg.json} (100%) rename derivatives/labels_softseg/sub-perform03/anat/{sub-perform03_T2star_softseg.nii.gz => sub-perform03_space-other_T2star_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-perform03/anat/{sub-perform03_T2w_softseg.json => sub-perform03_space-other_T2w_softseg.json} (100%) rename derivatives/labels_softseg/sub-perform03/anat/{sub-perform03_T2w_softseg.nii.gz => sub-perform03_space-other_T2w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-perform04/anat/{sub-perform04_T1w_softseg.json => sub-perform04_flip-1_mt-on_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-perform04/anat/{sub-perform04_flip-1_mt-on_MTS_softseg.nii.gz => sub-perform04_flip-1_mt-on_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-perform04/anat/{sub-perform04_T2star_softseg.json => sub-perform04_flip-2_mt-off_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-perform04/anat/{sub-perform04_flip-2_mt-off_MTS_softseg.nii.gz => sub-perform04_flip-2_mt-off_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-perform04/anat/{sub-perform04_T2w_softseg.json => sub-perform04_space-other_T1w_softseg.json} (100%) rename derivatives/labels_softseg/sub-perform04/anat/{sub-perform04_T1w_softseg.nii.gz => sub-perform04_space-other_T1w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-perform04/anat/{sub-perform04_flip-1_mt-on_MTS_softseg.json => sub-perform04_space-other_T2star_softseg.json} (100%) rename derivatives/labels_softseg/sub-perform04/anat/{sub-perform04_T2star_softseg.nii.gz => sub-perform04_space-other_T2star_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-perform04/anat/{sub-perform04_flip-2_mt-off_MTS_softseg.json => sub-perform04_space-other_T2w_softseg.json} (100%) rename derivatives/labels_softseg/sub-perform04/anat/{sub-perform04_T2w_softseg.nii.gz => sub-perform04_space-other_T2w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-perform05/anat/{sub-perform05_T1w_softseg.json => sub-perform05_flip-1_mt-on_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-perform05/anat/{sub-perform05_flip-1_mt-on_MTS_softseg.nii.gz => sub-perform05_flip-1_mt-on_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-perform05/anat/{sub-perform05_T2star_softseg.json => sub-perform05_flip-2_mt-off_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-perform05/anat/{sub-perform05_flip-2_mt-off_MTS_softseg.nii.gz => sub-perform05_flip-2_mt-off_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-perform05/anat/{sub-perform05_T2w_softseg.json => sub-perform05_space-other_T1w_softseg.json} (100%) rename derivatives/labels_softseg/sub-perform05/anat/{sub-perform05_T1w_softseg.nii.gz => sub-perform05_space-other_T1w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-perform05/anat/{sub-perform05_flip-1_mt-on_MTS_softseg.json => sub-perform05_space-other_T2star_softseg.json} (100%) rename derivatives/labels_softseg/sub-perform05/anat/{sub-perform05_T2star_softseg.nii.gz => sub-perform05_space-other_T2star_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-perform05/anat/{sub-perform05_flip-2_mt-off_MTS_softseg.json => sub-perform05_space-other_T2w_softseg.json} (100%) rename derivatives/labels_softseg/sub-perform05/anat/{sub-perform05_T2w_softseg.nii.gz => sub-perform05_space-other_T2w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-perform06/anat/{sub-perform06_T1w_softseg.json => sub-perform06_flip-1_mt-on_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-perform06/anat/{sub-perform06_flip-1_mt-on_MTS_softseg.nii.gz => sub-perform06_flip-1_mt-on_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-perform06/anat/{sub-perform06_T2star_softseg.json => sub-perform06_flip-2_mt-off_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-perform06/anat/{sub-perform06_flip-2_mt-off_MTS_softseg.nii.gz => sub-perform06_flip-2_mt-off_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-perform06/anat/{sub-perform06_T2w_softseg.json => sub-perform06_space-other_T1w_softseg.json} (100%) rename derivatives/labels_softseg/sub-perform06/anat/{sub-perform06_T1w_softseg.nii.gz => sub-perform06_space-other_T1w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-perform06/anat/{sub-perform06_flip-1_mt-on_MTS_softseg.json => sub-perform06_space-other_T2star_softseg.json} (100%) rename derivatives/labels_softseg/sub-perform06/anat/{sub-perform06_T2star_softseg.nii.gz => sub-perform06_space-other_T2star_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-perform06/anat/{sub-perform06_flip-2_mt-off_MTS_softseg.json => sub-perform06_space-other_T2w_softseg.json} (100%) rename derivatives/labels_softseg/sub-perform06/anat/{sub-perform06_T2w_softseg.nii.gz => sub-perform06_space-other_T2w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-queensland01/anat/{sub-queensland01_flip-1_mt-on_MTS_softseg.json => sub-queensland01_flip-1_mt-on_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-queensland01/anat/{sub-queensland01_flip-1_mt-on_MTS_softseg.nii.gz => sub-queensland01_flip-1_mt-on_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-queensland01/anat/{sub-queensland01_flip-2_mt-off_MTS_softseg.json => sub-queensland01_flip-2_mt-off_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-queensland01/anat/{sub-queensland01_flip-2_mt-off_MTS_softseg.nii.gz => sub-queensland01_flip-2_mt-off_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-queensland01/anat/{sub-queensland01_T1w_softseg.json => sub-queensland01_space-other_T1w_softseg.json} (100%) rename derivatives/labels_softseg/sub-queensland01/anat/{sub-queensland01_T1w_softseg.nii.gz => sub-queensland01_space-other_T1w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-queensland01/anat/{sub-queensland01_T2star_softseg.json => sub-queensland01_space-other_T2star_softseg.json} (100%) rename derivatives/labels_softseg/sub-queensland01/anat/{sub-queensland01_T2star_softseg.nii.gz => sub-queensland01_space-other_T2star_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-queensland01/anat/{sub-queensland01_T2w_softseg.json => sub-queensland01_space-other_T2w_softseg.json} (100%) rename derivatives/labels_softseg/sub-queensland01/anat/{sub-queensland01_T2w_softseg.nii.gz => sub-queensland01_space-other_T2w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-queensland02/anat/{sub-queensland02_T1w_softseg.json => sub-queensland02_flip-1_mt-on_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-queensland02/anat/{sub-queensland02_flip-1_mt-on_MTS_softseg.nii.gz => sub-queensland02_flip-1_mt-on_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-queensland02/anat/{sub-queensland02_T2star_softseg.json => sub-queensland02_flip-2_mt-off_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-queensland02/anat/{sub-queensland02_flip-2_mt-off_MTS_softseg.nii.gz => sub-queensland02_flip-2_mt-off_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-queensland02/anat/{sub-queensland02_T2w_softseg.json => sub-queensland02_space-other_T1w_softseg.json} (100%) rename derivatives/labels_softseg/sub-queensland02/anat/{sub-queensland02_T1w_softseg.nii.gz => sub-queensland02_space-other_T1w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-queensland02/anat/{sub-queensland02_flip-1_mt-on_MTS_softseg.json => sub-queensland02_space-other_T2star_softseg.json} (100%) rename derivatives/labels_softseg/sub-queensland02/anat/{sub-queensland02_T2star_softseg.nii.gz => sub-queensland02_space-other_T2star_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-queensland02/anat/{sub-queensland02_flip-2_mt-off_MTS_softseg.json => sub-queensland02_space-other_T2w_softseg.json} (100%) rename derivatives/labels_softseg/sub-queensland02/anat/{sub-queensland02_T2w_softseg.nii.gz => sub-queensland02_space-other_T2w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-queensland03/anat/{sub-queensland03_T1w_softseg.json => sub-queensland03_flip-1_mt-on_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-queensland03/anat/{sub-queensland03_flip-1_mt-on_MTS_softseg.nii.gz => sub-queensland03_flip-1_mt-on_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-queensland03/anat/{sub-queensland03_T2star_softseg.json => sub-queensland03_flip-2_mt-off_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-queensland03/anat/{sub-queensland03_flip-2_mt-off_MTS_softseg.nii.gz => sub-queensland03_flip-2_mt-off_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-queensland03/anat/{sub-queensland03_T2w_softseg.json => sub-queensland03_space-other_T1w_softseg.json} (100%) rename derivatives/labels_softseg/sub-queensland03/anat/{sub-queensland03_T1w_softseg.nii.gz => sub-queensland03_space-other_T1w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-queensland03/anat/{sub-queensland03_flip-1_mt-on_MTS_softseg.json => sub-queensland03_space-other_T2star_softseg.json} (100%) rename derivatives/labels_softseg/sub-queensland03/anat/{sub-queensland03_T2star_softseg.nii.gz => sub-queensland03_space-other_T2star_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-queensland03/anat/{sub-queensland03_flip-2_mt-off_MTS_softseg.json => sub-queensland03_space-other_T2w_softseg.json} (100%) rename derivatives/labels_softseg/sub-queensland03/anat/{sub-queensland03_T2w_softseg.nii.gz => sub-queensland03_space-other_T2w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-queensland04/anat/{sub-queensland04_T1w_softseg.json => sub-queensland04_flip-1_mt-on_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-queensland04/anat/{sub-queensland04_flip-1_mt-on_MTS_softseg.nii.gz => sub-queensland04_flip-1_mt-on_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-queensland04/anat/{sub-queensland04_T2star_softseg.json => sub-queensland04_flip-2_mt-off_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-queensland04/anat/{sub-queensland04_flip-2_mt-off_MTS_softseg.nii.gz => sub-queensland04_flip-2_mt-off_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-queensland04/anat/{sub-queensland04_T2w_softseg.json => sub-queensland04_space-other_T1w_softseg.json} (100%) rename derivatives/labels_softseg/sub-queensland04/anat/{sub-queensland04_T1w_softseg.nii.gz => sub-queensland04_space-other_T1w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-queensland04/anat/{sub-queensland04_flip-1_mt-on_MTS_softseg.json => sub-queensland04_space-other_T2star_softseg.json} (100%) rename derivatives/labels_softseg/sub-queensland04/anat/{sub-queensland04_T2star_softseg.nii.gz => sub-queensland04_space-other_T2star_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-queensland04/anat/{sub-queensland04_flip-2_mt-off_MTS_softseg.json => sub-queensland04_space-other_T2w_softseg.json} (100%) rename derivatives/labels_softseg/sub-queensland04/anat/{sub-queensland04_T2w_softseg.nii.gz => sub-queensland04_space-other_T2w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-queensland05/anat/{sub-queensland05_flip-1_mt-on_MTS_softseg.json => sub-queensland05_flip-1_mt-on_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-queensland05/anat/{sub-queensland05_flip-1_mt-on_MTS_softseg.nii.gz => sub-queensland05_flip-1_mt-on_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-queensland05/anat/{sub-queensland05_T1w_softseg.json => sub-queensland05_flip-2_mt-off_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-queensland05/anat/{sub-queensland05_flip-2_mt-off_MTS_softseg.nii.gz => sub-queensland05_flip-2_mt-off_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-queensland05/anat/{sub-queensland05_T2star_softseg.json => sub-queensland05_space-other_T1w_softseg.json} (100%) rename derivatives/labels_softseg/sub-queensland05/anat/{sub-queensland05_T1w_softseg.nii.gz => sub-queensland05_space-other_T1w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-queensland05/anat/{sub-queensland05_T2w_softseg.json => sub-queensland05_space-other_T2star_softseg.json} (100%) rename derivatives/labels_softseg/sub-queensland05/anat/{sub-queensland05_T2star_softseg.nii.gz => sub-queensland05_space-other_T2star_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-queensland05/anat/{sub-queensland05_flip-2_mt-off_MTS_softseg.json => sub-queensland05_space-other_T2w_softseg.json} (100%) rename derivatives/labels_softseg/sub-queensland05/anat/{sub-queensland05_T2w_softseg.nii.gz => sub-queensland05_space-other_T2w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-queensland06/anat/{sub-queensland06_T1w_softseg.json => sub-queensland06_flip-1_mt-on_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-queensland06/anat/{sub-queensland06_flip-1_mt-on_MTS_softseg.nii.gz => sub-queensland06_flip-1_mt-on_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-queensland06/anat/{sub-queensland06_T2star_softseg.json => sub-queensland06_flip-2_mt-off_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-queensland06/anat/{sub-queensland06_flip-2_mt-off_MTS_softseg.nii.gz => sub-queensland06_flip-2_mt-off_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-queensland06/anat/{sub-queensland06_T2w_softseg.json => sub-queensland06_space-other_T1w_softseg.json} (100%) rename derivatives/labels_softseg/sub-queensland06/anat/{sub-queensland06_T1w_softseg.nii.gz => sub-queensland06_space-other_T1w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-queensland06/anat/{sub-queensland06_flip-1_mt-on_MTS_softseg.json => sub-queensland06_space-other_T2star_softseg.json} (100%) rename derivatives/labels_softseg/sub-queensland06/anat/{sub-queensland06_T2star_softseg.nii.gz => sub-queensland06_space-other_T2star_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-queensland06/anat/{sub-queensland06_flip-2_mt-off_MTS_softseg.json => sub-queensland06_space-other_T2w_softseg.json} (100%) rename derivatives/labels_softseg/sub-queensland06/anat/{sub-queensland06_T2w_softseg.nii.gz => sub-queensland06_space-other_T2w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-sherbrooke01/anat/{sub-sherbrooke01_T1w_softseg.json => sub-sherbrooke01_flip-1_mt-on_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-sherbrooke01/anat/{sub-sherbrooke01_flip-1_mt-on_MTS_softseg.nii.gz => sub-sherbrooke01_flip-1_mt-on_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-sherbrooke01/anat/{sub-sherbrooke01_T2star_softseg.json => sub-sherbrooke01_flip-2_mt-off_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-sherbrooke01/anat/{sub-sherbrooke01_flip-2_mt-off_MTS_softseg.nii.gz => sub-sherbrooke01_flip-2_mt-off_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-sherbrooke01/anat/{sub-sherbrooke01_T2w_softseg.json => sub-sherbrooke01_space-other_T1w_softseg.json} (100%) rename derivatives/labels_softseg/sub-sherbrooke01/anat/{sub-sherbrooke01_T1w_softseg.nii.gz => sub-sherbrooke01_space-other_T1w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-sherbrooke01/anat/{sub-sherbrooke01_flip-1_mt-on_MTS_softseg.json => sub-sherbrooke01_space-other_T2star_softseg.json} (100%) rename derivatives/labels_softseg/sub-sherbrooke01/anat/{sub-sherbrooke01_T2star_softseg.nii.gz => sub-sherbrooke01_space-other_T2star_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-sherbrooke01/anat/{sub-sherbrooke01_flip-2_mt-off_MTS_softseg.json => sub-sherbrooke01_space-other_T2w_softseg.json} (100%) rename derivatives/labels_softseg/sub-sherbrooke01/anat/{sub-sherbrooke01_T2w_softseg.nii.gz => sub-sherbrooke01_space-other_T2w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-sherbrooke02/anat/{sub-sherbrooke02_flip-1_mt-on_MTS_softseg.json => sub-sherbrooke02_flip-1_mt-on_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-sherbrooke02/anat/{sub-sherbrooke02_flip-1_mt-on_MTS_softseg.nii.gz => sub-sherbrooke02_flip-1_mt-on_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-sherbrooke02/anat/{sub-sherbrooke02_flip-2_mt-off_MTS_softseg.json => sub-sherbrooke02_flip-2_mt-off_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-sherbrooke02/anat/{sub-sherbrooke02_flip-2_mt-off_MTS_softseg.nii.gz => sub-sherbrooke02_flip-2_mt-off_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-sherbrooke02/anat/{sub-sherbrooke02_T1w_softseg.json => sub-sherbrooke02_space-other_T1w_softseg.json} (100%) rename derivatives/labels_softseg/sub-sherbrooke02/anat/{sub-sherbrooke02_T1w_softseg.nii.gz => sub-sherbrooke02_space-other_T1w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-sherbrooke02/anat/{sub-sherbrooke02_T2star_softseg.json => sub-sherbrooke02_space-other_T2star_softseg.json} (100%) rename derivatives/labels_softseg/sub-sherbrooke02/anat/{sub-sherbrooke02_T2star_softseg.nii.gz => sub-sherbrooke02_space-other_T2star_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-sherbrooke02/anat/{sub-sherbrooke02_T2w_softseg.json => sub-sherbrooke02_space-other_T2w_softseg.json} (100%) rename derivatives/labels_softseg/sub-sherbrooke02/anat/{sub-sherbrooke02_T2w_softseg.nii.gz => sub-sherbrooke02_space-other_T2w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-sherbrooke03/anat/{sub-sherbrooke03_T1w_softseg.json => sub-sherbrooke03_flip-1_mt-on_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-sherbrooke03/anat/{sub-sherbrooke03_flip-1_mt-on_MTS_softseg.nii.gz => sub-sherbrooke03_flip-1_mt-on_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-sherbrooke03/anat/{sub-sherbrooke03_T2star_softseg.json => sub-sherbrooke03_flip-2_mt-off_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-sherbrooke03/anat/{sub-sherbrooke03_flip-2_mt-off_MTS_softseg.nii.gz => sub-sherbrooke03_flip-2_mt-off_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-sherbrooke03/anat/{sub-sherbrooke03_T2w_softseg.json => sub-sherbrooke03_space-other_T1w_softseg.json} (100%) rename derivatives/labels_softseg/sub-sherbrooke03/anat/{sub-sherbrooke03_T1w_softseg.nii.gz => sub-sherbrooke03_space-other_T1w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-sherbrooke03/anat/{sub-sherbrooke03_flip-1_mt-on_MTS_softseg.json => sub-sherbrooke03_space-other_T2star_softseg.json} (100%) rename derivatives/labels_softseg/sub-sherbrooke03/anat/{sub-sherbrooke03_T2star_softseg.nii.gz => sub-sherbrooke03_space-other_T2star_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-sherbrooke03/anat/{sub-sherbrooke03_flip-2_mt-off_MTS_softseg.json => sub-sherbrooke03_space-other_T2w_softseg.json} (100%) rename derivatives/labels_softseg/sub-sherbrooke03/anat/{sub-sherbrooke03_T2w_softseg.nii.gz => sub-sherbrooke03_space-other_T2w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-sherbrooke04/anat/{sub-sherbrooke04_T1w_softseg.json => sub-sherbrooke04_flip-1_mt-on_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-sherbrooke04/anat/{sub-sherbrooke04_flip-1_mt-on_MTS_softseg.nii.gz => sub-sherbrooke04_flip-1_mt-on_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-sherbrooke04/anat/{sub-sherbrooke04_T2star_softseg.json => sub-sherbrooke04_flip-2_mt-off_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-sherbrooke04/anat/{sub-sherbrooke04_flip-2_mt-off_MTS_softseg.nii.gz => sub-sherbrooke04_flip-2_mt-off_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-sherbrooke04/anat/{sub-sherbrooke04_T2w_softseg.json => sub-sherbrooke04_space-other_T1w_softseg.json} (100%) rename derivatives/labels_softseg/sub-sherbrooke04/anat/{sub-sherbrooke04_T1w_softseg.nii.gz => sub-sherbrooke04_space-other_T1w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-sherbrooke04/anat/{sub-sherbrooke04_flip-1_mt-on_MTS_softseg.json => sub-sherbrooke04_space-other_T2star_softseg.json} (100%) rename derivatives/labels_softseg/sub-sherbrooke04/anat/{sub-sherbrooke04_T2star_softseg.nii.gz => sub-sherbrooke04_space-other_T2star_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-sherbrooke04/anat/{sub-sherbrooke04_flip-2_mt-off_MTS_softseg.json => sub-sherbrooke04_space-other_T2w_softseg.json} (100%) rename derivatives/labels_softseg/sub-sherbrooke04/anat/{sub-sherbrooke04_T2w_softseg.nii.gz => sub-sherbrooke04_space-other_T2w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-sherbrooke05/anat/{sub-sherbrooke05_T1w_softseg.json => sub-sherbrooke05_flip-1_mt-on_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-sherbrooke05/anat/{sub-sherbrooke05_flip-1_mt-on_MTS_softseg.nii.gz => sub-sherbrooke05_flip-1_mt-on_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-sherbrooke05/anat/{sub-sherbrooke05_T2star_softseg.json => sub-sherbrooke05_flip-2_mt-off_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-sherbrooke05/anat/{sub-sherbrooke05_flip-2_mt-off_MTS_softseg.nii.gz => sub-sherbrooke05_flip-2_mt-off_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-sherbrooke05/anat/{sub-sherbrooke05_T2w_softseg.json => sub-sherbrooke05_space-other_T1w_softseg.json} (100%) rename derivatives/labels_softseg/sub-sherbrooke05/anat/{sub-sherbrooke05_T1w_softseg.nii.gz => sub-sherbrooke05_space-other_T1w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-sherbrooke05/anat/{sub-sherbrooke05_flip-1_mt-on_MTS_softseg.json => sub-sherbrooke05_space-other_T2star_softseg.json} (100%) rename derivatives/labels_softseg/sub-sherbrooke05/anat/{sub-sherbrooke05_T2star_softseg.nii.gz => sub-sherbrooke05_space-other_T2star_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-sherbrooke05/anat/{sub-sherbrooke05_flip-2_mt-off_MTS_softseg.json => sub-sherbrooke05_space-other_T2w_softseg.json} (100%) rename derivatives/labels_softseg/sub-sherbrooke05/anat/{sub-sherbrooke05_T2w_softseg.nii.gz => sub-sherbrooke05_space-other_T2w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-sherbrooke06/anat/{sub-sherbrooke06_flip-1_mt-on_MTS_softseg.json => sub-sherbrooke06_flip-1_mt-on_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-sherbrooke06/anat/{sub-sherbrooke06_flip-1_mt-on_MTS_softseg.nii.gz => sub-sherbrooke06_flip-1_mt-on_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-sherbrooke06/anat/{sub-sherbrooke06_flip-2_mt-off_MTS_softseg.json => sub-sherbrooke06_flip-2_mt-off_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-sherbrooke06/anat/{sub-sherbrooke06_flip-2_mt-off_MTS_softseg.nii.gz => sub-sherbrooke06_flip-2_mt-off_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-sherbrooke06/anat/{sub-sherbrooke06_T1w_softseg.json => sub-sherbrooke06_space-other_T1w_softseg.json} (100%) rename derivatives/labels_softseg/sub-sherbrooke06/anat/{sub-sherbrooke06_T1w_softseg.nii.gz => sub-sherbrooke06_space-other_T1w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-sherbrooke06/anat/{sub-sherbrooke06_T2star_softseg.json => sub-sherbrooke06_space-other_T2star_softseg.json} (100%) rename derivatives/labels_softseg/sub-sherbrooke06/anat/{sub-sherbrooke06_T2star_softseg.nii.gz => sub-sherbrooke06_space-other_T2star_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-sherbrooke06/anat/{sub-sherbrooke06_T2w_softseg.json => sub-sherbrooke06_space-other_T2w_softseg.json} (100%) rename derivatives/labels_softseg/sub-sherbrooke06/anat/{sub-sherbrooke06_T2w_softseg.nii.gz => sub-sherbrooke06_space-other_T2w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-sherbrooke07/anat/{sub-sherbrooke07_T1w_softseg.json => sub-sherbrooke07_flip-1_mt-on_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-sherbrooke07/anat/{sub-sherbrooke07_flip-1_mt-on_MTS_softseg.nii.gz => sub-sherbrooke07_flip-1_mt-on_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-sherbrooke07/anat/{sub-sherbrooke07_T2star_softseg.json => sub-sherbrooke07_flip-2_mt-off_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-sherbrooke07/anat/{sub-sherbrooke07_flip-2_mt-off_MTS_softseg.nii.gz => sub-sherbrooke07_flip-2_mt-off_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-sherbrooke07/anat/{sub-sherbrooke07_T2w_softseg.json => sub-sherbrooke07_space-other_T1w_softseg.json} (100%) rename derivatives/labels_softseg/sub-sherbrooke07/anat/{sub-sherbrooke07_T1w_softseg.nii.gz => sub-sherbrooke07_space-other_T1w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-sherbrooke07/anat/{sub-sherbrooke07_flip-1_mt-on_MTS_softseg.json => sub-sherbrooke07_space-other_T2star_softseg.json} (100%) rename derivatives/labels_softseg/sub-sherbrooke07/anat/{sub-sherbrooke07_T2star_softseg.nii.gz => sub-sherbrooke07_space-other_T2star_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-sherbrooke07/anat/{sub-sherbrooke07_flip-2_mt-off_MTS_softseg.json => sub-sherbrooke07_space-other_T2w_softseg.json} (100%) rename derivatives/labels_softseg/sub-sherbrooke07/anat/{sub-sherbrooke07_T2w_softseg.nii.gz => sub-sherbrooke07_space-other_T2w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-stanford01/anat/{sub-stanford01_T1w_softseg.json => sub-stanford01_flip-1_mt-on_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-stanford01/anat/{sub-stanford01_flip-1_mt-on_MTS_softseg.nii.gz => sub-stanford01_flip-1_mt-on_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-stanford01/anat/{sub-stanford01_T2star_softseg.json => sub-stanford01_flip-2_mt-off_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-stanford01/anat/{sub-stanford01_flip-2_mt-off_MTS_softseg.nii.gz => sub-stanford01_flip-2_mt-off_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-stanford01/anat/{sub-stanford01_T2w_softseg.json => sub-stanford01_space-other_T1w_softseg.json} (100%) rename derivatives/labels_softseg/sub-stanford01/anat/{sub-stanford01_T1w_softseg.nii.gz => sub-stanford01_space-other_T1w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-stanford01/anat/{sub-stanford01_flip-1_mt-on_MTS_softseg.json => sub-stanford01_space-other_T2star_softseg.json} (100%) rename derivatives/labels_softseg/sub-stanford01/anat/{sub-stanford01_T2star_softseg.nii.gz => sub-stanford01_space-other_T2star_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-stanford01/anat/{sub-stanford01_flip-2_mt-off_MTS_softseg.json => sub-stanford01_space-other_T2w_softseg.json} (100%) rename derivatives/labels_softseg/sub-stanford01/anat/{sub-stanford01_T2w_softseg.nii.gz => sub-stanford01_space-other_T2w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-stanford02/anat/{sub-stanford02_T1w_softseg.json => sub-stanford02_flip-1_mt-on_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-stanford02/anat/{sub-stanford02_flip-1_mt-on_MTS_softseg.nii.gz => sub-stanford02_flip-1_mt-on_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-stanford02/anat/{sub-stanford02_T2star_softseg.json => sub-stanford02_flip-2_mt-off_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-stanford02/anat/{sub-stanford02_flip-2_mt-off_MTS_softseg.nii.gz => sub-stanford02_flip-2_mt-off_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-stanford02/anat/{sub-stanford02_T2w_softseg.json => sub-stanford02_space-other_T1w_softseg.json} (100%) rename derivatives/labels_softseg/sub-stanford02/anat/{sub-stanford02_T1w_softseg.nii.gz => sub-stanford02_space-other_T1w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-stanford02/anat/{sub-stanford02_flip-1_mt-on_MTS_softseg.json => sub-stanford02_space-other_T2star_softseg.json} (100%) rename derivatives/labels_softseg/sub-stanford02/anat/{sub-stanford02_T2star_softseg.nii.gz => sub-stanford02_space-other_T2star_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-stanford02/anat/{sub-stanford02_flip-2_mt-off_MTS_softseg.json => sub-stanford02_space-other_T2w_softseg.json} (100%) rename derivatives/labels_softseg/sub-stanford02/anat/{sub-stanford02_T2w_softseg.nii.gz => sub-stanford02_space-other_T2w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-stanford03/anat/{sub-stanford03_T1w_softseg.json => sub-stanford03_flip-1_mt-on_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-stanford03/anat/{sub-stanford03_flip-1_mt-on_MTS_softseg.nii.gz => sub-stanford03_flip-1_mt-on_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-stanford03/anat/{sub-stanford03_T2star_softseg.json => sub-stanford03_flip-2_mt-off_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-stanford03/anat/{sub-stanford03_flip-2_mt-off_MTS_softseg.nii.gz => sub-stanford03_flip-2_mt-off_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-stanford03/anat/{sub-stanford03_T2w_softseg.json => sub-stanford03_space-other_T1w_softseg.json} (100%) rename derivatives/labels_softseg/sub-stanford03/anat/{sub-stanford03_T1w_softseg.nii.gz => sub-stanford03_space-other_T1w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-stanford03/anat/{sub-stanford03_flip-1_mt-on_MTS_softseg.json => sub-stanford03_space-other_T2star_softseg.json} (100%) rename derivatives/labels_softseg/sub-stanford03/anat/{sub-stanford03_T2star_softseg.nii.gz => sub-stanford03_space-other_T2star_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-stanford03/anat/{sub-stanford03_flip-2_mt-off_MTS_softseg.json => sub-stanford03_space-other_T2w_softseg.json} (100%) rename derivatives/labels_softseg/sub-stanford03/anat/{sub-stanford03_T2w_softseg.nii.gz => sub-stanford03_space-other_T2w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-stanford04/anat/{sub-stanford04_T1w_softseg.json => sub-stanford04_flip-1_mt-on_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-stanford04/anat/{sub-stanford04_flip-1_mt-on_MTS_softseg.nii.gz => sub-stanford04_flip-1_mt-on_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-stanford04/anat/{sub-stanford04_T2star_softseg.json => sub-stanford04_flip-2_mt-off_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-stanford04/anat/{sub-stanford04_flip-2_mt-off_MTS_softseg.nii.gz => sub-stanford04_flip-2_mt-off_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-stanford04/anat/{sub-stanford04_T2w_softseg.json => sub-stanford04_space-other_T1w_softseg.json} (100%) rename derivatives/labels_softseg/sub-stanford04/anat/{sub-stanford04_T1w_softseg.nii.gz => sub-stanford04_space-other_T1w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-stanford04/anat/{sub-stanford04_flip-1_mt-on_MTS_softseg.json => sub-stanford04_space-other_T2star_softseg.json} (100%) rename derivatives/labels_softseg/sub-stanford04/anat/{sub-stanford04_T2star_softseg.nii.gz => sub-stanford04_space-other_T2star_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-stanford04/anat/{sub-stanford04_flip-2_mt-off_MTS_softseg.json => sub-stanford04_space-other_T2w_softseg.json} (100%) rename derivatives/labels_softseg/sub-stanford04/anat/{sub-stanford04_T2w_softseg.nii.gz => sub-stanford04_space-other_T2w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-stanford05/anat/{sub-stanford05_T1w_softseg.json => sub-stanford05_flip-1_mt-on_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-stanford05/anat/{sub-stanford05_flip-1_mt-on_MTS_softseg.nii.gz => sub-stanford05_flip-1_mt-on_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-stanford05/anat/{sub-stanford05_T2star_softseg.json => sub-stanford05_flip-2_mt-off_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-stanford05/anat/{sub-stanford05_flip-2_mt-off_MTS_softseg.nii.gz => sub-stanford05_flip-2_mt-off_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-stanford05/anat/{sub-stanford05_T2w_softseg.json => sub-stanford05_space-other_T1w_softseg.json} (100%) rename derivatives/labels_softseg/sub-stanford05/anat/{sub-stanford05_T1w_softseg.nii.gz => sub-stanford05_space-other_T1w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-stanford05/anat/{sub-stanford05_flip-1_mt-on_MTS_softseg.json => sub-stanford05_space-other_T2star_softseg.json} (100%) rename derivatives/labels_softseg/sub-stanford05/anat/{sub-stanford05_T2star_softseg.nii.gz => sub-stanford05_space-other_T2star_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-stanford05/anat/{sub-stanford05_flip-2_mt-off_MTS_softseg.json => sub-stanford05_space-other_T2w_softseg.json} (100%) rename derivatives/labels_softseg/sub-stanford05/anat/{sub-stanford05_T2w_softseg.nii.gz => sub-stanford05_space-other_T2w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-stanford06/anat/{sub-stanford06_T1w_softseg.json => sub-stanford06_flip-1_mt-on_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-stanford06/anat/{sub-stanford06_flip-1_mt-on_MTS_softseg.nii.gz => sub-stanford06_flip-1_mt-on_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-stanford06/anat/{sub-stanford06_T2star_softseg.json => sub-stanford06_flip-2_mt-off_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-stanford06/anat/{sub-stanford06_flip-2_mt-off_MTS_softseg.nii.gz => sub-stanford06_flip-2_mt-off_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-stanford06/anat/{sub-stanford06_T2w_softseg.json => sub-stanford06_space-other_T1w_softseg.json} (100%) rename derivatives/labels_softseg/sub-stanford06/anat/{sub-stanford06_T1w_softseg.nii.gz => sub-stanford06_space-other_T1w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-stanford06/anat/{sub-stanford06_flip-1_mt-on_MTS_softseg.json => sub-stanford06_space-other_T2star_softseg.json} (100%) rename derivatives/labels_softseg/sub-stanford06/anat/{sub-stanford06_T2star_softseg.nii.gz => sub-stanford06_space-other_T2star_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-stanford06/anat/{sub-stanford06_flip-2_mt-off_MTS_softseg.json => sub-stanford06_space-other_T2w_softseg.json} (100%) rename derivatives/labels_softseg/sub-stanford06/anat/{sub-stanford06_T2w_softseg.nii.gz => sub-stanford06_space-other_T2w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-strasbourg01/anat/{sub-strasbourg01_T1w_softseg.json => sub-strasbourg01_flip-1_mt-on_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-strasbourg01/anat/{sub-strasbourg01_flip-1_mt-on_MTS_softseg.nii.gz => sub-strasbourg01_flip-1_mt-on_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-strasbourg01/anat/{sub-strasbourg01_flip-1_mt-on_MTS_softseg.json => sub-strasbourg01_flip-2_mt-off_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-strasbourg01/anat/{sub-strasbourg01_flip-2_mt-off_MTS_softseg.nii.gz => sub-strasbourg01_flip-2_mt-off_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-strasbourg01/anat/{sub-strasbourg01_flip-2_mt-off_MTS_softseg.json => sub-strasbourg01_space-other_T1w_softseg.json} (100%) rename derivatives/labels_softseg/sub-strasbourg01/anat/{sub-strasbourg01_T1w_softseg.nii.gz => sub-strasbourg01_space-other_T1w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-strasbourg01/anat/{sub-strasbourg01_T2star_softseg.json => sub-strasbourg01_space-other_T2star_softseg.json} (100%) rename derivatives/labels_softseg/sub-strasbourg01/anat/{sub-strasbourg01_T2star_softseg.nii.gz => sub-strasbourg01_space-other_T2star_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-strasbourg01/anat/{sub-strasbourg01_T2w_softseg.json => sub-strasbourg01_space-other_T2w_softseg.json} (100%) rename derivatives/labels_softseg/sub-strasbourg01/anat/{sub-strasbourg01_T2w_softseg.nii.gz => sub-strasbourg01_space-other_T2w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-strasbourg02/anat/{sub-strasbourg02_T1w_softseg.json => sub-strasbourg02_flip-1_mt-on_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-strasbourg02/anat/{sub-strasbourg02_flip-1_mt-on_MTS_softseg.nii.gz => sub-strasbourg02_flip-1_mt-on_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-strasbourg02/anat/{sub-strasbourg02_T2star_softseg.json => sub-strasbourg02_flip-2_mt-off_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-strasbourg02/anat/{sub-strasbourg02_flip-2_mt-off_MTS_softseg.nii.gz => sub-strasbourg02_flip-2_mt-off_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-strasbourg02/anat/{sub-strasbourg02_T2w_softseg.json => sub-strasbourg02_space-other_T1w_softseg.json} (100%) rename derivatives/labels_softseg/sub-strasbourg02/anat/{sub-strasbourg02_T1w_softseg.nii.gz => sub-strasbourg02_space-other_T1w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-strasbourg02/anat/{sub-strasbourg02_flip-1_mt-on_MTS_softseg.json => sub-strasbourg02_space-other_T2star_softseg.json} (100%) rename derivatives/labels_softseg/sub-strasbourg02/anat/{sub-strasbourg02_T2star_softseg.nii.gz => sub-strasbourg02_space-other_T2star_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-strasbourg02/anat/{sub-strasbourg02_flip-2_mt-off_MTS_softseg.json => sub-strasbourg02_space-other_T2w_softseg.json} (100%) rename derivatives/labels_softseg/sub-strasbourg02/anat/{sub-strasbourg02_T2w_softseg.nii.gz => sub-strasbourg02_space-other_T2w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-strasbourg03/anat/{sub-strasbourg03_T1w_softseg.json => sub-strasbourg03_flip-1_mt-on_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-strasbourg03/anat/{sub-strasbourg03_flip-1_mt-on_MTS_softseg.nii.gz => sub-strasbourg03_flip-1_mt-on_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-strasbourg03/anat/{sub-strasbourg03_T2star_softseg.json => sub-strasbourg03_flip-2_mt-off_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-strasbourg03/anat/{sub-strasbourg03_flip-2_mt-off_MTS_softseg.nii.gz => sub-strasbourg03_flip-2_mt-off_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-strasbourg03/anat/{sub-strasbourg03_T2w_softseg.json => sub-strasbourg03_space-other_T1w_softseg.json} (100%) rename derivatives/labels_softseg/sub-strasbourg03/anat/{sub-strasbourg03_T1w_softseg.nii.gz => sub-strasbourg03_space-other_T1w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-strasbourg03/anat/{sub-strasbourg03_flip-1_mt-on_MTS_softseg.json => sub-strasbourg03_space-other_T2star_softseg.json} (100%) rename derivatives/labels_softseg/sub-strasbourg03/anat/{sub-strasbourg03_T2star_softseg.nii.gz => sub-strasbourg03_space-other_T2star_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-strasbourg03/anat/{sub-strasbourg03_flip-2_mt-off_MTS_softseg.json => sub-strasbourg03_space-other_T2w_softseg.json} (100%) rename derivatives/labels_softseg/sub-strasbourg03/anat/{sub-strasbourg03_T2w_softseg.nii.gz => sub-strasbourg03_space-other_T2w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-strasbourg04/anat/{sub-strasbourg04_T1w_softseg.json => sub-strasbourg04_flip-1_mt-on_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-strasbourg04/anat/{sub-strasbourg04_flip-1_mt-on_MTS_softseg.nii.gz => sub-strasbourg04_flip-1_mt-on_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-strasbourg04/anat/{sub-strasbourg04_T2star_softseg.json => sub-strasbourg04_flip-2_mt-off_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-strasbourg04/anat/{sub-strasbourg04_flip-2_mt-off_MTS_softseg.nii.gz => sub-strasbourg04_flip-2_mt-off_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-strasbourg04/anat/{sub-strasbourg04_T2w_softseg.json => sub-strasbourg04_space-other_T1w_softseg.json} (100%) rename derivatives/labels_softseg/sub-strasbourg04/anat/{sub-strasbourg04_T1w_softseg.nii.gz => sub-strasbourg04_space-other_T1w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-strasbourg04/anat/{sub-strasbourg04_flip-1_mt-on_MTS_softseg.json => sub-strasbourg04_space-other_T2star_softseg.json} (100%) rename derivatives/labels_softseg/sub-strasbourg04/anat/{sub-strasbourg04_T2star_softseg.nii.gz => sub-strasbourg04_space-other_T2star_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-strasbourg04/anat/{sub-strasbourg04_flip-2_mt-off_MTS_softseg.json => sub-strasbourg04_space-other_T2w_softseg.json} (100%) rename derivatives/labels_softseg/sub-strasbourg04/anat/{sub-strasbourg04_T2w_softseg.nii.gz => sub-strasbourg04_space-other_T2w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-strasbourg05/anat/{sub-strasbourg05_T1w_softseg.json => sub-strasbourg05_flip-1_mt-on_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-strasbourg05/anat/{sub-strasbourg05_flip-1_mt-on_MTS_softseg.nii.gz => sub-strasbourg05_flip-1_mt-on_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-strasbourg05/anat/{sub-strasbourg05_T2star_softseg.json => sub-strasbourg05_flip-2_mt-off_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-strasbourg05/anat/{sub-strasbourg05_flip-2_mt-off_MTS_softseg.nii.gz => sub-strasbourg05_flip-2_mt-off_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-strasbourg05/anat/{sub-strasbourg05_T2w_softseg.json => sub-strasbourg05_space-other_T1w_softseg.json} (100%) rename derivatives/labels_softseg/sub-strasbourg05/anat/{sub-strasbourg05_T1w_softseg.nii.gz => sub-strasbourg05_space-other_T1w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-strasbourg05/anat/{sub-strasbourg05_flip-1_mt-on_MTS_softseg.json => sub-strasbourg05_space-other_T2star_softseg.json} (100%) rename derivatives/labels_softseg/sub-strasbourg05/anat/{sub-strasbourg05_T2star_softseg.nii.gz => sub-strasbourg05_space-other_T2star_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-strasbourg05/anat/{sub-strasbourg05_flip-2_mt-off_MTS_softseg.json => sub-strasbourg05_space-other_T2w_softseg.json} (100%) rename derivatives/labels_softseg/sub-strasbourg05/anat/{sub-strasbourg05_T2w_softseg.nii.gz => sub-strasbourg05_space-other_T2w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-strasbourg06/anat/{sub-strasbourg06_T1w_softseg.json => sub-strasbourg06_flip-1_mt-on_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-strasbourg06/anat/{sub-strasbourg06_flip-1_mt-on_MTS_softseg.nii.gz => sub-strasbourg06_flip-1_mt-on_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-strasbourg06/anat/{sub-strasbourg06_flip-1_mt-on_MTS_softseg.json => sub-strasbourg06_flip-2_mt-off_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-strasbourg06/anat/{sub-strasbourg06_flip-2_mt-off_MTS_softseg.nii.gz => sub-strasbourg06_flip-2_mt-off_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-strasbourg06/anat/{sub-strasbourg06_flip-2_mt-off_MTS_softseg.json => sub-strasbourg06_space-other_T1w_softseg.json} (100%) rename derivatives/labels_softseg/sub-strasbourg06/anat/{sub-strasbourg06_T1w_softseg.nii.gz => sub-strasbourg06_space-other_T1w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-strasbourg06/anat/{sub-strasbourg06_T2star_softseg.json => sub-strasbourg06_space-other_T2star_softseg.json} (100%) rename derivatives/labels_softseg/sub-strasbourg06/anat/{sub-strasbourg06_T2star_softseg.nii.gz => sub-strasbourg06_space-other_T2star_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-strasbourg06/anat/{sub-strasbourg06_T2w_softseg.json => sub-strasbourg06_space-other_T2w_softseg.json} (100%) rename derivatives/labels_softseg/sub-strasbourg06/anat/{sub-strasbourg06_T2w_softseg.nii.gz => sub-strasbourg06_space-other_T2w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tehranS01/anat/{sub-tehranS01_T1w_softseg.json => sub-tehranS01_flip-1_mt-on_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-tehranS01/anat/{sub-tehranS01_flip-1_mt-on_MTS_softseg.nii.gz => sub-tehranS01_flip-1_mt-on_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tehranS01/anat/{sub-tehranS01_T2star_softseg.json => sub-tehranS01_flip-2_mt-off_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-tehranS01/anat/{sub-tehranS01_flip-2_mt-off_MTS_softseg.nii.gz => sub-tehranS01_flip-2_mt-off_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tehranS01/anat/{sub-tehranS01_T2w_softseg.json => sub-tehranS01_space-other_T1w_softseg.json} (100%) rename derivatives/labels_softseg/sub-tehranS01/anat/{sub-tehranS01_T1w_softseg.nii.gz => sub-tehranS01_space-other_T1w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tehranS01/anat/{sub-tehranS01_flip-1_mt-on_MTS_softseg.json => sub-tehranS01_space-other_T2star_softseg.json} (100%) rename derivatives/labels_softseg/sub-tehranS01/anat/{sub-tehranS01_T2star_softseg.nii.gz => sub-tehranS01_space-other_T2star_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tehranS01/anat/{sub-tehranS01_flip-2_mt-off_MTS_softseg.json => sub-tehranS01_space-other_T2w_softseg.json} (100%) rename derivatives/labels_softseg/sub-tehranS01/anat/{sub-tehranS01_T2w_softseg.nii.gz => sub-tehranS01_space-other_T2w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tehranS02/anat/{sub-tehranS02_T1w_softseg.json => sub-tehranS02_flip-1_mt-on_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-tehranS02/anat/{sub-tehranS02_flip-1_mt-on_MTS_softseg.nii.gz => sub-tehranS02_flip-1_mt-on_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tehranS02/anat/{sub-tehranS02_T2star_softseg.json => sub-tehranS02_flip-2_mt-off_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-tehranS02/anat/{sub-tehranS02_flip-2_mt-off_MTS_softseg.nii.gz => sub-tehranS02_flip-2_mt-off_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tehranS02/anat/{sub-tehranS02_T2w_softseg.json => sub-tehranS02_space-other_T1w_softseg.json} (100%) rename derivatives/labels_softseg/sub-tehranS02/anat/{sub-tehranS02_T1w_softseg.nii.gz => sub-tehranS02_space-other_T1w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tehranS02/anat/{sub-tehranS02_flip-1_mt-on_MTS_softseg.json => sub-tehranS02_space-other_T2star_softseg.json} (100%) rename derivatives/labels_softseg/sub-tehranS02/anat/{sub-tehranS02_T2star_softseg.nii.gz => sub-tehranS02_space-other_T2star_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tehranS02/anat/{sub-tehranS02_flip-2_mt-off_MTS_softseg.json => sub-tehranS02_space-other_T2w_softseg.json} (100%) rename derivatives/labels_softseg/sub-tehranS02/anat/{sub-tehranS02_T2w_softseg.nii.gz => sub-tehranS02_space-other_T2w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tehranS03/anat/{sub-tehranS03_T1w_softseg.json => sub-tehranS03_flip-1_mt-on_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-tehranS03/anat/{sub-tehranS03_flip-1_mt-on_MTS_softseg.nii.gz => sub-tehranS03_flip-1_mt-on_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tehranS03/anat/{sub-tehranS03_T2star_softseg.json => sub-tehranS03_flip-2_mt-off_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-tehranS03/anat/{sub-tehranS03_flip-2_mt-off_MTS_softseg.nii.gz => sub-tehranS03_flip-2_mt-off_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tehranS03/anat/{sub-tehranS03_T2w_softseg.json => sub-tehranS03_space-other_T1w_softseg.json} (100%) rename derivatives/labels_softseg/sub-tehranS03/anat/{sub-tehranS03_T1w_softseg.nii.gz => sub-tehranS03_space-other_T1w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tehranS03/anat/{sub-tehranS03_flip-1_mt-on_MTS_softseg.json => sub-tehranS03_space-other_T2star_softseg.json} (100%) rename derivatives/labels_softseg/sub-tehranS03/anat/{sub-tehranS03_T2star_softseg.nii.gz => sub-tehranS03_space-other_T2star_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tehranS03/anat/{sub-tehranS03_flip-2_mt-off_MTS_softseg.json => sub-tehranS03_space-other_T2w_softseg.json} (100%) rename derivatives/labels_softseg/sub-tehranS03/anat/{sub-tehranS03_T2w_softseg.nii.gz => sub-tehranS03_space-other_T2w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tehranS04/anat/{sub-tehranS04_T1w_softseg.json => sub-tehranS04_flip-1_mt-on_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-tehranS04/anat/{sub-tehranS04_flip-1_mt-on_MTS_softseg.nii.gz => sub-tehranS04_flip-1_mt-on_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tehranS04/anat/{sub-tehranS04_T2star_softseg.json => sub-tehranS04_flip-2_mt-off_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-tehranS04/anat/{sub-tehranS04_flip-2_mt-off_MTS_softseg.nii.gz => sub-tehranS04_flip-2_mt-off_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tehranS04/anat/{sub-tehranS04_T2w_softseg.json => sub-tehranS04_space-other_T1w_softseg.json} (100%) rename derivatives/labels_softseg/sub-tehranS04/anat/{sub-tehranS04_T1w_softseg.nii.gz => sub-tehranS04_space-other_T1w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tehranS04/anat/{sub-tehranS04_flip-1_mt-on_MTS_softseg.json => sub-tehranS04_space-other_T2star_softseg.json} (100%) rename derivatives/labels_softseg/sub-tehranS04/anat/{sub-tehranS04_T2star_softseg.nii.gz => sub-tehranS04_space-other_T2star_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tehranS04/anat/{sub-tehranS04_flip-2_mt-off_MTS_softseg.json => sub-tehranS04_space-other_T2w_softseg.json} (100%) rename derivatives/labels_softseg/sub-tehranS04/anat/{sub-tehranS04_T2w_softseg.nii.gz => sub-tehranS04_space-other_T2w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tehranS05/anat/{sub-tehranS05_T1w_softseg.json => sub-tehranS05_flip-1_mt-on_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-tehranS05/anat/{sub-tehranS05_flip-1_mt-on_MTS_softseg.nii.gz => sub-tehranS05_flip-1_mt-on_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tehranS05/anat/{sub-tehranS05_T2star_softseg.json => sub-tehranS05_flip-2_mt-off_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-tehranS05/anat/{sub-tehranS05_flip-2_mt-off_MTS_softseg.nii.gz => sub-tehranS05_flip-2_mt-off_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tehranS05/anat/{sub-tehranS05_T2w_softseg.json => sub-tehranS05_space-other_T1w_softseg.json} (100%) rename derivatives/labels_softseg/sub-tehranS05/anat/{sub-tehranS05_T1w_softseg.nii.gz => sub-tehranS05_space-other_T1w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tehranS05/anat/{sub-tehranS05_flip-1_mt-on_MTS_softseg.json => sub-tehranS05_space-other_T2star_softseg.json} (100%) rename derivatives/labels_softseg/sub-tehranS05/anat/{sub-tehranS05_T2star_softseg.nii.gz => sub-tehranS05_space-other_T2star_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tehranS05/anat/{sub-tehranS05_flip-2_mt-off_MTS_softseg.json => sub-tehranS05_space-other_T2w_softseg.json} (100%) rename derivatives/labels_softseg/sub-tehranS05/anat/{sub-tehranS05_T2w_softseg.nii.gz => sub-tehranS05_space-other_T2w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tehranS06/anat/{sub-tehranS06_T1w_softseg.json => sub-tehranS06_flip-1_mt-on_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-tehranS06/anat/{sub-tehranS06_flip-1_mt-on_MTS_softseg.nii.gz => sub-tehranS06_flip-1_mt-on_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tehranS06/anat/{sub-tehranS06_T2star_softseg.json => sub-tehranS06_flip-2_mt-off_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-tehranS06/anat/{sub-tehranS06_flip-2_mt-off_MTS_softseg.nii.gz => sub-tehranS06_flip-2_mt-off_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tehranS06/anat/{sub-tehranS06_T2w_softseg.json => sub-tehranS06_space-other_T1w_softseg.json} (100%) rename derivatives/labels_softseg/sub-tehranS06/anat/{sub-tehranS06_T1w_softseg.nii.gz => sub-tehranS06_space-other_T1w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tehranS06/anat/{sub-tehranS06_flip-1_mt-on_MTS_softseg.json => sub-tehranS06_space-other_T2star_softseg.json} (100%) rename derivatives/labels_softseg/sub-tehranS06/anat/{sub-tehranS06_T2star_softseg.nii.gz => sub-tehranS06_space-other_T2star_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tehranS06/anat/{sub-tehranS06_flip-2_mt-off_MTS_softseg.json => sub-tehranS06_space-other_T2w_softseg.json} (100%) rename derivatives/labels_softseg/sub-tehranS06/anat/{sub-tehranS06_T2w_softseg.nii.gz => sub-tehranS06_space-other_T2w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tokyo750w01/anat/{sub-tokyo750w01_T1w_softseg.json => sub-tokyo750w01_flip-1_mt-on_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-tokyo750w01/anat/{sub-tokyo750w01_flip-1_mt-on_MTS_softseg.nii.gz => sub-tokyo750w01_flip-1_mt-on_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tokyo750w01/anat/{sub-tokyo750w01_T2star_softseg.json => sub-tokyo750w01_flip-2_mt-off_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-tokyo750w01/anat/{sub-tokyo750w01_flip-2_mt-off_MTS_softseg.nii.gz => sub-tokyo750w01_flip-2_mt-off_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tokyo750w01/anat/{sub-tokyo750w01_T2w_softseg.json => sub-tokyo750w01_space-other_T1w_softseg.json} (100%) rename derivatives/labels_softseg/sub-tokyo750w01/anat/{sub-tokyo750w01_T1w_softseg.nii.gz => sub-tokyo750w01_space-other_T1w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tokyo750w01/anat/{sub-tokyo750w01_flip-1_mt-on_MTS_softseg.json => sub-tokyo750w01_space-other_T2star_softseg.json} (100%) rename derivatives/labels_softseg/sub-tokyo750w01/anat/{sub-tokyo750w01_T2star_softseg.nii.gz => sub-tokyo750w01_space-other_T2star_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tokyo750w01/anat/{sub-tokyo750w01_flip-2_mt-off_MTS_softseg.json => sub-tokyo750w01_space-other_T2w_softseg.json} (100%) rename derivatives/labels_softseg/sub-tokyo750w01/anat/{sub-tokyo750w01_T2w_softseg.nii.gz => sub-tokyo750w01_space-other_T2w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tokyo750w02/anat/{sub-tokyo750w02_T1w_softseg.json => sub-tokyo750w02_flip-1_mt-on_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-tokyo750w02/anat/{sub-tokyo750w02_flip-1_mt-on_MTS_softseg.nii.gz => sub-tokyo750w02_flip-1_mt-on_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tokyo750w02/anat/{sub-tokyo750w02_T2star_softseg.json => sub-tokyo750w02_flip-2_mt-off_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-tokyo750w02/anat/{sub-tokyo750w02_flip-2_mt-off_MTS_softseg.nii.gz => sub-tokyo750w02_flip-2_mt-off_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tokyo750w02/anat/{sub-tokyo750w02_T2w_softseg.json => sub-tokyo750w02_space-other_T1w_softseg.json} (100%) rename derivatives/labels_softseg/sub-tokyo750w02/anat/{sub-tokyo750w02_T1w_softseg.nii.gz => sub-tokyo750w02_space-other_T1w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tokyo750w02/anat/{sub-tokyo750w02_flip-1_mt-on_MTS_softseg.json => sub-tokyo750w02_space-other_T2star_softseg.json} (100%) rename derivatives/labels_softseg/sub-tokyo750w02/anat/{sub-tokyo750w02_T2star_softseg.nii.gz => sub-tokyo750w02_space-other_T2star_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tokyo750w02/anat/{sub-tokyo750w02_flip-2_mt-off_MTS_softseg.json => sub-tokyo750w02_space-other_T2w_softseg.json} (100%) rename derivatives/labels_softseg/sub-tokyo750w02/anat/{sub-tokyo750w02_T2w_softseg.nii.gz => sub-tokyo750w02_space-other_T2w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tokyo750w03/anat/{sub-tokyo750w03_T1w_softseg.json => sub-tokyo750w03_flip-1_mt-on_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-tokyo750w03/anat/{sub-tokyo750w03_flip-1_mt-on_MTS_softseg.nii.gz => sub-tokyo750w03_flip-1_mt-on_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tokyo750w03/anat/{sub-tokyo750w03_T2star_softseg.json => sub-tokyo750w03_flip-2_mt-off_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-tokyo750w03/anat/{sub-tokyo750w03_flip-2_mt-off_MTS_softseg.nii.gz => sub-tokyo750w03_flip-2_mt-off_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tokyo750w03/anat/{sub-tokyo750w03_T2w_softseg.json => sub-tokyo750w03_space-other_T1w_softseg.json} (100%) rename derivatives/labels_softseg/sub-tokyo750w03/anat/{sub-tokyo750w03_T1w_softseg.nii.gz => sub-tokyo750w03_space-other_T1w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tokyo750w03/anat/{sub-tokyo750w03_flip-1_mt-on_MTS_softseg.json => sub-tokyo750w03_space-other_T2star_softseg.json} (100%) rename derivatives/labels_softseg/sub-tokyo750w03/anat/{sub-tokyo750w03_T2star_softseg.nii.gz => sub-tokyo750w03_space-other_T2star_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tokyo750w03/anat/{sub-tokyo750w03_flip-2_mt-off_MTS_softseg.json => sub-tokyo750w03_space-other_T2w_softseg.json} (100%) rename derivatives/labels_softseg/sub-tokyo750w03/anat/{sub-tokyo750w03_T2w_softseg.nii.gz => sub-tokyo750w03_space-other_T2w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tokyo750w04/anat/{sub-tokyo750w04_T1w_softseg.json => sub-tokyo750w04_flip-1_mt-on_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-tokyo750w04/anat/{sub-tokyo750w04_flip-1_mt-on_MTS_softseg.nii.gz => sub-tokyo750w04_flip-1_mt-on_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tokyo750w04/anat/{sub-tokyo750w04_T2star_softseg.json => sub-tokyo750w04_flip-2_mt-off_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-tokyo750w04/anat/{sub-tokyo750w04_flip-2_mt-off_MTS_softseg.nii.gz => sub-tokyo750w04_flip-2_mt-off_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tokyo750w04/anat/{sub-tokyo750w04_T2w_softseg.json => sub-tokyo750w04_space-other_T1w_softseg.json} (100%) rename derivatives/labels_softseg/sub-tokyo750w04/anat/{sub-tokyo750w04_T1w_softseg.nii.gz => sub-tokyo750w04_space-other_T1w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tokyo750w04/anat/{sub-tokyo750w04_flip-1_mt-on_MTS_softseg.json => sub-tokyo750w04_space-other_T2star_softseg.json} (100%) rename derivatives/labels_softseg/sub-tokyo750w04/anat/{sub-tokyo750w04_T2star_softseg.nii.gz => sub-tokyo750w04_space-other_T2star_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tokyo750w04/anat/{sub-tokyo750w04_flip-2_mt-off_MTS_softseg.json => sub-tokyo750w04_space-other_T2w_softseg.json} (100%) rename derivatives/labels_softseg/sub-tokyo750w04/anat/{sub-tokyo750w04_T2w_softseg.nii.gz => sub-tokyo750w04_space-other_T2w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tokyo750w05/anat/{sub-tokyo750w05_T1w_softseg.json => sub-tokyo750w05_flip-1_mt-on_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-tokyo750w05/anat/{sub-tokyo750w05_flip-1_mt-on_MTS_softseg.nii.gz => sub-tokyo750w05_flip-1_mt-on_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tokyo750w05/anat/{sub-tokyo750w05_T2star_softseg.json => sub-tokyo750w05_flip-2_mt-off_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-tokyo750w05/anat/{sub-tokyo750w05_flip-2_mt-off_MTS_softseg.nii.gz => sub-tokyo750w05_flip-2_mt-off_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tokyo750w05/anat/{sub-tokyo750w05_T2w_softseg.json => sub-tokyo750w05_space-other_T1w_softseg.json} (100%) rename derivatives/labels_softseg/sub-tokyo750w05/anat/{sub-tokyo750w05_T1w_softseg.nii.gz => sub-tokyo750w05_space-other_T1w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tokyo750w05/anat/{sub-tokyo750w05_flip-1_mt-on_MTS_softseg.json => sub-tokyo750w05_space-other_T2star_softseg.json} (100%) rename derivatives/labels_softseg/sub-tokyo750w05/anat/{sub-tokyo750w05_T2star_softseg.nii.gz => sub-tokyo750w05_space-other_T2star_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tokyo750w05/anat/{sub-tokyo750w05_flip-2_mt-off_MTS_softseg.json => sub-tokyo750w05_space-other_T2w_softseg.json} (100%) rename derivatives/labels_softseg/sub-tokyo750w05/anat/{sub-tokyo750w05_T2w_softseg.nii.gz => sub-tokyo750w05_space-other_T2w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tokyo750w06/anat/{sub-tokyo750w06_T1w_softseg.json => sub-tokyo750w06_flip-1_mt-on_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-tokyo750w06/anat/{sub-tokyo750w06_flip-1_mt-on_MTS_softseg.nii.gz => sub-tokyo750w06_flip-1_mt-on_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tokyo750w06/anat/{sub-tokyo750w06_T2star_softseg.json => sub-tokyo750w06_flip-2_mt-off_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-tokyo750w06/anat/{sub-tokyo750w06_flip-2_mt-off_MTS_softseg.nii.gz => sub-tokyo750w06_flip-2_mt-off_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tokyo750w06/anat/{sub-tokyo750w06_T2w_softseg.json => sub-tokyo750w06_space-other_T1w_softseg.json} (100%) rename derivatives/labels_softseg/sub-tokyo750w06/anat/{sub-tokyo750w06_T1w_softseg.nii.gz => sub-tokyo750w06_space-other_T1w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tokyo750w06/anat/{sub-tokyo750w06_flip-1_mt-on_MTS_softseg.json => sub-tokyo750w06_space-other_T2star_softseg.json} (100%) rename derivatives/labels_softseg/sub-tokyo750w06/anat/{sub-tokyo750w06_T2star_softseg.nii.gz => sub-tokyo750w06_space-other_T2star_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tokyo750w06/anat/{sub-tokyo750w06_flip-2_mt-off_MTS_softseg.json => sub-tokyo750w06_space-other_T2w_softseg.json} (100%) rename derivatives/labels_softseg/sub-tokyo750w06/anat/{sub-tokyo750w06_T2w_softseg.nii.gz => sub-tokyo750w06_space-other_T2w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tokyo750w07/anat/{sub-tokyo750w07_T1w_softseg.json => sub-tokyo750w07_flip-1_mt-on_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-tokyo750w07/anat/{sub-tokyo750w07_flip-1_mt-on_MTS_softseg.nii.gz => sub-tokyo750w07_flip-1_mt-on_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tokyo750w07/anat/{sub-tokyo750w07_T2star_softseg.json => sub-tokyo750w07_flip-2_mt-off_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-tokyo750w07/anat/{sub-tokyo750w07_flip-2_mt-off_MTS_softseg.nii.gz => sub-tokyo750w07_flip-2_mt-off_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tokyo750w07/anat/{sub-tokyo750w07_T2w_softseg.json => sub-tokyo750w07_space-other_T1w_softseg.json} (100%) rename derivatives/labels_softseg/sub-tokyo750w07/anat/{sub-tokyo750w07_T1w_softseg.nii.gz => sub-tokyo750w07_space-other_T1w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tokyo750w07/anat/{sub-tokyo750w07_flip-1_mt-on_MTS_softseg.json => sub-tokyo750w07_space-other_T2star_softseg.json} (100%) rename derivatives/labels_softseg/sub-tokyo750w07/anat/{sub-tokyo750w07_T2star_softseg.nii.gz => sub-tokyo750w07_space-other_T2star_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tokyo750w07/anat/{sub-tokyo750w07_flip-2_mt-off_MTS_softseg.json => sub-tokyo750w07_space-other_T2w_softseg.json} (100%) rename derivatives/labels_softseg/sub-tokyo750w07/anat/{sub-tokyo750w07_T2w_softseg.nii.gz => sub-tokyo750w07_space-other_T2w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tokyoIngenia01/anat/{sub-tokyoIngenia01_T1w_softseg.json => sub-tokyoIngenia01_flip-1_mt-on_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-tokyoIngenia01/anat/{sub-tokyoIngenia01_flip-1_mt-on_MTS_softseg.nii.gz => sub-tokyoIngenia01_flip-1_mt-on_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tokyoIngenia01/anat/{sub-tokyoIngenia01_T2star_softseg.json => sub-tokyoIngenia01_flip-2_mt-off_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-tokyoIngenia01/anat/{sub-tokyoIngenia01_flip-2_mt-off_MTS_softseg.nii.gz => sub-tokyoIngenia01_flip-2_mt-off_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tokyoIngenia01/anat/{sub-tokyoIngenia01_T2w_softseg.json => sub-tokyoIngenia01_space-other_T1w_softseg.json} (100%) rename derivatives/labels_softseg/sub-tokyoIngenia01/anat/{sub-tokyoIngenia01_T1w_softseg.nii.gz => sub-tokyoIngenia01_space-other_T1w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tokyoIngenia01/anat/{sub-tokyoIngenia01_flip-1_mt-on_MTS_softseg.json => sub-tokyoIngenia01_space-other_T2star_softseg.json} (100%) rename derivatives/labels_softseg/sub-tokyoIngenia01/anat/{sub-tokyoIngenia01_T2star_softseg.nii.gz => sub-tokyoIngenia01_space-other_T2star_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tokyoIngenia01/anat/{sub-tokyoIngenia01_flip-2_mt-off_MTS_softseg.json => sub-tokyoIngenia01_space-other_T2w_softseg.json} (100%) rename derivatives/labels_softseg/sub-tokyoIngenia01/anat/{sub-tokyoIngenia01_T2w_softseg.nii.gz => sub-tokyoIngenia01_space-other_T2w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tokyoIngenia02/anat/{sub-tokyoIngenia02_T1w_softseg.json => sub-tokyoIngenia02_flip-1_mt-on_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-tokyoIngenia02/anat/{sub-tokyoIngenia02_flip-1_mt-on_MTS_softseg.nii.gz => sub-tokyoIngenia02_flip-1_mt-on_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tokyoIngenia02/anat/{sub-tokyoIngenia02_T2star_softseg.json => sub-tokyoIngenia02_flip-2_mt-off_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-tokyoIngenia02/anat/{sub-tokyoIngenia02_flip-2_mt-off_MTS_softseg.nii.gz => sub-tokyoIngenia02_flip-2_mt-off_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tokyoIngenia02/anat/{sub-tokyoIngenia02_T2w_softseg.json => sub-tokyoIngenia02_space-other_T1w_softseg.json} (100%) rename derivatives/labels_softseg/sub-tokyoIngenia02/anat/{sub-tokyoIngenia02_T1w_softseg.nii.gz => sub-tokyoIngenia02_space-other_T1w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tokyoIngenia02/anat/{sub-tokyoIngenia02_flip-1_mt-on_MTS_softseg.json => sub-tokyoIngenia02_space-other_T2star_softseg.json} (100%) rename derivatives/labels_softseg/sub-tokyoIngenia02/anat/{sub-tokyoIngenia02_T2star_softseg.nii.gz => sub-tokyoIngenia02_space-other_T2star_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tokyoIngenia02/anat/{sub-tokyoIngenia02_flip-2_mt-off_MTS_softseg.json => sub-tokyoIngenia02_space-other_T2w_softseg.json} (100%) rename derivatives/labels_softseg/sub-tokyoIngenia02/anat/{sub-tokyoIngenia02_T2w_softseg.nii.gz => sub-tokyoIngenia02_space-other_T2w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tokyoIngenia03/anat/{sub-tokyoIngenia03_T1w_softseg.json => sub-tokyoIngenia03_flip-1_mt-on_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-tokyoIngenia03/anat/{sub-tokyoIngenia03_flip-1_mt-on_MTS_softseg.nii.gz => sub-tokyoIngenia03_flip-1_mt-on_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tokyoIngenia03/anat/{sub-tokyoIngenia03_T2star_softseg.json => sub-tokyoIngenia03_flip-2_mt-off_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-tokyoIngenia03/anat/{sub-tokyoIngenia03_flip-2_mt-off_MTS_softseg.nii.gz => sub-tokyoIngenia03_flip-2_mt-off_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tokyoIngenia03/anat/{sub-tokyoIngenia03_flip-1_mt-on_MTS_softseg.json => sub-tokyoIngenia03_space-other_T1w_softseg.json} (100%) rename derivatives/labels_softseg/sub-tokyoIngenia03/anat/{sub-tokyoIngenia03_T1w_softseg.nii.gz => sub-tokyoIngenia03_space-other_T1w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tokyoIngenia03/anat/{sub-tokyoIngenia03_flip-2_mt-off_MTS_softseg.json => sub-tokyoIngenia03_space-other_T2star_softseg.json} (100%) rename derivatives/labels_softseg/sub-tokyoIngenia03/anat/{sub-tokyoIngenia03_T2star_softseg.nii.gz => sub-tokyoIngenia03_space-other_T2star_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tokyoIngenia03/anat/{sub-tokyoIngenia03_T2w_softseg.json => sub-tokyoIngenia03_space-other_T2w_softseg.json} (100%) rename derivatives/labels_softseg/sub-tokyoIngenia03/anat/{sub-tokyoIngenia03_T2w_softseg.nii.gz => sub-tokyoIngenia03_space-other_T2w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tokyoIngenia04/anat/{sub-tokyoIngenia04_T1w_softseg.json => sub-tokyoIngenia04_flip-1_mt-on_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-tokyoIngenia04/anat/{sub-tokyoIngenia04_flip-1_mt-on_MTS_softseg.nii.gz => sub-tokyoIngenia04_flip-1_mt-on_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tokyoIngenia04/anat/{sub-tokyoIngenia04_T2star_softseg.json => sub-tokyoIngenia04_flip-2_mt-off_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-tokyoIngenia04/anat/{sub-tokyoIngenia04_flip-2_mt-off_MTS_softseg.nii.gz => sub-tokyoIngenia04_flip-2_mt-off_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tokyoIngenia04/anat/{sub-tokyoIngenia04_T2w_softseg.json => sub-tokyoIngenia04_space-other_T1w_softseg.json} (100%) rename derivatives/labels_softseg/sub-tokyoIngenia04/anat/{sub-tokyoIngenia04_T1w_softseg.nii.gz => sub-tokyoIngenia04_space-other_T1w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tokyoIngenia04/anat/{sub-tokyoIngenia04_flip-1_mt-on_MTS_softseg.json => sub-tokyoIngenia04_space-other_T2star_softseg.json} (100%) rename derivatives/labels_softseg/sub-tokyoIngenia04/anat/{sub-tokyoIngenia04_T2star_softseg.nii.gz => sub-tokyoIngenia04_space-other_T2star_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tokyoIngenia04/anat/{sub-tokyoIngenia04_flip-2_mt-off_MTS_softseg.json => sub-tokyoIngenia04_space-other_T2w_softseg.json} (100%) rename derivatives/labels_softseg/sub-tokyoIngenia04/anat/{sub-tokyoIngenia04_T2w_softseg.nii.gz => sub-tokyoIngenia04_space-other_T2w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tokyoIngenia05/anat/{sub-tokyoIngenia05_T1w_softseg.json => sub-tokyoIngenia05_flip-1_mt-on_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-tokyoIngenia05/anat/{sub-tokyoIngenia05_flip-1_mt-on_MTS_softseg.nii.gz => sub-tokyoIngenia05_flip-1_mt-on_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tokyoIngenia05/anat/{sub-tokyoIngenia05_T2star_softseg.json => sub-tokyoIngenia05_flip-2_mt-off_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-tokyoIngenia05/anat/{sub-tokyoIngenia05_flip-2_mt-off_MTS_softseg.nii.gz => sub-tokyoIngenia05_flip-2_mt-off_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tokyoIngenia05/anat/{sub-tokyoIngenia05_T2w_softseg.json => sub-tokyoIngenia05_space-other_T1w_softseg.json} (100%) rename derivatives/labels_softseg/sub-tokyoIngenia05/anat/{sub-tokyoIngenia05_T1w_softseg.nii.gz => sub-tokyoIngenia05_space-other_T1w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tokyoIngenia05/anat/{sub-tokyoIngenia05_flip-1_mt-on_MTS_softseg.json => sub-tokyoIngenia05_space-other_T2star_softseg.json} (100%) rename derivatives/labels_softseg/sub-tokyoIngenia05/anat/{sub-tokyoIngenia05_T2star_softseg.nii.gz => sub-tokyoIngenia05_space-other_T2star_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tokyoIngenia05/anat/{sub-tokyoIngenia05_flip-2_mt-off_MTS_softseg.json => sub-tokyoIngenia05_space-other_T2w_softseg.json} (100%) rename derivatives/labels_softseg/sub-tokyoIngenia05/anat/{sub-tokyoIngenia05_T2w_softseg.nii.gz => sub-tokyoIngenia05_space-other_T2w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tokyoIngenia06/anat/{sub-tokyoIngenia06_T1w_softseg.json => sub-tokyoIngenia06_flip-1_mt-on_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-tokyoIngenia06/anat/{sub-tokyoIngenia06_flip-1_mt-on_MTS_softseg.nii.gz => sub-tokyoIngenia06_flip-1_mt-on_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tokyoIngenia06/anat/{sub-tokyoIngenia06_T2star_softseg.json => sub-tokyoIngenia06_flip-2_mt-off_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-tokyoIngenia06/anat/{sub-tokyoIngenia06_flip-2_mt-off_MTS_softseg.nii.gz => sub-tokyoIngenia06_flip-2_mt-off_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tokyoIngenia06/anat/{sub-tokyoIngenia06_T2w_softseg.json => sub-tokyoIngenia06_space-other_T1w_softseg.json} (100%) rename derivatives/labels_softseg/sub-tokyoIngenia06/anat/{sub-tokyoIngenia06_T1w_softseg.nii.gz => sub-tokyoIngenia06_space-other_T1w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tokyoIngenia06/anat/{sub-tokyoIngenia06_flip-1_mt-on_MTS_softseg.json => sub-tokyoIngenia06_space-other_T2star_softseg.json} (100%) rename derivatives/labels_softseg/sub-tokyoIngenia06/anat/{sub-tokyoIngenia06_T2star_softseg.nii.gz => sub-tokyoIngenia06_space-other_T2star_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tokyoIngenia06/anat/{sub-tokyoIngenia06_flip-2_mt-off_MTS_softseg.json => sub-tokyoIngenia06_space-other_T2w_softseg.json} (100%) rename derivatives/labels_softseg/sub-tokyoIngenia06/anat/{sub-tokyoIngenia06_T2w_softseg.nii.gz => sub-tokyoIngenia06_space-other_T2w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tokyoIngenia07/anat/{sub-tokyoIngenia07_T1w_softseg.json => sub-tokyoIngenia07_flip-1_mt-on_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-tokyoIngenia07/anat/{sub-tokyoIngenia07_flip-1_mt-on_MTS_softseg.nii.gz => sub-tokyoIngenia07_flip-1_mt-on_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tokyoIngenia07/anat/{sub-tokyoIngenia07_T2star_softseg.json => sub-tokyoIngenia07_flip-2_mt-off_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-tokyoIngenia07/anat/{sub-tokyoIngenia07_flip-2_mt-off_MTS_softseg.nii.gz => sub-tokyoIngenia07_flip-2_mt-off_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tokyoIngenia07/anat/{sub-tokyoIngenia07_T2w_softseg.json => sub-tokyoIngenia07_space-other_T1w_softseg.json} (100%) rename derivatives/labels_softseg/sub-tokyoIngenia07/anat/{sub-tokyoIngenia07_T1w_softseg.nii.gz => sub-tokyoIngenia07_space-other_T1w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tokyoIngenia07/anat/{sub-tokyoIngenia07_flip-1_mt-on_MTS_softseg.json => sub-tokyoIngenia07_space-other_T2star_softseg.json} (100%) rename derivatives/labels_softseg/sub-tokyoIngenia07/anat/{sub-tokyoIngenia07_T2star_softseg.nii.gz => sub-tokyoIngenia07_space-other_T2star_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tokyoIngenia07/anat/{sub-tokyoIngenia07_flip-2_mt-off_MTS_softseg.json => sub-tokyoIngenia07_space-other_T2w_softseg.json} (100%) rename derivatives/labels_softseg/sub-tokyoIngenia07/anat/{sub-tokyoIngenia07_T2w_softseg.nii.gz => sub-tokyoIngenia07_space-other_T2w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tokyoSkyra01/anat/{sub-tokyoSkyra01_flip-1_mt-on_MTS_softseg.json => sub-tokyoSkyra01_flip-1_mt-on_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-tokyoSkyra01/anat/{sub-tokyoSkyra01_flip-1_mt-on_MTS_softseg.nii.gz => sub-tokyoSkyra01_flip-1_mt-on_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tokyoSkyra01/anat/{sub-tokyoSkyra01_flip-2_mt-off_MTS_softseg.json => sub-tokyoSkyra01_flip-2_mt-off_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-tokyoSkyra01/anat/{sub-tokyoSkyra01_flip-2_mt-off_MTS_softseg.nii.gz => sub-tokyoSkyra01_flip-2_mt-off_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tokyoSkyra01/anat/{sub-tokyoSkyra01_T1w_softseg.json => sub-tokyoSkyra01_space-other_T1w_softseg.json} (100%) rename derivatives/labels_softseg/sub-tokyoSkyra01/anat/{sub-tokyoSkyra01_T1w_softseg.nii.gz => sub-tokyoSkyra01_space-other_T1w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tokyoSkyra01/anat/{sub-tokyoSkyra01_T2star_softseg.json => sub-tokyoSkyra01_space-other_T2star_softseg.json} (100%) rename derivatives/labels_softseg/sub-tokyoSkyra01/anat/{sub-tokyoSkyra01_T2star_softseg.nii.gz => sub-tokyoSkyra01_space-other_T2star_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tokyoSkyra01/anat/{sub-tokyoSkyra01_T2w_softseg.json => sub-tokyoSkyra01_space-other_T2w_softseg.json} (100%) rename derivatives/labels_softseg/sub-tokyoSkyra01/anat/{sub-tokyoSkyra01_T2w_softseg.nii.gz => sub-tokyoSkyra01_space-other_T2w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tokyoSkyra02/anat/{sub-tokyoSkyra02_T1w_softseg.json => sub-tokyoSkyra02_flip-1_mt-on_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-tokyoSkyra02/anat/{sub-tokyoSkyra02_flip-1_mt-on_MTS_softseg.nii.gz => sub-tokyoSkyra02_flip-1_mt-on_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tokyoSkyra02/anat/{sub-tokyoSkyra02_T2star_softseg.json => sub-tokyoSkyra02_flip-2_mt-off_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-tokyoSkyra02/anat/{sub-tokyoSkyra02_flip-2_mt-off_MTS_softseg.nii.gz => sub-tokyoSkyra02_flip-2_mt-off_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tokyoSkyra02/anat/{sub-tokyoSkyra02_T2w_softseg.json => sub-tokyoSkyra02_space-other_T1w_softseg.json} (100%) rename derivatives/labels_softseg/sub-tokyoSkyra02/anat/{sub-tokyoSkyra02_T1w_softseg.nii.gz => sub-tokyoSkyra02_space-other_T1w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tokyoSkyra02/anat/{sub-tokyoSkyra02_flip-1_mt-on_MTS_softseg.json => sub-tokyoSkyra02_space-other_T2star_softseg.json} (100%) rename derivatives/labels_softseg/sub-tokyoSkyra02/anat/{sub-tokyoSkyra02_T2star_softseg.nii.gz => sub-tokyoSkyra02_space-other_T2star_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tokyoSkyra02/anat/{sub-tokyoSkyra02_flip-2_mt-off_MTS_softseg.json => sub-tokyoSkyra02_space-other_T2w_softseg.json} (100%) rename derivatives/labels_softseg/sub-tokyoSkyra02/anat/{sub-tokyoSkyra02_T2w_softseg.nii.gz => sub-tokyoSkyra02_space-other_T2w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tokyoSkyra03/anat/{sub-tokyoSkyra03_T1w_softseg.json => sub-tokyoSkyra03_flip-1_mt-on_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-tokyoSkyra03/anat/{sub-tokyoSkyra03_flip-1_mt-on_MTS_softseg.nii.gz => sub-tokyoSkyra03_flip-1_mt-on_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tokyoSkyra03/anat/{sub-tokyoSkyra03_T2star_softseg.json => sub-tokyoSkyra03_flip-2_mt-off_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-tokyoSkyra03/anat/{sub-tokyoSkyra03_flip-2_mt-off_MTS_softseg.nii.gz => sub-tokyoSkyra03_flip-2_mt-off_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tokyoSkyra03/anat/{sub-tokyoSkyra03_T2w_softseg.json => sub-tokyoSkyra03_space-other_T1w_softseg.json} (100%) rename derivatives/labels_softseg/sub-tokyoSkyra03/anat/{sub-tokyoSkyra03_T1w_softseg.nii.gz => sub-tokyoSkyra03_space-other_T1w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tokyoSkyra03/anat/{sub-tokyoSkyra03_flip-1_mt-on_MTS_softseg.json => sub-tokyoSkyra03_space-other_T2star_softseg.json} (100%) rename derivatives/labels_softseg/sub-tokyoSkyra03/anat/{sub-tokyoSkyra03_T2star_softseg.nii.gz => sub-tokyoSkyra03_space-other_T2star_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tokyoSkyra03/anat/{sub-tokyoSkyra03_flip-2_mt-off_MTS_softseg.json => sub-tokyoSkyra03_space-other_T2w_softseg.json} (100%) rename derivatives/labels_softseg/sub-tokyoSkyra03/anat/{sub-tokyoSkyra03_T2w_softseg.nii.gz => sub-tokyoSkyra03_space-other_T2w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tokyoSkyra04/anat/{sub-tokyoSkyra04_T1w_softseg.json => sub-tokyoSkyra04_flip-1_mt-on_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-tokyoSkyra04/anat/{sub-tokyoSkyra04_flip-1_mt-on_MTS_softseg.nii.gz => sub-tokyoSkyra04_flip-1_mt-on_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tokyoSkyra04/anat/{sub-tokyoSkyra04_T2star_softseg.json => sub-tokyoSkyra04_flip-2_mt-off_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-tokyoSkyra04/anat/{sub-tokyoSkyra04_flip-2_mt-off_MTS_softseg.nii.gz => sub-tokyoSkyra04_flip-2_mt-off_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tokyoSkyra04/anat/{sub-tokyoSkyra04_T2w_softseg.json => sub-tokyoSkyra04_space-other_T1w_softseg.json} (100%) rename derivatives/labels_softseg/sub-tokyoSkyra04/anat/{sub-tokyoSkyra04_T1w_softseg.nii.gz => sub-tokyoSkyra04_space-other_T1w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tokyoSkyra04/anat/{sub-tokyoSkyra04_flip-1_mt-on_MTS_softseg.json => sub-tokyoSkyra04_space-other_T2star_softseg.json} (100%) rename derivatives/labels_softseg/sub-tokyoSkyra04/anat/{sub-tokyoSkyra04_T2star_softseg.nii.gz => sub-tokyoSkyra04_space-other_T2star_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tokyoSkyra04/anat/{sub-tokyoSkyra04_flip-2_mt-off_MTS_softseg.json => sub-tokyoSkyra04_space-other_T2w_softseg.json} (100%) rename derivatives/labels_softseg/sub-tokyoSkyra04/anat/{sub-tokyoSkyra04_T2w_softseg.nii.gz => sub-tokyoSkyra04_space-other_T2w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tokyoSkyra05/anat/{sub-tokyoSkyra05_T1w_softseg.json => sub-tokyoSkyra05_flip-1_mt-on_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-tokyoSkyra05/anat/{sub-tokyoSkyra05_flip-1_mt-on_MTS_softseg.nii.gz => sub-tokyoSkyra05_flip-1_mt-on_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tokyoSkyra05/anat/{sub-tokyoSkyra05_T2star_softseg.json => sub-tokyoSkyra05_flip-2_mt-off_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-tokyoSkyra05/anat/{sub-tokyoSkyra05_flip-2_mt-off_MTS_softseg.nii.gz => sub-tokyoSkyra05_flip-2_mt-off_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tokyoSkyra05/anat/{sub-tokyoSkyra05_T2w_softseg.json => sub-tokyoSkyra05_space-other_T1w_softseg.json} (100%) rename derivatives/labels_softseg/sub-tokyoSkyra05/anat/{sub-tokyoSkyra05_T1w_softseg.nii.gz => sub-tokyoSkyra05_space-other_T1w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tokyoSkyra05/anat/{sub-tokyoSkyra05_flip-1_mt-on_MTS_softseg.json => sub-tokyoSkyra05_space-other_T2star_softseg.json} (100%) rename derivatives/labels_softseg/sub-tokyoSkyra05/anat/{sub-tokyoSkyra05_T2star_softseg.nii.gz => sub-tokyoSkyra05_space-other_T2star_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tokyoSkyra05/anat/{sub-tokyoSkyra05_flip-2_mt-off_MTS_softseg.json => sub-tokyoSkyra05_space-other_T2w_softseg.json} (100%) rename derivatives/labels_softseg/sub-tokyoSkyra05/anat/{sub-tokyoSkyra05_T2w_softseg.nii.gz => sub-tokyoSkyra05_space-other_T2w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tokyoSkyra06/anat/{sub-tokyoSkyra06_T1w_softseg.json => sub-tokyoSkyra06_flip-1_mt-on_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-tokyoSkyra06/anat/{sub-tokyoSkyra06_flip-1_mt-on_MTS_softseg.nii.gz => sub-tokyoSkyra06_flip-1_mt-on_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tokyoSkyra06/anat/{sub-tokyoSkyra06_T2star_softseg.json => sub-tokyoSkyra06_flip-2_mt-off_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-tokyoSkyra06/anat/{sub-tokyoSkyra06_flip-2_mt-off_MTS_softseg.nii.gz => sub-tokyoSkyra06_flip-2_mt-off_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tokyoSkyra06/anat/{sub-tokyoSkyra06_T2w_softseg.json => sub-tokyoSkyra06_space-other_T1w_softseg.json} (100%) rename derivatives/labels_softseg/sub-tokyoSkyra06/anat/{sub-tokyoSkyra06_T1w_softseg.nii.gz => sub-tokyoSkyra06_space-other_T1w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tokyoSkyra06/anat/{sub-tokyoSkyra06_flip-1_mt-on_MTS_softseg.json => sub-tokyoSkyra06_space-other_T2star_softseg.json} (100%) rename derivatives/labels_softseg/sub-tokyoSkyra06/anat/{sub-tokyoSkyra06_T2star_softseg.nii.gz => sub-tokyoSkyra06_space-other_T2star_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tokyoSkyra06/anat/{sub-tokyoSkyra06_flip-2_mt-off_MTS_softseg.json => sub-tokyoSkyra06_space-other_T2w_softseg.json} (100%) rename derivatives/labels_softseg/sub-tokyoSkyra06/anat/{sub-tokyoSkyra06_T2w_softseg.nii.gz => sub-tokyoSkyra06_space-other_T2w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tokyoSkyra07/anat/{sub-tokyoSkyra07_T1w_softseg.json => sub-tokyoSkyra07_flip-1_mt-on_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-tokyoSkyra07/anat/{sub-tokyoSkyra07_flip-1_mt-on_MTS_softseg.nii.gz => sub-tokyoSkyra07_flip-1_mt-on_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tokyoSkyra07/anat/{sub-tokyoSkyra07_T2star_softseg.json => sub-tokyoSkyra07_flip-2_mt-off_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-tokyoSkyra07/anat/{sub-tokyoSkyra07_flip-2_mt-off_MTS_softseg.nii.gz => sub-tokyoSkyra07_flip-2_mt-off_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tokyoSkyra07/anat/{sub-tokyoSkyra07_T2w_softseg.json => sub-tokyoSkyra07_space-other_T1w_softseg.json} (100%) rename derivatives/labels_softseg/sub-tokyoSkyra07/anat/{sub-tokyoSkyra07_T1w_softseg.nii.gz => sub-tokyoSkyra07_space-other_T1w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tokyoSkyra07/anat/{sub-tokyoSkyra07_flip-1_mt-on_MTS_softseg.json => sub-tokyoSkyra07_space-other_T2star_softseg.json} (100%) rename derivatives/labels_softseg/sub-tokyoSkyra07/anat/{sub-tokyoSkyra07_T2star_softseg.nii.gz => sub-tokyoSkyra07_space-other_T2star_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tokyoSkyra07/anat/{sub-tokyoSkyra07_flip-2_mt-off_MTS_softseg.json => sub-tokyoSkyra07_space-other_T2w_softseg.json} (100%) rename derivatives/labels_softseg/sub-tokyoSkyra07/anat/{sub-tokyoSkyra07_T2w_softseg.nii.gz => sub-tokyoSkyra07_space-other_T2w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-ubc01/anat/{sub-ubc01_T1w_softseg.json => sub-ubc01_flip-1_mt-on_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-ubc01/anat/{sub-ubc01_flip-1_mt-on_MTS_softseg.nii.gz => sub-ubc01_flip-1_mt-on_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-ubc01/anat/{sub-ubc01_T2star_softseg.json => sub-ubc01_space-other_T1w_softseg.json} (100%) rename derivatives/labels_softseg/sub-ubc01/anat/{sub-ubc01_T1w_softseg.nii.gz => sub-ubc01_space-other_T1w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-ubc01/anat/{sub-ubc01_T2w_softseg.json => sub-ubc01_space-other_T2star_softseg.json} (100%) rename derivatives/labels_softseg/sub-ubc01/anat/{sub-ubc01_T2star_softseg.nii.gz => sub-ubc01_space-other_T2star_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-ubc01/anat/{sub-ubc01_flip-1_mt-on_MTS_softseg.json => sub-ubc01_space-other_T2w_softseg.json} (100%) rename derivatives/labels_softseg/sub-ubc01/anat/{sub-ubc01_T2w_softseg.nii.gz => sub-ubc01_space-other_T2w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-ubc02/anat/{sub-ubc02_T1w_softseg.json => sub-ubc02_flip-1_mt-on_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-ubc02/anat/{sub-ubc02_flip-1_mt-on_MTS_softseg.nii.gz => sub-ubc02_flip-1_mt-on_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-ubc02/anat/{sub-ubc02_flip-1_mt-on_MTS_softseg.json => sub-ubc02_flip-2_mt-off_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-ubc02/anat/{sub-ubc02_flip-2_mt-off_MTS_softseg.nii.gz => sub-ubc02_flip-2_mt-off_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-ubc02/anat/{sub-ubc02_flip-2_mt-off_MTS_softseg.json => sub-ubc02_space-other_T1w_softseg.json} (100%) rename derivatives/labels_softseg/sub-ubc02/anat/{sub-ubc02_T1w_softseg.nii.gz => sub-ubc02_space-other_T1w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-ubc02/anat/{sub-ubc02_T2star_softseg.json => sub-ubc02_space-other_T2star_softseg.json} (100%) rename derivatives/labels_softseg/sub-ubc02/anat/{sub-ubc02_T2star_softseg.nii.gz => sub-ubc02_space-other_T2star_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-ubc02/anat/{sub-ubc02_T2w_softseg.json => sub-ubc02_space-other_T2w_softseg.json} (100%) rename derivatives/labels_softseg/sub-ubc02/anat/{sub-ubc02_T2w_softseg.nii.gz => sub-ubc02_space-other_T2w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-ubc03/anat/{sub-ubc03_T1w_softseg.json => sub-ubc03_flip-1_mt-on_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-ubc03/anat/{sub-ubc03_flip-1_mt-on_MTS_softseg.nii.gz => sub-ubc03_flip-1_mt-on_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-ubc03/anat/{sub-ubc03_T2star_softseg.json => sub-ubc03_flip-2_mt-off_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-ubc03/anat/{sub-ubc03_flip-2_mt-off_MTS_softseg.nii.gz => sub-ubc03_flip-2_mt-off_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-ubc03/anat/{sub-ubc03_T2w_softseg.json => sub-ubc03_space-other_T1w_softseg.json} (100%) rename derivatives/labels_softseg/sub-ubc03/anat/{sub-ubc03_T1w_softseg.nii.gz => sub-ubc03_space-other_T1w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-ubc03/anat/{sub-ubc03_flip-1_mt-on_MTS_softseg.json => sub-ubc03_space-other_T2star_softseg.json} (100%) rename derivatives/labels_softseg/sub-ubc03/anat/{sub-ubc03_T2star_softseg.nii.gz => sub-ubc03_space-other_T2star_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-ubc03/anat/{sub-ubc03_flip-2_mt-off_MTS_softseg.json => sub-ubc03_space-other_T2w_softseg.json} (100%) rename derivatives/labels_softseg/sub-ubc03/anat/{sub-ubc03_T2w_softseg.nii.gz => sub-ubc03_space-other_T2w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-ubc04/anat/{sub-ubc04_T1w_softseg.json => sub-ubc04_flip-1_mt-on_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-ubc04/anat/{sub-ubc04_flip-1_mt-on_MTS_softseg.nii.gz => sub-ubc04_flip-1_mt-on_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-ubc04/anat/{sub-ubc04_T2star_softseg.json => sub-ubc04_flip-2_mt-off_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-ubc04/anat/{sub-ubc04_flip-2_mt-off_MTS_softseg.nii.gz => sub-ubc04_flip-2_mt-off_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-ubc04/anat/{sub-ubc04_T2w_softseg.json => sub-ubc04_space-other_T1w_softseg.json} (100%) rename derivatives/labels_softseg/sub-ubc04/anat/{sub-ubc04_T1w_softseg.nii.gz => sub-ubc04_space-other_T1w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-ubc04/anat/{sub-ubc04_flip-1_mt-on_MTS_softseg.json => sub-ubc04_space-other_T2star_softseg.json} (100%) rename derivatives/labels_softseg/sub-ubc04/anat/{sub-ubc04_T2star_softseg.nii.gz => sub-ubc04_space-other_T2star_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-ubc04/anat/{sub-ubc04_flip-2_mt-off_MTS_softseg.json => sub-ubc04_space-other_T2w_softseg.json} (100%) rename derivatives/labels_softseg/sub-ubc04/anat/{sub-ubc04_T2w_softseg.nii.gz => sub-ubc04_space-other_T2w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-ubc05/anat/{sub-ubc05_T1w_softseg.json => sub-ubc05_flip-1_mt-on_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-ubc05/anat/{sub-ubc05_flip-1_mt-on_MTS_softseg.nii.gz => sub-ubc05_flip-1_mt-on_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-ubc05/anat/{sub-ubc05_T2star_softseg.json => sub-ubc05_flip-2_mt-off_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-ubc05/anat/{sub-ubc05_flip-2_mt-off_MTS_softseg.nii.gz => sub-ubc05_flip-2_mt-off_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-ubc05/anat/{sub-ubc05_T2w_softseg.json => sub-ubc05_space-other_T1w_softseg.json} (100%) rename derivatives/labels_softseg/sub-ubc05/anat/{sub-ubc05_T1w_softseg.nii.gz => sub-ubc05_space-other_T1w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-ubc05/anat/{sub-ubc05_flip-1_mt-on_MTS_softseg.json => sub-ubc05_space-other_T2star_softseg.json} (100%) rename derivatives/labels_softseg/sub-ubc05/anat/{sub-ubc05_T2star_softseg.nii.gz => sub-ubc05_space-other_T2star_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-ubc05/anat/{sub-ubc05_flip-2_mt-off_MTS_softseg.json => sub-ubc05_space-other_T2w_softseg.json} (100%) rename derivatives/labels_softseg/sub-ubc05/anat/{sub-ubc05_T2w_softseg.nii.gz => sub-ubc05_space-other_T2w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-ubc06/anat/{sub-ubc06_flip-1_mt-on_MTS_softseg.json => sub-ubc06_flip-1_mt-on_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-ubc06/anat/{sub-ubc06_flip-1_mt-on_MTS_softseg.nii.gz => sub-ubc06_flip-1_mt-on_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-ubc06/anat/{sub-ubc06_flip-2_mt-off_MTS_softseg.json => sub-ubc06_flip-2_mt-off_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-ubc06/anat/{sub-ubc06_flip-2_mt-off_MTS_softseg.nii.gz => sub-ubc06_flip-2_mt-off_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-ubc06/anat/{sub-ubc06_T1w_softseg.json => sub-ubc06_space-other_T1w_softseg.json} (100%) rename derivatives/labels_softseg/sub-ubc06/anat/{sub-ubc06_T1w_softseg.nii.gz => sub-ubc06_space-other_T1w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-ubc06/anat/{sub-ubc06_T2star_softseg.json => sub-ubc06_space-other_T2star_softseg.json} (100%) rename derivatives/labels_softseg/sub-ubc06/anat/{sub-ubc06_T2star_softseg.nii.gz => sub-ubc06_space-other_T2star_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-ubc06/anat/{sub-ubc06_T2w_softseg.json => sub-ubc06_space-other_T2w_softseg.json} (100%) rename derivatives/labels_softseg/sub-ubc06/anat/{sub-ubc06_T2w_softseg.nii.gz => sub-ubc06_space-other_T2w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-ucdavis01/anat/{sub-ucdavis01_T1w_softseg.json => sub-ucdavis01_flip-1_mt-on_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-ucdavis01/anat/{sub-ucdavis01_flip-1_mt-on_MTS_softseg.nii.gz => sub-ucdavis01_flip-1_mt-on_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-ucdavis01/anat/{sub-ucdavis01_T2star_softseg.json => sub-ucdavis01_flip-2_mt-off_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-ucdavis01/anat/{sub-ucdavis01_flip-2_mt-off_MTS_softseg.nii.gz => sub-ucdavis01_flip-2_mt-off_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-ucdavis01/anat/{sub-ucdavis01_T2w_softseg.json => sub-ucdavis01_space-other_T1w_softseg.json} (100%) rename derivatives/labels_softseg/sub-ucdavis01/anat/{sub-ucdavis01_T1w_softseg.nii.gz => sub-ucdavis01_space-other_T1w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-ucdavis01/anat/{sub-ucdavis01_flip-1_mt-on_MTS_softseg.json => sub-ucdavis01_space-other_T2star_softseg.json} (100%) rename derivatives/labels_softseg/sub-ucdavis01/anat/{sub-ucdavis01_T2star_softseg.nii.gz => sub-ucdavis01_space-other_T2star_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-ucdavis01/anat/{sub-ucdavis01_flip-2_mt-off_MTS_softseg.json => sub-ucdavis01_space-other_T2w_softseg.json} (100%) rename derivatives/labels_softseg/sub-ucdavis01/anat/{sub-ucdavis01_T2w_softseg.nii.gz => sub-ucdavis01_space-other_T2w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-ucdavis02/anat/{sub-ucdavis02_T1w_softseg.json => sub-ucdavis02_flip-1_mt-on_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-ucdavis02/anat/{sub-ucdavis02_flip-1_mt-on_MTS_softseg.nii.gz => sub-ucdavis02_flip-1_mt-on_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-ucdavis02/anat/{sub-ucdavis02_T2star_softseg.json => sub-ucdavis02_flip-2_mt-off_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-ucdavis02/anat/{sub-ucdavis02_flip-2_mt-off_MTS_softseg.nii.gz => sub-ucdavis02_flip-2_mt-off_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-ucdavis02/anat/{sub-ucdavis02_T2w_softseg.json => sub-ucdavis02_space-other_T1w_softseg.json} (100%) rename derivatives/labels_softseg/sub-ucdavis02/anat/{sub-ucdavis02_T1w_softseg.nii.gz => sub-ucdavis02_space-other_T1w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-ucdavis02/anat/{sub-ucdavis02_flip-1_mt-on_MTS_softseg.json => sub-ucdavis02_space-other_T2star_softseg.json} (100%) rename derivatives/labels_softseg/sub-ucdavis02/anat/{sub-ucdavis02_T2star_softseg.nii.gz => sub-ucdavis02_space-other_T2star_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-ucdavis02/anat/{sub-ucdavis02_flip-2_mt-off_MTS_softseg.json => sub-ucdavis02_space-other_T2w_softseg.json} (100%) rename derivatives/labels_softseg/sub-ucdavis02/anat/{sub-ucdavis02_T2w_softseg.nii.gz => sub-ucdavis02_space-other_T2w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-ucdavis03/anat/{sub-ucdavis03_T1w_softseg.json => sub-ucdavis03_flip-1_mt-on_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-ucdavis03/anat/{sub-ucdavis03_flip-1_mt-on_MTS_softseg.nii.gz => sub-ucdavis03_flip-1_mt-on_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-ucdavis03/anat/{sub-ucdavis03_T2star_softseg.json => sub-ucdavis03_space-other_T1w_softseg.json} (100%) rename derivatives/labels_softseg/sub-ucdavis03/anat/{sub-ucdavis03_T1w_softseg.nii.gz => sub-ucdavis03_space-other_T1w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-ucdavis03/anat/{sub-ucdavis03_T2w_softseg.json => sub-ucdavis03_space-other_T2star_softseg.json} (100%) rename derivatives/labels_softseg/sub-ucdavis03/anat/{sub-ucdavis03_T2star_softseg.nii.gz => sub-ucdavis03_space-other_T2star_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-ucdavis03/anat/{sub-ucdavis03_flip-1_mt-on_MTS_softseg.json => sub-ucdavis03_space-other_T2w_softseg.json} (100%) rename derivatives/labels_softseg/sub-ucdavis03/anat/{sub-ucdavis03_T2w_softseg.nii.gz => sub-ucdavis03_space-other_T2w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-ucdavis04/anat/{sub-ucdavis04_T1w_softseg.json => sub-ucdavis04_flip-1_mt-on_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-ucdavis04/anat/{sub-ucdavis04_flip-1_mt-on_MTS_softseg.nii.gz => sub-ucdavis04_flip-1_mt-on_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-ucdavis04/anat/{sub-ucdavis04_T2star_softseg.json => sub-ucdavis04_flip-2_mt-off_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-ucdavis04/anat/{sub-ucdavis04_flip-2_mt-off_MTS_softseg.nii.gz => sub-ucdavis04_flip-2_mt-off_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-ucdavis04/anat/{sub-ucdavis04_T2w_softseg.json => sub-ucdavis04_space-other_T1w_softseg.json} (100%) rename derivatives/labels_softseg/sub-ucdavis04/anat/{sub-ucdavis04_T1w_softseg.nii.gz => sub-ucdavis04_space-other_T1w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-ucdavis04/anat/{sub-ucdavis04_flip-1_mt-on_MTS_softseg.json => sub-ucdavis04_space-other_T2star_softseg.json} (100%) rename derivatives/labels_softseg/sub-ucdavis04/anat/{sub-ucdavis04_T2star_softseg.nii.gz => sub-ucdavis04_space-other_T2star_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-ucdavis04/anat/{sub-ucdavis04_flip-2_mt-off_MTS_softseg.json => sub-ucdavis04_space-other_T2w_softseg.json} (100%) rename derivatives/labels_softseg/sub-ucdavis04/anat/{sub-ucdavis04_T2w_softseg.nii.gz => sub-ucdavis04_space-other_T2w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-ucdavis05/anat/{sub-ucdavis05_T1w_softseg.json => sub-ucdavis05_flip-1_mt-on_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-ucdavis05/anat/{sub-ucdavis05_flip-1_mt-on_MTS_softseg.nii.gz => sub-ucdavis05_flip-1_mt-on_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-ucdavis05/anat/{sub-ucdavis05_T2star_softseg.json => sub-ucdavis05_space-other_T1w_softseg.json} (100%) rename derivatives/labels_softseg/sub-ucdavis05/anat/{sub-ucdavis05_T1w_softseg.nii.gz => sub-ucdavis05_space-other_T1w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-ucdavis05/anat/{sub-ucdavis05_T2w_softseg.json => sub-ucdavis05_space-other_T2star_softseg.json} (100%) rename derivatives/labels_softseg/sub-ucdavis05/anat/{sub-ucdavis05_T2star_softseg.nii.gz => sub-ucdavis05_space-other_T2star_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-ucdavis05/anat/{sub-ucdavis05_flip-1_mt-on_MTS_softseg.json => sub-ucdavis05_space-other_T2w_softseg.json} (100%) rename derivatives/labels_softseg/sub-ucdavis05/anat/{sub-ucdavis05_T2w_softseg.nii.gz => sub-ucdavis05_space-other_T2w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-ucdavis06/anat/{sub-ucdavis06_T1w_softseg.json => sub-ucdavis06_flip-1_mt-on_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-ucdavis06/anat/{sub-ucdavis06_flip-1_mt-on_MTS_softseg.nii.gz => sub-ucdavis06_flip-1_mt-on_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-ucdavis06/anat/{sub-ucdavis06_T2star_softseg.json => sub-ucdavis06_space-other_T1w_softseg.json} (100%) rename derivatives/labels_softseg/sub-ucdavis06/anat/{sub-ucdavis06_T1w_softseg.nii.gz => sub-ucdavis06_space-other_T1w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-ucdavis06/anat/{sub-ucdavis06_T2w_softseg.json => sub-ucdavis06_space-other_T2star_softseg.json} (100%) rename derivatives/labels_softseg/sub-ucdavis06/anat/{sub-ucdavis06_T2star_softseg.nii.gz => sub-ucdavis06_space-other_T2star_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-ucdavis06/anat/{sub-ucdavis06_flip-1_mt-on_MTS_softseg.json => sub-ucdavis06_space-other_T2w_softseg.json} (100%) rename derivatives/labels_softseg/sub-ucdavis06/anat/{sub-ucdavis06_T2w_softseg.nii.gz => sub-ucdavis06_space-other_T2w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-ucl01/anat/{sub-ucl01_T1w_softseg.json => sub-ucl01_flip-1_mt-on_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-ucl01/anat/{sub-ucl01_flip-1_mt-on_MTS_softseg.nii.gz => sub-ucl01_flip-1_mt-on_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-ucl01/anat/{sub-ucl01_T2star_softseg.json => sub-ucl01_flip-2_mt-off_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-ucl01/anat/{sub-ucl01_flip-2_mt-off_MTS_softseg.nii.gz => sub-ucl01_flip-2_mt-off_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-ucl01/anat/{sub-ucl01_T2w_softseg.json => sub-ucl01_space-other_T1w_softseg.json} (100%) rename derivatives/labels_softseg/sub-ucl01/anat/{sub-ucl01_T1w_softseg.nii.gz => sub-ucl01_space-other_T1w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-ucl01/anat/{sub-ucl01_flip-1_mt-on_MTS_softseg.json => sub-ucl01_space-other_T2star_softseg.json} (100%) rename derivatives/labels_softseg/sub-ucl01/anat/{sub-ucl01_T2star_softseg.nii.gz => sub-ucl01_space-other_T2star_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-ucl01/anat/{sub-ucl01_flip-2_mt-off_MTS_softseg.json => sub-ucl01_space-other_T2w_softseg.json} (100%) rename derivatives/labels_softseg/sub-ucl01/anat/{sub-ucl01_T2w_softseg.nii.gz => sub-ucl01_space-other_T2w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-ucl02/anat/{sub-ucl02_T1w_softseg.json => sub-ucl02_flip-1_mt-on_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-ucl02/anat/{sub-ucl02_flip-1_mt-on_MTS_softseg.nii.gz => sub-ucl02_flip-1_mt-on_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-ucl02/anat/{sub-ucl02_T2star_softseg.json => sub-ucl02_flip-2_mt-off_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-ucl02/anat/{sub-ucl02_flip-2_mt-off_MTS_softseg.nii.gz => sub-ucl02_flip-2_mt-off_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-ucl02/anat/{sub-ucl02_T2w_softseg.json => sub-ucl02_space-other_T1w_softseg.json} (100%) rename derivatives/labels_softseg/sub-ucl02/anat/{sub-ucl02_T1w_softseg.nii.gz => sub-ucl02_space-other_T1w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-ucl02/anat/{sub-ucl02_flip-1_mt-on_MTS_softseg.json => sub-ucl02_space-other_T2star_softseg.json} (100%) rename derivatives/labels_softseg/sub-ucl02/anat/{sub-ucl02_T2star_softseg.nii.gz => sub-ucl02_space-other_T2star_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-ucl02/anat/{sub-ucl02_flip-2_mt-off_MTS_softseg.json => sub-ucl02_space-other_T2w_softseg.json} (100%) rename derivatives/labels_softseg/sub-ucl02/anat/{sub-ucl02_T2w_softseg.nii.gz => sub-ucl02_space-other_T2w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-ucl03/anat/{sub-ucl03_T1w_softseg.json => sub-ucl03_flip-1_mt-on_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-ucl03/anat/{sub-ucl03_flip-1_mt-on_MTS_softseg.nii.gz => sub-ucl03_flip-1_mt-on_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-ucl03/anat/{sub-ucl03_T2star_softseg.json => sub-ucl03_flip-2_mt-off_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-ucl03/anat/{sub-ucl03_flip-2_mt-off_MTS_softseg.nii.gz => sub-ucl03_flip-2_mt-off_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-ucl03/anat/{sub-ucl03_T2w_softseg.json => sub-ucl03_space-other_T1w_softseg.json} (100%) rename derivatives/labels_softseg/sub-ucl03/anat/{sub-ucl03_T1w_softseg.nii.gz => sub-ucl03_space-other_T1w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-ucl03/anat/{sub-ucl03_flip-1_mt-on_MTS_softseg.json => sub-ucl03_space-other_T2star_softseg.json} (100%) rename derivatives/labels_softseg/sub-ucl03/anat/{sub-ucl03_T2star_softseg.nii.gz => sub-ucl03_space-other_T2star_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-ucl03/anat/{sub-ucl03_flip-2_mt-off_MTS_softseg.json => sub-ucl03_space-other_T2w_softseg.json} (100%) rename derivatives/labels_softseg/sub-ucl03/anat/{sub-ucl03_T2w_softseg.nii.gz => sub-ucl03_space-other_T2w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-ucl04/anat/{sub-ucl04_T1w_softseg.json => sub-ucl04_flip-1_mt-on_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-ucl04/anat/{sub-ucl04_flip-1_mt-on_MTS_softseg.nii.gz => sub-ucl04_flip-1_mt-on_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-ucl04/anat/{sub-ucl04_T2star_softseg.json => sub-ucl04_flip-2_mt-off_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-ucl04/anat/{sub-ucl04_flip-2_mt-off_MTS_softseg.nii.gz => sub-ucl04_flip-2_mt-off_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-ucl04/anat/{sub-ucl04_T2w_softseg.json => sub-ucl04_space-other_T1w_softseg.json} (100%) rename derivatives/labels_softseg/sub-ucl04/anat/{sub-ucl04_T1w_softseg.nii.gz => sub-ucl04_space-other_T1w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-ucl04/anat/{sub-ucl04_flip-1_mt-on_MTS_softseg.json => sub-ucl04_space-other_T2star_softseg.json} (100%) rename derivatives/labels_softseg/sub-ucl04/anat/{sub-ucl04_T2star_softseg.nii.gz => sub-ucl04_space-other_T2star_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-ucl04/anat/{sub-ucl04_flip-2_mt-off_MTS_softseg.json => sub-ucl04_space-other_T2w_softseg.json} (100%) rename derivatives/labels_softseg/sub-ucl04/anat/{sub-ucl04_T2w_softseg.nii.gz => sub-ucl04_space-other_T2w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-ucl05/anat/{sub-ucl05_T1w_softseg.json => sub-ucl05_flip-1_mt-on_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-ucl05/anat/{sub-ucl05_flip-1_mt-on_MTS_softseg.nii.gz => sub-ucl05_flip-1_mt-on_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-ucl05/anat/{sub-ucl05_T2star_softseg.json => sub-ucl05_flip-2_mt-off_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-ucl05/anat/{sub-ucl05_flip-2_mt-off_MTS_softseg.nii.gz => sub-ucl05_flip-2_mt-off_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-ucl05/anat/{sub-ucl05_T2w_softseg.json => sub-ucl05_space-other_T1w_softseg.json} (100%) rename derivatives/labels_softseg/sub-ucl05/anat/{sub-ucl05_T1w_softseg.nii.gz => sub-ucl05_space-other_T1w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-ucl05/anat/{sub-ucl05_flip-1_mt-on_MTS_softseg.json => sub-ucl05_space-other_T2star_softseg.json} (100%) rename derivatives/labels_softseg/sub-ucl05/anat/{sub-ucl05_T2star_softseg.nii.gz => sub-ucl05_space-other_T2star_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-ucl05/anat/{sub-ucl05_flip-2_mt-off_MTS_softseg.json => sub-ucl05_space-other_T2w_softseg.json} (100%) rename derivatives/labels_softseg/sub-ucl05/anat/{sub-ucl05_T2w_softseg.nii.gz => sub-ucl05_space-other_T2w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-ucl06/anat/{sub-ucl06_T1w_softseg.json => sub-ucl06_flip-1_mt-on_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-ucl06/anat/{sub-ucl06_flip-1_mt-on_MTS_softseg.nii.gz => sub-ucl06_flip-1_mt-on_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-ucl06/anat/{sub-ucl06_T2star_softseg.json => sub-ucl06_flip-2_mt-off_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-ucl06/anat/{sub-ucl06_flip-2_mt-off_MTS_softseg.nii.gz => sub-ucl06_flip-2_mt-off_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-ucl06/anat/{sub-ucl06_T2w_softseg.json => sub-ucl06_space-other_T1w_softseg.json} (100%) rename derivatives/labels_softseg/sub-ucl06/anat/{sub-ucl06_T1w_softseg.nii.gz => sub-ucl06_space-other_T1w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-ucl06/anat/{sub-ucl06_flip-1_mt-on_MTS_softseg.json => sub-ucl06_space-other_T2star_softseg.json} (100%) rename derivatives/labels_softseg/sub-ucl06/anat/{sub-ucl06_T2star_softseg.nii.gz => sub-ucl06_space-other_T2star_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-ucl06/anat/{sub-ucl06_flip-2_mt-off_MTS_softseg.json => sub-ucl06_space-other_T2w_softseg.json} (100%) rename derivatives/labels_softseg/sub-ucl06/anat/{sub-ucl06_T2w_softseg.nii.gz => sub-ucl06_space-other_T2w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-unf01/anat/{sub-unf01_T1w_softseg.json => sub-unf01_flip-1_mt-on_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-unf01/anat/{sub-unf01_flip-1_mt-on_MTS_softseg.nii.gz => sub-unf01_flip-1_mt-on_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-unf01/anat/{sub-unf01_flip-1_mt-on_MTS_softseg.json => sub-unf01_flip-2_mt-off_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-unf01/anat/{sub-unf01_flip-2_mt-off_MTS_softseg.nii.gz => sub-unf01_flip-2_mt-off_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-unf01/anat/{sub-unf01_flip-2_mt-off_MTS_softseg.json => sub-unf01_space-other_T1w_softseg.json} (100%) rename derivatives/labels_softseg/sub-unf01/anat/{sub-unf01_T1w_softseg.nii.gz => sub-unf01_space-other_T1w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-unf01/anat/{sub-unf01_T2star_softseg.json => sub-unf01_space-other_T2star_softseg.json} (100%) rename derivatives/labels_softseg/sub-unf01/anat/{sub-unf01_T2star_softseg.nii.gz => sub-unf01_space-other_T2star_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-unf01/anat/{sub-unf01_T2w_softseg.json => sub-unf01_space-other_T2w_softseg.json} (100%) rename derivatives/labels_softseg/sub-unf01/anat/{sub-unf01_T2w_softseg.nii.gz => sub-unf01_space-other_T2w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-unf02/anat/{sub-unf02_T1w_softseg.json => sub-unf02_flip-1_mt-on_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-unf02/anat/{sub-unf02_flip-1_mt-on_MTS_softseg.nii.gz => sub-unf02_flip-1_mt-on_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-unf02/anat/{sub-unf02_T2star_softseg.json => sub-unf02_flip-2_mt-off_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-unf02/anat/{sub-unf02_flip-2_mt-off_MTS_softseg.nii.gz => sub-unf02_flip-2_mt-off_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-unf02/anat/{sub-unf02_T2w_softseg.json => sub-unf02_space-other_T1w_softseg.json} (100%) rename derivatives/labels_softseg/sub-unf02/anat/{sub-unf02_T1w_softseg.nii.gz => sub-unf02_space-other_T1w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-unf02/anat/{sub-unf02_flip-1_mt-on_MTS_softseg.json => sub-unf02_space-other_T2star_softseg.json} (100%) rename derivatives/labels_softseg/sub-unf02/anat/{sub-unf02_T2star_softseg.nii.gz => sub-unf02_space-other_T2star_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-unf02/anat/{sub-unf02_flip-2_mt-off_MTS_softseg.json => sub-unf02_space-other_T2w_softseg.json} (100%) rename derivatives/labels_softseg/sub-unf02/anat/{sub-unf02_T2w_softseg.nii.gz => sub-unf02_space-other_T2w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-unf03/anat/{sub-unf03_T1w_softseg.json => sub-unf03_flip-1_mt-on_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-unf03/anat/{sub-unf03_flip-1_mt-on_MTS_softseg.nii.gz => sub-unf03_flip-1_mt-on_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-unf03/anat/{sub-unf03_T2star_softseg.json => sub-unf03_flip-2_mt-off_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-unf03/anat/{sub-unf03_flip-2_mt-off_MTS_softseg.nii.gz => sub-unf03_flip-2_mt-off_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-unf03/anat/{sub-unf03_T2w_softseg.json => sub-unf03_space-other_T1w_softseg.json} (100%) rename derivatives/labels_softseg/sub-unf03/anat/{sub-unf03_T1w_softseg.nii.gz => sub-unf03_space-other_T1w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-unf03/anat/{sub-unf03_flip-1_mt-on_MTS_softseg.json => sub-unf03_space-other_T2star_softseg.json} (100%) rename derivatives/labels_softseg/sub-unf03/anat/{sub-unf03_T2star_softseg.nii.gz => sub-unf03_space-other_T2star_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-unf03/anat/{sub-unf03_flip-2_mt-off_MTS_softseg.json => sub-unf03_space-other_T2w_softseg.json} (100%) rename derivatives/labels_softseg/sub-unf03/anat/{sub-unf03_T2w_softseg.nii.gz => sub-unf03_space-other_T2w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-unf04/anat/{sub-unf04_T1w_softseg.json => sub-unf04_flip-1_mt-on_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-unf04/anat/{sub-unf04_flip-1_mt-on_MTS_softseg.nii.gz => sub-unf04_flip-1_mt-on_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-unf04/anat/{sub-unf04_T2star_softseg.json => sub-unf04_flip-2_mt-off_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-unf04/anat/{sub-unf04_flip-2_mt-off_MTS_softseg.nii.gz => sub-unf04_flip-2_mt-off_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-unf04/anat/{sub-unf04_T2w_softseg.json => sub-unf04_space-other_T1w_softseg.json} (100%) rename derivatives/labels_softseg/sub-unf04/anat/{sub-unf04_T1w_softseg.nii.gz => sub-unf04_space-other_T1w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-unf04/anat/{sub-unf04_flip-1_mt-on_MTS_softseg.json => sub-unf04_space-other_T2star_softseg.json} (100%) rename derivatives/labels_softseg/sub-unf04/anat/{sub-unf04_T2star_softseg.nii.gz => sub-unf04_space-other_T2star_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-unf04/anat/{sub-unf04_flip-2_mt-off_MTS_softseg.json => sub-unf04_space-other_T2w_softseg.json} (100%) rename derivatives/labels_softseg/sub-unf04/anat/{sub-unf04_T2w_softseg.nii.gz => sub-unf04_space-other_T2w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-unf05/anat/{sub-unf05_T1w_softseg.json => sub-unf05_flip-1_mt-on_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-unf05/anat/{sub-unf05_flip-1_mt-on_MTS_softseg.nii.gz => sub-unf05_flip-1_mt-on_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-unf05/anat/{sub-unf05_flip-1_mt-on_MTS_softseg.json => sub-unf05_flip-2_mt-off_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-unf05/anat/{sub-unf05_flip-2_mt-off_MTS_softseg.nii.gz => sub-unf05_flip-2_mt-off_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-unf05/anat/{sub-unf05_flip-2_mt-off_MTS_softseg.json => sub-unf05_space-other_T1w_softseg.json} (100%) rename derivatives/labels_softseg/sub-unf05/anat/{sub-unf05_T1w_softseg.nii.gz => sub-unf05_space-other_T1w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-unf05/anat/{sub-unf05_T2star_softseg.json => sub-unf05_space-other_T2star_softseg.json} (100%) rename derivatives/labels_softseg/sub-unf05/anat/{sub-unf05_T2star_softseg.nii.gz => sub-unf05_space-other_T2star_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-unf05/anat/{sub-unf05_T2w_softseg.json => sub-unf05_space-other_T2w_softseg.json} (100%) rename derivatives/labels_softseg/sub-unf05/anat/{sub-unf05_T2w_softseg.nii.gz => sub-unf05_space-other_T2w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-unf06/anat/{sub-unf06_T1w_softseg.json => sub-unf06_flip-1_mt-on_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-unf06/anat/{sub-unf06_flip-1_mt-on_MTS_softseg.nii.gz => sub-unf06_flip-1_mt-on_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-unf06/anat/{sub-unf06_T2star_softseg.json => sub-unf06_flip-2_mt-off_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-unf06/anat/{sub-unf06_flip-2_mt-off_MTS_softseg.nii.gz => sub-unf06_flip-2_mt-off_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-unf06/anat/{sub-unf06_T2w_softseg.json => sub-unf06_space-other_T1w_softseg.json} (100%) rename derivatives/labels_softseg/sub-unf06/anat/{sub-unf06_T1w_softseg.nii.gz => sub-unf06_space-other_T1w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-unf06/anat/{sub-unf06_flip-1_mt-on_MTS_softseg.json => sub-unf06_space-other_T2star_softseg.json} (100%) rename derivatives/labels_softseg/sub-unf06/anat/{sub-unf06_T2star_softseg.nii.gz => sub-unf06_space-other_T2star_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-unf06/anat/{sub-unf06_flip-2_mt-off_MTS_softseg.json => sub-unf06_space-other_T2w_softseg.json} (100%) rename derivatives/labels_softseg/sub-unf06/anat/{sub-unf06_T2w_softseg.nii.gz => sub-unf06_space-other_T2w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-unf07/anat/{sub-unf07_T1w_softseg.json => sub-unf07_flip-1_mt-on_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-unf07/anat/{sub-unf07_flip-1_mt-on_MTS_softseg.nii.gz => sub-unf07_flip-1_mt-on_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-unf07/anat/{sub-unf07_T2star_softseg.json => sub-unf07_flip-2_mt-off_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-unf07/anat/{sub-unf07_flip-2_mt-off_MTS_softseg.nii.gz => sub-unf07_flip-2_mt-off_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-unf07/anat/{sub-unf07_T2w_softseg.json => sub-unf07_space-other_T1w_softseg.json} (100%) rename derivatives/labels_softseg/sub-unf07/anat/{sub-unf07_T1w_softseg.nii.gz => sub-unf07_space-other_T1w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-unf07/anat/{sub-unf07_flip-1_mt-on_MTS_softseg.json => sub-unf07_space-other_T2star_softseg.json} (100%) rename derivatives/labels_softseg/sub-unf07/anat/{sub-unf07_T2star_softseg.nii.gz => sub-unf07_space-other_T2star_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-unf07/anat/{sub-unf07_flip-2_mt-off_MTS_softseg.json => sub-unf07_space-other_T2w_softseg.json} (100%) rename derivatives/labels_softseg/sub-unf07/anat/{sub-unf07_T2w_softseg.nii.gz => sub-unf07_space-other_T2w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-vallHebron01/anat/{sub-vallHebron01_T1w_softseg.json => sub-vallHebron01_flip-1_mt-on_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-vallHebron01/anat/{sub-vallHebron01_flip-1_mt-on_MTS_softseg.nii.gz => sub-vallHebron01_flip-1_mt-on_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-vallHebron01/anat/{sub-vallHebron01_T2star_softseg.json => sub-vallHebron01_flip-2_mt-off_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-vallHebron01/anat/{sub-vallHebron01_flip-2_mt-off_MTS_softseg.nii.gz => sub-vallHebron01_flip-2_mt-off_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-vallHebron01/anat/{sub-vallHebron01_T2w_softseg.json => sub-vallHebron01_space-other_T1w_softseg.json} (100%) rename derivatives/labels_softseg/sub-vallHebron01/anat/{sub-vallHebron01_T1w_softseg.nii.gz => sub-vallHebron01_space-other_T1w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-vallHebron01/anat/{sub-vallHebron01_flip-1_mt-on_MTS_softseg.json => sub-vallHebron01_space-other_T2star_softseg.json} (100%) rename derivatives/labels_softseg/sub-vallHebron01/anat/{sub-vallHebron01_T2star_softseg.nii.gz => sub-vallHebron01_space-other_T2star_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-vallHebron01/anat/{sub-vallHebron01_flip-2_mt-off_MTS_softseg.json => sub-vallHebron01_space-other_T2w_softseg.json} (100%) rename derivatives/labels_softseg/sub-vallHebron01/anat/{sub-vallHebron01_T2w_softseg.nii.gz => sub-vallHebron01_space-other_T2w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-vallHebron02/anat/{sub-vallHebron02_T1w_softseg.json => sub-vallHebron02_flip-1_mt-on_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-vallHebron02/anat/{sub-vallHebron02_flip-1_mt-on_MTS_softseg.nii.gz => sub-vallHebron02_flip-1_mt-on_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-vallHebron02/anat/{sub-vallHebron02_T2star_softseg.json => sub-vallHebron02_flip-2_mt-off_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-vallHebron02/anat/{sub-vallHebron02_flip-2_mt-off_MTS_softseg.nii.gz => sub-vallHebron02_flip-2_mt-off_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-vallHebron02/anat/{sub-vallHebron02_T2w_softseg.json => sub-vallHebron02_space-other_T1w_softseg.json} (100%) rename derivatives/labels_softseg/sub-vallHebron02/anat/{sub-vallHebron02_T1w_softseg.nii.gz => sub-vallHebron02_space-other_T1w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-vallHebron02/anat/{sub-vallHebron02_flip-1_mt-on_MTS_softseg.json => sub-vallHebron02_space-other_T2star_softseg.json} (100%) rename derivatives/labels_softseg/sub-vallHebron02/anat/{sub-vallHebron02_T2star_softseg.nii.gz => sub-vallHebron02_space-other_T2star_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-vallHebron02/anat/{sub-vallHebron02_flip-2_mt-off_MTS_softseg.json => sub-vallHebron02_space-other_T2w_softseg.json} (100%) rename derivatives/labels_softseg/sub-vallHebron02/anat/{sub-vallHebron02_T2w_softseg.nii.gz => sub-vallHebron02_space-other_T2w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-vallHebron03/anat/{sub-vallHebron03_T1w_softseg.json => sub-vallHebron03_flip-1_mt-on_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-vallHebron03/anat/{sub-vallHebron03_flip-1_mt-on_MTS_softseg.nii.gz => sub-vallHebron03_flip-1_mt-on_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-vallHebron03/anat/{sub-vallHebron03_T2star_softseg.json => sub-vallHebron03_flip-2_mt-off_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-vallHebron03/anat/{sub-vallHebron03_flip-2_mt-off_MTS_softseg.nii.gz => sub-vallHebron03_flip-2_mt-off_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-vallHebron03/anat/{sub-vallHebron03_T2w_softseg.json => sub-vallHebron03_space-other_T1w_softseg.json} (100%) rename derivatives/labels_softseg/sub-vallHebron03/anat/{sub-vallHebron03_T1w_softseg.nii.gz => sub-vallHebron03_space-other_T1w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-vallHebron03/anat/{sub-vallHebron03_flip-1_mt-on_MTS_softseg.json => sub-vallHebron03_space-other_T2star_softseg.json} (100%) rename derivatives/labels_softseg/sub-vallHebron03/anat/{sub-vallHebron03_T2star_softseg.nii.gz => sub-vallHebron03_space-other_T2star_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-vallHebron03/anat/{sub-vallHebron03_flip-2_mt-off_MTS_softseg.json => sub-vallHebron03_space-other_T2w_softseg.json} (100%) rename derivatives/labels_softseg/sub-vallHebron03/anat/{sub-vallHebron03_T2w_softseg.nii.gz => sub-vallHebron03_space-other_T2w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-vallHebron04/anat/{sub-vallHebron04_T1w_softseg.json => sub-vallHebron04_flip-1_mt-on_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-vallHebron04/anat/{sub-vallHebron04_flip-1_mt-on_MTS_softseg.nii.gz => sub-vallHebron04_flip-1_mt-on_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-vallHebron04/anat/{sub-vallHebron04_T2star_softseg.json => sub-vallHebron04_flip-2_mt-off_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-vallHebron04/anat/{sub-vallHebron04_flip-2_mt-off_MTS_softseg.nii.gz => sub-vallHebron04_flip-2_mt-off_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-vallHebron04/anat/{sub-vallHebron04_T2w_softseg.json => sub-vallHebron04_space-other_T1w_softseg.json} (100%) rename derivatives/labels_softseg/sub-vallHebron04/anat/{sub-vallHebron04_T1w_softseg.nii.gz => sub-vallHebron04_space-other_T1w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-vallHebron04/anat/{sub-vallHebron04_flip-1_mt-on_MTS_softseg.json => sub-vallHebron04_space-other_T2star_softseg.json} (100%) rename derivatives/labels_softseg/sub-vallHebron04/anat/{sub-vallHebron04_T2star_softseg.nii.gz => sub-vallHebron04_space-other_T2star_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-vallHebron04/anat/{sub-vallHebron04_flip-2_mt-off_MTS_softseg.json => sub-vallHebron04_space-other_T2w_softseg.json} (100%) rename derivatives/labels_softseg/sub-vallHebron04/anat/{sub-vallHebron04_T2w_softseg.nii.gz => sub-vallHebron04_space-other_T2w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-vallHebron05/anat/{sub-vallHebron05_T1w_softseg.json => sub-vallHebron05_flip-1_mt-on_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-vallHebron05/anat/{sub-vallHebron05_flip-1_mt-on_MTS_softseg.nii.gz => sub-vallHebron05_flip-1_mt-on_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-vallHebron05/anat/{sub-vallHebron05_T2star_softseg.json => sub-vallHebron05_flip-2_mt-off_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-vallHebron05/anat/{sub-vallHebron05_flip-2_mt-off_MTS_softseg.nii.gz => sub-vallHebron05_flip-2_mt-off_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-vallHebron05/anat/{sub-vallHebron05_T2w_softseg.json => sub-vallHebron05_space-other_T1w_softseg.json} (100%) rename derivatives/labels_softseg/sub-vallHebron05/anat/{sub-vallHebron05_T1w_softseg.nii.gz => sub-vallHebron05_space-other_T1w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-vallHebron05/anat/{sub-vallHebron05_flip-1_mt-on_MTS_softseg.json => sub-vallHebron05_space-other_T2star_softseg.json} (100%) rename derivatives/labels_softseg/sub-vallHebron05/anat/{sub-vallHebron05_T2star_softseg.nii.gz => sub-vallHebron05_space-other_T2star_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-vallHebron05/anat/{sub-vallHebron05_flip-2_mt-off_MTS_softseg.json => sub-vallHebron05_space-other_T2w_softseg.json} (100%) rename derivatives/labels_softseg/sub-vallHebron05/anat/{sub-vallHebron05_T2w_softseg.nii.gz => sub-vallHebron05_space-other_T2w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-vallHebron06/anat/{sub-vallHebron06_flip-1_mt-on_MTS_softseg.json => sub-vallHebron06_flip-1_mt-on_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-vallHebron06/anat/{sub-vallHebron06_flip-1_mt-on_MTS_softseg.nii.gz => sub-vallHebron06_flip-1_mt-on_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-vallHebron06/anat/{sub-vallHebron06_flip-2_mt-off_MTS_softseg.json => sub-vallHebron06_flip-2_mt-off_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-vallHebron06/anat/{sub-vallHebron06_flip-2_mt-off_MTS_softseg.nii.gz => sub-vallHebron06_flip-2_mt-off_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-vallHebron06/anat/{sub-vallHebron06_T1w_softseg.json => sub-vallHebron06_space-other_T1w_softseg.json} (100%) rename derivatives/labels_softseg/sub-vallHebron06/anat/{sub-vallHebron06_T1w_softseg.nii.gz => sub-vallHebron06_space-other_T1w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-vallHebron06/anat/{sub-vallHebron06_T2star_softseg.json => sub-vallHebron06_space-other_T2star_softseg.json} (100%) rename derivatives/labels_softseg/sub-vallHebron06/anat/{sub-vallHebron06_T2star_softseg.nii.gz => sub-vallHebron06_space-other_T2star_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-vallHebron06/anat/{sub-vallHebron06_T2w_softseg.json => sub-vallHebron06_space-other_T2w_softseg.json} (100%) rename derivatives/labels_softseg/sub-vallHebron06/anat/{sub-vallHebron06_T2w_softseg.nii.gz => sub-vallHebron06_space-other_T2w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-vallHebron07/anat/{sub-vallHebron07_T1w_softseg.json => sub-vallHebron07_flip-1_mt-on_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-vallHebron07/anat/{sub-vallHebron07_flip-1_mt-on_MTS_softseg.nii.gz => sub-vallHebron07_flip-1_mt-on_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-vallHebron07/anat/{sub-vallHebron07_T2star_softseg.json => sub-vallHebron07_flip-2_mt-off_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-vallHebron07/anat/{sub-vallHebron07_flip-2_mt-off_MTS_softseg.nii.gz => sub-vallHebron07_flip-2_mt-off_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-vallHebron07/anat/{sub-vallHebron07_T2w_softseg.json => sub-vallHebron07_space-other_T1w_softseg.json} (100%) rename derivatives/labels_softseg/sub-vallHebron07/anat/{sub-vallHebron07_T1w_softseg.nii.gz => sub-vallHebron07_space-other_T1w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-vallHebron07/anat/{sub-vallHebron07_flip-1_mt-on_MTS_softseg.json => sub-vallHebron07_space-other_T2star_softseg.json} (100%) rename derivatives/labels_softseg/sub-vallHebron07/anat/{sub-vallHebron07_T2star_softseg.nii.gz => sub-vallHebron07_space-other_T2star_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-vallHebron07/anat/{sub-vallHebron07_flip-2_mt-off_MTS_softseg.json => sub-vallHebron07_space-other_T2w_softseg.json} (100%) rename derivatives/labels_softseg/sub-vallHebron07/anat/{sub-vallHebron07_T2w_softseg.nii.gz => sub-vallHebron07_space-other_T2w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-vuiisAchieva01/anat/{sub-vuiisAchieva01_T1w_softseg.json => sub-vuiisAchieva01_flip-1_mt-on_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-vuiisAchieva01/anat/{sub-vuiisAchieva01_flip-1_mt-on_MTS_softseg.nii.gz => sub-vuiisAchieva01_flip-1_mt-on_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-vuiisAchieva01/anat/{sub-vuiisAchieva01_T2star_softseg.json => sub-vuiisAchieva01_flip-2_mt-off_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-vuiisAchieva01/anat/{sub-vuiisAchieva01_flip-2_mt-off_MTS_softseg.nii.gz => sub-vuiisAchieva01_flip-2_mt-off_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-vuiisAchieva01/anat/{sub-vuiisAchieva01_T2w_softseg.json => sub-vuiisAchieva01_space-other_T1w_softseg.json} (100%) rename derivatives/labels_softseg/sub-vuiisAchieva01/anat/{sub-vuiisAchieva01_T1w_softseg.nii.gz => sub-vuiisAchieva01_space-other_T1w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-vuiisAchieva01/anat/{sub-vuiisAchieva01_flip-1_mt-on_MTS_softseg.json => sub-vuiisAchieva01_space-other_T2star_softseg.json} (100%) rename derivatives/labels_softseg/sub-vuiisAchieva01/anat/{sub-vuiisAchieva01_T2star_softseg.nii.gz => sub-vuiisAchieva01_space-other_T2star_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-vuiisAchieva01/anat/{sub-vuiisAchieva01_flip-2_mt-off_MTS_softseg.json => sub-vuiisAchieva01_space-other_T2w_softseg.json} (100%) rename derivatives/labels_softseg/sub-vuiisAchieva01/anat/{sub-vuiisAchieva01_T2w_softseg.nii.gz => sub-vuiisAchieva01_space-other_T2w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-vuiisAchieva02/anat/{sub-vuiisAchieva02_T1w_softseg.json => sub-vuiisAchieva02_flip-1_mt-on_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-vuiisAchieva02/anat/{sub-vuiisAchieva02_flip-1_mt-on_MTS_softseg.nii.gz => sub-vuiisAchieva02_flip-1_mt-on_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-vuiisAchieva02/anat/{sub-vuiisAchieva02_T2star_softseg.json => sub-vuiisAchieva02_flip-2_mt-off_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-vuiisAchieva02/anat/{sub-vuiisAchieva02_flip-2_mt-off_MTS_softseg.nii.gz => sub-vuiisAchieva02_flip-2_mt-off_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-vuiisAchieva02/anat/{sub-vuiisAchieva02_T2w_softseg.json => sub-vuiisAchieva02_space-other_T1w_softseg.json} (100%) rename derivatives/labels_softseg/sub-vuiisAchieva02/anat/{sub-vuiisAchieva02_T1w_softseg.nii.gz => sub-vuiisAchieva02_space-other_T1w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-vuiisAchieva02/anat/{sub-vuiisAchieva02_flip-1_mt-on_MTS_softseg.json => sub-vuiisAchieva02_space-other_T2star_softseg.json} (100%) rename derivatives/labels_softseg/sub-vuiisAchieva02/anat/{sub-vuiisAchieva02_T2star_softseg.nii.gz => sub-vuiisAchieva02_space-other_T2star_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-vuiisAchieva02/anat/{sub-vuiisAchieva02_flip-2_mt-off_MTS_softseg.json => sub-vuiisAchieva02_space-other_T2w_softseg.json} (100%) rename derivatives/labels_softseg/sub-vuiisAchieva02/anat/{sub-vuiisAchieva02_T2w_softseg.nii.gz => sub-vuiisAchieva02_space-other_T2w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-vuiisAchieva03/anat/{sub-vuiisAchieva03_flip-1_mt-on_MTS_softseg.json => sub-vuiisAchieva03_flip-1_mt-on_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-vuiisAchieva03/anat/{sub-vuiisAchieva03_flip-1_mt-on_MTS_softseg.nii.gz => sub-vuiisAchieva03_flip-1_mt-on_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-vuiisAchieva03/anat/{sub-vuiisAchieva03_flip-2_mt-off_MTS_softseg.json => sub-vuiisAchieva03_flip-2_mt-off_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-vuiisAchieva03/anat/{sub-vuiisAchieva03_flip-2_mt-off_MTS_softseg.nii.gz => sub-vuiisAchieva03_flip-2_mt-off_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-vuiisAchieva03/anat/{sub-vuiisAchieva03_T1w_softseg.json => sub-vuiisAchieva03_space-other_T1w_softseg.json} (100%) rename derivatives/labels_softseg/sub-vuiisAchieva03/anat/{sub-vuiisAchieva03_T1w_softseg.nii.gz => sub-vuiisAchieva03_space-other_T1w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-vuiisAchieva03/anat/{sub-vuiisAchieva03_T2star_softseg.json => sub-vuiisAchieva03_space-other_T2star_softseg.json} (100%) rename derivatives/labels_softseg/sub-vuiisAchieva03/anat/{sub-vuiisAchieva03_T2star_softseg.nii.gz => sub-vuiisAchieva03_space-other_T2star_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-vuiisAchieva03/anat/{sub-vuiisAchieva03_T2w_softseg.json => sub-vuiisAchieva03_space-other_T2w_softseg.json} (100%) rename derivatives/labels_softseg/sub-vuiisAchieva03/anat/{sub-vuiisAchieva03_T2w_softseg.nii.gz => sub-vuiisAchieva03_space-other_T2w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-vuiisAchieva04/anat/{sub-vuiisAchieva04_T1w_softseg.json => sub-vuiisAchieva04_flip-1_mt-on_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-vuiisAchieva04/anat/{sub-vuiisAchieva04_flip-1_mt-on_MTS_softseg.nii.gz => sub-vuiisAchieva04_flip-1_mt-on_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-vuiisAchieva04/anat/{sub-vuiisAchieva04_T2star_softseg.json => sub-vuiisAchieva04_flip-2_mt-off_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-vuiisAchieva04/anat/{sub-vuiisAchieva04_flip-2_mt-off_MTS_softseg.nii.gz => sub-vuiisAchieva04_flip-2_mt-off_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-vuiisAchieva04/anat/{sub-vuiisAchieva04_T2w_softseg.json => sub-vuiisAchieva04_space-other_T1w_softseg.json} (100%) rename derivatives/labels_softseg/sub-vuiisAchieva04/anat/{sub-vuiisAchieva04_T1w_softseg.nii.gz => sub-vuiisAchieva04_space-other_T1w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-vuiisAchieva04/anat/{sub-vuiisAchieva04_flip-1_mt-on_MTS_softseg.json => sub-vuiisAchieva04_space-other_T2star_softseg.json} (100%) rename derivatives/labels_softseg/sub-vuiisAchieva04/anat/{sub-vuiisAchieva04_T2star_softseg.nii.gz => sub-vuiisAchieva04_space-other_T2star_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-vuiisAchieva04/anat/{sub-vuiisAchieva04_flip-2_mt-off_MTS_softseg.json => sub-vuiisAchieva04_space-other_T2w_softseg.json} (100%) rename derivatives/labels_softseg/sub-vuiisAchieva04/anat/{sub-vuiisAchieva04_T2w_softseg.nii.gz => sub-vuiisAchieva04_space-other_T2w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-vuiisAchieva05/anat/{sub-vuiisAchieva05_T1w_softseg.json => sub-vuiisAchieva05_flip-1_mt-on_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-vuiisAchieva05/anat/{sub-vuiisAchieva05_flip-1_mt-on_MTS_softseg.nii.gz => sub-vuiisAchieva05_flip-1_mt-on_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-vuiisAchieva05/anat/{sub-vuiisAchieva05_T2star_softseg.json => sub-vuiisAchieva05_flip-2_mt-off_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-vuiisAchieva05/anat/{sub-vuiisAchieva05_flip-2_mt-off_MTS_softseg.nii.gz => sub-vuiisAchieva05_flip-2_mt-off_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-vuiisAchieva05/anat/{sub-vuiisAchieva05_T2w_softseg.json => sub-vuiisAchieva05_space-other_T1w_softseg.json} (100%) rename derivatives/labels_softseg/sub-vuiisAchieva05/anat/{sub-vuiisAchieva05_T1w_softseg.nii.gz => sub-vuiisAchieva05_space-other_T1w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-vuiisAchieva05/anat/{sub-vuiisAchieva05_flip-1_mt-on_MTS_softseg.json => sub-vuiisAchieva05_space-other_T2star_softseg.json} (100%) rename derivatives/labels_softseg/sub-vuiisAchieva05/anat/{sub-vuiisAchieva05_T2star_softseg.nii.gz => sub-vuiisAchieva05_space-other_T2star_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-vuiisAchieva05/anat/{sub-vuiisAchieva05_flip-2_mt-off_MTS_softseg.json => sub-vuiisAchieva05_space-other_T2w_softseg.json} (100%) rename derivatives/labels_softseg/sub-vuiisAchieva05/anat/{sub-vuiisAchieva05_T2w_softseg.nii.gz => sub-vuiisAchieva05_space-other_T2w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-vuiisAchieva06/anat/{sub-vuiisAchieva06_T1w_softseg.json => sub-vuiisAchieva06_flip-1_mt-on_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-vuiisAchieva06/anat/{sub-vuiisAchieva06_flip-1_mt-on_MTS_softseg.nii.gz => sub-vuiisAchieva06_flip-1_mt-on_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-vuiisAchieva06/anat/{sub-vuiisAchieva06_T2star_softseg.json => sub-vuiisAchieva06_flip-2_mt-off_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-vuiisAchieva06/anat/{sub-vuiisAchieva06_flip-2_mt-off_MTS_softseg.nii.gz => sub-vuiisAchieva06_flip-2_mt-off_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-vuiisAchieva06/anat/{sub-vuiisAchieva06_T2w_softseg.json => sub-vuiisAchieva06_space-other_T1w_softseg.json} (100%) rename derivatives/labels_softseg/sub-vuiisAchieva06/anat/{sub-vuiisAchieva06_T1w_softseg.nii.gz => sub-vuiisAchieva06_space-other_T1w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-vuiisAchieva06/anat/{sub-vuiisAchieva06_flip-1_mt-on_MTS_softseg.json => sub-vuiisAchieva06_space-other_T2star_softseg.json} (100%) rename derivatives/labels_softseg/sub-vuiisAchieva06/anat/{sub-vuiisAchieva06_T2star_softseg.nii.gz => sub-vuiisAchieva06_space-other_T2star_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-vuiisAchieva06/anat/{sub-vuiisAchieva06_flip-2_mt-off_MTS_softseg.json => sub-vuiisAchieva06_space-other_T2w_softseg.json} (100%) rename derivatives/labels_softseg/sub-vuiisAchieva06/anat/{sub-vuiisAchieva06_T2w_softseg.nii.gz => sub-vuiisAchieva06_space-other_T2w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-vuiisIngenia01/anat/{sub-vuiisIngenia01_flip-1_mt-on_MTS_softseg.json => sub-vuiisIngenia01_flip-1_mt-on_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-vuiisIngenia01/anat/{sub-vuiisIngenia01_flip-1_mt-on_MTS_softseg.nii.gz => sub-vuiisIngenia01_flip-1_mt-on_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-vuiisIngenia01/anat/{sub-vuiisIngenia01_flip-2_mt-off_MTS_softseg.json => sub-vuiisIngenia01_flip-2_mt-off_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-vuiisIngenia01/anat/{sub-vuiisIngenia01_flip-2_mt-off_MTS_softseg.nii.gz => sub-vuiisIngenia01_flip-2_mt-off_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-vuiisIngenia01/anat/{sub-vuiisIngenia01_T1w_softseg.json => sub-vuiisIngenia01_space-other_T1w_softseg.json} (100%) rename derivatives/labels_softseg/sub-vuiisIngenia01/anat/{sub-vuiisIngenia01_T1w_softseg.nii.gz => sub-vuiisIngenia01_space-other_T1w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-vuiisIngenia01/anat/{sub-vuiisIngenia01_T2star_softseg.json => sub-vuiisIngenia01_space-other_T2star_softseg.json} (100%) rename derivatives/labels_softseg/sub-vuiisIngenia01/anat/{sub-vuiisIngenia01_T2star_softseg.nii.gz => sub-vuiisIngenia01_space-other_T2star_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-vuiisIngenia01/anat/{sub-vuiisIngenia01_T2w_softseg.json => sub-vuiisIngenia01_space-other_T2w_softseg.json} (100%) rename derivatives/labels_softseg/sub-vuiisIngenia01/anat/{sub-vuiisIngenia01_T2w_softseg.nii.gz => sub-vuiisIngenia01_space-other_T2w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-vuiisIngenia02/anat/{sub-vuiisIngenia02_T1w_softseg.json => sub-vuiisIngenia02_flip-1_mt-on_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-vuiisIngenia02/anat/{sub-vuiisIngenia02_flip-1_mt-on_MTS_softseg.nii.gz => sub-vuiisIngenia02_flip-1_mt-on_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-vuiisIngenia02/anat/{sub-vuiisIngenia02_T2star_softseg.json => sub-vuiisIngenia02_flip-2_mt-off_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-vuiisIngenia02/anat/{sub-vuiisIngenia02_flip-2_mt-off_MTS_softseg.nii.gz => sub-vuiisIngenia02_flip-2_mt-off_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-vuiisIngenia02/anat/{sub-vuiisIngenia02_T2w_softseg.json => sub-vuiisIngenia02_space-other_T1w_softseg.json} (100%) rename derivatives/labels_softseg/sub-vuiisIngenia02/anat/{sub-vuiisIngenia02_T1w_softseg.nii.gz => sub-vuiisIngenia02_space-other_T1w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-vuiisIngenia02/anat/{sub-vuiisIngenia02_flip-1_mt-on_MTS_softseg.json => sub-vuiisIngenia02_space-other_T2star_softseg.json} (100%) rename derivatives/labels_softseg/sub-vuiisIngenia02/anat/{sub-vuiisIngenia02_T2star_softseg.nii.gz => sub-vuiisIngenia02_space-other_T2star_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-vuiisIngenia02/anat/{sub-vuiisIngenia02_flip-2_mt-off_MTS_softseg.json => sub-vuiisIngenia02_space-other_T2w_softseg.json} (100%) rename derivatives/labels_softseg/sub-vuiisIngenia02/anat/{sub-vuiisIngenia02_T2w_softseg.nii.gz => sub-vuiisIngenia02_space-other_T2w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-vuiisIngenia03/anat/{sub-vuiisIngenia03_T1w_softseg.json => sub-vuiisIngenia03_flip-1_mt-on_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-vuiisIngenia03/anat/{sub-vuiisIngenia03_flip-1_mt-on_MTS_softseg.nii.gz => sub-vuiisIngenia03_flip-1_mt-on_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-vuiisIngenia03/anat/{sub-vuiisIngenia03_T2star_softseg.json => sub-vuiisIngenia03_flip-2_mt-off_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-vuiisIngenia03/anat/{sub-vuiisIngenia03_flip-2_mt-off_MTS_softseg.nii.gz => sub-vuiisIngenia03_flip-2_mt-off_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-vuiisIngenia03/anat/{sub-vuiisIngenia03_T2w_softseg.json => sub-vuiisIngenia03_space-other_T1w_softseg.json} (100%) rename derivatives/labels_softseg/sub-vuiisIngenia03/anat/{sub-vuiisIngenia03_T1w_softseg.nii.gz => sub-vuiisIngenia03_space-other_T1w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-vuiisIngenia03/anat/{sub-vuiisIngenia03_flip-1_mt-on_MTS_softseg.json => sub-vuiisIngenia03_space-other_T2star_softseg.json} (100%) rename derivatives/labels_softseg/sub-vuiisIngenia03/anat/{sub-vuiisIngenia03_T2star_softseg.nii.gz => sub-vuiisIngenia03_space-other_T2star_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-vuiisIngenia03/anat/{sub-vuiisIngenia03_flip-2_mt-off_MTS_softseg.json => sub-vuiisIngenia03_space-other_T2w_softseg.json} (100%) rename derivatives/labels_softseg/sub-vuiisIngenia03/anat/{sub-vuiisIngenia03_T2w_softseg.nii.gz => sub-vuiisIngenia03_space-other_T2w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-vuiisIngenia04/anat/{sub-vuiisIngenia04_T1w_softseg.json => sub-vuiisIngenia04_flip-1_mt-on_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-vuiisIngenia04/anat/{sub-vuiisIngenia04_flip-1_mt-on_MTS_softseg.nii.gz => sub-vuiisIngenia04_flip-1_mt-on_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-vuiisIngenia04/anat/{sub-vuiisIngenia04_T2star_softseg.json => sub-vuiisIngenia04_flip-2_mt-off_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-vuiisIngenia04/anat/{sub-vuiisIngenia04_flip-2_mt-off_MTS_softseg.nii.gz => sub-vuiisIngenia04_flip-2_mt-off_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-vuiisIngenia04/anat/{sub-vuiisIngenia04_T2w_softseg.json => sub-vuiisIngenia04_space-other_T1w_softseg.json} (100%) rename derivatives/labels_softseg/sub-vuiisIngenia04/anat/{sub-vuiisIngenia04_T1w_softseg.nii.gz => sub-vuiisIngenia04_space-other_T1w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-vuiisIngenia04/anat/{sub-vuiisIngenia04_flip-1_mt-on_MTS_softseg.json => sub-vuiisIngenia04_space-other_T2star_softseg.json} (100%) rename derivatives/labels_softseg/sub-vuiisIngenia04/anat/{sub-vuiisIngenia04_T2star_softseg.nii.gz => sub-vuiisIngenia04_space-other_T2star_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-vuiisIngenia04/anat/{sub-vuiisIngenia04_flip-2_mt-off_MTS_softseg.json => sub-vuiisIngenia04_space-other_T2w_softseg.json} (100%) rename derivatives/labels_softseg/sub-vuiisIngenia04/anat/{sub-vuiisIngenia04_T2w_softseg.nii.gz => sub-vuiisIngenia04_space-other_T2w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-vuiisIngenia05/anat/{sub-vuiisIngenia05_flip-1_mt-on_MTS_softseg.json => sub-vuiisIngenia05_flip-1_mt-on_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-vuiisIngenia05/anat/{sub-vuiisIngenia05_flip-1_mt-on_MTS_softseg.nii.gz => sub-vuiisIngenia05_flip-1_mt-on_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-vuiisIngenia05/anat/{sub-vuiisIngenia05_flip-2_mt-off_MTS_softseg.json => sub-vuiisIngenia05_flip-2_mt-off_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-vuiisIngenia05/anat/{sub-vuiisIngenia05_flip-2_mt-off_MTS_softseg.nii.gz => sub-vuiisIngenia05_flip-2_mt-off_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-vuiisIngenia05/anat/{sub-vuiisIngenia05_T1w_softseg.json => sub-vuiisIngenia05_space-other_T1w_softseg.json} (100%) rename derivatives/labels_softseg/sub-vuiisIngenia05/anat/{sub-vuiisIngenia05_T1w_softseg.nii.gz => sub-vuiisIngenia05_space-other_T1w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-vuiisIngenia05/anat/{sub-vuiisIngenia05_T2star_softseg.json => sub-vuiisIngenia05_space-other_T2star_softseg.json} (100%) rename derivatives/labels_softseg/sub-vuiisIngenia05/anat/{sub-vuiisIngenia05_T2star_softseg.nii.gz => sub-vuiisIngenia05_space-other_T2star_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-vuiisIngenia05/anat/{sub-vuiisIngenia05_T2w_softseg.json => sub-vuiisIngenia05_space-other_T2w_softseg.json} (100%) rename derivatives/labels_softseg/sub-vuiisIngenia05/anat/{sub-vuiisIngenia05_T2w_softseg.nii.gz => sub-vuiisIngenia05_space-other_T2w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-vuiisIngenia06/anat/{sub-vuiisIngenia06_T1w_softseg.json => sub-vuiisIngenia06_flip-1_mt-on_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-vuiisIngenia06/anat/{sub-vuiisIngenia06_flip-1_mt-on_MTS_softseg.nii.gz => sub-vuiisIngenia06_flip-1_mt-on_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-vuiisIngenia06/anat/{sub-vuiisIngenia06_T2star_softseg.json => sub-vuiisIngenia06_flip-2_mt-off_space-other_MTS_softseg.json} (100%) rename derivatives/labels_softseg/sub-vuiisIngenia06/anat/{sub-vuiisIngenia06_flip-2_mt-off_MTS_softseg.nii.gz => sub-vuiisIngenia06_flip-2_mt-off_space-other_MTS_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-vuiisIngenia06/anat/{sub-vuiisIngenia06_T2w_softseg.json => sub-vuiisIngenia06_space-other_T1w_softseg.json} (100%) rename derivatives/labels_softseg/sub-vuiisIngenia06/anat/{sub-vuiisIngenia06_T1w_softseg.nii.gz => sub-vuiisIngenia06_space-other_T1w_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-vuiisIngenia06/anat/{sub-vuiisIngenia06_flip-1_mt-on_MTS_softseg.json => sub-vuiisIngenia06_space-other_T2star_softseg.json} (100%) rename derivatives/labels_softseg/sub-vuiisIngenia06/anat/{sub-vuiisIngenia06_T2star_softseg.nii.gz => sub-vuiisIngenia06_space-other_T2star_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-vuiisIngenia06/anat/{sub-vuiisIngenia06_flip-2_mt-off_MTS_softseg.json => sub-vuiisIngenia06_space-other_T2w_softseg.json} (100%) rename derivatives/labels_softseg/sub-vuiisIngenia06/anat/{sub-vuiisIngenia06_T2w_softseg.nii.gz => sub-vuiisIngenia06_space-other_T2w_softseg.nii.gz} (100%) diff --git a/derivatives/labels/sub-amu01/anat/sub-amu01_flip-1_mt-on_MTS_seg-manual.json b/derivatives/labels/sub-amu01/anat/sub-amu01_flip-1_mt-on_space-other_MTS_seg-manual.json similarity index 100% rename from derivatives/labels/sub-amu01/anat/sub-amu01_flip-1_mt-on_MTS_seg-manual.json rename to derivatives/labels/sub-amu01/anat/sub-amu01_flip-1_mt-on_space-other_MTS_seg-manual.json diff --git a/derivatives/labels/sub-amu01/anat/sub-amu01_flip-1_mt-on_MTS_seg-manual.nii.gz b/derivatives/labels/sub-amu01/anat/sub-amu01_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz similarity index 100% rename from derivatives/labels/sub-amu01/anat/sub-amu01_flip-1_mt-on_MTS_seg-manual.nii.gz rename to derivatives/labels/sub-amu01/anat/sub-amu01_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz diff --git a/derivatives/labels/sub-amu01/anat/sub-amu01_T2star_seg-manual.json b/derivatives/labels/sub-amu01/anat/sub-amu01_flip-2_mt-off_space-other_MTS_seg-manual.json similarity index 100% rename from derivatives/labels/sub-amu01/anat/sub-amu01_T2star_seg-manual.json rename to derivatives/labels/sub-amu01/anat/sub-amu01_flip-2_mt-off_space-other_MTS_seg-manual.json diff --git a/derivatives/labels/sub-amu01/anat/sub-amu01_flip-2_mt-off_MTS_seg-manual.nii.gz b/derivatives/labels/sub-amu01/anat/sub-amu01_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz similarity index 100% rename from derivatives/labels/sub-amu01/anat/sub-amu01_flip-2_mt-off_MTS_seg-manual.nii.gz rename to derivatives/labels/sub-amu01/anat/sub-amu01_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz diff --git a/derivatives/labels/sub-amu01/anat/sub-amu01_T1w_labels-disc-manual.json b/derivatives/labels/sub-amu01/anat/sub-amu01_space-other_T1w_labels-disc-manual.json similarity index 100% rename from derivatives/labels/sub-amu01/anat/sub-amu01_T1w_labels-disc-manual.json rename to derivatives/labels/sub-amu01/anat/sub-amu01_space-other_T1w_labels-disc-manual.json diff --git a/derivatives/labels/sub-amu01/anat/sub-amu01_T1w_labels-disc-manual.nii.gz b/derivatives/labels/sub-amu01/anat/sub-amu01_space-other_T1w_labels-disc-manual.nii.gz similarity index 100% rename from derivatives/labels/sub-amu01/anat/sub-amu01_T1w_labels-disc-manual.nii.gz rename to derivatives/labels/sub-amu01/anat/sub-amu01_space-other_T1w_labels-disc-manual.nii.gz diff --git 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a/derivatives/labels_softseg/sub-beijingGE01/anat/sub-beijingGE01_T2star_softseg.json b/derivatives/labels_softseg/sub-beijingGE01/anat/sub-beijingGE01_space-other_T2star_softseg.json similarity index 100% rename from derivatives/labels_softseg/sub-beijingGE01/anat/sub-beijingGE01_T2star_softseg.json rename to derivatives/labels_softseg/sub-beijingGE01/anat/sub-beijingGE01_space-other_T2star_softseg.json diff --git a/derivatives/labels_softseg/sub-beijingGE01/anat/sub-beijingGE01_T2star_softseg.nii.gz b/derivatives/labels_softseg/sub-beijingGE01/anat/sub-beijingGE01_space-other_T2star_softseg.nii.gz similarity index 100% rename from derivatives/labels_softseg/sub-beijingGE01/anat/sub-beijingGE01_T2star_softseg.nii.gz rename to derivatives/labels_softseg/sub-beijingGE01/anat/sub-beijingGE01_space-other_T2star_softseg.nii.gz diff --git a/derivatives/labels_softseg/sub-beijingGE01/anat/sub-beijingGE01_T2w_softseg.json 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a/derivatives/labels_softseg/sub-beijingGE02/anat/sub-beijingGE02_T2w_softseg.nii.gz b/derivatives/labels_softseg/sub-beijingGE02/anat/sub-beijingGE02_space-other_T2w_softseg.nii.gz similarity index 100% rename from derivatives/labels_softseg/sub-beijingGE02/anat/sub-beijingGE02_T2w_softseg.nii.gz rename to derivatives/labels_softseg/sub-beijingGE02/anat/sub-beijingGE02_space-other_T2w_softseg.nii.gz diff --git a/derivatives/labels_softseg/sub-beijingGE03/anat/sub-beijingGE03_T1w_softseg.json b/derivatives/labels_softseg/sub-beijingGE03/anat/sub-beijingGE03_space-other_T1w_softseg.json similarity index 100% rename from derivatives/labels_softseg/sub-beijingGE03/anat/sub-beijingGE03_T1w_softseg.json rename to derivatives/labels_softseg/sub-beijingGE03/anat/sub-beijingGE03_space-other_T1w_softseg.json diff --git a/derivatives/labels_softseg/sub-beijingGE03/anat/sub-beijingGE03_T1w_softseg.nii.gz 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a/derivatives/labels_softseg/sub-beijingGE04/anat/sub-beijingGE04_T2star_softseg.json b/derivatives/labels_softseg/sub-beijingGE04/anat/sub-beijingGE04_space-other_T2star_softseg.json similarity index 100% rename from derivatives/labels_softseg/sub-beijingGE04/anat/sub-beijingGE04_T2star_softseg.json rename to derivatives/labels_softseg/sub-beijingGE04/anat/sub-beijingGE04_space-other_T2star_softseg.json diff --git a/derivatives/labels_softseg/sub-beijingGE04/anat/sub-beijingGE04_T2star_softseg.nii.gz b/derivatives/labels_softseg/sub-beijingGE04/anat/sub-beijingGE04_space-other_T2star_softseg.nii.gz similarity index 100% rename from derivatives/labels_softseg/sub-beijingGE04/anat/sub-beijingGE04_T2star_softseg.nii.gz rename to derivatives/labels_softseg/sub-beijingGE04/anat/sub-beijingGE04_space-other_T2star_softseg.nii.gz diff --git a/derivatives/labels_softseg/sub-beijingGE04/anat/sub-beijingGE04_T2w_softseg.json 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a/derivatives/labels_softseg/sub-beijingVerio01/anat/sub-beijingVerio01_T2star_softseg.nii.gz b/derivatives/labels_softseg/sub-beijingVerio01/anat/sub-beijingVerio01_space-other_T2star_softseg.nii.gz similarity index 100% rename from derivatives/labels_softseg/sub-beijingVerio01/anat/sub-beijingVerio01_T2star_softseg.nii.gz rename to derivatives/labels_softseg/sub-beijingVerio01/anat/sub-beijingVerio01_space-other_T2star_softseg.nii.gz diff --git a/derivatives/labels_softseg/sub-beijingVerio01/anat/sub-beijingVerio01_T2w_softseg.json b/derivatives/labels_softseg/sub-beijingVerio01/anat/sub-beijingVerio01_space-other_T2w_softseg.json similarity index 100% rename from derivatives/labels_softseg/sub-beijingVerio01/anat/sub-beijingVerio01_T2w_softseg.json rename to derivatives/labels_softseg/sub-beijingVerio01/anat/sub-beijingVerio01_space-other_T2w_softseg.json diff --git a/derivatives/labels_softseg/sub-beijingVerio01/anat/sub-beijingVerio01_T2w_softseg.nii.gz 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--git a/derivatives/labels_softseg/sub-brnoCeitec01/anat/sub-brnoCeitec01_T2w_softseg.json b/derivatives/labels_softseg/sub-brnoCeitec01/anat/sub-brnoCeitec01_space-other_T1w_softseg.json similarity index 100% rename from derivatives/labels_softseg/sub-brnoCeitec01/anat/sub-brnoCeitec01_T2w_softseg.json rename to derivatives/labels_softseg/sub-brnoCeitec01/anat/sub-brnoCeitec01_space-other_T1w_softseg.json diff --git a/derivatives/labels_softseg/sub-brnoCeitec01/anat/sub-brnoCeitec01_T1w_softseg.nii.gz b/derivatives/labels_softseg/sub-brnoCeitec01/anat/sub-brnoCeitec01_space-other_T1w_softseg.nii.gz similarity index 100% rename from derivatives/labels_softseg/sub-brnoCeitec01/anat/sub-brnoCeitec01_T1w_softseg.nii.gz rename to derivatives/labels_softseg/sub-brnoCeitec01/anat/sub-brnoCeitec01_space-other_T1w_softseg.nii.gz diff --git a/derivatives/labels_softseg/sub-brnoCeitec01/anat/sub-brnoCeitec01_flip-1_mt-on_MTS_softseg.json 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--git a/derivatives/labels_softseg/sub-fslPrisma02/anat/sub-fslPrisma02_T2star_softseg.json b/derivatives/labels_softseg/sub-fslPrisma02/anat/sub-fslPrisma02_flip-2_mt-off_space-other_MTS_softseg.json similarity index 100% rename from derivatives/labels_softseg/sub-fslPrisma02/anat/sub-fslPrisma02_T2star_softseg.json rename to derivatives/labels_softseg/sub-fslPrisma02/anat/sub-fslPrisma02_flip-2_mt-off_space-other_MTS_softseg.json diff --git a/derivatives/labels_softseg/sub-fslPrisma02/anat/sub-fslPrisma02_flip-2_mt-off_MTS_softseg.nii.gz b/derivatives/labels_softseg/sub-fslPrisma02/anat/sub-fslPrisma02_flip-2_mt-off_space-other_MTS_softseg.nii.gz similarity index 100% rename from derivatives/labels_softseg/sub-fslPrisma02/anat/sub-fslPrisma02_flip-2_mt-off_MTS_softseg.nii.gz rename to derivatives/labels_softseg/sub-fslPrisma02/anat/sub-fslPrisma02_flip-2_mt-off_space-other_MTS_softseg.nii.gz diff --git a/derivatives/labels_softseg/sub-fslPrisma02/anat/sub-fslPrisma02_T2w_softseg.json 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a/derivatives/labels_softseg/sub-oxfordFmrib07/anat/sub-oxfordFmrib07_flip-1_mt-on_MTS_softseg.json b/derivatives/labels_softseg/sub-oxfordFmrib07/anat/sub-oxfordFmrib07_space-other_T2star_softseg.json similarity index 100% rename from derivatives/labels_softseg/sub-oxfordFmrib07/anat/sub-oxfordFmrib07_flip-1_mt-on_MTS_softseg.json rename to derivatives/labels_softseg/sub-oxfordFmrib07/anat/sub-oxfordFmrib07_space-other_T2star_softseg.json diff --git a/derivatives/labels_softseg/sub-oxfordFmrib07/anat/sub-oxfordFmrib07_T2star_softseg.nii.gz b/derivatives/labels_softseg/sub-oxfordFmrib07/anat/sub-oxfordFmrib07_space-other_T2star_softseg.nii.gz similarity index 100% rename from derivatives/labels_softseg/sub-oxfordFmrib07/anat/sub-oxfordFmrib07_T2star_softseg.nii.gz rename to derivatives/labels_softseg/sub-oxfordFmrib07/anat/sub-oxfordFmrib07_space-other_T2star_softseg.nii.gz diff --git a/derivatives/labels_softseg/sub-oxfordFmrib07/anat/sub-oxfordFmrib07_flip-2_mt-off_MTS_softseg.json 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diff --git a/derivatives/labels_softseg/sub-tokyoIngenia07/anat/sub-tokyoIngenia07_T2star_softseg.nii.gz b/derivatives/labels_softseg/sub-tokyoIngenia07/anat/sub-tokyoIngenia07_space-other_T2star_softseg.nii.gz similarity index 100% rename from derivatives/labels_softseg/sub-tokyoIngenia07/anat/sub-tokyoIngenia07_T2star_softseg.nii.gz rename to derivatives/labels_softseg/sub-tokyoIngenia07/anat/sub-tokyoIngenia07_space-other_T2star_softseg.nii.gz diff --git a/derivatives/labels_softseg/sub-tokyoIngenia07/anat/sub-tokyoIngenia07_flip-2_mt-off_MTS_softseg.json b/derivatives/labels_softseg/sub-tokyoIngenia07/anat/sub-tokyoIngenia07_space-other_T2w_softseg.json similarity index 100% rename from derivatives/labels_softseg/sub-tokyoIngenia07/anat/sub-tokyoIngenia07_flip-2_mt-off_MTS_softseg.json rename to derivatives/labels_softseg/sub-tokyoIngenia07/anat/sub-tokyoIngenia07_space-other_T2w_softseg.json diff --git 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a/derivatives/labels_softseg/sub-tokyoSkyra01/anat/sub-tokyoSkyra01_flip-1_mt-on_MTS_softseg.nii.gz b/derivatives/labels_softseg/sub-tokyoSkyra01/anat/sub-tokyoSkyra01_flip-1_mt-on_space-other_MTS_softseg.nii.gz similarity index 100% rename from derivatives/labels_softseg/sub-tokyoSkyra01/anat/sub-tokyoSkyra01_flip-1_mt-on_MTS_softseg.nii.gz rename to derivatives/labels_softseg/sub-tokyoSkyra01/anat/sub-tokyoSkyra01_flip-1_mt-on_space-other_MTS_softseg.nii.gz diff --git a/derivatives/labels_softseg/sub-tokyoSkyra01/anat/sub-tokyoSkyra01_flip-2_mt-off_MTS_softseg.json b/derivatives/labels_softseg/sub-tokyoSkyra01/anat/sub-tokyoSkyra01_flip-2_mt-off_space-other_MTS_softseg.json similarity index 100% rename from derivatives/labels_softseg/sub-tokyoSkyra01/anat/sub-tokyoSkyra01_flip-2_mt-off_MTS_softseg.json rename to derivatives/labels_softseg/sub-tokyoSkyra01/anat/sub-tokyoSkyra01_flip-2_mt-off_space-other_MTS_softseg.json diff --git 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to derivatives/labels_softseg/sub-tokyoSkyra03/anat/sub-tokyoSkyra03_space-other_T1w_softseg.json diff --git a/derivatives/labels_softseg/sub-tokyoSkyra03/anat/sub-tokyoSkyra03_T1w_softseg.nii.gz b/derivatives/labels_softseg/sub-tokyoSkyra03/anat/sub-tokyoSkyra03_space-other_T1w_softseg.nii.gz similarity index 100% rename from derivatives/labels_softseg/sub-tokyoSkyra03/anat/sub-tokyoSkyra03_T1w_softseg.nii.gz rename to derivatives/labels_softseg/sub-tokyoSkyra03/anat/sub-tokyoSkyra03_space-other_T1w_softseg.nii.gz diff --git a/derivatives/labels_softseg/sub-tokyoSkyra03/anat/sub-tokyoSkyra03_flip-1_mt-on_MTS_softseg.json b/derivatives/labels_softseg/sub-tokyoSkyra03/anat/sub-tokyoSkyra03_space-other_T2star_softseg.json similarity index 100% rename from derivatives/labels_softseg/sub-tokyoSkyra03/anat/sub-tokyoSkyra03_flip-1_mt-on_MTS_softseg.json rename to derivatives/labels_softseg/sub-tokyoSkyra03/anat/sub-tokyoSkyra03_space-other_T2star_softseg.json diff --git a/derivatives/labels_softseg/sub-tokyoSkyra03/anat/sub-tokyoSkyra03_T2star_softseg.nii.gz b/derivatives/labels_softseg/sub-tokyoSkyra03/anat/sub-tokyoSkyra03_space-other_T2star_softseg.nii.gz similarity index 100% rename from derivatives/labels_softseg/sub-tokyoSkyra03/anat/sub-tokyoSkyra03_T2star_softseg.nii.gz rename to derivatives/labels_softseg/sub-tokyoSkyra03/anat/sub-tokyoSkyra03_space-other_T2star_softseg.nii.gz diff --git a/derivatives/labels_softseg/sub-tokyoSkyra03/anat/sub-tokyoSkyra03_flip-2_mt-off_MTS_softseg.json b/derivatives/labels_softseg/sub-tokyoSkyra03/anat/sub-tokyoSkyra03_space-other_T2w_softseg.json similarity index 100% rename from derivatives/labels_softseg/sub-tokyoSkyra03/anat/sub-tokyoSkyra03_flip-2_mt-off_MTS_softseg.json rename to derivatives/labels_softseg/sub-tokyoSkyra03/anat/sub-tokyoSkyra03_space-other_T2w_softseg.json diff --git a/derivatives/labels_softseg/sub-tokyoSkyra03/anat/sub-tokyoSkyra03_T2w_softseg.nii.gz b/derivatives/labels_softseg/sub-tokyoSkyra03/anat/sub-tokyoSkyra03_space-other_T2w_softseg.nii.gz similarity index 100% rename from derivatives/labels_softseg/sub-tokyoSkyra03/anat/sub-tokyoSkyra03_T2w_softseg.nii.gz rename to derivatives/labels_softseg/sub-tokyoSkyra03/anat/sub-tokyoSkyra03_space-other_T2w_softseg.nii.gz diff --git a/derivatives/labels_softseg/sub-tokyoSkyra04/anat/sub-tokyoSkyra04_T1w_softseg.json b/derivatives/labels_softseg/sub-tokyoSkyra04/anat/sub-tokyoSkyra04_flip-1_mt-on_space-other_MTS_softseg.json similarity index 100% rename from derivatives/labels_softseg/sub-tokyoSkyra04/anat/sub-tokyoSkyra04_T1w_softseg.json rename to derivatives/labels_softseg/sub-tokyoSkyra04/anat/sub-tokyoSkyra04_flip-1_mt-on_space-other_MTS_softseg.json diff --git a/derivatives/labels_softseg/sub-tokyoSkyra04/anat/sub-tokyoSkyra04_flip-1_mt-on_MTS_softseg.nii.gz b/derivatives/labels_softseg/sub-tokyoSkyra04/anat/sub-tokyoSkyra04_flip-1_mt-on_space-other_MTS_softseg.nii.gz similarity index 100% rename from derivatives/labels_softseg/sub-tokyoSkyra04/anat/sub-tokyoSkyra04_flip-1_mt-on_MTS_softseg.nii.gz rename to derivatives/labels_softseg/sub-tokyoSkyra04/anat/sub-tokyoSkyra04_flip-1_mt-on_space-other_MTS_softseg.nii.gz diff --git a/derivatives/labels_softseg/sub-tokyoSkyra04/anat/sub-tokyoSkyra04_T2star_softseg.json b/derivatives/labels_softseg/sub-tokyoSkyra04/anat/sub-tokyoSkyra04_flip-2_mt-off_space-other_MTS_softseg.json similarity index 100% rename from derivatives/labels_softseg/sub-tokyoSkyra04/anat/sub-tokyoSkyra04_T2star_softseg.json rename to derivatives/labels_softseg/sub-tokyoSkyra04/anat/sub-tokyoSkyra04_flip-2_mt-off_space-other_MTS_softseg.json diff --git a/derivatives/labels_softseg/sub-tokyoSkyra04/anat/sub-tokyoSkyra04_flip-2_mt-off_MTS_softseg.nii.gz b/derivatives/labels_softseg/sub-tokyoSkyra04/anat/sub-tokyoSkyra04_flip-2_mt-off_space-other_MTS_softseg.nii.gz similarity index 100% rename from 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derivatives/labels_softseg/sub-tokyoSkyra04/anat/sub-tokyoSkyra04_space-other_T1w_softseg.nii.gz diff --git a/derivatives/labels_softseg/sub-tokyoSkyra04/anat/sub-tokyoSkyra04_flip-1_mt-on_MTS_softseg.json b/derivatives/labels_softseg/sub-tokyoSkyra04/anat/sub-tokyoSkyra04_space-other_T2star_softseg.json similarity index 100% rename from derivatives/labels_softseg/sub-tokyoSkyra04/anat/sub-tokyoSkyra04_flip-1_mt-on_MTS_softseg.json rename to derivatives/labels_softseg/sub-tokyoSkyra04/anat/sub-tokyoSkyra04_space-other_T2star_softseg.json diff --git a/derivatives/labels_softseg/sub-tokyoSkyra04/anat/sub-tokyoSkyra04_T2star_softseg.nii.gz b/derivatives/labels_softseg/sub-tokyoSkyra04/anat/sub-tokyoSkyra04_space-other_T2star_softseg.nii.gz similarity index 100% rename from derivatives/labels_softseg/sub-tokyoSkyra04/anat/sub-tokyoSkyra04_T2star_softseg.nii.gz rename to derivatives/labels_softseg/sub-tokyoSkyra04/anat/sub-tokyoSkyra04_space-other_T2star_softseg.nii.gz diff --git a/derivatives/labels_softseg/sub-tokyoSkyra04/anat/sub-tokyoSkyra04_flip-2_mt-off_MTS_softseg.json b/derivatives/labels_softseg/sub-tokyoSkyra04/anat/sub-tokyoSkyra04_space-other_T2w_softseg.json similarity index 100% rename from derivatives/labels_softseg/sub-tokyoSkyra04/anat/sub-tokyoSkyra04_flip-2_mt-off_MTS_softseg.json rename to derivatives/labels_softseg/sub-tokyoSkyra04/anat/sub-tokyoSkyra04_space-other_T2w_softseg.json diff --git a/derivatives/labels_softseg/sub-tokyoSkyra04/anat/sub-tokyoSkyra04_T2w_softseg.nii.gz b/derivatives/labels_softseg/sub-tokyoSkyra04/anat/sub-tokyoSkyra04_space-other_T2w_softseg.nii.gz similarity index 100% rename from derivatives/labels_softseg/sub-tokyoSkyra04/anat/sub-tokyoSkyra04_T2w_softseg.nii.gz rename to derivatives/labels_softseg/sub-tokyoSkyra04/anat/sub-tokyoSkyra04_space-other_T2w_softseg.nii.gz diff --git a/derivatives/labels_softseg/sub-tokyoSkyra05/anat/sub-tokyoSkyra05_T1w_softseg.json b/derivatives/labels_softseg/sub-tokyoSkyra05/anat/sub-tokyoSkyra05_flip-1_mt-on_space-other_MTS_softseg.json similarity index 100% rename from derivatives/labels_softseg/sub-tokyoSkyra05/anat/sub-tokyoSkyra05_T1w_softseg.json rename to derivatives/labels_softseg/sub-tokyoSkyra05/anat/sub-tokyoSkyra05_flip-1_mt-on_space-other_MTS_softseg.json diff --git a/derivatives/labels_softseg/sub-tokyoSkyra05/anat/sub-tokyoSkyra05_flip-1_mt-on_MTS_softseg.nii.gz b/derivatives/labels_softseg/sub-tokyoSkyra05/anat/sub-tokyoSkyra05_flip-1_mt-on_space-other_MTS_softseg.nii.gz similarity index 100% rename from derivatives/labels_softseg/sub-tokyoSkyra05/anat/sub-tokyoSkyra05_flip-1_mt-on_MTS_softseg.nii.gz rename to derivatives/labels_softseg/sub-tokyoSkyra05/anat/sub-tokyoSkyra05_flip-1_mt-on_space-other_MTS_softseg.nii.gz diff --git a/derivatives/labels_softseg/sub-tokyoSkyra05/anat/sub-tokyoSkyra05_T2star_softseg.json b/derivatives/labels_softseg/sub-tokyoSkyra05/anat/sub-tokyoSkyra05_flip-2_mt-off_space-other_MTS_softseg.json similarity index 100% rename from derivatives/labels_softseg/sub-tokyoSkyra05/anat/sub-tokyoSkyra05_T2star_softseg.json rename to derivatives/labels_softseg/sub-tokyoSkyra05/anat/sub-tokyoSkyra05_flip-2_mt-off_space-other_MTS_softseg.json diff --git a/derivatives/labels_softseg/sub-tokyoSkyra05/anat/sub-tokyoSkyra05_flip-2_mt-off_MTS_softseg.nii.gz b/derivatives/labels_softseg/sub-tokyoSkyra05/anat/sub-tokyoSkyra05_flip-2_mt-off_space-other_MTS_softseg.nii.gz similarity index 100% rename from derivatives/labels_softseg/sub-tokyoSkyra05/anat/sub-tokyoSkyra05_flip-2_mt-off_MTS_softseg.nii.gz rename to derivatives/labels_softseg/sub-tokyoSkyra05/anat/sub-tokyoSkyra05_flip-2_mt-off_space-other_MTS_softseg.nii.gz diff --git a/derivatives/labels_softseg/sub-tokyoSkyra05/anat/sub-tokyoSkyra05_T2w_softseg.json 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a/derivatives/labels_softseg/sub-tokyoSkyra06/anat/sub-tokyoSkyra06_flip-1_mt-on_MTS_softseg.nii.gz b/derivatives/labels_softseg/sub-tokyoSkyra06/anat/sub-tokyoSkyra06_flip-1_mt-on_space-other_MTS_softseg.nii.gz similarity index 100% rename from derivatives/labels_softseg/sub-tokyoSkyra06/anat/sub-tokyoSkyra06_flip-1_mt-on_MTS_softseg.nii.gz rename to derivatives/labels_softseg/sub-tokyoSkyra06/anat/sub-tokyoSkyra06_flip-1_mt-on_space-other_MTS_softseg.nii.gz diff --git a/derivatives/labels_softseg/sub-tokyoSkyra06/anat/sub-tokyoSkyra06_T2star_softseg.json b/derivatives/labels_softseg/sub-tokyoSkyra06/anat/sub-tokyoSkyra06_flip-2_mt-off_space-other_MTS_softseg.json similarity index 100% rename from derivatives/labels_softseg/sub-tokyoSkyra06/anat/sub-tokyoSkyra06_T2star_softseg.json rename to derivatives/labels_softseg/sub-tokyoSkyra06/anat/sub-tokyoSkyra06_flip-2_mt-off_space-other_MTS_softseg.json diff --git a/derivatives/labels_softseg/sub-tokyoSkyra06/anat/sub-tokyoSkyra06_flip-2_mt-off_MTS_softseg.nii.gz b/derivatives/labels_softseg/sub-tokyoSkyra06/anat/sub-tokyoSkyra06_flip-2_mt-off_space-other_MTS_softseg.nii.gz similarity index 100% rename from derivatives/labels_softseg/sub-tokyoSkyra06/anat/sub-tokyoSkyra06_flip-2_mt-off_MTS_softseg.nii.gz rename to derivatives/labels_softseg/sub-tokyoSkyra06/anat/sub-tokyoSkyra06_flip-2_mt-off_space-other_MTS_softseg.nii.gz diff --git a/derivatives/labels_softseg/sub-tokyoSkyra06/anat/sub-tokyoSkyra06_T2w_softseg.json b/derivatives/labels_softseg/sub-tokyoSkyra06/anat/sub-tokyoSkyra06_space-other_T1w_softseg.json similarity index 100% rename from derivatives/labels_softseg/sub-tokyoSkyra06/anat/sub-tokyoSkyra06_T2w_softseg.json rename to derivatives/labels_softseg/sub-tokyoSkyra06/anat/sub-tokyoSkyra06_space-other_T1w_softseg.json diff --git a/derivatives/labels_softseg/sub-tokyoSkyra06/anat/sub-tokyoSkyra06_T1w_softseg.nii.gz 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b/derivatives/labels_softseg/sub-vuiisIngenia06/anat/sub-vuiisIngenia06_flip-1_mt-on_space-other_MTS_softseg.nii.gz similarity index 100% rename from derivatives/labels_softseg/sub-vuiisIngenia06/anat/sub-vuiisIngenia06_flip-1_mt-on_MTS_softseg.nii.gz rename to derivatives/labels_softseg/sub-vuiisIngenia06/anat/sub-vuiisIngenia06_flip-1_mt-on_space-other_MTS_softseg.nii.gz diff --git a/derivatives/labels_softseg/sub-vuiisIngenia06/anat/sub-vuiisIngenia06_T2star_softseg.json b/derivatives/labels_softseg/sub-vuiisIngenia06/anat/sub-vuiisIngenia06_flip-2_mt-off_space-other_MTS_softseg.json similarity index 100% rename from derivatives/labels_softseg/sub-vuiisIngenia06/anat/sub-vuiisIngenia06_T2star_softseg.json rename to derivatives/labels_softseg/sub-vuiisIngenia06/anat/sub-vuiisIngenia06_flip-2_mt-off_space-other_MTS_softseg.json diff --git a/derivatives/labels_softseg/sub-vuiisIngenia06/anat/sub-vuiisIngenia06_flip-2_mt-off_MTS_softseg.nii.gz b/derivatives/labels_softseg/sub-vuiisIngenia06/anat/sub-vuiisIngenia06_flip-2_mt-off_space-other_MTS_softseg.nii.gz similarity index 100% rename from derivatives/labels_softseg/sub-vuiisIngenia06/anat/sub-vuiisIngenia06_flip-2_mt-off_MTS_softseg.nii.gz rename to derivatives/labels_softseg/sub-vuiisIngenia06/anat/sub-vuiisIngenia06_flip-2_mt-off_space-other_MTS_softseg.nii.gz diff --git a/derivatives/labels_softseg/sub-vuiisIngenia06/anat/sub-vuiisIngenia06_T2w_softseg.json b/derivatives/labels_softseg/sub-vuiisIngenia06/anat/sub-vuiisIngenia06_space-other_T1w_softseg.json similarity index 100% rename from derivatives/labels_softseg/sub-vuiisIngenia06/anat/sub-vuiisIngenia06_T2w_softseg.json rename to derivatives/labels_softseg/sub-vuiisIngenia06/anat/sub-vuiisIngenia06_space-other_T1w_softseg.json diff --git a/derivatives/labels_softseg/sub-vuiisIngenia06/anat/sub-vuiisIngenia06_T1w_softseg.nii.gz b/derivatives/labels_softseg/sub-vuiisIngenia06/anat/sub-vuiisIngenia06_space-other_T1w_softseg.nii.gz similarity index 100% rename from derivatives/labels_softseg/sub-vuiisIngenia06/anat/sub-vuiisIngenia06_T1w_softseg.nii.gz rename to derivatives/labels_softseg/sub-vuiisIngenia06/anat/sub-vuiisIngenia06_space-other_T1w_softseg.nii.gz diff --git a/derivatives/labels_softseg/sub-vuiisIngenia06/anat/sub-vuiisIngenia06_flip-1_mt-on_MTS_softseg.json b/derivatives/labels_softseg/sub-vuiisIngenia06/anat/sub-vuiisIngenia06_space-other_T2star_softseg.json similarity index 100% rename from derivatives/labels_softseg/sub-vuiisIngenia06/anat/sub-vuiisIngenia06_flip-1_mt-on_MTS_softseg.json rename to derivatives/labels_softseg/sub-vuiisIngenia06/anat/sub-vuiisIngenia06_space-other_T2star_softseg.json diff --git a/derivatives/labels_softseg/sub-vuiisIngenia06/anat/sub-vuiisIngenia06_T2star_softseg.nii.gz b/derivatives/labels_softseg/sub-vuiisIngenia06/anat/sub-vuiisIngenia06_space-other_T2star_softseg.nii.gz similarity index 100% rename from derivatives/labels_softseg/sub-vuiisIngenia06/anat/sub-vuiisIngenia06_T2star_softseg.nii.gz rename to derivatives/labels_softseg/sub-vuiisIngenia06/anat/sub-vuiisIngenia06_space-other_T2star_softseg.nii.gz diff --git a/derivatives/labels_softseg/sub-vuiisIngenia06/anat/sub-vuiisIngenia06_flip-2_mt-off_MTS_softseg.json b/derivatives/labels_softseg/sub-vuiisIngenia06/anat/sub-vuiisIngenia06_space-other_T2w_softseg.json similarity index 100% rename from derivatives/labels_softseg/sub-vuiisIngenia06/anat/sub-vuiisIngenia06_flip-2_mt-off_MTS_softseg.json rename to derivatives/labels_softseg/sub-vuiisIngenia06/anat/sub-vuiisIngenia06_space-other_T2w_softseg.json diff --git a/derivatives/labels_softseg/sub-vuiisIngenia06/anat/sub-vuiisIngenia06_T2w_softseg.nii.gz b/derivatives/labels_softseg/sub-vuiisIngenia06/anat/sub-vuiisIngenia06_space-other_T2w_softseg.nii.gz similarity index 100% rename from derivatives/labels_softseg/sub-vuiisIngenia06/anat/sub-vuiisIngenia06_T2w_softseg.nii.gz rename to derivatives/labels_softseg/sub-vuiisIngenia06/anat/sub-vuiisIngenia06_space-other_T2w_softseg.nii.gz From c9474079fa3959a239fc1c4310ece923995be48a Mon Sep 17 00:00:00 2001 From: Sandrine Bedard Date: Thu, 15 Feb 2024 15:05:04 -0500 Subject: [PATCH 04/21] change suffix --- ...n => sub-amu01_flip-1_mt-on_space-other_MTS_label-SC_seg.json} | 0 ...=> sub-amu01_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} | 0 ... => sub-amu01_flip-2_mt-off_space-other_MTS_label-SC_seg.json} | 0 ...> sub-amu01_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} | 0 ...eg-manual.json => sub-amu01_space-other_T1w_label-SC_seg.json} | 0 ...anual.nii.gz => sub-amu01_space-other_T1w_label-SC_seg.nii.gz} | 0 ...ual.json => sub-amu01_space-other_T1w_label-discs_dlabel.json} | 0 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sub-beijingGE03_space-other_T1w_label-discs_dlabel.nii.gz} | 0 ....json => sub-beijingGE03_space-other_T2star_label-SC_seg.json} | 0 ....gz => sub-beijingGE03_space-other_T2star_label-SC_seg.nii.gz} | 0 ...ual.json => sub-beijingGE03_space-other_T2w_label-SC_seg.json} | 0 ...nii.gz => sub-beijingGE03_space-other_T2w_label-SC_seg.nii.gz} | 0 ...on => sub-beijingGE03_space-other_T2w_label-discs_dlabel.json} | 0 ... => sub-beijingGE03_space-other_T2w_label-discs_dlabel.nii.gz} | 0 ...ual.json => sub-beijingGE03_rec-average_dwi_label-SC_seg.json} | 0 ...nii.gz => sub-beijingGE03_rec-average_dwi_label-SC_seg.nii.gz} | 0 ...ual.json => sub-beijingGE04_space-other_T1w_label-SC_seg.json} | 0 ...nii.gz => sub-beijingGE04_space-other_T1w_label-SC_seg.nii.gz} | 0 ...on => sub-beijingGE04_space-other_T1w_label-discs_dlabel.json} | 0 ... => sub-beijingGE04_space-other_T1w_label-discs_dlabel.nii.gz} | 0 ...ual.json => sub-beijingGE04_space-other_T2w_label-SC_seg.json} | 0 ...nii.gz => sub-beijingGE04_space-other_T2w_label-SC_seg.nii.gz} | 0 ...on => sub-beijingGE04_space-other_T2w_label-discs_dlabel.json} | 0 ... => sub-beijingGE04_space-other_T2w_label-discs_dlabel.nii.gz} | 0 ...ual.json => sub-beijingGE04_rec-average_dwi_label-SC_seg.json} | 0 ...nii.gz => sub-beijingGE04_rec-average_dwi_label-SC_seg.nii.gz} | 0 ...eijingPrisma01_flip-1_mt-on_space-other_MTS_label-SC_seg.json} | 0 ...jingPrisma01_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} | 0 ...ijingPrisma01_flip-2_mt-off_space-other_MTS_label-SC_seg.json} | 0 ...ingPrisma01_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} | 0 ...json => sub-beijingPrisma01_space-other_T1w_label-SC_seg.json} | 0 ...gz => sub-beijingPrisma01_space-other_T1w_label-SC_seg.nii.gz} | 0 ...> sub-beijingPrisma01_space-other_T1w_label-discs_dlabel.json} | 0 ...sub-beijingPrisma01_space-other_T1w_label-discs_dlabel.nii.gz} | 0 ...n => sub-beijingPrisma01_space-other_T2star_label-SC_seg.json} | 0 ...=> sub-beijingPrisma01_space-other_T2star_label-SC_seg.nii.gz} | 0 ...json => sub-beijingPrisma01_space-other_T2w_label-SC_seg.json} | 0 ...gz => sub-beijingPrisma01_space-other_T2w_label-SC_seg.nii.gz} | 0 ...> sub-beijingPrisma01_space-other_T2w_label-discs_dlabel.json} | 0 ...sub-beijingPrisma01_space-other_T2w_label-discs_dlabel.nii.gz} | 0 ...json => sub-beijingPrisma01_rec-average_dwi_label-SC_seg.json} | 0 ...gz => sub-beijingPrisma01_rec-average_dwi_label-SC_seg.nii.gz} | 0 ...eijingPrisma02_flip-1_mt-on_space-other_MTS_label-SC_seg.json} | 0 ...jingPrisma02_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} | 0 ...ijingPrisma02_flip-2_mt-off_space-other_MTS_label-SC_seg.json} | 0 ...ingPrisma02_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} | 0 ...json => sub-beijingPrisma02_space-other_T1w_label-SC_seg.json} | 0 ...gz => sub-beijingPrisma02_space-other_T1w_label-SC_seg.nii.gz} | 0 ...> sub-beijingPrisma02_space-other_T1w_label-discs_dlabel.json} | 0 ...sub-beijingPrisma02_space-other_T1w_label-discs_dlabel.nii.gz} | 0 ...n => sub-beijingPrisma02_space-other_T2star_label-SC_seg.json} | 0 ...=> sub-beijingPrisma02_space-other_T2star_label-SC_seg.nii.gz} | 0 ...json => sub-beijingPrisma02_space-other_T2w_label-SC_seg.json} | 0 ...gz => sub-beijingPrisma02_space-other_T2w_label-SC_seg.nii.gz} | 0 ...> sub-beijingPrisma02_space-other_T2w_label-discs_dlabel.json} | 0 ...sub-beijingPrisma02_space-other_T2w_label-discs_dlabel.nii.gz} | 0 ...json => sub-beijingPrisma02_rec-average_dwi_label-SC_seg.json} | 0 ...gz => sub-beijingPrisma02_rec-average_dwi_label-SC_seg.nii.gz} | 0 ...eijingPrisma03_flip-1_mt-on_space-other_MTS_label-SC_seg.json} | 0 ...jingPrisma03_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} | 0 ...ijingPrisma03_flip-2_mt-off_space-other_MTS_label-SC_seg.json} | 0 ...ingPrisma03_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} | 0 ...json => sub-beijingPrisma03_space-other_T1w_label-SC_seg.json} | 0 ...gz => sub-beijingPrisma03_space-other_T1w_label-SC_seg.nii.gz} | 0 ...> sub-beijingPrisma03_space-other_T1w_label-discs_dlabel.json} | 0 ...sub-beijingPrisma03_space-other_T1w_label-discs_dlabel.nii.gz} | 0 ...n => sub-beijingPrisma03_space-other_T2star_label-SC_seg.json} | 0 ...=> sub-beijingPrisma03_space-other_T2star_label-SC_seg.nii.gz} | 0 ...json => sub-beijingPrisma03_space-other_T2w_label-SC_seg.json} | 0 ...gz => sub-beijingPrisma03_space-other_T2w_label-SC_seg.nii.gz} | 0 ...> sub-beijingPrisma03_space-other_T2w_label-discs_dlabel.json} | 0 ...sub-beijingPrisma03_space-other_T2w_label-discs_dlabel.nii.gz} | 0 ...json => sub-beijingPrisma03_rec-average_dwi_label-SC_seg.json} | 0 ...gz => sub-beijingPrisma03_rec-average_dwi_label-SC_seg.nii.gz} | 0 ...eijingPrisma04_flip-1_mt-on_space-other_MTS_label-SC_seg.json} | 0 ...jingPrisma04_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} | 0 ...ijingPrisma04_flip-2_mt-off_space-other_MTS_label-SC_seg.json} | 0 ...ingPrisma04_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} | 0 ...json => sub-beijingPrisma04_space-other_T1w_label-SC_seg.json} | 0 ...gz => sub-beijingPrisma04_space-other_T1w_label-SC_seg.nii.gz} | 0 ...> sub-beijingPrisma04_space-other_T1w_label-discs_dlabel.json} | 0 ...sub-beijingPrisma04_space-other_T1w_label-discs_dlabel.nii.gz} | 0 ...n => sub-beijingPrisma04_space-other_T2star_label-SC_seg.json} | 0 ...=> sub-beijingPrisma04_space-other_T2star_label-SC_seg.nii.gz} | 0 ...json => sub-beijingPrisma04_space-other_T2w_label-SC_seg.json} | 0 ...gz => sub-beijingPrisma04_space-other_T2w_label-SC_seg.nii.gz} | 0 ...> sub-beijingPrisma04_space-other_T2w_label-discs_dlabel.json} | 0 ...sub-beijingPrisma04_space-other_T2w_label-discs_dlabel.nii.gz} | 0 ...json => sub-beijingPrisma04_rec-average_dwi_label-SC_seg.json} | 0 ...gz => sub-beijingPrisma04_rec-average_dwi_label-SC_seg.nii.gz} | 0 ...eijingPrisma05_flip-1_mt-on_space-other_MTS_label-SC_seg.json} | 0 ...jingPrisma05_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} | 0 ...ijingPrisma05_flip-2_mt-off_space-other_MTS_label-SC_seg.json} | 0 ...ingPrisma05_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} | 0 ...json => sub-beijingPrisma05_space-other_T1w_label-SC_seg.json} | 0 ...gz => sub-beijingPrisma05_space-other_T1w_label-SC_seg.nii.gz} | 0 ...> sub-beijingPrisma05_space-other_T1w_label-discs_dlabel.json} | 0 ...sub-beijingPrisma05_space-other_T1w_label-discs_dlabel.nii.gz} | 0 ...n => sub-beijingPrisma05_space-other_T2star_label-SC_seg.json} | 0 ...=> sub-beijingPrisma05_space-other_T2star_label-SC_seg.nii.gz} | 0 ...json => sub-beijingPrisma05_space-other_T2w_label-SC_seg.json} | 0 ...gz => sub-beijingPrisma05_space-other_T2w_label-SC_seg.nii.gz} | 0 ...> sub-beijingPrisma05_space-other_T2w_label-discs_dlabel.json} | 0 ...sub-beijingPrisma05_space-other_T2w_label-discs_dlabel.nii.gz} | 0 ...json => sub-beijingPrisma05_rec-average_dwi_label-SC_seg.json} | 0 ...gz => sub-beijingPrisma05_rec-average_dwi_label-SC_seg.nii.gz} | 0 ....json => sub-beijingVerio01_space-other_T1w_label-SC_seg.json} | 0 ....gz => sub-beijingVerio01_space-other_T1w_label-SC_seg.nii.gz} | 0 ...=> sub-beijingVerio01_space-other_T1w_label-discs_dlabel.json} | 0 ... sub-beijingVerio01_space-other_T1w_label-discs_dlabel.nii.gz} | 0 ...on => sub-beijingVerio01_space-other_T2star_label-SC_seg.json} | 0 ... => sub-beijingVerio01_space-other_T2star_label-SC_seg.nii.gz} | 0 ....json => sub-beijingVerio01_space-other_T2w_label-SC_seg.json} | 0 ....gz => sub-beijingVerio01_space-other_T2w_label-SC_seg.nii.gz} | 0 ...=> sub-beijingVerio01_space-other_T2w_label-discs_dlabel.json} | 0 ... sub-beijingVerio01_space-other_T2w_label-discs_dlabel.nii.gz} | 0 ....json => sub-beijingVerio02_space-other_T1w_label-SC_seg.json} | 0 ....gz => sub-beijingVerio02_space-other_T1w_label-SC_seg.nii.gz} | 0 ...=> sub-beijingVerio02_space-other_T1w_label-discs_dlabel.json} | 0 ... sub-beijingVerio02_space-other_T1w_label-discs_dlabel.nii.gz} | 0 ...on => sub-beijingVerio02_space-other_T2star_label-SC_seg.json} | 0 ... => sub-beijingVerio02_space-other_T2star_label-SC_seg.nii.gz} | 0 ....json => sub-beijingVerio02_space-other_T2w_label-SC_seg.json} | 0 ....gz => sub-beijingVerio02_space-other_T2w_label-SC_seg.nii.gz} | 0 ...=> sub-beijingVerio02_space-other_T2w_label-discs_dlabel.json} | 0 ... sub-beijingVerio02_space-other_T2w_label-discs_dlabel.nii.gz} | 0 ....json => sub-beijingVerio02_rec-average_dwi_label-SC_seg.json} | 0 ....gz => sub-beijingVerio02_rec-average_dwi_label-SC_seg.nii.gz} | 0 ....json => sub-beijingVerio03_space-other_T1w_label-SC_seg.json} | 0 ....gz => sub-beijingVerio03_space-other_T1w_label-SC_seg.nii.gz} | 0 ...=> sub-beijingVerio03_space-other_T1w_label-discs_dlabel.json} | 0 ... sub-beijingVerio03_space-other_T1w_label-discs_dlabel.nii.gz} | 0 ...on => sub-beijingVerio03_space-other_T2star_label-SC_seg.json} | 0 ... => sub-beijingVerio03_space-other_T2star_label-SC_seg.nii.gz} | 0 ....json => sub-beijingVerio03_space-other_T2w_label-SC_seg.json} | 0 ....gz => sub-beijingVerio03_space-other_T2w_label-SC_seg.nii.gz} | 0 ...=> sub-beijingVerio03_space-other_T2w_label-discs_dlabel.json} | 0 ... sub-beijingVerio03_space-other_T2w_label-discs_dlabel.nii.gz} | 0 ....json => sub-beijingVerio03_rec-average_dwi_label-SC_seg.json} | 0 ....gz => sub-beijingVerio03_rec-average_dwi_label-SC_seg.nii.gz} | 0 ....json => sub-beijingVerio04_space-other_T1w_label-SC_seg.json} | 0 ....gz => sub-beijingVerio04_space-other_T1w_label-SC_seg.nii.gz} | 0 ...=> sub-beijingVerio04_space-other_T1w_label-discs_dlabel.json} | 0 ... sub-beijingVerio04_space-other_T1w_label-discs_dlabel.nii.gz} | 0 ...on => sub-beijingVerio04_space-other_T2star_label-SC_seg.json} | 0 ... => sub-beijingVerio04_space-other_T2star_label-SC_seg.nii.gz} | 0 ....json => sub-beijingVerio04_space-other_T2w_label-SC_seg.json} | 0 ....gz => sub-beijingVerio04_space-other_T2w_label-SC_seg.nii.gz} | 0 ...=> sub-beijingVerio04_space-other_T2w_label-discs_dlabel.json} | 0 ... sub-beijingVerio04_space-other_T2w_label-discs_dlabel.nii.gz} | 0 ....json => sub-beijingVerio04_rec-average_dwi_label-SC_seg.json} | 0 ....gz => sub-beijingVerio04_rec-average_dwi_label-SC_seg.nii.gz} | 0 ...b-brnoCeitec01_flip-1_mt-on_space-other_MTS_label-SC_seg.json} | 0 ...brnoCeitec01_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} | 0 ...-brnoCeitec01_flip-2_mt-off_space-other_MTS_label-SC_seg.json} | 0 ...rnoCeitec01_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} | 0 ...al.json => sub-brnoCeitec01_space-other_T1w_label-SC_seg.json} | 0 ...ii.gz => sub-brnoCeitec01_space-other_T1w_label-SC_seg.nii.gz} | 0 ...n => sub-brnoCeitec01_space-other_T1w_label-discs_dlabel.json} | 0 ...=> sub-brnoCeitec01_space-other_T1w_label-discs_dlabel.nii.gz} | 0 ...json => sub-brnoCeitec01_space-other_T2star_label-SC_seg.json} | 0 ...gz => sub-brnoCeitec01_space-other_T2star_label-SC_seg.nii.gz} | 0 ...al.json => sub-brnoCeitec01_space-other_T2w_label-SC_seg.json} | 0 ...ii.gz => sub-brnoCeitec01_space-other_T2w_label-SC_seg.nii.gz} | 0 ...n => sub-brnoCeitec01_space-other_T2w_label-discs_dlabel.json} | 0 ...=> sub-brnoCeitec01_space-other_T2w_label-discs_dlabel.nii.gz} | 0 ...al.json => sub-brnoCeitec01_rec-average_dwi_label-SC_seg.json} | 0 ...ii.gz => sub-brnoCeitec01_rec-average_dwi_label-SC_seg.nii.gz} | 0 ...b-brnoCeitec02_flip-1_mt-on_space-other_MTS_label-SC_seg.json} | 0 ...brnoCeitec02_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} | 0 ...-brnoCeitec02_flip-2_mt-off_space-other_MTS_label-SC_seg.json} | 0 ...rnoCeitec02_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} | 0 ...al.json => sub-brnoCeitec02_space-other_T1w_label-SC_seg.json} | 0 ...ii.gz => sub-brnoCeitec02_space-other_T1w_label-SC_seg.nii.gz} | 0 ...n => sub-brnoCeitec02_space-other_T1w_label-discs_dlabel.json} | 0 ...=> sub-brnoCeitec02_space-other_T1w_label-discs_dlabel.nii.gz} | 0 ...json => sub-brnoCeitec02_space-other_T2star_label-SC_seg.json} | 0 ...gz => sub-brnoCeitec02_space-other_T2star_label-SC_seg.nii.gz} | 0 ...al.json => sub-brnoCeitec02_space-other_T2w_label-SC_seg.json} | 0 ...ii.gz => sub-brnoCeitec02_space-other_T2w_label-SC_seg.nii.gz} | 0 ...n => sub-brnoCeitec02_space-other_T2w_label-discs_dlabel.json} | 0 ...=> sub-brnoCeitec02_space-other_T2w_label-discs_dlabel.nii.gz} | 0 ...al.json => sub-brnoCeitec02_rec-average_dwi_label-SC_seg.json} | 0 ...ii.gz => sub-brnoCeitec02_rec-average_dwi_label-SC_seg.nii.gz} | 0 ...b-brnoCeitec03_flip-1_mt-on_space-other_MTS_label-SC_seg.json} | 0 ...brnoCeitec03_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} | 0 ...-brnoCeitec03_flip-2_mt-off_space-other_MTS_label-SC_seg.json} | 0 ...rnoCeitec03_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} | 0 ...al.json => sub-brnoCeitec03_space-other_T1w_label-SC_seg.json} | 0 ...ii.gz => sub-brnoCeitec03_space-other_T1w_label-SC_seg.nii.gz} | 0 ...n => sub-brnoCeitec03_space-other_T1w_label-discs_dlabel.json} | 0 ...=> sub-brnoCeitec03_space-other_T1w_label-discs_dlabel.nii.gz} | 0 ...json => sub-brnoCeitec03_space-other_T2star_label-SC_seg.json} | 0 ...gz => sub-brnoCeitec03_space-other_T2star_label-SC_seg.nii.gz} | 0 ...al.json => sub-brnoCeitec03_space-other_T2w_label-SC_seg.json} | 0 ...ii.gz => sub-brnoCeitec03_space-other_T2w_label-SC_seg.nii.gz} | 0 ...n => sub-brnoCeitec03_space-other_T2w_label-discs_dlabel.json} | 0 ...=> sub-brnoCeitec03_space-other_T2w_label-discs_dlabel.nii.gz} | 0 ...al.json => sub-brnoCeitec03_rec-average_dwi_label-SC_seg.json} | 0 ...ii.gz => sub-brnoCeitec03_rec-average_dwi_label-SC_seg.nii.gz} | 0 ...b-brnoCeitec04_flip-1_mt-on_space-other_MTS_label-SC_seg.json} | 0 ...brnoCeitec04_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} | 0 ...-brnoCeitec04_flip-2_mt-off_space-other_MTS_label-SC_seg.json} | 0 ...rnoCeitec04_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} | 0 ...al.json => sub-brnoCeitec04_space-other_T1w_label-SC_seg.json} | 0 ...ii.gz => sub-brnoCeitec04_space-other_T1w_label-SC_seg.nii.gz} | 0 ...n => sub-brnoCeitec04_space-other_T1w_label-discs_dlabel.json} | 0 ...=> sub-brnoCeitec04_space-other_T1w_label-discs_dlabel.nii.gz} | 0 ...json => sub-brnoCeitec04_space-other_T2star_label-SC_seg.json} | 0 ...gz => sub-brnoCeitec04_space-other_T2star_label-SC_seg.nii.gz} | 0 ...al.json => sub-brnoCeitec04_space-other_T2w_label-SC_seg.json} | 0 ...ii.gz => sub-brnoCeitec04_space-other_T2w_label-SC_seg.nii.gz} | 0 ...n => sub-brnoCeitec04_space-other_T2w_label-discs_dlabel.json} | 0 ...=> sub-brnoCeitec04_space-other_T2w_label-discs_dlabel.nii.gz} | 0 ...al.json => sub-brnoCeitec04_rec-average_dwi_label-SC_seg.json} | 0 ...ii.gz => sub-brnoCeitec04_rec-average_dwi_label-SC_seg.nii.gz} | 0 ...b-brnoCeitec05_flip-1_mt-on_space-other_MTS_label-SC_seg.json} | 0 ...brnoCeitec05_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} | 0 ...-brnoCeitec05_flip-2_mt-off_space-other_MTS_label-SC_seg.json} | 0 ...rnoCeitec05_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} | 0 ...al.json => sub-brnoCeitec05_space-other_T1w_label-SC_seg.json} | 0 ...ii.gz => sub-brnoCeitec05_space-other_T1w_label-SC_seg.nii.gz} | 0 ...n => sub-brnoCeitec05_space-other_T1w_label-discs_dlabel.json} | 0 ...=> sub-brnoCeitec05_space-other_T1w_label-discs_dlabel.nii.gz} | 0 ...json => sub-brnoCeitec05_space-other_T2star_label-SC_seg.json} | 0 ...gz => sub-brnoCeitec05_space-other_T2star_label-SC_seg.nii.gz} | 0 ...al.json => sub-brnoCeitec05_space-other_T2w_label-SC_seg.json} | 0 ...ii.gz => sub-brnoCeitec05_space-other_T2w_label-SC_seg.nii.gz} | 0 ...n => sub-brnoCeitec05_space-other_T2w_label-discs_dlabel.json} | 0 ...=> sub-brnoCeitec05_space-other_T2w_label-discs_dlabel.nii.gz} | 0 ...al.json => sub-brnoCeitec05_rec-average_dwi_label-SC_seg.json} | 0 ...ii.gz => sub-brnoCeitec05_rec-average_dwi_label-SC_seg.nii.gz} | 0 ...b-brnoCeitec06_flip-1_mt-on_space-other_MTS_label-SC_seg.json} | 0 ...brnoCeitec06_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} | 0 ...-brnoCeitec06_flip-2_mt-off_space-other_MTS_label-SC_seg.json} | 0 ...rnoCeitec06_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} | 0 ...al.json => sub-brnoCeitec06_space-other_T1w_label-SC_seg.json} | 0 ...ii.gz => sub-brnoCeitec06_space-other_T1w_label-SC_seg.nii.gz} | 0 ...n => sub-brnoCeitec06_space-other_T1w_label-discs_dlabel.json} | 0 ...=> sub-brnoCeitec06_space-other_T1w_label-discs_dlabel.nii.gz} | 0 ...json => sub-brnoCeitec06_space-other_T2star_label-SC_seg.json} | 0 ...gz => sub-brnoCeitec06_space-other_T2star_label-SC_seg.nii.gz} | 0 ...al.json => sub-brnoCeitec06_space-other_T2w_label-SC_seg.json} | 0 ...ii.gz => sub-brnoCeitec06_space-other_T2w_label-SC_seg.nii.gz} | 0 ...n => sub-brnoCeitec06_space-other_T2w_label-discs_dlabel.json} | 0 ...=> sub-brnoCeitec06_space-other_T2w_label-discs_dlabel.nii.gz} | 0 ...al.json => sub-brnoCeitec06_rec-average_dwi_label-SC_seg.json} | 0 ...ii.gz => sub-brnoCeitec06_rec-average_dwi_label-SC_seg.nii.gz} | 0 ... sub-brnoUhb01_flip-1_mt-on_space-other_MTS_label-SC_seg.json} | 0 ...ub-brnoUhb01_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} | 0 ...sub-brnoUhb01_flip-2_mt-off_space-other_MTS_label-SC_seg.json} | 0 ...b-brnoUhb01_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} | 0 ...anual.json => sub-brnoUhb01_space-other_T1w_label-SC_seg.json} | 0 ...l.nii.gz => sub-brnoUhb01_space-other_T1w_label-SC_seg.nii.gz} | 0 ...json => sub-brnoUhb01_space-other_T1w_label-discs_dlabel.json} | 0 ...gz => sub-brnoUhb01_space-other_T1w_label-discs_dlabel.nii.gz} | 0 ...al.json => sub-brnoUhb01_space-other_T2star_label-SC_seg.json} | 0 ...ii.gz => sub-brnoUhb01_space-other_T2star_label-SC_seg.nii.gz} | 0 ...anual.json => sub-brnoUhb01_space-other_T2w_label-SC_seg.json} | 0 ...l.nii.gz => sub-brnoUhb01_space-other_T2w_label-SC_seg.nii.gz} | 0 ...json => sub-brnoUhb01_space-other_T2w_label-discs_dlabel.json} | 0 ...gz => sub-brnoUhb01_space-other_T2w_label-discs_dlabel.nii.gz} | 0 ...anual.json => sub-brnoUhb01_rec-average_dwi_label-SC_seg.json} | 0 ...l.nii.gz => sub-brnoUhb01_rec-average_dwi_label-SC_seg.nii.gz} | 0 ... sub-brnoUhb02_flip-1_mt-on_space-other_MTS_label-SC_seg.json} | 0 ...ub-brnoUhb02_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} | 0 ...sub-brnoUhb02_flip-2_mt-off_space-other_MTS_label-SC_seg.json} | 0 ...b-brnoUhb02_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} | 0 ...anual.json => sub-brnoUhb02_space-other_T1w_label-SC_seg.json} | 0 ...l.nii.gz => sub-brnoUhb02_space-other_T1w_label-SC_seg.nii.gz} | 0 ...json => sub-brnoUhb02_space-other_T1w_label-discs_dlabel.json} | 0 ...gz => sub-brnoUhb02_space-other_T1w_label-discs_dlabel.nii.gz} | 0 ...al.json => sub-brnoUhb02_space-other_T2star_label-SC_seg.json} | 0 ...ii.gz => 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sub-cmrra01_space-other_T2w_label-SC_seg.nii.gz} | 0 ...l.json => sub-cmrra01_space-other_T2w_label-discs_dlabel.json} | 0 ...i.gz => sub-cmrra01_space-other_T2w_label-discs_dlabel.nii.gz} | 0 ...-manual.json => sub-cmrra01_rec-average_dwi_label-SC_seg.json} | 0 ...ual.nii.gz => sub-cmrra01_rec-average_dwi_label-SC_seg.nii.gz} | 0 ...=> sub-cmrra02_flip-1_mt-on_space-other_MTS_label-SC_seg.json} | 0 ... sub-cmrra02_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} | 0 ...> sub-cmrra02_flip-2_mt-off_space-other_MTS_label-SC_seg.json} | 0 ...sub-cmrra02_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} | 0 ...-manual.json => sub-cmrra02_space-other_T1w_label-SC_seg.json} | 0 ...ual.nii.gz => sub-cmrra02_space-other_T1w_label-SC_seg.nii.gz} | 0 ...l.json => sub-cmrra02_space-other_T1w_label-discs_dlabel.json} | 0 ...i.gz => sub-cmrra02_space-other_T1w_label-discs_dlabel.nii.gz} | 0 ...nual.json => sub-cmrra02_space-other_T2star_label-SC_seg.json} | 0 ....nii.gz => sub-cmrra02_space-other_T2star_label-SC_seg.nii.gz} | 0 ...-manual.json => sub-cmrra02_space-other_T2w_label-SC_seg.json} | 0 ...ual.nii.gz => sub-cmrra02_space-other_T2w_label-SC_seg.nii.gz} | 0 ...l.json => sub-cmrra02_space-other_T2w_label-discs_dlabel.json} | 0 ...i.gz => sub-cmrra02_space-other_T2w_label-discs_dlabel.nii.gz} | 0 ...-manual.json => sub-cmrra02_rec-average_dwi_label-SC_seg.json} | 0 ...ual.nii.gz => sub-cmrra02_rec-average_dwi_label-SC_seg.nii.gz} | 0 ...=> sub-cmrra03_flip-1_mt-on_space-other_MTS_label-SC_seg.json} | 0 ... sub-cmrra03_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} | 0 ...> sub-cmrra03_flip-2_mt-off_space-other_MTS_label-SC_seg.json} | 0 ...sub-cmrra03_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} | 0 ...-manual.json => sub-cmrra03_space-other_T1w_label-SC_seg.json} | 0 ...ual.nii.gz => sub-cmrra03_space-other_T1w_label-SC_seg.nii.gz} | 0 ...l.json => sub-cmrra03_space-other_T1w_label-discs_dlabel.json} | 0 ...i.gz => sub-cmrra03_space-other_T1w_label-discs_dlabel.nii.gz} | 0 ...nual.json => sub-cmrra03_space-other_T2star_label-SC_seg.json} | 0 ....nii.gz => sub-cmrra03_space-other_T2star_label-SC_seg.nii.gz} | 0 ...-manual.json => sub-cmrra03_space-other_T2w_label-SC_seg.json} | 0 ...ual.nii.gz => sub-cmrra03_space-other_T2w_label-SC_seg.nii.gz} | 0 ...l.json => sub-cmrra03_space-other_T2w_label-discs_dlabel.json} | 0 ...i.gz => sub-cmrra03_space-other_T2w_label-discs_dlabel.nii.gz} | 0 ...-manual.json => sub-cmrra03_rec-average_dwi_label-SC_seg.json} | 0 ...ual.nii.gz => sub-cmrra03_rec-average_dwi_label-SC_seg.nii.gz} | 0 ...=> sub-cmrra04_flip-1_mt-on_space-other_MTS_label-SC_seg.json} | 0 ... sub-cmrra04_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} | 0 ...> sub-cmrra04_flip-2_mt-off_space-other_MTS_label-SC_seg.json} | 0 ...sub-cmrra04_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} | 0 ...-manual.json => sub-cmrra04_space-other_T1w_label-SC_seg.json} | 0 ...ual.nii.gz => sub-cmrra04_space-other_T1w_label-SC_seg.nii.gz} | 0 ...l.json => sub-cmrra04_space-other_T1w_label-discs_dlabel.json} | 0 ...i.gz => sub-cmrra04_space-other_T1w_label-discs_dlabel.nii.gz} | 0 ...nual.json => sub-cmrra04_space-other_T2star_label-SC_seg.json} | 0 ....nii.gz => sub-cmrra04_space-other_T2star_label-SC_seg.nii.gz} | 0 ...-manual.json => sub-cmrra04_space-other_T2w_label-SC_seg.json} | 0 ...ual.nii.gz => sub-cmrra04_space-other_T2w_label-SC_seg.nii.gz} | 0 ...l.json => sub-cmrra04_space-other_T2w_label-discs_dlabel.json} | 0 ...i.gz => sub-cmrra04_space-other_T2w_label-discs_dlabel.nii.gz} | 0 ...-manual.json => sub-cmrra04_rec-average_dwi_label-SC_seg.json} | 0 ...ual.nii.gz => sub-cmrra04_rec-average_dwi_label-SC_seg.nii.gz} | 0 ...=> sub-cmrra05_flip-1_mt-on_space-other_MTS_label-SC_seg.json} | 0 ... sub-cmrra05_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} | 0 ...> sub-cmrra05_flip-2_mt-off_space-other_MTS_label-SC_seg.json} | 0 ...sub-cmrra05_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} | 0 ...-manual.json => sub-cmrra05_space-other_T1w_label-SC_seg.json} | 0 ...ual.nii.gz => sub-cmrra05_space-other_T1w_label-SC_seg.nii.gz} | 0 ...l.json => sub-cmrra05_space-other_T1w_label-discs_dlabel.json} | 0 ...i.gz => sub-cmrra05_space-other_T1w_label-discs_dlabel.nii.gz} | 0 ...nual.json => sub-cmrra05_space-other_T2star_label-SC_seg.json} | 0 ....nii.gz => sub-cmrra05_space-other_T2star_label-SC_seg.nii.gz} | 0 ...-manual.json => sub-cmrra05_space-other_T2w_label-SC_seg.json} | 0 ...ual.nii.gz => sub-cmrra05_space-other_T2w_label-SC_seg.nii.gz} | 0 ...l.json => sub-cmrra05_space-other_T2w_label-discs_dlabel.json} | 0 ...i.gz => sub-cmrra05_space-other_T2w_label-discs_dlabel.nii.gz} | 0 ...-manual.json => sub-cmrra05_rec-average_dwi_label-SC_seg.json} | 0 ...ual.nii.gz => sub-cmrra05_rec-average_dwi_label-SC_seg.nii.gz} | 0 ...=> sub-cmrra06_flip-1_mt-on_space-other_MTS_label-SC_seg.json} | 0 ... sub-cmrra06_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} | 0 ...> sub-cmrra06_flip-2_mt-off_space-other_MTS_label-SC_seg.json} | 0 ...sub-cmrra06_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} | 0 ...-manual.json => sub-cmrra06_space-other_T1w_label-SC_seg.json} | 0 ...ual.nii.gz => sub-cmrra06_space-other_T1w_label-SC_seg.nii.gz} | 0 ...l.json => sub-cmrra06_space-other_T1w_label-discs_dlabel.json} | 0 ...i.gz => sub-cmrra06_space-other_T1w_label-discs_dlabel.nii.gz} | 0 ...nual.json => sub-cmrra06_space-other_T2star_label-SC_seg.json} | 0 ....nii.gz => sub-cmrra06_space-other_T2star_label-SC_seg.nii.gz} | 0 ...-manual.json => sub-cmrra06_space-other_T2w_label-SC_seg.json} | 0 ...ual.nii.gz => sub-cmrra06_space-other_T2w_label-SC_seg.nii.gz} | 0 ...l.json => sub-cmrra06_space-other_T2w_label-discs_dlabel.json} | 0 ...i.gz => sub-cmrra06_space-other_T2w_label-discs_dlabel.nii.gz} | 0 ...-manual.json => sub-cmrra06_rec-average_dwi_label-SC_seg.json} | 0 ...ual.nii.gz => sub-cmrra06_rec-average_dwi_label-SC_seg.nii.gz} | 0 ...=> sub-cmrrb01_flip-1_mt-on_space-other_MTS_label-SC_seg.json} | 0 ... sub-cmrrb01_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} | 0 ...> sub-cmrrb01_flip-2_mt-off_space-other_MTS_label-SC_seg.json} | 0 ...sub-cmrrb01_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} | 0 ...-manual.json => sub-cmrrb01_space-other_T1w_label-SC_seg.json} | 0 ...ual.nii.gz => sub-cmrrb01_space-other_T1w_label-SC_seg.nii.gz} | 0 ...l.json => sub-cmrrb01_space-other_T1w_label-discs_dlabel.json} | 0 ...i.gz => sub-cmrrb01_space-other_T1w_label-discs_dlabel.nii.gz} | 0 ...nual.json => sub-cmrrb01_space-other_T2star_label-SC_seg.json} | 0 ....nii.gz => sub-cmrrb01_space-other_T2star_label-SC_seg.nii.gz} | 0 ...-manual.json => sub-cmrrb01_space-other_T2w_label-SC_seg.json} | 0 ...ual.nii.gz => sub-cmrrb01_space-other_T2w_label-SC_seg.nii.gz} | 0 ...l.json => sub-cmrrb01_space-other_T2w_label-discs_dlabel.json} | 0 ...i.gz => sub-cmrrb01_space-other_T2w_label-discs_dlabel.nii.gz} | 0 ...-manual.json => sub-cmrrb01_rec-average_dwi_label-SC_seg.json} | 0 ...ual.nii.gz => sub-cmrrb01_rec-average_dwi_label-SC_seg.nii.gz} | 0 ...=> sub-cmrrb02_flip-1_mt-on_space-other_MTS_label-SC_seg.json} | 0 ... sub-cmrrb02_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} | 0 ...> sub-cmrrb02_flip-2_mt-off_space-other_MTS_label-SC_seg.json} | 0 ...sub-cmrrb02_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} | 0 ...-manual.json => sub-cmrrb02_space-other_T1w_label-SC_seg.json} | 0 ...ual.nii.gz => sub-cmrrb02_space-other_T1w_label-SC_seg.nii.gz} | 0 ...l.json => sub-cmrrb02_space-other_T1w_label-discs_dlabel.json} | 0 ...i.gz => sub-cmrrb02_space-other_T1w_label-discs_dlabel.nii.gz} | 0 ...nual.json => sub-cmrrb02_space-other_T2star_label-SC_seg.json} | 0 ....nii.gz => sub-cmrrb02_space-other_T2star_label-SC_seg.nii.gz} | 0 ...-manual.json => sub-cmrrb02_space-other_T2w_label-SC_seg.json} | 0 ...ual.nii.gz => sub-cmrrb02_space-other_T2w_label-SC_seg.nii.gz} | 0 ...l.json => sub-cmrrb02_space-other_T2w_label-discs_dlabel.json} | 0 ...i.gz => sub-cmrrb02_space-other_T2w_label-discs_dlabel.nii.gz} | 0 ...-manual.json => sub-cmrrb02_rec-average_dwi_label-SC_seg.json} | 0 ...ual.nii.gz => sub-cmrrb02_rec-average_dwi_label-SC_seg.nii.gz} | 0 ...=> sub-cmrrb03_flip-1_mt-on_space-other_MTS_label-SC_seg.json} | 0 ... sub-cmrrb03_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} | 0 ...> sub-cmrrb03_flip-2_mt-off_space-other_MTS_label-SC_seg.json} | 0 ...sub-cmrrb03_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} | 0 ...-manual.json => sub-cmrrb03_space-other_T1w_label-SC_seg.json} | 0 ...ual.nii.gz => sub-cmrrb03_space-other_T1w_label-SC_seg.nii.gz} | 0 ...l.json => sub-cmrrb03_space-other_T1w_label-discs_dlabel.json} | 0 ...i.gz => sub-cmrrb03_space-other_T1w_label-discs_dlabel.nii.gz} | 0 ...nual.json => sub-cmrrb03_space-other_T2star_label-SC_seg.json} | 0 ....nii.gz => sub-cmrrb03_space-other_T2star_label-SC_seg.nii.gz} | 0 ...nual.json => sub-cmrrb03_space-other_T2w_csflabel-SC_seg.json} | 0 ....nii.gz => sub-cmrrb03_space-other_T2w_csflabel-SC_seg.nii.gz} | 0 ...-manual.json => sub-cmrrb03_space-other_T2w_label-SC_seg.json} | 0 ...ual.nii.gz => sub-cmrrb03_space-other_T2w_label-SC_seg.nii.gz} | 0 ...l.json => sub-cmrrb03_space-other_T2w_label-discs_dlabel.json} | 0 ...i.gz => sub-cmrrb03_space-other_T2w_label-discs_dlabel.nii.gz} | 0 ...-manual.json => sub-cmrrb03_rec-average_dwi_label-SC_seg.json} | 0 ...ual.nii.gz => sub-cmrrb03_rec-average_dwi_label-SC_seg.nii.gz} | 0 ...=> sub-cmrrb04_flip-1_mt-on_space-other_MTS_label-SC_seg.json} | 0 ... sub-cmrrb04_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} | 0 ...> sub-cmrrb04_flip-2_mt-off_space-other_MTS_label-SC_seg.json} | 0 ...sub-cmrrb04_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} | 0 ...-manual.json => sub-cmrrb04_space-other_T1w_label-SC_seg.json} | 0 ...ual.nii.gz => sub-cmrrb04_space-other_T1w_label-SC_seg.nii.gz} | 0 ...l.json => sub-cmrrb04_space-other_T1w_label-discs_dlabel.json} | 0 ...i.gz => sub-cmrrb04_space-other_T1w_label-discs_dlabel.nii.gz} | 0 ...nual.json => sub-cmrrb04_space-other_T2star_label-SC_seg.json} | 0 ....nii.gz => sub-cmrrb04_space-other_T2star_label-SC_seg.nii.gz} | 0 ...-manual.json => sub-cmrrb04_space-other_T2w_label-SC_seg.json} | 0 ...ual.nii.gz => sub-cmrrb04_space-other_T2w_label-SC_seg.nii.gz} | 0 ...l.json => sub-cmrrb04_space-other_T2w_label-discs_dlabel.json} | 0 ...i.gz => sub-cmrrb04_space-other_T2w_label-discs_dlabel.nii.gz} | 0 ...-manual.json => sub-cmrrb04_rec-average_dwi_label-SC_seg.json} | 0 ...ual.nii.gz => sub-cmrrb04_rec-average_dwi_label-SC_seg.nii.gz} | 0 ...=> sub-cmrrb05_flip-1_mt-on_space-other_MTS_label-SC_seg.json} | 0 ... sub-cmrrb05_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} | 0 ...> sub-cmrrb05_flip-2_mt-off_space-other_MTS_label-SC_seg.json} | 0 ...sub-cmrrb05_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} | 0 ...-manual.json => sub-cmrrb05_space-other_T1w_label-SC_seg.json} | 0 ...ual.nii.gz => sub-cmrrb05_space-other_T1w_label-SC_seg.nii.gz} | 0 ...l.json => sub-cmrrb05_space-other_T1w_label-discs_dlabel.json} | 0 ...i.gz => sub-cmrrb05_space-other_T1w_label-discs_dlabel.nii.gz} | 0 ...nual.json => sub-cmrrb05_space-other_T2star_label-SC_seg.json} | 0 ....nii.gz => sub-cmrrb05_space-other_T2star_label-SC_seg.nii.gz} | 0 ...-manual.json => sub-cmrrb05_space-other_T2w_label-SC_seg.json} | 0 ...ual.nii.gz => sub-cmrrb05_space-other_T2w_label-SC_seg.nii.gz} | 0 ...l.json => sub-cmrrb05_space-other_T2w_label-discs_dlabel.json} | 0 ...i.gz => sub-cmrrb05_space-other_T2w_label-discs_dlabel.nii.gz} | 0 ...-manual.json => sub-cmrrb05_rec-average_dwi_label-SC_seg.json} | 0 ...ual.nii.gz => sub-cmrrb05_rec-average_dwi_label-SC_seg.nii.gz} | 0 ...=> sub-cmrrb06_flip-1_mt-on_space-other_MTS_label-SC_seg.json} | 0 ... sub-cmrrb06_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} | 0 ...> sub-cmrrb06_flip-2_mt-off_space-other_MTS_label-SC_seg.json} | 0 ...sub-cmrrb06_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} | 0 ...-manual.json => sub-cmrrb06_space-other_T1w_label-SC_seg.json} | 0 ...ual.nii.gz => sub-cmrrb06_space-other_T1w_label-SC_seg.nii.gz} | 0 ...l.json => sub-cmrrb06_space-other_T1w_label-discs_dlabel.json} | 0 ...i.gz => sub-cmrrb06_space-other_T1w_label-discs_dlabel.nii.gz} | 0 ...nual.json => sub-cmrrb06_space-other_T2star_label-SC_seg.json} | 0 ....nii.gz => sub-cmrrb06_space-other_T2star_label-SC_seg.nii.gz} | 0 ...-manual.json => sub-cmrrb06_space-other_T2w_label-SC_seg.json} | 0 ...ual.nii.gz => sub-cmrrb06_space-other_T2w_label-SC_seg.nii.gz} | 0 ...l.json => sub-cmrrb06_space-other_T2w_label-discs_dlabel.json} | 0 ...i.gz => sub-cmrrb06_space-other_T2w_label-discs_dlabel.nii.gz} | 0 ...-manual.json => sub-cmrrb06_rec-average_dwi_label-SC_seg.json} | 0 ...ual.nii.gz => sub-cmrrb06_rec-average_dwi_label-SC_seg.nii.gz} | 0 ...=> sub-cmrrb07_flip-1_mt-on_space-other_MTS_label-SC_seg.json} | 0 ... sub-cmrrb07_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} | 0 ...> sub-cmrrb07_flip-2_mt-off_space-other_MTS_label-SC_seg.json} | 0 ...sub-cmrrb07_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} | 0 ...-manual.json => sub-cmrrb07_space-other_T1w_label-SC_seg.json} | 0 ...ual.nii.gz => sub-cmrrb07_space-other_T1w_label-SC_seg.nii.gz} | 0 ...l.json => sub-cmrrb07_space-other_T1w_label-discs_dlabel.json} | 0 ...i.gz => sub-cmrrb07_space-other_T1w_label-discs_dlabel.nii.gz} | 0 ...nual.json => sub-cmrrb07_space-other_T2star_label-SC_seg.json} | 0 ....nii.gz => sub-cmrrb07_space-other_T2star_label-SC_seg.nii.gz} | 0 ...-manual.json => sub-cmrrb07_space-other_T2w_label-SC_seg.json} | 0 ...ual.nii.gz => sub-cmrrb07_space-other_T2w_label-SC_seg.nii.gz} | 0 ...l.json => sub-cmrrb07_space-other_T2w_label-discs_dlabel.json} | 0 ...i.gz => sub-cmrrb07_space-other_T2w_label-discs_dlabel.nii.gz} | 0 ...-manual.json => sub-cmrrb07_rec-average_dwi_label-SC_seg.json} | 0 ...ual.nii.gz => sub-cmrrb07_rec-average_dwi_label-SC_seg.nii.gz} | 0 ... sub-dresden01_flip-1_mt-on_space-other_MTS_label-SC_seg.json} | 0 ...ub-dresden01_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} | 0 ...sub-dresden01_flip-2_mt-off_space-other_MTS_label-SC_seg.json} | 0 ...b-dresden01_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} | 0 ...anual.json => sub-dresden01_space-other_T1w_label-SC_seg.json} | 0 ...l.nii.gz => sub-dresden01_space-other_T1w_label-SC_seg.nii.gz} | 0 ...json => sub-dresden01_space-other_T1w_label-discs_dlabel.json} | 0 ...gz => sub-dresden01_space-other_T1w_label-discs_dlabel.nii.gz} | 0 ...al.json => sub-dresden01_space-other_T2star_label-SC_seg.json} | 0 ...ii.gz => sub-dresden01_space-other_T2star_label-SC_seg.nii.gz} | 0 ...anual.json => sub-dresden01_space-other_T2w_label-SC_seg.json} | 0 ...l.nii.gz => 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sub-geneva02_space-other_T1w_label-SC_seg.nii.gz} | 0 ....json => sub-geneva02_space-other_T1w_label-discs_dlabel.json} | 0 ....gz => sub-geneva02_space-other_T1w_label-discs_dlabel.nii.gz} | 0 ...ual.json => sub-geneva02_space-other_T2star_label-SC_seg.json} | 0 ...nii.gz => sub-geneva02_space-other_T2star_label-SC_seg.nii.gz} | 0 ...manual.json => sub-geneva02_space-other_T2w_label-SC_seg.json} | 0 ...al.nii.gz => sub-geneva02_space-other_T2w_label-SC_seg.nii.gz} | 0 ....json => sub-geneva02_space-other_T2w_label-discs_dlabel.json} | 0 ....gz => sub-geneva02_space-other_T2w_label-discs_dlabel.nii.gz} | 0 ...manual.json => sub-geneva02_rec-average_dwi_label-SC_seg.json} | 0 ...al.nii.gz => sub-geneva02_rec-average_dwi_label-SC_seg.nii.gz} | 0 ...> sub-geneva03_flip-1_mt-on_space-other_MTS_label-SC_seg.json} | 0 ...sub-geneva03_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} | 0 ... sub-geneva03_flip-2_mt-off_space-other_MTS_label-SC_seg.json} | 0 ...ub-geneva03_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} | 0 ...manual.json => sub-geneva03_space-other_T1w_label-SC_seg.json} | 0 ...al.nii.gz => sub-geneva03_space-other_T1w_label-SC_seg.nii.gz} | 0 ....json => sub-geneva03_space-other_T1w_label-discs_dlabel.json} | 0 ....gz => sub-geneva03_space-other_T1w_label-discs_dlabel.nii.gz} | 0 ...ual.json => sub-geneva03_space-other_T2star_label-SC_seg.json} | 0 ...nii.gz => sub-geneva03_space-other_T2star_label-SC_seg.nii.gz} | 0 ...manual.json => sub-geneva03_space-other_T2w_label-SC_seg.json} | 0 ...al.nii.gz => sub-geneva03_space-other_T2w_label-SC_seg.nii.gz} | 0 ....json => sub-geneva03_space-other_T2w_label-discs_dlabel.json} | 0 ....gz => sub-geneva03_space-other_T2w_label-discs_dlabel.nii.gz} | 0 ...manual.json => sub-geneva03_rec-average_dwi_label-SC_seg.json} | 0 ...al.nii.gz => sub-geneva03_rec-average_dwi_label-SC_seg.nii.gz} | 0 ...> sub-geneva04_flip-1_mt-on_space-other_MTS_label-SC_seg.json} | 0 ...sub-geneva04_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} | 0 ... sub-geneva04_flip-2_mt-off_space-other_MTS_label-SC_seg.json} | 0 ...ub-geneva04_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} | 0 ...manual.json => sub-geneva04_space-other_T1w_label-SC_seg.json} | 0 ...al.nii.gz => sub-geneva04_space-other_T1w_label-SC_seg.nii.gz} | 0 ....json => sub-geneva04_space-other_T1w_label-discs_dlabel.json} | 0 ....gz => sub-geneva04_space-other_T1w_label-discs_dlabel.nii.gz} | 0 ...ual.json => sub-geneva04_space-other_T2star_label-SC_seg.json} | 0 ...nii.gz => sub-geneva04_space-other_T2star_label-SC_seg.nii.gz} | 0 ...ual.json => sub-geneva04_space-other_T2w_csflabel-SC_seg.json} | 0 ...nii.gz => sub-geneva04_space-other_T2w_csflabel-SC_seg.nii.gz} | 0 ...manual.json => sub-geneva04_space-other_T2w_label-SC_seg.json} | 0 ...al.nii.gz => sub-geneva04_space-other_T2w_label-SC_seg.nii.gz} | 0 ....json => sub-geneva04_space-other_T2w_label-discs_dlabel.json} | 0 ....gz => 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sub-juntendo750w02_space-other_T1w_label-discs_dlabel.nii.gz} | 0 ...on => sub-juntendo750w02_space-other_T2star_label-SC_seg.json} | 0 ... => sub-juntendo750w02_space-other_T2star_label-SC_seg.nii.gz} | 0 ....json => sub-juntendo750w02_space-other_T2w_label-SC_seg.json} | 0 ....gz => sub-juntendo750w02_space-other_T2w_label-SC_seg.nii.gz} | 0 ...=> sub-juntendo750w02_space-other_T2w_label-discs_dlabel.json} | 0 ... sub-juntendo750w02_space-other_T2w_label-discs_dlabel.nii.gz} | 0 ....json => sub-juntendo750w02_rec-average_dwi_label-SC_seg.json} | 0 ....gz => sub-juntendo750w02_rec-average_dwi_label-SC_seg.nii.gz} | 0 ...juntendo750w03_flip-1_mt-on_space-other_MTS_label-SC_seg.json} | 0 ...ntendo750w03_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} | 0 ...untendo750w03_flip-2_mt-off_space-other_MTS_label-SC_seg.json} | 0 ...tendo750w03_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} | 0 ....json => sub-juntendo750w03_space-other_T1w_label-SC_seg.json} | 0 ....gz => sub-juntendo750w03_space-other_T1w_label-SC_seg.nii.gz} | 0 ...=> sub-juntendo750w03_space-other_T1w_label-discs_dlabel.json} | 0 ... sub-juntendo750w03_space-other_T1w_label-discs_dlabel.nii.gz} | 0 ...on => sub-juntendo750w03_space-other_T2star_label-SC_seg.json} | 0 ... => sub-juntendo750w03_space-other_T2star_label-SC_seg.nii.gz} | 0 ....json => sub-juntendo750w03_space-other_T2w_label-SC_seg.json} | 0 ....gz => sub-juntendo750w03_space-other_T2w_label-SC_seg.nii.gz} | 0 ...=> sub-juntendo750w03_space-other_T2w_label-discs_dlabel.json} | 0 ... sub-juntendo750w03_space-other_T2w_label-discs_dlabel.nii.gz} | 0 ....json => sub-juntendo750w03_rec-average_dwi_label-SC_seg.json} | 0 ....gz => sub-juntendo750w03_rec-average_dwi_label-SC_seg.nii.gz} | 0 ...juntendo750w04_flip-1_mt-on_space-other_MTS_label-SC_seg.json} | 0 ...ntendo750w04_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} | 0 ...untendo750w04_flip-2_mt-off_space-other_MTS_label-SC_seg.json} | 0 ...tendo750w04_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} | 0 ....json => sub-juntendo750w04_space-other_T1w_label-SC_seg.json} | 0 ....gz => sub-juntendo750w04_space-other_T1w_label-SC_seg.nii.gz} | 0 ...=> sub-juntendo750w04_space-other_T1w_label-discs_dlabel.json} | 0 ... sub-juntendo750w04_space-other_T1w_label-discs_dlabel.nii.gz} | 0 ...on => sub-juntendo750w04_space-other_T2star_label-SC_seg.json} | 0 ... => sub-juntendo750w04_space-other_T2star_label-SC_seg.nii.gz} | 0 ....json => sub-juntendo750w04_space-other_T2w_label-SC_seg.json} | 0 ....gz => sub-juntendo750w04_space-other_T2w_label-SC_seg.nii.gz} | 0 ...=> sub-juntendo750w04_space-other_T2w_label-discs_dlabel.json} | 0 ... sub-juntendo750w04_space-other_T2w_label-discs_dlabel.nii.gz} | 0 ....json => sub-juntendo750w04_rec-average_dwi_label-SC_seg.json} | 0 ....gz => sub-juntendo750w04_rec-average_dwi_label-SC_seg.nii.gz} | 0 ...juntendo750w05_flip-1_mt-on_space-other_MTS_label-SC_seg.json} | 0 ...ntendo750w05_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} | 0 ...untendo750w05_flip-2_mt-off_space-other_MTS_label-SC_seg.json} | 0 ...tendo750w05_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} | 0 ....json => sub-juntendo750w05_space-other_T1w_label-SC_seg.json} | 0 ....gz => sub-juntendo750w05_space-other_T1w_label-SC_seg.nii.gz} | 0 ...=> sub-juntendo750w05_space-other_T1w_label-discs_dlabel.json} | 0 ... sub-juntendo750w05_space-other_T1w_label-discs_dlabel.nii.gz} | 0 ...on => sub-juntendo750w05_space-other_T2star_label-SC_seg.json} | 0 ... => sub-juntendo750w05_space-other_T2star_label-SC_seg.nii.gz} | 0 ....json => sub-juntendo750w05_space-other_T2w_label-SC_seg.json} | 0 ....gz => sub-juntendo750w05_space-other_T2w_label-SC_seg.nii.gz} | 0 ...=> sub-juntendo750w05_space-other_T2w_label-discs_dlabel.json} | 0 ... sub-juntendo750w05_space-other_T2w_label-discs_dlabel.nii.gz} | 0 ....json => sub-juntendo750w05_rec-average_dwi_label-SC_seg.json} | 0 ....gz => sub-juntendo750w05_rec-average_dwi_label-SC_seg.nii.gz} | 0 ...juntendo750w06_flip-1_mt-on_space-other_MTS_label-SC_seg.json} | 0 ...ntendo750w06_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} | 0 ...untendo750w06_flip-2_mt-off_space-other_MTS_label-SC_seg.json} | 0 ...tendo750w06_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} | 0 ....json => sub-juntendo750w06_space-other_T1w_label-SC_seg.json} | 0 ....gz => sub-juntendo750w06_space-other_T1w_label-SC_seg.nii.gz} | 0 ...=> sub-juntendo750w06_space-other_T1w_label-discs_dlabel.json} | 0 ... sub-juntendo750w06_space-other_T1w_label-discs_dlabel.nii.gz} | 0 ...on => sub-juntendo750w06_space-other_T2star_label-SC_seg.json} | 0 ... => sub-juntendo750w06_space-other_T2star_label-SC_seg.nii.gz} | 0 ....json => sub-juntendo750w06_space-other_T2w_label-SC_seg.json} | 0 ....gz => sub-juntendo750w06_space-other_T2w_label-SC_seg.nii.gz} | 0 ...=> sub-juntendo750w06_space-other_T2w_label-discs_dlabel.json} | 0 ... sub-juntendo750w06_space-other_T2w_label-discs_dlabel.nii.gz} | 0 ....json => sub-juntendo750w06_rec-average_dwi_label-SC_seg.json} | 0 ....gz => sub-juntendo750w06_rec-average_dwi_label-SC_seg.nii.gz} | 0 ...n => sub-mgh01_flip-1_mt-on_space-other_MTS_label-SC_seg.json} | 0 ...=> sub-mgh01_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} | 0 ... => sub-mgh01_flip-2_mt-off_space-other_MTS_label-SC_seg.json} | 0 ...> sub-mgh01_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} | 0 ...eg-manual.json => sub-mgh01_space-other_T1w_label-SC_seg.json} | 0 ...anual.nii.gz => sub-mgh01_space-other_T1w_label-SC_seg.nii.gz} | 0 ...ual.json => sub-mgh01_space-other_T1w_label-discs_dlabel.json} | 0 ...nii.gz => sub-mgh01_space-other_T1w_label-discs_dlabel.nii.gz} | 0 ...manual.json => sub-mgh01_space-other_T2star_label-SC_seg.json} | 0 ...al.nii.gz => sub-mgh01_space-other_T2star_label-SC_seg.nii.gz} | 0 ...eg-manual.json => sub-mgh01_space-other_T2w_label-SC_seg.json} | 0 ...anual.nii.gz => sub-mgh01_space-other_T2w_label-SC_seg.nii.gz} | 0 ...ual.json => sub-mgh01_space-other_T2w_label-discs_dlabel.json} | 0 ...nii.gz => sub-mgh01_space-other_T2w_label-discs_dlabel.nii.gz} | 0 ...eg-manual.json => sub-mgh01_rec-average_dwi_label-SC_seg.json} | 0 ...anual.nii.gz => sub-mgh01_rec-average_dwi_label-SC_seg.nii.gz} | 0 ...n => sub-mgh02_flip-1_mt-on_space-other_MTS_label-SC_seg.json} | 0 ...=> sub-mgh02_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} | 0 ... => sub-mgh02_flip-2_mt-off_space-other_MTS_label-SC_seg.json} | 0 ...> sub-mgh02_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} | 0 ...eg-manual.json => sub-mgh02_space-other_T1w_label-SC_seg.json} | 0 ...anual.nii.gz => sub-mgh02_space-other_T1w_label-SC_seg.nii.gz} | 0 ...ual.json => sub-mgh02_space-other_T1w_label-discs_dlabel.json} | 0 ...nii.gz => sub-mgh02_space-other_T1w_label-discs_dlabel.nii.gz} | 0 ...manual.json => sub-mgh02_space-other_T2star_label-SC_seg.json} | 0 ...al.nii.gz => sub-mgh02_space-other_T2star_label-SC_seg.nii.gz} | 0 ...eg-manual.json => sub-mgh02_space-other_T2w_label-SC_seg.json} | 0 ...anual.nii.gz => sub-mgh02_space-other_T2w_label-SC_seg.nii.gz} | 0 ...ual.json => sub-mgh02_space-other_T2w_label-discs_dlabel.json} | 0 ...nii.gz => sub-mgh02_space-other_T2w_label-discs_dlabel.nii.gz} | 0 ...eg-manual.json => sub-mgh02_rec-average_dwi_label-SC_seg.json} | 0 ...anual.nii.gz => sub-mgh02_rec-average_dwi_label-SC_seg.nii.gz} | 0 ...n => sub-mgh03_flip-1_mt-on_space-other_MTS_label-SC_seg.json} | 0 ...=> sub-mgh03_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} | 0 ... => sub-mgh03_flip-2_mt-off_space-other_MTS_label-SC_seg.json} | 0 ...> sub-mgh03_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} | 0 ...eg-manual.json => sub-mgh03_space-other_T1w_label-SC_seg.json} | 0 ...anual.nii.gz => sub-mgh03_space-other_T1w_label-SC_seg.nii.gz} | 0 ...ual.json => sub-mgh03_space-other_T1w_label-discs_dlabel.json} | 0 ...nii.gz => sub-mgh03_space-other_T1w_label-discs_dlabel.nii.gz} | 0 ...manual.json => sub-mgh03_space-other_T2star_label-SC_seg.json} | 0 ...al.nii.gz => sub-mgh03_space-other_T2star_label-SC_seg.nii.gz} | 0 ...eg-manual.json => sub-mgh03_space-other_T2w_label-SC_seg.json} | 0 ...anual.nii.gz => sub-mgh03_space-other_T2w_label-SC_seg.nii.gz} | 0 ...ual.json => sub-mgh03_space-other_T2w_label-discs_dlabel.json} | 0 ...nii.gz => sub-mgh03_space-other_T2w_label-discs_dlabel.nii.gz} | 0 ...eg-manual.json => sub-mgh03_rec-average_dwi_label-SC_seg.json} | 0 ...anual.nii.gz => sub-mgh03_rec-average_dwi_label-SC_seg.nii.gz} | 0 ...n => sub-mgh04_flip-1_mt-on_space-other_MTS_label-SC_seg.json} | 0 ...=> sub-mgh04_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} | 0 ... => sub-mgh04_flip-2_mt-off_space-other_MTS_label-SC_seg.json} | 0 ...> sub-mgh04_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} | 0 ...eg-manual.json => sub-mgh04_space-other_T1w_label-SC_seg.json} | 0 ...anual.nii.gz => sub-mgh04_space-other_T1w_label-SC_seg.nii.gz} | 0 ...ual.json => sub-mgh04_space-other_T1w_label-discs_dlabel.json} | 0 ...nii.gz => sub-mgh04_space-other_T1w_label-discs_dlabel.nii.gz} | 0 ...manual.json => sub-mgh04_space-other_T2star_label-SC_seg.json} | 0 ...al.nii.gz => sub-mgh04_space-other_T2star_label-SC_seg.nii.gz} | 0 ...eg-manual.json => sub-mgh04_space-other_T2w_label-SC_seg.json} | 0 ...anual.nii.gz => sub-mgh04_space-other_T2w_label-SC_seg.nii.gz} | 0 ...ual.json => sub-mgh04_space-other_T2w_label-discs_dlabel.json} | 0 ...nii.gz => sub-mgh04_space-other_T2w_label-discs_dlabel.nii.gz} | 0 ...eg-manual.json => sub-mgh04_rec-average_dwi_label-SC_seg.json} | 0 ...anual.nii.gz => sub-mgh04_rec-average_dwi_label-SC_seg.nii.gz} | 0 ...n => sub-mgh05_flip-1_mt-on_space-other_MTS_label-SC_seg.json} | 0 ...=> sub-mgh05_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} | 0 ... => sub-mgh05_flip-2_mt-off_space-other_MTS_label-SC_seg.json} | 0 ...> sub-mgh05_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} | 0 ...eg-manual.json => sub-mgh05_space-other_T1w_label-SC_seg.json} | 0 ...anual.nii.gz => sub-mgh05_space-other_T1w_label-SC_seg.nii.gz} | 0 ...ual.json => sub-mgh05_space-other_T1w_label-discs_dlabel.json} | 0 ...nii.gz => sub-mgh05_space-other_T1w_label-discs_dlabel.nii.gz} | 0 ...manual.json => sub-mgh05_space-other_T2star_label-SC_seg.json} | 0 ...al.nii.gz => sub-mgh05_space-other_T2star_label-SC_seg.nii.gz} | 0 ...eg-manual.json => sub-mgh05_space-other_T2w_label-SC_seg.json} | 0 ...anual.nii.gz => sub-mgh05_space-other_T2w_label-SC_seg.nii.gz} | 0 ...ual.json => sub-mgh05_space-other_T2w_label-discs_dlabel.json} | 0 ...nii.gz => sub-mgh05_space-other_T2w_label-discs_dlabel.nii.gz} | 0 ...eg-manual.json => sub-mgh05_rec-average_dwi_label-SC_seg.json} | 0 ...anual.nii.gz => sub-mgh05_rec-average_dwi_label-SC_seg.nii.gz} | 0 ...n => sub-mgh06_flip-1_mt-on_space-other_MTS_label-SC_seg.json} | 0 ...=> sub-mgh06_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} | 0 ... => sub-mgh06_flip-2_mt-off_space-other_MTS_label-SC_seg.json} | 0 ...> sub-mgh06_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} | 0 ...eg-manual.json => sub-mgh06_space-other_T1w_label-SC_seg.json} | 0 ...anual.nii.gz => sub-mgh06_space-other_T1w_label-SC_seg.nii.gz} | 0 ...ual.json => sub-mgh06_space-other_T1w_label-discs_dlabel.json} | 0 ...nii.gz => sub-mgh06_space-other_T1w_label-discs_dlabel.nii.gz} | 0 ...manual.json => sub-mgh06_space-other_T2star_label-SC_seg.json} | 0 ...al.nii.gz => sub-mgh06_space-other_T2star_label-SC_seg.nii.gz} | 0 ...eg-manual.json => sub-mgh06_space-other_T2w_label-SC_seg.json} | 0 ...anual.nii.gz => sub-mgh06_space-other_T2w_label-SC_seg.nii.gz} | 0 ...ual.json => sub-mgh06_space-other_T2w_label-discs_dlabel.json} | 0 ...nii.gz => sub-mgh06_space-other_T2w_label-discs_dlabel.nii.gz} | 0 ...eg-manual.json => sub-mgh06_rec-average_dwi_label-SC_seg.json} | 0 ...anual.nii.gz => sub-mgh06_rec-average_dwi_label-SC_seg.nii.gz} | 0 ...=> sub-milan01_flip-1_mt-on_space-other_MTS_label-SC_seg.json} | 0 ... sub-milan01_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} | 0 ...> sub-milan01_flip-2_mt-off_space-other_MTS_label-SC_seg.json} | 0 ...sub-milan01_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} | 0 ...-manual.json => sub-milan01_space-other_T1w_label-SC_seg.json} | 0 ...ual.nii.gz => sub-milan01_space-other_T1w_label-SC_seg.nii.gz} | 0 ...l.json => sub-milan01_space-other_T1w_label-discs_dlabel.json} | 0 ...i.gz => sub-milan01_space-other_T1w_label-discs_dlabel.nii.gz} | 0 ...nual.json => sub-milan01_space-other_T2star_label-SC_seg.json} | 0 ....nii.gz => sub-milan01_space-other_T2star_label-SC_seg.nii.gz} | 0 ...-manual.json => sub-milan01_space-other_T2w_label-SC_seg.json} | 0 ...ual.nii.gz => sub-milan01_space-other_T2w_label-SC_seg.nii.gz} | 0 ...l.json => sub-milan01_space-other_T2w_label-discs_dlabel.json} | 0 ...i.gz => sub-milan01_space-other_T2w_label-discs_dlabel.nii.gz} | 0 ...-manual.json => sub-milan01_rec-average_dwi_label-SC_seg.json} | 0 ...ual.nii.gz => sub-milan01_rec-average_dwi_label-SC_seg.nii.gz} | 0 ...=> sub-milan02_flip-1_mt-on_space-other_MTS_label-SC_seg.json} | 0 ... sub-milan02_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} | 0 ...> sub-milan02_flip-2_mt-off_space-other_MTS_label-SC_seg.json} | 0 ...sub-milan02_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} | 0 ...-manual.json => sub-milan02_space-other_T1w_label-SC_seg.json} | 0 ...ual.nii.gz => sub-milan02_space-other_T1w_label-SC_seg.nii.gz} | 0 ...l.json => sub-milan02_space-other_T1w_label-discs_dlabel.json} | 0 ...i.gz => sub-milan02_space-other_T1w_label-discs_dlabel.nii.gz} | 0 ...nual.json => sub-milan02_space-other_T2star_label-SC_seg.json} | 0 ....nii.gz => sub-milan02_space-other_T2star_label-SC_seg.nii.gz} | 0 ...-manual.json => sub-milan02_space-other_T2w_label-SC_seg.json} | 0 ...ual.nii.gz => sub-milan02_space-other_T2w_label-SC_seg.nii.gz} | 0 ...l.json => sub-milan02_space-other_T2w_label-discs_dlabel.json} | 0 ...i.gz => sub-milan02_space-other_T2w_label-discs_dlabel.nii.gz} | 0 ...-manual.json => sub-milan02_rec-average_dwi_label-SC_seg.json} | 0 ...ual.nii.gz => sub-milan02_rec-average_dwi_label-SC_seg.nii.gz} | 0 ...=> sub-milan03_flip-1_mt-on_space-other_MTS_label-SC_seg.json} | 0 ... sub-milan03_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} | 0 ...> sub-milan03_flip-2_mt-off_space-other_MTS_label-SC_seg.json} | 0 ...sub-milan03_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} | 0 ...-manual.json => sub-milan03_space-other_T1w_label-SC_seg.json} | 0 ...ual.nii.gz => sub-milan03_space-other_T1w_label-SC_seg.nii.gz} | 0 ...l.json => sub-milan03_space-other_T1w_label-discs_dlabel.json} | 0 ...i.gz => sub-milan03_space-other_T1w_label-discs_dlabel.nii.gz} | 0 ...nual.json => sub-milan03_space-other_T2star_label-SC_seg.json} | 0 ....nii.gz => sub-milan03_space-other_T2star_label-SC_seg.nii.gz} | 0 ...-manual.json => sub-milan03_space-other_T2w_label-SC_seg.json} | 0 ...ual.nii.gz => sub-milan03_space-other_T2w_label-SC_seg.nii.gz} | 0 ...l.json => sub-milan03_space-other_T2w_label-discs_dlabel.json} | 0 ...i.gz => sub-milan03_space-other_T2w_label-discs_dlabel.nii.gz} | 0 ...-manual.json => sub-milan03_rec-average_dwi_label-SC_seg.json} | 0 ...ual.nii.gz => sub-milan03_rec-average_dwi_label-SC_seg.nii.gz} | 0 ...=> sub-milan04_flip-1_mt-on_space-other_MTS_label-SC_seg.json} | 0 ... sub-milan04_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} | 0 ...> sub-milan04_flip-2_mt-off_space-other_MTS_label-SC_seg.json} | 0 ...sub-milan04_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} | 0 ...-manual.json => sub-milan04_space-other_T1w_label-SC_seg.json} | 0 ...ual.nii.gz => sub-milan04_space-other_T1w_label-SC_seg.nii.gz} | 0 ...l.json => sub-milan04_space-other_T1w_label-discs_dlabel.json} | 0 ...i.gz => sub-milan04_space-other_T1w_label-discs_dlabel.nii.gz} | 0 ...nual.json => sub-milan04_space-other_T2star_label-SC_seg.json} | 0 ....nii.gz => sub-milan04_space-other_T2star_label-SC_seg.nii.gz} | 0 ...-manual.json => sub-milan04_space-other_T2w_label-SC_seg.json} | 0 ...ual.nii.gz => sub-milan04_space-other_T2w_label-SC_seg.nii.gz} | 0 ...l.json => sub-milan04_space-other_T2w_label-discs_dlabel.json} | 0 ...i.gz => sub-milan04_space-other_T2w_label-discs_dlabel.nii.gz} | 0 ...-manual.json => sub-milan04_rec-average_dwi_label-SC_seg.json} | 0 ...ual.nii.gz => sub-milan04_rec-average_dwi_label-SC_seg.nii.gz} | 0 ...=> sub-milan05_flip-1_mt-on_space-other_MTS_label-SC_seg.json} | 0 ... sub-milan05_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} | 0 ...> sub-milan05_flip-2_mt-off_space-other_MTS_label-SC_seg.json} | 0 ...sub-milan05_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} | 0 ...-manual.json => sub-milan05_space-other_T1w_label-SC_seg.json} | 0 ...ual.nii.gz => sub-milan05_space-other_T1w_label-SC_seg.nii.gz} | 0 ...l.json => sub-milan05_space-other_T1w_label-discs_dlabel.json} | 0 ...i.gz => sub-milan05_space-other_T1w_label-discs_dlabel.nii.gz} | 0 ...nual.json => sub-milan05_space-other_T2star_label-SC_seg.json} | 0 ....nii.gz => sub-milan05_space-other_T2star_label-SC_seg.nii.gz} | 0 ...-manual.json => sub-milan05_space-other_T2w_label-SC_seg.json} | 0 ...ual.nii.gz => sub-milan05_space-other_T2w_label-SC_seg.nii.gz} | 0 ...l.json => sub-milan05_space-other_T2w_label-discs_dlabel.json} | 0 ...i.gz => sub-milan05_space-other_T2w_label-discs_dlabel.nii.gz} | 0 ...-manual.json => sub-milan05_rec-average_dwi_label-SC_seg.json} | 0 ...ual.nii.gz => sub-milan05_rec-average_dwi_label-SC_seg.nii.gz} | 0 ...=> sub-milan06_flip-1_mt-on_space-other_MTS_label-SC_seg.json} | 0 ... sub-milan06_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} | 0 ...> sub-milan06_flip-2_mt-off_space-other_MTS_label-SC_seg.json} | 0 ...sub-milan06_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} | 0 ...-manual.json => sub-milan06_space-other_T1w_label-SC_seg.json} | 0 ...ual.nii.gz => sub-milan06_space-other_T1w_label-SC_seg.nii.gz} | 0 ...l.json => sub-milan06_space-other_T1w_label-discs_dlabel.json} | 0 ...i.gz => sub-milan06_space-other_T1w_label-discs_dlabel.nii.gz} | 0 ...nual.json => sub-milan06_space-other_T2star_label-SC_seg.json} | 0 ....nii.gz => sub-milan06_space-other_T2star_label-SC_seg.nii.gz} | 0 ...-manual.json => sub-milan06_space-other_T2w_label-SC_seg.json} | 0 ...ual.nii.gz => sub-milan06_space-other_T2w_label-SC_seg.nii.gz} | 0 ...l.json => sub-milan06_space-other_T2w_label-discs_dlabel.json} | 0 ...i.gz => sub-milan06_space-other_T2w_label-discs_dlabel.nii.gz} | 0 ...-manual.json => sub-milan06_rec-average_dwi_label-SC_seg.json} | 0 ...ual.nii.gz => sub-milan06_rec-average_dwi_label-SC_seg.nii.gz} | 0 ...=> sub-milan07_flip-1_mt-on_space-other_MTS_label-SC_seg.json} | 0 ... sub-milan07_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} | 0 ...> sub-milan07_flip-2_mt-off_space-other_MTS_label-SC_seg.json} | 0 ...sub-milan07_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} | 0 ...-manual.json => sub-milan07_space-other_T1w_label-SC_seg.json} | 0 ...ual.nii.gz => sub-milan07_space-other_T1w_label-SC_seg.nii.gz} | 0 ...l.json => sub-milan07_space-other_T1w_label-discs_dlabel.json} | 0 ...i.gz => sub-milan07_space-other_T1w_label-discs_dlabel.nii.gz} | 0 ...nual.json => sub-milan07_space-other_T2star_label-SC_seg.json} | 0 ....nii.gz => sub-milan07_space-other_T2star_label-SC_seg.nii.gz} | 0 ...-manual.json => sub-milan07_space-other_T2w_label-SC_seg.json} | 0 ...ual.nii.gz => sub-milan07_space-other_T2w_label-SC_seg.nii.gz} | 0 ...l.json => sub-milan07_space-other_T2w_label-discs_dlabel.json} | 0 ...i.gz => sub-milan07_space-other_T2w_label-discs_dlabel.nii.gz} | 0 ...-manual.json => sub-milan07_rec-average_dwi_label-SC_seg.json} | 0 ...ual.nii.gz => sub-milan07_rec-average_dwi_label-SC_seg.nii.gz} | 0 ... sub-mniPilot1_flip-1_mt-on_space-other_MTS_label-SC_seg.json} | 0 ...ub-mniPilot1_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} | 0 ...sub-mniPilot1_flip-2_mt-off_space-other_MTS_label-SC_seg.json} | 0 ...b-mniPilot1_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} | 0 ...anual.json => sub-mniPilot1_space-other_T1w_label-SC_seg.json} | 0 ...l.nii.gz => sub-mniPilot1_space-other_T1w_label-SC_seg.nii.gz} | 0 ...json => sub-mniPilot1_space-other_T1w_label-discs_dlabel.json} | 0 ...gz => sub-mniPilot1_space-other_T1w_label-discs_dlabel.nii.gz} | 0 ...al.json => sub-mniPilot1_space-other_T2star_label-SC_seg.json} | 0 ...ii.gz => sub-mniPilot1_space-other_T2star_label-SC_seg.nii.gz} | 0 ...anual.json => sub-mniPilot1_space-other_T2w_label-SC_seg.json} | 0 ...l.nii.gz => sub-mniPilot1_space-other_T2w_label-SC_seg.nii.gz} | 0 ...json => sub-mniPilot1_space-other_T2w_label-discs_dlabel.json} | 0 ...gz => sub-mniPilot1_space-other_T2w_label-discs_dlabel.nii.gz} | 0 ...anual.json => sub-mniPilot1_rec-average_dwi_label-SC_seg.json} | 0 ...l.nii.gz => sub-mniPilot1_rec-average_dwi_label-SC_seg.nii.gz} | 0 ... => sub-mniS01_flip-1_mt-on_space-other_MTS_label-SC_seg.json} | 0 ...> sub-mniS01_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} | 0 ...=> sub-mniS01_flip-2_mt-off_space-other_MTS_label-SC_seg.json} | 0 ... sub-mniS01_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} | 0 ...g-manual.json => sub-mniS01_space-other_T1w_label-SC_seg.json} | 0 ...nual.nii.gz => sub-mniS01_space-other_T1w_label-SC_seg.nii.gz} | 0 ...al.json => sub-mniS01_space-other_T1w_label-discs_dlabel.json} | 0 ...ii.gz => sub-mniS01_space-other_T1w_label-discs_dlabel.nii.gz} | 0 ...anual.json => sub-mniS01_space-other_T2star_label-SC_seg.json} | 0 ...l.nii.gz => sub-mniS01_space-other_T2star_label-SC_seg.nii.gz} | 0 ...g-manual.json => sub-mniS01_space-other_T2w_label-SC_seg.json} | 0 ...nual.nii.gz => sub-mniS01_space-other_T2w_label-SC_seg.nii.gz} | 0 ...al.json => sub-mniS01_space-other_T2w_label-discs_dlabel.json} | 0 ...ii.gz => sub-mniS01_space-other_T2w_label-discs_dlabel.nii.gz} | 0 ...g-manual.json => sub-mniS01_rec-average_dwi_label-SC_seg.json} | 0 ...nual.nii.gz => sub-mniS01_rec-average_dwi_label-SC_seg.nii.gz} | 0 ... => sub-mniS02_flip-1_mt-on_space-other_MTS_label-SC_seg.json} | 0 ...> sub-mniS02_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} | 0 ...=> sub-mniS02_flip-2_mt-off_space-other_MTS_label-SC_seg.json} | 0 ... sub-mniS02_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} | 0 ...g-manual.json => sub-mniS02_space-other_T1w_label-SC_seg.json} | 0 ...nual.nii.gz => sub-mniS02_space-other_T1w_label-SC_seg.nii.gz} | 0 ...al.json => sub-mniS02_space-other_T1w_label-discs_dlabel.json} | 0 ...ii.gz => sub-mniS02_space-other_T1w_label-discs_dlabel.nii.gz} | 0 ...anual.json => sub-mniS02_space-other_T2star_label-SC_seg.json} | 0 ...l.nii.gz => sub-mniS02_space-other_T2star_label-SC_seg.nii.gz} | 0 ...g-manual.json => sub-mniS02_space-other_T2w_label-SC_seg.json} | 0 ...nual.nii.gz => sub-mniS02_space-other_T2w_label-SC_seg.nii.gz} | 0 ...al.json => sub-mniS02_space-other_T2w_label-discs_dlabel.json} | 0 ...ii.gz => sub-mniS02_space-other_T2w_label-discs_dlabel.nii.gz} | 0 ...g-manual.json => sub-mniS02_rec-average_dwi_label-SC_seg.json} | 0 ...nual.nii.gz => sub-mniS02_rec-average_dwi_label-SC_seg.nii.gz} | 0 ... => sub-mniS03_flip-1_mt-on_space-other_MTS_label-SC_seg.json} | 0 ...> sub-mniS03_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} | 0 ...=> sub-mniS03_flip-2_mt-off_space-other_MTS_label-SC_seg.json} | 0 ... sub-mniS03_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} | 0 ...g-manual.json => sub-mniS03_space-other_T1w_label-SC_seg.json} | 0 ...nual.nii.gz => sub-mniS03_space-other_T1w_label-SC_seg.nii.gz} | 0 ...al.json => sub-mniS03_space-other_T1w_label-discs_dlabel.json} | 0 ...ii.gz => sub-mniS03_space-other_T1w_label-discs_dlabel.nii.gz} | 0 ...anual.json => sub-mniS03_space-other_T2star_label-SC_seg.json} | 0 ...l.nii.gz => sub-mniS03_space-other_T2star_label-SC_seg.nii.gz} | 0 ...g-manual.json => sub-mniS03_space-other_T2w_label-SC_seg.json} | 0 ...nual.nii.gz => sub-mniS03_space-other_T2w_label-SC_seg.nii.gz} | 0 ...al.json => sub-mniS03_space-other_T2w_label-discs_dlabel.json} | 0 ...ii.gz => sub-mniS03_space-other_T2w_label-discs_dlabel.nii.gz} | 0 ...g-manual.json => sub-mniS03_rec-average_dwi_label-SC_seg.json} | 0 ...nual.nii.gz => sub-mniS03_rec-average_dwi_label-SC_seg.nii.gz} | 0 ... => sub-mniS04_flip-1_mt-on_space-other_MTS_label-SC_seg.json} | 0 ...> sub-mniS04_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} | 0 ...=> sub-mniS04_flip-2_mt-off_space-other_MTS_label-SC_seg.json} | 0 ... sub-mniS04_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} | 0 ...g-manual.json => sub-mniS04_space-other_T1w_label-SC_seg.json} | 0 ...nual.nii.gz => sub-mniS04_space-other_T1w_label-SC_seg.nii.gz} | 0 ...al.json => sub-mniS04_space-other_T1w_label-discs_dlabel.json} | 0 ...ii.gz => sub-mniS04_space-other_T1w_label-discs_dlabel.nii.gz} | 0 ...anual.json => sub-mniS04_space-other_T2star_label-SC_seg.json} | 0 ...l.nii.gz => sub-mniS04_space-other_T2star_label-SC_seg.nii.gz} | 0 ...g-manual.json => sub-mniS04_space-other_T2w_label-SC_seg.json} | 0 ...nual.nii.gz => sub-mniS04_space-other_T2w_label-SC_seg.nii.gz} | 0 ...al.json => sub-mniS04_space-other_T2w_label-discs_dlabel.json} | 0 ...ii.gz => sub-mniS04_space-other_T2w_label-discs_dlabel.nii.gz} | 0 ...g-manual.json => sub-mniS04_rec-average_dwi_label-SC_seg.json} | 0 ...nual.nii.gz => sub-mniS04_rec-average_dwi_label-SC_seg.nii.gz} | 0 ... => sub-mniS05_flip-1_mt-on_space-other_MTS_label-SC_seg.json} | 0 ...> sub-mniS05_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} | 0 ...=> sub-mniS05_flip-2_mt-off_space-other_MTS_label-SC_seg.json} | 0 ... sub-mniS05_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} | 0 ...g-manual.json => sub-mniS05_space-other_T1w_label-SC_seg.json} | 0 ...nual.nii.gz => sub-mniS05_space-other_T1w_label-SC_seg.nii.gz} | 0 ...al.json => sub-mniS05_space-other_T1w_label-discs_dlabel.json} | 0 ...ii.gz => sub-mniS05_space-other_T1w_label-discs_dlabel.nii.gz} | 0 ...ual.json => sub-mniS05_space-other_T2star_gmlabel-SC_seg.json} | 0 ...nii.gz => sub-mniS05_space-other_T2star_gmlabel-SC_seg.nii.gz} | 0 ...anual.json => sub-mniS05_space-other_T2star_label-SC_seg.json} | 0 ...l.nii.gz => sub-mniS05_space-other_T2star_label-SC_seg.nii.gz} | 0 ...g-manual.json => sub-mniS05_space-other_T2w_label-SC_seg.json} | 0 ...nual.nii.gz => sub-mniS05_space-other_T2w_label-SC_seg.nii.gz} | 0 ...al.json => sub-mniS05_space-other_T2w_label-discs_dlabel.json} | 0 ...ii.gz => sub-mniS05_space-other_T2w_label-discs_dlabel.nii.gz} | 0 ...g-manual.json => sub-mniS05_rec-average_dwi_label-SC_seg.json} | 0 ...nual.nii.gz => sub-mniS05_rec-average_dwi_label-SC_seg.nii.gz} | 0 ... => sub-mniS06_flip-1_mt-on_space-other_MTS_label-SC_seg.json} | 0 ...> sub-mniS06_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} | 0 ...=> sub-mniS06_flip-2_mt-off_space-other_MTS_label-SC_seg.json} | 0 ... sub-mniS06_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} | 0 ...g-manual.json => sub-mniS06_space-other_T1w_label-SC_seg.json} | 0 ...nual.nii.gz => sub-mniS06_space-other_T1w_label-SC_seg.nii.gz} | 0 ...al.json => sub-mniS06_space-other_T1w_label-discs_dlabel.json} | 0 ...ii.gz => sub-mniS06_space-other_T1w_label-discs_dlabel.nii.gz} | 0 ...anual.json => sub-mniS06_space-other_T2star_label-SC_seg.json} | 0 ...l.nii.gz => sub-mniS06_space-other_T2star_label-SC_seg.nii.gz} | 0 ...g-manual.json => sub-mniS06_space-other_T2w_label-SC_seg.json} | 0 ...nual.nii.gz => sub-mniS06_space-other_T2w_label-SC_seg.nii.gz} | 0 ...al.json => sub-mniS06_space-other_T2w_label-discs_dlabel.json} | 0 ...ii.gz => sub-mniS06_space-other_T2w_label-discs_dlabel.nii.gz} | 0 ...g-manual.json => sub-mniS06_rec-average_dwi_label-SC_seg.json} | 0 ...nual.nii.gz => sub-mniS06_rec-average_dwi_label-SC_seg.nii.gz} | 0 ... => sub-mniS07_flip-1_mt-on_space-other_MTS_label-SC_seg.json} | 0 ...> sub-mniS07_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} | 0 ...=> sub-mniS07_flip-2_mt-off_space-other_MTS_label-SC_seg.json} | 0 ... sub-mniS07_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} | 0 ...g-manual.json => sub-mniS07_space-other_T1w_label-SC_seg.json} | 0 ...nual.nii.gz => sub-mniS07_space-other_T1w_label-SC_seg.nii.gz} | 0 ...al.json => sub-mniS07_space-other_T1w_label-discs_dlabel.json} | 0 ...ii.gz => sub-mniS07_space-other_T1w_label-discs_dlabel.nii.gz} | 0 ...anual.json => sub-mniS07_space-other_T2star_label-SC_seg.json} | 0 ...l.nii.gz => sub-mniS07_space-other_T2star_label-SC_seg.nii.gz} | 0 ...g-manual.json => sub-mniS07_space-other_T2w_label-SC_seg.json} | 0 ...nual.nii.gz => sub-mniS07_space-other_T2w_label-SC_seg.nii.gz} | 0 ...al.json => sub-mniS07_space-other_T2w_label-discs_dlabel.json} | 0 ...ii.gz => sub-mniS07_space-other_T2w_label-discs_dlabel.nii.gz} | 0 ...g-manual.json => sub-mniS07_rec-average_dwi_label-SC_seg.json} | 0 ...nual.nii.gz => sub-mniS07_rec-average_dwi_label-SC_seg.nii.gz} | 0 ... => sub-mniS08_flip-1_mt-on_space-other_MTS_label-SC_seg.json} | 0 ...> sub-mniS08_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} | 0 ...=> sub-mniS08_flip-2_mt-off_space-other_MTS_label-SC_seg.json} | 0 ... sub-mniS08_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} | 0 ...g-manual.json => sub-mniS08_space-other_T1w_label-SC_seg.json} | 0 ...nual.nii.gz => sub-mniS08_space-other_T1w_label-SC_seg.nii.gz} | 0 ...al.json => sub-mniS08_space-other_T1w_label-discs_dlabel.json} | 0 ...ii.gz => sub-mniS08_space-other_T1w_label-discs_dlabel.nii.gz} | 0 ...anual.json => sub-mniS08_space-other_T2star_label-SC_seg.json} | 0 ...l.nii.gz => sub-mniS08_space-other_T2star_label-SC_seg.nii.gz} | 0 ...g-manual.json => sub-mniS08_space-other_T2w_label-SC_seg.json} | 0 ...nual.nii.gz => sub-mniS08_space-other_T2w_label-SC_seg.nii.gz} | 0 ...al.json => sub-mniS08_space-other_T2w_label-discs_dlabel.json} | 0 ...ii.gz => sub-mniS08_space-other_T2w_label-discs_dlabel.nii.gz} | 0 ...g-manual.json => sub-mniS08_rec-average_dwi_label-SC_seg.json} | 0 ...nual.nii.gz => sub-mniS08_rec-average_dwi_label-SC_seg.nii.gz} | 0 ... => sub-mniS09_flip-1_mt-on_space-other_MTS_label-SC_seg.json} | 0 ...> sub-mniS09_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} | 0 ...=> sub-mniS09_flip-2_mt-off_space-other_MTS_label-SC_seg.json} | 0 ... sub-mniS09_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} | 0 ...g-manual.json => sub-mniS09_space-other_T1w_label-SC_seg.json} | 0 ...nual.nii.gz => sub-mniS09_space-other_T1w_label-SC_seg.nii.gz} | 0 ...al.json => sub-mniS09_space-other_T1w_label-discs_dlabel.json} | 0 ...ii.gz => sub-mniS09_space-other_T1w_label-discs_dlabel.nii.gz} | 0 ...anual.json => sub-mniS09_space-other_T2star_label-SC_seg.json} | 0 ...l.nii.gz => sub-mniS09_space-other_T2star_label-SC_seg.nii.gz} | 0 ...g-manual.json => sub-mniS09_space-other_T2w_label-SC_seg.json} | 0 ...nual.nii.gz => sub-mniS09_space-other_T2w_label-SC_seg.nii.gz} | 0 ...al.json => sub-mniS09_space-other_T2w_label-discs_dlabel.json} | 0 ...ii.gz => sub-mniS09_space-other_T2w_label-discs_dlabel.nii.gz} | 0 ...g-manual.json => sub-mniS09_rec-average_dwi_label-SC_seg.json} | 0 ...nual.nii.gz => sub-mniS09_rec-average_dwi_label-SC_seg.nii.gz} | 0 ...b-mountSinai01_flip-1_mt-on_space-other_MTS_label-SC_seg.json} | 0 ...mountSinai01_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} | 0 ...-mountSinai01_flip-2_mt-off_space-other_MTS_label-SC_seg.json} | 0 ...ountSinai01_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} | 0 ...al.json => sub-mountSinai01_space-other_T1w_label-SC_seg.json} | 0 ...ii.gz => sub-mountSinai01_space-other_T1w_label-SC_seg.nii.gz} | 0 ...n => sub-mountSinai01_space-other_T1w_label-discs_dlabel.json} | 0 ...=> sub-mountSinai01_space-other_T1w_label-discs_dlabel.nii.gz} | 0 ...json => sub-mountSinai01_space-other_T2star_label-SC_seg.json} | 0 ...gz => sub-mountSinai01_space-other_T2star_label-SC_seg.nii.gz} | 0 ...al.json => sub-mountSinai01_space-other_T2w_label-SC_seg.json} | 0 ...ii.gz => sub-mountSinai01_space-other_T2w_label-SC_seg.nii.gz} | 0 ...n => sub-mountSinai01_space-other_T2w_label-discs_dlabel.json} | 0 ...=> sub-mountSinai01_space-other_T2w_label-discs_dlabel.nii.gz} | 0 ...al.json => sub-mountSinai01_rec-average_dwi_label-SC_seg.json} | 0 ...ii.gz => sub-mountSinai01_rec-average_dwi_label-SC_seg.nii.gz} | 0 ...b-mountSinai02_flip-1_mt-on_space-other_MTS_label-SC_seg.json} | 0 ...mountSinai02_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} | 0 ...-mountSinai02_flip-2_mt-off_space-other_MTS_label-SC_seg.json} | 0 ...ountSinai02_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} | 0 ...al.json => sub-mountSinai02_space-other_T1w_label-SC_seg.json} | 0 ...ii.gz => sub-mountSinai02_space-other_T1w_label-SC_seg.nii.gz} | 0 ...n => sub-mountSinai02_space-other_T1w_label-discs_dlabel.json} | 0 ...=> sub-mountSinai02_space-other_T1w_label-discs_dlabel.nii.gz} | 0 ...json => sub-mountSinai02_space-other_T2star_label-SC_seg.json} | 0 ...gz => sub-mountSinai02_space-other_T2star_label-SC_seg.nii.gz} | 0 ...al.json => sub-mountSinai02_space-other_T2w_label-SC_seg.json} | 0 ...ii.gz => sub-mountSinai02_space-other_T2w_label-SC_seg.nii.gz} | 0 ...n => sub-mountSinai02_space-other_T2w_label-discs_dlabel.json} | 0 ...=> sub-mountSinai02_space-other_T2w_label-discs_dlabel.nii.gz} | 0 ...al.json => sub-mountSinai02_rec-average_dwi_label-SC_seg.json} | 0 ...ii.gz => sub-mountSinai02_rec-average_dwi_label-SC_seg.nii.gz} | 0 ...b-mountSinai03_flip-1_mt-on_space-other_MTS_label-SC_seg.json} | 0 ...mountSinai03_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} | 0 ...-mountSinai03_flip-2_mt-off_space-other_MTS_label-SC_seg.json} | 0 ...ountSinai03_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} | 0 ...al.json => sub-mountSinai03_space-other_T1w_label-SC_seg.json} | 0 ...ii.gz => sub-mountSinai03_space-other_T1w_label-SC_seg.nii.gz} | 0 ...n => sub-mountSinai03_space-other_T1w_label-discs_dlabel.json} | 0 ...=> sub-mountSinai03_space-other_T1w_label-discs_dlabel.nii.gz} | 0 ...json => sub-mountSinai03_space-other_T2star_label-SC_seg.json} | 0 ...gz => sub-mountSinai03_space-other_T2star_label-SC_seg.nii.gz} | 0 ...al.json => sub-mountSinai03_space-other_T2w_label-SC_seg.json} | 0 ...ii.gz => sub-mountSinai03_space-other_T2w_label-SC_seg.nii.gz} | 0 ...n => sub-mountSinai03_space-other_T2w_label-discs_dlabel.json} | 0 ...=> sub-mountSinai03_space-other_T2w_label-discs_dlabel.nii.gz} | 0 ...al.json => sub-mountSinai03_rec-average_dwi_label-SC_seg.json} | 0 ...ii.gz => sub-mountSinai03_rec-average_dwi_label-SC_seg.nii.gz} | 0 ...b-mountSinai04_flip-1_mt-on_space-other_MTS_label-SC_seg.json} | 0 ...mountSinai04_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} | 0 ...-mountSinai04_flip-2_mt-off_space-other_MTS_label-SC_seg.json} | 0 ...ountSinai04_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} | 0 ...al.json => sub-mountSinai04_space-other_T1w_label-SC_seg.json} | 0 ...ii.gz => sub-mountSinai04_space-other_T1w_label-SC_seg.nii.gz} | 0 ...n => sub-mountSinai04_space-other_T1w_label-discs_dlabel.json} | 0 ...=> sub-mountSinai04_space-other_T1w_label-discs_dlabel.nii.gz} | 0 ...json => sub-mountSinai04_space-other_T2star_label-SC_seg.json} | 0 ...gz => sub-mountSinai04_space-other_T2star_label-SC_seg.nii.gz} | 0 ...al.json => sub-mountSinai04_space-other_T2w_label-SC_seg.json} | 0 ...ii.gz => sub-mountSinai04_space-other_T2w_label-SC_seg.nii.gz} | 0 ...n => sub-mountSinai04_space-other_T2w_label-discs_dlabel.json} | 0 ...=> sub-mountSinai04_space-other_T2w_label-discs_dlabel.nii.gz} | 0 ...al.json => sub-mountSinai04_rec-average_dwi_label-SC_seg.json} | 0 ...ii.gz => sub-mountSinai04_rec-average_dwi_label-SC_seg.nii.gz} | 0 ...b-mountSinai05_flip-1_mt-on_space-other_MTS_label-SC_seg.json} | 0 ...mountSinai05_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} | 0 ...-mountSinai05_flip-2_mt-off_space-other_MTS_label-SC_seg.json} | 0 ...ountSinai05_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} | 0 ...al.json => sub-mountSinai05_space-other_T1w_label-SC_seg.json} | 0 ...ii.gz => sub-mountSinai05_space-other_T1w_label-SC_seg.nii.gz} | 0 ...n => sub-mountSinai05_space-other_T1w_label-discs_dlabel.json} | 0 ...=> sub-mountSinai05_space-other_T1w_label-discs_dlabel.nii.gz} | 0 ...json => sub-mountSinai05_space-other_T2star_label-SC_seg.json} | 0 ...gz => sub-mountSinai05_space-other_T2star_label-SC_seg.nii.gz} | 0 ...al.json => sub-mountSinai05_space-other_T2w_label-SC_seg.json} | 0 ...ii.gz => sub-mountSinai05_space-other_T2w_label-SC_seg.nii.gz} | 0 ...n => sub-mountSinai05_space-other_T2w_label-discs_dlabel.json} | 0 ...=> sub-mountSinai05_space-other_T2w_label-discs_dlabel.nii.gz} | 0 ...al.json => sub-mountSinai05_rec-average_dwi_label-SC_seg.json} | 0 ...ii.gz => sub-mountSinai05_rec-average_dwi_label-SC_seg.nii.gz} | 0 ...b-mountSinai06_flip-1_mt-on_space-other_MTS_label-SC_seg.json} | 0 ...mountSinai06_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} | 0 ...-mountSinai06_flip-2_mt-off_space-other_MTS_label-SC_seg.json} | 0 ...ountSinai06_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} | 0 ...al.json => sub-mountSinai06_space-other_T1w_label-SC_seg.json} | 0 ...ii.gz => sub-mountSinai06_space-other_T1w_label-SC_seg.nii.gz} | 0 ...n => sub-mountSinai06_space-other_T1w_label-discs_dlabel.json} | 0 ...=> sub-mountSinai06_space-other_T1w_label-discs_dlabel.nii.gz} | 0 ...json => sub-mountSinai06_space-other_T2star_label-SC_seg.json} | 0 ...gz => sub-mountSinai06_space-other_T2star_label-SC_seg.nii.gz} | 0 ...al.json => sub-mountSinai06_space-other_T2w_label-SC_seg.json} | 0 ...ii.gz => sub-mountSinai06_space-other_T2w_label-SC_seg.nii.gz} | 0 ...n => sub-mountSinai06_space-other_T2w_label-discs_dlabel.json} | 0 ...=> sub-mountSinai06_space-other_T2w_label-discs_dlabel.nii.gz} | 0 ...al.json => sub-mountSinai06_rec-average_dwi_label-SC_seg.json} | 0 ...ii.gz => sub-mountSinai06_rec-average_dwi_label-SC_seg.nii.gz} | 0 ...> sub-mpicbs01_flip-1_mt-on_space-other_MTS_label-SC_seg.json} | 0 ...sub-mpicbs01_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} | 0 ... sub-mpicbs01_flip-2_mt-off_space-other_MTS_label-SC_seg.json} | 0 ...ub-mpicbs01_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} | 0 ...manual.json => sub-mpicbs01_space-other_T1w_label-SC_seg.json} | 0 ...al.nii.gz => sub-mpicbs01_space-other_T1w_label-SC_seg.nii.gz} | 0 ....json => sub-mpicbs01_space-other_T1w_label-discs_dlabel.json} | 0 ....gz => sub-mpicbs01_space-other_T1w_label-discs_dlabel.nii.gz} | 0 ...ual.json => sub-mpicbs01_space-other_T2star_label-SC_seg.json} | 0 ...nii.gz => sub-mpicbs01_space-other_T2star_label-SC_seg.nii.gz} | 0 ...manual.json => sub-mpicbs01_space-other_T2w_label-SC_seg.json} | 0 ...al.nii.gz => sub-mpicbs01_space-other_T2w_label-SC_seg.nii.gz} | 0 ....json => sub-mpicbs01_space-other_T2w_label-discs_dlabel.json} | 0 ....gz => sub-mpicbs01_space-other_T2w_label-discs_dlabel.nii.gz} | 0 ...manual.json => sub-mpicbs01_rec-average_dwi_label-SC_seg.json} | 0 ...al.nii.gz => sub-mpicbs01_rec-average_dwi_label-SC_seg.nii.gz} | 0 ...> sub-mpicbs02_flip-1_mt-on_space-other_MTS_label-SC_seg.json} | 0 ...sub-mpicbs02_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} | 0 ... sub-mpicbs02_flip-2_mt-off_space-other_MTS_label-SC_seg.json} | 0 ...ub-mpicbs02_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} | 0 ...manual.json => sub-mpicbs02_space-other_T1w_label-SC_seg.json} | 0 ...al.nii.gz => sub-mpicbs02_space-other_T1w_label-SC_seg.nii.gz} | 0 ....json => sub-mpicbs02_space-other_T1w_label-discs_dlabel.json} | 0 ....gz => sub-mpicbs02_space-other_T1w_label-discs_dlabel.nii.gz} | 0 ...ual.json => sub-mpicbs02_space-other_T2star_label-SC_seg.json} | 0 ...nii.gz => sub-mpicbs02_space-other_T2star_label-SC_seg.nii.gz} | 0 ...manual.json => sub-mpicbs02_space-other_T2w_label-SC_seg.json} | 0 ...al.nii.gz => sub-mpicbs02_space-other_T2w_label-SC_seg.nii.gz} | 0 ....json => sub-mpicbs02_space-other_T2w_label-discs_dlabel.json} | 0 ....gz => sub-mpicbs02_space-other_T2w_label-discs_dlabel.nii.gz} | 0 ...manual.json => sub-mpicbs02_rec-average_dwi_label-SC_seg.json} | 0 ...al.nii.gz => sub-mpicbs02_rec-average_dwi_label-SC_seg.nii.gz} | 0 ...> sub-mpicbs03_flip-1_mt-on_space-other_MTS_label-SC_seg.json} | 0 ...sub-mpicbs03_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} | 0 ... sub-mpicbs03_flip-2_mt-off_space-other_MTS_label-SC_seg.json} | 0 ...ub-mpicbs03_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} | 0 ...manual.json => sub-mpicbs03_space-other_T1w_label-SC_seg.json} | 0 ...al.nii.gz => sub-mpicbs03_space-other_T1w_label-SC_seg.nii.gz} | 0 ....json => sub-mpicbs03_space-other_T1w_label-discs_dlabel.json} | 0 ....gz => sub-mpicbs03_space-other_T1w_label-discs_dlabel.nii.gz} | 0 ...ual.json => sub-mpicbs03_space-other_T2star_label-SC_seg.json} | 0 ...nii.gz => sub-mpicbs03_space-other_T2star_label-SC_seg.nii.gz} | 0 ...manual.json => sub-mpicbs03_space-other_T2w_label-SC_seg.json} | 0 ...al.nii.gz => sub-mpicbs03_space-other_T2w_label-SC_seg.nii.gz} | 0 ....json => sub-mpicbs03_space-other_T2w_label-discs_dlabel.json} | 0 ....gz => sub-mpicbs03_space-other_T2w_label-discs_dlabel.nii.gz} | 0 ...manual.json => sub-mpicbs03_rec-average_dwi_label-SC_seg.json} | 0 ...al.nii.gz => sub-mpicbs03_rec-average_dwi_label-SC_seg.nii.gz} | 0 ...> sub-mpicbs05_flip-1_mt-on_space-other_MTS_label-SC_seg.json} | 0 ...sub-mpicbs05_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} | 0 ... sub-mpicbs05_flip-2_mt-off_space-other_MTS_label-SC_seg.json} | 0 ...ub-mpicbs05_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} | 0 ...manual.json => sub-mpicbs05_space-other_T1w_label-SC_seg.json} | 0 ...al.nii.gz => sub-mpicbs05_space-other_T1w_label-SC_seg.nii.gz} | 0 ....json => sub-mpicbs05_space-other_T1w_label-discs_dlabel.json} | 0 ....gz => sub-mpicbs05_space-other_T1w_label-discs_dlabel.nii.gz} | 0 ...ual.json => sub-mpicbs05_space-other_T2star_label-SC_seg.json} | 0 ...nii.gz => sub-mpicbs05_space-other_T2star_label-SC_seg.nii.gz} | 0 ...manual.json => sub-mpicbs05_space-other_T2w_label-SC_seg.json} | 0 ...al.nii.gz => sub-mpicbs05_space-other_T2w_label-SC_seg.nii.gz} | 0 ....json => sub-mpicbs05_space-other_T2w_label-discs_dlabel.json} | 0 ....gz => sub-mpicbs05_space-other_T2w_label-discs_dlabel.nii.gz} | 0 ...manual.json => sub-mpicbs05_rec-average_dwi_label-SC_seg.json} | 0 ...al.nii.gz => sub-mpicbs05_rec-average_dwi_label-SC_seg.nii.gz} | 0 ...> sub-mpicbs06_flip-1_mt-on_space-other_MTS_label-SC_seg.json} | 0 ...sub-mpicbs06_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} | 0 ... sub-mpicbs06_flip-2_mt-off_space-other_MTS_label-SC_seg.json} | 0 ...ub-mpicbs06_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} | 0 ...manual.json => sub-mpicbs06_space-other_T1w_label-SC_seg.json} | 0 ...al.nii.gz => sub-mpicbs06_space-other_T1w_label-SC_seg.nii.gz} | 0 ....json => sub-mpicbs06_space-other_T1w_label-discs_dlabel.json} | 0 ....gz => sub-mpicbs06_space-other_T1w_label-discs_dlabel.nii.gz} | 0 ...ual.json => sub-mpicbs06_space-other_T2star_label-SC_seg.json} | 0 ...nii.gz => sub-mpicbs06_space-other_T2star_label-SC_seg.nii.gz} | 0 ...manual.json => sub-mpicbs06_space-other_T2w_label-SC_seg.json} | 0 ...al.nii.gz => sub-mpicbs06_space-other_T2w_label-SC_seg.nii.gz} | 0 ....json => sub-mpicbs06_space-other_T2w_label-discs_dlabel.json} | 0 ....gz => sub-mpicbs06_space-other_T2w_label-discs_dlabel.nii.gz} | 0 ...manual.json => sub-mpicbs06_rec-average_dwi_label-SC_seg.json} | 0 ...al.nii.gz => sub-mpicbs06_rec-average_dwi_label-SC_seg.nii.gz} | 0 ...> sub-mpicbs07_flip-1_mt-on_space-other_MTS_label-SC_seg.json} | 0 ...sub-mpicbs07_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} | 0 ... sub-mpicbs07_flip-2_mt-off_space-other_MTS_label-SC_seg.json} | 0 ...ub-mpicbs07_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} | 0 ...manual.json => sub-mpicbs07_space-other_T1w_label-SC_seg.json} | 0 ...al.nii.gz => sub-mpicbs07_space-other_T1w_label-SC_seg.nii.gz} | 0 ....json => sub-mpicbs07_space-other_T1w_label-discs_dlabel.json} | 0 ....gz => sub-mpicbs07_space-other_T1w_label-discs_dlabel.nii.gz} | 0 ...ual.json => sub-mpicbs07_space-other_T2star_label-SC_seg.json} | 0 ...nii.gz => sub-mpicbs07_space-other_T2star_label-SC_seg.nii.gz} | 0 ...manual.json => sub-mpicbs07_space-other_T2w_label-SC_seg.json} | 0 ...al.nii.gz => sub-mpicbs07_space-other_T2w_label-SC_seg.nii.gz} | 0 ....json => sub-mpicbs07_space-other_T2w_label-discs_dlabel.json} | 0 ....gz => sub-mpicbs07_space-other_T2w_label-discs_dlabel.nii.gz} | 0 ...manual.json => sub-mpicbs07_rec-average_dwi_label-SC_seg.json} | 0 ...al.nii.gz => sub-mpicbs07_rec-average_dwi_label-SC_seg.nii.gz} | 0 ... sub-nottwil01_flip-1_mt-on_space-other_MTS_label-SC_seg.json} | 0 ...ub-nottwil01_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} | 0 ...sub-nottwil01_flip-2_mt-off_space-other_MTS_label-SC_seg.json} | 0 ...b-nottwil01_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} | 0 ...anual.json => sub-nottwil01_space-other_T1w_label-SC_seg.json} | 0 ...l.nii.gz => sub-nottwil01_space-other_T1w_label-SC_seg.nii.gz} | 0 ...json => sub-nottwil01_space-other_T1w_label-discs_dlabel.json} | 0 ...gz => sub-nottwil01_space-other_T1w_label-discs_dlabel.nii.gz} | 0 ....json => sub-nottwil01_space-other_T2star_gmlabel-SC_seg.json} | 0 ....gz => 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sub-pavia01_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} | 0 ...> sub-pavia01_flip-2_mt-off_space-other_MTS_label-SC_seg.json} | 0 ...sub-pavia01_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} | 0 ...-manual.json => sub-pavia01_space-other_T1w_label-SC_seg.json} | 0 ...ual.nii.gz => sub-pavia01_space-other_T1w_label-SC_seg.nii.gz} | 0 ...l.json => sub-pavia01_space-other_T1w_label-discs_dlabel.json} | 0 ...i.gz => sub-pavia01_space-other_T1w_label-discs_dlabel.nii.gz} | 0 ...nual.json => sub-pavia01_space-other_T2star_label-SC_seg.json} | 0 ....nii.gz => sub-pavia01_space-other_T2star_label-SC_seg.nii.gz} | 0 ...-manual.json => sub-pavia01_space-other_T2w_label-SC_seg.json} | 0 ...ual.nii.gz => sub-pavia01_space-other_T2w_label-SC_seg.nii.gz} | 0 ...l.json => sub-pavia01_space-other_T2w_label-discs_dlabel.json} | 0 ...i.gz => sub-pavia01_space-other_T2w_label-discs_dlabel.nii.gz} | 0 ...-manual.json => sub-pavia01_rec-average_dwi_label-SC_seg.json} | 0 ...ual.nii.gz => 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sub-barcelona05_space-other_T2w_label-SC_softseg.nii.gz} | 0 ...json => sub-barcelona05_rec-average_dwi_label-SC_softseg.json} | 0 ...gz => sub-barcelona05_rec-average_dwi_label-SC_softseg.nii.gz} | 0 ...arcelona06_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} | 0 ...celona06_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} | 0 ...rcelona06_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} | 0 ...elona06_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz} | 0 ...json => sub-barcelona06_space-other_T1w_label-SC_softseg.json} | 0 ...gz => sub-barcelona06_space-other_T1w_label-SC_softseg.nii.gz} | 0 ...n => sub-barcelona06_space-other_T2star_label-SC_softseg.json} | 0 ...=> sub-barcelona06_space-other_T2star_label-SC_softseg.nii.gz} | 0 ...json => sub-barcelona06_space-other_T2w_label-SC_softseg.json} | 0 ...gz => sub-barcelona06_space-other_T2w_label-SC_softseg.nii.gz} | 0 ...json => sub-barcelona06_rec-average_dwi_label-SC_softseg.json} | 0 ...gz => 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sub-beijingGE04_space-other_T2star_label-SC_softseg.nii.gz} | 0 ...json => sub-beijingGE04_space-other_T2w_label-SC_softseg.json} | 0 ...gz => sub-beijingGE04_space-other_T2w_label-SC_softseg.nii.gz} | 0 ...json => sub-beijingGE04_rec-average_dwi_label-SC_softseg.json} | 0 ...gz => sub-beijingGE04_rec-average_dwi_label-SC_softseg.nii.gz} | 0 ...ngPrisma01_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} | 0 ...Prisma01_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} | 0 ...gPrisma01_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} | 0 ...risma01_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz} | 0 ... => sub-beijingPrisma01_space-other_T1w_label-SC_softseg.json} | 0 ...> sub-beijingPrisma01_space-other_T1w_label-SC_softseg.nii.gz} | 0 ... sub-beijingPrisma01_space-other_T2star_label-SC_softseg.json} | 0 ...ub-beijingPrisma01_space-other_T2star_label-SC_softseg.nii.gz} | 0 ... => sub-beijingPrisma01_space-other_T2w_label-SC_softseg.json} | 0 ...> 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sub-tokyo750w05_space-other_T1w_label-SC_softseg.nii.gz} | 0 ...n => sub-tokyo750w05_space-other_T2star_label-SC_softseg.json} | 0 ...=> sub-tokyo750w05_space-other_T2star_label-SC_softseg.nii.gz} | 0 ...json => sub-tokyo750w05_space-other_T2w_label-SC_softseg.json} | 0 ...gz => sub-tokyo750w05_space-other_T2w_label-SC_softseg.nii.gz} | 0 ...json => sub-tokyo750w05_rec-average_dwi_label-SC_softseg.json} | 0 ...gz => sub-tokyo750w05_rec-average_dwi_label-SC_softseg.nii.gz} | 0 ...okyo750w06_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} | 0 ...yo750w06_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} | 0 ...kyo750w06_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} | 0 ...o750w06_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz} | 0 ...json => sub-tokyo750w06_space-other_T1w_label-SC_softseg.json} | 0 ...gz => sub-tokyo750w06_space-other_T1w_label-SC_softseg.nii.gz} | 0 ...n => sub-tokyo750w06_space-other_T2star_label-SC_softseg.json} | 0 ...=> sub-tokyo750w06_space-other_T2star_label-SC_softseg.nii.gz} | 0 ...json => sub-tokyo750w06_space-other_T2w_label-SC_softseg.json} | 0 ...gz => sub-tokyo750w06_space-other_T2w_label-SC_softseg.nii.gz} | 0 ...json => sub-tokyo750w06_rec-average_dwi_label-SC_softseg.json} | 0 ...gz => sub-tokyo750w06_rec-average_dwi_label-SC_softseg.nii.gz} | 0 ...okyo750w07_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} | 0 ...yo750w07_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} | 0 ...kyo750w07_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} | 0 ...o750w07_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz} | 0 ...json => sub-tokyo750w07_space-other_T1w_label-SC_softseg.json} | 0 ...gz => sub-tokyo750w07_space-other_T1w_label-SC_softseg.nii.gz} | 0 ...n => sub-tokyo750w07_space-other_T2star_label-SC_softseg.json} | 0 ...=> sub-tokyo750w07_space-other_T2star_label-SC_softseg.nii.gz} | 0 ...json => sub-tokyo750w07_space-other_T2w_label-SC_softseg.json} | 0 ...gz => sub-tokyo750w07_space-other_T2w_label-SC_softseg.nii.gz} | 0 ...json => sub-tokyo750w07_rec-average_dwi_label-SC_softseg.json} | 0 ...gz => sub-tokyo750w07_rec-average_dwi_label-SC_softseg.nii.gz} | 0 ...oIngenia01_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} | 0 ...ngenia01_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} | 0 ...Ingenia01_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} | 0 ...genia01_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz} | 0 ...n => sub-tokyoIngenia01_space-other_T1w_label-SC_softseg.json} | 0 ...=> sub-tokyoIngenia01_space-other_T1w_label-SC_softseg.nii.gz} | 0 ...> sub-tokyoIngenia01_space-other_T2star_label-SC_softseg.json} | 0 ...sub-tokyoIngenia01_space-other_T2star_label-SC_softseg.nii.gz} | 0 ...n => sub-tokyoIngenia01_space-other_T2w_label-SC_softseg.json} | 0 ...=> sub-tokyoIngenia01_space-other_T2w_label-SC_softseg.nii.gz} | 0 ...n => sub-tokyoIngenia01_rec-average_dwi_label-SC_softseg.json} | 0 ...=> sub-tokyoIngenia01_rec-average_dwi_label-SC_softseg.nii.gz} | 0 ...oIngenia02_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} | 0 ...ngenia02_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} | 0 ...Ingenia02_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} | 0 ...genia02_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz} | 0 ...n => sub-tokyoIngenia02_space-other_T1w_label-SC_softseg.json} | 0 ...=> sub-tokyoIngenia02_space-other_T1w_label-SC_softseg.nii.gz} | 0 ...> sub-tokyoIngenia02_space-other_T2star_label-SC_softseg.json} | 0 ...sub-tokyoIngenia02_space-other_T2star_label-SC_softseg.nii.gz} | 0 ...n => sub-tokyoIngenia02_space-other_T2w_label-SC_softseg.json} | 0 ...=> sub-tokyoIngenia02_space-other_T2w_label-SC_softseg.nii.gz} | 0 ...n => sub-tokyoIngenia02_rec-average_dwi_label-SC_softseg.json} | 0 ...=> sub-tokyoIngenia02_rec-average_dwi_label-SC_softseg.nii.gz} | 0 ...oIngenia03_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} | 0 ...ngenia03_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} | 0 ...Ingenia03_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} | 0 ...genia03_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz} | 0 ...n => sub-tokyoIngenia03_space-other_T1w_label-SC_softseg.json} | 0 ...=> sub-tokyoIngenia03_space-other_T1w_label-SC_softseg.nii.gz} | 0 ...> sub-tokyoIngenia03_space-other_T2star_label-SC_softseg.json} | 0 ...sub-tokyoIngenia03_space-other_T2star_label-SC_softseg.nii.gz} | 0 ...n => sub-tokyoIngenia03_space-other_T2w_label-SC_softseg.json} | 0 ...=> sub-tokyoIngenia03_space-other_T2w_label-SC_softseg.nii.gz} | 0 ...n => sub-tokyoIngenia03_rec-average_dwi_label-SC_softseg.json} | 0 ...=> sub-tokyoIngenia03_rec-average_dwi_label-SC_softseg.nii.gz} | 0 ...oIngenia04_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} | 0 ...ngenia04_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} | 0 ...Ingenia04_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} | 0 ...genia04_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz} | 0 ...n => sub-tokyoIngenia04_space-other_T1w_label-SC_softseg.json} | 0 ...=> sub-tokyoIngenia04_space-other_T1w_label-SC_softseg.nii.gz} | 0 ...> sub-tokyoIngenia04_space-other_T2star_label-SC_softseg.json} | 0 ...sub-tokyoIngenia04_space-other_T2star_label-SC_softseg.nii.gz} | 0 ...n => sub-tokyoIngenia04_space-other_T2w_label-SC_softseg.json} | 0 ...=> sub-tokyoIngenia04_space-other_T2w_label-SC_softseg.nii.gz} | 0 ...n => sub-tokyoIngenia04_rec-average_dwi_label-SC_softseg.json} | 0 ...=> sub-tokyoIngenia04_rec-average_dwi_label-SC_softseg.nii.gz} | 0 ...oIngenia05_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} | 0 ...ngenia05_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} | 0 ...Ingenia05_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} | 0 ...genia05_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz} | 0 ...n => sub-tokyoIngenia05_space-other_T1w_label-SC_softseg.json} | 0 ...=> sub-tokyoIngenia05_space-other_T1w_label-SC_softseg.nii.gz} | 0 ...> sub-tokyoIngenia05_space-other_T2star_label-SC_softseg.json} | 0 ...sub-tokyoIngenia05_space-other_T2star_label-SC_softseg.nii.gz} | 0 ...n => sub-tokyoIngenia05_space-other_T2w_label-SC_softseg.json} | 0 ...=> sub-tokyoIngenia05_space-other_T2w_label-SC_softseg.nii.gz} | 0 ...n => sub-tokyoIngenia05_rec-average_dwi_label-SC_softseg.json} | 0 ...=> sub-tokyoIngenia05_rec-average_dwi_label-SC_softseg.nii.gz} | 0 ...oIngenia06_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} | 0 ...ngenia06_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} | 0 ...Ingenia06_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} | 0 ...genia06_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz} | 0 ...n => sub-tokyoIngenia06_space-other_T1w_label-SC_softseg.json} | 0 ...=> sub-tokyoIngenia06_space-other_T1w_label-SC_softseg.nii.gz} | 0 ...> sub-tokyoIngenia06_space-other_T2star_label-SC_softseg.json} | 0 ...sub-tokyoIngenia06_space-other_T2star_label-SC_softseg.nii.gz} | 0 ...n => sub-tokyoIngenia06_space-other_T2w_label-SC_softseg.json} | 0 ...=> sub-tokyoIngenia06_space-other_T2w_label-SC_softseg.nii.gz} | 0 ...n => sub-tokyoIngenia06_rec-average_dwi_label-SC_softseg.json} | 0 ...=> sub-tokyoIngenia06_rec-average_dwi_label-SC_softseg.nii.gz} | 0 ...oIngenia07_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} | 0 ...ngenia07_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} | 0 ...Ingenia07_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} | 0 ...genia07_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz} | 0 ...n => sub-tokyoIngenia07_space-other_T1w_label-SC_softseg.json} | 0 ...=> sub-tokyoIngenia07_space-other_T1w_label-SC_softseg.nii.gz} | 0 ...> sub-tokyoIngenia07_space-other_T2star_label-SC_softseg.json} | 0 ...sub-tokyoIngenia07_space-other_T2star_label-SC_softseg.nii.gz} | 0 ...n => sub-tokyoIngenia07_space-other_T2w_label-SC_softseg.json} | 0 ...=> sub-tokyoIngenia07_space-other_T2w_label-SC_softseg.nii.gz} | 0 ...n => sub-tokyoIngenia07_rec-average_dwi_label-SC_softseg.json} | 0 ...=> sub-tokyoIngenia07_rec-average_dwi_label-SC_softseg.nii.gz} | 0 ...kyoSkyra01_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} | 0 ...oSkyra01_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} | 0 ...yoSkyra01_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} | 0 ...Skyra01_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz} | 0 ...son => sub-tokyoSkyra01_space-other_T1w_label-SC_softseg.json} | 0 ...z => sub-tokyoSkyra01_space-other_T1w_label-SC_softseg.nii.gz} | 0 ... => sub-tokyoSkyra01_space-other_T2star_label-SC_softseg.json} | 0 ...> sub-tokyoSkyra01_space-other_T2star_label-SC_softseg.nii.gz} | 0 ...son => sub-tokyoSkyra01_space-other_T2w_label-SC_softseg.json} | 0 ...z => sub-tokyoSkyra01_space-other_T2w_label-SC_softseg.nii.gz} | 0 ...son => sub-tokyoSkyra01_rec-average_dwi_label-SC_softseg.json} | 0 ...z => sub-tokyoSkyra01_rec-average_dwi_label-SC_softseg.nii.gz} | 0 ...kyoSkyra02_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} | 0 ...oSkyra02_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} | 0 ...yoSkyra02_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} | 0 ...Skyra02_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz} | 0 ...son => sub-tokyoSkyra02_space-other_T1w_label-SC_softseg.json} | 0 ...z => sub-tokyoSkyra02_space-other_T1w_label-SC_softseg.nii.gz} | 0 ... => sub-tokyoSkyra02_space-other_T2star_label-SC_softseg.json} | 0 ...> sub-tokyoSkyra02_space-other_T2star_label-SC_softseg.nii.gz} | 0 ...son => sub-tokyoSkyra02_space-other_T2w_label-SC_softseg.json} | 0 ...z => sub-tokyoSkyra02_space-other_T2w_label-SC_softseg.nii.gz} | 0 ...son => sub-tokyoSkyra02_rec-average_dwi_label-SC_softseg.json} | 0 ...z => sub-tokyoSkyra02_rec-average_dwi_label-SC_softseg.nii.gz} | 0 ...kyoSkyra03_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} | 0 ...oSkyra03_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} | 0 ...yoSkyra03_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} | 0 ...Skyra03_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz} | 0 ...son => sub-tokyoSkyra03_space-other_T1w_label-SC_softseg.json} | 0 ...z => sub-tokyoSkyra03_space-other_T1w_label-SC_softseg.nii.gz} | 0 ... => sub-tokyoSkyra03_space-other_T2star_label-SC_softseg.json} | 0 ...> sub-tokyoSkyra03_space-other_T2star_label-SC_softseg.nii.gz} | 0 ...son => sub-tokyoSkyra03_space-other_T2w_label-SC_softseg.json} | 0 ...z => sub-tokyoSkyra03_space-other_T2w_label-SC_softseg.nii.gz} | 0 ...son => sub-tokyoSkyra03_rec-average_dwi_label-SC_softseg.json} | 0 ...z => sub-tokyoSkyra03_rec-average_dwi_label-SC_softseg.nii.gz} | 0 ...kyoSkyra04_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} | 0 ...oSkyra04_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} | 0 ...yoSkyra04_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} | 0 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sub-tokyoSkyra05_space-other_T1w_label-SC_softseg.nii.gz} | 0 ... => sub-tokyoSkyra05_space-other_T2star_label-SC_softseg.json} | 0 ...> sub-tokyoSkyra05_space-other_T2star_label-SC_softseg.nii.gz} | 0 ...son => sub-tokyoSkyra05_space-other_T2w_label-SC_softseg.json} | 0 ...z => sub-tokyoSkyra05_space-other_T2w_label-SC_softseg.nii.gz} | 0 ...son => sub-tokyoSkyra05_rec-average_dwi_label-SC_softseg.json} | 0 ...z => sub-tokyoSkyra05_rec-average_dwi_label-SC_softseg.nii.gz} | 0 ...kyoSkyra06_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} | 0 ...oSkyra06_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} | 0 ...yoSkyra06_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} | 0 ...Skyra06_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz} | 0 ...son => sub-tokyoSkyra06_space-other_T1w_label-SC_softseg.json} | 0 ...z => sub-tokyoSkyra06_space-other_T1w_label-SC_softseg.nii.gz} | 0 ... => sub-tokyoSkyra06_space-other_T2star_label-SC_softseg.json} | 0 ...> sub-tokyoSkyra06_space-other_T2star_label-SC_softseg.nii.gz} | 0 ...son => sub-tokyoSkyra06_space-other_T2w_label-SC_softseg.json} | 0 ...z => sub-tokyoSkyra06_space-other_T2w_label-SC_softseg.nii.gz} | 0 ...son => sub-tokyoSkyra06_rec-average_dwi_label-SC_softseg.json} | 0 ...z => sub-tokyoSkyra06_rec-average_dwi_label-SC_softseg.nii.gz} | 0 ...kyoSkyra07_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} | 0 ...oSkyra07_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} | 0 ...yoSkyra07_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} | 0 ...Skyra07_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz} | 0 ...son => sub-tokyoSkyra07_space-other_T1w_label-SC_softseg.json} | 0 ...z => sub-tokyoSkyra07_space-other_T1w_label-SC_softseg.nii.gz} | 0 ... => sub-tokyoSkyra07_space-other_T2star_label-SC_softseg.json} | 0 ...> sub-tokyoSkyra07_space-other_T2star_label-SC_softseg.nii.gz} | 0 ...son => sub-tokyoSkyra07_space-other_T2w_label-SC_softseg.json} | 0 ...z => 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sub-vallHebron03_space-other_T2w_label-SC_softseg.nii.gz} | 0 ...son => sub-vallHebron03_rec-average_dwi_label-SC_softseg.json} | 0 ...z => sub-vallHebron03_rec-average_dwi_label-SC_softseg.nii.gz} | 0 ...llHebron04_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} | 0 ...Hebron04_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} | 0 ...lHebron04_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} | 0 ...ebron04_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz} | 0 ...son => sub-vallHebron04_space-other_T1w_label-SC_softseg.json} | 0 ...z => sub-vallHebron04_space-other_T1w_label-SC_softseg.nii.gz} | 0 ... => sub-vallHebron04_space-other_T2star_label-SC_softseg.json} | 0 ...> sub-vallHebron04_space-other_T2star_label-SC_softseg.nii.gz} | 0 ...son => sub-vallHebron04_space-other_T2w_label-SC_softseg.json} | 0 ...z => sub-vallHebron04_space-other_T2w_label-SC_softseg.nii.gz} | 0 ...son => sub-vallHebron04_rec-average_dwi_label-SC_softseg.json} | 0 ...z => 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sub-vuiisAchieva01_space-other_T1w_label-SC_softseg.nii.gz} | 0 ...> sub-vuiisAchieva01_space-other_T2star_label-SC_softseg.json} | 0 ...sub-vuiisAchieva01_space-other_T2star_label-SC_softseg.nii.gz} | 0 ...n => sub-vuiisAchieva01_space-other_T2w_label-SC_softseg.json} | 0 ...=> sub-vuiisAchieva01_space-other_T2w_label-SC_softseg.nii.gz} | 0 ...n => sub-vuiisAchieva01_rec-average_dwi_label-SC_softseg.json} | 0 ...=> sub-vuiisAchieva01_rec-average_dwi_label-SC_softseg.nii.gz} | 0 ...sAchieva02_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} | 0 ...chieva02_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} | 0 ...Achieva02_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} | 0 ...hieva02_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz} | 0 ...n => sub-vuiisAchieva02_space-other_T1w_label-SC_softseg.json} | 0 ...=> sub-vuiisAchieva02_space-other_T1w_label-SC_softseg.nii.gz} | 0 ...> sub-vuiisAchieva02_space-other_T2star_label-SC_softseg.json} | 0 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...chieva06_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} | 0 ...Achieva06_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} | 0 ...hieva06_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz} | 0 ...n => sub-vuiisAchieva06_space-other_T1w_label-SC_softseg.json} | 0 ...=> sub-vuiisAchieva06_space-other_T1w_label-SC_softseg.nii.gz} | 0 ...> sub-vuiisAchieva06_space-other_T2star_label-SC_softseg.json} | 0 ...sub-vuiisAchieva06_space-other_T2star_label-SC_softseg.nii.gz} | 0 ...n => sub-vuiisAchieva06_space-other_T2w_label-SC_softseg.json} | 0 ...=> sub-vuiisAchieva06_space-other_T2w_label-SC_softseg.nii.gz} | 0 ...n => sub-vuiisAchieva06_rec-average_dwi_label-SC_softseg.json} | 0 ...=> sub-vuiisAchieva06_rec-average_dwi_label-SC_softseg.nii.gz} | 0 ...sIngenia01_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} | 0 ...ngenia01_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} | 0 ...Ingenia01_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} | 0 ...genia01_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz} | 0 ...n => sub-vuiisIngenia01_space-other_T1w_label-SC_softseg.json} | 0 ...=> sub-vuiisIngenia01_space-other_T1w_label-SC_softseg.nii.gz} | 0 ...> sub-vuiisIngenia01_space-other_T2star_label-SC_softseg.json} | 0 ...sub-vuiisIngenia01_space-other_T2star_label-SC_softseg.nii.gz} | 0 ...n => sub-vuiisIngenia01_space-other_T2w_label-SC_softseg.json} | 0 ...=> sub-vuiisIngenia01_space-other_T2w_label-SC_softseg.nii.gz} | 0 ...n => sub-vuiisIngenia01_rec-average_dwi_label-SC_softseg.json} | 0 ...=> sub-vuiisIngenia01_rec-average_dwi_label-SC_softseg.nii.gz} | 0 ...sIngenia02_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} | 0 ...ngenia02_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} | 0 ...Ingenia02_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} | 0 ...genia02_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz} | 0 ...n => sub-vuiisIngenia02_space-other_T1w_label-SC_softseg.json} | 0 ...=> sub-vuiisIngenia02_space-other_T1w_label-SC_softseg.nii.gz} | 0 ...> sub-vuiisIngenia02_space-other_T2star_label-SC_softseg.json} | 0 ...sub-vuiisIngenia02_space-other_T2star_label-SC_softseg.nii.gz} | 0 ...n => sub-vuiisIngenia02_space-other_T2w_label-SC_softseg.json} | 0 ...=> sub-vuiisIngenia02_space-other_T2w_label-SC_softseg.nii.gz} | 0 ...n => sub-vuiisIngenia02_rec-average_dwi_label-SC_softseg.json} | 0 ...=> sub-vuiisIngenia02_rec-average_dwi_label-SC_softseg.nii.gz} | 0 ...sIngenia03_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} | 0 ...ngenia03_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} | 0 ...Ingenia03_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} | 0 ...genia03_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz} | 0 ...n => sub-vuiisIngenia03_space-other_T1w_label-SC_softseg.json} | 0 ...=> sub-vuiisIngenia03_space-other_T1w_label-SC_softseg.nii.gz} | 0 ...> sub-vuiisIngenia03_space-other_T2star_label-SC_softseg.json} | 0 ...sub-vuiisIngenia03_space-other_T2star_label-SC_softseg.nii.gz} | 0 ...n => sub-vuiisIngenia03_space-other_T2w_label-SC_softseg.json} | 0 ...=> sub-vuiisIngenia03_space-other_T2w_label-SC_softseg.nii.gz} | 0 ...n => sub-vuiisIngenia03_rec-average_dwi_label-SC_softseg.json} | 0 ...=> sub-vuiisIngenia03_rec-average_dwi_label-SC_softseg.nii.gz} | 0 ...sIngenia04_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} | 0 ...ngenia04_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} | 0 ...Ingenia04_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} | 0 ...genia04_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz} | 0 ...n => sub-vuiisIngenia04_space-other_T1w_label-SC_softseg.json} | 0 ...=> sub-vuiisIngenia04_space-other_T1w_label-SC_softseg.nii.gz} | 0 ...> sub-vuiisIngenia04_space-other_T2star_label-SC_softseg.json} | 0 ...sub-vuiisIngenia04_space-other_T2star_label-SC_softseg.nii.gz} | 0 ...n => sub-vuiisIngenia04_space-other_T2w_label-SC_softseg.json} | 0 ...=> sub-vuiisIngenia04_space-other_T2w_label-SC_softseg.nii.gz} | 0 ...n => sub-vuiisIngenia04_rec-average_dwi_label-SC_softseg.json} | 0 ...=> sub-vuiisIngenia04_rec-average_dwi_label-SC_softseg.nii.gz} | 0 ...sIngenia05_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} | 0 ...ngenia05_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} | 0 ...Ingenia05_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} | 0 ...genia05_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz} | 0 ...n => sub-vuiisIngenia05_space-other_T1w_label-SC_softseg.json} | 0 ...=> sub-vuiisIngenia05_space-other_T1w_label-SC_softseg.nii.gz} | 0 ...> sub-vuiisIngenia05_space-other_T2star_label-SC_softseg.json} | 0 ...sub-vuiisIngenia05_space-other_T2star_label-SC_softseg.nii.gz} | 0 ...n => sub-vuiisIngenia05_space-other_T2w_label-SC_softseg.json} | 0 ...=> sub-vuiisIngenia05_space-other_T2w_label-SC_softseg.nii.gz} | 0 ...n => sub-vuiisIngenia05_rec-average_dwi_label-SC_softseg.json} | 0 ...=> 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...flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} | 0 ..._flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} | 0 ...lip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} | 0 ...n => sub-amu01_space-other_T1w_desc-softseg_label-SC_seg.json} | 0 ...=> sub-amu01_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} | 0 ...> sub-amu01_space-other_T2star_desc-softseg_label-SC_seg.json} | 0 ...sub-amu01_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} | 0 ...n => sub-amu01_space-other_T2w_desc-softseg_label-SC_seg.json} | 0 ...=> sub-amu01_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} | 0 ...n => sub-amu01_rec-average_dwi_desc-softseg_label-SC_seg.json} | 0 ...=> sub-amu01_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} | 0 ...2_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} | 0 ...flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} | 0 ..._flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} | 0 ...lip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} | 0 ...n => sub-amu02_space-other_T1w_desc-softseg_label-SC_seg.json} | 0 ...=> sub-amu02_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} | 0 ...> sub-amu02_space-other_T2star_desc-softseg_label-SC_seg.json} | 0 ...sub-amu02_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} | 0 ...n => sub-amu02_space-other_T2w_desc-softseg_label-SC_seg.json} | 0 ...=> sub-amu02_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} | 0 ...n => sub-amu02_rec-average_dwi_desc-softseg_label-SC_seg.json} | 0 ...=> sub-amu02_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} | 0 ...3_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} | 0 ...flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} | 0 ..._flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} | 0 ...lip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} | 0 ...n => sub-amu03_space-other_T1w_desc-softseg_label-SC_seg.json} | 0 ...=> 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...ub-brnoUhb05_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} | 0 ...b-brnoUhb05_space-other_T2star_desc-softseg_label-SC_seg.json} | 0 ...brnoUhb05_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} | 0 ... sub-brnoUhb05_space-other_T2w_desc-softseg_label-SC_seg.json} | 0 ...ub-brnoUhb05_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} | 0 ... sub-brnoUhb05_rec-average_dwi_desc-softseg_label-SC_seg.json} | 0 ...ub-brnoUhb05_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} | 0 ...6_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} | 0 ...flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} | 0 ..._flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} | 0 ...lip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} | 0 ... sub-brnoUhb06_space-other_T1w_desc-softseg_label-SC_seg.json} | 0 ...ub-brnoUhb06_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} | 0 ...b-brnoUhb06_space-other_T2star_desc-softseg_label-SC_seg.json} | 0 ...brnoUhb06_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} | 0 ... sub-brnoUhb06_space-other_T2w_desc-softseg_label-SC_seg.json} | 0 ...ub-brnoUhb06_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} | 0 ... sub-brnoUhb06_rec-average_dwi_desc-softseg_label-SC_seg.json} | 0 ...ub-brnoUhb06_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} | 0 ...1_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} | 0 ...flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} | 0 ..._flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} | 0 ...lip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} | 0 ... sub-cardiff01_space-other_T1w_desc-softseg_label-SC_seg.json} | 0 ...ub-cardiff01_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} | 0 ...b-cardiff01_space-other_T2star_desc-softseg_label-SC_seg.json} | 0 ...cardiff01_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} | 0 ... sub-cardiff01_space-other_T2w_desc-softseg_label-SC_seg.json} | 0 ...ub-cardiff01_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} | 0 ... sub-cardiff01_rec-average_dwi_desc-softseg_label-SC_seg.json} | 0 ...ub-cardiff01_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} | 0 ...2_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} | 0 ...flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} | 0 ..._flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} | 0 ...lip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} | 0 ... sub-cardiff02_space-other_T1w_desc-softseg_label-SC_seg.json} | 0 ...ub-cardiff02_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} | 0 ...b-cardiff02_space-other_T2star_desc-softseg_label-SC_seg.json} | 0 ...cardiff02_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} | 0 ... sub-cardiff02_space-other_T2w_desc-softseg_label-SC_seg.json} | 0 ...ub-cardiff02_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} | 0 ... sub-cardiff02_rec-average_dwi_desc-softseg_label-SC_seg.json} | 0 ...ub-cardiff02_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} | 0 ...3_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} | 0 ...flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} | 0 ..._flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} | 0 ...lip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} | 0 ... sub-cardiff03_space-other_T1w_desc-softseg_label-SC_seg.json} | 0 ...ub-cardiff03_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} | 0 ...b-cardiff03_space-other_T2star_desc-softseg_label-SC_seg.json} | 0 ...cardiff03_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} | 0 ... sub-cardiff03_space-other_T2w_desc-softseg_label-SC_seg.json} | 0 ...ub-cardiff03_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} | 0 ... sub-cardiff03_rec-average_dwi_desc-softseg_label-SC_seg.json} | 0 ...ub-cardiff03_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} | 0 ...4_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} | 0 ...flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} | 0 ..._flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} | 0 ...lip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} | 0 ... sub-cardiff04_space-other_T1w_desc-softseg_label-SC_seg.json} | 0 ...ub-cardiff04_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} | 0 ...b-cardiff04_space-other_T2star_desc-softseg_label-SC_seg.json} | 0 ...cardiff04_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} | 0 ... sub-cardiff04_space-other_T2w_desc-softseg_label-SC_seg.json} | 0 ...ub-cardiff04_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} | 0 ... sub-cardiff04_rec-average_dwi_desc-softseg_label-SC_seg.json} | 0 ...ub-cardiff04_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} | 0 ...5_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} | 0 ...flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} | 0 ..._flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} | 0 ...lip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} | 0 ... sub-cardiff05_space-other_T1w_desc-softseg_label-SC_seg.json} | 0 ...ub-cardiff05_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} | 0 ...b-cardiff05_space-other_T2star_desc-softseg_label-SC_seg.json} | 0 ...cardiff05_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} | 0 ... sub-cardiff05_space-other_T2w_desc-softseg_label-SC_seg.json} | 0 ...ub-cardiff05_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} | 0 ... sub-cardiff05_rec-average_dwi_desc-softseg_label-SC_seg.json} | 0 ...ub-cardiff05_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} | 0 ...6_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} | 0 ...flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} | 0 ..._flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} | 0 ...lip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} | 0 ... sub-cardiff06_space-other_T1w_desc-softseg_label-SC_seg.json} | 0 ...ub-cardiff06_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} | 0 ...b-cardiff06_space-other_T2star_desc-softseg_label-SC_seg.json} | 0 ...cardiff06_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} | 0 ... sub-cardiff06_space-other_T2w_desc-softseg_label-SC_seg.json} | 0 ...ub-cardiff06_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} | 0 ... sub-cardiff06_rec-average_dwi_desc-softseg_label-SC_seg.json} | 0 ...ub-cardiff06_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} | 0 ...1_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} | 0 ...flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} | 0 ..._flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} | 0 ...lip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} | 0 ...=> sub-cmrra01_space-other_T1w_desc-softseg_label-SC_seg.json} | 0 ... sub-cmrra01_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} | 0 ...sub-cmrra01_space-other_T2star_desc-softseg_label-SC_seg.json} | 0 ...b-cmrra01_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} | 0 ...=> sub-cmrra01_space-other_T2w_desc-softseg_label-SC_seg.json} | 0 ... sub-cmrra01_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} | 0 ...=> sub-cmrra01_rec-average_dwi_desc-softseg_label-SC_seg.json} | 0 ... sub-cmrra01_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} | 0 ...2_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} | 0 ...flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} | 0 ..._flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} | 0 ...lip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} | 0 ...=> sub-cmrra02_space-other_T1w_desc-softseg_label-SC_seg.json} | 0 ... sub-cmrra02_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} | 0 ...sub-cmrra02_space-other_T2star_desc-softseg_label-SC_seg.json} | 0 ...b-cmrra02_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} | 0 ...=> sub-cmrra02_space-other_T2w_desc-softseg_label-SC_seg.json} | 0 ... sub-cmrra02_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} | 0 ...=> sub-cmrra02_rec-average_dwi_desc-softseg_label-SC_seg.json} | 0 ... sub-cmrra02_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} | 0 ...3_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} | 0 ...flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} | 0 ..._flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} | 0 ...lip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} | 0 ...=> sub-cmrra03_space-other_T1w_desc-softseg_label-SC_seg.json} | 0 ... sub-cmrra03_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} | 0 ...sub-cmrra03_space-other_T2star_desc-softseg_label-SC_seg.json} | 0 ...b-cmrra03_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} | 0 ...=> sub-cmrra03_space-other_T2w_desc-softseg_label-SC_seg.json} | 0 ... sub-cmrra03_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} | 0 ...=> sub-cmrra03_rec-average_dwi_desc-softseg_label-SC_seg.json} | 0 ... sub-cmrra03_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} | 0 ...4_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} | 0 ...flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} | 0 ..._flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} | 0 ...lip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} | 0 ...=> sub-cmrra04_space-other_T1w_desc-softseg_label-SC_seg.json} | 0 ... sub-cmrra04_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} | 0 ...sub-cmrra04_space-other_T2star_desc-softseg_label-SC_seg.json} | 0 ...b-cmrra04_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} | 0 ...=> sub-cmrra04_space-other_T2w_desc-softseg_label-SC_seg.json} | 0 ... sub-cmrra04_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} | 0 ...=> sub-cmrra04_rec-average_dwi_desc-softseg_label-SC_seg.json} | 0 ... sub-cmrra04_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} | 0 ...5_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} | 0 ...flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} | 0 ..._flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} | 0 ...lip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} | 0 ...=> sub-cmrra05_space-other_T1w_desc-softseg_label-SC_seg.json} | 0 ... sub-cmrra05_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} | 0 ...sub-cmrra05_space-other_T2star_desc-softseg_label-SC_seg.json} | 0 ...b-cmrra05_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} | 0 ...=> sub-cmrra05_space-other_T2w_desc-softseg_label-SC_seg.json} | 0 ... sub-cmrra05_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} | 0 ...=> sub-cmrra05_rec-average_dwi_desc-softseg_label-SC_seg.json} | 0 ... sub-cmrra05_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} | 0 ...6_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} | 0 ...flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} | 0 ..._flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} | 0 ...lip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} | 0 ...=> sub-cmrra06_space-other_T1w_desc-softseg_label-SC_seg.json} | 0 ... sub-cmrra06_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} | 0 ...sub-cmrra06_space-other_T2star_desc-softseg_label-SC_seg.json} | 0 ...b-cmrra06_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} | 0 ...=> sub-cmrra06_space-other_T2w_desc-softseg_label-SC_seg.json} | 0 ... sub-cmrra06_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} | 0 ...=> sub-cmrra06_rec-average_dwi_desc-softseg_label-SC_seg.json} | 0 ... sub-cmrra06_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} | 0 ...1_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} | 0 ...flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} | 0 ..._flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} | 0 ...lip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} | 0 ...=> sub-cmrrb01_space-other_T1w_desc-softseg_label-SC_seg.json} | 0 ... sub-cmrrb01_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} | 0 ...sub-cmrrb01_space-other_T2star_desc-softseg_label-SC_seg.json} | 0 ...b-cmrrb01_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} | 0 ...=> sub-cmrrb01_space-other_T2w_desc-softseg_label-SC_seg.json} | 0 ... sub-cmrrb01_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} | 0 ...=> sub-cmrrb01_rec-average_dwi_desc-softseg_label-SC_seg.json} | 0 ... sub-cmrrb01_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} | 0 ...2_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} | 0 ...flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} | 0 ..._flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} | 0 ...lip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} | 0 ...=> sub-cmrrb02_space-other_T1w_desc-softseg_label-SC_seg.json} | 0 ... sub-cmrrb02_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} | 0 ...sub-cmrrb02_space-other_T2star_desc-softseg_label-SC_seg.json} | 0 ...b-cmrrb02_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} | 0 ...=> sub-cmrrb02_space-other_T2w_desc-softseg_label-SC_seg.json} | 0 ... sub-cmrrb02_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} | 0 ...=> sub-cmrrb02_rec-average_dwi_desc-softseg_label-SC_seg.json} | 0 ... sub-cmrrb02_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} | 0 ...3_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} | 0 ...flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} | 0 ..._flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} | 0 ...lip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} | 0 ...=> sub-cmrrb03_space-other_T1w_desc-softseg_label-SC_seg.json} | 0 ... sub-cmrrb03_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} | 0 ...sub-cmrrb03_space-other_T2star_desc-softseg_label-SC_seg.json} | 0 ...b-cmrrb03_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} | 0 ...=> sub-cmrrb03_space-other_T2w_desc-softseg_label-SC_seg.json} | 0 ... sub-cmrrb03_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} | 0 ...=> sub-cmrrb03_rec-average_dwi_desc-softseg_label-SC_seg.json} | 0 ... sub-cmrrb03_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} | 0 ...4_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} | 0 ...flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} | 0 ..._flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} | 0 ...lip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} | 0 ...=> sub-cmrrb04_space-other_T1w_desc-softseg_label-SC_seg.json} | 0 ... sub-cmrrb04_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} | 0 ...sub-cmrrb04_space-other_T2star_desc-softseg_label-SC_seg.json} | 0 ...b-cmrrb04_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} | 0 ...=> sub-cmrrb04_space-other_T2w_desc-softseg_label-SC_seg.json} | 0 ... sub-cmrrb04_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} | 0 ...=> sub-cmrrb04_rec-average_dwi_desc-softseg_label-SC_seg.json} | 0 ... sub-cmrrb04_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} | 0 ...5_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} | 0 ...flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} | 0 ..._flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} | 0 ...lip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} | 0 ...=> sub-cmrrb05_space-other_T1w_desc-softseg_label-SC_seg.json} | 0 ... sub-cmrrb05_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} | 0 ...sub-cmrrb05_space-other_T2star_desc-softseg_label-SC_seg.json} | 0 ...b-cmrrb05_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} | 0 ...=> sub-cmrrb05_space-other_T2w_desc-softseg_label-SC_seg.json} | 0 ... sub-cmrrb05_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} | 0 ...=> sub-cmrrb05_rec-average_dwi_desc-softseg_label-SC_seg.json} | 0 ... sub-cmrrb05_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} | 0 ...6_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} | 0 ...flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} | 0 ..._flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} | 0 ...lip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} | 0 ...=> sub-cmrrb06_space-other_T1w_desc-softseg_label-SC_seg.json} | 0 ... sub-cmrrb06_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} | 0 ...sub-cmrrb06_space-other_T2star_desc-softseg_label-SC_seg.json} | 0 ...b-cmrrb06_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} | 0 ...=> sub-cmrrb06_space-other_T2w_desc-softseg_label-SC_seg.json} | 0 ... sub-cmrrb06_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} | 0 ...=> sub-cmrrb06_rec-average_dwi_desc-softseg_label-SC_seg.json} | 0 ... sub-cmrrb06_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} | 0 ...7_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} | 0 ...flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} | 0 ..._flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} | 0 ...lip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} | 0 ...=> sub-cmrrb07_space-other_T1w_desc-softseg_label-SC_seg.json} | 0 ... sub-cmrrb07_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} | 0 ...sub-cmrrb07_space-other_T2star_desc-softseg_label-SC_seg.json} | 0 ...b-cmrrb07_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} | 0 ...=> sub-cmrrb07_space-other_T2w_desc-softseg_label-SC_seg.json} | 0 ... sub-cmrrb07_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} | 0 ...=> sub-cmrrb07_rec-average_dwi_desc-softseg_label-SC_seg.json} | 0 ... sub-cmrrb07_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} | 0 ...1_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} | 0 ...flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} | 0 ..._flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} | 0 ...lip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} | 0 ... sub-dresden01_space-other_T1w_desc-softseg_label-SC_seg.json} | 0 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...lip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} | 0 ...n => sub-mgh03_space-other_T1w_desc-softseg_label-SC_seg.json} | 0 ...=> sub-mgh03_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} | 0 ...> sub-mgh03_space-other_T2star_desc-softseg_label-SC_seg.json} | 0 ...sub-mgh03_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} | 0 ...n => sub-mgh03_space-other_T2w_desc-softseg_label-SC_seg.json} | 0 ...=> sub-mgh03_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} | 0 ...n => sub-mgh03_rec-average_dwi_desc-softseg_label-SC_seg.json} | 0 ...=> sub-mgh03_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} | 0 ...4_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} | 0 ...flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} | 0 ..._flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} | 0 ...lip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} | 0 ...n => sub-mgh04_space-other_T1w_desc-softseg_label-SC_seg.json} | 0 ...=> sub-mgh04_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} | 0 ...> sub-mgh04_space-other_T2star_desc-softseg_label-SC_seg.json} | 0 ...sub-mgh04_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} | 0 ...n => sub-mgh04_space-other_T2w_desc-softseg_label-SC_seg.json} | 0 ...=> sub-mgh04_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} | 0 ...n => sub-mgh04_rec-average_dwi_desc-softseg_label-SC_seg.json} | 0 ...=> sub-mgh04_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} | 0 ...5_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} | 0 ...flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} | 0 ..._flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} | 0 ...lip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} | 0 ...n => sub-mgh05_space-other_T1w_desc-softseg_label-SC_seg.json} | 0 ...=> sub-mgh05_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} | 0 ...> sub-mgh05_space-other_T2star_desc-softseg_label-SC_seg.json} | 0 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sub-mgh06_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} | 0 ...n => sub-mgh06_rec-average_dwi_desc-softseg_label-SC_seg.json} | 0 ...=> sub-mgh06_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} | 0 ...1_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} | 0 ...flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} | 0 ..._flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} | 0 ...lip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} | 0 ...=> sub-milan01_space-other_T1w_desc-softseg_label-SC_seg.json} | 0 ... sub-milan01_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} | 0 ...sub-milan01_space-other_T2star_desc-softseg_label-SC_seg.json} | 0 ...b-milan01_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} | 0 ...=> sub-milan01_space-other_T2w_desc-softseg_label-SC_seg.json} | 0 ... sub-milan01_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} | 0 ...=> sub-milan01_rec-average_dwi_desc-softseg_label-SC_seg.json} | 0 ... sub-milan01_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} | 0 ...2_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} | 0 ...flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} | 0 ..._flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} | 0 ...lip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} | 0 ...=> sub-milan02_space-other_T1w_desc-softseg_label-SC_seg.json} | 0 ... sub-milan02_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} | 0 ...sub-milan02_space-other_T2star_desc-softseg_label-SC_seg.json} | 0 ...b-milan02_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} | 0 ...=> sub-milan02_space-other_T2w_desc-softseg_label-SC_seg.json} | 0 ... sub-milan02_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} | 0 ...=> sub-milan02_rec-average_dwi_desc-softseg_label-SC_seg.json} | 0 ... sub-milan02_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} | 0 ...3_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} | 0 ...flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} | 0 ..._flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} | 0 ...lip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} | 0 ...=> sub-milan03_space-other_T1w_desc-softseg_label-SC_seg.json} | 0 ... sub-milan03_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} | 0 ...sub-milan03_space-other_T2star_desc-softseg_label-SC_seg.json} | 0 ...b-milan03_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} | 0 ...=> sub-milan03_space-other_T2w_desc-softseg_label-SC_seg.json} | 0 ... sub-milan03_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} | 0 ...=> sub-milan03_rec-average_dwi_desc-softseg_label-SC_seg.json} | 0 ... sub-milan03_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} | 0 ...4_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} | 0 ...flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} | 0 ..._flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} | 0 ...lip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} | 0 ...=> sub-milan04_space-other_T1w_desc-softseg_label-SC_seg.json} | 0 ... sub-milan04_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} | 0 ...sub-milan04_space-other_T2star_desc-softseg_label-SC_seg.json} | 0 ...b-milan04_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} | 0 ...=> sub-milan04_space-other_T2w_desc-softseg_label-SC_seg.json} | 0 ... sub-milan04_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} | 0 ...=> sub-milan04_rec-average_dwi_desc-softseg_label-SC_seg.json} | 0 ... sub-milan04_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} | 0 ...5_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} | 0 ...flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} | 0 ..._flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} | 0 ...lip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} | 0 ...=> sub-milan05_space-other_T1w_desc-softseg_label-SC_seg.json} | 0 ... sub-milan05_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} | 0 ...sub-milan05_space-other_T2star_desc-softseg_label-SC_seg.json} | 0 ...b-milan05_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} | 0 ...=> sub-milan05_space-other_T2w_desc-softseg_label-SC_seg.json} | 0 ... sub-milan05_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} | 0 ...=> sub-milan05_rec-average_dwi_desc-softseg_label-SC_seg.json} | 0 ... sub-milan05_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} | 0 ...6_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} | 0 ...flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} | 0 ..._flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} | 0 ...lip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} | 0 ...=> sub-milan06_space-other_T1w_desc-softseg_label-SC_seg.json} | 0 ... sub-milan06_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} | 0 ...sub-milan06_space-other_T2star_desc-softseg_label-SC_seg.json} | 0 ...b-milan06_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} | 0 ...=> sub-milan06_space-other_T2w_desc-softseg_label-SC_seg.json} | 0 ... sub-milan06_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} | 0 ...=> sub-milan06_rec-average_dwi_desc-softseg_label-SC_seg.json} | 0 ... sub-milan06_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} | 0 ...7_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} | 0 ...flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} | 0 ..._flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} | 0 ...lip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} | 0 ...=> sub-milan07_space-other_T1w_desc-softseg_label-SC_seg.json} | 0 ... sub-milan07_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} | 0 ...sub-milan07_space-other_T2star_desc-softseg_label-SC_seg.json} | 0 ...b-milan07_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} | 0 ...=> sub-milan07_space-other_T2w_desc-softseg_label-SC_seg.json} | 0 ... sub-milan07_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} | 0 ...=> sub-milan07_rec-average_dwi_desc-softseg_label-SC_seg.json} | 0 ... sub-milan07_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} | 0 ...1_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} | 0 ...flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} | 0 ..._flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} | 0 ...lip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} | 0 ... sub-mniPilot1_space-other_T1w_desc-softseg_label-SC_seg.json} | 0 ...ub-mniPilot1_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} | 0 ...b-mniPilot1_space-other_T2star_desc-softseg_label-SC_seg.json} | 0 ...mniPilot1_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} | 0 ... sub-mniPilot1_space-other_T2w_desc-softseg_label-SC_seg.json} | 0 ...ub-mniPilot1_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} | 0 ... sub-mniPilot1_rec-average_dwi_desc-softseg_label-SC_seg.json} | 0 ...ub-mniPilot1_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} | 0 ...1_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} | 0 ...flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} | 0 ..._flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} | 0 ...lip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} | 0 ... => sub-mniS01_space-other_T1w_desc-softseg_label-SC_seg.json} | 0 ...> sub-mniS01_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} | 0 ... sub-mniS01_space-other_T2star_desc-softseg_label-SC_seg.json} | 0 ...ub-mniS01_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} | 0 ... => sub-mniS01_space-other_T2w_desc-softseg_label-SC_seg.json} | 0 ...> sub-mniS01_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} | 0 ... => sub-mniS01_rec-average_dwi_desc-softseg_label-SC_seg.json} | 0 ...> sub-mniS01_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} | 0 ...2_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} | 0 ...flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} | 0 ..._flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} | 0 ...lip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} | 0 ... => sub-mniS02_space-other_T1w_desc-softseg_label-SC_seg.json} | 0 ...> sub-mniS02_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} | 0 ... sub-mniS02_space-other_T2star_desc-softseg_label-SC_seg.json} | 0 ...ub-mniS02_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} | 0 ... => sub-mniS02_space-other_T2w_desc-softseg_label-SC_seg.json} | 0 ...> sub-mniS02_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} | 0 ... => sub-mniS02_rec-average_dwi_desc-softseg_label-SC_seg.json} | 0 ...> sub-mniS02_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} | 0 ...3_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} | 0 ...flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} | 0 ..._flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} | 0 ...lip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} | 0 ... => sub-mniS03_space-other_T1w_desc-softseg_label-SC_seg.json} | 0 ...> sub-mniS03_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} | 0 ... sub-mniS03_space-other_T2star_desc-softseg_label-SC_seg.json} | 0 ...ub-mniS03_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} | 0 ... => sub-mniS03_space-other_T2w_desc-softseg_label-SC_seg.json} | 0 ...> sub-mniS03_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} | 0 ... => sub-mniS03_rec-average_dwi_desc-softseg_label-SC_seg.json} | 0 ...> sub-mniS03_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} | 0 ...4_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} | 0 ...flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} | 0 ..._flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} | 0 ...lip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} | 0 ... => sub-mniS04_space-other_T1w_desc-softseg_label-SC_seg.json} | 0 ...> sub-mniS04_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} | 0 ... sub-mniS04_space-other_T2star_desc-softseg_label-SC_seg.json} | 0 ...ub-mniS04_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} | 0 ... => sub-mniS04_space-other_T2w_desc-softseg_label-SC_seg.json} | 0 ...> sub-mniS04_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} | 0 ... => sub-mniS04_rec-average_dwi_desc-softseg_label-SC_seg.json} | 0 ...> sub-mniS04_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} | 0 ...5_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} | 0 ...flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} | 0 ..._flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} | 0 ...lip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} | 0 ... => sub-mniS05_space-other_T1w_desc-softseg_label-SC_seg.json} | 0 ...> sub-mniS05_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} | 0 ... sub-mniS05_space-other_T2star_desc-softseg_label-SC_seg.json} | 0 ...ub-mniS05_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} | 0 ... => sub-mniS05_space-other_T2w_desc-softseg_label-SC_seg.json} | 0 ...> sub-mniS05_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} | 0 ... => sub-mniS05_rec-average_dwi_desc-softseg_label-SC_seg.json} | 0 ...> sub-mniS05_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} | 0 ...6_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} | 0 ...flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} | 0 ..._flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} | 0 ...lip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} | 0 ... => sub-mniS06_space-other_T1w_desc-softseg_label-SC_seg.json} | 0 ...> sub-mniS06_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} | 0 ... sub-mniS06_space-other_T2star_desc-softseg_label-SC_seg.json} | 0 ...ub-mniS06_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} | 0 ... => sub-mniS06_space-other_T2w_desc-softseg_label-SC_seg.json} | 0 ...> sub-mniS06_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} | 0 ... => sub-mniS06_rec-average_dwi_desc-softseg_label-SC_seg.json} | 0 ...> sub-mniS06_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} | 0 ...7_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} | 0 ...flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} | 0 ..._flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} | 0 ...lip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} | 0 ... => sub-mniS07_space-other_T1w_desc-softseg_label-SC_seg.json} | 0 ...> sub-mniS07_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} | 0 ... sub-mniS07_space-other_T2star_desc-softseg_label-SC_seg.json} | 0 ...ub-mniS07_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} | 0 ... => sub-mniS07_space-other_T2w_desc-softseg_label-SC_seg.json} | 0 ...> sub-mniS07_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} | 0 ... => sub-mniS07_rec-average_dwi_desc-softseg_label-SC_seg.json} | 0 ...> sub-mniS07_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} | 0 ...8_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} | 0 ...flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} | 0 ..._flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} | 0 ...lip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} | 0 ... => sub-mniS08_space-other_T1w_desc-softseg_label-SC_seg.json} | 0 ...> sub-mniS08_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} | 0 ... sub-mniS08_space-other_T2star_desc-softseg_label-SC_seg.json} | 0 ...ub-mniS08_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} | 0 ... => sub-mniS08_space-other_T2w_desc-softseg_label-SC_seg.json} | 0 ...> sub-mniS08_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} | 0 ... => sub-mniS08_rec-average_dwi_desc-softseg_label-SC_seg.json} | 0 ...> sub-mniS08_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} | 0 ...9_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} | 0 ...flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} | 0 ..._flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} | 0 ...lip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} | 0 ... => sub-mniS09_space-other_T1w_desc-softseg_label-SC_seg.json} | 0 ...> sub-mniS09_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} | 0 ... sub-mniS09_space-other_T2star_desc-softseg_label-SC_seg.json} | 0 ...ub-mniS09_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} | 0 ... => sub-mniS09_space-other_T2w_desc-softseg_label-SC_seg.json} | 0 ...> sub-mniS09_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} | 0 ... => sub-mniS09_rec-average_dwi_desc-softseg_label-SC_seg.json} | 0 ...> sub-mniS09_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} | 0 ...1_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} | 0 ...flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} | 0 ..._flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} | 0 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sub-pavia03_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} | 0 ...=> sub-pavia03_rec-average_dwi_desc-softseg_label-SC_seg.json} | 0 ... sub-pavia03_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} | 0 ...4_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} | 0 ...flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} | 0 ..._flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} | 0 ...lip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} | 0 ...=> sub-pavia04_space-other_T1w_desc-softseg_label-SC_seg.json} | 0 ... sub-pavia04_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} | 0 ...sub-pavia04_space-other_T2star_desc-softseg_label-SC_seg.json} | 0 ...b-pavia04_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} | 0 ...=> sub-pavia04_space-other_T2w_desc-softseg_label-SC_seg.json} | 0 ... sub-pavia04_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} | 0 ...=> sub-pavia04_rec-average_dwi_desc-softseg_label-SC_seg.json} | 0 ... sub-pavia04_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} | 0 ...5_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} | 0 ...flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} | 0 ..._flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} | 0 ...lip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} | 0 ...=> sub-pavia05_space-other_T1w_desc-softseg_label-SC_seg.json} | 0 ... sub-pavia05_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} | 0 ...sub-pavia05_space-other_T2star_desc-softseg_label-SC_seg.json} | 0 ...b-pavia05_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} | 0 ...=> sub-pavia05_space-other_T2w_desc-softseg_label-SC_seg.json} | 0 ... sub-pavia05_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} | 0 ...=> sub-pavia05_rec-average_dwi_desc-softseg_label-SC_seg.json} | 0 ... sub-pavia05_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} | 0 ...6_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} | 0 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sub-ubc04_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} | 0 ...5_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} | 0 ...flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} | 0 ..._flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} | 0 ...lip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} | 0 ...n => sub-ubc05_space-other_T1w_desc-softseg_label-SC_seg.json} | 0 ...=> sub-ubc05_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} | 0 ...> sub-ubc05_space-other_T2star_desc-softseg_label-SC_seg.json} | 0 ...sub-ubc05_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} | 0 ...n => sub-ubc05_space-other_T2w_desc-softseg_label-SC_seg.json} | 0 ...=> sub-ubc05_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} | 0 ...n => sub-ubc05_rec-average_dwi_desc-softseg_label-SC_seg.json} | 0 ...=> sub-ubc05_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} | 0 ...6_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} | 0 ...flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} | 0 ..._flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} | 0 ...lip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} | 0 ...n => sub-ubc06_space-other_T1w_desc-softseg_label-SC_seg.json} | 0 ...=> sub-ubc06_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} | 0 ...> sub-ubc06_space-other_T2star_desc-softseg_label-SC_seg.json} | 0 ...sub-ubc06_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} | 0 ...n => sub-ubc06_space-other_T2w_desc-softseg_label-SC_seg.json} | 0 ...=> sub-ubc06_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} | 0 ...n => sub-ubc06_rec-average_dwi_desc-softseg_label-SC_seg.json} | 0 ...=> sub-ubc06_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} | 0 ...1_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} | 0 ...flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} | 0 ..._flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} | 0 ...lip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} | 0 ...n => sub-ucl01_space-other_T1w_desc-softseg_label-SC_seg.json} | 0 ...=> sub-ucl01_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} | 0 ...> sub-ucl01_space-other_T2star_desc-softseg_label-SC_seg.json} | 0 ...sub-ucl01_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} | 0 ...n => sub-ucl01_space-other_T2w_desc-softseg_label-SC_seg.json} | 0 ...=> sub-ucl01_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} | 0 ...n => sub-ucl01_rec-average_dwi_desc-softseg_label-SC_seg.json} | 0 ...=> sub-ucl01_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} | 0 ...2_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} | 0 ...flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} | 0 ..._flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} | 0 ...lip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} | 0 ...n => sub-ucl02_space-other_T1w_desc-softseg_label-SC_seg.json} | 0 ...=> sub-ucl02_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} | 0 ...> sub-ucl02_space-other_T2star_desc-softseg_label-SC_seg.json} | 0 ...sub-ucl02_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} | 0 ...n => sub-ucl02_space-other_T2w_desc-softseg_label-SC_seg.json} | 0 ...=> sub-ucl02_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} | 0 ...n => sub-ucl02_rec-average_dwi_desc-softseg_label-SC_seg.json} | 0 ...=> sub-ucl02_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} | 0 ...3_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} | 0 ...flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} | 0 ..._flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} | 0 ...lip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} | 0 ...n => sub-ucl03_space-other_T1w_desc-softseg_label-SC_seg.json} | 0 ...=> sub-ucl03_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} | 0 ...> sub-ucl03_space-other_T2star_desc-softseg_label-SC_seg.json} | 0 ...sub-ucl03_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} | 0 ...n => sub-ucl03_space-other_T2w_desc-softseg_label-SC_seg.json} | 0 ...=> sub-ucl03_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} | 0 ...n => sub-ucl03_rec-average_dwi_desc-softseg_label-SC_seg.json} | 0 ...=> sub-ucl03_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} | 0 ...4_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} | 0 ...flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} | 0 ..._flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} | 0 ...lip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} | 0 ...n => sub-ucl04_space-other_T1w_desc-softseg_label-SC_seg.json} | 0 ...=> sub-ucl04_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} | 0 ...> sub-ucl04_space-other_T2star_desc-softseg_label-SC_seg.json} | 0 ...sub-ucl04_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} | 0 ...n => sub-ucl04_space-other_T2w_desc-softseg_label-SC_seg.json} | 0 ...=> sub-ucl04_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} | 0 ...n => sub-ucl04_rec-average_dwi_desc-softseg_label-SC_seg.json} | 0 ...=> sub-ucl04_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} | 0 ...5_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} | 0 ...flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} | 0 ..._flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} | 0 ...lip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} | 0 ...n => sub-ucl05_space-other_T1w_desc-softseg_label-SC_seg.json} | 0 ...=> sub-ucl05_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} | 0 ...> sub-ucl05_space-other_T2star_desc-softseg_label-SC_seg.json} | 0 ...sub-ucl05_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} | 0 ...n => sub-ucl05_space-other_T2w_desc-softseg_label-SC_seg.json} | 0 ...=> sub-ucl05_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} | 0 ...n => sub-ucl05_rec-average_dwi_desc-softseg_label-SC_seg.json} | 0 ...=> sub-ucl05_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} | 0 ...6_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} | 0 ...flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} | 0 ..._flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} | 0 ...lip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} | 0 ...n => sub-ucl06_space-other_T1w_desc-softseg_label-SC_seg.json} | 0 ...=> sub-ucl06_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} | 0 ...> sub-ucl06_space-other_T2star_desc-softseg_label-SC_seg.json} | 0 ...sub-ucl06_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} | 0 ...n => sub-ucl06_space-other_T2w_desc-softseg_label-SC_seg.json} | 0 ...=> sub-ucl06_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} | 0 ...n => sub-ucl06_rec-average_dwi_desc-softseg_label-SC_seg.json} | 0 ...=> sub-ucl06_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} | 0 ...1_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} | 0 ...flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} | 0 ..._flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} | 0 ...lip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} | 0 ...n => sub-unf01_space-other_T1w_desc-softseg_label-SC_seg.json} | 0 ...=> sub-unf01_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} | 0 ...> sub-unf01_space-other_T2star_desc-softseg_label-SC_seg.json} | 0 ...sub-unf01_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} | 0 ...n => sub-unf01_space-other_T2w_desc-softseg_label-SC_seg.json} | 0 ...=> sub-unf01_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} | 0 ...n => sub-unf01_rec-average_dwi_desc-softseg_label-SC_seg.json} | 0 ...=> sub-unf01_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} | 0 ...2_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} | 0 ...flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} | 0 ..._flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} | 0 ...lip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} | 0 ...n => sub-unf02_space-other_T1w_desc-softseg_label-SC_seg.json} | 0 ...=> sub-unf02_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} | 0 ...> sub-unf02_space-other_T2star_desc-softseg_label-SC_seg.json} | 0 ...sub-unf02_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} | 0 ...n => sub-unf02_space-other_T2w_desc-softseg_label-SC_seg.json} | 0 ...=> sub-unf02_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} | 0 ...n => sub-unf02_rec-average_dwi_desc-softseg_label-SC_seg.json} | 0 ...=> sub-unf02_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} | 0 ...3_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} | 0 ...flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} | 0 ..._flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} | 0 ...lip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} | 0 ...n => sub-unf03_space-other_T1w_desc-softseg_label-SC_seg.json} | 0 ...=> 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...sub-unf04_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} | 0 ...n => sub-unf04_space-other_T2w_desc-softseg_label-SC_seg.json} | 0 ...=> sub-unf04_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} | 0 ...n => sub-unf04_rec-average_dwi_desc-softseg_label-SC_seg.json} | 0 ...=> sub-unf04_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} | 0 ...5_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} | 0 ...flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} | 0 ..._flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} | 0 ...lip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} | 0 ...n => sub-unf05_space-other_T1w_desc-softseg_label-SC_seg.json} | 0 ...=> sub-unf05_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} | 0 ...> sub-unf05_space-other_T2star_desc-softseg_label-SC_seg.json} | 0 ...sub-unf05_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} | 0 ...n => sub-unf05_space-other_T2w_desc-softseg_label-SC_seg.json} | 0 ...=> 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...iisIngenia06_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} | 0 ...vuiisIngenia06_rec-average_dwi_desc-softseg_label-SC_seg.json} | 0 ...iisIngenia06_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} | 0 10258 files changed, 0 insertions(+), 0 deletions(-) rename derivatives/labels/sub-amu01/anat/{sub-amu01_flip-1_mt-on_space-other_MTS_seg-manual.json => sub-amu01_flip-1_mt-on_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-amu01/anat/{sub-amu01_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz => sub-amu01_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-amu01/anat/{sub-amu01_flip-2_mt-off_space-other_MTS_seg-manual.json => sub-amu01_flip-2_mt-off_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-amu01/anat/{sub-amu01_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz => sub-amu01_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-amu01/anat/{sub-amu01_space-other_T1w_seg-manual.json => sub-amu01_space-other_T1w_label-SC_seg.json} (100%) rename derivatives/labels/sub-amu01/anat/{sub-amu01_space-other_T1w_seg-manual.nii.gz => sub-amu01_space-other_T1w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-amu01/anat/{sub-amu01_space-other_T1w_labels-disc-manual.json => sub-amu01_space-other_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-amu01/anat/{sub-amu01_space-other_T1w_labels-disc-manual.nii.gz => sub-amu01_space-other_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-amu01/anat/{sub-amu01_space-other_T2star_seg-manual.json => sub-amu01_space-other_T2star_label-SC_seg.json} (100%) rename derivatives/labels/sub-amu01/anat/{sub-amu01_space-other_T2star_seg-manual.nii.gz => sub-amu01_space-other_T2star_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-amu01/anat/{sub-amu01_space-other_T2w_seg-manual.json => sub-amu01_space-other_T2w_label-SC_seg.json} (100%) rename derivatives/labels/sub-amu01/anat/{sub-amu01_space-other_T2w_seg-manual.nii.gz => sub-amu01_space-other_T2w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-amu01/anat/{sub-amu01_space-other_T2w_labels-disc-manual.json => sub-amu01_space-other_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-amu01/anat/{sub-amu01_space-other_T2w_labels-disc-manual.nii.gz => sub-amu01_space-other_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-amu01/dwi/{sub-amu01_rec-average_dwi_seg-manual.json => sub-amu01_rec-average_dwi_label-SC_seg.json} (100%) rename derivatives/labels/sub-amu01/dwi/{sub-amu01_rec-average_dwi_seg-manual.nii.gz => sub-amu01_rec-average_dwi_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-amu02/anat/{sub-amu02_flip-1_mt-on_space-other_MTS_seg-manual.json => sub-amu02_flip-1_mt-on_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-amu02/anat/{sub-amu02_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz => sub-amu02_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-amu02/anat/{sub-amu02_flip-2_mt-off_space-other_MTS_seg-manual.json => sub-amu02_flip-2_mt-off_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-amu02/anat/{sub-amu02_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz => sub-amu02_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-amu02/anat/{sub-amu02_space-other_T1w_seg-manual.json => sub-amu02_space-other_T1w_label-SC_seg.json} (100%) rename derivatives/labels/sub-amu02/anat/{sub-amu02_space-other_T1w_seg-manual.nii.gz => sub-amu02_space-other_T1w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-amu02/anat/{sub-amu02_space-other_T1w_labels-disc-manual.json => sub-amu02_space-other_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-amu02/anat/{sub-amu02_space-other_T1w_labels-disc-manual.nii.gz => sub-amu02_space-other_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-amu02/anat/{sub-amu02_space-other_T2star_seg-manual.json => sub-amu02_space-other_T2star_label-SC_seg.json} (100%) rename derivatives/labels/sub-amu02/anat/{sub-amu02_space-other_T2star_seg-manual.nii.gz => sub-amu02_space-other_T2star_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-amu02/anat/{sub-amu02_space-other_T2w_seg-manual.json => sub-amu02_space-other_T2w_label-SC_seg.json} (100%) rename derivatives/labels/sub-amu02/anat/{sub-amu02_space-other_T2w_seg-manual.nii.gz => sub-amu02_space-other_T2w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-amu02/anat/{sub-amu02_space-other_T2w_labels-disc-manual.json => sub-amu02_space-other_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-amu02/anat/{sub-amu02_space-other_T2w_labels-disc-manual.nii.gz => sub-amu02_space-other_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-amu02/dwi/{sub-amu02_rec-average_dwi_seg-manual.json => sub-amu02_rec-average_dwi_label-SC_seg.json} (100%) rename derivatives/labels/sub-amu02/dwi/{sub-amu02_rec-average_dwi_seg-manual.nii.gz => sub-amu02_rec-average_dwi_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-amu03/anat/{sub-amu03_flip-1_mt-on_space-other_MTS_seg-manual.json => sub-amu03_flip-1_mt-on_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-amu03/anat/{sub-amu03_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz => sub-amu03_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-amu03/anat/{sub-amu03_flip-2_mt-off_space-other_MTS_seg-manual.json => sub-amu03_flip-2_mt-off_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-amu03/anat/{sub-amu03_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz => sub-amu03_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-amu03/anat/{sub-amu03_space-other_T1w_seg-manual.json => sub-amu03_space-other_T1w_label-SC_seg.json} (100%) rename derivatives/labels/sub-amu03/anat/{sub-amu03_space-other_T1w_seg-manual.nii.gz => sub-amu03_space-other_T1w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-amu03/anat/{sub-amu03_space-other_T1w_labels-disc-manual.json => sub-amu03_space-other_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-amu03/anat/{sub-amu03_space-other_T1w_labels-disc-manual.nii.gz => sub-amu03_space-other_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-amu03/anat/{sub-amu03_space-other_T2star_seg-manual.json => sub-amu03_space-other_T2star_label-SC_seg.json} (100%) rename derivatives/labels/sub-amu03/anat/{sub-amu03_space-other_T2star_seg-manual.nii.gz => sub-amu03_space-other_T2star_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-amu03/anat/{sub-amu03_space-other_T2w_seg-manual.json => sub-amu03_space-other_T2w_label-SC_seg.json} (100%) rename derivatives/labels/sub-amu03/anat/{sub-amu03_space-other_T2w_seg-manual.nii.gz => sub-amu03_space-other_T2w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-amu03/anat/{sub-amu03_space-other_T2w_labels-disc-manual.json => sub-amu03_space-other_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-amu03/anat/{sub-amu03_space-other_T2w_labels-disc-manual.nii.gz => sub-amu03_space-other_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-amu03/dwi/{sub-amu03_rec-average_dwi_seg-manual.json => sub-amu03_rec-average_dwi_label-SC_seg.json} (100%) rename derivatives/labels/sub-amu03/dwi/{sub-amu03_rec-average_dwi_seg-manual.nii.gz => sub-amu03_rec-average_dwi_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-amu04/anat/{sub-amu04_flip-1_mt-on_space-other_MTS_seg-manual.json => sub-amu04_flip-1_mt-on_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-amu04/anat/{sub-amu04_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz => sub-amu04_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-amu04/anat/{sub-amu04_flip-2_mt-off_space-other_MTS_seg-manual.json => sub-amu04_flip-2_mt-off_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-amu04/anat/{sub-amu04_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz => sub-amu04_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-amu04/anat/{sub-amu04_space-other_T1w_seg-manual.json => sub-amu04_space-other_T1w_label-SC_seg.json} (100%) rename derivatives/labels/sub-amu04/anat/{sub-amu04_space-other_T1w_seg-manual.nii.gz => sub-amu04_space-other_T1w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-amu04/anat/{sub-amu04_space-other_T1w_labels-disc-manual.json => sub-amu04_space-other_T1w_label-discs_dlabel.json} 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sub-amu04_space-other_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-amu04/dwi/{sub-amu04_rec-average_dwi_seg-manual.json => sub-amu04_rec-average_dwi_label-SC_seg.json} (100%) rename derivatives/labels/sub-amu04/dwi/{sub-amu04_rec-average_dwi_seg-manual.nii.gz => sub-amu04_rec-average_dwi_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-amu05/anat/{sub-amu05_flip-1_mt-on_space-other_MTS_seg-manual.json => sub-amu05_flip-1_mt-on_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-amu05/anat/{sub-amu05_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz => sub-amu05_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-amu05/anat/{sub-amu05_flip-2_mt-off_space-other_MTS_seg-manual.json => sub-amu05_flip-2_mt-off_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-amu05/anat/{sub-amu05_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz => sub-amu05_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-amu05/anat/{sub-amu05_space-other_T1w_seg-manual.json => sub-amu05_space-other_T1w_label-SC_seg.json} (100%) rename derivatives/labels/sub-amu05/anat/{sub-amu05_space-other_T1w_seg-manual.nii.gz => sub-amu05_space-other_T1w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-amu05/anat/{sub-amu05_space-other_T1w_labels-disc-manual.json => sub-amu05_space-other_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-amu05/anat/{sub-amu05_space-other_T1w_labels-disc-manual.nii.gz => sub-amu05_space-other_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-amu05/anat/{sub-amu05_space-other_T2star_seg-manual.json => sub-amu05_space-other_T2star_label-SC_seg.json} (100%) rename derivatives/labels/sub-amu05/anat/{sub-amu05_space-other_T2star_seg-manual.nii.gz => sub-amu05_space-other_T2star_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-amu05/anat/{sub-amu05_space-other_T2w_seg-manual.json => sub-amu05_space-other_T2w_label-SC_seg.json} (100%) rename derivatives/labels/sub-amu05/anat/{sub-amu05_space-other_T2w_seg-manual.nii.gz => sub-amu05_space-other_T2w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-amu05/anat/{sub-amu05_space-other_T2w_labels-disc-manual.json => sub-amu05_space-other_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-amu05/anat/{sub-amu05_space-other_T2w_labels-disc-manual.nii.gz => sub-amu05_space-other_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-amu05/dwi/{sub-amu05_rec-average_dwi_seg-manual.json => sub-amu05_rec-average_dwi_label-SC_seg.json} (100%) rename derivatives/labels/sub-amu05/dwi/{sub-amu05_rec-average_dwi_seg-manual.nii.gz => sub-amu05_rec-average_dwi_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-balgrist01/anat/{sub-balgrist01_flip-1_mt-on_space-other_MTS_seg-manual.json => sub-balgrist01_flip-1_mt-on_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-balgrist01/anat/{sub-balgrist01_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz => sub-balgrist01_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-balgrist01/anat/{sub-balgrist01_flip-2_mt-off_space-other_MTS_seg-manual.json => sub-balgrist01_flip-2_mt-off_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-balgrist01/anat/{sub-balgrist01_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz => sub-balgrist01_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-balgrist01/anat/{sub-balgrist01_space-other_T1w_seg-manual.json => sub-balgrist01_space-other_T1w_label-SC_seg.json} (100%) rename derivatives/labels/sub-balgrist01/anat/{sub-balgrist01_space-other_T1w_seg-manual.nii.gz => sub-balgrist01_space-other_T1w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-balgrist01/anat/{sub-balgrist01_space-other_T1w_labels-disc-manual.json => sub-balgrist01_space-other_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-balgrist01/anat/{sub-balgrist01_space-other_T1w_labels-disc-manual.nii.gz => sub-balgrist01_space-other_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-balgrist01/anat/{sub-balgrist01_space-other_T2star_seg-manual.json => sub-balgrist01_space-other_T2star_label-SC_seg.json} (100%) rename derivatives/labels/sub-balgrist01/anat/{sub-balgrist01_space-other_T2star_seg-manual.nii.gz => sub-balgrist01_space-other_T2star_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-balgrist01/anat/{sub-balgrist01_space-other_T2w_seg-manual.json => sub-balgrist01_space-other_T2w_label-SC_seg.json} (100%) rename derivatives/labels/sub-balgrist01/anat/{sub-balgrist01_space-other_T2w_seg-manual.nii.gz => sub-balgrist01_space-other_T2w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-balgrist01/anat/{sub-balgrist01_space-other_T2w_labels-disc-manual.json => sub-balgrist01_space-other_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-balgrist01/anat/{sub-balgrist01_space-other_T2w_labels-disc-manual.nii.gz => sub-balgrist01_space-other_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-balgrist01/dwi/{sub-balgrist01_rec-average_dwi_seg-manual.json => sub-balgrist01_rec-average_dwi_label-SC_seg.json} (100%) rename derivatives/labels/sub-balgrist01/dwi/{sub-balgrist01_rec-average_dwi_seg-manual.nii.gz => sub-balgrist01_rec-average_dwi_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-balgrist02/anat/{sub-balgrist02_flip-1_mt-on_space-other_MTS_seg-manual.json => sub-balgrist02_flip-1_mt-on_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-balgrist02/anat/{sub-balgrist02_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz => sub-balgrist02_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-balgrist02/anat/{sub-balgrist02_flip-2_mt-off_space-other_MTS_seg-manual.json => sub-balgrist02_flip-2_mt-off_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-balgrist02/anat/{sub-balgrist02_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz => sub-balgrist02_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-balgrist02/anat/{sub-balgrist02_space-other_T1w_seg-manual.json => sub-balgrist02_space-other_T1w_label-SC_seg.json} (100%) rename derivatives/labels/sub-balgrist02/anat/{sub-balgrist02_space-other_T1w_seg-manual.nii.gz => sub-balgrist02_space-other_T1w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-balgrist02/anat/{sub-balgrist02_space-other_T1w_labels-disc-manual.json => sub-balgrist02_space-other_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-balgrist02/anat/{sub-balgrist02_space-other_T1w_labels-disc-manual.nii.gz => sub-balgrist02_space-other_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-balgrist02/anat/{sub-balgrist02_space-other_T2star_seg-manual.json => sub-balgrist02_space-other_T2star_label-SC_seg.json} (100%) rename derivatives/labels/sub-balgrist02/anat/{sub-balgrist02_space-other_T2star_seg-manual.nii.gz => sub-balgrist02_space-other_T2star_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-balgrist02/anat/{sub-balgrist02_space-other_T2w_seg-manual.json => sub-balgrist02_space-other_T2w_label-SC_seg.json} (100%) rename derivatives/labels/sub-balgrist02/anat/{sub-balgrist02_space-other_T2w_seg-manual.nii.gz => sub-balgrist02_space-other_T2w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-balgrist02/anat/{sub-balgrist02_space-other_T2w_labels-disc-manual.json => sub-balgrist02_space-other_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-balgrist02/anat/{sub-balgrist02_space-other_T2w_labels-disc-manual.nii.gz => sub-balgrist02_space-other_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-balgrist02/dwi/{sub-balgrist02_rec-average_dwi_seg-manual.json => sub-balgrist02_rec-average_dwi_label-SC_seg.json} (100%) rename derivatives/labels/sub-balgrist02/dwi/{sub-balgrist02_rec-average_dwi_seg-manual.nii.gz => sub-balgrist02_rec-average_dwi_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-balgrist03/anat/{sub-balgrist03_flip-1_mt-on_space-other_MTS_seg-manual.json => sub-balgrist03_flip-1_mt-on_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-balgrist03/anat/{sub-balgrist03_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz => sub-balgrist03_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-balgrist03/anat/{sub-balgrist03_flip-2_mt-off_space-other_MTS_seg-manual.json => sub-balgrist03_flip-2_mt-off_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-balgrist03/anat/{sub-balgrist03_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz => sub-balgrist03_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-balgrist03/anat/{sub-balgrist03_space-other_T1w_seg-manual.json => sub-balgrist03_space-other_T1w_label-SC_seg.json} (100%) rename derivatives/labels/sub-balgrist03/anat/{sub-balgrist03_space-other_T1w_seg-manual.nii.gz => sub-balgrist03_space-other_T1w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-balgrist03/anat/{sub-balgrist03_space-other_T1w_labels-disc-manual.json => sub-balgrist03_space-other_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-balgrist03/anat/{sub-balgrist03_space-other_T1w_labels-disc-manual.nii.gz => sub-balgrist03_space-other_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-balgrist03/anat/{sub-balgrist03_space-other_T2star_seg-manual.json => sub-balgrist03_space-other_T2star_label-SC_seg.json} (100%) rename derivatives/labels/sub-balgrist03/anat/{sub-balgrist03_space-other_T2star_seg-manual.nii.gz => sub-balgrist03_space-other_T2star_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-balgrist03/anat/{sub-balgrist03_space-other_T2w_seg-manual.json => sub-balgrist03_space-other_T2w_label-SC_seg.json} (100%) rename derivatives/labels/sub-balgrist03/anat/{sub-balgrist03_space-other_T2w_seg-manual.nii.gz => sub-balgrist03_space-other_T2w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-balgrist03/anat/{sub-balgrist03_space-other_T2w_labels-disc-manual.json => sub-balgrist03_space-other_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-balgrist03/anat/{sub-balgrist03_space-other_T2w_labels-disc-manual.nii.gz => sub-balgrist03_space-other_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-balgrist03/dwi/{sub-balgrist03_rec-average_dwi_seg-manual.json => sub-balgrist03_rec-average_dwi_label-SC_seg.json} (100%) rename derivatives/labels/sub-balgrist03/dwi/{sub-balgrist03_rec-average_dwi_seg-manual.nii.gz => sub-balgrist03_rec-average_dwi_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-balgrist04/anat/{sub-balgrist04_flip-1_mt-on_space-other_MTS_seg-manual.json => sub-balgrist04_flip-1_mt-on_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-balgrist04/anat/{sub-balgrist04_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz => sub-balgrist04_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-balgrist04/anat/{sub-balgrist04_flip-2_mt-off_space-other_MTS_seg-manual.json => sub-balgrist04_flip-2_mt-off_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-balgrist04/anat/{sub-balgrist04_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz => sub-balgrist04_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-balgrist04/anat/{sub-balgrist04_space-other_T1w_seg-manual.json => sub-balgrist04_space-other_T1w_label-SC_seg.json} (100%) rename derivatives/labels/sub-balgrist04/anat/{sub-balgrist04_space-other_T1w_seg-manual.nii.gz => sub-balgrist04_space-other_T1w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-balgrist04/anat/{sub-balgrist04_space-other_T1w_labels-disc-manual.json => sub-balgrist04_space-other_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-balgrist04/anat/{sub-balgrist04_space-other_T1w_labels-disc-manual.nii.gz => sub-balgrist04_space-other_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-balgrist04/anat/{sub-balgrist04_space-other_T2star_seg-manual.json => sub-balgrist04_space-other_T2star_label-SC_seg.json} (100%) rename derivatives/labels/sub-balgrist04/anat/{sub-balgrist04_space-other_T2star_seg-manual.nii.gz => sub-balgrist04_space-other_T2star_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-balgrist04/anat/{sub-balgrist04_space-other_T2w_seg-manual.json => sub-balgrist04_space-other_T2w_label-SC_seg.json} (100%) rename derivatives/labels/sub-balgrist04/anat/{sub-balgrist04_space-other_T2w_seg-manual.nii.gz => sub-balgrist04_space-other_T2w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-balgrist04/anat/{sub-balgrist04_space-other_T2w_labels-disc-manual.json => sub-balgrist04_space-other_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-balgrist04/anat/{sub-balgrist04_space-other_T2w_labels-disc-manual.nii.gz => sub-balgrist04_space-other_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-balgrist04/dwi/{sub-balgrist04_rec-average_dwi_seg-manual.json => sub-balgrist04_rec-average_dwi_label-SC_seg.json} (100%) rename derivatives/labels/sub-balgrist04/dwi/{sub-balgrist04_rec-average_dwi_seg-manual.nii.gz => sub-balgrist04_rec-average_dwi_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-balgrist05/anat/{sub-balgrist05_flip-1_mt-on_space-other_MTS_seg-manual.json => sub-balgrist05_flip-1_mt-on_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-balgrist05/anat/{sub-balgrist05_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz => sub-balgrist05_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-balgrist05/anat/{sub-balgrist05_flip-2_mt-off_space-other_MTS_seg-manual.json => sub-balgrist05_flip-2_mt-off_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-balgrist05/anat/{sub-balgrist05_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz => sub-balgrist05_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-balgrist05/anat/{sub-balgrist05_space-other_T1w_seg-manual.json => sub-balgrist05_space-other_T1w_label-SC_seg.json} (100%) rename derivatives/labels/sub-balgrist05/anat/{sub-balgrist05_space-other_T1w_seg-manual.nii.gz => sub-balgrist05_space-other_T1w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-balgrist05/anat/{sub-balgrist05_space-other_T1w_labels-disc-manual.json => sub-balgrist05_space-other_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-balgrist05/anat/{sub-balgrist05_space-other_T1w_labels-disc-manual.nii.gz => sub-balgrist05_space-other_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-balgrist05/anat/{sub-balgrist05_space-other_T2star_seg-manual.json => sub-balgrist05_space-other_T2star_label-SC_seg.json} (100%) rename derivatives/labels/sub-balgrist05/anat/{sub-balgrist05_space-other_T2star_seg-manual.nii.gz => sub-balgrist05_space-other_T2star_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-balgrist05/anat/{sub-balgrist05_space-other_T2w_seg-manual.json => sub-balgrist05_space-other_T2w_label-SC_seg.json} (100%) rename derivatives/labels/sub-balgrist05/anat/{sub-balgrist05_space-other_T2w_seg-manual.nii.gz => sub-balgrist05_space-other_T2w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-balgrist05/anat/{sub-balgrist05_space-other_T2w_labels-disc-manual.json => sub-balgrist05_space-other_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-balgrist05/anat/{sub-balgrist05_space-other_T2w_labels-disc-manual.nii.gz => sub-balgrist05_space-other_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-balgrist05/dwi/{sub-balgrist05_rec-average_dwi_seg-manual.json => sub-balgrist05_rec-average_dwi_label-SC_seg.json} (100%) rename derivatives/labels/sub-balgrist05/dwi/{sub-balgrist05_rec-average_dwi_seg-manual.nii.gz => sub-balgrist05_rec-average_dwi_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-balgrist06/anat/{sub-balgrist06_flip-1_mt-on_space-other_MTS_seg-manual.json => sub-balgrist06_flip-1_mt-on_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-balgrist06/anat/{sub-balgrist06_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz => sub-balgrist06_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-balgrist06/anat/{sub-balgrist06_flip-2_mt-off_space-other_MTS_seg-manual.json => sub-balgrist06_flip-2_mt-off_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-balgrist06/anat/{sub-balgrist06_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz => sub-balgrist06_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-balgrist06/anat/{sub-balgrist06_space-other_T1w_seg-manual.json => sub-balgrist06_space-other_T1w_label-SC_seg.json} (100%) rename derivatives/labels/sub-balgrist06/anat/{sub-balgrist06_space-other_T1w_seg-manual.nii.gz => sub-balgrist06_space-other_T1w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-balgrist06/anat/{sub-balgrist06_space-other_T1w_labels-disc-manual.json => sub-balgrist06_space-other_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-balgrist06/anat/{sub-balgrist06_space-other_T1w_labels-disc-manual.nii.gz => sub-balgrist06_space-other_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-balgrist06/anat/{sub-balgrist06_space-other_T2star_seg-manual.json => sub-balgrist06_space-other_T2star_label-SC_seg.json} (100%) rename derivatives/labels/sub-balgrist06/anat/{sub-balgrist06_space-other_T2star_seg-manual.nii.gz => sub-balgrist06_space-other_T2star_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-balgrist06/anat/{sub-balgrist06_space-other_T2w_seg-manual.json => sub-balgrist06_space-other_T2w_label-SC_seg.json} (100%) rename derivatives/labels/sub-balgrist06/anat/{sub-balgrist06_space-other_T2w_seg-manual.nii.gz => sub-balgrist06_space-other_T2w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-balgrist06/anat/{sub-balgrist06_space-other_T2w_labels-disc-manual.json => sub-balgrist06_space-other_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-balgrist06/anat/{sub-balgrist06_space-other_T2w_labels-disc-manual.nii.gz => sub-balgrist06_space-other_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-balgrist06/dwi/{sub-balgrist06_rec-average_dwi_seg-manual.json => sub-balgrist06_rec-average_dwi_label-SC_seg.json} (100%) rename derivatives/labels/sub-balgrist06/dwi/{sub-balgrist06_rec-average_dwi_seg-manual.nii.gz => sub-balgrist06_rec-average_dwi_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-barcelona01/anat/{sub-barcelona01_flip-1_mt-on_space-other_MTS_seg-manual.json => sub-barcelona01_flip-1_mt-on_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-barcelona01/anat/{sub-barcelona01_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz => sub-barcelona01_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-barcelona01/anat/{sub-barcelona01_flip-2_mt-off_space-other_MTS_seg-manual.json => sub-barcelona01_flip-2_mt-off_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-barcelona01/anat/{sub-barcelona01_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz => sub-barcelona01_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-barcelona01/anat/{sub-barcelona01_space-other_T1w_seg-manual.json => sub-barcelona01_space-other_T1w_label-SC_seg.json} (100%) rename derivatives/labels/sub-barcelona01/anat/{sub-barcelona01_space-other_T1w_seg-manual.nii.gz => sub-barcelona01_space-other_T1w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-barcelona01/anat/{sub-barcelona01_space-other_T1w_labels-disc-manual.json => sub-barcelona01_space-other_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-barcelona01/anat/{sub-barcelona01_space-other_T1w_labels-disc-manual.nii.gz => sub-barcelona01_space-other_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-barcelona01/anat/{sub-barcelona01_space-other_T2star_seg-manual.json => sub-barcelona01_space-other_T2star_label-SC_seg.json} (100%) rename derivatives/labels/sub-barcelona01/anat/{sub-barcelona01_space-other_T2star_seg-manual.nii.gz => sub-barcelona01_space-other_T2star_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-barcelona01/anat/{sub-barcelona01_space-other_T2w_seg-manual.json => sub-barcelona01_space-other_T2w_label-SC_seg.json} (100%) rename derivatives/labels/sub-barcelona01/anat/{sub-barcelona01_space-other_T2w_seg-manual.nii.gz => sub-barcelona01_space-other_T2w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-barcelona01/anat/{sub-barcelona01_space-other_T2w_labels-disc-manual.json => sub-barcelona01_space-other_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-barcelona01/anat/{sub-barcelona01_space-other_T2w_labels-disc-manual.nii.gz => sub-barcelona01_space-other_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-barcelona01/dwi/{sub-barcelona01_rec-average_dwi_seg-manual.json => sub-barcelona01_rec-average_dwi_label-SC_seg.json} (100%) rename derivatives/labels/sub-barcelona01/dwi/{sub-barcelona01_rec-average_dwi_seg-manual.nii.gz => sub-barcelona01_rec-average_dwi_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-barcelona02/anat/{sub-barcelona02_flip-1_mt-on_space-other_MTS_seg-manual.json => sub-barcelona02_flip-1_mt-on_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-barcelona02/anat/{sub-barcelona02_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz => sub-barcelona02_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-barcelona02/anat/{sub-barcelona02_flip-2_mt-off_space-other_MTS_seg-manual.json => sub-barcelona02_flip-2_mt-off_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-barcelona02/anat/{sub-barcelona02_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz => sub-barcelona02_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-barcelona02/anat/{sub-barcelona02_space-other_T1w_seg-manual.json => sub-barcelona02_space-other_T1w_label-SC_seg.json} (100%) rename derivatives/labels/sub-barcelona02/anat/{sub-barcelona02_space-other_T1w_seg-manual.nii.gz => sub-barcelona02_space-other_T1w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-barcelona02/anat/{sub-barcelona02_space-other_T1w_labels-disc-manual.json => sub-barcelona02_space-other_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-barcelona02/anat/{sub-barcelona02_space-other_T1w_labels-disc-manual.nii.gz => sub-barcelona02_space-other_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-barcelona02/anat/{sub-barcelona02_space-other_T2star_seg-manual.json => sub-barcelona02_space-other_T2star_label-SC_seg.json} (100%) rename derivatives/labels/sub-barcelona02/anat/{sub-barcelona02_space-other_T2star_seg-manual.nii.gz => sub-barcelona02_space-other_T2star_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-barcelona02/anat/{sub-barcelona02_space-other_T2w_seg-manual.json => sub-barcelona02_space-other_T2w_label-SC_seg.json} (100%) rename derivatives/labels/sub-barcelona02/anat/{sub-barcelona02_space-other_T2w_seg-manual.nii.gz => sub-barcelona02_space-other_T2w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-barcelona02/anat/{sub-barcelona02_space-other_T2w_labels-disc-manual.json => sub-barcelona02_space-other_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-barcelona02/anat/{sub-barcelona02_space-other_T2w_labels-disc-manual.nii.gz => sub-barcelona02_space-other_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-barcelona02/dwi/{sub-barcelona02_rec-average_dwi_seg-manual.json => sub-barcelona02_rec-average_dwi_label-SC_seg.json} (100%) rename derivatives/labels/sub-barcelona02/dwi/{sub-barcelona02_rec-average_dwi_seg-manual.nii.gz => sub-barcelona02_rec-average_dwi_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-barcelona03/anat/{sub-barcelona03_flip-1_mt-on_space-other_MTS_seg-manual.json => sub-barcelona03_flip-1_mt-on_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-barcelona03/anat/{sub-barcelona03_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz => sub-barcelona03_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-barcelona03/anat/{sub-barcelona03_flip-2_mt-off_space-other_MTS_seg-manual.json => sub-barcelona03_flip-2_mt-off_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-barcelona03/anat/{sub-barcelona03_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz => sub-barcelona03_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-barcelona03/anat/{sub-barcelona03_space-other_T1w_seg-manual.json => sub-barcelona03_space-other_T1w_label-SC_seg.json} (100%) rename derivatives/labels/sub-barcelona03/anat/{sub-barcelona03_space-other_T1w_seg-manual.nii.gz => sub-barcelona03_space-other_T1w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-barcelona03/anat/{sub-barcelona03_space-other_T1w_labels-disc-manual.json => sub-barcelona03_space-other_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-barcelona03/anat/{sub-barcelona03_space-other_T1w_labels-disc-manual.nii.gz => sub-barcelona03_space-other_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-barcelona03/anat/{sub-barcelona03_space-other_T2star_seg-manual.json => sub-barcelona03_space-other_T2star_label-SC_seg.json} (100%) rename derivatives/labels/sub-barcelona03/anat/{sub-barcelona03_space-other_T2star_seg-manual.nii.gz => sub-barcelona03_space-other_T2star_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-barcelona03/anat/{sub-barcelona03_space-other_T2w_seg-manual.json => sub-barcelona03_space-other_T2w_label-SC_seg.json} (100%) rename derivatives/labels/sub-barcelona03/anat/{sub-barcelona03_space-other_T2w_seg-manual.nii.gz => sub-barcelona03_space-other_T2w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-barcelona03/anat/{sub-barcelona03_space-other_T2w_labels-disc-manual.json => sub-barcelona03_space-other_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-barcelona03/anat/{sub-barcelona03_space-other_T2w_labels-disc-manual.nii.gz => sub-barcelona03_space-other_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-barcelona03/dwi/{sub-barcelona03_rec-average_dwi_seg-manual.json => sub-barcelona03_rec-average_dwi_label-SC_seg.json} (100%) rename derivatives/labels/sub-barcelona03/dwi/{sub-barcelona03_rec-average_dwi_seg-manual.nii.gz => sub-barcelona03_rec-average_dwi_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-barcelona04/anat/{sub-barcelona04_flip-1_mt-on_space-other_MTS_seg-manual.json => sub-barcelona04_flip-1_mt-on_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-barcelona04/anat/{sub-barcelona04_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz => sub-barcelona04_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-barcelona04/anat/{sub-barcelona04_flip-2_mt-off_space-other_MTS_seg-manual.json => sub-barcelona04_flip-2_mt-off_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-barcelona04/anat/{sub-barcelona04_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz => sub-barcelona04_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-barcelona04/anat/{sub-barcelona04_space-other_T1w_seg-manual.json => sub-barcelona04_space-other_T1w_label-SC_seg.json} (100%) rename derivatives/labels/sub-barcelona04/anat/{sub-barcelona04_space-other_T1w_seg-manual.nii.gz => sub-barcelona04_space-other_T1w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-barcelona04/anat/{sub-barcelona04_space-other_T1w_labels-disc-manual.json => sub-barcelona04_space-other_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-barcelona04/anat/{sub-barcelona04_space-other_T1w_labels-disc-manual.nii.gz => sub-barcelona04_space-other_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-barcelona04/anat/{sub-barcelona04_space-other_T2star_seg-manual.json => sub-barcelona04_space-other_T2star_label-SC_seg.json} (100%) rename derivatives/labels/sub-barcelona04/anat/{sub-barcelona04_space-other_T2star_seg-manual.nii.gz => sub-barcelona04_space-other_T2star_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-barcelona04/anat/{sub-barcelona04_space-other_T2w_seg-manual.json => sub-barcelona04_space-other_T2w_label-SC_seg.json} (100%) rename derivatives/labels/sub-barcelona04/anat/{sub-barcelona04_space-other_T2w_seg-manual.nii.gz => sub-barcelona04_space-other_T2w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-barcelona04/anat/{sub-barcelona04_space-other_T2w_labels-disc-manual.json => sub-barcelona04_space-other_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-barcelona04/anat/{sub-barcelona04_space-other_T2w_labels-disc-manual.nii.gz => sub-barcelona04_space-other_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-barcelona04/dwi/{sub-barcelona04_rec-average_dwi_seg-manual.json => sub-barcelona04_rec-average_dwi_label-SC_seg.json} (100%) rename derivatives/labels/sub-barcelona04/dwi/{sub-barcelona04_rec-average_dwi_seg-manual.nii.gz => sub-barcelona04_rec-average_dwi_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-barcelona05/anat/{sub-barcelona05_flip-1_mt-on_space-other_MTS_seg-manual.json => sub-barcelona05_flip-1_mt-on_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-barcelona05/anat/{sub-barcelona05_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz => sub-barcelona05_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-barcelona05/anat/{sub-barcelona05_flip-2_mt-off_space-other_MTS_seg-manual.json => sub-barcelona05_flip-2_mt-off_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-barcelona05/anat/{sub-barcelona05_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz => sub-barcelona05_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-barcelona05/anat/{sub-barcelona05_space-other_T1w_seg-manual.json => sub-barcelona05_space-other_T1w_label-SC_seg.json} (100%) rename derivatives/labels/sub-barcelona05/anat/{sub-barcelona05_space-other_T1w_seg-manual.nii.gz => sub-barcelona05_space-other_T1w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-barcelona05/anat/{sub-barcelona05_space-other_T1w_labels-disc-manual.json => sub-barcelona05_space-other_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-barcelona05/anat/{sub-barcelona05_space-other_T1w_labels-disc-manual.nii.gz => sub-barcelona05_space-other_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-barcelona05/anat/{sub-barcelona05_space-other_T2star_seg-manual.json => sub-barcelona05_space-other_T2star_label-SC_seg.json} (100%) rename derivatives/labels/sub-barcelona05/anat/{sub-barcelona05_space-other_T2star_seg-manual.nii.gz => sub-barcelona05_space-other_T2star_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-barcelona05/anat/{sub-barcelona05_space-other_T2w_csfseg-manual.json => sub-barcelona05_space-other_T2w_csflabel-SC_seg.json} (100%) rename derivatives/labels/sub-barcelona05/anat/{sub-barcelona05_space-other_T2w_csfseg-manual.nii.gz => sub-barcelona05_space-other_T2w_csflabel-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-barcelona05/anat/{sub-barcelona05_space-other_T2w_seg-manual.json => sub-barcelona05_space-other_T2w_label-SC_seg.json} (100%) rename derivatives/labels/sub-barcelona05/anat/{sub-barcelona05_space-other_T2w_seg-manual.nii.gz => sub-barcelona05_space-other_T2w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-barcelona05/anat/{sub-barcelona05_space-other_T2w_labels-disc-manual.json => sub-barcelona05_space-other_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-barcelona05/anat/{sub-barcelona05_space-other_T2w_labels-disc-manual.nii.gz => sub-barcelona05_space-other_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-barcelona05/dwi/{sub-barcelona05_rec-average_dwi_seg-manual.json => sub-barcelona05_rec-average_dwi_label-SC_seg.json} (100%) rename derivatives/labels/sub-barcelona05/dwi/{sub-barcelona05_rec-average_dwi_seg-manual.nii.gz => sub-barcelona05_rec-average_dwi_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-barcelona06/anat/{sub-barcelona06_flip-1_mt-on_space-other_MTS_seg-manual.json => sub-barcelona06_flip-1_mt-on_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-barcelona06/anat/{sub-barcelona06_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz => sub-barcelona06_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-barcelona06/anat/{sub-barcelona06_flip-2_mt-off_space-other_MTS_seg-manual.json => sub-barcelona06_flip-2_mt-off_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-barcelona06/anat/{sub-barcelona06_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz => sub-barcelona06_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-barcelona06/anat/{sub-barcelona06_space-other_T1w_seg-manual.json => sub-barcelona06_space-other_T1w_label-SC_seg.json} (100%) rename derivatives/labels/sub-barcelona06/anat/{sub-barcelona06_space-other_T1w_seg-manual.nii.gz => sub-barcelona06_space-other_T1w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-barcelona06/anat/{sub-barcelona06_space-other_T1w_labels-disc-manual.json => sub-barcelona06_space-other_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-barcelona06/anat/{sub-barcelona06_space-other_T1w_labels-disc-manual.nii.gz => sub-barcelona06_space-other_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-barcelona06/anat/{sub-barcelona06_space-other_T2star_seg-manual.json => sub-barcelona06_space-other_T2star_label-SC_seg.json} (100%) rename derivatives/labels/sub-barcelona06/anat/{sub-barcelona06_space-other_T2star_seg-manual.nii.gz => sub-barcelona06_space-other_T2star_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-barcelona06/anat/{sub-barcelona06_space-other_T2w_seg-manual.json => sub-barcelona06_space-other_T2w_label-SC_seg.json} (100%) rename derivatives/labels/sub-barcelona06/anat/{sub-barcelona06_space-other_T2w_seg-manual.nii.gz => sub-barcelona06_space-other_T2w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-barcelona06/anat/{sub-barcelona06_space-other_T2w_labels-disc-manual.json => sub-barcelona06_space-other_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-barcelona06/anat/{sub-barcelona06_space-other_T2w_labels-disc-manual.nii.gz => sub-barcelona06_space-other_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-barcelona06/dwi/{sub-barcelona06_rec-average_dwi_seg-manual.json => sub-barcelona06_rec-average_dwi_label-SC_seg.json} (100%) rename derivatives/labels/sub-barcelona06/dwi/{sub-barcelona06_rec-average_dwi_seg-manual.nii.gz => sub-barcelona06_rec-average_dwi_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-beijingGE01/anat/{sub-beijingGE01_space-other_T1w_seg-manual.json => sub-beijingGE01_space-other_T1w_label-SC_seg.json} (100%) rename derivatives/labels/sub-beijingGE01/anat/{sub-beijingGE01_space-other_T1w_seg-manual.nii.gz => sub-beijingGE01_space-other_T1w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-beijingGE01/anat/{sub-beijingGE01_space-other_T1w_labels-disc-manual.json => sub-beijingGE01_space-other_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-beijingGE01/anat/{sub-beijingGE01_space-other_T1w_labels-disc-manual.nii.gz => sub-beijingGE01_space-other_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-beijingGE01/anat/{sub-beijingGE01_space-other_T2star_seg-manual.json => sub-beijingGE01_space-other_T2star_label-SC_seg.json} (100%) rename derivatives/labels/sub-beijingGE01/anat/{sub-beijingGE01_space-other_T2star_seg-manual.nii.gz => sub-beijingGE01_space-other_T2star_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-beijingGE01/anat/{sub-beijingGE01_space-other_T2w_seg-manual.json => sub-beijingGE01_space-other_T2w_label-SC_seg.json} (100%) rename derivatives/labels/sub-beijingGE01/anat/{sub-beijingGE01_space-other_T2w_seg-manual.nii.gz => sub-beijingGE01_space-other_T2w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-beijingGE01/anat/{sub-beijingGE01_space-other_T2w_labels-disc-manual.json => sub-beijingGE01_space-other_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-beijingGE01/anat/{sub-beijingGE01_space-other_T2w_labels-disc-manual.nii.gz => sub-beijingGE01_space-other_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-beijingGE01/dwi/{sub-beijingGE01_rec-average_dwi_seg-manual.json => sub-beijingGE01_rec-average_dwi_label-SC_seg.json} (100%) rename derivatives/labels/sub-beijingGE01/dwi/{sub-beijingGE01_rec-average_dwi_seg-manual.nii.gz => sub-beijingGE01_rec-average_dwi_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-beijingGE02/anat/{sub-beijingGE02_space-other_T1w_seg-manual.json => sub-beijingGE02_space-other_T1w_label-SC_seg.json} (100%) rename derivatives/labels/sub-beijingGE02/anat/{sub-beijingGE02_space-other_T1w_seg-manual.nii.gz => sub-beijingGE02_space-other_T1w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-beijingGE02/anat/{sub-beijingGE02_space-other_T1w_labels-disc-manual.json => sub-beijingGE02_space-other_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-beijingGE02/anat/{sub-beijingGE02_space-other_T1w_labels-disc-manual.nii.gz => sub-beijingGE02_space-other_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-beijingGE02/anat/{sub-beijingGE02_space-other_T2star_seg-manual.json => sub-beijingGE02_space-other_T2star_label-SC_seg.json} (100%) rename derivatives/labels/sub-beijingGE02/anat/{sub-beijingGE02_space-other_T2star_seg-manual.nii.gz => sub-beijingGE02_space-other_T2star_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-beijingGE02/anat/{sub-beijingGE02_space-other_T2w_seg-manual.json => sub-beijingGE02_space-other_T2w_label-SC_seg.json} (100%) rename derivatives/labels/sub-beijingGE02/anat/{sub-beijingGE02_space-other_T2w_seg-manual.nii.gz => sub-beijingGE02_space-other_T2w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-beijingGE02/anat/{sub-beijingGE02_space-other_T2w_labels-disc-manual.json => sub-beijingGE02_space-other_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-beijingGE02/anat/{sub-beijingGE02_space-other_T2w_labels-disc-manual.nii.gz => sub-beijingGE02_space-other_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-beijingGE02/dwi/{sub-beijingGE02_rec-average_dwi_seg-manual.json => sub-beijingGE02_rec-average_dwi_label-SC_seg.json} (100%) rename derivatives/labels/sub-beijingGE02/dwi/{sub-beijingGE02_rec-average_dwi_seg-manual.nii.gz => sub-beijingGE02_rec-average_dwi_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-beijingGE03/anat/{sub-beijingGE03_space-other_T1w_seg-manual.json => sub-beijingGE03_space-other_T1w_label-SC_seg.json} (100%) rename derivatives/labels/sub-beijingGE03/anat/{sub-beijingGE03_space-other_T1w_seg-manual.nii.gz => sub-beijingGE03_space-other_T1w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-beijingGE03/anat/{sub-beijingGE03_space-other_T1w_labels-disc-manual.json => sub-beijingGE03_space-other_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-beijingGE03/anat/{sub-beijingGE03_space-other_T1w_labels-disc-manual.nii.gz => sub-beijingGE03_space-other_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-beijingGE03/anat/{sub-beijingGE03_space-other_T2star_seg-manual.json => sub-beijingGE03_space-other_T2star_label-SC_seg.json} (100%) rename derivatives/labels/sub-beijingGE03/anat/{sub-beijingGE03_space-other_T2star_seg-manual.nii.gz => sub-beijingGE03_space-other_T2star_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-beijingGE03/anat/{sub-beijingGE03_space-other_T2w_seg-manual.json => sub-beijingGE03_space-other_T2w_label-SC_seg.json} (100%) rename derivatives/labels/sub-beijingGE03/anat/{sub-beijingGE03_space-other_T2w_seg-manual.nii.gz => sub-beijingGE03_space-other_T2w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-beijingGE03/anat/{sub-beijingGE03_space-other_T2w_labels-disc-manual.json => sub-beijingGE03_space-other_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-beijingGE03/anat/{sub-beijingGE03_space-other_T2w_labels-disc-manual.nii.gz => sub-beijingGE03_space-other_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-beijingGE03/dwi/{sub-beijingGE03_rec-average_dwi_seg-manual.json => sub-beijingGE03_rec-average_dwi_label-SC_seg.json} (100%) rename derivatives/labels/sub-beijingGE03/dwi/{sub-beijingGE03_rec-average_dwi_seg-manual.nii.gz => sub-beijingGE03_rec-average_dwi_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-beijingGE04/anat/{sub-beijingGE04_space-other_T1w_seg-manual.json => sub-beijingGE04_space-other_T1w_label-SC_seg.json} (100%) rename derivatives/labels/sub-beijingGE04/anat/{sub-beijingGE04_space-other_T1w_seg-manual.nii.gz => sub-beijingGE04_space-other_T1w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-beijingGE04/anat/{sub-beijingGE04_space-other_T1w_labels-disc-manual.json => sub-beijingGE04_space-other_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-beijingGE04/anat/{sub-beijingGE04_space-other_T1w_labels-disc-manual.nii.gz => sub-beijingGE04_space-other_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-beijingGE04/anat/{sub-beijingGE04_space-other_T2w_seg-manual.json => sub-beijingGE04_space-other_T2w_label-SC_seg.json} (100%) rename derivatives/labels/sub-beijingGE04/anat/{sub-beijingGE04_space-other_T2w_seg-manual.nii.gz => sub-beijingGE04_space-other_T2w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-beijingGE04/anat/{sub-beijingGE04_space-other_T2w_labels-disc-manual.json => sub-beijingGE04_space-other_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-beijingGE04/anat/{sub-beijingGE04_space-other_T2w_labels-disc-manual.nii.gz => sub-beijingGE04_space-other_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-beijingGE04/dwi/{sub-beijingGE04_rec-average_dwi_seg-manual.json => sub-beijingGE04_rec-average_dwi_label-SC_seg.json} (100%) rename derivatives/labels/sub-beijingGE04/dwi/{sub-beijingGE04_rec-average_dwi_seg-manual.nii.gz => sub-beijingGE04_rec-average_dwi_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-beijingPrisma01/anat/{sub-beijingPrisma01_flip-1_mt-on_space-other_MTS_seg-manual.json => sub-beijingPrisma01_flip-1_mt-on_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-beijingPrisma01/anat/{sub-beijingPrisma01_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz => sub-beijingPrisma01_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-beijingPrisma01/anat/{sub-beijingPrisma01_flip-2_mt-off_space-other_MTS_seg-manual.json => sub-beijingPrisma01_flip-2_mt-off_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-beijingPrisma01/anat/{sub-beijingPrisma01_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz => sub-beijingPrisma01_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-beijingPrisma01/anat/{sub-beijingPrisma01_space-other_T1w_seg-manual.json => sub-beijingPrisma01_space-other_T1w_label-SC_seg.json} (100%) rename derivatives/labels/sub-beijingPrisma01/anat/{sub-beijingPrisma01_space-other_T1w_seg-manual.nii.gz => sub-beijingPrisma01_space-other_T1w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-beijingPrisma01/anat/{sub-beijingPrisma01_space-other_T1w_labels-disc-manual.json => sub-beijingPrisma01_space-other_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-beijingPrisma01/anat/{sub-beijingPrisma01_space-other_T1w_labels-disc-manual.nii.gz => sub-beijingPrisma01_space-other_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-beijingPrisma01/anat/{sub-beijingPrisma01_space-other_T2star_seg-manual.json => sub-beijingPrisma01_space-other_T2star_label-SC_seg.json} (100%) rename derivatives/labels/sub-beijingPrisma01/anat/{sub-beijingPrisma01_space-other_T2star_seg-manual.nii.gz => sub-beijingPrisma01_space-other_T2star_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-beijingPrisma01/anat/{sub-beijingPrisma01_space-other_T2w_seg-manual.json => sub-beijingPrisma01_space-other_T2w_label-SC_seg.json} (100%) rename derivatives/labels/sub-beijingPrisma01/anat/{sub-beijingPrisma01_space-other_T2w_seg-manual.nii.gz => sub-beijingPrisma01_space-other_T2w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-beijingPrisma01/anat/{sub-beijingPrisma01_space-other_T2w_labels-disc-manual.json => sub-beijingPrisma01_space-other_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-beijingPrisma01/anat/{sub-beijingPrisma01_space-other_T2w_labels-disc-manual.nii.gz => sub-beijingPrisma01_space-other_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-beijingPrisma01/dwi/{sub-beijingPrisma01_rec-average_dwi_seg-manual.json => sub-beijingPrisma01_rec-average_dwi_label-SC_seg.json} (100%) rename derivatives/labels/sub-beijingPrisma01/dwi/{sub-beijingPrisma01_rec-average_dwi_seg-manual.nii.gz => sub-beijingPrisma01_rec-average_dwi_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-beijingPrisma02/anat/{sub-beijingPrisma02_flip-1_mt-on_space-other_MTS_seg-manual.json => sub-beijingPrisma02_flip-1_mt-on_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-beijingPrisma02/anat/{sub-beijingPrisma02_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz => sub-beijingPrisma02_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-beijingPrisma02/anat/{sub-beijingPrisma02_flip-2_mt-off_space-other_MTS_seg-manual.json => sub-beijingPrisma02_flip-2_mt-off_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-beijingPrisma02/anat/{sub-beijingPrisma02_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz => sub-beijingPrisma02_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-beijingPrisma02/anat/{sub-beijingPrisma02_space-other_T1w_seg-manual.json => sub-beijingPrisma02_space-other_T1w_label-SC_seg.json} (100%) rename derivatives/labels/sub-beijingPrisma02/anat/{sub-beijingPrisma02_space-other_T1w_seg-manual.nii.gz => sub-beijingPrisma02_space-other_T1w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-beijingPrisma02/anat/{sub-beijingPrisma02_space-other_T1w_labels-disc-manual.json => sub-beijingPrisma02_space-other_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-beijingPrisma02/anat/{sub-beijingPrisma02_space-other_T1w_labels-disc-manual.nii.gz => sub-beijingPrisma02_space-other_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-beijingPrisma02/anat/{sub-beijingPrisma02_space-other_T2star_seg-manual.json => sub-beijingPrisma02_space-other_T2star_label-SC_seg.json} (100%) rename derivatives/labels/sub-beijingPrisma02/anat/{sub-beijingPrisma02_space-other_T2star_seg-manual.nii.gz => sub-beijingPrisma02_space-other_T2star_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-beijingPrisma02/anat/{sub-beijingPrisma02_space-other_T2w_seg-manual.json => sub-beijingPrisma02_space-other_T2w_label-SC_seg.json} (100%) rename derivatives/labels/sub-beijingPrisma02/anat/{sub-beijingPrisma02_space-other_T2w_seg-manual.nii.gz => sub-beijingPrisma02_space-other_T2w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-beijingPrisma02/anat/{sub-beijingPrisma02_space-other_T2w_labels-disc-manual.json => sub-beijingPrisma02_space-other_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-beijingPrisma02/anat/{sub-beijingPrisma02_space-other_T2w_labels-disc-manual.nii.gz => sub-beijingPrisma02_space-other_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-beijingPrisma02/dwi/{sub-beijingPrisma02_rec-average_dwi_seg-manual.json => sub-beijingPrisma02_rec-average_dwi_label-SC_seg.json} (100%) rename derivatives/labels/sub-beijingPrisma02/dwi/{sub-beijingPrisma02_rec-average_dwi_seg-manual.nii.gz => sub-beijingPrisma02_rec-average_dwi_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-beijingPrisma03/anat/{sub-beijingPrisma03_flip-1_mt-on_space-other_MTS_seg-manual.json => sub-beijingPrisma03_flip-1_mt-on_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-beijingPrisma03/anat/{sub-beijingPrisma03_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz => sub-beijingPrisma03_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-beijingPrisma03/anat/{sub-beijingPrisma03_flip-2_mt-off_space-other_MTS_seg-manual.json => sub-beijingPrisma03_flip-2_mt-off_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-beijingPrisma03/anat/{sub-beijingPrisma03_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz => sub-beijingPrisma03_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-beijingPrisma03/anat/{sub-beijingPrisma03_space-other_T1w_seg-manual.json => sub-beijingPrisma03_space-other_T1w_label-SC_seg.json} (100%) rename derivatives/labels/sub-beijingPrisma03/anat/{sub-beijingPrisma03_space-other_T1w_seg-manual.nii.gz => sub-beijingPrisma03_space-other_T1w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-beijingPrisma03/anat/{sub-beijingPrisma03_space-other_T1w_labels-disc-manual.json => sub-beijingPrisma03_space-other_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-beijingPrisma03/anat/{sub-beijingPrisma03_space-other_T1w_labels-disc-manual.nii.gz => sub-beijingPrisma03_space-other_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-beijingPrisma03/anat/{sub-beijingPrisma03_space-other_T2star_seg-manual.json => sub-beijingPrisma03_space-other_T2star_label-SC_seg.json} (100%) rename derivatives/labels/sub-beijingPrisma03/anat/{sub-beijingPrisma03_space-other_T2star_seg-manual.nii.gz => sub-beijingPrisma03_space-other_T2star_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-beijingPrisma03/anat/{sub-beijingPrisma03_space-other_T2w_seg-manual.json => sub-beijingPrisma03_space-other_T2w_label-SC_seg.json} (100%) rename derivatives/labels/sub-beijingPrisma03/anat/{sub-beijingPrisma03_space-other_T2w_seg-manual.nii.gz => sub-beijingPrisma03_space-other_T2w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-beijingPrisma03/anat/{sub-beijingPrisma03_space-other_T2w_labels-disc-manual.json => sub-beijingPrisma03_space-other_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-beijingPrisma03/anat/{sub-beijingPrisma03_space-other_T2w_labels-disc-manual.nii.gz => sub-beijingPrisma03_space-other_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-beijingPrisma03/dwi/{sub-beijingPrisma03_rec-average_dwi_seg-manual.json => sub-beijingPrisma03_rec-average_dwi_label-SC_seg.json} (100%) rename derivatives/labels/sub-beijingPrisma03/dwi/{sub-beijingPrisma03_rec-average_dwi_seg-manual.nii.gz => sub-beijingPrisma03_rec-average_dwi_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-beijingPrisma04/anat/{sub-beijingPrisma04_flip-1_mt-on_space-other_MTS_seg-manual.json => sub-beijingPrisma04_flip-1_mt-on_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-beijingPrisma04/anat/{sub-beijingPrisma04_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz => sub-beijingPrisma04_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-beijingPrisma04/anat/{sub-beijingPrisma04_flip-2_mt-off_space-other_MTS_seg-manual.json => sub-beijingPrisma04_flip-2_mt-off_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-beijingPrisma04/anat/{sub-beijingPrisma04_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz => sub-beijingPrisma04_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-beijingPrisma04/anat/{sub-beijingPrisma04_space-other_T1w_seg-manual.json => sub-beijingPrisma04_space-other_T1w_label-SC_seg.json} (100%) rename derivatives/labels/sub-beijingPrisma04/anat/{sub-beijingPrisma04_space-other_T1w_seg-manual.nii.gz => sub-beijingPrisma04_space-other_T1w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-beijingPrisma04/anat/{sub-beijingPrisma04_space-other_T1w_labels-disc-manual.json => sub-beijingPrisma04_space-other_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-beijingPrisma04/anat/{sub-beijingPrisma04_space-other_T1w_labels-disc-manual.nii.gz => sub-beijingPrisma04_space-other_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-beijingPrisma04/anat/{sub-beijingPrisma04_space-other_T2star_seg-manual.json => sub-beijingPrisma04_space-other_T2star_label-SC_seg.json} (100%) rename derivatives/labels/sub-beijingPrisma04/anat/{sub-beijingPrisma04_space-other_T2star_seg-manual.nii.gz => sub-beijingPrisma04_space-other_T2star_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-beijingPrisma04/anat/{sub-beijingPrisma04_space-other_T2w_seg-manual.json => sub-beijingPrisma04_space-other_T2w_label-SC_seg.json} (100%) rename derivatives/labels/sub-beijingPrisma04/anat/{sub-beijingPrisma04_space-other_T2w_seg-manual.nii.gz => sub-beijingPrisma04_space-other_T2w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-beijingPrisma04/anat/{sub-beijingPrisma04_space-other_T2w_labels-disc-manual.json => sub-beijingPrisma04_space-other_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-beijingPrisma04/anat/{sub-beijingPrisma04_space-other_T2w_labels-disc-manual.nii.gz => sub-beijingPrisma04_space-other_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-beijingPrisma04/dwi/{sub-beijingPrisma04_rec-average_dwi_seg-manual.json => sub-beijingPrisma04_rec-average_dwi_label-SC_seg.json} (100%) rename derivatives/labels/sub-beijingPrisma04/dwi/{sub-beijingPrisma04_rec-average_dwi_seg-manual.nii.gz => sub-beijingPrisma04_rec-average_dwi_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-beijingPrisma05/anat/{sub-beijingPrisma05_flip-1_mt-on_space-other_MTS_seg-manual.json => sub-beijingPrisma05_flip-1_mt-on_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-beijingPrisma05/anat/{sub-beijingPrisma05_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz => sub-beijingPrisma05_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-beijingPrisma05/anat/{sub-beijingPrisma05_flip-2_mt-off_space-other_MTS_seg-manual.json => sub-beijingPrisma05_flip-2_mt-off_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-beijingPrisma05/anat/{sub-beijingPrisma05_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz => sub-beijingPrisma05_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-beijingPrisma05/anat/{sub-beijingPrisma05_space-other_T1w_seg-manual.json => sub-beijingPrisma05_space-other_T1w_label-SC_seg.json} (100%) rename derivatives/labels/sub-beijingPrisma05/anat/{sub-beijingPrisma05_space-other_T1w_seg-manual.nii.gz => sub-beijingPrisma05_space-other_T1w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-beijingPrisma05/anat/{sub-beijingPrisma05_space-other_T1w_labels-disc-manual.json => sub-beijingPrisma05_space-other_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-beijingPrisma05/anat/{sub-beijingPrisma05_space-other_T1w_labels-disc-manual.nii.gz => sub-beijingPrisma05_space-other_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-beijingPrisma05/anat/{sub-beijingPrisma05_space-other_T2star_seg-manual.json => sub-beijingPrisma05_space-other_T2star_label-SC_seg.json} (100%) rename derivatives/labels/sub-beijingPrisma05/anat/{sub-beijingPrisma05_space-other_T2star_seg-manual.nii.gz => sub-beijingPrisma05_space-other_T2star_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-beijingPrisma05/anat/{sub-beijingPrisma05_space-other_T2w_seg-manual.json => sub-beijingPrisma05_space-other_T2w_label-SC_seg.json} (100%) rename derivatives/labels/sub-beijingPrisma05/anat/{sub-beijingPrisma05_space-other_T2w_seg-manual.nii.gz => sub-beijingPrisma05_space-other_T2w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-beijingPrisma05/anat/{sub-beijingPrisma05_space-other_T2w_labels-disc-manual.json => sub-beijingPrisma05_space-other_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-beijingPrisma05/anat/{sub-beijingPrisma05_space-other_T2w_labels-disc-manual.nii.gz => sub-beijingPrisma05_space-other_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-beijingPrisma05/dwi/{sub-beijingPrisma05_rec-average_dwi_seg-manual.json => sub-beijingPrisma05_rec-average_dwi_label-SC_seg.json} (100%) rename derivatives/labels/sub-beijingPrisma05/dwi/{sub-beijingPrisma05_rec-average_dwi_seg-manual.nii.gz => sub-beijingPrisma05_rec-average_dwi_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-beijingVerio01/anat/{sub-beijingVerio01_space-other_T1w_seg-manual.json => sub-beijingVerio01_space-other_T1w_label-SC_seg.json} (100%) rename derivatives/labels/sub-beijingVerio01/anat/{sub-beijingVerio01_space-other_T1w_seg-manual.nii.gz => sub-beijingVerio01_space-other_T1w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-beijingVerio01/anat/{sub-beijingVerio01_space-other_T1w_labels-disc-manual.json => sub-beijingVerio01_space-other_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-beijingVerio01/anat/{sub-beijingVerio01_space-other_T1w_labels-disc-manual.nii.gz => sub-beijingVerio01_space-other_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-beijingVerio01/anat/{sub-beijingVerio01_space-other_T2star_seg-manual.json => sub-beijingVerio01_space-other_T2star_label-SC_seg.json} (100%) rename derivatives/labels/sub-beijingVerio01/anat/{sub-beijingVerio01_space-other_T2star_seg-manual.nii.gz => sub-beijingVerio01_space-other_T2star_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-beijingVerio01/anat/{sub-beijingVerio01_space-other_T2w_seg-manual.json => sub-beijingVerio01_space-other_T2w_label-SC_seg.json} (100%) rename derivatives/labels/sub-beijingVerio01/anat/{sub-beijingVerio01_space-other_T2w_seg-manual.nii.gz => sub-beijingVerio01_space-other_T2w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-beijingVerio01/anat/{sub-beijingVerio01_space-other_T2w_labels-disc-manual.json => sub-beijingVerio01_space-other_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-beijingVerio01/anat/{sub-beijingVerio01_space-other_T2w_labels-disc-manual.nii.gz => sub-beijingVerio01_space-other_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-beijingVerio02/anat/{sub-beijingVerio02_space-other_T1w_seg-manual.json => sub-beijingVerio02_space-other_T1w_label-SC_seg.json} (100%) rename derivatives/labels/sub-beijingVerio02/anat/{sub-beijingVerio02_space-other_T1w_seg-manual.nii.gz => sub-beijingVerio02_space-other_T1w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-beijingVerio02/anat/{sub-beijingVerio02_space-other_T1w_labels-disc-manual.json => sub-beijingVerio02_space-other_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-beijingVerio02/anat/{sub-beijingVerio02_space-other_T1w_labels-disc-manual.nii.gz => sub-beijingVerio02_space-other_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-beijingVerio02/anat/{sub-beijingVerio02_space-other_T2star_seg-manual.json => sub-beijingVerio02_space-other_T2star_label-SC_seg.json} (100%) rename derivatives/labels/sub-beijingVerio02/anat/{sub-beijingVerio02_space-other_T2star_seg-manual.nii.gz => sub-beijingVerio02_space-other_T2star_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-beijingVerio02/anat/{sub-beijingVerio02_space-other_T2w_seg-manual.json => sub-beijingVerio02_space-other_T2w_label-SC_seg.json} (100%) rename derivatives/labels/sub-beijingVerio02/anat/{sub-beijingVerio02_space-other_T2w_seg-manual.nii.gz => sub-beijingVerio02_space-other_T2w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-beijingVerio02/anat/{sub-beijingVerio02_space-other_T2w_labels-disc-manual.json => sub-beijingVerio02_space-other_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-beijingVerio02/anat/{sub-beijingVerio02_space-other_T2w_labels-disc-manual.nii.gz => sub-beijingVerio02_space-other_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-beijingVerio02/dwi/{sub-beijingVerio02_rec-average_dwi_seg-manual.json => sub-beijingVerio02_rec-average_dwi_label-SC_seg.json} (100%) rename derivatives/labels/sub-beijingVerio02/dwi/{sub-beijingVerio02_rec-average_dwi_seg-manual.nii.gz => sub-beijingVerio02_rec-average_dwi_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-beijingVerio03/anat/{sub-beijingVerio03_space-other_T1w_seg-manual.json => sub-beijingVerio03_space-other_T1w_label-SC_seg.json} (100%) rename derivatives/labels/sub-beijingVerio03/anat/{sub-beijingVerio03_space-other_T1w_seg-manual.nii.gz => sub-beijingVerio03_space-other_T1w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-beijingVerio03/anat/{sub-beijingVerio03_space-other_T1w_labels-disc-manual.json => sub-beijingVerio03_space-other_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-beijingVerio03/anat/{sub-beijingVerio03_space-other_T1w_labels-disc-manual.nii.gz => sub-beijingVerio03_space-other_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-beijingVerio03/anat/{sub-beijingVerio03_space-other_T2star_seg-manual.json => sub-beijingVerio03_space-other_T2star_label-SC_seg.json} (100%) rename derivatives/labels/sub-beijingVerio03/anat/{sub-beijingVerio03_space-other_T2star_seg-manual.nii.gz => sub-beijingVerio03_space-other_T2star_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-beijingVerio03/anat/{sub-beijingVerio03_space-other_T2w_seg-manual.json => sub-beijingVerio03_space-other_T2w_label-SC_seg.json} (100%) rename derivatives/labels/sub-beijingVerio03/anat/{sub-beijingVerio03_space-other_T2w_seg-manual.nii.gz => sub-beijingVerio03_space-other_T2w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-beijingVerio03/anat/{sub-beijingVerio03_space-other_T2w_labels-disc-manual.json => sub-beijingVerio03_space-other_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-beijingVerio03/anat/{sub-beijingVerio03_space-other_T2w_labels-disc-manual.nii.gz => sub-beijingVerio03_space-other_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-beijingVerio03/dwi/{sub-beijingVerio03_rec-average_dwi_seg-manual.json => sub-beijingVerio03_rec-average_dwi_label-SC_seg.json} (100%) rename derivatives/labels/sub-beijingVerio03/dwi/{sub-beijingVerio03_rec-average_dwi_seg-manual.nii.gz => sub-beijingVerio03_rec-average_dwi_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-beijingVerio04/anat/{sub-beijingVerio04_space-other_T1w_seg-manual.json => sub-beijingVerio04_space-other_T1w_label-SC_seg.json} (100%) rename derivatives/labels/sub-beijingVerio04/anat/{sub-beijingVerio04_space-other_T1w_seg-manual.nii.gz => sub-beijingVerio04_space-other_T1w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-beijingVerio04/anat/{sub-beijingVerio04_space-other_T1w_labels-disc-manual.json => sub-beijingVerio04_space-other_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-beijingVerio04/anat/{sub-beijingVerio04_space-other_T1w_labels-disc-manual.nii.gz => sub-beijingVerio04_space-other_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-beijingVerio04/anat/{sub-beijingVerio04_space-other_T2star_seg-manual.json => sub-beijingVerio04_space-other_T2star_label-SC_seg.json} (100%) rename derivatives/labels/sub-beijingVerio04/anat/{sub-beijingVerio04_space-other_T2star_seg-manual.nii.gz => sub-beijingVerio04_space-other_T2star_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-beijingVerio04/anat/{sub-beijingVerio04_space-other_T2w_seg-manual.json => sub-beijingVerio04_space-other_T2w_label-SC_seg.json} (100%) rename derivatives/labels/sub-beijingVerio04/anat/{sub-beijingVerio04_space-other_T2w_seg-manual.nii.gz => sub-beijingVerio04_space-other_T2w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-beijingVerio04/anat/{sub-beijingVerio04_space-other_T2w_labels-disc-manual.json => sub-beijingVerio04_space-other_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-beijingVerio04/anat/{sub-beijingVerio04_space-other_T2w_labels-disc-manual.nii.gz => sub-beijingVerio04_space-other_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-beijingVerio04/dwi/{sub-beijingVerio04_rec-average_dwi_seg-manual.json => sub-beijingVerio04_rec-average_dwi_label-SC_seg.json} (100%) rename derivatives/labels/sub-beijingVerio04/dwi/{sub-beijingVerio04_rec-average_dwi_seg-manual.nii.gz => sub-beijingVerio04_rec-average_dwi_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-brnoCeitec01/anat/{sub-brnoCeitec01_flip-1_mt-on_space-other_MTS_seg-manual.json => sub-brnoCeitec01_flip-1_mt-on_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-brnoCeitec01/anat/{sub-brnoCeitec01_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz => sub-brnoCeitec01_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-brnoCeitec01/anat/{sub-brnoCeitec01_flip-2_mt-off_space-other_MTS_seg-manual.json => sub-brnoCeitec01_flip-2_mt-off_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-brnoCeitec01/anat/{sub-brnoCeitec01_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz => sub-brnoCeitec01_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-brnoCeitec01/anat/{sub-brnoCeitec01_space-other_T1w_seg-manual.json => sub-brnoCeitec01_space-other_T1w_label-SC_seg.json} (100%) rename derivatives/labels/sub-brnoCeitec01/anat/{sub-brnoCeitec01_space-other_T1w_seg-manual.nii.gz => sub-brnoCeitec01_space-other_T1w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-brnoCeitec01/anat/{sub-brnoCeitec01_space-other_T1w_labels-disc-manual.json => sub-brnoCeitec01_space-other_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-brnoCeitec01/anat/{sub-brnoCeitec01_space-other_T1w_labels-disc-manual.nii.gz => sub-brnoCeitec01_space-other_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-brnoCeitec01/anat/{sub-brnoCeitec01_space-other_T2star_seg-manual.json => sub-brnoCeitec01_space-other_T2star_label-SC_seg.json} (100%) rename derivatives/labels/sub-brnoCeitec01/anat/{sub-brnoCeitec01_space-other_T2star_seg-manual.nii.gz => sub-brnoCeitec01_space-other_T2star_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-brnoCeitec01/anat/{sub-brnoCeitec01_space-other_T2w_seg-manual.json => sub-brnoCeitec01_space-other_T2w_label-SC_seg.json} (100%) rename derivatives/labels/sub-brnoCeitec01/anat/{sub-brnoCeitec01_space-other_T2w_seg-manual.nii.gz => sub-brnoCeitec01_space-other_T2w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-brnoCeitec01/anat/{sub-brnoCeitec01_space-other_T2w_labels-disc-manual.json => sub-brnoCeitec01_space-other_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-brnoCeitec01/anat/{sub-brnoCeitec01_space-other_T2w_labels-disc-manual.nii.gz => sub-brnoCeitec01_space-other_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-brnoCeitec01/dwi/{sub-brnoCeitec01_rec-average_dwi_seg-manual.json => sub-brnoCeitec01_rec-average_dwi_label-SC_seg.json} (100%) rename derivatives/labels/sub-brnoCeitec01/dwi/{sub-brnoCeitec01_rec-average_dwi_seg-manual.nii.gz => sub-brnoCeitec01_rec-average_dwi_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-brnoCeitec02/anat/{sub-brnoCeitec02_flip-1_mt-on_space-other_MTS_seg-manual.json => sub-brnoCeitec02_flip-1_mt-on_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-brnoCeitec02/anat/{sub-brnoCeitec02_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz => sub-brnoCeitec02_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-brnoCeitec02/anat/{sub-brnoCeitec02_flip-2_mt-off_space-other_MTS_seg-manual.json => sub-brnoCeitec02_flip-2_mt-off_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-brnoCeitec02/anat/{sub-brnoCeitec02_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz => sub-brnoCeitec02_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-brnoCeitec02/anat/{sub-brnoCeitec02_space-other_T1w_seg-manual.json => sub-brnoCeitec02_space-other_T1w_label-SC_seg.json} (100%) rename derivatives/labels/sub-brnoCeitec02/anat/{sub-brnoCeitec02_space-other_T1w_seg-manual.nii.gz => sub-brnoCeitec02_space-other_T1w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-brnoCeitec02/anat/{sub-brnoCeitec02_space-other_T1w_labels-disc-manual.json => sub-brnoCeitec02_space-other_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-brnoCeitec02/anat/{sub-brnoCeitec02_space-other_T1w_labels-disc-manual.nii.gz => sub-brnoCeitec02_space-other_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-brnoCeitec02/anat/{sub-brnoCeitec02_space-other_T2star_seg-manual.json => sub-brnoCeitec02_space-other_T2star_label-SC_seg.json} (100%) rename derivatives/labels/sub-brnoCeitec02/anat/{sub-brnoCeitec02_space-other_T2star_seg-manual.nii.gz => sub-brnoCeitec02_space-other_T2star_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-brnoCeitec02/anat/{sub-brnoCeitec02_space-other_T2w_seg-manual.json => sub-brnoCeitec02_space-other_T2w_label-SC_seg.json} (100%) rename derivatives/labels/sub-brnoCeitec02/anat/{sub-brnoCeitec02_space-other_T2w_seg-manual.nii.gz => sub-brnoCeitec02_space-other_T2w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-brnoCeitec02/anat/{sub-brnoCeitec02_space-other_T2w_labels-disc-manual.json => sub-brnoCeitec02_space-other_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-brnoCeitec02/anat/{sub-brnoCeitec02_space-other_T2w_labels-disc-manual.nii.gz => sub-brnoCeitec02_space-other_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-brnoCeitec02/dwi/{sub-brnoCeitec02_rec-average_dwi_seg-manual.json => sub-brnoCeitec02_rec-average_dwi_label-SC_seg.json} (100%) rename derivatives/labels/sub-brnoCeitec02/dwi/{sub-brnoCeitec02_rec-average_dwi_seg-manual.nii.gz => sub-brnoCeitec02_rec-average_dwi_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-brnoCeitec03/anat/{sub-brnoCeitec03_flip-1_mt-on_space-other_MTS_seg-manual.json => sub-brnoCeitec03_flip-1_mt-on_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-brnoCeitec03/anat/{sub-brnoCeitec03_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz => sub-brnoCeitec03_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-brnoCeitec03/anat/{sub-brnoCeitec03_flip-2_mt-off_space-other_MTS_seg-manual.json => sub-brnoCeitec03_flip-2_mt-off_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-brnoCeitec03/anat/{sub-brnoCeitec03_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz => sub-brnoCeitec03_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-brnoCeitec03/anat/{sub-brnoCeitec03_space-other_T1w_seg-manual.json => sub-brnoCeitec03_space-other_T1w_label-SC_seg.json} (100%) rename derivatives/labels/sub-brnoCeitec03/anat/{sub-brnoCeitec03_space-other_T1w_seg-manual.nii.gz => sub-brnoCeitec03_space-other_T1w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-brnoCeitec03/anat/{sub-brnoCeitec03_space-other_T1w_labels-disc-manual.json => sub-brnoCeitec03_space-other_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-brnoCeitec03/anat/{sub-brnoCeitec03_space-other_T1w_labels-disc-manual.nii.gz => sub-brnoCeitec03_space-other_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-brnoCeitec03/anat/{sub-brnoCeitec03_space-other_T2star_seg-manual.json => sub-brnoCeitec03_space-other_T2star_label-SC_seg.json} (100%) rename derivatives/labels/sub-brnoCeitec03/anat/{sub-brnoCeitec03_space-other_T2star_seg-manual.nii.gz => sub-brnoCeitec03_space-other_T2star_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-brnoCeitec03/anat/{sub-brnoCeitec03_space-other_T2w_seg-manual.json => sub-brnoCeitec03_space-other_T2w_label-SC_seg.json} (100%) rename derivatives/labels/sub-brnoCeitec03/anat/{sub-brnoCeitec03_space-other_T2w_seg-manual.nii.gz => sub-brnoCeitec03_space-other_T2w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-brnoCeitec03/anat/{sub-brnoCeitec03_space-other_T2w_labels-disc-manual.json => sub-brnoCeitec03_space-other_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-brnoCeitec03/anat/{sub-brnoCeitec03_space-other_T2w_labels-disc-manual.nii.gz => sub-brnoCeitec03_space-other_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-brnoCeitec03/dwi/{sub-brnoCeitec03_rec-average_dwi_seg-manual.json => sub-brnoCeitec03_rec-average_dwi_label-SC_seg.json} (100%) rename derivatives/labels/sub-brnoCeitec03/dwi/{sub-brnoCeitec03_rec-average_dwi_seg-manual.nii.gz => sub-brnoCeitec03_rec-average_dwi_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-brnoCeitec04/anat/{sub-brnoCeitec04_flip-1_mt-on_space-other_MTS_seg-manual.json => sub-brnoCeitec04_flip-1_mt-on_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-brnoCeitec04/anat/{sub-brnoCeitec04_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz => sub-brnoCeitec04_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-brnoCeitec04/anat/{sub-brnoCeitec04_flip-2_mt-off_space-other_MTS_seg-manual.json => sub-brnoCeitec04_flip-2_mt-off_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-brnoCeitec04/anat/{sub-brnoCeitec04_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz => sub-brnoCeitec04_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-brnoCeitec04/anat/{sub-brnoCeitec04_space-other_T1w_seg-manual.json => sub-brnoCeitec04_space-other_T1w_label-SC_seg.json} (100%) rename derivatives/labels/sub-brnoCeitec04/anat/{sub-brnoCeitec04_space-other_T1w_seg-manual.nii.gz => sub-brnoCeitec04_space-other_T1w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-brnoCeitec04/anat/{sub-brnoCeitec04_space-other_T1w_labels-disc-manual.json => sub-brnoCeitec04_space-other_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-brnoCeitec04/anat/{sub-brnoCeitec04_space-other_T1w_labels-disc-manual.nii.gz => sub-brnoCeitec04_space-other_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-brnoCeitec04/anat/{sub-brnoCeitec04_space-other_T2star_seg-manual.json => sub-brnoCeitec04_space-other_T2star_label-SC_seg.json} (100%) rename derivatives/labels/sub-brnoCeitec04/anat/{sub-brnoCeitec04_space-other_T2star_seg-manual.nii.gz => sub-brnoCeitec04_space-other_T2star_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-brnoCeitec04/anat/{sub-brnoCeitec04_space-other_T2w_seg-manual.json => sub-brnoCeitec04_space-other_T2w_label-SC_seg.json} (100%) rename derivatives/labels/sub-brnoCeitec04/anat/{sub-brnoCeitec04_space-other_T2w_seg-manual.nii.gz => sub-brnoCeitec04_space-other_T2w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-brnoCeitec04/anat/{sub-brnoCeitec04_space-other_T2w_labels-disc-manual.json => sub-brnoCeitec04_space-other_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-brnoCeitec04/anat/{sub-brnoCeitec04_space-other_T2w_labels-disc-manual.nii.gz => sub-brnoCeitec04_space-other_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-brnoCeitec04/dwi/{sub-brnoCeitec04_rec-average_dwi_seg-manual.json => sub-brnoCeitec04_rec-average_dwi_label-SC_seg.json} (100%) rename derivatives/labels/sub-brnoCeitec04/dwi/{sub-brnoCeitec04_rec-average_dwi_seg-manual.nii.gz => sub-brnoCeitec04_rec-average_dwi_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-brnoCeitec05/anat/{sub-brnoCeitec05_flip-1_mt-on_space-other_MTS_seg-manual.json => sub-brnoCeitec05_flip-1_mt-on_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-brnoCeitec05/anat/{sub-brnoCeitec05_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz => sub-brnoCeitec05_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-brnoCeitec05/anat/{sub-brnoCeitec05_flip-2_mt-off_space-other_MTS_seg-manual.json => sub-brnoCeitec05_flip-2_mt-off_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-brnoCeitec05/anat/{sub-brnoCeitec05_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz => sub-brnoCeitec05_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-brnoCeitec05/anat/{sub-brnoCeitec05_space-other_T1w_seg-manual.json => sub-brnoCeitec05_space-other_T1w_label-SC_seg.json} (100%) rename derivatives/labels/sub-brnoCeitec05/anat/{sub-brnoCeitec05_space-other_T1w_seg-manual.nii.gz => sub-brnoCeitec05_space-other_T1w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-brnoCeitec05/anat/{sub-brnoCeitec05_space-other_T1w_labels-disc-manual.json => sub-brnoCeitec05_space-other_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-brnoCeitec05/anat/{sub-brnoCeitec05_space-other_T1w_labels-disc-manual.nii.gz => sub-brnoCeitec05_space-other_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-brnoCeitec05/anat/{sub-brnoCeitec05_space-other_T2star_seg-manual.json => sub-brnoCeitec05_space-other_T2star_label-SC_seg.json} (100%) rename derivatives/labels/sub-brnoCeitec05/anat/{sub-brnoCeitec05_space-other_T2star_seg-manual.nii.gz => sub-brnoCeitec05_space-other_T2star_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-brnoCeitec05/anat/{sub-brnoCeitec05_space-other_T2w_seg-manual.json => sub-brnoCeitec05_space-other_T2w_label-SC_seg.json} (100%) rename derivatives/labels/sub-brnoCeitec05/anat/{sub-brnoCeitec05_space-other_T2w_seg-manual.nii.gz => sub-brnoCeitec05_space-other_T2w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-brnoCeitec05/anat/{sub-brnoCeitec05_space-other_T2w_labels-disc-manual.json => sub-brnoCeitec05_space-other_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-brnoCeitec05/anat/{sub-brnoCeitec05_space-other_T2w_labels-disc-manual.nii.gz => sub-brnoCeitec05_space-other_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-brnoCeitec05/dwi/{sub-brnoCeitec05_rec-average_dwi_seg-manual.json => sub-brnoCeitec05_rec-average_dwi_label-SC_seg.json} (100%) rename derivatives/labels/sub-brnoCeitec05/dwi/{sub-brnoCeitec05_rec-average_dwi_seg-manual.nii.gz => sub-brnoCeitec05_rec-average_dwi_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-brnoCeitec06/anat/{sub-brnoCeitec06_flip-1_mt-on_space-other_MTS_seg-manual.json => sub-brnoCeitec06_flip-1_mt-on_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-brnoCeitec06/anat/{sub-brnoCeitec06_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz => sub-brnoCeitec06_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-brnoCeitec06/anat/{sub-brnoCeitec06_flip-2_mt-off_space-other_MTS_seg-manual.json => sub-brnoCeitec06_flip-2_mt-off_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-brnoCeitec06/anat/{sub-brnoCeitec06_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz => sub-brnoCeitec06_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-brnoCeitec06/anat/{sub-brnoCeitec06_space-other_T1w_seg-manual.json => sub-brnoCeitec06_space-other_T1w_label-SC_seg.json} (100%) rename derivatives/labels/sub-brnoCeitec06/anat/{sub-brnoCeitec06_space-other_T1w_seg-manual.nii.gz => sub-brnoCeitec06_space-other_T1w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-brnoCeitec06/anat/{sub-brnoCeitec06_space-other_T1w_labels-disc-manual.json => sub-brnoCeitec06_space-other_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-brnoCeitec06/anat/{sub-brnoCeitec06_space-other_T1w_labels-disc-manual.nii.gz => sub-brnoCeitec06_space-other_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-brnoCeitec06/anat/{sub-brnoCeitec06_space-other_T2star_seg-manual.json => sub-brnoCeitec06_space-other_T2star_label-SC_seg.json} (100%) rename derivatives/labels/sub-brnoCeitec06/anat/{sub-brnoCeitec06_space-other_T2star_seg-manual.nii.gz => sub-brnoCeitec06_space-other_T2star_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-brnoCeitec06/anat/{sub-brnoCeitec06_space-other_T2w_seg-manual.json => sub-brnoCeitec06_space-other_T2w_label-SC_seg.json} (100%) rename derivatives/labels/sub-brnoCeitec06/anat/{sub-brnoCeitec06_space-other_T2w_seg-manual.nii.gz => sub-brnoCeitec06_space-other_T2w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-brnoCeitec06/anat/{sub-brnoCeitec06_space-other_T2w_labels-disc-manual.json => sub-brnoCeitec06_space-other_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-brnoCeitec06/anat/{sub-brnoCeitec06_space-other_T2w_labels-disc-manual.nii.gz => sub-brnoCeitec06_space-other_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-brnoCeitec06/dwi/{sub-brnoCeitec06_rec-average_dwi_seg-manual.json => sub-brnoCeitec06_rec-average_dwi_label-SC_seg.json} (100%) rename derivatives/labels/sub-brnoCeitec06/dwi/{sub-brnoCeitec06_rec-average_dwi_seg-manual.nii.gz => sub-brnoCeitec06_rec-average_dwi_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-brnoUhb01/anat/{sub-brnoUhb01_flip-1_mt-on_space-other_MTS_seg-manual.json => sub-brnoUhb01_flip-1_mt-on_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-brnoUhb01/anat/{sub-brnoUhb01_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz => sub-brnoUhb01_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-brnoUhb01/anat/{sub-brnoUhb01_flip-2_mt-off_space-other_MTS_seg-manual.json => sub-brnoUhb01_flip-2_mt-off_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-brnoUhb01/anat/{sub-brnoUhb01_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz => sub-brnoUhb01_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-brnoUhb01/anat/{sub-brnoUhb01_space-other_T1w_seg-manual.json => sub-brnoUhb01_space-other_T1w_label-SC_seg.json} (100%) rename derivatives/labels/sub-brnoUhb01/anat/{sub-brnoUhb01_space-other_T1w_seg-manual.nii.gz => sub-brnoUhb01_space-other_T1w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-brnoUhb01/anat/{sub-brnoUhb01_space-other_T1w_labels-disc-manual.json => sub-brnoUhb01_space-other_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-brnoUhb01/anat/{sub-brnoUhb01_space-other_T1w_labels-disc-manual.nii.gz => sub-brnoUhb01_space-other_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-brnoUhb01/anat/{sub-brnoUhb01_space-other_T2star_seg-manual.json => sub-brnoUhb01_space-other_T2star_label-SC_seg.json} (100%) rename derivatives/labels/sub-brnoUhb01/anat/{sub-brnoUhb01_space-other_T2star_seg-manual.nii.gz => sub-brnoUhb01_space-other_T2star_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-brnoUhb01/anat/{sub-brnoUhb01_space-other_T2w_seg-manual.json => sub-brnoUhb01_space-other_T2w_label-SC_seg.json} (100%) rename derivatives/labels/sub-brnoUhb01/anat/{sub-brnoUhb01_space-other_T2w_seg-manual.nii.gz => sub-brnoUhb01_space-other_T2w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-brnoUhb01/anat/{sub-brnoUhb01_space-other_T2w_labels-disc-manual.json => sub-brnoUhb01_space-other_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-brnoUhb01/anat/{sub-brnoUhb01_space-other_T2w_labels-disc-manual.nii.gz => sub-brnoUhb01_space-other_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-brnoUhb01/dwi/{sub-brnoUhb01_rec-average_dwi_seg-manual.json => sub-brnoUhb01_rec-average_dwi_label-SC_seg.json} (100%) rename derivatives/labels/sub-brnoUhb01/dwi/{sub-brnoUhb01_rec-average_dwi_seg-manual.nii.gz => sub-brnoUhb01_rec-average_dwi_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-brnoUhb02/anat/{sub-brnoUhb02_flip-1_mt-on_space-other_MTS_seg-manual.json => sub-brnoUhb02_flip-1_mt-on_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-brnoUhb02/anat/{sub-brnoUhb02_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz => sub-brnoUhb02_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-brnoUhb02/anat/{sub-brnoUhb02_flip-2_mt-off_space-other_MTS_seg-manual.json => sub-brnoUhb02_flip-2_mt-off_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-brnoUhb02/anat/{sub-brnoUhb02_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz => sub-brnoUhb02_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-brnoUhb02/anat/{sub-brnoUhb02_space-other_T1w_seg-manual.json => sub-brnoUhb02_space-other_T1w_label-SC_seg.json} (100%) rename derivatives/labels/sub-brnoUhb02/anat/{sub-brnoUhb02_space-other_T1w_seg-manual.nii.gz => sub-brnoUhb02_space-other_T1w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-brnoUhb02/anat/{sub-brnoUhb02_space-other_T1w_labels-disc-manual.json => sub-brnoUhb02_space-other_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-brnoUhb02/anat/{sub-brnoUhb02_space-other_T1w_labels-disc-manual.nii.gz => sub-brnoUhb02_space-other_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-brnoUhb02/anat/{sub-brnoUhb02_space-other_T2star_seg-manual.json => sub-brnoUhb02_space-other_T2star_label-SC_seg.json} (100%) rename derivatives/labels/sub-brnoUhb02/anat/{sub-brnoUhb02_space-other_T2star_seg-manual.nii.gz => sub-brnoUhb02_space-other_T2star_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-brnoUhb02/anat/{sub-brnoUhb02_space-other_T2w_seg-manual.json => sub-brnoUhb02_space-other_T2w_label-SC_seg.json} (100%) rename derivatives/labels/sub-brnoUhb02/anat/{sub-brnoUhb02_space-other_T2w_seg-manual.nii.gz => sub-brnoUhb02_space-other_T2w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-brnoUhb02/anat/{sub-brnoUhb02_space-other_T2w_labels-disc-manual.json => sub-brnoUhb02_space-other_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-brnoUhb02/anat/{sub-brnoUhb02_space-other_T2w_labels-disc-manual.nii.gz => sub-brnoUhb02_space-other_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-brnoUhb02/dwi/{sub-brnoUhb02_rec-average_dwi_seg-manual.json => sub-brnoUhb02_rec-average_dwi_label-SC_seg.json} (100%) rename derivatives/labels/sub-brnoUhb02/dwi/{sub-brnoUhb02_rec-average_dwi_seg-manual.nii.gz => sub-brnoUhb02_rec-average_dwi_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-brnoUhb03/anat/{sub-brnoUhb03_flip-1_mt-on_space-other_MTS_seg-manual.json => sub-brnoUhb03_flip-1_mt-on_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-brnoUhb03/anat/{sub-brnoUhb03_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz => sub-brnoUhb03_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-brnoUhb03/anat/{sub-brnoUhb03_flip-2_mt-off_space-other_MTS_seg-manual.json => sub-brnoUhb03_flip-2_mt-off_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-brnoUhb03/anat/{sub-brnoUhb03_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz => sub-brnoUhb03_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-brnoUhb03/anat/{sub-brnoUhb03_space-other_T1w_seg-manual.json => sub-brnoUhb03_space-other_T1w_label-SC_seg.json} (100%) rename derivatives/labels/sub-brnoUhb03/anat/{sub-brnoUhb03_space-other_T1w_seg-manual.nii.gz => sub-brnoUhb03_space-other_T1w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-brnoUhb03/anat/{sub-brnoUhb03_space-other_T1w_labels-disc-manual.json => sub-brnoUhb03_space-other_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-brnoUhb03/anat/{sub-brnoUhb03_space-other_T1w_labels-disc-manual.nii.gz => sub-brnoUhb03_space-other_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-brnoUhb03/anat/{sub-brnoUhb03_space-other_T2star_seg-manual.json => sub-brnoUhb03_space-other_T2star_label-SC_seg.json} (100%) rename derivatives/labels/sub-brnoUhb03/anat/{sub-brnoUhb03_space-other_T2star_seg-manual.nii.gz => sub-brnoUhb03_space-other_T2star_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-brnoUhb03/anat/{sub-brnoUhb03_space-other_T2w_seg-manual.json => sub-brnoUhb03_space-other_T2w_label-SC_seg.json} (100%) rename derivatives/labels/sub-brnoUhb03/anat/{sub-brnoUhb03_space-other_T2w_seg-manual.nii.gz => sub-brnoUhb03_space-other_T2w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-brnoUhb03/anat/{sub-brnoUhb03_space-other_T2w_labels-disc-manual.json => sub-brnoUhb03_space-other_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-brnoUhb03/anat/{sub-brnoUhb03_space-other_T2w_labels-disc-manual.nii.gz => sub-brnoUhb03_space-other_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-brnoUhb03/dwi/{sub-brnoUhb03_rec-average_dwi_seg-manual.json => sub-brnoUhb03_rec-average_dwi_label-SC_seg.json} (100%) rename derivatives/labels/sub-brnoUhb03/dwi/{sub-brnoUhb03_rec-average_dwi_seg-manual.nii.gz => sub-brnoUhb03_rec-average_dwi_label-SC_seg.nii.gz} 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sub-brnoUhb04_space-other_T1w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-brnoUhb04/anat/{sub-brnoUhb04_space-other_T1w_labels-disc-manual.json => sub-brnoUhb04_space-other_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-brnoUhb04/anat/{sub-brnoUhb04_space-other_T1w_labels-disc-manual.nii.gz => sub-brnoUhb04_space-other_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-brnoUhb04/anat/{sub-brnoUhb04_space-other_T2star_seg-manual.json => sub-brnoUhb04_space-other_T2star_label-SC_seg.json} (100%) rename derivatives/labels/sub-brnoUhb04/anat/{sub-brnoUhb04_space-other_T2star_seg-manual.nii.gz => sub-brnoUhb04_space-other_T2star_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-brnoUhb04/anat/{sub-brnoUhb04_space-other_T2w_seg-manual.json => sub-brnoUhb04_space-other_T2w_label-SC_seg.json} (100%) rename derivatives/labels/sub-brnoUhb04/anat/{sub-brnoUhb04_space-other_T2w_seg-manual.nii.gz => sub-brnoUhb04_space-other_T2w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-brnoUhb04/anat/{sub-brnoUhb04_space-other_T2w_labels-disc-manual.json => sub-brnoUhb04_space-other_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-brnoUhb04/anat/{sub-brnoUhb04_space-other_T2w_labels-disc-manual.nii.gz => sub-brnoUhb04_space-other_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-brnoUhb04/dwi/{sub-brnoUhb04_rec-average_dwi_seg-manual.json => sub-brnoUhb04_rec-average_dwi_label-SC_seg.json} (100%) rename derivatives/labels/sub-brnoUhb04/dwi/{sub-brnoUhb04_rec-average_dwi_seg-manual.nii.gz => sub-brnoUhb04_rec-average_dwi_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-brnoUhb05/anat/{sub-brnoUhb05_flip-1_mt-on_space-other_MTS_seg-manual.json => sub-brnoUhb05_flip-1_mt-on_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-brnoUhb05/anat/{sub-brnoUhb05_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz => sub-brnoUhb05_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-brnoUhb05/anat/{sub-brnoUhb05_flip-2_mt-off_space-other_MTS_seg-manual.json => sub-brnoUhb05_flip-2_mt-off_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-brnoUhb05/anat/{sub-brnoUhb05_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz => sub-brnoUhb05_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-brnoUhb05/anat/{sub-brnoUhb05_space-other_T1w_seg-manual.json => sub-brnoUhb05_space-other_T1w_label-SC_seg.json} (100%) rename derivatives/labels/sub-brnoUhb05/anat/{sub-brnoUhb05_space-other_T1w_seg-manual.nii.gz => sub-brnoUhb05_space-other_T1w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-brnoUhb05/anat/{sub-brnoUhb05_space-other_T1w_labels-disc-manual.json => sub-brnoUhb05_space-other_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-brnoUhb05/anat/{sub-brnoUhb05_space-other_T1w_labels-disc-manual.nii.gz => sub-brnoUhb05_space-other_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-brnoUhb05/anat/{sub-brnoUhb05_space-other_T2star_seg-manual.json => sub-brnoUhb05_space-other_T2star_label-SC_seg.json} (100%) rename derivatives/labels/sub-brnoUhb05/anat/{sub-brnoUhb05_space-other_T2star_seg-manual.nii.gz => sub-brnoUhb05_space-other_T2star_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-brnoUhb05/anat/{sub-brnoUhb05_space-other_T2w_seg-manual.json => sub-brnoUhb05_space-other_T2w_label-SC_seg.json} (100%) rename derivatives/labels/sub-brnoUhb05/anat/{sub-brnoUhb05_space-other_T2w_seg-manual.nii.gz => sub-brnoUhb05_space-other_T2w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-brnoUhb05/anat/{sub-brnoUhb05_space-other_T2w_labels-disc-manual.json => sub-brnoUhb05_space-other_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-brnoUhb05/anat/{sub-brnoUhb05_space-other_T2w_labels-disc-manual.nii.gz => sub-brnoUhb05_space-other_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-brnoUhb05/dwi/{sub-brnoUhb05_rec-average_dwi_seg-manual.json => sub-brnoUhb05_rec-average_dwi_label-SC_seg.json} (100%) rename derivatives/labels/sub-brnoUhb05/dwi/{sub-brnoUhb05_rec-average_dwi_seg-manual.nii.gz => sub-brnoUhb05_rec-average_dwi_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-brnoUhb06/anat/{sub-brnoUhb06_flip-1_mt-on_space-other_MTS_seg-manual.json => sub-brnoUhb06_flip-1_mt-on_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-brnoUhb06/anat/{sub-brnoUhb06_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz => sub-brnoUhb06_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-brnoUhb06/anat/{sub-brnoUhb06_flip-2_mt-off_space-other_MTS_seg-manual.json => sub-brnoUhb06_flip-2_mt-off_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-brnoUhb06/anat/{sub-brnoUhb06_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz => sub-brnoUhb06_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-brnoUhb06/anat/{sub-brnoUhb06_space-other_T1w_seg-manual.json => sub-brnoUhb06_space-other_T1w_label-SC_seg.json} (100%) rename derivatives/labels/sub-brnoUhb06/anat/{sub-brnoUhb06_space-other_T1w_seg-manual.nii.gz => sub-brnoUhb06_space-other_T1w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-brnoUhb06/anat/{sub-brnoUhb06_space-other_T1w_labels-disc-manual.json => sub-brnoUhb06_space-other_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-brnoUhb06/anat/{sub-brnoUhb06_space-other_T1w_labels-disc-manual.nii.gz => sub-brnoUhb06_space-other_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-brnoUhb06/anat/{sub-brnoUhb06_space-other_T2star_seg-manual.json => sub-brnoUhb06_space-other_T2star_label-SC_seg.json} (100%) rename derivatives/labels/sub-brnoUhb06/anat/{sub-brnoUhb06_space-other_T2star_seg-manual.nii.gz => sub-brnoUhb06_space-other_T2star_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-brnoUhb06/anat/{sub-brnoUhb06_space-other_T2w_seg-manual.json => sub-brnoUhb06_space-other_T2w_label-SC_seg.json} (100%) rename derivatives/labels/sub-brnoUhb06/anat/{sub-brnoUhb06_space-other_T2w_seg-manual.nii.gz => sub-brnoUhb06_space-other_T2w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-brnoUhb06/anat/{sub-brnoUhb06_space-other_T2w_labels-disc-manual.json => sub-brnoUhb06_space-other_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-brnoUhb06/anat/{sub-brnoUhb06_space-other_T2w_labels-disc-manual.nii.gz => sub-brnoUhb06_space-other_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-brnoUhb06/dwi/{sub-brnoUhb06_rec-average_dwi_seg-manual.json => sub-brnoUhb06_rec-average_dwi_label-SC_seg.json} (100%) rename derivatives/labels/sub-brnoUhb06/dwi/{sub-brnoUhb06_rec-average_dwi_seg-manual.nii.gz => sub-brnoUhb06_rec-average_dwi_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-brnoUhb07/anat/{sub-brnoUhb07_flip-1_mt-on_space-other_MTS_seg-manual.json => sub-brnoUhb07_flip-1_mt-on_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-brnoUhb07/anat/{sub-brnoUhb07_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz => sub-brnoUhb07_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-brnoUhb07/anat/{sub-brnoUhb07_flip-2_mt-off_space-other_MTS_seg-manual.json => sub-brnoUhb07_flip-2_mt-off_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-brnoUhb07/anat/{sub-brnoUhb07_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz => sub-brnoUhb07_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-brnoUhb07/anat/{sub-brnoUhb07_space-other_T1w_seg-manual.json => sub-brnoUhb07_space-other_T1w_label-SC_seg.json} (100%) rename derivatives/labels/sub-brnoUhb07/anat/{sub-brnoUhb07_space-other_T1w_seg-manual.nii.gz => sub-brnoUhb07_space-other_T1w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-brnoUhb07/anat/{sub-brnoUhb07_space-other_T1w_labels-disc-manual.json => sub-brnoUhb07_space-other_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-brnoUhb07/anat/{sub-brnoUhb07_space-other_T1w_labels-disc-manual.nii.gz => sub-brnoUhb07_space-other_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-brnoUhb07/anat/{sub-brnoUhb07_space-other_T2star_seg-manual.json => sub-brnoUhb07_space-other_T2star_label-SC_seg.json} (100%) rename derivatives/labels/sub-brnoUhb07/anat/{sub-brnoUhb07_space-other_T2star_seg-manual.nii.gz => sub-brnoUhb07_space-other_T2star_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-brnoUhb07/anat/{sub-brnoUhb07_space-other_T2w_seg-manual.json => sub-brnoUhb07_space-other_T2w_label-SC_seg.json} (100%) rename derivatives/labels/sub-brnoUhb07/anat/{sub-brnoUhb07_space-other_T2w_seg-manual.nii.gz => sub-brnoUhb07_space-other_T2w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-brnoUhb07/anat/{sub-brnoUhb07_space-other_T2w_labels-disc-manual.json => sub-brnoUhb07_space-other_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-brnoUhb07/anat/{sub-brnoUhb07_space-other_T2w_labels-disc-manual.nii.gz => sub-brnoUhb07_space-other_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-brnoUhb07/dwi/{sub-brnoUhb07_rec-average_dwi_seg-manual.json => sub-brnoUhb07_rec-average_dwi_label-SC_seg.json} (100%) rename derivatives/labels/sub-brnoUhb07/dwi/{sub-brnoUhb07_rec-average_dwi_seg-manual.nii.gz => sub-brnoUhb07_rec-average_dwi_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-brnoUhb08/anat/{sub-brnoUhb08_flip-1_mt-on_space-other_MTS_seg-manual.json => sub-brnoUhb08_flip-1_mt-on_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-brnoUhb08/anat/{sub-brnoUhb08_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz => sub-brnoUhb08_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-brnoUhb08/anat/{sub-brnoUhb08_flip-2_mt-off_space-other_MTS_seg-manual.json => sub-brnoUhb08_flip-2_mt-off_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-brnoUhb08/anat/{sub-brnoUhb08_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz => sub-brnoUhb08_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-brnoUhb08/anat/{sub-brnoUhb08_space-other_T1w_seg-manual.json => sub-brnoUhb08_space-other_T1w_label-SC_seg.json} (100%) rename derivatives/labels/sub-brnoUhb08/anat/{sub-brnoUhb08_space-other_T1w_seg-manual.nii.gz => sub-brnoUhb08_space-other_T1w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-brnoUhb08/anat/{sub-brnoUhb08_space-other_T1w_labels-disc-manual.json => sub-brnoUhb08_space-other_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-brnoUhb08/anat/{sub-brnoUhb08_space-other_T1w_labels-disc-manual.nii.gz => sub-brnoUhb08_space-other_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-brnoUhb08/anat/{sub-brnoUhb08_space-other_T2star_seg-manual.json => sub-brnoUhb08_space-other_T2star_label-SC_seg.json} (100%) rename derivatives/labels/sub-brnoUhb08/anat/{sub-brnoUhb08_space-other_T2star_seg-manual.nii.gz => sub-brnoUhb08_space-other_T2star_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-brnoUhb08/anat/{sub-brnoUhb08_space-other_T2w_seg-manual.json => sub-brnoUhb08_space-other_T2w_label-SC_seg.json} (100%) rename derivatives/labels/sub-brnoUhb08/anat/{sub-brnoUhb08_space-other_T2w_seg-manual.nii.gz => sub-brnoUhb08_space-other_T2w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-brnoUhb08/anat/{sub-brnoUhb08_space-other_T2w_labels-disc-manual.json => sub-brnoUhb08_space-other_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-brnoUhb08/anat/{sub-brnoUhb08_space-other_T2w_labels-disc-manual.nii.gz => sub-brnoUhb08_space-other_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-brnoUhb08/dwi/{sub-brnoUhb08_rec-average_dwi_seg-manual.json => sub-brnoUhb08_rec-average_dwi_label-SC_seg.json} (100%) rename derivatives/labels/sub-brnoUhb08/dwi/{sub-brnoUhb08_rec-average_dwi_seg-manual.nii.gz => sub-brnoUhb08_rec-average_dwi_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-cardiff01/anat/{sub-cardiff01_flip-1_mt-on_space-other_MTS_seg-manual.json => sub-cardiff01_flip-1_mt-on_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-cardiff01/anat/{sub-cardiff01_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz => sub-cardiff01_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-cardiff01/anat/{sub-cardiff01_flip-2_mt-off_space-other_MTS_seg-manual.json => sub-cardiff01_flip-2_mt-off_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-cardiff01/anat/{sub-cardiff01_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz => sub-cardiff01_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-cardiff01/anat/{sub-cardiff01_space-other_T1w_seg-manual.json => sub-cardiff01_space-other_T1w_label-SC_seg.json} (100%) rename derivatives/labels/sub-cardiff01/anat/{sub-cardiff01_space-other_T1w_seg-manual.nii.gz => sub-cardiff01_space-other_T1w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-cardiff01/anat/{sub-cardiff01_space-other_T1w_labels-disc-manual.json => sub-cardiff01_space-other_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-cardiff01/anat/{sub-cardiff01_space-other_T1w_labels-disc-manual.nii.gz => sub-cardiff01_space-other_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-cardiff01/anat/{sub-cardiff01_space-other_T2star_seg-manual.json => sub-cardiff01_space-other_T2star_label-SC_seg.json} (100%) rename derivatives/labels/sub-cardiff01/anat/{sub-cardiff01_space-other_T2star_seg-manual.nii.gz => sub-cardiff01_space-other_T2star_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-cardiff01/anat/{sub-cardiff01_space-other_T2w_seg-manual.json => sub-cardiff01_space-other_T2w_label-SC_seg.json} (100%) rename derivatives/labels/sub-cardiff01/anat/{sub-cardiff01_space-other_T2w_seg-manual.nii.gz => sub-cardiff01_space-other_T2w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-cardiff01/anat/{sub-cardiff01_space-other_T2w_labels-disc-manual.json => sub-cardiff01_space-other_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-cardiff01/anat/{sub-cardiff01_space-other_T2w_labels-disc-manual.nii.gz => sub-cardiff01_space-other_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-cardiff01/dwi/{sub-cardiff01_rec-average_dwi_seg-manual.json => sub-cardiff01_rec-average_dwi_label-SC_seg.json} (100%) rename derivatives/labels/sub-cardiff01/dwi/{sub-cardiff01_rec-average_dwi_seg-manual.nii.gz => sub-cardiff01_rec-average_dwi_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-cardiff02/anat/{sub-cardiff02_flip-1_mt-on_space-other_MTS_seg-manual.json => sub-cardiff02_flip-1_mt-on_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-cardiff02/anat/{sub-cardiff02_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz => sub-cardiff02_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-cardiff02/anat/{sub-cardiff02_flip-2_mt-off_space-other_MTS_seg-manual.json => sub-cardiff02_flip-2_mt-off_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-cardiff02/anat/{sub-cardiff02_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz => sub-cardiff02_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-cardiff02/anat/{sub-cardiff02_space-other_T1w_seg-manual.json => sub-cardiff02_space-other_T1w_label-SC_seg.json} (100%) rename derivatives/labels/sub-cardiff02/anat/{sub-cardiff02_space-other_T1w_seg-manual.nii.gz => sub-cardiff02_space-other_T1w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-cardiff02/anat/{sub-cardiff02_space-other_T1w_labels-disc-manual.json => sub-cardiff02_space-other_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-cardiff02/anat/{sub-cardiff02_space-other_T1w_labels-disc-manual.nii.gz => sub-cardiff02_space-other_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-cardiff02/anat/{sub-cardiff02_space-other_T2star_seg-manual.json => sub-cardiff02_space-other_T2star_label-SC_seg.json} (100%) rename derivatives/labels/sub-cardiff02/anat/{sub-cardiff02_space-other_T2star_seg-manual.nii.gz => sub-cardiff02_space-other_T2star_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-cardiff02/anat/{sub-cardiff02_space-other_T2w_seg-manual.json => sub-cardiff02_space-other_T2w_label-SC_seg.json} (100%) rename derivatives/labels/sub-cardiff02/anat/{sub-cardiff02_space-other_T2w_seg-manual.nii.gz => sub-cardiff02_space-other_T2w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-cardiff02/anat/{sub-cardiff02_space-other_T2w_labels-disc-manual.json => sub-cardiff02_space-other_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-cardiff02/anat/{sub-cardiff02_space-other_T2w_labels-disc-manual.nii.gz => sub-cardiff02_space-other_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-cardiff02/dwi/{sub-cardiff02_rec-average_dwi_seg-manual.json => sub-cardiff02_rec-average_dwi_label-SC_seg.json} (100%) rename derivatives/labels/sub-cardiff02/dwi/{sub-cardiff02_rec-average_dwi_seg-manual.nii.gz => sub-cardiff02_rec-average_dwi_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-cardiff03/anat/{sub-cardiff03_flip-1_mt-on_space-other_MTS_seg-manual.json => sub-cardiff03_flip-1_mt-on_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-cardiff03/anat/{sub-cardiff03_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz => sub-cardiff03_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-cardiff03/anat/{sub-cardiff03_flip-2_mt-off_space-other_MTS_seg-manual.json => sub-cardiff03_flip-2_mt-off_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-cardiff03/anat/{sub-cardiff03_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz => sub-cardiff03_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-cardiff03/anat/{sub-cardiff03_space-other_T1w_seg-manual.json => sub-cardiff03_space-other_T1w_label-SC_seg.json} (100%) rename derivatives/labels/sub-cardiff03/anat/{sub-cardiff03_space-other_T1w_seg-manual.nii.gz => sub-cardiff03_space-other_T1w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-cardiff03/anat/{sub-cardiff03_space-other_T1w_labels-disc-manual.json => sub-cardiff03_space-other_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-cardiff03/anat/{sub-cardiff03_space-other_T1w_labels-disc-manual.nii.gz => sub-cardiff03_space-other_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-cardiff03/anat/{sub-cardiff03_space-other_T2star_seg-manual.json => sub-cardiff03_space-other_T2star_label-SC_seg.json} (100%) rename derivatives/labels/sub-cardiff03/anat/{sub-cardiff03_space-other_T2star_seg-manual.nii.gz => sub-cardiff03_space-other_T2star_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-cardiff03/anat/{sub-cardiff03_space-other_T2w_seg-manual.json => sub-cardiff03_space-other_T2w_label-SC_seg.json} (100%) rename derivatives/labels/sub-cardiff03/anat/{sub-cardiff03_space-other_T2w_seg-manual.nii.gz => sub-cardiff03_space-other_T2w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-cardiff03/anat/{sub-cardiff03_space-other_T2w_labels-disc-manual.json => sub-cardiff03_space-other_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-cardiff03/anat/{sub-cardiff03_space-other_T2w_labels-disc-manual.nii.gz => sub-cardiff03_space-other_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-cardiff03/dwi/{sub-cardiff03_rec-average_dwi_seg-manual.json => sub-cardiff03_rec-average_dwi_label-SC_seg.json} (100%) rename derivatives/labels/sub-cardiff03/dwi/{sub-cardiff03_rec-average_dwi_seg-manual.nii.gz => sub-cardiff03_rec-average_dwi_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-cardiff04/anat/{sub-cardiff04_flip-1_mt-on_space-other_MTS_seg-manual.json => sub-cardiff04_flip-1_mt-on_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-cardiff04/anat/{sub-cardiff04_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz => sub-cardiff04_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-cardiff04/anat/{sub-cardiff04_flip-2_mt-off_space-other_MTS_seg-manual.json => sub-cardiff04_flip-2_mt-off_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-cardiff04/anat/{sub-cardiff04_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz => sub-cardiff04_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-cardiff04/anat/{sub-cardiff04_space-other_T1w_seg-manual.json => sub-cardiff04_space-other_T1w_label-SC_seg.json} (100%) rename derivatives/labels/sub-cardiff04/anat/{sub-cardiff04_space-other_T1w_seg-manual.nii.gz => sub-cardiff04_space-other_T1w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-cardiff04/anat/{sub-cardiff04_space-other_T1w_labels-disc-manual.json => sub-cardiff04_space-other_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-cardiff04/anat/{sub-cardiff04_space-other_T1w_labels-disc-manual.nii.gz => sub-cardiff04_space-other_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-cardiff04/anat/{sub-cardiff04_space-other_T2star_seg-manual.json => sub-cardiff04_space-other_T2star_label-SC_seg.json} (100%) rename derivatives/labels/sub-cardiff04/anat/{sub-cardiff04_space-other_T2star_seg-manual.nii.gz => sub-cardiff04_space-other_T2star_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-cardiff04/anat/{sub-cardiff04_space-other_T2w_seg-manual.json => sub-cardiff04_space-other_T2w_label-SC_seg.json} (100%) rename derivatives/labels/sub-cardiff04/anat/{sub-cardiff04_space-other_T2w_seg-manual.nii.gz => sub-cardiff04_space-other_T2w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-cardiff04/anat/{sub-cardiff04_space-other_T2w_labels-disc-manual.json => sub-cardiff04_space-other_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-cardiff04/anat/{sub-cardiff04_space-other_T2w_labels-disc-manual.nii.gz => sub-cardiff04_space-other_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-cardiff04/dwi/{sub-cardiff04_rec-average_dwi_seg-manual.json => sub-cardiff04_rec-average_dwi_label-SC_seg.json} (100%) rename derivatives/labels/sub-cardiff04/dwi/{sub-cardiff04_rec-average_dwi_seg-manual.nii.gz => sub-cardiff04_rec-average_dwi_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-cardiff05/anat/{sub-cardiff05_flip-1_mt-on_space-other_MTS_seg-manual.json => sub-cardiff05_flip-1_mt-on_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-cardiff05/anat/{sub-cardiff05_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz => sub-cardiff05_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-cardiff05/anat/{sub-cardiff05_flip-2_mt-off_space-other_MTS_seg-manual.json => sub-cardiff05_flip-2_mt-off_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-cardiff05/anat/{sub-cardiff05_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz => sub-cardiff05_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-cardiff05/anat/{sub-cardiff05_space-other_T1w_seg-manual.json => sub-cardiff05_space-other_T1w_label-SC_seg.json} (100%) rename derivatives/labels/sub-cardiff05/anat/{sub-cardiff05_space-other_T1w_seg-manual.nii.gz => sub-cardiff05_space-other_T1w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-cardiff05/anat/{sub-cardiff05_space-other_T1w_labels-disc-manual.json => sub-cardiff05_space-other_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-cardiff05/anat/{sub-cardiff05_space-other_T1w_labels-disc-manual.nii.gz => sub-cardiff05_space-other_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-cardiff05/anat/{sub-cardiff05_space-other_T2star_seg-manual.json => sub-cardiff05_space-other_T2star_label-SC_seg.json} (100%) rename derivatives/labels/sub-cardiff05/anat/{sub-cardiff05_space-other_T2star_seg-manual.nii.gz => sub-cardiff05_space-other_T2star_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-cardiff05/anat/{sub-cardiff05_space-other_T2w_seg-manual.json => sub-cardiff05_space-other_T2w_label-SC_seg.json} (100%) rename derivatives/labels/sub-cardiff05/anat/{sub-cardiff05_space-other_T2w_seg-manual.nii.gz => sub-cardiff05_space-other_T2w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-cardiff05/anat/{sub-cardiff05_space-other_T2w_labels-disc-manual.json => sub-cardiff05_space-other_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-cardiff05/anat/{sub-cardiff05_space-other_T2w_labels-disc-manual.nii.gz => sub-cardiff05_space-other_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-cardiff05/dwi/{sub-cardiff05_rec-average_dwi_seg-manual.json => sub-cardiff05_rec-average_dwi_label-SC_seg.json} (100%) rename derivatives/labels/sub-cardiff05/dwi/{sub-cardiff05_rec-average_dwi_seg-manual.nii.gz => sub-cardiff05_rec-average_dwi_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-cardiff06/anat/{sub-cardiff06_flip-1_mt-on_space-other_MTS_seg-manual.json => sub-cardiff06_flip-1_mt-on_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-cardiff06/anat/{sub-cardiff06_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz => sub-cardiff06_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-cardiff06/anat/{sub-cardiff06_flip-2_mt-off_space-other_MTS_seg-manual.json => sub-cardiff06_flip-2_mt-off_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-cardiff06/anat/{sub-cardiff06_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz => sub-cardiff06_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-cardiff06/anat/{sub-cardiff06_space-other_T1w_seg-manual.json => sub-cardiff06_space-other_T1w_label-SC_seg.json} (100%) rename derivatives/labels/sub-cardiff06/anat/{sub-cardiff06_space-other_T1w_seg-manual.nii.gz => sub-cardiff06_space-other_T1w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-cardiff06/anat/{sub-cardiff06_space-other_T1w_labels-disc-manual.json => sub-cardiff06_space-other_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-cardiff06/anat/{sub-cardiff06_space-other_T1w_labels-disc-manual.nii.gz => sub-cardiff06_space-other_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-cardiff06/anat/{sub-cardiff06_space-other_T2star_seg-manual.json => sub-cardiff06_space-other_T2star_label-SC_seg.json} (100%) rename derivatives/labels/sub-cardiff06/anat/{sub-cardiff06_space-other_T2star_seg-manual.nii.gz => sub-cardiff06_space-other_T2star_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-cardiff06/anat/{sub-cardiff06_space-other_T2w_seg-manual.json => sub-cardiff06_space-other_T2w_label-SC_seg.json} (100%) rename derivatives/labels/sub-cardiff06/anat/{sub-cardiff06_space-other_T2w_seg-manual.nii.gz => sub-cardiff06_space-other_T2w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-cardiff06/anat/{sub-cardiff06_space-other_T2w_labels-disc-manual.json => sub-cardiff06_space-other_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-cardiff06/anat/{sub-cardiff06_space-other_T2w_labels-disc-manual.nii.gz => sub-cardiff06_space-other_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-cardiff06/dwi/{sub-cardiff06_rec-average_dwi_seg-manual.json => sub-cardiff06_rec-average_dwi_label-SC_seg.json} (100%) rename derivatives/labels/sub-cardiff06/dwi/{sub-cardiff06_rec-average_dwi_seg-manual.nii.gz => sub-cardiff06_rec-average_dwi_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-cmrra01/anat/{sub-cmrra01_flip-1_mt-on_space-other_MTS_seg-manual.json => sub-cmrra01_flip-1_mt-on_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-cmrra01/anat/{sub-cmrra01_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz => sub-cmrra01_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-cmrra01/anat/{sub-cmrra01_flip-2_mt-off_space-other_MTS_seg-manual.json => sub-cmrra01_flip-2_mt-off_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-cmrra01/anat/{sub-cmrra01_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz => sub-cmrra01_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-cmrra01/anat/{sub-cmrra01_space-other_T1w_seg-manual.json => sub-cmrra01_space-other_T1w_label-SC_seg.json} (100%) rename derivatives/labels/sub-cmrra01/anat/{sub-cmrra01_space-other_T1w_seg-manual.nii.gz => sub-cmrra01_space-other_T1w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-cmrra01/anat/{sub-cmrra01_space-other_T1w_labels-disc-manual.json => sub-cmrra01_space-other_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-cmrra01/anat/{sub-cmrra01_space-other_T1w_labels-disc-manual.nii.gz => sub-cmrra01_space-other_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-cmrra01/anat/{sub-cmrra01_space-other_T2star_seg-manual.json => sub-cmrra01_space-other_T2star_label-SC_seg.json} (100%) rename derivatives/labels/sub-cmrra01/anat/{sub-cmrra01_space-other_T2star_seg-manual.nii.gz => sub-cmrra01_space-other_T2star_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-cmrra01/anat/{sub-cmrra01_space-other_T2w_seg-manual.json => sub-cmrra01_space-other_T2w_label-SC_seg.json} (100%) rename derivatives/labels/sub-cmrra01/anat/{sub-cmrra01_space-other_T2w_seg-manual.nii.gz => sub-cmrra01_space-other_T2w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-cmrra01/anat/{sub-cmrra01_space-other_T2w_labels-disc-manual.json => sub-cmrra01_space-other_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-cmrra01/anat/{sub-cmrra01_space-other_T2w_labels-disc-manual.nii.gz => sub-cmrra01_space-other_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-cmrra01/dwi/{sub-cmrra01_rec-average_dwi_seg-manual.json => sub-cmrra01_rec-average_dwi_label-SC_seg.json} (100%) rename derivatives/labels/sub-cmrra01/dwi/{sub-cmrra01_rec-average_dwi_seg-manual.nii.gz => sub-cmrra01_rec-average_dwi_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-cmrra02/anat/{sub-cmrra02_flip-1_mt-on_space-other_MTS_seg-manual.json => sub-cmrra02_flip-1_mt-on_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-cmrra02/anat/{sub-cmrra02_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz => sub-cmrra02_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-cmrra02/anat/{sub-cmrra02_flip-2_mt-off_space-other_MTS_seg-manual.json => sub-cmrra02_flip-2_mt-off_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-cmrra02/anat/{sub-cmrra02_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz => sub-cmrra02_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-cmrra02/anat/{sub-cmrra02_space-other_T1w_seg-manual.json => sub-cmrra02_space-other_T1w_label-SC_seg.json} (100%) rename derivatives/labels/sub-cmrra02/anat/{sub-cmrra02_space-other_T1w_seg-manual.nii.gz => sub-cmrra02_space-other_T1w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-cmrra02/anat/{sub-cmrra02_space-other_T1w_labels-disc-manual.json => sub-cmrra02_space-other_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-cmrra02/anat/{sub-cmrra02_space-other_T1w_labels-disc-manual.nii.gz => sub-cmrra02_space-other_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-cmrra02/anat/{sub-cmrra02_space-other_T2star_seg-manual.json => sub-cmrra02_space-other_T2star_label-SC_seg.json} (100%) rename derivatives/labels/sub-cmrra02/anat/{sub-cmrra02_space-other_T2star_seg-manual.nii.gz => sub-cmrra02_space-other_T2star_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-cmrra02/anat/{sub-cmrra02_space-other_T2w_seg-manual.json => sub-cmrra02_space-other_T2w_label-SC_seg.json} (100%) rename derivatives/labels/sub-cmrra02/anat/{sub-cmrra02_space-other_T2w_seg-manual.nii.gz => sub-cmrra02_space-other_T2w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-cmrra02/anat/{sub-cmrra02_space-other_T2w_labels-disc-manual.json => sub-cmrra02_space-other_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-cmrra02/anat/{sub-cmrra02_space-other_T2w_labels-disc-manual.nii.gz => sub-cmrra02_space-other_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-cmrra02/dwi/{sub-cmrra02_rec-average_dwi_seg-manual.json => sub-cmrra02_rec-average_dwi_label-SC_seg.json} (100%) rename derivatives/labels/sub-cmrra02/dwi/{sub-cmrra02_rec-average_dwi_seg-manual.nii.gz => sub-cmrra02_rec-average_dwi_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-cmrra03/anat/{sub-cmrra03_flip-1_mt-on_space-other_MTS_seg-manual.json => sub-cmrra03_flip-1_mt-on_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-cmrra03/anat/{sub-cmrra03_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz => sub-cmrra03_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-cmrra03/anat/{sub-cmrra03_flip-2_mt-off_space-other_MTS_seg-manual.json => sub-cmrra03_flip-2_mt-off_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-cmrra03/anat/{sub-cmrra03_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz => sub-cmrra03_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-cmrra03/anat/{sub-cmrra03_space-other_T1w_seg-manual.json => sub-cmrra03_space-other_T1w_label-SC_seg.json} (100%) rename derivatives/labels/sub-cmrra03/anat/{sub-cmrra03_space-other_T1w_seg-manual.nii.gz => sub-cmrra03_space-other_T1w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-cmrra03/anat/{sub-cmrra03_space-other_T1w_labels-disc-manual.json => sub-cmrra03_space-other_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-cmrra03/anat/{sub-cmrra03_space-other_T1w_labels-disc-manual.nii.gz => sub-cmrra03_space-other_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-cmrra03/anat/{sub-cmrra03_space-other_T2star_seg-manual.json => sub-cmrra03_space-other_T2star_label-SC_seg.json} (100%) rename derivatives/labels/sub-cmrra03/anat/{sub-cmrra03_space-other_T2star_seg-manual.nii.gz => sub-cmrra03_space-other_T2star_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-cmrra03/anat/{sub-cmrra03_space-other_T2w_seg-manual.json => sub-cmrra03_space-other_T2w_label-SC_seg.json} (100%) rename derivatives/labels/sub-cmrra03/anat/{sub-cmrra03_space-other_T2w_seg-manual.nii.gz => sub-cmrra03_space-other_T2w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-cmrra03/anat/{sub-cmrra03_space-other_T2w_labels-disc-manual.json => sub-cmrra03_space-other_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-cmrra03/anat/{sub-cmrra03_space-other_T2w_labels-disc-manual.nii.gz => sub-cmrra03_space-other_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-cmrra03/dwi/{sub-cmrra03_rec-average_dwi_seg-manual.json => sub-cmrra03_rec-average_dwi_label-SC_seg.json} (100%) rename derivatives/labels/sub-cmrra03/dwi/{sub-cmrra03_rec-average_dwi_seg-manual.nii.gz => sub-cmrra03_rec-average_dwi_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-cmrra04/anat/{sub-cmrra04_flip-1_mt-on_space-other_MTS_seg-manual.json => sub-cmrra04_flip-1_mt-on_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-cmrra04/anat/{sub-cmrra04_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz => sub-cmrra04_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-cmrra04/anat/{sub-cmrra04_flip-2_mt-off_space-other_MTS_seg-manual.json => sub-cmrra04_flip-2_mt-off_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-cmrra04/anat/{sub-cmrra04_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz => sub-cmrra04_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-cmrra04/anat/{sub-cmrra04_space-other_T1w_seg-manual.json => sub-cmrra04_space-other_T1w_label-SC_seg.json} (100%) rename derivatives/labels/sub-cmrra04/anat/{sub-cmrra04_space-other_T1w_seg-manual.nii.gz => sub-cmrra04_space-other_T1w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-cmrra04/anat/{sub-cmrra04_space-other_T1w_labels-disc-manual.json => sub-cmrra04_space-other_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-cmrra04/anat/{sub-cmrra04_space-other_T1w_labels-disc-manual.nii.gz => sub-cmrra04_space-other_T1w_label-discs_dlabel.nii.gz} (100%) rename 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rename derivatives/labels/sub-dresden01/anat/{sub-dresden01_space-other_T2star_seg-manual.json => sub-dresden01_space-other_T2star_label-SC_seg.json} (100%) rename derivatives/labels/sub-dresden01/anat/{sub-dresden01_space-other_T2star_seg-manual.nii.gz => sub-dresden01_space-other_T2star_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-dresden01/anat/{sub-dresden01_space-other_T2w_seg-manual.json => sub-dresden01_space-other_T2w_label-SC_seg.json} (100%) rename derivatives/labels/sub-dresden01/anat/{sub-dresden01_space-other_T2w_seg-manual.nii.gz => sub-dresden01_space-other_T2w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-dresden01/anat/{sub-dresden01_space-other_T2w_labels-disc-manual.json => sub-dresden01_space-other_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-dresden01/anat/{sub-dresden01_space-other_T2w_labels-disc-manual.nii.gz => sub-dresden01_space-other_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-dresden01/dwi/{sub-dresden01_rec-average_dwi_seg-manual.json => sub-dresden01_rec-average_dwi_label-SC_seg.json} (100%) rename derivatives/labels/sub-dresden01/dwi/{sub-dresden01_rec-average_dwi_seg-manual.nii.gz => sub-dresden01_rec-average_dwi_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-dresden02/anat/{sub-dresden02_flip-1_mt-on_space-other_MTS_seg-manual.json => sub-dresden02_flip-1_mt-on_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-dresden02/anat/{sub-dresden02_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz => sub-dresden02_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-dresden02/anat/{sub-dresden02_flip-2_mt-off_space-other_MTS_seg-manual.json => sub-dresden02_flip-2_mt-off_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-dresden02/anat/{sub-dresden02_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz => sub-dresden02_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-dresden02/anat/{sub-dresden02_space-other_T1w_seg-manual.json => sub-dresden02_space-other_T1w_label-SC_seg.json} (100%) rename derivatives/labels/sub-dresden02/anat/{sub-dresden02_space-other_T1w_seg-manual.nii.gz => sub-dresden02_space-other_T1w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-dresden02/anat/{sub-dresden02_space-other_T1w_labels-disc-manual.json => sub-dresden02_space-other_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-dresden02/anat/{sub-dresden02_space-other_T1w_labels-disc-manual.nii.gz => sub-dresden02_space-other_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-dresden02/anat/{sub-dresden02_space-other_T2star_seg-manual.json => sub-dresden02_space-other_T2star_label-SC_seg.json} (100%) rename derivatives/labels/sub-dresden02/anat/{sub-dresden02_space-other_T2star_seg-manual.nii.gz => 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(100%) rename derivatives/labels/sub-fslAchieva01/anat/{sub-fslAchieva01_flip-1_mt-on_space-other_MTS_seg-manual.json => sub-fslAchieva01_flip-1_mt-on_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-fslAchieva01/anat/{sub-fslAchieva01_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz => sub-fslAchieva01_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-fslAchieva01/anat/{sub-fslAchieva01_flip-2_mt-off_space-other_MTS_seg-manual.json => sub-fslAchieva01_flip-2_mt-off_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-fslAchieva01/anat/{sub-fslAchieva01_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz => sub-fslAchieva01_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-fslAchieva01/anat/{sub-fslAchieva01_space-other_T1w_seg-manual.json => sub-fslAchieva01_space-other_T1w_label-SC_seg.json} (100%) rename derivatives/labels/sub-fslAchieva01/anat/{sub-fslAchieva01_space-other_T1w_seg-manual.nii.gz => sub-fslAchieva01_space-other_T1w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-fslAchieva01/anat/{sub-fslAchieva01_space-other_T1w_labels-disc-manual.json => sub-fslAchieva01_space-other_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-fslAchieva01/anat/{sub-fslAchieva01_space-other_T1w_labels-disc-manual.nii.gz => sub-fslAchieva01_space-other_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-fslAchieva01/anat/{sub-fslAchieva01_space-other_T2star_gmseg-manual.json => sub-fslAchieva01_space-other_T2star_gmlabel-SC_seg.json} (100%) rename derivatives/labels/sub-fslAchieva01/anat/{sub-fslAchieva01_space-other_T2star_gmseg-manual.nii.gz => sub-fslAchieva01_space-other_T2star_gmlabel-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-fslAchieva01/anat/{sub-fslAchieva01_space-other_T2star_seg-manual.json => sub-fslAchieva01_space-other_T2star_label-SC_seg.json} (100%) rename derivatives/labels/sub-fslAchieva01/anat/{sub-fslAchieva01_space-other_T2star_seg-manual.nii.gz => sub-fslAchieva01_space-other_T2star_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-fslAchieva01/anat/{sub-fslAchieva01_space-other_T2w_seg-manual.json => sub-fslAchieva01_space-other_T2w_label-SC_seg.json} (100%) rename derivatives/labels/sub-fslAchieva01/anat/{sub-fslAchieva01_space-other_T2w_seg-manual.nii.gz => sub-fslAchieva01_space-other_T2w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-fslAchieva01/anat/{sub-fslAchieva01_space-other_T2w_labels-disc-manual.json => sub-fslAchieva01_space-other_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-fslAchieva01/anat/{sub-fslAchieva01_space-other_T2w_labels-disc-manual.nii.gz => sub-fslAchieva01_space-other_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-fslAchieva01/dwi/{sub-fslAchieva01_rec-average_dwi_seg-manual.json => sub-fslAchieva01_rec-average_dwi_label-SC_seg.json} (100%) rename derivatives/labels/sub-fslAchieva01/dwi/{sub-fslAchieva01_rec-average_dwi_seg-manual.nii.gz => sub-fslAchieva01_rec-average_dwi_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-fslAchieva02/anat/{sub-fslAchieva02_flip-1_mt-on_space-other_MTS_seg-manual.json => sub-fslAchieva02_flip-1_mt-on_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-fslAchieva02/anat/{sub-fslAchieva02_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz => sub-fslAchieva02_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-fslAchieva02/anat/{sub-fslAchieva02_flip-2_mt-off_space-other_MTS_seg-manual.json => sub-fslAchieva02_flip-2_mt-off_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-fslAchieva02/anat/{sub-fslAchieva02_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz => sub-fslAchieva02_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-fslAchieva02/anat/{sub-fslAchieva02_space-other_T1w_seg-manual.json => sub-fslAchieva02_space-other_T1w_label-SC_seg.json} (100%) rename derivatives/labels/sub-fslAchieva02/anat/{sub-fslAchieva02_space-other_T1w_seg-manual.nii.gz => sub-fslAchieva02_space-other_T1w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-fslAchieva02/anat/{sub-fslAchieva02_space-other_T1w_labels-disc-manual.json => sub-fslAchieva02_space-other_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-fslAchieva02/anat/{sub-fslAchieva02_space-other_T1w_labels-disc-manual.nii.gz => sub-fslAchieva02_space-other_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-fslAchieva02/anat/{sub-fslAchieva02_space-other_T2star_seg-manual.json => sub-fslAchieva02_space-other_T2star_label-SC_seg.json} (100%) rename derivatives/labels/sub-fslAchieva02/anat/{sub-fslAchieva02_space-other_T2star_seg-manual.nii.gz => sub-fslAchieva02_space-other_T2star_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-fslAchieva02/anat/{sub-fslAchieva02_space-other_T2w_seg-manual.json => sub-fslAchieva02_space-other_T2w_label-SC_seg.json} (100%) rename derivatives/labels/sub-fslAchieva02/anat/{sub-fslAchieva02_space-other_T2w_seg-manual.nii.gz => sub-fslAchieva02_space-other_T2w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-fslAchieva02/anat/{sub-fslAchieva02_space-other_T2w_labels-disc-manual.json => sub-fslAchieva02_space-other_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-fslAchieva02/anat/{sub-fslAchieva02_space-other_T2w_labels-disc-manual.nii.gz => sub-fslAchieva02_space-other_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-fslAchieva02/dwi/{sub-fslAchieva02_rec-average_dwi_seg-manual.json => sub-fslAchieva02_rec-average_dwi_label-SC_seg.json} (100%) rename derivatives/labels/sub-fslAchieva02/dwi/{sub-fslAchieva02_rec-average_dwi_seg-manual.nii.gz => sub-fslAchieva02_rec-average_dwi_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-fslAchieva03/anat/{sub-fslAchieva03_flip-1_mt-on_space-other_MTS_seg-manual.json => sub-fslAchieva03_flip-1_mt-on_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-fslAchieva03/anat/{sub-fslAchieva03_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz => sub-fslAchieva03_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-fslAchieva03/anat/{sub-fslAchieva03_flip-2_mt-off_space-other_MTS_seg-manual.json => sub-fslAchieva03_flip-2_mt-off_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-fslAchieva03/anat/{sub-fslAchieva03_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz => sub-fslAchieva03_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-fslAchieva03/anat/{sub-fslAchieva03_space-other_T1w_seg-manual.json => sub-fslAchieva03_space-other_T1w_label-SC_seg.json} (100%) rename derivatives/labels/sub-fslAchieva03/anat/{sub-fslAchieva03_space-other_T1w_seg-manual.nii.gz => sub-fslAchieva03_space-other_T1w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-fslAchieva03/anat/{sub-fslAchieva03_space-other_T1w_labels-disc-manual.json => sub-fslAchieva03_space-other_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-fslAchieva03/anat/{sub-fslAchieva03_space-other_T1w_labels-disc-manual.nii.gz => sub-fslAchieva03_space-other_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-fslAchieva03/anat/{sub-fslAchieva03_space-other_T2star_seg-manual.json => sub-fslAchieva03_space-other_T2star_label-SC_seg.json} (100%) rename derivatives/labels/sub-fslAchieva03/anat/{sub-fslAchieva03_space-other_T2star_seg-manual.nii.gz => sub-fslAchieva03_space-other_T2star_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-fslAchieva03/anat/{sub-fslAchieva03_space-other_T2w_seg-manual.json => sub-fslAchieva03_space-other_T2w_label-SC_seg.json} (100%) rename derivatives/labels/sub-fslAchieva03/anat/{sub-fslAchieva03_space-other_T2w_seg-manual.nii.gz => sub-fslAchieva03_space-other_T2w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-fslAchieva03/anat/{sub-fslAchieva03_space-other_T2w_labels-disc-manual.json => sub-fslAchieva03_space-other_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-fslAchieva03/anat/{sub-fslAchieva03_space-other_T2w_labels-disc-manual.nii.gz => sub-fslAchieva03_space-other_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-fslAchieva03/dwi/{sub-fslAchieva03_rec-average_dwi_seg-manual.json => sub-fslAchieva03_rec-average_dwi_label-SC_seg.json} (100%) rename derivatives/labels/sub-fslAchieva03/dwi/{sub-fslAchieva03_rec-average_dwi_seg-manual.nii.gz => sub-fslAchieva03_rec-average_dwi_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-fslAchieva04/anat/{sub-fslAchieva04_flip-1_mt-on_space-other_MTS_seg-manual.json => sub-fslAchieva04_flip-1_mt-on_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-fslAchieva04/anat/{sub-fslAchieva04_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz => sub-fslAchieva04_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-fslAchieva04/anat/{sub-fslAchieva04_flip-2_mt-off_space-other_MTS_seg-manual.json => sub-fslAchieva04_flip-2_mt-off_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-fslAchieva04/anat/{sub-fslAchieva04_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz => sub-fslAchieva04_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-fslAchieva04/anat/{sub-fslAchieva04_space-other_T1w_seg-manual.json => sub-fslAchieva04_space-other_T1w_label-SC_seg.json} (100%) rename derivatives/labels/sub-fslAchieva04/anat/{sub-fslAchieva04_space-other_T1w_seg-manual.nii.gz => sub-fslAchieva04_space-other_T1w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-fslAchieva04/anat/{sub-fslAchieva04_space-other_T1w_labels-disc-manual.json => sub-fslAchieva04_space-other_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-fslAchieva04/anat/{sub-fslAchieva04_space-other_T1w_labels-disc-manual.nii.gz => sub-fslAchieva04_space-other_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-fslAchieva04/anat/{sub-fslAchieva04_space-other_T2star_gmseg-manual.json => sub-fslAchieva04_space-other_T2star_gmlabel-SC_seg.json} (100%) rename derivatives/labels/sub-fslAchieva04/anat/{sub-fslAchieva04_space-other_T2star_gmseg-manual.nii.gz => sub-fslAchieva04_space-other_T2star_gmlabel-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-fslAchieva04/anat/{sub-fslAchieva04_space-other_T2star_seg-manual.json => sub-fslAchieva04_space-other_T2star_label-SC_seg.json} (100%) rename derivatives/labels/sub-fslAchieva04/anat/{sub-fslAchieva04_space-other_T2star_seg-manual.nii.gz => sub-fslAchieva04_space-other_T2star_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-fslAchieva04/anat/{sub-fslAchieva04_space-other_T2w_seg-manual.json => sub-fslAchieva04_space-other_T2w_label-SC_seg.json} (100%) rename derivatives/labels/sub-fslAchieva04/anat/{sub-fslAchieva04_space-other_T2w_seg-manual.nii.gz => sub-fslAchieva04_space-other_T2w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-fslAchieva04/anat/{sub-fslAchieva04_space-other_T2w_labels-disc-manual.json => sub-fslAchieva04_space-other_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-fslAchieva04/anat/{sub-fslAchieva04_space-other_T2w_labels-disc-manual.nii.gz => sub-fslAchieva04_space-other_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-fslAchieva04/dwi/{sub-fslAchieva04_rec-average_dwi_seg-manual.json => sub-fslAchieva04_rec-average_dwi_label-SC_seg.json} (100%) rename derivatives/labels/sub-fslAchieva04/dwi/{sub-fslAchieva04_rec-average_dwi_seg-manual.nii.gz => sub-fslAchieva04_rec-average_dwi_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-fslAchieva05/anat/{sub-fslAchieva05_flip-1_mt-on_space-other_MTS_seg-manual.json => sub-fslAchieva05_flip-1_mt-on_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-fslAchieva05/anat/{sub-fslAchieva05_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz => sub-fslAchieva05_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-fslAchieva05/anat/{sub-fslAchieva05_flip-2_mt-off_space-other_MTS_seg-manual.json => sub-fslAchieva05_flip-2_mt-off_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-fslAchieva05/anat/{sub-fslAchieva05_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz => sub-fslAchieva05_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-fslAchieva05/anat/{sub-fslAchieva05_space-other_T1w_seg-manual.json => sub-fslAchieva05_space-other_T1w_label-SC_seg.json} (100%) rename derivatives/labels/sub-fslAchieva05/anat/{sub-fslAchieva05_space-other_T1w_seg-manual.nii.gz => sub-fslAchieva05_space-other_T1w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-fslAchieva05/anat/{sub-fslAchieva05_space-other_T1w_labels-disc-manual.json => sub-fslAchieva05_space-other_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-fslAchieva05/anat/{sub-fslAchieva05_space-other_T1w_labels-disc-manual.nii.gz => sub-fslAchieva05_space-other_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-fslAchieva05/anat/{sub-fslAchieva05_space-other_T2star_seg-manual.json => sub-fslAchieva05_space-other_T2star_label-SC_seg.json} (100%) rename derivatives/labels/sub-fslAchieva05/anat/{sub-fslAchieva05_space-other_T2star_seg-manual.nii.gz => sub-fslAchieva05_space-other_T2star_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-fslAchieva05/anat/{sub-fslAchieva05_space-other_T2w_seg-manual.json => sub-fslAchieva05_space-other_T2w_label-SC_seg.json} (100%) rename derivatives/labels/sub-fslAchieva05/anat/{sub-fslAchieva05_space-other_T2w_seg-manual.nii.gz => sub-fslAchieva05_space-other_T2w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-fslAchieva05/anat/{sub-fslAchieva05_space-other_T2w_labels-disc-manual.json => sub-fslAchieva05_space-other_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-fslAchieva05/anat/{sub-fslAchieva05_space-other_T2w_labels-disc-manual.nii.gz => sub-fslAchieva05_space-other_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-fslAchieva05/dwi/{sub-fslAchieva05_rec-average_dwi_seg-manual.json => sub-fslAchieva05_rec-average_dwi_label-SC_seg.json} (100%) rename derivatives/labels/sub-fslAchieva05/dwi/{sub-fslAchieva05_rec-average_dwi_seg-manual.nii.gz => sub-fslAchieva05_rec-average_dwi_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-fslAchieva06/anat/{sub-fslAchieva06_flip-1_mt-on_space-other_MTS_seg-manual.json => sub-fslAchieva06_flip-1_mt-on_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-fslAchieva06/anat/{sub-fslAchieva06_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz => sub-fslAchieva06_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-fslAchieva06/anat/{sub-fslAchieva06_flip-2_mt-off_space-other_MTS_seg-manual.json => sub-fslAchieva06_flip-2_mt-off_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-fslAchieva06/anat/{sub-fslAchieva06_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz => sub-fslAchieva06_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-fslAchieva06/anat/{sub-fslAchieva06_space-other_T1w_seg-manual.json => sub-fslAchieva06_space-other_T1w_label-SC_seg.json} (100%) rename derivatives/labels/sub-fslAchieva06/anat/{sub-fslAchieva06_space-other_T1w_seg-manual.nii.gz => sub-fslAchieva06_space-other_T1w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-fslAchieva06/anat/{sub-fslAchieva06_space-other_T1w_labels-disc-manual.json => sub-fslAchieva06_space-other_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-fslAchieva06/anat/{sub-fslAchieva06_space-other_T1w_labels-disc-manual.nii.gz => sub-fslAchieva06_space-other_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-fslAchieva06/anat/{sub-fslAchieva06_space-other_T2star_seg-manual.json => sub-fslAchieva06_space-other_T2star_label-SC_seg.json} (100%) rename derivatives/labels/sub-fslAchieva06/anat/{sub-fslAchieva06_space-other_T2star_seg-manual.nii.gz => sub-fslAchieva06_space-other_T2star_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-fslAchieva06/anat/{sub-fslAchieva06_space-other_T2w_seg-manual.json => sub-fslAchieva06_space-other_T2w_label-SC_seg.json} (100%) rename derivatives/labels/sub-fslAchieva06/anat/{sub-fslAchieva06_space-other_T2w_seg-manual.nii.gz => sub-fslAchieva06_space-other_T2w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-fslAchieva06/anat/{sub-fslAchieva06_space-other_T2w_labels-disc-manual.json => sub-fslAchieva06_space-other_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-fslAchieva06/anat/{sub-fslAchieva06_space-other_T2w_labels-disc-manual.nii.gz => sub-fslAchieva06_space-other_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-fslAchieva06/dwi/{sub-fslAchieva06_rec-average_dwi_seg-manual.json => sub-fslAchieva06_rec-average_dwi_label-SC_seg.json} (100%) rename derivatives/labels/sub-fslAchieva06/dwi/{sub-fslAchieva06_rec-average_dwi_seg-manual.nii.gz => sub-fslAchieva06_rec-average_dwi_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-fslPrisma01/anat/{sub-fslPrisma01_flip-1_mt-on_space-other_MTS_seg-manual.json => sub-fslPrisma01_flip-1_mt-on_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-fslPrisma01/anat/{sub-fslPrisma01_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz => sub-fslPrisma01_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-fslPrisma01/anat/{sub-fslPrisma01_flip-2_mt-off_space-other_MTS_seg-manual.json => sub-fslPrisma01_flip-2_mt-off_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-fslPrisma01/anat/{sub-fslPrisma01_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz => sub-fslPrisma01_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-fslPrisma01/anat/{sub-fslPrisma01_space-other_T1w_seg-manual.json => sub-fslPrisma01_space-other_T1w_label-SC_seg.json} (100%) rename derivatives/labels/sub-fslPrisma01/anat/{sub-fslPrisma01_space-other_T1w_seg-manual.nii.gz => sub-fslPrisma01_space-other_T1w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-fslPrisma01/anat/{sub-fslPrisma01_space-other_T1w_labels-disc-manual.json => sub-fslPrisma01_space-other_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-fslPrisma01/anat/{sub-fslPrisma01_space-other_T1w_labels-disc-manual.nii.gz => sub-fslPrisma01_space-other_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-fslPrisma01/anat/{sub-fslPrisma01_space-other_T2star_seg-manual.json => sub-fslPrisma01_space-other_T2star_label-SC_seg.json} (100%) rename derivatives/labels/sub-fslPrisma01/anat/{sub-fslPrisma01_space-other_T2star_seg-manual.nii.gz => sub-fslPrisma01_space-other_T2star_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-fslPrisma01/anat/{sub-fslPrisma01_space-other_T2w_seg-manual.json => sub-fslPrisma01_space-other_T2w_label-SC_seg.json} (100%) rename derivatives/labels/sub-fslPrisma01/anat/{sub-fslPrisma01_space-other_T2w_seg-manual.nii.gz => sub-fslPrisma01_space-other_T2w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-fslPrisma01/anat/{sub-fslPrisma01_space-other_T2w_labels-disc-manual.json => sub-fslPrisma01_space-other_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-fslPrisma01/anat/{sub-fslPrisma01_space-other_T2w_labels-disc-manual.nii.gz => sub-fslPrisma01_space-other_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-fslPrisma01/dwi/{sub-fslPrisma01_rec-average_dwi_seg-manual.json => sub-fslPrisma01_rec-average_dwi_label-SC_seg.json} (100%) rename derivatives/labels/sub-fslPrisma01/dwi/{sub-fslPrisma01_rec-average_dwi_seg-manual.nii.gz => sub-fslPrisma01_rec-average_dwi_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-fslPrisma02/anat/{sub-fslPrisma02_flip-1_mt-on_space-other_MTS_seg-manual.json => sub-fslPrisma02_flip-1_mt-on_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-fslPrisma02/anat/{sub-fslPrisma02_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz => sub-fslPrisma02_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-fslPrisma02/anat/{sub-fslPrisma02_flip-2_mt-off_space-other_MTS_seg-manual.json => sub-fslPrisma02_flip-2_mt-off_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-fslPrisma02/anat/{sub-fslPrisma02_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz => sub-fslPrisma02_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-fslPrisma02/anat/{sub-fslPrisma02_space-other_T1w_seg-manual.json => sub-fslPrisma02_space-other_T1w_label-SC_seg.json} (100%) rename derivatives/labels/sub-fslPrisma02/anat/{sub-fslPrisma02_space-other_T1w_seg-manual.nii.gz => sub-fslPrisma02_space-other_T1w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-fslPrisma02/anat/{sub-fslPrisma02_space-other_T1w_labels-disc-manual.json => sub-fslPrisma02_space-other_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-fslPrisma02/anat/{sub-fslPrisma02_space-other_T1w_labels-disc-manual.nii.gz => sub-fslPrisma02_space-other_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-fslPrisma02/anat/{sub-fslPrisma02_space-other_T2star_seg-manual.json => sub-fslPrisma02_space-other_T2star_label-SC_seg.json} (100%) rename derivatives/labels/sub-fslPrisma02/anat/{sub-fslPrisma02_space-other_T2star_seg-manual.nii.gz => sub-fslPrisma02_space-other_T2star_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-fslPrisma02/anat/{sub-fslPrisma02_space-other_T2w_seg-manual.json => sub-fslPrisma02_space-other_T2w_label-SC_seg.json} (100%) rename derivatives/labels/sub-fslPrisma02/anat/{sub-fslPrisma02_space-other_T2w_seg-manual.nii.gz => sub-fslPrisma02_space-other_T2w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-fslPrisma02/anat/{sub-fslPrisma02_space-other_T2w_labels-disc-manual.json => sub-fslPrisma02_space-other_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-fslPrisma02/anat/{sub-fslPrisma02_space-other_T2w_labels-disc-manual.nii.gz => sub-fslPrisma02_space-other_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-fslPrisma02/dwi/{sub-fslPrisma02_rec-average_dwi_seg-manual.json => sub-fslPrisma02_rec-average_dwi_label-SC_seg.json} (100%) rename derivatives/labels/sub-fslPrisma02/dwi/{sub-fslPrisma02_rec-average_dwi_seg-manual.nii.gz => sub-fslPrisma02_rec-average_dwi_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-fslPrisma03/anat/{sub-fslPrisma03_flip-1_mt-on_space-other_MTS_seg-manual.json => sub-fslPrisma03_flip-1_mt-on_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-fslPrisma03/anat/{sub-fslPrisma03_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz => sub-fslPrisma03_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-fslPrisma03/anat/{sub-fslPrisma03_flip-2_mt-off_space-other_MTS_seg-manual.json => sub-fslPrisma03_flip-2_mt-off_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-fslPrisma03/anat/{sub-fslPrisma03_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz => sub-fslPrisma03_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-fslPrisma03/anat/{sub-fslPrisma03_space-other_T1w_seg-manual.json => sub-fslPrisma03_space-other_T1w_label-SC_seg.json} (100%) rename derivatives/labels/sub-fslPrisma03/anat/{sub-fslPrisma03_space-other_T1w_seg-manual.nii.gz => sub-fslPrisma03_space-other_T1w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-fslPrisma03/anat/{sub-fslPrisma03_space-other_T1w_labels-disc-manual.json => sub-fslPrisma03_space-other_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-fslPrisma03/anat/{sub-fslPrisma03_space-other_T1w_labels-disc-manual.nii.gz => sub-fslPrisma03_space-other_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-fslPrisma03/anat/{sub-fslPrisma03_space-other_T2star_seg-manual.json => sub-fslPrisma03_space-other_T2star_label-SC_seg.json} (100%) rename derivatives/labels/sub-fslPrisma03/anat/{sub-fslPrisma03_space-other_T2star_seg-manual.nii.gz => sub-fslPrisma03_space-other_T2star_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-fslPrisma03/anat/{sub-fslPrisma03_space-other_T2w_seg-manual.json => sub-fslPrisma03_space-other_T2w_label-SC_seg.json} (100%) rename derivatives/labels/sub-fslPrisma03/anat/{sub-fslPrisma03_space-other_T2w_seg-manual.nii.gz => sub-fslPrisma03_space-other_T2w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-fslPrisma03/anat/{sub-fslPrisma03_space-other_T2w_labels-disc-manual.json => sub-fslPrisma03_space-other_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-fslPrisma03/anat/{sub-fslPrisma03_space-other_T2w_labels-disc-manual.nii.gz => sub-fslPrisma03_space-other_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-fslPrisma03/dwi/{sub-fslPrisma03_rec-average_dwi_seg-manual.json => sub-fslPrisma03_rec-average_dwi_label-SC_seg.json} (100%) rename derivatives/labels/sub-fslPrisma03/dwi/{sub-fslPrisma03_rec-average_dwi_seg-manual.nii.gz => sub-fslPrisma03_rec-average_dwi_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-fslPrisma04/anat/{sub-fslPrisma04_flip-1_mt-on_space-other_MTS_seg-manual.json => sub-fslPrisma04_flip-1_mt-on_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-fslPrisma04/anat/{sub-fslPrisma04_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz => sub-fslPrisma04_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-fslPrisma04/anat/{sub-fslPrisma04_flip-2_mt-off_space-other_MTS_seg-manual.json => sub-fslPrisma04_flip-2_mt-off_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-fslPrisma04/anat/{sub-fslPrisma04_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz => sub-fslPrisma04_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-fslPrisma04/anat/{sub-fslPrisma04_space-other_T1w_seg-manual.json => sub-fslPrisma04_space-other_T1w_label-SC_seg.json} (100%) rename derivatives/labels/sub-fslPrisma04/anat/{sub-fslPrisma04_space-other_T1w_seg-manual.nii.gz => sub-fslPrisma04_space-other_T1w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-fslPrisma04/anat/{sub-fslPrisma04_space-other_T1w_labels-disc-manual.json => sub-fslPrisma04_space-other_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-fslPrisma04/anat/{sub-fslPrisma04_space-other_T1w_labels-disc-manual.nii.gz => sub-fslPrisma04_space-other_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-fslPrisma04/anat/{sub-fslPrisma04_space-other_T2star_seg-manual.json => sub-fslPrisma04_space-other_T2star_label-SC_seg.json} (100%) rename derivatives/labels/sub-fslPrisma04/anat/{sub-fslPrisma04_space-other_T2star_seg-manual.nii.gz => sub-fslPrisma04_space-other_T2star_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-fslPrisma04/anat/{sub-fslPrisma04_space-other_T2w_seg-manual.json => sub-fslPrisma04_space-other_T2w_label-SC_seg.json} (100%) rename derivatives/labels/sub-fslPrisma04/anat/{sub-fslPrisma04_space-other_T2w_seg-manual.nii.gz => sub-fslPrisma04_space-other_T2w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-fslPrisma04/anat/{sub-fslPrisma04_space-other_T2w_labels-disc-manual.json => sub-fslPrisma04_space-other_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-fslPrisma04/anat/{sub-fslPrisma04_space-other_T2w_labels-disc-manual.nii.gz => sub-fslPrisma04_space-other_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-fslPrisma04/dwi/{sub-fslPrisma04_rec-average_dwi_seg-manual.json => sub-fslPrisma04_rec-average_dwi_label-SC_seg.json} (100%) rename derivatives/labels/sub-fslPrisma04/dwi/{sub-fslPrisma04_rec-average_dwi_seg-manual.nii.gz => sub-fslPrisma04_rec-average_dwi_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-fslPrisma05/anat/{sub-fslPrisma05_flip-1_mt-on_space-other_MTS_seg-manual.json => sub-fslPrisma05_flip-1_mt-on_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-fslPrisma05/anat/{sub-fslPrisma05_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz => sub-fslPrisma05_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-fslPrisma05/anat/{sub-fslPrisma05_flip-2_mt-off_space-other_MTS_seg-manual.json => sub-fslPrisma05_flip-2_mt-off_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-fslPrisma05/anat/{sub-fslPrisma05_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz => sub-fslPrisma05_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-fslPrisma05/anat/{sub-fslPrisma05_space-other_T1w_seg-manual.json => sub-fslPrisma05_space-other_T1w_label-SC_seg.json} (100%) rename derivatives/labels/sub-fslPrisma05/anat/{sub-fslPrisma05_space-other_T1w_seg-manual.nii.gz => sub-fslPrisma05_space-other_T1w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-fslPrisma05/anat/{sub-fslPrisma05_space-other_T1w_labels-disc-manual.json => sub-fslPrisma05_space-other_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-fslPrisma05/anat/{sub-fslPrisma05_space-other_T1w_labels-disc-manual.nii.gz => sub-fslPrisma05_space-other_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-fslPrisma05/anat/{sub-fslPrisma05_space-other_T2star_seg-manual.json => sub-fslPrisma05_space-other_T2star_label-SC_seg.json} (100%) rename derivatives/labels/sub-fslPrisma05/anat/{sub-fslPrisma05_space-other_T2star_seg-manual.nii.gz => sub-fslPrisma05_space-other_T2star_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-fslPrisma05/anat/{sub-fslPrisma05_space-other_T2w_seg-manual.json => sub-fslPrisma05_space-other_T2w_label-SC_seg.json} (100%) rename derivatives/labels/sub-fslPrisma05/anat/{sub-fslPrisma05_space-other_T2w_seg-manual.nii.gz => sub-fslPrisma05_space-other_T2w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-fslPrisma05/anat/{sub-fslPrisma05_space-other_T2w_labels-disc-manual.json => sub-fslPrisma05_space-other_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-fslPrisma05/anat/{sub-fslPrisma05_space-other_T2w_labels-disc-manual.nii.gz => sub-fslPrisma05_space-other_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-fslPrisma05/dwi/{sub-fslPrisma05_rec-average_dwi_seg-manual.json => sub-fslPrisma05_rec-average_dwi_label-SC_seg.json} (100%) rename derivatives/labels/sub-fslPrisma05/dwi/{sub-fslPrisma05_rec-average_dwi_seg-manual.nii.gz => sub-fslPrisma05_rec-average_dwi_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-fslPrisma06/anat/{sub-fslPrisma06_flip-1_mt-on_space-other_MTS_seg-manual.json => sub-fslPrisma06_flip-1_mt-on_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-fslPrisma06/anat/{sub-fslPrisma06_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz => sub-fslPrisma06_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-fslPrisma06/anat/{sub-fslPrisma06_flip-2_mt-off_space-other_MTS_seg-manual.json => sub-fslPrisma06_flip-2_mt-off_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-fslPrisma06/anat/{sub-fslPrisma06_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz => sub-fslPrisma06_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-fslPrisma06/anat/{sub-fslPrisma06_space-other_T1w_seg-manual.json => sub-fslPrisma06_space-other_T1w_label-SC_seg.json} (100%) rename derivatives/labels/sub-fslPrisma06/anat/{sub-fslPrisma06_space-other_T1w_seg-manual.nii.gz => sub-fslPrisma06_space-other_T1w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-fslPrisma06/anat/{sub-fslPrisma06_space-other_T1w_labels-disc-manual.json => sub-fslPrisma06_space-other_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-fslPrisma06/anat/{sub-fslPrisma06_space-other_T1w_labels-disc-manual.nii.gz => sub-fslPrisma06_space-other_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-fslPrisma06/anat/{sub-fslPrisma06_space-other_T2star_seg-manual.json => sub-fslPrisma06_space-other_T2star_label-SC_seg.json} (100%) rename derivatives/labels/sub-fslPrisma06/anat/{sub-fslPrisma06_space-other_T2star_seg-manual.nii.gz => sub-fslPrisma06_space-other_T2star_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-fslPrisma06/anat/{sub-fslPrisma06_space-other_T2w_seg-manual.json => sub-fslPrisma06_space-other_T2w_label-SC_seg.json} (100%) rename derivatives/labels/sub-fslPrisma06/anat/{sub-fslPrisma06_space-other_T2w_seg-manual.nii.gz => sub-fslPrisma06_space-other_T2w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-fslPrisma06/anat/{sub-fslPrisma06_space-other_T2w_labels-disc-manual.json => sub-fslPrisma06_space-other_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-fslPrisma06/anat/{sub-fslPrisma06_space-other_T2w_labels-disc-manual.nii.gz => sub-fslPrisma06_space-other_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-fslPrisma06/dwi/{sub-fslPrisma06_rec-average_dwi_seg-manual.json => sub-fslPrisma06_rec-average_dwi_label-SC_seg.json} (100%) rename derivatives/labels/sub-fslPrisma06/dwi/{sub-fslPrisma06_rec-average_dwi_seg-manual.nii.gz => sub-fslPrisma06_rec-average_dwi_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-geneva01/anat/{sub-geneva01_flip-1_mt-on_space-other_MTS_seg-manual.json => sub-geneva01_flip-1_mt-on_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-geneva01/anat/{sub-geneva01_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz => sub-geneva01_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-geneva01/anat/{sub-geneva01_flip-2_mt-off_space-other_MTS_seg-manual.json => sub-geneva01_flip-2_mt-off_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-geneva01/anat/{sub-geneva01_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz => sub-geneva01_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-geneva01/anat/{sub-geneva01_space-other_T1w_seg-manual.json => sub-geneva01_space-other_T1w_label-SC_seg.json} (100%) rename derivatives/labels/sub-geneva01/anat/{sub-geneva01_space-other_T1w_seg-manual.nii.gz => sub-geneva01_space-other_T1w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-geneva01/anat/{sub-geneva01_space-other_T1w_labels-disc-manual.json => sub-geneva01_space-other_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-geneva01/anat/{sub-geneva01_space-other_T1w_labels-disc-manual.nii.gz => sub-geneva01_space-other_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-geneva01/anat/{sub-geneva01_space-other_T2star_seg-manual.json => sub-geneva01_space-other_T2star_label-SC_seg.json} (100%) rename derivatives/labels/sub-geneva01/anat/{sub-geneva01_space-other_T2star_seg-manual.nii.gz => sub-geneva01_space-other_T2star_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-geneva01/anat/{sub-geneva01_space-other_T2w_seg-manual.json => sub-geneva01_space-other_T2w_label-SC_seg.json} (100%) rename derivatives/labels/sub-geneva01/anat/{sub-geneva01_space-other_T2w_seg-manual.nii.gz => sub-geneva01_space-other_T2w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-geneva01/anat/{sub-geneva01_space-other_T2w_labels-disc-manual.json => sub-geneva01_space-other_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-geneva01/anat/{sub-geneva01_space-other_T2w_labels-disc-manual.nii.gz => sub-geneva01_space-other_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-geneva01/dwi/{sub-geneva01_rec-average_dwi_seg-manual.json => sub-geneva01_rec-average_dwi_label-SC_seg.json} (100%) rename derivatives/labels/sub-geneva01/dwi/{sub-geneva01_rec-average_dwi_seg-manual.nii.gz => sub-geneva01_rec-average_dwi_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-geneva02/anat/{sub-geneva02_flip-1_mt-on_space-other_MTS_seg-manual.json => sub-geneva02_flip-1_mt-on_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-geneva02/anat/{sub-geneva02_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz => sub-geneva02_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-geneva02/anat/{sub-geneva02_flip-2_mt-off_space-other_MTS_seg-manual.json => sub-geneva02_flip-2_mt-off_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-geneva02/anat/{sub-geneva02_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz => sub-geneva02_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-geneva02/anat/{sub-geneva02_space-other_T1w_seg-manual.json => sub-geneva02_space-other_T1w_label-SC_seg.json} (100%) rename derivatives/labels/sub-geneva02/anat/{sub-geneva02_space-other_T1w_seg-manual.nii.gz => sub-geneva02_space-other_T1w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-geneva02/anat/{sub-geneva02_space-other_T1w_labels-disc-manual.json => sub-geneva02_space-other_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-geneva02/anat/{sub-geneva02_space-other_T1w_labels-disc-manual.nii.gz => sub-geneva02_space-other_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-geneva02/anat/{sub-geneva02_space-other_T2star_seg-manual.json => sub-geneva02_space-other_T2star_label-SC_seg.json} (100%) rename derivatives/labels/sub-geneva02/anat/{sub-geneva02_space-other_T2star_seg-manual.nii.gz => sub-geneva02_space-other_T2star_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-geneva02/anat/{sub-geneva02_space-other_T2w_seg-manual.json => sub-geneva02_space-other_T2w_label-SC_seg.json} (100%) rename derivatives/labels/sub-geneva02/anat/{sub-geneva02_space-other_T2w_seg-manual.nii.gz => sub-geneva02_space-other_T2w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-geneva02/anat/{sub-geneva02_space-other_T2w_labels-disc-manual.json => sub-geneva02_space-other_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-geneva02/anat/{sub-geneva02_space-other_T2w_labels-disc-manual.nii.gz => sub-geneva02_space-other_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-geneva02/dwi/{sub-geneva02_rec-average_dwi_seg-manual.json => sub-geneva02_rec-average_dwi_label-SC_seg.json} (100%) rename derivatives/labels/sub-geneva02/dwi/{sub-geneva02_rec-average_dwi_seg-manual.nii.gz => sub-geneva02_rec-average_dwi_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-geneva03/anat/{sub-geneva03_flip-1_mt-on_space-other_MTS_seg-manual.json => sub-geneva03_flip-1_mt-on_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-geneva03/anat/{sub-geneva03_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz => sub-geneva03_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-geneva03/anat/{sub-geneva03_flip-2_mt-off_space-other_MTS_seg-manual.json => sub-geneva03_flip-2_mt-off_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-geneva03/anat/{sub-geneva03_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz => sub-geneva03_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-geneva03/anat/{sub-geneva03_space-other_T1w_seg-manual.json => sub-geneva03_space-other_T1w_label-SC_seg.json} (100%) rename derivatives/labels/sub-geneva03/anat/{sub-geneva03_space-other_T1w_seg-manual.nii.gz => sub-geneva03_space-other_T1w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-geneva03/anat/{sub-geneva03_space-other_T1w_labels-disc-manual.json => sub-geneva03_space-other_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-geneva03/anat/{sub-geneva03_space-other_T1w_labels-disc-manual.nii.gz => sub-geneva03_space-other_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-geneva03/anat/{sub-geneva03_space-other_T2star_seg-manual.json => sub-geneva03_space-other_T2star_label-SC_seg.json} (100%) rename derivatives/labels/sub-geneva03/anat/{sub-geneva03_space-other_T2star_seg-manual.nii.gz => sub-geneva03_space-other_T2star_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-geneva03/anat/{sub-geneva03_space-other_T2w_seg-manual.json => sub-geneva03_space-other_T2w_label-SC_seg.json} (100%) rename derivatives/labels/sub-geneva03/anat/{sub-geneva03_space-other_T2w_seg-manual.nii.gz => sub-geneva03_space-other_T2w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-geneva03/anat/{sub-geneva03_space-other_T2w_labels-disc-manual.json => sub-geneva03_space-other_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-geneva03/anat/{sub-geneva03_space-other_T2w_labels-disc-manual.nii.gz => sub-geneva03_space-other_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-geneva03/dwi/{sub-geneva03_rec-average_dwi_seg-manual.json => sub-geneva03_rec-average_dwi_label-SC_seg.json} (100%) rename derivatives/labels/sub-geneva03/dwi/{sub-geneva03_rec-average_dwi_seg-manual.nii.gz => sub-geneva03_rec-average_dwi_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-geneva04/anat/{sub-geneva04_flip-1_mt-on_space-other_MTS_seg-manual.json => sub-geneva04_flip-1_mt-on_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-geneva04/anat/{sub-geneva04_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz => sub-geneva04_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-geneva04/anat/{sub-geneva04_flip-2_mt-off_space-other_MTS_seg-manual.json => sub-geneva04_flip-2_mt-off_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-geneva04/anat/{sub-geneva04_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz => sub-geneva04_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-geneva04/anat/{sub-geneva04_space-other_T1w_seg-manual.json => sub-geneva04_space-other_T1w_label-SC_seg.json} (100%) rename derivatives/labels/sub-geneva04/anat/{sub-geneva04_space-other_T1w_seg-manual.nii.gz => sub-geneva04_space-other_T1w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-geneva04/anat/{sub-geneva04_space-other_T1w_labels-disc-manual.json => sub-geneva04_space-other_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-geneva04/anat/{sub-geneva04_space-other_T1w_labels-disc-manual.nii.gz => sub-geneva04_space-other_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-geneva04/anat/{sub-geneva04_space-other_T2star_seg-manual.json => sub-geneva04_space-other_T2star_label-SC_seg.json} (100%) rename derivatives/labels/sub-geneva04/anat/{sub-geneva04_space-other_T2star_seg-manual.nii.gz => sub-geneva04_space-other_T2star_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-geneva04/anat/{sub-geneva04_space-other_T2w_csfseg-manual.json => sub-geneva04_space-other_T2w_csflabel-SC_seg.json} (100%) rename derivatives/labels/sub-geneva04/anat/{sub-geneva04_space-other_T2w_csfseg-manual.nii.gz => sub-geneva04_space-other_T2w_csflabel-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-geneva04/anat/{sub-geneva04_space-other_T2w_seg-manual.json => sub-geneva04_space-other_T2w_label-SC_seg.json} (100%) rename derivatives/labels/sub-geneva04/anat/{sub-geneva04_space-other_T2w_seg-manual.nii.gz => sub-geneva04_space-other_T2w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-geneva04/anat/{sub-geneva04_space-other_T2w_labels-disc-manual.json => sub-geneva04_space-other_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-geneva04/anat/{sub-geneva04_space-other_T2w_labels-disc-manual.nii.gz => sub-geneva04_space-other_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-geneva04/dwi/{sub-geneva04_rec-average_dwi_seg-manual.json => sub-geneva04_rec-average_dwi_label-SC_seg.json} (100%) rename derivatives/labels/sub-geneva04/dwi/{sub-geneva04_rec-average_dwi_seg-manual.nii.gz => sub-geneva04_rec-average_dwi_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-geneva05/anat/{sub-geneva05_flip-1_mt-on_space-other_MTS_seg-manual.json => sub-geneva05_flip-1_mt-on_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-geneva05/anat/{sub-geneva05_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz => sub-geneva05_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-geneva05/anat/{sub-geneva05_flip-2_mt-off_space-other_MTS_seg-manual.json => sub-geneva05_flip-2_mt-off_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-geneva05/anat/{sub-geneva05_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz => sub-geneva05_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-geneva05/anat/{sub-geneva05_space-other_T1w_seg-manual.json => sub-geneva05_space-other_T1w_label-SC_seg.json} (100%) rename derivatives/labels/sub-geneva05/anat/{sub-geneva05_space-other_T1w_seg-manual.nii.gz => sub-geneva05_space-other_T1w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-geneva05/anat/{sub-geneva05_space-other_T1w_labels-disc-manual.json => sub-geneva05_space-other_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-geneva05/anat/{sub-geneva05_space-other_T1w_labels-disc-manual.nii.gz => sub-geneva05_space-other_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-geneva05/anat/{sub-geneva05_space-other_T2star_seg-manual.json => sub-geneva05_space-other_T2star_label-SC_seg.json} (100%) rename derivatives/labels/sub-geneva05/anat/{sub-geneva05_space-other_T2star_seg-manual.nii.gz => sub-geneva05_space-other_T2star_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-geneva05/anat/{sub-geneva05_space-other_T2w_seg-manual.json => sub-geneva05_space-other_T2w_label-SC_seg.json} (100%) rename derivatives/labels/sub-geneva05/anat/{sub-geneva05_space-other_T2w_seg-manual.nii.gz => sub-geneva05_space-other_T2w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-geneva05/anat/{sub-geneva05_space-other_T2w_labels-disc-manual.json => sub-geneva05_space-other_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-geneva05/anat/{sub-geneva05_space-other_T2w_labels-disc-manual.nii.gz => sub-geneva05_space-other_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-geneva05/dwi/{sub-geneva05_rec-average_dwi_seg-manual.json => sub-geneva05_rec-average_dwi_label-SC_seg.json} (100%) rename derivatives/labels/sub-geneva05/dwi/{sub-geneva05_rec-average_dwi_seg-manual.nii.gz => sub-geneva05_rec-average_dwi_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-geneva06/anat/{sub-geneva06_flip-1_mt-on_space-other_MTS_seg-manual.json => sub-geneva06_flip-1_mt-on_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-geneva06/anat/{sub-geneva06_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz => sub-geneva06_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-geneva06/anat/{sub-geneva06_flip-2_mt-off_space-other_MTS_seg-manual.json => sub-geneva06_flip-2_mt-off_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-geneva06/anat/{sub-geneva06_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz => sub-geneva06_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-geneva06/anat/{sub-geneva06_space-other_T1w_seg-manual.json => sub-geneva06_space-other_T1w_label-SC_seg.json} (100%) rename derivatives/labels/sub-geneva06/anat/{sub-geneva06_space-other_T1w_seg-manual.nii.gz => sub-geneva06_space-other_T1w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-geneva06/anat/{sub-geneva06_space-other_T1w_labels-disc-manual.json => sub-geneva06_space-other_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-geneva06/anat/{sub-geneva06_space-other_T1w_labels-disc-manual.nii.gz => sub-geneva06_space-other_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-geneva06/anat/{sub-geneva06_space-other_T2star_seg-manual.json => sub-geneva06_space-other_T2star_label-SC_seg.json} (100%) rename derivatives/labels/sub-geneva06/anat/{sub-geneva06_space-other_T2star_seg-manual.nii.gz => sub-geneva06_space-other_T2star_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-geneva06/anat/{sub-geneva06_space-other_T2w_seg-manual.json => sub-geneva06_space-other_T2w_label-SC_seg.json} (100%) rename derivatives/labels/sub-geneva06/anat/{sub-geneva06_space-other_T2w_seg-manual.nii.gz => sub-geneva06_space-other_T2w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-geneva06/anat/{sub-geneva06_space-other_T2w_labels-disc-manual.json => sub-geneva06_space-other_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-geneva06/anat/{sub-geneva06_space-other_T2w_labels-disc-manual.nii.gz => sub-geneva06_space-other_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-geneva06/dwi/{sub-geneva06_rec-average_dwi_seg-manual.json => sub-geneva06_rec-average_dwi_label-SC_seg.json} (100%) rename derivatives/labels/sub-geneva06/dwi/{sub-geneva06_rec-average_dwi_seg-manual.nii.gz => sub-geneva06_rec-average_dwi_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-hamburg01/anat/{sub-hamburg01_flip-1_mt-on_space-other_MTS_seg-manual.json => sub-hamburg01_flip-1_mt-on_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-hamburg01/anat/{sub-hamburg01_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz => sub-hamburg01_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-hamburg01/anat/{sub-hamburg01_flip-2_mt-off_space-other_MTS_seg-manual.json => sub-hamburg01_flip-2_mt-off_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-hamburg01/anat/{sub-hamburg01_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz => sub-hamburg01_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-hamburg01/anat/{sub-hamburg01_space-other_T1w_seg-manual.json => sub-hamburg01_space-other_T1w_label-SC_seg.json} (100%) rename derivatives/labels/sub-hamburg01/anat/{sub-hamburg01_space-other_T1w_seg-manual.nii.gz => sub-hamburg01_space-other_T1w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-hamburg01/anat/{sub-hamburg01_space-other_T1w_labels-disc-manual.json => sub-hamburg01_space-other_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-hamburg01/anat/{sub-hamburg01_space-other_T1w_labels-disc-manual.nii.gz => sub-hamburg01_space-other_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-hamburg01/anat/{sub-hamburg01_space-other_T2star_seg-manual.json => sub-hamburg01_space-other_T2star_label-SC_seg.json} (100%) rename derivatives/labels/sub-hamburg01/anat/{sub-hamburg01_space-other_T2star_seg-manual.nii.gz => sub-hamburg01_space-other_T2star_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-hamburg01/anat/{sub-hamburg01_space-other_T2w_seg-manual.json => sub-hamburg01_space-other_T2w_label-SC_seg.json} (100%) rename derivatives/labels/sub-hamburg01/anat/{sub-hamburg01_space-other_T2w_seg-manual.nii.gz => sub-hamburg01_space-other_T2w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-hamburg01/anat/{sub-hamburg01_space-other_T2w_labels-disc-manual.json => sub-hamburg01_space-other_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-hamburg01/anat/{sub-hamburg01_space-other_T2w_labels-disc-manual.nii.gz => sub-hamburg01_space-other_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-hamburg01/dwi/{sub-hamburg01_rec-average_dwi_seg-manual.json => sub-hamburg01_rec-average_dwi_label-SC_seg.json} (100%) rename derivatives/labels/sub-hamburg01/dwi/{sub-hamburg01_rec-average_dwi_seg-manual.nii.gz => sub-hamburg01_rec-average_dwi_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-hamburg02/anat/{sub-hamburg02_flip-1_mt-on_space-other_MTS_seg-manual.json => sub-hamburg02_flip-1_mt-on_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-hamburg02/anat/{sub-hamburg02_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz => sub-hamburg02_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-hamburg02/anat/{sub-hamburg02_flip-2_mt-off_space-other_MTS_seg-manual.json => sub-hamburg02_flip-2_mt-off_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-hamburg02/anat/{sub-hamburg02_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz => sub-hamburg02_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-hamburg02/anat/{sub-hamburg02_space-other_T1w_seg-manual.json => sub-hamburg02_space-other_T1w_label-SC_seg.json} (100%) rename derivatives/labels/sub-hamburg02/anat/{sub-hamburg02_space-other_T1w_seg-manual.nii.gz => sub-hamburg02_space-other_T1w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-hamburg02/anat/{sub-hamburg02_space-other_T1w_labels-disc-manual.json => sub-hamburg02_space-other_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-hamburg02/anat/{sub-hamburg02_space-other_T1w_labels-disc-manual.nii.gz => sub-hamburg02_space-other_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-hamburg02/anat/{sub-hamburg02_space-other_T2star_seg-manual.json => sub-hamburg02_space-other_T2star_label-SC_seg.json} (100%) rename derivatives/labels/sub-hamburg02/anat/{sub-hamburg02_space-other_T2star_seg-manual.nii.gz => sub-hamburg02_space-other_T2star_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-hamburg02/anat/{sub-hamburg02_space-other_T2w_seg-manual.json => sub-hamburg02_space-other_T2w_label-SC_seg.json} (100%) rename derivatives/labels/sub-hamburg02/anat/{sub-hamburg02_space-other_T2w_seg-manual.nii.gz => sub-hamburg02_space-other_T2w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-hamburg02/anat/{sub-hamburg02_space-other_T2w_labels-disc-manual.json => sub-hamburg02_space-other_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-hamburg02/anat/{sub-hamburg02_space-other_T2w_labels-disc-manual.nii.gz => sub-hamburg02_space-other_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-hamburg02/dwi/{sub-hamburg02_rec-average_dwi_seg-manual.json => sub-hamburg02_rec-average_dwi_label-SC_seg.json} (100%) rename derivatives/labels/sub-hamburg02/dwi/{sub-hamburg02_rec-average_dwi_seg-manual.nii.gz => sub-hamburg02_rec-average_dwi_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-hamburg03/anat/{sub-hamburg03_flip-1_mt-on_space-other_MTS_seg-manual.json => sub-hamburg03_flip-1_mt-on_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-hamburg03/anat/{sub-hamburg03_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz => sub-hamburg03_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-hamburg03/anat/{sub-hamburg03_flip-2_mt-off_space-other_MTS_seg-manual.json => sub-hamburg03_flip-2_mt-off_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-hamburg03/anat/{sub-hamburg03_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz => sub-hamburg03_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-hamburg03/anat/{sub-hamburg03_space-other_T1w_seg-manual.json => sub-hamburg03_space-other_T1w_label-SC_seg.json} (100%) rename derivatives/labels/sub-hamburg03/anat/{sub-hamburg03_space-other_T1w_seg-manual.nii.gz => sub-hamburg03_space-other_T1w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-hamburg03/anat/{sub-hamburg03_space-other_T1w_labels-disc-manual.json => sub-hamburg03_space-other_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-hamburg03/anat/{sub-hamburg03_space-other_T1w_labels-disc-manual.nii.gz => sub-hamburg03_space-other_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-hamburg03/anat/{sub-hamburg03_space-other_T2star_seg-manual.json => sub-hamburg03_space-other_T2star_label-SC_seg.json} (100%) rename derivatives/labels/sub-hamburg03/anat/{sub-hamburg03_space-other_T2star_seg-manual.nii.gz => sub-hamburg03_space-other_T2star_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-hamburg03/anat/{sub-hamburg03_space-other_T2w_seg-manual.json => sub-hamburg03_space-other_T2w_label-SC_seg.json} (100%) rename derivatives/labels/sub-hamburg03/anat/{sub-hamburg03_space-other_T2w_seg-manual.nii.gz => sub-hamburg03_space-other_T2w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-hamburg03/anat/{sub-hamburg03_space-other_T2w_labels-disc-manual.json => sub-hamburg03_space-other_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-hamburg03/anat/{sub-hamburg03_space-other_T2w_labels-disc-manual.nii.gz => sub-hamburg03_space-other_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-hamburg03/dwi/{sub-hamburg03_rec-average_dwi_seg-manual.json => sub-hamburg03_rec-average_dwi_label-SC_seg.json} (100%) rename derivatives/labels/sub-hamburg03/dwi/{sub-hamburg03_rec-average_dwi_seg-manual.nii.gz => sub-hamburg03_rec-average_dwi_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-hamburg04/anat/{sub-hamburg04_flip-1_mt-on_space-other_MTS_seg-manual.json => sub-hamburg04_flip-1_mt-on_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-hamburg04/anat/{sub-hamburg04_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz => sub-hamburg04_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-hamburg04/anat/{sub-hamburg04_flip-2_mt-off_space-other_MTS_seg-manual.json => sub-hamburg04_flip-2_mt-off_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-hamburg04/anat/{sub-hamburg04_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz => sub-hamburg04_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-hamburg04/anat/{sub-hamburg04_space-other_T1w_seg-manual.json => sub-hamburg04_space-other_T1w_label-SC_seg.json} (100%) rename derivatives/labels/sub-hamburg04/anat/{sub-hamburg04_space-other_T1w_seg-manual.nii.gz => sub-hamburg04_space-other_T1w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-hamburg04/anat/{sub-hamburg04_space-other_T1w_labels-disc-manual.json => sub-hamburg04_space-other_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-hamburg04/anat/{sub-hamburg04_space-other_T1w_labels-disc-manual.nii.gz => sub-hamburg04_space-other_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-hamburg04/anat/{sub-hamburg04_space-other_T2star_seg-manual.json => sub-hamburg04_space-other_T2star_label-SC_seg.json} (100%) rename derivatives/labels/sub-hamburg04/anat/{sub-hamburg04_space-other_T2star_seg-manual.nii.gz => sub-hamburg04_space-other_T2star_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-hamburg04/anat/{sub-hamburg04_space-other_T2w_seg-manual.json => sub-hamburg04_space-other_T2w_label-SC_seg.json} (100%) rename derivatives/labels/sub-hamburg04/anat/{sub-hamburg04_space-other_T2w_seg-manual.nii.gz => sub-hamburg04_space-other_T2w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-hamburg04/anat/{sub-hamburg04_space-other_T2w_labels-disc-manual.json => sub-hamburg04_space-other_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-hamburg04/anat/{sub-hamburg04_space-other_T2w_labels-disc-manual.nii.gz => sub-hamburg04_space-other_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-hamburg04/dwi/{sub-hamburg04_rec-average_dwi_seg-manual.json => sub-hamburg04_rec-average_dwi_label-SC_seg.json} (100%) rename derivatives/labels/sub-hamburg04/dwi/{sub-hamburg04_rec-average_dwi_seg-manual.nii.gz => sub-hamburg04_rec-average_dwi_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-hamburg05/anat/{sub-hamburg05_flip-1_mt-on_space-other_MTS_seg-manual.json => sub-hamburg05_flip-1_mt-on_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-hamburg05/anat/{sub-hamburg05_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz => sub-hamburg05_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-hamburg05/anat/{sub-hamburg05_flip-2_mt-off_space-other_MTS_seg-manual.json => sub-hamburg05_flip-2_mt-off_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-hamburg05/anat/{sub-hamburg05_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz => sub-hamburg05_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-hamburg05/anat/{sub-hamburg05_space-other_T1w_seg-manual.json => sub-hamburg05_space-other_T1w_label-SC_seg.json} (100%) rename derivatives/labels/sub-hamburg05/anat/{sub-hamburg05_space-other_T1w_seg-manual.nii.gz => sub-hamburg05_space-other_T1w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-hamburg05/anat/{sub-hamburg05_space-other_T1w_labels-disc-manual.json => sub-hamburg05_space-other_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-hamburg05/anat/{sub-hamburg05_space-other_T1w_labels-disc-manual.nii.gz => sub-hamburg05_space-other_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-hamburg05/anat/{sub-hamburg05_space-other_T2star_seg-manual.json => sub-hamburg05_space-other_T2star_label-SC_seg.json} (100%) rename derivatives/labels/sub-hamburg05/anat/{sub-hamburg05_space-other_T2star_seg-manual.nii.gz => sub-hamburg05_space-other_T2star_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-hamburg05/anat/{sub-hamburg05_space-other_T2w_seg-manual.json => sub-hamburg05_space-other_T2w_label-SC_seg.json} (100%) rename derivatives/labels/sub-hamburg05/anat/{sub-hamburg05_space-other_T2w_seg-manual.nii.gz => sub-hamburg05_space-other_T2w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-hamburg05/anat/{sub-hamburg05_space-other_T2w_labels-disc-manual.json => sub-hamburg05_space-other_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-hamburg05/anat/{sub-hamburg05_space-other_T2w_labels-disc-manual.nii.gz => sub-hamburg05_space-other_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-hamburg05/dwi/{sub-hamburg05_rec-average_dwi_seg-manual.json => sub-hamburg05_rec-average_dwi_label-SC_seg.json} (100%) rename derivatives/labels/sub-hamburg05/dwi/{sub-hamburg05_rec-average_dwi_seg-manual.nii.gz => sub-hamburg05_rec-average_dwi_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-hamburg06/anat/{sub-hamburg06_flip-1_mt-on_space-other_MTS_seg-manual.json => sub-hamburg06_flip-1_mt-on_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-hamburg06/anat/{sub-hamburg06_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz => sub-hamburg06_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-hamburg06/anat/{sub-hamburg06_flip-2_mt-off_space-other_MTS_seg-manual.json => sub-hamburg06_flip-2_mt-off_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-hamburg06/anat/{sub-hamburg06_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz => sub-hamburg06_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-hamburg06/anat/{sub-hamburg06_space-other_T1w_seg-manual.json => sub-hamburg06_space-other_T1w_label-SC_seg.json} (100%) rename derivatives/labels/sub-hamburg06/anat/{sub-hamburg06_space-other_T1w_seg-manual.nii.gz => sub-hamburg06_space-other_T1w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-hamburg06/anat/{sub-hamburg06_space-other_T1w_labels-disc-manual.json => sub-hamburg06_space-other_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-hamburg06/anat/{sub-hamburg06_space-other_T1w_labels-disc-manual.nii.gz => sub-hamburg06_space-other_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-hamburg06/anat/{sub-hamburg06_space-other_T2star_seg-manual.json => sub-hamburg06_space-other_T2star_label-SC_seg.json} (100%) rename derivatives/labels/sub-hamburg06/anat/{sub-hamburg06_space-other_T2star_seg-manual.nii.gz => sub-hamburg06_space-other_T2star_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-hamburg06/anat/{sub-hamburg06_space-other_T2w_seg-manual.json => sub-hamburg06_space-other_T2w_label-SC_seg.json} (100%) rename derivatives/labels/sub-hamburg06/anat/{sub-hamburg06_space-other_T2w_seg-manual.nii.gz => sub-hamburg06_space-other_T2w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-hamburg06/anat/{sub-hamburg06_space-other_T2w_labels-disc-manual.json => sub-hamburg06_space-other_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-hamburg06/anat/{sub-hamburg06_space-other_T2w_labels-disc-manual.nii.gz => sub-hamburg06_space-other_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-hamburg06/dwi/{sub-hamburg06_rec-average_dwi_seg-manual.json => sub-hamburg06_rec-average_dwi_label-SC_seg.json} (100%) rename derivatives/labels/sub-hamburg06/dwi/{sub-hamburg06_rec-average_dwi_seg-manual.nii.gz => sub-hamburg06_rec-average_dwi_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-juntendo750w01/anat/{sub-juntendo750w01_flip-1_mt-on_space-other_MTS_seg-manual.json => sub-juntendo750w01_flip-1_mt-on_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-juntendo750w01/anat/{sub-juntendo750w01_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz => sub-juntendo750w01_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-juntendo750w01/anat/{sub-juntendo750w01_flip-2_mt-off_space-other_MTS_seg-manual.json => sub-juntendo750w01_flip-2_mt-off_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-juntendo750w01/anat/{sub-juntendo750w01_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz => sub-juntendo750w01_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-juntendo750w01/anat/{sub-juntendo750w01_space-other_T1w_seg-manual.json => sub-juntendo750w01_space-other_T1w_label-SC_seg.json} (100%) rename derivatives/labels/sub-juntendo750w01/anat/{sub-juntendo750w01_space-other_T1w_seg-manual.nii.gz => sub-juntendo750w01_space-other_T1w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-juntendo750w01/anat/{sub-juntendo750w01_space-other_T1w_labels-disc-manual.json => sub-juntendo750w01_space-other_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-juntendo750w01/anat/{sub-juntendo750w01_space-other_T1w_labels-disc-manual.nii.gz => sub-juntendo750w01_space-other_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-juntendo750w01/anat/{sub-juntendo750w01_space-other_T2star_seg-manual.json => sub-juntendo750w01_space-other_T2star_label-SC_seg.json} (100%) rename derivatives/labels/sub-juntendo750w01/anat/{sub-juntendo750w01_space-other_T2star_seg-manual.nii.gz => sub-juntendo750w01_space-other_T2star_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-juntendo750w01/anat/{sub-juntendo750w01_space-other_T2w_seg-manual.json => sub-juntendo750w01_space-other_T2w_label-SC_seg.json} (100%) rename derivatives/labels/sub-juntendo750w01/anat/{sub-juntendo750w01_space-other_T2w_seg-manual.nii.gz => sub-juntendo750w01_space-other_T2w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-juntendo750w01/anat/{sub-juntendo750w01_space-other_T2w_labels-disc-manual.json => sub-juntendo750w01_space-other_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-juntendo750w01/anat/{sub-juntendo750w01_space-other_T2w_labels-disc-manual.nii.gz => sub-juntendo750w01_space-other_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-juntendo750w01/dwi/{sub-juntendo750w01_rec-average_dwi_seg-manual.json => sub-juntendo750w01_rec-average_dwi_label-SC_seg.json} (100%) rename derivatives/labels/sub-juntendo750w01/dwi/{sub-juntendo750w01_rec-average_dwi_seg-manual.nii.gz => sub-juntendo750w01_rec-average_dwi_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-juntendo750w02/anat/{sub-juntendo750w02_flip-1_mt-on_space-other_MTS_seg-manual.json => sub-juntendo750w02_flip-1_mt-on_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-juntendo750w02/anat/{sub-juntendo750w02_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz => sub-juntendo750w02_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-juntendo750w02/anat/{sub-juntendo750w02_flip-2_mt-off_space-other_MTS_seg-manual.json => sub-juntendo750w02_flip-2_mt-off_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-juntendo750w02/anat/{sub-juntendo750w02_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz => sub-juntendo750w02_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-juntendo750w02/anat/{sub-juntendo750w02_space-other_T1w_seg-manual.json => sub-juntendo750w02_space-other_T1w_label-SC_seg.json} (100%) rename derivatives/labels/sub-juntendo750w02/anat/{sub-juntendo750w02_space-other_T1w_seg-manual.nii.gz => sub-juntendo750w02_space-other_T1w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-juntendo750w02/anat/{sub-juntendo750w02_space-other_T1w_labels-disc-manual.json => sub-juntendo750w02_space-other_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-juntendo750w02/anat/{sub-juntendo750w02_space-other_T1w_labels-disc-manual.nii.gz => sub-juntendo750w02_space-other_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-juntendo750w02/anat/{sub-juntendo750w02_space-other_T2star_seg-manual.json => sub-juntendo750w02_space-other_T2star_label-SC_seg.json} (100%) rename derivatives/labels/sub-juntendo750w02/anat/{sub-juntendo750w02_space-other_T2star_seg-manual.nii.gz => sub-juntendo750w02_space-other_T2star_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-juntendo750w02/anat/{sub-juntendo750w02_space-other_T2w_seg-manual.json => sub-juntendo750w02_space-other_T2w_label-SC_seg.json} (100%) rename derivatives/labels/sub-juntendo750w02/anat/{sub-juntendo750w02_space-other_T2w_seg-manual.nii.gz => sub-juntendo750w02_space-other_T2w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-juntendo750w02/anat/{sub-juntendo750w02_space-other_T2w_labels-disc-manual.json => sub-juntendo750w02_space-other_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-juntendo750w02/anat/{sub-juntendo750w02_space-other_T2w_labels-disc-manual.nii.gz => sub-juntendo750w02_space-other_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-juntendo750w02/dwi/{sub-juntendo750w02_rec-average_dwi_seg-manual.json => sub-juntendo750w02_rec-average_dwi_label-SC_seg.json} (100%) rename derivatives/labels/sub-juntendo750w02/dwi/{sub-juntendo750w02_rec-average_dwi_seg-manual.nii.gz => sub-juntendo750w02_rec-average_dwi_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-juntendo750w03/anat/{sub-juntendo750w03_flip-1_mt-on_space-other_MTS_seg-manual.json => sub-juntendo750w03_flip-1_mt-on_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-juntendo750w03/anat/{sub-juntendo750w03_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz => sub-juntendo750w03_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-juntendo750w03/anat/{sub-juntendo750w03_flip-2_mt-off_space-other_MTS_seg-manual.json => sub-juntendo750w03_flip-2_mt-off_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-juntendo750w03/anat/{sub-juntendo750w03_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz => sub-juntendo750w03_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-juntendo750w03/anat/{sub-juntendo750w03_space-other_T1w_seg-manual.json => sub-juntendo750w03_space-other_T1w_label-SC_seg.json} (100%) rename derivatives/labels/sub-juntendo750w03/anat/{sub-juntendo750w03_space-other_T1w_seg-manual.nii.gz => sub-juntendo750w03_space-other_T1w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-juntendo750w03/anat/{sub-juntendo750w03_space-other_T1w_labels-disc-manual.json => sub-juntendo750w03_space-other_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-juntendo750w03/anat/{sub-juntendo750w03_space-other_T1w_labels-disc-manual.nii.gz => sub-juntendo750w03_space-other_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-juntendo750w03/anat/{sub-juntendo750w03_space-other_T2star_seg-manual.json => sub-juntendo750w03_space-other_T2star_label-SC_seg.json} (100%) rename derivatives/labels/sub-juntendo750w03/anat/{sub-juntendo750w03_space-other_T2star_seg-manual.nii.gz => sub-juntendo750w03_space-other_T2star_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-juntendo750w03/anat/{sub-juntendo750w03_space-other_T2w_seg-manual.json => sub-juntendo750w03_space-other_T2w_label-SC_seg.json} (100%) rename derivatives/labels/sub-juntendo750w03/anat/{sub-juntendo750w03_space-other_T2w_seg-manual.nii.gz => sub-juntendo750w03_space-other_T2w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-juntendo750w03/anat/{sub-juntendo750w03_space-other_T2w_labels-disc-manual.json => sub-juntendo750w03_space-other_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-juntendo750w03/anat/{sub-juntendo750w03_space-other_T2w_labels-disc-manual.nii.gz => sub-juntendo750w03_space-other_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-juntendo750w03/dwi/{sub-juntendo750w03_rec-average_dwi_seg-manual.json => sub-juntendo750w03_rec-average_dwi_label-SC_seg.json} (100%) rename derivatives/labels/sub-juntendo750w03/dwi/{sub-juntendo750w03_rec-average_dwi_seg-manual.nii.gz => sub-juntendo750w03_rec-average_dwi_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-juntendo750w04/anat/{sub-juntendo750w04_flip-1_mt-on_space-other_MTS_seg-manual.json => sub-juntendo750w04_flip-1_mt-on_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-juntendo750w04/anat/{sub-juntendo750w04_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz => sub-juntendo750w04_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-juntendo750w04/anat/{sub-juntendo750w04_flip-2_mt-off_space-other_MTS_seg-manual.json => sub-juntendo750w04_flip-2_mt-off_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-juntendo750w04/anat/{sub-juntendo750w04_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz => sub-juntendo750w04_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-juntendo750w04/anat/{sub-juntendo750w04_space-other_T1w_seg-manual.json => sub-juntendo750w04_space-other_T1w_label-SC_seg.json} (100%) rename derivatives/labels/sub-juntendo750w04/anat/{sub-juntendo750w04_space-other_T1w_seg-manual.nii.gz => sub-juntendo750w04_space-other_T1w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-juntendo750w04/anat/{sub-juntendo750w04_space-other_T1w_labels-disc-manual.json => sub-juntendo750w04_space-other_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-juntendo750w04/anat/{sub-juntendo750w04_space-other_T1w_labels-disc-manual.nii.gz => sub-juntendo750w04_space-other_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-juntendo750w04/anat/{sub-juntendo750w04_space-other_T2star_seg-manual.json => sub-juntendo750w04_space-other_T2star_label-SC_seg.json} (100%) rename derivatives/labels/sub-juntendo750w04/anat/{sub-juntendo750w04_space-other_T2star_seg-manual.nii.gz => sub-juntendo750w04_space-other_T2star_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-juntendo750w04/anat/{sub-juntendo750w04_space-other_T2w_seg-manual.json => sub-juntendo750w04_space-other_T2w_label-SC_seg.json} (100%) rename derivatives/labels/sub-juntendo750w04/anat/{sub-juntendo750w04_space-other_T2w_seg-manual.nii.gz => sub-juntendo750w04_space-other_T2w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-juntendo750w04/anat/{sub-juntendo750w04_space-other_T2w_labels-disc-manual.json => sub-juntendo750w04_space-other_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-juntendo750w04/anat/{sub-juntendo750w04_space-other_T2w_labels-disc-manual.nii.gz => sub-juntendo750w04_space-other_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-juntendo750w04/dwi/{sub-juntendo750w04_rec-average_dwi_seg-manual.json => sub-juntendo750w04_rec-average_dwi_label-SC_seg.json} (100%) rename derivatives/labels/sub-juntendo750w04/dwi/{sub-juntendo750w04_rec-average_dwi_seg-manual.nii.gz => sub-juntendo750w04_rec-average_dwi_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-juntendo750w05/anat/{sub-juntendo750w05_flip-1_mt-on_space-other_MTS_seg-manual.json => sub-juntendo750w05_flip-1_mt-on_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-juntendo750w05/anat/{sub-juntendo750w05_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz => sub-juntendo750w05_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-juntendo750w05/anat/{sub-juntendo750w05_flip-2_mt-off_space-other_MTS_seg-manual.json => sub-juntendo750w05_flip-2_mt-off_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-juntendo750w05/anat/{sub-juntendo750w05_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz => sub-juntendo750w05_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-juntendo750w05/anat/{sub-juntendo750w05_space-other_T1w_seg-manual.json => sub-juntendo750w05_space-other_T1w_label-SC_seg.json} (100%) rename derivatives/labels/sub-juntendo750w05/anat/{sub-juntendo750w05_space-other_T1w_seg-manual.nii.gz => sub-juntendo750w05_space-other_T1w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-juntendo750w05/anat/{sub-juntendo750w05_space-other_T1w_labels-disc-manual.json => sub-juntendo750w05_space-other_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-juntendo750w05/anat/{sub-juntendo750w05_space-other_T1w_labels-disc-manual.nii.gz => sub-juntendo750w05_space-other_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-juntendo750w05/anat/{sub-juntendo750w05_space-other_T2star_seg-manual.json => sub-juntendo750w05_space-other_T2star_label-SC_seg.json} (100%) rename derivatives/labels/sub-juntendo750w05/anat/{sub-juntendo750w05_space-other_T2star_seg-manual.nii.gz => sub-juntendo750w05_space-other_T2star_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-juntendo750w05/anat/{sub-juntendo750w05_space-other_T2w_seg-manual.json => sub-juntendo750w05_space-other_T2w_label-SC_seg.json} (100%) rename derivatives/labels/sub-juntendo750w05/anat/{sub-juntendo750w05_space-other_T2w_seg-manual.nii.gz => sub-juntendo750w05_space-other_T2w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-juntendo750w05/anat/{sub-juntendo750w05_space-other_T2w_labels-disc-manual.json => sub-juntendo750w05_space-other_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-juntendo750w05/anat/{sub-juntendo750w05_space-other_T2w_labels-disc-manual.nii.gz => sub-juntendo750w05_space-other_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-juntendo750w05/dwi/{sub-juntendo750w05_rec-average_dwi_seg-manual.json => sub-juntendo750w05_rec-average_dwi_label-SC_seg.json} (100%) rename derivatives/labels/sub-juntendo750w05/dwi/{sub-juntendo750w05_rec-average_dwi_seg-manual.nii.gz => sub-juntendo750w05_rec-average_dwi_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-juntendo750w06/anat/{sub-juntendo750w06_flip-1_mt-on_space-other_MTS_seg-manual.json => sub-juntendo750w06_flip-1_mt-on_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-juntendo750w06/anat/{sub-juntendo750w06_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz => sub-juntendo750w06_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-juntendo750w06/anat/{sub-juntendo750w06_flip-2_mt-off_space-other_MTS_seg-manual.json => sub-juntendo750w06_flip-2_mt-off_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-juntendo750w06/anat/{sub-juntendo750w06_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz => sub-juntendo750w06_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-juntendo750w06/anat/{sub-juntendo750w06_space-other_T1w_seg-manual.json => sub-juntendo750w06_space-other_T1w_label-SC_seg.json} (100%) rename derivatives/labels/sub-juntendo750w06/anat/{sub-juntendo750w06_space-other_T1w_seg-manual.nii.gz => sub-juntendo750w06_space-other_T1w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-juntendo750w06/anat/{sub-juntendo750w06_space-other_T1w_labels-disc-manual.json => sub-juntendo750w06_space-other_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-juntendo750w06/anat/{sub-juntendo750w06_space-other_T1w_labels-disc-manual.nii.gz => sub-juntendo750w06_space-other_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-juntendo750w06/anat/{sub-juntendo750w06_space-other_T2star_seg-manual.json => sub-juntendo750w06_space-other_T2star_label-SC_seg.json} (100%) rename derivatives/labels/sub-juntendo750w06/anat/{sub-juntendo750w06_space-other_T2star_seg-manual.nii.gz => sub-juntendo750w06_space-other_T2star_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-juntendo750w06/anat/{sub-juntendo750w06_space-other_T2w_seg-manual.json => sub-juntendo750w06_space-other_T2w_label-SC_seg.json} (100%) rename derivatives/labels/sub-juntendo750w06/anat/{sub-juntendo750w06_space-other_T2w_seg-manual.nii.gz => sub-juntendo750w06_space-other_T2w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-juntendo750w06/anat/{sub-juntendo750w06_space-other_T2w_labels-disc-manual.json => sub-juntendo750w06_space-other_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-juntendo750w06/anat/{sub-juntendo750w06_space-other_T2w_labels-disc-manual.nii.gz => sub-juntendo750w06_space-other_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-juntendo750w06/dwi/{sub-juntendo750w06_rec-average_dwi_seg-manual.json => sub-juntendo750w06_rec-average_dwi_label-SC_seg.json} (100%) rename derivatives/labels/sub-juntendo750w06/dwi/{sub-juntendo750w06_rec-average_dwi_seg-manual.nii.gz => sub-juntendo750w06_rec-average_dwi_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-mgh01/anat/{sub-mgh01_flip-1_mt-on_space-other_MTS_seg-manual.json => sub-mgh01_flip-1_mt-on_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-mgh01/anat/{sub-mgh01_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz => sub-mgh01_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-mgh01/anat/{sub-mgh01_flip-2_mt-off_space-other_MTS_seg-manual.json => sub-mgh01_flip-2_mt-off_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-mgh01/anat/{sub-mgh01_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz => sub-mgh01_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-mgh01/anat/{sub-mgh01_space-other_T1w_seg-manual.json => sub-mgh01_space-other_T1w_label-SC_seg.json} (100%) rename derivatives/labels/sub-mgh01/anat/{sub-mgh01_space-other_T1w_seg-manual.nii.gz => sub-mgh01_space-other_T1w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-mgh01/anat/{sub-mgh01_space-other_T1w_labels-disc-manual.json => sub-mgh01_space-other_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-mgh01/anat/{sub-mgh01_space-other_T1w_labels-disc-manual.nii.gz => sub-mgh01_space-other_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-mgh01/anat/{sub-mgh01_space-other_T2star_seg-manual.json => sub-mgh01_space-other_T2star_label-SC_seg.json} (100%) rename derivatives/labels/sub-mgh01/anat/{sub-mgh01_space-other_T2star_seg-manual.nii.gz => sub-mgh01_space-other_T2star_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-mgh01/anat/{sub-mgh01_space-other_T2w_seg-manual.json => sub-mgh01_space-other_T2w_label-SC_seg.json} (100%) rename derivatives/labels/sub-mgh01/anat/{sub-mgh01_space-other_T2w_seg-manual.nii.gz => sub-mgh01_space-other_T2w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-mgh01/anat/{sub-mgh01_space-other_T2w_labels-disc-manual.json => sub-mgh01_space-other_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-mgh01/anat/{sub-mgh01_space-other_T2w_labels-disc-manual.nii.gz => sub-mgh01_space-other_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-mgh01/dwi/{sub-mgh01_rec-average_dwi_seg-manual.json => sub-mgh01_rec-average_dwi_label-SC_seg.json} (100%) rename derivatives/labels/sub-mgh01/dwi/{sub-mgh01_rec-average_dwi_seg-manual.nii.gz => sub-mgh01_rec-average_dwi_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-mgh02/anat/{sub-mgh02_flip-1_mt-on_space-other_MTS_seg-manual.json => sub-mgh02_flip-1_mt-on_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-mgh02/anat/{sub-mgh02_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz => sub-mgh02_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-mgh02/anat/{sub-mgh02_flip-2_mt-off_space-other_MTS_seg-manual.json => sub-mgh02_flip-2_mt-off_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-mgh02/anat/{sub-mgh02_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz => sub-mgh02_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-mgh02/anat/{sub-mgh02_space-other_T1w_seg-manual.json => sub-mgh02_space-other_T1w_label-SC_seg.json} (100%) rename derivatives/labels/sub-mgh02/anat/{sub-mgh02_space-other_T1w_seg-manual.nii.gz => sub-mgh02_space-other_T1w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-mgh02/anat/{sub-mgh02_space-other_T1w_labels-disc-manual.json => sub-mgh02_space-other_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-mgh02/anat/{sub-mgh02_space-other_T1w_labels-disc-manual.nii.gz => sub-mgh02_space-other_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-mgh02/anat/{sub-mgh02_space-other_T2star_seg-manual.json => sub-mgh02_space-other_T2star_label-SC_seg.json} (100%) rename derivatives/labels/sub-mgh02/anat/{sub-mgh02_space-other_T2star_seg-manual.nii.gz => sub-mgh02_space-other_T2star_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-mgh02/anat/{sub-mgh02_space-other_T2w_seg-manual.json => sub-mgh02_space-other_T2w_label-SC_seg.json} (100%) rename derivatives/labels/sub-mgh02/anat/{sub-mgh02_space-other_T2w_seg-manual.nii.gz => sub-mgh02_space-other_T2w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-mgh02/anat/{sub-mgh02_space-other_T2w_labels-disc-manual.json => sub-mgh02_space-other_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-mgh02/anat/{sub-mgh02_space-other_T2w_labels-disc-manual.nii.gz => sub-mgh02_space-other_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-mgh02/dwi/{sub-mgh02_rec-average_dwi_seg-manual.json => sub-mgh02_rec-average_dwi_label-SC_seg.json} (100%) rename derivatives/labels/sub-mgh02/dwi/{sub-mgh02_rec-average_dwi_seg-manual.nii.gz => sub-mgh02_rec-average_dwi_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-mgh03/anat/{sub-mgh03_flip-1_mt-on_space-other_MTS_seg-manual.json => sub-mgh03_flip-1_mt-on_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-mgh03/anat/{sub-mgh03_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz => sub-mgh03_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-mgh03/anat/{sub-mgh03_flip-2_mt-off_space-other_MTS_seg-manual.json => sub-mgh03_flip-2_mt-off_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-mgh03/anat/{sub-mgh03_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz => sub-mgh03_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-mgh03/anat/{sub-mgh03_space-other_T1w_seg-manual.json => sub-mgh03_space-other_T1w_label-SC_seg.json} (100%) rename derivatives/labels/sub-mgh03/anat/{sub-mgh03_space-other_T1w_seg-manual.nii.gz => sub-mgh03_space-other_T1w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-mgh03/anat/{sub-mgh03_space-other_T1w_labels-disc-manual.json => sub-mgh03_space-other_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-mgh03/anat/{sub-mgh03_space-other_T1w_labels-disc-manual.nii.gz => sub-mgh03_space-other_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-mgh03/anat/{sub-mgh03_space-other_T2star_seg-manual.json => sub-mgh03_space-other_T2star_label-SC_seg.json} (100%) rename derivatives/labels/sub-mgh03/anat/{sub-mgh03_space-other_T2star_seg-manual.nii.gz => sub-mgh03_space-other_T2star_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-mgh03/anat/{sub-mgh03_space-other_T2w_seg-manual.json => sub-mgh03_space-other_T2w_label-SC_seg.json} (100%) rename derivatives/labels/sub-mgh03/anat/{sub-mgh03_space-other_T2w_seg-manual.nii.gz => sub-mgh03_space-other_T2w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-mgh03/anat/{sub-mgh03_space-other_T2w_labels-disc-manual.json => sub-mgh03_space-other_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-mgh03/anat/{sub-mgh03_space-other_T2w_labels-disc-manual.nii.gz => sub-mgh03_space-other_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-mgh03/dwi/{sub-mgh03_rec-average_dwi_seg-manual.json => sub-mgh03_rec-average_dwi_label-SC_seg.json} (100%) rename derivatives/labels/sub-mgh03/dwi/{sub-mgh03_rec-average_dwi_seg-manual.nii.gz => sub-mgh03_rec-average_dwi_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-mgh04/anat/{sub-mgh04_flip-1_mt-on_space-other_MTS_seg-manual.json => sub-mgh04_flip-1_mt-on_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-mgh04/anat/{sub-mgh04_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz => sub-mgh04_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-mgh04/anat/{sub-mgh04_flip-2_mt-off_space-other_MTS_seg-manual.json => sub-mgh04_flip-2_mt-off_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-mgh04/anat/{sub-mgh04_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz => sub-mgh04_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-mgh04/anat/{sub-mgh04_space-other_T1w_seg-manual.json => sub-mgh04_space-other_T1w_label-SC_seg.json} (100%) rename derivatives/labels/sub-mgh04/anat/{sub-mgh04_space-other_T1w_seg-manual.nii.gz => sub-mgh04_space-other_T1w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-mgh04/anat/{sub-mgh04_space-other_T1w_labels-disc-manual.json => sub-mgh04_space-other_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-mgh04/anat/{sub-mgh04_space-other_T1w_labels-disc-manual.nii.gz => sub-mgh04_space-other_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-mgh04/anat/{sub-mgh04_space-other_T2star_seg-manual.json => sub-mgh04_space-other_T2star_label-SC_seg.json} (100%) rename derivatives/labels/sub-mgh04/anat/{sub-mgh04_space-other_T2star_seg-manual.nii.gz => sub-mgh04_space-other_T2star_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-mgh04/anat/{sub-mgh04_space-other_T2w_seg-manual.json => sub-mgh04_space-other_T2w_label-SC_seg.json} (100%) rename derivatives/labels/sub-mgh04/anat/{sub-mgh04_space-other_T2w_seg-manual.nii.gz => sub-mgh04_space-other_T2w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-mgh04/anat/{sub-mgh04_space-other_T2w_labels-disc-manual.json => sub-mgh04_space-other_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-mgh04/anat/{sub-mgh04_space-other_T2w_labels-disc-manual.nii.gz => sub-mgh04_space-other_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-mgh04/dwi/{sub-mgh04_rec-average_dwi_seg-manual.json => sub-mgh04_rec-average_dwi_label-SC_seg.json} (100%) rename derivatives/labels/sub-mgh04/dwi/{sub-mgh04_rec-average_dwi_seg-manual.nii.gz => sub-mgh04_rec-average_dwi_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-mgh05/anat/{sub-mgh05_flip-1_mt-on_space-other_MTS_seg-manual.json => sub-mgh05_flip-1_mt-on_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-mgh05/anat/{sub-mgh05_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz => sub-mgh05_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-mgh05/anat/{sub-mgh05_flip-2_mt-off_space-other_MTS_seg-manual.json => sub-mgh05_flip-2_mt-off_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-mgh05/anat/{sub-mgh05_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz => sub-mgh05_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-mgh05/anat/{sub-mgh05_space-other_T1w_seg-manual.json => sub-mgh05_space-other_T1w_label-SC_seg.json} (100%) rename derivatives/labels/sub-mgh05/anat/{sub-mgh05_space-other_T1w_seg-manual.nii.gz => sub-mgh05_space-other_T1w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-mgh05/anat/{sub-mgh05_space-other_T1w_labels-disc-manual.json => sub-mgh05_space-other_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-mgh05/anat/{sub-mgh05_space-other_T1w_labels-disc-manual.nii.gz => sub-mgh05_space-other_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-mgh05/anat/{sub-mgh05_space-other_T2star_seg-manual.json => sub-mgh05_space-other_T2star_label-SC_seg.json} (100%) rename derivatives/labels/sub-mgh05/anat/{sub-mgh05_space-other_T2star_seg-manual.nii.gz => sub-mgh05_space-other_T2star_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-mgh05/anat/{sub-mgh05_space-other_T2w_seg-manual.json => sub-mgh05_space-other_T2w_label-SC_seg.json} (100%) rename derivatives/labels/sub-mgh05/anat/{sub-mgh05_space-other_T2w_seg-manual.nii.gz => sub-mgh05_space-other_T2w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-mgh05/anat/{sub-mgh05_space-other_T2w_labels-disc-manual.json => sub-mgh05_space-other_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-mgh05/anat/{sub-mgh05_space-other_T2w_labels-disc-manual.nii.gz => sub-mgh05_space-other_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-mgh05/dwi/{sub-mgh05_rec-average_dwi_seg-manual.json => sub-mgh05_rec-average_dwi_label-SC_seg.json} (100%) rename derivatives/labels/sub-mgh05/dwi/{sub-mgh05_rec-average_dwi_seg-manual.nii.gz => sub-mgh05_rec-average_dwi_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-mgh06/anat/{sub-mgh06_flip-1_mt-on_space-other_MTS_seg-manual.json => sub-mgh06_flip-1_mt-on_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-mgh06/anat/{sub-mgh06_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz => sub-mgh06_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-mgh06/anat/{sub-mgh06_flip-2_mt-off_space-other_MTS_seg-manual.json => sub-mgh06_flip-2_mt-off_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-mgh06/anat/{sub-mgh06_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz => sub-mgh06_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-mgh06/anat/{sub-mgh06_space-other_T1w_seg-manual.json => sub-mgh06_space-other_T1w_label-SC_seg.json} (100%) rename derivatives/labels/sub-mgh06/anat/{sub-mgh06_space-other_T1w_seg-manual.nii.gz => sub-mgh06_space-other_T1w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-mgh06/anat/{sub-mgh06_space-other_T1w_labels-disc-manual.json => sub-mgh06_space-other_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-mgh06/anat/{sub-mgh06_space-other_T1w_labels-disc-manual.nii.gz => sub-mgh06_space-other_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-mgh06/anat/{sub-mgh06_space-other_T2star_seg-manual.json => sub-mgh06_space-other_T2star_label-SC_seg.json} (100%) rename derivatives/labels/sub-mgh06/anat/{sub-mgh06_space-other_T2star_seg-manual.nii.gz => sub-mgh06_space-other_T2star_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-mgh06/anat/{sub-mgh06_space-other_T2w_seg-manual.json => sub-mgh06_space-other_T2w_label-SC_seg.json} (100%) rename derivatives/labels/sub-mgh06/anat/{sub-mgh06_space-other_T2w_seg-manual.nii.gz => sub-mgh06_space-other_T2w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-mgh06/anat/{sub-mgh06_space-other_T2w_labels-disc-manual.json => sub-mgh06_space-other_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-mgh06/anat/{sub-mgh06_space-other_T2w_labels-disc-manual.nii.gz => sub-mgh06_space-other_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-mgh06/dwi/{sub-mgh06_rec-average_dwi_seg-manual.json => sub-mgh06_rec-average_dwi_label-SC_seg.json} (100%) rename derivatives/labels/sub-mgh06/dwi/{sub-mgh06_rec-average_dwi_seg-manual.nii.gz => sub-mgh06_rec-average_dwi_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-milan01/anat/{sub-milan01_flip-1_mt-on_space-other_MTS_seg-manual.json => sub-milan01_flip-1_mt-on_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-milan01/anat/{sub-milan01_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz => sub-milan01_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-milan01/anat/{sub-milan01_flip-2_mt-off_space-other_MTS_seg-manual.json => sub-milan01_flip-2_mt-off_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-milan01/anat/{sub-milan01_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz => sub-milan01_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-milan01/anat/{sub-milan01_space-other_T1w_seg-manual.json => sub-milan01_space-other_T1w_label-SC_seg.json} (100%) rename derivatives/labels/sub-milan01/anat/{sub-milan01_space-other_T1w_seg-manual.nii.gz => sub-milan01_space-other_T1w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-milan01/anat/{sub-milan01_space-other_T1w_labels-disc-manual.json => sub-milan01_space-other_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-milan01/anat/{sub-milan01_space-other_T1w_labels-disc-manual.nii.gz => sub-milan01_space-other_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-milan01/anat/{sub-milan01_space-other_T2star_seg-manual.json => sub-milan01_space-other_T2star_label-SC_seg.json} (100%) rename derivatives/labels/sub-milan01/anat/{sub-milan01_space-other_T2star_seg-manual.nii.gz => sub-milan01_space-other_T2star_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-milan01/anat/{sub-milan01_space-other_T2w_seg-manual.json => sub-milan01_space-other_T2w_label-SC_seg.json} (100%) rename derivatives/labels/sub-milan01/anat/{sub-milan01_space-other_T2w_seg-manual.nii.gz => sub-milan01_space-other_T2w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-milan01/anat/{sub-milan01_space-other_T2w_labels-disc-manual.json => sub-milan01_space-other_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-milan01/anat/{sub-milan01_space-other_T2w_labels-disc-manual.nii.gz => sub-milan01_space-other_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-milan01/dwi/{sub-milan01_rec-average_dwi_seg-manual.json => sub-milan01_rec-average_dwi_label-SC_seg.json} (100%) rename derivatives/labels/sub-milan01/dwi/{sub-milan01_rec-average_dwi_seg-manual.nii.gz => sub-milan01_rec-average_dwi_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-milan02/anat/{sub-milan02_flip-1_mt-on_space-other_MTS_seg-manual.json => sub-milan02_flip-1_mt-on_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-milan02/anat/{sub-milan02_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz => sub-milan02_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-milan02/anat/{sub-milan02_flip-2_mt-off_space-other_MTS_seg-manual.json => sub-milan02_flip-2_mt-off_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-milan02/anat/{sub-milan02_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz => sub-milan02_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-milan02/anat/{sub-milan02_space-other_T1w_seg-manual.json => sub-milan02_space-other_T1w_label-SC_seg.json} (100%) rename derivatives/labels/sub-milan02/anat/{sub-milan02_space-other_T1w_seg-manual.nii.gz => sub-milan02_space-other_T1w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-milan02/anat/{sub-milan02_space-other_T1w_labels-disc-manual.json => sub-milan02_space-other_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-milan02/anat/{sub-milan02_space-other_T1w_labels-disc-manual.nii.gz => sub-milan02_space-other_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-milan02/anat/{sub-milan02_space-other_T2star_seg-manual.json => sub-milan02_space-other_T2star_label-SC_seg.json} (100%) rename derivatives/labels/sub-milan02/anat/{sub-milan02_space-other_T2star_seg-manual.nii.gz => sub-milan02_space-other_T2star_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-milan02/anat/{sub-milan02_space-other_T2w_seg-manual.json => sub-milan02_space-other_T2w_label-SC_seg.json} (100%) rename derivatives/labels/sub-milan02/anat/{sub-milan02_space-other_T2w_seg-manual.nii.gz => sub-milan02_space-other_T2w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-milan02/anat/{sub-milan02_space-other_T2w_labels-disc-manual.json => sub-milan02_space-other_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-milan02/anat/{sub-milan02_space-other_T2w_labels-disc-manual.nii.gz => sub-milan02_space-other_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-milan02/dwi/{sub-milan02_rec-average_dwi_seg-manual.json => sub-milan02_rec-average_dwi_label-SC_seg.json} (100%) rename derivatives/labels/sub-milan02/dwi/{sub-milan02_rec-average_dwi_seg-manual.nii.gz => sub-milan02_rec-average_dwi_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-milan03/anat/{sub-milan03_flip-1_mt-on_space-other_MTS_seg-manual.json => sub-milan03_flip-1_mt-on_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-milan03/anat/{sub-milan03_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz => sub-milan03_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-milan03/anat/{sub-milan03_flip-2_mt-off_space-other_MTS_seg-manual.json => sub-milan03_flip-2_mt-off_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-milan03/anat/{sub-milan03_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz => sub-milan03_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-milan03/anat/{sub-milan03_space-other_T1w_seg-manual.json => sub-milan03_space-other_T1w_label-SC_seg.json} (100%) rename derivatives/labels/sub-milan03/anat/{sub-milan03_space-other_T1w_seg-manual.nii.gz => sub-milan03_space-other_T1w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-milan03/anat/{sub-milan03_space-other_T1w_labels-disc-manual.json => sub-milan03_space-other_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-milan03/anat/{sub-milan03_space-other_T1w_labels-disc-manual.nii.gz => sub-milan03_space-other_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-milan03/anat/{sub-milan03_space-other_T2star_seg-manual.json => sub-milan03_space-other_T2star_label-SC_seg.json} (100%) rename derivatives/labels/sub-milan03/anat/{sub-milan03_space-other_T2star_seg-manual.nii.gz => sub-milan03_space-other_T2star_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-milan03/anat/{sub-milan03_space-other_T2w_seg-manual.json => sub-milan03_space-other_T2w_label-SC_seg.json} (100%) rename derivatives/labels/sub-milan03/anat/{sub-milan03_space-other_T2w_seg-manual.nii.gz => sub-milan03_space-other_T2w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-milan03/anat/{sub-milan03_space-other_T2w_labels-disc-manual.json => sub-milan03_space-other_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-milan03/anat/{sub-milan03_space-other_T2w_labels-disc-manual.nii.gz => sub-milan03_space-other_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-milan03/dwi/{sub-milan03_rec-average_dwi_seg-manual.json => sub-milan03_rec-average_dwi_label-SC_seg.json} (100%) rename derivatives/labels/sub-milan03/dwi/{sub-milan03_rec-average_dwi_seg-manual.nii.gz => sub-milan03_rec-average_dwi_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-milan04/anat/{sub-milan04_flip-1_mt-on_space-other_MTS_seg-manual.json => sub-milan04_flip-1_mt-on_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-milan04/anat/{sub-milan04_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz => sub-milan04_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-milan04/anat/{sub-milan04_flip-2_mt-off_space-other_MTS_seg-manual.json => sub-milan04_flip-2_mt-off_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-milan04/anat/{sub-milan04_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz => sub-milan04_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-milan04/anat/{sub-milan04_space-other_T1w_seg-manual.json => sub-milan04_space-other_T1w_label-SC_seg.json} (100%) rename derivatives/labels/sub-milan04/anat/{sub-milan04_space-other_T1w_seg-manual.nii.gz => sub-milan04_space-other_T1w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-milan04/anat/{sub-milan04_space-other_T1w_labels-disc-manual.json => sub-milan04_space-other_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-milan04/anat/{sub-milan04_space-other_T1w_labels-disc-manual.nii.gz => sub-milan04_space-other_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-milan04/anat/{sub-milan04_space-other_T2star_seg-manual.json => sub-milan04_space-other_T2star_label-SC_seg.json} (100%) rename derivatives/labels/sub-milan04/anat/{sub-milan04_space-other_T2star_seg-manual.nii.gz => sub-milan04_space-other_T2star_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-milan04/anat/{sub-milan04_space-other_T2w_seg-manual.json => sub-milan04_space-other_T2w_label-SC_seg.json} (100%) rename derivatives/labels/sub-milan04/anat/{sub-milan04_space-other_T2w_seg-manual.nii.gz => sub-milan04_space-other_T2w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-milan04/anat/{sub-milan04_space-other_T2w_labels-disc-manual.json => sub-milan04_space-other_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-milan04/anat/{sub-milan04_space-other_T2w_labels-disc-manual.nii.gz => sub-milan04_space-other_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-milan04/dwi/{sub-milan04_rec-average_dwi_seg-manual.json => sub-milan04_rec-average_dwi_label-SC_seg.json} (100%) rename derivatives/labels/sub-milan04/dwi/{sub-milan04_rec-average_dwi_seg-manual.nii.gz => sub-milan04_rec-average_dwi_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-milan05/anat/{sub-milan05_flip-1_mt-on_space-other_MTS_seg-manual.json => sub-milan05_flip-1_mt-on_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-milan05/anat/{sub-milan05_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz => sub-milan05_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-milan05/anat/{sub-milan05_flip-2_mt-off_space-other_MTS_seg-manual.json => sub-milan05_flip-2_mt-off_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-milan05/anat/{sub-milan05_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz => sub-milan05_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-milan05/anat/{sub-milan05_space-other_T1w_seg-manual.json => sub-milan05_space-other_T1w_label-SC_seg.json} (100%) rename derivatives/labels/sub-milan05/anat/{sub-milan05_space-other_T1w_seg-manual.nii.gz => sub-milan05_space-other_T1w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-milan05/anat/{sub-milan05_space-other_T1w_labels-disc-manual.json => sub-milan05_space-other_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-milan05/anat/{sub-milan05_space-other_T1w_labels-disc-manual.nii.gz => sub-milan05_space-other_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-milan05/anat/{sub-milan05_space-other_T2star_seg-manual.json => sub-milan05_space-other_T2star_label-SC_seg.json} (100%) rename derivatives/labels/sub-milan05/anat/{sub-milan05_space-other_T2star_seg-manual.nii.gz => sub-milan05_space-other_T2star_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-milan05/anat/{sub-milan05_space-other_T2w_seg-manual.json => sub-milan05_space-other_T2w_label-SC_seg.json} (100%) rename derivatives/labels/sub-milan05/anat/{sub-milan05_space-other_T2w_seg-manual.nii.gz => sub-milan05_space-other_T2w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-milan05/anat/{sub-milan05_space-other_T2w_labels-disc-manual.json => sub-milan05_space-other_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-milan05/anat/{sub-milan05_space-other_T2w_labels-disc-manual.nii.gz => sub-milan05_space-other_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-milan05/dwi/{sub-milan05_rec-average_dwi_seg-manual.json => sub-milan05_rec-average_dwi_label-SC_seg.json} (100%) rename derivatives/labels/sub-milan05/dwi/{sub-milan05_rec-average_dwi_seg-manual.nii.gz => sub-milan05_rec-average_dwi_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-milan06/anat/{sub-milan06_flip-1_mt-on_space-other_MTS_seg-manual.json => sub-milan06_flip-1_mt-on_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-milan06/anat/{sub-milan06_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz => sub-milan06_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-milan06/anat/{sub-milan06_flip-2_mt-off_space-other_MTS_seg-manual.json => sub-milan06_flip-2_mt-off_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-milan06/anat/{sub-milan06_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz => sub-milan06_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-milan06/anat/{sub-milan06_space-other_T1w_seg-manual.json => sub-milan06_space-other_T1w_label-SC_seg.json} (100%) rename derivatives/labels/sub-milan06/anat/{sub-milan06_space-other_T1w_seg-manual.nii.gz => sub-milan06_space-other_T1w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-milan06/anat/{sub-milan06_space-other_T1w_labels-disc-manual.json => sub-milan06_space-other_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-milan06/anat/{sub-milan06_space-other_T1w_labels-disc-manual.nii.gz => sub-milan06_space-other_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-milan06/anat/{sub-milan06_space-other_T2star_seg-manual.json => sub-milan06_space-other_T2star_label-SC_seg.json} (100%) rename derivatives/labels/sub-milan06/anat/{sub-milan06_space-other_T2star_seg-manual.nii.gz => sub-milan06_space-other_T2star_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-milan06/anat/{sub-milan06_space-other_T2w_seg-manual.json => sub-milan06_space-other_T2w_label-SC_seg.json} (100%) rename derivatives/labels/sub-milan06/anat/{sub-milan06_space-other_T2w_seg-manual.nii.gz => sub-milan06_space-other_T2w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-milan06/anat/{sub-milan06_space-other_T2w_labels-disc-manual.json => sub-milan06_space-other_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-milan06/anat/{sub-milan06_space-other_T2w_labels-disc-manual.nii.gz => sub-milan06_space-other_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-milan06/dwi/{sub-milan06_rec-average_dwi_seg-manual.json => sub-milan06_rec-average_dwi_label-SC_seg.json} (100%) rename derivatives/labels/sub-milan06/dwi/{sub-milan06_rec-average_dwi_seg-manual.nii.gz => sub-milan06_rec-average_dwi_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-milan07/anat/{sub-milan07_flip-1_mt-on_space-other_MTS_seg-manual.json => sub-milan07_flip-1_mt-on_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-milan07/anat/{sub-milan07_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz => sub-milan07_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-milan07/anat/{sub-milan07_flip-2_mt-off_space-other_MTS_seg-manual.json => sub-milan07_flip-2_mt-off_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-milan07/anat/{sub-milan07_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz => sub-milan07_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-milan07/anat/{sub-milan07_space-other_T1w_seg-manual.json => sub-milan07_space-other_T1w_label-SC_seg.json} (100%) rename derivatives/labels/sub-milan07/anat/{sub-milan07_space-other_T1w_seg-manual.nii.gz => sub-milan07_space-other_T1w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-milan07/anat/{sub-milan07_space-other_T1w_labels-disc-manual.json => sub-milan07_space-other_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-milan07/anat/{sub-milan07_space-other_T1w_labels-disc-manual.nii.gz => sub-milan07_space-other_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-milan07/anat/{sub-milan07_space-other_T2star_seg-manual.json => sub-milan07_space-other_T2star_label-SC_seg.json} (100%) rename derivatives/labels/sub-milan07/anat/{sub-milan07_space-other_T2star_seg-manual.nii.gz => sub-milan07_space-other_T2star_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-milan07/anat/{sub-milan07_space-other_T2w_seg-manual.json => sub-milan07_space-other_T2w_label-SC_seg.json} (100%) rename derivatives/labels/sub-milan07/anat/{sub-milan07_space-other_T2w_seg-manual.nii.gz => sub-milan07_space-other_T2w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-milan07/anat/{sub-milan07_space-other_T2w_labels-disc-manual.json => sub-milan07_space-other_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-milan07/anat/{sub-milan07_space-other_T2w_labels-disc-manual.nii.gz => sub-milan07_space-other_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-milan07/dwi/{sub-milan07_rec-average_dwi_seg-manual.json => sub-milan07_rec-average_dwi_label-SC_seg.json} (100%) rename derivatives/labels/sub-milan07/dwi/{sub-milan07_rec-average_dwi_seg-manual.nii.gz => sub-milan07_rec-average_dwi_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-mniPilot1/anat/{sub-mniPilot1_flip-1_mt-on_space-other_MTS_seg-manual.json => sub-mniPilot1_flip-1_mt-on_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-mniPilot1/anat/{sub-mniPilot1_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz => sub-mniPilot1_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-mniPilot1/anat/{sub-mniPilot1_flip-2_mt-off_space-other_MTS_seg-manual.json => sub-mniPilot1_flip-2_mt-off_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-mniPilot1/anat/{sub-mniPilot1_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz => sub-mniPilot1_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-mniPilot1/anat/{sub-mniPilot1_space-other_T1w_seg-manual.json => sub-mniPilot1_space-other_T1w_label-SC_seg.json} (100%) rename derivatives/labels/sub-mniPilot1/anat/{sub-mniPilot1_space-other_T1w_seg-manual.nii.gz => sub-mniPilot1_space-other_T1w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-mniPilot1/anat/{sub-mniPilot1_space-other_T1w_labels-disc-manual.json => sub-mniPilot1_space-other_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-mniPilot1/anat/{sub-mniPilot1_space-other_T1w_labels-disc-manual.nii.gz => sub-mniPilot1_space-other_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-mniPilot1/anat/{sub-mniPilot1_space-other_T2star_seg-manual.json => sub-mniPilot1_space-other_T2star_label-SC_seg.json} (100%) rename derivatives/labels/sub-mniPilot1/anat/{sub-mniPilot1_space-other_T2star_seg-manual.nii.gz => sub-mniPilot1_space-other_T2star_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-mniPilot1/anat/{sub-mniPilot1_space-other_T2w_seg-manual.json => sub-mniPilot1_space-other_T2w_label-SC_seg.json} (100%) rename derivatives/labels/sub-mniPilot1/anat/{sub-mniPilot1_space-other_T2w_seg-manual.nii.gz => sub-mniPilot1_space-other_T2w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-mniPilot1/anat/{sub-mniPilot1_space-other_T2w_labels-disc-manual.json => sub-mniPilot1_space-other_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-mniPilot1/anat/{sub-mniPilot1_space-other_T2w_labels-disc-manual.nii.gz => sub-mniPilot1_space-other_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-mniPilot1/dwi/{sub-mniPilot1_rec-average_dwi_seg-manual.json => sub-mniPilot1_rec-average_dwi_label-SC_seg.json} (100%) rename derivatives/labels/sub-mniPilot1/dwi/{sub-mniPilot1_rec-average_dwi_seg-manual.nii.gz => sub-mniPilot1_rec-average_dwi_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-mniS01/anat/{sub-mniS01_flip-1_mt-on_space-other_MTS_seg-manual.json => sub-mniS01_flip-1_mt-on_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-mniS01/anat/{sub-mniS01_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz => sub-mniS01_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-mniS01/anat/{sub-mniS01_flip-2_mt-off_space-other_MTS_seg-manual.json => sub-mniS01_flip-2_mt-off_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-mniS01/anat/{sub-mniS01_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz => sub-mniS01_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-mniS01/anat/{sub-mniS01_space-other_T1w_seg-manual.json => sub-mniS01_space-other_T1w_label-SC_seg.json} (100%) rename derivatives/labels/sub-mniS01/anat/{sub-mniS01_space-other_T1w_seg-manual.nii.gz => sub-mniS01_space-other_T1w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-mniS01/anat/{sub-mniS01_space-other_T1w_labels-disc-manual.json => sub-mniS01_space-other_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-mniS01/anat/{sub-mniS01_space-other_T1w_labels-disc-manual.nii.gz => sub-mniS01_space-other_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-mniS01/anat/{sub-mniS01_space-other_T2star_seg-manual.json => sub-mniS01_space-other_T2star_label-SC_seg.json} (100%) rename derivatives/labels/sub-mniS01/anat/{sub-mniS01_space-other_T2star_seg-manual.nii.gz => sub-mniS01_space-other_T2star_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-mniS01/anat/{sub-mniS01_space-other_T2w_seg-manual.json => sub-mniS01_space-other_T2w_label-SC_seg.json} (100%) rename derivatives/labels/sub-mniS01/anat/{sub-mniS01_space-other_T2w_seg-manual.nii.gz => sub-mniS01_space-other_T2w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-mniS01/anat/{sub-mniS01_space-other_T2w_labels-disc-manual.json => sub-mniS01_space-other_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-mniS01/anat/{sub-mniS01_space-other_T2w_labels-disc-manual.nii.gz => sub-mniS01_space-other_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-mniS01/dwi/{sub-mniS01_rec-average_dwi_seg-manual.json => sub-mniS01_rec-average_dwi_label-SC_seg.json} (100%) rename derivatives/labels/sub-mniS01/dwi/{sub-mniS01_rec-average_dwi_seg-manual.nii.gz => sub-mniS01_rec-average_dwi_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-mniS02/anat/{sub-mniS02_flip-1_mt-on_space-other_MTS_seg-manual.json => sub-mniS02_flip-1_mt-on_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-mniS02/anat/{sub-mniS02_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz => sub-mniS02_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-mniS02/anat/{sub-mniS02_flip-2_mt-off_space-other_MTS_seg-manual.json => sub-mniS02_flip-2_mt-off_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-mniS02/anat/{sub-mniS02_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz => sub-mniS02_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-mniS02/anat/{sub-mniS02_space-other_T1w_seg-manual.json => sub-mniS02_space-other_T1w_label-SC_seg.json} (100%) rename derivatives/labels/sub-mniS02/anat/{sub-mniS02_space-other_T1w_seg-manual.nii.gz => sub-mniS02_space-other_T1w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-mniS02/anat/{sub-mniS02_space-other_T1w_labels-disc-manual.json => sub-mniS02_space-other_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-mniS02/anat/{sub-mniS02_space-other_T1w_labels-disc-manual.nii.gz => sub-mniS02_space-other_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-mniS02/anat/{sub-mniS02_space-other_T2star_seg-manual.json => sub-mniS02_space-other_T2star_label-SC_seg.json} (100%) rename derivatives/labels/sub-mniS02/anat/{sub-mniS02_space-other_T2star_seg-manual.nii.gz => sub-mniS02_space-other_T2star_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-mniS02/anat/{sub-mniS02_space-other_T2w_seg-manual.json => sub-mniS02_space-other_T2w_label-SC_seg.json} (100%) rename derivatives/labels/sub-mniS02/anat/{sub-mniS02_space-other_T2w_seg-manual.nii.gz => sub-mniS02_space-other_T2w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-mniS02/anat/{sub-mniS02_space-other_T2w_labels-disc-manual.json => sub-mniS02_space-other_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-mniS02/anat/{sub-mniS02_space-other_T2w_labels-disc-manual.nii.gz => sub-mniS02_space-other_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-mniS02/dwi/{sub-mniS02_rec-average_dwi_seg-manual.json => sub-mniS02_rec-average_dwi_label-SC_seg.json} (100%) rename derivatives/labels/sub-mniS02/dwi/{sub-mniS02_rec-average_dwi_seg-manual.nii.gz => sub-mniS02_rec-average_dwi_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-mniS03/anat/{sub-mniS03_flip-1_mt-on_space-other_MTS_seg-manual.json => sub-mniS03_flip-1_mt-on_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-mniS03/anat/{sub-mniS03_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz => sub-mniS03_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-mniS03/anat/{sub-mniS03_flip-2_mt-off_space-other_MTS_seg-manual.json => sub-mniS03_flip-2_mt-off_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-mniS03/anat/{sub-mniS03_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz => sub-mniS03_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-mniS03/anat/{sub-mniS03_space-other_T1w_seg-manual.json => sub-mniS03_space-other_T1w_label-SC_seg.json} (100%) rename derivatives/labels/sub-mniS03/anat/{sub-mniS03_space-other_T1w_seg-manual.nii.gz => sub-mniS03_space-other_T1w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-mniS03/anat/{sub-mniS03_space-other_T1w_labels-disc-manual.json => sub-mniS03_space-other_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-mniS03/anat/{sub-mniS03_space-other_T1w_labels-disc-manual.nii.gz => sub-mniS03_space-other_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-mniS03/anat/{sub-mniS03_space-other_T2star_seg-manual.json => sub-mniS03_space-other_T2star_label-SC_seg.json} (100%) rename derivatives/labels/sub-mniS03/anat/{sub-mniS03_space-other_T2star_seg-manual.nii.gz => sub-mniS03_space-other_T2star_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-mniS03/anat/{sub-mniS03_space-other_T2w_seg-manual.json => sub-mniS03_space-other_T2w_label-SC_seg.json} (100%) rename derivatives/labels/sub-mniS03/anat/{sub-mniS03_space-other_T2w_seg-manual.nii.gz => sub-mniS03_space-other_T2w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-mniS03/anat/{sub-mniS03_space-other_T2w_labels-disc-manual.json => sub-mniS03_space-other_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-mniS03/anat/{sub-mniS03_space-other_T2w_labels-disc-manual.nii.gz => sub-mniS03_space-other_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-mniS03/dwi/{sub-mniS03_rec-average_dwi_seg-manual.json => sub-mniS03_rec-average_dwi_label-SC_seg.json} (100%) rename derivatives/labels/sub-mniS03/dwi/{sub-mniS03_rec-average_dwi_seg-manual.nii.gz => sub-mniS03_rec-average_dwi_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-mniS04/anat/{sub-mniS04_flip-1_mt-on_space-other_MTS_seg-manual.json => sub-mniS04_flip-1_mt-on_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-mniS04/anat/{sub-mniS04_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz => sub-mniS04_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-mniS04/anat/{sub-mniS04_flip-2_mt-off_space-other_MTS_seg-manual.json => sub-mniS04_flip-2_mt-off_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-mniS04/anat/{sub-mniS04_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz => sub-mniS04_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-mniS04/anat/{sub-mniS04_space-other_T1w_seg-manual.json => sub-mniS04_space-other_T1w_label-SC_seg.json} (100%) rename derivatives/labels/sub-mniS04/anat/{sub-mniS04_space-other_T1w_seg-manual.nii.gz => sub-mniS04_space-other_T1w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-mniS04/anat/{sub-mniS04_space-other_T1w_labels-disc-manual.json => sub-mniS04_space-other_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-mniS04/anat/{sub-mniS04_space-other_T1w_labels-disc-manual.nii.gz => sub-mniS04_space-other_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-mniS04/anat/{sub-mniS04_space-other_T2star_seg-manual.json => sub-mniS04_space-other_T2star_label-SC_seg.json} (100%) rename derivatives/labels/sub-mniS04/anat/{sub-mniS04_space-other_T2star_seg-manual.nii.gz => sub-mniS04_space-other_T2star_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-mniS04/anat/{sub-mniS04_space-other_T2w_seg-manual.json => sub-mniS04_space-other_T2w_label-SC_seg.json} (100%) rename derivatives/labels/sub-mniS04/anat/{sub-mniS04_space-other_T2w_seg-manual.nii.gz => sub-mniS04_space-other_T2w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-mniS04/anat/{sub-mniS04_space-other_T2w_labels-disc-manual.json => sub-mniS04_space-other_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-mniS04/anat/{sub-mniS04_space-other_T2w_labels-disc-manual.nii.gz => sub-mniS04_space-other_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-mniS04/dwi/{sub-mniS04_rec-average_dwi_seg-manual.json => sub-mniS04_rec-average_dwi_label-SC_seg.json} (100%) rename derivatives/labels/sub-mniS04/dwi/{sub-mniS04_rec-average_dwi_seg-manual.nii.gz => sub-mniS04_rec-average_dwi_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-mniS05/anat/{sub-mniS05_flip-1_mt-on_space-other_MTS_seg-manual.json => sub-mniS05_flip-1_mt-on_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-mniS05/anat/{sub-mniS05_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz => sub-mniS05_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-mniS05/anat/{sub-mniS05_flip-2_mt-off_space-other_MTS_seg-manual.json => sub-mniS05_flip-2_mt-off_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-mniS05/anat/{sub-mniS05_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz => sub-mniS05_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-mniS05/anat/{sub-mniS05_space-other_T1w_seg-manual.json => sub-mniS05_space-other_T1w_label-SC_seg.json} (100%) rename derivatives/labels/sub-mniS05/anat/{sub-mniS05_space-other_T1w_seg-manual.nii.gz => sub-mniS05_space-other_T1w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-mniS05/anat/{sub-mniS05_space-other_T1w_labels-disc-manual.json => sub-mniS05_space-other_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-mniS05/anat/{sub-mniS05_space-other_T1w_labels-disc-manual.nii.gz => sub-mniS05_space-other_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-mniS05/anat/{sub-mniS05_space-other_T2star_gmseg-manual.json => sub-mniS05_space-other_T2star_gmlabel-SC_seg.json} (100%) rename derivatives/labels/sub-mniS05/anat/{sub-mniS05_space-other_T2star_gmseg-manual.nii.gz => sub-mniS05_space-other_T2star_gmlabel-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-mniS05/anat/{sub-mniS05_space-other_T2star_seg-manual.json => sub-mniS05_space-other_T2star_label-SC_seg.json} (100%) rename derivatives/labels/sub-mniS05/anat/{sub-mniS05_space-other_T2star_seg-manual.nii.gz => sub-mniS05_space-other_T2star_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-mniS05/anat/{sub-mniS05_space-other_T2w_seg-manual.json => sub-mniS05_space-other_T2w_label-SC_seg.json} (100%) rename derivatives/labels/sub-mniS05/anat/{sub-mniS05_space-other_T2w_seg-manual.nii.gz => sub-mniS05_space-other_T2w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-mniS05/anat/{sub-mniS05_space-other_T2w_labels-disc-manual.json => sub-mniS05_space-other_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-mniS05/anat/{sub-mniS05_space-other_T2w_labels-disc-manual.nii.gz => sub-mniS05_space-other_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-mniS05/dwi/{sub-mniS05_rec-average_dwi_seg-manual.json => sub-mniS05_rec-average_dwi_label-SC_seg.json} (100%) rename derivatives/labels/sub-mniS05/dwi/{sub-mniS05_rec-average_dwi_seg-manual.nii.gz => sub-mniS05_rec-average_dwi_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-mniS06/anat/{sub-mniS06_flip-1_mt-on_space-other_MTS_seg-manual.json => sub-mniS06_flip-1_mt-on_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-mniS06/anat/{sub-mniS06_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz => sub-mniS06_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-mniS06/anat/{sub-mniS06_flip-2_mt-off_space-other_MTS_seg-manual.json => sub-mniS06_flip-2_mt-off_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-mniS06/anat/{sub-mniS06_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz => sub-mniS06_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-mniS06/anat/{sub-mniS06_space-other_T1w_seg-manual.json => sub-mniS06_space-other_T1w_label-SC_seg.json} (100%) rename derivatives/labels/sub-mniS06/anat/{sub-mniS06_space-other_T1w_seg-manual.nii.gz => sub-mniS06_space-other_T1w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-mniS06/anat/{sub-mniS06_space-other_T1w_labels-disc-manual.json => sub-mniS06_space-other_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-mniS06/anat/{sub-mniS06_space-other_T1w_labels-disc-manual.nii.gz => sub-mniS06_space-other_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-mniS06/anat/{sub-mniS06_space-other_T2star_seg-manual.json => sub-mniS06_space-other_T2star_label-SC_seg.json} (100%) rename derivatives/labels/sub-mniS06/anat/{sub-mniS06_space-other_T2star_seg-manual.nii.gz => sub-mniS06_space-other_T2star_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-mniS06/anat/{sub-mniS06_space-other_T2w_seg-manual.json => sub-mniS06_space-other_T2w_label-SC_seg.json} (100%) rename derivatives/labels/sub-mniS06/anat/{sub-mniS06_space-other_T2w_seg-manual.nii.gz => sub-mniS06_space-other_T2w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-mniS06/anat/{sub-mniS06_space-other_T2w_labels-disc-manual.json => sub-mniS06_space-other_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-mniS06/anat/{sub-mniS06_space-other_T2w_labels-disc-manual.nii.gz => sub-mniS06_space-other_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-mniS06/dwi/{sub-mniS06_rec-average_dwi_seg-manual.json => sub-mniS06_rec-average_dwi_label-SC_seg.json} (100%) rename derivatives/labels/sub-mniS06/dwi/{sub-mniS06_rec-average_dwi_seg-manual.nii.gz => sub-mniS06_rec-average_dwi_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-mniS07/anat/{sub-mniS07_flip-1_mt-on_space-other_MTS_seg-manual.json => sub-mniS07_flip-1_mt-on_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-mniS07/anat/{sub-mniS07_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz => sub-mniS07_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-mniS07/anat/{sub-mniS07_flip-2_mt-off_space-other_MTS_seg-manual.json => sub-mniS07_flip-2_mt-off_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-mniS07/anat/{sub-mniS07_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz => sub-mniS07_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-mniS07/anat/{sub-mniS07_space-other_T1w_seg-manual.json => sub-mniS07_space-other_T1w_label-SC_seg.json} (100%) rename derivatives/labels/sub-mniS07/anat/{sub-mniS07_space-other_T1w_seg-manual.nii.gz => sub-mniS07_space-other_T1w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-mniS07/anat/{sub-mniS07_space-other_T1w_labels-disc-manual.json => sub-mniS07_space-other_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-mniS07/anat/{sub-mniS07_space-other_T1w_labels-disc-manual.nii.gz => sub-mniS07_space-other_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-mniS07/anat/{sub-mniS07_space-other_T2star_seg-manual.json => sub-mniS07_space-other_T2star_label-SC_seg.json} (100%) rename derivatives/labels/sub-mniS07/anat/{sub-mniS07_space-other_T2star_seg-manual.nii.gz => sub-mniS07_space-other_T2star_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-mniS07/anat/{sub-mniS07_space-other_T2w_seg-manual.json => sub-mniS07_space-other_T2w_label-SC_seg.json} (100%) rename derivatives/labels/sub-mniS07/anat/{sub-mniS07_space-other_T2w_seg-manual.nii.gz => sub-mniS07_space-other_T2w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-mniS07/anat/{sub-mniS07_space-other_T2w_labels-disc-manual.json => sub-mniS07_space-other_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-mniS07/anat/{sub-mniS07_space-other_T2w_labels-disc-manual.nii.gz => sub-mniS07_space-other_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-mniS07/dwi/{sub-mniS07_rec-average_dwi_seg-manual.json => sub-mniS07_rec-average_dwi_label-SC_seg.json} (100%) rename derivatives/labels/sub-mniS07/dwi/{sub-mniS07_rec-average_dwi_seg-manual.nii.gz => sub-mniS07_rec-average_dwi_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-mniS08/anat/{sub-mniS08_flip-1_mt-on_space-other_MTS_seg-manual.json => sub-mniS08_flip-1_mt-on_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-mniS08/anat/{sub-mniS08_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz => sub-mniS08_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-mniS08/anat/{sub-mniS08_flip-2_mt-off_space-other_MTS_seg-manual.json => sub-mniS08_flip-2_mt-off_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-mniS08/anat/{sub-mniS08_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz => sub-mniS08_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-mniS08/anat/{sub-mniS08_space-other_T1w_seg-manual.json => sub-mniS08_space-other_T1w_label-SC_seg.json} (100%) rename derivatives/labels/sub-mniS08/anat/{sub-mniS08_space-other_T1w_seg-manual.nii.gz => sub-mniS08_space-other_T1w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-mniS08/anat/{sub-mniS08_space-other_T1w_labels-disc-manual.json => sub-mniS08_space-other_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-mniS08/anat/{sub-mniS08_space-other_T1w_labels-disc-manual.nii.gz => sub-mniS08_space-other_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-mniS08/anat/{sub-mniS08_space-other_T2star_seg-manual.json => sub-mniS08_space-other_T2star_label-SC_seg.json} (100%) rename derivatives/labels/sub-mniS08/anat/{sub-mniS08_space-other_T2star_seg-manual.nii.gz => sub-mniS08_space-other_T2star_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-mniS08/anat/{sub-mniS08_space-other_T2w_seg-manual.json => sub-mniS08_space-other_T2w_label-SC_seg.json} (100%) rename derivatives/labels/sub-mniS08/anat/{sub-mniS08_space-other_T2w_seg-manual.nii.gz => sub-mniS08_space-other_T2w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-mniS08/anat/{sub-mniS08_space-other_T2w_labels-disc-manual.json => sub-mniS08_space-other_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-mniS08/anat/{sub-mniS08_space-other_T2w_labels-disc-manual.nii.gz => sub-mniS08_space-other_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-mniS08/dwi/{sub-mniS08_rec-average_dwi_seg-manual.json => sub-mniS08_rec-average_dwi_label-SC_seg.json} (100%) rename derivatives/labels/sub-mniS08/dwi/{sub-mniS08_rec-average_dwi_seg-manual.nii.gz => sub-mniS08_rec-average_dwi_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-mniS09/anat/{sub-mniS09_flip-1_mt-on_space-other_MTS_seg-manual.json => sub-mniS09_flip-1_mt-on_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-mniS09/anat/{sub-mniS09_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz => sub-mniS09_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-mniS09/anat/{sub-mniS09_flip-2_mt-off_space-other_MTS_seg-manual.json => sub-mniS09_flip-2_mt-off_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-mniS09/anat/{sub-mniS09_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz => sub-mniS09_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-mniS09/anat/{sub-mniS09_space-other_T1w_seg-manual.json => sub-mniS09_space-other_T1w_label-SC_seg.json} (100%) rename derivatives/labels/sub-mniS09/anat/{sub-mniS09_space-other_T1w_seg-manual.nii.gz => sub-mniS09_space-other_T1w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-mniS09/anat/{sub-mniS09_space-other_T1w_labels-disc-manual.json => sub-mniS09_space-other_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-mniS09/anat/{sub-mniS09_space-other_T1w_labels-disc-manual.nii.gz => sub-mniS09_space-other_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-mniS09/anat/{sub-mniS09_space-other_T2star_seg-manual.json => sub-mniS09_space-other_T2star_label-SC_seg.json} (100%) rename derivatives/labels/sub-mniS09/anat/{sub-mniS09_space-other_T2star_seg-manual.nii.gz => sub-mniS09_space-other_T2star_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-mniS09/anat/{sub-mniS09_space-other_T2w_seg-manual.json => sub-mniS09_space-other_T2w_label-SC_seg.json} (100%) rename derivatives/labels/sub-mniS09/anat/{sub-mniS09_space-other_T2w_seg-manual.nii.gz => sub-mniS09_space-other_T2w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-mniS09/anat/{sub-mniS09_space-other_T2w_labels-disc-manual.json => sub-mniS09_space-other_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-mniS09/anat/{sub-mniS09_space-other_T2w_labels-disc-manual.nii.gz => sub-mniS09_space-other_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-mniS09/dwi/{sub-mniS09_rec-average_dwi_seg-manual.json => sub-mniS09_rec-average_dwi_label-SC_seg.json} (100%) rename derivatives/labels/sub-mniS09/dwi/{sub-mniS09_rec-average_dwi_seg-manual.nii.gz => sub-mniS09_rec-average_dwi_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-mountSinai01/anat/{sub-mountSinai01_flip-1_mt-on_space-other_MTS_seg-manual.json => sub-mountSinai01_flip-1_mt-on_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-mountSinai01/anat/{sub-mountSinai01_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz => sub-mountSinai01_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-mountSinai01/anat/{sub-mountSinai01_flip-2_mt-off_space-other_MTS_seg-manual.json => sub-mountSinai01_flip-2_mt-off_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-mountSinai01/anat/{sub-mountSinai01_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz => sub-mountSinai01_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-mountSinai01/anat/{sub-mountSinai01_space-other_T1w_seg-manual.json => sub-mountSinai01_space-other_T1w_label-SC_seg.json} (100%) rename derivatives/labels/sub-mountSinai01/anat/{sub-mountSinai01_space-other_T1w_seg-manual.nii.gz => sub-mountSinai01_space-other_T1w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-mountSinai01/anat/{sub-mountSinai01_space-other_T1w_labels-disc-manual.json => sub-mountSinai01_space-other_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-mountSinai01/anat/{sub-mountSinai01_space-other_T1w_labels-disc-manual.nii.gz => sub-mountSinai01_space-other_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-mountSinai01/anat/{sub-mountSinai01_space-other_T2star_seg-manual.json => sub-mountSinai01_space-other_T2star_label-SC_seg.json} (100%) rename derivatives/labels/sub-mountSinai01/anat/{sub-mountSinai01_space-other_T2star_seg-manual.nii.gz => sub-mountSinai01_space-other_T2star_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-mountSinai01/anat/{sub-mountSinai01_space-other_T2w_seg-manual.json => sub-mountSinai01_space-other_T2w_label-SC_seg.json} (100%) rename derivatives/labels/sub-mountSinai01/anat/{sub-mountSinai01_space-other_T2w_seg-manual.nii.gz => sub-mountSinai01_space-other_T2w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-mountSinai01/anat/{sub-mountSinai01_space-other_T2w_labels-disc-manual.json => sub-mountSinai01_space-other_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-mountSinai01/anat/{sub-mountSinai01_space-other_T2w_labels-disc-manual.nii.gz => sub-mountSinai01_space-other_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-mountSinai01/dwi/{sub-mountSinai01_rec-average_dwi_seg-manual.json => sub-mountSinai01_rec-average_dwi_label-SC_seg.json} (100%) rename derivatives/labels/sub-mountSinai01/dwi/{sub-mountSinai01_rec-average_dwi_seg-manual.nii.gz => sub-mountSinai01_rec-average_dwi_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-mountSinai02/anat/{sub-mountSinai02_flip-1_mt-on_space-other_MTS_seg-manual.json => sub-mountSinai02_flip-1_mt-on_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-mountSinai02/anat/{sub-mountSinai02_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz => sub-mountSinai02_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-mountSinai02/anat/{sub-mountSinai02_flip-2_mt-off_space-other_MTS_seg-manual.json => sub-mountSinai02_flip-2_mt-off_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-mountSinai02/anat/{sub-mountSinai02_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz => sub-mountSinai02_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-mountSinai02/anat/{sub-mountSinai02_space-other_T1w_seg-manual.json => sub-mountSinai02_space-other_T1w_label-SC_seg.json} (100%) rename derivatives/labels/sub-mountSinai02/anat/{sub-mountSinai02_space-other_T1w_seg-manual.nii.gz => sub-mountSinai02_space-other_T1w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-mountSinai02/anat/{sub-mountSinai02_space-other_T1w_labels-disc-manual.json => sub-mountSinai02_space-other_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-mountSinai02/anat/{sub-mountSinai02_space-other_T1w_labels-disc-manual.nii.gz => sub-mountSinai02_space-other_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-mountSinai02/anat/{sub-mountSinai02_space-other_T2star_seg-manual.json => sub-mountSinai02_space-other_T2star_label-SC_seg.json} (100%) rename derivatives/labels/sub-mountSinai02/anat/{sub-mountSinai02_space-other_T2star_seg-manual.nii.gz => sub-mountSinai02_space-other_T2star_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-mountSinai02/anat/{sub-mountSinai02_space-other_T2w_seg-manual.json => sub-mountSinai02_space-other_T2w_label-SC_seg.json} (100%) rename derivatives/labels/sub-mountSinai02/anat/{sub-mountSinai02_space-other_T2w_seg-manual.nii.gz => sub-mountSinai02_space-other_T2w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-mountSinai02/anat/{sub-mountSinai02_space-other_T2w_labels-disc-manual.json => sub-mountSinai02_space-other_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-mountSinai02/anat/{sub-mountSinai02_space-other_T2w_labels-disc-manual.nii.gz => sub-mountSinai02_space-other_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-mountSinai02/dwi/{sub-mountSinai02_rec-average_dwi_seg-manual.json => sub-mountSinai02_rec-average_dwi_label-SC_seg.json} (100%) rename derivatives/labels/sub-mountSinai02/dwi/{sub-mountSinai02_rec-average_dwi_seg-manual.nii.gz => sub-mountSinai02_rec-average_dwi_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-mountSinai03/anat/{sub-mountSinai03_flip-1_mt-on_space-other_MTS_seg-manual.json => sub-mountSinai03_flip-1_mt-on_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-mountSinai03/anat/{sub-mountSinai03_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz => sub-mountSinai03_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-mountSinai03/anat/{sub-mountSinai03_flip-2_mt-off_space-other_MTS_seg-manual.json => sub-mountSinai03_flip-2_mt-off_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-mountSinai03/anat/{sub-mountSinai03_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz => sub-mountSinai03_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-mountSinai03/anat/{sub-mountSinai03_space-other_T1w_seg-manual.json => sub-mountSinai03_space-other_T1w_label-SC_seg.json} (100%) rename derivatives/labels/sub-mountSinai03/anat/{sub-mountSinai03_space-other_T1w_seg-manual.nii.gz => sub-mountSinai03_space-other_T1w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-mountSinai03/anat/{sub-mountSinai03_space-other_T1w_labels-disc-manual.json => sub-mountSinai03_space-other_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-mountSinai03/anat/{sub-mountSinai03_space-other_T1w_labels-disc-manual.nii.gz => sub-mountSinai03_space-other_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-mountSinai03/anat/{sub-mountSinai03_space-other_T2star_seg-manual.json => sub-mountSinai03_space-other_T2star_label-SC_seg.json} (100%) rename derivatives/labels/sub-mountSinai03/anat/{sub-mountSinai03_space-other_T2star_seg-manual.nii.gz => sub-mountSinai03_space-other_T2star_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-mountSinai03/anat/{sub-mountSinai03_space-other_T2w_seg-manual.json => sub-mountSinai03_space-other_T2w_label-SC_seg.json} (100%) rename derivatives/labels/sub-mountSinai03/anat/{sub-mountSinai03_space-other_T2w_seg-manual.nii.gz => sub-mountSinai03_space-other_T2w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-mountSinai03/anat/{sub-mountSinai03_space-other_T2w_labels-disc-manual.json => sub-mountSinai03_space-other_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-mountSinai03/anat/{sub-mountSinai03_space-other_T2w_labels-disc-manual.nii.gz => sub-mountSinai03_space-other_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-mountSinai03/dwi/{sub-mountSinai03_rec-average_dwi_seg-manual.json => sub-mountSinai03_rec-average_dwi_label-SC_seg.json} (100%) rename derivatives/labels/sub-mountSinai03/dwi/{sub-mountSinai03_rec-average_dwi_seg-manual.nii.gz => sub-mountSinai03_rec-average_dwi_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-mountSinai04/anat/{sub-mountSinai04_flip-1_mt-on_space-other_MTS_seg-manual.json => sub-mountSinai04_flip-1_mt-on_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-mountSinai04/anat/{sub-mountSinai04_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz => sub-mountSinai04_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-mountSinai04/anat/{sub-mountSinai04_flip-2_mt-off_space-other_MTS_seg-manual.json => sub-mountSinai04_flip-2_mt-off_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-mountSinai04/anat/{sub-mountSinai04_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz => sub-mountSinai04_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-mountSinai04/anat/{sub-mountSinai04_space-other_T1w_seg-manual.json => sub-mountSinai04_space-other_T1w_label-SC_seg.json} (100%) rename derivatives/labels/sub-mountSinai04/anat/{sub-mountSinai04_space-other_T1w_seg-manual.nii.gz => sub-mountSinai04_space-other_T1w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-mountSinai04/anat/{sub-mountSinai04_space-other_T1w_labels-disc-manual.json => sub-mountSinai04_space-other_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-mountSinai04/anat/{sub-mountSinai04_space-other_T1w_labels-disc-manual.nii.gz => sub-mountSinai04_space-other_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-mountSinai04/anat/{sub-mountSinai04_space-other_T2star_seg-manual.json => sub-mountSinai04_space-other_T2star_label-SC_seg.json} (100%) rename derivatives/labels/sub-mountSinai04/anat/{sub-mountSinai04_space-other_T2star_seg-manual.nii.gz => sub-mountSinai04_space-other_T2star_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-mountSinai04/anat/{sub-mountSinai04_space-other_T2w_seg-manual.json => sub-mountSinai04_space-other_T2w_label-SC_seg.json} (100%) rename derivatives/labels/sub-mountSinai04/anat/{sub-mountSinai04_space-other_T2w_seg-manual.nii.gz => sub-mountSinai04_space-other_T2w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-mountSinai04/anat/{sub-mountSinai04_space-other_T2w_labels-disc-manual.json => sub-mountSinai04_space-other_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-mountSinai04/anat/{sub-mountSinai04_space-other_T2w_labels-disc-manual.nii.gz => sub-mountSinai04_space-other_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-mountSinai04/dwi/{sub-mountSinai04_rec-average_dwi_seg-manual.json => sub-mountSinai04_rec-average_dwi_label-SC_seg.json} (100%) rename derivatives/labels/sub-mountSinai04/dwi/{sub-mountSinai04_rec-average_dwi_seg-manual.nii.gz => sub-mountSinai04_rec-average_dwi_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-mountSinai05/anat/{sub-mountSinai05_flip-1_mt-on_space-other_MTS_seg-manual.json => sub-mountSinai05_flip-1_mt-on_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-mountSinai05/anat/{sub-mountSinai05_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz => sub-mountSinai05_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-mountSinai05/anat/{sub-mountSinai05_flip-2_mt-off_space-other_MTS_seg-manual.json => sub-mountSinai05_flip-2_mt-off_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-mountSinai05/anat/{sub-mountSinai05_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz => sub-mountSinai05_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-mountSinai05/anat/{sub-mountSinai05_space-other_T1w_seg-manual.json => sub-mountSinai05_space-other_T1w_label-SC_seg.json} (100%) rename derivatives/labels/sub-mountSinai05/anat/{sub-mountSinai05_space-other_T1w_seg-manual.nii.gz => sub-mountSinai05_space-other_T1w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-mountSinai05/anat/{sub-mountSinai05_space-other_T1w_labels-disc-manual.json => sub-mountSinai05_space-other_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-mountSinai05/anat/{sub-mountSinai05_space-other_T1w_labels-disc-manual.nii.gz => sub-mountSinai05_space-other_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-mountSinai05/anat/{sub-mountSinai05_space-other_T2star_seg-manual.json => sub-mountSinai05_space-other_T2star_label-SC_seg.json} (100%) rename derivatives/labels/sub-mountSinai05/anat/{sub-mountSinai05_space-other_T2star_seg-manual.nii.gz => sub-mountSinai05_space-other_T2star_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-mountSinai05/anat/{sub-mountSinai05_space-other_T2w_seg-manual.json => sub-mountSinai05_space-other_T2w_label-SC_seg.json} (100%) rename derivatives/labels/sub-mountSinai05/anat/{sub-mountSinai05_space-other_T2w_seg-manual.nii.gz => sub-mountSinai05_space-other_T2w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-mountSinai05/anat/{sub-mountSinai05_space-other_T2w_labels-disc-manual.json => sub-mountSinai05_space-other_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-mountSinai05/anat/{sub-mountSinai05_space-other_T2w_labels-disc-manual.nii.gz => sub-mountSinai05_space-other_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-mountSinai05/dwi/{sub-mountSinai05_rec-average_dwi_seg-manual.json => sub-mountSinai05_rec-average_dwi_label-SC_seg.json} (100%) rename derivatives/labels/sub-mountSinai05/dwi/{sub-mountSinai05_rec-average_dwi_seg-manual.nii.gz => sub-mountSinai05_rec-average_dwi_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-mountSinai06/anat/{sub-mountSinai06_flip-1_mt-on_space-other_MTS_seg-manual.json => sub-mountSinai06_flip-1_mt-on_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-mountSinai06/anat/{sub-mountSinai06_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz => sub-mountSinai06_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-mountSinai06/anat/{sub-mountSinai06_flip-2_mt-off_space-other_MTS_seg-manual.json => sub-mountSinai06_flip-2_mt-off_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-mountSinai06/anat/{sub-mountSinai06_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz => sub-mountSinai06_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-mountSinai06/anat/{sub-mountSinai06_space-other_T1w_seg-manual.json => sub-mountSinai06_space-other_T1w_label-SC_seg.json} (100%) rename derivatives/labels/sub-mountSinai06/anat/{sub-mountSinai06_space-other_T1w_seg-manual.nii.gz => sub-mountSinai06_space-other_T1w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-mountSinai06/anat/{sub-mountSinai06_space-other_T1w_labels-disc-manual.json => sub-mountSinai06_space-other_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-mountSinai06/anat/{sub-mountSinai06_space-other_T1w_labels-disc-manual.nii.gz => sub-mountSinai06_space-other_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-mountSinai06/anat/{sub-mountSinai06_space-other_T2star_seg-manual.json => sub-mountSinai06_space-other_T2star_label-SC_seg.json} (100%) rename derivatives/labels/sub-mountSinai06/anat/{sub-mountSinai06_space-other_T2star_seg-manual.nii.gz => sub-mountSinai06_space-other_T2star_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-mountSinai06/anat/{sub-mountSinai06_space-other_T2w_seg-manual.json => sub-mountSinai06_space-other_T2w_label-SC_seg.json} (100%) rename derivatives/labels/sub-mountSinai06/anat/{sub-mountSinai06_space-other_T2w_seg-manual.nii.gz => sub-mountSinai06_space-other_T2w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-mountSinai06/anat/{sub-mountSinai06_space-other_T2w_labels-disc-manual.json => sub-mountSinai06_space-other_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-mountSinai06/anat/{sub-mountSinai06_space-other_T2w_labels-disc-manual.nii.gz => sub-mountSinai06_space-other_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-mountSinai06/dwi/{sub-mountSinai06_rec-average_dwi_seg-manual.json => sub-mountSinai06_rec-average_dwi_label-SC_seg.json} (100%) rename derivatives/labels/sub-mountSinai06/dwi/{sub-mountSinai06_rec-average_dwi_seg-manual.nii.gz => sub-mountSinai06_rec-average_dwi_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-mpicbs01/anat/{sub-mpicbs01_flip-1_mt-on_space-other_MTS_seg-manual.json => sub-mpicbs01_flip-1_mt-on_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-mpicbs01/anat/{sub-mpicbs01_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz => sub-mpicbs01_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-mpicbs01/anat/{sub-mpicbs01_flip-2_mt-off_space-other_MTS_seg-manual.json => sub-mpicbs01_flip-2_mt-off_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-mpicbs01/anat/{sub-mpicbs01_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz => sub-mpicbs01_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-mpicbs01/anat/{sub-mpicbs01_space-other_T1w_seg-manual.json => sub-mpicbs01_space-other_T1w_label-SC_seg.json} (100%) rename derivatives/labels/sub-mpicbs01/anat/{sub-mpicbs01_space-other_T1w_seg-manual.nii.gz => sub-mpicbs01_space-other_T1w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-mpicbs01/anat/{sub-mpicbs01_space-other_T1w_labels-disc-manual.json => sub-mpicbs01_space-other_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-mpicbs01/anat/{sub-mpicbs01_space-other_T1w_labels-disc-manual.nii.gz => sub-mpicbs01_space-other_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-mpicbs01/anat/{sub-mpicbs01_space-other_T2star_seg-manual.json => sub-mpicbs01_space-other_T2star_label-SC_seg.json} (100%) rename derivatives/labels/sub-mpicbs01/anat/{sub-mpicbs01_space-other_T2star_seg-manual.nii.gz => sub-mpicbs01_space-other_T2star_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-mpicbs01/anat/{sub-mpicbs01_space-other_T2w_seg-manual.json => sub-mpicbs01_space-other_T2w_label-SC_seg.json} (100%) rename derivatives/labels/sub-mpicbs01/anat/{sub-mpicbs01_space-other_T2w_seg-manual.nii.gz => sub-mpicbs01_space-other_T2w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-mpicbs01/anat/{sub-mpicbs01_space-other_T2w_labels-disc-manual.json => sub-mpicbs01_space-other_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-mpicbs01/anat/{sub-mpicbs01_space-other_T2w_labels-disc-manual.nii.gz => sub-mpicbs01_space-other_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-mpicbs01/dwi/{sub-mpicbs01_rec-average_dwi_seg-manual.json => sub-mpicbs01_rec-average_dwi_label-SC_seg.json} (100%) rename derivatives/labels/sub-mpicbs01/dwi/{sub-mpicbs01_rec-average_dwi_seg-manual.nii.gz => sub-mpicbs01_rec-average_dwi_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-mpicbs02/anat/{sub-mpicbs02_flip-1_mt-on_space-other_MTS_seg-manual.json => sub-mpicbs02_flip-1_mt-on_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-mpicbs02/anat/{sub-mpicbs02_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz => sub-mpicbs02_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-mpicbs02/anat/{sub-mpicbs02_flip-2_mt-off_space-other_MTS_seg-manual.json => sub-mpicbs02_flip-2_mt-off_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-mpicbs02/anat/{sub-mpicbs02_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz => sub-mpicbs02_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-mpicbs02/anat/{sub-mpicbs02_space-other_T1w_seg-manual.json => sub-mpicbs02_space-other_T1w_label-SC_seg.json} (100%) rename derivatives/labels/sub-mpicbs02/anat/{sub-mpicbs02_space-other_T1w_seg-manual.nii.gz => sub-mpicbs02_space-other_T1w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-mpicbs02/anat/{sub-mpicbs02_space-other_T1w_labels-disc-manual.json => sub-mpicbs02_space-other_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-mpicbs02/anat/{sub-mpicbs02_space-other_T1w_labels-disc-manual.nii.gz => sub-mpicbs02_space-other_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-mpicbs02/anat/{sub-mpicbs02_space-other_T2star_seg-manual.json => sub-mpicbs02_space-other_T2star_label-SC_seg.json} (100%) rename derivatives/labels/sub-mpicbs02/anat/{sub-mpicbs02_space-other_T2star_seg-manual.nii.gz => sub-mpicbs02_space-other_T2star_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-mpicbs02/anat/{sub-mpicbs02_space-other_T2w_seg-manual.json => sub-mpicbs02_space-other_T2w_label-SC_seg.json} (100%) rename derivatives/labels/sub-mpicbs02/anat/{sub-mpicbs02_space-other_T2w_seg-manual.nii.gz => sub-mpicbs02_space-other_T2w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-mpicbs02/anat/{sub-mpicbs02_space-other_T2w_labels-disc-manual.json => sub-mpicbs02_space-other_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-mpicbs02/anat/{sub-mpicbs02_space-other_T2w_labels-disc-manual.nii.gz => sub-mpicbs02_space-other_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-mpicbs02/dwi/{sub-mpicbs02_rec-average_dwi_seg-manual.json => sub-mpicbs02_rec-average_dwi_label-SC_seg.json} (100%) rename derivatives/labels/sub-mpicbs02/dwi/{sub-mpicbs02_rec-average_dwi_seg-manual.nii.gz => sub-mpicbs02_rec-average_dwi_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-mpicbs03/anat/{sub-mpicbs03_flip-1_mt-on_space-other_MTS_seg-manual.json => sub-mpicbs03_flip-1_mt-on_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-mpicbs03/anat/{sub-mpicbs03_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz => sub-mpicbs03_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-mpicbs03/anat/{sub-mpicbs03_flip-2_mt-off_space-other_MTS_seg-manual.json => sub-mpicbs03_flip-2_mt-off_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-mpicbs03/anat/{sub-mpicbs03_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz => sub-mpicbs03_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-mpicbs03/anat/{sub-mpicbs03_space-other_T1w_seg-manual.json => sub-mpicbs03_space-other_T1w_label-SC_seg.json} (100%) rename derivatives/labels/sub-mpicbs03/anat/{sub-mpicbs03_space-other_T1w_seg-manual.nii.gz => sub-mpicbs03_space-other_T1w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-mpicbs03/anat/{sub-mpicbs03_space-other_T1w_labels-disc-manual.json => sub-mpicbs03_space-other_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-mpicbs03/anat/{sub-mpicbs03_space-other_T1w_labels-disc-manual.nii.gz => sub-mpicbs03_space-other_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-mpicbs03/anat/{sub-mpicbs03_space-other_T2star_seg-manual.json => sub-mpicbs03_space-other_T2star_label-SC_seg.json} (100%) rename derivatives/labels/sub-mpicbs03/anat/{sub-mpicbs03_space-other_T2star_seg-manual.nii.gz => sub-mpicbs03_space-other_T2star_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-mpicbs03/anat/{sub-mpicbs03_space-other_T2w_seg-manual.json => sub-mpicbs03_space-other_T2w_label-SC_seg.json} (100%) rename derivatives/labels/sub-mpicbs03/anat/{sub-mpicbs03_space-other_T2w_seg-manual.nii.gz => sub-mpicbs03_space-other_T2w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-mpicbs03/anat/{sub-mpicbs03_space-other_T2w_labels-disc-manual.json => sub-mpicbs03_space-other_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-mpicbs03/anat/{sub-mpicbs03_space-other_T2w_labels-disc-manual.nii.gz => sub-mpicbs03_space-other_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-mpicbs03/dwi/{sub-mpicbs03_rec-average_dwi_seg-manual.json => sub-mpicbs03_rec-average_dwi_label-SC_seg.json} (100%) rename derivatives/labels/sub-mpicbs03/dwi/{sub-mpicbs03_rec-average_dwi_seg-manual.nii.gz => sub-mpicbs03_rec-average_dwi_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-mpicbs05/anat/{sub-mpicbs05_flip-1_mt-on_space-other_MTS_seg-manual.json => sub-mpicbs05_flip-1_mt-on_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-mpicbs05/anat/{sub-mpicbs05_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz => sub-mpicbs05_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-mpicbs05/anat/{sub-mpicbs05_flip-2_mt-off_space-other_MTS_seg-manual.json => sub-mpicbs05_flip-2_mt-off_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-mpicbs05/anat/{sub-mpicbs05_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz => sub-mpicbs05_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-mpicbs05/anat/{sub-mpicbs05_space-other_T1w_seg-manual.json => sub-mpicbs05_space-other_T1w_label-SC_seg.json} (100%) rename derivatives/labels/sub-mpicbs05/anat/{sub-mpicbs05_space-other_T1w_seg-manual.nii.gz => sub-mpicbs05_space-other_T1w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-mpicbs05/anat/{sub-mpicbs05_space-other_T1w_labels-disc-manual.json => sub-mpicbs05_space-other_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-mpicbs05/anat/{sub-mpicbs05_space-other_T1w_labels-disc-manual.nii.gz => sub-mpicbs05_space-other_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-mpicbs05/anat/{sub-mpicbs05_space-other_T2star_seg-manual.json => sub-mpicbs05_space-other_T2star_label-SC_seg.json} (100%) rename derivatives/labels/sub-mpicbs05/anat/{sub-mpicbs05_space-other_T2star_seg-manual.nii.gz => sub-mpicbs05_space-other_T2star_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-mpicbs05/anat/{sub-mpicbs05_space-other_T2w_seg-manual.json => sub-mpicbs05_space-other_T2w_label-SC_seg.json} (100%) rename derivatives/labels/sub-mpicbs05/anat/{sub-mpicbs05_space-other_T2w_seg-manual.nii.gz => sub-mpicbs05_space-other_T2w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-mpicbs05/anat/{sub-mpicbs05_space-other_T2w_labels-disc-manual.json => sub-mpicbs05_space-other_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-mpicbs05/anat/{sub-mpicbs05_space-other_T2w_labels-disc-manual.nii.gz => sub-mpicbs05_space-other_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-mpicbs05/dwi/{sub-mpicbs05_rec-average_dwi_seg-manual.json => sub-mpicbs05_rec-average_dwi_label-SC_seg.json} (100%) rename derivatives/labels/sub-mpicbs05/dwi/{sub-mpicbs05_rec-average_dwi_seg-manual.nii.gz => sub-mpicbs05_rec-average_dwi_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-mpicbs06/anat/{sub-mpicbs06_flip-1_mt-on_space-other_MTS_seg-manual.json => sub-mpicbs06_flip-1_mt-on_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-mpicbs06/anat/{sub-mpicbs06_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz => sub-mpicbs06_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-mpicbs06/anat/{sub-mpicbs06_flip-2_mt-off_space-other_MTS_seg-manual.json => sub-mpicbs06_flip-2_mt-off_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-mpicbs06/anat/{sub-mpicbs06_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz => sub-mpicbs06_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-mpicbs06/anat/{sub-mpicbs06_space-other_T1w_seg-manual.json => sub-mpicbs06_space-other_T1w_label-SC_seg.json} (100%) rename derivatives/labels/sub-mpicbs06/anat/{sub-mpicbs06_space-other_T1w_seg-manual.nii.gz => sub-mpicbs06_space-other_T1w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-mpicbs06/anat/{sub-mpicbs06_space-other_T1w_labels-disc-manual.json => sub-mpicbs06_space-other_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-mpicbs06/anat/{sub-mpicbs06_space-other_T1w_labels-disc-manual.nii.gz => sub-mpicbs06_space-other_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-mpicbs06/anat/{sub-mpicbs06_space-other_T2star_seg-manual.json => sub-mpicbs06_space-other_T2star_label-SC_seg.json} (100%) rename derivatives/labels/sub-mpicbs06/anat/{sub-mpicbs06_space-other_T2star_seg-manual.nii.gz => sub-mpicbs06_space-other_T2star_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-mpicbs06/anat/{sub-mpicbs06_space-other_T2w_seg-manual.json => sub-mpicbs06_space-other_T2w_label-SC_seg.json} (100%) rename derivatives/labels/sub-mpicbs06/anat/{sub-mpicbs06_space-other_T2w_seg-manual.nii.gz => sub-mpicbs06_space-other_T2w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-mpicbs06/anat/{sub-mpicbs06_space-other_T2w_labels-disc-manual.json => sub-mpicbs06_space-other_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-mpicbs06/anat/{sub-mpicbs06_space-other_T2w_labels-disc-manual.nii.gz => sub-mpicbs06_space-other_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-mpicbs06/dwi/{sub-mpicbs06_rec-average_dwi_seg-manual.json => sub-mpicbs06_rec-average_dwi_label-SC_seg.json} (100%) rename derivatives/labels/sub-mpicbs06/dwi/{sub-mpicbs06_rec-average_dwi_seg-manual.nii.gz => sub-mpicbs06_rec-average_dwi_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-mpicbs07/anat/{sub-mpicbs07_flip-1_mt-on_space-other_MTS_seg-manual.json => sub-mpicbs07_flip-1_mt-on_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-mpicbs07/anat/{sub-mpicbs07_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz => sub-mpicbs07_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-mpicbs07/anat/{sub-mpicbs07_flip-2_mt-off_space-other_MTS_seg-manual.json => sub-mpicbs07_flip-2_mt-off_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-mpicbs07/anat/{sub-mpicbs07_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz => sub-mpicbs07_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-mpicbs07/anat/{sub-mpicbs07_space-other_T1w_seg-manual.json => sub-mpicbs07_space-other_T1w_label-SC_seg.json} (100%) rename derivatives/labels/sub-mpicbs07/anat/{sub-mpicbs07_space-other_T1w_seg-manual.nii.gz => sub-mpicbs07_space-other_T1w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-mpicbs07/anat/{sub-mpicbs07_space-other_T1w_labels-disc-manual.json => sub-mpicbs07_space-other_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-mpicbs07/anat/{sub-mpicbs07_space-other_T1w_labels-disc-manual.nii.gz => sub-mpicbs07_space-other_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-mpicbs07/anat/{sub-mpicbs07_space-other_T2star_seg-manual.json => sub-mpicbs07_space-other_T2star_label-SC_seg.json} (100%) rename derivatives/labels/sub-mpicbs07/anat/{sub-mpicbs07_space-other_T2star_seg-manual.nii.gz => sub-mpicbs07_space-other_T2star_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-mpicbs07/anat/{sub-mpicbs07_space-other_T2w_seg-manual.json => sub-mpicbs07_space-other_T2w_label-SC_seg.json} (100%) rename derivatives/labels/sub-mpicbs07/anat/{sub-mpicbs07_space-other_T2w_seg-manual.nii.gz => sub-mpicbs07_space-other_T2w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-mpicbs07/anat/{sub-mpicbs07_space-other_T2w_labels-disc-manual.json => sub-mpicbs07_space-other_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-mpicbs07/anat/{sub-mpicbs07_space-other_T2w_labels-disc-manual.nii.gz => sub-mpicbs07_space-other_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-mpicbs07/dwi/{sub-mpicbs07_rec-average_dwi_seg-manual.json => sub-mpicbs07_rec-average_dwi_label-SC_seg.json} (100%) rename derivatives/labels/sub-mpicbs07/dwi/{sub-mpicbs07_rec-average_dwi_seg-manual.nii.gz => sub-mpicbs07_rec-average_dwi_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-nottwil01/anat/{sub-nottwil01_flip-1_mt-on_space-other_MTS_seg-manual.json => sub-nottwil01_flip-1_mt-on_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-nottwil01/anat/{sub-nottwil01_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz => sub-nottwil01_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-nottwil01/anat/{sub-nottwil01_flip-2_mt-off_space-other_MTS_seg-manual.json => sub-nottwil01_flip-2_mt-off_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-nottwil01/anat/{sub-nottwil01_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz => sub-nottwil01_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-nottwil01/anat/{sub-nottwil01_space-other_T1w_seg-manual.json => sub-nottwil01_space-other_T1w_label-SC_seg.json} (100%) rename derivatives/labels/sub-nottwil01/anat/{sub-nottwil01_space-other_T1w_seg-manual.nii.gz => sub-nottwil01_space-other_T1w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-nottwil01/anat/{sub-nottwil01_space-other_T1w_labels-disc-manual.json => sub-nottwil01_space-other_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-nottwil01/anat/{sub-nottwil01_space-other_T1w_labels-disc-manual.nii.gz => sub-nottwil01_space-other_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-nottwil01/anat/{sub-nottwil01_space-other_T2star_gmseg-manual.json => sub-nottwil01_space-other_T2star_gmlabel-SC_seg.json} (100%) rename derivatives/labels/sub-nottwil01/anat/{sub-nottwil01_space-other_T2star_gmseg-manual.nii.gz => sub-nottwil01_space-other_T2star_gmlabel-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-nottwil01/anat/{sub-nottwil01_space-other_T2star_seg-manual.json => sub-nottwil01_space-other_T2star_label-SC_seg.json} (100%) rename derivatives/labels/sub-nottwil01/anat/{sub-nottwil01_space-other_T2star_seg-manual.nii.gz => sub-nottwil01_space-other_T2star_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-nottwil01/anat/{sub-nottwil01_space-other_T2w_csfseg-manual.json => sub-nottwil01_space-other_T2w_csflabel-SC_seg.json} (100%) rename derivatives/labels/sub-nottwil01/anat/{sub-nottwil01_space-other_T2w_csfseg-manual.nii.gz => sub-nottwil01_space-other_T2w_csflabel-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-nottwil01/anat/{sub-nottwil01_space-other_T2w_seg-manual.json => sub-nottwil01_space-other_T2w_label-SC_seg.json} (100%) rename derivatives/labels/sub-nottwil01/anat/{sub-nottwil01_space-other_T2w_seg-manual.nii.gz => sub-nottwil01_space-other_T2w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-nottwil01/anat/{sub-nottwil01_space-other_T2w_labels-disc-manual.json => sub-nottwil01_space-other_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-nottwil01/anat/{sub-nottwil01_space-other_T2w_labels-disc-manual.nii.gz => sub-nottwil01_space-other_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-nottwil01/dwi/{sub-nottwil01_rec-average_dwi_seg-manual.json => sub-nottwil01_rec-average_dwi_label-SC_seg.json} (100%) rename derivatives/labels/sub-nottwil01/dwi/{sub-nottwil01_rec-average_dwi_seg-manual.nii.gz => sub-nottwil01_rec-average_dwi_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-nottwil02/anat/{sub-nottwil02_flip-1_mt-on_space-other_MTS_seg-manual.json => sub-nottwil02_flip-1_mt-on_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-nottwil02/anat/{sub-nottwil02_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz => sub-nottwil02_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-nottwil02/anat/{sub-nottwil02_flip-2_mt-off_space-other_MTS_seg-manual.json => sub-nottwil02_flip-2_mt-off_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-nottwil02/anat/{sub-nottwil02_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz => sub-nottwil02_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-nottwil02/anat/{sub-nottwil02_space-other_T1w_seg-manual.json => sub-nottwil02_space-other_T1w_label-SC_seg.json} (100%) rename derivatives/labels/sub-nottwil02/anat/{sub-nottwil02_space-other_T1w_seg-manual.nii.gz => sub-nottwil02_space-other_T1w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-nottwil02/anat/{sub-nottwil02_space-other_T1w_labels-disc-manual.json => sub-nottwil02_space-other_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-nottwil02/anat/{sub-nottwil02_space-other_T1w_labels-disc-manual.nii.gz => sub-nottwil02_space-other_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-nottwil02/anat/{sub-nottwil02_space-other_T2star_seg-manual.json => sub-nottwil02_space-other_T2star_label-SC_seg.json} (100%) rename derivatives/labels/sub-nottwil02/anat/{sub-nottwil02_space-other_T2star_seg-manual.nii.gz => sub-nottwil02_space-other_T2star_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-nottwil02/anat/{sub-nottwil02_space-other_T2w_seg-manual.json => sub-nottwil02_space-other_T2w_label-SC_seg.json} (100%) rename derivatives/labels/sub-nottwil02/anat/{sub-nottwil02_space-other_T2w_seg-manual.nii.gz => sub-nottwil02_space-other_T2w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-nottwil02/anat/{sub-nottwil02_space-other_T2w_labels-disc-manual.json => sub-nottwil02_space-other_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-nottwil02/anat/{sub-nottwil02_space-other_T2w_labels-disc-manual.nii.gz => sub-nottwil02_space-other_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-nottwil02/dwi/{sub-nottwil02_rec-average_dwi_seg-manual.json => sub-nottwil02_rec-average_dwi_label-SC_seg.json} (100%) rename derivatives/labels/sub-nottwil02/dwi/{sub-nottwil02_rec-average_dwi_seg-manual.nii.gz => sub-nottwil02_rec-average_dwi_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-nottwil03/anat/{sub-nottwil03_flip-1_mt-on_space-other_MTS_seg-manual.json => sub-nottwil03_flip-1_mt-on_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-nottwil03/anat/{sub-nottwil03_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz => sub-nottwil03_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-nottwil03/anat/{sub-nottwil03_flip-2_mt-off_space-other_MTS_seg-manual.json => sub-nottwil03_flip-2_mt-off_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-nottwil03/anat/{sub-nottwil03_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz => sub-nottwil03_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-nottwil03/anat/{sub-nottwil03_space-other_T1w_seg-manual.json => sub-nottwil03_space-other_T1w_label-SC_seg.json} (100%) rename derivatives/labels/sub-nottwil03/anat/{sub-nottwil03_space-other_T1w_seg-manual.nii.gz => sub-nottwil03_space-other_T1w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-nottwil03/anat/{sub-nottwil03_space-other_T1w_labels-disc-manual.json => sub-nottwil03_space-other_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-nottwil03/anat/{sub-nottwil03_space-other_T1w_labels-disc-manual.nii.gz => sub-nottwil03_space-other_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-nottwil03/anat/{sub-nottwil03_space-other_T2star_gmseg-manual.json => sub-nottwil03_space-other_T2star_gmlabel-SC_seg.json} (100%) rename derivatives/labels/sub-nottwil03/anat/{sub-nottwil03_space-other_T2star_gmseg-manual.nii.gz => sub-nottwil03_space-other_T2star_gmlabel-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-nottwil03/anat/{sub-nottwil03_space-other_T2star_seg-manual.json => sub-nottwil03_space-other_T2star_label-SC_seg.json} (100%) rename derivatives/labels/sub-nottwil03/anat/{sub-nottwil03_space-other_T2star_seg-manual.nii.gz => sub-nottwil03_space-other_T2star_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-nottwil03/anat/{sub-nottwil03_space-other_T2w_csfseg-manual.json => sub-nottwil03_space-other_T2w_csflabel-SC_seg.json} (100%) rename derivatives/labels/sub-nottwil03/anat/{sub-nottwil03_space-other_T2w_csfseg-manual.nii.gz => sub-nottwil03_space-other_T2w_csflabel-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-nottwil03/anat/{sub-nottwil03_space-other_T2w_seg-manual.json => sub-nottwil03_space-other_T2w_label-SC_seg.json} (100%) rename derivatives/labels/sub-nottwil03/anat/{sub-nottwil03_space-other_T2w_seg-manual.nii.gz => sub-nottwil03_space-other_T2w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-nottwil03/anat/{sub-nottwil03_space-other_T2w_labels-disc-manual.json => sub-nottwil03_space-other_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-nottwil03/anat/{sub-nottwil03_space-other_T2w_labels-disc-manual.nii.gz => sub-nottwil03_space-other_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-nottwil03/dwi/{sub-nottwil03_rec-average_dwi_seg-manual.json => sub-nottwil03_rec-average_dwi_label-SC_seg.json} (100%) rename derivatives/labels/sub-nottwil03/dwi/{sub-nottwil03_rec-average_dwi_seg-manual.nii.gz => sub-nottwil03_rec-average_dwi_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-nottwil04/anat/{sub-nottwil04_flip-1_mt-on_space-other_MTS_seg-manual.json => sub-nottwil04_flip-1_mt-on_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-nottwil04/anat/{sub-nottwil04_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz => sub-nottwil04_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-nottwil04/anat/{sub-nottwil04_flip-2_mt-off_space-other_MTS_seg-manual.json => sub-nottwil04_flip-2_mt-off_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-nottwil04/anat/{sub-nottwil04_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz => sub-nottwil04_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-nottwil04/anat/{sub-nottwil04_space-other_T1w_seg-manual.json => sub-nottwil04_space-other_T1w_label-SC_seg.json} (100%) rename derivatives/labels/sub-nottwil04/anat/{sub-nottwil04_space-other_T1w_seg-manual.nii.gz => sub-nottwil04_space-other_T1w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-nottwil04/anat/{sub-nottwil04_space-other_T1w_labels-disc-manual.json => sub-nottwil04_space-other_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-nottwil04/anat/{sub-nottwil04_space-other_T1w_labels-disc-manual.nii.gz => sub-nottwil04_space-other_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-nottwil04/anat/{sub-nottwil04_space-other_T2star_seg-manual.json => sub-nottwil04_space-other_T2star_label-SC_seg.json} (100%) rename derivatives/labels/sub-nottwil04/anat/{sub-nottwil04_space-other_T2star_seg-manual.nii.gz => sub-nottwil04_space-other_T2star_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-nottwil04/anat/{sub-nottwil04_space-other_T2w_csfseg-manual.json => sub-nottwil04_space-other_T2w_csflabel-SC_seg.json} (100%) rename derivatives/labels/sub-nottwil04/anat/{sub-nottwil04_space-other_T2w_csfseg-manual.nii.gz => sub-nottwil04_space-other_T2w_csflabel-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-nottwil04/anat/{sub-nottwil04_space-other_T2w_seg-manual.json => sub-nottwil04_space-other_T2w_label-SC_seg.json} (100%) rename derivatives/labels/sub-nottwil04/anat/{sub-nottwil04_space-other_T2w_seg-manual.nii.gz => sub-nottwil04_space-other_T2w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-nottwil04/anat/{sub-nottwil04_space-other_T2w_labels-disc-manual.json => sub-nottwil04_space-other_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-nottwil04/anat/{sub-nottwil04_space-other_T2w_labels-disc-manual.nii.gz => sub-nottwil04_space-other_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-nottwil04/dwi/{sub-nottwil04_rec-average_dwi_seg-manual.json => sub-nottwil04_rec-average_dwi_label-SC_seg.json} (100%) rename derivatives/labels/sub-nottwil04/dwi/{sub-nottwil04_rec-average_dwi_seg-manual.nii.gz => sub-nottwil04_rec-average_dwi_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-nottwil05/anat/{sub-nottwil05_flip-1_mt-on_space-other_MTS_seg-manual.json => sub-nottwil05_flip-1_mt-on_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-nottwil05/anat/{sub-nottwil05_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz => sub-nottwil05_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-nottwil05/anat/{sub-nottwil05_flip-2_mt-off_space-other_MTS_seg-manual.json => sub-nottwil05_flip-2_mt-off_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-nottwil05/anat/{sub-nottwil05_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz => sub-nottwil05_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-nottwil05/anat/{sub-nottwil05_space-other_T1w_seg-manual.json => sub-nottwil05_space-other_T1w_label-SC_seg.json} (100%) rename derivatives/labels/sub-nottwil05/anat/{sub-nottwil05_space-other_T1w_seg-manual.nii.gz => sub-nottwil05_space-other_T1w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-nottwil05/anat/{sub-nottwil05_space-other_T1w_labels-disc-manual.json => sub-nottwil05_space-other_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-nottwil05/anat/{sub-nottwil05_space-other_T1w_labels-disc-manual.nii.gz => sub-nottwil05_space-other_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-nottwil05/anat/{sub-nottwil05_space-other_T2star_seg-manual.json => sub-nottwil05_space-other_T2star_label-SC_seg.json} (100%) rename derivatives/labels/sub-nottwil05/anat/{sub-nottwil05_space-other_T2star_seg-manual.nii.gz => sub-nottwil05_space-other_T2star_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-nottwil05/anat/{sub-nottwil05_space-other_T2w_seg-manual.json => sub-nottwil05_space-other_T2w_label-SC_seg.json} (100%) rename derivatives/labels/sub-nottwil05/anat/{sub-nottwil05_space-other_T2w_seg-manual.nii.gz => sub-nottwil05_space-other_T2w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-nottwil05/anat/{sub-nottwil05_space-other_T2w_labels-disc-manual.json => sub-nottwil05_space-other_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-nottwil05/anat/{sub-nottwil05_space-other_T2w_labels-disc-manual.nii.gz => sub-nottwil05_space-other_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-nottwil05/dwi/{sub-nottwil05_rec-average_dwi_seg-manual.json => sub-nottwil05_rec-average_dwi_label-SC_seg.json} (100%) rename derivatives/labels/sub-nottwil05/dwi/{sub-nottwil05_rec-average_dwi_seg-manual.nii.gz => sub-nottwil05_rec-average_dwi_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-nottwil06/anat/{sub-nottwil06_flip-1_mt-on_space-other_MTS_seg-manual.json => sub-nottwil06_flip-1_mt-on_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-nottwil06/anat/{sub-nottwil06_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz => sub-nottwil06_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-nottwil06/anat/{sub-nottwil06_flip-2_mt-off_space-other_MTS_seg-manual.json => sub-nottwil06_flip-2_mt-off_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-nottwil06/anat/{sub-nottwil06_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz => sub-nottwil06_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-nottwil06/anat/{sub-nottwil06_space-other_T1w_seg-manual.json => sub-nottwil06_space-other_T1w_label-SC_seg.json} (100%) rename derivatives/labels/sub-nottwil06/anat/{sub-nottwil06_space-other_T1w_seg-manual.nii.gz => sub-nottwil06_space-other_T1w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-nottwil06/anat/{sub-nottwil06_space-other_T1w_labels-disc-manual.json => sub-nottwil06_space-other_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-nottwil06/anat/{sub-nottwil06_space-other_T1w_labels-disc-manual.nii.gz => sub-nottwil06_space-other_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-nottwil06/anat/{sub-nottwil06_space-other_T2star_seg-manual.json => sub-nottwil06_space-other_T2star_label-SC_seg.json} (100%) rename derivatives/labels/sub-nottwil06/anat/{sub-nottwil06_space-other_T2star_seg-manual.nii.gz => sub-nottwil06_space-other_T2star_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-nottwil06/anat/{sub-nottwil06_space-other_T2w_seg-manual.json => sub-nottwil06_space-other_T2w_label-SC_seg.json} (100%) rename derivatives/labels/sub-nottwil06/anat/{sub-nottwil06_space-other_T2w_seg-manual.nii.gz => sub-nottwil06_space-other_T2w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-nottwil06/anat/{sub-nottwil06_space-other_T2w_labels-disc-manual.json => sub-nottwil06_space-other_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-nottwil06/anat/{sub-nottwil06_space-other_T2w_labels-disc-manual.nii.gz => sub-nottwil06_space-other_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-nottwil06/dwi/{sub-nottwil06_rec-average_dwi_seg-manual.json => sub-nottwil06_rec-average_dwi_label-SC_seg.json} (100%) rename derivatives/labels/sub-nottwil06/dwi/{sub-nottwil06_rec-average_dwi_seg-manual.nii.gz => sub-nottwil06_rec-average_dwi_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-nwu01/anat/{sub-nwu01_flip-1_mt-on_space-other_MTS_seg-manual.json => sub-nwu01_flip-1_mt-on_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-nwu01/anat/{sub-nwu01_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz => sub-nwu01_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-nwu01/anat/{sub-nwu01_flip-2_mt-off_space-other_MTS_seg-manual.json => sub-nwu01_flip-2_mt-off_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-nwu01/anat/{sub-nwu01_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz => sub-nwu01_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-nwu01/anat/{sub-nwu01_space-other_T1w_seg-manual.json => sub-nwu01_space-other_T1w_label-SC_seg.json} (100%) rename derivatives/labels/sub-nwu01/anat/{sub-nwu01_space-other_T1w_seg-manual.nii.gz => sub-nwu01_space-other_T1w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-nwu01/anat/{sub-nwu01_space-other_T1w_labels-disc-manual.json => sub-nwu01_space-other_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-nwu01/anat/{sub-nwu01_space-other_T1w_labels-disc-manual.nii.gz => sub-nwu01_space-other_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-nwu01/anat/{sub-nwu01_space-other_T2star_seg-manual.json => sub-nwu01_space-other_T2star_label-SC_seg.json} (100%) rename derivatives/labels/sub-nwu01/anat/{sub-nwu01_space-other_T2star_seg-manual.nii.gz => sub-nwu01_space-other_T2star_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-nwu01/anat/{sub-nwu01_space-other_T2w_seg-manual.json => sub-nwu01_space-other_T2w_label-SC_seg.json} (100%) rename derivatives/labels/sub-nwu01/anat/{sub-nwu01_space-other_T2w_seg-manual.nii.gz => sub-nwu01_space-other_T2w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-nwu01/anat/{sub-nwu01_space-other_T2w_labels-disc-manual.json => sub-nwu01_space-other_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-nwu01/anat/{sub-nwu01_space-other_T2w_labels-disc-manual.nii.gz => sub-nwu01_space-other_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-nwu01/dwi/{sub-nwu01_rec-average_dwi_seg-manual.json => sub-nwu01_rec-average_dwi_label-SC_seg.json} (100%) rename derivatives/labels/sub-nwu01/dwi/{sub-nwu01_rec-average_dwi_seg-manual.nii.gz => sub-nwu01_rec-average_dwi_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-nwu02/anat/{sub-nwu02_flip-1_mt-on_space-other_MTS_seg-manual.json => sub-nwu02_flip-1_mt-on_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-nwu02/anat/{sub-nwu02_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz => sub-nwu02_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-nwu02/anat/{sub-nwu02_flip-2_mt-off_space-other_MTS_seg-manual.json => sub-nwu02_flip-2_mt-off_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-nwu02/anat/{sub-nwu02_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz => sub-nwu02_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-nwu02/anat/{sub-nwu02_space-other_T1w_seg-manual.json => sub-nwu02_space-other_T1w_label-SC_seg.json} (100%) rename derivatives/labels/sub-nwu02/anat/{sub-nwu02_space-other_T1w_seg-manual.nii.gz => sub-nwu02_space-other_T1w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-nwu02/anat/{sub-nwu02_space-other_T1w_labels-disc-manual.json => sub-nwu02_space-other_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-nwu02/anat/{sub-nwu02_space-other_T1w_labels-disc-manual.nii.gz => sub-nwu02_space-other_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-nwu02/anat/{sub-nwu02_space-other_T2star_seg-manual.json => sub-nwu02_space-other_T2star_label-SC_seg.json} (100%) rename derivatives/labels/sub-nwu02/anat/{sub-nwu02_space-other_T2star_seg-manual.nii.gz => sub-nwu02_space-other_T2star_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-nwu02/anat/{sub-nwu02_space-other_T2w_seg-manual.json => sub-nwu02_space-other_T2w_label-SC_seg.json} (100%) rename derivatives/labels/sub-nwu02/anat/{sub-nwu02_space-other_T2w_seg-manual.nii.gz => sub-nwu02_space-other_T2w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-nwu02/anat/{sub-nwu02_space-other_T2w_labels-disc-manual.json => sub-nwu02_space-other_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-nwu02/anat/{sub-nwu02_space-other_T2w_labels-disc-manual.nii.gz => sub-nwu02_space-other_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-nwu02/dwi/{sub-nwu02_rec-average_dwi_seg-manual.json => sub-nwu02_rec-average_dwi_label-SC_seg.json} (100%) rename derivatives/labels/sub-nwu02/dwi/{sub-nwu02_rec-average_dwi_seg-manual.nii.gz => sub-nwu02_rec-average_dwi_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-nwu03/anat/{sub-nwu03_flip-1_mt-on_space-other_MTS_seg-manual.json => sub-nwu03_flip-1_mt-on_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-nwu03/anat/{sub-nwu03_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz => sub-nwu03_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-nwu03/anat/{sub-nwu03_flip-2_mt-off_space-other_MTS_seg-manual.json => sub-nwu03_flip-2_mt-off_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-nwu03/anat/{sub-nwu03_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz => sub-nwu03_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-nwu03/anat/{sub-nwu03_space-other_T1w_seg-manual.json => sub-nwu03_space-other_T1w_label-SC_seg.json} (100%) rename derivatives/labels/sub-nwu03/anat/{sub-nwu03_space-other_T1w_seg-manual.nii.gz => sub-nwu03_space-other_T1w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-nwu03/anat/{sub-nwu03_space-other_T1w_labels-disc-manual.json => sub-nwu03_space-other_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-nwu03/anat/{sub-nwu03_space-other_T1w_labels-disc-manual.nii.gz => sub-nwu03_space-other_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-nwu03/anat/{sub-nwu03_space-other_T2star_seg-manual.json => sub-nwu03_space-other_T2star_label-SC_seg.json} (100%) rename derivatives/labels/sub-nwu03/anat/{sub-nwu03_space-other_T2star_seg-manual.nii.gz => sub-nwu03_space-other_T2star_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-nwu03/anat/{sub-nwu03_space-other_T2w_seg-manual.json => sub-nwu03_space-other_T2w_label-SC_seg.json} (100%) rename derivatives/labels/sub-nwu03/anat/{sub-nwu03_space-other_T2w_seg-manual.nii.gz => sub-nwu03_space-other_T2w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-nwu03/anat/{sub-nwu03_space-other_T2w_labels-disc-manual.json => sub-nwu03_space-other_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-nwu03/anat/{sub-nwu03_space-other_T2w_labels-disc-manual.nii.gz => sub-nwu03_space-other_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-nwu03/dwi/{sub-nwu03_rec-average_dwi_seg-manual.json => sub-nwu03_rec-average_dwi_label-SC_seg.json} (100%) rename derivatives/labels/sub-nwu03/dwi/{sub-nwu03_rec-average_dwi_seg-manual.nii.gz => sub-nwu03_rec-average_dwi_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-nwu04/anat/{sub-nwu04_flip-1_mt-on_space-other_MTS_seg-manual.json => sub-nwu04_flip-1_mt-on_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-nwu04/anat/{sub-nwu04_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz => sub-nwu04_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-nwu04/anat/{sub-nwu04_flip-2_mt-off_space-other_MTS_seg-manual.json => sub-nwu04_flip-2_mt-off_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-nwu04/anat/{sub-nwu04_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz => sub-nwu04_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-nwu04/anat/{sub-nwu04_space-other_T1w_seg-manual.json => sub-nwu04_space-other_T1w_label-SC_seg.json} (100%) rename derivatives/labels/sub-nwu04/anat/{sub-nwu04_space-other_T1w_seg-manual.nii.gz => sub-nwu04_space-other_T1w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-nwu04/anat/{sub-nwu04_space-other_T1w_labels-disc-manual.json => sub-nwu04_space-other_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-nwu04/anat/{sub-nwu04_space-other_T1w_labels-disc-manual.nii.gz => sub-nwu04_space-other_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-nwu04/anat/{sub-nwu04_space-other_T2star_seg-manual.json => sub-nwu04_space-other_T2star_label-SC_seg.json} (100%) rename derivatives/labels/sub-nwu04/anat/{sub-nwu04_space-other_T2star_seg-manual.nii.gz => sub-nwu04_space-other_T2star_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-nwu04/anat/{sub-nwu04_space-other_T2w_seg-manual.json => sub-nwu04_space-other_T2w_label-SC_seg.json} (100%) rename derivatives/labels/sub-nwu04/anat/{sub-nwu04_space-other_T2w_seg-manual.nii.gz => sub-nwu04_space-other_T2w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-nwu04/anat/{sub-nwu04_space-other_T2w_labels-disc-manual.json => sub-nwu04_space-other_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-nwu04/anat/{sub-nwu04_space-other_T2w_labels-disc-manual.nii.gz => sub-nwu04_space-other_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-nwu04/dwi/{sub-nwu04_rec-average_dwi_seg-manual.json => sub-nwu04_rec-average_dwi_label-SC_seg.json} (100%) rename derivatives/labels/sub-nwu04/dwi/{sub-nwu04_rec-average_dwi_seg-manual.nii.gz => sub-nwu04_rec-average_dwi_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-nwu05/anat/{sub-nwu05_flip-1_mt-on_space-other_MTS_seg-manual.json => sub-nwu05_flip-1_mt-on_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-nwu05/anat/{sub-nwu05_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz => sub-nwu05_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-nwu05/anat/{sub-nwu05_flip-2_mt-off_space-other_MTS_seg-manual.json => sub-nwu05_flip-2_mt-off_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-nwu05/anat/{sub-nwu05_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz => sub-nwu05_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-nwu05/anat/{sub-nwu05_space-other_T1w_seg-manual.json => sub-nwu05_space-other_T1w_label-SC_seg.json} (100%) rename derivatives/labels/sub-nwu05/anat/{sub-nwu05_space-other_T1w_seg-manual.nii.gz => sub-nwu05_space-other_T1w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-nwu05/anat/{sub-nwu05_space-other_T1w_labels-disc-manual.json => sub-nwu05_space-other_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-nwu05/anat/{sub-nwu05_space-other_T1w_labels-disc-manual.nii.gz => sub-nwu05_space-other_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-nwu05/anat/{sub-nwu05_space-other_T2star_seg-manual.json => sub-nwu05_space-other_T2star_label-SC_seg.json} (100%) rename derivatives/labels/sub-nwu05/anat/{sub-nwu05_space-other_T2star_seg-manual.nii.gz => sub-nwu05_space-other_T2star_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-nwu05/anat/{sub-nwu05_space-other_T2w_seg-manual.json => sub-nwu05_space-other_T2w_label-SC_seg.json} (100%) rename derivatives/labels/sub-nwu05/anat/{sub-nwu05_space-other_T2w_seg-manual.nii.gz => sub-nwu05_space-other_T2w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-nwu05/anat/{sub-nwu05_space-other_T2w_labels-disc-manual.json => sub-nwu05_space-other_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-nwu05/anat/{sub-nwu05_space-other_T2w_labels-disc-manual.nii.gz => sub-nwu05_space-other_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-nwu05/dwi/{sub-nwu05_rec-average_dwi_seg-manual.json => sub-nwu05_rec-average_dwi_label-SC_seg.json} (100%) rename derivatives/labels/sub-nwu05/dwi/{sub-nwu05_rec-average_dwi_seg-manual.nii.gz => sub-nwu05_rec-average_dwi_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-nwu06/anat/{sub-nwu06_flip-1_mt-on_space-other_MTS_seg-manual.json => sub-nwu06_flip-1_mt-on_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-nwu06/anat/{sub-nwu06_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz => sub-nwu06_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-nwu06/anat/{sub-nwu06_flip-2_mt-off_space-other_MTS_seg-manual.json => sub-nwu06_flip-2_mt-off_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-nwu06/anat/{sub-nwu06_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz => sub-nwu06_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-nwu06/anat/{sub-nwu06_space-other_T1w_seg-manual.json => sub-nwu06_space-other_T1w_label-SC_seg.json} (100%) rename derivatives/labels/sub-nwu06/anat/{sub-nwu06_space-other_T1w_seg-manual.nii.gz => sub-nwu06_space-other_T1w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-nwu06/anat/{sub-nwu06_space-other_T1w_labels-disc-manual.json => sub-nwu06_space-other_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-nwu06/anat/{sub-nwu06_space-other_T1w_labels-disc-manual.nii.gz => sub-nwu06_space-other_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-nwu06/anat/{sub-nwu06_space-other_T2star_seg-manual.json => sub-nwu06_space-other_T2star_label-SC_seg.json} (100%) rename derivatives/labels/sub-nwu06/anat/{sub-nwu06_space-other_T2star_seg-manual.nii.gz => sub-nwu06_space-other_T2star_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-nwu06/anat/{sub-nwu06_space-other_T2w_seg-manual.json => sub-nwu06_space-other_T2w_label-SC_seg.json} (100%) rename derivatives/labels/sub-nwu06/anat/{sub-nwu06_space-other_T2w_seg-manual.nii.gz => sub-nwu06_space-other_T2w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-nwu06/anat/{sub-nwu06_space-other_T2w_labels-disc-manual.json => sub-nwu06_space-other_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-nwu06/anat/{sub-nwu06_space-other_T2w_labels-disc-manual.nii.gz => sub-nwu06_space-other_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-nwu06/dwi/{sub-nwu06_rec-average_dwi_seg-manual.json => sub-nwu06_rec-average_dwi_label-SC_seg.json} (100%) rename derivatives/labels/sub-nwu06/dwi/{sub-nwu06_rec-average_dwi_seg-manual.nii.gz => sub-nwu06_rec-average_dwi_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-oxfordFmrib01/anat/{sub-oxfordFmrib01_flip-1_mt-on_space-other_MTS_seg-manual.json => sub-oxfordFmrib01_flip-1_mt-on_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-oxfordFmrib01/anat/{sub-oxfordFmrib01_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz => sub-oxfordFmrib01_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-oxfordFmrib01/anat/{sub-oxfordFmrib01_flip-2_mt-off_space-other_MTS_seg-manual.json => sub-oxfordFmrib01_flip-2_mt-off_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-oxfordFmrib01/anat/{sub-oxfordFmrib01_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz => sub-oxfordFmrib01_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-oxfordFmrib01/anat/{sub-oxfordFmrib01_space-other_T1w_seg-manual.json => sub-oxfordFmrib01_space-other_T1w_label-SC_seg.json} (100%) rename derivatives/labels/sub-oxfordFmrib01/anat/{sub-oxfordFmrib01_space-other_T1w_seg-manual.nii.gz => sub-oxfordFmrib01_space-other_T1w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-oxfordFmrib01/anat/{sub-oxfordFmrib01_space-other_T1w_labels-disc-manual.json => sub-oxfordFmrib01_space-other_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-oxfordFmrib01/anat/{sub-oxfordFmrib01_space-other_T1w_labels-disc-manual.nii.gz => sub-oxfordFmrib01_space-other_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-oxfordFmrib01/anat/{sub-oxfordFmrib01_space-other_T2star_seg-manual.json => sub-oxfordFmrib01_space-other_T2star_label-SC_seg.json} (100%) rename derivatives/labels/sub-oxfordFmrib01/anat/{sub-oxfordFmrib01_space-other_T2star_seg-manual.nii.gz => sub-oxfordFmrib01_space-other_T2star_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-oxfordFmrib01/anat/{sub-oxfordFmrib01_space-other_T2w_seg-manual.json => sub-oxfordFmrib01_space-other_T2w_label-SC_seg.json} (100%) rename derivatives/labels/sub-oxfordFmrib01/anat/{sub-oxfordFmrib01_space-other_T2w_seg-manual.nii.gz => sub-oxfordFmrib01_space-other_T2w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-oxfordFmrib01/anat/{sub-oxfordFmrib01_space-other_T2w_labels-disc-manual.json => sub-oxfordFmrib01_space-other_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-oxfordFmrib01/anat/{sub-oxfordFmrib01_space-other_T2w_labels-disc-manual.nii.gz => sub-oxfordFmrib01_space-other_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-oxfordFmrib01/dwi/{sub-oxfordFmrib01_rec-average_dwi_seg-manual.json => sub-oxfordFmrib01_rec-average_dwi_label-SC_seg.json} (100%) rename derivatives/labels/sub-oxfordFmrib01/dwi/{sub-oxfordFmrib01_rec-average_dwi_seg-manual.nii.gz => sub-oxfordFmrib01_rec-average_dwi_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-oxfordFmrib02/anat/{sub-oxfordFmrib02_flip-1_mt-on_space-other_MTS_seg-manual.json => sub-oxfordFmrib02_flip-1_mt-on_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-oxfordFmrib02/anat/{sub-oxfordFmrib02_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz => sub-oxfordFmrib02_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-oxfordFmrib02/anat/{sub-oxfordFmrib02_flip-2_mt-off_space-other_MTS_seg-manual.json => sub-oxfordFmrib02_flip-2_mt-off_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-oxfordFmrib02/anat/{sub-oxfordFmrib02_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz => sub-oxfordFmrib02_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-oxfordFmrib02/anat/{sub-oxfordFmrib02_space-other_T1w_seg-manual.json => sub-oxfordFmrib02_space-other_T1w_label-SC_seg.json} (100%) rename derivatives/labels/sub-oxfordFmrib02/anat/{sub-oxfordFmrib02_space-other_T1w_seg-manual.nii.gz => sub-oxfordFmrib02_space-other_T1w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-oxfordFmrib02/anat/{sub-oxfordFmrib02_space-other_T1w_labels-disc-manual.json => sub-oxfordFmrib02_space-other_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-oxfordFmrib02/anat/{sub-oxfordFmrib02_space-other_T1w_labels-disc-manual.nii.gz => sub-oxfordFmrib02_space-other_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-oxfordFmrib02/anat/{sub-oxfordFmrib02_space-other_T2star_seg-manual.json => sub-oxfordFmrib02_space-other_T2star_label-SC_seg.json} (100%) rename derivatives/labels/sub-oxfordFmrib02/anat/{sub-oxfordFmrib02_space-other_T2star_seg-manual.nii.gz => sub-oxfordFmrib02_space-other_T2star_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-oxfordFmrib02/anat/{sub-oxfordFmrib02_space-other_T2w_seg-manual.json => sub-oxfordFmrib02_space-other_T2w_label-SC_seg.json} (100%) rename derivatives/labels/sub-oxfordFmrib02/anat/{sub-oxfordFmrib02_space-other_T2w_seg-manual.nii.gz => sub-oxfordFmrib02_space-other_T2w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-oxfordFmrib02/anat/{sub-oxfordFmrib02_space-other_T2w_labels-disc-manual.json => sub-oxfordFmrib02_space-other_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-oxfordFmrib02/anat/{sub-oxfordFmrib02_space-other_T2w_labels-disc-manual.nii.gz => sub-oxfordFmrib02_space-other_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-oxfordFmrib02/dwi/{sub-oxfordFmrib02_rec-average_dwi_seg-manual.json => sub-oxfordFmrib02_rec-average_dwi_label-SC_seg.json} (100%) rename derivatives/labels/sub-oxfordFmrib02/dwi/{sub-oxfordFmrib02_rec-average_dwi_seg-manual.nii.gz => sub-oxfordFmrib02_rec-average_dwi_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-oxfordFmrib03/anat/{sub-oxfordFmrib03_flip-1_mt-on_space-other_MTS_seg-manual.json => sub-oxfordFmrib03_flip-1_mt-on_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-oxfordFmrib03/anat/{sub-oxfordFmrib03_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz => sub-oxfordFmrib03_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-oxfordFmrib03/anat/{sub-oxfordFmrib03_flip-2_mt-off_space-other_MTS_seg-manual.json => sub-oxfordFmrib03_flip-2_mt-off_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-oxfordFmrib03/anat/{sub-oxfordFmrib03_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz => sub-oxfordFmrib03_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-oxfordFmrib03/anat/{sub-oxfordFmrib03_space-other_T1w_seg-manual.json => sub-oxfordFmrib03_space-other_T1w_label-SC_seg.json} (100%) rename derivatives/labels/sub-oxfordFmrib03/anat/{sub-oxfordFmrib03_space-other_T1w_seg-manual.nii.gz => sub-oxfordFmrib03_space-other_T1w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-oxfordFmrib03/anat/{sub-oxfordFmrib03_space-other_T1w_labels-disc-manual.json => sub-oxfordFmrib03_space-other_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-oxfordFmrib03/anat/{sub-oxfordFmrib03_space-other_T1w_labels-disc-manual.nii.gz => sub-oxfordFmrib03_space-other_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-oxfordFmrib03/anat/{sub-oxfordFmrib03_space-other_T2star_seg-manual.json => sub-oxfordFmrib03_space-other_T2star_label-SC_seg.json} (100%) rename derivatives/labels/sub-oxfordFmrib03/anat/{sub-oxfordFmrib03_space-other_T2star_seg-manual.nii.gz => sub-oxfordFmrib03_space-other_T2star_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-oxfordFmrib03/anat/{sub-oxfordFmrib03_space-other_T2w_seg-manual.json => sub-oxfordFmrib03_space-other_T2w_label-SC_seg.json} (100%) rename derivatives/labels/sub-oxfordFmrib03/anat/{sub-oxfordFmrib03_space-other_T2w_seg-manual.nii.gz => sub-oxfordFmrib03_space-other_T2w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-oxfordFmrib03/anat/{sub-oxfordFmrib03_space-other_T2w_labels-disc-manual.json => sub-oxfordFmrib03_space-other_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-oxfordFmrib03/anat/{sub-oxfordFmrib03_space-other_T2w_labels-disc-manual.nii.gz => sub-oxfordFmrib03_space-other_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-oxfordFmrib03/dwi/{sub-oxfordFmrib03_rec-average_dwi_seg-manual.json => sub-oxfordFmrib03_rec-average_dwi_label-SC_seg.json} (100%) rename derivatives/labels/sub-oxfordFmrib03/dwi/{sub-oxfordFmrib03_rec-average_dwi_seg-manual.nii.gz => sub-oxfordFmrib03_rec-average_dwi_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-oxfordFmrib04/anat/{sub-oxfordFmrib04_flip-1_mt-on_space-other_MTS_seg-manual.json => sub-oxfordFmrib04_flip-1_mt-on_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-oxfordFmrib04/anat/{sub-oxfordFmrib04_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz => sub-oxfordFmrib04_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-oxfordFmrib04/anat/{sub-oxfordFmrib04_flip-2_mt-off_space-other_MTS_seg-manual.json => sub-oxfordFmrib04_flip-2_mt-off_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-oxfordFmrib04/anat/{sub-oxfordFmrib04_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz => sub-oxfordFmrib04_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-oxfordFmrib04/anat/{sub-oxfordFmrib04_space-other_T1w_seg-manual.json => sub-oxfordFmrib04_space-other_T1w_label-SC_seg.json} (100%) rename derivatives/labels/sub-oxfordFmrib04/anat/{sub-oxfordFmrib04_space-other_T1w_seg-manual.nii.gz => sub-oxfordFmrib04_space-other_T1w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-oxfordFmrib04/anat/{sub-oxfordFmrib04_space-other_T1w_labels-disc-manual.json => sub-oxfordFmrib04_space-other_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-oxfordFmrib04/anat/{sub-oxfordFmrib04_space-other_T1w_labels-disc-manual.nii.gz => sub-oxfordFmrib04_space-other_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-oxfordFmrib04/anat/{sub-oxfordFmrib04_space-other_T2star_seg-manual.json => sub-oxfordFmrib04_space-other_T2star_label-SC_seg.json} (100%) rename derivatives/labels/sub-oxfordFmrib04/anat/{sub-oxfordFmrib04_space-other_T2star_seg-manual.nii.gz => sub-oxfordFmrib04_space-other_T2star_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-oxfordFmrib04/anat/{sub-oxfordFmrib04_space-other_T2w_seg-manual.json => sub-oxfordFmrib04_space-other_T2w_label-SC_seg.json} (100%) rename derivatives/labels/sub-oxfordFmrib04/anat/{sub-oxfordFmrib04_space-other_T2w_seg-manual.nii.gz => sub-oxfordFmrib04_space-other_T2w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-oxfordFmrib04/anat/{sub-oxfordFmrib04_space-other_T2w_labels-disc-manual.json => sub-oxfordFmrib04_space-other_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-oxfordFmrib04/anat/{sub-oxfordFmrib04_space-other_T2w_labels-disc-manual.nii.gz => sub-oxfordFmrib04_space-other_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-oxfordFmrib04/dwi/{sub-oxfordFmrib04_rec-average_dwi_seg-manual.json => sub-oxfordFmrib04_rec-average_dwi_label-SC_seg.json} (100%) rename derivatives/labels/sub-oxfordFmrib04/dwi/{sub-oxfordFmrib04_rec-average_dwi_seg-manual.nii.gz => sub-oxfordFmrib04_rec-average_dwi_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-oxfordFmrib05/anat/{sub-oxfordFmrib05_flip-1_mt-on_space-other_MTS_seg-manual.json => sub-oxfordFmrib05_flip-1_mt-on_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-oxfordFmrib05/anat/{sub-oxfordFmrib05_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz => sub-oxfordFmrib05_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-oxfordFmrib05/anat/{sub-oxfordFmrib05_flip-2_mt-off_space-other_MTS_seg-manual.json => sub-oxfordFmrib05_flip-2_mt-off_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-oxfordFmrib05/anat/{sub-oxfordFmrib05_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz => sub-oxfordFmrib05_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-oxfordFmrib05/anat/{sub-oxfordFmrib05_space-other_T1w_seg-manual.json => sub-oxfordFmrib05_space-other_T1w_label-SC_seg.json} (100%) rename derivatives/labels/sub-oxfordFmrib05/anat/{sub-oxfordFmrib05_space-other_T1w_seg-manual.nii.gz => sub-oxfordFmrib05_space-other_T1w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-oxfordFmrib05/anat/{sub-oxfordFmrib05_space-other_T1w_labels-disc-manual.json => sub-oxfordFmrib05_space-other_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-oxfordFmrib05/anat/{sub-oxfordFmrib05_space-other_T1w_labels-disc-manual.nii.gz => sub-oxfordFmrib05_space-other_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-oxfordFmrib05/anat/{sub-oxfordFmrib05_space-other_T2star_seg-manual.json => sub-oxfordFmrib05_space-other_T2star_label-SC_seg.json} (100%) rename derivatives/labels/sub-oxfordFmrib05/anat/{sub-oxfordFmrib05_space-other_T2star_seg-manual.nii.gz => sub-oxfordFmrib05_space-other_T2star_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-oxfordFmrib05/anat/{sub-oxfordFmrib05_space-other_T2w_seg-manual.json => sub-oxfordFmrib05_space-other_T2w_label-SC_seg.json} (100%) rename derivatives/labels/sub-oxfordFmrib05/anat/{sub-oxfordFmrib05_space-other_T2w_seg-manual.nii.gz => sub-oxfordFmrib05_space-other_T2w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-oxfordFmrib05/anat/{sub-oxfordFmrib05_space-other_T2w_labels-disc-manual.json => sub-oxfordFmrib05_space-other_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-oxfordFmrib05/anat/{sub-oxfordFmrib05_space-other_T2w_labels-disc-manual.nii.gz => sub-oxfordFmrib05_space-other_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-oxfordFmrib05/dwi/{sub-oxfordFmrib05_rec-average_dwi_seg-manual.json => sub-oxfordFmrib05_rec-average_dwi_label-SC_seg.json} (100%) rename derivatives/labels/sub-oxfordFmrib05/dwi/{sub-oxfordFmrib05_rec-average_dwi_seg-manual.nii.gz => sub-oxfordFmrib05_rec-average_dwi_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-oxfordFmrib06/anat/{sub-oxfordFmrib06_flip-1_mt-on_space-other_MTS_seg-manual.json => sub-oxfordFmrib06_flip-1_mt-on_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-oxfordFmrib06/anat/{sub-oxfordFmrib06_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz => sub-oxfordFmrib06_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-oxfordFmrib06/anat/{sub-oxfordFmrib06_flip-2_mt-off_space-other_MTS_seg-manual.json => sub-oxfordFmrib06_flip-2_mt-off_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-oxfordFmrib06/anat/{sub-oxfordFmrib06_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz => sub-oxfordFmrib06_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-oxfordFmrib06/anat/{sub-oxfordFmrib06_space-other_T1w_seg-manual.json => sub-oxfordFmrib06_space-other_T1w_label-SC_seg.json} (100%) rename derivatives/labels/sub-oxfordFmrib06/anat/{sub-oxfordFmrib06_space-other_T1w_seg-manual.nii.gz => sub-oxfordFmrib06_space-other_T1w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-oxfordFmrib06/anat/{sub-oxfordFmrib06_space-other_T1w_labels-disc-manual.json => sub-oxfordFmrib06_space-other_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-oxfordFmrib06/anat/{sub-oxfordFmrib06_space-other_T1w_labels-disc-manual.nii.gz => sub-oxfordFmrib06_space-other_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-oxfordFmrib06/anat/{sub-oxfordFmrib06_space-other_T2star_seg-manual.json => sub-oxfordFmrib06_space-other_T2star_label-SC_seg.json} (100%) rename derivatives/labels/sub-oxfordFmrib06/anat/{sub-oxfordFmrib06_space-other_T2star_seg-manual.nii.gz => sub-oxfordFmrib06_space-other_T2star_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-oxfordFmrib06/anat/{sub-oxfordFmrib06_space-other_T2w_seg-manual.json => sub-oxfordFmrib06_space-other_T2w_label-SC_seg.json} (100%) rename derivatives/labels/sub-oxfordFmrib06/anat/{sub-oxfordFmrib06_space-other_T2w_seg-manual.nii.gz => sub-oxfordFmrib06_space-other_T2w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-oxfordFmrib06/anat/{sub-oxfordFmrib06_space-other_T2w_labels-disc-manual.json => sub-oxfordFmrib06_space-other_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-oxfordFmrib06/anat/{sub-oxfordFmrib06_space-other_T2w_labels-disc-manual.nii.gz => sub-oxfordFmrib06_space-other_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-oxfordFmrib06/dwi/{sub-oxfordFmrib06_rec-average_dwi_seg-manual.json => sub-oxfordFmrib06_rec-average_dwi_label-SC_seg.json} (100%) rename derivatives/labels/sub-oxfordFmrib06/dwi/{sub-oxfordFmrib06_rec-average_dwi_seg-manual.nii.gz => sub-oxfordFmrib06_rec-average_dwi_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-oxfordFmrib07/anat/{sub-oxfordFmrib07_flip-1_mt-on_space-other_MTS_seg-manual.json => sub-oxfordFmrib07_flip-1_mt-on_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-oxfordFmrib07/anat/{sub-oxfordFmrib07_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz => sub-oxfordFmrib07_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-oxfordFmrib07/anat/{sub-oxfordFmrib07_flip-2_mt-off_space-other_MTS_seg-manual.json => sub-oxfordFmrib07_flip-2_mt-off_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-oxfordFmrib07/anat/{sub-oxfordFmrib07_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz => sub-oxfordFmrib07_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-oxfordFmrib07/anat/{sub-oxfordFmrib07_space-other_T1w_seg-manual.json => sub-oxfordFmrib07_space-other_T1w_label-SC_seg.json} (100%) rename derivatives/labels/sub-oxfordFmrib07/anat/{sub-oxfordFmrib07_space-other_T1w_seg-manual.nii.gz => sub-oxfordFmrib07_space-other_T1w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-oxfordFmrib07/anat/{sub-oxfordFmrib07_space-other_T1w_labels-disc-manual.json => sub-oxfordFmrib07_space-other_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-oxfordFmrib07/anat/{sub-oxfordFmrib07_space-other_T1w_labels-disc-manual.nii.gz => sub-oxfordFmrib07_space-other_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-oxfordFmrib07/anat/{sub-oxfordFmrib07_space-other_T2star_seg-manual.json => sub-oxfordFmrib07_space-other_T2star_label-SC_seg.json} (100%) rename derivatives/labels/sub-oxfordFmrib07/anat/{sub-oxfordFmrib07_space-other_T2star_seg-manual.nii.gz => sub-oxfordFmrib07_space-other_T2star_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-oxfordFmrib07/anat/{sub-oxfordFmrib07_space-other_T2w_seg-manual.json => sub-oxfordFmrib07_space-other_T2w_label-SC_seg.json} (100%) rename derivatives/labels/sub-oxfordFmrib07/anat/{sub-oxfordFmrib07_space-other_T2w_seg-manual.nii.gz => sub-oxfordFmrib07_space-other_T2w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-oxfordFmrib07/anat/{sub-oxfordFmrib07_space-other_T2w_labels-disc-manual.json => sub-oxfordFmrib07_space-other_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-oxfordFmrib07/anat/{sub-oxfordFmrib07_space-other_T2w_labels-disc-manual.nii.gz => sub-oxfordFmrib07_space-other_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-oxfordFmrib07/dwi/{sub-oxfordFmrib07_rec-average_dwi_seg-manual.json => sub-oxfordFmrib07_rec-average_dwi_label-SC_seg.json} (100%) rename derivatives/labels/sub-oxfordFmrib07/dwi/{sub-oxfordFmrib07_rec-average_dwi_seg-manual.nii.gz => sub-oxfordFmrib07_rec-average_dwi_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-oxfordFmrib08/anat/{sub-oxfordFmrib08_flip-1_mt-on_space-other_MTS_seg-manual.json => sub-oxfordFmrib08_flip-1_mt-on_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-oxfordFmrib08/anat/{sub-oxfordFmrib08_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz => sub-oxfordFmrib08_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-oxfordFmrib08/anat/{sub-oxfordFmrib08_flip-2_mt-off_space-other_MTS_seg-manual.json => sub-oxfordFmrib08_flip-2_mt-off_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-oxfordFmrib08/anat/{sub-oxfordFmrib08_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz => sub-oxfordFmrib08_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-oxfordFmrib08/anat/{sub-oxfordFmrib08_space-other_T1w_seg-manual.json => sub-oxfordFmrib08_space-other_T1w_label-SC_seg.json} (100%) rename derivatives/labels/sub-oxfordFmrib08/anat/{sub-oxfordFmrib08_space-other_T1w_seg-manual.nii.gz => sub-oxfordFmrib08_space-other_T1w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-oxfordFmrib08/anat/{sub-oxfordFmrib08_space-other_T1w_labels-disc-manual.json => sub-oxfordFmrib08_space-other_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-oxfordFmrib08/anat/{sub-oxfordFmrib08_space-other_T1w_labels-disc-manual.nii.gz => sub-oxfordFmrib08_space-other_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-oxfordFmrib08/anat/{sub-oxfordFmrib08_space-other_T2star_seg-manual.json => sub-oxfordFmrib08_space-other_T2star_label-SC_seg.json} (100%) rename derivatives/labels/sub-oxfordFmrib08/anat/{sub-oxfordFmrib08_space-other_T2star_seg-manual.nii.gz => sub-oxfordFmrib08_space-other_T2star_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-oxfordFmrib08/anat/{sub-oxfordFmrib08_space-other_T2w_seg-manual.json => sub-oxfordFmrib08_space-other_T2w_label-SC_seg.json} (100%) rename derivatives/labels/sub-oxfordFmrib08/anat/{sub-oxfordFmrib08_space-other_T2w_seg-manual.nii.gz => sub-oxfordFmrib08_space-other_T2w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-oxfordFmrib08/anat/{sub-oxfordFmrib08_space-other_T2w_labels-disc-manual.json => sub-oxfordFmrib08_space-other_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-oxfordFmrib08/anat/{sub-oxfordFmrib08_space-other_T2w_labels-disc-manual.nii.gz => sub-oxfordFmrib08_space-other_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-oxfordFmrib08/dwi/{sub-oxfordFmrib08_rec-average_dwi_seg-manual.json => sub-oxfordFmrib08_rec-average_dwi_label-SC_seg.json} (100%) rename derivatives/labels/sub-oxfordFmrib08/dwi/{sub-oxfordFmrib08_rec-average_dwi_seg-manual.nii.gz => sub-oxfordFmrib08_rec-average_dwi_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-oxfordFmrib09/anat/{sub-oxfordFmrib09_flip-1_mt-on_space-other_MTS_seg-manual.json => sub-oxfordFmrib09_flip-1_mt-on_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-oxfordFmrib09/anat/{sub-oxfordFmrib09_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz => sub-oxfordFmrib09_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-oxfordFmrib09/anat/{sub-oxfordFmrib09_flip-2_mt-off_space-other_MTS_seg-manual.json => sub-oxfordFmrib09_flip-2_mt-off_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-oxfordFmrib09/anat/{sub-oxfordFmrib09_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz => sub-oxfordFmrib09_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-oxfordFmrib09/anat/{sub-oxfordFmrib09_space-other_T1w_seg-manual.json => sub-oxfordFmrib09_space-other_T1w_label-SC_seg.json} (100%) rename derivatives/labels/sub-oxfordFmrib09/anat/{sub-oxfordFmrib09_space-other_T1w_seg-manual.nii.gz => sub-oxfordFmrib09_space-other_T1w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-oxfordFmrib09/anat/{sub-oxfordFmrib09_space-other_T1w_labels-disc-manual.json => sub-oxfordFmrib09_space-other_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-oxfordFmrib09/anat/{sub-oxfordFmrib09_space-other_T1w_labels-disc-manual.nii.gz => sub-oxfordFmrib09_space-other_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-oxfordFmrib09/anat/{sub-oxfordFmrib09_space-other_T2star_seg-manual.json => sub-oxfordFmrib09_space-other_T2star_label-SC_seg.json} (100%) rename derivatives/labels/sub-oxfordFmrib09/anat/{sub-oxfordFmrib09_space-other_T2star_seg-manual.nii.gz => sub-oxfordFmrib09_space-other_T2star_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-oxfordFmrib09/anat/{sub-oxfordFmrib09_space-other_T2w_seg-manual.json => sub-oxfordFmrib09_space-other_T2w_label-SC_seg.json} (100%) rename derivatives/labels/sub-oxfordFmrib09/anat/{sub-oxfordFmrib09_space-other_T2w_seg-manual.nii.gz => sub-oxfordFmrib09_space-other_T2w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-oxfordFmrib09/anat/{sub-oxfordFmrib09_space-other_T2w_labels-disc-manual.json => sub-oxfordFmrib09_space-other_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-oxfordFmrib09/anat/{sub-oxfordFmrib09_space-other_T2w_labels-disc-manual.nii.gz => sub-oxfordFmrib09_space-other_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-oxfordFmrib09/dwi/{sub-oxfordFmrib09_rec-average_dwi_seg-manual.json => sub-oxfordFmrib09_rec-average_dwi_label-SC_seg.json} (100%) rename derivatives/labels/sub-oxfordFmrib09/dwi/{sub-oxfordFmrib09_rec-average_dwi_seg-manual.nii.gz => sub-oxfordFmrib09_rec-average_dwi_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-oxfordFmrib10/anat/{sub-oxfordFmrib10_flip-1_mt-on_space-other_MTS_seg-manual.json => sub-oxfordFmrib10_flip-1_mt-on_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-oxfordFmrib10/anat/{sub-oxfordFmrib10_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz => sub-oxfordFmrib10_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-oxfordFmrib10/anat/{sub-oxfordFmrib10_flip-2_mt-off_space-other_MTS_seg-manual.json => sub-oxfordFmrib10_flip-2_mt-off_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-oxfordFmrib10/anat/{sub-oxfordFmrib10_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz => sub-oxfordFmrib10_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-oxfordFmrib10/anat/{sub-oxfordFmrib10_space-other_T1w_seg-manual.json => sub-oxfordFmrib10_space-other_T1w_label-SC_seg.json} (100%) rename derivatives/labels/sub-oxfordFmrib10/anat/{sub-oxfordFmrib10_space-other_T1w_seg-manual.nii.gz => sub-oxfordFmrib10_space-other_T1w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-oxfordFmrib10/anat/{sub-oxfordFmrib10_space-other_T1w_labels-disc-manual.json => sub-oxfordFmrib10_space-other_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-oxfordFmrib10/anat/{sub-oxfordFmrib10_space-other_T1w_labels-disc-manual.nii.gz => sub-oxfordFmrib10_space-other_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-oxfordFmrib10/anat/{sub-oxfordFmrib10_space-other_T2star_seg-manual.json => sub-oxfordFmrib10_space-other_T2star_label-SC_seg.json} (100%) rename derivatives/labels/sub-oxfordFmrib10/anat/{sub-oxfordFmrib10_space-other_T2star_seg-manual.nii.gz => sub-oxfordFmrib10_space-other_T2star_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-oxfordFmrib10/anat/{sub-oxfordFmrib10_space-other_T2w_seg-manual.json => sub-oxfordFmrib10_space-other_T2w_label-SC_seg.json} (100%) rename derivatives/labels/sub-oxfordFmrib10/anat/{sub-oxfordFmrib10_space-other_T2w_seg-manual.nii.gz => sub-oxfordFmrib10_space-other_T2w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-oxfordFmrib10/anat/{sub-oxfordFmrib10_space-other_T2w_labels-disc-manual.json => sub-oxfordFmrib10_space-other_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-oxfordFmrib10/anat/{sub-oxfordFmrib10_space-other_T2w_labels-disc-manual.nii.gz => sub-oxfordFmrib10_space-other_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-oxfordFmrib10/dwi/{sub-oxfordFmrib10_rec-average_dwi_seg-manual.json => sub-oxfordFmrib10_rec-average_dwi_label-SC_seg.json} (100%) rename derivatives/labels/sub-oxfordFmrib10/dwi/{sub-oxfordFmrib10_rec-average_dwi_seg-manual.nii.gz => sub-oxfordFmrib10_rec-average_dwi_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-oxfordFmrib11/anat/{sub-oxfordFmrib11_flip-1_mt-on_space-other_MTS_seg-manual.json => sub-oxfordFmrib11_flip-1_mt-on_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-oxfordFmrib11/anat/{sub-oxfordFmrib11_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz => sub-oxfordFmrib11_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-oxfordFmrib11/anat/{sub-oxfordFmrib11_flip-2_mt-off_space-other_MTS_seg-manual.json => sub-oxfordFmrib11_flip-2_mt-off_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-oxfordFmrib11/anat/{sub-oxfordFmrib11_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz => sub-oxfordFmrib11_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-oxfordFmrib11/anat/{sub-oxfordFmrib11_space-other_T1w_seg-manual.json => sub-oxfordFmrib11_space-other_T1w_label-SC_seg.json} (100%) rename derivatives/labels/sub-oxfordFmrib11/anat/{sub-oxfordFmrib11_space-other_T1w_seg-manual.nii.gz => sub-oxfordFmrib11_space-other_T1w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-oxfordFmrib11/anat/{sub-oxfordFmrib11_space-other_T1w_labels-disc-manual.json => sub-oxfordFmrib11_space-other_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-oxfordFmrib11/anat/{sub-oxfordFmrib11_space-other_T1w_labels-disc-manual.nii.gz => sub-oxfordFmrib11_space-other_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-oxfordFmrib11/anat/{sub-oxfordFmrib11_space-other_T2star_seg-manual.json => sub-oxfordFmrib11_space-other_T2star_label-SC_seg.json} (100%) rename derivatives/labels/sub-oxfordFmrib11/anat/{sub-oxfordFmrib11_space-other_T2star_seg-manual.nii.gz => sub-oxfordFmrib11_space-other_T2star_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-oxfordFmrib11/anat/{sub-oxfordFmrib11_space-other_T2w_seg-manual.json => sub-oxfordFmrib11_space-other_T2w_label-SC_seg.json} (100%) rename derivatives/labels/sub-oxfordFmrib11/anat/{sub-oxfordFmrib11_space-other_T2w_seg-manual.nii.gz => sub-oxfordFmrib11_space-other_T2w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-oxfordFmrib11/anat/{sub-oxfordFmrib11_space-other_T2w_labels-disc-manual.json => sub-oxfordFmrib11_space-other_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-oxfordFmrib11/anat/{sub-oxfordFmrib11_space-other_T2w_labels-disc-manual.nii.gz => sub-oxfordFmrib11_space-other_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-oxfordFmrib11/dwi/{sub-oxfordFmrib11_rec-average_dwi_seg-manual.json => sub-oxfordFmrib11_rec-average_dwi_label-SC_seg.json} (100%) rename derivatives/labels/sub-oxfordFmrib11/dwi/{sub-oxfordFmrib11_rec-average_dwi_seg-manual.nii.gz => sub-oxfordFmrib11_rec-average_dwi_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-oxfordOhba01/anat/{sub-oxfordOhba01_flip-1_mt-on_space-other_MTS_seg-manual.json => sub-oxfordOhba01_flip-1_mt-on_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-oxfordOhba01/anat/{sub-oxfordOhba01_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz => sub-oxfordOhba01_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-oxfordOhba01/anat/{sub-oxfordOhba01_flip-2_mt-off_space-other_MTS_seg-manual.json => sub-oxfordOhba01_flip-2_mt-off_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-oxfordOhba01/anat/{sub-oxfordOhba01_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz => sub-oxfordOhba01_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-oxfordOhba01/anat/{sub-oxfordOhba01_space-other_T1w_seg-manual.json => sub-oxfordOhba01_space-other_T1w_label-SC_seg.json} (100%) rename derivatives/labels/sub-oxfordOhba01/anat/{sub-oxfordOhba01_space-other_T1w_seg-manual.nii.gz => sub-oxfordOhba01_space-other_T1w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-oxfordOhba01/anat/{sub-oxfordOhba01_space-other_T1w_labels-disc-manual.json => sub-oxfordOhba01_space-other_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-oxfordOhba01/anat/{sub-oxfordOhba01_space-other_T1w_labels-disc-manual.nii.gz => sub-oxfordOhba01_space-other_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-oxfordOhba01/anat/{sub-oxfordOhba01_space-other_T2star_seg-manual.json => sub-oxfordOhba01_space-other_T2star_label-SC_seg.json} (100%) rename derivatives/labels/sub-oxfordOhba01/anat/{sub-oxfordOhba01_space-other_T2star_seg-manual.nii.gz => sub-oxfordOhba01_space-other_T2star_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-oxfordOhba01/anat/{sub-oxfordOhba01_space-other_T2w_seg-manual.json => sub-oxfordOhba01_space-other_T2w_label-SC_seg.json} (100%) rename derivatives/labels/sub-oxfordOhba01/anat/{sub-oxfordOhba01_space-other_T2w_seg-manual.nii.gz => sub-oxfordOhba01_space-other_T2w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-oxfordOhba01/anat/{sub-oxfordOhba01_space-other_T2w_labels-disc-manual.json => sub-oxfordOhba01_space-other_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-oxfordOhba01/anat/{sub-oxfordOhba01_space-other_T2w_labels-disc-manual.nii.gz => sub-oxfordOhba01_space-other_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-oxfordOhba01/dwi/{sub-oxfordOhba01_rec-average_dwi_seg-manual.json => sub-oxfordOhba01_rec-average_dwi_label-SC_seg.json} (100%) rename derivatives/labels/sub-oxfordOhba01/dwi/{sub-oxfordOhba01_rec-average_dwi_seg-manual.nii.gz => sub-oxfordOhba01_rec-average_dwi_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-oxfordOhba02/anat/{sub-oxfordOhba02_flip-1_mt-on_space-other_MTS_seg-manual.json => sub-oxfordOhba02_flip-1_mt-on_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-oxfordOhba02/anat/{sub-oxfordOhba02_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz => sub-oxfordOhba02_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-oxfordOhba02/anat/{sub-oxfordOhba02_flip-2_mt-off_space-other_MTS_seg-manual.json => sub-oxfordOhba02_flip-2_mt-off_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-oxfordOhba02/anat/{sub-oxfordOhba02_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz => sub-oxfordOhba02_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-oxfordOhba02/anat/{sub-oxfordOhba02_space-other_T1w_seg-manual.json => sub-oxfordOhba02_space-other_T1w_label-SC_seg.json} (100%) rename derivatives/labels/sub-oxfordOhba02/anat/{sub-oxfordOhba02_space-other_T1w_seg-manual.nii.gz => sub-oxfordOhba02_space-other_T1w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-oxfordOhba02/anat/{sub-oxfordOhba02_space-other_T1w_labels-disc-manual.json => sub-oxfordOhba02_space-other_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-oxfordOhba02/anat/{sub-oxfordOhba02_space-other_T1w_labels-disc-manual.nii.gz => sub-oxfordOhba02_space-other_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-oxfordOhba02/anat/{sub-oxfordOhba02_space-other_T2star_seg-manual.json => sub-oxfordOhba02_space-other_T2star_label-SC_seg.json} (100%) rename derivatives/labels/sub-oxfordOhba02/anat/{sub-oxfordOhba02_space-other_T2star_seg-manual.nii.gz => sub-oxfordOhba02_space-other_T2star_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-oxfordOhba02/anat/{sub-oxfordOhba02_space-other_T2w_seg-manual.json => sub-oxfordOhba02_space-other_T2w_label-SC_seg.json} (100%) rename derivatives/labels/sub-oxfordOhba02/anat/{sub-oxfordOhba02_space-other_T2w_seg-manual.nii.gz => sub-oxfordOhba02_space-other_T2w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-oxfordOhba02/anat/{sub-oxfordOhba02_space-other_T2w_labels-disc-manual.json => sub-oxfordOhba02_space-other_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-oxfordOhba02/anat/{sub-oxfordOhba02_space-other_T2w_labels-disc-manual.nii.gz => sub-oxfordOhba02_space-other_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-oxfordOhba03/anat/{sub-oxfordOhba03_flip-1_mt-on_space-other_MTS_seg-manual.json => sub-oxfordOhba03_flip-1_mt-on_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-oxfordOhba03/anat/{sub-oxfordOhba03_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz => sub-oxfordOhba03_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-oxfordOhba03/anat/{sub-oxfordOhba03_flip-2_mt-off_space-other_MTS_seg-manual.json => sub-oxfordOhba03_flip-2_mt-off_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-oxfordOhba03/anat/{sub-oxfordOhba03_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz => sub-oxfordOhba03_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-oxfordOhba03/anat/{sub-oxfordOhba03_space-other_T1w_seg-manual.json => sub-oxfordOhba03_space-other_T1w_label-SC_seg.json} (100%) rename derivatives/labels/sub-oxfordOhba03/anat/{sub-oxfordOhba03_space-other_T1w_seg-manual.nii.gz => sub-oxfordOhba03_space-other_T1w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-oxfordOhba03/anat/{sub-oxfordOhba03_space-other_T1w_labels-disc-manual.json => sub-oxfordOhba03_space-other_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-oxfordOhba03/anat/{sub-oxfordOhba03_space-other_T1w_labels-disc-manual.nii.gz => sub-oxfordOhba03_space-other_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-oxfordOhba03/anat/{sub-oxfordOhba03_space-other_T2star_seg-manual.json => sub-oxfordOhba03_space-other_T2star_label-SC_seg.json} (100%) rename derivatives/labels/sub-oxfordOhba03/anat/{sub-oxfordOhba03_space-other_T2star_seg-manual.nii.gz => sub-oxfordOhba03_space-other_T2star_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-oxfordOhba03/anat/{sub-oxfordOhba03_space-other_T2w_seg-manual.json => sub-oxfordOhba03_space-other_T2w_label-SC_seg.json} (100%) rename derivatives/labels/sub-oxfordOhba03/anat/{sub-oxfordOhba03_space-other_T2w_seg-manual.nii.gz => sub-oxfordOhba03_space-other_T2w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-oxfordOhba03/anat/{sub-oxfordOhba03_space-other_T2w_labels-disc-manual.json => sub-oxfordOhba03_space-other_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-oxfordOhba03/anat/{sub-oxfordOhba03_space-other_T2w_labels-disc-manual.nii.gz => sub-oxfordOhba03_space-other_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-oxfordOhba03/dwi/{sub-oxfordOhba03_rec-average_dwi_seg-manual.json => sub-oxfordOhba03_rec-average_dwi_label-SC_seg.json} (100%) rename derivatives/labels/sub-oxfordOhba03/dwi/{sub-oxfordOhba03_rec-average_dwi_seg-manual.nii.gz => sub-oxfordOhba03_rec-average_dwi_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-oxfordOhba04/anat/{sub-oxfordOhba04_flip-1_mt-on_space-other_MTS_seg-manual.json => sub-oxfordOhba04_flip-1_mt-on_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-oxfordOhba04/anat/{sub-oxfordOhba04_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz => sub-oxfordOhba04_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-oxfordOhba04/anat/{sub-oxfordOhba04_flip-2_mt-off_space-other_MTS_seg-manual.json => sub-oxfordOhba04_flip-2_mt-off_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-oxfordOhba04/anat/{sub-oxfordOhba04_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz => sub-oxfordOhba04_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-oxfordOhba04/anat/{sub-oxfordOhba04_space-other_T1w_seg-manual.json => sub-oxfordOhba04_space-other_T1w_label-SC_seg.json} (100%) rename derivatives/labels/sub-oxfordOhba04/anat/{sub-oxfordOhba04_space-other_T1w_seg-manual.nii.gz => sub-oxfordOhba04_space-other_T1w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-oxfordOhba04/anat/{sub-oxfordOhba04_space-other_T1w_labels-disc-manual.json => sub-oxfordOhba04_space-other_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-oxfordOhba04/anat/{sub-oxfordOhba04_space-other_T1w_labels-disc-manual.nii.gz => sub-oxfordOhba04_space-other_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-oxfordOhba04/anat/{sub-oxfordOhba04_space-other_T2star_seg-manual.json => sub-oxfordOhba04_space-other_T2star_label-SC_seg.json} (100%) rename derivatives/labels/sub-oxfordOhba04/anat/{sub-oxfordOhba04_space-other_T2star_seg-manual.nii.gz => sub-oxfordOhba04_space-other_T2star_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-oxfordOhba04/anat/{sub-oxfordOhba04_space-other_T2w_seg-manual.json => sub-oxfordOhba04_space-other_T2w_label-SC_seg.json} (100%) rename derivatives/labels/sub-oxfordOhba04/anat/{sub-oxfordOhba04_space-other_T2w_seg-manual.nii.gz => sub-oxfordOhba04_space-other_T2w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-oxfordOhba04/anat/{sub-oxfordOhba04_space-other_T2w_labels-disc-manual.json => sub-oxfordOhba04_space-other_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-oxfordOhba04/anat/{sub-oxfordOhba04_space-other_T2w_labels-disc-manual.nii.gz => sub-oxfordOhba04_space-other_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-oxfordOhba04/dwi/{sub-oxfordOhba04_rec-average_dwi_seg-manual.json => sub-oxfordOhba04_rec-average_dwi_label-SC_seg.json} (100%) rename derivatives/labels/sub-oxfordOhba04/dwi/{sub-oxfordOhba04_rec-average_dwi_seg-manual.nii.gz => sub-oxfordOhba04_rec-average_dwi_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-oxfordOhba05/anat/{sub-oxfordOhba05_flip-1_mt-on_space-other_MTS_seg-manual.json => sub-oxfordOhba05_flip-1_mt-on_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-oxfordOhba05/anat/{sub-oxfordOhba05_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz => sub-oxfordOhba05_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-oxfordOhba05/anat/{sub-oxfordOhba05_flip-2_mt-off_space-other_MTS_seg-manual.json => sub-oxfordOhba05_flip-2_mt-off_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-oxfordOhba05/anat/{sub-oxfordOhba05_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz => sub-oxfordOhba05_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-oxfordOhba05/anat/{sub-oxfordOhba05_space-other_T1w_seg-manual.json => sub-oxfordOhba05_space-other_T1w_label-SC_seg.json} (100%) rename derivatives/labels/sub-oxfordOhba05/anat/{sub-oxfordOhba05_space-other_T1w_seg-manual.nii.gz => sub-oxfordOhba05_space-other_T1w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-oxfordOhba05/anat/{sub-oxfordOhba05_space-other_T1w_labels-disc-manual.json => sub-oxfordOhba05_space-other_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-oxfordOhba05/anat/{sub-oxfordOhba05_space-other_T1w_labels-disc-manual.nii.gz => sub-oxfordOhba05_space-other_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-oxfordOhba05/anat/{sub-oxfordOhba05_space-other_T2star_seg-manual.json => sub-oxfordOhba05_space-other_T2star_label-SC_seg.json} (100%) rename derivatives/labels/sub-oxfordOhba05/anat/{sub-oxfordOhba05_space-other_T2star_seg-manual.nii.gz => sub-oxfordOhba05_space-other_T2star_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-oxfordOhba05/anat/{sub-oxfordOhba05_space-other_T2w_seg-manual.json => sub-oxfordOhba05_space-other_T2w_label-SC_seg.json} (100%) rename derivatives/labels/sub-oxfordOhba05/anat/{sub-oxfordOhba05_space-other_T2w_seg-manual.nii.gz => sub-oxfordOhba05_space-other_T2w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-oxfordOhba05/anat/{sub-oxfordOhba05_space-other_T2w_labels-disc-manual.json => sub-oxfordOhba05_space-other_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-oxfordOhba05/anat/{sub-oxfordOhba05_space-other_T2w_labels-disc-manual.nii.gz => sub-oxfordOhba05_space-other_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-oxfordOhba05/dwi/{sub-oxfordOhba05_rec-average_dwi_seg-manual.json => sub-oxfordOhba05_rec-average_dwi_label-SC_seg.json} (100%) rename derivatives/labels/sub-oxfordOhba05/dwi/{sub-oxfordOhba05_rec-average_dwi_seg-manual.nii.gz => sub-oxfordOhba05_rec-average_dwi_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-pavia01/anat/{sub-pavia01_flip-1_mt-on_space-other_MTS_seg-manual.json => sub-pavia01_flip-1_mt-on_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-pavia01/anat/{sub-pavia01_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz => sub-pavia01_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-pavia01/anat/{sub-pavia01_flip-2_mt-off_space-other_MTS_seg-manual.json => sub-pavia01_flip-2_mt-off_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-pavia01/anat/{sub-pavia01_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz => sub-pavia01_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-pavia01/anat/{sub-pavia01_space-other_T1w_seg-manual.json => sub-pavia01_space-other_T1w_label-SC_seg.json} (100%) rename derivatives/labels/sub-pavia01/anat/{sub-pavia01_space-other_T1w_seg-manual.nii.gz => sub-pavia01_space-other_T1w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-pavia01/anat/{sub-pavia01_space-other_T1w_labels-disc-manual.json => sub-pavia01_space-other_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-pavia01/anat/{sub-pavia01_space-other_T1w_labels-disc-manual.nii.gz => sub-pavia01_space-other_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-pavia01/anat/{sub-pavia01_space-other_T2star_seg-manual.json => sub-pavia01_space-other_T2star_label-SC_seg.json} (100%) rename derivatives/labels/sub-pavia01/anat/{sub-pavia01_space-other_T2star_seg-manual.nii.gz => sub-pavia01_space-other_T2star_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-pavia01/anat/{sub-pavia01_space-other_T2w_seg-manual.json => sub-pavia01_space-other_T2w_label-SC_seg.json} (100%) rename derivatives/labels/sub-pavia01/anat/{sub-pavia01_space-other_T2w_seg-manual.nii.gz => sub-pavia01_space-other_T2w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-pavia01/anat/{sub-pavia01_space-other_T2w_labels-disc-manual.json => sub-pavia01_space-other_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-pavia01/anat/{sub-pavia01_space-other_T2w_labels-disc-manual.nii.gz => sub-pavia01_space-other_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-pavia01/dwi/{sub-pavia01_rec-average_dwi_seg-manual.json => sub-pavia01_rec-average_dwi_label-SC_seg.json} (100%) rename derivatives/labels/sub-pavia01/dwi/{sub-pavia01_rec-average_dwi_seg-manual.nii.gz => sub-pavia01_rec-average_dwi_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-pavia02/anat/{sub-pavia02_flip-1_mt-on_space-other_MTS_seg-manual.json => sub-pavia02_flip-1_mt-on_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-pavia02/anat/{sub-pavia02_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz => sub-pavia02_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-pavia02/anat/{sub-pavia02_flip-2_mt-off_space-other_MTS_seg-manual.json => sub-pavia02_flip-2_mt-off_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-pavia02/anat/{sub-pavia02_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz => sub-pavia02_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-pavia02/anat/{sub-pavia02_space-other_T1w_seg-manual.json => sub-pavia02_space-other_T1w_label-SC_seg.json} (100%) rename derivatives/labels/sub-pavia02/anat/{sub-pavia02_space-other_T1w_seg-manual.nii.gz => sub-pavia02_space-other_T1w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-pavia02/anat/{sub-pavia02_space-other_T1w_labels-disc-manual.json => sub-pavia02_space-other_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-pavia02/anat/{sub-pavia02_space-other_T1w_labels-disc-manual.nii.gz => sub-pavia02_space-other_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-pavia02/anat/{sub-pavia02_space-other_T2star_seg-manual.json => sub-pavia02_space-other_T2star_label-SC_seg.json} (100%) rename derivatives/labels/sub-pavia02/anat/{sub-pavia02_space-other_T2star_seg-manual.nii.gz => sub-pavia02_space-other_T2star_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-pavia02/anat/{sub-pavia02_space-other_T2w_seg-manual.json => sub-pavia02_space-other_T2w_label-SC_seg.json} (100%) rename derivatives/labels/sub-pavia02/anat/{sub-pavia02_space-other_T2w_seg-manual.nii.gz => sub-pavia02_space-other_T2w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-pavia02/anat/{sub-pavia02_space-other_T2w_labels-disc-manual.json => sub-pavia02_space-other_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-pavia02/anat/{sub-pavia02_space-other_T2w_labels-disc-manual.nii.gz => sub-pavia02_space-other_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-pavia02/dwi/{sub-pavia02_rec-average_dwi_seg-manual.json => sub-pavia02_rec-average_dwi_label-SC_seg.json} (100%) rename derivatives/labels/sub-pavia02/dwi/{sub-pavia02_rec-average_dwi_seg-manual.nii.gz => sub-pavia02_rec-average_dwi_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-pavia03/anat/{sub-pavia03_flip-1_mt-on_space-other_MTS_seg-manual.json => sub-pavia03_flip-1_mt-on_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-pavia03/anat/{sub-pavia03_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz => sub-pavia03_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-pavia03/anat/{sub-pavia03_flip-2_mt-off_space-other_MTS_seg-manual.json => sub-pavia03_flip-2_mt-off_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-pavia03/anat/{sub-pavia03_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz => sub-pavia03_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-pavia03/anat/{sub-pavia03_space-other_T1w_seg-manual.json => sub-pavia03_space-other_T1w_label-SC_seg.json} (100%) rename derivatives/labels/sub-pavia03/anat/{sub-pavia03_space-other_T1w_seg-manual.nii.gz => sub-pavia03_space-other_T1w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-pavia03/anat/{sub-pavia03_space-other_T1w_labels-disc-manual.json => sub-pavia03_space-other_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-pavia03/anat/{sub-pavia03_space-other_T1w_labels-disc-manual.nii.gz => sub-pavia03_space-other_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-pavia03/anat/{sub-pavia03_space-other_T2star_seg-manual.json => sub-pavia03_space-other_T2star_label-SC_seg.json} (100%) rename derivatives/labels/sub-pavia03/anat/{sub-pavia03_space-other_T2star_seg-manual.nii.gz => sub-pavia03_space-other_T2star_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-pavia03/anat/{sub-pavia03_space-other_T2w_seg-manual.json => sub-pavia03_space-other_T2w_label-SC_seg.json} (100%) rename derivatives/labels/sub-pavia03/anat/{sub-pavia03_space-other_T2w_seg-manual.nii.gz => sub-pavia03_space-other_T2w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-pavia03/anat/{sub-pavia03_space-other_T2w_labels-disc-manual.json => sub-pavia03_space-other_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-pavia03/anat/{sub-pavia03_space-other_T2w_labels-disc-manual.nii.gz => sub-pavia03_space-other_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-pavia03/dwi/{sub-pavia03_rec-average_dwi_seg-manual.json => sub-pavia03_rec-average_dwi_label-SC_seg.json} (100%) rename derivatives/labels/sub-pavia03/dwi/{sub-pavia03_rec-average_dwi_seg-manual.nii.gz => sub-pavia03_rec-average_dwi_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-pavia04/anat/{sub-pavia04_flip-1_mt-on_space-other_MTS_seg-manual.json => sub-pavia04_flip-1_mt-on_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-pavia04/anat/{sub-pavia04_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz => sub-pavia04_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-pavia04/anat/{sub-pavia04_flip-2_mt-off_space-other_MTS_seg-manual.json => sub-pavia04_flip-2_mt-off_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-pavia04/anat/{sub-pavia04_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz => sub-pavia04_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-pavia04/anat/{sub-pavia04_space-other_T1w_seg-manual.json => sub-pavia04_space-other_T1w_label-SC_seg.json} (100%) rename derivatives/labels/sub-pavia04/anat/{sub-pavia04_space-other_T1w_seg-manual.nii.gz => sub-pavia04_space-other_T1w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-pavia04/anat/{sub-pavia04_space-other_T1w_labels-disc-manual.json => sub-pavia04_space-other_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-pavia04/anat/{sub-pavia04_space-other_T1w_labels-disc-manual.nii.gz => sub-pavia04_space-other_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-pavia04/anat/{sub-pavia04_space-other_T2star_seg-manual.json => sub-pavia04_space-other_T2star_label-SC_seg.json} (100%) rename derivatives/labels/sub-pavia04/anat/{sub-pavia04_space-other_T2star_seg-manual.nii.gz => sub-pavia04_space-other_T2star_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-pavia04/anat/{sub-pavia04_space-other_T2w_csfseg-manual.json => sub-pavia04_space-other_T2w_csflabel-SC_seg.json} (100%) rename derivatives/labels/sub-pavia04/anat/{sub-pavia04_space-other_T2w_csfseg-manual.nii.gz => sub-pavia04_space-other_T2w_csflabel-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-pavia04/anat/{sub-pavia04_space-other_T2w_seg-manual.json => sub-pavia04_space-other_T2w_label-SC_seg.json} (100%) rename derivatives/labels/sub-pavia04/anat/{sub-pavia04_space-other_T2w_seg-manual.nii.gz => sub-pavia04_space-other_T2w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-pavia04/anat/{sub-pavia04_space-other_T2w_labels-disc-manual.json => sub-pavia04_space-other_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-pavia04/anat/{sub-pavia04_space-other_T2w_labels-disc-manual.nii.gz => sub-pavia04_space-other_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-pavia04/dwi/{sub-pavia04_rec-average_dwi_seg-manual.json => sub-pavia04_rec-average_dwi_label-SC_seg.json} (100%) rename derivatives/labels/sub-pavia04/dwi/{sub-pavia04_rec-average_dwi_seg-manual.nii.gz => sub-pavia04_rec-average_dwi_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-pavia05/anat/{sub-pavia05_flip-1_mt-on_space-other_MTS_seg-manual.json => sub-pavia05_flip-1_mt-on_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-pavia05/anat/{sub-pavia05_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz => sub-pavia05_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-pavia05/anat/{sub-pavia05_flip-2_mt-off_space-other_MTS_seg-manual.json => sub-pavia05_flip-2_mt-off_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-pavia05/anat/{sub-pavia05_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz => sub-pavia05_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-pavia05/anat/{sub-pavia05_space-other_T1w_seg-manual.json => sub-pavia05_space-other_T1w_label-SC_seg.json} (100%) rename derivatives/labels/sub-pavia05/anat/{sub-pavia05_space-other_T1w_seg-manual.nii.gz => sub-pavia05_space-other_T1w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-pavia05/anat/{sub-pavia05_space-other_T1w_labels-disc-manual.json => sub-pavia05_space-other_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-pavia05/anat/{sub-pavia05_space-other_T1w_labels-disc-manual.nii.gz => sub-pavia05_space-other_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-pavia05/anat/{sub-pavia05_space-other_T2star_seg-manual.json => sub-pavia05_space-other_T2star_label-SC_seg.json} (100%) rename derivatives/labels/sub-pavia05/anat/{sub-pavia05_space-other_T2star_seg-manual.nii.gz => sub-pavia05_space-other_T2star_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-pavia05/anat/{sub-pavia05_space-other_T2w_seg-manual.json => sub-pavia05_space-other_T2w_label-SC_seg.json} (100%) rename derivatives/labels/sub-pavia05/anat/{sub-pavia05_space-other_T2w_seg-manual.nii.gz => sub-pavia05_space-other_T2w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-pavia05/anat/{sub-pavia05_space-other_T2w_labels-disc-manual.json => sub-pavia05_space-other_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-pavia05/anat/{sub-pavia05_space-other_T2w_labels-disc-manual.nii.gz => sub-pavia05_space-other_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-pavia05/dwi/{sub-pavia05_rec-average_dwi_seg-manual.json => sub-pavia05_rec-average_dwi_label-SC_seg.json} (100%) rename derivatives/labels/sub-pavia05/dwi/{sub-pavia05_rec-average_dwi_seg-manual.nii.gz => sub-pavia05_rec-average_dwi_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-pavia06/anat/{sub-pavia06_flip-1_mt-on_space-other_MTS_seg-manual.json => sub-pavia06_flip-1_mt-on_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-pavia06/anat/{sub-pavia06_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz => sub-pavia06_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-pavia06/anat/{sub-pavia06_flip-2_mt-off_space-other_MTS_seg-manual.json => sub-pavia06_flip-2_mt-off_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-pavia06/anat/{sub-pavia06_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz => sub-pavia06_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-pavia06/anat/{sub-pavia06_space-other_T1w_seg-manual.json => sub-pavia06_space-other_T1w_label-SC_seg.json} (100%) rename derivatives/labels/sub-pavia06/anat/{sub-pavia06_space-other_T1w_seg-manual.nii.gz => sub-pavia06_space-other_T1w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-pavia06/anat/{sub-pavia06_space-other_T1w_labels-disc-manual.json => sub-pavia06_space-other_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-pavia06/anat/{sub-pavia06_space-other_T1w_labels-disc-manual.nii.gz => sub-pavia06_space-other_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-pavia06/anat/{sub-pavia06_space-other_T2star_seg-manual.json => sub-pavia06_space-other_T2star_label-SC_seg.json} (100%) rename derivatives/labels/sub-pavia06/anat/{sub-pavia06_space-other_T2star_seg-manual.nii.gz => sub-pavia06_space-other_T2star_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-pavia06/anat/{sub-pavia06_space-other_T2w_seg-manual.json => sub-pavia06_space-other_T2w_label-SC_seg.json} (100%) rename derivatives/labels/sub-pavia06/anat/{sub-pavia06_space-other_T2w_seg-manual.nii.gz => sub-pavia06_space-other_T2w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-pavia06/anat/{sub-pavia06_space-other_T2w_labels-disc-manual.json => sub-pavia06_space-other_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-pavia06/anat/{sub-pavia06_space-other_T2w_labels-disc-manual.nii.gz => sub-pavia06_space-other_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-pavia06/dwi/{sub-pavia06_rec-average_dwi_seg-manual.json => sub-pavia06_rec-average_dwi_label-SC_seg.json} (100%) rename derivatives/labels/sub-pavia06/dwi/{sub-pavia06_rec-average_dwi_seg-manual.nii.gz => sub-pavia06_rec-average_dwi_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-perform01/anat/{sub-perform01_flip-1_mt-on_space-other_MTS_seg-manual.json => sub-perform01_flip-1_mt-on_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-perform01/anat/{sub-perform01_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz => sub-perform01_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-perform01/anat/{sub-perform01_flip-2_mt-off_space-other_MTS_seg-manual.json => sub-perform01_flip-2_mt-off_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-perform01/anat/{sub-perform01_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz => sub-perform01_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-perform01/anat/{sub-perform01_space-other_T1w_seg-manual.json => sub-perform01_space-other_T1w_label-SC_seg.json} (100%) rename derivatives/labels/sub-perform01/anat/{sub-perform01_space-other_T1w_seg-manual.nii.gz => sub-perform01_space-other_T1w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-perform01/anat/{sub-perform01_space-other_T1w_labels-disc-manual.json => sub-perform01_space-other_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-perform01/anat/{sub-perform01_space-other_T1w_labels-disc-manual.nii.gz => sub-perform01_space-other_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-perform01/anat/{sub-perform01_space-other_T2star_seg-manual.json => sub-perform01_space-other_T2star_label-SC_seg.json} (100%) rename derivatives/labels/sub-perform01/anat/{sub-perform01_space-other_T2star_seg-manual.nii.gz => sub-perform01_space-other_T2star_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-perform01/anat/{sub-perform01_space-other_T2w_seg-manual.json => sub-perform01_space-other_T2w_label-SC_seg.json} (100%) rename derivatives/labels/sub-perform01/anat/{sub-perform01_space-other_T2w_seg-manual.nii.gz => sub-perform01_space-other_T2w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-perform01/anat/{sub-perform01_space-other_T2w_labels-disc-manual.json => sub-perform01_space-other_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-perform01/anat/{sub-perform01_space-other_T2w_labels-disc-manual.nii.gz => sub-perform01_space-other_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-perform01/dwi/{sub-perform01_rec-average_dwi_seg-manual.json => sub-perform01_rec-average_dwi_label-SC_seg.json} (100%) rename derivatives/labels/sub-perform01/dwi/{sub-perform01_rec-average_dwi_seg-manual.nii.gz => sub-perform01_rec-average_dwi_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-perform02/anat/{sub-perform02_flip-1_mt-on_space-other_MTS_seg-manual.json => sub-perform02_flip-1_mt-on_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-perform02/anat/{sub-perform02_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz => sub-perform02_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-perform02/anat/{sub-perform02_flip-2_mt-off_space-other_MTS_seg-manual.json => sub-perform02_flip-2_mt-off_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-perform02/anat/{sub-perform02_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz => sub-perform02_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-perform02/anat/{sub-perform02_space-other_T1w_seg-manual.json => sub-perform02_space-other_T1w_label-SC_seg.json} (100%) rename derivatives/labels/sub-perform02/anat/{sub-perform02_space-other_T1w_seg-manual.nii.gz => sub-perform02_space-other_T1w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-perform02/anat/{sub-perform02_space-other_T1w_labels-disc-manual.json => sub-perform02_space-other_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-perform02/anat/{sub-perform02_space-other_T1w_labels-disc-manual.nii.gz => sub-perform02_space-other_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-perform02/anat/{sub-perform02_space-other_T2star_seg-manual.json => sub-perform02_space-other_T2star_label-SC_seg.json} (100%) rename derivatives/labels/sub-perform02/anat/{sub-perform02_space-other_T2star_seg-manual.nii.gz => sub-perform02_space-other_T2star_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-perform02/anat/{sub-perform02_space-other_T2w_csfseg-manual.json => sub-perform02_space-other_T2w_csflabel-SC_seg.json} (100%) rename derivatives/labels/sub-perform02/anat/{sub-perform02_space-other_T2w_csfseg-manual.nii.gz => sub-perform02_space-other_T2w_csflabel-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-perform02/anat/{sub-perform02_space-other_T2w_seg-manual.json => sub-perform02_space-other_T2w_label-SC_seg.json} (100%) rename derivatives/labels/sub-perform02/anat/{sub-perform02_space-other_T2w_seg-manual.nii.gz => sub-perform02_space-other_T2w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-perform02/anat/{sub-perform02_space-other_T2w_labels-disc-manual.json => sub-perform02_space-other_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-perform02/anat/{sub-perform02_space-other_T2w_labels-disc-manual.nii.gz => sub-perform02_space-other_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-perform02/dwi/{sub-perform02_rec-average_dwi_seg-manual.json => sub-perform02_rec-average_dwi_label-SC_seg.json} (100%) rename derivatives/labels/sub-perform02/dwi/{sub-perform02_rec-average_dwi_seg-manual.nii.gz => sub-perform02_rec-average_dwi_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-perform03/anat/{sub-perform03_flip-1_mt-on_space-other_MTS_seg-manual.json => sub-perform03_flip-1_mt-on_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-perform03/anat/{sub-perform03_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz => sub-perform03_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-perform03/anat/{sub-perform03_flip-2_mt-off_space-other_MTS_seg-manual.json => sub-perform03_flip-2_mt-off_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-perform03/anat/{sub-perform03_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz => sub-perform03_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-perform03/anat/{sub-perform03_space-other_T1w_seg-manual.json => sub-perform03_space-other_T1w_label-SC_seg.json} (100%) rename derivatives/labels/sub-perform03/anat/{sub-perform03_space-other_T1w_seg-manual.nii.gz => sub-perform03_space-other_T1w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-perform03/anat/{sub-perform03_space-other_T1w_labels-disc-manual.json => sub-perform03_space-other_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-perform03/anat/{sub-perform03_space-other_T1w_labels-disc-manual.nii.gz => sub-perform03_space-other_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-perform03/anat/{sub-perform03_space-other_T2star_seg-manual.json => sub-perform03_space-other_T2star_label-SC_seg.json} (100%) rename derivatives/labels/sub-perform03/anat/{sub-perform03_space-other_T2star_seg-manual.nii.gz => sub-perform03_space-other_T2star_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-perform03/anat/{sub-perform03_space-other_T2w_seg-manual.json => sub-perform03_space-other_T2w_label-SC_seg.json} (100%) rename derivatives/labels/sub-perform03/anat/{sub-perform03_space-other_T2w_seg-manual.nii.gz => sub-perform03_space-other_T2w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-perform03/anat/{sub-perform03_space-other_T2w_labels-disc-manual.json => sub-perform03_space-other_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-perform03/anat/{sub-perform03_space-other_T2w_labels-disc-manual.nii.gz => sub-perform03_space-other_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-perform03/dwi/{sub-perform03_rec-average_dwi_seg-manual.json => sub-perform03_rec-average_dwi_label-SC_seg.json} (100%) rename derivatives/labels/sub-perform03/dwi/{sub-perform03_rec-average_dwi_seg-manual.nii.gz => sub-perform03_rec-average_dwi_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-perform04/anat/{sub-perform04_flip-1_mt-on_space-other_MTS_seg-manual.json => sub-perform04_flip-1_mt-on_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-perform04/anat/{sub-perform04_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz => sub-perform04_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-perform04/anat/{sub-perform04_flip-2_mt-off_space-other_MTS_seg-manual.json => sub-perform04_flip-2_mt-off_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-perform04/anat/{sub-perform04_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz => sub-perform04_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-perform04/anat/{sub-perform04_space-other_T1w_seg-manual.json => sub-perform04_space-other_T1w_label-SC_seg.json} (100%) rename derivatives/labels/sub-perform04/anat/{sub-perform04_space-other_T1w_seg-manual.nii.gz => sub-perform04_space-other_T1w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-perform04/anat/{sub-perform04_space-other_T1w_labels-disc-manual.json => sub-perform04_space-other_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-perform04/anat/{sub-perform04_space-other_T1w_labels-disc-manual.nii.gz => sub-perform04_space-other_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-perform04/anat/{sub-perform04_space-other_T2star_seg-manual.json => sub-perform04_space-other_T2star_label-SC_seg.json} (100%) rename derivatives/labels/sub-perform04/anat/{sub-perform04_space-other_T2star_seg-manual.nii.gz => sub-perform04_space-other_T2star_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-perform04/anat/{sub-perform04_space-other_T2w_seg-manual.json => sub-perform04_space-other_T2w_label-SC_seg.json} (100%) rename derivatives/labels/sub-perform04/anat/{sub-perform04_space-other_T2w_seg-manual.nii.gz => sub-perform04_space-other_T2w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-perform04/anat/{sub-perform04_space-other_T2w_labels-disc-manual.json => sub-perform04_space-other_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-perform04/anat/{sub-perform04_space-other_T2w_labels-disc-manual.nii.gz => sub-perform04_space-other_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-perform04/dwi/{sub-perform04_rec-average_dwi_seg-manual.json => sub-perform04_rec-average_dwi_label-SC_seg.json} (100%) rename derivatives/labels/sub-perform04/dwi/{sub-perform04_rec-average_dwi_seg-manual.nii.gz => sub-perform04_rec-average_dwi_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-perform05/anat/{sub-perform05_flip-1_mt-on_space-other_MTS_seg-manual.json => sub-perform05_flip-1_mt-on_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-perform05/anat/{sub-perform05_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz => sub-perform05_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-perform05/anat/{sub-perform05_flip-2_mt-off_space-other_MTS_seg-manual.json => sub-perform05_flip-2_mt-off_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-perform05/anat/{sub-perform05_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz => sub-perform05_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-perform05/anat/{sub-perform05_space-other_T1w_seg-manual.json => sub-perform05_space-other_T1w_label-SC_seg.json} (100%) rename derivatives/labels/sub-perform05/anat/{sub-perform05_space-other_T1w_seg-manual.nii.gz => sub-perform05_space-other_T1w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-perform05/anat/{sub-perform05_space-other_T1w_labels-disc-manual.json => sub-perform05_space-other_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-perform05/anat/{sub-perform05_space-other_T1w_labels-disc-manual.nii.gz => sub-perform05_space-other_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-perform05/anat/{sub-perform05_space-other_T2star_seg-manual.json => sub-perform05_space-other_T2star_label-SC_seg.json} (100%) rename derivatives/labels/sub-perform05/anat/{sub-perform05_space-other_T2star_seg-manual.nii.gz => sub-perform05_space-other_T2star_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-perform05/anat/{sub-perform05_space-other_T2w_seg-manual.json => sub-perform05_space-other_T2w_label-SC_seg.json} (100%) rename derivatives/labels/sub-perform05/anat/{sub-perform05_space-other_T2w_seg-manual.nii.gz => sub-perform05_space-other_T2w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-perform05/anat/{sub-perform05_space-other_T2w_labels-disc-manual.json => sub-perform05_space-other_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-perform05/anat/{sub-perform05_space-other_T2w_labels-disc-manual.nii.gz => sub-perform05_space-other_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-perform05/dwi/{sub-perform05_rec-average_dwi_seg-manual.json => sub-perform05_rec-average_dwi_label-SC_seg.json} (100%) rename derivatives/labels/sub-perform05/dwi/{sub-perform05_rec-average_dwi_seg-manual.nii.gz => sub-perform05_rec-average_dwi_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-perform06/anat/{sub-perform06_flip-1_mt-on_space-other_MTS_seg-manual.json => sub-perform06_flip-1_mt-on_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-perform06/anat/{sub-perform06_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz => sub-perform06_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-perform06/anat/{sub-perform06_flip-2_mt-off_space-other_MTS_seg-manual.json => sub-perform06_flip-2_mt-off_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-perform06/anat/{sub-perform06_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz => sub-perform06_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-perform06/anat/{sub-perform06_space-other_T1w_seg-manual.json => sub-perform06_space-other_T1w_label-SC_seg.json} (100%) rename derivatives/labels/sub-perform06/anat/{sub-perform06_space-other_T1w_seg-manual.nii.gz => sub-perform06_space-other_T1w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-perform06/anat/{sub-perform06_space-other_T1w_labels-disc-manual.json => sub-perform06_space-other_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-perform06/anat/{sub-perform06_space-other_T1w_labels-disc-manual.nii.gz => sub-perform06_space-other_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-perform06/anat/{sub-perform06_space-other_T2star_seg-manual.json => sub-perform06_space-other_T2star_label-SC_seg.json} (100%) rename derivatives/labels/sub-perform06/anat/{sub-perform06_space-other_T2star_seg-manual.nii.gz => sub-perform06_space-other_T2star_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-perform06/anat/{sub-perform06_space-other_T2w_seg-manual.json => sub-perform06_space-other_T2w_label-SC_seg.json} (100%) rename derivatives/labels/sub-perform06/anat/{sub-perform06_space-other_T2w_seg-manual.nii.gz => sub-perform06_space-other_T2w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-perform06/anat/{sub-perform06_space-other_T2w_labels-disc-manual.json => sub-perform06_space-other_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-perform06/anat/{sub-perform06_space-other_T2w_labels-disc-manual.nii.gz => sub-perform06_space-other_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-perform06/dwi/{sub-perform06_rec-average_dwi_seg-manual.json => sub-perform06_rec-average_dwi_label-SC_seg.json} (100%) rename derivatives/labels/sub-perform06/dwi/{sub-perform06_rec-average_dwi_seg-manual.nii.gz => sub-perform06_rec-average_dwi_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-queensland01/anat/{sub-queensland01_flip-1_mt-on_space-other_MTS_seg-manual.json => sub-queensland01_flip-1_mt-on_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-queensland01/anat/{sub-queensland01_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz => sub-queensland01_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-queensland01/anat/{sub-queensland01_flip-2_mt-off_space-other_MTS_seg-manual.json => sub-queensland01_flip-2_mt-off_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-queensland01/anat/{sub-queensland01_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz => sub-queensland01_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-queensland01/anat/{sub-queensland01_space-other_T1w_seg-manual.json => sub-queensland01_space-other_T1w_label-SC_seg.json} (100%) rename derivatives/labels/sub-queensland01/anat/{sub-queensland01_space-other_T1w_seg-manual.nii.gz => sub-queensland01_space-other_T1w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-queensland01/anat/{sub-queensland01_space-other_T1w_labels-disc-manual.json => sub-queensland01_space-other_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-queensland01/anat/{sub-queensland01_space-other_T1w_labels-disc-manual.nii.gz => sub-queensland01_space-other_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-queensland01/anat/{sub-queensland01_space-other_T2star_seg-manual.json => sub-queensland01_space-other_T2star_label-SC_seg.json} (100%) rename derivatives/labels/sub-queensland01/anat/{sub-queensland01_space-other_T2star_seg-manual.nii.gz => sub-queensland01_space-other_T2star_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-queensland01/anat/{sub-queensland01_space-other_T2w_seg-manual.json => sub-queensland01_space-other_T2w_label-SC_seg.json} (100%) rename derivatives/labels/sub-queensland01/anat/{sub-queensland01_space-other_T2w_seg-manual.nii.gz => sub-queensland01_space-other_T2w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-queensland01/anat/{sub-queensland01_space-other_T2w_labels-disc-manual.json => sub-queensland01_space-other_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-queensland01/anat/{sub-queensland01_space-other_T2w_labels-disc-manual.nii.gz => sub-queensland01_space-other_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-queensland01/dwi/{sub-queensland01_rec-average_dwi_seg-manual.json => sub-queensland01_rec-average_dwi_label-SC_seg.json} (100%) rename derivatives/labels/sub-queensland01/dwi/{sub-queensland01_rec-average_dwi_seg-manual.nii.gz => sub-queensland01_rec-average_dwi_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-queensland02/anat/{sub-queensland02_flip-1_mt-on_space-other_MTS_seg-manual.json => sub-queensland02_flip-1_mt-on_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-queensland02/anat/{sub-queensland02_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz => sub-queensland02_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-queensland02/anat/{sub-queensland02_flip-2_mt-off_space-other_MTS_seg-manual.json => sub-queensland02_flip-2_mt-off_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-queensland02/anat/{sub-queensland02_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz => sub-queensland02_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-queensland02/anat/{sub-queensland02_space-other_T1w_seg-manual.json => sub-queensland02_space-other_T1w_label-SC_seg.json} (100%) rename derivatives/labels/sub-queensland02/anat/{sub-queensland02_space-other_T1w_seg-manual.nii.gz => sub-queensland02_space-other_T1w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-queensland02/anat/{sub-queensland02_space-other_T1w_labels-disc-manual.json => sub-queensland02_space-other_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-queensland02/anat/{sub-queensland02_space-other_T1w_labels-disc-manual.nii.gz => sub-queensland02_space-other_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-queensland02/anat/{sub-queensland02_space-other_T2star_seg-manual.json => sub-queensland02_space-other_T2star_label-SC_seg.json} (100%) rename derivatives/labels/sub-queensland02/anat/{sub-queensland02_space-other_T2star_seg-manual.nii.gz => sub-queensland02_space-other_T2star_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-queensland02/anat/{sub-queensland02_space-other_T2w_seg-manual.json => sub-queensland02_space-other_T2w_label-SC_seg.json} (100%) rename derivatives/labels/sub-queensland02/anat/{sub-queensland02_space-other_T2w_seg-manual.nii.gz => sub-queensland02_space-other_T2w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-queensland02/anat/{sub-queensland02_space-other_T2w_labels-disc-manual.json => sub-queensland02_space-other_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-queensland02/anat/{sub-queensland02_space-other_T2w_labels-disc-manual.nii.gz => sub-queensland02_space-other_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-queensland02/dwi/{sub-queensland02_rec-average_dwi_seg-manual.json => sub-queensland02_rec-average_dwi_label-SC_seg.json} (100%) rename derivatives/labels/sub-queensland02/dwi/{sub-queensland02_rec-average_dwi_seg-manual.nii.gz => sub-queensland02_rec-average_dwi_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-queensland03/anat/{sub-queensland03_flip-1_mt-on_space-other_MTS_seg-manual.json => sub-queensland03_flip-1_mt-on_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-queensland03/anat/{sub-queensland03_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz => sub-queensland03_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-queensland03/anat/{sub-queensland03_flip-2_mt-off_space-other_MTS_seg-manual.json => sub-queensland03_flip-2_mt-off_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-queensland03/anat/{sub-queensland03_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz => sub-queensland03_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-queensland03/anat/{sub-queensland03_space-other_T1w_seg-manual.json => sub-queensland03_space-other_T1w_label-SC_seg.json} (100%) rename derivatives/labels/sub-queensland03/anat/{sub-queensland03_space-other_T1w_seg-manual.nii.gz => sub-queensland03_space-other_T1w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-queensland03/anat/{sub-queensland03_space-other_T1w_labels-disc-manual.json => sub-queensland03_space-other_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-queensland03/anat/{sub-queensland03_space-other_T1w_labels-disc-manual.nii.gz => sub-queensland03_space-other_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-queensland03/anat/{sub-queensland03_space-other_T2star_seg-manual.json => sub-queensland03_space-other_T2star_label-SC_seg.json} (100%) rename derivatives/labels/sub-queensland03/anat/{sub-queensland03_space-other_T2star_seg-manual.nii.gz => sub-queensland03_space-other_T2star_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-queensland03/anat/{sub-queensland03_space-other_T2w_seg-manual.json => sub-queensland03_space-other_T2w_label-SC_seg.json} (100%) rename derivatives/labels/sub-queensland03/anat/{sub-queensland03_space-other_T2w_seg-manual.nii.gz => sub-queensland03_space-other_T2w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-queensland03/anat/{sub-queensland03_space-other_T2w_labels-disc-manual.json => sub-queensland03_space-other_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-queensland03/anat/{sub-queensland03_space-other_T2w_labels-disc-manual.nii.gz => sub-queensland03_space-other_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-queensland03/dwi/{sub-queensland03_rec-average_dwi_seg-manual.json => sub-queensland03_rec-average_dwi_label-SC_seg.json} (100%) rename derivatives/labels/sub-queensland03/dwi/{sub-queensland03_rec-average_dwi_seg-manual.nii.gz => sub-queensland03_rec-average_dwi_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-queensland04/anat/{sub-queensland04_flip-1_mt-on_space-other_MTS_seg-manual.json => sub-queensland04_flip-1_mt-on_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-queensland04/anat/{sub-queensland04_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz => sub-queensland04_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-queensland04/anat/{sub-queensland04_flip-2_mt-off_space-other_MTS_seg-manual.json => sub-queensland04_flip-2_mt-off_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-queensland04/anat/{sub-queensland04_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz => sub-queensland04_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-queensland04/anat/{sub-queensland04_space-other_T1w_seg-manual.json => sub-queensland04_space-other_T1w_label-SC_seg.json} (100%) rename derivatives/labels/sub-queensland04/anat/{sub-queensland04_space-other_T1w_seg-manual.nii.gz => sub-queensland04_space-other_T1w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-queensland04/anat/{sub-queensland04_space-other_T1w_labels-disc-manual.json => sub-queensland04_space-other_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-queensland04/anat/{sub-queensland04_space-other_T1w_labels-disc-manual.nii.gz => sub-queensland04_space-other_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-queensland04/anat/{sub-queensland04_space-other_T2star_seg-manual.json => sub-queensland04_space-other_T2star_label-SC_seg.json} (100%) rename derivatives/labels/sub-queensland04/anat/{sub-queensland04_space-other_T2star_seg-manual.nii.gz => sub-queensland04_space-other_T2star_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-queensland04/anat/{sub-queensland04_space-other_T2w_seg-manual.json => sub-queensland04_space-other_T2w_label-SC_seg.json} (100%) rename derivatives/labels/sub-queensland04/anat/{sub-queensland04_space-other_T2w_seg-manual.nii.gz => sub-queensland04_space-other_T2w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-queensland04/anat/{sub-queensland04_space-other_T2w_labels-disc-manual.json => sub-queensland04_space-other_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-queensland04/anat/{sub-queensland04_space-other_T2w_labels-disc-manual.nii.gz => sub-queensland04_space-other_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-queensland04/dwi/{sub-queensland04_rec-average_dwi_seg-manual.json => sub-queensland04_rec-average_dwi_label-SC_seg.json} (100%) rename derivatives/labels/sub-queensland04/dwi/{sub-queensland04_rec-average_dwi_seg-manual.nii.gz => sub-queensland04_rec-average_dwi_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-queensland05/anat/{sub-queensland05_flip-1_mt-on_space-other_MTS_seg-manual.json => sub-queensland05_flip-1_mt-on_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-queensland05/anat/{sub-queensland05_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz => sub-queensland05_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-queensland05/anat/{sub-queensland05_flip-2_mt-off_space-other_MTS_seg-manual.json => sub-queensland05_flip-2_mt-off_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-queensland05/anat/{sub-queensland05_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz => sub-queensland05_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-queensland05/anat/{sub-queensland05_space-other_T1w_seg-manual.json => sub-queensland05_space-other_T1w_label-SC_seg.json} (100%) rename derivatives/labels/sub-queensland05/anat/{sub-queensland05_space-other_T1w_seg-manual.nii.gz => sub-queensland05_space-other_T1w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-queensland05/anat/{sub-queensland05_space-other_T1w_labels-disc-manual.json => sub-queensland05_space-other_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-queensland05/anat/{sub-queensland05_space-other_T1w_labels-disc-manual.nii.gz => sub-queensland05_space-other_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-queensland05/anat/{sub-queensland05_space-other_T2star_seg-manual.json => sub-queensland05_space-other_T2star_label-SC_seg.json} (100%) rename derivatives/labels/sub-queensland05/anat/{sub-queensland05_space-other_T2star_seg-manual.nii.gz => sub-queensland05_space-other_T2star_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-queensland05/anat/{sub-queensland05_space-other_T2w_seg-manual.json => sub-queensland05_space-other_T2w_label-SC_seg.json} (100%) rename derivatives/labels/sub-queensland05/anat/{sub-queensland05_space-other_T2w_seg-manual.nii.gz => sub-queensland05_space-other_T2w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-queensland05/anat/{sub-queensland05_space-other_T2w_labels-disc-manual.json => sub-queensland05_space-other_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-queensland05/anat/{sub-queensland05_space-other_T2w_labels-disc-manual.nii.gz => sub-queensland05_space-other_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-queensland05/dwi/{sub-queensland05_rec-average_dwi_seg-manual.json => sub-queensland05_rec-average_dwi_label-SC_seg.json} (100%) rename derivatives/labels/sub-queensland05/dwi/{sub-queensland05_rec-average_dwi_seg-manual.nii.gz => sub-queensland05_rec-average_dwi_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-queensland06/anat/{sub-queensland06_flip-1_mt-on_space-other_MTS_seg-manual.json => sub-queensland06_flip-1_mt-on_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-queensland06/anat/{sub-queensland06_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz => sub-queensland06_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-queensland06/anat/{sub-queensland06_flip-2_mt-off_space-other_MTS_seg-manual.json => sub-queensland06_flip-2_mt-off_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-queensland06/anat/{sub-queensland06_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz => sub-queensland06_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-queensland06/anat/{sub-queensland06_space-other_T1w_seg-manual.json => sub-queensland06_space-other_T1w_label-SC_seg.json} (100%) rename derivatives/labels/sub-queensland06/anat/{sub-queensland06_space-other_T1w_seg-manual.nii.gz => sub-queensland06_space-other_T1w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-queensland06/anat/{sub-queensland06_space-other_T1w_labels-disc-manual.json => sub-queensland06_space-other_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-queensland06/anat/{sub-queensland06_space-other_T1w_labels-disc-manual.nii.gz => sub-queensland06_space-other_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-queensland06/anat/{sub-queensland06_space-other_T2star_seg-manual.json => sub-queensland06_space-other_T2star_label-SC_seg.json} (100%) rename derivatives/labels/sub-queensland06/anat/{sub-queensland06_space-other_T2star_seg-manual.nii.gz => sub-queensland06_space-other_T2star_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-queensland06/anat/{sub-queensland06_space-other_T2w_seg-manual.json => sub-queensland06_space-other_T2w_label-SC_seg.json} (100%) rename derivatives/labels/sub-queensland06/anat/{sub-queensland06_space-other_T2w_seg-manual.nii.gz => sub-queensland06_space-other_T2w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-queensland06/anat/{sub-queensland06_space-other_T2w_labels-disc-manual.json => sub-queensland06_space-other_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-queensland06/anat/{sub-queensland06_space-other_T2w_labels-disc-manual.nii.gz => sub-queensland06_space-other_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-queensland06/dwi/{sub-queensland06_rec-average_dwi_seg-manual.json => sub-queensland06_rec-average_dwi_label-SC_seg.json} (100%) rename derivatives/labels/sub-queensland06/dwi/{sub-queensland06_rec-average_dwi_seg-manual.nii.gz => sub-queensland06_rec-average_dwi_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-sherbrooke01/anat/{sub-sherbrooke01_flip-1_mt-on_space-other_MTS_seg-manual.json => sub-sherbrooke01_flip-1_mt-on_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-sherbrooke01/anat/{sub-sherbrooke01_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz => sub-sherbrooke01_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-sherbrooke01/anat/{sub-sherbrooke01_flip-2_mt-off_space-other_MTS_seg-manual.json => sub-sherbrooke01_flip-2_mt-off_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-sherbrooke01/anat/{sub-sherbrooke01_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz => sub-sherbrooke01_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-sherbrooke01/anat/{sub-sherbrooke01_space-other_T1w_seg-manual.json => sub-sherbrooke01_space-other_T1w_label-SC_seg.json} (100%) rename derivatives/labels/sub-sherbrooke01/anat/{sub-sherbrooke01_space-other_T1w_seg-manual.nii.gz => sub-sherbrooke01_space-other_T1w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-sherbrooke01/anat/{sub-sherbrooke01_space-other_T1w_labels-disc-manual.json => sub-sherbrooke01_space-other_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-sherbrooke01/anat/{sub-sherbrooke01_space-other_T1w_labels-disc-manual.nii.gz => sub-sherbrooke01_space-other_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-sherbrooke01/anat/{sub-sherbrooke01_space-other_T2star_gmseg-manual.json => sub-sherbrooke01_space-other_T2star_gmlabel-SC_seg.json} (100%) rename derivatives/labels/sub-sherbrooke01/anat/{sub-sherbrooke01_space-other_T2star_gmseg-manual.nii.gz => sub-sherbrooke01_space-other_T2star_gmlabel-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-sherbrooke01/anat/{sub-sherbrooke01_space-other_T2star_seg-manual.json => sub-sherbrooke01_space-other_T2star_label-SC_seg.json} (100%) rename derivatives/labels/sub-sherbrooke01/anat/{sub-sherbrooke01_space-other_T2star_seg-manual.nii.gz => sub-sherbrooke01_space-other_T2star_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-sherbrooke01/anat/{sub-sherbrooke01_space-other_T2w_seg-manual.json => sub-sherbrooke01_space-other_T2w_label-SC_seg.json} (100%) rename derivatives/labels/sub-sherbrooke01/anat/{sub-sherbrooke01_space-other_T2w_seg-manual.nii.gz => sub-sherbrooke01_space-other_T2w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-sherbrooke01/anat/{sub-sherbrooke01_space-other_T2w_labels-disc-manual.json => sub-sherbrooke01_space-other_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-sherbrooke01/anat/{sub-sherbrooke01_space-other_T2w_labels-disc-manual.nii.gz => sub-sherbrooke01_space-other_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-sherbrooke01/dwi/{sub-sherbrooke01_rec-average_dwi_seg-manual.json => sub-sherbrooke01_rec-average_dwi_label-SC_seg.json} (100%) rename derivatives/labels/sub-sherbrooke01/dwi/{sub-sherbrooke01_rec-average_dwi_seg-manual.nii.gz => sub-sherbrooke01_rec-average_dwi_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-sherbrooke02/anat/{sub-sherbrooke02_flip-1_mt-on_space-other_MTS_seg-manual.json => sub-sherbrooke02_flip-1_mt-on_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-sherbrooke02/anat/{sub-sherbrooke02_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz => sub-sherbrooke02_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-sherbrooke02/anat/{sub-sherbrooke02_flip-2_mt-off_space-other_MTS_seg-manual.json => sub-sherbrooke02_flip-2_mt-off_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-sherbrooke02/anat/{sub-sherbrooke02_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz => sub-sherbrooke02_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-sherbrooke02/anat/{sub-sherbrooke02_space-other_T1w_seg-manual.json => sub-sherbrooke02_space-other_T1w_label-SC_seg.json} (100%) rename derivatives/labels/sub-sherbrooke02/anat/{sub-sherbrooke02_space-other_T1w_seg-manual.nii.gz => sub-sherbrooke02_space-other_T1w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-sherbrooke02/anat/{sub-sherbrooke02_space-other_T1w_labels-disc-manual.json => sub-sherbrooke02_space-other_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-sherbrooke02/anat/{sub-sherbrooke02_space-other_T1w_labels-disc-manual.nii.gz => sub-sherbrooke02_space-other_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-sherbrooke02/anat/{sub-sherbrooke02_space-other_T2star_seg-manual.json => sub-sherbrooke02_space-other_T2star_label-SC_seg.json} (100%) rename derivatives/labels/sub-sherbrooke02/anat/{sub-sherbrooke02_space-other_T2star_seg-manual.nii.gz => sub-sherbrooke02_space-other_T2star_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-sherbrooke02/anat/{sub-sherbrooke02_space-other_T2w_seg-manual.json => sub-sherbrooke02_space-other_T2w_label-SC_seg.json} (100%) rename derivatives/labels/sub-sherbrooke02/anat/{sub-sherbrooke02_space-other_T2w_seg-manual.nii.gz => sub-sherbrooke02_space-other_T2w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-sherbrooke02/anat/{sub-sherbrooke02_space-other_T2w_labels-disc-manual.json => sub-sherbrooke02_space-other_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-sherbrooke02/anat/{sub-sherbrooke02_space-other_T2w_labels-disc-manual.nii.gz => sub-sherbrooke02_space-other_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-sherbrooke02/dwi/{sub-sherbrooke02_rec-average_dwi_seg-manual.json => sub-sherbrooke02_rec-average_dwi_label-SC_seg.json} (100%) rename derivatives/labels/sub-sherbrooke02/dwi/{sub-sherbrooke02_rec-average_dwi_seg-manual.nii.gz => sub-sherbrooke02_rec-average_dwi_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-sherbrooke03/anat/{sub-sherbrooke03_flip-1_mt-on_space-other_MTS_seg-manual.json => sub-sherbrooke03_flip-1_mt-on_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-sherbrooke03/anat/{sub-sherbrooke03_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz => sub-sherbrooke03_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-sherbrooke03/anat/{sub-sherbrooke03_flip-2_mt-off_space-other_MTS_seg-manual.json => sub-sherbrooke03_flip-2_mt-off_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-sherbrooke03/anat/{sub-sherbrooke03_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz => sub-sherbrooke03_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-sherbrooke03/anat/{sub-sherbrooke03_space-other_T1w_seg-manual.json => sub-sherbrooke03_space-other_T1w_label-SC_seg.json} (100%) rename derivatives/labels/sub-sherbrooke03/anat/{sub-sherbrooke03_space-other_T1w_seg-manual.nii.gz => sub-sherbrooke03_space-other_T1w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-sherbrooke03/anat/{sub-sherbrooke03_space-other_T1w_labels-disc-manual.json => sub-sherbrooke03_space-other_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-sherbrooke03/anat/{sub-sherbrooke03_space-other_T1w_labels-disc-manual.nii.gz => sub-sherbrooke03_space-other_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-sherbrooke03/anat/{sub-sherbrooke03_space-other_T2star_gmseg-manual.json => sub-sherbrooke03_space-other_T2star_gmlabel-SC_seg.json} (100%) rename derivatives/labels/sub-sherbrooke03/anat/{sub-sherbrooke03_space-other_T2star_gmseg-manual.nii.gz => sub-sherbrooke03_space-other_T2star_gmlabel-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-sherbrooke03/anat/{sub-sherbrooke03_space-other_T2star_seg-manual.json => sub-sherbrooke03_space-other_T2star_label-SC_seg.json} (100%) rename derivatives/labels/sub-sherbrooke03/anat/{sub-sherbrooke03_space-other_T2star_seg-manual.nii.gz => sub-sherbrooke03_space-other_T2star_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-sherbrooke03/anat/{sub-sherbrooke03_space-other_T2w_seg-manual.json => sub-sherbrooke03_space-other_T2w_label-SC_seg.json} (100%) rename derivatives/labels/sub-sherbrooke03/anat/{sub-sherbrooke03_space-other_T2w_seg-manual.nii.gz => sub-sherbrooke03_space-other_T2w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-sherbrooke03/anat/{sub-sherbrooke03_space-other_T2w_labels-disc-manual.json => sub-sherbrooke03_space-other_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-sherbrooke03/anat/{sub-sherbrooke03_space-other_T2w_labels-disc-manual.nii.gz => sub-sherbrooke03_space-other_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-sherbrooke03/dwi/{sub-sherbrooke03_rec-average_dwi_seg-manual.json => sub-sherbrooke03_rec-average_dwi_label-SC_seg.json} (100%) rename derivatives/labels/sub-sherbrooke03/dwi/{sub-sherbrooke03_rec-average_dwi_seg-manual.nii.gz => sub-sherbrooke03_rec-average_dwi_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-sherbrooke04/anat/{sub-sherbrooke04_flip-1_mt-on_space-other_MTS_seg-manual.json => sub-sherbrooke04_flip-1_mt-on_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-sherbrooke04/anat/{sub-sherbrooke04_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz => sub-sherbrooke04_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-sherbrooke04/anat/{sub-sherbrooke04_flip-2_mt-off_space-other_MTS_seg-manual.json => sub-sherbrooke04_flip-2_mt-off_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-sherbrooke04/anat/{sub-sherbrooke04_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz => sub-sherbrooke04_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-sherbrooke04/anat/{sub-sherbrooke04_space-other_T1w_seg-manual.json => sub-sherbrooke04_space-other_T1w_label-SC_seg.json} (100%) rename derivatives/labels/sub-sherbrooke04/anat/{sub-sherbrooke04_space-other_T1w_seg-manual.nii.gz => sub-sherbrooke04_space-other_T1w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-sherbrooke04/anat/{sub-sherbrooke04_space-other_T1w_labels-disc-manual.json => sub-sherbrooke04_space-other_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-sherbrooke04/anat/{sub-sherbrooke04_space-other_T1w_labels-disc-manual.nii.gz => sub-sherbrooke04_space-other_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-sherbrooke04/anat/{sub-sherbrooke04_space-other_T2star_seg-manual.json => sub-sherbrooke04_space-other_T2star_label-SC_seg.json} (100%) rename derivatives/labels/sub-sherbrooke04/anat/{sub-sherbrooke04_space-other_T2star_seg-manual.nii.gz => sub-sherbrooke04_space-other_T2star_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-sherbrooke04/anat/{sub-sherbrooke04_space-other_T2w_seg-manual.json => sub-sherbrooke04_space-other_T2w_label-SC_seg.json} (100%) rename derivatives/labels/sub-sherbrooke04/anat/{sub-sherbrooke04_space-other_T2w_seg-manual.nii.gz => sub-sherbrooke04_space-other_T2w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-sherbrooke04/anat/{sub-sherbrooke04_space-other_T2w_labels-disc-manual.json => sub-sherbrooke04_space-other_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-sherbrooke04/anat/{sub-sherbrooke04_space-other_T2w_labels-disc-manual.nii.gz => sub-sherbrooke04_space-other_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-sherbrooke04/dwi/{sub-sherbrooke04_rec-average_dwi_seg-manual.json => sub-sherbrooke04_rec-average_dwi_label-SC_seg.json} (100%) rename derivatives/labels/sub-sherbrooke04/dwi/{sub-sherbrooke04_rec-average_dwi_seg-manual.nii.gz => sub-sherbrooke04_rec-average_dwi_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-sherbrooke05/anat/{sub-sherbrooke05_flip-1_mt-on_space-other_MTS_seg-manual.json => sub-sherbrooke05_flip-1_mt-on_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-sherbrooke05/anat/{sub-sherbrooke05_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz => sub-sherbrooke05_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-sherbrooke05/anat/{sub-sherbrooke05_flip-2_mt-off_space-other_MTS_seg-manual.json => sub-sherbrooke05_flip-2_mt-off_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-sherbrooke05/anat/{sub-sherbrooke05_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz => sub-sherbrooke05_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-sherbrooke05/anat/{sub-sherbrooke05_space-other_T1w_seg-manual.json => sub-sherbrooke05_space-other_T1w_label-SC_seg.json} (100%) rename derivatives/labels/sub-sherbrooke05/anat/{sub-sherbrooke05_space-other_T1w_seg-manual.nii.gz => sub-sherbrooke05_space-other_T1w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-sherbrooke05/anat/{sub-sherbrooke05_space-other_T1w_labels-disc-manual.json => sub-sherbrooke05_space-other_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-sherbrooke05/anat/{sub-sherbrooke05_space-other_T1w_labels-disc-manual.nii.gz => sub-sherbrooke05_space-other_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-sherbrooke05/anat/{sub-sherbrooke05_space-other_T2star_seg-manual.json => sub-sherbrooke05_space-other_T2star_label-SC_seg.json} (100%) rename derivatives/labels/sub-sherbrooke05/anat/{sub-sherbrooke05_space-other_T2star_seg-manual.nii.gz => sub-sherbrooke05_space-other_T2star_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-sherbrooke05/anat/{sub-sherbrooke05_space-other_T2w_seg-manual.json => sub-sherbrooke05_space-other_T2w_label-SC_seg.json} (100%) rename derivatives/labels/sub-sherbrooke05/anat/{sub-sherbrooke05_space-other_T2w_seg-manual.nii.gz => sub-sherbrooke05_space-other_T2w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-sherbrooke05/anat/{sub-sherbrooke05_space-other_T2w_labels-disc-manual.json => sub-sherbrooke05_space-other_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-sherbrooke05/anat/{sub-sherbrooke05_space-other_T2w_labels-disc-manual.nii.gz => sub-sherbrooke05_space-other_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-sherbrooke05/dwi/{sub-sherbrooke05_rec-average_dwi_seg-manual.json => sub-sherbrooke05_rec-average_dwi_label-SC_seg.json} (100%) rename derivatives/labels/sub-sherbrooke05/dwi/{sub-sherbrooke05_rec-average_dwi_seg-manual.nii.gz => sub-sherbrooke05_rec-average_dwi_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-sherbrooke06/anat/{sub-sherbrooke06_flip-1_mt-on_space-other_MTS_seg-manual.json => sub-sherbrooke06_flip-1_mt-on_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-sherbrooke06/anat/{sub-sherbrooke06_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz => sub-sherbrooke06_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-sherbrooke06/anat/{sub-sherbrooke06_flip-2_mt-off_space-other_MTS_seg-manual.json => sub-sherbrooke06_flip-2_mt-off_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-sherbrooke06/anat/{sub-sherbrooke06_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz => sub-sherbrooke06_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-sherbrooke06/anat/{sub-sherbrooke06_space-other_T1w_seg-manual.json => sub-sherbrooke06_space-other_T1w_label-SC_seg.json} (100%) rename derivatives/labels/sub-sherbrooke06/anat/{sub-sherbrooke06_space-other_T1w_seg-manual.nii.gz => sub-sherbrooke06_space-other_T1w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-sherbrooke06/anat/{sub-sherbrooke06_space-other_T1w_labels-disc-manual.json => sub-sherbrooke06_space-other_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-sherbrooke06/anat/{sub-sherbrooke06_space-other_T1w_labels-disc-manual.nii.gz => sub-sherbrooke06_space-other_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-sherbrooke06/anat/{sub-sherbrooke06_space-other_T2star_seg-manual.json => sub-sherbrooke06_space-other_T2star_label-SC_seg.json} (100%) rename derivatives/labels/sub-sherbrooke06/anat/{sub-sherbrooke06_space-other_T2star_seg-manual.nii.gz => sub-sherbrooke06_space-other_T2star_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-sherbrooke06/anat/{sub-sherbrooke06_space-other_T2w_seg-manual.json => sub-sherbrooke06_space-other_T2w_label-SC_seg.json} (100%) rename derivatives/labels/sub-sherbrooke06/anat/{sub-sherbrooke06_space-other_T2w_seg-manual.nii.gz => sub-sherbrooke06_space-other_T2w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-sherbrooke06/anat/{sub-sherbrooke06_space-other_T2w_labels-disc-manual.json => sub-sherbrooke06_space-other_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-sherbrooke06/anat/{sub-sherbrooke06_space-other_T2w_labels-disc-manual.nii.gz => sub-sherbrooke06_space-other_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-sherbrooke06/dwi/{sub-sherbrooke06_rec-average_dwi_seg-manual.json => sub-sherbrooke06_rec-average_dwi_label-SC_seg.json} (100%) rename derivatives/labels/sub-sherbrooke06/dwi/{sub-sherbrooke06_rec-average_dwi_seg-manual.nii.gz => sub-sherbrooke06_rec-average_dwi_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-sherbrooke07/anat/{sub-sherbrooke07_flip-1_mt-on_space-other_MTS_seg-manual.json => sub-sherbrooke07_flip-1_mt-on_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-sherbrooke07/anat/{sub-sherbrooke07_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz => sub-sherbrooke07_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-sherbrooke07/anat/{sub-sherbrooke07_flip-2_mt-off_space-other_MTS_seg-manual.json => sub-sherbrooke07_flip-2_mt-off_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-sherbrooke07/anat/{sub-sherbrooke07_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz => sub-sherbrooke07_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-sherbrooke07/anat/{sub-sherbrooke07_space-other_T1w_seg-manual.json => sub-sherbrooke07_space-other_T1w_label-SC_seg.json} (100%) rename derivatives/labels/sub-sherbrooke07/anat/{sub-sherbrooke07_space-other_T1w_seg-manual.nii.gz => sub-sherbrooke07_space-other_T1w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-sherbrooke07/anat/{sub-sherbrooke07_space-other_T1w_labels-disc-manual.json => sub-sherbrooke07_space-other_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-sherbrooke07/anat/{sub-sherbrooke07_space-other_T1w_labels-disc-manual.nii.gz => sub-sherbrooke07_space-other_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-sherbrooke07/anat/{sub-sherbrooke07_space-other_T2star_seg-manual.json => sub-sherbrooke07_space-other_T2star_label-SC_seg.json} (100%) rename derivatives/labels/sub-sherbrooke07/anat/{sub-sherbrooke07_space-other_T2star_seg-manual.nii.gz => sub-sherbrooke07_space-other_T2star_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-sherbrooke07/anat/{sub-sherbrooke07_space-other_T2w_seg-manual.json => sub-sherbrooke07_space-other_T2w_label-SC_seg.json} (100%) rename derivatives/labels/sub-sherbrooke07/anat/{sub-sherbrooke07_space-other_T2w_seg-manual.nii.gz => sub-sherbrooke07_space-other_T2w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-sherbrooke07/anat/{sub-sherbrooke07_space-other_T2w_labels-disc-manual.json => sub-sherbrooke07_space-other_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-sherbrooke07/anat/{sub-sherbrooke07_space-other_T2w_labels-disc-manual.nii.gz => sub-sherbrooke07_space-other_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-sherbrooke07/dwi/{sub-sherbrooke07_rec-average_dwi_seg-manual.json => sub-sherbrooke07_rec-average_dwi_label-SC_seg.json} (100%) rename derivatives/labels/sub-sherbrooke07/dwi/{sub-sherbrooke07_rec-average_dwi_seg-manual.nii.gz => sub-sherbrooke07_rec-average_dwi_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-stanford01/anat/{sub-stanford01_flip-1_mt-on_space-other_MTS_seg-manual.json => sub-stanford01_flip-1_mt-on_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-stanford01/anat/{sub-stanford01_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz => sub-stanford01_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-stanford01/anat/{sub-stanford01_flip-2_mt-off_space-other_MTS_seg-manual.json => sub-stanford01_flip-2_mt-off_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-stanford01/anat/{sub-stanford01_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz => sub-stanford01_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-stanford01/anat/{sub-stanford01_space-other_T1w_seg-manual.json => sub-stanford01_space-other_T1w_label-SC_seg.json} (100%) rename derivatives/labels/sub-stanford01/anat/{sub-stanford01_space-other_T1w_seg-manual.nii.gz => sub-stanford01_space-other_T1w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-stanford01/anat/{sub-stanford01_space-other_T1w_labels-disc-manual.json => sub-stanford01_space-other_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-stanford01/anat/{sub-stanford01_space-other_T1w_labels-disc-manual.nii.gz => sub-stanford01_space-other_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-stanford01/anat/{sub-stanford01_space-other_T2star_seg-manual.json => sub-stanford01_space-other_T2star_label-SC_seg.json} (100%) rename derivatives/labels/sub-stanford01/anat/{sub-stanford01_space-other_T2star_seg-manual.nii.gz => sub-stanford01_space-other_T2star_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-stanford01/anat/{sub-stanford01_space-other_T2w_seg-manual.json => sub-stanford01_space-other_T2w_label-SC_seg.json} (100%) rename derivatives/labels/sub-stanford01/anat/{sub-stanford01_space-other_T2w_seg-manual.nii.gz => sub-stanford01_space-other_T2w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-stanford01/anat/{sub-stanford01_space-other_T2w_labels-disc-manual.json => sub-stanford01_space-other_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-stanford01/anat/{sub-stanford01_space-other_T2w_labels-disc-manual.nii.gz => sub-stanford01_space-other_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-stanford01/dwi/{sub-stanford01_rec-average_dwi_seg-manual.json => sub-stanford01_rec-average_dwi_label-SC_seg.json} (100%) rename derivatives/labels/sub-stanford01/dwi/{sub-stanford01_rec-average_dwi_seg-manual.nii.gz => sub-stanford01_rec-average_dwi_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-stanford02/anat/{sub-stanford02_flip-1_mt-on_space-other_MTS_seg-manual.json => sub-stanford02_flip-1_mt-on_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-stanford02/anat/{sub-stanford02_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz => sub-stanford02_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-stanford02/anat/{sub-stanford02_flip-2_mt-off_space-other_MTS_seg-manual.json => sub-stanford02_flip-2_mt-off_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-stanford02/anat/{sub-stanford02_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz => sub-stanford02_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-stanford02/anat/{sub-stanford02_space-other_T1w_seg-manual.json => sub-stanford02_space-other_T1w_label-SC_seg.json} (100%) rename derivatives/labels/sub-stanford02/anat/{sub-stanford02_space-other_T1w_seg-manual.nii.gz => sub-stanford02_space-other_T1w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-stanford02/anat/{sub-stanford02_space-other_T1w_labels-disc-manual.json => sub-stanford02_space-other_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-stanford02/anat/{sub-stanford02_space-other_T1w_labels-disc-manual.nii.gz => sub-stanford02_space-other_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-stanford02/anat/{sub-stanford02_space-other_T2star_seg-manual.json => sub-stanford02_space-other_T2star_label-SC_seg.json} (100%) rename derivatives/labels/sub-stanford02/anat/{sub-stanford02_space-other_T2star_seg-manual.nii.gz => sub-stanford02_space-other_T2star_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-stanford02/anat/{sub-stanford02_space-other_T2w_seg-manual.json => sub-stanford02_space-other_T2w_label-SC_seg.json} (100%) rename derivatives/labels/sub-stanford02/anat/{sub-stanford02_space-other_T2w_seg-manual.nii.gz => sub-stanford02_space-other_T2w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-stanford02/anat/{sub-stanford02_space-other_T2w_labels-disc-manual.json => sub-stanford02_space-other_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-stanford02/anat/{sub-stanford02_space-other_T2w_labels-disc-manual.nii.gz => sub-stanford02_space-other_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-stanford02/dwi/{sub-stanford02_rec-average_dwi_seg-manual.json => sub-stanford02_rec-average_dwi_label-SC_seg.json} (100%) rename derivatives/labels/sub-stanford02/dwi/{sub-stanford02_rec-average_dwi_seg-manual.nii.gz => sub-stanford02_rec-average_dwi_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-stanford03/anat/{sub-stanford03_flip-1_mt-on_space-other_MTS_seg-manual.json => sub-stanford03_flip-1_mt-on_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-stanford03/anat/{sub-stanford03_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz => sub-stanford03_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-stanford03/anat/{sub-stanford03_flip-2_mt-off_space-other_MTS_seg-manual.json => sub-stanford03_flip-2_mt-off_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-stanford03/anat/{sub-stanford03_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz => sub-stanford03_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-stanford03/anat/{sub-stanford03_space-other_T1w_seg-manual.json => sub-stanford03_space-other_T1w_label-SC_seg.json} (100%) rename derivatives/labels/sub-stanford03/anat/{sub-stanford03_space-other_T1w_seg-manual.nii.gz => sub-stanford03_space-other_T1w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-stanford03/anat/{sub-stanford03_space-other_T1w_labels-disc-manual.json => sub-stanford03_space-other_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-stanford03/anat/{sub-stanford03_space-other_T1w_labels-disc-manual.nii.gz => sub-stanford03_space-other_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-stanford03/anat/{sub-stanford03_space-other_T2star_seg-manual.json => sub-stanford03_space-other_T2star_label-SC_seg.json} (100%) rename derivatives/labels/sub-stanford03/anat/{sub-stanford03_space-other_T2star_seg-manual.nii.gz => sub-stanford03_space-other_T2star_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-stanford03/anat/{sub-stanford03_space-other_T2w_seg-manual.json => sub-stanford03_space-other_T2w_label-SC_seg.json} (100%) rename derivatives/labels/sub-stanford03/anat/{sub-stanford03_space-other_T2w_seg-manual.nii.gz => sub-stanford03_space-other_T2w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-stanford03/anat/{sub-stanford03_space-other_T2w_labels-disc-manual.json => sub-stanford03_space-other_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-stanford03/anat/{sub-stanford03_space-other_T2w_labels-disc-manual.nii.gz => sub-stanford03_space-other_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-stanford03/dwi/{sub-stanford03_rec-average_dwi_seg-manual.json => sub-stanford03_rec-average_dwi_label-SC_seg.json} (100%) rename derivatives/labels/sub-stanford03/dwi/{sub-stanford03_rec-average_dwi_seg-manual.nii.gz => sub-stanford03_rec-average_dwi_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-stanford04/anat/{sub-stanford04_flip-1_mt-on_space-other_MTS_seg-manual.json => sub-stanford04_flip-1_mt-on_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-stanford04/anat/{sub-stanford04_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz => sub-stanford04_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-stanford04/anat/{sub-stanford04_flip-2_mt-off_space-other_MTS_seg-manual.json => sub-stanford04_flip-2_mt-off_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-stanford04/anat/{sub-stanford04_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz => sub-stanford04_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-stanford04/anat/{sub-stanford04_space-other_T1w_seg-manual.json => sub-stanford04_space-other_T1w_label-SC_seg.json} (100%) rename derivatives/labels/sub-stanford04/anat/{sub-stanford04_space-other_T1w_seg-manual.nii.gz => sub-stanford04_space-other_T1w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-stanford04/anat/{sub-stanford04_space-other_T1w_labels-disc-manual.json => sub-stanford04_space-other_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-stanford04/anat/{sub-stanford04_space-other_T1w_labels-disc-manual.nii.gz => sub-stanford04_space-other_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-stanford04/anat/{sub-stanford04_space-other_T2star_seg-manual.json => sub-stanford04_space-other_T2star_label-SC_seg.json} (100%) rename derivatives/labels/sub-stanford04/anat/{sub-stanford04_space-other_T2star_seg-manual.nii.gz => sub-stanford04_space-other_T2star_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-stanford04/anat/{sub-stanford04_space-other_T2w_seg-manual.json => sub-stanford04_space-other_T2w_label-SC_seg.json} (100%) rename derivatives/labels/sub-stanford04/anat/{sub-stanford04_space-other_T2w_seg-manual.nii.gz => sub-stanford04_space-other_T2w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-stanford04/anat/{sub-stanford04_space-other_T2w_labels-disc-manual.json => sub-stanford04_space-other_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-stanford04/anat/{sub-stanford04_space-other_T2w_labels-disc-manual.nii.gz => sub-stanford04_space-other_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-stanford04/dwi/{sub-stanford04_rec-average_dwi_seg-manual.json => sub-stanford04_rec-average_dwi_label-SC_seg.json} (100%) rename derivatives/labels/sub-stanford04/dwi/{sub-stanford04_rec-average_dwi_seg-manual.nii.gz => sub-stanford04_rec-average_dwi_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-stanford05/anat/{sub-stanford05_flip-1_mt-on_space-other_MTS_seg-manual.json => sub-stanford05_flip-1_mt-on_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-stanford05/anat/{sub-stanford05_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz => sub-stanford05_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-stanford05/anat/{sub-stanford05_flip-2_mt-off_space-other_MTS_seg-manual.json => sub-stanford05_flip-2_mt-off_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-stanford05/anat/{sub-stanford05_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz => sub-stanford05_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-stanford05/anat/{sub-stanford05_space-other_T1w_seg-manual.json => sub-stanford05_space-other_T1w_label-SC_seg.json} (100%) rename derivatives/labels/sub-stanford05/anat/{sub-stanford05_space-other_T1w_seg-manual.nii.gz => sub-stanford05_space-other_T1w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-stanford05/anat/{sub-stanford05_space-other_T1w_labels-disc-manual.json => sub-stanford05_space-other_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-stanford05/anat/{sub-stanford05_space-other_T1w_labels-disc-manual.nii.gz => sub-stanford05_space-other_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-stanford05/anat/{sub-stanford05_space-other_T2star_seg-manual.json => sub-stanford05_space-other_T2star_label-SC_seg.json} (100%) rename derivatives/labels/sub-stanford05/anat/{sub-stanford05_space-other_T2star_seg-manual.nii.gz => sub-stanford05_space-other_T2star_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-stanford05/anat/{sub-stanford05_space-other_T2w_seg-manual.json => sub-stanford05_space-other_T2w_label-SC_seg.json} (100%) rename derivatives/labels/sub-stanford05/anat/{sub-stanford05_space-other_T2w_seg-manual.nii.gz => sub-stanford05_space-other_T2w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-stanford05/anat/{sub-stanford05_space-other_T2w_labels-disc-manual.json => sub-stanford05_space-other_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-stanford05/anat/{sub-stanford05_space-other_T2w_labels-disc-manual.nii.gz => sub-stanford05_space-other_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-stanford05/dwi/{sub-stanford05_rec-average_dwi_seg-manual.json => sub-stanford05_rec-average_dwi_label-SC_seg.json} (100%) rename derivatives/labels/sub-stanford05/dwi/{sub-stanford05_rec-average_dwi_seg-manual.nii.gz => sub-stanford05_rec-average_dwi_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-stanford06/anat/{sub-stanford06_flip-1_mt-on_space-other_MTS_seg-manual.json => sub-stanford06_flip-1_mt-on_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-stanford06/anat/{sub-stanford06_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz => sub-stanford06_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-stanford06/anat/{sub-stanford06_flip-2_mt-off_space-other_MTS_seg-manual.json => sub-stanford06_flip-2_mt-off_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-stanford06/anat/{sub-stanford06_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz => sub-stanford06_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-stanford06/anat/{sub-stanford06_space-other_T1w_seg-manual.json => sub-stanford06_space-other_T1w_label-SC_seg.json} (100%) rename derivatives/labels/sub-stanford06/anat/{sub-stanford06_space-other_T1w_seg-manual.nii.gz => sub-stanford06_space-other_T1w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-stanford06/anat/{sub-stanford06_space-other_T1w_labels-disc-manual.json => sub-stanford06_space-other_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-stanford06/anat/{sub-stanford06_space-other_T1w_labels-disc-manual.nii.gz => sub-stanford06_space-other_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-stanford06/anat/{sub-stanford06_space-other_T2star_gmseg-manual.json => sub-stanford06_space-other_T2star_gmlabel-SC_seg.json} (100%) rename derivatives/labels/sub-stanford06/anat/{sub-stanford06_space-other_T2star_gmseg-manual.nii.gz => sub-stanford06_space-other_T2star_gmlabel-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-stanford06/anat/{sub-stanford06_space-other_T2star_seg-manual.json => sub-stanford06_space-other_T2star_label-SC_seg.json} (100%) rename derivatives/labels/sub-stanford06/anat/{sub-stanford06_space-other_T2star_seg-manual.nii.gz => sub-stanford06_space-other_T2star_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-stanford06/anat/{sub-stanford06_space-other_T2w_seg-manual.json => sub-stanford06_space-other_T2w_label-SC_seg.json} (100%) rename derivatives/labels/sub-stanford06/anat/{sub-stanford06_space-other_T2w_seg-manual.nii.gz => sub-stanford06_space-other_T2w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-stanford06/anat/{sub-stanford06_space-other_T2w_labels-disc-manual.json => sub-stanford06_space-other_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-stanford06/anat/{sub-stanford06_space-other_T2w_labels-disc-manual.nii.gz => sub-stanford06_space-other_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-stanford06/dwi/{sub-stanford06_rec-average_dwi_seg-manual.json => sub-stanford06_rec-average_dwi_label-SC_seg.json} (100%) rename derivatives/labels/sub-stanford06/dwi/{sub-stanford06_rec-average_dwi_seg-manual.nii.gz => sub-stanford06_rec-average_dwi_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-strasbourg01/anat/{sub-strasbourg01_flip-1_mt-on_space-other_MTS_seg-manual.json => sub-strasbourg01_flip-1_mt-on_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-strasbourg01/anat/{sub-strasbourg01_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz => sub-strasbourg01_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-strasbourg01/anat/{sub-strasbourg01_flip-2_mt-off_space-other_MTS_seg-manual.json => sub-strasbourg01_flip-2_mt-off_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-strasbourg01/anat/{sub-strasbourg01_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz => sub-strasbourg01_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-strasbourg01/anat/{sub-strasbourg01_space-other_T1w_seg-manual.json => sub-strasbourg01_space-other_T1w_label-SC_seg.json} (100%) rename derivatives/labels/sub-strasbourg01/anat/{sub-strasbourg01_space-other_T1w_seg-manual.nii.gz => sub-strasbourg01_space-other_T1w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-strasbourg01/anat/{sub-strasbourg01_space-other_T1w_labels-disc-manual.json => sub-strasbourg01_space-other_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-strasbourg01/anat/{sub-strasbourg01_space-other_T1w_labels-disc-manual.nii.gz => sub-strasbourg01_space-other_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-strasbourg01/anat/{sub-strasbourg01_space-other_T2star_seg-manual.json => sub-strasbourg01_space-other_T2star_label-SC_seg.json} (100%) rename derivatives/labels/sub-strasbourg01/anat/{sub-strasbourg01_space-other_T2star_seg-manual.nii.gz => sub-strasbourg01_space-other_T2star_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-strasbourg01/anat/{sub-strasbourg01_space-other_T2w_seg-manual.json => sub-strasbourg01_space-other_T2w_label-SC_seg.json} (100%) rename derivatives/labels/sub-strasbourg01/anat/{sub-strasbourg01_space-other_T2w_seg-manual.nii.gz => sub-strasbourg01_space-other_T2w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-strasbourg01/anat/{sub-strasbourg01_space-other_T2w_labels-disc-manual.json => sub-strasbourg01_space-other_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-strasbourg01/anat/{sub-strasbourg01_space-other_T2w_labels-disc-manual.nii.gz => sub-strasbourg01_space-other_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-strasbourg01/dwi/{sub-strasbourg01_rec-average_dwi_seg-manual.json => sub-strasbourg01_rec-average_dwi_label-SC_seg.json} (100%) rename derivatives/labels/sub-strasbourg01/dwi/{sub-strasbourg01_rec-average_dwi_seg-manual.nii.gz => sub-strasbourg01_rec-average_dwi_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-strasbourg02/anat/{sub-strasbourg02_flip-1_mt-on_space-other_MTS_seg-manual.json => sub-strasbourg02_flip-1_mt-on_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-strasbourg02/anat/{sub-strasbourg02_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz => sub-strasbourg02_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-strasbourg02/anat/{sub-strasbourg02_flip-2_mt-off_space-other_MTS_seg-manual.json => sub-strasbourg02_flip-2_mt-off_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-strasbourg02/anat/{sub-strasbourg02_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz => sub-strasbourg02_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-strasbourg02/anat/{sub-strasbourg02_space-other_T1w_seg-manual.json => sub-strasbourg02_space-other_T1w_label-SC_seg.json} (100%) rename derivatives/labels/sub-strasbourg02/anat/{sub-strasbourg02_space-other_T1w_seg-manual.nii.gz => sub-strasbourg02_space-other_T1w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-strasbourg02/anat/{sub-strasbourg02_space-other_T1w_labels-disc-manual.json => sub-strasbourg02_space-other_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-strasbourg02/anat/{sub-strasbourg02_space-other_T1w_labels-disc-manual.nii.gz => sub-strasbourg02_space-other_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-strasbourg02/anat/{sub-strasbourg02_space-other_T2star_seg-manual.json => sub-strasbourg02_space-other_T2star_label-SC_seg.json} (100%) rename derivatives/labels/sub-strasbourg02/anat/{sub-strasbourg02_space-other_T2star_seg-manual.nii.gz => sub-strasbourg02_space-other_T2star_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-strasbourg02/anat/{sub-strasbourg02_space-other_T2w_seg-manual.json => sub-strasbourg02_space-other_T2w_label-SC_seg.json} (100%) rename derivatives/labels/sub-strasbourg02/anat/{sub-strasbourg02_space-other_T2w_seg-manual.nii.gz => sub-strasbourg02_space-other_T2w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-strasbourg02/anat/{sub-strasbourg02_space-other_T2w_labels-disc-manual.json => sub-strasbourg02_space-other_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-strasbourg02/anat/{sub-strasbourg02_space-other_T2w_labels-disc-manual.nii.gz => sub-strasbourg02_space-other_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-strasbourg02/dwi/{sub-strasbourg02_rec-average_dwi_seg-manual.json => sub-strasbourg02_rec-average_dwi_label-SC_seg.json} (100%) rename derivatives/labels/sub-strasbourg02/dwi/{sub-strasbourg02_rec-average_dwi_seg-manual.nii.gz => sub-strasbourg02_rec-average_dwi_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-strasbourg03/anat/{sub-strasbourg03_flip-1_mt-on_space-other_MTS_seg-manual.json => sub-strasbourg03_flip-1_mt-on_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-strasbourg03/anat/{sub-strasbourg03_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz => sub-strasbourg03_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-strasbourg03/anat/{sub-strasbourg03_flip-2_mt-off_space-other_MTS_seg-manual.json => sub-strasbourg03_flip-2_mt-off_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-strasbourg03/anat/{sub-strasbourg03_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz => sub-strasbourg03_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-strasbourg03/anat/{sub-strasbourg03_space-other_T1w_seg-manual.json => sub-strasbourg03_space-other_T1w_label-SC_seg.json} (100%) rename derivatives/labels/sub-strasbourg03/anat/{sub-strasbourg03_space-other_T1w_seg-manual.nii.gz => sub-strasbourg03_space-other_T1w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-strasbourg03/anat/{sub-strasbourg03_space-other_T1w_labels-disc-manual.json => sub-strasbourg03_space-other_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-strasbourg03/anat/{sub-strasbourg03_space-other_T1w_labels-disc-manual.nii.gz => sub-strasbourg03_space-other_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-strasbourg03/anat/{sub-strasbourg03_space-other_T2star_seg-manual.json => sub-strasbourg03_space-other_T2star_label-SC_seg.json} (100%) rename derivatives/labels/sub-strasbourg03/anat/{sub-strasbourg03_space-other_T2star_seg-manual.nii.gz => sub-strasbourg03_space-other_T2star_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-strasbourg03/anat/{sub-strasbourg03_space-other_T2w_seg-manual.json => sub-strasbourg03_space-other_T2w_label-SC_seg.json} (100%) rename derivatives/labels/sub-strasbourg03/anat/{sub-strasbourg03_space-other_T2w_seg-manual.nii.gz => sub-strasbourg03_space-other_T2w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-strasbourg03/anat/{sub-strasbourg03_space-other_T2w_labels-disc-manual.json => sub-strasbourg03_space-other_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-strasbourg03/anat/{sub-strasbourg03_space-other_T2w_labels-disc-manual.nii.gz => sub-strasbourg03_space-other_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-strasbourg03/dwi/{sub-strasbourg03_rec-average_dwi_seg-manual.json => sub-strasbourg03_rec-average_dwi_label-SC_seg.json} (100%) rename derivatives/labels/sub-strasbourg03/dwi/{sub-strasbourg03_rec-average_dwi_seg-manual.nii.gz => sub-strasbourg03_rec-average_dwi_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-strasbourg04/anat/{sub-strasbourg04_flip-1_mt-on_space-other_MTS_seg-manual.json => sub-strasbourg04_flip-1_mt-on_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-strasbourg04/anat/{sub-strasbourg04_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz => sub-strasbourg04_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-strasbourg04/anat/{sub-strasbourg04_flip-2_mt-off_space-other_MTS_seg-manual.json => sub-strasbourg04_flip-2_mt-off_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-strasbourg04/anat/{sub-strasbourg04_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz => sub-strasbourg04_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-strasbourg04/anat/{sub-strasbourg04_space-other_T1w_seg-manual.json => sub-strasbourg04_space-other_T1w_label-SC_seg.json} (100%) rename derivatives/labels/sub-strasbourg04/anat/{sub-strasbourg04_space-other_T1w_seg-manual.nii.gz => sub-strasbourg04_space-other_T1w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-strasbourg04/anat/{sub-strasbourg04_space-other_T1w_labels-disc-manual.json => sub-strasbourg04_space-other_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-strasbourg04/anat/{sub-strasbourg04_space-other_T1w_labels-disc-manual.nii.gz => sub-strasbourg04_space-other_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-strasbourg04/anat/{sub-strasbourg04_space-other_T2star_seg-manual.json => sub-strasbourg04_space-other_T2star_label-SC_seg.json} (100%) rename derivatives/labels/sub-strasbourg04/anat/{sub-strasbourg04_space-other_T2star_seg-manual.nii.gz => sub-strasbourg04_space-other_T2star_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-strasbourg04/anat/{sub-strasbourg04_space-other_T2w_seg-manual.json => sub-strasbourg04_space-other_T2w_label-SC_seg.json} (100%) rename derivatives/labels/sub-strasbourg04/anat/{sub-strasbourg04_space-other_T2w_seg-manual.nii.gz => sub-strasbourg04_space-other_T2w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-strasbourg04/anat/{sub-strasbourg04_space-other_T2w_labels-disc-manual.json => sub-strasbourg04_space-other_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-strasbourg04/anat/{sub-strasbourg04_space-other_T2w_labels-disc-manual.nii.gz => sub-strasbourg04_space-other_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-strasbourg04/dwi/{sub-strasbourg04_rec-average_dwi_seg-manual.json => sub-strasbourg04_rec-average_dwi_label-SC_seg.json} (100%) rename derivatives/labels/sub-strasbourg04/dwi/{sub-strasbourg04_rec-average_dwi_seg-manual.nii.gz => sub-strasbourg04_rec-average_dwi_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-strasbourg05/anat/{sub-strasbourg05_flip-1_mt-on_space-other_MTS_seg-manual.json => sub-strasbourg05_flip-1_mt-on_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-strasbourg05/anat/{sub-strasbourg05_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz => sub-strasbourg05_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-strasbourg05/anat/{sub-strasbourg05_flip-2_mt-off_space-other_MTS_seg-manual.json => sub-strasbourg05_flip-2_mt-off_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-strasbourg05/anat/{sub-strasbourg05_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz => sub-strasbourg05_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-strasbourg05/anat/{sub-strasbourg05_space-other_T1w_seg-manual.json => sub-strasbourg05_space-other_T1w_label-SC_seg.json} (100%) rename derivatives/labels/sub-strasbourg05/anat/{sub-strasbourg05_space-other_T1w_seg-manual.nii.gz => sub-strasbourg05_space-other_T1w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-strasbourg05/anat/{sub-strasbourg05_space-other_T1w_labels-disc-manual.json => sub-strasbourg05_space-other_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-strasbourg05/anat/{sub-strasbourg05_space-other_T1w_labels-disc-manual.nii.gz => sub-strasbourg05_space-other_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-strasbourg05/anat/{sub-strasbourg05_space-other_T2star_seg-manual.json => sub-strasbourg05_space-other_T2star_label-SC_seg.json} (100%) rename derivatives/labels/sub-strasbourg05/anat/{sub-strasbourg05_space-other_T2star_seg-manual.nii.gz => sub-strasbourg05_space-other_T2star_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-strasbourg05/anat/{sub-strasbourg05_space-other_T2w_seg-manual.json => sub-strasbourg05_space-other_T2w_label-SC_seg.json} (100%) rename derivatives/labels/sub-strasbourg05/anat/{sub-strasbourg05_space-other_T2w_seg-manual.nii.gz => sub-strasbourg05_space-other_T2w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-strasbourg05/anat/{sub-strasbourg05_space-other_T2w_labels-disc-manual.json => sub-strasbourg05_space-other_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-strasbourg05/anat/{sub-strasbourg05_space-other_T2w_labels-disc-manual.nii.gz => sub-strasbourg05_space-other_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-strasbourg05/dwi/{sub-strasbourg05_rec-average_dwi_seg-manual.json => sub-strasbourg05_rec-average_dwi_label-SC_seg.json} (100%) rename derivatives/labels/sub-strasbourg05/dwi/{sub-strasbourg05_rec-average_dwi_seg-manual.nii.gz => sub-strasbourg05_rec-average_dwi_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-strasbourg06/anat/{sub-strasbourg06_flip-1_mt-on_space-other_MTS_seg-manual.json => sub-strasbourg06_flip-1_mt-on_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-strasbourg06/anat/{sub-strasbourg06_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz => sub-strasbourg06_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-strasbourg06/anat/{sub-strasbourg06_flip-2_mt-off_space-other_MTS_seg-manual.json => sub-strasbourg06_flip-2_mt-off_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-strasbourg06/anat/{sub-strasbourg06_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz => sub-strasbourg06_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-strasbourg06/anat/{sub-strasbourg06_space-other_T1w_seg-manual.json => sub-strasbourg06_space-other_T1w_label-SC_seg.json} (100%) rename derivatives/labels/sub-strasbourg06/anat/{sub-strasbourg06_space-other_T1w_seg-manual.nii.gz => sub-strasbourg06_space-other_T1w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-strasbourg06/anat/{sub-strasbourg06_space-other_T1w_labels-disc-manual.json => sub-strasbourg06_space-other_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-strasbourg06/anat/{sub-strasbourg06_space-other_T1w_labels-disc-manual.nii.gz => sub-strasbourg06_space-other_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-strasbourg06/anat/{sub-strasbourg06_space-other_T2star_seg-manual.json => sub-strasbourg06_space-other_T2star_label-SC_seg.json} (100%) rename derivatives/labels/sub-strasbourg06/anat/{sub-strasbourg06_space-other_T2star_seg-manual.nii.gz => sub-strasbourg06_space-other_T2star_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-strasbourg06/anat/{sub-strasbourg06_space-other_T2w_seg-manual.json => sub-strasbourg06_space-other_T2w_label-SC_seg.json} (100%) rename derivatives/labels/sub-strasbourg06/anat/{sub-strasbourg06_space-other_T2w_seg-manual.nii.gz => sub-strasbourg06_space-other_T2w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-strasbourg06/anat/{sub-strasbourg06_space-other_T2w_labels-disc-manual.json => sub-strasbourg06_space-other_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-strasbourg06/anat/{sub-strasbourg06_space-other_T2w_labels-disc-manual.nii.gz => sub-strasbourg06_space-other_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-strasbourg06/dwi/{sub-strasbourg06_rec-average_dwi_seg-manual.json => sub-strasbourg06_rec-average_dwi_label-SC_seg.json} (100%) rename derivatives/labels/sub-strasbourg06/dwi/{sub-strasbourg06_rec-average_dwi_seg-manual.nii.gz => sub-strasbourg06_rec-average_dwi_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-tehranS01/anat/{sub-tehranS01_flip-1_mt-on_space-other_MTS_seg-manual.json => sub-tehranS01_flip-1_mt-on_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-tehranS01/anat/{sub-tehranS01_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz => sub-tehranS01_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-tehranS01/anat/{sub-tehranS01_flip-2_mt-off_space-other_MTS_seg-manual.json => sub-tehranS01_flip-2_mt-off_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-tehranS01/anat/{sub-tehranS01_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz => sub-tehranS01_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-tehranS01/anat/{sub-tehranS01_space-other_T1w_seg-manual.json => sub-tehranS01_space-other_T1w_label-SC_seg.json} (100%) rename derivatives/labels/sub-tehranS01/anat/{sub-tehranS01_space-other_T1w_seg-manual.nii.gz => sub-tehranS01_space-other_T1w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-tehranS01/anat/{sub-tehranS01_space-other_T1w_labels-disc-manual.json => sub-tehranS01_space-other_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-tehranS01/anat/{sub-tehranS01_space-other_T1w_labels-disc-manual.nii.gz => sub-tehranS01_space-other_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-tehranS01/anat/{sub-tehranS01_space-other_T2star_seg-manual.json => sub-tehranS01_space-other_T2star_label-SC_seg.json} (100%) rename derivatives/labels/sub-tehranS01/anat/{sub-tehranS01_space-other_T2star_seg-manual.nii.gz => sub-tehranS01_space-other_T2star_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-tehranS01/anat/{sub-tehranS01_space-other_T2w_seg-manual.json => sub-tehranS01_space-other_T2w_label-SC_seg.json} (100%) rename derivatives/labels/sub-tehranS01/anat/{sub-tehranS01_space-other_T2w_seg-manual.nii.gz => sub-tehranS01_space-other_T2w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-tehranS01/anat/{sub-tehranS01_space-other_T2w_labels-disc-manual.json => sub-tehranS01_space-other_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-tehranS01/anat/{sub-tehranS01_space-other_T2w_labels-disc-manual.nii.gz => sub-tehranS01_space-other_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-tehranS01/dwi/{sub-tehranS01_rec-average_dwi_seg-manual.json => sub-tehranS01_rec-average_dwi_label-SC_seg.json} (100%) rename derivatives/labels/sub-tehranS01/dwi/{sub-tehranS01_rec-average_dwi_seg-manual.nii.gz => sub-tehranS01_rec-average_dwi_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-tehranS02/anat/{sub-tehranS02_flip-1_mt-on_space-other_MTS_seg-manual.json => sub-tehranS02_flip-1_mt-on_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-tehranS02/anat/{sub-tehranS02_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz => sub-tehranS02_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-tehranS02/anat/{sub-tehranS02_flip-2_mt-off_space-other_MTS_seg-manual.json => sub-tehranS02_flip-2_mt-off_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-tehranS02/anat/{sub-tehranS02_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz => sub-tehranS02_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-tehranS02/anat/{sub-tehranS02_space-other_T1w_seg-manual.json => sub-tehranS02_space-other_T1w_label-SC_seg.json} (100%) rename derivatives/labels/sub-tehranS02/anat/{sub-tehranS02_space-other_T1w_seg-manual.nii.gz => sub-tehranS02_space-other_T1w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-tehranS02/anat/{sub-tehranS02_space-other_T1w_labels-disc-manual.json => sub-tehranS02_space-other_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-tehranS02/anat/{sub-tehranS02_space-other_T1w_labels-disc-manual.nii.gz => sub-tehranS02_space-other_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-tehranS02/anat/{sub-tehranS02_space-other_T2star_seg-manual.json => sub-tehranS02_space-other_T2star_label-SC_seg.json} (100%) rename derivatives/labels/sub-tehranS02/anat/{sub-tehranS02_space-other_T2star_seg-manual.nii.gz => sub-tehranS02_space-other_T2star_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-tehranS02/anat/{sub-tehranS02_space-other_T2w_seg-manual.json => sub-tehranS02_space-other_T2w_label-SC_seg.json} (100%) rename derivatives/labels/sub-tehranS02/anat/{sub-tehranS02_space-other_T2w_seg-manual.nii.gz => sub-tehranS02_space-other_T2w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-tehranS02/anat/{sub-tehranS02_space-other_T2w_labels-disc-manual.json => sub-tehranS02_space-other_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-tehranS02/anat/{sub-tehranS02_space-other_T2w_labels-disc-manual.nii.gz => sub-tehranS02_space-other_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-tehranS02/dwi/{sub-tehranS02_rec-average_dwi_seg-manual.json => sub-tehranS02_rec-average_dwi_label-SC_seg.json} (100%) rename derivatives/labels/sub-tehranS02/dwi/{sub-tehranS02_rec-average_dwi_seg-manual.nii.gz => sub-tehranS02_rec-average_dwi_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-tehranS03/anat/{sub-tehranS03_flip-1_mt-on_space-other_MTS_seg-manual.json => sub-tehranS03_flip-1_mt-on_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-tehranS03/anat/{sub-tehranS03_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz => sub-tehranS03_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-tehranS03/anat/{sub-tehranS03_flip-2_mt-off_space-other_MTS_seg-manual.json => sub-tehranS03_flip-2_mt-off_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-tehranS03/anat/{sub-tehranS03_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz => sub-tehranS03_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-tehranS03/anat/{sub-tehranS03_space-other_T1w_seg-manual.json => sub-tehranS03_space-other_T1w_label-SC_seg.json} (100%) rename derivatives/labels/sub-tehranS03/anat/{sub-tehranS03_space-other_T1w_seg-manual.nii.gz => sub-tehranS03_space-other_T1w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-tehranS03/anat/{sub-tehranS03_space-other_T1w_labels-disc-manual.json => sub-tehranS03_space-other_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-tehranS03/anat/{sub-tehranS03_space-other_T1w_labels-disc-manual.nii.gz => sub-tehranS03_space-other_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-tehranS03/anat/{sub-tehranS03_space-other_T2star_seg-manual.json => sub-tehranS03_space-other_T2star_label-SC_seg.json} (100%) rename derivatives/labels/sub-tehranS03/anat/{sub-tehranS03_space-other_T2star_seg-manual.nii.gz => sub-tehranS03_space-other_T2star_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-tehranS03/anat/{sub-tehranS03_space-other_T2w_seg-manual.json => sub-tehranS03_space-other_T2w_label-SC_seg.json} (100%) rename derivatives/labels/sub-tehranS03/anat/{sub-tehranS03_space-other_T2w_seg-manual.nii.gz => sub-tehranS03_space-other_T2w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-tehranS03/anat/{sub-tehranS03_space-other_T2w_labels-disc-manual.json => sub-tehranS03_space-other_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-tehranS03/anat/{sub-tehranS03_space-other_T2w_labels-disc-manual.nii.gz => sub-tehranS03_space-other_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-tehranS03/dwi/{sub-tehranS03_rec-average_dwi_seg-manual.json => sub-tehranS03_rec-average_dwi_label-SC_seg.json} (100%) rename derivatives/labels/sub-tehranS03/dwi/{sub-tehranS03_rec-average_dwi_seg-manual.nii.gz => sub-tehranS03_rec-average_dwi_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-tehranS04/anat/{sub-tehranS04_flip-1_mt-on_space-other_MTS_seg-manual.json => sub-tehranS04_flip-1_mt-on_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-tehranS04/anat/{sub-tehranS04_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz => sub-tehranS04_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-tehranS04/anat/{sub-tehranS04_flip-2_mt-off_space-other_MTS_seg-manual.json => sub-tehranS04_flip-2_mt-off_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-tehranS04/anat/{sub-tehranS04_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz => sub-tehranS04_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-tehranS04/anat/{sub-tehranS04_space-other_T1w_seg-manual.json => sub-tehranS04_space-other_T1w_label-SC_seg.json} (100%) rename derivatives/labels/sub-tehranS04/anat/{sub-tehranS04_space-other_T1w_seg-manual.nii.gz => sub-tehranS04_space-other_T1w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-tehranS04/anat/{sub-tehranS04_space-other_T1w_labels-disc-manual.json => sub-tehranS04_space-other_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-tehranS04/anat/{sub-tehranS04_space-other_T1w_labels-disc-manual.nii.gz => sub-tehranS04_space-other_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-tehranS04/anat/{sub-tehranS04_space-other_T2star_seg-manual.json => sub-tehranS04_space-other_T2star_label-SC_seg.json} (100%) rename derivatives/labels/sub-tehranS04/anat/{sub-tehranS04_space-other_T2star_seg-manual.nii.gz => sub-tehranS04_space-other_T2star_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-tehranS04/anat/{sub-tehranS04_space-other_T2w_seg-manual.json => sub-tehranS04_space-other_T2w_label-SC_seg.json} (100%) rename derivatives/labels/sub-tehranS04/anat/{sub-tehranS04_space-other_T2w_seg-manual.nii.gz => sub-tehranS04_space-other_T2w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-tehranS04/anat/{sub-tehranS04_space-other_T2w_labels-disc-manual.json => sub-tehranS04_space-other_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-tehranS04/anat/{sub-tehranS04_space-other_T2w_labels-disc-manual.nii.gz => sub-tehranS04_space-other_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-tehranS04/dwi/{sub-tehranS04_rec-average_dwi_seg-manual.json => sub-tehranS04_rec-average_dwi_label-SC_seg.json} (100%) rename derivatives/labels/sub-tehranS04/dwi/{sub-tehranS04_rec-average_dwi_seg-manual.nii.gz => sub-tehranS04_rec-average_dwi_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-tehranS05/anat/{sub-tehranS05_flip-1_mt-on_space-other_MTS_seg-manual.json => sub-tehranS05_flip-1_mt-on_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-tehranS05/anat/{sub-tehranS05_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz => sub-tehranS05_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-tehranS05/anat/{sub-tehranS05_flip-2_mt-off_space-other_MTS_seg-manual.json => sub-tehranS05_flip-2_mt-off_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-tehranS05/anat/{sub-tehranS05_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz => sub-tehranS05_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-tehranS05/anat/{sub-tehranS05_space-other_T1w_seg-manual.json => sub-tehranS05_space-other_T1w_label-SC_seg.json} (100%) rename derivatives/labels/sub-tehranS05/anat/{sub-tehranS05_space-other_T1w_seg-manual.nii.gz => sub-tehranS05_space-other_T1w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-tehranS05/anat/{sub-tehranS05_space-other_T1w_labels-disc-manual.json => sub-tehranS05_space-other_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-tehranS05/anat/{sub-tehranS05_space-other_T1w_labels-disc-manual.nii.gz => sub-tehranS05_space-other_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-tehranS05/anat/{sub-tehranS05_space-other_T2star_seg-manual.json => sub-tehranS05_space-other_T2star_label-SC_seg.json} (100%) rename derivatives/labels/sub-tehranS05/anat/{sub-tehranS05_space-other_T2star_seg-manual.nii.gz => sub-tehranS05_space-other_T2star_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-tehranS05/anat/{sub-tehranS05_space-other_T2w_seg-manual.json => sub-tehranS05_space-other_T2w_label-SC_seg.json} (100%) rename derivatives/labels/sub-tehranS05/anat/{sub-tehranS05_space-other_T2w_seg-manual.nii.gz => sub-tehranS05_space-other_T2w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-tehranS05/anat/{sub-tehranS05_space-other_T2w_labels-disc-manual.json => sub-tehranS05_space-other_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-tehranS05/anat/{sub-tehranS05_space-other_T2w_labels-disc-manual.nii.gz => sub-tehranS05_space-other_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-tehranS05/dwi/{sub-tehranS05_rec-average_dwi_seg-manual.json => sub-tehranS05_rec-average_dwi_label-SC_seg.json} (100%) rename derivatives/labels/sub-tehranS05/dwi/{sub-tehranS05_rec-average_dwi_seg-manual.nii.gz => sub-tehranS05_rec-average_dwi_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-tehranS06/anat/{sub-tehranS06_flip-1_mt-on_space-other_MTS_seg-manual.json => sub-tehranS06_flip-1_mt-on_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-tehranS06/anat/{sub-tehranS06_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz => sub-tehranS06_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-tehranS06/anat/{sub-tehranS06_flip-2_mt-off_space-other_MTS_seg-manual.json => sub-tehranS06_flip-2_mt-off_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-tehranS06/anat/{sub-tehranS06_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz => sub-tehranS06_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-tehranS06/anat/{sub-tehranS06_space-other_T1w_seg-manual.json => sub-tehranS06_space-other_T1w_label-SC_seg.json} (100%) rename derivatives/labels/sub-tehranS06/anat/{sub-tehranS06_space-other_T1w_seg-manual.nii.gz => sub-tehranS06_space-other_T1w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-tehranS06/anat/{sub-tehranS06_space-other_T1w_labels-disc-manual.json => sub-tehranS06_space-other_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-tehranS06/anat/{sub-tehranS06_space-other_T1w_labels-disc-manual.nii.gz => sub-tehranS06_space-other_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-tehranS06/anat/{sub-tehranS06_space-other_T2star_seg-manual.json => sub-tehranS06_space-other_T2star_label-SC_seg.json} (100%) rename derivatives/labels/sub-tehranS06/anat/{sub-tehranS06_space-other_T2star_seg-manual.nii.gz => sub-tehranS06_space-other_T2star_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-tehranS06/anat/{sub-tehranS06_space-other_T2w_seg-manual.json => sub-tehranS06_space-other_T2w_label-SC_seg.json} (100%) rename derivatives/labels/sub-tehranS06/anat/{sub-tehranS06_space-other_T2w_seg-manual.nii.gz => sub-tehranS06_space-other_T2w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-tehranS06/anat/{sub-tehranS06_space-other_T2w_labels-disc-manual.json => sub-tehranS06_space-other_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-tehranS06/anat/{sub-tehranS06_space-other_T2w_labels-disc-manual.nii.gz => sub-tehranS06_space-other_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-tehranS06/dwi/{sub-tehranS06_rec-average_dwi_seg-manual.json => sub-tehranS06_rec-average_dwi_label-SC_seg.json} (100%) rename derivatives/labels/sub-tehranS06/dwi/{sub-tehranS06_rec-average_dwi_seg-manual.nii.gz => sub-tehranS06_rec-average_dwi_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-tokyo750w01/anat/{sub-tokyo750w01_flip-1_mt-on_space-other_MTS_seg-manual.json => sub-tokyo750w01_flip-1_mt-on_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-tokyo750w01/anat/{sub-tokyo750w01_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz => sub-tokyo750w01_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-tokyo750w01/anat/{sub-tokyo750w01_flip-2_mt-off_space-other_MTS_seg-manual.json => sub-tokyo750w01_flip-2_mt-off_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-tokyo750w01/anat/{sub-tokyo750w01_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz => sub-tokyo750w01_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-tokyo750w01/anat/{sub-tokyo750w01_space-other_T1w_seg-manual.json => sub-tokyo750w01_space-other_T1w_label-SC_seg.json} (100%) rename derivatives/labels/sub-tokyo750w01/anat/{sub-tokyo750w01_space-other_T1w_seg-manual.nii.gz => sub-tokyo750w01_space-other_T1w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-tokyo750w01/anat/{sub-tokyo750w01_space-other_T1w_labels-disc-manual.json => sub-tokyo750w01_space-other_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-tokyo750w01/anat/{sub-tokyo750w01_space-other_T1w_labels-disc-manual.nii.gz => sub-tokyo750w01_space-other_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-tokyo750w01/anat/{sub-tokyo750w01_space-other_T2star_seg-manual.json => sub-tokyo750w01_space-other_T2star_label-SC_seg.json} (100%) rename derivatives/labels/sub-tokyo750w01/anat/{sub-tokyo750w01_space-other_T2star_seg-manual.nii.gz => sub-tokyo750w01_space-other_T2star_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-tokyo750w01/anat/{sub-tokyo750w01_space-other_T2w_seg-manual.json => sub-tokyo750w01_space-other_T2w_label-SC_seg.json} (100%) rename derivatives/labels/sub-tokyo750w01/anat/{sub-tokyo750w01_space-other_T2w_seg-manual.nii.gz => sub-tokyo750w01_space-other_T2w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-tokyo750w01/anat/{sub-tokyo750w01_space-other_T2w_labels-disc-manual.json => sub-tokyo750w01_space-other_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-tokyo750w01/anat/{sub-tokyo750w01_space-other_T2w_labels-disc-manual.nii.gz => sub-tokyo750w01_space-other_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-tokyo750w01/dwi/{sub-tokyo750w01_rec-average_dwi_seg-manual.json => sub-tokyo750w01_rec-average_dwi_label-SC_seg.json} (100%) rename derivatives/labels/sub-tokyo750w01/dwi/{sub-tokyo750w01_rec-average_dwi_seg-manual.nii.gz => sub-tokyo750w01_rec-average_dwi_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-tokyo750w02/anat/{sub-tokyo750w02_flip-1_mt-on_space-other_MTS_seg-manual.json => sub-tokyo750w02_flip-1_mt-on_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-tokyo750w02/anat/{sub-tokyo750w02_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz => sub-tokyo750w02_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-tokyo750w02/anat/{sub-tokyo750w02_flip-2_mt-off_space-other_MTS_seg-manual.json => sub-tokyo750w02_flip-2_mt-off_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-tokyo750w02/anat/{sub-tokyo750w02_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz => sub-tokyo750w02_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-tokyo750w02/anat/{sub-tokyo750w02_space-other_T1w_seg-manual.json => sub-tokyo750w02_space-other_T1w_label-SC_seg.json} (100%) rename derivatives/labels/sub-tokyo750w02/anat/{sub-tokyo750w02_space-other_T1w_seg-manual.nii.gz => sub-tokyo750w02_space-other_T1w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-tokyo750w02/anat/{sub-tokyo750w02_space-other_T1w_labels-disc-manual.json => sub-tokyo750w02_space-other_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-tokyo750w02/anat/{sub-tokyo750w02_space-other_T1w_labels-disc-manual.nii.gz => sub-tokyo750w02_space-other_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-tokyo750w02/anat/{sub-tokyo750w02_space-other_T2star_seg-manual.json => sub-tokyo750w02_space-other_T2star_label-SC_seg.json} (100%) rename derivatives/labels/sub-tokyo750w02/anat/{sub-tokyo750w02_space-other_T2star_seg-manual.nii.gz => sub-tokyo750w02_space-other_T2star_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-tokyo750w02/anat/{sub-tokyo750w02_space-other_T2w_seg-manual.json => sub-tokyo750w02_space-other_T2w_label-SC_seg.json} (100%) rename derivatives/labels/sub-tokyo750w02/anat/{sub-tokyo750w02_space-other_T2w_seg-manual.nii.gz => sub-tokyo750w02_space-other_T2w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-tokyo750w02/anat/{sub-tokyo750w02_space-other_T2w_labels-disc-manual.json => sub-tokyo750w02_space-other_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-tokyo750w02/anat/{sub-tokyo750w02_space-other_T2w_labels-disc-manual.nii.gz => sub-tokyo750w02_space-other_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-tokyo750w02/dwi/{sub-tokyo750w02_rec-average_dwi_seg-manual.json => sub-tokyo750w02_rec-average_dwi_label-SC_seg.json} (100%) rename derivatives/labels/sub-tokyo750w02/dwi/{sub-tokyo750w02_rec-average_dwi_seg-manual.nii.gz => sub-tokyo750w02_rec-average_dwi_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-tokyo750w03/anat/{sub-tokyo750w03_flip-1_mt-on_space-other_MTS_seg-manual.json => sub-tokyo750w03_flip-1_mt-on_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-tokyo750w03/anat/{sub-tokyo750w03_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz => sub-tokyo750w03_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-tokyo750w03/anat/{sub-tokyo750w03_flip-2_mt-off_space-other_MTS_seg-manual.json => sub-tokyo750w03_flip-2_mt-off_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-tokyo750w03/anat/{sub-tokyo750w03_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz => sub-tokyo750w03_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-tokyo750w03/anat/{sub-tokyo750w03_space-other_T1w_seg-manual.json => sub-tokyo750w03_space-other_T1w_label-SC_seg.json} (100%) rename derivatives/labels/sub-tokyo750w03/anat/{sub-tokyo750w03_space-other_T1w_seg-manual.nii.gz => sub-tokyo750w03_space-other_T1w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-tokyo750w03/anat/{sub-tokyo750w03_space-other_T1w_labels-disc-manual.json => sub-tokyo750w03_space-other_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-tokyo750w03/anat/{sub-tokyo750w03_space-other_T1w_labels-disc-manual.nii.gz => sub-tokyo750w03_space-other_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-tokyo750w03/anat/{sub-tokyo750w03_space-other_T2star_seg-manual.json => sub-tokyo750w03_space-other_T2star_label-SC_seg.json} (100%) rename derivatives/labels/sub-tokyo750w03/anat/{sub-tokyo750w03_space-other_T2star_seg-manual.nii.gz => sub-tokyo750w03_space-other_T2star_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-tokyo750w03/anat/{sub-tokyo750w03_space-other_T2w_seg-manual.json => sub-tokyo750w03_space-other_T2w_label-SC_seg.json} (100%) rename derivatives/labels/sub-tokyo750w03/anat/{sub-tokyo750w03_space-other_T2w_seg-manual.nii.gz => sub-tokyo750w03_space-other_T2w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-tokyo750w03/anat/{sub-tokyo750w03_space-other_T2w_labels-disc-manual.json => sub-tokyo750w03_space-other_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-tokyo750w03/anat/{sub-tokyo750w03_space-other_T2w_labels-disc-manual.nii.gz => sub-tokyo750w03_space-other_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-tokyo750w03/dwi/{sub-tokyo750w03_rec-average_dwi_seg-manual.json => sub-tokyo750w03_rec-average_dwi_label-SC_seg.json} (100%) rename derivatives/labels/sub-tokyo750w03/dwi/{sub-tokyo750w03_rec-average_dwi_seg-manual.nii.gz => sub-tokyo750w03_rec-average_dwi_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-tokyo750w04/anat/{sub-tokyo750w04_flip-1_mt-on_space-other_MTS_seg-manual.json => sub-tokyo750w04_flip-1_mt-on_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-tokyo750w04/anat/{sub-tokyo750w04_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz => sub-tokyo750w04_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-tokyo750w04/anat/{sub-tokyo750w04_flip-2_mt-off_space-other_MTS_seg-manual.json => sub-tokyo750w04_flip-2_mt-off_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-tokyo750w04/anat/{sub-tokyo750w04_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz => sub-tokyo750w04_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-tokyo750w04/anat/{sub-tokyo750w04_space-other_T1w_seg-manual.json => sub-tokyo750w04_space-other_T1w_label-SC_seg.json} (100%) rename derivatives/labels/sub-tokyo750w04/anat/{sub-tokyo750w04_space-other_T1w_seg-manual.nii.gz => sub-tokyo750w04_space-other_T1w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-tokyo750w04/anat/{sub-tokyo750w04_space-other_T1w_labels-disc-manual.json => sub-tokyo750w04_space-other_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-tokyo750w04/anat/{sub-tokyo750w04_space-other_T1w_labels-disc-manual.nii.gz => sub-tokyo750w04_space-other_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-tokyo750w04/anat/{sub-tokyo750w04_space-other_T2star_seg-manual.json => sub-tokyo750w04_space-other_T2star_label-SC_seg.json} (100%) rename derivatives/labels/sub-tokyo750w04/anat/{sub-tokyo750w04_space-other_T2star_seg-manual.nii.gz => sub-tokyo750w04_space-other_T2star_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-tokyo750w04/anat/{sub-tokyo750w04_space-other_T2w_seg-manual.json => sub-tokyo750w04_space-other_T2w_label-SC_seg.json} (100%) rename derivatives/labels/sub-tokyo750w04/anat/{sub-tokyo750w04_space-other_T2w_seg-manual.nii.gz => sub-tokyo750w04_space-other_T2w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-tokyo750w04/anat/{sub-tokyo750w04_space-other_T2w_labels-disc-manual.json => sub-tokyo750w04_space-other_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-tokyo750w04/anat/{sub-tokyo750w04_space-other_T2w_labels-disc-manual.nii.gz => sub-tokyo750w04_space-other_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-tokyo750w04/dwi/{sub-tokyo750w04_rec-average_dwi_seg-manual.json => sub-tokyo750w04_rec-average_dwi_label-SC_seg.json} (100%) rename derivatives/labels/sub-tokyo750w04/dwi/{sub-tokyo750w04_rec-average_dwi_seg-manual.nii.gz => sub-tokyo750w04_rec-average_dwi_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-tokyo750w05/anat/{sub-tokyo750w05_flip-1_mt-on_space-other_MTS_seg-manual.json => sub-tokyo750w05_flip-1_mt-on_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-tokyo750w05/anat/{sub-tokyo750w05_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz => sub-tokyo750w05_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-tokyo750w05/anat/{sub-tokyo750w05_flip-2_mt-off_space-other_MTS_seg-manual.json => sub-tokyo750w05_flip-2_mt-off_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-tokyo750w05/anat/{sub-tokyo750w05_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz => sub-tokyo750w05_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-tokyo750w05/anat/{sub-tokyo750w05_space-other_T1w_seg-manual.json => sub-tokyo750w05_space-other_T1w_label-SC_seg.json} (100%) rename derivatives/labels/sub-tokyo750w05/anat/{sub-tokyo750w05_space-other_T1w_seg-manual.nii.gz => sub-tokyo750w05_space-other_T1w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-tokyo750w05/anat/{sub-tokyo750w05_space-other_T1w_labels-disc-manual.json => sub-tokyo750w05_space-other_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-tokyo750w05/anat/{sub-tokyo750w05_space-other_T1w_labels-disc-manual.nii.gz => sub-tokyo750w05_space-other_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-tokyo750w05/anat/{sub-tokyo750w05_space-other_T2star_gmseg-manual.json => sub-tokyo750w05_space-other_T2star_gmlabel-SC_seg.json} (100%) rename derivatives/labels/sub-tokyo750w05/anat/{sub-tokyo750w05_space-other_T2star_gmseg-manual.nii.gz => sub-tokyo750w05_space-other_T2star_gmlabel-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-tokyo750w05/anat/{sub-tokyo750w05_space-other_T2star_seg-manual.json => sub-tokyo750w05_space-other_T2star_label-SC_seg.json} (100%) rename derivatives/labels/sub-tokyo750w05/anat/{sub-tokyo750w05_space-other_T2star_seg-manual.nii.gz => sub-tokyo750w05_space-other_T2star_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-tokyo750w05/anat/{sub-tokyo750w05_space-other_T2w_seg-manual.json => sub-tokyo750w05_space-other_T2w_label-SC_seg.json} (100%) rename derivatives/labels/sub-tokyo750w05/anat/{sub-tokyo750w05_space-other_T2w_seg-manual.nii.gz => sub-tokyo750w05_space-other_T2w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-tokyo750w05/anat/{sub-tokyo750w05_space-other_T2w_labels-disc-manual.json => sub-tokyo750w05_space-other_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-tokyo750w05/anat/{sub-tokyo750w05_space-other_T2w_labels-disc-manual.nii.gz => sub-tokyo750w05_space-other_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-tokyo750w05/dwi/{sub-tokyo750w05_rec-average_dwi_seg-manual.json => sub-tokyo750w05_rec-average_dwi_label-SC_seg.json} (100%) rename derivatives/labels/sub-tokyo750w05/dwi/{sub-tokyo750w05_rec-average_dwi_seg-manual.nii.gz => sub-tokyo750w05_rec-average_dwi_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-tokyo750w06/anat/{sub-tokyo750w06_flip-1_mt-on_space-other_MTS_seg-manual.json => sub-tokyo750w06_flip-1_mt-on_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-tokyo750w06/anat/{sub-tokyo750w06_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz => sub-tokyo750w06_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-tokyo750w06/anat/{sub-tokyo750w06_flip-2_mt-off_space-other_MTS_seg-manual.json => sub-tokyo750w06_flip-2_mt-off_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-tokyo750w06/anat/{sub-tokyo750w06_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz => sub-tokyo750w06_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-tokyo750w06/anat/{sub-tokyo750w06_space-other_T1w_seg-manual.json => sub-tokyo750w06_space-other_T1w_label-SC_seg.json} (100%) rename derivatives/labels/sub-tokyo750w06/anat/{sub-tokyo750w06_space-other_T1w_seg-manual.nii.gz => sub-tokyo750w06_space-other_T1w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-tokyo750w06/anat/{sub-tokyo750w06_space-other_T1w_labels-disc-manual.json => sub-tokyo750w06_space-other_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-tokyo750w06/anat/{sub-tokyo750w06_space-other_T1w_labels-disc-manual.nii.gz => sub-tokyo750w06_space-other_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-tokyo750w06/anat/{sub-tokyo750w06_space-other_T2star_gmseg-manual.json => sub-tokyo750w06_space-other_T2star_gmlabel-SC_seg.json} (100%) rename derivatives/labels/sub-tokyo750w06/anat/{sub-tokyo750w06_space-other_T2star_gmseg-manual.nii.gz => sub-tokyo750w06_space-other_T2star_gmlabel-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-tokyo750w06/anat/{sub-tokyo750w06_space-other_T2star_seg-manual.json => sub-tokyo750w06_space-other_T2star_label-SC_seg.json} (100%) rename derivatives/labels/sub-tokyo750w06/anat/{sub-tokyo750w06_space-other_T2star_seg-manual.nii.gz => sub-tokyo750w06_space-other_T2star_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-tokyo750w06/anat/{sub-tokyo750w06_space-other_T2w_seg-manual.json => sub-tokyo750w06_space-other_T2w_label-SC_seg.json} (100%) rename derivatives/labels/sub-tokyo750w06/anat/{sub-tokyo750w06_space-other_T2w_seg-manual.nii.gz => sub-tokyo750w06_space-other_T2w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-tokyo750w06/anat/{sub-tokyo750w06_space-other_T2w_labels-disc-manual.json => sub-tokyo750w06_space-other_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-tokyo750w06/anat/{sub-tokyo750w06_space-other_T2w_labels-disc-manual.nii.gz => sub-tokyo750w06_space-other_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-tokyo750w06/dwi/{sub-tokyo750w06_rec-average_dwi_seg-manual.json => sub-tokyo750w06_rec-average_dwi_label-SC_seg.json} (100%) rename derivatives/labels/sub-tokyo750w06/dwi/{sub-tokyo750w06_rec-average_dwi_seg-manual.nii.gz => sub-tokyo750w06_rec-average_dwi_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-tokyo750w07/anat/{sub-tokyo750w07_flip-1_mt-on_space-other_MTS_seg-manual.json => sub-tokyo750w07_flip-1_mt-on_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-tokyo750w07/anat/{sub-tokyo750w07_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz => sub-tokyo750w07_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-tokyo750w07/anat/{sub-tokyo750w07_flip-2_mt-off_space-other_MTS_seg-manual.json => sub-tokyo750w07_flip-2_mt-off_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-tokyo750w07/anat/{sub-tokyo750w07_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz => sub-tokyo750w07_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-tokyo750w07/anat/{sub-tokyo750w07_space-other_T1w_seg-manual.json => sub-tokyo750w07_space-other_T1w_label-SC_seg.json} (100%) rename derivatives/labels/sub-tokyo750w07/anat/{sub-tokyo750w07_space-other_T1w_seg-manual.nii.gz => sub-tokyo750w07_space-other_T1w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-tokyo750w07/anat/{sub-tokyo750w07_space-other_T1w_labels-disc-manual.json => sub-tokyo750w07_space-other_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-tokyo750w07/anat/{sub-tokyo750w07_space-other_T1w_labels-disc-manual.nii.gz => sub-tokyo750w07_space-other_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-tokyo750w07/anat/{sub-tokyo750w07_space-other_T2star_seg-manual.json => sub-tokyo750w07_space-other_T2star_label-SC_seg.json} (100%) rename derivatives/labels/sub-tokyo750w07/anat/{sub-tokyo750w07_space-other_T2star_seg-manual.nii.gz => sub-tokyo750w07_space-other_T2star_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-tokyo750w07/anat/{sub-tokyo750w07_space-other_T2w_seg-manual.json => sub-tokyo750w07_space-other_T2w_label-SC_seg.json} (100%) rename derivatives/labels/sub-tokyo750w07/anat/{sub-tokyo750w07_space-other_T2w_seg-manual.nii.gz => sub-tokyo750w07_space-other_T2w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-tokyo750w07/anat/{sub-tokyo750w07_space-other_T2w_labels-disc-manual.json => sub-tokyo750w07_space-other_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-tokyo750w07/anat/{sub-tokyo750w07_space-other_T2w_labels-disc-manual.nii.gz => sub-tokyo750w07_space-other_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-tokyo750w07/dwi/{sub-tokyo750w07_rec-average_dwi_seg-manual.json => sub-tokyo750w07_rec-average_dwi_label-SC_seg.json} (100%) rename derivatives/labels/sub-tokyo750w07/dwi/{sub-tokyo750w07_rec-average_dwi_seg-manual.nii.gz => sub-tokyo750w07_rec-average_dwi_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-tokyoIngenia01/anat/{sub-tokyoIngenia01_flip-1_mt-on_space-other_MTS_seg-manual.json => sub-tokyoIngenia01_flip-1_mt-on_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-tokyoIngenia01/anat/{sub-tokyoIngenia01_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz => sub-tokyoIngenia01_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-tokyoIngenia01/anat/{sub-tokyoIngenia01_flip-2_mt-off_space-other_MTS_seg-manual.json => sub-tokyoIngenia01_flip-2_mt-off_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-tokyoIngenia01/anat/{sub-tokyoIngenia01_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz => sub-tokyoIngenia01_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-tokyoIngenia01/anat/{sub-tokyoIngenia01_space-other_T1w_seg-manual.json => sub-tokyoIngenia01_space-other_T1w_label-SC_seg.json} (100%) rename derivatives/labels/sub-tokyoIngenia01/anat/{sub-tokyoIngenia01_space-other_T1w_seg-manual.nii.gz => sub-tokyoIngenia01_space-other_T1w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-tokyoIngenia01/anat/{sub-tokyoIngenia01_space-other_T1w_labels-disc-manual.json => sub-tokyoIngenia01_space-other_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-tokyoIngenia01/anat/{sub-tokyoIngenia01_space-other_T1w_labels-disc-manual.nii.gz => sub-tokyoIngenia01_space-other_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-tokyoIngenia01/anat/{sub-tokyoIngenia01_space-other_T2star_gmseg-manual.json => sub-tokyoIngenia01_space-other_T2star_gmlabel-SC_seg.json} (100%) rename derivatives/labels/sub-tokyoIngenia01/anat/{sub-tokyoIngenia01_space-other_T2star_gmseg-manual.nii.gz => sub-tokyoIngenia01_space-other_T2star_gmlabel-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-tokyoIngenia01/anat/{sub-tokyoIngenia01_space-other_T2star_seg-manual.json => sub-tokyoIngenia01_space-other_T2star_label-SC_seg.json} (100%) rename derivatives/labels/sub-tokyoIngenia01/anat/{sub-tokyoIngenia01_space-other_T2star_seg-manual.nii.gz => sub-tokyoIngenia01_space-other_T2star_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-tokyoIngenia01/anat/{sub-tokyoIngenia01_space-other_T2w_seg-manual.json => sub-tokyoIngenia01_space-other_T2w_label-SC_seg.json} (100%) rename derivatives/labels/sub-tokyoIngenia01/anat/{sub-tokyoIngenia01_space-other_T2w_seg-manual.nii.gz => sub-tokyoIngenia01_space-other_T2w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-tokyoIngenia01/anat/{sub-tokyoIngenia01_space-other_T2w_labels-disc-manual.json => sub-tokyoIngenia01_space-other_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-tokyoIngenia01/anat/{sub-tokyoIngenia01_space-other_T2w_labels-disc-manual.nii.gz => sub-tokyoIngenia01_space-other_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-tokyoIngenia01/dwi/{sub-tokyoIngenia01_rec-average_dwi_seg-manual.json => sub-tokyoIngenia01_rec-average_dwi_label-SC_seg.json} (100%) rename derivatives/labels/sub-tokyoIngenia01/dwi/{sub-tokyoIngenia01_rec-average_dwi_seg-manual.nii.gz => sub-tokyoIngenia01_rec-average_dwi_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-tokyoIngenia02/anat/{sub-tokyoIngenia02_flip-1_mt-on_space-other_MTS_seg-manual.json => sub-tokyoIngenia02_flip-1_mt-on_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-tokyoIngenia02/anat/{sub-tokyoIngenia02_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz => sub-tokyoIngenia02_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-tokyoIngenia02/anat/{sub-tokyoIngenia02_flip-2_mt-off_space-other_MTS_seg-manual.json => sub-tokyoIngenia02_flip-2_mt-off_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-tokyoIngenia02/anat/{sub-tokyoIngenia02_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz => sub-tokyoIngenia02_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-tokyoIngenia02/anat/{sub-tokyoIngenia02_space-other_T1w_seg-manual.json => sub-tokyoIngenia02_space-other_T1w_label-SC_seg.json} (100%) rename derivatives/labels/sub-tokyoIngenia02/anat/{sub-tokyoIngenia02_space-other_T1w_seg-manual.nii.gz => sub-tokyoIngenia02_space-other_T1w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-tokyoIngenia02/anat/{sub-tokyoIngenia02_space-other_T1w_labels-disc-manual.json => sub-tokyoIngenia02_space-other_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-tokyoIngenia02/anat/{sub-tokyoIngenia02_space-other_T1w_labels-disc-manual.nii.gz => sub-tokyoIngenia02_space-other_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-tokyoIngenia02/anat/{sub-tokyoIngenia02_space-other_T2star_gmseg-manual.json => sub-tokyoIngenia02_space-other_T2star_gmlabel-SC_seg.json} (100%) rename derivatives/labels/sub-tokyoIngenia02/anat/{sub-tokyoIngenia02_space-other_T2star_gmseg-manual.nii.gz => sub-tokyoIngenia02_space-other_T2star_gmlabel-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-tokyoIngenia02/anat/{sub-tokyoIngenia02_space-other_T2star_seg-manual.json => sub-tokyoIngenia02_space-other_T2star_label-SC_seg.json} (100%) rename derivatives/labels/sub-tokyoIngenia02/anat/{sub-tokyoIngenia02_space-other_T2star_seg-manual.nii.gz => sub-tokyoIngenia02_space-other_T2star_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-tokyoIngenia02/anat/{sub-tokyoIngenia02_space-other_T2w_seg-manual.json => sub-tokyoIngenia02_space-other_T2w_label-SC_seg.json} (100%) rename derivatives/labels/sub-tokyoIngenia02/anat/{sub-tokyoIngenia02_space-other_T2w_seg-manual.nii.gz => sub-tokyoIngenia02_space-other_T2w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-tokyoIngenia02/anat/{sub-tokyoIngenia02_space-other_T2w_labels-disc-manual.json => sub-tokyoIngenia02_space-other_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-tokyoIngenia02/anat/{sub-tokyoIngenia02_space-other_T2w_labels-disc-manual.nii.gz => sub-tokyoIngenia02_space-other_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-tokyoIngenia02/dwi/{sub-tokyoIngenia02_rec-average_dwi_seg-manual.json => sub-tokyoIngenia02_rec-average_dwi_label-SC_seg.json} (100%) rename derivatives/labels/sub-tokyoIngenia02/dwi/{sub-tokyoIngenia02_rec-average_dwi_seg-manual.nii.gz => sub-tokyoIngenia02_rec-average_dwi_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-tokyoIngenia03/anat/{sub-tokyoIngenia03_flip-1_mt-on_space-other_MTS_seg-manual.json => sub-tokyoIngenia03_flip-1_mt-on_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-tokyoIngenia03/anat/{sub-tokyoIngenia03_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz => sub-tokyoIngenia03_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-tokyoIngenia03/anat/{sub-tokyoIngenia03_flip-2_mt-off_space-other_MTS_seg-manual.json => sub-tokyoIngenia03_flip-2_mt-off_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-tokyoIngenia03/anat/{sub-tokyoIngenia03_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz => sub-tokyoIngenia03_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-tokyoIngenia03/anat/{sub-tokyoIngenia03_space-other_T1w_seg-manual.json => sub-tokyoIngenia03_space-other_T1w_label-SC_seg.json} (100%) rename derivatives/labels/sub-tokyoIngenia03/anat/{sub-tokyoIngenia03_space-other_T1w_seg-manual.nii.gz => sub-tokyoIngenia03_space-other_T1w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-tokyoIngenia03/anat/{sub-tokyoIngenia03_space-other_T1w_labels-disc-manual.json => sub-tokyoIngenia03_space-other_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-tokyoIngenia03/anat/{sub-tokyoIngenia03_space-other_T1w_labels-disc-manual.nii.gz => sub-tokyoIngenia03_space-other_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-tokyoIngenia03/anat/{sub-tokyoIngenia03_space-other_T2star_gmseg-manual.json => sub-tokyoIngenia03_space-other_T2star_gmlabel-SC_seg.json} (100%) rename derivatives/labels/sub-tokyoIngenia03/anat/{sub-tokyoIngenia03_space-other_T2star_gmseg-manual.nii.gz => sub-tokyoIngenia03_space-other_T2star_gmlabel-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-tokyoIngenia03/anat/{sub-tokyoIngenia03_space-other_T2star_seg-manual.json => sub-tokyoIngenia03_space-other_T2star_label-SC_seg.json} (100%) rename derivatives/labels/sub-tokyoIngenia03/anat/{sub-tokyoIngenia03_space-other_T2star_seg-manual.nii.gz => sub-tokyoIngenia03_space-other_T2star_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-tokyoIngenia03/anat/{sub-tokyoIngenia03_space-other_T2w_seg-manual.json => sub-tokyoIngenia03_space-other_T2w_label-SC_seg.json} (100%) rename derivatives/labels/sub-tokyoIngenia03/anat/{sub-tokyoIngenia03_space-other_T2w_seg-manual.nii.gz => sub-tokyoIngenia03_space-other_T2w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-tokyoIngenia03/anat/{sub-tokyoIngenia03_space-other_T2w_labels-disc-manual.json => sub-tokyoIngenia03_space-other_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-tokyoIngenia03/anat/{sub-tokyoIngenia03_space-other_T2w_labels-disc-manual.nii.gz => sub-tokyoIngenia03_space-other_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-tokyoIngenia03/dwi/{sub-tokyoIngenia03_rec-average_dwi_seg-manual.json => sub-tokyoIngenia03_rec-average_dwi_label-SC_seg.json} (100%) rename derivatives/labels/sub-tokyoIngenia03/dwi/{sub-tokyoIngenia03_rec-average_dwi_seg-manual.nii.gz => sub-tokyoIngenia03_rec-average_dwi_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-tokyoIngenia04/anat/{sub-tokyoIngenia04_flip-1_mt-on_space-other_MTS_seg-manual.json => sub-tokyoIngenia04_flip-1_mt-on_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-tokyoIngenia04/anat/{sub-tokyoIngenia04_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz => sub-tokyoIngenia04_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-tokyoIngenia04/anat/{sub-tokyoIngenia04_flip-2_mt-off_space-other_MTS_seg-manual.json => sub-tokyoIngenia04_flip-2_mt-off_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-tokyoIngenia04/anat/{sub-tokyoIngenia04_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz => sub-tokyoIngenia04_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-tokyoIngenia04/anat/{sub-tokyoIngenia04_space-other_T1w_seg-manual.json => sub-tokyoIngenia04_space-other_T1w_label-SC_seg.json} (100%) rename derivatives/labels/sub-tokyoIngenia04/anat/{sub-tokyoIngenia04_space-other_T1w_seg-manual.nii.gz => sub-tokyoIngenia04_space-other_T1w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-tokyoIngenia04/anat/{sub-tokyoIngenia04_space-other_T1w_labels-disc-manual.json => sub-tokyoIngenia04_space-other_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-tokyoIngenia04/anat/{sub-tokyoIngenia04_space-other_T1w_labels-disc-manual.nii.gz => sub-tokyoIngenia04_space-other_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-tokyoIngenia04/anat/{sub-tokyoIngenia04_space-other_T2star_gmseg-manual.json => sub-tokyoIngenia04_space-other_T2star_gmlabel-SC_seg.json} (100%) rename derivatives/labels/sub-tokyoIngenia04/anat/{sub-tokyoIngenia04_space-other_T2star_gmseg-manual.nii.gz => sub-tokyoIngenia04_space-other_T2star_gmlabel-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-tokyoIngenia04/anat/{sub-tokyoIngenia04_space-other_T2star_seg-manual.json => sub-tokyoIngenia04_space-other_T2star_label-SC_seg.json} (100%) rename derivatives/labels/sub-tokyoIngenia04/anat/{sub-tokyoIngenia04_space-other_T2star_seg-manual.nii.gz => sub-tokyoIngenia04_space-other_T2star_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-tokyoIngenia04/anat/{sub-tokyoIngenia04_space-other_T2w_seg-manual.json => sub-tokyoIngenia04_space-other_T2w_label-SC_seg.json} (100%) rename derivatives/labels/sub-tokyoIngenia04/anat/{sub-tokyoIngenia04_space-other_T2w_seg-manual.nii.gz => sub-tokyoIngenia04_space-other_T2w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-tokyoIngenia04/anat/{sub-tokyoIngenia04_space-other_T2w_labels-disc-manual.json => sub-tokyoIngenia04_space-other_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-tokyoIngenia04/anat/{sub-tokyoIngenia04_space-other_T2w_labels-disc-manual.nii.gz => sub-tokyoIngenia04_space-other_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-tokyoIngenia04/dwi/{sub-tokyoIngenia04_rec-average_dwi_seg-manual.json => sub-tokyoIngenia04_rec-average_dwi_label-SC_seg.json} (100%) rename derivatives/labels/sub-tokyoIngenia04/dwi/{sub-tokyoIngenia04_rec-average_dwi_seg-manual.nii.gz => sub-tokyoIngenia04_rec-average_dwi_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-tokyoIngenia05/anat/{sub-tokyoIngenia05_flip-1_mt-on_space-other_MTS_seg-manual.json => sub-tokyoIngenia05_flip-1_mt-on_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-tokyoIngenia05/anat/{sub-tokyoIngenia05_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz => sub-tokyoIngenia05_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-tokyoIngenia05/anat/{sub-tokyoIngenia05_flip-2_mt-off_space-other_MTS_seg-manual.json => sub-tokyoIngenia05_flip-2_mt-off_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-tokyoIngenia05/anat/{sub-tokyoIngenia05_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz => sub-tokyoIngenia05_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-tokyoIngenia05/anat/{sub-tokyoIngenia05_space-other_T1w_seg-manual.json => sub-tokyoIngenia05_space-other_T1w_label-SC_seg.json} (100%) rename derivatives/labels/sub-tokyoIngenia05/anat/{sub-tokyoIngenia05_space-other_T1w_seg-manual.nii.gz => sub-tokyoIngenia05_space-other_T1w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-tokyoIngenia05/anat/{sub-tokyoIngenia05_space-other_T1w_labels-disc-manual.json => sub-tokyoIngenia05_space-other_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-tokyoIngenia05/anat/{sub-tokyoIngenia05_space-other_T1w_labels-disc-manual.nii.gz => sub-tokyoIngenia05_space-other_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-tokyoIngenia05/anat/{sub-tokyoIngenia05_space-other_T2star_seg-manual.json => sub-tokyoIngenia05_space-other_T2star_label-SC_seg.json} (100%) rename derivatives/labels/sub-tokyoIngenia05/anat/{sub-tokyoIngenia05_space-other_T2star_seg-manual.nii.gz => sub-tokyoIngenia05_space-other_T2star_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-tokyoIngenia05/anat/{sub-tokyoIngenia05_space-other_T2w_csfseg-manual.json => sub-tokyoIngenia05_space-other_T2w_csflabel-SC_seg.json} (100%) rename derivatives/labels/sub-tokyoIngenia05/anat/{sub-tokyoIngenia05_space-other_T2w_csfseg-manual.nii.gz => sub-tokyoIngenia05_space-other_T2w_csflabel-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-tokyoIngenia05/anat/{sub-tokyoIngenia05_space-other_T2w_seg-manual.json => sub-tokyoIngenia05_space-other_T2w_label-SC_seg.json} (100%) rename derivatives/labels/sub-tokyoIngenia05/anat/{sub-tokyoIngenia05_space-other_T2w_seg-manual.nii.gz => sub-tokyoIngenia05_space-other_T2w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-tokyoIngenia05/anat/{sub-tokyoIngenia05_space-other_T2w_labels-disc-manual.json => sub-tokyoIngenia05_space-other_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-tokyoIngenia05/anat/{sub-tokyoIngenia05_space-other_T2w_labels-disc-manual.nii.gz => sub-tokyoIngenia05_space-other_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-tokyoIngenia05/dwi/{sub-tokyoIngenia05_rec-average_dwi_seg-manual.json => sub-tokyoIngenia05_rec-average_dwi_label-SC_seg.json} (100%) rename derivatives/labels/sub-tokyoIngenia05/dwi/{sub-tokyoIngenia05_rec-average_dwi_seg-manual.nii.gz => sub-tokyoIngenia05_rec-average_dwi_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-tokyoIngenia06/anat/{sub-tokyoIngenia06_flip-1_mt-on_space-other_MTS_seg-manual.json => sub-tokyoIngenia06_flip-1_mt-on_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-tokyoIngenia06/anat/{sub-tokyoIngenia06_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz => sub-tokyoIngenia06_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-tokyoIngenia06/anat/{sub-tokyoIngenia06_flip-2_mt-off_space-other_MTS_seg-manual.json => sub-tokyoIngenia06_flip-2_mt-off_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-tokyoIngenia06/anat/{sub-tokyoIngenia06_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz => sub-tokyoIngenia06_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-tokyoIngenia06/anat/{sub-tokyoIngenia06_space-other_T1w_seg-manual.json => sub-tokyoIngenia06_space-other_T1w_label-SC_seg.json} (100%) rename derivatives/labels/sub-tokyoIngenia06/anat/{sub-tokyoIngenia06_space-other_T1w_seg-manual.nii.gz => sub-tokyoIngenia06_space-other_T1w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-tokyoIngenia06/anat/{sub-tokyoIngenia06_space-other_T1w_labels-disc-manual.json => sub-tokyoIngenia06_space-other_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-tokyoIngenia06/anat/{sub-tokyoIngenia06_space-other_T1w_labels-disc-manual.nii.gz => sub-tokyoIngenia06_space-other_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-tokyoIngenia06/anat/{sub-tokyoIngenia06_space-other_T2star_seg-manual.json => sub-tokyoIngenia06_space-other_T2star_label-SC_seg.json} (100%) rename derivatives/labels/sub-tokyoIngenia06/anat/{sub-tokyoIngenia06_space-other_T2star_seg-manual.nii.gz => sub-tokyoIngenia06_space-other_T2star_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-tokyoIngenia06/anat/{sub-tokyoIngenia06_space-other_T2w_csfseg-manual.json => sub-tokyoIngenia06_space-other_T2w_csflabel-SC_seg.json} (100%) rename derivatives/labels/sub-tokyoIngenia06/anat/{sub-tokyoIngenia06_space-other_T2w_csfseg-manual.nii.gz => sub-tokyoIngenia06_space-other_T2w_csflabel-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-tokyoIngenia06/anat/{sub-tokyoIngenia06_space-other_T2w_seg-manual.json => sub-tokyoIngenia06_space-other_T2w_label-SC_seg.json} (100%) rename derivatives/labels/sub-tokyoIngenia06/anat/{sub-tokyoIngenia06_space-other_T2w_seg-manual.nii.gz => sub-tokyoIngenia06_space-other_T2w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-tokyoIngenia06/anat/{sub-tokyoIngenia06_space-other_T2w_labels-disc-manual.json => sub-tokyoIngenia06_space-other_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-tokyoIngenia06/anat/{sub-tokyoIngenia06_space-other_T2w_labels-disc-manual.nii.gz => sub-tokyoIngenia06_space-other_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-tokyoIngenia06/dwi/{sub-tokyoIngenia06_rec-average_dwi_seg-manual.json => sub-tokyoIngenia06_rec-average_dwi_label-SC_seg.json} (100%) rename derivatives/labels/sub-tokyoIngenia06/dwi/{sub-tokyoIngenia06_rec-average_dwi_seg-manual.nii.gz => sub-tokyoIngenia06_rec-average_dwi_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-tokyoIngenia07/anat/{sub-tokyoIngenia07_flip-1_mt-on_space-other_MTS_seg-manual.json => sub-tokyoIngenia07_flip-1_mt-on_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-tokyoIngenia07/anat/{sub-tokyoIngenia07_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz => sub-tokyoIngenia07_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-tokyoIngenia07/anat/{sub-tokyoIngenia07_flip-2_mt-off_space-other_MTS_seg-manual.json => sub-tokyoIngenia07_flip-2_mt-off_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-tokyoIngenia07/anat/{sub-tokyoIngenia07_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz => sub-tokyoIngenia07_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-tokyoIngenia07/anat/{sub-tokyoIngenia07_space-other_T1w_seg-manual.json => sub-tokyoIngenia07_space-other_T1w_label-SC_seg.json} (100%) rename derivatives/labels/sub-tokyoIngenia07/anat/{sub-tokyoIngenia07_space-other_T1w_seg-manual.nii.gz => sub-tokyoIngenia07_space-other_T1w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-tokyoIngenia07/anat/{sub-tokyoIngenia07_space-other_T1w_labels-disc-manual.json => sub-tokyoIngenia07_space-other_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-tokyoIngenia07/anat/{sub-tokyoIngenia07_space-other_T1w_labels-disc-manual.nii.gz => sub-tokyoIngenia07_space-other_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-tokyoIngenia07/anat/{sub-tokyoIngenia07_space-other_T2star_seg-manual.json => sub-tokyoIngenia07_space-other_T2star_label-SC_seg.json} (100%) rename derivatives/labels/sub-tokyoIngenia07/anat/{sub-tokyoIngenia07_space-other_T2star_seg-manual.nii.gz => sub-tokyoIngenia07_space-other_T2star_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-tokyoIngenia07/anat/{sub-tokyoIngenia07_space-other_T2w_seg-manual.json => sub-tokyoIngenia07_space-other_T2w_label-SC_seg.json} (100%) rename derivatives/labels/sub-tokyoIngenia07/anat/{sub-tokyoIngenia07_space-other_T2w_seg-manual.nii.gz => sub-tokyoIngenia07_space-other_T2w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-tokyoIngenia07/anat/{sub-tokyoIngenia07_space-other_T2w_labels-disc-manual.json => sub-tokyoIngenia07_space-other_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-tokyoIngenia07/anat/{sub-tokyoIngenia07_space-other_T2w_labels-disc-manual.nii.gz => sub-tokyoIngenia07_space-other_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-tokyoIngenia07/dwi/{sub-tokyoIngenia07_rec-average_dwi_seg-manual.json => sub-tokyoIngenia07_rec-average_dwi_label-SC_seg.json} (100%) rename derivatives/labels/sub-tokyoIngenia07/dwi/{sub-tokyoIngenia07_rec-average_dwi_seg-manual.nii.gz => sub-tokyoIngenia07_rec-average_dwi_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-tokyoSkyra01/anat/{sub-tokyoSkyra01_flip-1_mt-on_space-other_MTS_seg-manual.json => sub-tokyoSkyra01_flip-1_mt-on_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-tokyoSkyra01/anat/{sub-tokyoSkyra01_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz => sub-tokyoSkyra01_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-tokyoSkyra01/anat/{sub-tokyoSkyra01_flip-2_mt-off_space-other_MTS_seg-manual.json => sub-tokyoSkyra01_flip-2_mt-off_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-tokyoSkyra01/anat/{sub-tokyoSkyra01_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz => sub-tokyoSkyra01_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-tokyoSkyra01/anat/{sub-tokyoSkyra01_space-other_T1w_seg-manual.json => sub-tokyoSkyra01_space-other_T1w_label-SC_seg.json} (100%) rename derivatives/labels/sub-tokyoSkyra01/anat/{sub-tokyoSkyra01_space-other_T1w_seg-manual.nii.gz => sub-tokyoSkyra01_space-other_T1w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-tokyoSkyra01/anat/{sub-tokyoSkyra01_space-other_T1w_labels-disc-manual.json => sub-tokyoSkyra01_space-other_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-tokyoSkyra01/anat/{sub-tokyoSkyra01_space-other_T1w_labels-disc-manual.nii.gz => sub-tokyoSkyra01_space-other_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-tokyoSkyra01/anat/{sub-tokyoSkyra01_space-other_T2star_seg-manual.json => sub-tokyoSkyra01_space-other_T2star_label-SC_seg.json} (100%) rename derivatives/labels/sub-tokyoSkyra01/anat/{sub-tokyoSkyra01_space-other_T2star_seg-manual.nii.gz => sub-tokyoSkyra01_space-other_T2star_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-tokyoSkyra01/anat/{sub-tokyoSkyra01_space-other_T2w_seg-manual.json => sub-tokyoSkyra01_space-other_T2w_label-SC_seg.json} (100%) rename derivatives/labels/sub-tokyoSkyra01/anat/{sub-tokyoSkyra01_space-other_T2w_seg-manual.nii.gz => sub-tokyoSkyra01_space-other_T2w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-tokyoSkyra01/anat/{sub-tokyoSkyra01_space-other_T2w_labels-disc-manual.json => sub-tokyoSkyra01_space-other_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-tokyoSkyra01/anat/{sub-tokyoSkyra01_space-other_T2w_labels-disc-manual.nii.gz => sub-tokyoSkyra01_space-other_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-tokyoSkyra01/dwi/{sub-tokyoSkyra01_rec-average_dwi_seg-manual.json => sub-tokyoSkyra01_rec-average_dwi_label-SC_seg.json} (100%) rename derivatives/labels/sub-tokyoSkyra01/dwi/{sub-tokyoSkyra01_rec-average_dwi_seg-manual.nii.gz => sub-tokyoSkyra01_rec-average_dwi_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-tokyoSkyra02/anat/{sub-tokyoSkyra02_flip-1_mt-on_space-other_MTS_seg-manual.json => sub-tokyoSkyra02_flip-1_mt-on_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-tokyoSkyra02/anat/{sub-tokyoSkyra02_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz => sub-tokyoSkyra02_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-tokyoSkyra02/anat/{sub-tokyoSkyra02_flip-2_mt-off_space-other_MTS_seg-manual.json => sub-tokyoSkyra02_flip-2_mt-off_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-tokyoSkyra02/anat/{sub-tokyoSkyra02_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz => sub-tokyoSkyra02_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-tokyoSkyra02/anat/{sub-tokyoSkyra02_space-other_T1w_seg-manual.json => sub-tokyoSkyra02_space-other_T1w_label-SC_seg.json} (100%) rename derivatives/labels/sub-tokyoSkyra02/anat/{sub-tokyoSkyra02_space-other_T1w_seg-manual.nii.gz => sub-tokyoSkyra02_space-other_T1w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-tokyoSkyra02/anat/{sub-tokyoSkyra02_space-other_T1w_labels-disc-manual.json => sub-tokyoSkyra02_space-other_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-tokyoSkyra02/anat/{sub-tokyoSkyra02_space-other_T1w_labels-disc-manual.nii.gz => sub-tokyoSkyra02_space-other_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-tokyoSkyra02/anat/{sub-tokyoSkyra02_space-other_T2star_seg-manual.json => sub-tokyoSkyra02_space-other_T2star_label-SC_seg.json} (100%) rename derivatives/labels/sub-tokyoSkyra02/anat/{sub-tokyoSkyra02_space-other_T2star_seg-manual.nii.gz => sub-tokyoSkyra02_space-other_T2star_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-tokyoSkyra02/anat/{sub-tokyoSkyra02_space-other_T2w_seg-manual.json => sub-tokyoSkyra02_space-other_T2w_label-SC_seg.json} (100%) rename derivatives/labels/sub-tokyoSkyra02/anat/{sub-tokyoSkyra02_space-other_T2w_seg-manual.nii.gz => sub-tokyoSkyra02_space-other_T2w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-tokyoSkyra02/anat/{sub-tokyoSkyra02_space-other_T2w_labels-disc-manual.json => sub-tokyoSkyra02_space-other_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-tokyoSkyra02/anat/{sub-tokyoSkyra02_space-other_T2w_labels-disc-manual.nii.gz => sub-tokyoSkyra02_space-other_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-tokyoSkyra02/dwi/{sub-tokyoSkyra02_rec-average_dwi_seg-manual.json => sub-tokyoSkyra02_rec-average_dwi_label-SC_seg.json} (100%) rename derivatives/labels/sub-tokyoSkyra02/dwi/{sub-tokyoSkyra02_rec-average_dwi_seg-manual.nii.gz => sub-tokyoSkyra02_rec-average_dwi_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-tokyoSkyra03/anat/{sub-tokyoSkyra03_flip-1_mt-on_space-other_MTS_seg-manual.json => sub-tokyoSkyra03_flip-1_mt-on_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-tokyoSkyra03/anat/{sub-tokyoSkyra03_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz => sub-tokyoSkyra03_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-tokyoSkyra03/anat/{sub-tokyoSkyra03_flip-2_mt-off_space-other_MTS_seg-manual.json => sub-tokyoSkyra03_flip-2_mt-off_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-tokyoSkyra03/anat/{sub-tokyoSkyra03_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz => sub-tokyoSkyra03_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-tokyoSkyra03/anat/{sub-tokyoSkyra03_space-other_T1w_seg-manual.json => sub-tokyoSkyra03_space-other_T1w_label-SC_seg.json} (100%) rename derivatives/labels/sub-tokyoSkyra03/anat/{sub-tokyoSkyra03_space-other_T1w_seg-manual.nii.gz => sub-tokyoSkyra03_space-other_T1w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-tokyoSkyra03/anat/{sub-tokyoSkyra03_space-other_T1w_labels-disc-manual.json => sub-tokyoSkyra03_space-other_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-tokyoSkyra03/anat/{sub-tokyoSkyra03_space-other_T1w_labels-disc-manual.nii.gz => sub-tokyoSkyra03_space-other_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-tokyoSkyra03/anat/{sub-tokyoSkyra03_space-other_T2star_gmseg-manual.json => sub-tokyoSkyra03_space-other_T2star_gmlabel-SC_seg.json} (100%) rename derivatives/labels/sub-tokyoSkyra03/anat/{sub-tokyoSkyra03_space-other_T2star_gmseg-manual.nii.gz => sub-tokyoSkyra03_space-other_T2star_gmlabel-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-tokyoSkyra03/anat/{sub-tokyoSkyra03_space-other_T2star_seg-manual.json => sub-tokyoSkyra03_space-other_T2star_label-SC_seg.json} (100%) rename derivatives/labels/sub-tokyoSkyra03/anat/{sub-tokyoSkyra03_space-other_T2star_seg-manual.nii.gz => sub-tokyoSkyra03_space-other_T2star_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-tokyoSkyra03/anat/{sub-tokyoSkyra03_space-other_T2w_seg-manual.json => sub-tokyoSkyra03_space-other_T2w_label-SC_seg.json} (100%) rename derivatives/labels/sub-tokyoSkyra03/anat/{sub-tokyoSkyra03_space-other_T2w_seg-manual.nii.gz => sub-tokyoSkyra03_space-other_T2w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-tokyoSkyra03/anat/{sub-tokyoSkyra03_space-other_T2w_labels-disc-manual.json => sub-tokyoSkyra03_space-other_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-tokyoSkyra03/anat/{sub-tokyoSkyra03_space-other_T2w_labels-disc-manual.nii.gz => sub-tokyoSkyra03_space-other_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-tokyoSkyra03/dwi/{sub-tokyoSkyra03_rec-average_dwi_seg-manual.json => sub-tokyoSkyra03_rec-average_dwi_label-SC_seg.json} (100%) rename derivatives/labels/sub-tokyoSkyra03/dwi/{sub-tokyoSkyra03_rec-average_dwi_seg-manual.nii.gz => sub-tokyoSkyra03_rec-average_dwi_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-tokyoSkyra04/anat/{sub-tokyoSkyra04_flip-1_mt-on_space-other_MTS_seg-manual.json => sub-tokyoSkyra04_flip-1_mt-on_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-tokyoSkyra04/anat/{sub-tokyoSkyra04_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz => sub-tokyoSkyra04_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-tokyoSkyra04/anat/{sub-tokyoSkyra04_flip-2_mt-off_space-other_MTS_seg-manual.json => sub-tokyoSkyra04_flip-2_mt-off_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-tokyoSkyra04/anat/{sub-tokyoSkyra04_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz => sub-tokyoSkyra04_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-tokyoSkyra04/anat/{sub-tokyoSkyra04_space-other_T1w_seg-manual.json => sub-tokyoSkyra04_space-other_T1w_label-SC_seg.json} (100%) rename derivatives/labels/sub-tokyoSkyra04/anat/{sub-tokyoSkyra04_space-other_T1w_seg-manual.nii.gz => sub-tokyoSkyra04_space-other_T1w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-tokyoSkyra04/anat/{sub-tokyoSkyra04_space-other_T1w_labels-disc-manual.json => sub-tokyoSkyra04_space-other_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-tokyoSkyra04/anat/{sub-tokyoSkyra04_space-other_T1w_labels-disc-manual.nii.gz => sub-tokyoSkyra04_space-other_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-tokyoSkyra04/anat/{sub-tokyoSkyra04_space-other_T2star_gmseg-manual.json => sub-tokyoSkyra04_space-other_T2star_gmlabel-SC_seg.json} (100%) rename derivatives/labels/sub-tokyoSkyra04/anat/{sub-tokyoSkyra04_space-other_T2star_gmseg-manual.nii.gz => sub-tokyoSkyra04_space-other_T2star_gmlabel-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-tokyoSkyra04/anat/{sub-tokyoSkyra04_space-other_T2star_seg-manual.json => sub-tokyoSkyra04_space-other_T2star_label-SC_seg.json} (100%) rename derivatives/labels/sub-tokyoSkyra04/anat/{sub-tokyoSkyra04_space-other_T2star_seg-manual.nii.gz => sub-tokyoSkyra04_space-other_T2star_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-tokyoSkyra04/anat/{sub-tokyoSkyra04_space-other_T2w_seg-manual.json => sub-tokyoSkyra04_space-other_T2w_label-SC_seg.json} (100%) rename derivatives/labels/sub-tokyoSkyra04/anat/{sub-tokyoSkyra04_space-other_T2w_seg-manual.nii.gz => sub-tokyoSkyra04_space-other_T2w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-tokyoSkyra04/anat/{sub-tokyoSkyra04_space-other_T2w_labels-disc-manual.json => sub-tokyoSkyra04_space-other_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-tokyoSkyra04/anat/{sub-tokyoSkyra04_space-other_T2w_labels-disc-manual.nii.gz => sub-tokyoSkyra04_space-other_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-tokyoSkyra04/dwi/{sub-tokyoSkyra04_rec-average_dwi_seg-manual.json => sub-tokyoSkyra04_rec-average_dwi_label-SC_seg.json} (100%) rename derivatives/labels/sub-tokyoSkyra04/dwi/{sub-tokyoSkyra04_rec-average_dwi_seg-manual.nii.gz => sub-tokyoSkyra04_rec-average_dwi_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-tokyoSkyra05/anat/{sub-tokyoSkyra05_flip-1_mt-on_space-other_MTS_seg-manual.json => sub-tokyoSkyra05_flip-1_mt-on_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-tokyoSkyra05/anat/{sub-tokyoSkyra05_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz => sub-tokyoSkyra05_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-tokyoSkyra05/anat/{sub-tokyoSkyra05_flip-2_mt-off_space-other_MTS_seg-manual.json => sub-tokyoSkyra05_flip-2_mt-off_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-tokyoSkyra05/anat/{sub-tokyoSkyra05_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz => sub-tokyoSkyra05_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-tokyoSkyra05/anat/{sub-tokyoSkyra05_space-other_T1w_seg-manual.json => sub-tokyoSkyra05_space-other_T1w_label-SC_seg.json} (100%) rename derivatives/labels/sub-tokyoSkyra05/anat/{sub-tokyoSkyra05_space-other_T1w_seg-manual.nii.gz => sub-tokyoSkyra05_space-other_T1w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-tokyoSkyra05/anat/{sub-tokyoSkyra05_space-other_T1w_labels-disc-manual.json => sub-tokyoSkyra05_space-other_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-tokyoSkyra05/anat/{sub-tokyoSkyra05_space-other_T1w_labels-disc-manual.nii.gz => sub-tokyoSkyra05_space-other_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-tokyoSkyra05/anat/{sub-tokyoSkyra05_space-other_T2star_seg-manual.json => sub-tokyoSkyra05_space-other_T2star_label-SC_seg.json} (100%) rename derivatives/labels/sub-tokyoSkyra05/anat/{sub-tokyoSkyra05_space-other_T2star_seg-manual.nii.gz => sub-tokyoSkyra05_space-other_T2star_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-tokyoSkyra05/anat/{sub-tokyoSkyra05_space-other_T2w_seg-manual.json => sub-tokyoSkyra05_space-other_T2w_label-SC_seg.json} (100%) rename derivatives/labels/sub-tokyoSkyra05/anat/{sub-tokyoSkyra05_space-other_T2w_seg-manual.nii.gz => sub-tokyoSkyra05_space-other_T2w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-tokyoSkyra05/anat/{sub-tokyoSkyra05_space-other_T2w_labels-disc-manual.json => sub-tokyoSkyra05_space-other_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-tokyoSkyra05/anat/{sub-tokyoSkyra05_space-other_T2w_labels-disc-manual.nii.gz => sub-tokyoSkyra05_space-other_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-tokyoSkyra05/dwi/{sub-tokyoSkyra05_rec-average_dwi_seg-manual.json => sub-tokyoSkyra05_rec-average_dwi_label-SC_seg.json} (100%) rename derivatives/labels/sub-tokyoSkyra05/dwi/{sub-tokyoSkyra05_rec-average_dwi_seg-manual.nii.gz => sub-tokyoSkyra05_rec-average_dwi_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-tokyoSkyra06/anat/{sub-tokyoSkyra06_flip-1_mt-on_space-other_MTS_seg-manual.json => sub-tokyoSkyra06_flip-1_mt-on_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-tokyoSkyra06/anat/{sub-tokyoSkyra06_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz => sub-tokyoSkyra06_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-tokyoSkyra06/anat/{sub-tokyoSkyra06_flip-2_mt-off_space-other_MTS_seg-manual.json => sub-tokyoSkyra06_flip-2_mt-off_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-tokyoSkyra06/anat/{sub-tokyoSkyra06_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz => sub-tokyoSkyra06_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-tokyoSkyra06/anat/{sub-tokyoSkyra06_space-other_T1w_seg-manual.json => sub-tokyoSkyra06_space-other_T1w_label-SC_seg.json} (100%) rename derivatives/labels/sub-tokyoSkyra06/anat/{sub-tokyoSkyra06_space-other_T1w_seg-manual.nii.gz => sub-tokyoSkyra06_space-other_T1w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-tokyoSkyra06/anat/{sub-tokyoSkyra06_space-other_T1w_labels-disc-manual.json => sub-tokyoSkyra06_space-other_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-tokyoSkyra06/anat/{sub-tokyoSkyra06_space-other_T1w_labels-disc-manual.nii.gz => sub-tokyoSkyra06_space-other_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-tokyoSkyra06/anat/{sub-tokyoSkyra06_space-other_T2star_seg-manual.json => sub-tokyoSkyra06_space-other_T2star_label-SC_seg.json} (100%) rename derivatives/labels/sub-tokyoSkyra06/anat/{sub-tokyoSkyra06_space-other_T2star_seg-manual.nii.gz => sub-tokyoSkyra06_space-other_T2star_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-tokyoSkyra06/anat/{sub-tokyoSkyra06_space-other_T2w_seg-manual.json => sub-tokyoSkyra06_space-other_T2w_label-SC_seg.json} (100%) rename derivatives/labels/sub-tokyoSkyra06/anat/{sub-tokyoSkyra06_space-other_T2w_seg-manual.nii.gz => sub-tokyoSkyra06_space-other_T2w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-tokyoSkyra06/anat/{sub-tokyoSkyra06_space-other_T2w_labels-disc-manual.json => sub-tokyoSkyra06_space-other_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-tokyoSkyra06/anat/{sub-tokyoSkyra06_space-other_T2w_labels-disc-manual.nii.gz => sub-tokyoSkyra06_space-other_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-tokyoSkyra06/dwi/{sub-tokyoSkyra06_rec-average_dwi_seg-manual.json => sub-tokyoSkyra06_rec-average_dwi_label-SC_seg.json} (100%) rename derivatives/labels/sub-tokyoSkyra06/dwi/{sub-tokyoSkyra06_rec-average_dwi_seg-manual.nii.gz => sub-tokyoSkyra06_rec-average_dwi_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-tokyoSkyra07/anat/{sub-tokyoSkyra07_flip-1_mt-on_space-other_MTS_seg-manual.json => sub-tokyoSkyra07_flip-1_mt-on_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-tokyoSkyra07/anat/{sub-tokyoSkyra07_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz => sub-tokyoSkyra07_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-tokyoSkyra07/anat/{sub-tokyoSkyra07_flip-2_mt-off_space-other_MTS_seg-manual.json => sub-tokyoSkyra07_flip-2_mt-off_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-tokyoSkyra07/anat/{sub-tokyoSkyra07_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz => sub-tokyoSkyra07_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-tokyoSkyra07/anat/{sub-tokyoSkyra07_space-other_T1w_seg-manual.json => sub-tokyoSkyra07_space-other_T1w_label-SC_seg.json} (100%) rename derivatives/labels/sub-tokyoSkyra07/anat/{sub-tokyoSkyra07_space-other_T1w_seg-manual.nii.gz => sub-tokyoSkyra07_space-other_T1w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-tokyoSkyra07/anat/{sub-tokyoSkyra07_space-other_T1w_labels-disc-manual.json => sub-tokyoSkyra07_space-other_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-tokyoSkyra07/anat/{sub-tokyoSkyra07_space-other_T1w_labels-disc-manual.nii.gz => sub-tokyoSkyra07_space-other_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-tokyoSkyra07/anat/{sub-tokyoSkyra07_space-other_T2star_seg-manual.json => sub-tokyoSkyra07_space-other_T2star_label-SC_seg.json} (100%) rename derivatives/labels/sub-tokyoSkyra07/anat/{sub-tokyoSkyra07_space-other_T2star_seg-manual.nii.gz => sub-tokyoSkyra07_space-other_T2star_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-tokyoSkyra07/anat/{sub-tokyoSkyra07_space-other_T2w_seg-manual.json => sub-tokyoSkyra07_space-other_T2w_label-SC_seg.json} (100%) rename derivatives/labels/sub-tokyoSkyra07/anat/{sub-tokyoSkyra07_space-other_T2w_seg-manual.nii.gz => sub-tokyoSkyra07_space-other_T2w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-tokyoSkyra07/anat/{sub-tokyoSkyra07_space-other_T2w_labels-disc-manual.json => sub-tokyoSkyra07_space-other_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-tokyoSkyra07/anat/{sub-tokyoSkyra07_space-other_T2w_labels-disc-manual.nii.gz => sub-tokyoSkyra07_space-other_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-tokyoSkyra07/dwi/{sub-tokyoSkyra07_rec-average_dwi_seg-manual.json => sub-tokyoSkyra07_rec-average_dwi_label-SC_seg.json} (100%) rename derivatives/labels/sub-tokyoSkyra07/dwi/{sub-tokyoSkyra07_rec-average_dwi_seg-manual.nii.gz => sub-tokyoSkyra07_rec-average_dwi_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-ubc01/anat/{sub-ubc01_flip-1_mt-on_space-other_MTS_seg-manual.json => sub-ubc01_flip-1_mt-on_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-ubc01/anat/{sub-ubc01_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz => sub-ubc01_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-ubc01/anat/{sub-ubc01_space-other_T1w_seg-manual.json => sub-ubc01_space-other_T1w_label-SC_seg.json} (100%) rename derivatives/labels/sub-ubc01/anat/{sub-ubc01_space-other_T1w_seg-manual.nii.gz => sub-ubc01_space-other_T1w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-ubc01/anat/{sub-ubc01_space-other_T1w_labels-disc-manual.json => sub-ubc01_space-other_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-ubc01/anat/{sub-ubc01_space-other_T1w_labels-disc-manual.nii.gz => sub-ubc01_space-other_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-ubc01/anat/{sub-ubc01_space-other_T2star_seg-manual.json => sub-ubc01_space-other_T2star_label-SC_seg.json} (100%) rename derivatives/labels/sub-ubc01/anat/{sub-ubc01_space-other_T2star_seg-manual.nii.gz => sub-ubc01_space-other_T2star_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-ubc01/anat/{sub-ubc01_space-other_T2w_seg-manual.json => sub-ubc01_space-other_T2w_label-SC_seg.json} (100%) rename derivatives/labels/sub-ubc01/anat/{sub-ubc01_space-other_T2w_seg-manual.nii.gz => sub-ubc01_space-other_T2w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-ubc01/anat/{sub-ubc01_space-other_T2w_labels-disc-manual.json => sub-ubc01_space-other_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-ubc01/anat/{sub-ubc01_space-other_T2w_labels-disc-manual.nii.gz => sub-ubc01_space-other_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-ubc01/dwi/{sub-ubc01_rec-average_dwi_seg-manual.json => sub-ubc01_rec-average_dwi_label-SC_seg.json} (100%) rename derivatives/labels/sub-ubc01/dwi/{sub-ubc01_rec-average_dwi_seg-manual.nii.gz => sub-ubc01_rec-average_dwi_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-ubc02/anat/{sub-ubc02_flip-1_mt-on_space-other_MTS_seg-manual.json => sub-ubc02_flip-1_mt-on_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-ubc02/anat/{sub-ubc02_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz => sub-ubc02_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-ubc02/anat/{sub-ubc02_flip-2_mt-off_space-other_MTS_seg-manual.json => sub-ubc02_flip-2_mt-off_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-ubc02/anat/{sub-ubc02_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz => sub-ubc02_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-ubc02/anat/{sub-ubc02_space-other_T1w_seg-manual.json => sub-ubc02_space-other_T1w_label-SC_seg.json} (100%) rename derivatives/labels/sub-ubc02/anat/{sub-ubc02_space-other_T1w_seg-manual.nii.gz => sub-ubc02_space-other_T1w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-ubc02/anat/{sub-ubc02_space-other_T1w_labels-disc-manual.json => sub-ubc02_space-other_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-ubc02/anat/{sub-ubc02_space-other_T1w_labels-disc-manual.nii.gz => sub-ubc02_space-other_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-ubc02/anat/{sub-ubc02_space-other_T2star_seg-manual.json => sub-ubc02_space-other_T2star_label-SC_seg.json} (100%) rename derivatives/labels/sub-ubc02/anat/{sub-ubc02_space-other_T2star_seg-manual.nii.gz => sub-ubc02_space-other_T2star_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-ubc02/anat/{sub-ubc02_space-other_T2w_seg-manual.json => sub-ubc02_space-other_T2w_label-SC_seg.json} (100%) rename derivatives/labels/sub-ubc02/anat/{sub-ubc02_space-other_T2w_seg-manual.nii.gz => sub-ubc02_space-other_T2w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-ubc02/anat/{sub-ubc02_space-other_T2w_labels-disc-manual.json => sub-ubc02_space-other_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-ubc02/anat/{sub-ubc02_space-other_T2w_labels-disc-manual.nii.gz => sub-ubc02_space-other_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-ubc02/dwi/{sub-ubc02_rec-average_dwi_seg-manual.json => sub-ubc02_rec-average_dwi_label-SC_seg.json} (100%) rename derivatives/labels/sub-ubc02/dwi/{sub-ubc02_rec-average_dwi_seg-manual.nii.gz => sub-ubc02_rec-average_dwi_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-ubc03/anat/{sub-ubc03_flip-1_mt-on_space-other_MTS_seg-manual.json => sub-ubc03_flip-1_mt-on_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-ubc03/anat/{sub-ubc03_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz => sub-ubc03_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-ubc03/anat/{sub-ubc03_flip-2_mt-off_space-other_MTS_seg-manual.json => sub-ubc03_flip-2_mt-off_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-ubc03/anat/{sub-ubc03_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz => sub-ubc03_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-ubc03/anat/{sub-ubc03_space-other_T1w_seg-manual.json => sub-ubc03_space-other_T1w_label-SC_seg.json} (100%) rename derivatives/labels/sub-ubc03/anat/{sub-ubc03_space-other_T1w_seg-manual.nii.gz => sub-ubc03_space-other_T1w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-ubc03/anat/{sub-ubc03_space-other_T1w_labels-disc-manual.json => sub-ubc03_space-other_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-ubc03/anat/{sub-ubc03_space-other_T1w_labels-disc-manual.nii.gz => sub-ubc03_space-other_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-ubc03/anat/{sub-ubc03_space-other_T2star_seg-manual.json => sub-ubc03_space-other_T2star_label-SC_seg.json} (100%) rename derivatives/labels/sub-ubc03/anat/{sub-ubc03_space-other_T2star_seg-manual.nii.gz => sub-ubc03_space-other_T2star_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-ubc03/anat/{sub-ubc03_space-other_T2w_seg-manual.json => sub-ubc03_space-other_T2w_label-SC_seg.json} (100%) rename derivatives/labels/sub-ubc03/anat/{sub-ubc03_space-other_T2w_seg-manual.nii.gz => sub-ubc03_space-other_T2w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-ubc03/anat/{sub-ubc03_space-other_T2w_labels-disc-manual.json => sub-ubc03_space-other_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-ubc03/anat/{sub-ubc03_space-other_T2w_labels-disc-manual.nii.gz => sub-ubc03_space-other_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-ubc03/dwi/{sub-ubc03_rec-average_dwi_seg-manual.json => sub-ubc03_rec-average_dwi_label-SC_seg.json} (100%) rename derivatives/labels/sub-ubc03/dwi/{sub-ubc03_rec-average_dwi_seg-manual.nii.gz => sub-ubc03_rec-average_dwi_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-ubc04/anat/{sub-ubc04_flip-1_mt-on_space-other_MTS_seg-manual.json => sub-ubc04_flip-1_mt-on_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-ubc04/anat/{sub-ubc04_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz => sub-ubc04_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-ubc04/anat/{sub-ubc04_flip-2_mt-off_space-other_MTS_seg-manual.json => sub-ubc04_flip-2_mt-off_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-ubc04/anat/{sub-ubc04_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz => sub-ubc04_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-ubc04/anat/{sub-ubc04_space-other_T1w_seg-manual.json => sub-ubc04_space-other_T1w_label-SC_seg.json} (100%) rename derivatives/labels/sub-ubc04/anat/{sub-ubc04_space-other_T1w_seg-manual.nii.gz => sub-ubc04_space-other_T1w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-ubc04/anat/{sub-ubc04_space-other_T1w_labels-disc-manual.json => sub-ubc04_space-other_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-ubc04/anat/{sub-ubc04_space-other_T1w_labels-disc-manual.nii.gz => sub-ubc04_space-other_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-ubc04/anat/{sub-ubc04_space-other_T2star_seg-manual.json => sub-ubc04_space-other_T2star_label-SC_seg.json} (100%) rename derivatives/labels/sub-ubc04/anat/{sub-ubc04_space-other_T2star_seg-manual.nii.gz => sub-ubc04_space-other_T2star_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-ubc04/anat/{sub-ubc04_space-other_T2w_seg-manual.json => sub-ubc04_space-other_T2w_label-SC_seg.json} (100%) rename derivatives/labels/sub-ubc04/anat/{sub-ubc04_space-other_T2w_seg-manual.nii.gz => sub-ubc04_space-other_T2w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-ubc04/anat/{sub-ubc04_space-other_T2w_labels-disc-manual.json => sub-ubc04_space-other_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-ubc04/anat/{sub-ubc04_space-other_T2w_labels-disc-manual.nii.gz => sub-ubc04_space-other_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-ubc04/dwi/{sub-ubc04_rec-average_dwi_seg-manual.json => sub-ubc04_rec-average_dwi_label-SC_seg.json} (100%) rename derivatives/labels/sub-ubc04/dwi/{sub-ubc04_rec-average_dwi_seg-manual.nii.gz => sub-ubc04_rec-average_dwi_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-ubc05/anat/{sub-ubc05_flip-1_mt-on_space-other_MTS_seg-manual.json => sub-ubc05_flip-1_mt-on_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-ubc05/anat/{sub-ubc05_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz => sub-ubc05_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-ubc05/anat/{sub-ubc05_flip-2_mt-off_space-other_MTS_seg-manual.json => sub-ubc05_flip-2_mt-off_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-ubc05/anat/{sub-ubc05_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz => sub-ubc05_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-ubc05/anat/{sub-ubc05_space-other_T1w_seg-manual.json => sub-ubc05_space-other_T1w_label-SC_seg.json} (100%) rename derivatives/labels/sub-ubc05/anat/{sub-ubc05_space-other_T1w_seg-manual.nii.gz => sub-ubc05_space-other_T1w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-ubc05/anat/{sub-ubc05_space-other_T1w_labels-disc-manual.json => sub-ubc05_space-other_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-ubc05/anat/{sub-ubc05_space-other_T1w_labels-disc-manual.nii.gz => sub-ubc05_space-other_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-ubc05/anat/{sub-ubc05_space-other_T2star_seg-manual.json => sub-ubc05_space-other_T2star_label-SC_seg.json} (100%) rename derivatives/labels/sub-ubc05/anat/{sub-ubc05_space-other_T2star_seg-manual.nii.gz => sub-ubc05_space-other_T2star_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-ubc05/anat/{sub-ubc05_space-other_T2w_seg-manual.json => sub-ubc05_space-other_T2w_label-SC_seg.json} (100%) rename derivatives/labels/sub-ubc05/anat/{sub-ubc05_space-other_T2w_seg-manual.nii.gz => sub-ubc05_space-other_T2w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-ubc05/anat/{sub-ubc05_space-other_T2w_labels-disc-manual.json => sub-ubc05_space-other_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-ubc05/anat/{sub-ubc05_space-other_T2w_labels-disc-manual.nii.gz => sub-ubc05_space-other_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-ubc05/dwi/{sub-ubc05_rec-average_dwi_seg-manual.json => sub-ubc05_rec-average_dwi_label-SC_seg.json} (100%) rename derivatives/labels/sub-ubc05/dwi/{sub-ubc05_rec-average_dwi_seg-manual.nii.gz => sub-ubc05_rec-average_dwi_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-ubc06/anat/{sub-ubc06_flip-1_mt-on_space-other_MTS_seg-manual.json => sub-ubc06_flip-1_mt-on_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-ubc06/anat/{sub-ubc06_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz => sub-ubc06_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-ubc06/anat/{sub-ubc06_flip-2_mt-off_space-other_MTS_seg-manual.json => sub-ubc06_flip-2_mt-off_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-ubc06/anat/{sub-ubc06_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz => sub-ubc06_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-ubc06/anat/{sub-ubc06_space-other_T1w_seg-manual.json => sub-ubc06_space-other_T1w_label-SC_seg.json} (100%) rename derivatives/labels/sub-ubc06/anat/{sub-ubc06_space-other_T1w_seg-manual.nii.gz => sub-ubc06_space-other_T1w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-ubc06/anat/{sub-ubc06_space-other_T1w_labels-disc-manual.json => sub-ubc06_space-other_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-ubc06/anat/{sub-ubc06_space-other_T1w_labels-disc-manual.nii.gz => sub-ubc06_space-other_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-ubc06/anat/{sub-ubc06_space-other_T2star_seg-manual.json => sub-ubc06_space-other_T2star_label-SC_seg.json} (100%) rename derivatives/labels/sub-ubc06/anat/{sub-ubc06_space-other_T2star_seg-manual.nii.gz => sub-ubc06_space-other_T2star_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-ubc06/anat/{sub-ubc06_space-other_T2w_seg-manual.json => sub-ubc06_space-other_T2w_label-SC_seg.json} (100%) rename derivatives/labels/sub-ubc06/anat/{sub-ubc06_space-other_T2w_seg-manual.nii.gz => sub-ubc06_space-other_T2w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-ubc06/anat/{sub-ubc06_space-other_T2w_labels-disc-manual.json => sub-ubc06_space-other_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-ubc06/anat/{sub-ubc06_space-other_T2w_labels-disc-manual.nii.gz => sub-ubc06_space-other_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-ubc06/dwi/{sub-ubc06_rec-average_dwi_seg-manual.json => sub-ubc06_rec-average_dwi_label-SC_seg.json} (100%) rename derivatives/labels/sub-ubc06/dwi/{sub-ubc06_rec-average_dwi_seg-manual.nii.gz => sub-ubc06_rec-average_dwi_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-ucdavis01/anat/{sub-ucdavis01_flip-1_mt-on_space-other_MTS_seg-manual.json => sub-ucdavis01_flip-1_mt-on_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-ucdavis01/anat/{sub-ucdavis01_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz => sub-ucdavis01_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-ucdavis01/anat/{sub-ucdavis01_flip-2_mt-off_space-other_MTS_seg-manual.json => sub-ucdavis01_flip-2_mt-off_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-ucdavis01/anat/{sub-ucdavis01_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz => sub-ucdavis01_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-ucdavis01/anat/{sub-ucdavis01_space-other_T1w_seg-manual.json => sub-ucdavis01_space-other_T1w_label-SC_seg.json} (100%) rename derivatives/labels/sub-ucdavis01/anat/{sub-ucdavis01_space-other_T1w_seg-manual.nii.gz => sub-ucdavis01_space-other_T1w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-ucdavis01/anat/{sub-ucdavis01_space-other_T1w_labels-disc-manual.json => sub-ucdavis01_space-other_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-ucdavis01/anat/{sub-ucdavis01_space-other_T1w_labels-disc-manual.nii.gz => sub-ucdavis01_space-other_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-ucdavis01/anat/{sub-ucdavis01_space-other_T2star_seg-manual.json => sub-ucdavis01_space-other_T2star_label-SC_seg.json} (100%) rename derivatives/labels/sub-ucdavis01/anat/{sub-ucdavis01_space-other_T2star_seg-manual.nii.gz => sub-ucdavis01_space-other_T2star_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-ucdavis01/anat/{sub-ucdavis01_space-other_T2w_seg-manual.json => sub-ucdavis01_space-other_T2w_label-SC_seg.json} (100%) rename derivatives/labels/sub-ucdavis01/anat/{sub-ucdavis01_space-other_T2w_seg-manual.nii.gz => sub-ucdavis01_space-other_T2w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-ucdavis01/anat/{sub-ucdavis01_space-other_T2w_labels-disc-manual.json => sub-ucdavis01_space-other_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-ucdavis01/anat/{sub-ucdavis01_space-other_T2w_labels-disc-manual.nii.gz => sub-ucdavis01_space-other_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-ucdavis02/anat/{sub-ucdavis02_flip-1_mt-on_space-other_MTS_seg-manual.json => sub-ucdavis02_flip-1_mt-on_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-ucdavis02/anat/{sub-ucdavis02_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz => sub-ucdavis02_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-ucdavis02/anat/{sub-ucdavis02_flip-2_mt-off_space-other_MTS_seg-manual.json => sub-ucdavis02_flip-2_mt-off_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-ucdavis02/anat/{sub-ucdavis02_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz => sub-ucdavis02_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-ucdavis02/anat/{sub-ucdavis02_space-other_T1w_seg-manual.json => sub-ucdavis02_space-other_T1w_label-SC_seg.json} (100%) rename derivatives/labels/sub-ucdavis02/anat/{sub-ucdavis02_space-other_T1w_seg-manual.nii.gz => sub-ucdavis02_space-other_T1w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-ucdavis02/anat/{sub-ucdavis02_space-other_T1w_labels-disc-manual.json => sub-ucdavis02_space-other_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-ucdavis02/anat/{sub-ucdavis02_space-other_T1w_labels-disc-manual.nii.gz => sub-ucdavis02_space-other_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-ucdavis02/anat/{sub-ucdavis02_space-other_T2star_seg-manual.json => sub-ucdavis02_space-other_T2star_label-SC_seg.json} (100%) rename derivatives/labels/sub-ucdavis02/anat/{sub-ucdavis02_space-other_T2star_seg-manual.nii.gz => sub-ucdavis02_space-other_T2star_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-ucdavis02/anat/{sub-ucdavis02_space-other_T2w_seg-manual.json => sub-ucdavis02_space-other_T2w_label-SC_seg.json} (100%) rename derivatives/labels/sub-ucdavis02/anat/{sub-ucdavis02_space-other_T2w_seg-manual.nii.gz => sub-ucdavis02_space-other_T2w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-ucdavis02/anat/{sub-ucdavis02_space-other_T2w_labels-disc-manual.json => sub-ucdavis02_space-other_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-ucdavis02/anat/{sub-ucdavis02_space-other_T2w_labels-disc-manual.nii.gz => sub-ucdavis02_space-other_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-ucdavis03/anat/{sub-ucdavis03_flip-1_mt-on_space-other_MTS_seg-manual.json => sub-ucdavis03_flip-1_mt-on_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-ucdavis03/anat/{sub-ucdavis03_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz => sub-ucdavis03_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-ucdavis03/anat/{sub-ucdavis03_space-other_T1w_seg-manual.json => sub-ucdavis03_space-other_T1w_label-SC_seg.json} (100%) rename derivatives/labels/sub-ucdavis03/anat/{sub-ucdavis03_space-other_T1w_seg-manual.nii.gz => sub-ucdavis03_space-other_T1w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-ucdavis03/anat/{sub-ucdavis03_space-other_T1w_labels-disc-manual.json => sub-ucdavis03_space-other_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-ucdavis03/anat/{sub-ucdavis03_space-other_T1w_labels-disc-manual.nii.gz => sub-ucdavis03_space-other_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-ucdavis03/anat/{sub-ucdavis03_space-other_T2star_seg-manual.json => sub-ucdavis03_space-other_T2star_label-SC_seg.json} (100%) rename derivatives/labels/sub-ucdavis03/anat/{sub-ucdavis03_space-other_T2star_seg-manual.nii.gz => sub-ucdavis03_space-other_T2star_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-ucdavis03/anat/{sub-ucdavis03_space-other_T2w_seg-manual.json => sub-ucdavis03_space-other_T2w_label-SC_seg.json} (100%) rename derivatives/labels/sub-ucdavis03/anat/{sub-ucdavis03_space-other_T2w_seg-manual.nii.gz => sub-ucdavis03_space-other_T2w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-ucdavis03/anat/{sub-ucdavis03_space-other_T2w_labels-disc-manual.json => sub-ucdavis03_space-other_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-ucdavis03/anat/{sub-ucdavis03_space-other_T2w_labels-disc-manual.nii.gz => sub-ucdavis03_space-other_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-ucdavis03/dwi/{sub-ucdavis03_rec-average_dwi_seg-manual.json => sub-ucdavis03_rec-average_dwi_label-SC_seg.json} (100%) rename derivatives/labels/sub-ucdavis03/dwi/{sub-ucdavis03_rec-average_dwi_seg-manual.nii.gz => sub-ucdavis03_rec-average_dwi_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-ucdavis04/anat/{sub-ucdavis04_flip-1_mt-on_space-other_MTS_seg-manual.json => sub-ucdavis04_flip-1_mt-on_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-ucdavis04/anat/{sub-ucdavis04_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz => sub-ucdavis04_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-ucdavis04/anat/{sub-ucdavis04_flip-2_mt-off_space-other_MTS_seg-manual.json => sub-ucdavis04_flip-2_mt-off_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-ucdavis04/anat/{sub-ucdavis04_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz => sub-ucdavis04_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-ucdavis04/anat/{sub-ucdavis04_space-other_T1w_seg-manual.json => sub-ucdavis04_space-other_T1w_label-SC_seg.json} (100%) rename derivatives/labels/sub-ucdavis04/anat/{sub-ucdavis04_space-other_T1w_seg-manual.nii.gz => sub-ucdavis04_space-other_T1w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-ucdavis04/anat/{sub-ucdavis04_space-other_T1w_labels-disc-manual.json => sub-ucdavis04_space-other_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-ucdavis04/anat/{sub-ucdavis04_space-other_T1w_labels-disc-manual.nii.gz => sub-ucdavis04_space-other_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-ucdavis04/anat/{sub-ucdavis04_space-other_T2star_seg-manual.json => sub-ucdavis04_space-other_T2star_label-SC_seg.json} (100%) rename derivatives/labels/sub-ucdavis04/anat/{sub-ucdavis04_space-other_T2star_seg-manual.nii.gz => sub-ucdavis04_space-other_T2star_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-ucdavis04/anat/{sub-ucdavis04_space-other_T2w_seg-manual.json => sub-ucdavis04_space-other_T2w_label-SC_seg.json} (100%) rename derivatives/labels/sub-ucdavis04/anat/{sub-ucdavis04_space-other_T2w_seg-manual.nii.gz => sub-ucdavis04_space-other_T2w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-ucdavis04/anat/{sub-ucdavis04_space-other_T2w_labels-disc-manual.json => sub-ucdavis04_space-other_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-ucdavis04/anat/{sub-ucdavis04_space-other_T2w_labels-disc-manual.nii.gz => sub-ucdavis04_space-other_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-ucdavis05/anat/{sub-ucdavis05_flip-1_mt-on_space-other_MTS_seg-manual.json => sub-ucdavis05_flip-1_mt-on_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-ucdavis05/anat/{sub-ucdavis05_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz => sub-ucdavis05_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-ucdavis05/anat/{sub-ucdavis05_space-other_T1w_seg-manual.json => sub-ucdavis05_space-other_T1w_label-SC_seg.json} (100%) rename derivatives/labels/sub-ucdavis05/anat/{sub-ucdavis05_space-other_T1w_seg-manual.nii.gz => sub-ucdavis05_space-other_T1w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-ucdavis05/anat/{sub-ucdavis05_space-other_T1w_labels-disc-manual.json => sub-ucdavis05_space-other_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-ucdavis05/anat/{sub-ucdavis05_space-other_T1w_labels-disc-manual.nii.gz => sub-ucdavis05_space-other_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-ucdavis05/anat/{sub-ucdavis05_space-other_T2star_seg-manual.json => sub-ucdavis05_space-other_T2star_label-SC_seg.json} (100%) rename derivatives/labels/sub-ucdavis05/anat/{sub-ucdavis05_space-other_T2star_seg-manual.nii.gz => sub-ucdavis05_space-other_T2star_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-ucdavis05/anat/{sub-ucdavis05_space-other_T2w_seg-manual.json => sub-ucdavis05_space-other_T2w_label-SC_seg.json} (100%) rename derivatives/labels/sub-ucdavis05/anat/{sub-ucdavis05_space-other_T2w_seg-manual.nii.gz => sub-ucdavis05_space-other_T2w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-ucdavis05/anat/{sub-ucdavis05_space-other_T2w_labels-disc-manual.json => sub-ucdavis05_space-other_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-ucdavis05/anat/{sub-ucdavis05_space-other_T2w_labels-disc-manual.nii.gz => sub-ucdavis05_space-other_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-ucdavis05/dwi/{sub-ucdavis05_rec-average_dwi_seg-manual.json => sub-ucdavis05_rec-average_dwi_label-SC_seg.json} (100%) rename derivatives/labels/sub-ucdavis05/dwi/{sub-ucdavis05_rec-average_dwi_seg-manual.nii.gz => sub-ucdavis05_rec-average_dwi_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-ucdavis06/anat/{sub-ucdavis06_flip-1_mt-on_space-other_MTS_seg-manual.json => sub-ucdavis06_flip-1_mt-on_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-ucdavis06/anat/{sub-ucdavis06_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz => sub-ucdavis06_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-ucdavis06/anat/{sub-ucdavis06_space-other_T1w_seg-manual.json => sub-ucdavis06_space-other_T1w_label-SC_seg.json} (100%) rename derivatives/labels/sub-ucdavis06/anat/{sub-ucdavis06_space-other_T1w_seg-manual.nii.gz => sub-ucdavis06_space-other_T1w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-ucdavis06/anat/{sub-ucdavis06_space-other_T1w_labels-disc-manual.json => sub-ucdavis06_space-other_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-ucdavis06/anat/{sub-ucdavis06_space-other_T1w_labels-disc-manual.nii.gz => sub-ucdavis06_space-other_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-ucdavis06/anat/{sub-ucdavis06_space-other_T2star_seg-manual.json => sub-ucdavis06_space-other_T2star_label-SC_seg.json} (100%) rename derivatives/labels/sub-ucdavis06/anat/{sub-ucdavis06_space-other_T2star_seg-manual.nii.gz => sub-ucdavis06_space-other_T2star_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-ucdavis06/anat/{sub-ucdavis06_space-other_T2w_seg-manual.json => sub-ucdavis06_space-other_T2w_label-SC_seg.json} (100%) rename derivatives/labels/sub-ucdavis06/anat/{sub-ucdavis06_space-other_T2w_seg-manual.nii.gz => sub-ucdavis06_space-other_T2w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-ucdavis06/anat/{sub-ucdavis06_space-other_T2w_labels-disc-manual.json => sub-ucdavis06_space-other_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-ucdavis06/anat/{sub-ucdavis06_space-other_T2w_labels-disc-manual.nii.gz => sub-ucdavis06_space-other_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-ucdavis07/anat/{sub-ucdavis07_flip-1_mt-on_space-other_MTS_seg-manual.json => sub-ucdavis07_flip-1_mt-on_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-ucdavis07/anat/{sub-ucdavis07_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz => sub-ucdavis07_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-ucdavis07/anat/{sub-ucdavis07_space-other_T1w_seg-manual.json => sub-ucdavis07_space-other_T1w_label-SC_seg.json} (100%) rename derivatives/labels/sub-ucdavis07/anat/{sub-ucdavis07_space-other_T1w_seg-manual.nii.gz => sub-ucdavis07_space-other_T1w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-ucdavis07/anat/{sub-ucdavis07_space-other_T1w_labels-disc-manual.json => sub-ucdavis07_space-other_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-ucdavis07/anat/{sub-ucdavis07_space-other_T1w_labels-disc-manual.nii.gz => sub-ucdavis07_space-other_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-ucdavis07/anat/{sub-ucdavis07_space-other_T2star_seg-manual.json => sub-ucdavis07_space-other_T2star_label-SC_seg.json} (100%) rename derivatives/labels/sub-ucdavis07/anat/{sub-ucdavis07_space-other_T2star_seg-manual.nii.gz => sub-ucdavis07_space-other_T2star_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-ucdavis07/anat/{sub-ucdavis07_space-other_T2w_seg-manual.json => sub-ucdavis07_space-other_T2w_label-SC_seg.json} (100%) rename derivatives/labels/sub-ucdavis07/anat/{sub-ucdavis07_space-other_T2w_seg-manual.nii.gz => sub-ucdavis07_space-other_T2w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-ucdavis07/anat/{sub-ucdavis07_space-other_T2w_labels-disc-manual.json => sub-ucdavis07_space-other_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-ucdavis07/anat/{sub-ucdavis07_space-other_T2w_labels-disc-manual.nii.gz => sub-ucdavis07_space-other_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-ucl01/anat/{sub-ucl01_flip-1_mt-on_space-other_MTS_seg-manual.json => sub-ucl01_flip-1_mt-on_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-ucl01/anat/{sub-ucl01_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz => sub-ucl01_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-ucl01/anat/{sub-ucl01_flip-2_mt-off_space-other_MTS_seg-manual.json => sub-ucl01_flip-2_mt-off_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-ucl01/anat/{sub-ucl01_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz => sub-ucl01_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-ucl01/anat/{sub-ucl01_space-other_T1w_seg-manual.json => sub-ucl01_space-other_T1w_label-SC_seg.json} (100%) rename derivatives/labels/sub-ucl01/anat/{sub-ucl01_space-other_T1w_seg-manual.nii.gz => sub-ucl01_space-other_T1w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-ucl01/anat/{sub-ucl01_space-other_T1w_labels-disc-manual.json => sub-ucl01_space-other_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-ucl01/anat/{sub-ucl01_space-other_T1w_labels-disc-manual.nii.gz => sub-ucl01_space-other_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-ucl01/anat/{sub-ucl01_space-other_T2star_seg-manual.json => sub-ucl01_space-other_T2star_label-SC_seg.json} (100%) rename derivatives/labels/sub-ucl01/anat/{sub-ucl01_space-other_T2star_seg-manual.nii.gz => sub-ucl01_space-other_T2star_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-ucl01/anat/{sub-ucl01_space-other_T2w_seg-manual.json => sub-ucl01_space-other_T2w_label-SC_seg.json} (100%) rename derivatives/labels/sub-ucl01/anat/{sub-ucl01_space-other_T2w_seg-manual.nii.gz => sub-ucl01_space-other_T2w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-ucl01/anat/{sub-ucl01_space-other_T2w_labels-disc-manual.json => sub-ucl01_space-other_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-ucl01/anat/{sub-ucl01_space-other_T2w_labels-disc-manual.nii.gz => sub-ucl01_space-other_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-ucl01/dwi/{sub-ucl01_rec-average_dwi_seg-manual.json => sub-ucl01_rec-average_dwi_label-SC_seg.json} (100%) rename derivatives/labels/sub-ucl01/dwi/{sub-ucl01_rec-average_dwi_seg-manual.nii.gz => sub-ucl01_rec-average_dwi_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-ucl02/anat/{sub-ucl02_flip-1_mt-on_space-other_MTS_seg-manual.json => sub-ucl02_flip-1_mt-on_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-ucl02/anat/{sub-ucl02_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz => sub-ucl02_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-ucl02/anat/{sub-ucl02_flip-2_mt-off_space-other_MTS_seg-manual.json => sub-ucl02_flip-2_mt-off_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-ucl02/anat/{sub-ucl02_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz => sub-ucl02_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-ucl02/anat/{sub-ucl02_space-other_T1w_seg-manual.json => sub-ucl02_space-other_T1w_label-SC_seg.json} (100%) rename derivatives/labels/sub-ucl02/anat/{sub-ucl02_space-other_T1w_seg-manual.nii.gz => sub-ucl02_space-other_T1w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-ucl02/anat/{sub-ucl02_space-other_T1w_labels-disc-manual.json => sub-ucl02_space-other_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-ucl02/anat/{sub-ucl02_space-other_T1w_labels-disc-manual.nii.gz => sub-ucl02_space-other_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-ucl02/anat/{sub-ucl02_space-other_T2star_seg-manual.json => sub-ucl02_space-other_T2star_label-SC_seg.json} (100%) rename derivatives/labels/sub-ucl02/anat/{sub-ucl02_space-other_T2star_seg-manual.nii.gz => sub-ucl02_space-other_T2star_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-ucl02/anat/{sub-ucl02_space-other_T2w_seg-manual.json => sub-ucl02_space-other_T2w_label-SC_seg.json} (100%) rename derivatives/labels/sub-ucl02/anat/{sub-ucl02_space-other_T2w_seg-manual.nii.gz => sub-ucl02_space-other_T2w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-ucl02/anat/{sub-ucl02_space-other_T2w_labels-disc-manual.json => sub-ucl02_space-other_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-ucl02/anat/{sub-ucl02_space-other_T2w_labels-disc-manual.nii.gz => sub-ucl02_space-other_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-ucl02/dwi/{sub-ucl02_rec-average_dwi_seg-manual.json => sub-ucl02_rec-average_dwi_label-SC_seg.json} (100%) rename derivatives/labels/sub-ucl02/dwi/{sub-ucl02_rec-average_dwi_seg-manual.nii.gz => sub-ucl02_rec-average_dwi_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-ucl03/anat/{sub-ucl03_flip-1_mt-on_space-other_MTS_seg-manual.json => sub-ucl03_flip-1_mt-on_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-ucl03/anat/{sub-ucl03_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz => sub-ucl03_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-ucl03/anat/{sub-ucl03_flip-2_mt-off_space-other_MTS_seg-manual.json => sub-ucl03_flip-2_mt-off_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-ucl03/anat/{sub-ucl03_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz => sub-ucl03_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-ucl03/anat/{sub-ucl03_space-other_T1w_seg-manual.json => sub-ucl03_space-other_T1w_label-SC_seg.json} (100%) rename derivatives/labels/sub-ucl03/anat/{sub-ucl03_space-other_T1w_seg-manual.nii.gz => sub-ucl03_space-other_T1w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-ucl03/anat/{sub-ucl03_space-other_T1w_labels-disc-manual.json => sub-ucl03_space-other_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-ucl03/anat/{sub-ucl03_space-other_T1w_labels-disc-manual.nii.gz => sub-ucl03_space-other_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-ucl03/anat/{sub-ucl03_space-other_T2star_seg-manual.json => sub-ucl03_space-other_T2star_label-SC_seg.json} (100%) rename derivatives/labels/sub-ucl03/anat/{sub-ucl03_space-other_T2star_seg-manual.nii.gz => sub-ucl03_space-other_T2star_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-ucl03/anat/{sub-ucl03_space-other_T2w_seg-manual.json => sub-ucl03_space-other_T2w_label-SC_seg.json} (100%) rename derivatives/labels/sub-ucl03/anat/{sub-ucl03_space-other_T2w_seg-manual.nii.gz => sub-ucl03_space-other_T2w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-ucl03/anat/{sub-ucl03_space-other_T2w_labels-disc-manual.json => sub-ucl03_space-other_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-ucl03/anat/{sub-ucl03_space-other_T2w_labels-disc-manual.nii.gz => sub-ucl03_space-other_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-ucl03/dwi/{sub-ucl03_rec-average_dwi_seg-manual.json => sub-ucl03_rec-average_dwi_label-SC_seg.json} (100%) rename derivatives/labels/sub-ucl03/dwi/{sub-ucl03_rec-average_dwi_seg-manual.nii.gz => sub-ucl03_rec-average_dwi_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-ucl04/anat/{sub-ucl04_flip-1_mt-on_space-other_MTS_seg-manual.json => sub-ucl04_flip-1_mt-on_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-ucl04/anat/{sub-ucl04_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz => sub-ucl04_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-ucl04/anat/{sub-ucl04_flip-2_mt-off_space-other_MTS_seg-manual.json => sub-ucl04_flip-2_mt-off_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-ucl04/anat/{sub-ucl04_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz => sub-ucl04_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-ucl04/anat/{sub-ucl04_space-other_T1w_seg-manual.json => sub-ucl04_space-other_T1w_label-SC_seg.json} (100%) rename derivatives/labels/sub-ucl04/anat/{sub-ucl04_space-other_T1w_seg-manual.nii.gz => sub-ucl04_space-other_T1w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-ucl04/anat/{sub-ucl04_space-other_T1w_labels-disc-manual.json => sub-ucl04_space-other_T1w_label-discs_dlabel.json} 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sub-ucl04_space-other_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-ucl04/dwi/{sub-ucl04_rec-average_dwi_seg-manual.json => sub-ucl04_rec-average_dwi_label-SC_seg.json} (100%) rename derivatives/labels/sub-ucl04/dwi/{sub-ucl04_rec-average_dwi_seg-manual.nii.gz => sub-ucl04_rec-average_dwi_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-ucl05/anat/{sub-ucl05_flip-1_mt-on_space-other_MTS_seg-manual.json => sub-ucl05_flip-1_mt-on_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-ucl05/anat/{sub-ucl05_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz => sub-ucl05_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-ucl05/anat/{sub-ucl05_flip-2_mt-off_space-other_MTS_seg-manual.json => sub-ucl05_flip-2_mt-off_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-ucl05/anat/{sub-ucl05_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz => sub-ucl05_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-ucl05/anat/{sub-ucl05_space-other_T1w_seg-manual.json => sub-ucl05_space-other_T1w_label-SC_seg.json} (100%) rename derivatives/labels/sub-ucl05/anat/{sub-ucl05_space-other_T1w_seg-manual.nii.gz => sub-ucl05_space-other_T1w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-ucl05/anat/{sub-ucl05_space-other_T1w_labels-disc-manual.json => sub-ucl05_space-other_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-ucl05/anat/{sub-ucl05_space-other_T1w_labels-disc-manual.nii.gz => sub-ucl05_space-other_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-ucl05/anat/{sub-ucl05_space-other_T2star_seg-manual.json => sub-ucl05_space-other_T2star_label-SC_seg.json} (100%) rename derivatives/labels/sub-ucl05/anat/{sub-ucl05_space-other_T2star_seg-manual.nii.gz => sub-ucl05_space-other_T2star_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-ucl05/anat/{sub-ucl05_space-other_T2w_seg-manual.json => sub-ucl05_space-other_T2w_label-SC_seg.json} (100%) rename derivatives/labels/sub-ucl05/anat/{sub-ucl05_space-other_T2w_seg-manual.nii.gz => sub-ucl05_space-other_T2w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-ucl05/anat/{sub-ucl05_space-other_T2w_labels-disc-manual.json => sub-ucl05_space-other_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-ucl05/anat/{sub-ucl05_space-other_T2w_labels-disc-manual.nii.gz => sub-ucl05_space-other_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-ucl05/dwi/{sub-ucl05_rec-average_dwi_seg-manual.json => sub-ucl05_rec-average_dwi_label-SC_seg.json} (100%) rename derivatives/labels/sub-ucl05/dwi/{sub-ucl05_rec-average_dwi_seg-manual.nii.gz => sub-ucl05_rec-average_dwi_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-ucl06/anat/{sub-ucl06_flip-1_mt-on_space-other_MTS_seg-manual.json => sub-ucl06_flip-1_mt-on_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-ucl06/anat/{sub-ucl06_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz => sub-ucl06_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-ucl06/anat/{sub-ucl06_flip-2_mt-off_space-other_MTS_seg-manual.json => sub-ucl06_flip-2_mt-off_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-ucl06/anat/{sub-ucl06_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz => sub-ucl06_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-ucl06/anat/{sub-ucl06_space-other_T1w_seg-manual.json => sub-ucl06_space-other_T1w_label-SC_seg.json} (100%) rename derivatives/labels/sub-ucl06/anat/{sub-ucl06_space-other_T1w_seg-manual.nii.gz => sub-ucl06_space-other_T1w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-ucl06/anat/{sub-ucl06_space-other_T1w_labels-disc-manual.json => sub-ucl06_space-other_T1w_label-discs_dlabel.json} 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sub-ucl06_space-other_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-ucl06/dwi/{sub-ucl06_rec-average_dwi_seg-manual.json => sub-ucl06_rec-average_dwi_label-SC_seg.json} (100%) rename derivatives/labels/sub-ucl06/dwi/{sub-ucl06_rec-average_dwi_seg-manual.nii.gz => sub-ucl06_rec-average_dwi_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-unf01/anat/{sub-unf01_flip-1_mt-on_space-other_MTS_seg-manual.json => sub-unf01_flip-1_mt-on_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-unf01/anat/{sub-unf01_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz => sub-unf01_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-unf01/anat/{sub-unf01_flip-2_mt-off_space-other_MTS_seg-manual.json => sub-unf01_flip-2_mt-off_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-unf01/anat/{sub-unf01_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz => sub-unf01_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-unf01/anat/{sub-unf01_space-other_T1w_seg-manual.json => sub-unf01_space-other_T1w_label-SC_seg.json} (100%) rename derivatives/labels/sub-unf01/anat/{sub-unf01_space-other_T1w_seg-manual.nii.gz => sub-unf01_space-other_T1w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-unf01/anat/{sub-unf01_space-other_T1w_labels-disc-manual.json => sub-unf01_space-other_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-unf01/anat/{sub-unf01_space-other_T1w_labels-disc-manual.nii.gz => sub-unf01_space-other_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-unf01/anat/{sub-unf01_space-other_T2star_seg-manual.json => sub-unf01_space-other_T2star_label-SC_seg.json} (100%) rename derivatives/labels/sub-unf01/anat/{sub-unf01_space-other_T2star_seg-manual.nii.gz => sub-unf01_space-other_T2star_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-unf01/anat/{sub-unf01_space-other_T2w_seg-manual.json => sub-unf01_space-other_T2w_label-SC_seg.json} (100%) rename derivatives/labels/sub-unf01/anat/{sub-unf01_space-other_T2w_seg-manual.nii.gz => sub-unf01_space-other_T2w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-unf01/anat/{sub-unf01_space-other_T2w_labels-disc-manual.json => sub-unf01_space-other_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-unf01/anat/{sub-unf01_space-other_T2w_labels-disc-manual.nii.gz => sub-unf01_space-other_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-unf01/dwi/{sub-unf01_rec-average_dwi_seg-manual.json => sub-unf01_rec-average_dwi_label-SC_seg.json} (100%) rename derivatives/labels/sub-unf01/dwi/{sub-unf01_rec-average_dwi_seg-manual.nii.gz => sub-unf01_rec-average_dwi_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-unf02/anat/{sub-unf02_flip-1_mt-on_space-other_MTS_seg-manual.json => sub-unf02_flip-1_mt-on_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-unf02/anat/{sub-unf02_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz => sub-unf02_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-unf02/anat/{sub-unf02_flip-2_mt-off_space-other_MTS_seg-manual.json => sub-unf02_flip-2_mt-off_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-unf02/anat/{sub-unf02_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz => sub-unf02_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-unf02/anat/{sub-unf02_space-other_T1w_seg-manual.json => sub-unf02_space-other_T1w_label-SC_seg.json} (100%) rename derivatives/labels/sub-unf02/anat/{sub-unf02_space-other_T1w_seg-manual.nii.gz => sub-unf02_space-other_T1w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-unf02/anat/{sub-unf02_space-other_T1w_labels-disc-manual.json => sub-unf02_space-other_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-unf02/anat/{sub-unf02_space-other_T1w_labels-disc-manual.nii.gz => sub-unf02_space-other_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-unf02/anat/{sub-unf02_space-other_T2star_seg-manual.json => sub-unf02_space-other_T2star_label-SC_seg.json} (100%) rename derivatives/labels/sub-unf02/anat/{sub-unf02_space-other_T2star_seg-manual.nii.gz => sub-unf02_space-other_T2star_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-unf02/anat/{sub-unf02_space-other_T2w_seg-manual.json => sub-unf02_space-other_T2w_label-SC_seg.json} (100%) rename derivatives/labels/sub-unf02/anat/{sub-unf02_space-other_T2w_seg-manual.nii.gz => sub-unf02_space-other_T2w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-unf02/anat/{sub-unf02_space-other_T2w_labels-disc-manual.json => sub-unf02_space-other_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-unf02/anat/{sub-unf02_space-other_T2w_labels-disc-manual.nii.gz => sub-unf02_space-other_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-unf02/dwi/{sub-unf02_rec-average_dwi_seg-manual.json => sub-unf02_rec-average_dwi_label-SC_seg.json} (100%) rename derivatives/labels/sub-unf02/dwi/{sub-unf02_rec-average_dwi_seg-manual.nii.gz => sub-unf02_rec-average_dwi_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-unf03/anat/{sub-unf03_flip-1_mt-on_space-other_MTS_seg-manual.json => sub-unf03_flip-1_mt-on_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-unf03/anat/{sub-unf03_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz => sub-unf03_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-unf03/anat/{sub-unf03_flip-2_mt-off_space-other_MTS_seg-manual.json => sub-unf03_flip-2_mt-off_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-unf03/anat/{sub-unf03_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz => sub-unf03_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-unf03/anat/{sub-unf03_space-other_T1w_seg-manual.json => sub-unf03_space-other_T1w_label-SC_seg.json} (100%) rename derivatives/labels/sub-unf03/anat/{sub-unf03_space-other_T1w_seg-manual.nii.gz => sub-unf03_space-other_T1w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-unf03/anat/{sub-unf03_space-other_T1w_labels-disc-manual.json => sub-unf03_space-other_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-unf03/anat/{sub-unf03_space-other_T1w_labels-disc-manual.nii.gz => sub-unf03_space-other_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-unf03/anat/{sub-unf03_space-other_T2star_seg-manual.json => sub-unf03_space-other_T2star_label-SC_seg.json} (100%) rename derivatives/labels/sub-unf03/anat/{sub-unf03_space-other_T2star_seg-manual.nii.gz => sub-unf03_space-other_T2star_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-unf03/anat/{sub-unf03_space-other_T2w_seg-manual.json => sub-unf03_space-other_T2w_label-SC_seg.json} (100%) rename derivatives/labels/sub-unf03/anat/{sub-unf03_space-other_T2w_seg-manual.nii.gz => sub-unf03_space-other_T2w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-unf03/anat/{sub-unf03_space-other_T2w_labels-disc-manual.json => sub-unf03_space-other_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-unf03/anat/{sub-unf03_space-other_T2w_labels-disc-manual.nii.gz => sub-unf03_space-other_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-unf03/dwi/{sub-unf03_rec-average_dwi_seg-manual.json => sub-unf03_rec-average_dwi_label-SC_seg.json} (100%) rename derivatives/labels/sub-unf03/dwi/{sub-unf03_rec-average_dwi_seg-manual.nii.gz => sub-unf03_rec-average_dwi_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-unf04/anat/{sub-unf04_flip-1_mt-on_space-other_MTS_seg-manual.json => sub-unf04_flip-1_mt-on_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-unf04/anat/{sub-unf04_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz => sub-unf04_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-unf04/anat/{sub-unf04_flip-2_mt-off_space-other_MTS_seg-manual.json => sub-unf04_flip-2_mt-off_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-unf04/anat/{sub-unf04_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz => sub-unf04_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-unf04/anat/{sub-unf04_space-other_T1w_seg-manual.json => sub-unf04_space-other_T1w_label-SC_seg.json} (100%) rename derivatives/labels/sub-unf04/anat/{sub-unf04_space-other_T1w_seg-manual.nii.gz => sub-unf04_space-other_T1w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-unf04/anat/{sub-unf04_space-other_T1w_labels-disc-manual.json => sub-unf04_space-other_T1w_label-discs_dlabel.json} 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sub-unf04_space-other_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-unf04/dwi/{sub-unf04_rec-average_dwi_seg-manual.json => sub-unf04_rec-average_dwi_label-SC_seg.json} (100%) rename derivatives/labels/sub-unf04/dwi/{sub-unf04_rec-average_dwi_seg-manual.nii.gz => sub-unf04_rec-average_dwi_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-unf05/anat/{sub-unf05_flip-1_mt-on_space-other_MTS_seg-manual.json => sub-unf05_flip-1_mt-on_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-unf05/anat/{sub-unf05_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz => sub-unf05_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-unf05/anat/{sub-unf05_flip-2_mt-off_space-other_MTS_seg-manual.json => sub-unf05_flip-2_mt-off_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-unf05/anat/{sub-unf05_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz => sub-unf05_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-unf05/anat/{sub-unf05_space-other_T1w_seg-manual.json => sub-unf05_space-other_T1w_label-SC_seg.json} (100%) rename derivatives/labels/sub-unf05/anat/{sub-unf05_space-other_T1w_seg-manual.nii.gz => sub-unf05_space-other_T1w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-unf05/anat/{sub-unf05_space-other_T1w_labels-disc-manual.json => sub-unf05_space-other_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-unf05/anat/{sub-unf05_space-other_T1w_labels-disc-manual.nii.gz => sub-unf05_space-other_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-unf05/anat/{sub-unf05_space-other_T2star_seg-manual.json => sub-unf05_space-other_T2star_label-SC_seg.json} (100%) rename derivatives/labels/sub-unf05/anat/{sub-unf05_space-other_T2star_seg-manual.nii.gz => sub-unf05_space-other_T2star_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-unf05/anat/{sub-unf05_space-other_T2w_seg-manual.json => sub-unf05_space-other_T2w_label-SC_seg.json} (100%) rename derivatives/labels/sub-unf05/anat/{sub-unf05_space-other_T2w_seg-manual.nii.gz => sub-unf05_space-other_T2w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-unf05/anat/{sub-unf05_space-other_T2w_labels-disc-manual.json => sub-unf05_space-other_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-unf05/anat/{sub-unf05_space-other_T2w_labels-disc-manual.nii.gz => sub-unf05_space-other_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-unf05/dwi/{sub-unf05_rec-average_dwi_seg-manual.json => sub-unf05_rec-average_dwi_label-SC_seg.json} (100%) rename derivatives/labels/sub-unf05/dwi/{sub-unf05_rec-average_dwi_seg-manual.nii.gz => sub-unf05_rec-average_dwi_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-unf06/anat/{sub-unf06_flip-1_mt-on_space-other_MTS_seg-manual.json => sub-unf06_flip-1_mt-on_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-unf06/anat/{sub-unf06_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz => sub-unf06_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-unf06/anat/{sub-unf06_flip-2_mt-off_space-other_MTS_seg-manual.json => sub-unf06_flip-2_mt-off_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-unf06/anat/{sub-unf06_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz => sub-unf06_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-unf06/anat/{sub-unf06_space-other_T1w_seg-manual.json => sub-unf06_space-other_T1w_label-SC_seg.json} (100%) rename derivatives/labels/sub-unf06/anat/{sub-unf06_space-other_T1w_seg-manual.nii.gz => sub-unf06_space-other_T1w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-unf06/anat/{sub-unf06_space-other_T1w_labels-disc-manual.json => sub-unf06_space-other_T1w_label-discs_dlabel.json} 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sub-unf06_space-other_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-unf06/dwi/{sub-unf06_rec-average_dwi_seg-manual.json => sub-unf06_rec-average_dwi_label-SC_seg.json} (100%) rename derivatives/labels/sub-unf06/dwi/{sub-unf06_rec-average_dwi_seg-manual.nii.gz => sub-unf06_rec-average_dwi_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-unf07/anat/{sub-unf07_flip-1_mt-on_space-other_MTS_seg-manual.json => sub-unf07_flip-1_mt-on_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-unf07/anat/{sub-unf07_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz => sub-unf07_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-unf07/anat/{sub-unf07_flip-2_mt-off_space-other_MTS_seg-manual.json => sub-unf07_flip-2_mt-off_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-unf07/anat/{sub-unf07_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz => sub-unf07_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-unf07/anat/{sub-unf07_space-other_T1w_seg-manual.json => sub-unf07_space-other_T1w_label-SC_seg.json} (100%) rename derivatives/labels/sub-unf07/anat/{sub-unf07_space-other_T1w_seg-manual.nii.gz => sub-unf07_space-other_T1w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-unf07/anat/{sub-unf07_space-other_T1w_labels-disc-manual.json => sub-unf07_space-other_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-unf07/anat/{sub-unf07_space-other_T1w_labels-disc-manual.nii.gz => sub-unf07_space-other_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-unf07/anat/{sub-unf07_space-other_T2star_seg-manual.json => sub-unf07_space-other_T2star_label-SC_seg.json} (100%) rename derivatives/labels/sub-unf07/anat/{sub-unf07_space-other_T2star_seg-manual.nii.gz => sub-unf07_space-other_T2star_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-unf07/anat/{sub-unf07_space-other_T2w_seg-manual.json => sub-unf07_space-other_T2w_label-SC_seg.json} (100%) rename derivatives/labels/sub-unf07/anat/{sub-unf07_space-other_T2w_seg-manual.nii.gz => sub-unf07_space-other_T2w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-unf07/anat/{sub-unf07_space-other_T2w_labels-disc-manual.json => sub-unf07_space-other_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-unf07/anat/{sub-unf07_space-other_T2w_labels-disc-manual.nii.gz => sub-unf07_space-other_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-unf07/dwi/{sub-unf07_rec-average_dwi_seg-manual.json => sub-unf07_rec-average_dwi_label-SC_seg.json} (100%) rename derivatives/labels/sub-unf07/dwi/{sub-unf07_rec-average_dwi_seg-manual.nii.gz => sub-unf07_rec-average_dwi_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-vallHebron01/anat/{sub-vallHebron01_flip-1_mt-on_space-other_MTS_seg-manual.json => sub-vallHebron01_flip-1_mt-on_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-vallHebron01/anat/{sub-vallHebron01_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz => sub-vallHebron01_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-vallHebron01/anat/{sub-vallHebron01_flip-2_mt-off_space-other_MTS_seg-manual.json => sub-vallHebron01_flip-2_mt-off_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-vallHebron01/anat/{sub-vallHebron01_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz => sub-vallHebron01_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-vallHebron01/anat/{sub-vallHebron01_space-other_T1w_seg-manual.json => sub-vallHebron01_space-other_T1w_label-SC_seg.json} (100%) rename derivatives/labels/sub-vallHebron01/anat/{sub-vallHebron01_space-other_T1w_seg-manual.nii.gz => sub-vallHebron01_space-other_T1w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-vallHebron01/anat/{sub-vallHebron01_space-other_T1w_labels-disc-manual.json => sub-vallHebron01_space-other_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-vallHebron01/anat/{sub-vallHebron01_space-other_T1w_labels-disc-manual.nii.gz => sub-vallHebron01_space-other_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-vallHebron01/anat/{sub-vallHebron01_space-other_T2star_seg-manual.json => sub-vallHebron01_space-other_T2star_label-SC_seg.json} (100%) rename derivatives/labels/sub-vallHebron01/anat/{sub-vallHebron01_space-other_T2star_seg-manual.nii.gz => sub-vallHebron01_space-other_T2star_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-vallHebron01/anat/{sub-vallHebron01_space-other_T2w_seg-manual.json => sub-vallHebron01_space-other_T2w_label-SC_seg.json} (100%) rename derivatives/labels/sub-vallHebron01/anat/{sub-vallHebron01_space-other_T2w_seg-manual.nii.gz => sub-vallHebron01_space-other_T2w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-vallHebron01/anat/{sub-vallHebron01_space-other_T2w_labels-disc-manual.json => sub-vallHebron01_space-other_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-vallHebron01/anat/{sub-vallHebron01_space-other_T2w_labels-disc-manual.nii.gz => sub-vallHebron01_space-other_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-vallHebron01/dwi/{sub-vallHebron01_rec-average_dwi_seg-manual.json => sub-vallHebron01_rec-average_dwi_label-SC_seg.json} (100%) rename derivatives/labels/sub-vallHebron01/dwi/{sub-vallHebron01_rec-average_dwi_seg-manual.nii.gz => sub-vallHebron01_rec-average_dwi_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-vallHebron02/anat/{sub-vallHebron02_flip-1_mt-on_space-other_MTS_seg-manual.json => sub-vallHebron02_flip-1_mt-on_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-vallHebron02/anat/{sub-vallHebron02_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz => sub-vallHebron02_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-vallHebron02/anat/{sub-vallHebron02_flip-2_mt-off_space-other_MTS_seg-manual.json => sub-vallHebron02_flip-2_mt-off_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-vallHebron02/anat/{sub-vallHebron02_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz => sub-vallHebron02_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-vallHebron02/anat/{sub-vallHebron02_space-other_T1w_seg-manual.json => sub-vallHebron02_space-other_T1w_label-SC_seg.json} (100%) rename derivatives/labels/sub-vallHebron02/anat/{sub-vallHebron02_space-other_T1w_seg-manual.nii.gz => sub-vallHebron02_space-other_T1w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-vallHebron02/anat/{sub-vallHebron02_space-other_T1w_labels-disc-manual.json => sub-vallHebron02_space-other_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-vallHebron02/anat/{sub-vallHebron02_space-other_T1w_labels-disc-manual.nii.gz => sub-vallHebron02_space-other_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-vallHebron02/anat/{sub-vallHebron02_space-other_T2star_seg-manual.json => sub-vallHebron02_space-other_T2star_label-SC_seg.json} (100%) rename derivatives/labels/sub-vallHebron02/anat/{sub-vallHebron02_space-other_T2star_seg-manual.nii.gz => sub-vallHebron02_space-other_T2star_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-vallHebron02/anat/{sub-vallHebron02_space-other_T2w_seg-manual.json => sub-vallHebron02_space-other_T2w_label-SC_seg.json} (100%) rename derivatives/labels/sub-vallHebron02/anat/{sub-vallHebron02_space-other_T2w_seg-manual.nii.gz => sub-vallHebron02_space-other_T2w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-vallHebron02/anat/{sub-vallHebron02_space-other_T2w_labels-disc-manual.json => sub-vallHebron02_space-other_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-vallHebron02/anat/{sub-vallHebron02_space-other_T2w_labels-disc-manual.nii.gz => sub-vallHebron02_space-other_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-vallHebron02/dwi/{sub-vallHebron02_rec-average_dwi_seg-manual.json => sub-vallHebron02_rec-average_dwi_label-SC_seg.json} (100%) rename derivatives/labels/sub-vallHebron02/dwi/{sub-vallHebron02_rec-average_dwi_seg-manual.nii.gz => sub-vallHebron02_rec-average_dwi_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-vallHebron03/anat/{sub-vallHebron03_flip-1_mt-on_space-other_MTS_seg-manual.json => sub-vallHebron03_flip-1_mt-on_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-vallHebron03/anat/{sub-vallHebron03_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz => sub-vallHebron03_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-vallHebron03/anat/{sub-vallHebron03_flip-2_mt-off_space-other_MTS_seg-manual.json => sub-vallHebron03_flip-2_mt-off_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-vallHebron03/anat/{sub-vallHebron03_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz => sub-vallHebron03_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-vallHebron03/anat/{sub-vallHebron03_space-other_T1w_seg-manual.json => sub-vallHebron03_space-other_T1w_label-SC_seg.json} (100%) rename derivatives/labels/sub-vallHebron03/anat/{sub-vallHebron03_space-other_T1w_seg-manual.nii.gz => sub-vallHebron03_space-other_T1w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-vallHebron03/anat/{sub-vallHebron03_space-other_T1w_labels-disc-manual.json => sub-vallHebron03_space-other_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-vallHebron03/anat/{sub-vallHebron03_space-other_T1w_labels-disc-manual.nii.gz => sub-vallHebron03_space-other_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-vallHebron03/anat/{sub-vallHebron03_space-other_T2star_seg-manual.json => sub-vallHebron03_space-other_T2star_label-SC_seg.json} (100%) rename derivatives/labels/sub-vallHebron03/anat/{sub-vallHebron03_space-other_T2star_seg-manual.nii.gz => sub-vallHebron03_space-other_T2star_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-vallHebron03/anat/{sub-vallHebron03_space-other_T2w_seg-manual.json => sub-vallHebron03_space-other_T2w_label-SC_seg.json} (100%) rename derivatives/labels/sub-vallHebron03/anat/{sub-vallHebron03_space-other_T2w_seg-manual.nii.gz => sub-vallHebron03_space-other_T2w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-vallHebron03/anat/{sub-vallHebron03_space-other_T2w_labels-disc-manual.json => sub-vallHebron03_space-other_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-vallHebron03/anat/{sub-vallHebron03_space-other_T2w_labels-disc-manual.nii.gz => sub-vallHebron03_space-other_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-vallHebron03/dwi/{sub-vallHebron03_rec-average_dwi_seg-manual.json => sub-vallHebron03_rec-average_dwi_label-SC_seg.json} (100%) rename derivatives/labels/sub-vallHebron03/dwi/{sub-vallHebron03_rec-average_dwi_seg-manual.nii.gz => sub-vallHebron03_rec-average_dwi_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-vallHebron04/anat/{sub-vallHebron04_flip-1_mt-on_space-other_MTS_seg-manual.json => sub-vallHebron04_flip-1_mt-on_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-vallHebron04/anat/{sub-vallHebron04_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz => sub-vallHebron04_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-vallHebron04/anat/{sub-vallHebron04_flip-2_mt-off_space-other_MTS_seg-manual.json => sub-vallHebron04_flip-2_mt-off_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-vallHebron04/anat/{sub-vallHebron04_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz => sub-vallHebron04_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-vallHebron04/anat/{sub-vallHebron04_space-other_T1w_seg-manual.json => sub-vallHebron04_space-other_T1w_label-SC_seg.json} (100%) rename derivatives/labels/sub-vallHebron04/anat/{sub-vallHebron04_space-other_T1w_seg-manual.nii.gz => sub-vallHebron04_space-other_T1w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-vallHebron04/anat/{sub-vallHebron04_space-other_T1w_labels-disc-manual.json => sub-vallHebron04_space-other_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-vallHebron04/anat/{sub-vallHebron04_space-other_T1w_labels-disc-manual.nii.gz => sub-vallHebron04_space-other_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-vallHebron04/anat/{sub-vallHebron04_space-other_T2star_seg-manual.json => sub-vallHebron04_space-other_T2star_label-SC_seg.json} (100%) rename derivatives/labels/sub-vallHebron04/anat/{sub-vallHebron04_space-other_T2star_seg-manual.nii.gz => sub-vallHebron04_space-other_T2star_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-vallHebron04/anat/{sub-vallHebron04_space-other_T2w_seg-manual.json => sub-vallHebron04_space-other_T2w_label-SC_seg.json} (100%) rename derivatives/labels/sub-vallHebron04/anat/{sub-vallHebron04_space-other_T2w_seg-manual.nii.gz => sub-vallHebron04_space-other_T2w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-vallHebron04/anat/{sub-vallHebron04_space-other_T2w_labels-disc-manual.json => sub-vallHebron04_space-other_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-vallHebron04/anat/{sub-vallHebron04_space-other_T2w_labels-disc-manual.nii.gz => sub-vallHebron04_space-other_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-vallHebron04/dwi/{sub-vallHebron04_rec-average_dwi_seg-manual.json => sub-vallHebron04_rec-average_dwi_label-SC_seg.json} (100%) rename derivatives/labels/sub-vallHebron04/dwi/{sub-vallHebron04_rec-average_dwi_seg-manual.nii.gz => sub-vallHebron04_rec-average_dwi_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-vallHebron05/anat/{sub-vallHebron05_flip-1_mt-on_space-other_MTS_seg-manual.json => sub-vallHebron05_flip-1_mt-on_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-vallHebron05/anat/{sub-vallHebron05_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz => sub-vallHebron05_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-vallHebron05/anat/{sub-vallHebron05_flip-2_mt-off_space-other_MTS_seg-manual.json => sub-vallHebron05_flip-2_mt-off_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-vallHebron05/anat/{sub-vallHebron05_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz => sub-vallHebron05_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-vallHebron05/anat/{sub-vallHebron05_space-other_T1w_seg-manual.json => sub-vallHebron05_space-other_T1w_label-SC_seg.json} (100%) rename derivatives/labels/sub-vallHebron05/anat/{sub-vallHebron05_space-other_T1w_seg-manual.nii.gz => sub-vallHebron05_space-other_T1w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-vallHebron05/anat/{sub-vallHebron05_space-other_T1w_labels-disc-manual.json => sub-vallHebron05_space-other_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-vallHebron05/anat/{sub-vallHebron05_space-other_T1w_labels-disc-manual.nii.gz => sub-vallHebron05_space-other_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-vallHebron05/anat/{sub-vallHebron05_space-other_T2star_seg-manual.json => sub-vallHebron05_space-other_T2star_label-SC_seg.json} (100%) rename derivatives/labels/sub-vallHebron05/anat/{sub-vallHebron05_space-other_T2star_seg-manual.nii.gz => sub-vallHebron05_space-other_T2star_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-vallHebron05/anat/{sub-vallHebron05_space-other_T2w_seg-manual.json => sub-vallHebron05_space-other_T2w_label-SC_seg.json} (100%) rename derivatives/labels/sub-vallHebron05/anat/{sub-vallHebron05_space-other_T2w_seg-manual.nii.gz => sub-vallHebron05_space-other_T2w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-vallHebron05/anat/{sub-vallHebron05_space-other_T2w_labels-disc-manual.json => sub-vallHebron05_space-other_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-vallHebron05/anat/{sub-vallHebron05_space-other_T2w_labels-disc-manual.nii.gz => sub-vallHebron05_space-other_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-vallHebron05/dwi/{sub-vallHebron05_rec-average_dwi_seg-manual.json => sub-vallHebron05_rec-average_dwi_label-SC_seg.json} (100%) rename derivatives/labels/sub-vallHebron05/dwi/{sub-vallHebron05_rec-average_dwi_seg-manual.nii.gz => sub-vallHebron05_rec-average_dwi_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-vallHebron06/anat/{sub-vallHebron06_flip-1_mt-on_space-other_MTS_seg-manual.json => sub-vallHebron06_flip-1_mt-on_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-vallHebron06/anat/{sub-vallHebron06_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz => sub-vallHebron06_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-vallHebron06/anat/{sub-vallHebron06_flip-2_mt-off_space-other_MTS_seg-manual.json => sub-vallHebron06_flip-2_mt-off_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-vallHebron06/anat/{sub-vallHebron06_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz => sub-vallHebron06_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-vallHebron06/anat/{sub-vallHebron06_space-other_T1w_seg-manual.json => sub-vallHebron06_space-other_T1w_label-SC_seg.json} (100%) rename derivatives/labels/sub-vallHebron06/anat/{sub-vallHebron06_space-other_T1w_seg-manual.nii.gz => sub-vallHebron06_space-other_T1w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-vallHebron06/anat/{sub-vallHebron06_space-other_T1w_labels-disc-manual.json => sub-vallHebron06_space-other_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-vallHebron06/anat/{sub-vallHebron06_space-other_T1w_labels-disc-manual.nii.gz => sub-vallHebron06_space-other_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-vallHebron06/anat/{sub-vallHebron06_space-other_T2star_seg-manual.json => sub-vallHebron06_space-other_T2star_label-SC_seg.json} (100%) rename derivatives/labels/sub-vallHebron06/anat/{sub-vallHebron06_space-other_T2star_seg-manual.nii.gz => sub-vallHebron06_space-other_T2star_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-vallHebron06/anat/{sub-vallHebron06_space-other_T2w_seg-manual.json => sub-vallHebron06_space-other_T2w_label-SC_seg.json} (100%) rename derivatives/labels/sub-vallHebron06/anat/{sub-vallHebron06_space-other_T2w_seg-manual.nii.gz => sub-vallHebron06_space-other_T2w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-vallHebron06/anat/{sub-vallHebron06_space-other_T2w_labels-disc-manual.json => sub-vallHebron06_space-other_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-vallHebron06/anat/{sub-vallHebron06_space-other_T2w_labels-disc-manual.nii.gz => sub-vallHebron06_space-other_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-vallHebron06/dwi/{sub-vallHebron06_rec-average_dwi_seg-manual.json => sub-vallHebron06_rec-average_dwi_label-SC_seg.json} (100%) rename derivatives/labels/sub-vallHebron06/dwi/{sub-vallHebron06_rec-average_dwi_seg-manual.nii.gz => sub-vallHebron06_rec-average_dwi_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-vallHebron07/anat/{sub-vallHebron07_flip-1_mt-on_space-other_MTS_seg-manual.json => sub-vallHebron07_flip-1_mt-on_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-vallHebron07/anat/{sub-vallHebron07_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz => sub-vallHebron07_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-vallHebron07/anat/{sub-vallHebron07_flip-2_mt-off_space-other_MTS_seg-manual.json => sub-vallHebron07_flip-2_mt-off_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-vallHebron07/anat/{sub-vallHebron07_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz => sub-vallHebron07_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-vallHebron07/anat/{sub-vallHebron07_space-other_T1w_seg-manual.json => sub-vallHebron07_space-other_T1w_label-SC_seg.json} (100%) rename derivatives/labels/sub-vallHebron07/anat/{sub-vallHebron07_space-other_T1w_seg-manual.nii.gz => sub-vallHebron07_space-other_T1w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-vallHebron07/anat/{sub-vallHebron07_space-other_T1w_labels-disc-manual.json => sub-vallHebron07_space-other_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-vallHebron07/anat/{sub-vallHebron07_space-other_T1w_labels-disc-manual.nii.gz => sub-vallHebron07_space-other_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-vallHebron07/anat/{sub-vallHebron07_space-other_T2star_seg-manual.json => sub-vallHebron07_space-other_T2star_label-SC_seg.json} (100%) rename derivatives/labels/sub-vallHebron07/anat/{sub-vallHebron07_space-other_T2star_seg-manual.nii.gz => sub-vallHebron07_space-other_T2star_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-vallHebron07/anat/{sub-vallHebron07_space-other_T2w_seg-manual.json => sub-vallHebron07_space-other_T2w_label-SC_seg.json} (100%) rename derivatives/labels/sub-vallHebron07/anat/{sub-vallHebron07_space-other_T2w_seg-manual.nii.gz => sub-vallHebron07_space-other_T2w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-vallHebron07/anat/{sub-vallHebron07_space-other_T2w_labels-disc-manual.json => sub-vallHebron07_space-other_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-vallHebron07/anat/{sub-vallHebron07_space-other_T2w_labels-disc-manual.nii.gz => sub-vallHebron07_space-other_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-vallHebron07/dwi/{sub-vallHebron07_rec-average_dwi_seg-manual.json => sub-vallHebron07_rec-average_dwi_label-SC_seg.json} (100%) rename derivatives/labels/sub-vallHebron07/dwi/{sub-vallHebron07_rec-average_dwi_seg-manual.nii.gz => sub-vallHebron07_rec-average_dwi_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-vuiisAchieva01/anat/{sub-vuiisAchieva01_flip-1_mt-on_space-other_MTS_seg-manual.json => sub-vuiisAchieva01_flip-1_mt-on_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-vuiisAchieva01/anat/{sub-vuiisAchieva01_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz => sub-vuiisAchieva01_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-vuiisAchieva01/anat/{sub-vuiisAchieva01_flip-2_mt-off_space-other_MTS_seg-manual.json => sub-vuiisAchieva01_flip-2_mt-off_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-vuiisAchieva01/anat/{sub-vuiisAchieva01_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz => sub-vuiisAchieva01_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-vuiisAchieva01/anat/{sub-vuiisAchieva01_space-other_T1w_seg-manual.json => sub-vuiisAchieva01_space-other_T1w_label-SC_seg.json} (100%) rename derivatives/labels/sub-vuiisAchieva01/anat/{sub-vuiisAchieva01_space-other_T1w_seg-manual.nii.gz => sub-vuiisAchieva01_space-other_T1w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-vuiisAchieva01/anat/{sub-vuiisAchieva01_space-other_T1w_labels-disc-manual.json => sub-vuiisAchieva01_space-other_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-vuiisAchieva01/anat/{sub-vuiisAchieva01_space-other_T1w_labels-disc-manual.nii.gz => sub-vuiisAchieva01_space-other_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-vuiisAchieva01/anat/{sub-vuiisAchieva01_space-other_T2star_gmseg-manual.json => sub-vuiisAchieva01_space-other_T2star_gmlabel-SC_seg.json} (100%) rename derivatives/labels/sub-vuiisAchieva01/anat/{sub-vuiisAchieva01_space-other_T2star_gmseg-manual.nii.gz => sub-vuiisAchieva01_space-other_T2star_gmlabel-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-vuiisAchieva01/anat/{sub-vuiisAchieva01_space-other_T2star_seg-manual.json => sub-vuiisAchieva01_space-other_T2star_label-SC_seg.json} (100%) rename derivatives/labels/sub-vuiisAchieva01/anat/{sub-vuiisAchieva01_space-other_T2star_seg-manual.nii.gz => sub-vuiisAchieva01_space-other_T2star_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-vuiisAchieva01/anat/{sub-vuiisAchieva01_space-other_T2w_seg-manual.json => sub-vuiisAchieva01_space-other_T2w_label-SC_seg.json} (100%) rename derivatives/labels/sub-vuiisAchieva01/anat/{sub-vuiisAchieva01_space-other_T2w_seg-manual.nii.gz => sub-vuiisAchieva01_space-other_T2w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-vuiisAchieva01/anat/{sub-vuiisAchieva01_space-other_T2w_labels-disc-manual.json => sub-vuiisAchieva01_space-other_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-vuiisAchieva01/anat/{sub-vuiisAchieva01_space-other_T2w_labels-disc-manual.nii.gz => sub-vuiisAchieva01_space-other_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-vuiisAchieva01/dwi/{sub-vuiisAchieva01_rec-average_dwi_seg-manual.json => sub-vuiisAchieva01_rec-average_dwi_label-SC_seg.json} (100%) rename derivatives/labels/sub-vuiisAchieva01/dwi/{sub-vuiisAchieva01_rec-average_dwi_seg-manual.nii.gz => sub-vuiisAchieva01_rec-average_dwi_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-vuiisAchieva02/anat/{sub-vuiisAchieva02_flip-1_mt-on_space-other_MTS_seg-manual.json => sub-vuiisAchieva02_flip-1_mt-on_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-vuiisAchieva02/anat/{sub-vuiisAchieva02_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz => sub-vuiisAchieva02_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-vuiisAchieva02/anat/{sub-vuiisAchieva02_flip-2_mt-off_space-other_MTS_seg-manual.json => sub-vuiisAchieva02_flip-2_mt-off_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-vuiisAchieva02/anat/{sub-vuiisAchieva02_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz => sub-vuiisAchieva02_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-vuiisAchieva02/anat/{sub-vuiisAchieva02_space-other_T1w_seg-manual.json => sub-vuiisAchieva02_space-other_T1w_label-SC_seg.json} (100%) rename derivatives/labels/sub-vuiisAchieva02/anat/{sub-vuiisAchieva02_space-other_T1w_seg-manual.nii.gz => sub-vuiisAchieva02_space-other_T1w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-vuiisAchieva02/anat/{sub-vuiisAchieva02_space-other_T1w_labels-disc-manual.json => sub-vuiisAchieva02_space-other_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-vuiisAchieva02/anat/{sub-vuiisAchieva02_space-other_T1w_labels-disc-manual.nii.gz => sub-vuiisAchieva02_space-other_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-vuiisAchieva02/anat/{sub-vuiisAchieva02_space-other_T2star_seg-manual.json => sub-vuiisAchieva02_space-other_T2star_label-SC_seg.json} (100%) rename derivatives/labels/sub-vuiisAchieva02/anat/{sub-vuiisAchieva02_space-other_T2star_seg-manual.nii.gz => sub-vuiisAchieva02_space-other_T2star_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-vuiisAchieva02/anat/{sub-vuiisAchieva02_space-other_T2w_seg-manual.json => sub-vuiisAchieva02_space-other_T2w_label-SC_seg.json} (100%) rename derivatives/labels/sub-vuiisAchieva02/anat/{sub-vuiisAchieva02_space-other_T2w_seg-manual.nii.gz => sub-vuiisAchieva02_space-other_T2w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-vuiisAchieva02/anat/{sub-vuiisAchieva02_space-other_T2w_labels-disc-manual.json => sub-vuiisAchieva02_space-other_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-vuiisAchieva02/anat/{sub-vuiisAchieva02_space-other_T2w_labels-disc-manual.nii.gz => sub-vuiisAchieva02_space-other_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-vuiisAchieva02/dwi/{sub-vuiisAchieva02_rec-average_dwi_seg-manual.json => sub-vuiisAchieva02_rec-average_dwi_label-SC_seg.json} (100%) rename derivatives/labels/sub-vuiisAchieva02/dwi/{sub-vuiisAchieva02_rec-average_dwi_seg-manual.nii.gz => sub-vuiisAchieva02_rec-average_dwi_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-vuiisAchieva03/anat/{sub-vuiisAchieva03_flip-1_mt-on_space-other_MTS_seg-manual.json => sub-vuiisAchieva03_flip-1_mt-on_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-vuiisAchieva03/anat/{sub-vuiisAchieva03_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz => sub-vuiisAchieva03_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-vuiisAchieva03/anat/{sub-vuiisAchieva03_flip-2_mt-off_space-other_MTS_seg-manual.json => sub-vuiisAchieva03_flip-2_mt-off_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-vuiisAchieva03/anat/{sub-vuiisAchieva03_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz => sub-vuiisAchieva03_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-vuiisAchieva03/anat/{sub-vuiisAchieva03_space-other_T1w_seg-manual.json => sub-vuiisAchieva03_space-other_T1w_label-SC_seg.json} (100%) rename derivatives/labels/sub-vuiisAchieva03/anat/{sub-vuiisAchieva03_space-other_T1w_seg-manual.nii.gz => sub-vuiisAchieva03_space-other_T1w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-vuiisAchieva03/anat/{sub-vuiisAchieva03_space-other_T1w_labels-disc-manual.json => sub-vuiisAchieva03_space-other_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-vuiisAchieva03/anat/{sub-vuiisAchieva03_space-other_T1w_labels-disc-manual.nii.gz => sub-vuiisAchieva03_space-other_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-vuiisAchieva03/anat/{sub-vuiisAchieva03_space-other_T2star_seg-manual.json => sub-vuiisAchieva03_space-other_T2star_label-SC_seg.json} (100%) rename derivatives/labels/sub-vuiisAchieva03/anat/{sub-vuiisAchieva03_space-other_T2star_seg-manual.nii.gz => sub-vuiisAchieva03_space-other_T2star_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-vuiisAchieva03/anat/{sub-vuiisAchieva03_space-other_T2w_seg-manual.json => sub-vuiisAchieva03_space-other_T2w_label-SC_seg.json} (100%) rename derivatives/labels/sub-vuiisAchieva03/anat/{sub-vuiisAchieva03_space-other_T2w_seg-manual.nii.gz => sub-vuiisAchieva03_space-other_T2w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-vuiisAchieva03/anat/{sub-vuiisAchieva03_space-other_T2w_labels-disc-manual.json => sub-vuiisAchieva03_space-other_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-vuiisAchieva03/anat/{sub-vuiisAchieva03_space-other_T2w_labels-disc-manual.nii.gz => sub-vuiisAchieva03_space-other_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-vuiisAchieva03/dwi/{sub-vuiisAchieva03_rec-average_dwi_seg-manual.json => sub-vuiisAchieva03_rec-average_dwi_label-SC_seg.json} (100%) rename derivatives/labels/sub-vuiisAchieva03/dwi/{sub-vuiisAchieva03_rec-average_dwi_seg-manual.nii.gz => sub-vuiisAchieva03_rec-average_dwi_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-vuiisAchieva04/anat/{sub-vuiisAchieva04_flip-1_mt-on_space-other_MTS_seg-manual.json => sub-vuiisAchieva04_flip-1_mt-on_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-vuiisAchieva04/anat/{sub-vuiisAchieva04_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz => sub-vuiisAchieva04_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-vuiisAchieva04/anat/{sub-vuiisAchieva04_flip-2_mt-off_space-other_MTS_seg-manual.json => sub-vuiisAchieva04_flip-2_mt-off_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-vuiisAchieva04/anat/{sub-vuiisAchieva04_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz => sub-vuiisAchieva04_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-vuiisAchieva04/anat/{sub-vuiisAchieva04_space-other_T1w_seg-manual.json => sub-vuiisAchieva04_space-other_T1w_label-SC_seg.json} (100%) rename derivatives/labels/sub-vuiisAchieva04/anat/{sub-vuiisAchieva04_space-other_T1w_seg-manual.nii.gz => sub-vuiisAchieva04_space-other_T1w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-vuiisAchieva04/anat/{sub-vuiisAchieva04_space-other_T1w_labels-disc-manual.json => sub-vuiisAchieva04_space-other_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-vuiisAchieva04/anat/{sub-vuiisAchieva04_space-other_T1w_labels-disc-manual.nii.gz => sub-vuiisAchieva04_space-other_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-vuiisAchieva04/anat/{sub-vuiisAchieva04_space-other_T2star_seg-manual.json => sub-vuiisAchieva04_space-other_T2star_label-SC_seg.json} (100%) rename derivatives/labels/sub-vuiisAchieva04/anat/{sub-vuiisAchieva04_space-other_T2star_seg-manual.nii.gz => sub-vuiisAchieva04_space-other_T2star_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-vuiisAchieva04/anat/{sub-vuiisAchieva04_space-other_T2w_seg-manual.json => sub-vuiisAchieva04_space-other_T2w_label-SC_seg.json} (100%) rename derivatives/labels/sub-vuiisAchieva04/anat/{sub-vuiisAchieva04_space-other_T2w_seg-manual.nii.gz => sub-vuiisAchieva04_space-other_T2w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-vuiisAchieva04/anat/{sub-vuiisAchieva04_space-other_T2w_labels-disc-manual.json => sub-vuiisAchieva04_space-other_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-vuiisAchieva04/anat/{sub-vuiisAchieva04_space-other_T2w_labels-disc-manual.nii.gz => sub-vuiisAchieva04_space-other_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-vuiisAchieva04/dwi/{sub-vuiisAchieva04_rec-average_dwi_seg-manual.json => sub-vuiisAchieva04_rec-average_dwi_label-SC_seg.json} (100%) rename derivatives/labels/sub-vuiisAchieva04/dwi/{sub-vuiisAchieva04_rec-average_dwi_seg-manual.nii.gz => sub-vuiisAchieva04_rec-average_dwi_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-vuiisAchieva05/anat/{sub-vuiisAchieva05_flip-1_mt-on_space-other_MTS_seg-manual.json => sub-vuiisAchieva05_flip-1_mt-on_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-vuiisAchieva05/anat/{sub-vuiisAchieva05_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz => sub-vuiisAchieva05_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-vuiisAchieva05/anat/{sub-vuiisAchieva05_flip-2_mt-off_space-other_MTS_seg-manual.json => sub-vuiisAchieva05_flip-2_mt-off_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-vuiisAchieva05/anat/{sub-vuiisAchieva05_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz => sub-vuiisAchieva05_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-vuiisAchieva05/anat/{sub-vuiisAchieva05_space-other_T1w_seg-manual.json => sub-vuiisAchieva05_space-other_T1w_label-SC_seg.json} (100%) rename derivatives/labels/sub-vuiisAchieva05/anat/{sub-vuiisAchieva05_space-other_T1w_seg-manual.nii.gz => sub-vuiisAchieva05_space-other_T1w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-vuiisAchieva05/anat/{sub-vuiisAchieva05_space-other_T1w_labels-disc-manual.json => sub-vuiisAchieva05_space-other_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-vuiisAchieva05/anat/{sub-vuiisAchieva05_space-other_T1w_labels-disc-manual.nii.gz => sub-vuiisAchieva05_space-other_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-vuiisAchieva05/anat/{sub-vuiisAchieva05_space-other_T2star_seg-manual.json => sub-vuiisAchieva05_space-other_T2star_label-SC_seg.json} (100%) rename derivatives/labels/sub-vuiisAchieva05/anat/{sub-vuiisAchieva05_space-other_T2star_seg-manual.nii.gz => sub-vuiisAchieva05_space-other_T2star_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-vuiisAchieva05/anat/{sub-vuiisAchieva05_space-other_T2w_seg-manual.json => sub-vuiisAchieva05_space-other_T2w_label-SC_seg.json} (100%) rename derivatives/labels/sub-vuiisAchieva05/anat/{sub-vuiisAchieva05_space-other_T2w_seg-manual.nii.gz => sub-vuiisAchieva05_space-other_T2w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-vuiisAchieva05/anat/{sub-vuiisAchieva05_space-other_T2w_labels-disc-manual.json => sub-vuiisAchieva05_space-other_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-vuiisAchieva05/anat/{sub-vuiisAchieva05_space-other_T2w_labels-disc-manual.nii.gz => sub-vuiisAchieva05_space-other_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-vuiisAchieva05/dwi/{sub-vuiisAchieva05_rec-average_dwi_seg-manual.json => sub-vuiisAchieva05_rec-average_dwi_label-SC_seg.json} (100%) rename derivatives/labels/sub-vuiisAchieva05/dwi/{sub-vuiisAchieva05_rec-average_dwi_seg-manual.nii.gz => sub-vuiisAchieva05_rec-average_dwi_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-vuiisAchieva06/anat/{sub-vuiisAchieva06_flip-1_mt-on_space-other_MTS_seg-manual.json => sub-vuiisAchieva06_flip-1_mt-on_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-vuiisAchieva06/anat/{sub-vuiisAchieva06_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz => sub-vuiisAchieva06_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-vuiisAchieva06/anat/{sub-vuiisAchieva06_flip-2_mt-off_space-other_MTS_seg-manual.json => sub-vuiisAchieva06_flip-2_mt-off_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-vuiisAchieva06/anat/{sub-vuiisAchieva06_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz => sub-vuiisAchieva06_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-vuiisAchieva06/anat/{sub-vuiisAchieva06_space-other_T1w_seg-manual.json => sub-vuiisAchieva06_space-other_T1w_label-SC_seg.json} (100%) rename derivatives/labels/sub-vuiisAchieva06/anat/{sub-vuiisAchieva06_space-other_T1w_seg-manual.nii.gz => sub-vuiisAchieva06_space-other_T1w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-vuiisAchieva06/anat/{sub-vuiisAchieva06_space-other_T1w_labels-disc-manual.json => sub-vuiisAchieva06_space-other_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-vuiisAchieva06/anat/{sub-vuiisAchieva06_space-other_T1w_labels-disc-manual.nii.gz => sub-vuiisAchieva06_space-other_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-vuiisAchieva06/anat/{sub-vuiisAchieva06_space-other_T2star_seg-manual.json => sub-vuiisAchieva06_space-other_T2star_label-SC_seg.json} (100%) rename derivatives/labels/sub-vuiisAchieva06/anat/{sub-vuiisAchieva06_space-other_T2star_seg-manual.nii.gz => sub-vuiisAchieva06_space-other_T2star_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-vuiisAchieva06/anat/{sub-vuiisAchieva06_space-other_T2w_seg-manual.json => sub-vuiisAchieva06_space-other_T2w_label-SC_seg.json} (100%) rename derivatives/labels/sub-vuiisAchieva06/anat/{sub-vuiisAchieva06_space-other_T2w_seg-manual.nii.gz => sub-vuiisAchieva06_space-other_T2w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-vuiisAchieva06/anat/{sub-vuiisAchieva06_space-other_T2w_labels-disc-manual.json => sub-vuiisAchieva06_space-other_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-vuiisAchieva06/anat/{sub-vuiisAchieva06_space-other_T2w_labels-disc-manual.nii.gz => sub-vuiisAchieva06_space-other_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-vuiisAchieva06/dwi/{sub-vuiisAchieva06_rec-average_dwi_seg-manual.json => sub-vuiisAchieva06_rec-average_dwi_label-SC_seg.json} (100%) rename derivatives/labels/sub-vuiisAchieva06/dwi/{sub-vuiisAchieva06_rec-average_dwi_seg-manual.nii.gz => sub-vuiisAchieva06_rec-average_dwi_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-vuiisIngenia01/anat/{sub-vuiisIngenia01_flip-1_mt-on_space-other_MTS_seg-manual.json => sub-vuiisIngenia01_flip-1_mt-on_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-vuiisIngenia01/anat/{sub-vuiisIngenia01_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz => sub-vuiisIngenia01_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-vuiisIngenia01/anat/{sub-vuiisIngenia01_flip-2_mt-off_space-other_MTS_seg-manual.json => sub-vuiisIngenia01_flip-2_mt-off_space-other_MTS_label-SC_seg.json} (100%) rename derivatives/labels/sub-vuiisIngenia01/anat/{sub-vuiisIngenia01_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz => sub-vuiisIngenia01_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-vuiisIngenia01/anat/{sub-vuiisIngenia01_space-other_T1w_seg-manual.json => sub-vuiisIngenia01_space-other_T1w_label-SC_seg.json} (100%) rename derivatives/labels/sub-vuiisIngenia01/anat/{sub-vuiisIngenia01_space-other_T1w_seg-manual.nii.gz => sub-vuiisIngenia01_space-other_T1w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-vuiisIngenia01/anat/{sub-vuiisIngenia01_space-other_T1w_labels-disc-manual.json => sub-vuiisIngenia01_space-other_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-vuiisIngenia01/anat/{sub-vuiisIngenia01_space-other_T1w_labels-disc-manual.nii.gz => sub-vuiisIngenia01_space-other_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-vuiisIngenia01/anat/{sub-vuiisIngenia01_space-other_T2star_seg-manual.json => sub-vuiisIngenia01_space-other_T2star_label-SC_seg.json} (100%) rename derivatives/labels/sub-vuiisIngenia01/anat/{sub-vuiisIngenia01_space-other_T2star_seg-manual.nii.gz => 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derivatives/labels/sub-vuiisIngenia06/anat/{sub-vuiisIngenia06_space-other_T1w_labels-disc-manual.nii.gz => sub-vuiisIngenia06_space-other_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-vuiisIngenia06/anat/{sub-vuiisIngenia06_space-other_T2star_seg-manual.json => sub-vuiisIngenia06_space-other_T2star_label-SC_seg.json} (100%) rename derivatives/labels/sub-vuiisIngenia06/anat/{sub-vuiisIngenia06_space-other_T2star_seg-manual.nii.gz => sub-vuiisIngenia06_space-other_T2star_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-vuiisIngenia06/anat/{sub-vuiisIngenia06_space-other_T2w_seg-manual.json => sub-vuiisIngenia06_space-other_T2w_label-SC_seg.json} (100%) rename derivatives/labels/sub-vuiisIngenia06/anat/{sub-vuiisIngenia06_space-other_T2w_seg-manual.nii.gz => sub-vuiisIngenia06_space-other_T2w_label-SC_seg.nii.gz} (100%) rename derivatives/labels/sub-vuiisIngenia06/anat/{sub-vuiisIngenia06_space-other_T2w_labels-disc-manual.json => sub-vuiisIngenia06_space-other_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-vuiisIngenia06/anat/{sub-vuiisIngenia06_space-other_T2w_labels-disc-manual.nii.gz => sub-vuiisIngenia06_space-other_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-vuiisIngenia06/dwi/{sub-vuiisIngenia06_rec-average_dwi_seg-manual.json => sub-vuiisIngenia06_rec-average_dwi_label-SC_seg.json} (100%) rename derivatives/labels/sub-vuiisIngenia06/dwi/{sub-vuiisIngenia06_rec-average_dwi_seg-manual.nii.gz => sub-vuiisIngenia06_rec-average_dwi_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg/sub-amu01/anat/{sub-amu01_flip-1_mt-on_space-other_MTS_softseg.json => sub-amu01_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-amu01/anat/{sub-amu01_flip-1_mt-on_space-other_MTS_softseg.nii.gz => sub-amu01_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-amu01/anat/{sub-amu01_flip-2_mt-off_space-other_MTS_softseg.json => sub-amu01_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-amu01/anat/{sub-amu01_flip-2_mt-off_space-other_MTS_softseg.nii.gz => sub-amu01_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-amu01/anat/{sub-amu01_space-other_T1w_softseg.json => sub-amu01_space-other_T1w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-amu01/anat/{sub-amu01_space-other_T1w_softseg.nii.gz => sub-amu01_space-other_T1w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-amu01/anat/{sub-amu01_space-other_T2star_softseg.json => sub-amu01_space-other_T2star_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-amu01/anat/{sub-amu01_space-other_T2star_softseg.nii.gz => sub-amu01_space-other_T2star_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-amu01/anat/{sub-amu01_space-other_T2w_softseg.json => sub-amu01_space-other_T2w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-amu01/anat/{sub-amu01_space-other_T2w_softseg.nii.gz => sub-amu01_space-other_T2w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-amu01/dwi/{sub-amu01_rec-average_dwi_softseg.json => sub-amu01_rec-average_dwi_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-amu01/dwi/{sub-amu01_rec-average_dwi_softseg.nii.gz => sub-amu01_rec-average_dwi_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-amu02/anat/{sub-amu02_flip-1_mt-on_space-other_MTS_softseg.json => sub-amu02_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-amu02/anat/{sub-amu02_flip-1_mt-on_space-other_MTS_softseg.nii.gz => sub-amu02_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-amu02/anat/{sub-amu02_flip-2_mt-off_space-other_MTS_softseg.json => sub-amu02_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-amu02/anat/{sub-amu02_flip-2_mt-off_space-other_MTS_softseg.nii.gz => sub-amu02_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-amu02/anat/{sub-amu02_space-other_T1w_softseg.json => sub-amu02_space-other_T1w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-amu02/anat/{sub-amu02_space-other_T1w_softseg.nii.gz => sub-amu02_space-other_T1w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-amu02/anat/{sub-amu02_space-other_T2star_softseg.json => sub-amu02_space-other_T2star_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-amu02/anat/{sub-amu02_space-other_T2star_softseg.nii.gz => sub-amu02_space-other_T2star_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-amu02/anat/{sub-amu02_space-other_T2w_softseg.json => sub-amu02_space-other_T2w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-amu02/anat/{sub-amu02_space-other_T2w_softseg.nii.gz => sub-amu02_space-other_T2w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-amu02/dwi/{sub-amu02_rec-average_dwi_softseg.json => sub-amu02_rec-average_dwi_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-amu02/dwi/{sub-amu02_rec-average_dwi_softseg.nii.gz => sub-amu02_rec-average_dwi_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-amu03/anat/{sub-amu03_flip-1_mt-on_space-other_MTS_softseg.json => sub-amu03_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-amu03/anat/{sub-amu03_flip-1_mt-on_space-other_MTS_softseg.nii.gz => sub-amu03_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-amu03/anat/{sub-amu03_flip-2_mt-off_space-other_MTS_softseg.json => sub-amu03_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-amu03/anat/{sub-amu03_flip-2_mt-off_space-other_MTS_softseg.nii.gz => sub-amu03_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-amu03/anat/{sub-amu03_space-other_T1w_softseg.json => sub-amu03_space-other_T1w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-amu03/anat/{sub-amu03_space-other_T1w_softseg.nii.gz => sub-amu03_space-other_T1w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-amu03/anat/{sub-amu03_space-other_T2star_softseg.json => sub-amu03_space-other_T2star_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-amu03/anat/{sub-amu03_space-other_T2star_softseg.nii.gz => sub-amu03_space-other_T2star_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-amu03/anat/{sub-amu03_space-other_T2w_softseg.json => sub-amu03_space-other_T2w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-amu03/anat/{sub-amu03_space-other_T2w_softseg.nii.gz => sub-amu03_space-other_T2w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-amu03/dwi/{sub-amu03_rec-average_dwi_softseg.json => sub-amu03_rec-average_dwi_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-amu03/dwi/{sub-amu03_rec-average_dwi_softseg.nii.gz => sub-amu03_rec-average_dwi_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-amu04/anat/{sub-amu04_flip-1_mt-on_space-other_MTS_softseg.json => sub-amu04_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-amu04/anat/{sub-amu04_flip-1_mt-on_space-other_MTS_softseg.nii.gz => sub-amu04_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-amu04/anat/{sub-amu04_flip-2_mt-off_space-other_MTS_softseg.json => sub-amu04_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-amu04/anat/{sub-amu04_flip-2_mt-off_space-other_MTS_softseg.nii.gz => sub-amu04_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-amu04/anat/{sub-amu04_space-other_T1w_softseg.json => sub-amu04_space-other_T1w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-amu04/anat/{sub-amu04_space-other_T1w_softseg.nii.gz => sub-amu04_space-other_T1w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-amu04/anat/{sub-amu04_space-other_T2star_softseg.json => sub-amu04_space-other_T2star_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-amu04/anat/{sub-amu04_space-other_T2star_softseg.nii.gz => sub-amu04_space-other_T2star_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-amu04/anat/{sub-amu04_space-other_T2w_softseg.json => sub-amu04_space-other_T2w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-amu04/anat/{sub-amu04_space-other_T2w_softseg.nii.gz => sub-amu04_space-other_T2w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-amu04/dwi/{sub-amu04_rec-average_dwi_softseg.json => sub-amu04_rec-average_dwi_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-amu04/dwi/{sub-amu04_rec-average_dwi_softseg.nii.gz => sub-amu04_rec-average_dwi_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-amu05/anat/{sub-amu05_flip-1_mt-on_space-other_MTS_softseg.json => sub-amu05_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-amu05/anat/{sub-amu05_flip-1_mt-on_space-other_MTS_softseg.nii.gz => sub-amu05_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-amu05/anat/{sub-amu05_flip-2_mt-off_space-other_MTS_softseg.json => sub-amu05_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-amu05/anat/{sub-amu05_flip-2_mt-off_space-other_MTS_softseg.nii.gz => sub-amu05_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-amu05/anat/{sub-amu05_space-other_T1w_softseg.json => sub-amu05_space-other_T1w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-amu05/anat/{sub-amu05_space-other_T1w_softseg.nii.gz => sub-amu05_space-other_T1w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-amu05/anat/{sub-amu05_space-other_T2star_softseg.json => sub-amu05_space-other_T2star_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-amu05/anat/{sub-amu05_space-other_T2star_softseg.nii.gz => sub-amu05_space-other_T2star_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-amu05/anat/{sub-amu05_space-other_T2w_softseg.json => sub-amu05_space-other_T2w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-amu05/anat/{sub-amu05_space-other_T2w_softseg.nii.gz => sub-amu05_space-other_T2w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-amu05/dwi/{sub-amu05_rec-average_dwi_softseg.json => sub-amu05_rec-average_dwi_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-amu05/dwi/{sub-amu05_rec-average_dwi_softseg.nii.gz => sub-amu05_rec-average_dwi_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-balgrist01/anat/{sub-balgrist01_flip-1_mt-on_space-other_MTS_softseg.json => sub-balgrist01_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-balgrist01/anat/{sub-balgrist01_flip-1_mt-on_space-other_MTS_softseg.nii.gz => sub-balgrist01_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-balgrist01/anat/{sub-balgrist01_flip-2_mt-off_space-other_MTS_softseg.json => sub-balgrist01_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-balgrist01/anat/{sub-balgrist01_flip-2_mt-off_space-other_MTS_softseg.nii.gz => sub-balgrist01_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-balgrist01/anat/{sub-balgrist01_space-other_T1w_softseg.json => sub-balgrist01_space-other_T1w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-balgrist01/anat/{sub-balgrist01_space-other_T1w_softseg.nii.gz => sub-balgrist01_space-other_T1w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-balgrist01/anat/{sub-balgrist01_space-other_T2star_softseg.json => sub-balgrist01_space-other_T2star_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-balgrist01/anat/{sub-balgrist01_space-other_T2star_softseg.nii.gz => sub-balgrist01_space-other_T2star_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-balgrist01/anat/{sub-balgrist01_space-other_T2w_softseg.json => sub-balgrist01_space-other_T2w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-balgrist01/anat/{sub-balgrist01_space-other_T2w_softseg.nii.gz => sub-balgrist01_space-other_T2w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-balgrist01/dwi/{sub-balgrist01_rec-average_dwi_softseg.json => sub-balgrist01_rec-average_dwi_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-balgrist01/dwi/{sub-balgrist01_rec-average_dwi_softseg.nii.gz => sub-balgrist01_rec-average_dwi_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-balgrist02/anat/{sub-balgrist02_flip-1_mt-on_space-other_MTS_softseg.json => sub-balgrist02_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-balgrist02/anat/{sub-balgrist02_flip-1_mt-on_space-other_MTS_softseg.nii.gz => sub-balgrist02_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-balgrist02/anat/{sub-balgrist02_flip-2_mt-off_space-other_MTS_softseg.json => sub-balgrist02_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-balgrist02/anat/{sub-balgrist02_flip-2_mt-off_space-other_MTS_softseg.nii.gz => sub-balgrist02_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-balgrist02/anat/{sub-balgrist02_space-other_T1w_softseg.json => sub-balgrist02_space-other_T1w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-balgrist02/anat/{sub-balgrist02_space-other_T1w_softseg.nii.gz => sub-balgrist02_space-other_T1w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-balgrist02/anat/{sub-balgrist02_space-other_T2star_softseg.json => sub-balgrist02_space-other_T2star_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-balgrist02/anat/{sub-balgrist02_space-other_T2star_softseg.nii.gz => sub-balgrist02_space-other_T2star_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-balgrist02/anat/{sub-balgrist02_space-other_T2w_softseg.json => sub-balgrist02_space-other_T2w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-balgrist02/anat/{sub-balgrist02_space-other_T2w_softseg.nii.gz => sub-balgrist02_space-other_T2w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-balgrist02/dwi/{sub-balgrist02_rec-average_dwi_softseg.json => sub-balgrist02_rec-average_dwi_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-balgrist02/dwi/{sub-balgrist02_rec-average_dwi_softseg.nii.gz => sub-balgrist02_rec-average_dwi_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-balgrist03/anat/{sub-balgrist03_flip-1_mt-on_space-other_MTS_softseg.json => sub-balgrist03_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-balgrist03/anat/{sub-balgrist03_flip-1_mt-on_space-other_MTS_softseg.nii.gz => sub-balgrist03_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-balgrist03/anat/{sub-balgrist03_flip-2_mt-off_space-other_MTS_softseg.json => sub-balgrist03_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-balgrist03/anat/{sub-balgrist03_flip-2_mt-off_space-other_MTS_softseg.nii.gz => sub-balgrist03_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-balgrist03/anat/{sub-balgrist03_space-other_T1w_softseg.json => sub-balgrist03_space-other_T1w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-balgrist03/anat/{sub-balgrist03_space-other_T1w_softseg.nii.gz => sub-balgrist03_space-other_T1w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-balgrist03/anat/{sub-balgrist03_space-other_T2star_softseg.json => sub-balgrist03_space-other_T2star_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-balgrist03/anat/{sub-balgrist03_space-other_T2star_softseg.nii.gz => sub-balgrist03_space-other_T2star_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-balgrist03/anat/{sub-balgrist03_space-other_T2w_softseg.json => sub-balgrist03_space-other_T2w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-balgrist03/anat/{sub-balgrist03_space-other_T2w_softseg.nii.gz => sub-balgrist03_space-other_T2w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-balgrist03/dwi/{sub-balgrist03_rec-average_dwi_softseg.json => sub-balgrist03_rec-average_dwi_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-balgrist03/dwi/{sub-balgrist03_rec-average_dwi_softseg.nii.gz => sub-balgrist03_rec-average_dwi_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-balgrist04/anat/{sub-balgrist04_flip-1_mt-on_space-other_MTS_softseg.json => sub-balgrist04_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-balgrist04/anat/{sub-balgrist04_flip-1_mt-on_space-other_MTS_softseg.nii.gz => sub-balgrist04_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-balgrist04/anat/{sub-balgrist04_flip-2_mt-off_space-other_MTS_softseg.json => sub-balgrist04_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-balgrist04/anat/{sub-balgrist04_flip-2_mt-off_space-other_MTS_softseg.nii.gz => sub-balgrist04_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-balgrist04/anat/{sub-balgrist04_space-other_T1w_softseg.json => sub-balgrist04_space-other_T1w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-balgrist04/anat/{sub-balgrist04_space-other_T1w_softseg.nii.gz => sub-balgrist04_space-other_T1w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-balgrist04/anat/{sub-balgrist04_space-other_T2star_softseg.json => sub-balgrist04_space-other_T2star_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-balgrist04/anat/{sub-balgrist04_space-other_T2star_softseg.nii.gz => sub-balgrist04_space-other_T2star_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-balgrist04/anat/{sub-balgrist04_space-other_T2w_softseg.json => sub-balgrist04_space-other_T2w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-balgrist04/anat/{sub-balgrist04_space-other_T2w_softseg.nii.gz => sub-balgrist04_space-other_T2w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-balgrist04/dwi/{sub-balgrist04_rec-average_dwi_softseg.json => sub-balgrist04_rec-average_dwi_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-balgrist04/dwi/{sub-balgrist04_rec-average_dwi_softseg.nii.gz => sub-balgrist04_rec-average_dwi_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-balgrist05/anat/{sub-balgrist05_flip-1_mt-on_space-other_MTS_softseg.json => sub-balgrist05_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-balgrist05/anat/{sub-balgrist05_flip-1_mt-on_space-other_MTS_softseg.nii.gz => sub-balgrist05_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-balgrist05/anat/{sub-balgrist05_flip-2_mt-off_space-other_MTS_softseg.json => sub-balgrist05_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-balgrist05/anat/{sub-balgrist05_flip-2_mt-off_space-other_MTS_softseg.nii.gz => sub-balgrist05_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-balgrist05/anat/{sub-balgrist05_space-other_T1w_softseg.json => sub-balgrist05_space-other_T1w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-balgrist05/anat/{sub-balgrist05_space-other_T1w_softseg.nii.gz => sub-balgrist05_space-other_T1w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-balgrist05/anat/{sub-balgrist05_space-other_T2star_softseg.json => sub-balgrist05_space-other_T2star_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-balgrist05/anat/{sub-balgrist05_space-other_T2star_softseg.nii.gz => sub-balgrist05_space-other_T2star_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-balgrist05/anat/{sub-balgrist05_space-other_T2w_softseg.json => sub-balgrist05_space-other_T2w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-balgrist05/anat/{sub-balgrist05_space-other_T2w_softseg.nii.gz => sub-balgrist05_space-other_T2w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-balgrist05/dwi/{sub-balgrist05_rec-average_dwi_softseg.json => sub-balgrist05_rec-average_dwi_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-balgrist05/dwi/{sub-balgrist05_rec-average_dwi_softseg.nii.gz => sub-balgrist05_rec-average_dwi_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-balgrist06/anat/{sub-balgrist06_flip-1_mt-on_space-other_MTS_softseg.json => sub-balgrist06_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-balgrist06/anat/{sub-balgrist06_flip-1_mt-on_space-other_MTS_softseg.nii.gz => sub-balgrist06_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-balgrist06/anat/{sub-balgrist06_flip-2_mt-off_space-other_MTS_softseg.json => sub-balgrist06_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-balgrist06/anat/{sub-balgrist06_flip-2_mt-off_space-other_MTS_softseg.nii.gz => sub-balgrist06_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-balgrist06/anat/{sub-balgrist06_space-other_T1w_softseg.json => sub-balgrist06_space-other_T1w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-balgrist06/anat/{sub-balgrist06_space-other_T1w_softseg.nii.gz => sub-balgrist06_space-other_T1w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-balgrist06/anat/{sub-balgrist06_space-other_T2star_softseg.json => sub-balgrist06_space-other_T2star_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-balgrist06/anat/{sub-balgrist06_space-other_T2star_softseg.nii.gz => sub-balgrist06_space-other_T2star_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-balgrist06/anat/{sub-balgrist06_space-other_T2w_softseg.json => sub-balgrist06_space-other_T2w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-balgrist06/anat/{sub-balgrist06_space-other_T2w_softseg.nii.gz => sub-balgrist06_space-other_T2w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-balgrist06/dwi/{sub-balgrist06_rec-average_dwi_softseg.json => sub-balgrist06_rec-average_dwi_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-balgrist06/dwi/{sub-balgrist06_rec-average_dwi_softseg.nii.gz => sub-balgrist06_rec-average_dwi_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-barcelona01/anat/{sub-barcelona01_flip-1_mt-on_space-other_MTS_softseg.json => sub-barcelona01_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-barcelona01/anat/{sub-barcelona01_flip-1_mt-on_space-other_MTS_softseg.nii.gz => sub-barcelona01_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-barcelona01/anat/{sub-barcelona01_flip-2_mt-off_space-other_MTS_softseg.json => sub-barcelona01_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-barcelona01/anat/{sub-barcelona01_flip-2_mt-off_space-other_MTS_softseg.nii.gz => sub-barcelona01_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-barcelona01/anat/{sub-barcelona01_space-other_T1w_softseg.json => sub-barcelona01_space-other_T1w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-barcelona01/anat/{sub-barcelona01_space-other_T1w_softseg.nii.gz => sub-barcelona01_space-other_T1w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-barcelona01/anat/{sub-barcelona01_space-other_T2star_softseg.json => sub-barcelona01_space-other_T2star_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-barcelona01/anat/{sub-barcelona01_space-other_T2star_softseg.nii.gz => sub-barcelona01_space-other_T2star_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-barcelona01/anat/{sub-barcelona01_space-other_T2w_softseg.json => sub-barcelona01_space-other_T2w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-barcelona01/anat/{sub-barcelona01_space-other_T2w_softseg.nii.gz => sub-barcelona01_space-other_T2w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-barcelona01/dwi/{sub-barcelona01_rec-average_dwi_softseg.json => sub-barcelona01_rec-average_dwi_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-barcelona01/dwi/{sub-barcelona01_rec-average_dwi_softseg.nii.gz => sub-barcelona01_rec-average_dwi_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-barcelona02/anat/{sub-barcelona02_flip-1_mt-on_space-other_MTS_softseg.json => sub-barcelona02_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-barcelona02/anat/{sub-barcelona02_flip-1_mt-on_space-other_MTS_softseg.nii.gz => sub-barcelona02_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-barcelona02/anat/{sub-barcelona02_flip-2_mt-off_space-other_MTS_softseg.json => sub-barcelona02_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-barcelona02/anat/{sub-barcelona02_flip-2_mt-off_space-other_MTS_softseg.nii.gz => sub-barcelona02_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-barcelona02/anat/{sub-barcelona02_space-other_T1w_softseg.json => sub-barcelona02_space-other_T1w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-barcelona02/anat/{sub-barcelona02_space-other_T1w_softseg.nii.gz => sub-barcelona02_space-other_T1w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-barcelona02/anat/{sub-barcelona02_space-other_T2star_softseg.json => sub-barcelona02_space-other_T2star_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-barcelona02/anat/{sub-barcelona02_space-other_T2star_softseg.nii.gz => sub-barcelona02_space-other_T2star_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-barcelona02/anat/{sub-barcelona02_space-other_T2w_softseg.json => sub-barcelona02_space-other_T2w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-barcelona02/anat/{sub-barcelona02_space-other_T2w_softseg.nii.gz => sub-barcelona02_space-other_T2w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-barcelona02/dwi/{sub-barcelona02_rec-average_dwi_softseg.json => sub-barcelona02_rec-average_dwi_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-barcelona02/dwi/{sub-barcelona02_rec-average_dwi_softseg.nii.gz => sub-barcelona02_rec-average_dwi_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-barcelona03/anat/{sub-barcelona03_flip-1_mt-on_space-other_MTS_softseg.json => sub-barcelona03_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-barcelona03/anat/{sub-barcelona03_flip-1_mt-on_space-other_MTS_softseg.nii.gz => sub-barcelona03_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-barcelona03/anat/{sub-barcelona03_flip-2_mt-off_space-other_MTS_softseg.json => sub-barcelona03_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-barcelona03/anat/{sub-barcelona03_flip-2_mt-off_space-other_MTS_softseg.nii.gz => sub-barcelona03_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-barcelona03/anat/{sub-barcelona03_space-other_T1w_softseg.json => sub-barcelona03_space-other_T1w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-barcelona03/anat/{sub-barcelona03_space-other_T1w_softseg.nii.gz => sub-barcelona03_space-other_T1w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-barcelona03/anat/{sub-barcelona03_space-other_T2star_softseg.json => sub-barcelona03_space-other_T2star_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-barcelona03/anat/{sub-barcelona03_space-other_T2star_softseg.nii.gz => sub-barcelona03_space-other_T2star_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-barcelona03/anat/{sub-barcelona03_space-other_T2w_softseg.json => sub-barcelona03_space-other_T2w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-barcelona03/anat/{sub-barcelona03_space-other_T2w_softseg.nii.gz => sub-barcelona03_space-other_T2w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-barcelona03/dwi/{sub-barcelona03_rec-average_dwi_softseg.json => sub-barcelona03_rec-average_dwi_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-barcelona03/dwi/{sub-barcelona03_rec-average_dwi_softseg.nii.gz => sub-barcelona03_rec-average_dwi_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-barcelona04/anat/{sub-barcelona04_flip-1_mt-on_space-other_MTS_softseg.json => sub-barcelona04_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-barcelona04/anat/{sub-barcelona04_flip-1_mt-on_space-other_MTS_softseg.nii.gz => sub-barcelona04_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-barcelona04/anat/{sub-barcelona04_flip-2_mt-off_space-other_MTS_softseg.json => sub-barcelona04_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-barcelona04/anat/{sub-barcelona04_flip-2_mt-off_space-other_MTS_softseg.nii.gz => sub-barcelona04_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-barcelona04/anat/{sub-barcelona04_space-other_T1w_softseg.json => sub-barcelona04_space-other_T1w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-barcelona04/anat/{sub-barcelona04_space-other_T1w_softseg.nii.gz => sub-barcelona04_space-other_T1w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-barcelona04/anat/{sub-barcelona04_space-other_T2star_softseg.json => sub-barcelona04_space-other_T2star_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-barcelona04/anat/{sub-barcelona04_space-other_T2star_softseg.nii.gz => sub-barcelona04_space-other_T2star_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-barcelona04/anat/{sub-barcelona04_space-other_T2w_softseg.json => sub-barcelona04_space-other_T2w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-barcelona04/anat/{sub-barcelona04_space-other_T2w_softseg.nii.gz => sub-barcelona04_space-other_T2w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-barcelona04/dwi/{sub-barcelona04_rec-average_dwi_softseg.json => sub-barcelona04_rec-average_dwi_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-barcelona04/dwi/{sub-barcelona04_rec-average_dwi_softseg.nii.gz => sub-barcelona04_rec-average_dwi_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-barcelona05/anat/{sub-barcelona05_flip-1_mt-on_space-other_MTS_softseg.json => sub-barcelona05_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-barcelona05/anat/{sub-barcelona05_flip-1_mt-on_space-other_MTS_softseg.nii.gz => sub-barcelona05_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-barcelona05/anat/{sub-barcelona05_flip-2_mt-off_space-other_MTS_softseg.json => sub-barcelona05_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-barcelona05/anat/{sub-barcelona05_flip-2_mt-off_space-other_MTS_softseg.nii.gz => sub-barcelona05_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-barcelona05/anat/{sub-barcelona05_space-other_T1w_softseg.json => sub-barcelona05_space-other_T1w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-barcelona05/anat/{sub-barcelona05_space-other_T1w_softseg.nii.gz => sub-barcelona05_space-other_T1w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-barcelona05/anat/{sub-barcelona05_space-other_T2star_softseg.json => sub-barcelona05_space-other_T2star_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-barcelona05/anat/{sub-barcelona05_space-other_T2star_softseg.nii.gz => sub-barcelona05_space-other_T2star_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-barcelona05/anat/{sub-barcelona05_space-other_T2w_softseg.json => sub-barcelona05_space-other_T2w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-barcelona05/anat/{sub-barcelona05_space-other_T2w_softseg.nii.gz => sub-barcelona05_space-other_T2w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-barcelona05/dwi/{sub-barcelona05_rec-average_dwi_softseg.json => sub-barcelona05_rec-average_dwi_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-barcelona05/dwi/{sub-barcelona05_rec-average_dwi_softseg.nii.gz => sub-barcelona05_rec-average_dwi_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-barcelona06/anat/{sub-barcelona06_flip-1_mt-on_space-other_MTS_softseg.json => sub-barcelona06_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-barcelona06/anat/{sub-barcelona06_flip-1_mt-on_space-other_MTS_softseg.nii.gz => sub-barcelona06_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-barcelona06/anat/{sub-barcelona06_flip-2_mt-off_space-other_MTS_softseg.json => sub-barcelona06_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-barcelona06/anat/{sub-barcelona06_flip-2_mt-off_space-other_MTS_softseg.nii.gz => sub-barcelona06_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-barcelona06/anat/{sub-barcelona06_space-other_T1w_softseg.json => sub-barcelona06_space-other_T1w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-barcelona06/anat/{sub-barcelona06_space-other_T1w_softseg.nii.gz => sub-barcelona06_space-other_T1w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-barcelona06/anat/{sub-barcelona06_space-other_T2star_softseg.json => sub-barcelona06_space-other_T2star_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-barcelona06/anat/{sub-barcelona06_space-other_T2star_softseg.nii.gz => sub-barcelona06_space-other_T2star_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-barcelona06/anat/{sub-barcelona06_space-other_T2w_softseg.json => sub-barcelona06_space-other_T2w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-barcelona06/anat/{sub-barcelona06_space-other_T2w_softseg.nii.gz => sub-barcelona06_space-other_T2w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-barcelona06/dwi/{sub-barcelona06_rec-average_dwi_softseg.json => sub-barcelona06_rec-average_dwi_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-barcelona06/dwi/{sub-barcelona06_rec-average_dwi_softseg.nii.gz => sub-barcelona06_rec-average_dwi_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-beijingGE01/anat/{sub-beijingGE01_space-other_T1w_softseg.json => sub-beijingGE01_space-other_T1w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-beijingGE01/anat/{sub-beijingGE01_space-other_T1w_softseg.nii.gz => sub-beijingGE01_space-other_T1w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-beijingGE01/anat/{sub-beijingGE01_space-other_T2star_softseg.json => sub-beijingGE01_space-other_T2star_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-beijingGE01/anat/{sub-beijingGE01_space-other_T2star_softseg.nii.gz => sub-beijingGE01_space-other_T2star_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-beijingGE01/anat/{sub-beijingGE01_space-other_T2w_softseg.json => sub-beijingGE01_space-other_T2w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-beijingGE01/anat/{sub-beijingGE01_space-other_T2w_softseg.nii.gz => sub-beijingGE01_space-other_T2w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-beijingGE01/dwi/{sub-beijingGE01_rec-average_dwi_softseg.json => sub-beijingGE01_rec-average_dwi_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-beijingGE01/dwi/{sub-beijingGE01_rec-average_dwi_softseg.nii.gz => sub-beijingGE01_rec-average_dwi_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-beijingGE02/anat/{sub-beijingGE02_space-other_T1w_softseg.json => sub-beijingGE02_space-other_T1w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-beijingGE02/anat/{sub-beijingGE02_space-other_T1w_softseg.nii.gz => sub-beijingGE02_space-other_T1w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-beijingGE02/anat/{sub-beijingGE02_space-other_T2star_softseg.json => sub-beijingGE02_space-other_T2star_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-beijingGE02/anat/{sub-beijingGE02_space-other_T2star_softseg.nii.gz => sub-beijingGE02_space-other_T2star_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-beijingGE02/anat/{sub-beijingGE02_space-other_T2w_softseg.json => sub-beijingGE02_space-other_T2w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-beijingGE02/anat/{sub-beijingGE02_space-other_T2w_softseg.nii.gz => sub-beijingGE02_space-other_T2w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-beijingGE02/dwi/{sub-beijingGE02_rec-average_dwi_softseg.json => sub-beijingGE02_rec-average_dwi_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-beijingGE02/dwi/{sub-beijingGE02_rec-average_dwi_softseg.nii.gz => sub-beijingGE02_rec-average_dwi_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-beijingGE03/anat/{sub-beijingGE03_space-other_T1w_softseg.json => sub-beijingGE03_space-other_T1w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-beijingGE03/anat/{sub-beijingGE03_space-other_T1w_softseg.nii.gz => sub-beijingGE03_space-other_T1w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-beijingGE03/anat/{sub-beijingGE03_space-other_T2star_softseg.json => sub-beijingGE03_space-other_T2star_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-beijingGE03/anat/{sub-beijingGE03_space-other_T2star_softseg.nii.gz => sub-beijingGE03_space-other_T2star_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-beijingGE03/anat/{sub-beijingGE03_space-other_T2w_softseg.json => sub-beijingGE03_space-other_T2w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-beijingGE03/anat/{sub-beijingGE03_space-other_T2w_softseg.nii.gz => sub-beijingGE03_space-other_T2w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-beijingGE03/dwi/{sub-beijingGE03_rec-average_dwi_softseg.json => sub-beijingGE03_rec-average_dwi_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-beijingGE03/dwi/{sub-beijingGE03_rec-average_dwi_softseg.nii.gz => sub-beijingGE03_rec-average_dwi_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-beijingGE04/anat/{sub-beijingGE04_space-other_T1w_softseg.json => sub-beijingGE04_space-other_T1w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-beijingGE04/anat/{sub-beijingGE04_space-other_T1w_softseg.nii.gz => sub-beijingGE04_space-other_T1w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-beijingGE04/anat/{sub-beijingGE04_space-other_T2star_softseg.json => sub-beijingGE04_space-other_T2star_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-beijingGE04/anat/{sub-beijingGE04_space-other_T2star_softseg.nii.gz => sub-beijingGE04_space-other_T2star_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-beijingGE04/anat/{sub-beijingGE04_space-other_T2w_softseg.json => sub-beijingGE04_space-other_T2w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-beijingGE04/anat/{sub-beijingGE04_space-other_T2w_softseg.nii.gz => sub-beijingGE04_space-other_T2w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-beijingGE04/dwi/{sub-beijingGE04_rec-average_dwi_softseg.json => sub-beijingGE04_rec-average_dwi_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-beijingGE04/dwi/{sub-beijingGE04_rec-average_dwi_softseg.nii.gz => sub-beijingGE04_rec-average_dwi_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-beijingPrisma01/anat/{sub-beijingPrisma01_flip-1_mt-on_space-other_MTS_softseg.json => sub-beijingPrisma01_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-beijingPrisma01/anat/{sub-beijingPrisma01_flip-1_mt-on_space-other_MTS_softseg.nii.gz => sub-beijingPrisma01_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-beijingPrisma01/anat/{sub-beijingPrisma01_flip-2_mt-off_space-other_MTS_softseg.json => sub-beijingPrisma01_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-beijingPrisma01/anat/{sub-beijingPrisma01_flip-2_mt-off_space-other_MTS_softseg.nii.gz => sub-beijingPrisma01_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-beijingPrisma01/anat/{sub-beijingPrisma01_space-other_T1w_softseg.json => sub-beijingPrisma01_space-other_T1w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-beijingPrisma01/anat/{sub-beijingPrisma01_space-other_T1w_softseg.nii.gz => sub-beijingPrisma01_space-other_T1w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-beijingPrisma01/anat/{sub-beijingPrisma01_space-other_T2star_softseg.json => sub-beijingPrisma01_space-other_T2star_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-beijingPrisma01/anat/{sub-beijingPrisma01_space-other_T2star_softseg.nii.gz => sub-beijingPrisma01_space-other_T2star_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-beijingPrisma01/anat/{sub-beijingPrisma01_space-other_T2w_softseg.json => sub-beijingPrisma01_space-other_T2w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-beijingPrisma01/anat/{sub-beijingPrisma01_space-other_T2w_softseg.nii.gz => sub-beijingPrisma01_space-other_T2w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-beijingPrisma01/dwi/{sub-beijingPrisma01_rec-average_dwi_softseg.json => sub-beijingPrisma01_rec-average_dwi_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-beijingPrisma01/dwi/{sub-beijingPrisma01_rec-average_dwi_softseg.nii.gz => sub-beijingPrisma01_rec-average_dwi_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-beijingPrisma02/anat/{sub-beijingPrisma02_flip-1_mt-on_space-other_MTS_softseg.json => sub-beijingPrisma02_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-beijingPrisma02/anat/{sub-beijingPrisma02_flip-1_mt-on_space-other_MTS_softseg.nii.gz => sub-beijingPrisma02_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-beijingPrisma02/anat/{sub-beijingPrisma02_flip-2_mt-off_space-other_MTS_softseg.json => sub-beijingPrisma02_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-beijingPrisma02/anat/{sub-beijingPrisma02_flip-2_mt-off_space-other_MTS_softseg.nii.gz => sub-beijingPrisma02_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-beijingPrisma02/anat/{sub-beijingPrisma02_space-other_T1w_softseg.json => sub-beijingPrisma02_space-other_T1w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-beijingPrisma02/anat/{sub-beijingPrisma02_space-other_T1w_softseg.nii.gz => sub-beijingPrisma02_space-other_T1w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-beijingPrisma02/anat/{sub-beijingPrisma02_space-other_T2star_softseg.json => sub-beijingPrisma02_space-other_T2star_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-beijingPrisma02/anat/{sub-beijingPrisma02_space-other_T2star_softseg.nii.gz => sub-beijingPrisma02_space-other_T2star_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-beijingPrisma02/anat/{sub-beijingPrisma02_space-other_T2w_softseg.json => sub-beijingPrisma02_space-other_T2w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-beijingPrisma02/anat/{sub-beijingPrisma02_space-other_T2w_softseg.nii.gz => sub-beijingPrisma02_space-other_T2w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-beijingPrisma02/dwi/{sub-beijingPrisma02_rec-average_dwi_softseg.json => sub-beijingPrisma02_rec-average_dwi_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-beijingPrisma02/dwi/{sub-beijingPrisma02_rec-average_dwi_softseg.nii.gz => sub-beijingPrisma02_rec-average_dwi_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-beijingPrisma03/anat/{sub-beijingPrisma03_flip-1_mt-on_space-other_MTS_softseg.json => sub-beijingPrisma03_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-beijingPrisma03/anat/{sub-beijingPrisma03_flip-1_mt-on_space-other_MTS_softseg.nii.gz => sub-beijingPrisma03_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-beijingPrisma03/anat/{sub-beijingPrisma03_flip-2_mt-off_space-other_MTS_softseg.json => sub-beijingPrisma03_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-beijingPrisma03/anat/{sub-beijingPrisma03_flip-2_mt-off_space-other_MTS_softseg.nii.gz => sub-beijingPrisma03_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-beijingPrisma03/anat/{sub-beijingPrisma03_space-other_T1w_softseg.json => sub-beijingPrisma03_space-other_T1w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-beijingPrisma03/anat/{sub-beijingPrisma03_space-other_T1w_softseg.nii.gz => sub-beijingPrisma03_space-other_T1w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-beijingPrisma03/anat/{sub-beijingPrisma03_space-other_T2star_softseg.json => sub-beijingPrisma03_space-other_T2star_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-beijingPrisma03/anat/{sub-beijingPrisma03_space-other_T2star_softseg.nii.gz => sub-beijingPrisma03_space-other_T2star_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-beijingPrisma03/anat/{sub-beijingPrisma03_space-other_T2w_softseg.json => sub-beijingPrisma03_space-other_T2w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-beijingPrisma03/anat/{sub-beijingPrisma03_space-other_T2w_softseg.nii.gz => sub-beijingPrisma03_space-other_T2w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-beijingPrisma03/dwi/{sub-beijingPrisma03_rec-average_dwi_softseg.json => sub-beijingPrisma03_rec-average_dwi_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-beijingPrisma03/dwi/{sub-beijingPrisma03_rec-average_dwi_softseg.nii.gz => sub-beijingPrisma03_rec-average_dwi_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-beijingPrisma04/anat/{sub-beijingPrisma04_flip-1_mt-on_space-other_MTS_softseg.json => sub-beijingPrisma04_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-beijingPrisma04/anat/{sub-beijingPrisma04_flip-1_mt-on_space-other_MTS_softseg.nii.gz => sub-beijingPrisma04_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-beijingPrisma04/anat/{sub-beijingPrisma04_flip-2_mt-off_space-other_MTS_softseg.json => sub-beijingPrisma04_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-beijingPrisma04/anat/{sub-beijingPrisma04_flip-2_mt-off_space-other_MTS_softseg.nii.gz => sub-beijingPrisma04_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-beijingPrisma04/anat/{sub-beijingPrisma04_space-other_T1w_softseg.json => sub-beijingPrisma04_space-other_T1w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-beijingPrisma04/anat/{sub-beijingPrisma04_space-other_T1w_softseg.nii.gz => sub-beijingPrisma04_space-other_T1w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-beijingPrisma04/anat/{sub-beijingPrisma04_space-other_T2star_softseg.json => sub-beijingPrisma04_space-other_T2star_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-beijingPrisma04/anat/{sub-beijingPrisma04_space-other_T2star_softseg.nii.gz => sub-beijingPrisma04_space-other_T2star_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-beijingPrisma04/anat/{sub-beijingPrisma04_space-other_T2w_softseg.json => sub-beijingPrisma04_space-other_T2w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-beijingPrisma04/anat/{sub-beijingPrisma04_space-other_T2w_softseg.nii.gz => sub-beijingPrisma04_space-other_T2w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-beijingPrisma04/dwi/{sub-beijingPrisma04_rec-average_dwi_softseg.json => sub-beijingPrisma04_rec-average_dwi_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-beijingPrisma04/dwi/{sub-beijingPrisma04_rec-average_dwi_softseg.nii.gz => sub-beijingPrisma04_rec-average_dwi_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-beijingPrisma05/anat/{sub-beijingPrisma05_flip-1_mt-on_space-other_MTS_softseg.json => sub-beijingPrisma05_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-beijingPrisma05/anat/{sub-beijingPrisma05_flip-1_mt-on_space-other_MTS_softseg.nii.gz => sub-beijingPrisma05_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-beijingPrisma05/anat/{sub-beijingPrisma05_flip-2_mt-off_space-other_MTS_softseg.json => sub-beijingPrisma05_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-beijingPrisma05/anat/{sub-beijingPrisma05_flip-2_mt-off_space-other_MTS_softseg.nii.gz => sub-beijingPrisma05_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-beijingPrisma05/anat/{sub-beijingPrisma05_space-other_T1w_softseg.json => sub-beijingPrisma05_space-other_T1w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-beijingPrisma05/anat/{sub-beijingPrisma05_space-other_T1w_softseg.nii.gz => sub-beijingPrisma05_space-other_T1w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-beijingPrisma05/anat/{sub-beijingPrisma05_space-other_T2star_softseg.json => sub-beijingPrisma05_space-other_T2star_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-beijingPrisma05/anat/{sub-beijingPrisma05_space-other_T2star_softseg.nii.gz => sub-beijingPrisma05_space-other_T2star_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-beijingPrisma05/anat/{sub-beijingPrisma05_space-other_T2w_softseg.json => sub-beijingPrisma05_space-other_T2w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-beijingPrisma05/anat/{sub-beijingPrisma05_space-other_T2w_softseg.nii.gz => sub-beijingPrisma05_space-other_T2w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-beijingPrisma05/dwi/{sub-beijingPrisma05_rec-average_dwi_softseg.json => sub-beijingPrisma05_rec-average_dwi_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-beijingPrisma05/dwi/{sub-beijingPrisma05_rec-average_dwi_softseg.nii.gz => sub-beijingPrisma05_rec-average_dwi_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-beijingVerio01/anat/{sub-beijingVerio01_space-other_T1w_softseg.json => sub-beijingVerio01_space-other_T1w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-beijingVerio01/anat/{sub-beijingVerio01_space-other_T1w_softseg.nii.gz => sub-beijingVerio01_space-other_T1w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-beijingVerio01/anat/{sub-beijingVerio01_space-other_T2star_softseg.json => sub-beijingVerio01_space-other_T2star_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-beijingVerio01/anat/{sub-beijingVerio01_space-other_T2star_softseg.nii.gz => sub-beijingVerio01_space-other_T2star_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-beijingVerio01/anat/{sub-beijingVerio01_space-other_T2w_softseg.json => sub-beijingVerio01_space-other_T2w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-beijingVerio01/anat/{sub-beijingVerio01_space-other_T2w_softseg.nii.gz => sub-beijingVerio01_space-other_T2w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-beijingVerio01/dwi/{sub-beijingVerio01_rec-average_dwi_softseg.json => sub-beijingVerio01_rec-average_dwi_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-beijingVerio01/dwi/{sub-beijingVerio01_rec-average_dwi_softseg.nii.gz => sub-beijingVerio01_rec-average_dwi_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-beijingVerio02/anat/{sub-beijingVerio02_space-other_T1w_softseg.json => sub-beijingVerio02_space-other_T1w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-beijingVerio02/anat/{sub-beijingVerio02_space-other_T1w_softseg.nii.gz => sub-beijingVerio02_space-other_T1w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-beijingVerio02/anat/{sub-beijingVerio02_space-other_T2star_softseg.json => sub-beijingVerio02_space-other_T2star_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-beijingVerio02/anat/{sub-beijingVerio02_space-other_T2star_softseg.nii.gz => sub-beijingVerio02_space-other_T2star_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-beijingVerio02/anat/{sub-beijingVerio02_space-other_T2w_softseg.json => sub-beijingVerio02_space-other_T2w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-beijingVerio02/anat/{sub-beijingVerio02_space-other_T2w_softseg.nii.gz => sub-beijingVerio02_space-other_T2w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-beijingVerio02/dwi/{sub-beijingVerio02_rec-average_dwi_softseg.json => sub-beijingVerio02_rec-average_dwi_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-beijingVerio02/dwi/{sub-beijingVerio02_rec-average_dwi_softseg.nii.gz => sub-beijingVerio02_rec-average_dwi_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-beijingVerio03/anat/{sub-beijingVerio03_space-other_T1w_softseg.json => sub-beijingVerio03_space-other_T1w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-beijingVerio03/anat/{sub-beijingVerio03_space-other_T1w_softseg.nii.gz => sub-beijingVerio03_space-other_T1w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-beijingVerio03/anat/{sub-beijingVerio03_space-other_T2star_softseg.json => sub-beijingVerio03_space-other_T2star_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-beijingVerio03/anat/{sub-beijingVerio03_space-other_T2star_softseg.nii.gz => sub-beijingVerio03_space-other_T2star_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-beijingVerio03/anat/{sub-beijingVerio03_space-other_T2w_softseg.json => sub-beijingVerio03_space-other_T2w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-beijingVerio03/anat/{sub-beijingVerio03_space-other_T2w_softseg.nii.gz => sub-beijingVerio03_space-other_T2w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-beijingVerio03/dwi/{sub-beijingVerio03_rec-average_dwi_softseg.json => sub-beijingVerio03_rec-average_dwi_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-beijingVerio03/dwi/{sub-beijingVerio03_rec-average_dwi_softseg.nii.gz => sub-beijingVerio03_rec-average_dwi_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-beijingVerio04/anat/{sub-beijingVerio04_space-other_T1w_softseg.json => sub-beijingVerio04_space-other_T1w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-beijingVerio04/anat/{sub-beijingVerio04_space-other_T1w_softseg.nii.gz => sub-beijingVerio04_space-other_T1w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-beijingVerio04/anat/{sub-beijingVerio04_space-other_T2star_softseg.json => sub-beijingVerio04_space-other_T2star_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-beijingVerio04/anat/{sub-beijingVerio04_space-other_T2star_softseg.nii.gz => sub-beijingVerio04_space-other_T2star_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-beijingVerio04/anat/{sub-beijingVerio04_space-other_T2w_softseg.json => sub-beijingVerio04_space-other_T2w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-beijingVerio04/anat/{sub-beijingVerio04_space-other_T2w_softseg.nii.gz => sub-beijingVerio04_space-other_T2w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-beijingVerio04/dwi/{sub-beijingVerio04_rec-average_dwi_softseg.json => sub-beijingVerio04_rec-average_dwi_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-beijingVerio04/dwi/{sub-beijingVerio04_rec-average_dwi_softseg.nii.gz => sub-beijingVerio04_rec-average_dwi_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-brnoCeitec01/anat/{sub-brnoCeitec01_flip-1_mt-on_space-other_MTS_softseg.json => sub-brnoCeitec01_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-brnoCeitec01/anat/{sub-brnoCeitec01_flip-1_mt-on_space-other_MTS_softseg.nii.gz => sub-brnoCeitec01_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-brnoCeitec01/anat/{sub-brnoCeitec01_flip-2_mt-off_space-other_MTS_softseg.json => sub-brnoCeitec01_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-brnoCeitec01/anat/{sub-brnoCeitec01_flip-2_mt-off_space-other_MTS_softseg.nii.gz => sub-brnoCeitec01_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-brnoCeitec01/anat/{sub-brnoCeitec01_space-other_T1w_softseg.json => sub-brnoCeitec01_space-other_T1w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-brnoCeitec01/anat/{sub-brnoCeitec01_space-other_T1w_softseg.nii.gz => sub-brnoCeitec01_space-other_T1w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-brnoCeitec01/anat/{sub-brnoCeitec01_space-other_T2star_softseg.json => sub-brnoCeitec01_space-other_T2star_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-brnoCeitec01/anat/{sub-brnoCeitec01_space-other_T2star_softseg.nii.gz => sub-brnoCeitec01_space-other_T2star_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-brnoCeitec01/anat/{sub-brnoCeitec01_space-other_T2w_softseg.json => sub-brnoCeitec01_space-other_T2w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-brnoCeitec01/anat/{sub-brnoCeitec01_space-other_T2w_softseg.nii.gz => sub-brnoCeitec01_space-other_T2w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-brnoCeitec01/dwi/{sub-brnoCeitec01_rec-average_dwi_softseg.json => sub-brnoCeitec01_rec-average_dwi_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-brnoCeitec01/dwi/{sub-brnoCeitec01_rec-average_dwi_softseg.nii.gz => sub-brnoCeitec01_rec-average_dwi_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-brnoCeitec02/anat/{sub-brnoCeitec02_flip-1_mt-on_space-other_MTS_softseg.json => sub-brnoCeitec02_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-brnoCeitec02/anat/{sub-brnoCeitec02_flip-1_mt-on_space-other_MTS_softseg.nii.gz => sub-brnoCeitec02_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-brnoCeitec02/anat/{sub-brnoCeitec02_flip-2_mt-off_space-other_MTS_softseg.json => sub-brnoCeitec02_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-brnoCeitec02/anat/{sub-brnoCeitec02_flip-2_mt-off_space-other_MTS_softseg.nii.gz => sub-brnoCeitec02_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-brnoCeitec02/anat/{sub-brnoCeitec02_space-other_T1w_softseg.json => sub-brnoCeitec02_space-other_T1w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-brnoCeitec02/anat/{sub-brnoCeitec02_space-other_T1w_softseg.nii.gz => sub-brnoCeitec02_space-other_T1w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-brnoCeitec02/anat/{sub-brnoCeitec02_space-other_T2star_softseg.json => sub-brnoCeitec02_space-other_T2star_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-brnoCeitec02/anat/{sub-brnoCeitec02_space-other_T2star_softseg.nii.gz => sub-brnoCeitec02_space-other_T2star_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-brnoCeitec02/anat/{sub-brnoCeitec02_space-other_T2w_softseg.json => sub-brnoCeitec02_space-other_T2w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-brnoCeitec02/anat/{sub-brnoCeitec02_space-other_T2w_softseg.nii.gz => sub-brnoCeitec02_space-other_T2w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-brnoCeitec02/dwi/{sub-brnoCeitec02_rec-average_dwi_softseg.json => sub-brnoCeitec02_rec-average_dwi_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-brnoCeitec02/dwi/{sub-brnoCeitec02_rec-average_dwi_softseg.nii.gz => sub-brnoCeitec02_rec-average_dwi_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-brnoCeitec03/anat/{sub-brnoCeitec03_flip-1_mt-on_space-other_MTS_softseg.json => sub-brnoCeitec03_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-brnoCeitec03/anat/{sub-brnoCeitec03_flip-1_mt-on_space-other_MTS_softseg.nii.gz => sub-brnoCeitec03_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-brnoCeitec03/anat/{sub-brnoCeitec03_flip-2_mt-off_space-other_MTS_softseg.json => sub-brnoCeitec03_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-brnoCeitec03/anat/{sub-brnoCeitec03_flip-2_mt-off_space-other_MTS_softseg.nii.gz => sub-brnoCeitec03_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-brnoCeitec03/anat/{sub-brnoCeitec03_space-other_T1w_softseg.json => sub-brnoCeitec03_space-other_T1w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-brnoCeitec03/anat/{sub-brnoCeitec03_space-other_T1w_softseg.nii.gz => sub-brnoCeitec03_space-other_T1w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-brnoCeitec03/anat/{sub-brnoCeitec03_space-other_T2star_softseg.json => sub-brnoCeitec03_space-other_T2star_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-brnoCeitec03/anat/{sub-brnoCeitec03_space-other_T2star_softseg.nii.gz => sub-brnoCeitec03_space-other_T2star_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-brnoCeitec03/anat/{sub-brnoCeitec03_space-other_T2w_softseg.json => sub-brnoCeitec03_space-other_T2w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-brnoCeitec03/anat/{sub-brnoCeitec03_space-other_T2w_softseg.nii.gz => sub-brnoCeitec03_space-other_T2w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-brnoCeitec03/dwi/{sub-brnoCeitec03_rec-average_dwi_softseg.json => sub-brnoCeitec03_rec-average_dwi_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-brnoCeitec03/dwi/{sub-brnoCeitec03_rec-average_dwi_softseg.nii.gz => sub-brnoCeitec03_rec-average_dwi_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-brnoCeitec04/anat/{sub-brnoCeitec04_flip-1_mt-on_space-other_MTS_softseg.json => sub-brnoCeitec04_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-brnoCeitec04/anat/{sub-brnoCeitec04_flip-1_mt-on_space-other_MTS_softseg.nii.gz => sub-brnoCeitec04_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-brnoCeitec04/anat/{sub-brnoCeitec04_flip-2_mt-off_space-other_MTS_softseg.json => sub-brnoCeitec04_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-brnoCeitec04/anat/{sub-brnoCeitec04_flip-2_mt-off_space-other_MTS_softseg.nii.gz => sub-brnoCeitec04_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-brnoCeitec04/anat/{sub-brnoCeitec04_space-other_T1w_softseg.json => sub-brnoCeitec04_space-other_T1w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-brnoCeitec04/anat/{sub-brnoCeitec04_space-other_T1w_softseg.nii.gz => sub-brnoCeitec04_space-other_T1w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-brnoCeitec04/anat/{sub-brnoCeitec04_space-other_T2star_softseg.json => sub-brnoCeitec04_space-other_T2star_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-brnoCeitec04/anat/{sub-brnoCeitec04_space-other_T2star_softseg.nii.gz => sub-brnoCeitec04_space-other_T2star_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-brnoCeitec04/anat/{sub-brnoCeitec04_space-other_T2w_softseg.json => sub-brnoCeitec04_space-other_T2w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-brnoCeitec04/anat/{sub-brnoCeitec04_space-other_T2w_softseg.nii.gz => sub-brnoCeitec04_space-other_T2w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-brnoCeitec04/dwi/{sub-brnoCeitec04_rec-average_dwi_softseg.json => sub-brnoCeitec04_rec-average_dwi_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-brnoCeitec04/dwi/{sub-brnoCeitec04_rec-average_dwi_softseg.nii.gz => sub-brnoCeitec04_rec-average_dwi_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-brnoCeitec05/anat/{sub-brnoCeitec05_flip-1_mt-on_space-other_MTS_softseg.json => sub-brnoCeitec05_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-brnoCeitec05/anat/{sub-brnoCeitec05_flip-1_mt-on_space-other_MTS_softseg.nii.gz => sub-brnoCeitec05_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-brnoCeitec05/anat/{sub-brnoCeitec05_flip-2_mt-off_space-other_MTS_softseg.json => sub-brnoCeitec05_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-brnoCeitec05/anat/{sub-brnoCeitec05_flip-2_mt-off_space-other_MTS_softseg.nii.gz => sub-brnoCeitec05_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-brnoCeitec05/anat/{sub-brnoCeitec05_space-other_T1w_softseg.json => sub-brnoCeitec05_space-other_T1w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-brnoCeitec05/anat/{sub-brnoCeitec05_space-other_T1w_softseg.nii.gz => sub-brnoCeitec05_space-other_T1w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-brnoCeitec05/anat/{sub-brnoCeitec05_space-other_T2star_softseg.json => sub-brnoCeitec05_space-other_T2star_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-brnoCeitec05/anat/{sub-brnoCeitec05_space-other_T2star_softseg.nii.gz => sub-brnoCeitec05_space-other_T2star_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-brnoCeitec05/anat/{sub-brnoCeitec05_space-other_T2w_softseg.json => sub-brnoCeitec05_space-other_T2w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-brnoCeitec05/anat/{sub-brnoCeitec05_space-other_T2w_softseg.nii.gz => sub-brnoCeitec05_space-other_T2w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-brnoCeitec05/dwi/{sub-brnoCeitec05_rec-average_dwi_softseg.json => sub-brnoCeitec05_rec-average_dwi_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-brnoCeitec05/dwi/{sub-brnoCeitec05_rec-average_dwi_softseg.nii.gz => sub-brnoCeitec05_rec-average_dwi_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-brnoCeitec06/anat/{sub-brnoCeitec06_flip-1_mt-on_space-other_MTS_softseg.json => sub-brnoCeitec06_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-brnoCeitec06/anat/{sub-brnoCeitec06_flip-1_mt-on_space-other_MTS_softseg.nii.gz => sub-brnoCeitec06_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-brnoCeitec06/anat/{sub-brnoCeitec06_flip-2_mt-off_space-other_MTS_softseg.json => sub-brnoCeitec06_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-brnoCeitec06/anat/{sub-brnoCeitec06_flip-2_mt-off_space-other_MTS_softseg.nii.gz => sub-brnoCeitec06_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-brnoCeitec06/anat/{sub-brnoCeitec06_space-other_T1w_softseg.json => sub-brnoCeitec06_space-other_T1w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-brnoCeitec06/anat/{sub-brnoCeitec06_space-other_T1w_softseg.nii.gz => sub-brnoCeitec06_space-other_T1w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-brnoCeitec06/anat/{sub-brnoCeitec06_space-other_T2star_softseg.json => sub-brnoCeitec06_space-other_T2star_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-brnoCeitec06/anat/{sub-brnoCeitec06_space-other_T2star_softseg.nii.gz => sub-brnoCeitec06_space-other_T2star_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-brnoCeitec06/anat/{sub-brnoCeitec06_space-other_T2w_softseg.json => sub-brnoCeitec06_space-other_T2w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-brnoCeitec06/anat/{sub-brnoCeitec06_space-other_T2w_softseg.nii.gz => sub-brnoCeitec06_space-other_T2w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-brnoCeitec06/dwi/{sub-brnoCeitec06_rec-average_dwi_softseg.json => sub-brnoCeitec06_rec-average_dwi_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-brnoCeitec06/dwi/{sub-brnoCeitec06_rec-average_dwi_softseg.nii.gz => sub-brnoCeitec06_rec-average_dwi_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-brnoUhb01/anat/{sub-brnoUhb01_flip-1_mt-on_space-other_MTS_softseg.json => sub-brnoUhb01_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-brnoUhb01/anat/{sub-brnoUhb01_flip-1_mt-on_space-other_MTS_softseg.nii.gz => sub-brnoUhb01_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-brnoUhb01/anat/{sub-brnoUhb01_flip-2_mt-off_space-other_MTS_softseg.json => sub-brnoUhb01_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-brnoUhb01/anat/{sub-brnoUhb01_flip-2_mt-off_space-other_MTS_softseg.nii.gz => sub-brnoUhb01_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-brnoUhb01/anat/{sub-brnoUhb01_space-other_T1w_softseg.json => sub-brnoUhb01_space-other_T1w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-brnoUhb01/anat/{sub-brnoUhb01_space-other_T1w_softseg.nii.gz => sub-brnoUhb01_space-other_T1w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-brnoUhb01/anat/{sub-brnoUhb01_space-other_T2star_softseg.json => sub-brnoUhb01_space-other_T2star_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-brnoUhb01/anat/{sub-brnoUhb01_space-other_T2star_softseg.nii.gz => sub-brnoUhb01_space-other_T2star_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-brnoUhb01/anat/{sub-brnoUhb01_space-other_T2w_softseg.json => sub-brnoUhb01_space-other_T2w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-brnoUhb01/anat/{sub-brnoUhb01_space-other_T2w_softseg.nii.gz => sub-brnoUhb01_space-other_T2w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-brnoUhb01/dwi/{sub-brnoUhb01_rec-average_dwi_softseg.json => sub-brnoUhb01_rec-average_dwi_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-brnoUhb01/dwi/{sub-brnoUhb01_rec-average_dwi_softseg.nii.gz => sub-brnoUhb01_rec-average_dwi_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-brnoUhb04/anat/{sub-brnoUhb04_flip-1_mt-on_space-other_MTS_softseg.json => sub-brnoUhb04_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-brnoUhb04/anat/{sub-brnoUhb04_flip-1_mt-on_space-other_MTS_softseg.nii.gz => sub-brnoUhb04_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-brnoUhb04/anat/{sub-brnoUhb04_flip-2_mt-off_space-other_MTS_softseg.json => sub-brnoUhb04_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-brnoUhb04/anat/{sub-brnoUhb04_flip-2_mt-off_space-other_MTS_softseg.nii.gz => sub-brnoUhb04_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-brnoUhb04/anat/{sub-brnoUhb04_space-other_T1w_softseg.json => sub-brnoUhb04_space-other_T1w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-brnoUhb04/anat/{sub-brnoUhb04_space-other_T1w_softseg.nii.gz => sub-brnoUhb04_space-other_T1w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-brnoUhb04/anat/{sub-brnoUhb04_space-other_T2star_softseg.json => sub-brnoUhb04_space-other_T2star_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-brnoUhb04/anat/{sub-brnoUhb04_space-other_T2star_softseg.nii.gz => sub-brnoUhb04_space-other_T2star_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-brnoUhb04/anat/{sub-brnoUhb04_space-other_T2w_softseg.json => sub-brnoUhb04_space-other_T2w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-brnoUhb04/anat/{sub-brnoUhb04_space-other_T2w_softseg.nii.gz => sub-brnoUhb04_space-other_T2w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-brnoUhb04/dwi/{sub-brnoUhb04_rec-average_dwi_softseg.json => sub-brnoUhb04_rec-average_dwi_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-brnoUhb04/dwi/{sub-brnoUhb04_rec-average_dwi_softseg.nii.gz => sub-brnoUhb04_rec-average_dwi_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-brnoUhb05/anat/{sub-brnoUhb05_flip-1_mt-on_space-other_MTS_softseg.json => sub-brnoUhb05_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-brnoUhb05/anat/{sub-brnoUhb05_flip-1_mt-on_space-other_MTS_softseg.nii.gz => sub-brnoUhb05_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-brnoUhb05/anat/{sub-brnoUhb05_flip-2_mt-off_space-other_MTS_softseg.json => sub-brnoUhb05_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-brnoUhb05/anat/{sub-brnoUhb05_flip-2_mt-off_space-other_MTS_softseg.nii.gz => sub-brnoUhb05_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-brnoUhb05/anat/{sub-brnoUhb05_space-other_T1w_softseg.json => sub-brnoUhb05_space-other_T1w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-brnoUhb05/anat/{sub-brnoUhb05_space-other_T1w_softseg.nii.gz => sub-brnoUhb05_space-other_T1w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-brnoUhb05/anat/{sub-brnoUhb05_space-other_T2star_softseg.json => sub-brnoUhb05_space-other_T2star_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-brnoUhb05/anat/{sub-brnoUhb05_space-other_T2star_softseg.nii.gz => sub-brnoUhb05_space-other_T2star_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-brnoUhb05/anat/{sub-brnoUhb05_space-other_T2w_softseg.json => sub-brnoUhb05_space-other_T2w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-brnoUhb05/anat/{sub-brnoUhb05_space-other_T2w_softseg.nii.gz => sub-brnoUhb05_space-other_T2w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-brnoUhb05/dwi/{sub-brnoUhb05_rec-average_dwi_softseg.json => sub-brnoUhb05_rec-average_dwi_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-brnoUhb05/dwi/{sub-brnoUhb05_rec-average_dwi_softseg.nii.gz => sub-brnoUhb05_rec-average_dwi_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-brnoUhb06/anat/{sub-brnoUhb06_flip-1_mt-on_space-other_MTS_softseg.json => sub-brnoUhb06_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-brnoUhb06/anat/{sub-brnoUhb06_flip-1_mt-on_space-other_MTS_softseg.nii.gz => sub-brnoUhb06_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-brnoUhb06/anat/{sub-brnoUhb06_flip-2_mt-off_space-other_MTS_softseg.json => sub-brnoUhb06_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-brnoUhb06/anat/{sub-brnoUhb06_flip-2_mt-off_space-other_MTS_softseg.nii.gz => sub-brnoUhb06_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-brnoUhb06/anat/{sub-brnoUhb06_space-other_T1w_softseg.json => sub-brnoUhb06_space-other_T1w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-brnoUhb06/anat/{sub-brnoUhb06_space-other_T1w_softseg.nii.gz => sub-brnoUhb06_space-other_T1w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-brnoUhb06/anat/{sub-brnoUhb06_space-other_T2star_softseg.json => sub-brnoUhb06_space-other_T2star_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-brnoUhb06/anat/{sub-brnoUhb06_space-other_T2star_softseg.nii.gz => sub-brnoUhb06_space-other_T2star_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-brnoUhb06/anat/{sub-brnoUhb06_space-other_T2w_softseg.json => sub-brnoUhb06_space-other_T2w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-brnoUhb06/anat/{sub-brnoUhb06_space-other_T2w_softseg.nii.gz => sub-brnoUhb06_space-other_T2w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-brnoUhb06/dwi/{sub-brnoUhb06_rec-average_dwi_softseg.json => sub-brnoUhb06_rec-average_dwi_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-brnoUhb06/dwi/{sub-brnoUhb06_rec-average_dwi_softseg.nii.gz => sub-brnoUhb06_rec-average_dwi_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-cardiff01/anat/{sub-cardiff01_flip-1_mt-on_space-other_MTS_softseg.json => sub-cardiff01_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-cardiff01/anat/{sub-cardiff01_flip-1_mt-on_space-other_MTS_softseg.nii.gz => sub-cardiff01_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-cardiff01/anat/{sub-cardiff01_flip-2_mt-off_space-other_MTS_softseg.json => sub-cardiff01_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-cardiff01/anat/{sub-cardiff01_flip-2_mt-off_space-other_MTS_softseg.nii.gz => sub-cardiff01_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-cardiff01/anat/{sub-cardiff01_space-other_T1w_softseg.json => sub-cardiff01_space-other_T1w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-cardiff01/anat/{sub-cardiff01_space-other_T1w_softseg.nii.gz => sub-cardiff01_space-other_T1w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-cardiff01/anat/{sub-cardiff01_space-other_T2star_softseg.json => sub-cardiff01_space-other_T2star_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-cardiff01/anat/{sub-cardiff01_space-other_T2star_softseg.nii.gz => sub-cardiff01_space-other_T2star_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-cardiff01/anat/{sub-cardiff01_space-other_T2w_softseg.json => sub-cardiff01_space-other_T2w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-cardiff01/anat/{sub-cardiff01_space-other_T2w_softseg.nii.gz => sub-cardiff01_space-other_T2w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-cardiff01/dwi/{sub-cardiff01_rec-average_dwi_softseg.json => sub-cardiff01_rec-average_dwi_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-cardiff01/dwi/{sub-cardiff01_rec-average_dwi_softseg.nii.gz => sub-cardiff01_rec-average_dwi_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-cardiff02/anat/{sub-cardiff02_flip-1_mt-on_space-other_MTS_softseg.json => sub-cardiff02_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-cardiff02/anat/{sub-cardiff02_flip-1_mt-on_space-other_MTS_softseg.nii.gz => sub-cardiff02_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-cardiff02/anat/{sub-cardiff02_flip-2_mt-off_space-other_MTS_softseg.json => sub-cardiff02_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-cardiff02/anat/{sub-cardiff02_flip-2_mt-off_space-other_MTS_softseg.nii.gz => sub-cardiff02_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-cardiff02/anat/{sub-cardiff02_space-other_T1w_softseg.json => sub-cardiff02_space-other_T1w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-cardiff02/anat/{sub-cardiff02_space-other_T1w_softseg.nii.gz => sub-cardiff02_space-other_T1w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-cardiff02/anat/{sub-cardiff02_space-other_T2star_softseg.json => sub-cardiff02_space-other_T2star_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-cardiff02/anat/{sub-cardiff02_space-other_T2star_softseg.nii.gz => sub-cardiff02_space-other_T2star_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-cardiff02/anat/{sub-cardiff02_space-other_T2w_softseg.json => sub-cardiff02_space-other_T2w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-cardiff02/anat/{sub-cardiff02_space-other_T2w_softseg.nii.gz => sub-cardiff02_space-other_T2w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-cardiff02/dwi/{sub-cardiff02_rec-average_dwi_softseg.json => sub-cardiff02_rec-average_dwi_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-cardiff02/dwi/{sub-cardiff02_rec-average_dwi_softseg.nii.gz => sub-cardiff02_rec-average_dwi_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-cardiff03/anat/{sub-cardiff03_flip-1_mt-on_space-other_MTS_softseg.json => sub-cardiff03_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-cardiff03/anat/{sub-cardiff03_flip-1_mt-on_space-other_MTS_softseg.nii.gz => sub-cardiff03_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-cardiff03/anat/{sub-cardiff03_flip-2_mt-off_space-other_MTS_softseg.json => sub-cardiff03_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-cardiff03/anat/{sub-cardiff03_flip-2_mt-off_space-other_MTS_softseg.nii.gz => sub-cardiff03_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-cardiff03/anat/{sub-cardiff03_space-other_T1w_softseg.json => sub-cardiff03_space-other_T1w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-cardiff03/anat/{sub-cardiff03_space-other_T1w_softseg.nii.gz => sub-cardiff03_space-other_T1w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-cardiff03/anat/{sub-cardiff03_space-other_T2star_softseg.json => sub-cardiff03_space-other_T2star_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-cardiff03/anat/{sub-cardiff03_space-other_T2star_softseg.nii.gz => sub-cardiff03_space-other_T2star_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-cardiff03/anat/{sub-cardiff03_space-other_T2w_softseg.json => sub-cardiff03_space-other_T2w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-cardiff03/anat/{sub-cardiff03_space-other_T2w_softseg.nii.gz => sub-cardiff03_space-other_T2w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-cardiff03/dwi/{sub-cardiff03_rec-average_dwi_softseg.json => sub-cardiff03_rec-average_dwi_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-cardiff03/dwi/{sub-cardiff03_rec-average_dwi_softseg.nii.gz => sub-cardiff03_rec-average_dwi_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-cardiff04/anat/{sub-cardiff04_flip-1_mt-on_space-other_MTS_softseg.json => sub-cardiff04_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-cardiff04/anat/{sub-cardiff04_flip-1_mt-on_space-other_MTS_softseg.nii.gz => sub-cardiff04_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-cardiff04/anat/{sub-cardiff04_flip-2_mt-off_space-other_MTS_softseg.json => sub-cardiff04_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-cardiff04/anat/{sub-cardiff04_flip-2_mt-off_space-other_MTS_softseg.nii.gz => sub-cardiff04_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-cardiff04/anat/{sub-cardiff04_space-other_T1w_softseg.json => sub-cardiff04_space-other_T1w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-cardiff04/anat/{sub-cardiff04_space-other_T1w_softseg.nii.gz => sub-cardiff04_space-other_T1w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-cardiff04/anat/{sub-cardiff04_space-other_T2star_softseg.json => sub-cardiff04_space-other_T2star_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-cardiff04/anat/{sub-cardiff04_space-other_T2star_softseg.nii.gz => sub-cardiff04_space-other_T2star_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-cardiff04/anat/{sub-cardiff04_space-other_T2w_softseg.json => sub-cardiff04_space-other_T2w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-cardiff04/anat/{sub-cardiff04_space-other_T2w_softseg.nii.gz => sub-cardiff04_space-other_T2w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-cardiff04/dwi/{sub-cardiff04_rec-average_dwi_softseg.json => sub-cardiff04_rec-average_dwi_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-cardiff04/dwi/{sub-cardiff04_rec-average_dwi_softseg.nii.gz => sub-cardiff04_rec-average_dwi_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-cardiff05/anat/{sub-cardiff05_flip-1_mt-on_space-other_MTS_softseg.json => sub-cardiff05_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-cardiff05/anat/{sub-cardiff05_flip-1_mt-on_space-other_MTS_softseg.nii.gz => sub-cardiff05_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-cardiff05/anat/{sub-cardiff05_flip-2_mt-off_space-other_MTS_softseg.json => sub-cardiff05_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-cardiff05/anat/{sub-cardiff05_flip-2_mt-off_space-other_MTS_softseg.nii.gz => sub-cardiff05_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-cardiff05/anat/{sub-cardiff05_space-other_T1w_softseg.json => sub-cardiff05_space-other_T1w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-cardiff05/anat/{sub-cardiff05_space-other_T1w_softseg.nii.gz => sub-cardiff05_space-other_T1w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-cardiff05/anat/{sub-cardiff05_space-other_T2star_softseg.json => sub-cardiff05_space-other_T2star_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-cardiff05/anat/{sub-cardiff05_space-other_T2star_softseg.nii.gz => sub-cardiff05_space-other_T2star_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-cardiff05/anat/{sub-cardiff05_space-other_T2w_softseg.json => sub-cardiff05_space-other_T2w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-cardiff05/anat/{sub-cardiff05_space-other_T2w_softseg.nii.gz => sub-cardiff05_space-other_T2w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-cardiff05/dwi/{sub-cardiff05_rec-average_dwi_softseg.json => sub-cardiff05_rec-average_dwi_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-cardiff05/dwi/{sub-cardiff05_rec-average_dwi_softseg.nii.gz => sub-cardiff05_rec-average_dwi_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-cardiff06/anat/{sub-cardiff06_flip-1_mt-on_space-other_MTS_softseg.json => sub-cardiff06_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-cardiff06/anat/{sub-cardiff06_flip-1_mt-on_space-other_MTS_softseg.nii.gz => sub-cardiff06_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-cardiff06/anat/{sub-cardiff06_flip-2_mt-off_space-other_MTS_softseg.json => sub-cardiff06_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-cardiff06/anat/{sub-cardiff06_flip-2_mt-off_space-other_MTS_softseg.nii.gz => sub-cardiff06_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-cardiff06/anat/{sub-cardiff06_space-other_T1w_softseg.json => sub-cardiff06_space-other_T1w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-cardiff06/anat/{sub-cardiff06_space-other_T1w_softseg.nii.gz => sub-cardiff06_space-other_T1w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-cardiff06/anat/{sub-cardiff06_space-other_T2star_softseg.json => sub-cardiff06_space-other_T2star_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-cardiff06/anat/{sub-cardiff06_space-other_T2star_softseg.nii.gz => sub-cardiff06_space-other_T2star_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-cardiff06/anat/{sub-cardiff06_space-other_T2w_softseg.json => sub-cardiff06_space-other_T2w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-cardiff06/anat/{sub-cardiff06_space-other_T2w_softseg.nii.gz => sub-cardiff06_space-other_T2w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-cardiff06/dwi/{sub-cardiff06_rec-average_dwi_softseg.json => sub-cardiff06_rec-average_dwi_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-cardiff06/dwi/{sub-cardiff06_rec-average_dwi_softseg.nii.gz => sub-cardiff06_rec-average_dwi_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-cmrra01/anat/{sub-cmrra01_flip-1_mt-on_space-other_MTS_softseg.json => sub-cmrra01_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-cmrra01/anat/{sub-cmrra01_flip-1_mt-on_space-other_MTS_softseg.nii.gz => sub-cmrra01_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-cmrra01/anat/{sub-cmrra01_flip-2_mt-off_space-other_MTS_softseg.json => sub-cmrra01_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-cmrra01/anat/{sub-cmrra01_flip-2_mt-off_space-other_MTS_softseg.nii.gz => sub-cmrra01_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-cmrra01/anat/{sub-cmrra01_space-other_T1w_softseg.json => sub-cmrra01_space-other_T1w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-cmrra01/anat/{sub-cmrra01_space-other_T1w_softseg.nii.gz => sub-cmrra01_space-other_T1w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-cmrra01/anat/{sub-cmrra01_space-other_T2star_softseg.json => sub-cmrra01_space-other_T2star_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-cmrra01/anat/{sub-cmrra01_space-other_T2star_softseg.nii.gz => sub-cmrra01_space-other_T2star_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-cmrra01/anat/{sub-cmrra01_space-other_T2w_softseg.json => sub-cmrra01_space-other_T2w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-cmrra01/anat/{sub-cmrra01_space-other_T2w_softseg.nii.gz => sub-cmrra01_space-other_T2w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-cmrra01/dwi/{sub-cmrra01_rec-average_dwi_softseg.json => sub-cmrra01_rec-average_dwi_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-cmrra01/dwi/{sub-cmrra01_rec-average_dwi_softseg.nii.gz => sub-cmrra01_rec-average_dwi_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-cmrra02/anat/{sub-cmrra02_flip-1_mt-on_space-other_MTS_softseg.json => sub-cmrra02_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-cmrra02/anat/{sub-cmrra02_flip-1_mt-on_space-other_MTS_softseg.nii.gz => sub-cmrra02_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-cmrra02/anat/{sub-cmrra02_flip-2_mt-off_space-other_MTS_softseg.json => sub-cmrra02_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-cmrra02/anat/{sub-cmrra02_flip-2_mt-off_space-other_MTS_softseg.nii.gz => sub-cmrra02_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-cmrra02/anat/{sub-cmrra02_space-other_T1w_softseg.json => sub-cmrra02_space-other_T1w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-cmrra02/anat/{sub-cmrra02_space-other_T1w_softseg.nii.gz => sub-cmrra02_space-other_T1w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-cmrra02/anat/{sub-cmrra02_space-other_T2star_softseg.json => sub-cmrra02_space-other_T2star_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-cmrra02/anat/{sub-cmrra02_space-other_T2star_softseg.nii.gz => sub-cmrra02_space-other_T2star_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-cmrra02/anat/{sub-cmrra02_space-other_T2w_softseg.json => sub-cmrra02_space-other_T2w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-cmrra02/anat/{sub-cmrra02_space-other_T2w_softseg.nii.gz => sub-cmrra02_space-other_T2w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-cmrra02/dwi/{sub-cmrra02_rec-average_dwi_softseg.json => sub-cmrra02_rec-average_dwi_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-cmrra02/dwi/{sub-cmrra02_rec-average_dwi_softseg.nii.gz => sub-cmrra02_rec-average_dwi_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-cmrra03/anat/{sub-cmrra03_flip-1_mt-on_space-other_MTS_softseg.json => sub-cmrra03_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-cmrra03/anat/{sub-cmrra03_flip-1_mt-on_space-other_MTS_softseg.nii.gz => sub-cmrra03_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-cmrra03/anat/{sub-cmrra03_flip-2_mt-off_space-other_MTS_softseg.json => sub-cmrra03_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-cmrra03/anat/{sub-cmrra03_flip-2_mt-off_space-other_MTS_softseg.nii.gz => sub-cmrra03_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-cmrra03/anat/{sub-cmrra03_space-other_T1w_softseg.json => sub-cmrra03_space-other_T1w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-cmrra03/anat/{sub-cmrra03_space-other_T1w_softseg.nii.gz => sub-cmrra03_space-other_T1w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-cmrra03/anat/{sub-cmrra03_space-other_T2star_softseg.json => sub-cmrra03_space-other_T2star_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-cmrra03/anat/{sub-cmrra03_space-other_T2star_softseg.nii.gz => sub-cmrra03_space-other_T2star_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-cmrra03/anat/{sub-cmrra03_space-other_T2w_softseg.json => sub-cmrra03_space-other_T2w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-cmrra03/anat/{sub-cmrra03_space-other_T2w_softseg.nii.gz => sub-cmrra03_space-other_T2w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-cmrra03/dwi/{sub-cmrra03_rec-average_dwi_softseg.json => sub-cmrra03_rec-average_dwi_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-cmrra03/dwi/{sub-cmrra03_rec-average_dwi_softseg.nii.gz => sub-cmrra03_rec-average_dwi_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-cmrra04/anat/{sub-cmrra04_flip-1_mt-on_space-other_MTS_softseg.json => sub-cmrra04_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-cmrra04/anat/{sub-cmrra04_flip-1_mt-on_space-other_MTS_softseg.nii.gz => sub-cmrra04_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-cmrra04/anat/{sub-cmrra04_flip-2_mt-off_space-other_MTS_softseg.json => sub-cmrra04_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-cmrra04/anat/{sub-cmrra04_flip-2_mt-off_space-other_MTS_softseg.nii.gz => sub-cmrra04_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-cmrra04/anat/{sub-cmrra04_space-other_T1w_softseg.json => sub-cmrra04_space-other_T1w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-cmrra04/anat/{sub-cmrra04_space-other_T1w_softseg.nii.gz => sub-cmrra04_space-other_T1w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-cmrra04/anat/{sub-cmrra04_space-other_T2star_softseg.json => sub-cmrra04_space-other_T2star_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-cmrra04/anat/{sub-cmrra04_space-other_T2star_softseg.nii.gz => sub-cmrra04_space-other_T2star_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-cmrra04/anat/{sub-cmrra04_space-other_T2w_softseg.json => sub-cmrra04_space-other_T2w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-cmrra04/anat/{sub-cmrra04_space-other_T2w_softseg.nii.gz => sub-cmrra04_space-other_T2w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-cmrra04/dwi/{sub-cmrra04_rec-average_dwi_softseg.json => sub-cmrra04_rec-average_dwi_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-cmrra04/dwi/{sub-cmrra04_rec-average_dwi_softseg.nii.gz => sub-cmrra04_rec-average_dwi_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-cmrra05/anat/{sub-cmrra05_flip-1_mt-on_space-other_MTS_softseg.json => sub-cmrra05_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-cmrra05/anat/{sub-cmrra05_flip-1_mt-on_space-other_MTS_softseg.nii.gz => sub-cmrra05_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-cmrra05/anat/{sub-cmrra05_flip-2_mt-off_space-other_MTS_softseg.json => sub-cmrra05_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-cmrra05/anat/{sub-cmrra05_flip-2_mt-off_space-other_MTS_softseg.nii.gz => sub-cmrra05_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-cmrra05/anat/{sub-cmrra05_space-other_T1w_softseg.json => sub-cmrra05_space-other_T1w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-cmrra05/anat/{sub-cmrra05_space-other_T1w_softseg.nii.gz => sub-cmrra05_space-other_T1w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-cmrra05/anat/{sub-cmrra05_space-other_T2star_softseg.json => sub-cmrra05_space-other_T2star_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-cmrra05/anat/{sub-cmrra05_space-other_T2star_softseg.nii.gz => sub-cmrra05_space-other_T2star_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-cmrra05/anat/{sub-cmrra05_space-other_T2w_softseg.json => sub-cmrra05_space-other_T2w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-cmrra05/anat/{sub-cmrra05_space-other_T2w_softseg.nii.gz => sub-cmrra05_space-other_T2w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-cmrra05/dwi/{sub-cmrra05_rec-average_dwi_softseg.json => sub-cmrra05_rec-average_dwi_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-cmrra05/dwi/{sub-cmrra05_rec-average_dwi_softseg.nii.gz => sub-cmrra05_rec-average_dwi_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-cmrra06/anat/{sub-cmrra06_flip-1_mt-on_space-other_MTS_softseg.json => sub-cmrra06_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-cmrra06/anat/{sub-cmrra06_flip-1_mt-on_space-other_MTS_softseg.nii.gz => sub-cmrra06_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-cmrra06/anat/{sub-cmrra06_flip-2_mt-off_space-other_MTS_softseg.json => sub-cmrra06_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-cmrra06/anat/{sub-cmrra06_flip-2_mt-off_space-other_MTS_softseg.nii.gz => sub-cmrra06_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-cmrra06/anat/{sub-cmrra06_space-other_T1w_softseg.json => sub-cmrra06_space-other_T1w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-cmrra06/anat/{sub-cmrra06_space-other_T1w_softseg.nii.gz => sub-cmrra06_space-other_T1w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-cmrra06/anat/{sub-cmrra06_space-other_T2star_softseg.json => sub-cmrra06_space-other_T2star_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-cmrra06/anat/{sub-cmrra06_space-other_T2star_softseg.nii.gz => sub-cmrra06_space-other_T2star_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-cmrra06/anat/{sub-cmrra06_space-other_T2w_softseg.json => sub-cmrra06_space-other_T2w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-cmrra06/anat/{sub-cmrra06_space-other_T2w_softseg.nii.gz => sub-cmrra06_space-other_T2w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-cmrra06/dwi/{sub-cmrra06_rec-average_dwi_softseg.json => sub-cmrra06_rec-average_dwi_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-cmrra06/dwi/{sub-cmrra06_rec-average_dwi_softseg.nii.gz => sub-cmrra06_rec-average_dwi_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-cmrrb01/anat/{sub-cmrrb01_flip-1_mt-on_space-other_MTS_softseg.json => sub-cmrrb01_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-cmrrb01/anat/{sub-cmrrb01_flip-1_mt-on_space-other_MTS_softseg.nii.gz => sub-cmrrb01_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-cmrrb01/anat/{sub-cmrrb01_flip-2_mt-off_space-other_MTS_softseg.json => sub-cmrrb01_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-cmrrb01/anat/{sub-cmrrb01_flip-2_mt-off_space-other_MTS_softseg.nii.gz => sub-cmrrb01_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-cmrrb01/anat/{sub-cmrrb01_space-other_T1w_softseg.json => sub-cmrrb01_space-other_T1w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-cmrrb01/anat/{sub-cmrrb01_space-other_T1w_softseg.nii.gz => sub-cmrrb01_space-other_T1w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-cmrrb01/anat/{sub-cmrrb01_space-other_T2star_softseg.json => sub-cmrrb01_space-other_T2star_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-cmrrb01/anat/{sub-cmrrb01_space-other_T2star_softseg.nii.gz => sub-cmrrb01_space-other_T2star_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-cmrrb01/anat/{sub-cmrrb01_space-other_T2w_softseg.json => sub-cmrrb01_space-other_T2w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-cmrrb01/anat/{sub-cmrrb01_space-other_T2w_softseg.nii.gz => sub-cmrrb01_space-other_T2w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-cmrrb01/dwi/{sub-cmrrb01_rec-average_dwi_softseg.json => sub-cmrrb01_rec-average_dwi_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-cmrrb01/dwi/{sub-cmrrb01_rec-average_dwi_softseg.nii.gz => sub-cmrrb01_rec-average_dwi_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-cmrrb02/anat/{sub-cmrrb02_flip-1_mt-on_space-other_MTS_softseg.json => sub-cmrrb02_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-cmrrb02/anat/{sub-cmrrb02_flip-1_mt-on_space-other_MTS_softseg.nii.gz => sub-cmrrb02_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-cmrrb02/anat/{sub-cmrrb02_flip-2_mt-off_space-other_MTS_softseg.json => sub-cmrrb02_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-cmrrb02/anat/{sub-cmrrb02_flip-2_mt-off_space-other_MTS_softseg.nii.gz => sub-cmrrb02_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-cmrrb02/anat/{sub-cmrrb02_space-other_T1w_softseg.json => sub-cmrrb02_space-other_T1w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-cmrrb02/anat/{sub-cmrrb02_space-other_T1w_softseg.nii.gz => sub-cmrrb02_space-other_T1w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-cmrrb02/anat/{sub-cmrrb02_space-other_T2star_softseg.json => sub-cmrrb02_space-other_T2star_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-cmrrb02/anat/{sub-cmrrb02_space-other_T2star_softseg.nii.gz => sub-cmrrb02_space-other_T2star_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-cmrrb02/anat/{sub-cmrrb02_space-other_T2w_softseg.json => sub-cmrrb02_space-other_T2w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-cmrrb02/anat/{sub-cmrrb02_space-other_T2w_softseg.nii.gz => sub-cmrrb02_space-other_T2w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-cmrrb02/dwi/{sub-cmrrb02_rec-average_dwi_softseg.json => sub-cmrrb02_rec-average_dwi_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-cmrrb02/dwi/{sub-cmrrb02_rec-average_dwi_softseg.nii.gz => sub-cmrrb02_rec-average_dwi_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-cmrrb03/anat/{sub-cmrrb03_flip-1_mt-on_space-other_MTS_softseg.json => sub-cmrrb03_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-cmrrb03/anat/{sub-cmrrb03_flip-1_mt-on_space-other_MTS_softseg.nii.gz => sub-cmrrb03_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-cmrrb03/anat/{sub-cmrrb03_flip-2_mt-off_space-other_MTS_softseg.json => sub-cmrrb03_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-cmrrb03/anat/{sub-cmrrb03_flip-2_mt-off_space-other_MTS_softseg.nii.gz => sub-cmrrb03_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-cmrrb03/anat/{sub-cmrrb03_space-other_T1w_softseg.json => sub-cmrrb03_space-other_T1w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-cmrrb03/anat/{sub-cmrrb03_space-other_T1w_softseg.nii.gz => sub-cmrrb03_space-other_T1w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-cmrrb03/anat/{sub-cmrrb03_space-other_T2star_softseg.json => sub-cmrrb03_space-other_T2star_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-cmrrb03/anat/{sub-cmrrb03_space-other_T2star_softseg.nii.gz => sub-cmrrb03_space-other_T2star_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-cmrrb03/anat/{sub-cmrrb03_space-other_T2w_softseg.json => sub-cmrrb03_space-other_T2w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-cmrrb03/anat/{sub-cmrrb03_space-other_T2w_softseg.nii.gz => sub-cmrrb03_space-other_T2w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-cmrrb03/dwi/{sub-cmrrb03_rec-average_dwi_softseg.json => sub-cmrrb03_rec-average_dwi_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-cmrrb03/dwi/{sub-cmrrb03_rec-average_dwi_softseg.nii.gz => sub-cmrrb03_rec-average_dwi_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-cmrrb04/anat/{sub-cmrrb04_flip-1_mt-on_space-other_MTS_softseg.json => sub-cmrrb04_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-cmrrb04/anat/{sub-cmrrb04_flip-1_mt-on_space-other_MTS_softseg.nii.gz => sub-cmrrb04_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-cmrrb04/anat/{sub-cmrrb04_flip-2_mt-off_space-other_MTS_softseg.json => sub-cmrrb04_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-cmrrb04/anat/{sub-cmrrb04_flip-2_mt-off_space-other_MTS_softseg.nii.gz => sub-cmrrb04_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-cmrrb04/anat/{sub-cmrrb04_space-other_T1w_softseg.json => sub-cmrrb04_space-other_T1w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-cmrrb04/anat/{sub-cmrrb04_space-other_T1w_softseg.nii.gz => sub-cmrrb04_space-other_T1w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-cmrrb04/anat/{sub-cmrrb04_space-other_T2star_softseg.json => sub-cmrrb04_space-other_T2star_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-cmrrb04/anat/{sub-cmrrb04_space-other_T2star_softseg.nii.gz => sub-cmrrb04_space-other_T2star_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-cmrrb04/anat/{sub-cmrrb04_space-other_T2w_softseg.json => sub-cmrrb04_space-other_T2w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-cmrrb04/anat/{sub-cmrrb04_space-other_T2w_softseg.nii.gz => sub-cmrrb04_space-other_T2w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-cmrrb04/dwi/{sub-cmrrb04_rec-average_dwi_softseg.json => sub-cmrrb04_rec-average_dwi_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-cmrrb04/dwi/{sub-cmrrb04_rec-average_dwi_softseg.nii.gz => sub-cmrrb04_rec-average_dwi_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-cmrrb05/anat/{sub-cmrrb05_flip-1_mt-on_space-other_MTS_softseg.json => sub-cmrrb05_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-cmrrb05/anat/{sub-cmrrb05_flip-1_mt-on_space-other_MTS_softseg.nii.gz => sub-cmrrb05_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-cmrrb05/anat/{sub-cmrrb05_flip-2_mt-off_space-other_MTS_softseg.json => sub-cmrrb05_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-cmrrb05/anat/{sub-cmrrb05_flip-2_mt-off_space-other_MTS_softseg.nii.gz => sub-cmrrb05_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-cmrrb05/anat/{sub-cmrrb05_space-other_T1w_softseg.json => sub-cmrrb05_space-other_T1w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-cmrrb05/anat/{sub-cmrrb05_space-other_T1w_softseg.nii.gz => sub-cmrrb05_space-other_T1w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-cmrrb05/anat/{sub-cmrrb05_space-other_T2star_softseg.json => sub-cmrrb05_space-other_T2star_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-cmrrb05/anat/{sub-cmrrb05_space-other_T2star_softseg.nii.gz => sub-cmrrb05_space-other_T2star_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-cmrrb05/anat/{sub-cmrrb05_space-other_T2w_softseg.json => sub-cmrrb05_space-other_T2w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-cmrrb05/anat/{sub-cmrrb05_space-other_T2w_softseg.nii.gz => sub-cmrrb05_space-other_T2w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-cmrrb05/dwi/{sub-cmrrb05_rec-average_dwi_softseg.json => sub-cmrrb05_rec-average_dwi_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-cmrrb05/dwi/{sub-cmrrb05_rec-average_dwi_softseg.nii.gz => sub-cmrrb05_rec-average_dwi_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-cmrrb06/anat/{sub-cmrrb06_flip-1_mt-on_space-other_MTS_softseg.json => sub-cmrrb06_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-cmrrb06/anat/{sub-cmrrb06_flip-1_mt-on_space-other_MTS_softseg.nii.gz => sub-cmrrb06_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-cmrrb06/anat/{sub-cmrrb06_flip-2_mt-off_space-other_MTS_softseg.json => sub-cmrrb06_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-cmrrb06/anat/{sub-cmrrb06_flip-2_mt-off_space-other_MTS_softseg.nii.gz => sub-cmrrb06_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-cmrrb06/anat/{sub-cmrrb06_space-other_T1w_softseg.json => sub-cmrrb06_space-other_T1w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-cmrrb06/anat/{sub-cmrrb06_space-other_T1w_softseg.nii.gz => sub-cmrrb06_space-other_T1w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-cmrrb06/anat/{sub-cmrrb06_space-other_T2star_softseg.json => sub-cmrrb06_space-other_T2star_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-cmrrb06/anat/{sub-cmrrb06_space-other_T2star_softseg.nii.gz => sub-cmrrb06_space-other_T2star_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-cmrrb06/anat/{sub-cmrrb06_space-other_T2w_softseg.json => sub-cmrrb06_space-other_T2w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-cmrrb06/anat/{sub-cmrrb06_space-other_T2w_softseg.nii.gz => sub-cmrrb06_space-other_T2w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-cmrrb06/dwi/{sub-cmrrb06_rec-average_dwi_softseg.json => sub-cmrrb06_rec-average_dwi_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-cmrrb06/dwi/{sub-cmrrb06_rec-average_dwi_softseg.nii.gz => sub-cmrrb06_rec-average_dwi_label-SC_softseg.nii.gz} 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sub-cmrrb07_space-other_T1w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-cmrrb07/anat/{sub-cmrrb07_space-other_T2star_softseg.json => sub-cmrrb07_space-other_T2star_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-cmrrb07/anat/{sub-cmrrb07_space-other_T2star_softseg.nii.gz => sub-cmrrb07_space-other_T2star_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-cmrrb07/anat/{sub-cmrrb07_space-other_T2w_softseg.json => sub-cmrrb07_space-other_T2w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-cmrrb07/anat/{sub-cmrrb07_space-other_T2w_softseg.nii.gz => sub-cmrrb07_space-other_T2w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-cmrrb07/dwi/{sub-cmrrb07_rec-average_dwi_softseg.json => sub-cmrrb07_rec-average_dwi_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-cmrrb07/dwi/{sub-cmrrb07_rec-average_dwi_softseg.nii.gz => sub-cmrrb07_rec-average_dwi_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-dresden01/anat/{sub-dresden01_flip-1_mt-on_space-other_MTS_softseg.json => sub-dresden01_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-dresden01/anat/{sub-dresden01_flip-1_mt-on_space-other_MTS_softseg.nii.gz => sub-dresden01_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-dresden01/anat/{sub-dresden01_flip-2_mt-off_space-other_MTS_softseg.json => sub-dresden01_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-dresden01/anat/{sub-dresden01_flip-2_mt-off_space-other_MTS_softseg.nii.gz => sub-dresden01_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-dresden01/anat/{sub-dresden01_space-other_T1w_softseg.json => sub-dresden01_space-other_T1w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-dresden01/anat/{sub-dresden01_space-other_T1w_softseg.nii.gz => sub-dresden01_space-other_T1w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-dresden01/anat/{sub-dresden01_space-other_T2star_softseg.json => sub-dresden01_space-other_T2star_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-dresden01/anat/{sub-dresden01_space-other_T2star_softseg.nii.gz => sub-dresden01_space-other_T2star_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-dresden01/anat/{sub-dresden01_space-other_T2w_softseg.json => sub-dresden01_space-other_T2w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-dresden01/anat/{sub-dresden01_space-other_T2w_softseg.nii.gz => sub-dresden01_space-other_T2w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-dresden01/dwi/{sub-dresden01_rec-average_dwi_softseg.json => sub-dresden01_rec-average_dwi_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-dresden01/dwi/{sub-dresden01_rec-average_dwi_softseg.nii.gz => sub-dresden01_rec-average_dwi_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-dresden02/anat/{sub-dresden02_flip-1_mt-on_space-other_MTS_softseg.json => sub-dresden02_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-dresden02/anat/{sub-dresden02_flip-1_mt-on_space-other_MTS_softseg.nii.gz => sub-dresden02_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-dresden02/anat/{sub-dresden02_flip-2_mt-off_space-other_MTS_softseg.json => sub-dresden02_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-dresden02/anat/{sub-dresden02_flip-2_mt-off_space-other_MTS_softseg.nii.gz => sub-dresden02_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-dresden02/anat/{sub-dresden02_space-other_T1w_softseg.json => sub-dresden02_space-other_T1w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-dresden02/anat/{sub-dresden02_space-other_T1w_softseg.nii.gz => sub-dresden02_space-other_T1w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-dresden02/anat/{sub-dresden02_space-other_T2star_softseg.json => sub-dresden02_space-other_T2star_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-dresden02/anat/{sub-dresden02_space-other_T2star_softseg.nii.gz => sub-dresden02_space-other_T2star_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-dresden02/anat/{sub-dresden02_space-other_T2w_softseg.json => sub-dresden02_space-other_T2w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-dresden02/anat/{sub-dresden02_space-other_T2w_softseg.nii.gz => sub-dresden02_space-other_T2w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-dresden02/dwi/{sub-dresden02_rec-average_dwi_softseg.json => sub-dresden02_rec-average_dwi_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-dresden02/dwi/{sub-dresden02_rec-average_dwi_softseg.nii.gz => sub-dresden02_rec-average_dwi_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-fslAchieva01/anat/{sub-fslAchieva01_flip-1_mt-on_space-other_MTS_softseg.json => sub-fslAchieva01_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-fslAchieva01/anat/{sub-fslAchieva01_flip-1_mt-on_space-other_MTS_softseg.nii.gz => sub-fslAchieva01_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-fslAchieva01/anat/{sub-fslAchieva01_flip-2_mt-off_space-other_MTS_softseg.json => sub-fslAchieva01_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-fslAchieva01/anat/{sub-fslAchieva01_flip-2_mt-off_space-other_MTS_softseg.nii.gz => sub-fslAchieva01_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-fslAchieva01/anat/{sub-fslAchieva01_space-other_T1w_softseg.json => sub-fslAchieva01_space-other_T1w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-fslAchieva01/anat/{sub-fslAchieva01_space-other_T1w_softseg.nii.gz => sub-fslAchieva01_space-other_T1w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-fslAchieva01/anat/{sub-fslAchieva01_space-other_T2star_softseg.json => sub-fslAchieva01_space-other_T2star_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-fslAchieva01/anat/{sub-fslAchieva01_space-other_T2star_softseg.nii.gz => sub-fslAchieva01_space-other_T2star_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-fslAchieva01/anat/{sub-fslAchieva01_space-other_T2w_softseg.json => sub-fslAchieva01_space-other_T2w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-fslAchieva01/anat/{sub-fslAchieva01_space-other_T2w_softseg.nii.gz => sub-fslAchieva01_space-other_T2w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-fslAchieva01/dwi/{sub-fslAchieva01_rec-average_dwi_softseg.json => sub-fslAchieva01_rec-average_dwi_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-fslAchieva01/dwi/{sub-fslAchieva01_rec-average_dwi_softseg.nii.gz => sub-fslAchieva01_rec-average_dwi_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-fslAchieva02/anat/{sub-fslAchieva02_flip-1_mt-on_space-other_MTS_softseg.json => sub-fslAchieva02_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-fslAchieva02/anat/{sub-fslAchieva02_flip-1_mt-on_space-other_MTS_softseg.nii.gz => sub-fslAchieva02_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-fslAchieva02/anat/{sub-fslAchieva02_flip-2_mt-off_space-other_MTS_softseg.json => sub-fslAchieva02_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-fslAchieva02/anat/{sub-fslAchieva02_flip-2_mt-off_space-other_MTS_softseg.nii.gz => sub-fslAchieva02_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-fslAchieva02/anat/{sub-fslAchieva02_space-other_T1w_softseg.json => sub-fslAchieva02_space-other_T1w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-fslAchieva02/anat/{sub-fslAchieva02_space-other_T1w_softseg.nii.gz => sub-fslAchieva02_space-other_T1w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-fslAchieva02/anat/{sub-fslAchieva02_space-other_T2star_softseg.json => sub-fslAchieva02_space-other_T2star_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-fslAchieva02/anat/{sub-fslAchieva02_space-other_T2star_softseg.nii.gz => sub-fslAchieva02_space-other_T2star_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-fslAchieva02/anat/{sub-fslAchieva02_space-other_T2w_softseg.json => sub-fslAchieva02_space-other_T2w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-fslAchieva02/anat/{sub-fslAchieva02_space-other_T2w_softseg.nii.gz => sub-fslAchieva02_space-other_T2w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-fslAchieva02/dwi/{sub-fslAchieva02_rec-average_dwi_softseg.json => sub-fslAchieva02_rec-average_dwi_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-fslAchieva02/dwi/{sub-fslAchieva02_rec-average_dwi_softseg.nii.gz => sub-fslAchieva02_rec-average_dwi_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-fslAchieva03/anat/{sub-fslAchieva03_flip-1_mt-on_space-other_MTS_softseg.json => sub-fslAchieva03_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-fslAchieva03/anat/{sub-fslAchieva03_flip-1_mt-on_space-other_MTS_softseg.nii.gz => sub-fslAchieva03_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-fslAchieva03/anat/{sub-fslAchieva03_flip-2_mt-off_space-other_MTS_softseg.json => sub-fslAchieva03_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-fslAchieva03/anat/{sub-fslAchieva03_flip-2_mt-off_space-other_MTS_softseg.nii.gz => sub-fslAchieva03_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-fslAchieva03/anat/{sub-fslAchieva03_space-other_T1w_softseg.json => sub-fslAchieva03_space-other_T1w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-fslAchieva03/anat/{sub-fslAchieva03_space-other_T1w_softseg.nii.gz => sub-fslAchieva03_space-other_T1w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-fslAchieva03/anat/{sub-fslAchieva03_space-other_T2star_softseg.json => sub-fslAchieva03_space-other_T2star_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-fslAchieva03/anat/{sub-fslAchieva03_space-other_T2star_softseg.nii.gz => sub-fslAchieva03_space-other_T2star_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-fslAchieva03/anat/{sub-fslAchieva03_space-other_T2w_softseg.json => sub-fslAchieva03_space-other_T2w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-fslAchieva03/anat/{sub-fslAchieva03_space-other_T2w_softseg.nii.gz => sub-fslAchieva03_space-other_T2w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-fslAchieva03/dwi/{sub-fslAchieva03_rec-average_dwi_softseg.json => sub-fslAchieva03_rec-average_dwi_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-fslAchieva03/dwi/{sub-fslAchieva03_rec-average_dwi_softseg.nii.gz => sub-fslAchieva03_rec-average_dwi_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-fslAchieva04/anat/{sub-fslAchieva04_flip-1_mt-on_space-other_MTS_softseg.json => sub-fslAchieva04_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-fslAchieva04/anat/{sub-fslAchieva04_flip-1_mt-on_space-other_MTS_softseg.nii.gz => sub-fslAchieva04_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-fslAchieva04/anat/{sub-fslAchieva04_flip-2_mt-off_space-other_MTS_softseg.json => sub-fslAchieva04_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-fslAchieva04/anat/{sub-fslAchieva04_flip-2_mt-off_space-other_MTS_softseg.nii.gz => sub-fslAchieva04_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-fslAchieva04/anat/{sub-fslAchieva04_space-other_T1w_softseg.json => sub-fslAchieva04_space-other_T1w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-fslAchieva04/anat/{sub-fslAchieva04_space-other_T1w_softseg.nii.gz => sub-fslAchieva04_space-other_T1w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-fslAchieva04/anat/{sub-fslAchieva04_space-other_T2star_softseg.json => sub-fslAchieva04_space-other_T2star_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-fslAchieva04/anat/{sub-fslAchieva04_space-other_T2star_softseg.nii.gz => sub-fslAchieva04_space-other_T2star_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-fslAchieva04/anat/{sub-fslAchieva04_space-other_T2w_softseg.json => sub-fslAchieva04_space-other_T2w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-fslAchieva04/anat/{sub-fslAchieva04_space-other_T2w_softseg.nii.gz => sub-fslAchieva04_space-other_T2w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-fslAchieva04/dwi/{sub-fslAchieva04_rec-average_dwi_softseg.json => sub-fslAchieva04_rec-average_dwi_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-fslAchieva04/dwi/{sub-fslAchieva04_rec-average_dwi_softseg.nii.gz => sub-fslAchieva04_rec-average_dwi_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-fslAchieva05/anat/{sub-fslAchieva05_flip-1_mt-on_space-other_MTS_softseg.json => sub-fslAchieva05_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-fslAchieva05/anat/{sub-fslAchieva05_flip-1_mt-on_space-other_MTS_softseg.nii.gz => sub-fslAchieva05_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-fslAchieva05/anat/{sub-fslAchieva05_flip-2_mt-off_space-other_MTS_softseg.json => sub-fslAchieva05_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-fslAchieva05/anat/{sub-fslAchieva05_flip-2_mt-off_space-other_MTS_softseg.nii.gz => sub-fslAchieva05_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-fslAchieva05/anat/{sub-fslAchieva05_space-other_T1w_softseg.json => sub-fslAchieva05_space-other_T1w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-fslAchieva05/anat/{sub-fslAchieva05_space-other_T1w_softseg.nii.gz => sub-fslAchieva05_space-other_T1w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-fslAchieva05/anat/{sub-fslAchieva05_space-other_T2star_softseg.json => sub-fslAchieva05_space-other_T2star_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-fslAchieva05/anat/{sub-fslAchieva05_space-other_T2star_softseg.nii.gz => sub-fslAchieva05_space-other_T2star_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-fslAchieva05/anat/{sub-fslAchieva05_space-other_T2w_softseg.json => sub-fslAchieva05_space-other_T2w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-fslAchieva05/anat/{sub-fslAchieva05_space-other_T2w_softseg.nii.gz => sub-fslAchieva05_space-other_T2w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-fslAchieva05/dwi/{sub-fslAchieva05_rec-average_dwi_softseg.json => sub-fslAchieva05_rec-average_dwi_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-fslAchieva05/dwi/{sub-fslAchieva05_rec-average_dwi_softseg.nii.gz => sub-fslAchieva05_rec-average_dwi_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-fslAchieva06/anat/{sub-fslAchieva06_flip-1_mt-on_space-other_MTS_softseg.json => sub-fslAchieva06_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-fslAchieva06/anat/{sub-fslAchieva06_flip-1_mt-on_space-other_MTS_softseg.nii.gz => sub-fslAchieva06_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-fslAchieva06/anat/{sub-fslAchieva06_flip-2_mt-off_space-other_MTS_softseg.json => sub-fslAchieva06_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-fslAchieva06/anat/{sub-fslAchieva06_flip-2_mt-off_space-other_MTS_softseg.nii.gz => sub-fslAchieva06_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-fslAchieva06/anat/{sub-fslAchieva06_space-other_T1w_softseg.json => sub-fslAchieva06_space-other_T1w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-fslAchieva06/anat/{sub-fslAchieva06_space-other_T1w_softseg.nii.gz => sub-fslAchieva06_space-other_T1w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-fslAchieva06/anat/{sub-fslAchieva06_space-other_T2star_softseg.json => sub-fslAchieva06_space-other_T2star_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-fslAchieva06/anat/{sub-fslAchieva06_space-other_T2star_softseg.nii.gz => sub-fslAchieva06_space-other_T2star_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-fslAchieva06/anat/{sub-fslAchieva06_space-other_T2w_softseg.json => sub-fslAchieva06_space-other_T2w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-fslAchieva06/anat/{sub-fslAchieva06_space-other_T2w_softseg.nii.gz => sub-fslAchieva06_space-other_T2w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-fslAchieva06/dwi/{sub-fslAchieva06_rec-average_dwi_softseg.json => sub-fslAchieva06_rec-average_dwi_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-fslAchieva06/dwi/{sub-fslAchieva06_rec-average_dwi_softseg.nii.gz => sub-fslAchieva06_rec-average_dwi_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-fslPrisma01/anat/{sub-fslPrisma01_flip-1_mt-on_space-other_MTS_softseg.json => sub-fslPrisma01_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-fslPrisma01/anat/{sub-fslPrisma01_flip-1_mt-on_space-other_MTS_softseg.nii.gz => sub-fslPrisma01_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-fslPrisma01/anat/{sub-fslPrisma01_flip-2_mt-off_space-other_MTS_softseg.json => sub-fslPrisma01_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-fslPrisma01/anat/{sub-fslPrisma01_flip-2_mt-off_space-other_MTS_softseg.nii.gz => sub-fslPrisma01_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-fslPrisma01/anat/{sub-fslPrisma01_space-other_T1w_softseg.json => sub-fslPrisma01_space-other_T1w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-fslPrisma01/anat/{sub-fslPrisma01_space-other_T1w_softseg.nii.gz => sub-fslPrisma01_space-other_T1w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-fslPrisma01/anat/{sub-fslPrisma01_space-other_T2star_softseg.json => sub-fslPrisma01_space-other_T2star_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-fslPrisma01/anat/{sub-fslPrisma01_space-other_T2star_softseg.nii.gz => sub-fslPrisma01_space-other_T2star_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-fslPrisma01/anat/{sub-fslPrisma01_space-other_T2w_softseg.json => sub-fslPrisma01_space-other_T2w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-fslPrisma01/anat/{sub-fslPrisma01_space-other_T2w_softseg.nii.gz => sub-fslPrisma01_space-other_T2w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-fslPrisma01/dwi/{sub-fslPrisma01_rec-average_dwi_softseg.json => sub-fslPrisma01_rec-average_dwi_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-fslPrisma01/dwi/{sub-fslPrisma01_rec-average_dwi_softseg.nii.gz => sub-fslPrisma01_rec-average_dwi_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-fslPrisma02/anat/{sub-fslPrisma02_flip-1_mt-on_space-other_MTS_softseg.json => sub-fslPrisma02_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-fslPrisma02/anat/{sub-fslPrisma02_flip-1_mt-on_space-other_MTS_softseg.nii.gz => sub-fslPrisma02_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-fslPrisma02/anat/{sub-fslPrisma02_flip-2_mt-off_space-other_MTS_softseg.json => sub-fslPrisma02_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-fslPrisma02/anat/{sub-fslPrisma02_flip-2_mt-off_space-other_MTS_softseg.nii.gz => sub-fslPrisma02_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-fslPrisma02/anat/{sub-fslPrisma02_space-other_T1w_softseg.json => sub-fslPrisma02_space-other_T1w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-fslPrisma02/anat/{sub-fslPrisma02_space-other_T1w_softseg.nii.gz => sub-fslPrisma02_space-other_T1w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-fslPrisma02/anat/{sub-fslPrisma02_space-other_T2star_softseg.json => sub-fslPrisma02_space-other_T2star_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-fslPrisma02/anat/{sub-fslPrisma02_space-other_T2star_softseg.nii.gz => sub-fslPrisma02_space-other_T2star_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-fslPrisma02/anat/{sub-fslPrisma02_space-other_T2w_softseg.json => sub-fslPrisma02_space-other_T2w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-fslPrisma02/anat/{sub-fslPrisma02_space-other_T2w_softseg.nii.gz => sub-fslPrisma02_space-other_T2w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-fslPrisma02/dwi/{sub-fslPrisma02_rec-average_dwi_softseg.json => sub-fslPrisma02_rec-average_dwi_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-fslPrisma02/dwi/{sub-fslPrisma02_rec-average_dwi_softseg.nii.gz => sub-fslPrisma02_rec-average_dwi_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-fslPrisma03/anat/{sub-fslPrisma03_flip-1_mt-on_space-other_MTS_softseg.json => sub-fslPrisma03_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-fslPrisma03/anat/{sub-fslPrisma03_flip-1_mt-on_space-other_MTS_softseg.nii.gz => sub-fslPrisma03_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-fslPrisma03/anat/{sub-fslPrisma03_flip-2_mt-off_space-other_MTS_softseg.json => sub-fslPrisma03_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-fslPrisma03/anat/{sub-fslPrisma03_flip-2_mt-off_space-other_MTS_softseg.nii.gz => sub-fslPrisma03_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-fslPrisma03/anat/{sub-fslPrisma03_space-other_T1w_softseg.json => sub-fslPrisma03_space-other_T1w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-fslPrisma03/anat/{sub-fslPrisma03_space-other_T1w_softseg.nii.gz => sub-fslPrisma03_space-other_T1w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-fslPrisma03/anat/{sub-fslPrisma03_space-other_T2star_softseg.json => sub-fslPrisma03_space-other_T2star_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-fslPrisma03/anat/{sub-fslPrisma03_space-other_T2star_softseg.nii.gz => sub-fslPrisma03_space-other_T2star_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-fslPrisma03/anat/{sub-fslPrisma03_space-other_T2w_softseg.json => sub-fslPrisma03_space-other_T2w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-fslPrisma03/anat/{sub-fslPrisma03_space-other_T2w_softseg.nii.gz => sub-fslPrisma03_space-other_T2w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-fslPrisma03/dwi/{sub-fslPrisma03_rec-average_dwi_softseg.json => sub-fslPrisma03_rec-average_dwi_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-fslPrisma03/dwi/{sub-fslPrisma03_rec-average_dwi_softseg.nii.gz => sub-fslPrisma03_rec-average_dwi_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-fslPrisma04/anat/{sub-fslPrisma04_flip-1_mt-on_space-other_MTS_softseg.json => sub-fslPrisma04_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-fslPrisma04/anat/{sub-fslPrisma04_flip-1_mt-on_space-other_MTS_softseg.nii.gz => sub-fslPrisma04_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-fslPrisma04/anat/{sub-fslPrisma04_flip-2_mt-off_space-other_MTS_softseg.json => sub-fslPrisma04_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-fslPrisma04/anat/{sub-fslPrisma04_flip-2_mt-off_space-other_MTS_softseg.nii.gz => sub-fslPrisma04_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-fslPrisma04/anat/{sub-fslPrisma04_space-other_T1w_softseg.json => sub-fslPrisma04_space-other_T1w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-fslPrisma04/anat/{sub-fslPrisma04_space-other_T1w_softseg.nii.gz => sub-fslPrisma04_space-other_T1w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-fslPrisma04/anat/{sub-fslPrisma04_space-other_T2star_softseg.json => sub-fslPrisma04_space-other_T2star_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-fslPrisma04/anat/{sub-fslPrisma04_space-other_T2star_softseg.nii.gz => sub-fslPrisma04_space-other_T2star_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-fslPrisma04/anat/{sub-fslPrisma04_space-other_T2w_softseg.json => sub-fslPrisma04_space-other_T2w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-fslPrisma04/anat/{sub-fslPrisma04_space-other_T2w_softseg.nii.gz => sub-fslPrisma04_space-other_T2w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-fslPrisma04/dwi/{sub-fslPrisma04_rec-average_dwi_softseg.json => sub-fslPrisma04_rec-average_dwi_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-fslPrisma04/dwi/{sub-fslPrisma04_rec-average_dwi_softseg.nii.gz => sub-fslPrisma04_rec-average_dwi_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-fslPrisma05/anat/{sub-fslPrisma05_flip-1_mt-on_space-other_MTS_softseg.json => sub-fslPrisma05_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-fslPrisma05/anat/{sub-fslPrisma05_flip-1_mt-on_space-other_MTS_softseg.nii.gz => sub-fslPrisma05_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-fslPrisma05/anat/{sub-fslPrisma05_flip-2_mt-off_space-other_MTS_softseg.json => sub-fslPrisma05_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-fslPrisma05/anat/{sub-fslPrisma05_flip-2_mt-off_space-other_MTS_softseg.nii.gz => sub-fslPrisma05_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-fslPrisma05/anat/{sub-fslPrisma05_space-other_T1w_softseg.json => sub-fslPrisma05_space-other_T1w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-fslPrisma05/anat/{sub-fslPrisma05_space-other_T1w_softseg.nii.gz => sub-fslPrisma05_space-other_T1w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-fslPrisma05/anat/{sub-fslPrisma05_space-other_T2star_softseg.json => sub-fslPrisma05_space-other_T2star_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-fslPrisma05/anat/{sub-fslPrisma05_space-other_T2star_softseg.nii.gz => sub-fslPrisma05_space-other_T2star_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-fslPrisma05/anat/{sub-fslPrisma05_space-other_T2w_softseg.json => sub-fslPrisma05_space-other_T2w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-fslPrisma05/anat/{sub-fslPrisma05_space-other_T2w_softseg.nii.gz => sub-fslPrisma05_space-other_T2w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-fslPrisma05/dwi/{sub-fslPrisma05_rec-average_dwi_softseg.json => sub-fslPrisma05_rec-average_dwi_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-fslPrisma05/dwi/{sub-fslPrisma05_rec-average_dwi_softseg.nii.gz => sub-fslPrisma05_rec-average_dwi_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-fslPrisma06/anat/{sub-fslPrisma06_flip-1_mt-on_space-other_MTS_softseg.json => sub-fslPrisma06_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-fslPrisma06/anat/{sub-fslPrisma06_flip-1_mt-on_space-other_MTS_softseg.nii.gz => sub-fslPrisma06_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-fslPrisma06/anat/{sub-fslPrisma06_flip-2_mt-off_space-other_MTS_softseg.json => sub-fslPrisma06_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-fslPrisma06/anat/{sub-fslPrisma06_flip-2_mt-off_space-other_MTS_softseg.nii.gz => sub-fslPrisma06_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-fslPrisma06/anat/{sub-fslPrisma06_space-other_T1w_softseg.json => sub-fslPrisma06_space-other_T1w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-fslPrisma06/anat/{sub-fslPrisma06_space-other_T1w_softseg.nii.gz => sub-fslPrisma06_space-other_T1w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-fslPrisma06/anat/{sub-fslPrisma06_space-other_T2star_softseg.json => sub-fslPrisma06_space-other_T2star_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-fslPrisma06/anat/{sub-fslPrisma06_space-other_T2star_softseg.nii.gz => sub-fslPrisma06_space-other_T2star_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-fslPrisma06/anat/{sub-fslPrisma06_space-other_T2w_softseg.json => sub-fslPrisma06_space-other_T2w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-fslPrisma06/anat/{sub-fslPrisma06_space-other_T2w_softseg.nii.gz => sub-fslPrisma06_space-other_T2w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-fslPrisma06/dwi/{sub-fslPrisma06_rec-average_dwi_softseg.json => sub-fslPrisma06_rec-average_dwi_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-fslPrisma06/dwi/{sub-fslPrisma06_rec-average_dwi_softseg.nii.gz => sub-fslPrisma06_rec-average_dwi_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-geneva01/anat/{sub-geneva01_flip-1_mt-on_space-other_MTS_softseg.json => sub-geneva01_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-geneva01/anat/{sub-geneva01_flip-1_mt-on_space-other_MTS_softseg.nii.gz => sub-geneva01_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-geneva01/anat/{sub-geneva01_flip-2_mt-off_space-other_MTS_softseg.json => sub-geneva01_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-geneva01/anat/{sub-geneva01_flip-2_mt-off_space-other_MTS_softseg.nii.gz => sub-geneva01_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-geneva01/anat/{sub-geneva01_space-other_T1w_softseg.json => sub-geneva01_space-other_T1w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-geneva01/anat/{sub-geneva01_space-other_T1w_softseg.nii.gz => sub-geneva01_space-other_T1w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-geneva01/anat/{sub-geneva01_space-other_T2star_softseg.json => sub-geneva01_space-other_T2star_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-geneva01/anat/{sub-geneva01_space-other_T2star_softseg.nii.gz => sub-geneva01_space-other_T2star_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-geneva01/anat/{sub-geneva01_space-other_T2w_softseg.json => sub-geneva01_space-other_T2w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-geneva01/anat/{sub-geneva01_space-other_T2w_softseg.nii.gz => sub-geneva01_space-other_T2w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-geneva01/dwi/{sub-geneva01_rec-average_dwi_softseg.json => sub-geneva01_rec-average_dwi_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-geneva01/dwi/{sub-geneva01_rec-average_dwi_softseg.nii.gz => sub-geneva01_rec-average_dwi_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-geneva02/anat/{sub-geneva02_flip-1_mt-on_space-other_MTS_softseg.json => sub-geneva02_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-geneva02/anat/{sub-geneva02_flip-1_mt-on_space-other_MTS_softseg.nii.gz => sub-geneva02_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-geneva02/anat/{sub-geneva02_flip-2_mt-off_space-other_MTS_softseg.json => sub-geneva02_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-geneva02/anat/{sub-geneva02_flip-2_mt-off_space-other_MTS_softseg.nii.gz => sub-geneva02_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-geneva02/anat/{sub-geneva02_space-other_T1w_softseg.json => sub-geneva02_space-other_T1w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-geneva02/anat/{sub-geneva02_space-other_T1w_softseg.nii.gz => sub-geneva02_space-other_T1w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-geneva02/anat/{sub-geneva02_space-other_T2star_softseg.json => sub-geneva02_space-other_T2star_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-geneva02/anat/{sub-geneva02_space-other_T2star_softseg.nii.gz => sub-geneva02_space-other_T2star_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-geneva02/anat/{sub-geneva02_space-other_T2w_softseg.json => sub-geneva02_space-other_T2w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-geneva02/anat/{sub-geneva02_space-other_T2w_softseg.nii.gz => sub-geneva02_space-other_T2w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-geneva02/dwi/{sub-geneva02_rec-average_dwi_softseg.json => sub-geneva02_rec-average_dwi_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-geneva02/dwi/{sub-geneva02_rec-average_dwi_softseg.nii.gz => sub-geneva02_rec-average_dwi_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-geneva03/anat/{sub-geneva03_flip-1_mt-on_space-other_MTS_softseg.json => sub-geneva03_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-geneva03/anat/{sub-geneva03_flip-1_mt-on_space-other_MTS_softseg.nii.gz => sub-geneva03_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-geneva03/anat/{sub-geneva03_flip-2_mt-off_space-other_MTS_softseg.json => sub-geneva03_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-geneva03/anat/{sub-geneva03_flip-2_mt-off_space-other_MTS_softseg.nii.gz => sub-geneva03_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-geneva03/anat/{sub-geneva03_space-other_T1w_softseg.json => sub-geneva03_space-other_T1w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-geneva03/anat/{sub-geneva03_space-other_T1w_softseg.nii.gz => sub-geneva03_space-other_T1w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-geneva03/anat/{sub-geneva03_space-other_T2star_softseg.json => sub-geneva03_space-other_T2star_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-geneva03/anat/{sub-geneva03_space-other_T2star_softseg.nii.gz => sub-geneva03_space-other_T2star_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-geneva03/anat/{sub-geneva03_space-other_T2w_softseg.json => sub-geneva03_space-other_T2w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-geneva03/anat/{sub-geneva03_space-other_T2w_softseg.nii.gz => sub-geneva03_space-other_T2w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-geneva03/dwi/{sub-geneva03_rec-average_dwi_softseg.json => sub-geneva03_rec-average_dwi_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-geneva03/dwi/{sub-geneva03_rec-average_dwi_softseg.nii.gz => sub-geneva03_rec-average_dwi_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-geneva04/anat/{sub-geneva04_flip-1_mt-on_space-other_MTS_softseg.json => sub-geneva04_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-geneva04/anat/{sub-geneva04_flip-1_mt-on_space-other_MTS_softseg.nii.gz => sub-geneva04_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-geneva04/anat/{sub-geneva04_flip-2_mt-off_space-other_MTS_softseg.json => sub-geneva04_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-geneva04/anat/{sub-geneva04_flip-2_mt-off_space-other_MTS_softseg.nii.gz => sub-geneva04_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-geneva04/anat/{sub-geneva04_space-other_T1w_softseg.json => sub-geneva04_space-other_T1w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-geneva04/anat/{sub-geneva04_space-other_T1w_softseg.nii.gz => sub-geneva04_space-other_T1w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-geneva04/anat/{sub-geneva04_space-other_T2star_softseg.json => sub-geneva04_space-other_T2star_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-geneva04/anat/{sub-geneva04_space-other_T2star_softseg.nii.gz => sub-geneva04_space-other_T2star_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-geneva04/anat/{sub-geneva04_space-other_T2w_softseg.json => sub-geneva04_space-other_T2w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-geneva04/anat/{sub-geneva04_space-other_T2w_softseg.nii.gz => sub-geneva04_space-other_T2w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-geneva04/dwi/{sub-geneva04_rec-average_dwi_softseg.json => sub-geneva04_rec-average_dwi_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-geneva04/dwi/{sub-geneva04_rec-average_dwi_softseg.nii.gz => sub-geneva04_rec-average_dwi_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-geneva05/anat/{sub-geneva05_flip-1_mt-on_space-other_MTS_softseg.json => sub-geneva05_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-geneva05/anat/{sub-geneva05_flip-1_mt-on_space-other_MTS_softseg.nii.gz => sub-geneva05_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-geneva05/anat/{sub-geneva05_flip-2_mt-off_space-other_MTS_softseg.json => sub-geneva05_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-geneva05/anat/{sub-geneva05_flip-2_mt-off_space-other_MTS_softseg.nii.gz => sub-geneva05_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-geneva05/anat/{sub-geneva05_space-other_T1w_softseg.json => sub-geneva05_space-other_T1w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-geneva05/anat/{sub-geneva05_space-other_T1w_softseg.nii.gz => sub-geneva05_space-other_T1w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-geneva05/anat/{sub-geneva05_space-other_T2star_softseg.json => sub-geneva05_space-other_T2star_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-geneva05/anat/{sub-geneva05_space-other_T2star_softseg.nii.gz => sub-geneva05_space-other_T2star_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-geneva05/anat/{sub-geneva05_space-other_T2w_softseg.json => sub-geneva05_space-other_T2w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-geneva05/anat/{sub-geneva05_space-other_T2w_softseg.nii.gz => sub-geneva05_space-other_T2w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-geneva05/dwi/{sub-geneva05_rec-average_dwi_softseg.json => sub-geneva05_rec-average_dwi_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-geneva05/dwi/{sub-geneva05_rec-average_dwi_softseg.nii.gz => sub-geneva05_rec-average_dwi_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-geneva06/anat/{sub-geneva06_flip-1_mt-on_space-other_MTS_softseg.json => sub-geneva06_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-geneva06/anat/{sub-geneva06_flip-1_mt-on_space-other_MTS_softseg.nii.gz => sub-geneva06_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-geneva06/anat/{sub-geneva06_flip-2_mt-off_space-other_MTS_softseg.json => sub-geneva06_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-geneva06/anat/{sub-geneva06_flip-2_mt-off_space-other_MTS_softseg.nii.gz => sub-geneva06_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-geneva06/anat/{sub-geneva06_space-other_T1w_softseg.json => sub-geneva06_space-other_T1w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-geneva06/anat/{sub-geneva06_space-other_T1w_softseg.nii.gz => sub-geneva06_space-other_T1w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-geneva06/anat/{sub-geneva06_space-other_T2star_softseg.json => sub-geneva06_space-other_T2star_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-geneva06/anat/{sub-geneva06_space-other_T2star_softseg.nii.gz => sub-geneva06_space-other_T2star_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-geneva06/anat/{sub-geneva06_space-other_T2w_softseg.json => sub-geneva06_space-other_T2w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-geneva06/anat/{sub-geneva06_space-other_T2w_softseg.nii.gz => sub-geneva06_space-other_T2w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-geneva06/dwi/{sub-geneva06_rec-average_dwi_softseg.json => sub-geneva06_rec-average_dwi_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-geneva06/dwi/{sub-geneva06_rec-average_dwi_softseg.nii.gz => sub-geneva06_rec-average_dwi_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-hamburg01/anat/{sub-hamburg01_flip-1_mt-on_space-other_MTS_softseg.json => sub-hamburg01_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-hamburg01/anat/{sub-hamburg01_flip-1_mt-on_space-other_MTS_softseg.nii.gz => sub-hamburg01_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-hamburg01/anat/{sub-hamburg01_flip-2_mt-off_space-other_MTS_softseg.json => sub-hamburg01_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-hamburg01/anat/{sub-hamburg01_flip-2_mt-off_space-other_MTS_softseg.nii.gz => sub-hamburg01_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-hamburg01/anat/{sub-hamburg01_space-other_T1w_softseg.json => sub-hamburg01_space-other_T1w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-hamburg01/anat/{sub-hamburg01_space-other_T1w_softseg.nii.gz => sub-hamburg01_space-other_T1w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-hamburg01/anat/{sub-hamburg01_space-other_T2star_softseg.json => sub-hamburg01_space-other_T2star_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-hamburg01/anat/{sub-hamburg01_space-other_T2star_softseg.nii.gz => sub-hamburg01_space-other_T2star_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-hamburg01/anat/{sub-hamburg01_space-other_T2w_softseg.json => sub-hamburg01_space-other_T2w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-hamburg01/anat/{sub-hamburg01_space-other_T2w_softseg.nii.gz => sub-hamburg01_space-other_T2w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-hamburg01/dwi/{sub-hamburg01_rec-average_dwi_softseg.json => sub-hamburg01_rec-average_dwi_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-hamburg01/dwi/{sub-hamburg01_rec-average_dwi_softseg.nii.gz => sub-hamburg01_rec-average_dwi_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-hamburg02/anat/{sub-hamburg02_flip-1_mt-on_space-other_MTS_softseg.json => sub-hamburg02_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-hamburg02/anat/{sub-hamburg02_flip-1_mt-on_space-other_MTS_softseg.nii.gz => sub-hamburg02_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-hamburg02/anat/{sub-hamburg02_flip-2_mt-off_space-other_MTS_softseg.json => sub-hamburg02_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-hamburg02/anat/{sub-hamburg02_flip-2_mt-off_space-other_MTS_softseg.nii.gz => sub-hamburg02_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-hamburg02/anat/{sub-hamburg02_space-other_T1w_softseg.json => sub-hamburg02_space-other_T1w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-hamburg02/anat/{sub-hamburg02_space-other_T1w_softseg.nii.gz => sub-hamburg02_space-other_T1w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-hamburg02/anat/{sub-hamburg02_space-other_T2star_softseg.json => sub-hamburg02_space-other_T2star_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-hamburg02/anat/{sub-hamburg02_space-other_T2star_softseg.nii.gz => sub-hamburg02_space-other_T2star_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-hamburg02/anat/{sub-hamburg02_space-other_T2w_softseg.json => sub-hamburg02_space-other_T2w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-hamburg02/anat/{sub-hamburg02_space-other_T2w_softseg.nii.gz => sub-hamburg02_space-other_T2w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-hamburg02/dwi/{sub-hamburg02_rec-average_dwi_softseg.json => sub-hamburg02_rec-average_dwi_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-hamburg02/dwi/{sub-hamburg02_rec-average_dwi_softseg.nii.gz => sub-hamburg02_rec-average_dwi_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-hamburg03/anat/{sub-hamburg03_flip-1_mt-on_space-other_MTS_softseg.json => sub-hamburg03_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-hamburg03/anat/{sub-hamburg03_flip-1_mt-on_space-other_MTS_softseg.nii.gz => sub-hamburg03_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-hamburg03/anat/{sub-hamburg03_flip-2_mt-off_space-other_MTS_softseg.json => sub-hamburg03_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-hamburg03/anat/{sub-hamburg03_flip-2_mt-off_space-other_MTS_softseg.nii.gz => sub-hamburg03_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-hamburg03/anat/{sub-hamburg03_space-other_T1w_softseg.json => sub-hamburg03_space-other_T1w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-hamburg03/anat/{sub-hamburg03_space-other_T1w_softseg.nii.gz => sub-hamburg03_space-other_T1w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-hamburg03/anat/{sub-hamburg03_space-other_T2star_softseg.json => sub-hamburg03_space-other_T2star_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-hamburg03/anat/{sub-hamburg03_space-other_T2star_softseg.nii.gz => sub-hamburg03_space-other_T2star_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-hamburg03/anat/{sub-hamburg03_space-other_T2w_softseg.json => sub-hamburg03_space-other_T2w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-hamburg03/anat/{sub-hamburg03_space-other_T2w_softseg.nii.gz => sub-hamburg03_space-other_T2w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-hamburg03/dwi/{sub-hamburg03_rec-average_dwi_softseg.json => sub-hamburg03_rec-average_dwi_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-hamburg03/dwi/{sub-hamburg03_rec-average_dwi_softseg.nii.gz => sub-hamburg03_rec-average_dwi_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-hamburg04/anat/{sub-hamburg04_flip-1_mt-on_space-other_MTS_softseg.json => sub-hamburg04_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-hamburg04/anat/{sub-hamburg04_flip-1_mt-on_space-other_MTS_softseg.nii.gz => sub-hamburg04_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-hamburg04/anat/{sub-hamburg04_flip-2_mt-off_space-other_MTS_softseg.json => sub-hamburg04_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-hamburg04/anat/{sub-hamburg04_flip-2_mt-off_space-other_MTS_softseg.nii.gz => sub-hamburg04_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-hamburg04/anat/{sub-hamburg04_space-other_T1w_softseg.json => sub-hamburg04_space-other_T1w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-hamburg04/anat/{sub-hamburg04_space-other_T1w_softseg.nii.gz => sub-hamburg04_space-other_T1w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-hamburg04/anat/{sub-hamburg04_space-other_T2star_softseg.json => sub-hamburg04_space-other_T2star_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-hamburg04/anat/{sub-hamburg04_space-other_T2star_softseg.nii.gz => sub-hamburg04_space-other_T2star_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-hamburg04/anat/{sub-hamburg04_space-other_T2w_softseg.json => sub-hamburg04_space-other_T2w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-hamburg04/anat/{sub-hamburg04_space-other_T2w_softseg.nii.gz => sub-hamburg04_space-other_T2w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-hamburg04/dwi/{sub-hamburg04_rec-average_dwi_softseg.json => sub-hamburg04_rec-average_dwi_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-hamburg04/dwi/{sub-hamburg04_rec-average_dwi_softseg.nii.gz => sub-hamburg04_rec-average_dwi_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-hamburg05/anat/{sub-hamburg05_flip-1_mt-on_space-other_MTS_softseg.json => sub-hamburg05_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-hamburg05/anat/{sub-hamburg05_flip-1_mt-on_space-other_MTS_softseg.nii.gz => sub-hamburg05_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-hamburg05/anat/{sub-hamburg05_flip-2_mt-off_space-other_MTS_softseg.json => sub-hamburg05_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-hamburg05/anat/{sub-hamburg05_flip-2_mt-off_space-other_MTS_softseg.nii.gz => sub-hamburg05_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-hamburg05/anat/{sub-hamburg05_space-other_T1w_softseg.json => sub-hamburg05_space-other_T1w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-hamburg05/anat/{sub-hamburg05_space-other_T1w_softseg.nii.gz => sub-hamburg05_space-other_T1w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-hamburg05/anat/{sub-hamburg05_space-other_T2star_softseg.json => sub-hamburg05_space-other_T2star_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-hamburg05/anat/{sub-hamburg05_space-other_T2star_softseg.nii.gz => sub-hamburg05_space-other_T2star_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-hamburg05/anat/{sub-hamburg05_space-other_T2w_softseg.json => sub-hamburg05_space-other_T2w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-hamburg05/anat/{sub-hamburg05_space-other_T2w_softseg.nii.gz => sub-hamburg05_space-other_T2w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-hamburg05/dwi/{sub-hamburg05_rec-average_dwi_softseg.json => sub-hamburg05_rec-average_dwi_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-hamburg05/dwi/{sub-hamburg05_rec-average_dwi_softseg.nii.gz => sub-hamburg05_rec-average_dwi_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-hamburg06/anat/{sub-hamburg06_flip-1_mt-on_space-other_MTS_softseg.json => sub-hamburg06_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-hamburg06/anat/{sub-hamburg06_flip-1_mt-on_space-other_MTS_softseg.nii.gz => sub-hamburg06_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-hamburg06/anat/{sub-hamburg06_flip-2_mt-off_space-other_MTS_softseg.json => sub-hamburg06_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-hamburg06/anat/{sub-hamburg06_flip-2_mt-off_space-other_MTS_softseg.nii.gz => sub-hamburg06_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-hamburg06/anat/{sub-hamburg06_space-other_T1w_softseg.json => sub-hamburg06_space-other_T1w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-hamburg06/anat/{sub-hamburg06_space-other_T1w_softseg.nii.gz => sub-hamburg06_space-other_T1w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-hamburg06/anat/{sub-hamburg06_space-other_T2star_softseg.json => sub-hamburg06_space-other_T2star_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-hamburg06/anat/{sub-hamburg06_space-other_T2star_softseg.nii.gz => sub-hamburg06_space-other_T2star_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-hamburg06/anat/{sub-hamburg06_space-other_T2w_softseg.json => sub-hamburg06_space-other_T2w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-hamburg06/anat/{sub-hamburg06_space-other_T2w_softseg.nii.gz => sub-hamburg06_space-other_T2w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-hamburg06/dwi/{sub-hamburg06_rec-average_dwi_softseg.json => sub-hamburg06_rec-average_dwi_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-hamburg06/dwi/{sub-hamburg06_rec-average_dwi_softseg.nii.gz => sub-hamburg06_rec-average_dwi_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-juntendo750w01/anat/{sub-juntendo750w01_flip-1_mt-on_space-other_MTS_softseg.json => sub-juntendo750w01_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-juntendo750w01/anat/{sub-juntendo750w01_flip-1_mt-on_space-other_MTS_softseg.nii.gz => sub-juntendo750w01_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-juntendo750w01/anat/{sub-juntendo750w01_flip-2_mt-off_space-other_MTS_softseg.json => sub-juntendo750w01_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-juntendo750w01/anat/{sub-juntendo750w01_flip-2_mt-off_space-other_MTS_softseg.nii.gz => sub-juntendo750w01_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-juntendo750w01/anat/{sub-juntendo750w01_space-other_T1w_softseg.json => sub-juntendo750w01_space-other_T1w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-juntendo750w01/anat/{sub-juntendo750w01_space-other_T1w_softseg.nii.gz => sub-juntendo750w01_space-other_T1w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-juntendo750w01/anat/{sub-juntendo750w01_space-other_T2star_softseg.json => sub-juntendo750w01_space-other_T2star_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-juntendo750w01/anat/{sub-juntendo750w01_space-other_T2star_softseg.nii.gz => sub-juntendo750w01_space-other_T2star_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-juntendo750w01/anat/{sub-juntendo750w01_space-other_T2w_softseg.json => sub-juntendo750w01_space-other_T2w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-juntendo750w01/anat/{sub-juntendo750w01_space-other_T2w_softseg.nii.gz => sub-juntendo750w01_space-other_T2w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-juntendo750w01/dwi/{sub-juntendo750w01_rec-average_dwi_softseg.json => sub-juntendo750w01_rec-average_dwi_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-juntendo750w01/dwi/{sub-juntendo750w01_rec-average_dwi_softseg.nii.gz => sub-juntendo750w01_rec-average_dwi_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-juntendo750w02/anat/{sub-juntendo750w02_flip-1_mt-on_space-other_MTS_softseg.json => sub-juntendo750w02_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-juntendo750w02/anat/{sub-juntendo750w02_flip-1_mt-on_space-other_MTS_softseg.nii.gz => sub-juntendo750w02_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-juntendo750w02/anat/{sub-juntendo750w02_flip-2_mt-off_space-other_MTS_softseg.json => sub-juntendo750w02_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-juntendo750w02/anat/{sub-juntendo750w02_flip-2_mt-off_space-other_MTS_softseg.nii.gz => sub-juntendo750w02_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-juntendo750w02/anat/{sub-juntendo750w02_space-other_T1w_softseg.json => sub-juntendo750w02_space-other_T1w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-juntendo750w02/anat/{sub-juntendo750w02_space-other_T1w_softseg.nii.gz => sub-juntendo750w02_space-other_T1w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-juntendo750w02/anat/{sub-juntendo750w02_space-other_T2star_softseg.json => sub-juntendo750w02_space-other_T2star_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-juntendo750w02/anat/{sub-juntendo750w02_space-other_T2star_softseg.nii.gz => sub-juntendo750w02_space-other_T2star_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-juntendo750w02/anat/{sub-juntendo750w02_space-other_T2w_softseg.json => sub-juntendo750w02_space-other_T2w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-juntendo750w02/anat/{sub-juntendo750w02_space-other_T2w_softseg.nii.gz => sub-juntendo750w02_space-other_T2w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-juntendo750w02/dwi/{sub-juntendo750w02_rec-average_dwi_softseg.json => sub-juntendo750w02_rec-average_dwi_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-juntendo750w02/dwi/{sub-juntendo750w02_rec-average_dwi_softseg.nii.gz => sub-juntendo750w02_rec-average_dwi_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-juntendo750w03/anat/{sub-juntendo750w03_flip-1_mt-on_space-other_MTS_softseg.json => sub-juntendo750w03_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-juntendo750w03/anat/{sub-juntendo750w03_flip-1_mt-on_space-other_MTS_softseg.nii.gz => sub-juntendo750w03_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-juntendo750w03/anat/{sub-juntendo750w03_flip-2_mt-off_space-other_MTS_softseg.json => sub-juntendo750w03_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-juntendo750w03/anat/{sub-juntendo750w03_flip-2_mt-off_space-other_MTS_softseg.nii.gz => sub-juntendo750w03_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-juntendo750w03/anat/{sub-juntendo750w03_space-other_T1w_softseg.json => sub-juntendo750w03_space-other_T1w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-juntendo750w03/anat/{sub-juntendo750w03_space-other_T1w_softseg.nii.gz => sub-juntendo750w03_space-other_T1w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-juntendo750w03/anat/{sub-juntendo750w03_space-other_T2star_softseg.json => sub-juntendo750w03_space-other_T2star_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-juntendo750w03/anat/{sub-juntendo750w03_space-other_T2star_softseg.nii.gz => sub-juntendo750w03_space-other_T2star_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-juntendo750w03/anat/{sub-juntendo750w03_space-other_T2w_softseg.json => sub-juntendo750w03_space-other_T2w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-juntendo750w03/anat/{sub-juntendo750w03_space-other_T2w_softseg.nii.gz => sub-juntendo750w03_space-other_T2w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-juntendo750w03/dwi/{sub-juntendo750w03_rec-average_dwi_softseg.json => sub-juntendo750w03_rec-average_dwi_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-juntendo750w03/dwi/{sub-juntendo750w03_rec-average_dwi_softseg.nii.gz => sub-juntendo750w03_rec-average_dwi_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-juntendo750w04/anat/{sub-juntendo750w04_flip-1_mt-on_space-other_MTS_softseg.json => sub-juntendo750w04_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-juntendo750w04/anat/{sub-juntendo750w04_flip-1_mt-on_space-other_MTS_softseg.nii.gz => sub-juntendo750w04_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-juntendo750w04/anat/{sub-juntendo750w04_flip-2_mt-off_space-other_MTS_softseg.json => sub-juntendo750w04_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-juntendo750w04/anat/{sub-juntendo750w04_flip-2_mt-off_space-other_MTS_softseg.nii.gz => sub-juntendo750w04_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-juntendo750w04/anat/{sub-juntendo750w04_space-other_T1w_softseg.json => sub-juntendo750w04_space-other_T1w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-juntendo750w04/anat/{sub-juntendo750w04_space-other_T1w_softseg.nii.gz => sub-juntendo750w04_space-other_T1w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-juntendo750w04/anat/{sub-juntendo750w04_space-other_T2star_softseg.json => sub-juntendo750w04_space-other_T2star_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-juntendo750w04/anat/{sub-juntendo750w04_space-other_T2star_softseg.nii.gz => sub-juntendo750w04_space-other_T2star_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-juntendo750w04/anat/{sub-juntendo750w04_space-other_T2w_softseg.json => sub-juntendo750w04_space-other_T2w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-juntendo750w04/anat/{sub-juntendo750w04_space-other_T2w_softseg.nii.gz => sub-juntendo750w04_space-other_T2w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-juntendo750w04/dwi/{sub-juntendo750w04_rec-average_dwi_softseg.json => sub-juntendo750w04_rec-average_dwi_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-juntendo750w04/dwi/{sub-juntendo750w04_rec-average_dwi_softseg.nii.gz => sub-juntendo750w04_rec-average_dwi_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-juntendo750w05/anat/{sub-juntendo750w05_flip-1_mt-on_space-other_MTS_softseg.json => sub-juntendo750w05_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-juntendo750w05/anat/{sub-juntendo750w05_flip-1_mt-on_space-other_MTS_softseg.nii.gz => sub-juntendo750w05_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-juntendo750w05/anat/{sub-juntendo750w05_flip-2_mt-off_space-other_MTS_softseg.json => sub-juntendo750w05_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-juntendo750w05/anat/{sub-juntendo750w05_flip-2_mt-off_space-other_MTS_softseg.nii.gz => sub-juntendo750w05_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-juntendo750w05/anat/{sub-juntendo750w05_space-other_T1w_softseg.json => sub-juntendo750w05_space-other_T1w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-juntendo750w05/anat/{sub-juntendo750w05_space-other_T1w_softseg.nii.gz => sub-juntendo750w05_space-other_T1w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-juntendo750w05/anat/{sub-juntendo750w05_space-other_T2star_softseg.json => sub-juntendo750w05_space-other_T2star_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-juntendo750w05/anat/{sub-juntendo750w05_space-other_T2star_softseg.nii.gz => sub-juntendo750w05_space-other_T2star_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-juntendo750w05/anat/{sub-juntendo750w05_space-other_T2w_softseg.json => sub-juntendo750w05_space-other_T2w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-juntendo750w05/anat/{sub-juntendo750w05_space-other_T2w_softseg.nii.gz => sub-juntendo750w05_space-other_T2w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-juntendo750w05/dwi/{sub-juntendo750w05_rec-average_dwi_softseg.json => sub-juntendo750w05_rec-average_dwi_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-juntendo750w05/dwi/{sub-juntendo750w05_rec-average_dwi_softseg.nii.gz => sub-juntendo750w05_rec-average_dwi_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-juntendo750w06/anat/{sub-juntendo750w06_flip-1_mt-on_space-other_MTS_softseg.json => sub-juntendo750w06_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-juntendo750w06/anat/{sub-juntendo750w06_flip-1_mt-on_space-other_MTS_softseg.nii.gz => sub-juntendo750w06_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-juntendo750w06/anat/{sub-juntendo750w06_flip-2_mt-off_space-other_MTS_softseg.json => sub-juntendo750w06_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-juntendo750w06/anat/{sub-juntendo750w06_flip-2_mt-off_space-other_MTS_softseg.nii.gz => sub-juntendo750w06_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-juntendo750w06/anat/{sub-juntendo750w06_space-other_T1w_softseg.json => sub-juntendo750w06_space-other_T1w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-juntendo750w06/anat/{sub-juntendo750w06_space-other_T1w_softseg.nii.gz => sub-juntendo750w06_space-other_T1w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-juntendo750w06/anat/{sub-juntendo750w06_space-other_T2star_softseg.json => sub-juntendo750w06_space-other_T2star_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-juntendo750w06/anat/{sub-juntendo750w06_space-other_T2star_softseg.nii.gz => sub-juntendo750w06_space-other_T2star_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-juntendo750w06/anat/{sub-juntendo750w06_space-other_T2w_softseg.json => sub-juntendo750w06_space-other_T2w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-juntendo750w06/anat/{sub-juntendo750w06_space-other_T2w_softseg.nii.gz => sub-juntendo750w06_space-other_T2w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-juntendo750w06/dwi/{sub-juntendo750w06_rec-average_dwi_softseg.json => sub-juntendo750w06_rec-average_dwi_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-juntendo750w06/dwi/{sub-juntendo750w06_rec-average_dwi_softseg.nii.gz => sub-juntendo750w06_rec-average_dwi_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mgh01/anat/{sub-mgh01_flip-1_mt-on_space-other_MTS_softseg.json => sub-mgh01_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-mgh01/anat/{sub-mgh01_flip-1_mt-on_space-other_MTS_softseg.nii.gz => sub-mgh01_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mgh01/anat/{sub-mgh01_flip-2_mt-off_space-other_MTS_softseg.json => sub-mgh01_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-mgh01/anat/{sub-mgh01_flip-2_mt-off_space-other_MTS_softseg.nii.gz => sub-mgh01_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mgh01/anat/{sub-mgh01_space-other_T1w_softseg.json => sub-mgh01_space-other_T1w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-mgh01/anat/{sub-mgh01_space-other_T1w_softseg.nii.gz => sub-mgh01_space-other_T1w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mgh01/anat/{sub-mgh01_space-other_T2star_softseg.json => sub-mgh01_space-other_T2star_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-mgh01/anat/{sub-mgh01_space-other_T2star_softseg.nii.gz => sub-mgh01_space-other_T2star_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mgh01/anat/{sub-mgh01_space-other_T2w_softseg.json => sub-mgh01_space-other_T2w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-mgh01/anat/{sub-mgh01_space-other_T2w_softseg.nii.gz => sub-mgh01_space-other_T2w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mgh01/dwi/{sub-mgh01_rec-average_dwi_softseg.json => sub-mgh01_rec-average_dwi_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-mgh01/dwi/{sub-mgh01_rec-average_dwi_softseg.nii.gz => sub-mgh01_rec-average_dwi_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mgh02/anat/{sub-mgh02_flip-1_mt-on_space-other_MTS_softseg.json => sub-mgh02_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-mgh02/anat/{sub-mgh02_flip-1_mt-on_space-other_MTS_softseg.nii.gz => sub-mgh02_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mgh02/anat/{sub-mgh02_flip-2_mt-off_space-other_MTS_softseg.json => sub-mgh02_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-mgh02/anat/{sub-mgh02_flip-2_mt-off_space-other_MTS_softseg.nii.gz => sub-mgh02_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mgh02/anat/{sub-mgh02_space-other_T1w_softseg.json => sub-mgh02_space-other_T1w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-mgh02/anat/{sub-mgh02_space-other_T1w_softseg.nii.gz => sub-mgh02_space-other_T1w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mgh02/anat/{sub-mgh02_space-other_T2star_softseg.json => sub-mgh02_space-other_T2star_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-mgh02/anat/{sub-mgh02_space-other_T2star_softseg.nii.gz => sub-mgh02_space-other_T2star_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mgh02/anat/{sub-mgh02_space-other_T2w_softseg.json => sub-mgh02_space-other_T2w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-mgh02/anat/{sub-mgh02_space-other_T2w_softseg.nii.gz => sub-mgh02_space-other_T2w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mgh02/dwi/{sub-mgh02_rec-average_dwi_softseg.json => sub-mgh02_rec-average_dwi_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-mgh02/dwi/{sub-mgh02_rec-average_dwi_softseg.nii.gz => sub-mgh02_rec-average_dwi_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mgh03/anat/{sub-mgh03_flip-1_mt-on_space-other_MTS_softseg.json => sub-mgh03_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-mgh03/anat/{sub-mgh03_flip-1_mt-on_space-other_MTS_softseg.nii.gz => sub-mgh03_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mgh03/anat/{sub-mgh03_flip-2_mt-off_space-other_MTS_softseg.json => sub-mgh03_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-mgh03/anat/{sub-mgh03_flip-2_mt-off_space-other_MTS_softseg.nii.gz => sub-mgh03_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mgh03/anat/{sub-mgh03_space-other_T1w_softseg.json => sub-mgh03_space-other_T1w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-mgh03/anat/{sub-mgh03_space-other_T1w_softseg.nii.gz => sub-mgh03_space-other_T1w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mgh03/anat/{sub-mgh03_space-other_T2star_softseg.json => sub-mgh03_space-other_T2star_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-mgh03/anat/{sub-mgh03_space-other_T2star_softseg.nii.gz => sub-mgh03_space-other_T2star_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mgh03/anat/{sub-mgh03_space-other_T2w_softseg.json => sub-mgh03_space-other_T2w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-mgh03/anat/{sub-mgh03_space-other_T2w_softseg.nii.gz => sub-mgh03_space-other_T2w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mgh03/dwi/{sub-mgh03_rec-average_dwi_softseg.json => sub-mgh03_rec-average_dwi_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-mgh03/dwi/{sub-mgh03_rec-average_dwi_softseg.nii.gz => sub-mgh03_rec-average_dwi_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mgh04/anat/{sub-mgh04_flip-1_mt-on_space-other_MTS_softseg.json => sub-mgh04_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-mgh04/anat/{sub-mgh04_flip-1_mt-on_space-other_MTS_softseg.nii.gz => sub-mgh04_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mgh04/anat/{sub-mgh04_flip-2_mt-off_space-other_MTS_softseg.json => sub-mgh04_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-mgh04/anat/{sub-mgh04_flip-2_mt-off_space-other_MTS_softseg.nii.gz => sub-mgh04_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mgh04/anat/{sub-mgh04_space-other_T1w_softseg.json => sub-mgh04_space-other_T1w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-mgh04/anat/{sub-mgh04_space-other_T1w_softseg.nii.gz => sub-mgh04_space-other_T1w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mgh04/anat/{sub-mgh04_space-other_T2star_softseg.json => sub-mgh04_space-other_T2star_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-mgh04/anat/{sub-mgh04_space-other_T2star_softseg.nii.gz => sub-mgh04_space-other_T2star_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mgh04/anat/{sub-mgh04_space-other_T2w_softseg.json => sub-mgh04_space-other_T2w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-mgh04/anat/{sub-mgh04_space-other_T2w_softseg.nii.gz => sub-mgh04_space-other_T2w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mgh04/dwi/{sub-mgh04_rec-average_dwi_softseg.json => sub-mgh04_rec-average_dwi_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-mgh04/dwi/{sub-mgh04_rec-average_dwi_softseg.nii.gz => sub-mgh04_rec-average_dwi_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mgh05/anat/{sub-mgh05_flip-1_mt-on_space-other_MTS_softseg.json => sub-mgh05_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-mgh05/anat/{sub-mgh05_flip-1_mt-on_space-other_MTS_softseg.nii.gz => sub-mgh05_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mgh05/anat/{sub-mgh05_flip-2_mt-off_space-other_MTS_softseg.json => sub-mgh05_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-mgh05/anat/{sub-mgh05_flip-2_mt-off_space-other_MTS_softseg.nii.gz => sub-mgh05_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mgh05/anat/{sub-mgh05_space-other_T1w_softseg.json => sub-mgh05_space-other_T1w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-mgh05/anat/{sub-mgh05_space-other_T1w_softseg.nii.gz => sub-mgh05_space-other_T1w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mgh05/anat/{sub-mgh05_space-other_T2star_softseg.json => sub-mgh05_space-other_T2star_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-mgh05/anat/{sub-mgh05_space-other_T2star_softseg.nii.gz => sub-mgh05_space-other_T2star_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mgh05/anat/{sub-mgh05_space-other_T2w_softseg.json => sub-mgh05_space-other_T2w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-mgh05/anat/{sub-mgh05_space-other_T2w_softseg.nii.gz => sub-mgh05_space-other_T2w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mgh05/dwi/{sub-mgh05_rec-average_dwi_softseg.json => sub-mgh05_rec-average_dwi_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-mgh05/dwi/{sub-mgh05_rec-average_dwi_softseg.nii.gz => sub-mgh05_rec-average_dwi_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mgh06/anat/{sub-mgh06_flip-1_mt-on_space-other_MTS_softseg.json => sub-mgh06_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-mgh06/anat/{sub-mgh06_flip-1_mt-on_space-other_MTS_softseg.nii.gz => sub-mgh06_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mgh06/anat/{sub-mgh06_flip-2_mt-off_space-other_MTS_softseg.json => sub-mgh06_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-mgh06/anat/{sub-mgh06_flip-2_mt-off_space-other_MTS_softseg.nii.gz => sub-mgh06_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mgh06/anat/{sub-mgh06_space-other_T1w_softseg.json => sub-mgh06_space-other_T1w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-mgh06/anat/{sub-mgh06_space-other_T1w_softseg.nii.gz => sub-mgh06_space-other_T1w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mgh06/anat/{sub-mgh06_space-other_T2star_softseg.json => sub-mgh06_space-other_T2star_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-mgh06/anat/{sub-mgh06_space-other_T2star_softseg.nii.gz => sub-mgh06_space-other_T2star_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mgh06/anat/{sub-mgh06_space-other_T2w_softseg.json => sub-mgh06_space-other_T2w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-mgh06/anat/{sub-mgh06_space-other_T2w_softseg.nii.gz => sub-mgh06_space-other_T2w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mgh06/dwi/{sub-mgh06_rec-average_dwi_softseg.json => sub-mgh06_rec-average_dwi_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-mgh06/dwi/{sub-mgh06_rec-average_dwi_softseg.nii.gz => sub-mgh06_rec-average_dwi_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-milan01/anat/{sub-milan01_flip-1_mt-on_space-other_MTS_softseg.json => sub-milan01_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-milan01/anat/{sub-milan01_flip-1_mt-on_space-other_MTS_softseg.nii.gz => sub-milan01_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-milan01/anat/{sub-milan01_flip-2_mt-off_space-other_MTS_softseg.json => sub-milan01_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-milan01/anat/{sub-milan01_flip-2_mt-off_space-other_MTS_softseg.nii.gz => sub-milan01_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-milan01/anat/{sub-milan01_space-other_T1w_softseg.json => sub-milan01_space-other_T1w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-milan01/anat/{sub-milan01_space-other_T1w_softseg.nii.gz => sub-milan01_space-other_T1w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-milan01/anat/{sub-milan01_space-other_T2star_softseg.json => sub-milan01_space-other_T2star_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-milan01/anat/{sub-milan01_space-other_T2star_softseg.nii.gz => sub-milan01_space-other_T2star_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-milan01/anat/{sub-milan01_space-other_T2w_softseg.json => sub-milan01_space-other_T2w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-milan01/anat/{sub-milan01_space-other_T2w_softseg.nii.gz => sub-milan01_space-other_T2w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-milan01/dwi/{sub-milan01_rec-average_dwi_softseg.json => sub-milan01_rec-average_dwi_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-milan01/dwi/{sub-milan01_rec-average_dwi_softseg.nii.gz => sub-milan01_rec-average_dwi_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-milan02/anat/{sub-milan02_flip-1_mt-on_space-other_MTS_softseg.json => sub-milan02_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-milan02/anat/{sub-milan02_flip-1_mt-on_space-other_MTS_softseg.nii.gz => sub-milan02_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-milan02/anat/{sub-milan02_flip-2_mt-off_space-other_MTS_softseg.json => sub-milan02_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-milan02/anat/{sub-milan02_flip-2_mt-off_space-other_MTS_softseg.nii.gz => sub-milan02_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-milan02/anat/{sub-milan02_space-other_T1w_softseg.json => sub-milan02_space-other_T1w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-milan02/anat/{sub-milan02_space-other_T1w_softseg.nii.gz => sub-milan02_space-other_T1w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-milan02/anat/{sub-milan02_space-other_T2star_softseg.json => sub-milan02_space-other_T2star_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-milan02/anat/{sub-milan02_space-other_T2star_softseg.nii.gz => sub-milan02_space-other_T2star_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-milan02/anat/{sub-milan02_space-other_T2w_softseg.json => sub-milan02_space-other_T2w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-milan02/anat/{sub-milan02_space-other_T2w_softseg.nii.gz => sub-milan02_space-other_T2w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-milan02/dwi/{sub-milan02_rec-average_dwi_softseg.json => sub-milan02_rec-average_dwi_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-milan02/dwi/{sub-milan02_rec-average_dwi_softseg.nii.gz => sub-milan02_rec-average_dwi_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-milan03/anat/{sub-milan03_flip-1_mt-on_space-other_MTS_softseg.json => sub-milan03_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-milan03/anat/{sub-milan03_flip-1_mt-on_space-other_MTS_softseg.nii.gz => sub-milan03_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-milan03/anat/{sub-milan03_flip-2_mt-off_space-other_MTS_softseg.json => sub-milan03_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-milan03/anat/{sub-milan03_flip-2_mt-off_space-other_MTS_softseg.nii.gz => sub-milan03_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-milan03/anat/{sub-milan03_space-other_T1w_softseg.json => sub-milan03_space-other_T1w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-milan03/anat/{sub-milan03_space-other_T1w_softseg.nii.gz => sub-milan03_space-other_T1w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-milan03/anat/{sub-milan03_space-other_T2star_softseg.json => sub-milan03_space-other_T2star_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-milan03/anat/{sub-milan03_space-other_T2star_softseg.nii.gz => sub-milan03_space-other_T2star_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-milan03/anat/{sub-milan03_space-other_T2w_softseg.json => sub-milan03_space-other_T2w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-milan03/anat/{sub-milan03_space-other_T2w_softseg.nii.gz => sub-milan03_space-other_T2w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-milan03/dwi/{sub-milan03_rec-average_dwi_softseg.json => sub-milan03_rec-average_dwi_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-milan03/dwi/{sub-milan03_rec-average_dwi_softseg.nii.gz => sub-milan03_rec-average_dwi_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-milan04/anat/{sub-milan04_flip-1_mt-on_space-other_MTS_softseg.json => sub-milan04_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-milan04/anat/{sub-milan04_flip-1_mt-on_space-other_MTS_softseg.nii.gz => sub-milan04_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-milan04/anat/{sub-milan04_flip-2_mt-off_space-other_MTS_softseg.json => sub-milan04_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-milan04/anat/{sub-milan04_flip-2_mt-off_space-other_MTS_softseg.nii.gz => sub-milan04_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-milan04/anat/{sub-milan04_space-other_T1w_softseg.json => sub-milan04_space-other_T1w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-milan04/anat/{sub-milan04_space-other_T1w_softseg.nii.gz => sub-milan04_space-other_T1w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-milan04/anat/{sub-milan04_space-other_T2star_softseg.json => sub-milan04_space-other_T2star_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-milan04/anat/{sub-milan04_space-other_T2star_softseg.nii.gz => sub-milan04_space-other_T2star_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-milan04/anat/{sub-milan04_space-other_T2w_softseg.json => sub-milan04_space-other_T2w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-milan04/anat/{sub-milan04_space-other_T2w_softseg.nii.gz => sub-milan04_space-other_T2w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-milan04/dwi/{sub-milan04_rec-average_dwi_softseg.json => sub-milan04_rec-average_dwi_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-milan04/dwi/{sub-milan04_rec-average_dwi_softseg.nii.gz => sub-milan04_rec-average_dwi_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-milan05/anat/{sub-milan05_flip-1_mt-on_space-other_MTS_softseg.json => sub-milan05_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-milan05/anat/{sub-milan05_flip-1_mt-on_space-other_MTS_softseg.nii.gz => sub-milan05_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-milan05/anat/{sub-milan05_flip-2_mt-off_space-other_MTS_softseg.json => sub-milan05_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-milan05/anat/{sub-milan05_flip-2_mt-off_space-other_MTS_softseg.nii.gz => sub-milan05_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-milan05/anat/{sub-milan05_space-other_T1w_softseg.json => sub-milan05_space-other_T1w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-milan05/anat/{sub-milan05_space-other_T1w_softseg.nii.gz => sub-milan05_space-other_T1w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-milan05/anat/{sub-milan05_space-other_T2star_softseg.json => sub-milan05_space-other_T2star_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-milan05/anat/{sub-milan05_space-other_T2star_softseg.nii.gz => sub-milan05_space-other_T2star_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-milan05/anat/{sub-milan05_space-other_T2w_softseg.json => sub-milan05_space-other_T2w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-milan05/anat/{sub-milan05_space-other_T2w_softseg.nii.gz => sub-milan05_space-other_T2w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-milan05/dwi/{sub-milan05_rec-average_dwi_softseg.json => sub-milan05_rec-average_dwi_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-milan05/dwi/{sub-milan05_rec-average_dwi_softseg.nii.gz => sub-milan05_rec-average_dwi_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-milan06/anat/{sub-milan06_flip-1_mt-on_space-other_MTS_softseg.json => sub-milan06_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-milan06/anat/{sub-milan06_flip-1_mt-on_space-other_MTS_softseg.nii.gz => sub-milan06_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-milan06/anat/{sub-milan06_flip-2_mt-off_space-other_MTS_softseg.json => sub-milan06_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-milan06/anat/{sub-milan06_flip-2_mt-off_space-other_MTS_softseg.nii.gz => sub-milan06_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-milan06/anat/{sub-milan06_space-other_T1w_softseg.json => sub-milan06_space-other_T1w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-milan06/anat/{sub-milan06_space-other_T1w_softseg.nii.gz => sub-milan06_space-other_T1w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-milan06/anat/{sub-milan06_space-other_T2star_softseg.json => sub-milan06_space-other_T2star_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-milan06/anat/{sub-milan06_space-other_T2star_softseg.nii.gz => sub-milan06_space-other_T2star_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-milan06/anat/{sub-milan06_space-other_T2w_softseg.json => sub-milan06_space-other_T2w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-milan06/anat/{sub-milan06_space-other_T2w_softseg.nii.gz => sub-milan06_space-other_T2w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-milan06/dwi/{sub-milan06_rec-average_dwi_softseg.json => sub-milan06_rec-average_dwi_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-milan06/dwi/{sub-milan06_rec-average_dwi_softseg.nii.gz => sub-milan06_rec-average_dwi_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-milan07/anat/{sub-milan07_flip-1_mt-on_space-other_MTS_softseg.json => sub-milan07_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-milan07/anat/{sub-milan07_flip-1_mt-on_space-other_MTS_softseg.nii.gz => sub-milan07_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-milan07/anat/{sub-milan07_flip-2_mt-off_space-other_MTS_softseg.json => sub-milan07_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-milan07/anat/{sub-milan07_flip-2_mt-off_space-other_MTS_softseg.nii.gz => sub-milan07_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-milan07/anat/{sub-milan07_space-other_T1w_softseg.json => sub-milan07_space-other_T1w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-milan07/anat/{sub-milan07_space-other_T1w_softseg.nii.gz => sub-milan07_space-other_T1w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-milan07/anat/{sub-milan07_space-other_T2star_softseg.json => sub-milan07_space-other_T2star_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-milan07/anat/{sub-milan07_space-other_T2star_softseg.nii.gz => sub-milan07_space-other_T2star_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-milan07/anat/{sub-milan07_space-other_T2w_softseg.json => sub-milan07_space-other_T2w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-milan07/anat/{sub-milan07_space-other_T2w_softseg.nii.gz => sub-milan07_space-other_T2w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-milan07/dwi/{sub-milan07_rec-average_dwi_softseg.json => sub-milan07_rec-average_dwi_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-milan07/dwi/{sub-milan07_rec-average_dwi_softseg.nii.gz => sub-milan07_rec-average_dwi_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mniPilot1/anat/{sub-mniPilot1_flip-1_mt-on_space-other_MTS_softseg.json => sub-mniPilot1_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-mniPilot1/anat/{sub-mniPilot1_flip-1_mt-on_space-other_MTS_softseg.nii.gz => sub-mniPilot1_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mniPilot1/anat/{sub-mniPilot1_flip-2_mt-off_space-other_MTS_softseg.json => sub-mniPilot1_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-mniPilot1/anat/{sub-mniPilot1_flip-2_mt-off_space-other_MTS_softseg.nii.gz => sub-mniPilot1_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mniPilot1/anat/{sub-mniPilot1_space-other_T1w_softseg.json => sub-mniPilot1_space-other_T1w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-mniPilot1/anat/{sub-mniPilot1_space-other_T1w_softseg.nii.gz => sub-mniPilot1_space-other_T1w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mniPilot1/anat/{sub-mniPilot1_space-other_T2star_softseg.json => sub-mniPilot1_space-other_T2star_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-mniPilot1/anat/{sub-mniPilot1_space-other_T2star_softseg.nii.gz => sub-mniPilot1_space-other_T2star_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mniPilot1/anat/{sub-mniPilot1_space-other_T2w_softseg.json => sub-mniPilot1_space-other_T2w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-mniPilot1/anat/{sub-mniPilot1_space-other_T2w_softseg.nii.gz => sub-mniPilot1_space-other_T2w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mniPilot1/dwi/{sub-mniPilot1_rec-average_dwi_softseg.json => sub-mniPilot1_rec-average_dwi_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-mniPilot1/dwi/{sub-mniPilot1_rec-average_dwi_softseg.nii.gz => sub-mniPilot1_rec-average_dwi_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mniS01/anat/{sub-mniS01_flip-1_mt-on_space-other_MTS_softseg.json => sub-mniS01_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-mniS01/anat/{sub-mniS01_flip-1_mt-on_space-other_MTS_softseg.nii.gz => sub-mniS01_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mniS01/anat/{sub-mniS01_flip-2_mt-off_space-other_MTS_softseg.json => sub-mniS01_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-mniS01/anat/{sub-mniS01_flip-2_mt-off_space-other_MTS_softseg.nii.gz => sub-mniS01_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mniS01/anat/{sub-mniS01_space-other_T1w_softseg.json => sub-mniS01_space-other_T1w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-mniS01/anat/{sub-mniS01_space-other_T1w_softseg.nii.gz => sub-mniS01_space-other_T1w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mniS01/anat/{sub-mniS01_space-other_T2star_softseg.json => sub-mniS01_space-other_T2star_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-mniS01/anat/{sub-mniS01_space-other_T2star_softseg.nii.gz => sub-mniS01_space-other_T2star_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mniS01/anat/{sub-mniS01_space-other_T2w_softseg.json => sub-mniS01_space-other_T2w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-mniS01/anat/{sub-mniS01_space-other_T2w_softseg.nii.gz => sub-mniS01_space-other_T2w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mniS01/dwi/{sub-mniS01_rec-average_dwi_softseg.json => sub-mniS01_rec-average_dwi_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-mniS01/dwi/{sub-mniS01_rec-average_dwi_softseg.nii.gz => sub-mniS01_rec-average_dwi_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mniS02/anat/{sub-mniS02_flip-1_mt-on_space-other_MTS_softseg.json => sub-mniS02_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-mniS02/anat/{sub-mniS02_flip-1_mt-on_space-other_MTS_softseg.nii.gz => sub-mniS02_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mniS02/anat/{sub-mniS02_flip-2_mt-off_space-other_MTS_softseg.json => sub-mniS02_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-mniS02/anat/{sub-mniS02_flip-2_mt-off_space-other_MTS_softseg.nii.gz => sub-mniS02_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mniS02/anat/{sub-mniS02_space-other_T1w_softseg.json => sub-mniS02_space-other_T1w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-mniS02/anat/{sub-mniS02_space-other_T1w_softseg.nii.gz => sub-mniS02_space-other_T1w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mniS02/anat/{sub-mniS02_space-other_T2star_softseg.json => sub-mniS02_space-other_T2star_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-mniS02/anat/{sub-mniS02_space-other_T2star_softseg.nii.gz => sub-mniS02_space-other_T2star_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mniS02/anat/{sub-mniS02_space-other_T2w_softseg.json => sub-mniS02_space-other_T2w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-mniS02/anat/{sub-mniS02_space-other_T2w_softseg.nii.gz => sub-mniS02_space-other_T2w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mniS02/dwi/{sub-mniS02_rec-average_dwi_softseg.json => sub-mniS02_rec-average_dwi_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-mniS02/dwi/{sub-mniS02_rec-average_dwi_softseg.nii.gz => sub-mniS02_rec-average_dwi_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mniS03/anat/{sub-mniS03_flip-1_mt-on_space-other_MTS_softseg.json => sub-mniS03_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-mniS03/anat/{sub-mniS03_flip-1_mt-on_space-other_MTS_softseg.nii.gz => sub-mniS03_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mniS03/anat/{sub-mniS03_flip-2_mt-off_space-other_MTS_softseg.json => sub-mniS03_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-mniS03/anat/{sub-mniS03_flip-2_mt-off_space-other_MTS_softseg.nii.gz => sub-mniS03_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mniS03/anat/{sub-mniS03_space-other_T1w_softseg.json => sub-mniS03_space-other_T1w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-mniS03/anat/{sub-mniS03_space-other_T1w_softseg.nii.gz => sub-mniS03_space-other_T1w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mniS03/anat/{sub-mniS03_space-other_T2star_softseg.json => sub-mniS03_space-other_T2star_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-mniS03/anat/{sub-mniS03_space-other_T2star_softseg.nii.gz => sub-mniS03_space-other_T2star_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mniS03/anat/{sub-mniS03_space-other_T2w_softseg.json => sub-mniS03_space-other_T2w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-mniS03/anat/{sub-mniS03_space-other_T2w_softseg.nii.gz => sub-mniS03_space-other_T2w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mniS03/dwi/{sub-mniS03_rec-average_dwi_softseg.json => sub-mniS03_rec-average_dwi_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-mniS03/dwi/{sub-mniS03_rec-average_dwi_softseg.nii.gz => sub-mniS03_rec-average_dwi_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mniS04/anat/{sub-mniS04_flip-1_mt-on_space-other_MTS_softseg.json => sub-mniS04_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-mniS04/anat/{sub-mniS04_flip-1_mt-on_space-other_MTS_softseg.nii.gz => sub-mniS04_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mniS04/anat/{sub-mniS04_flip-2_mt-off_space-other_MTS_softseg.json => sub-mniS04_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-mniS04/anat/{sub-mniS04_flip-2_mt-off_space-other_MTS_softseg.nii.gz => sub-mniS04_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mniS04/anat/{sub-mniS04_space-other_T1w_softseg.json => sub-mniS04_space-other_T1w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-mniS04/anat/{sub-mniS04_space-other_T1w_softseg.nii.gz => sub-mniS04_space-other_T1w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mniS04/anat/{sub-mniS04_space-other_T2star_softseg.json => sub-mniS04_space-other_T2star_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-mniS04/anat/{sub-mniS04_space-other_T2star_softseg.nii.gz => sub-mniS04_space-other_T2star_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mniS04/anat/{sub-mniS04_space-other_T2w_softseg.json => sub-mniS04_space-other_T2w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-mniS04/anat/{sub-mniS04_space-other_T2w_softseg.nii.gz => sub-mniS04_space-other_T2w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mniS04/dwi/{sub-mniS04_rec-average_dwi_softseg.json => sub-mniS04_rec-average_dwi_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-mniS04/dwi/{sub-mniS04_rec-average_dwi_softseg.nii.gz => sub-mniS04_rec-average_dwi_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mniS05/anat/{sub-mniS05_flip-1_mt-on_space-other_MTS_softseg.json => sub-mniS05_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-mniS05/anat/{sub-mniS05_flip-1_mt-on_space-other_MTS_softseg.nii.gz => sub-mniS05_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mniS05/anat/{sub-mniS05_flip-2_mt-off_space-other_MTS_softseg.json => sub-mniS05_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-mniS05/anat/{sub-mniS05_flip-2_mt-off_space-other_MTS_softseg.nii.gz => sub-mniS05_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mniS05/anat/{sub-mniS05_space-other_T1w_softseg.json => sub-mniS05_space-other_T1w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-mniS05/anat/{sub-mniS05_space-other_T1w_softseg.nii.gz => sub-mniS05_space-other_T1w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mniS05/anat/{sub-mniS05_space-other_T2star_softseg.json => sub-mniS05_space-other_T2star_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-mniS05/anat/{sub-mniS05_space-other_T2star_softseg.nii.gz => sub-mniS05_space-other_T2star_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mniS05/anat/{sub-mniS05_space-other_T2w_softseg.json => sub-mniS05_space-other_T2w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-mniS05/anat/{sub-mniS05_space-other_T2w_softseg.nii.gz => sub-mniS05_space-other_T2w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mniS05/dwi/{sub-mniS05_rec-average_dwi_softseg.json => sub-mniS05_rec-average_dwi_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-mniS05/dwi/{sub-mniS05_rec-average_dwi_softseg.nii.gz => sub-mniS05_rec-average_dwi_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mniS06/anat/{sub-mniS06_flip-1_mt-on_space-other_MTS_softseg.json => sub-mniS06_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-mniS06/anat/{sub-mniS06_flip-1_mt-on_space-other_MTS_softseg.nii.gz => sub-mniS06_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mniS06/anat/{sub-mniS06_flip-2_mt-off_space-other_MTS_softseg.json => sub-mniS06_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-mniS06/anat/{sub-mniS06_flip-2_mt-off_space-other_MTS_softseg.nii.gz => sub-mniS06_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mniS06/anat/{sub-mniS06_space-other_T1w_softseg.json => sub-mniS06_space-other_T1w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-mniS06/anat/{sub-mniS06_space-other_T1w_softseg.nii.gz => sub-mniS06_space-other_T1w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mniS06/anat/{sub-mniS06_space-other_T2star_softseg.json => sub-mniS06_space-other_T2star_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-mniS06/anat/{sub-mniS06_space-other_T2star_softseg.nii.gz => sub-mniS06_space-other_T2star_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mniS06/anat/{sub-mniS06_space-other_T2w_softseg.json => sub-mniS06_space-other_T2w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-mniS06/anat/{sub-mniS06_space-other_T2w_softseg.nii.gz => sub-mniS06_space-other_T2w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mniS06/dwi/{sub-mniS06_rec-average_dwi_softseg.json => sub-mniS06_rec-average_dwi_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-mniS06/dwi/{sub-mniS06_rec-average_dwi_softseg.nii.gz => sub-mniS06_rec-average_dwi_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mniS07/anat/{sub-mniS07_flip-1_mt-on_space-other_MTS_softseg.json => sub-mniS07_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-mniS07/anat/{sub-mniS07_flip-1_mt-on_space-other_MTS_softseg.nii.gz => sub-mniS07_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mniS07/anat/{sub-mniS07_flip-2_mt-off_space-other_MTS_softseg.json => sub-mniS07_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-mniS07/anat/{sub-mniS07_flip-2_mt-off_space-other_MTS_softseg.nii.gz => sub-mniS07_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mniS07/anat/{sub-mniS07_space-other_T1w_softseg.json => sub-mniS07_space-other_T1w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-mniS07/anat/{sub-mniS07_space-other_T1w_softseg.nii.gz => sub-mniS07_space-other_T1w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mniS07/anat/{sub-mniS07_space-other_T2star_softseg.json => sub-mniS07_space-other_T2star_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-mniS07/anat/{sub-mniS07_space-other_T2star_softseg.nii.gz => sub-mniS07_space-other_T2star_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mniS07/anat/{sub-mniS07_space-other_T2w_softseg.json => sub-mniS07_space-other_T2w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-mniS07/anat/{sub-mniS07_space-other_T2w_softseg.nii.gz => sub-mniS07_space-other_T2w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mniS07/dwi/{sub-mniS07_rec-average_dwi_softseg.json => sub-mniS07_rec-average_dwi_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-mniS07/dwi/{sub-mniS07_rec-average_dwi_softseg.nii.gz => sub-mniS07_rec-average_dwi_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mniS08/anat/{sub-mniS08_flip-1_mt-on_space-other_MTS_softseg.json => sub-mniS08_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-mniS08/anat/{sub-mniS08_flip-1_mt-on_space-other_MTS_softseg.nii.gz => sub-mniS08_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mniS08/anat/{sub-mniS08_flip-2_mt-off_space-other_MTS_softseg.json => sub-mniS08_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-mniS08/anat/{sub-mniS08_flip-2_mt-off_space-other_MTS_softseg.nii.gz => sub-mniS08_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mniS08/anat/{sub-mniS08_space-other_T1w_softseg.json => sub-mniS08_space-other_T1w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-mniS08/anat/{sub-mniS08_space-other_T1w_softseg.nii.gz => sub-mniS08_space-other_T1w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mniS08/anat/{sub-mniS08_space-other_T2star_softseg.json => sub-mniS08_space-other_T2star_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-mniS08/anat/{sub-mniS08_space-other_T2star_softseg.nii.gz => sub-mniS08_space-other_T2star_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mniS08/anat/{sub-mniS08_space-other_T2w_softseg.json => sub-mniS08_space-other_T2w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-mniS08/anat/{sub-mniS08_space-other_T2w_softseg.nii.gz => sub-mniS08_space-other_T2w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mniS08/dwi/{sub-mniS08_rec-average_dwi_softseg.json => sub-mniS08_rec-average_dwi_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-mniS08/dwi/{sub-mniS08_rec-average_dwi_softseg.nii.gz => sub-mniS08_rec-average_dwi_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mniS09/anat/{sub-mniS09_flip-1_mt-on_space-other_MTS_softseg.json => sub-mniS09_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-mniS09/anat/{sub-mniS09_flip-1_mt-on_space-other_MTS_softseg.nii.gz => sub-mniS09_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mniS09/anat/{sub-mniS09_flip-2_mt-off_space-other_MTS_softseg.json => sub-mniS09_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-mniS09/anat/{sub-mniS09_flip-2_mt-off_space-other_MTS_softseg.nii.gz => sub-mniS09_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mniS09/anat/{sub-mniS09_space-other_T1w_softseg.json => sub-mniS09_space-other_T1w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-mniS09/anat/{sub-mniS09_space-other_T1w_softseg.nii.gz => sub-mniS09_space-other_T1w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mniS09/anat/{sub-mniS09_space-other_T2star_softseg.json => sub-mniS09_space-other_T2star_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-mniS09/anat/{sub-mniS09_space-other_T2star_softseg.nii.gz => sub-mniS09_space-other_T2star_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mniS09/anat/{sub-mniS09_space-other_T2w_softseg.json => sub-mniS09_space-other_T2w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-mniS09/anat/{sub-mniS09_space-other_T2w_softseg.nii.gz => sub-mniS09_space-other_T2w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mniS09/dwi/{sub-mniS09_rec-average_dwi_softseg.json => sub-mniS09_rec-average_dwi_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-mniS09/dwi/{sub-mniS09_rec-average_dwi_softseg.nii.gz => sub-mniS09_rec-average_dwi_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mountSinai01/anat/{sub-mountSinai01_flip-1_mt-on_space-other_MTS_softseg.json => sub-mountSinai01_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-mountSinai01/anat/{sub-mountSinai01_flip-1_mt-on_space-other_MTS_softseg.nii.gz => sub-mountSinai01_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mountSinai01/anat/{sub-mountSinai01_flip-2_mt-off_space-other_MTS_softseg.json => sub-mountSinai01_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-mountSinai01/anat/{sub-mountSinai01_flip-2_mt-off_space-other_MTS_softseg.nii.gz => sub-mountSinai01_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mountSinai01/anat/{sub-mountSinai01_space-other_T1w_softseg.json => sub-mountSinai01_space-other_T1w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-mountSinai01/anat/{sub-mountSinai01_space-other_T1w_softseg.nii.gz => sub-mountSinai01_space-other_T1w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mountSinai01/anat/{sub-mountSinai01_space-other_T2star_softseg.json => sub-mountSinai01_space-other_T2star_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-mountSinai01/anat/{sub-mountSinai01_space-other_T2star_softseg.nii.gz => sub-mountSinai01_space-other_T2star_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mountSinai01/anat/{sub-mountSinai01_space-other_T2w_softseg.json => sub-mountSinai01_space-other_T2w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-mountSinai01/anat/{sub-mountSinai01_space-other_T2w_softseg.nii.gz => sub-mountSinai01_space-other_T2w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mountSinai01/dwi/{sub-mountSinai01_rec-average_dwi_softseg.json => sub-mountSinai01_rec-average_dwi_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-mountSinai01/dwi/{sub-mountSinai01_rec-average_dwi_softseg.nii.gz => sub-mountSinai01_rec-average_dwi_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mountSinai02/anat/{sub-mountSinai02_flip-1_mt-on_space-other_MTS_softseg.json => sub-mountSinai02_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-mountSinai02/anat/{sub-mountSinai02_flip-1_mt-on_space-other_MTS_softseg.nii.gz => sub-mountSinai02_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mountSinai02/anat/{sub-mountSinai02_flip-2_mt-off_space-other_MTS_softseg.json => sub-mountSinai02_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-mountSinai02/anat/{sub-mountSinai02_flip-2_mt-off_space-other_MTS_softseg.nii.gz => sub-mountSinai02_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mountSinai02/anat/{sub-mountSinai02_space-other_T1w_softseg.json => sub-mountSinai02_space-other_T1w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-mountSinai02/anat/{sub-mountSinai02_space-other_T1w_softseg.nii.gz => sub-mountSinai02_space-other_T1w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mountSinai02/anat/{sub-mountSinai02_space-other_T2star_softseg.json => sub-mountSinai02_space-other_T2star_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-mountSinai02/anat/{sub-mountSinai02_space-other_T2star_softseg.nii.gz => sub-mountSinai02_space-other_T2star_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mountSinai02/anat/{sub-mountSinai02_space-other_T2w_softseg.json => sub-mountSinai02_space-other_T2w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-mountSinai02/anat/{sub-mountSinai02_space-other_T2w_softseg.nii.gz => sub-mountSinai02_space-other_T2w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mountSinai02/dwi/{sub-mountSinai02_rec-average_dwi_softseg.json => sub-mountSinai02_rec-average_dwi_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-mountSinai02/dwi/{sub-mountSinai02_rec-average_dwi_softseg.nii.gz => sub-mountSinai02_rec-average_dwi_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mountSinai04/anat/{sub-mountSinai04_flip-1_mt-on_space-other_MTS_softseg.json => sub-mountSinai04_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-mountSinai04/anat/{sub-mountSinai04_flip-1_mt-on_space-other_MTS_softseg.nii.gz => sub-mountSinai04_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mountSinai04/anat/{sub-mountSinai04_flip-2_mt-off_space-other_MTS_softseg.json => sub-mountSinai04_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-mountSinai04/anat/{sub-mountSinai04_flip-2_mt-off_space-other_MTS_softseg.nii.gz => sub-mountSinai04_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mountSinai04/anat/{sub-mountSinai04_space-other_T1w_softseg.json => sub-mountSinai04_space-other_T1w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-mountSinai04/anat/{sub-mountSinai04_space-other_T1w_softseg.nii.gz => sub-mountSinai04_space-other_T1w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mountSinai04/anat/{sub-mountSinai04_space-other_T2star_softseg.json => sub-mountSinai04_space-other_T2star_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-mountSinai04/anat/{sub-mountSinai04_space-other_T2star_softseg.nii.gz => sub-mountSinai04_space-other_T2star_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mountSinai04/anat/{sub-mountSinai04_space-other_T2w_softseg.json => sub-mountSinai04_space-other_T2w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-mountSinai04/anat/{sub-mountSinai04_space-other_T2w_softseg.nii.gz => sub-mountSinai04_space-other_T2w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mountSinai04/dwi/{sub-mountSinai04_rec-average_dwi_softseg.json => sub-mountSinai04_rec-average_dwi_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-mountSinai04/dwi/{sub-mountSinai04_rec-average_dwi_softseg.nii.gz => sub-mountSinai04_rec-average_dwi_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mountSinai05/anat/{sub-mountSinai05_flip-1_mt-on_space-other_MTS_softseg.json => sub-mountSinai05_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-mountSinai05/anat/{sub-mountSinai05_flip-1_mt-on_space-other_MTS_softseg.nii.gz => sub-mountSinai05_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mountSinai05/anat/{sub-mountSinai05_flip-2_mt-off_space-other_MTS_softseg.json => sub-mountSinai05_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-mountSinai05/anat/{sub-mountSinai05_flip-2_mt-off_space-other_MTS_softseg.nii.gz => sub-mountSinai05_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mountSinai05/anat/{sub-mountSinai05_space-other_T1w_softseg.json => sub-mountSinai05_space-other_T1w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-mountSinai05/anat/{sub-mountSinai05_space-other_T1w_softseg.nii.gz => sub-mountSinai05_space-other_T1w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mountSinai05/anat/{sub-mountSinai05_space-other_T2star_softseg.json => sub-mountSinai05_space-other_T2star_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-mountSinai05/anat/{sub-mountSinai05_space-other_T2star_softseg.nii.gz => sub-mountSinai05_space-other_T2star_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mountSinai05/anat/{sub-mountSinai05_space-other_T2w_softseg.json => sub-mountSinai05_space-other_T2w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-mountSinai05/anat/{sub-mountSinai05_space-other_T2w_softseg.nii.gz => sub-mountSinai05_space-other_T2w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mountSinai05/dwi/{sub-mountSinai05_rec-average_dwi_softseg.json => sub-mountSinai05_rec-average_dwi_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-mountSinai05/dwi/{sub-mountSinai05_rec-average_dwi_softseg.nii.gz => sub-mountSinai05_rec-average_dwi_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mountSinai06/anat/{sub-mountSinai06_flip-1_mt-on_space-other_MTS_softseg.json => sub-mountSinai06_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-mountSinai06/anat/{sub-mountSinai06_flip-1_mt-on_space-other_MTS_softseg.nii.gz => sub-mountSinai06_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mountSinai06/anat/{sub-mountSinai06_flip-2_mt-off_space-other_MTS_softseg.json => sub-mountSinai06_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-mountSinai06/anat/{sub-mountSinai06_flip-2_mt-off_space-other_MTS_softseg.nii.gz => sub-mountSinai06_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mountSinai06/anat/{sub-mountSinai06_space-other_T1w_softseg.json => sub-mountSinai06_space-other_T1w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-mountSinai06/anat/{sub-mountSinai06_space-other_T1w_softseg.nii.gz => sub-mountSinai06_space-other_T1w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mountSinai06/anat/{sub-mountSinai06_space-other_T2star_softseg.json => sub-mountSinai06_space-other_T2star_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-mountSinai06/anat/{sub-mountSinai06_space-other_T2star_softseg.nii.gz => sub-mountSinai06_space-other_T2star_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mountSinai06/anat/{sub-mountSinai06_space-other_T2w_softseg.json => sub-mountSinai06_space-other_T2w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-mountSinai06/anat/{sub-mountSinai06_space-other_T2w_softseg.nii.gz => sub-mountSinai06_space-other_T2w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mountSinai06/dwi/{sub-mountSinai06_rec-average_dwi_softseg.json => sub-mountSinai06_rec-average_dwi_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-mountSinai06/dwi/{sub-mountSinai06_rec-average_dwi_softseg.nii.gz => sub-mountSinai06_rec-average_dwi_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mpicbs01/anat/{sub-mpicbs01_flip-1_mt-on_space-other_MTS_softseg.json => sub-mpicbs01_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-mpicbs01/anat/{sub-mpicbs01_flip-1_mt-on_space-other_MTS_softseg.nii.gz => sub-mpicbs01_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mpicbs01/anat/{sub-mpicbs01_flip-2_mt-off_space-other_MTS_softseg.json => sub-mpicbs01_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-mpicbs01/anat/{sub-mpicbs01_flip-2_mt-off_space-other_MTS_softseg.nii.gz => sub-mpicbs01_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mpicbs01/anat/{sub-mpicbs01_space-other_T1w_softseg.json => sub-mpicbs01_space-other_T1w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-mpicbs01/anat/{sub-mpicbs01_space-other_T1w_softseg.nii.gz => sub-mpicbs01_space-other_T1w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mpicbs01/anat/{sub-mpicbs01_space-other_T2star_softseg.json => sub-mpicbs01_space-other_T2star_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-mpicbs01/anat/{sub-mpicbs01_space-other_T2star_softseg.nii.gz => sub-mpicbs01_space-other_T2star_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mpicbs01/anat/{sub-mpicbs01_space-other_T2w_softseg.json => sub-mpicbs01_space-other_T2w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-mpicbs01/anat/{sub-mpicbs01_space-other_T2w_softseg.nii.gz => sub-mpicbs01_space-other_T2w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mpicbs01/dwi/{sub-mpicbs01_rec-average_dwi_softseg.json => sub-mpicbs01_rec-average_dwi_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-mpicbs01/dwi/{sub-mpicbs01_rec-average_dwi_softseg.nii.gz => sub-mpicbs01_rec-average_dwi_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mpicbs02/anat/{sub-mpicbs02_flip-1_mt-on_space-other_MTS_softseg.json => sub-mpicbs02_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-mpicbs02/anat/{sub-mpicbs02_flip-1_mt-on_space-other_MTS_softseg.nii.gz => sub-mpicbs02_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mpicbs02/anat/{sub-mpicbs02_flip-2_mt-off_space-other_MTS_softseg.json => sub-mpicbs02_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-mpicbs02/anat/{sub-mpicbs02_flip-2_mt-off_space-other_MTS_softseg.nii.gz => sub-mpicbs02_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mpicbs02/anat/{sub-mpicbs02_space-other_T1w_softseg.json => sub-mpicbs02_space-other_T1w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-mpicbs02/anat/{sub-mpicbs02_space-other_T1w_softseg.nii.gz => sub-mpicbs02_space-other_T1w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mpicbs02/anat/{sub-mpicbs02_space-other_T2star_softseg.json => sub-mpicbs02_space-other_T2star_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-mpicbs02/anat/{sub-mpicbs02_space-other_T2star_softseg.nii.gz => sub-mpicbs02_space-other_T2star_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mpicbs02/anat/{sub-mpicbs02_space-other_T2w_softseg.json => sub-mpicbs02_space-other_T2w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-mpicbs02/anat/{sub-mpicbs02_space-other_T2w_softseg.nii.gz => sub-mpicbs02_space-other_T2w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mpicbs02/dwi/{sub-mpicbs02_rec-average_dwi_softseg.json => sub-mpicbs02_rec-average_dwi_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-mpicbs02/dwi/{sub-mpicbs02_rec-average_dwi_softseg.nii.gz => sub-mpicbs02_rec-average_dwi_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mpicbs03/anat/{sub-mpicbs03_flip-1_mt-on_space-other_MTS_softseg.json => sub-mpicbs03_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-mpicbs03/anat/{sub-mpicbs03_flip-1_mt-on_space-other_MTS_softseg.nii.gz => sub-mpicbs03_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mpicbs03/anat/{sub-mpicbs03_flip-2_mt-off_space-other_MTS_softseg.json => sub-mpicbs03_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-mpicbs03/anat/{sub-mpicbs03_flip-2_mt-off_space-other_MTS_softseg.nii.gz => sub-mpicbs03_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mpicbs03/anat/{sub-mpicbs03_space-other_T1w_softseg.json => sub-mpicbs03_space-other_T1w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-mpicbs03/anat/{sub-mpicbs03_space-other_T1w_softseg.nii.gz => sub-mpicbs03_space-other_T1w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mpicbs03/anat/{sub-mpicbs03_space-other_T2star_softseg.json => sub-mpicbs03_space-other_T2star_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-mpicbs03/anat/{sub-mpicbs03_space-other_T2star_softseg.nii.gz => sub-mpicbs03_space-other_T2star_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mpicbs03/anat/{sub-mpicbs03_space-other_T2w_softseg.json => sub-mpicbs03_space-other_T2w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-mpicbs03/anat/{sub-mpicbs03_space-other_T2w_softseg.nii.gz => sub-mpicbs03_space-other_T2w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mpicbs03/dwi/{sub-mpicbs03_rec-average_dwi_softseg.json => sub-mpicbs03_rec-average_dwi_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-mpicbs03/dwi/{sub-mpicbs03_rec-average_dwi_softseg.nii.gz => sub-mpicbs03_rec-average_dwi_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mpicbs05/anat/{sub-mpicbs05_flip-1_mt-on_space-other_MTS_softseg.json => sub-mpicbs05_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-mpicbs05/anat/{sub-mpicbs05_flip-1_mt-on_space-other_MTS_softseg.nii.gz => sub-mpicbs05_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mpicbs05/anat/{sub-mpicbs05_flip-2_mt-off_space-other_MTS_softseg.json => sub-mpicbs05_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-mpicbs05/anat/{sub-mpicbs05_flip-2_mt-off_space-other_MTS_softseg.nii.gz => sub-mpicbs05_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mpicbs05/anat/{sub-mpicbs05_space-other_T1w_softseg.json => sub-mpicbs05_space-other_T1w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-mpicbs05/anat/{sub-mpicbs05_space-other_T1w_softseg.nii.gz => sub-mpicbs05_space-other_T1w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mpicbs05/anat/{sub-mpicbs05_space-other_T2star_softseg.json => sub-mpicbs05_space-other_T2star_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-mpicbs05/anat/{sub-mpicbs05_space-other_T2star_softseg.nii.gz => sub-mpicbs05_space-other_T2star_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mpicbs05/anat/{sub-mpicbs05_space-other_T2w_softseg.json => sub-mpicbs05_space-other_T2w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-mpicbs05/anat/{sub-mpicbs05_space-other_T2w_softseg.nii.gz => sub-mpicbs05_space-other_T2w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mpicbs05/dwi/{sub-mpicbs05_rec-average_dwi_softseg.json => sub-mpicbs05_rec-average_dwi_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-mpicbs05/dwi/{sub-mpicbs05_rec-average_dwi_softseg.nii.gz => sub-mpicbs05_rec-average_dwi_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mpicbs06/anat/{sub-mpicbs06_flip-1_mt-on_space-other_MTS_softseg.json => sub-mpicbs06_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-mpicbs06/anat/{sub-mpicbs06_flip-1_mt-on_space-other_MTS_softseg.nii.gz => sub-mpicbs06_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mpicbs06/anat/{sub-mpicbs06_flip-2_mt-off_space-other_MTS_softseg.json => sub-mpicbs06_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-mpicbs06/anat/{sub-mpicbs06_flip-2_mt-off_space-other_MTS_softseg.nii.gz => sub-mpicbs06_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mpicbs06/anat/{sub-mpicbs06_space-other_T1w_softseg.json => sub-mpicbs06_space-other_T1w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-mpicbs06/anat/{sub-mpicbs06_space-other_T1w_softseg.nii.gz => sub-mpicbs06_space-other_T1w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mpicbs06/anat/{sub-mpicbs06_space-other_T2star_softseg.json => sub-mpicbs06_space-other_T2star_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-mpicbs06/anat/{sub-mpicbs06_space-other_T2star_softseg.nii.gz => sub-mpicbs06_space-other_T2star_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mpicbs06/anat/{sub-mpicbs06_space-other_T2w_softseg.json => sub-mpicbs06_space-other_T2w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-mpicbs06/anat/{sub-mpicbs06_space-other_T2w_softseg.nii.gz => sub-mpicbs06_space-other_T2w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mpicbs06/dwi/{sub-mpicbs06_rec-average_dwi_softseg.json => sub-mpicbs06_rec-average_dwi_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-mpicbs06/dwi/{sub-mpicbs06_rec-average_dwi_softseg.nii.gz => sub-mpicbs06_rec-average_dwi_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mpicbs07/anat/{sub-mpicbs07_flip-1_mt-on_space-other_MTS_softseg.json => sub-mpicbs07_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-mpicbs07/anat/{sub-mpicbs07_flip-1_mt-on_space-other_MTS_softseg.nii.gz => sub-mpicbs07_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mpicbs07/anat/{sub-mpicbs07_flip-2_mt-off_space-other_MTS_softseg.json => sub-mpicbs07_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-mpicbs07/anat/{sub-mpicbs07_flip-2_mt-off_space-other_MTS_softseg.nii.gz => sub-mpicbs07_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mpicbs07/anat/{sub-mpicbs07_space-other_T1w_softseg.json => sub-mpicbs07_space-other_T1w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-mpicbs07/anat/{sub-mpicbs07_space-other_T1w_softseg.nii.gz => sub-mpicbs07_space-other_T1w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mpicbs07/anat/{sub-mpicbs07_space-other_T2star_softseg.json => sub-mpicbs07_space-other_T2star_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-mpicbs07/anat/{sub-mpicbs07_space-other_T2star_softseg.nii.gz => sub-mpicbs07_space-other_T2star_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mpicbs07/anat/{sub-mpicbs07_space-other_T2w_softseg.json => sub-mpicbs07_space-other_T2w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-mpicbs07/anat/{sub-mpicbs07_space-other_T2w_softseg.nii.gz => sub-mpicbs07_space-other_T2w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-mpicbs07/dwi/{sub-mpicbs07_rec-average_dwi_softseg.json => sub-mpicbs07_rec-average_dwi_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-mpicbs07/dwi/{sub-mpicbs07_rec-average_dwi_softseg.nii.gz => sub-mpicbs07_rec-average_dwi_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-nottwil01/anat/{sub-nottwil01_flip-1_mt-on_space-other_MTS_softseg.json => sub-nottwil01_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-nottwil01/anat/{sub-nottwil01_flip-1_mt-on_space-other_MTS_softseg.nii.gz => sub-nottwil01_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-nottwil01/anat/{sub-nottwil01_flip-2_mt-off_space-other_MTS_softseg.json => sub-nottwil01_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-nottwil01/anat/{sub-nottwil01_flip-2_mt-off_space-other_MTS_softseg.nii.gz => sub-nottwil01_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-nottwil01/anat/{sub-nottwil01_space-other_T1w_softseg.json => sub-nottwil01_space-other_T1w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-nottwil01/anat/{sub-nottwil01_space-other_T1w_softseg.nii.gz => sub-nottwil01_space-other_T1w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-nottwil01/anat/{sub-nottwil01_space-other_T2star_softseg.json => sub-nottwil01_space-other_T2star_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-nottwil01/anat/{sub-nottwil01_space-other_T2star_softseg.nii.gz => sub-nottwil01_space-other_T2star_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-nottwil01/anat/{sub-nottwil01_space-other_T2w_softseg.json => sub-nottwil01_space-other_T2w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-nottwil01/anat/{sub-nottwil01_space-other_T2w_softseg.nii.gz => sub-nottwil01_space-other_T2w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-nottwil01/dwi/{sub-nottwil01_rec-average_dwi_softseg.json => sub-nottwil01_rec-average_dwi_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-nottwil01/dwi/{sub-nottwil01_rec-average_dwi_softseg.nii.gz => sub-nottwil01_rec-average_dwi_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-nottwil02/anat/{sub-nottwil02_flip-1_mt-on_space-other_MTS_softseg.json => sub-nottwil02_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-nottwil02/anat/{sub-nottwil02_flip-1_mt-on_space-other_MTS_softseg.nii.gz => sub-nottwil02_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-nottwil02/anat/{sub-nottwil02_flip-2_mt-off_space-other_MTS_softseg.json => sub-nottwil02_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-nottwil02/anat/{sub-nottwil02_flip-2_mt-off_space-other_MTS_softseg.nii.gz => sub-nottwil02_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-nottwil02/anat/{sub-nottwil02_space-other_T1w_softseg.json => sub-nottwil02_space-other_T1w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-nottwil02/anat/{sub-nottwil02_space-other_T1w_softseg.nii.gz => sub-nottwil02_space-other_T1w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-nottwil02/anat/{sub-nottwil02_space-other_T2star_softseg.json => sub-nottwil02_space-other_T2star_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-nottwil02/anat/{sub-nottwil02_space-other_T2star_softseg.nii.gz => sub-nottwil02_space-other_T2star_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-nottwil02/anat/{sub-nottwil02_space-other_T2w_softseg.json => sub-nottwil02_space-other_T2w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-nottwil02/anat/{sub-nottwil02_space-other_T2w_softseg.nii.gz => sub-nottwil02_space-other_T2w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-nottwil02/dwi/{sub-nottwil02_rec-average_dwi_softseg.json => sub-nottwil02_rec-average_dwi_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-nottwil02/dwi/{sub-nottwil02_rec-average_dwi_softseg.nii.gz => sub-nottwil02_rec-average_dwi_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-nottwil03/anat/{sub-nottwil03_flip-1_mt-on_space-other_MTS_softseg.json => sub-nottwil03_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-nottwil03/anat/{sub-nottwil03_flip-1_mt-on_space-other_MTS_softseg.nii.gz => sub-nottwil03_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-nottwil03/anat/{sub-nottwil03_flip-2_mt-off_space-other_MTS_softseg.json => sub-nottwil03_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-nottwil03/anat/{sub-nottwil03_flip-2_mt-off_space-other_MTS_softseg.nii.gz => sub-nottwil03_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-nottwil03/anat/{sub-nottwil03_space-other_T1w_softseg.json => sub-nottwil03_space-other_T1w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-nottwil03/anat/{sub-nottwil03_space-other_T1w_softseg.nii.gz => sub-nottwil03_space-other_T1w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-nottwil03/anat/{sub-nottwil03_space-other_T2star_softseg.json => sub-nottwil03_space-other_T2star_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-nottwil03/anat/{sub-nottwil03_space-other_T2star_softseg.nii.gz => sub-nottwil03_space-other_T2star_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-nottwil03/anat/{sub-nottwil03_space-other_T2w_softseg.json => sub-nottwil03_space-other_T2w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-nottwil03/anat/{sub-nottwil03_space-other_T2w_softseg.nii.gz => sub-nottwil03_space-other_T2w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-nottwil03/dwi/{sub-nottwil03_rec-average_dwi_softseg.json => sub-nottwil03_rec-average_dwi_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-nottwil03/dwi/{sub-nottwil03_rec-average_dwi_softseg.nii.gz => sub-nottwil03_rec-average_dwi_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-nottwil04/anat/{sub-nottwil04_flip-1_mt-on_space-other_MTS_softseg.json => sub-nottwil04_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-nottwil04/anat/{sub-nottwil04_flip-1_mt-on_space-other_MTS_softseg.nii.gz => sub-nottwil04_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-nottwil04/anat/{sub-nottwil04_flip-2_mt-off_space-other_MTS_softseg.json => sub-nottwil04_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-nottwil04/anat/{sub-nottwil04_flip-2_mt-off_space-other_MTS_softseg.nii.gz => sub-nottwil04_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-nottwil04/anat/{sub-nottwil04_space-other_T1w_softseg.json => sub-nottwil04_space-other_T1w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-nottwil04/anat/{sub-nottwil04_space-other_T1w_softseg.nii.gz => sub-nottwil04_space-other_T1w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-nottwil04/anat/{sub-nottwil04_space-other_T2star_softseg.json => sub-nottwil04_space-other_T2star_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-nottwil04/anat/{sub-nottwil04_space-other_T2star_softseg.nii.gz => sub-nottwil04_space-other_T2star_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-nottwil04/anat/{sub-nottwil04_space-other_T2w_softseg.json => sub-nottwil04_space-other_T2w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-nottwil04/anat/{sub-nottwil04_space-other_T2w_softseg.nii.gz => sub-nottwil04_space-other_T2w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-nottwil04/dwi/{sub-nottwil04_rec-average_dwi_softseg.json => sub-nottwil04_rec-average_dwi_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-nottwil04/dwi/{sub-nottwil04_rec-average_dwi_softseg.nii.gz => sub-nottwil04_rec-average_dwi_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-nottwil05/anat/{sub-nottwil05_flip-1_mt-on_space-other_MTS_softseg.json => sub-nottwil05_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-nottwil05/anat/{sub-nottwil05_flip-1_mt-on_space-other_MTS_softseg.nii.gz => sub-nottwil05_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-nottwil05/anat/{sub-nottwil05_flip-2_mt-off_space-other_MTS_softseg.json => sub-nottwil05_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-nottwil05/anat/{sub-nottwil05_flip-2_mt-off_space-other_MTS_softseg.nii.gz => sub-nottwil05_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-nottwil05/anat/{sub-nottwil05_space-other_T1w_softseg.json => sub-nottwil05_space-other_T1w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-nottwil05/anat/{sub-nottwil05_space-other_T1w_softseg.nii.gz => sub-nottwil05_space-other_T1w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-nottwil05/anat/{sub-nottwil05_space-other_T2star_softseg.json => sub-nottwil05_space-other_T2star_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-nottwil05/anat/{sub-nottwil05_space-other_T2star_softseg.nii.gz => sub-nottwil05_space-other_T2star_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-nottwil05/anat/{sub-nottwil05_space-other_T2w_softseg.json => sub-nottwil05_space-other_T2w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-nottwil05/anat/{sub-nottwil05_space-other_T2w_softseg.nii.gz => sub-nottwil05_space-other_T2w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-nottwil05/dwi/{sub-nottwil05_rec-average_dwi_softseg.json => sub-nottwil05_rec-average_dwi_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-nottwil05/dwi/{sub-nottwil05_rec-average_dwi_softseg.nii.gz => sub-nottwil05_rec-average_dwi_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-nottwil06/anat/{sub-nottwil06_flip-1_mt-on_space-other_MTS_softseg.json => sub-nottwil06_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-nottwil06/anat/{sub-nottwil06_flip-1_mt-on_space-other_MTS_softseg.nii.gz => sub-nottwil06_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-nottwil06/anat/{sub-nottwil06_flip-2_mt-off_space-other_MTS_softseg.json => sub-nottwil06_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-nottwil06/anat/{sub-nottwil06_flip-2_mt-off_space-other_MTS_softseg.nii.gz => sub-nottwil06_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-nottwil06/anat/{sub-nottwil06_space-other_T1w_softseg.json => sub-nottwil06_space-other_T1w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-nottwil06/anat/{sub-nottwil06_space-other_T1w_softseg.nii.gz => sub-nottwil06_space-other_T1w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-nottwil06/anat/{sub-nottwil06_space-other_T2star_softseg.json => sub-nottwil06_space-other_T2star_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-nottwil06/anat/{sub-nottwil06_space-other_T2star_softseg.nii.gz => sub-nottwil06_space-other_T2star_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-nottwil06/anat/{sub-nottwil06_space-other_T2w_softseg.json => sub-nottwil06_space-other_T2w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-nottwil06/anat/{sub-nottwil06_space-other_T2w_softseg.nii.gz => sub-nottwil06_space-other_T2w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-nottwil06/dwi/{sub-nottwil06_rec-average_dwi_softseg.json => sub-nottwil06_rec-average_dwi_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-nottwil06/dwi/{sub-nottwil06_rec-average_dwi_softseg.nii.gz => sub-nottwil06_rec-average_dwi_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-nwu01/anat/{sub-nwu01_flip-1_mt-on_space-other_MTS_softseg.json => sub-nwu01_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-nwu01/anat/{sub-nwu01_flip-1_mt-on_space-other_MTS_softseg.nii.gz => sub-nwu01_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-nwu01/anat/{sub-nwu01_flip-2_mt-off_space-other_MTS_softseg.json => sub-nwu01_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-nwu01/anat/{sub-nwu01_flip-2_mt-off_space-other_MTS_softseg.nii.gz => sub-nwu01_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-nwu01/anat/{sub-nwu01_space-other_T1w_softseg.json => sub-nwu01_space-other_T1w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-nwu01/anat/{sub-nwu01_space-other_T1w_softseg.nii.gz => sub-nwu01_space-other_T1w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-nwu01/anat/{sub-nwu01_space-other_T2star_softseg.json => sub-nwu01_space-other_T2star_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-nwu01/anat/{sub-nwu01_space-other_T2star_softseg.nii.gz => sub-nwu01_space-other_T2star_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-nwu01/anat/{sub-nwu01_space-other_T2w_softseg.json => sub-nwu01_space-other_T2w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-nwu01/anat/{sub-nwu01_space-other_T2w_softseg.nii.gz => sub-nwu01_space-other_T2w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-nwu01/dwi/{sub-nwu01_rec-average_dwi_softseg.json => sub-nwu01_rec-average_dwi_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-nwu01/dwi/{sub-nwu01_rec-average_dwi_softseg.nii.gz => sub-nwu01_rec-average_dwi_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-nwu02/anat/{sub-nwu02_flip-1_mt-on_space-other_MTS_softseg.json => sub-nwu02_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-nwu02/anat/{sub-nwu02_flip-1_mt-on_space-other_MTS_softseg.nii.gz => sub-nwu02_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-nwu02/anat/{sub-nwu02_flip-2_mt-off_space-other_MTS_softseg.json => sub-nwu02_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-nwu02/anat/{sub-nwu02_flip-2_mt-off_space-other_MTS_softseg.nii.gz => sub-nwu02_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-nwu02/anat/{sub-nwu02_space-other_T1w_softseg.json => sub-nwu02_space-other_T1w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-nwu02/anat/{sub-nwu02_space-other_T1w_softseg.nii.gz => sub-nwu02_space-other_T1w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-nwu02/anat/{sub-nwu02_space-other_T2star_softseg.json => sub-nwu02_space-other_T2star_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-nwu02/anat/{sub-nwu02_space-other_T2star_softseg.nii.gz => sub-nwu02_space-other_T2star_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-nwu02/anat/{sub-nwu02_space-other_T2w_softseg.json => sub-nwu02_space-other_T2w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-nwu02/anat/{sub-nwu02_space-other_T2w_softseg.nii.gz => sub-nwu02_space-other_T2w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-nwu02/dwi/{sub-nwu02_rec-average_dwi_softseg.json => sub-nwu02_rec-average_dwi_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-nwu02/dwi/{sub-nwu02_rec-average_dwi_softseg.nii.gz => sub-nwu02_rec-average_dwi_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-nwu03/anat/{sub-nwu03_flip-1_mt-on_space-other_MTS_softseg.json => sub-nwu03_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-nwu03/anat/{sub-nwu03_flip-1_mt-on_space-other_MTS_softseg.nii.gz => sub-nwu03_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-nwu03/anat/{sub-nwu03_flip-2_mt-off_space-other_MTS_softseg.json => sub-nwu03_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-nwu03/anat/{sub-nwu03_flip-2_mt-off_space-other_MTS_softseg.nii.gz => sub-nwu03_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-nwu03/anat/{sub-nwu03_space-other_T1w_softseg.json => sub-nwu03_space-other_T1w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-nwu03/anat/{sub-nwu03_space-other_T1w_softseg.nii.gz => sub-nwu03_space-other_T1w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-nwu03/anat/{sub-nwu03_space-other_T2star_softseg.json => sub-nwu03_space-other_T2star_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-nwu03/anat/{sub-nwu03_space-other_T2star_softseg.nii.gz => sub-nwu03_space-other_T2star_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-nwu03/anat/{sub-nwu03_space-other_T2w_softseg.json => sub-nwu03_space-other_T2w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-nwu03/anat/{sub-nwu03_space-other_T2w_softseg.nii.gz => sub-nwu03_space-other_T2w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-nwu03/dwi/{sub-nwu03_rec-average_dwi_softseg.json => sub-nwu03_rec-average_dwi_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-nwu03/dwi/{sub-nwu03_rec-average_dwi_softseg.nii.gz => sub-nwu03_rec-average_dwi_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-nwu04/anat/{sub-nwu04_flip-1_mt-on_space-other_MTS_softseg.json => sub-nwu04_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-nwu04/anat/{sub-nwu04_flip-1_mt-on_space-other_MTS_softseg.nii.gz => sub-nwu04_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-nwu04/anat/{sub-nwu04_flip-2_mt-off_space-other_MTS_softseg.json => sub-nwu04_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-nwu04/anat/{sub-nwu04_flip-2_mt-off_space-other_MTS_softseg.nii.gz => sub-nwu04_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-nwu04/anat/{sub-nwu04_space-other_T1w_softseg.json => sub-nwu04_space-other_T1w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-nwu04/anat/{sub-nwu04_space-other_T1w_softseg.nii.gz => sub-nwu04_space-other_T1w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-nwu04/anat/{sub-nwu04_space-other_T2star_softseg.json => sub-nwu04_space-other_T2star_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-nwu04/anat/{sub-nwu04_space-other_T2star_softseg.nii.gz => sub-nwu04_space-other_T2star_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-nwu04/anat/{sub-nwu04_space-other_T2w_softseg.json => sub-nwu04_space-other_T2w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-nwu04/anat/{sub-nwu04_space-other_T2w_softseg.nii.gz => sub-nwu04_space-other_T2w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-nwu04/dwi/{sub-nwu04_rec-average_dwi_softseg.json => sub-nwu04_rec-average_dwi_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-nwu04/dwi/{sub-nwu04_rec-average_dwi_softseg.nii.gz => sub-nwu04_rec-average_dwi_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-nwu05/anat/{sub-nwu05_flip-1_mt-on_space-other_MTS_softseg.json => sub-nwu05_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-nwu05/anat/{sub-nwu05_flip-1_mt-on_space-other_MTS_softseg.nii.gz => sub-nwu05_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-nwu05/anat/{sub-nwu05_flip-2_mt-off_space-other_MTS_softseg.json => sub-nwu05_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-nwu05/anat/{sub-nwu05_flip-2_mt-off_space-other_MTS_softseg.nii.gz => sub-nwu05_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-nwu05/anat/{sub-nwu05_space-other_T1w_softseg.json => sub-nwu05_space-other_T1w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-nwu05/anat/{sub-nwu05_space-other_T1w_softseg.nii.gz => sub-nwu05_space-other_T1w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-nwu05/anat/{sub-nwu05_space-other_T2star_softseg.json => sub-nwu05_space-other_T2star_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-nwu05/anat/{sub-nwu05_space-other_T2star_softseg.nii.gz => sub-nwu05_space-other_T2star_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-nwu05/anat/{sub-nwu05_space-other_T2w_softseg.json => sub-nwu05_space-other_T2w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-nwu05/anat/{sub-nwu05_space-other_T2w_softseg.nii.gz => sub-nwu05_space-other_T2w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-nwu05/dwi/{sub-nwu05_rec-average_dwi_softseg.json => sub-nwu05_rec-average_dwi_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-nwu05/dwi/{sub-nwu05_rec-average_dwi_softseg.nii.gz => sub-nwu05_rec-average_dwi_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-nwu06/anat/{sub-nwu06_flip-1_mt-on_space-other_MTS_softseg.json => sub-nwu06_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-nwu06/anat/{sub-nwu06_flip-1_mt-on_space-other_MTS_softseg.nii.gz => sub-nwu06_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-nwu06/anat/{sub-nwu06_flip-2_mt-off_space-other_MTS_softseg.json => sub-nwu06_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-nwu06/anat/{sub-nwu06_flip-2_mt-off_space-other_MTS_softseg.nii.gz => sub-nwu06_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-nwu06/anat/{sub-nwu06_space-other_T1w_softseg.json => sub-nwu06_space-other_T1w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-nwu06/anat/{sub-nwu06_space-other_T1w_softseg.nii.gz => sub-nwu06_space-other_T1w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-nwu06/anat/{sub-nwu06_space-other_T2star_softseg.json => sub-nwu06_space-other_T2star_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-nwu06/anat/{sub-nwu06_space-other_T2star_softseg.nii.gz => sub-nwu06_space-other_T2star_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-nwu06/anat/{sub-nwu06_space-other_T2w_softseg.json => sub-nwu06_space-other_T2w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-nwu06/anat/{sub-nwu06_space-other_T2w_softseg.nii.gz => sub-nwu06_space-other_T2w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-nwu06/dwi/{sub-nwu06_rec-average_dwi_softseg.json => sub-nwu06_rec-average_dwi_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-nwu06/dwi/{sub-nwu06_rec-average_dwi_softseg.nii.gz => sub-nwu06_rec-average_dwi_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-oxfordFmrib02/anat/{sub-oxfordFmrib02_flip-1_mt-on_space-other_MTS_softseg.json => sub-oxfordFmrib02_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-oxfordFmrib02/anat/{sub-oxfordFmrib02_flip-1_mt-on_space-other_MTS_softseg.nii.gz => sub-oxfordFmrib02_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-oxfordFmrib02/anat/{sub-oxfordFmrib02_flip-2_mt-off_space-other_MTS_softseg.json => sub-oxfordFmrib02_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-oxfordFmrib02/anat/{sub-oxfordFmrib02_flip-2_mt-off_space-other_MTS_softseg.nii.gz => sub-oxfordFmrib02_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-oxfordFmrib02/anat/{sub-oxfordFmrib02_space-other_T1w_softseg.json => sub-oxfordFmrib02_space-other_T1w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-oxfordFmrib02/anat/{sub-oxfordFmrib02_space-other_T1w_softseg.nii.gz => sub-oxfordFmrib02_space-other_T1w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-oxfordFmrib02/anat/{sub-oxfordFmrib02_space-other_T2star_softseg.json => sub-oxfordFmrib02_space-other_T2star_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-oxfordFmrib02/anat/{sub-oxfordFmrib02_space-other_T2star_softseg.nii.gz => sub-oxfordFmrib02_space-other_T2star_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-oxfordFmrib02/anat/{sub-oxfordFmrib02_space-other_T2w_softseg.json => sub-oxfordFmrib02_space-other_T2w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-oxfordFmrib02/anat/{sub-oxfordFmrib02_space-other_T2w_softseg.nii.gz => sub-oxfordFmrib02_space-other_T2w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-oxfordFmrib02/dwi/{sub-oxfordFmrib02_rec-average_dwi_softseg.json => sub-oxfordFmrib02_rec-average_dwi_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-oxfordFmrib02/dwi/{sub-oxfordFmrib02_rec-average_dwi_softseg.nii.gz => sub-oxfordFmrib02_rec-average_dwi_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-oxfordFmrib03/anat/{sub-oxfordFmrib03_flip-1_mt-on_space-other_MTS_softseg.json => sub-oxfordFmrib03_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-oxfordFmrib03/anat/{sub-oxfordFmrib03_flip-1_mt-on_space-other_MTS_softseg.nii.gz => sub-oxfordFmrib03_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-oxfordFmrib03/anat/{sub-oxfordFmrib03_flip-2_mt-off_space-other_MTS_softseg.json => sub-oxfordFmrib03_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-oxfordFmrib03/anat/{sub-oxfordFmrib03_flip-2_mt-off_space-other_MTS_softseg.nii.gz => sub-oxfordFmrib03_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-oxfordFmrib03/anat/{sub-oxfordFmrib03_space-other_T1w_softseg.json => sub-oxfordFmrib03_space-other_T1w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-oxfordFmrib03/anat/{sub-oxfordFmrib03_space-other_T1w_softseg.nii.gz => sub-oxfordFmrib03_space-other_T1w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-oxfordFmrib03/anat/{sub-oxfordFmrib03_space-other_T2star_softseg.json => sub-oxfordFmrib03_space-other_T2star_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-oxfordFmrib03/anat/{sub-oxfordFmrib03_space-other_T2star_softseg.nii.gz => sub-oxfordFmrib03_space-other_T2star_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-oxfordFmrib03/anat/{sub-oxfordFmrib03_space-other_T2w_softseg.json => sub-oxfordFmrib03_space-other_T2w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-oxfordFmrib03/anat/{sub-oxfordFmrib03_space-other_T2w_softseg.nii.gz => sub-oxfordFmrib03_space-other_T2w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-oxfordFmrib03/dwi/{sub-oxfordFmrib03_rec-average_dwi_softseg.json => sub-oxfordFmrib03_rec-average_dwi_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-oxfordFmrib03/dwi/{sub-oxfordFmrib03_rec-average_dwi_softseg.nii.gz => sub-oxfordFmrib03_rec-average_dwi_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-oxfordFmrib04/anat/{sub-oxfordFmrib04_flip-1_mt-on_space-other_MTS_softseg.json => sub-oxfordFmrib04_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-oxfordFmrib04/anat/{sub-oxfordFmrib04_flip-1_mt-on_space-other_MTS_softseg.nii.gz => sub-oxfordFmrib04_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-oxfordFmrib04/anat/{sub-oxfordFmrib04_flip-2_mt-off_space-other_MTS_softseg.json => sub-oxfordFmrib04_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-oxfordFmrib04/anat/{sub-oxfordFmrib04_flip-2_mt-off_space-other_MTS_softseg.nii.gz => sub-oxfordFmrib04_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-oxfordFmrib04/anat/{sub-oxfordFmrib04_space-other_T1w_softseg.json => sub-oxfordFmrib04_space-other_T1w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-oxfordFmrib04/anat/{sub-oxfordFmrib04_space-other_T1w_softseg.nii.gz => sub-oxfordFmrib04_space-other_T1w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-oxfordFmrib04/anat/{sub-oxfordFmrib04_space-other_T2star_softseg.json => sub-oxfordFmrib04_space-other_T2star_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-oxfordFmrib04/anat/{sub-oxfordFmrib04_space-other_T2star_softseg.nii.gz => sub-oxfordFmrib04_space-other_T2star_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-oxfordFmrib04/anat/{sub-oxfordFmrib04_space-other_T2w_softseg.json => sub-oxfordFmrib04_space-other_T2w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-oxfordFmrib04/anat/{sub-oxfordFmrib04_space-other_T2w_softseg.nii.gz => sub-oxfordFmrib04_space-other_T2w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-oxfordFmrib04/dwi/{sub-oxfordFmrib04_rec-average_dwi_softseg.json => sub-oxfordFmrib04_rec-average_dwi_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-oxfordFmrib04/dwi/{sub-oxfordFmrib04_rec-average_dwi_softseg.nii.gz => sub-oxfordFmrib04_rec-average_dwi_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-oxfordFmrib05/anat/{sub-oxfordFmrib05_flip-1_mt-on_space-other_MTS_softseg.json => sub-oxfordFmrib05_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-oxfordFmrib05/anat/{sub-oxfordFmrib05_flip-1_mt-on_space-other_MTS_softseg.nii.gz => sub-oxfordFmrib05_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-oxfordFmrib05/anat/{sub-oxfordFmrib05_flip-2_mt-off_space-other_MTS_softseg.json => sub-oxfordFmrib05_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-oxfordFmrib05/anat/{sub-oxfordFmrib05_flip-2_mt-off_space-other_MTS_softseg.nii.gz => sub-oxfordFmrib05_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-oxfordFmrib05/anat/{sub-oxfordFmrib05_space-other_T1w_softseg.json => sub-oxfordFmrib05_space-other_T1w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-oxfordFmrib05/anat/{sub-oxfordFmrib05_space-other_T1w_softseg.nii.gz => sub-oxfordFmrib05_space-other_T1w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-oxfordFmrib05/anat/{sub-oxfordFmrib05_space-other_T2star_softseg.json => sub-oxfordFmrib05_space-other_T2star_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-oxfordFmrib05/anat/{sub-oxfordFmrib05_space-other_T2star_softseg.nii.gz => sub-oxfordFmrib05_space-other_T2star_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-oxfordFmrib05/anat/{sub-oxfordFmrib05_space-other_T2w_softseg.json => sub-oxfordFmrib05_space-other_T2w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-oxfordFmrib05/anat/{sub-oxfordFmrib05_space-other_T2w_softseg.nii.gz => sub-oxfordFmrib05_space-other_T2w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-oxfordFmrib05/dwi/{sub-oxfordFmrib05_rec-average_dwi_softseg.json => sub-oxfordFmrib05_rec-average_dwi_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-oxfordFmrib05/dwi/{sub-oxfordFmrib05_rec-average_dwi_softseg.nii.gz => sub-oxfordFmrib05_rec-average_dwi_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-oxfordFmrib06/anat/{sub-oxfordFmrib06_flip-1_mt-on_space-other_MTS_softseg.json => sub-oxfordFmrib06_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-oxfordFmrib06/anat/{sub-oxfordFmrib06_flip-1_mt-on_space-other_MTS_softseg.nii.gz => sub-oxfordFmrib06_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-oxfordFmrib06/anat/{sub-oxfordFmrib06_flip-2_mt-off_space-other_MTS_softseg.json => sub-oxfordFmrib06_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-oxfordFmrib06/anat/{sub-oxfordFmrib06_flip-2_mt-off_space-other_MTS_softseg.nii.gz => sub-oxfordFmrib06_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-oxfordFmrib06/anat/{sub-oxfordFmrib06_space-other_T1w_softseg.json => sub-oxfordFmrib06_space-other_T1w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-oxfordFmrib06/anat/{sub-oxfordFmrib06_space-other_T1w_softseg.nii.gz => sub-oxfordFmrib06_space-other_T1w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-oxfordFmrib06/anat/{sub-oxfordFmrib06_space-other_T2star_softseg.json => sub-oxfordFmrib06_space-other_T2star_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-oxfordFmrib06/anat/{sub-oxfordFmrib06_space-other_T2star_softseg.nii.gz => sub-oxfordFmrib06_space-other_T2star_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-oxfordFmrib06/anat/{sub-oxfordFmrib06_space-other_T2w_softseg.json => sub-oxfordFmrib06_space-other_T2w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-oxfordFmrib06/anat/{sub-oxfordFmrib06_space-other_T2w_softseg.nii.gz => sub-oxfordFmrib06_space-other_T2w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-oxfordFmrib06/dwi/{sub-oxfordFmrib06_rec-average_dwi_softseg.json => sub-oxfordFmrib06_rec-average_dwi_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-oxfordFmrib06/dwi/{sub-oxfordFmrib06_rec-average_dwi_softseg.nii.gz => sub-oxfordFmrib06_rec-average_dwi_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-oxfordFmrib07/anat/{sub-oxfordFmrib07_flip-1_mt-on_space-other_MTS_softseg.json => sub-oxfordFmrib07_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-oxfordFmrib07/anat/{sub-oxfordFmrib07_flip-1_mt-on_space-other_MTS_softseg.nii.gz => sub-oxfordFmrib07_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-oxfordFmrib07/anat/{sub-oxfordFmrib07_flip-2_mt-off_space-other_MTS_softseg.json => sub-oxfordFmrib07_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-oxfordFmrib07/anat/{sub-oxfordFmrib07_flip-2_mt-off_space-other_MTS_softseg.nii.gz => sub-oxfordFmrib07_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-oxfordFmrib07/anat/{sub-oxfordFmrib07_space-other_T1w_softseg.json => sub-oxfordFmrib07_space-other_T1w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-oxfordFmrib07/anat/{sub-oxfordFmrib07_space-other_T1w_softseg.nii.gz => sub-oxfordFmrib07_space-other_T1w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-oxfordFmrib07/anat/{sub-oxfordFmrib07_space-other_T2star_softseg.json => sub-oxfordFmrib07_space-other_T2star_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-oxfordFmrib07/anat/{sub-oxfordFmrib07_space-other_T2star_softseg.nii.gz => sub-oxfordFmrib07_space-other_T2star_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-oxfordFmrib07/anat/{sub-oxfordFmrib07_space-other_T2w_softseg.json => sub-oxfordFmrib07_space-other_T2w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-oxfordFmrib07/anat/{sub-oxfordFmrib07_space-other_T2w_softseg.nii.gz => sub-oxfordFmrib07_space-other_T2w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-oxfordFmrib07/dwi/{sub-oxfordFmrib07_rec-average_dwi_softseg.json => sub-oxfordFmrib07_rec-average_dwi_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-oxfordFmrib07/dwi/{sub-oxfordFmrib07_rec-average_dwi_softseg.nii.gz => sub-oxfordFmrib07_rec-average_dwi_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-oxfordFmrib08/anat/{sub-oxfordFmrib08_flip-1_mt-on_space-other_MTS_softseg.json => sub-oxfordFmrib08_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-oxfordFmrib08/anat/{sub-oxfordFmrib08_flip-1_mt-on_space-other_MTS_softseg.nii.gz => sub-oxfordFmrib08_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-oxfordFmrib08/anat/{sub-oxfordFmrib08_flip-2_mt-off_space-other_MTS_softseg.json => sub-oxfordFmrib08_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-oxfordFmrib08/anat/{sub-oxfordFmrib08_flip-2_mt-off_space-other_MTS_softseg.nii.gz => sub-oxfordFmrib08_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-oxfordFmrib08/anat/{sub-oxfordFmrib08_space-other_T1w_softseg.json => sub-oxfordFmrib08_space-other_T1w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-oxfordFmrib08/anat/{sub-oxfordFmrib08_space-other_T1w_softseg.nii.gz => sub-oxfordFmrib08_space-other_T1w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-oxfordFmrib08/anat/{sub-oxfordFmrib08_space-other_T2star_softseg.json => sub-oxfordFmrib08_space-other_T2star_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-oxfordFmrib08/anat/{sub-oxfordFmrib08_space-other_T2star_softseg.nii.gz => sub-oxfordFmrib08_space-other_T2star_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-oxfordFmrib08/anat/{sub-oxfordFmrib08_space-other_T2w_softseg.json => sub-oxfordFmrib08_space-other_T2w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-oxfordFmrib08/anat/{sub-oxfordFmrib08_space-other_T2w_softseg.nii.gz => sub-oxfordFmrib08_space-other_T2w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-oxfordFmrib08/dwi/{sub-oxfordFmrib08_rec-average_dwi_softseg.json => sub-oxfordFmrib08_rec-average_dwi_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-oxfordFmrib08/dwi/{sub-oxfordFmrib08_rec-average_dwi_softseg.nii.gz => sub-oxfordFmrib08_rec-average_dwi_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-oxfordFmrib09/anat/{sub-oxfordFmrib09_flip-1_mt-on_space-other_MTS_softseg.json => sub-oxfordFmrib09_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-oxfordFmrib09/anat/{sub-oxfordFmrib09_flip-1_mt-on_space-other_MTS_softseg.nii.gz => sub-oxfordFmrib09_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-oxfordFmrib09/anat/{sub-oxfordFmrib09_flip-2_mt-off_space-other_MTS_softseg.json => sub-oxfordFmrib09_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-oxfordFmrib09/anat/{sub-oxfordFmrib09_flip-2_mt-off_space-other_MTS_softseg.nii.gz => sub-oxfordFmrib09_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-oxfordFmrib09/anat/{sub-oxfordFmrib09_space-other_T1w_softseg.json => sub-oxfordFmrib09_space-other_T1w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-oxfordFmrib09/anat/{sub-oxfordFmrib09_space-other_T1w_softseg.nii.gz => sub-oxfordFmrib09_space-other_T1w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-oxfordFmrib09/anat/{sub-oxfordFmrib09_space-other_T2star_softseg.json => sub-oxfordFmrib09_space-other_T2star_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-oxfordFmrib09/anat/{sub-oxfordFmrib09_space-other_T2star_softseg.nii.gz => sub-oxfordFmrib09_space-other_T2star_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-oxfordFmrib09/anat/{sub-oxfordFmrib09_space-other_T2w_softseg.json => sub-oxfordFmrib09_space-other_T2w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-oxfordFmrib09/anat/{sub-oxfordFmrib09_space-other_T2w_softseg.nii.gz => sub-oxfordFmrib09_space-other_T2w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-oxfordFmrib09/dwi/{sub-oxfordFmrib09_rec-average_dwi_softseg.json => sub-oxfordFmrib09_rec-average_dwi_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-oxfordFmrib09/dwi/{sub-oxfordFmrib09_rec-average_dwi_softseg.nii.gz => sub-oxfordFmrib09_rec-average_dwi_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-oxfordFmrib10/anat/{sub-oxfordFmrib10_flip-1_mt-on_space-other_MTS_softseg.json => sub-oxfordFmrib10_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-oxfordFmrib10/anat/{sub-oxfordFmrib10_flip-1_mt-on_space-other_MTS_softseg.nii.gz => sub-oxfordFmrib10_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-oxfordFmrib10/anat/{sub-oxfordFmrib10_flip-2_mt-off_space-other_MTS_softseg.json => sub-oxfordFmrib10_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-oxfordFmrib10/anat/{sub-oxfordFmrib10_flip-2_mt-off_space-other_MTS_softseg.nii.gz => sub-oxfordFmrib10_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-oxfordFmrib10/anat/{sub-oxfordFmrib10_space-other_T1w_softseg.json => sub-oxfordFmrib10_space-other_T1w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-oxfordFmrib10/anat/{sub-oxfordFmrib10_space-other_T1w_softseg.nii.gz => sub-oxfordFmrib10_space-other_T1w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-oxfordFmrib10/anat/{sub-oxfordFmrib10_space-other_T2star_softseg.json => sub-oxfordFmrib10_space-other_T2star_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-oxfordFmrib10/anat/{sub-oxfordFmrib10_space-other_T2star_softseg.nii.gz => sub-oxfordFmrib10_space-other_T2star_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-oxfordFmrib10/anat/{sub-oxfordFmrib10_space-other_T2w_softseg.json => sub-oxfordFmrib10_space-other_T2w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-oxfordFmrib10/anat/{sub-oxfordFmrib10_space-other_T2w_softseg.nii.gz => sub-oxfordFmrib10_space-other_T2w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-oxfordFmrib10/dwi/{sub-oxfordFmrib10_rec-average_dwi_softseg.json => sub-oxfordFmrib10_rec-average_dwi_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-oxfordFmrib10/dwi/{sub-oxfordFmrib10_rec-average_dwi_softseg.nii.gz => sub-oxfordFmrib10_rec-average_dwi_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-oxfordFmrib11/anat/{sub-oxfordFmrib11_flip-1_mt-on_space-other_MTS_softseg.json => sub-oxfordFmrib11_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-oxfordFmrib11/anat/{sub-oxfordFmrib11_flip-1_mt-on_space-other_MTS_softseg.nii.gz => sub-oxfordFmrib11_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-oxfordFmrib11/anat/{sub-oxfordFmrib11_flip-2_mt-off_space-other_MTS_softseg.json => sub-oxfordFmrib11_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-oxfordFmrib11/anat/{sub-oxfordFmrib11_flip-2_mt-off_space-other_MTS_softseg.nii.gz => sub-oxfordFmrib11_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-oxfordFmrib11/anat/{sub-oxfordFmrib11_space-other_T1w_softseg.json => sub-oxfordFmrib11_space-other_T1w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-oxfordFmrib11/anat/{sub-oxfordFmrib11_space-other_T1w_softseg.nii.gz => sub-oxfordFmrib11_space-other_T1w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-oxfordFmrib11/anat/{sub-oxfordFmrib11_space-other_T2star_softseg.json => sub-oxfordFmrib11_space-other_T2star_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-oxfordFmrib11/anat/{sub-oxfordFmrib11_space-other_T2star_softseg.nii.gz => sub-oxfordFmrib11_space-other_T2star_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-oxfordFmrib11/anat/{sub-oxfordFmrib11_space-other_T2w_softseg.json => sub-oxfordFmrib11_space-other_T2w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-oxfordFmrib11/anat/{sub-oxfordFmrib11_space-other_T2w_softseg.nii.gz => sub-oxfordFmrib11_space-other_T2w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-oxfordFmrib11/dwi/{sub-oxfordFmrib11_rec-average_dwi_softseg.json => sub-oxfordFmrib11_rec-average_dwi_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-oxfordFmrib11/dwi/{sub-oxfordFmrib11_rec-average_dwi_softseg.nii.gz => sub-oxfordFmrib11_rec-average_dwi_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-oxfordOhba01/anat/{sub-oxfordOhba01_flip-1_mt-on_space-other_MTS_softseg.json => sub-oxfordOhba01_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-oxfordOhba01/anat/{sub-oxfordOhba01_flip-1_mt-on_space-other_MTS_softseg.nii.gz => sub-oxfordOhba01_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-oxfordOhba01/anat/{sub-oxfordOhba01_flip-2_mt-off_space-other_MTS_softseg.json => sub-oxfordOhba01_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-oxfordOhba01/anat/{sub-oxfordOhba01_flip-2_mt-off_space-other_MTS_softseg.nii.gz => sub-oxfordOhba01_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-oxfordOhba01/anat/{sub-oxfordOhba01_space-other_T1w_softseg.json => sub-oxfordOhba01_space-other_T1w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-oxfordOhba01/anat/{sub-oxfordOhba01_space-other_T1w_softseg.nii.gz => sub-oxfordOhba01_space-other_T1w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-oxfordOhba01/anat/{sub-oxfordOhba01_space-other_T2star_softseg.json => sub-oxfordOhba01_space-other_T2star_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-oxfordOhba01/anat/{sub-oxfordOhba01_space-other_T2star_softseg.nii.gz => sub-oxfordOhba01_space-other_T2star_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-oxfordOhba01/anat/{sub-oxfordOhba01_space-other_T2w_softseg.json => sub-oxfordOhba01_space-other_T2w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-oxfordOhba01/anat/{sub-oxfordOhba01_space-other_T2w_softseg.nii.gz => sub-oxfordOhba01_space-other_T2w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-oxfordOhba01/dwi/{sub-oxfordOhba01_rec-average_dwi_softseg.json => sub-oxfordOhba01_rec-average_dwi_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-oxfordOhba01/dwi/{sub-oxfordOhba01_rec-average_dwi_softseg.nii.gz => sub-oxfordOhba01_rec-average_dwi_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-oxfordOhba02/anat/{sub-oxfordOhba02_flip-1_mt-on_space-other_MTS_softseg.json => sub-oxfordOhba02_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-oxfordOhba02/anat/{sub-oxfordOhba02_flip-1_mt-on_space-other_MTS_softseg.nii.gz => sub-oxfordOhba02_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-oxfordOhba02/anat/{sub-oxfordOhba02_flip-2_mt-off_space-other_MTS_softseg.json => sub-oxfordOhba02_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-oxfordOhba02/anat/{sub-oxfordOhba02_flip-2_mt-off_space-other_MTS_softseg.nii.gz => sub-oxfordOhba02_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-oxfordOhba02/anat/{sub-oxfordOhba02_space-other_T1w_softseg.json => sub-oxfordOhba02_space-other_T1w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-oxfordOhba02/anat/{sub-oxfordOhba02_space-other_T1w_softseg.nii.gz => sub-oxfordOhba02_space-other_T1w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-oxfordOhba02/anat/{sub-oxfordOhba02_space-other_T2star_softseg.json => sub-oxfordOhba02_space-other_T2star_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-oxfordOhba02/anat/{sub-oxfordOhba02_space-other_T2star_softseg.nii.gz => sub-oxfordOhba02_space-other_T2star_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-oxfordOhba02/anat/{sub-oxfordOhba02_space-other_T2w_softseg.json => sub-oxfordOhba02_space-other_T2w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-oxfordOhba02/anat/{sub-oxfordOhba02_space-other_T2w_softseg.nii.gz => sub-oxfordOhba02_space-other_T2w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-oxfordOhba03/anat/{sub-oxfordOhba03_flip-1_mt-on_space-other_MTS_softseg.json => sub-oxfordOhba03_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-oxfordOhba03/anat/{sub-oxfordOhba03_flip-1_mt-on_space-other_MTS_softseg.nii.gz => sub-oxfordOhba03_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-oxfordOhba03/anat/{sub-oxfordOhba03_flip-2_mt-off_space-other_MTS_softseg.json => sub-oxfordOhba03_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-oxfordOhba03/anat/{sub-oxfordOhba03_flip-2_mt-off_space-other_MTS_softseg.nii.gz => sub-oxfordOhba03_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-oxfordOhba03/anat/{sub-oxfordOhba03_space-other_T1w_softseg.json => sub-oxfordOhba03_space-other_T1w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-oxfordOhba03/anat/{sub-oxfordOhba03_space-other_T1w_softseg.nii.gz => sub-oxfordOhba03_space-other_T1w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-oxfordOhba03/anat/{sub-oxfordOhba03_space-other_T2star_softseg.json => sub-oxfordOhba03_space-other_T2star_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-oxfordOhba03/anat/{sub-oxfordOhba03_space-other_T2star_softseg.nii.gz => sub-oxfordOhba03_space-other_T2star_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-oxfordOhba03/anat/{sub-oxfordOhba03_space-other_T2w_softseg.json => sub-oxfordOhba03_space-other_T2w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-oxfordOhba03/anat/{sub-oxfordOhba03_space-other_T2w_softseg.nii.gz => sub-oxfordOhba03_space-other_T2w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-oxfordOhba03/dwi/{sub-oxfordOhba03_rec-average_dwi_softseg.json => sub-oxfordOhba03_rec-average_dwi_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-oxfordOhba03/dwi/{sub-oxfordOhba03_rec-average_dwi_softseg.nii.gz => sub-oxfordOhba03_rec-average_dwi_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-oxfordOhba04/anat/{sub-oxfordOhba04_flip-1_mt-on_space-other_MTS_softseg.json => sub-oxfordOhba04_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-oxfordOhba04/anat/{sub-oxfordOhba04_flip-1_mt-on_space-other_MTS_softseg.nii.gz => sub-oxfordOhba04_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-oxfordOhba04/anat/{sub-oxfordOhba04_flip-2_mt-off_space-other_MTS_softseg.json => sub-oxfordOhba04_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-oxfordOhba04/anat/{sub-oxfordOhba04_flip-2_mt-off_space-other_MTS_softseg.nii.gz => sub-oxfordOhba04_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-oxfordOhba04/anat/{sub-oxfordOhba04_space-other_T1w_softseg.json => sub-oxfordOhba04_space-other_T1w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-oxfordOhba04/anat/{sub-oxfordOhba04_space-other_T1w_softseg.nii.gz => sub-oxfordOhba04_space-other_T1w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-oxfordOhba04/anat/{sub-oxfordOhba04_space-other_T2star_softseg.json => sub-oxfordOhba04_space-other_T2star_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-oxfordOhba04/anat/{sub-oxfordOhba04_space-other_T2star_softseg.nii.gz => sub-oxfordOhba04_space-other_T2star_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-oxfordOhba04/anat/{sub-oxfordOhba04_space-other_T2w_softseg.json => sub-oxfordOhba04_space-other_T2w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-oxfordOhba04/anat/{sub-oxfordOhba04_space-other_T2w_softseg.nii.gz => sub-oxfordOhba04_space-other_T2w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-oxfordOhba04/dwi/{sub-oxfordOhba04_rec-average_dwi_softseg.json => sub-oxfordOhba04_rec-average_dwi_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-oxfordOhba04/dwi/{sub-oxfordOhba04_rec-average_dwi_softseg.nii.gz => sub-oxfordOhba04_rec-average_dwi_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-oxfordOhba05/anat/{sub-oxfordOhba05_flip-1_mt-on_space-other_MTS_softseg.json => sub-oxfordOhba05_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-oxfordOhba05/anat/{sub-oxfordOhba05_flip-1_mt-on_space-other_MTS_softseg.nii.gz => sub-oxfordOhba05_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-oxfordOhba05/anat/{sub-oxfordOhba05_flip-2_mt-off_space-other_MTS_softseg.json => sub-oxfordOhba05_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-oxfordOhba05/anat/{sub-oxfordOhba05_flip-2_mt-off_space-other_MTS_softseg.nii.gz => sub-oxfordOhba05_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-oxfordOhba05/anat/{sub-oxfordOhba05_space-other_T1w_softseg.json => sub-oxfordOhba05_space-other_T1w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-oxfordOhba05/anat/{sub-oxfordOhba05_space-other_T1w_softseg.nii.gz => sub-oxfordOhba05_space-other_T1w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-oxfordOhba05/anat/{sub-oxfordOhba05_space-other_T2star_softseg.json => sub-oxfordOhba05_space-other_T2star_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-oxfordOhba05/anat/{sub-oxfordOhba05_space-other_T2star_softseg.nii.gz => sub-oxfordOhba05_space-other_T2star_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-oxfordOhba05/anat/{sub-oxfordOhba05_space-other_T2w_softseg.json => sub-oxfordOhba05_space-other_T2w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-oxfordOhba05/anat/{sub-oxfordOhba05_space-other_T2w_softseg.nii.gz => sub-oxfordOhba05_space-other_T2w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-oxfordOhba05/dwi/{sub-oxfordOhba05_rec-average_dwi_softseg.json => sub-oxfordOhba05_rec-average_dwi_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-oxfordOhba05/dwi/{sub-oxfordOhba05_rec-average_dwi_softseg.nii.gz => sub-oxfordOhba05_rec-average_dwi_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-pavia01/anat/{sub-pavia01_flip-1_mt-on_space-other_MTS_softseg.json => sub-pavia01_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-pavia01/anat/{sub-pavia01_flip-1_mt-on_space-other_MTS_softseg.nii.gz => sub-pavia01_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-pavia01/anat/{sub-pavia01_flip-2_mt-off_space-other_MTS_softseg.json => sub-pavia01_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-pavia01/anat/{sub-pavia01_flip-2_mt-off_space-other_MTS_softseg.nii.gz => sub-pavia01_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-pavia01/anat/{sub-pavia01_space-other_T1w_softseg.json => sub-pavia01_space-other_T1w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-pavia01/anat/{sub-pavia01_space-other_T1w_softseg.nii.gz => sub-pavia01_space-other_T1w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-pavia01/anat/{sub-pavia01_space-other_T2star_softseg.json => sub-pavia01_space-other_T2star_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-pavia01/anat/{sub-pavia01_space-other_T2star_softseg.nii.gz => sub-pavia01_space-other_T2star_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-pavia01/anat/{sub-pavia01_space-other_T2w_softseg.json => sub-pavia01_space-other_T2w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-pavia01/anat/{sub-pavia01_space-other_T2w_softseg.nii.gz => sub-pavia01_space-other_T2w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-pavia01/dwi/{sub-pavia01_rec-average_dwi_softseg.json => sub-pavia01_rec-average_dwi_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-pavia01/dwi/{sub-pavia01_rec-average_dwi_softseg.nii.gz => sub-pavia01_rec-average_dwi_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-pavia02/anat/{sub-pavia02_flip-1_mt-on_space-other_MTS_softseg.json => sub-pavia02_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-pavia02/anat/{sub-pavia02_flip-1_mt-on_space-other_MTS_softseg.nii.gz => sub-pavia02_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-pavia02/anat/{sub-pavia02_flip-2_mt-off_space-other_MTS_softseg.json => sub-pavia02_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-pavia02/anat/{sub-pavia02_flip-2_mt-off_space-other_MTS_softseg.nii.gz => sub-pavia02_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-pavia02/anat/{sub-pavia02_space-other_T1w_softseg.json => sub-pavia02_space-other_T1w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-pavia02/anat/{sub-pavia02_space-other_T1w_softseg.nii.gz => sub-pavia02_space-other_T1w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-pavia02/anat/{sub-pavia02_space-other_T2star_softseg.json => sub-pavia02_space-other_T2star_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-pavia02/anat/{sub-pavia02_space-other_T2star_softseg.nii.gz => sub-pavia02_space-other_T2star_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-pavia02/anat/{sub-pavia02_space-other_T2w_softseg.json => sub-pavia02_space-other_T2w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-pavia02/anat/{sub-pavia02_space-other_T2w_softseg.nii.gz => sub-pavia02_space-other_T2w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-pavia02/dwi/{sub-pavia02_rec-average_dwi_softseg.json => sub-pavia02_rec-average_dwi_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-pavia02/dwi/{sub-pavia02_rec-average_dwi_softseg.nii.gz => sub-pavia02_rec-average_dwi_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-pavia03/anat/{sub-pavia03_flip-1_mt-on_space-other_MTS_softseg.json => sub-pavia03_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-pavia03/anat/{sub-pavia03_flip-1_mt-on_space-other_MTS_softseg.nii.gz => sub-pavia03_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-pavia03/anat/{sub-pavia03_flip-2_mt-off_space-other_MTS_softseg.json => sub-pavia03_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-pavia03/anat/{sub-pavia03_flip-2_mt-off_space-other_MTS_softseg.nii.gz => sub-pavia03_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-pavia03/anat/{sub-pavia03_space-other_T1w_softseg.json => sub-pavia03_space-other_T1w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-pavia03/anat/{sub-pavia03_space-other_T1w_softseg.nii.gz => sub-pavia03_space-other_T1w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-pavia03/anat/{sub-pavia03_space-other_T2star_softseg.json => sub-pavia03_space-other_T2star_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-pavia03/anat/{sub-pavia03_space-other_T2star_softseg.nii.gz => sub-pavia03_space-other_T2star_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-pavia03/anat/{sub-pavia03_space-other_T2w_softseg.json => sub-pavia03_space-other_T2w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-pavia03/anat/{sub-pavia03_space-other_T2w_softseg.nii.gz => sub-pavia03_space-other_T2w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-pavia03/dwi/{sub-pavia03_rec-average_dwi_softseg.json => sub-pavia03_rec-average_dwi_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-pavia03/dwi/{sub-pavia03_rec-average_dwi_softseg.nii.gz => sub-pavia03_rec-average_dwi_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-pavia04/anat/{sub-pavia04_flip-1_mt-on_space-other_MTS_softseg.json => sub-pavia04_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-pavia04/anat/{sub-pavia04_flip-1_mt-on_space-other_MTS_softseg.nii.gz => sub-pavia04_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-pavia04/anat/{sub-pavia04_flip-2_mt-off_space-other_MTS_softseg.json => sub-pavia04_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-pavia04/anat/{sub-pavia04_flip-2_mt-off_space-other_MTS_softseg.nii.gz => sub-pavia04_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-pavia04/anat/{sub-pavia04_space-other_T1w_softseg.json => sub-pavia04_space-other_T1w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-pavia04/anat/{sub-pavia04_space-other_T1w_softseg.nii.gz => sub-pavia04_space-other_T1w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-pavia04/anat/{sub-pavia04_space-other_T2star_softseg.json => sub-pavia04_space-other_T2star_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-pavia04/anat/{sub-pavia04_space-other_T2star_softseg.nii.gz => sub-pavia04_space-other_T2star_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-pavia04/anat/{sub-pavia04_space-other_T2w_softseg.json => sub-pavia04_space-other_T2w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-pavia04/anat/{sub-pavia04_space-other_T2w_softseg.nii.gz => sub-pavia04_space-other_T2w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-pavia04/dwi/{sub-pavia04_rec-average_dwi_softseg.json => sub-pavia04_rec-average_dwi_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-pavia04/dwi/{sub-pavia04_rec-average_dwi_softseg.nii.gz => sub-pavia04_rec-average_dwi_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-pavia05/anat/{sub-pavia05_flip-1_mt-on_space-other_MTS_softseg.json => sub-pavia05_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-pavia05/anat/{sub-pavia05_flip-1_mt-on_space-other_MTS_softseg.nii.gz => sub-pavia05_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-pavia05/anat/{sub-pavia05_flip-2_mt-off_space-other_MTS_softseg.json => sub-pavia05_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-pavia05/anat/{sub-pavia05_flip-2_mt-off_space-other_MTS_softseg.nii.gz => sub-pavia05_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-pavia05/anat/{sub-pavia05_space-other_T1w_softseg.json => sub-pavia05_space-other_T1w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-pavia05/anat/{sub-pavia05_space-other_T1w_softseg.nii.gz => sub-pavia05_space-other_T1w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-pavia05/anat/{sub-pavia05_space-other_T2star_softseg.json => sub-pavia05_space-other_T2star_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-pavia05/anat/{sub-pavia05_space-other_T2star_softseg.nii.gz => sub-pavia05_space-other_T2star_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-pavia05/anat/{sub-pavia05_space-other_T2w_softseg.json => sub-pavia05_space-other_T2w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-pavia05/anat/{sub-pavia05_space-other_T2w_softseg.nii.gz => sub-pavia05_space-other_T2w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-pavia05/dwi/{sub-pavia05_rec-average_dwi_softseg.json => sub-pavia05_rec-average_dwi_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-pavia05/dwi/{sub-pavia05_rec-average_dwi_softseg.nii.gz => sub-pavia05_rec-average_dwi_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-pavia06/anat/{sub-pavia06_flip-1_mt-on_space-other_MTS_softseg.json => sub-pavia06_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-pavia06/anat/{sub-pavia06_flip-1_mt-on_space-other_MTS_softseg.nii.gz => sub-pavia06_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-pavia06/anat/{sub-pavia06_flip-2_mt-off_space-other_MTS_softseg.json => sub-pavia06_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-pavia06/anat/{sub-pavia06_flip-2_mt-off_space-other_MTS_softseg.nii.gz => sub-pavia06_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-pavia06/anat/{sub-pavia06_space-other_T1w_softseg.json => sub-pavia06_space-other_T1w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-pavia06/anat/{sub-pavia06_space-other_T1w_softseg.nii.gz => sub-pavia06_space-other_T1w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-pavia06/anat/{sub-pavia06_space-other_T2star_softseg.json => sub-pavia06_space-other_T2star_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-pavia06/anat/{sub-pavia06_space-other_T2star_softseg.nii.gz => sub-pavia06_space-other_T2star_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-pavia06/anat/{sub-pavia06_space-other_T2w_softseg.json => sub-pavia06_space-other_T2w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-pavia06/anat/{sub-pavia06_space-other_T2w_softseg.nii.gz => sub-pavia06_space-other_T2w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-pavia06/dwi/{sub-pavia06_rec-average_dwi_softseg.json => sub-pavia06_rec-average_dwi_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-pavia06/dwi/{sub-pavia06_rec-average_dwi_softseg.nii.gz => sub-pavia06_rec-average_dwi_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-perform01/anat/{sub-perform01_flip-1_mt-on_space-other_MTS_softseg.json => sub-perform01_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-perform01/anat/{sub-perform01_flip-1_mt-on_space-other_MTS_softseg.nii.gz => sub-perform01_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-perform01/anat/{sub-perform01_flip-2_mt-off_space-other_MTS_softseg.json => sub-perform01_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-perform01/anat/{sub-perform01_flip-2_mt-off_space-other_MTS_softseg.nii.gz => sub-perform01_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-perform01/anat/{sub-perform01_space-other_T1w_softseg.json => sub-perform01_space-other_T1w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-perform01/anat/{sub-perform01_space-other_T1w_softseg.nii.gz => sub-perform01_space-other_T1w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-perform01/anat/{sub-perform01_space-other_T2star_softseg.json => sub-perform01_space-other_T2star_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-perform01/anat/{sub-perform01_space-other_T2star_softseg.nii.gz => sub-perform01_space-other_T2star_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-perform01/anat/{sub-perform01_space-other_T2w_softseg.json => sub-perform01_space-other_T2w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-perform01/anat/{sub-perform01_space-other_T2w_softseg.nii.gz => sub-perform01_space-other_T2w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-perform01/dwi/{sub-perform01_rec-average_dwi_softseg.json => sub-perform01_rec-average_dwi_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-perform01/dwi/{sub-perform01_rec-average_dwi_softseg.nii.gz => sub-perform01_rec-average_dwi_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-perform02/anat/{sub-perform02_flip-1_mt-on_space-other_MTS_softseg.json => sub-perform02_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-perform02/anat/{sub-perform02_flip-1_mt-on_space-other_MTS_softseg.nii.gz => sub-perform02_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-perform02/anat/{sub-perform02_flip-2_mt-off_space-other_MTS_softseg.json => sub-perform02_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-perform02/anat/{sub-perform02_flip-2_mt-off_space-other_MTS_softseg.nii.gz => sub-perform02_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-perform02/anat/{sub-perform02_space-other_T1w_softseg.json => sub-perform02_space-other_T1w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-perform02/anat/{sub-perform02_space-other_T1w_softseg.nii.gz => sub-perform02_space-other_T1w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-perform02/anat/{sub-perform02_space-other_T2star_softseg.json => sub-perform02_space-other_T2star_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-perform02/anat/{sub-perform02_space-other_T2star_softseg.nii.gz => sub-perform02_space-other_T2star_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-perform02/anat/{sub-perform02_space-other_T2w_softseg.json => sub-perform02_space-other_T2w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-perform02/anat/{sub-perform02_space-other_T2w_softseg.nii.gz => sub-perform02_space-other_T2w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-perform02/dwi/{sub-perform02_rec-average_dwi_softseg.json => sub-perform02_rec-average_dwi_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-perform02/dwi/{sub-perform02_rec-average_dwi_softseg.nii.gz => sub-perform02_rec-average_dwi_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-perform03/anat/{sub-perform03_flip-1_mt-on_space-other_MTS_softseg.json => sub-perform03_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-perform03/anat/{sub-perform03_flip-1_mt-on_space-other_MTS_softseg.nii.gz => sub-perform03_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-perform03/anat/{sub-perform03_flip-2_mt-off_space-other_MTS_softseg.json => sub-perform03_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-perform03/anat/{sub-perform03_flip-2_mt-off_space-other_MTS_softseg.nii.gz => sub-perform03_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-perform03/anat/{sub-perform03_space-other_T1w_softseg.json => sub-perform03_space-other_T1w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-perform03/anat/{sub-perform03_space-other_T1w_softseg.nii.gz => sub-perform03_space-other_T1w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-perform03/anat/{sub-perform03_space-other_T2star_softseg.json => sub-perform03_space-other_T2star_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-perform03/anat/{sub-perform03_space-other_T2star_softseg.nii.gz => sub-perform03_space-other_T2star_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-perform03/anat/{sub-perform03_space-other_T2w_softseg.json => sub-perform03_space-other_T2w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-perform03/anat/{sub-perform03_space-other_T2w_softseg.nii.gz => sub-perform03_space-other_T2w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-perform03/dwi/{sub-perform03_rec-average_dwi_softseg.json => sub-perform03_rec-average_dwi_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-perform03/dwi/{sub-perform03_rec-average_dwi_softseg.nii.gz => sub-perform03_rec-average_dwi_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-perform04/anat/{sub-perform04_flip-1_mt-on_space-other_MTS_softseg.json => sub-perform04_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-perform04/anat/{sub-perform04_flip-1_mt-on_space-other_MTS_softseg.nii.gz => sub-perform04_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-perform04/anat/{sub-perform04_flip-2_mt-off_space-other_MTS_softseg.json => sub-perform04_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-perform04/anat/{sub-perform04_flip-2_mt-off_space-other_MTS_softseg.nii.gz => sub-perform04_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-perform04/anat/{sub-perform04_space-other_T1w_softseg.json => sub-perform04_space-other_T1w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-perform04/anat/{sub-perform04_space-other_T1w_softseg.nii.gz => sub-perform04_space-other_T1w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-perform04/anat/{sub-perform04_space-other_T2star_softseg.json => sub-perform04_space-other_T2star_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-perform04/anat/{sub-perform04_space-other_T2star_softseg.nii.gz => sub-perform04_space-other_T2star_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-perform04/anat/{sub-perform04_space-other_T2w_softseg.json => sub-perform04_space-other_T2w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-perform04/anat/{sub-perform04_space-other_T2w_softseg.nii.gz => sub-perform04_space-other_T2w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-perform04/dwi/{sub-perform04_rec-average_dwi_softseg.json => sub-perform04_rec-average_dwi_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-perform04/dwi/{sub-perform04_rec-average_dwi_softseg.nii.gz => sub-perform04_rec-average_dwi_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-perform05/anat/{sub-perform05_flip-1_mt-on_space-other_MTS_softseg.json => sub-perform05_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-perform05/anat/{sub-perform05_flip-1_mt-on_space-other_MTS_softseg.nii.gz => sub-perform05_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-perform05/anat/{sub-perform05_flip-2_mt-off_space-other_MTS_softseg.json => sub-perform05_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-perform05/anat/{sub-perform05_flip-2_mt-off_space-other_MTS_softseg.nii.gz => sub-perform05_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-perform05/anat/{sub-perform05_space-other_T1w_softseg.json => sub-perform05_space-other_T1w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-perform05/anat/{sub-perform05_space-other_T1w_softseg.nii.gz => sub-perform05_space-other_T1w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-perform05/anat/{sub-perform05_space-other_T2star_softseg.json => sub-perform05_space-other_T2star_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-perform05/anat/{sub-perform05_space-other_T2star_softseg.nii.gz => sub-perform05_space-other_T2star_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-perform05/anat/{sub-perform05_space-other_T2w_softseg.json => sub-perform05_space-other_T2w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-perform05/anat/{sub-perform05_space-other_T2w_softseg.nii.gz => sub-perform05_space-other_T2w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-perform05/dwi/{sub-perform05_rec-average_dwi_softseg.json => sub-perform05_rec-average_dwi_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-perform05/dwi/{sub-perform05_rec-average_dwi_softseg.nii.gz => sub-perform05_rec-average_dwi_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-perform06/anat/{sub-perform06_flip-1_mt-on_space-other_MTS_softseg.json => sub-perform06_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-perform06/anat/{sub-perform06_flip-1_mt-on_space-other_MTS_softseg.nii.gz => sub-perform06_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-perform06/anat/{sub-perform06_flip-2_mt-off_space-other_MTS_softseg.json => sub-perform06_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-perform06/anat/{sub-perform06_flip-2_mt-off_space-other_MTS_softseg.nii.gz => sub-perform06_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-perform06/anat/{sub-perform06_space-other_T1w_softseg.json => sub-perform06_space-other_T1w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-perform06/anat/{sub-perform06_space-other_T1w_softseg.nii.gz => sub-perform06_space-other_T1w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-perform06/anat/{sub-perform06_space-other_T2star_softseg.json => sub-perform06_space-other_T2star_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-perform06/anat/{sub-perform06_space-other_T2star_softseg.nii.gz => sub-perform06_space-other_T2star_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-perform06/anat/{sub-perform06_space-other_T2w_softseg.json => sub-perform06_space-other_T2w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-perform06/anat/{sub-perform06_space-other_T2w_softseg.nii.gz => sub-perform06_space-other_T2w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-perform06/dwi/{sub-perform06_rec-average_dwi_softseg.json => sub-perform06_rec-average_dwi_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-perform06/dwi/{sub-perform06_rec-average_dwi_softseg.nii.gz => sub-perform06_rec-average_dwi_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-queensland01/anat/{sub-queensland01_flip-1_mt-on_space-other_MTS_softseg.json => sub-queensland01_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-queensland01/anat/{sub-queensland01_flip-1_mt-on_space-other_MTS_softseg.nii.gz => sub-queensland01_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-queensland01/anat/{sub-queensland01_flip-2_mt-off_space-other_MTS_softseg.json => sub-queensland01_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-queensland01/anat/{sub-queensland01_flip-2_mt-off_space-other_MTS_softseg.nii.gz => sub-queensland01_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-queensland01/anat/{sub-queensland01_space-other_T1w_softseg.json => sub-queensland01_space-other_T1w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-queensland01/anat/{sub-queensland01_space-other_T1w_softseg.nii.gz => sub-queensland01_space-other_T1w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-queensland01/anat/{sub-queensland01_space-other_T2star_softseg.json => sub-queensland01_space-other_T2star_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-queensland01/anat/{sub-queensland01_space-other_T2star_softseg.nii.gz => sub-queensland01_space-other_T2star_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-queensland01/anat/{sub-queensland01_space-other_T2w_softseg.json => sub-queensland01_space-other_T2w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-queensland01/anat/{sub-queensland01_space-other_T2w_softseg.nii.gz => sub-queensland01_space-other_T2w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-queensland01/dwi/{sub-queensland01_rec-average_dwi_softseg.json => sub-queensland01_rec-average_dwi_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-queensland01/dwi/{sub-queensland01_rec-average_dwi_softseg.nii.gz => sub-queensland01_rec-average_dwi_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-queensland02/anat/{sub-queensland02_flip-1_mt-on_space-other_MTS_softseg.json => sub-queensland02_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-queensland02/anat/{sub-queensland02_flip-1_mt-on_space-other_MTS_softseg.nii.gz => sub-queensland02_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-queensland02/anat/{sub-queensland02_flip-2_mt-off_space-other_MTS_softseg.json => sub-queensland02_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-queensland02/anat/{sub-queensland02_flip-2_mt-off_space-other_MTS_softseg.nii.gz => sub-queensland02_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-queensland02/anat/{sub-queensland02_space-other_T1w_softseg.json => sub-queensland02_space-other_T1w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-queensland02/anat/{sub-queensland02_space-other_T1w_softseg.nii.gz => sub-queensland02_space-other_T1w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-queensland02/anat/{sub-queensland02_space-other_T2star_softseg.json => sub-queensland02_space-other_T2star_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-queensland02/anat/{sub-queensland02_space-other_T2star_softseg.nii.gz => sub-queensland02_space-other_T2star_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-queensland02/anat/{sub-queensland02_space-other_T2w_softseg.json => sub-queensland02_space-other_T2w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-queensland02/anat/{sub-queensland02_space-other_T2w_softseg.nii.gz => sub-queensland02_space-other_T2w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-queensland02/dwi/{sub-queensland02_rec-average_dwi_softseg.json => sub-queensland02_rec-average_dwi_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-queensland02/dwi/{sub-queensland02_rec-average_dwi_softseg.nii.gz => sub-queensland02_rec-average_dwi_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-queensland03/anat/{sub-queensland03_flip-1_mt-on_space-other_MTS_softseg.json => sub-queensland03_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-queensland03/anat/{sub-queensland03_flip-1_mt-on_space-other_MTS_softseg.nii.gz => sub-queensland03_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-queensland03/anat/{sub-queensland03_flip-2_mt-off_space-other_MTS_softseg.json => sub-queensland03_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-queensland03/anat/{sub-queensland03_flip-2_mt-off_space-other_MTS_softseg.nii.gz => sub-queensland03_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-queensland03/anat/{sub-queensland03_space-other_T1w_softseg.json => sub-queensland03_space-other_T1w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-queensland03/anat/{sub-queensland03_space-other_T1w_softseg.nii.gz => sub-queensland03_space-other_T1w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-queensland03/anat/{sub-queensland03_space-other_T2star_softseg.json => sub-queensland03_space-other_T2star_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-queensland03/anat/{sub-queensland03_space-other_T2star_softseg.nii.gz => sub-queensland03_space-other_T2star_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-queensland03/anat/{sub-queensland03_space-other_T2w_softseg.json => sub-queensland03_space-other_T2w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-queensland03/anat/{sub-queensland03_space-other_T2w_softseg.nii.gz => sub-queensland03_space-other_T2w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-queensland03/dwi/{sub-queensland03_rec-average_dwi_softseg.json => sub-queensland03_rec-average_dwi_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-queensland03/dwi/{sub-queensland03_rec-average_dwi_softseg.nii.gz => sub-queensland03_rec-average_dwi_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-queensland04/anat/{sub-queensland04_flip-1_mt-on_space-other_MTS_softseg.json => sub-queensland04_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-queensland04/anat/{sub-queensland04_flip-1_mt-on_space-other_MTS_softseg.nii.gz => sub-queensland04_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-queensland04/anat/{sub-queensland04_flip-2_mt-off_space-other_MTS_softseg.json => sub-queensland04_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-queensland04/anat/{sub-queensland04_flip-2_mt-off_space-other_MTS_softseg.nii.gz => sub-queensland04_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-queensland04/anat/{sub-queensland04_space-other_T1w_softseg.json => sub-queensland04_space-other_T1w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-queensland04/anat/{sub-queensland04_space-other_T1w_softseg.nii.gz => sub-queensland04_space-other_T1w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-queensland04/anat/{sub-queensland04_space-other_T2star_softseg.json => sub-queensland04_space-other_T2star_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-queensland04/anat/{sub-queensland04_space-other_T2star_softseg.nii.gz => sub-queensland04_space-other_T2star_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-queensland04/anat/{sub-queensland04_space-other_T2w_softseg.json => sub-queensland04_space-other_T2w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-queensland04/anat/{sub-queensland04_space-other_T2w_softseg.nii.gz => sub-queensland04_space-other_T2w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-queensland04/dwi/{sub-queensland04_rec-average_dwi_softseg.json => sub-queensland04_rec-average_dwi_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-queensland04/dwi/{sub-queensland04_rec-average_dwi_softseg.nii.gz => sub-queensland04_rec-average_dwi_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-queensland05/anat/{sub-queensland05_flip-1_mt-on_space-other_MTS_softseg.json => sub-queensland05_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-queensland05/anat/{sub-queensland05_flip-1_mt-on_space-other_MTS_softseg.nii.gz => sub-queensland05_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-queensland05/anat/{sub-queensland05_flip-2_mt-off_space-other_MTS_softseg.json => sub-queensland05_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-queensland05/anat/{sub-queensland05_flip-2_mt-off_space-other_MTS_softseg.nii.gz => sub-queensland05_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-queensland05/anat/{sub-queensland05_space-other_T1w_softseg.json => sub-queensland05_space-other_T1w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-queensland05/anat/{sub-queensland05_space-other_T1w_softseg.nii.gz => sub-queensland05_space-other_T1w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-queensland05/anat/{sub-queensland05_space-other_T2star_softseg.json => sub-queensland05_space-other_T2star_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-queensland05/anat/{sub-queensland05_space-other_T2star_softseg.nii.gz => sub-queensland05_space-other_T2star_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-queensland05/anat/{sub-queensland05_space-other_T2w_softseg.json => sub-queensland05_space-other_T2w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-queensland05/anat/{sub-queensland05_space-other_T2w_softseg.nii.gz => sub-queensland05_space-other_T2w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-queensland05/dwi/{sub-queensland05_rec-average_dwi_softseg.json => sub-queensland05_rec-average_dwi_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-queensland05/dwi/{sub-queensland05_rec-average_dwi_softseg.nii.gz => sub-queensland05_rec-average_dwi_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-queensland06/anat/{sub-queensland06_flip-1_mt-on_space-other_MTS_softseg.json => sub-queensland06_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-queensland06/anat/{sub-queensland06_flip-1_mt-on_space-other_MTS_softseg.nii.gz => sub-queensland06_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-queensland06/anat/{sub-queensland06_flip-2_mt-off_space-other_MTS_softseg.json => sub-queensland06_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-queensland06/anat/{sub-queensland06_flip-2_mt-off_space-other_MTS_softseg.nii.gz => sub-queensland06_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-queensland06/anat/{sub-queensland06_space-other_T1w_softseg.json => sub-queensland06_space-other_T1w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-queensland06/anat/{sub-queensland06_space-other_T1w_softseg.nii.gz => sub-queensland06_space-other_T1w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-queensland06/anat/{sub-queensland06_space-other_T2star_softseg.json => sub-queensland06_space-other_T2star_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-queensland06/anat/{sub-queensland06_space-other_T2star_softseg.nii.gz => sub-queensland06_space-other_T2star_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-queensland06/anat/{sub-queensland06_space-other_T2w_softseg.json => sub-queensland06_space-other_T2w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-queensland06/anat/{sub-queensland06_space-other_T2w_softseg.nii.gz => sub-queensland06_space-other_T2w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-queensland06/dwi/{sub-queensland06_rec-average_dwi_softseg.json => sub-queensland06_rec-average_dwi_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-queensland06/dwi/{sub-queensland06_rec-average_dwi_softseg.nii.gz => sub-queensland06_rec-average_dwi_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-sherbrooke01/anat/{sub-sherbrooke01_flip-1_mt-on_space-other_MTS_softseg.json => sub-sherbrooke01_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-sherbrooke01/anat/{sub-sherbrooke01_flip-1_mt-on_space-other_MTS_softseg.nii.gz => sub-sherbrooke01_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-sherbrooke01/anat/{sub-sherbrooke01_flip-2_mt-off_space-other_MTS_softseg.json => sub-sherbrooke01_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-sherbrooke01/anat/{sub-sherbrooke01_flip-2_mt-off_space-other_MTS_softseg.nii.gz => sub-sherbrooke01_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-sherbrooke01/anat/{sub-sherbrooke01_space-other_T1w_softseg.json => sub-sherbrooke01_space-other_T1w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-sherbrooke01/anat/{sub-sherbrooke01_space-other_T1w_softseg.nii.gz => sub-sherbrooke01_space-other_T1w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-sherbrooke01/anat/{sub-sherbrooke01_space-other_T2star_softseg.json => sub-sherbrooke01_space-other_T2star_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-sherbrooke01/anat/{sub-sherbrooke01_space-other_T2star_softseg.nii.gz => sub-sherbrooke01_space-other_T2star_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-sherbrooke01/anat/{sub-sherbrooke01_space-other_T2w_softseg.json => sub-sherbrooke01_space-other_T2w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-sherbrooke01/anat/{sub-sherbrooke01_space-other_T2w_softseg.nii.gz => sub-sherbrooke01_space-other_T2w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-sherbrooke01/dwi/{sub-sherbrooke01_rec-average_dwi_softseg.json => sub-sherbrooke01_rec-average_dwi_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-sherbrooke01/dwi/{sub-sherbrooke01_rec-average_dwi_softseg.nii.gz => sub-sherbrooke01_rec-average_dwi_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-sherbrooke02/anat/{sub-sherbrooke02_flip-1_mt-on_space-other_MTS_softseg.json => sub-sherbrooke02_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-sherbrooke02/anat/{sub-sherbrooke02_flip-1_mt-on_space-other_MTS_softseg.nii.gz => sub-sherbrooke02_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-sherbrooke02/anat/{sub-sherbrooke02_flip-2_mt-off_space-other_MTS_softseg.json => sub-sherbrooke02_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-sherbrooke02/anat/{sub-sherbrooke02_flip-2_mt-off_space-other_MTS_softseg.nii.gz => sub-sherbrooke02_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-sherbrooke02/anat/{sub-sherbrooke02_space-other_T1w_softseg.json => sub-sherbrooke02_space-other_T1w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-sherbrooke02/anat/{sub-sherbrooke02_space-other_T1w_softseg.nii.gz => sub-sherbrooke02_space-other_T1w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-sherbrooke02/anat/{sub-sherbrooke02_space-other_T2star_softseg.json => sub-sherbrooke02_space-other_T2star_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-sherbrooke02/anat/{sub-sherbrooke02_space-other_T2star_softseg.nii.gz => sub-sherbrooke02_space-other_T2star_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-sherbrooke02/anat/{sub-sherbrooke02_space-other_T2w_softseg.json => sub-sherbrooke02_space-other_T2w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-sherbrooke02/anat/{sub-sherbrooke02_space-other_T2w_softseg.nii.gz => sub-sherbrooke02_space-other_T2w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-sherbrooke02/dwi/{sub-sherbrooke02_rec-average_dwi_softseg.json => sub-sherbrooke02_rec-average_dwi_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-sherbrooke02/dwi/{sub-sherbrooke02_rec-average_dwi_softseg.nii.gz => sub-sherbrooke02_rec-average_dwi_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-sherbrooke03/anat/{sub-sherbrooke03_flip-1_mt-on_space-other_MTS_softseg.json => sub-sherbrooke03_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-sherbrooke03/anat/{sub-sherbrooke03_flip-1_mt-on_space-other_MTS_softseg.nii.gz => sub-sherbrooke03_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-sherbrooke03/anat/{sub-sherbrooke03_flip-2_mt-off_space-other_MTS_softseg.json => sub-sherbrooke03_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-sherbrooke03/anat/{sub-sherbrooke03_flip-2_mt-off_space-other_MTS_softseg.nii.gz => sub-sherbrooke03_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-sherbrooke03/anat/{sub-sherbrooke03_space-other_T1w_softseg.json => sub-sherbrooke03_space-other_T1w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-sherbrooke03/anat/{sub-sherbrooke03_space-other_T1w_softseg.nii.gz => sub-sherbrooke03_space-other_T1w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-sherbrooke03/anat/{sub-sherbrooke03_space-other_T2star_softseg.json => sub-sherbrooke03_space-other_T2star_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-sherbrooke03/anat/{sub-sherbrooke03_space-other_T2star_softseg.nii.gz => sub-sherbrooke03_space-other_T2star_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-sherbrooke03/anat/{sub-sherbrooke03_space-other_T2w_softseg.json => sub-sherbrooke03_space-other_T2w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-sherbrooke03/anat/{sub-sherbrooke03_space-other_T2w_softseg.nii.gz => sub-sherbrooke03_space-other_T2w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-sherbrooke03/dwi/{sub-sherbrooke03_rec-average_dwi_softseg.json => sub-sherbrooke03_rec-average_dwi_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-sherbrooke03/dwi/{sub-sherbrooke03_rec-average_dwi_softseg.nii.gz => sub-sherbrooke03_rec-average_dwi_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-sherbrooke04/anat/{sub-sherbrooke04_flip-1_mt-on_space-other_MTS_softseg.json => sub-sherbrooke04_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-sherbrooke04/anat/{sub-sherbrooke04_flip-1_mt-on_space-other_MTS_softseg.nii.gz => sub-sherbrooke04_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-sherbrooke04/anat/{sub-sherbrooke04_flip-2_mt-off_space-other_MTS_softseg.json => sub-sherbrooke04_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-sherbrooke04/anat/{sub-sherbrooke04_flip-2_mt-off_space-other_MTS_softseg.nii.gz => sub-sherbrooke04_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-sherbrooke04/anat/{sub-sherbrooke04_space-other_T1w_softseg.json => sub-sherbrooke04_space-other_T1w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-sherbrooke04/anat/{sub-sherbrooke04_space-other_T1w_softseg.nii.gz => sub-sherbrooke04_space-other_T1w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-sherbrooke04/anat/{sub-sherbrooke04_space-other_T2star_softseg.json => sub-sherbrooke04_space-other_T2star_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-sherbrooke04/anat/{sub-sherbrooke04_space-other_T2star_softseg.nii.gz => sub-sherbrooke04_space-other_T2star_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-sherbrooke04/anat/{sub-sherbrooke04_space-other_T2w_softseg.json => sub-sherbrooke04_space-other_T2w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-sherbrooke04/anat/{sub-sherbrooke04_space-other_T2w_softseg.nii.gz => sub-sherbrooke04_space-other_T2w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-sherbrooke04/dwi/{sub-sherbrooke04_rec-average_dwi_softseg.json => sub-sherbrooke04_rec-average_dwi_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-sherbrooke04/dwi/{sub-sherbrooke04_rec-average_dwi_softseg.nii.gz => sub-sherbrooke04_rec-average_dwi_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-sherbrooke05/anat/{sub-sherbrooke05_flip-1_mt-on_space-other_MTS_softseg.json => sub-sherbrooke05_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-sherbrooke05/anat/{sub-sherbrooke05_flip-1_mt-on_space-other_MTS_softseg.nii.gz => sub-sherbrooke05_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-sherbrooke05/anat/{sub-sherbrooke05_flip-2_mt-off_space-other_MTS_softseg.json => sub-sherbrooke05_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-sherbrooke05/anat/{sub-sherbrooke05_flip-2_mt-off_space-other_MTS_softseg.nii.gz => sub-sherbrooke05_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-sherbrooke05/anat/{sub-sherbrooke05_space-other_T1w_softseg.json => sub-sherbrooke05_space-other_T1w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-sherbrooke05/anat/{sub-sherbrooke05_space-other_T1w_softseg.nii.gz => sub-sherbrooke05_space-other_T1w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-sherbrooke05/anat/{sub-sherbrooke05_space-other_T2star_softseg.json => sub-sherbrooke05_space-other_T2star_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-sherbrooke05/anat/{sub-sherbrooke05_space-other_T2star_softseg.nii.gz => sub-sherbrooke05_space-other_T2star_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-sherbrooke05/anat/{sub-sherbrooke05_space-other_T2w_softseg.json => sub-sherbrooke05_space-other_T2w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-sherbrooke05/anat/{sub-sherbrooke05_space-other_T2w_softseg.nii.gz => sub-sherbrooke05_space-other_T2w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-sherbrooke05/dwi/{sub-sherbrooke05_rec-average_dwi_softseg.json => sub-sherbrooke05_rec-average_dwi_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-sherbrooke05/dwi/{sub-sherbrooke05_rec-average_dwi_softseg.nii.gz => sub-sherbrooke05_rec-average_dwi_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-sherbrooke06/anat/{sub-sherbrooke06_flip-1_mt-on_space-other_MTS_softseg.json => sub-sherbrooke06_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-sherbrooke06/anat/{sub-sherbrooke06_flip-1_mt-on_space-other_MTS_softseg.nii.gz => sub-sherbrooke06_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-sherbrooke06/anat/{sub-sherbrooke06_flip-2_mt-off_space-other_MTS_softseg.json => sub-sherbrooke06_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-sherbrooke06/anat/{sub-sherbrooke06_flip-2_mt-off_space-other_MTS_softseg.nii.gz => sub-sherbrooke06_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-sherbrooke06/anat/{sub-sherbrooke06_space-other_T1w_softseg.json => sub-sherbrooke06_space-other_T1w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-sherbrooke06/anat/{sub-sherbrooke06_space-other_T1w_softseg.nii.gz => sub-sherbrooke06_space-other_T1w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-sherbrooke06/anat/{sub-sherbrooke06_space-other_T2star_softseg.json => sub-sherbrooke06_space-other_T2star_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-sherbrooke06/anat/{sub-sherbrooke06_space-other_T2star_softseg.nii.gz => sub-sherbrooke06_space-other_T2star_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-sherbrooke06/anat/{sub-sherbrooke06_space-other_T2w_softseg.json => sub-sherbrooke06_space-other_T2w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-sherbrooke06/anat/{sub-sherbrooke06_space-other_T2w_softseg.nii.gz => sub-sherbrooke06_space-other_T2w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-sherbrooke06/dwi/{sub-sherbrooke06_rec-average_dwi_softseg.json => sub-sherbrooke06_rec-average_dwi_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-sherbrooke06/dwi/{sub-sherbrooke06_rec-average_dwi_softseg.nii.gz => sub-sherbrooke06_rec-average_dwi_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-sherbrooke07/anat/{sub-sherbrooke07_flip-1_mt-on_space-other_MTS_softseg.json => sub-sherbrooke07_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-sherbrooke07/anat/{sub-sherbrooke07_flip-1_mt-on_space-other_MTS_softseg.nii.gz => sub-sherbrooke07_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-sherbrooke07/anat/{sub-sherbrooke07_flip-2_mt-off_space-other_MTS_softseg.json => sub-sherbrooke07_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-sherbrooke07/anat/{sub-sherbrooke07_flip-2_mt-off_space-other_MTS_softseg.nii.gz => sub-sherbrooke07_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-sherbrooke07/anat/{sub-sherbrooke07_space-other_T1w_softseg.json => sub-sherbrooke07_space-other_T1w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-sherbrooke07/anat/{sub-sherbrooke07_space-other_T1w_softseg.nii.gz => sub-sherbrooke07_space-other_T1w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-sherbrooke07/anat/{sub-sherbrooke07_space-other_T2star_softseg.json => sub-sherbrooke07_space-other_T2star_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-sherbrooke07/anat/{sub-sherbrooke07_space-other_T2star_softseg.nii.gz => sub-sherbrooke07_space-other_T2star_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-sherbrooke07/anat/{sub-sherbrooke07_space-other_T2w_softseg.json => sub-sherbrooke07_space-other_T2w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-sherbrooke07/anat/{sub-sherbrooke07_space-other_T2w_softseg.nii.gz => sub-sherbrooke07_space-other_T2w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-sherbrooke07/dwi/{sub-sherbrooke07_rec-average_dwi_softseg.json => sub-sherbrooke07_rec-average_dwi_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-sherbrooke07/dwi/{sub-sherbrooke07_rec-average_dwi_softseg.nii.gz => sub-sherbrooke07_rec-average_dwi_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-stanford01/anat/{sub-stanford01_flip-1_mt-on_space-other_MTS_softseg.json => sub-stanford01_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-stanford01/anat/{sub-stanford01_flip-1_mt-on_space-other_MTS_softseg.nii.gz => sub-stanford01_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-stanford01/anat/{sub-stanford01_flip-2_mt-off_space-other_MTS_softseg.json => sub-stanford01_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-stanford01/anat/{sub-stanford01_flip-2_mt-off_space-other_MTS_softseg.nii.gz => sub-stanford01_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-stanford01/anat/{sub-stanford01_space-other_T1w_softseg.json => sub-stanford01_space-other_T1w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-stanford01/anat/{sub-stanford01_space-other_T1w_softseg.nii.gz => sub-stanford01_space-other_T1w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-stanford01/anat/{sub-stanford01_space-other_T2star_softseg.json => sub-stanford01_space-other_T2star_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-stanford01/anat/{sub-stanford01_space-other_T2star_softseg.nii.gz => sub-stanford01_space-other_T2star_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-stanford01/anat/{sub-stanford01_space-other_T2w_softseg.json => sub-stanford01_space-other_T2w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-stanford01/anat/{sub-stanford01_space-other_T2w_softseg.nii.gz => sub-stanford01_space-other_T2w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-stanford01/dwi/{sub-stanford01_rec-average_dwi_softseg.json => sub-stanford01_rec-average_dwi_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-stanford01/dwi/{sub-stanford01_rec-average_dwi_softseg.nii.gz => sub-stanford01_rec-average_dwi_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-stanford02/anat/{sub-stanford02_flip-1_mt-on_space-other_MTS_softseg.json => sub-stanford02_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-stanford02/anat/{sub-stanford02_flip-1_mt-on_space-other_MTS_softseg.nii.gz => sub-stanford02_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-stanford02/anat/{sub-stanford02_flip-2_mt-off_space-other_MTS_softseg.json => sub-stanford02_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-stanford02/anat/{sub-stanford02_flip-2_mt-off_space-other_MTS_softseg.nii.gz => sub-stanford02_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-stanford02/anat/{sub-stanford02_space-other_T1w_softseg.json => sub-stanford02_space-other_T1w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-stanford02/anat/{sub-stanford02_space-other_T1w_softseg.nii.gz => sub-stanford02_space-other_T1w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-stanford02/anat/{sub-stanford02_space-other_T2star_softseg.json => sub-stanford02_space-other_T2star_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-stanford02/anat/{sub-stanford02_space-other_T2star_softseg.nii.gz => sub-stanford02_space-other_T2star_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-stanford02/anat/{sub-stanford02_space-other_T2w_softseg.json => sub-stanford02_space-other_T2w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-stanford02/anat/{sub-stanford02_space-other_T2w_softseg.nii.gz => sub-stanford02_space-other_T2w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-stanford02/dwi/{sub-stanford02_rec-average_dwi_softseg.json => sub-stanford02_rec-average_dwi_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-stanford02/dwi/{sub-stanford02_rec-average_dwi_softseg.nii.gz => sub-stanford02_rec-average_dwi_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-stanford03/anat/{sub-stanford03_flip-1_mt-on_space-other_MTS_softseg.json => sub-stanford03_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-stanford03/anat/{sub-stanford03_flip-1_mt-on_space-other_MTS_softseg.nii.gz => sub-stanford03_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-stanford03/anat/{sub-stanford03_flip-2_mt-off_space-other_MTS_softseg.json => sub-stanford03_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-stanford03/anat/{sub-stanford03_flip-2_mt-off_space-other_MTS_softseg.nii.gz => sub-stanford03_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-stanford03/anat/{sub-stanford03_space-other_T1w_softseg.json => sub-stanford03_space-other_T1w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-stanford03/anat/{sub-stanford03_space-other_T1w_softseg.nii.gz => sub-stanford03_space-other_T1w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-stanford03/anat/{sub-stanford03_space-other_T2star_softseg.json => sub-stanford03_space-other_T2star_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-stanford03/anat/{sub-stanford03_space-other_T2star_softseg.nii.gz => sub-stanford03_space-other_T2star_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-stanford03/anat/{sub-stanford03_space-other_T2w_softseg.json => sub-stanford03_space-other_T2w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-stanford03/anat/{sub-stanford03_space-other_T2w_softseg.nii.gz => sub-stanford03_space-other_T2w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-stanford03/dwi/{sub-stanford03_rec-average_dwi_softseg.json => sub-stanford03_rec-average_dwi_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-stanford03/dwi/{sub-stanford03_rec-average_dwi_softseg.nii.gz => sub-stanford03_rec-average_dwi_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-stanford04/anat/{sub-stanford04_flip-1_mt-on_space-other_MTS_softseg.json => sub-stanford04_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-stanford04/anat/{sub-stanford04_flip-1_mt-on_space-other_MTS_softseg.nii.gz => sub-stanford04_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-stanford04/anat/{sub-stanford04_flip-2_mt-off_space-other_MTS_softseg.json => sub-stanford04_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-stanford04/anat/{sub-stanford04_flip-2_mt-off_space-other_MTS_softseg.nii.gz => sub-stanford04_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-stanford04/anat/{sub-stanford04_space-other_T1w_softseg.json => sub-stanford04_space-other_T1w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-stanford04/anat/{sub-stanford04_space-other_T1w_softseg.nii.gz => sub-stanford04_space-other_T1w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-stanford04/anat/{sub-stanford04_space-other_T2star_softseg.json => sub-stanford04_space-other_T2star_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-stanford04/anat/{sub-stanford04_space-other_T2star_softseg.nii.gz => sub-stanford04_space-other_T2star_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-stanford04/anat/{sub-stanford04_space-other_T2w_softseg.json => sub-stanford04_space-other_T2w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-stanford04/anat/{sub-stanford04_space-other_T2w_softseg.nii.gz => sub-stanford04_space-other_T2w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-stanford04/dwi/{sub-stanford04_rec-average_dwi_softseg.json => sub-stanford04_rec-average_dwi_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-stanford04/dwi/{sub-stanford04_rec-average_dwi_softseg.nii.gz => sub-stanford04_rec-average_dwi_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-stanford05/anat/{sub-stanford05_flip-1_mt-on_space-other_MTS_softseg.json => sub-stanford05_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-stanford05/anat/{sub-stanford05_flip-1_mt-on_space-other_MTS_softseg.nii.gz => sub-stanford05_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-stanford05/anat/{sub-stanford05_flip-2_mt-off_space-other_MTS_softseg.json => sub-stanford05_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-stanford05/anat/{sub-stanford05_flip-2_mt-off_space-other_MTS_softseg.nii.gz => sub-stanford05_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-stanford05/anat/{sub-stanford05_space-other_T1w_softseg.json => sub-stanford05_space-other_T1w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-stanford05/anat/{sub-stanford05_space-other_T1w_softseg.nii.gz => sub-stanford05_space-other_T1w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-stanford05/anat/{sub-stanford05_space-other_T2star_softseg.json => sub-stanford05_space-other_T2star_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-stanford05/anat/{sub-stanford05_space-other_T2star_softseg.nii.gz => sub-stanford05_space-other_T2star_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-stanford05/anat/{sub-stanford05_space-other_T2w_softseg.json => sub-stanford05_space-other_T2w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-stanford05/anat/{sub-stanford05_space-other_T2w_softseg.nii.gz => sub-stanford05_space-other_T2w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-stanford05/dwi/{sub-stanford05_rec-average_dwi_softseg.json => sub-stanford05_rec-average_dwi_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-stanford05/dwi/{sub-stanford05_rec-average_dwi_softseg.nii.gz => sub-stanford05_rec-average_dwi_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-stanford06/anat/{sub-stanford06_flip-1_mt-on_space-other_MTS_softseg.json => sub-stanford06_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-stanford06/anat/{sub-stanford06_flip-1_mt-on_space-other_MTS_softseg.nii.gz => sub-stanford06_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-stanford06/anat/{sub-stanford06_flip-2_mt-off_space-other_MTS_softseg.json => sub-stanford06_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-stanford06/anat/{sub-stanford06_flip-2_mt-off_space-other_MTS_softseg.nii.gz => sub-stanford06_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-stanford06/anat/{sub-stanford06_space-other_T1w_softseg.json => sub-stanford06_space-other_T1w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-stanford06/anat/{sub-stanford06_space-other_T1w_softseg.nii.gz => sub-stanford06_space-other_T1w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-stanford06/anat/{sub-stanford06_space-other_T2star_softseg.json => sub-stanford06_space-other_T2star_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-stanford06/anat/{sub-stanford06_space-other_T2star_softseg.nii.gz => sub-stanford06_space-other_T2star_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-stanford06/anat/{sub-stanford06_space-other_T2w_softseg.json => sub-stanford06_space-other_T2w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-stanford06/anat/{sub-stanford06_space-other_T2w_softseg.nii.gz => sub-stanford06_space-other_T2w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-stanford06/dwi/{sub-stanford06_rec-average_dwi_softseg.json => sub-stanford06_rec-average_dwi_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-stanford06/dwi/{sub-stanford06_rec-average_dwi_softseg.nii.gz => sub-stanford06_rec-average_dwi_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-strasbourg01/anat/{sub-strasbourg01_flip-1_mt-on_space-other_MTS_softseg.json => sub-strasbourg01_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-strasbourg01/anat/{sub-strasbourg01_flip-1_mt-on_space-other_MTS_softseg.nii.gz => sub-strasbourg01_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-strasbourg01/anat/{sub-strasbourg01_flip-2_mt-off_space-other_MTS_softseg.json => sub-strasbourg01_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-strasbourg01/anat/{sub-strasbourg01_flip-2_mt-off_space-other_MTS_softseg.nii.gz => sub-strasbourg01_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-strasbourg01/anat/{sub-strasbourg01_space-other_T1w_softseg.json => sub-strasbourg01_space-other_T1w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-strasbourg01/anat/{sub-strasbourg01_space-other_T1w_softseg.nii.gz => sub-strasbourg01_space-other_T1w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-strasbourg01/anat/{sub-strasbourg01_space-other_T2star_softseg.json => sub-strasbourg01_space-other_T2star_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-strasbourg01/anat/{sub-strasbourg01_space-other_T2star_softseg.nii.gz => sub-strasbourg01_space-other_T2star_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-strasbourg01/anat/{sub-strasbourg01_space-other_T2w_softseg.json => sub-strasbourg01_space-other_T2w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-strasbourg01/anat/{sub-strasbourg01_space-other_T2w_softseg.nii.gz => sub-strasbourg01_space-other_T2w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-strasbourg01/dwi/{sub-strasbourg01_rec-average_dwi_softseg.json => sub-strasbourg01_rec-average_dwi_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-strasbourg01/dwi/{sub-strasbourg01_rec-average_dwi_softseg.nii.gz => sub-strasbourg01_rec-average_dwi_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-strasbourg02/anat/{sub-strasbourg02_flip-1_mt-on_space-other_MTS_softseg.json => sub-strasbourg02_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-strasbourg02/anat/{sub-strasbourg02_flip-1_mt-on_space-other_MTS_softseg.nii.gz => sub-strasbourg02_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-strasbourg02/anat/{sub-strasbourg02_flip-2_mt-off_space-other_MTS_softseg.json => sub-strasbourg02_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-strasbourg02/anat/{sub-strasbourg02_flip-2_mt-off_space-other_MTS_softseg.nii.gz => sub-strasbourg02_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-strasbourg02/anat/{sub-strasbourg02_space-other_T1w_softseg.json => sub-strasbourg02_space-other_T1w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-strasbourg02/anat/{sub-strasbourg02_space-other_T1w_softseg.nii.gz => sub-strasbourg02_space-other_T1w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-strasbourg02/anat/{sub-strasbourg02_space-other_T2star_softseg.json => sub-strasbourg02_space-other_T2star_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-strasbourg02/anat/{sub-strasbourg02_space-other_T2star_softseg.nii.gz => sub-strasbourg02_space-other_T2star_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-strasbourg02/anat/{sub-strasbourg02_space-other_T2w_softseg.json => sub-strasbourg02_space-other_T2w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-strasbourg02/anat/{sub-strasbourg02_space-other_T2w_softseg.nii.gz => sub-strasbourg02_space-other_T2w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-strasbourg02/dwi/{sub-strasbourg02_rec-average_dwi_softseg.json => sub-strasbourg02_rec-average_dwi_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-strasbourg02/dwi/{sub-strasbourg02_rec-average_dwi_softseg.nii.gz => sub-strasbourg02_rec-average_dwi_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-strasbourg03/anat/{sub-strasbourg03_flip-1_mt-on_space-other_MTS_softseg.json => sub-strasbourg03_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-strasbourg03/anat/{sub-strasbourg03_flip-1_mt-on_space-other_MTS_softseg.nii.gz => sub-strasbourg03_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-strasbourg03/anat/{sub-strasbourg03_flip-2_mt-off_space-other_MTS_softseg.json => sub-strasbourg03_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-strasbourg03/anat/{sub-strasbourg03_flip-2_mt-off_space-other_MTS_softseg.nii.gz => sub-strasbourg03_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-strasbourg03/anat/{sub-strasbourg03_space-other_T1w_softseg.json => sub-strasbourg03_space-other_T1w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-strasbourg03/anat/{sub-strasbourg03_space-other_T1w_softseg.nii.gz => sub-strasbourg03_space-other_T1w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-strasbourg03/anat/{sub-strasbourg03_space-other_T2star_softseg.json => sub-strasbourg03_space-other_T2star_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-strasbourg03/anat/{sub-strasbourg03_space-other_T2star_softseg.nii.gz => sub-strasbourg03_space-other_T2star_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-strasbourg03/anat/{sub-strasbourg03_space-other_T2w_softseg.json => sub-strasbourg03_space-other_T2w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-strasbourg03/anat/{sub-strasbourg03_space-other_T2w_softseg.nii.gz => sub-strasbourg03_space-other_T2w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-strasbourg03/dwi/{sub-strasbourg03_rec-average_dwi_softseg.json => sub-strasbourg03_rec-average_dwi_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-strasbourg03/dwi/{sub-strasbourg03_rec-average_dwi_softseg.nii.gz => sub-strasbourg03_rec-average_dwi_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-strasbourg04/anat/{sub-strasbourg04_flip-1_mt-on_space-other_MTS_softseg.json => sub-strasbourg04_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-strasbourg04/anat/{sub-strasbourg04_flip-1_mt-on_space-other_MTS_softseg.nii.gz => sub-strasbourg04_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-strasbourg04/anat/{sub-strasbourg04_flip-2_mt-off_space-other_MTS_softseg.json => sub-strasbourg04_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-strasbourg04/anat/{sub-strasbourg04_flip-2_mt-off_space-other_MTS_softseg.nii.gz => sub-strasbourg04_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-strasbourg04/anat/{sub-strasbourg04_space-other_T1w_softseg.json => sub-strasbourg04_space-other_T1w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-strasbourg04/anat/{sub-strasbourg04_space-other_T1w_softseg.nii.gz => sub-strasbourg04_space-other_T1w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-strasbourg04/anat/{sub-strasbourg04_space-other_T2star_softseg.json => sub-strasbourg04_space-other_T2star_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-strasbourg04/anat/{sub-strasbourg04_space-other_T2star_softseg.nii.gz => sub-strasbourg04_space-other_T2star_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-strasbourg04/anat/{sub-strasbourg04_space-other_T2w_softseg.json => sub-strasbourg04_space-other_T2w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-strasbourg04/anat/{sub-strasbourg04_space-other_T2w_softseg.nii.gz => sub-strasbourg04_space-other_T2w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-strasbourg04/dwi/{sub-strasbourg04_rec-average_dwi_softseg.json => sub-strasbourg04_rec-average_dwi_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-strasbourg04/dwi/{sub-strasbourg04_rec-average_dwi_softseg.nii.gz => sub-strasbourg04_rec-average_dwi_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-strasbourg05/anat/{sub-strasbourg05_flip-1_mt-on_space-other_MTS_softseg.json => sub-strasbourg05_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-strasbourg05/anat/{sub-strasbourg05_flip-1_mt-on_space-other_MTS_softseg.nii.gz => sub-strasbourg05_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-strasbourg05/anat/{sub-strasbourg05_flip-2_mt-off_space-other_MTS_softseg.json => sub-strasbourg05_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-strasbourg05/anat/{sub-strasbourg05_flip-2_mt-off_space-other_MTS_softseg.nii.gz => sub-strasbourg05_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-strasbourg05/anat/{sub-strasbourg05_space-other_T1w_softseg.json => sub-strasbourg05_space-other_T1w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-strasbourg05/anat/{sub-strasbourg05_space-other_T1w_softseg.nii.gz => sub-strasbourg05_space-other_T1w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-strasbourg05/anat/{sub-strasbourg05_space-other_T2star_softseg.json => sub-strasbourg05_space-other_T2star_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-strasbourg05/anat/{sub-strasbourg05_space-other_T2star_softseg.nii.gz => sub-strasbourg05_space-other_T2star_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-strasbourg05/anat/{sub-strasbourg05_space-other_T2w_softseg.json => sub-strasbourg05_space-other_T2w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-strasbourg05/anat/{sub-strasbourg05_space-other_T2w_softseg.nii.gz => sub-strasbourg05_space-other_T2w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-strasbourg05/dwi/{sub-strasbourg05_rec-average_dwi_softseg.json => sub-strasbourg05_rec-average_dwi_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-strasbourg05/dwi/{sub-strasbourg05_rec-average_dwi_softseg.nii.gz => sub-strasbourg05_rec-average_dwi_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-strasbourg06/anat/{sub-strasbourg06_flip-1_mt-on_space-other_MTS_softseg.json => sub-strasbourg06_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-strasbourg06/anat/{sub-strasbourg06_flip-1_mt-on_space-other_MTS_softseg.nii.gz => sub-strasbourg06_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-strasbourg06/anat/{sub-strasbourg06_flip-2_mt-off_space-other_MTS_softseg.json => sub-strasbourg06_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-strasbourg06/anat/{sub-strasbourg06_flip-2_mt-off_space-other_MTS_softseg.nii.gz => sub-strasbourg06_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-strasbourg06/anat/{sub-strasbourg06_space-other_T1w_softseg.json => sub-strasbourg06_space-other_T1w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-strasbourg06/anat/{sub-strasbourg06_space-other_T1w_softseg.nii.gz => sub-strasbourg06_space-other_T1w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-strasbourg06/anat/{sub-strasbourg06_space-other_T2star_softseg.json => sub-strasbourg06_space-other_T2star_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-strasbourg06/anat/{sub-strasbourg06_space-other_T2star_softseg.nii.gz => sub-strasbourg06_space-other_T2star_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-strasbourg06/anat/{sub-strasbourg06_space-other_T2w_softseg.json => sub-strasbourg06_space-other_T2w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-strasbourg06/anat/{sub-strasbourg06_space-other_T2w_softseg.nii.gz => sub-strasbourg06_space-other_T2w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-strasbourg06/dwi/{sub-strasbourg06_rec-average_dwi_softseg.json => sub-strasbourg06_rec-average_dwi_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-strasbourg06/dwi/{sub-strasbourg06_rec-average_dwi_softseg.nii.gz => sub-strasbourg06_rec-average_dwi_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tehranS01/anat/{sub-tehranS01_flip-1_mt-on_space-other_MTS_softseg.json => sub-tehranS01_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-tehranS01/anat/{sub-tehranS01_flip-1_mt-on_space-other_MTS_softseg.nii.gz => sub-tehranS01_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tehranS01/anat/{sub-tehranS01_flip-2_mt-off_space-other_MTS_softseg.json => sub-tehranS01_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-tehranS01/anat/{sub-tehranS01_flip-2_mt-off_space-other_MTS_softseg.nii.gz => sub-tehranS01_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tehranS01/anat/{sub-tehranS01_space-other_T1w_softseg.json => sub-tehranS01_space-other_T1w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-tehranS01/anat/{sub-tehranS01_space-other_T1w_softseg.nii.gz => sub-tehranS01_space-other_T1w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tehranS01/anat/{sub-tehranS01_space-other_T2star_softseg.json => sub-tehranS01_space-other_T2star_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-tehranS01/anat/{sub-tehranS01_space-other_T2star_softseg.nii.gz => sub-tehranS01_space-other_T2star_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tehranS01/anat/{sub-tehranS01_space-other_T2w_softseg.json => sub-tehranS01_space-other_T2w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-tehranS01/anat/{sub-tehranS01_space-other_T2w_softseg.nii.gz => sub-tehranS01_space-other_T2w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tehranS01/dwi/{sub-tehranS01_rec-average_dwi_softseg.json => sub-tehranS01_rec-average_dwi_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-tehranS01/dwi/{sub-tehranS01_rec-average_dwi_softseg.nii.gz => sub-tehranS01_rec-average_dwi_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tehranS02/anat/{sub-tehranS02_flip-1_mt-on_space-other_MTS_softseg.json => sub-tehranS02_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-tehranS02/anat/{sub-tehranS02_flip-1_mt-on_space-other_MTS_softseg.nii.gz => sub-tehranS02_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tehranS02/anat/{sub-tehranS02_flip-2_mt-off_space-other_MTS_softseg.json => sub-tehranS02_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-tehranS02/anat/{sub-tehranS02_flip-2_mt-off_space-other_MTS_softseg.nii.gz => sub-tehranS02_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tehranS02/anat/{sub-tehranS02_space-other_T1w_softseg.json => sub-tehranS02_space-other_T1w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-tehranS02/anat/{sub-tehranS02_space-other_T1w_softseg.nii.gz => sub-tehranS02_space-other_T1w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tehranS02/anat/{sub-tehranS02_space-other_T2star_softseg.json => sub-tehranS02_space-other_T2star_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-tehranS02/anat/{sub-tehranS02_space-other_T2star_softseg.nii.gz => sub-tehranS02_space-other_T2star_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tehranS02/anat/{sub-tehranS02_space-other_T2w_softseg.json => sub-tehranS02_space-other_T2w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-tehranS02/anat/{sub-tehranS02_space-other_T2w_softseg.nii.gz => sub-tehranS02_space-other_T2w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tehranS02/dwi/{sub-tehranS02_rec-average_dwi_softseg.json => sub-tehranS02_rec-average_dwi_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-tehranS02/dwi/{sub-tehranS02_rec-average_dwi_softseg.nii.gz => sub-tehranS02_rec-average_dwi_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tehranS03/anat/{sub-tehranS03_flip-1_mt-on_space-other_MTS_softseg.json => sub-tehranS03_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-tehranS03/anat/{sub-tehranS03_flip-1_mt-on_space-other_MTS_softseg.nii.gz => sub-tehranS03_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tehranS03/anat/{sub-tehranS03_flip-2_mt-off_space-other_MTS_softseg.json => sub-tehranS03_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-tehranS03/anat/{sub-tehranS03_flip-2_mt-off_space-other_MTS_softseg.nii.gz => sub-tehranS03_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tehranS03/anat/{sub-tehranS03_space-other_T1w_softseg.json => sub-tehranS03_space-other_T1w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-tehranS03/anat/{sub-tehranS03_space-other_T1w_softseg.nii.gz => sub-tehranS03_space-other_T1w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tehranS03/anat/{sub-tehranS03_space-other_T2star_softseg.json => sub-tehranS03_space-other_T2star_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-tehranS03/anat/{sub-tehranS03_space-other_T2star_softseg.nii.gz => sub-tehranS03_space-other_T2star_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tehranS03/anat/{sub-tehranS03_space-other_T2w_softseg.json => sub-tehranS03_space-other_T2w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-tehranS03/anat/{sub-tehranS03_space-other_T2w_softseg.nii.gz => sub-tehranS03_space-other_T2w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tehranS03/dwi/{sub-tehranS03_rec-average_dwi_softseg.json => sub-tehranS03_rec-average_dwi_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-tehranS03/dwi/{sub-tehranS03_rec-average_dwi_softseg.nii.gz => sub-tehranS03_rec-average_dwi_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tehranS04/anat/{sub-tehranS04_flip-1_mt-on_space-other_MTS_softseg.json => sub-tehranS04_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-tehranS04/anat/{sub-tehranS04_flip-1_mt-on_space-other_MTS_softseg.nii.gz => sub-tehranS04_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tehranS04/anat/{sub-tehranS04_flip-2_mt-off_space-other_MTS_softseg.json => sub-tehranS04_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-tehranS04/anat/{sub-tehranS04_flip-2_mt-off_space-other_MTS_softseg.nii.gz => sub-tehranS04_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tehranS04/anat/{sub-tehranS04_space-other_T1w_softseg.json => sub-tehranS04_space-other_T1w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-tehranS04/anat/{sub-tehranS04_space-other_T1w_softseg.nii.gz => sub-tehranS04_space-other_T1w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tehranS04/anat/{sub-tehranS04_space-other_T2star_softseg.json => sub-tehranS04_space-other_T2star_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-tehranS04/anat/{sub-tehranS04_space-other_T2star_softseg.nii.gz => sub-tehranS04_space-other_T2star_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tehranS04/anat/{sub-tehranS04_space-other_T2w_softseg.json => sub-tehranS04_space-other_T2w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-tehranS04/anat/{sub-tehranS04_space-other_T2w_softseg.nii.gz => sub-tehranS04_space-other_T2w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tehranS04/dwi/{sub-tehranS04_rec-average_dwi_softseg.json => sub-tehranS04_rec-average_dwi_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-tehranS04/dwi/{sub-tehranS04_rec-average_dwi_softseg.nii.gz => sub-tehranS04_rec-average_dwi_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tehranS05/anat/{sub-tehranS05_flip-1_mt-on_space-other_MTS_softseg.json => sub-tehranS05_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-tehranS05/anat/{sub-tehranS05_flip-1_mt-on_space-other_MTS_softseg.nii.gz => sub-tehranS05_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tehranS05/anat/{sub-tehranS05_flip-2_mt-off_space-other_MTS_softseg.json => sub-tehranS05_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-tehranS05/anat/{sub-tehranS05_flip-2_mt-off_space-other_MTS_softseg.nii.gz => sub-tehranS05_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tehranS05/anat/{sub-tehranS05_space-other_T1w_softseg.json => sub-tehranS05_space-other_T1w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-tehranS05/anat/{sub-tehranS05_space-other_T1w_softseg.nii.gz => sub-tehranS05_space-other_T1w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tehranS05/anat/{sub-tehranS05_space-other_T2star_softseg.json => sub-tehranS05_space-other_T2star_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-tehranS05/anat/{sub-tehranS05_space-other_T2star_softseg.nii.gz => sub-tehranS05_space-other_T2star_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tehranS05/anat/{sub-tehranS05_space-other_T2w_softseg.json => sub-tehranS05_space-other_T2w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-tehranS05/anat/{sub-tehranS05_space-other_T2w_softseg.nii.gz => sub-tehranS05_space-other_T2w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tehranS05/dwi/{sub-tehranS05_rec-average_dwi_softseg.json => sub-tehranS05_rec-average_dwi_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-tehranS05/dwi/{sub-tehranS05_rec-average_dwi_softseg.nii.gz => sub-tehranS05_rec-average_dwi_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tehranS06/anat/{sub-tehranS06_flip-1_mt-on_space-other_MTS_softseg.json => sub-tehranS06_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-tehranS06/anat/{sub-tehranS06_flip-1_mt-on_space-other_MTS_softseg.nii.gz => sub-tehranS06_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tehranS06/anat/{sub-tehranS06_flip-2_mt-off_space-other_MTS_softseg.json => sub-tehranS06_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-tehranS06/anat/{sub-tehranS06_flip-2_mt-off_space-other_MTS_softseg.nii.gz => sub-tehranS06_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tehranS06/anat/{sub-tehranS06_space-other_T1w_softseg.json => sub-tehranS06_space-other_T1w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-tehranS06/anat/{sub-tehranS06_space-other_T1w_softseg.nii.gz => sub-tehranS06_space-other_T1w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tehranS06/anat/{sub-tehranS06_space-other_T2star_softseg.json => sub-tehranS06_space-other_T2star_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-tehranS06/anat/{sub-tehranS06_space-other_T2star_softseg.nii.gz => sub-tehranS06_space-other_T2star_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tehranS06/anat/{sub-tehranS06_space-other_T2w_softseg.json => sub-tehranS06_space-other_T2w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-tehranS06/anat/{sub-tehranS06_space-other_T2w_softseg.nii.gz => sub-tehranS06_space-other_T2w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tehranS06/dwi/{sub-tehranS06_rec-average_dwi_softseg.json => sub-tehranS06_rec-average_dwi_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-tehranS06/dwi/{sub-tehranS06_rec-average_dwi_softseg.nii.gz => sub-tehranS06_rec-average_dwi_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tokyo750w01/anat/{sub-tokyo750w01_flip-1_mt-on_space-other_MTS_softseg.json => sub-tokyo750w01_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-tokyo750w01/anat/{sub-tokyo750w01_flip-1_mt-on_space-other_MTS_softseg.nii.gz => sub-tokyo750w01_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tokyo750w01/anat/{sub-tokyo750w01_flip-2_mt-off_space-other_MTS_softseg.json => sub-tokyo750w01_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-tokyo750w01/anat/{sub-tokyo750w01_flip-2_mt-off_space-other_MTS_softseg.nii.gz => sub-tokyo750w01_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tokyo750w01/anat/{sub-tokyo750w01_space-other_T1w_softseg.json => sub-tokyo750w01_space-other_T1w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-tokyo750w01/anat/{sub-tokyo750w01_space-other_T1w_softseg.nii.gz => sub-tokyo750w01_space-other_T1w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tokyo750w01/anat/{sub-tokyo750w01_space-other_T2star_softseg.json => sub-tokyo750w01_space-other_T2star_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-tokyo750w01/anat/{sub-tokyo750w01_space-other_T2star_softseg.nii.gz => sub-tokyo750w01_space-other_T2star_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tokyo750w01/anat/{sub-tokyo750w01_space-other_T2w_softseg.json => sub-tokyo750w01_space-other_T2w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-tokyo750w01/anat/{sub-tokyo750w01_space-other_T2w_softseg.nii.gz => sub-tokyo750w01_space-other_T2w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tokyo750w01/dwi/{sub-tokyo750w01_rec-average_dwi_softseg.json => sub-tokyo750w01_rec-average_dwi_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-tokyo750w01/dwi/{sub-tokyo750w01_rec-average_dwi_softseg.nii.gz => sub-tokyo750w01_rec-average_dwi_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tokyo750w02/anat/{sub-tokyo750w02_flip-1_mt-on_space-other_MTS_softseg.json => sub-tokyo750w02_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-tokyo750w02/anat/{sub-tokyo750w02_flip-1_mt-on_space-other_MTS_softseg.nii.gz => sub-tokyo750w02_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tokyo750w02/anat/{sub-tokyo750w02_flip-2_mt-off_space-other_MTS_softseg.json => sub-tokyo750w02_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-tokyo750w02/anat/{sub-tokyo750w02_flip-2_mt-off_space-other_MTS_softseg.nii.gz => sub-tokyo750w02_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tokyo750w02/anat/{sub-tokyo750w02_space-other_T1w_softseg.json => sub-tokyo750w02_space-other_T1w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-tokyo750w02/anat/{sub-tokyo750w02_space-other_T1w_softseg.nii.gz => sub-tokyo750w02_space-other_T1w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tokyo750w02/anat/{sub-tokyo750w02_space-other_T2star_softseg.json => sub-tokyo750w02_space-other_T2star_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-tokyo750w02/anat/{sub-tokyo750w02_space-other_T2star_softseg.nii.gz => sub-tokyo750w02_space-other_T2star_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tokyo750w02/anat/{sub-tokyo750w02_space-other_T2w_softseg.json => sub-tokyo750w02_space-other_T2w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-tokyo750w02/anat/{sub-tokyo750w02_space-other_T2w_softseg.nii.gz => sub-tokyo750w02_space-other_T2w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tokyo750w02/dwi/{sub-tokyo750w02_rec-average_dwi_softseg.json => sub-tokyo750w02_rec-average_dwi_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-tokyo750w02/dwi/{sub-tokyo750w02_rec-average_dwi_softseg.nii.gz => sub-tokyo750w02_rec-average_dwi_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tokyo750w03/anat/{sub-tokyo750w03_flip-1_mt-on_space-other_MTS_softseg.json => sub-tokyo750w03_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-tokyo750w03/anat/{sub-tokyo750w03_flip-1_mt-on_space-other_MTS_softseg.nii.gz => sub-tokyo750w03_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tokyo750w03/anat/{sub-tokyo750w03_flip-2_mt-off_space-other_MTS_softseg.json => sub-tokyo750w03_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-tokyo750w03/anat/{sub-tokyo750w03_flip-2_mt-off_space-other_MTS_softseg.nii.gz => sub-tokyo750w03_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tokyo750w03/anat/{sub-tokyo750w03_space-other_T1w_softseg.json => sub-tokyo750w03_space-other_T1w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-tokyo750w03/anat/{sub-tokyo750w03_space-other_T1w_softseg.nii.gz => sub-tokyo750w03_space-other_T1w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tokyo750w03/anat/{sub-tokyo750w03_space-other_T2star_softseg.json => sub-tokyo750w03_space-other_T2star_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-tokyo750w03/anat/{sub-tokyo750w03_space-other_T2star_softseg.nii.gz => sub-tokyo750w03_space-other_T2star_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tokyo750w03/anat/{sub-tokyo750w03_space-other_T2w_softseg.json => sub-tokyo750w03_space-other_T2w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-tokyo750w03/anat/{sub-tokyo750w03_space-other_T2w_softseg.nii.gz => sub-tokyo750w03_space-other_T2w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tokyo750w03/dwi/{sub-tokyo750w03_rec-average_dwi_softseg.json => sub-tokyo750w03_rec-average_dwi_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-tokyo750w03/dwi/{sub-tokyo750w03_rec-average_dwi_softseg.nii.gz => sub-tokyo750w03_rec-average_dwi_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tokyo750w04/anat/{sub-tokyo750w04_flip-1_mt-on_space-other_MTS_softseg.json => sub-tokyo750w04_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-tokyo750w04/anat/{sub-tokyo750w04_flip-1_mt-on_space-other_MTS_softseg.nii.gz => sub-tokyo750w04_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tokyo750w04/anat/{sub-tokyo750w04_flip-2_mt-off_space-other_MTS_softseg.json => sub-tokyo750w04_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-tokyo750w04/anat/{sub-tokyo750w04_flip-2_mt-off_space-other_MTS_softseg.nii.gz => sub-tokyo750w04_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tokyo750w04/anat/{sub-tokyo750w04_space-other_T1w_softseg.json => sub-tokyo750w04_space-other_T1w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-tokyo750w04/anat/{sub-tokyo750w04_space-other_T1w_softseg.nii.gz => sub-tokyo750w04_space-other_T1w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tokyo750w04/anat/{sub-tokyo750w04_space-other_T2star_softseg.json => sub-tokyo750w04_space-other_T2star_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-tokyo750w04/anat/{sub-tokyo750w04_space-other_T2star_softseg.nii.gz => sub-tokyo750w04_space-other_T2star_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tokyo750w04/anat/{sub-tokyo750w04_space-other_T2w_softseg.json => sub-tokyo750w04_space-other_T2w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-tokyo750w04/anat/{sub-tokyo750w04_space-other_T2w_softseg.nii.gz => sub-tokyo750w04_space-other_T2w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tokyo750w04/dwi/{sub-tokyo750w04_rec-average_dwi_softseg.json => sub-tokyo750w04_rec-average_dwi_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-tokyo750w04/dwi/{sub-tokyo750w04_rec-average_dwi_softseg.nii.gz => sub-tokyo750w04_rec-average_dwi_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tokyo750w05/anat/{sub-tokyo750w05_flip-1_mt-on_space-other_MTS_softseg.json => sub-tokyo750w05_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-tokyo750w05/anat/{sub-tokyo750w05_flip-1_mt-on_space-other_MTS_softseg.nii.gz => sub-tokyo750w05_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tokyo750w05/anat/{sub-tokyo750w05_flip-2_mt-off_space-other_MTS_softseg.json => sub-tokyo750w05_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-tokyo750w05/anat/{sub-tokyo750w05_flip-2_mt-off_space-other_MTS_softseg.nii.gz => sub-tokyo750w05_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tokyo750w05/anat/{sub-tokyo750w05_space-other_T1w_softseg.json => sub-tokyo750w05_space-other_T1w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-tokyo750w05/anat/{sub-tokyo750w05_space-other_T1w_softseg.nii.gz => sub-tokyo750w05_space-other_T1w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tokyo750w05/anat/{sub-tokyo750w05_space-other_T2star_softseg.json => sub-tokyo750w05_space-other_T2star_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-tokyo750w05/anat/{sub-tokyo750w05_space-other_T2star_softseg.nii.gz => sub-tokyo750w05_space-other_T2star_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tokyo750w05/anat/{sub-tokyo750w05_space-other_T2w_softseg.json => sub-tokyo750w05_space-other_T2w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-tokyo750w05/anat/{sub-tokyo750w05_space-other_T2w_softseg.nii.gz => sub-tokyo750w05_space-other_T2w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tokyo750w05/dwi/{sub-tokyo750w05_rec-average_dwi_softseg.json => sub-tokyo750w05_rec-average_dwi_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-tokyo750w05/dwi/{sub-tokyo750w05_rec-average_dwi_softseg.nii.gz => sub-tokyo750w05_rec-average_dwi_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tokyo750w06/anat/{sub-tokyo750w06_flip-1_mt-on_space-other_MTS_softseg.json => sub-tokyo750w06_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-tokyo750w06/anat/{sub-tokyo750w06_flip-1_mt-on_space-other_MTS_softseg.nii.gz => sub-tokyo750w06_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tokyo750w06/anat/{sub-tokyo750w06_flip-2_mt-off_space-other_MTS_softseg.json => sub-tokyo750w06_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-tokyo750w06/anat/{sub-tokyo750w06_flip-2_mt-off_space-other_MTS_softseg.nii.gz => sub-tokyo750w06_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tokyo750w06/anat/{sub-tokyo750w06_space-other_T1w_softseg.json => sub-tokyo750w06_space-other_T1w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-tokyo750w06/anat/{sub-tokyo750w06_space-other_T1w_softseg.nii.gz => sub-tokyo750w06_space-other_T1w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tokyo750w06/anat/{sub-tokyo750w06_space-other_T2star_softseg.json => sub-tokyo750w06_space-other_T2star_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-tokyo750w06/anat/{sub-tokyo750w06_space-other_T2star_softseg.nii.gz => sub-tokyo750w06_space-other_T2star_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tokyo750w06/anat/{sub-tokyo750w06_space-other_T2w_softseg.json => sub-tokyo750w06_space-other_T2w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-tokyo750w06/anat/{sub-tokyo750w06_space-other_T2w_softseg.nii.gz => sub-tokyo750w06_space-other_T2w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tokyo750w06/dwi/{sub-tokyo750w06_rec-average_dwi_softseg.json => sub-tokyo750w06_rec-average_dwi_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-tokyo750w06/dwi/{sub-tokyo750w06_rec-average_dwi_softseg.nii.gz => sub-tokyo750w06_rec-average_dwi_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tokyo750w07/anat/{sub-tokyo750w07_flip-1_mt-on_space-other_MTS_softseg.json => sub-tokyo750w07_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-tokyo750w07/anat/{sub-tokyo750w07_flip-1_mt-on_space-other_MTS_softseg.nii.gz => sub-tokyo750w07_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tokyo750w07/anat/{sub-tokyo750w07_flip-2_mt-off_space-other_MTS_softseg.json => sub-tokyo750w07_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-tokyo750w07/anat/{sub-tokyo750w07_flip-2_mt-off_space-other_MTS_softseg.nii.gz => sub-tokyo750w07_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tokyo750w07/anat/{sub-tokyo750w07_space-other_T1w_softseg.json => sub-tokyo750w07_space-other_T1w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-tokyo750w07/anat/{sub-tokyo750w07_space-other_T1w_softseg.nii.gz => sub-tokyo750w07_space-other_T1w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tokyo750w07/anat/{sub-tokyo750w07_space-other_T2star_softseg.json => sub-tokyo750w07_space-other_T2star_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-tokyo750w07/anat/{sub-tokyo750w07_space-other_T2star_softseg.nii.gz => sub-tokyo750w07_space-other_T2star_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tokyo750w07/anat/{sub-tokyo750w07_space-other_T2w_softseg.json => sub-tokyo750w07_space-other_T2w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-tokyo750w07/anat/{sub-tokyo750w07_space-other_T2w_softseg.nii.gz => sub-tokyo750w07_space-other_T2w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tokyo750w07/dwi/{sub-tokyo750w07_rec-average_dwi_softseg.json => sub-tokyo750w07_rec-average_dwi_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-tokyo750w07/dwi/{sub-tokyo750w07_rec-average_dwi_softseg.nii.gz => sub-tokyo750w07_rec-average_dwi_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tokyoIngenia01/anat/{sub-tokyoIngenia01_flip-1_mt-on_space-other_MTS_softseg.json => sub-tokyoIngenia01_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-tokyoIngenia01/anat/{sub-tokyoIngenia01_flip-1_mt-on_space-other_MTS_softseg.nii.gz => sub-tokyoIngenia01_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tokyoIngenia01/anat/{sub-tokyoIngenia01_flip-2_mt-off_space-other_MTS_softseg.json => sub-tokyoIngenia01_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-tokyoIngenia01/anat/{sub-tokyoIngenia01_flip-2_mt-off_space-other_MTS_softseg.nii.gz => sub-tokyoIngenia01_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tokyoIngenia01/anat/{sub-tokyoIngenia01_space-other_T1w_softseg.json => sub-tokyoIngenia01_space-other_T1w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-tokyoIngenia01/anat/{sub-tokyoIngenia01_space-other_T1w_softseg.nii.gz => sub-tokyoIngenia01_space-other_T1w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tokyoIngenia01/anat/{sub-tokyoIngenia01_space-other_T2star_softseg.json => sub-tokyoIngenia01_space-other_T2star_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-tokyoIngenia01/anat/{sub-tokyoIngenia01_space-other_T2star_softseg.nii.gz => sub-tokyoIngenia01_space-other_T2star_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tokyoIngenia01/anat/{sub-tokyoIngenia01_space-other_T2w_softseg.json => sub-tokyoIngenia01_space-other_T2w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-tokyoIngenia01/anat/{sub-tokyoIngenia01_space-other_T2w_softseg.nii.gz => sub-tokyoIngenia01_space-other_T2w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tokyoIngenia01/dwi/{sub-tokyoIngenia01_rec-average_dwi_softseg.json => sub-tokyoIngenia01_rec-average_dwi_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-tokyoIngenia01/dwi/{sub-tokyoIngenia01_rec-average_dwi_softseg.nii.gz => sub-tokyoIngenia01_rec-average_dwi_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tokyoIngenia02/anat/{sub-tokyoIngenia02_flip-1_mt-on_space-other_MTS_softseg.json => sub-tokyoIngenia02_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-tokyoIngenia02/anat/{sub-tokyoIngenia02_flip-1_mt-on_space-other_MTS_softseg.nii.gz => sub-tokyoIngenia02_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tokyoIngenia02/anat/{sub-tokyoIngenia02_flip-2_mt-off_space-other_MTS_softseg.json => sub-tokyoIngenia02_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-tokyoIngenia02/anat/{sub-tokyoIngenia02_flip-2_mt-off_space-other_MTS_softseg.nii.gz => sub-tokyoIngenia02_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tokyoIngenia02/anat/{sub-tokyoIngenia02_space-other_T1w_softseg.json => sub-tokyoIngenia02_space-other_T1w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-tokyoIngenia02/anat/{sub-tokyoIngenia02_space-other_T1w_softseg.nii.gz => sub-tokyoIngenia02_space-other_T1w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tokyoIngenia02/anat/{sub-tokyoIngenia02_space-other_T2star_softseg.json => sub-tokyoIngenia02_space-other_T2star_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-tokyoIngenia02/anat/{sub-tokyoIngenia02_space-other_T2star_softseg.nii.gz => sub-tokyoIngenia02_space-other_T2star_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tokyoIngenia02/anat/{sub-tokyoIngenia02_space-other_T2w_softseg.json => sub-tokyoIngenia02_space-other_T2w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-tokyoIngenia02/anat/{sub-tokyoIngenia02_space-other_T2w_softseg.nii.gz => sub-tokyoIngenia02_space-other_T2w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tokyoIngenia02/dwi/{sub-tokyoIngenia02_rec-average_dwi_softseg.json => sub-tokyoIngenia02_rec-average_dwi_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-tokyoIngenia02/dwi/{sub-tokyoIngenia02_rec-average_dwi_softseg.nii.gz => sub-tokyoIngenia02_rec-average_dwi_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tokyoIngenia03/anat/{sub-tokyoIngenia03_flip-1_mt-on_space-other_MTS_softseg.json => sub-tokyoIngenia03_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-tokyoIngenia03/anat/{sub-tokyoIngenia03_flip-1_mt-on_space-other_MTS_softseg.nii.gz => sub-tokyoIngenia03_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tokyoIngenia03/anat/{sub-tokyoIngenia03_flip-2_mt-off_space-other_MTS_softseg.json => sub-tokyoIngenia03_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-tokyoIngenia03/anat/{sub-tokyoIngenia03_flip-2_mt-off_space-other_MTS_softseg.nii.gz => sub-tokyoIngenia03_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tokyoIngenia03/anat/{sub-tokyoIngenia03_space-other_T1w_softseg.json => sub-tokyoIngenia03_space-other_T1w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-tokyoIngenia03/anat/{sub-tokyoIngenia03_space-other_T1w_softseg.nii.gz => sub-tokyoIngenia03_space-other_T1w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tokyoIngenia03/anat/{sub-tokyoIngenia03_space-other_T2star_softseg.json => sub-tokyoIngenia03_space-other_T2star_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-tokyoIngenia03/anat/{sub-tokyoIngenia03_space-other_T2star_softseg.nii.gz => sub-tokyoIngenia03_space-other_T2star_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tokyoIngenia03/anat/{sub-tokyoIngenia03_space-other_T2w_softseg.json => sub-tokyoIngenia03_space-other_T2w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-tokyoIngenia03/anat/{sub-tokyoIngenia03_space-other_T2w_softseg.nii.gz => sub-tokyoIngenia03_space-other_T2w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tokyoIngenia03/dwi/{sub-tokyoIngenia03_rec-average_dwi_softseg.json => sub-tokyoIngenia03_rec-average_dwi_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-tokyoIngenia03/dwi/{sub-tokyoIngenia03_rec-average_dwi_softseg.nii.gz => sub-tokyoIngenia03_rec-average_dwi_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tokyoIngenia04/anat/{sub-tokyoIngenia04_flip-1_mt-on_space-other_MTS_softseg.json => sub-tokyoIngenia04_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-tokyoIngenia04/anat/{sub-tokyoIngenia04_flip-1_mt-on_space-other_MTS_softseg.nii.gz => sub-tokyoIngenia04_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tokyoIngenia04/anat/{sub-tokyoIngenia04_flip-2_mt-off_space-other_MTS_softseg.json => sub-tokyoIngenia04_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-tokyoIngenia04/anat/{sub-tokyoIngenia04_flip-2_mt-off_space-other_MTS_softseg.nii.gz => sub-tokyoIngenia04_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tokyoIngenia04/anat/{sub-tokyoIngenia04_space-other_T1w_softseg.json => sub-tokyoIngenia04_space-other_T1w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-tokyoIngenia04/anat/{sub-tokyoIngenia04_space-other_T1w_softseg.nii.gz => sub-tokyoIngenia04_space-other_T1w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tokyoIngenia04/anat/{sub-tokyoIngenia04_space-other_T2star_softseg.json => sub-tokyoIngenia04_space-other_T2star_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-tokyoIngenia04/anat/{sub-tokyoIngenia04_space-other_T2star_softseg.nii.gz => sub-tokyoIngenia04_space-other_T2star_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tokyoIngenia04/anat/{sub-tokyoIngenia04_space-other_T2w_softseg.json => sub-tokyoIngenia04_space-other_T2w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-tokyoIngenia04/anat/{sub-tokyoIngenia04_space-other_T2w_softseg.nii.gz => sub-tokyoIngenia04_space-other_T2w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tokyoIngenia04/dwi/{sub-tokyoIngenia04_rec-average_dwi_softseg.json => sub-tokyoIngenia04_rec-average_dwi_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-tokyoIngenia04/dwi/{sub-tokyoIngenia04_rec-average_dwi_softseg.nii.gz => sub-tokyoIngenia04_rec-average_dwi_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tokyoIngenia05/anat/{sub-tokyoIngenia05_flip-1_mt-on_space-other_MTS_softseg.json => sub-tokyoIngenia05_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-tokyoIngenia05/anat/{sub-tokyoIngenia05_flip-1_mt-on_space-other_MTS_softseg.nii.gz => sub-tokyoIngenia05_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tokyoIngenia05/anat/{sub-tokyoIngenia05_flip-2_mt-off_space-other_MTS_softseg.json => sub-tokyoIngenia05_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-tokyoIngenia05/anat/{sub-tokyoIngenia05_flip-2_mt-off_space-other_MTS_softseg.nii.gz => sub-tokyoIngenia05_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tokyoIngenia05/anat/{sub-tokyoIngenia05_space-other_T1w_softseg.json => sub-tokyoIngenia05_space-other_T1w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-tokyoIngenia05/anat/{sub-tokyoIngenia05_space-other_T1w_softseg.nii.gz => sub-tokyoIngenia05_space-other_T1w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tokyoIngenia05/anat/{sub-tokyoIngenia05_space-other_T2star_softseg.json => sub-tokyoIngenia05_space-other_T2star_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-tokyoIngenia05/anat/{sub-tokyoIngenia05_space-other_T2star_softseg.nii.gz => sub-tokyoIngenia05_space-other_T2star_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tokyoIngenia05/anat/{sub-tokyoIngenia05_space-other_T2w_softseg.json => sub-tokyoIngenia05_space-other_T2w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-tokyoIngenia05/anat/{sub-tokyoIngenia05_space-other_T2w_softseg.nii.gz => sub-tokyoIngenia05_space-other_T2w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tokyoIngenia05/dwi/{sub-tokyoIngenia05_rec-average_dwi_softseg.json => sub-tokyoIngenia05_rec-average_dwi_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-tokyoIngenia05/dwi/{sub-tokyoIngenia05_rec-average_dwi_softseg.nii.gz => sub-tokyoIngenia05_rec-average_dwi_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tokyoIngenia06/anat/{sub-tokyoIngenia06_flip-1_mt-on_space-other_MTS_softseg.json => sub-tokyoIngenia06_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-tokyoIngenia06/anat/{sub-tokyoIngenia06_flip-1_mt-on_space-other_MTS_softseg.nii.gz => sub-tokyoIngenia06_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tokyoIngenia06/anat/{sub-tokyoIngenia06_flip-2_mt-off_space-other_MTS_softseg.json => sub-tokyoIngenia06_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-tokyoIngenia06/anat/{sub-tokyoIngenia06_flip-2_mt-off_space-other_MTS_softseg.nii.gz => sub-tokyoIngenia06_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tokyoIngenia06/anat/{sub-tokyoIngenia06_space-other_T1w_softseg.json => sub-tokyoIngenia06_space-other_T1w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-tokyoIngenia06/anat/{sub-tokyoIngenia06_space-other_T1w_softseg.nii.gz => sub-tokyoIngenia06_space-other_T1w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tokyoIngenia06/anat/{sub-tokyoIngenia06_space-other_T2star_softseg.json => sub-tokyoIngenia06_space-other_T2star_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-tokyoIngenia06/anat/{sub-tokyoIngenia06_space-other_T2star_softseg.nii.gz => sub-tokyoIngenia06_space-other_T2star_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tokyoIngenia06/anat/{sub-tokyoIngenia06_space-other_T2w_softseg.json => sub-tokyoIngenia06_space-other_T2w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-tokyoIngenia06/anat/{sub-tokyoIngenia06_space-other_T2w_softseg.nii.gz => sub-tokyoIngenia06_space-other_T2w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tokyoIngenia06/dwi/{sub-tokyoIngenia06_rec-average_dwi_softseg.json => sub-tokyoIngenia06_rec-average_dwi_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-tokyoIngenia06/dwi/{sub-tokyoIngenia06_rec-average_dwi_softseg.nii.gz => sub-tokyoIngenia06_rec-average_dwi_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tokyoIngenia07/anat/{sub-tokyoIngenia07_flip-1_mt-on_space-other_MTS_softseg.json => sub-tokyoIngenia07_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-tokyoIngenia07/anat/{sub-tokyoIngenia07_flip-1_mt-on_space-other_MTS_softseg.nii.gz => sub-tokyoIngenia07_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tokyoIngenia07/anat/{sub-tokyoIngenia07_flip-2_mt-off_space-other_MTS_softseg.json => sub-tokyoIngenia07_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-tokyoIngenia07/anat/{sub-tokyoIngenia07_flip-2_mt-off_space-other_MTS_softseg.nii.gz => sub-tokyoIngenia07_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tokyoIngenia07/anat/{sub-tokyoIngenia07_space-other_T1w_softseg.json => sub-tokyoIngenia07_space-other_T1w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-tokyoIngenia07/anat/{sub-tokyoIngenia07_space-other_T1w_softseg.nii.gz => sub-tokyoIngenia07_space-other_T1w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tokyoIngenia07/anat/{sub-tokyoIngenia07_space-other_T2star_softseg.json => sub-tokyoIngenia07_space-other_T2star_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-tokyoIngenia07/anat/{sub-tokyoIngenia07_space-other_T2star_softseg.nii.gz => sub-tokyoIngenia07_space-other_T2star_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tokyoIngenia07/anat/{sub-tokyoIngenia07_space-other_T2w_softseg.json => sub-tokyoIngenia07_space-other_T2w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-tokyoIngenia07/anat/{sub-tokyoIngenia07_space-other_T2w_softseg.nii.gz => sub-tokyoIngenia07_space-other_T2w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tokyoIngenia07/dwi/{sub-tokyoIngenia07_rec-average_dwi_softseg.json => sub-tokyoIngenia07_rec-average_dwi_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-tokyoIngenia07/dwi/{sub-tokyoIngenia07_rec-average_dwi_softseg.nii.gz => sub-tokyoIngenia07_rec-average_dwi_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tokyoSkyra01/anat/{sub-tokyoSkyra01_flip-1_mt-on_space-other_MTS_softseg.json => sub-tokyoSkyra01_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-tokyoSkyra01/anat/{sub-tokyoSkyra01_flip-1_mt-on_space-other_MTS_softseg.nii.gz => sub-tokyoSkyra01_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tokyoSkyra01/anat/{sub-tokyoSkyra01_flip-2_mt-off_space-other_MTS_softseg.json => sub-tokyoSkyra01_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-tokyoSkyra01/anat/{sub-tokyoSkyra01_flip-2_mt-off_space-other_MTS_softseg.nii.gz => sub-tokyoSkyra01_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tokyoSkyra01/anat/{sub-tokyoSkyra01_space-other_T1w_softseg.json => sub-tokyoSkyra01_space-other_T1w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-tokyoSkyra01/anat/{sub-tokyoSkyra01_space-other_T1w_softseg.nii.gz => sub-tokyoSkyra01_space-other_T1w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tokyoSkyra01/anat/{sub-tokyoSkyra01_space-other_T2star_softseg.json => sub-tokyoSkyra01_space-other_T2star_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-tokyoSkyra01/anat/{sub-tokyoSkyra01_space-other_T2star_softseg.nii.gz => sub-tokyoSkyra01_space-other_T2star_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tokyoSkyra01/anat/{sub-tokyoSkyra01_space-other_T2w_softseg.json => sub-tokyoSkyra01_space-other_T2w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-tokyoSkyra01/anat/{sub-tokyoSkyra01_space-other_T2w_softseg.nii.gz => sub-tokyoSkyra01_space-other_T2w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tokyoSkyra01/dwi/{sub-tokyoSkyra01_rec-average_dwi_softseg.json => sub-tokyoSkyra01_rec-average_dwi_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-tokyoSkyra01/dwi/{sub-tokyoSkyra01_rec-average_dwi_softseg.nii.gz => sub-tokyoSkyra01_rec-average_dwi_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tokyoSkyra02/anat/{sub-tokyoSkyra02_flip-1_mt-on_space-other_MTS_softseg.json => sub-tokyoSkyra02_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-tokyoSkyra02/anat/{sub-tokyoSkyra02_flip-1_mt-on_space-other_MTS_softseg.nii.gz => sub-tokyoSkyra02_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tokyoSkyra02/anat/{sub-tokyoSkyra02_flip-2_mt-off_space-other_MTS_softseg.json => sub-tokyoSkyra02_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-tokyoSkyra02/anat/{sub-tokyoSkyra02_flip-2_mt-off_space-other_MTS_softseg.nii.gz => sub-tokyoSkyra02_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tokyoSkyra02/anat/{sub-tokyoSkyra02_space-other_T1w_softseg.json => sub-tokyoSkyra02_space-other_T1w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-tokyoSkyra02/anat/{sub-tokyoSkyra02_space-other_T1w_softseg.nii.gz => sub-tokyoSkyra02_space-other_T1w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tokyoSkyra02/anat/{sub-tokyoSkyra02_space-other_T2star_softseg.json => sub-tokyoSkyra02_space-other_T2star_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-tokyoSkyra02/anat/{sub-tokyoSkyra02_space-other_T2star_softseg.nii.gz => sub-tokyoSkyra02_space-other_T2star_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tokyoSkyra02/anat/{sub-tokyoSkyra02_space-other_T2w_softseg.json => sub-tokyoSkyra02_space-other_T2w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-tokyoSkyra02/anat/{sub-tokyoSkyra02_space-other_T2w_softseg.nii.gz => sub-tokyoSkyra02_space-other_T2w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tokyoSkyra02/dwi/{sub-tokyoSkyra02_rec-average_dwi_softseg.json => sub-tokyoSkyra02_rec-average_dwi_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-tokyoSkyra02/dwi/{sub-tokyoSkyra02_rec-average_dwi_softseg.nii.gz => sub-tokyoSkyra02_rec-average_dwi_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tokyoSkyra03/anat/{sub-tokyoSkyra03_flip-1_mt-on_space-other_MTS_softseg.json => sub-tokyoSkyra03_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-tokyoSkyra03/anat/{sub-tokyoSkyra03_flip-1_mt-on_space-other_MTS_softseg.nii.gz => sub-tokyoSkyra03_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tokyoSkyra03/anat/{sub-tokyoSkyra03_flip-2_mt-off_space-other_MTS_softseg.json => sub-tokyoSkyra03_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-tokyoSkyra03/anat/{sub-tokyoSkyra03_flip-2_mt-off_space-other_MTS_softseg.nii.gz => sub-tokyoSkyra03_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tokyoSkyra03/anat/{sub-tokyoSkyra03_space-other_T1w_softseg.json => sub-tokyoSkyra03_space-other_T1w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-tokyoSkyra03/anat/{sub-tokyoSkyra03_space-other_T1w_softseg.nii.gz => sub-tokyoSkyra03_space-other_T1w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tokyoSkyra03/anat/{sub-tokyoSkyra03_space-other_T2star_softseg.json => sub-tokyoSkyra03_space-other_T2star_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-tokyoSkyra03/anat/{sub-tokyoSkyra03_space-other_T2star_softseg.nii.gz => sub-tokyoSkyra03_space-other_T2star_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tokyoSkyra03/anat/{sub-tokyoSkyra03_space-other_T2w_softseg.json => sub-tokyoSkyra03_space-other_T2w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-tokyoSkyra03/anat/{sub-tokyoSkyra03_space-other_T2w_softseg.nii.gz => sub-tokyoSkyra03_space-other_T2w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tokyoSkyra03/dwi/{sub-tokyoSkyra03_rec-average_dwi_softseg.json => sub-tokyoSkyra03_rec-average_dwi_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-tokyoSkyra03/dwi/{sub-tokyoSkyra03_rec-average_dwi_softseg.nii.gz => sub-tokyoSkyra03_rec-average_dwi_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tokyoSkyra04/anat/{sub-tokyoSkyra04_flip-1_mt-on_space-other_MTS_softseg.json => sub-tokyoSkyra04_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-tokyoSkyra04/anat/{sub-tokyoSkyra04_flip-1_mt-on_space-other_MTS_softseg.nii.gz => sub-tokyoSkyra04_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tokyoSkyra04/anat/{sub-tokyoSkyra04_flip-2_mt-off_space-other_MTS_softseg.json => sub-tokyoSkyra04_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-tokyoSkyra04/anat/{sub-tokyoSkyra04_flip-2_mt-off_space-other_MTS_softseg.nii.gz => sub-tokyoSkyra04_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tokyoSkyra04/anat/{sub-tokyoSkyra04_space-other_T1w_softseg.json => sub-tokyoSkyra04_space-other_T1w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-tokyoSkyra04/anat/{sub-tokyoSkyra04_space-other_T1w_softseg.nii.gz => sub-tokyoSkyra04_space-other_T1w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tokyoSkyra04/anat/{sub-tokyoSkyra04_space-other_T2star_softseg.json => sub-tokyoSkyra04_space-other_T2star_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-tokyoSkyra04/anat/{sub-tokyoSkyra04_space-other_T2star_softseg.nii.gz => sub-tokyoSkyra04_space-other_T2star_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tokyoSkyra04/anat/{sub-tokyoSkyra04_space-other_T2w_softseg.json => sub-tokyoSkyra04_space-other_T2w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-tokyoSkyra04/anat/{sub-tokyoSkyra04_space-other_T2w_softseg.nii.gz => sub-tokyoSkyra04_space-other_T2w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tokyoSkyra04/dwi/{sub-tokyoSkyra04_rec-average_dwi_softseg.json => sub-tokyoSkyra04_rec-average_dwi_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-tokyoSkyra04/dwi/{sub-tokyoSkyra04_rec-average_dwi_softseg.nii.gz => sub-tokyoSkyra04_rec-average_dwi_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tokyoSkyra05/anat/{sub-tokyoSkyra05_flip-1_mt-on_space-other_MTS_softseg.json => sub-tokyoSkyra05_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-tokyoSkyra05/anat/{sub-tokyoSkyra05_flip-1_mt-on_space-other_MTS_softseg.nii.gz => sub-tokyoSkyra05_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tokyoSkyra05/anat/{sub-tokyoSkyra05_flip-2_mt-off_space-other_MTS_softseg.json => sub-tokyoSkyra05_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-tokyoSkyra05/anat/{sub-tokyoSkyra05_flip-2_mt-off_space-other_MTS_softseg.nii.gz => sub-tokyoSkyra05_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tokyoSkyra05/anat/{sub-tokyoSkyra05_space-other_T1w_softseg.json => sub-tokyoSkyra05_space-other_T1w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-tokyoSkyra05/anat/{sub-tokyoSkyra05_space-other_T1w_softseg.nii.gz => sub-tokyoSkyra05_space-other_T1w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tokyoSkyra05/anat/{sub-tokyoSkyra05_space-other_T2star_softseg.json => sub-tokyoSkyra05_space-other_T2star_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-tokyoSkyra05/anat/{sub-tokyoSkyra05_space-other_T2star_softseg.nii.gz => sub-tokyoSkyra05_space-other_T2star_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tokyoSkyra05/anat/{sub-tokyoSkyra05_space-other_T2w_softseg.json => sub-tokyoSkyra05_space-other_T2w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-tokyoSkyra05/anat/{sub-tokyoSkyra05_space-other_T2w_softseg.nii.gz => sub-tokyoSkyra05_space-other_T2w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tokyoSkyra05/dwi/{sub-tokyoSkyra05_rec-average_dwi_softseg.json => sub-tokyoSkyra05_rec-average_dwi_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-tokyoSkyra05/dwi/{sub-tokyoSkyra05_rec-average_dwi_softseg.nii.gz => sub-tokyoSkyra05_rec-average_dwi_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tokyoSkyra06/anat/{sub-tokyoSkyra06_flip-1_mt-on_space-other_MTS_softseg.json => sub-tokyoSkyra06_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-tokyoSkyra06/anat/{sub-tokyoSkyra06_flip-1_mt-on_space-other_MTS_softseg.nii.gz => sub-tokyoSkyra06_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tokyoSkyra06/anat/{sub-tokyoSkyra06_flip-2_mt-off_space-other_MTS_softseg.json => sub-tokyoSkyra06_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-tokyoSkyra06/anat/{sub-tokyoSkyra06_flip-2_mt-off_space-other_MTS_softseg.nii.gz => sub-tokyoSkyra06_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tokyoSkyra06/anat/{sub-tokyoSkyra06_space-other_T1w_softseg.json => sub-tokyoSkyra06_space-other_T1w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-tokyoSkyra06/anat/{sub-tokyoSkyra06_space-other_T1w_softseg.nii.gz => sub-tokyoSkyra06_space-other_T1w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tokyoSkyra06/anat/{sub-tokyoSkyra06_space-other_T2star_softseg.json => sub-tokyoSkyra06_space-other_T2star_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-tokyoSkyra06/anat/{sub-tokyoSkyra06_space-other_T2star_softseg.nii.gz => sub-tokyoSkyra06_space-other_T2star_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tokyoSkyra06/anat/{sub-tokyoSkyra06_space-other_T2w_softseg.json => sub-tokyoSkyra06_space-other_T2w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-tokyoSkyra06/anat/{sub-tokyoSkyra06_space-other_T2w_softseg.nii.gz => sub-tokyoSkyra06_space-other_T2w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tokyoSkyra06/dwi/{sub-tokyoSkyra06_rec-average_dwi_softseg.json => sub-tokyoSkyra06_rec-average_dwi_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-tokyoSkyra06/dwi/{sub-tokyoSkyra06_rec-average_dwi_softseg.nii.gz => sub-tokyoSkyra06_rec-average_dwi_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tokyoSkyra07/anat/{sub-tokyoSkyra07_flip-1_mt-on_space-other_MTS_softseg.json => sub-tokyoSkyra07_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-tokyoSkyra07/anat/{sub-tokyoSkyra07_flip-1_mt-on_space-other_MTS_softseg.nii.gz => sub-tokyoSkyra07_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tokyoSkyra07/anat/{sub-tokyoSkyra07_flip-2_mt-off_space-other_MTS_softseg.json => sub-tokyoSkyra07_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-tokyoSkyra07/anat/{sub-tokyoSkyra07_flip-2_mt-off_space-other_MTS_softseg.nii.gz => sub-tokyoSkyra07_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tokyoSkyra07/anat/{sub-tokyoSkyra07_space-other_T1w_softseg.json => sub-tokyoSkyra07_space-other_T1w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-tokyoSkyra07/anat/{sub-tokyoSkyra07_space-other_T1w_softseg.nii.gz => sub-tokyoSkyra07_space-other_T1w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tokyoSkyra07/anat/{sub-tokyoSkyra07_space-other_T2star_softseg.json => sub-tokyoSkyra07_space-other_T2star_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-tokyoSkyra07/anat/{sub-tokyoSkyra07_space-other_T2star_softseg.nii.gz => sub-tokyoSkyra07_space-other_T2star_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tokyoSkyra07/anat/{sub-tokyoSkyra07_space-other_T2w_softseg.json => sub-tokyoSkyra07_space-other_T2w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-tokyoSkyra07/anat/{sub-tokyoSkyra07_space-other_T2w_softseg.nii.gz => sub-tokyoSkyra07_space-other_T2w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-tokyoSkyra07/dwi/{sub-tokyoSkyra07_rec-average_dwi_softseg.json => sub-tokyoSkyra07_rec-average_dwi_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-tokyoSkyra07/dwi/{sub-tokyoSkyra07_rec-average_dwi_softseg.nii.gz => sub-tokyoSkyra07_rec-average_dwi_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-ubc01/anat/{sub-ubc01_flip-1_mt-on_space-other_MTS_softseg.json => sub-ubc01_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-ubc01/anat/{sub-ubc01_flip-1_mt-on_space-other_MTS_softseg.nii.gz => sub-ubc01_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-ubc01/anat/{sub-ubc01_space-other_T1w_softseg.json => sub-ubc01_space-other_T1w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-ubc01/anat/{sub-ubc01_space-other_T1w_softseg.nii.gz => sub-ubc01_space-other_T1w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-ubc01/anat/{sub-ubc01_space-other_T2star_softseg.json => sub-ubc01_space-other_T2star_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-ubc01/anat/{sub-ubc01_space-other_T2star_softseg.nii.gz => sub-ubc01_space-other_T2star_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-ubc01/anat/{sub-ubc01_space-other_T2w_softseg.json => sub-ubc01_space-other_T2w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-ubc01/anat/{sub-ubc01_space-other_T2w_softseg.nii.gz => sub-ubc01_space-other_T2w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-ubc01/dwi/{sub-ubc01_rec-average_dwi_softseg.json => sub-ubc01_rec-average_dwi_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-ubc01/dwi/{sub-ubc01_rec-average_dwi_softseg.nii.gz => sub-ubc01_rec-average_dwi_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-ubc02/anat/{sub-ubc02_flip-1_mt-on_space-other_MTS_softseg.json => sub-ubc02_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-ubc02/anat/{sub-ubc02_flip-1_mt-on_space-other_MTS_softseg.nii.gz => sub-ubc02_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-ubc02/anat/{sub-ubc02_flip-2_mt-off_space-other_MTS_softseg.json => sub-ubc02_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-ubc02/anat/{sub-ubc02_flip-2_mt-off_space-other_MTS_softseg.nii.gz => sub-ubc02_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-ubc02/anat/{sub-ubc02_space-other_T1w_softseg.json => sub-ubc02_space-other_T1w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-ubc02/anat/{sub-ubc02_space-other_T1w_softseg.nii.gz => sub-ubc02_space-other_T1w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-ubc02/anat/{sub-ubc02_space-other_T2star_softseg.json => sub-ubc02_space-other_T2star_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-ubc02/anat/{sub-ubc02_space-other_T2star_softseg.nii.gz => sub-ubc02_space-other_T2star_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-ubc02/anat/{sub-ubc02_space-other_T2w_softseg.json => sub-ubc02_space-other_T2w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-ubc02/anat/{sub-ubc02_space-other_T2w_softseg.nii.gz => sub-ubc02_space-other_T2w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-ubc02/dwi/{sub-ubc02_rec-average_dwi_softseg.json => sub-ubc02_rec-average_dwi_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-ubc02/dwi/{sub-ubc02_rec-average_dwi_softseg.nii.gz => sub-ubc02_rec-average_dwi_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-ubc03/anat/{sub-ubc03_flip-1_mt-on_space-other_MTS_softseg.json => sub-ubc03_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-ubc03/anat/{sub-ubc03_flip-1_mt-on_space-other_MTS_softseg.nii.gz => sub-ubc03_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-ubc03/anat/{sub-ubc03_flip-2_mt-off_space-other_MTS_softseg.json => sub-ubc03_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-ubc03/anat/{sub-ubc03_flip-2_mt-off_space-other_MTS_softseg.nii.gz => sub-ubc03_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-ubc03/anat/{sub-ubc03_space-other_T1w_softseg.json => sub-ubc03_space-other_T1w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-ubc03/anat/{sub-ubc03_space-other_T1w_softseg.nii.gz => sub-ubc03_space-other_T1w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-ubc03/anat/{sub-ubc03_space-other_T2star_softseg.json => sub-ubc03_space-other_T2star_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-ubc03/anat/{sub-ubc03_space-other_T2star_softseg.nii.gz => sub-ubc03_space-other_T2star_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-ubc03/anat/{sub-ubc03_space-other_T2w_softseg.json => sub-ubc03_space-other_T2w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-ubc03/anat/{sub-ubc03_space-other_T2w_softseg.nii.gz => sub-ubc03_space-other_T2w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-ubc03/dwi/{sub-ubc03_rec-average_dwi_softseg.json => sub-ubc03_rec-average_dwi_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-ubc03/dwi/{sub-ubc03_rec-average_dwi_softseg.nii.gz => sub-ubc03_rec-average_dwi_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-ubc04/anat/{sub-ubc04_flip-1_mt-on_space-other_MTS_softseg.json => sub-ubc04_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-ubc04/anat/{sub-ubc04_flip-1_mt-on_space-other_MTS_softseg.nii.gz => sub-ubc04_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-ubc04/anat/{sub-ubc04_flip-2_mt-off_space-other_MTS_softseg.json => sub-ubc04_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-ubc04/anat/{sub-ubc04_flip-2_mt-off_space-other_MTS_softseg.nii.gz => sub-ubc04_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-ubc04/anat/{sub-ubc04_space-other_T1w_softseg.json => sub-ubc04_space-other_T1w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-ubc04/anat/{sub-ubc04_space-other_T1w_softseg.nii.gz => sub-ubc04_space-other_T1w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-ubc04/anat/{sub-ubc04_space-other_T2star_softseg.json => sub-ubc04_space-other_T2star_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-ubc04/anat/{sub-ubc04_space-other_T2star_softseg.nii.gz => sub-ubc04_space-other_T2star_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-ubc04/anat/{sub-ubc04_space-other_T2w_softseg.json => sub-ubc04_space-other_T2w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-ubc04/anat/{sub-ubc04_space-other_T2w_softseg.nii.gz => sub-ubc04_space-other_T2w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-ubc04/dwi/{sub-ubc04_rec-average_dwi_softseg.json => sub-ubc04_rec-average_dwi_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-ubc04/dwi/{sub-ubc04_rec-average_dwi_softseg.nii.gz => sub-ubc04_rec-average_dwi_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-ubc05/anat/{sub-ubc05_flip-1_mt-on_space-other_MTS_softseg.json => sub-ubc05_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-ubc05/anat/{sub-ubc05_flip-1_mt-on_space-other_MTS_softseg.nii.gz => sub-ubc05_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-ubc05/anat/{sub-ubc05_flip-2_mt-off_space-other_MTS_softseg.json => sub-ubc05_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-ubc05/anat/{sub-ubc05_flip-2_mt-off_space-other_MTS_softseg.nii.gz => sub-ubc05_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-ubc05/anat/{sub-ubc05_space-other_T1w_softseg.json => sub-ubc05_space-other_T1w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-ubc05/anat/{sub-ubc05_space-other_T1w_softseg.nii.gz => sub-ubc05_space-other_T1w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-ubc05/anat/{sub-ubc05_space-other_T2star_softseg.json => sub-ubc05_space-other_T2star_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-ubc05/anat/{sub-ubc05_space-other_T2star_softseg.nii.gz => sub-ubc05_space-other_T2star_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-ubc05/anat/{sub-ubc05_space-other_T2w_softseg.json => sub-ubc05_space-other_T2w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-ubc05/anat/{sub-ubc05_space-other_T2w_softseg.nii.gz => sub-ubc05_space-other_T2w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-ubc05/dwi/{sub-ubc05_rec-average_dwi_softseg.json => sub-ubc05_rec-average_dwi_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-ubc05/dwi/{sub-ubc05_rec-average_dwi_softseg.nii.gz => sub-ubc05_rec-average_dwi_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-ubc06/anat/{sub-ubc06_flip-1_mt-on_space-other_MTS_softseg.json => sub-ubc06_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-ubc06/anat/{sub-ubc06_flip-1_mt-on_space-other_MTS_softseg.nii.gz => sub-ubc06_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-ubc06/anat/{sub-ubc06_flip-2_mt-off_space-other_MTS_softseg.json => sub-ubc06_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-ubc06/anat/{sub-ubc06_flip-2_mt-off_space-other_MTS_softseg.nii.gz => sub-ubc06_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-ubc06/anat/{sub-ubc06_space-other_T1w_softseg.json => sub-ubc06_space-other_T1w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-ubc06/anat/{sub-ubc06_space-other_T1w_softseg.nii.gz => sub-ubc06_space-other_T1w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-ubc06/anat/{sub-ubc06_space-other_T2star_softseg.json => sub-ubc06_space-other_T2star_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-ubc06/anat/{sub-ubc06_space-other_T2star_softseg.nii.gz => sub-ubc06_space-other_T2star_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-ubc06/anat/{sub-ubc06_space-other_T2w_softseg.json => sub-ubc06_space-other_T2w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-ubc06/anat/{sub-ubc06_space-other_T2w_softseg.nii.gz => sub-ubc06_space-other_T2w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-ubc06/dwi/{sub-ubc06_rec-average_dwi_softseg.json => sub-ubc06_rec-average_dwi_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-ubc06/dwi/{sub-ubc06_rec-average_dwi_softseg.nii.gz => sub-ubc06_rec-average_dwi_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-ucdavis01/anat/{sub-ucdavis01_flip-1_mt-on_space-other_MTS_softseg.json => sub-ucdavis01_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-ucdavis01/anat/{sub-ucdavis01_flip-1_mt-on_space-other_MTS_softseg.nii.gz => sub-ucdavis01_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-ucdavis01/anat/{sub-ucdavis01_flip-2_mt-off_space-other_MTS_softseg.json => sub-ucdavis01_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-ucdavis01/anat/{sub-ucdavis01_flip-2_mt-off_space-other_MTS_softseg.nii.gz => sub-ucdavis01_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-ucdavis01/anat/{sub-ucdavis01_space-other_T1w_softseg.json => sub-ucdavis01_space-other_T1w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-ucdavis01/anat/{sub-ucdavis01_space-other_T1w_softseg.nii.gz => sub-ucdavis01_space-other_T1w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-ucdavis01/anat/{sub-ucdavis01_space-other_T2star_softseg.json => sub-ucdavis01_space-other_T2star_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-ucdavis01/anat/{sub-ucdavis01_space-other_T2star_softseg.nii.gz => sub-ucdavis01_space-other_T2star_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-ucdavis01/anat/{sub-ucdavis01_space-other_T2w_softseg.json => sub-ucdavis01_space-other_T2w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-ucdavis01/anat/{sub-ucdavis01_space-other_T2w_softseg.nii.gz => sub-ucdavis01_space-other_T2w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-ucdavis02/anat/{sub-ucdavis02_flip-1_mt-on_space-other_MTS_softseg.json => sub-ucdavis02_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-ucdavis02/anat/{sub-ucdavis02_flip-1_mt-on_space-other_MTS_softseg.nii.gz => sub-ucdavis02_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-ucdavis02/anat/{sub-ucdavis02_flip-2_mt-off_space-other_MTS_softseg.json => sub-ucdavis02_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-ucdavis02/anat/{sub-ucdavis02_flip-2_mt-off_space-other_MTS_softseg.nii.gz => sub-ucdavis02_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-ucdavis02/anat/{sub-ucdavis02_space-other_T1w_softseg.json => sub-ucdavis02_space-other_T1w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-ucdavis02/anat/{sub-ucdavis02_space-other_T1w_softseg.nii.gz => sub-ucdavis02_space-other_T1w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-ucdavis02/anat/{sub-ucdavis02_space-other_T2star_softseg.json => sub-ucdavis02_space-other_T2star_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-ucdavis02/anat/{sub-ucdavis02_space-other_T2star_softseg.nii.gz => sub-ucdavis02_space-other_T2star_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-ucdavis02/anat/{sub-ucdavis02_space-other_T2w_softseg.json => sub-ucdavis02_space-other_T2w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-ucdavis02/anat/{sub-ucdavis02_space-other_T2w_softseg.nii.gz => sub-ucdavis02_space-other_T2w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-ucdavis03/anat/{sub-ucdavis03_flip-1_mt-on_space-other_MTS_softseg.json => sub-ucdavis03_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-ucdavis03/anat/{sub-ucdavis03_flip-1_mt-on_space-other_MTS_softseg.nii.gz => sub-ucdavis03_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-ucdavis03/anat/{sub-ucdavis03_space-other_T1w_softseg.json => sub-ucdavis03_space-other_T1w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-ucdavis03/anat/{sub-ucdavis03_space-other_T1w_softseg.nii.gz => sub-ucdavis03_space-other_T1w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-ucdavis03/anat/{sub-ucdavis03_space-other_T2star_softseg.json => sub-ucdavis03_space-other_T2star_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-ucdavis03/anat/{sub-ucdavis03_space-other_T2star_softseg.nii.gz => sub-ucdavis03_space-other_T2star_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-ucdavis03/anat/{sub-ucdavis03_space-other_T2w_softseg.json => sub-ucdavis03_space-other_T2w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-ucdavis03/anat/{sub-ucdavis03_space-other_T2w_softseg.nii.gz => sub-ucdavis03_space-other_T2w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-ucdavis03/dwi/{sub-ucdavis03_rec-average_dwi_softseg.json => sub-ucdavis03_rec-average_dwi_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-ucdavis03/dwi/{sub-ucdavis03_rec-average_dwi_softseg.nii.gz => sub-ucdavis03_rec-average_dwi_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-ucdavis04/anat/{sub-ucdavis04_flip-1_mt-on_space-other_MTS_softseg.json => sub-ucdavis04_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-ucdavis04/anat/{sub-ucdavis04_flip-1_mt-on_space-other_MTS_softseg.nii.gz => sub-ucdavis04_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-ucdavis04/anat/{sub-ucdavis04_flip-2_mt-off_space-other_MTS_softseg.json => sub-ucdavis04_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-ucdavis04/anat/{sub-ucdavis04_flip-2_mt-off_space-other_MTS_softseg.nii.gz => sub-ucdavis04_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-ucdavis04/anat/{sub-ucdavis04_space-other_T1w_softseg.json => sub-ucdavis04_space-other_T1w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-ucdavis04/anat/{sub-ucdavis04_space-other_T1w_softseg.nii.gz => sub-ucdavis04_space-other_T1w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-ucdavis04/anat/{sub-ucdavis04_space-other_T2star_softseg.json => sub-ucdavis04_space-other_T2star_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-ucdavis04/anat/{sub-ucdavis04_space-other_T2star_softseg.nii.gz => sub-ucdavis04_space-other_T2star_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-ucdavis04/anat/{sub-ucdavis04_space-other_T2w_softseg.json => sub-ucdavis04_space-other_T2w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-ucdavis04/anat/{sub-ucdavis04_space-other_T2w_softseg.nii.gz => sub-ucdavis04_space-other_T2w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-ucdavis05/anat/{sub-ucdavis05_flip-1_mt-on_space-other_MTS_softseg.json => sub-ucdavis05_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-ucdavis05/anat/{sub-ucdavis05_flip-1_mt-on_space-other_MTS_softseg.nii.gz => sub-ucdavis05_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-ucdavis05/anat/{sub-ucdavis05_space-other_T1w_softseg.json => sub-ucdavis05_space-other_T1w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-ucdavis05/anat/{sub-ucdavis05_space-other_T1w_softseg.nii.gz => sub-ucdavis05_space-other_T1w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-ucdavis05/anat/{sub-ucdavis05_space-other_T2star_softseg.json => sub-ucdavis05_space-other_T2star_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-ucdavis05/anat/{sub-ucdavis05_space-other_T2star_softseg.nii.gz => sub-ucdavis05_space-other_T2star_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-ucdavis05/anat/{sub-ucdavis05_space-other_T2w_softseg.json => sub-ucdavis05_space-other_T2w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-ucdavis05/anat/{sub-ucdavis05_space-other_T2w_softseg.nii.gz => sub-ucdavis05_space-other_T2w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-ucdavis05/dwi/{sub-ucdavis05_rec-average_dwi_softseg.json => sub-ucdavis05_rec-average_dwi_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-ucdavis05/dwi/{sub-ucdavis05_rec-average_dwi_softseg.nii.gz => sub-ucdavis05_rec-average_dwi_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-ucdavis06/anat/{sub-ucdavis06_flip-1_mt-on_space-other_MTS_softseg.json => sub-ucdavis06_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-ucdavis06/anat/{sub-ucdavis06_flip-1_mt-on_space-other_MTS_softseg.nii.gz => sub-ucdavis06_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-ucdavis06/anat/{sub-ucdavis06_space-other_T1w_softseg.json => sub-ucdavis06_space-other_T1w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-ucdavis06/anat/{sub-ucdavis06_space-other_T1w_softseg.nii.gz => sub-ucdavis06_space-other_T1w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-ucdavis06/anat/{sub-ucdavis06_space-other_T2star_softseg.json => sub-ucdavis06_space-other_T2star_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-ucdavis06/anat/{sub-ucdavis06_space-other_T2star_softseg.nii.gz => sub-ucdavis06_space-other_T2star_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-ucdavis06/anat/{sub-ucdavis06_space-other_T2w_softseg.json => sub-ucdavis06_space-other_T2w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-ucdavis06/anat/{sub-ucdavis06_space-other_T2w_softseg.nii.gz => sub-ucdavis06_space-other_T2w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-ucdavis06/dwi/{sub-ucdavis06_rec-average_dwi_softseg.json => sub-ucdavis06_rec-average_dwi_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-ucdavis06/dwi/{sub-ucdavis06_rec-average_dwi_softseg.nii.gz => sub-ucdavis06_rec-average_dwi_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-ucl01/anat/{sub-ucl01_flip-1_mt-on_space-other_MTS_softseg.json => sub-ucl01_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-ucl01/anat/{sub-ucl01_flip-1_mt-on_space-other_MTS_softseg.nii.gz => sub-ucl01_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-ucl01/anat/{sub-ucl01_flip-2_mt-off_space-other_MTS_softseg.json => sub-ucl01_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-ucl01/anat/{sub-ucl01_flip-2_mt-off_space-other_MTS_softseg.nii.gz => sub-ucl01_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-ucl01/anat/{sub-ucl01_space-other_T1w_softseg.json => sub-ucl01_space-other_T1w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-ucl01/anat/{sub-ucl01_space-other_T1w_softseg.nii.gz => sub-ucl01_space-other_T1w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-ucl01/anat/{sub-ucl01_space-other_T2star_softseg.json => sub-ucl01_space-other_T2star_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-ucl01/anat/{sub-ucl01_space-other_T2star_softseg.nii.gz => sub-ucl01_space-other_T2star_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-ucl01/anat/{sub-ucl01_space-other_T2w_softseg.json => sub-ucl01_space-other_T2w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-ucl01/anat/{sub-ucl01_space-other_T2w_softseg.nii.gz => sub-ucl01_space-other_T2w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-ucl01/dwi/{sub-ucl01_rec-average_dwi_softseg.json => sub-ucl01_rec-average_dwi_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-ucl01/dwi/{sub-ucl01_rec-average_dwi_softseg.nii.gz => sub-ucl01_rec-average_dwi_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-ucl02/anat/{sub-ucl02_flip-1_mt-on_space-other_MTS_softseg.json => sub-ucl02_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-ucl02/anat/{sub-ucl02_flip-1_mt-on_space-other_MTS_softseg.nii.gz => sub-ucl02_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-ucl02/anat/{sub-ucl02_flip-2_mt-off_space-other_MTS_softseg.json => sub-ucl02_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-ucl02/anat/{sub-ucl02_flip-2_mt-off_space-other_MTS_softseg.nii.gz => sub-ucl02_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-ucl02/anat/{sub-ucl02_space-other_T1w_softseg.json => sub-ucl02_space-other_T1w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-ucl02/anat/{sub-ucl02_space-other_T1w_softseg.nii.gz => sub-ucl02_space-other_T1w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-ucl02/anat/{sub-ucl02_space-other_T2star_softseg.json => sub-ucl02_space-other_T2star_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-ucl02/anat/{sub-ucl02_space-other_T2star_softseg.nii.gz => sub-ucl02_space-other_T2star_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-ucl02/anat/{sub-ucl02_space-other_T2w_softseg.json => sub-ucl02_space-other_T2w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-ucl02/anat/{sub-ucl02_space-other_T2w_softseg.nii.gz => sub-ucl02_space-other_T2w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-ucl02/dwi/{sub-ucl02_rec-average_dwi_softseg.json => sub-ucl02_rec-average_dwi_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-ucl02/dwi/{sub-ucl02_rec-average_dwi_softseg.nii.gz => sub-ucl02_rec-average_dwi_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-ucl03/anat/{sub-ucl03_flip-1_mt-on_space-other_MTS_softseg.json => sub-ucl03_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-ucl03/anat/{sub-ucl03_flip-1_mt-on_space-other_MTS_softseg.nii.gz => sub-ucl03_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-ucl03/anat/{sub-ucl03_flip-2_mt-off_space-other_MTS_softseg.json => sub-ucl03_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-ucl03/anat/{sub-ucl03_flip-2_mt-off_space-other_MTS_softseg.nii.gz => sub-ucl03_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-ucl03/anat/{sub-ucl03_space-other_T1w_softseg.json => sub-ucl03_space-other_T1w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-ucl03/anat/{sub-ucl03_space-other_T1w_softseg.nii.gz => sub-ucl03_space-other_T1w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-ucl03/anat/{sub-ucl03_space-other_T2star_softseg.json => sub-ucl03_space-other_T2star_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-ucl03/anat/{sub-ucl03_space-other_T2star_softseg.nii.gz => sub-ucl03_space-other_T2star_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-ucl03/anat/{sub-ucl03_space-other_T2w_softseg.json => sub-ucl03_space-other_T2w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-ucl03/anat/{sub-ucl03_space-other_T2w_softseg.nii.gz => sub-ucl03_space-other_T2w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-ucl03/dwi/{sub-ucl03_rec-average_dwi_softseg.json => sub-ucl03_rec-average_dwi_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-ucl03/dwi/{sub-ucl03_rec-average_dwi_softseg.nii.gz => sub-ucl03_rec-average_dwi_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-ucl04/anat/{sub-ucl04_flip-1_mt-on_space-other_MTS_softseg.json => sub-ucl04_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-ucl04/anat/{sub-ucl04_flip-1_mt-on_space-other_MTS_softseg.nii.gz => sub-ucl04_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-ucl04/anat/{sub-ucl04_flip-2_mt-off_space-other_MTS_softseg.json => sub-ucl04_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-ucl04/anat/{sub-ucl04_flip-2_mt-off_space-other_MTS_softseg.nii.gz => sub-ucl04_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-ucl04/anat/{sub-ucl04_space-other_T1w_softseg.json => sub-ucl04_space-other_T1w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-ucl04/anat/{sub-ucl04_space-other_T1w_softseg.nii.gz => sub-ucl04_space-other_T1w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-ucl04/anat/{sub-ucl04_space-other_T2star_softseg.json => sub-ucl04_space-other_T2star_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-ucl04/anat/{sub-ucl04_space-other_T2star_softseg.nii.gz => sub-ucl04_space-other_T2star_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-ucl04/anat/{sub-ucl04_space-other_T2w_softseg.json => sub-ucl04_space-other_T2w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-ucl04/anat/{sub-ucl04_space-other_T2w_softseg.nii.gz => sub-ucl04_space-other_T2w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-ucl04/dwi/{sub-ucl04_rec-average_dwi_softseg.json => sub-ucl04_rec-average_dwi_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-ucl04/dwi/{sub-ucl04_rec-average_dwi_softseg.nii.gz => sub-ucl04_rec-average_dwi_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-ucl05/anat/{sub-ucl05_flip-1_mt-on_space-other_MTS_softseg.json => sub-ucl05_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-ucl05/anat/{sub-ucl05_flip-1_mt-on_space-other_MTS_softseg.nii.gz => sub-ucl05_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-ucl05/anat/{sub-ucl05_flip-2_mt-off_space-other_MTS_softseg.json => sub-ucl05_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-ucl05/anat/{sub-ucl05_flip-2_mt-off_space-other_MTS_softseg.nii.gz => sub-ucl05_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-ucl05/anat/{sub-ucl05_space-other_T1w_softseg.json => sub-ucl05_space-other_T1w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-ucl05/anat/{sub-ucl05_space-other_T1w_softseg.nii.gz => sub-ucl05_space-other_T1w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-ucl05/anat/{sub-ucl05_space-other_T2star_softseg.json => sub-ucl05_space-other_T2star_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-ucl05/anat/{sub-ucl05_space-other_T2star_softseg.nii.gz => sub-ucl05_space-other_T2star_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-ucl05/anat/{sub-ucl05_space-other_T2w_softseg.json => sub-ucl05_space-other_T2w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-ucl05/anat/{sub-ucl05_space-other_T2w_softseg.nii.gz => sub-ucl05_space-other_T2w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-ucl05/dwi/{sub-ucl05_rec-average_dwi_softseg.json => sub-ucl05_rec-average_dwi_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-ucl05/dwi/{sub-ucl05_rec-average_dwi_softseg.nii.gz => sub-ucl05_rec-average_dwi_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-ucl06/anat/{sub-ucl06_flip-1_mt-on_space-other_MTS_softseg.json => sub-ucl06_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-ucl06/anat/{sub-ucl06_flip-1_mt-on_space-other_MTS_softseg.nii.gz => sub-ucl06_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-ucl06/anat/{sub-ucl06_flip-2_mt-off_space-other_MTS_softseg.json => sub-ucl06_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-ucl06/anat/{sub-ucl06_flip-2_mt-off_space-other_MTS_softseg.nii.gz => sub-ucl06_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-ucl06/anat/{sub-ucl06_space-other_T1w_softseg.json => sub-ucl06_space-other_T1w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-ucl06/anat/{sub-ucl06_space-other_T1w_softseg.nii.gz => sub-ucl06_space-other_T1w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-ucl06/anat/{sub-ucl06_space-other_T2star_softseg.json => sub-ucl06_space-other_T2star_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-ucl06/anat/{sub-ucl06_space-other_T2star_softseg.nii.gz => sub-ucl06_space-other_T2star_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-ucl06/anat/{sub-ucl06_space-other_T2w_softseg.json => sub-ucl06_space-other_T2w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-ucl06/anat/{sub-ucl06_space-other_T2w_softseg.nii.gz => sub-ucl06_space-other_T2w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-ucl06/dwi/{sub-ucl06_rec-average_dwi_softseg.json => sub-ucl06_rec-average_dwi_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-ucl06/dwi/{sub-ucl06_rec-average_dwi_softseg.nii.gz => sub-ucl06_rec-average_dwi_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-unf01/anat/{sub-unf01_flip-1_mt-on_space-other_MTS_softseg.json => sub-unf01_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-unf01/anat/{sub-unf01_flip-1_mt-on_space-other_MTS_softseg.nii.gz => sub-unf01_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-unf01/anat/{sub-unf01_flip-2_mt-off_space-other_MTS_softseg.json => sub-unf01_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-unf01/anat/{sub-unf01_flip-2_mt-off_space-other_MTS_softseg.nii.gz => sub-unf01_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-unf01/anat/{sub-unf01_space-other_T1w_softseg.json => sub-unf01_space-other_T1w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-unf01/anat/{sub-unf01_space-other_T1w_softseg.nii.gz => sub-unf01_space-other_T1w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-unf01/anat/{sub-unf01_space-other_T2star_softseg.json => sub-unf01_space-other_T2star_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-unf01/anat/{sub-unf01_space-other_T2star_softseg.nii.gz => sub-unf01_space-other_T2star_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-unf01/anat/{sub-unf01_space-other_T2w_softseg.json => sub-unf01_space-other_T2w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-unf01/anat/{sub-unf01_space-other_T2w_softseg.nii.gz => sub-unf01_space-other_T2w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-unf01/dwi/{sub-unf01_rec-average_dwi_softseg.json => sub-unf01_rec-average_dwi_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-unf01/dwi/{sub-unf01_rec-average_dwi_softseg.nii.gz => sub-unf01_rec-average_dwi_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-unf02/anat/{sub-unf02_flip-1_mt-on_space-other_MTS_softseg.json => sub-unf02_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-unf02/anat/{sub-unf02_flip-1_mt-on_space-other_MTS_softseg.nii.gz => sub-unf02_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-unf02/anat/{sub-unf02_flip-2_mt-off_space-other_MTS_softseg.json => sub-unf02_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-unf02/anat/{sub-unf02_flip-2_mt-off_space-other_MTS_softseg.nii.gz => sub-unf02_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-unf02/anat/{sub-unf02_space-other_T1w_softseg.json => sub-unf02_space-other_T1w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-unf02/anat/{sub-unf02_space-other_T1w_softseg.nii.gz => sub-unf02_space-other_T1w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-unf02/anat/{sub-unf02_space-other_T2star_softseg.json => sub-unf02_space-other_T2star_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-unf02/anat/{sub-unf02_space-other_T2star_softseg.nii.gz => sub-unf02_space-other_T2star_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-unf02/anat/{sub-unf02_space-other_T2w_softseg.json => sub-unf02_space-other_T2w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-unf02/anat/{sub-unf02_space-other_T2w_softseg.nii.gz => sub-unf02_space-other_T2w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-unf02/dwi/{sub-unf02_rec-average_dwi_softseg.json => sub-unf02_rec-average_dwi_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-unf02/dwi/{sub-unf02_rec-average_dwi_softseg.nii.gz => sub-unf02_rec-average_dwi_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-unf03/anat/{sub-unf03_flip-1_mt-on_space-other_MTS_softseg.json => sub-unf03_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-unf03/anat/{sub-unf03_flip-1_mt-on_space-other_MTS_softseg.nii.gz => sub-unf03_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-unf03/anat/{sub-unf03_flip-2_mt-off_space-other_MTS_softseg.json => sub-unf03_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-unf03/anat/{sub-unf03_flip-2_mt-off_space-other_MTS_softseg.nii.gz => sub-unf03_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-unf03/anat/{sub-unf03_space-other_T1w_softseg.json => sub-unf03_space-other_T1w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-unf03/anat/{sub-unf03_space-other_T1w_softseg.nii.gz => sub-unf03_space-other_T1w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-unf03/anat/{sub-unf03_space-other_T2star_softseg.json => sub-unf03_space-other_T2star_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-unf03/anat/{sub-unf03_space-other_T2star_softseg.nii.gz => sub-unf03_space-other_T2star_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-unf03/anat/{sub-unf03_space-other_T2w_softseg.json => sub-unf03_space-other_T2w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-unf03/anat/{sub-unf03_space-other_T2w_softseg.nii.gz => sub-unf03_space-other_T2w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-unf03/dwi/{sub-unf03_rec-average_dwi_softseg.json => sub-unf03_rec-average_dwi_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-unf03/dwi/{sub-unf03_rec-average_dwi_softseg.nii.gz => sub-unf03_rec-average_dwi_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-unf04/anat/{sub-unf04_flip-1_mt-on_space-other_MTS_softseg.json => sub-unf04_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-unf04/anat/{sub-unf04_flip-1_mt-on_space-other_MTS_softseg.nii.gz => sub-unf04_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-unf04/anat/{sub-unf04_flip-2_mt-off_space-other_MTS_softseg.json => sub-unf04_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-unf04/anat/{sub-unf04_flip-2_mt-off_space-other_MTS_softseg.nii.gz => sub-unf04_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-unf04/anat/{sub-unf04_space-other_T1w_softseg.json => sub-unf04_space-other_T1w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-unf04/anat/{sub-unf04_space-other_T1w_softseg.nii.gz => sub-unf04_space-other_T1w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-unf04/anat/{sub-unf04_space-other_T2star_softseg.json => sub-unf04_space-other_T2star_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-unf04/anat/{sub-unf04_space-other_T2star_softseg.nii.gz => sub-unf04_space-other_T2star_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-unf04/anat/{sub-unf04_space-other_T2w_softseg.json => sub-unf04_space-other_T2w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-unf04/anat/{sub-unf04_space-other_T2w_softseg.nii.gz => sub-unf04_space-other_T2w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-unf04/dwi/{sub-unf04_rec-average_dwi_softseg.json => sub-unf04_rec-average_dwi_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-unf04/dwi/{sub-unf04_rec-average_dwi_softseg.nii.gz => sub-unf04_rec-average_dwi_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-unf05/anat/{sub-unf05_flip-1_mt-on_space-other_MTS_softseg.json => sub-unf05_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-unf05/anat/{sub-unf05_flip-1_mt-on_space-other_MTS_softseg.nii.gz => sub-unf05_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-unf05/anat/{sub-unf05_flip-2_mt-off_space-other_MTS_softseg.json => sub-unf05_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-unf05/anat/{sub-unf05_flip-2_mt-off_space-other_MTS_softseg.nii.gz => sub-unf05_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-unf05/anat/{sub-unf05_space-other_T1w_softseg.json => sub-unf05_space-other_T1w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-unf05/anat/{sub-unf05_space-other_T1w_softseg.nii.gz => sub-unf05_space-other_T1w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-unf05/anat/{sub-unf05_space-other_T2star_softseg.json => sub-unf05_space-other_T2star_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-unf05/anat/{sub-unf05_space-other_T2star_softseg.nii.gz => sub-unf05_space-other_T2star_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-unf05/anat/{sub-unf05_space-other_T2w_softseg.json => sub-unf05_space-other_T2w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-unf05/anat/{sub-unf05_space-other_T2w_softseg.nii.gz => sub-unf05_space-other_T2w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-unf05/dwi/{sub-unf05_rec-average_dwi_softseg.json => sub-unf05_rec-average_dwi_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-unf05/dwi/{sub-unf05_rec-average_dwi_softseg.nii.gz => sub-unf05_rec-average_dwi_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-unf06/anat/{sub-unf06_flip-1_mt-on_space-other_MTS_softseg.json => sub-unf06_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-unf06/anat/{sub-unf06_flip-1_mt-on_space-other_MTS_softseg.nii.gz => sub-unf06_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-unf06/anat/{sub-unf06_flip-2_mt-off_space-other_MTS_softseg.json => sub-unf06_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-unf06/anat/{sub-unf06_flip-2_mt-off_space-other_MTS_softseg.nii.gz => sub-unf06_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-unf06/anat/{sub-unf06_space-other_T1w_softseg.json => sub-unf06_space-other_T1w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-unf06/anat/{sub-unf06_space-other_T1w_softseg.nii.gz => sub-unf06_space-other_T1w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-unf06/anat/{sub-unf06_space-other_T2star_softseg.json => sub-unf06_space-other_T2star_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-unf06/anat/{sub-unf06_space-other_T2star_softseg.nii.gz => sub-unf06_space-other_T2star_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-unf06/anat/{sub-unf06_space-other_T2w_softseg.json => sub-unf06_space-other_T2w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-unf06/anat/{sub-unf06_space-other_T2w_softseg.nii.gz => sub-unf06_space-other_T2w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-unf06/dwi/{sub-unf06_rec-average_dwi_softseg.json => sub-unf06_rec-average_dwi_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-unf06/dwi/{sub-unf06_rec-average_dwi_softseg.nii.gz => sub-unf06_rec-average_dwi_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-unf07/anat/{sub-unf07_flip-1_mt-on_space-other_MTS_softseg.json => sub-unf07_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-unf07/anat/{sub-unf07_flip-1_mt-on_space-other_MTS_softseg.nii.gz => sub-unf07_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-unf07/anat/{sub-unf07_flip-2_mt-off_space-other_MTS_softseg.json => sub-unf07_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-unf07/anat/{sub-unf07_flip-2_mt-off_space-other_MTS_softseg.nii.gz => sub-unf07_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-unf07/anat/{sub-unf07_space-other_T1w_softseg.json => sub-unf07_space-other_T1w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-unf07/anat/{sub-unf07_space-other_T1w_softseg.nii.gz => sub-unf07_space-other_T1w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-unf07/anat/{sub-unf07_space-other_T2star_softseg.json => sub-unf07_space-other_T2star_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-unf07/anat/{sub-unf07_space-other_T2star_softseg.nii.gz => sub-unf07_space-other_T2star_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-unf07/anat/{sub-unf07_space-other_T2w_softseg.json => sub-unf07_space-other_T2w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-unf07/anat/{sub-unf07_space-other_T2w_softseg.nii.gz => sub-unf07_space-other_T2w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-unf07/dwi/{sub-unf07_rec-average_dwi_softseg.json => sub-unf07_rec-average_dwi_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-unf07/dwi/{sub-unf07_rec-average_dwi_softseg.nii.gz => sub-unf07_rec-average_dwi_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-vallHebron01/anat/{sub-vallHebron01_flip-1_mt-on_space-other_MTS_softseg.json => sub-vallHebron01_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-vallHebron01/anat/{sub-vallHebron01_flip-1_mt-on_space-other_MTS_softseg.nii.gz => sub-vallHebron01_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-vallHebron01/anat/{sub-vallHebron01_flip-2_mt-off_space-other_MTS_softseg.json => sub-vallHebron01_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-vallHebron01/anat/{sub-vallHebron01_flip-2_mt-off_space-other_MTS_softseg.nii.gz => sub-vallHebron01_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-vallHebron01/anat/{sub-vallHebron01_space-other_T1w_softseg.json => sub-vallHebron01_space-other_T1w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-vallHebron01/anat/{sub-vallHebron01_space-other_T1w_softseg.nii.gz => sub-vallHebron01_space-other_T1w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-vallHebron01/anat/{sub-vallHebron01_space-other_T2star_softseg.json => sub-vallHebron01_space-other_T2star_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-vallHebron01/anat/{sub-vallHebron01_space-other_T2star_softseg.nii.gz => sub-vallHebron01_space-other_T2star_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-vallHebron01/anat/{sub-vallHebron01_space-other_T2w_softseg.json => sub-vallHebron01_space-other_T2w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-vallHebron01/anat/{sub-vallHebron01_space-other_T2w_softseg.nii.gz => sub-vallHebron01_space-other_T2w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-vallHebron01/dwi/{sub-vallHebron01_rec-average_dwi_softseg.json => sub-vallHebron01_rec-average_dwi_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-vallHebron01/dwi/{sub-vallHebron01_rec-average_dwi_softseg.nii.gz => sub-vallHebron01_rec-average_dwi_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-vallHebron02/anat/{sub-vallHebron02_flip-1_mt-on_space-other_MTS_softseg.json => sub-vallHebron02_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-vallHebron02/anat/{sub-vallHebron02_flip-1_mt-on_space-other_MTS_softseg.nii.gz => sub-vallHebron02_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-vallHebron02/anat/{sub-vallHebron02_flip-2_mt-off_space-other_MTS_softseg.json => sub-vallHebron02_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-vallHebron02/anat/{sub-vallHebron02_flip-2_mt-off_space-other_MTS_softseg.nii.gz => sub-vallHebron02_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-vallHebron02/anat/{sub-vallHebron02_space-other_T1w_softseg.json => sub-vallHebron02_space-other_T1w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-vallHebron02/anat/{sub-vallHebron02_space-other_T1w_softseg.nii.gz => sub-vallHebron02_space-other_T1w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-vallHebron02/anat/{sub-vallHebron02_space-other_T2star_softseg.json => sub-vallHebron02_space-other_T2star_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-vallHebron02/anat/{sub-vallHebron02_space-other_T2star_softseg.nii.gz => sub-vallHebron02_space-other_T2star_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-vallHebron02/anat/{sub-vallHebron02_space-other_T2w_softseg.json => sub-vallHebron02_space-other_T2w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-vallHebron02/anat/{sub-vallHebron02_space-other_T2w_softseg.nii.gz => sub-vallHebron02_space-other_T2w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-vallHebron02/dwi/{sub-vallHebron02_rec-average_dwi_softseg.json => sub-vallHebron02_rec-average_dwi_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-vallHebron02/dwi/{sub-vallHebron02_rec-average_dwi_softseg.nii.gz => sub-vallHebron02_rec-average_dwi_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-vallHebron03/anat/{sub-vallHebron03_flip-1_mt-on_space-other_MTS_softseg.json => sub-vallHebron03_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-vallHebron03/anat/{sub-vallHebron03_flip-1_mt-on_space-other_MTS_softseg.nii.gz => sub-vallHebron03_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-vallHebron03/anat/{sub-vallHebron03_flip-2_mt-off_space-other_MTS_softseg.json => sub-vallHebron03_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-vallHebron03/anat/{sub-vallHebron03_flip-2_mt-off_space-other_MTS_softseg.nii.gz => sub-vallHebron03_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-vallHebron03/anat/{sub-vallHebron03_space-other_T1w_softseg.json => sub-vallHebron03_space-other_T1w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-vallHebron03/anat/{sub-vallHebron03_space-other_T1w_softseg.nii.gz => sub-vallHebron03_space-other_T1w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-vallHebron03/anat/{sub-vallHebron03_space-other_T2star_softseg.json => sub-vallHebron03_space-other_T2star_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-vallHebron03/anat/{sub-vallHebron03_space-other_T2star_softseg.nii.gz => sub-vallHebron03_space-other_T2star_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-vallHebron03/anat/{sub-vallHebron03_space-other_T2w_softseg.json => sub-vallHebron03_space-other_T2w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-vallHebron03/anat/{sub-vallHebron03_space-other_T2w_softseg.nii.gz => sub-vallHebron03_space-other_T2w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-vallHebron03/dwi/{sub-vallHebron03_rec-average_dwi_softseg.json => sub-vallHebron03_rec-average_dwi_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-vallHebron03/dwi/{sub-vallHebron03_rec-average_dwi_softseg.nii.gz => sub-vallHebron03_rec-average_dwi_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-vallHebron04/anat/{sub-vallHebron04_flip-1_mt-on_space-other_MTS_softseg.json => sub-vallHebron04_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-vallHebron04/anat/{sub-vallHebron04_flip-1_mt-on_space-other_MTS_softseg.nii.gz => sub-vallHebron04_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-vallHebron04/anat/{sub-vallHebron04_flip-2_mt-off_space-other_MTS_softseg.json => sub-vallHebron04_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-vallHebron04/anat/{sub-vallHebron04_flip-2_mt-off_space-other_MTS_softseg.nii.gz => sub-vallHebron04_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-vallHebron04/anat/{sub-vallHebron04_space-other_T1w_softseg.json => sub-vallHebron04_space-other_T1w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-vallHebron04/anat/{sub-vallHebron04_space-other_T1w_softseg.nii.gz => sub-vallHebron04_space-other_T1w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-vallHebron04/anat/{sub-vallHebron04_space-other_T2star_softseg.json => sub-vallHebron04_space-other_T2star_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-vallHebron04/anat/{sub-vallHebron04_space-other_T2star_softseg.nii.gz => sub-vallHebron04_space-other_T2star_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-vallHebron04/anat/{sub-vallHebron04_space-other_T2w_softseg.json => sub-vallHebron04_space-other_T2w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-vallHebron04/anat/{sub-vallHebron04_space-other_T2w_softseg.nii.gz => sub-vallHebron04_space-other_T2w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-vallHebron04/dwi/{sub-vallHebron04_rec-average_dwi_softseg.json => sub-vallHebron04_rec-average_dwi_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-vallHebron04/dwi/{sub-vallHebron04_rec-average_dwi_softseg.nii.gz => sub-vallHebron04_rec-average_dwi_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-vallHebron05/anat/{sub-vallHebron05_flip-1_mt-on_space-other_MTS_softseg.json => sub-vallHebron05_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-vallHebron05/anat/{sub-vallHebron05_flip-1_mt-on_space-other_MTS_softseg.nii.gz => sub-vallHebron05_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-vallHebron05/anat/{sub-vallHebron05_flip-2_mt-off_space-other_MTS_softseg.json => sub-vallHebron05_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-vallHebron05/anat/{sub-vallHebron05_flip-2_mt-off_space-other_MTS_softseg.nii.gz => sub-vallHebron05_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-vallHebron05/anat/{sub-vallHebron05_space-other_T1w_softseg.json => sub-vallHebron05_space-other_T1w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-vallHebron05/anat/{sub-vallHebron05_space-other_T1w_softseg.nii.gz => sub-vallHebron05_space-other_T1w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-vallHebron05/anat/{sub-vallHebron05_space-other_T2star_softseg.json => sub-vallHebron05_space-other_T2star_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-vallHebron05/anat/{sub-vallHebron05_space-other_T2star_softseg.nii.gz => sub-vallHebron05_space-other_T2star_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-vallHebron05/anat/{sub-vallHebron05_space-other_T2w_softseg.json => sub-vallHebron05_space-other_T2w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-vallHebron05/anat/{sub-vallHebron05_space-other_T2w_softseg.nii.gz => sub-vallHebron05_space-other_T2w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-vallHebron05/dwi/{sub-vallHebron05_rec-average_dwi_softseg.json => sub-vallHebron05_rec-average_dwi_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-vallHebron05/dwi/{sub-vallHebron05_rec-average_dwi_softseg.nii.gz => sub-vallHebron05_rec-average_dwi_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-vallHebron06/anat/{sub-vallHebron06_flip-1_mt-on_space-other_MTS_softseg.json => sub-vallHebron06_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-vallHebron06/anat/{sub-vallHebron06_flip-1_mt-on_space-other_MTS_softseg.nii.gz => sub-vallHebron06_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-vallHebron06/anat/{sub-vallHebron06_flip-2_mt-off_space-other_MTS_softseg.json => sub-vallHebron06_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-vallHebron06/anat/{sub-vallHebron06_flip-2_mt-off_space-other_MTS_softseg.nii.gz => sub-vallHebron06_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-vallHebron06/anat/{sub-vallHebron06_space-other_T1w_softseg.json => sub-vallHebron06_space-other_T1w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-vallHebron06/anat/{sub-vallHebron06_space-other_T1w_softseg.nii.gz => sub-vallHebron06_space-other_T1w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-vallHebron06/anat/{sub-vallHebron06_space-other_T2star_softseg.json => sub-vallHebron06_space-other_T2star_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-vallHebron06/anat/{sub-vallHebron06_space-other_T2star_softseg.nii.gz => sub-vallHebron06_space-other_T2star_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-vallHebron06/anat/{sub-vallHebron06_space-other_T2w_softseg.json => sub-vallHebron06_space-other_T2w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-vallHebron06/anat/{sub-vallHebron06_space-other_T2w_softseg.nii.gz => sub-vallHebron06_space-other_T2w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-vallHebron06/dwi/{sub-vallHebron06_rec-average_dwi_softseg.json => sub-vallHebron06_rec-average_dwi_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-vallHebron06/dwi/{sub-vallHebron06_rec-average_dwi_softseg.nii.gz => sub-vallHebron06_rec-average_dwi_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-vallHebron07/anat/{sub-vallHebron07_flip-1_mt-on_space-other_MTS_softseg.json => sub-vallHebron07_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-vallHebron07/anat/{sub-vallHebron07_flip-1_mt-on_space-other_MTS_softseg.nii.gz => sub-vallHebron07_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-vallHebron07/anat/{sub-vallHebron07_flip-2_mt-off_space-other_MTS_softseg.json => sub-vallHebron07_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-vallHebron07/anat/{sub-vallHebron07_flip-2_mt-off_space-other_MTS_softseg.nii.gz => sub-vallHebron07_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-vallHebron07/anat/{sub-vallHebron07_space-other_T1w_softseg.json => sub-vallHebron07_space-other_T1w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-vallHebron07/anat/{sub-vallHebron07_space-other_T1w_softseg.nii.gz => sub-vallHebron07_space-other_T1w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-vallHebron07/anat/{sub-vallHebron07_space-other_T2star_softseg.json => sub-vallHebron07_space-other_T2star_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-vallHebron07/anat/{sub-vallHebron07_space-other_T2star_softseg.nii.gz => sub-vallHebron07_space-other_T2star_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-vallHebron07/anat/{sub-vallHebron07_space-other_T2w_softseg.json => sub-vallHebron07_space-other_T2w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-vallHebron07/anat/{sub-vallHebron07_space-other_T2w_softseg.nii.gz => sub-vallHebron07_space-other_T2w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-vallHebron07/dwi/{sub-vallHebron07_rec-average_dwi_softseg.json => sub-vallHebron07_rec-average_dwi_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-vallHebron07/dwi/{sub-vallHebron07_rec-average_dwi_softseg.nii.gz => sub-vallHebron07_rec-average_dwi_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-vuiisAchieva01/anat/{sub-vuiisAchieva01_flip-1_mt-on_space-other_MTS_softseg.json => sub-vuiisAchieva01_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-vuiisAchieva01/anat/{sub-vuiisAchieva01_flip-1_mt-on_space-other_MTS_softseg.nii.gz => sub-vuiisAchieva01_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-vuiisAchieva01/anat/{sub-vuiisAchieva01_flip-2_mt-off_space-other_MTS_softseg.json => sub-vuiisAchieva01_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-vuiisAchieva01/anat/{sub-vuiisAchieva01_flip-2_mt-off_space-other_MTS_softseg.nii.gz => sub-vuiisAchieva01_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-vuiisAchieva01/anat/{sub-vuiisAchieva01_space-other_T1w_softseg.json => sub-vuiisAchieva01_space-other_T1w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-vuiisAchieva01/anat/{sub-vuiisAchieva01_space-other_T1w_softseg.nii.gz => sub-vuiisAchieva01_space-other_T1w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-vuiisAchieva01/anat/{sub-vuiisAchieva01_space-other_T2star_softseg.json => sub-vuiisAchieva01_space-other_T2star_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-vuiisAchieva01/anat/{sub-vuiisAchieva01_space-other_T2star_softseg.nii.gz => sub-vuiisAchieva01_space-other_T2star_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-vuiisAchieva01/anat/{sub-vuiisAchieva01_space-other_T2w_softseg.json => sub-vuiisAchieva01_space-other_T2w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-vuiisAchieva01/anat/{sub-vuiisAchieva01_space-other_T2w_softseg.nii.gz => sub-vuiisAchieva01_space-other_T2w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-vuiisAchieva01/dwi/{sub-vuiisAchieva01_rec-average_dwi_softseg.json => sub-vuiisAchieva01_rec-average_dwi_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-vuiisAchieva01/dwi/{sub-vuiisAchieva01_rec-average_dwi_softseg.nii.gz => sub-vuiisAchieva01_rec-average_dwi_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-vuiisAchieva02/anat/{sub-vuiisAchieva02_flip-1_mt-on_space-other_MTS_softseg.json => sub-vuiisAchieva02_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-vuiisAchieva02/anat/{sub-vuiisAchieva02_flip-1_mt-on_space-other_MTS_softseg.nii.gz => sub-vuiisAchieva02_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-vuiisAchieva02/anat/{sub-vuiisAchieva02_flip-2_mt-off_space-other_MTS_softseg.json => sub-vuiisAchieva02_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-vuiisAchieva02/anat/{sub-vuiisAchieva02_flip-2_mt-off_space-other_MTS_softseg.nii.gz => sub-vuiisAchieva02_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-vuiisAchieva02/anat/{sub-vuiisAchieva02_space-other_T1w_softseg.json => sub-vuiisAchieva02_space-other_T1w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-vuiisAchieva02/anat/{sub-vuiisAchieva02_space-other_T1w_softseg.nii.gz => sub-vuiisAchieva02_space-other_T1w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-vuiisAchieva02/anat/{sub-vuiisAchieva02_space-other_T2star_softseg.json => sub-vuiisAchieva02_space-other_T2star_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-vuiisAchieva02/anat/{sub-vuiisAchieva02_space-other_T2star_softseg.nii.gz => sub-vuiisAchieva02_space-other_T2star_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-vuiisAchieva02/anat/{sub-vuiisAchieva02_space-other_T2w_softseg.json => sub-vuiisAchieva02_space-other_T2w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-vuiisAchieva02/anat/{sub-vuiisAchieva02_space-other_T2w_softseg.nii.gz => sub-vuiisAchieva02_space-other_T2w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-vuiisAchieva02/dwi/{sub-vuiisAchieva02_rec-average_dwi_softseg.json => sub-vuiisAchieva02_rec-average_dwi_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-vuiisAchieva02/dwi/{sub-vuiisAchieva02_rec-average_dwi_softseg.nii.gz => sub-vuiisAchieva02_rec-average_dwi_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-vuiisAchieva03/anat/{sub-vuiisAchieva03_flip-1_mt-on_space-other_MTS_softseg.json => sub-vuiisAchieva03_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-vuiisAchieva03/anat/{sub-vuiisAchieva03_flip-1_mt-on_space-other_MTS_softseg.nii.gz => sub-vuiisAchieva03_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-vuiisAchieva03/anat/{sub-vuiisAchieva03_flip-2_mt-off_space-other_MTS_softseg.json => sub-vuiisAchieva03_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-vuiisAchieva03/anat/{sub-vuiisAchieva03_flip-2_mt-off_space-other_MTS_softseg.nii.gz => sub-vuiisAchieva03_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-vuiisAchieva03/anat/{sub-vuiisAchieva03_space-other_T1w_softseg.json => sub-vuiisAchieva03_space-other_T1w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-vuiisAchieva03/anat/{sub-vuiisAchieva03_space-other_T1w_softseg.nii.gz => sub-vuiisAchieva03_space-other_T1w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-vuiisAchieva03/anat/{sub-vuiisAchieva03_space-other_T2star_softseg.json => sub-vuiisAchieva03_space-other_T2star_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-vuiisAchieva03/anat/{sub-vuiisAchieva03_space-other_T2star_softseg.nii.gz => sub-vuiisAchieva03_space-other_T2star_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-vuiisAchieva03/anat/{sub-vuiisAchieva03_space-other_T2w_softseg.json => sub-vuiisAchieva03_space-other_T2w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-vuiisAchieva03/anat/{sub-vuiisAchieva03_space-other_T2w_softseg.nii.gz => sub-vuiisAchieva03_space-other_T2w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-vuiisAchieva03/dwi/{sub-vuiisAchieva03_rec-average_dwi_softseg.json => sub-vuiisAchieva03_rec-average_dwi_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-vuiisAchieva03/dwi/{sub-vuiisAchieva03_rec-average_dwi_softseg.nii.gz => sub-vuiisAchieva03_rec-average_dwi_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-vuiisAchieva04/anat/{sub-vuiisAchieva04_flip-1_mt-on_space-other_MTS_softseg.json => sub-vuiisAchieva04_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-vuiisAchieva04/anat/{sub-vuiisAchieva04_flip-1_mt-on_space-other_MTS_softseg.nii.gz => sub-vuiisAchieva04_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-vuiisAchieva04/anat/{sub-vuiisAchieva04_flip-2_mt-off_space-other_MTS_softseg.json => sub-vuiisAchieva04_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-vuiisAchieva04/anat/{sub-vuiisAchieva04_flip-2_mt-off_space-other_MTS_softseg.nii.gz => sub-vuiisAchieva04_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-vuiisAchieva04/anat/{sub-vuiisAchieva04_space-other_T1w_softseg.json => sub-vuiisAchieva04_space-other_T1w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-vuiisAchieva04/anat/{sub-vuiisAchieva04_space-other_T1w_softseg.nii.gz => sub-vuiisAchieva04_space-other_T1w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-vuiisAchieva04/anat/{sub-vuiisAchieva04_space-other_T2star_softseg.json => sub-vuiisAchieva04_space-other_T2star_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-vuiisAchieva04/anat/{sub-vuiisAchieva04_space-other_T2star_softseg.nii.gz => sub-vuiisAchieva04_space-other_T2star_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-vuiisAchieva04/anat/{sub-vuiisAchieva04_space-other_T2w_softseg.json => sub-vuiisAchieva04_space-other_T2w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-vuiisAchieva04/anat/{sub-vuiisAchieva04_space-other_T2w_softseg.nii.gz => sub-vuiisAchieva04_space-other_T2w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-vuiisAchieva04/dwi/{sub-vuiisAchieva04_rec-average_dwi_softseg.json => sub-vuiisAchieva04_rec-average_dwi_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-vuiisAchieva04/dwi/{sub-vuiisAchieva04_rec-average_dwi_softseg.nii.gz => sub-vuiisAchieva04_rec-average_dwi_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-vuiisAchieva05/anat/{sub-vuiisAchieva05_flip-1_mt-on_space-other_MTS_softseg.json => sub-vuiisAchieva05_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-vuiisAchieva05/anat/{sub-vuiisAchieva05_flip-1_mt-on_space-other_MTS_softseg.nii.gz => sub-vuiisAchieva05_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-vuiisAchieva05/anat/{sub-vuiisAchieva05_flip-2_mt-off_space-other_MTS_softseg.json => sub-vuiisAchieva05_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-vuiisAchieva05/anat/{sub-vuiisAchieva05_flip-2_mt-off_space-other_MTS_softseg.nii.gz => sub-vuiisAchieva05_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-vuiisAchieva05/anat/{sub-vuiisAchieva05_space-other_T1w_softseg.json => sub-vuiisAchieva05_space-other_T1w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-vuiisAchieva05/anat/{sub-vuiisAchieva05_space-other_T1w_softseg.nii.gz => sub-vuiisAchieva05_space-other_T1w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-vuiisAchieva05/anat/{sub-vuiisAchieva05_space-other_T2star_softseg.json => sub-vuiisAchieva05_space-other_T2star_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-vuiisAchieva05/anat/{sub-vuiisAchieva05_space-other_T2star_softseg.nii.gz => sub-vuiisAchieva05_space-other_T2star_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-vuiisAchieva05/anat/{sub-vuiisAchieva05_space-other_T2w_softseg.json => sub-vuiisAchieva05_space-other_T2w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-vuiisAchieva05/anat/{sub-vuiisAchieva05_space-other_T2w_softseg.nii.gz => sub-vuiisAchieva05_space-other_T2w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-vuiisAchieva05/dwi/{sub-vuiisAchieva05_rec-average_dwi_softseg.json => sub-vuiisAchieva05_rec-average_dwi_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-vuiisAchieva05/dwi/{sub-vuiisAchieva05_rec-average_dwi_softseg.nii.gz => sub-vuiisAchieva05_rec-average_dwi_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-vuiisAchieva06/anat/{sub-vuiisAchieva06_flip-1_mt-on_space-other_MTS_softseg.json => sub-vuiisAchieva06_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-vuiisAchieva06/anat/{sub-vuiisAchieva06_flip-1_mt-on_space-other_MTS_softseg.nii.gz => sub-vuiisAchieva06_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-vuiisAchieva06/anat/{sub-vuiisAchieva06_flip-2_mt-off_space-other_MTS_softseg.json => sub-vuiisAchieva06_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-vuiisAchieva06/anat/{sub-vuiisAchieva06_flip-2_mt-off_space-other_MTS_softseg.nii.gz => sub-vuiisAchieva06_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-vuiisAchieva06/anat/{sub-vuiisAchieva06_space-other_T1w_softseg.json => sub-vuiisAchieva06_space-other_T1w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-vuiisAchieva06/anat/{sub-vuiisAchieva06_space-other_T1w_softseg.nii.gz => sub-vuiisAchieva06_space-other_T1w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-vuiisAchieva06/anat/{sub-vuiisAchieva06_space-other_T2star_softseg.json => sub-vuiisAchieva06_space-other_T2star_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-vuiisAchieva06/anat/{sub-vuiisAchieva06_space-other_T2star_softseg.nii.gz => sub-vuiisAchieva06_space-other_T2star_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-vuiisAchieva06/anat/{sub-vuiisAchieva06_space-other_T2w_softseg.json => sub-vuiisAchieva06_space-other_T2w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-vuiisAchieva06/anat/{sub-vuiisAchieva06_space-other_T2w_softseg.nii.gz => sub-vuiisAchieva06_space-other_T2w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-vuiisAchieva06/dwi/{sub-vuiisAchieva06_rec-average_dwi_softseg.json => sub-vuiisAchieva06_rec-average_dwi_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-vuiisAchieva06/dwi/{sub-vuiisAchieva06_rec-average_dwi_softseg.nii.gz => sub-vuiisAchieva06_rec-average_dwi_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-vuiisIngenia01/anat/{sub-vuiisIngenia01_flip-1_mt-on_space-other_MTS_softseg.json => sub-vuiisIngenia01_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-vuiisIngenia01/anat/{sub-vuiisIngenia01_flip-1_mt-on_space-other_MTS_softseg.nii.gz => sub-vuiisIngenia01_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-vuiisIngenia01/anat/{sub-vuiisIngenia01_flip-2_mt-off_space-other_MTS_softseg.json => sub-vuiisIngenia01_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-vuiisIngenia01/anat/{sub-vuiisIngenia01_flip-2_mt-off_space-other_MTS_softseg.nii.gz => sub-vuiisIngenia01_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-vuiisIngenia01/anat/{sub-vuiisIngenia01_space-other_T1w_softseg.json => sub-vuiisIngenia01_space-other_T1w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-vuiisIngenia01/anat/{sub-vuiisIngenia01_space-other_T1w_softseg.nii.gz => sub-vuiisIngenia01_space-other_T1w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-vuiisIngenia01/anat/{sub-vuiisIngenia01_space-other_T2star_softseg.json => sub-vuiisIngenia01_space-other_T2star_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-vuiisIngenia01/anat/{sub-vuiisIngenia01_space-other_T2star_softseg.nii.gz => sub-vuiisIngenia01_space-other_T2star_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-vuiisIngenia01/anat/{sub-vuiisIngenia01_space-other_T2w_softseg.json => sub-vuiisIngenia01_space-other_T2w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-vuiisIngenia01/anat/{sub-vuiisIngenia01_space-other_T2w_softseg.nii.gz => sub-vuiisIngenia01_space-other_T2w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-vuiisIngenia01/dwi/{sub-vuiisIngenia01_rec-average_dwi_softseg.json => sub-vuiisIngenia01_rec-average_dwi_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-vuiisIngenia01/dwi/{sub-vuiisIngenia01_rec-average_dwi_softseg.nii.gz => sub-vuiisIngenia01_rec-average_dwi_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-vuiisIngenia02/anat/{sub-vuiisIngenia02_flip-1_mt-on_space-other_MTS_softseg.json => sub-vuiisIngenia02_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-vuiisIngenia02/anat/{sub-vuiisIngenia02_flip-1_mt-on_space-other_MTS_softseg.nii.gz => sub-vuiisIngenia02_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-vuiisIngenia02/anat/{sub-vuiisIngenia02_flip-2_mt-off_space-other_MTS_softseg.json => sub-vuiisIngenia02_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-vuiisIngenia02/anat/{sub-vuiisIngenia02_flip-2_mt-off_space-other_MTS_softseg.nii.gz => sub-vuiisIngenia02_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-vuiisIngenia02/anat/{sub-vuiisIngenia02_space-other_T1w_softseg.json => sub-vuiisIngenia02_space-other_T1w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-vuiisIngenia02/anat/{sub-vuiisIngenia02_space-other_T1w_softseg.nii.gz => sub-vuiisIngenia02_space-other_T1w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-vuiisIngenia02/anat/{sub-vuiisIngenia02_space-other_T2star_softseg.json => sub-vuiisIngenia02_space-other_T2star_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-vuiisIngenia02/anat/{sub-vuiisIngenia02_space-other_T2star_softseg.nii.gz => sub-vuiisIngenia02_space-other_T2star_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-vuiisIngenia02/anat/{sub-vuiisIngenia02_space-other_T2w_softseg.json => sub-vuiisIngenia02_space-other_T2w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-vuiisIngenia02/anat/{sub-vuiisIngenia02_space-other_T2w_softseg.nii.gz => sub-vuiisIngenia02_space-other_T2w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-vuiisIngenia02/dwi/{sub-vuiisIngenia02_rec-average_dwi_softseg.json => sub-vuiisIngenia02_rec-average_dwi_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-vuiisIngenia02/dwi/{sub-vuiisIngenia02_rec-average_dwi_softseg.nii.gz => sub-vuiisIngenia02_rec-average_dwi_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-vuiisIngenia03/anat/{sub-vuiisIngenia03_flip-1_mt-on_space-other_MTS_softseg.json => sub-vuiisIngenia03_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-vuiisIngenia03/anat/{sub-vuiisIngenia03_flip-1_mt-on_space-other_MTS_softseg.nii.gz => sub-vuiisIngenia03_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-vuiisIngenia03/anat/{sub-vuiisIngenia03_flip-2_mt-off_space-other_MTS_softseg.json => sub-vuiisIngenia03_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-vuiisIngenia03/anat/{sub-vuiisIngenia03_flip-2_mt-off_space-other_MTS_softseg.nii.gz => sub-vuiisIngenia03_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-vuiisIngenia03/anat/{sub-vuiisIngenia03_space-other_T1w_softseg.json => sub-vuiisIngenia03_space-other_T1w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-vuiisIngenia03/anat/{sub-vuiisIngenia03_space-other_T1w_softseg.nii.gz => sub-vuiisIngenia03_space-other_T1w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-vuiisIngenia03/anat/{sub-vuiisIngenia03_space-other_T2star_softseg.json => sub-vuiisIngenia03_space-other_T2star_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-vuiisIngenia03/anat/{sub-vuiisIngenia03_space-other_T2star_softseg.nii.gz => sub-vuiisIngenia03_space-other_T2star_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-vuiisIngenia03/anat/{sub-vuiisIngenia03_space-other_T2w_softseg.json => sub-vuiisIngenia03_space-other_T2w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-vuiisIngenia03/anat/{sub-vuiisIngenia03_space-other_T2w_softseg.nii.gz => sub-vuiisIngenia03_space-other_T2w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-vuiisIngenia03/dwi/{sub-vuiisIngenia03_rec-average_dwi_softseg.json => sub-vuiisIngenia03_rec-average_dwi_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-vuiisIngenia03/dwi/{sub-vuiisIngenia03_rec-average_dwi_softseg.nii.gz => sub-vuiisIngenia03_rec-average_dwi_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-vuiisIngenia04/anat/{sub-vuiisIngenia04_flip-1_mt-on_space-other_MTS_softseg.json => sub-vuiisIngenia04_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-vuiisIngenia04/anat/{sub-vuiisIngenia04_flip-1_mt-on_space-other_MTS_softseg.nii.gz => sub-vuiisIngenia04_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-vuiisIngenia04/anat/{sub-vuiisIngenia04_flip-2_mt-off_space-other_MTS_softseg.json => sub-vuiisIngenia04_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-vuiisIngenia04/anat/{sub-vuiisIngenia04_flip-2_mt-off_space-other_MTS_softseg.nii.gz => sub-vuiisIngenia04_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-vuiisIngenia04/anat/{sub-vuiisIngenia04_space-other_T1w_softseg.json => sub-vuiisIngenia04_space-other_T1w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-vuiisIngenia04/anat/{sub-vuiisIngenia04_space-other_T1w_softseg.nii.gz => sub-vuiisIngenia04_space-other_T1w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-vuiisIngenia04/anat/{sub-vuiisIngenia04_space-other_T2star_softseg.json => sub-vuiisIngenia04_space-other_T2star_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-vuiisIngenia04/anat/{sub-vuiisIngenia04_space-other_T2star_softseg.nii.gz => sub-vuiisIngenia04_space-other_T2star_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-vuiisIngenia04/anat/{sub-vuiisIngenia04_space-other_T2w_softseg.json => sub-vuiisIngenia04_space-other_T2w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-vuiisIngenia04/anat/{sub-vuiisIngenia04_space-other_T2w_softseg.nii.gz => sub-vuiisIngenia04_space-other_T2w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-vuiisIngenia04/dwi/{sub-vuiisIngenia04_rec-average_dwi_softseg.json => sub-vuiisIngenia04_rec-average_dwi_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-vuiisIngenia04/dwi/{sub-vuiisIngenia04_rec-average_dwi_softseg.nii.gz => sub-vuiisIngenia04_rec-average_dwi_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-vuiisIngenia05/anat/{sub-vuiisIngenia05_flip-1_mt-on_space-other_MTS_softseg.json => sub-vuiisIngenia05_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-vuiisIngenia05/anat/{sub-vuiisIngenia05_flip-1_mt-on_space-other_MTS_softseg.nii.gz => sub-vuiisIngenia05_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-vuiisIngenia05/anat/{sub-vuiisIngenia05_flip-2_mt-off_space-other_MTS_softseg.json => sub-vuiisIngenia05_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-vuiisIngenia05/anat/{sub-vuiisIngenia05_flip-2_mt-off_space-other_MTS_softseg.nii.gz => sub-vuiisIngenia05_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-vuiisIngenia05/anat/{sub-vuiisIngenia05_space-other_T1w_softseg.json => sub-vuiisIngenia05_space-other_T1w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-vuiisIngenia05/anat/{sub-vuiisIngenia05_space-other_T1w_softseg.nii.gz => sub-vuiisIngenia05_space-other_T1w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-vuiisIngenia05/anat/{sub-vuiisIngenia05_space-other_T2star_softseg.json => sub-vuiisIngenia05_space-other_T2star_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-vuiisIngenia05/anat/{sub-vuiisIngenia05_space-other_T2star_softseg.nii.gz => sub-vuiisIngenia05_space-other_T2star_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-vuiisIngenia05/anat/{sub-vuiisIngenia05_space-other_T2w_softseg.json => sub-vuiisIngenia05_space-other_T2w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-vuiisIngenia05/anat/{sub-vuiisIngenia05_space-other_T2w_softseg.nii.gz => sub-vuiisIngenia05_space-other_T2w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-vuiisIngenia05/dwi/{sub-vuiisIngenia05_rec-average_dwi_softseg.json => sub-vuiisIngenia05_rec-average_dwi_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-vuiisIngenia05/dwi/{sub-vuiisIngenia05_rec-average_dwi_softseg.nii.gz => sub-vuiisIngenia05_rec-average_dwi_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-vuiisIngenia06/anat/{sub-vuiisIngenia06_flip-1_mt-on_space-other_MTS_softseg.json => sub-vuiisIngenia06_flip-1_mt-on_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-vuiisIngenia06/anat/{sub-vuiisIngenia06_flip-1_mt-on_space-other_MTS_softseg.nii.gz => sub-vuiisIngenia06_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-vuiisIngenia06/anat/{sub-vuiisIngenia06_flip-2_mt-off_space-other_MTS_softseg.json => sub-vuiisIngenia06_flip-2_mt-off_space-other_MTS_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-vuiisIngenia06/anat/{sub-vuiisIngenia06_flip-2_mt-off_space-other_MTS_softseg.nii.gz => sub-vuiisIngenia06_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-vuiisIngenia06/anat/{sub-vuiisIngenia06_space-other_T1w_softseg.json => sub-vuiisIngenia06_space-other_T1w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-vuiisIngenia06/anat/{sub-vuiisIngenia06_space-other_T1w_softseg.nii.gz => sub-vuiisIngenia06_space-other_T1w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-vuiisIngenia06/anat/{sub-vuiisIngenia06_space-other_T2star_softseg.json => sub-vuiisIngenia06_space-other_T2star_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-vuiisIngenia06/anat/{sub-vuiisIngenia06_space-other_T2star_softseg.nii.gz => sub-vuiisIngenia06_space-other_T2star_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-vuiisIngenia06/anat/{sub-vuiisIngenia06_space-other_T2w_softseg.json => sub-vuiisIngenia06_space-other_T2w_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-vuiisIngenia06/anat/{sub-vuiisIngenia06_space-other_T2w_softseg.nii.gz => sub-vuiisIngenia06_space-other_T2w_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg/sub-vuiisIngenia06/dwi/{sub-vuiisIngenia06_rec-average_dwi_softseg.json => sub-vuiisIngenia06_rec-average_dwi_label-SC_softseg.json} (100%) rename derivatives/labels_softseg/sub-vuiisIngenia06/dwi/{sub-vuiisIngenia06_rec-average_dwi_softseg.nii.gz => sub-vuiisIngenia06_rec-average_dwi_label-SC_softseg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-amu01/anat/{sub-amu01_flip-1_mt-on_space-other_MTS_softseg_bin.json => sub-amu01_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-amu01/anat/{sub-amu01_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz => sub-amu01_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-amu01/anat/{sub-amu01_flip-2_mt-off_space-other_MTS_softseg_bin.json => sub-amu01_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-amu01/anat/{sub-amu01_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz => sub-amu01_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-amu01/anat/{sub-amu01_space-other_T1w_softseg_bin.json => sub-amu01_space-other_T1w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-amu01/anat/{sub-amu01_space-other_T1w_softseg_bin.nii.gz => sub-amu01_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-amu01/anat/{sub-amu01_space-other_T2star_softseg_bin.json => sub-amu01_space-other_T2star_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-amu01/anat/{sub-amu01_space-other_T2star_softseg_bin.nii.gz => sub-amu01_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-amu01/anat/{sub-amu01_space-other_T2w_softseg_bin.json => sub-amu01_space-other_T2w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-amu01/anat/{sub-amu01_space-other_T2w_softseg_bin.nii.gz => sub-amu01_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-amu01/dwi/{sub-amu01_rec-average_dwi_softseg_bin.json => sub-amu01_rec-average_dwi_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-amu01/dwi/{sub-amu01_rec-average_dwi_softseg_bin.nii.gz => sub-amu01_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-amu02/anat/{sub-amu02_flip-1_mt-on_space-other_MTS_softseg_bin.json => sub-amu02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-amu02/anat/{sub-amu02_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz => sub-amu02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-amu02/anat/{sub-amu02_flip-2_mt-off_space-other_MTS_softseg_bin.json => sub-amu02_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-amu02/anat/{sub-amu02_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz => sub-amu02_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-amu02/anat/{sub-amu02_space-other_T1w_softseg_bin.json => sub-amu02_space-other_T1w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-amu02/anat/{sub-amu02_space-other_T1w_softseg_bin.nii.gz => sub-amu02_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-amu02/anat/{sub-amu02_space-other_T2star_softseg_bin.json => sub-amu02_space-other_T2star_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-amu02/anat/{sub-amu02_space-other_T2star_softseg_bin.nii.gz => sub-amu02_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-amu02/anat/{sub-amu02_space-other_T2w_softseg_bin.json => sub-amu02_space-other_T2w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-amu02/anat/{sub-amu02_space-other_T2w_softseg_bin.nii.gz => sub-amu02_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-amu02/dwi/{sub-amu02_rec-average_dwi_softseg_bin.json => sub-amu02_rec-average_dwi_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-amu02/dwi/{sub-amu02_rec-average_dwi_softseg_bin.nii.gz => sub-amu02_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-amu03/anat/{sub-amu03_flip-1_mt-on_space-other_MTS_softseg_bin.json => sub-amu03_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-amu03/anat/{sub-amu03_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz => sub-amu03_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-amu03/anat/{sub-amu03_flip-2_mt-off_space-other_MTS_softseg_bin.json => sub-amu03_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-amu03/anat/{sub-amu03_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz => sub-amu03_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-amu03/anat/{sub-amu03_space-other_T1w_softseg_bin.json => sub-amu03_space-other_T1w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-amu03/anat/{sub-amu03_space-other_T1w_softseg_bin.nii.gz => sub-amu03_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-amu03/anat/{sub-amu03_space-other_T2star_softseg_bin.json => sub-amu03_space-other_T2star_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-amu03/anat/{sub-amu03_space-other_T2star_softseg_bin.nii.gz => sub-amu03_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-amu03/anat/{sub-amu03_space-other_T2w_softseg_bin.json => sub-amu03_space-other_T2w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-amu03/anat/{sub-amu03_space-other_T2w_softseg_bin.nii.gz => sub-amu03_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-amu03/dwi/{sub-amu03_rec-average_dwi_softseg_bin.json => sub-amu03_rec-average_dwi_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-amu03/dwi/{sub-amu03_rec-average_dwi_softseg_bin.nii.gz => sub-amu03_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-amu04/anat/{sub-amu04_flip-1_mt-on_space-other_MTS_softseg_bin.json => sub-amu04_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-amu04/anat/{sub-amu04_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz => sub-amu04_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-amu04/anat/{sub-amu04_flip-2_mt-off_space-other_MTS_softseg_bin.json => sub-amu04_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-amu04/anat/{sub-amu04_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz => sub-amu04_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-amu04/anat/{sub-amu04_space-other_T1w_softseg_bin.json => sub-amu04_space-other_T1w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-amu04/anat/{sub-amu04_space-other_T1w_softseg_bin.nii.gz => sub-amu04_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-amu04/anat/{sub-amu04_space-other_T2star_softseg_bin.json => sub-amu04_space-other_T2star_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-amu04/anat/{sub-amu04_space-other_T2star_softseg_bin.nii.gz => sub-amu04_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-amu04/anat/{sub-amu04_space-other_T2w_softseg_bin.json => sub-amu04_space-other_T2w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-amu04/anat/{sub-amu04_space-other_T2w_softseg_bin.nii.gz => sub-amu04_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-amu04/dwi/{sub-amu04_rec-average_dwi_softseg_bin.json => sub-amu04_rec-average_dwi_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-amu04/dwi/{sub-amu04_rec-average_dwi_softseg_bin.nii.gz => sub-amu04_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-amu05/anat/{sub-amu05_flip-1_mt-on_space-other_MTS_softseg_bin.json => sub-amu05_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-amu05/anat/{sub-amu05_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz => sub-amu05_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-amu05/anat/{sub-amu05_flip-2_mt-off_space-other_MTS_softseg_bin.json => sub-amu05_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-amu05/anat/{sub-amu05_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz => sub-amu05_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-amu05/anat/{sub-amu05_space-other_T1w_softseg_bin.json => sub-amu05_space-other_T1w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-amu05/anat/{sub-amu05_space-other_T1w_softseg_bin.nii.gz => sub-amu05_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-amu05/anat/{sub-amu05_space-other_T2star_softseg_bin.json => sub-amu05_space-other_T2star_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-amu05/anat/{sub-amu05_space-other_T2star_softseg_bin.nii.gz => sub-amu05_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-amu05/anat/{sub-amu05_space-other_T2w_softseg_bin.json => sub-amu05_space-other_T2w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-amu05/anat/{sub-amu05_space-other_T2w_softseg_bin.nii.gz => sub-amu05_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-amu05/dwi/{sub-amu05_rec-average_dwi_softseg_bin.json => sub-amu05_rec-average_dwi_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-amu05/dwi/{sub-amu05_rec-average_dwi_softseg_bin.nii.gz => sub-amu05_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-balgrist01/anat/{sub-balgrist01_flip-1_mt-on_space-other_MTS_softseg_bin.json => sub-balgrist01_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-balgrist01/anat/{sub-balgrist01_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz => sub-balgrist01_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-balgrist01/anat/{sub-balgrist01_flip-2_mt-off_space-other_MTS_softseg_bin.json => sub-balgrist01_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-balgrist01/anat/{sub-balgrist01_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz => sub-balgrist01_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-balgrist01/anat/{sub-balgrist01_space-other_T1w_softseg_bin.json => sub-balgrist01_space-other_T1w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-balgrist01/anat/{sub-balgrist01_space-other_T1w_softseg_bin.nii.gz => sub-balgrist01_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-balgrist01/anat/{sub-balgrist01_space-other_T2star_softseg_bin.json => sub-balgrist01_space-other_T2star_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-balgrist01/anat/{sub-balgrist01_space-other_T2star_softseg_bin.nii.gz => sub-balgrist01_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-balgrist01/anat/{sub-balgrist01_space-other_T2w_softseg_bin.json => sub-balgrist01_space-other_T2w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-balgrist01/anat/{sub-balgrist01_space-other_T2w_softseg_bin.nii.gz => sub-balgrist01_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-balgrist01/dwi/{sub-balgrist01_rec-average_dwi_softseg_bin.json => sub-balgrist01_rec-average_dwi_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-balgrist01/dwi/{sub-balgrist01_rec-average_dwi_softseg_bin.nii.gz => sub-balgrist01_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-balgrist02/anat/{sub-balgrist02_flip-1_mt-on_space-other_MTS_softseg_bin.json => sub-balgrist02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-balgrist02/anat/{sub-balgrist02_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz => sub-balgrist02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-balgrist02/anat/{sub-balgrist02_flip-2_mt-off_space-other_MTS_softseg_bin.json => sub-balgrist02_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-balgrist02/anat/{sub-balgrist02_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz => sub-balgrist02_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-balgrist02/anat/{sub-balgrist02_space-other_T1w_softseg_bin.json => sub-balgrist02_space-other_T1w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-balgrist02/anat/{sub-balgrist02_space-other_T1w_softseg_bin.nii.gz => sub-balgrist02_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-balgrist02/anat/{sub-balgrist02_space-other_T2star_softseg_bin.json => sub-balgrist02_space-other_T2star_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-balgrist02/anat/{sub-balgrist02_space-other_T2star_softseg_bin.nii.gz => sub-balgrist02_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-balgrist02/anat/{sub-balgrist02_space-other_T2w_softseg_bin.json => sub-balgrist02_space-other_T2w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-balgrist02/anat/{sub-balgrist02_space-other_T2w_softseg_bin.nii.gz => sub-balgrist02_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-balgrist02/dwi/{sub-balgrist02_rec-average_dwi_softseg_bin.json => sub-balgrist02_rec-average_dwi_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-balgrist02/dwi/{sub-balgrist02_rec-average_dwi_softseg_bin.nii.gz => sub-balgrist02_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-balgrist03/anat/{sub-balgrist03_flip-1_mt-on_space-other_MTS_softseg_bin.json => sub-balgrist03_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-balgrist03/anat/{sub-balgrist03_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz => sub-balgrist03_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-balgrist03/anat/{sub-balgrist03_flip-2_mt-off_space-other_MTS_softseg_bin.json => sub-balgrist03_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-balgrist03/anat/{sub-balgrist03_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz => sub-balgrist03_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-balgrist03/anat/{sub-balgrist03_space-other_T1w_softseg_bin.json => sub-balgrist03_space-other_T1w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-balgrist03/anat/{sub-balgrist03_space-other_T1w_softseg_bin.nii.gz => sub-balgrist03_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-balgrist03/anat/{sub-balgrist03_space-other_T2star_softseg_bin.json => sub-balgrist03_space-other_T2star_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-balgrist03/anat/{sub-balgrist03_space-other_T2star_softseg_bin.nii.gz => sub-balgrist03_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-balgrist03/anat/{sub-balgrist03_space-other_T2w_softseg_bin.json => sub-balgrist03_space-other_T2w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-balgrist03/anat/{sub-balgrist03_space-other_T2w_softseg_bin.nii.gz => sub-balgrist03_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-balgrist03/dwi/{sub-balgrist03_rec-average_dwi_softseg_bin.json => sub-balgrist03_rec-average_dwi_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-balgrist03/dwi/{sub-balgrist03_rec-average_dwi_softseg_bin.nii.gz => sub-balgrist03_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-balgrist04/anat/{sub-balgrist04_flip-1_mt-on_space-other_MTS_softseg_bin.json => sub-balgrist04_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-balgrist04/anat/{sub-balgrist04_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz => sub-balgrist04_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-balgrist04/anat/{sub-balgrist04_flip-2_mt-off_space-other_MTS_softseg_bin.json => sub-balgrist04_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-balgrist04/anat/{sub-balgrist04_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz => sub-balgrist04_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-balgrist04/anat/{sub-balgrist04_space-other_T1w_softseg_bin.json => sub-balgrist04_space-other_T1w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-balgrist04/anat/{sub-balgrist04_space-other_T1w_softseg_bin.nii.gz => sub-balgrist04_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-balgrist04/anat/{sub-balgrist04_space-other_T2star_softseg_bin.json => sub-balgrist04_space-other_T2star_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-balgrist04/anat/{sub-balgrist04_space-other_T2star_softseg_bin.nii.gz => sub-balgrist04_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-balgrist04/anat/{sub-balgrist04_space-other_T2w_softseg_bin.json => sub-balgrist04_space-other_T2w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-balgrist04/anat/{sub-balgrist04_space-other_T2w_softseg_bin.nii.gz => sub-balgrist04_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-balgrist04/dwi/{sub-balgrist04_rec-average_dwi_softseg_bin.json => sub-balgrist04_rec-average_dwi_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-balgrist04/dwi/{sub-balgrist04_rec-average_dwi_softseg_bin.nii.gz => sub-balgrist04_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-balgrist05/anat/{sub-balgrist05_flip-1_mt-on_space-other_MTS_softseg_bin.json => sub-balgrist05_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-balgrist05/anat/{sub-balgrist05_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz => sub-balgrist05_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-balgrist05/anat/{sub-balgrist05_flip-2_mt-off_space-other_MTS_softseg_bin.json => sub-balgrist05_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-balgrist05/anat/{sub-balgrist05_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz => sub-balgrist05_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-balgrist05/anat/{sub-balgrist05_space-other_T1w_softseg_bin.json => sub-balgrist05_space-other_T1w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-balgrist05/anat/{sub-balgrist05_space-other_T1w_softseg_bin.nii.gz => sub-balgrist05_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-balgrist05/anat/{sub-balgrist05_space-other_T2star_softseg_bin.json => sub-balgrist05_space-other_T2star_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-balgrist05/anat/{sub-balgrist05_space-other_T2star_softseg_bin.nii.gz => sub-balgrist05_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-balgrist05/anat/{sub-balgrist05_space-other_T2w_softseg_bin.json => sub-balgrist05_space-other_T2w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-balgrist05/anat/{sub-balgrist05_space-other_T2w_softseg_bin.nii.gz => sub-balgrist05_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-balgrist05/dwi/{sub-balgrist05_rec-average_dwi_softseg_bin.json => sub-balgrist05_rec-average_dwi_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-balgrist05/dwi/{sub-balgrist05_rec-average_dwi_softseg_bin.nii.gz => sub-balgrist05_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-balgrist06/anat/{sub-balgrist06_flip-1_mt-on_space-other_MTS_softseg_bin.json => sub-balgrist06_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-balgrist06/anat/{sub-balgrist06_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz => sub-balgrist06_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-balgrist06/anat/{sub-balgrist06_flip-2_mt-off_space-other_MTS_softseg_bin.json => sub-balgrist06_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-balgrist06/anat/{sub-balgrist06_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz => sub-balgrist06_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-balgrist06/anat/{sub-balgrist06_space-other_T1w_softseg_bin.json => sub-balgrist06_space-other_T1w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-balgrist06/anat/{sub-balgrist06_space-other_T1w_softseg_bin.nii.gz => sub-balgrist06_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-balgrist06/anat/{sub-balgrist06_space-other_T2star_softseg_bin.json => sub-balgrist06_space-other_T2star_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-balgrist06/anat/{sub-balgrist06_space-other_T2star_softseg_bin.nii.gz => sub-balgrist06_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-balgrist06/anat/{sub-balgrist06_space-other_T2w_softseg_bin.json => sub-balgrist06_space-other_T2w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-balgrist06/anat/{sub-balgrist06_space-other_T2w_softseg_bin.nii.gz => sub-balgrist06_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-balgrist06/dwi/{sub-balgrist06_rec-average_dwi_softseg_bin.json => sub-balgrist06_rec-average_dwi_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-balgrist06/dwi/{sub-balgrist06_rec-average_dwi_softseg_bin.nii.gz => sub-balgrist06_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-barcelona01/anat/{sub-barcelona01_flip-1_mt-on_space-other_MTS_softseg_bin.json => sub-barcelona01_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-barcelona01/anat/{sub-barcelona01_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz => sub-barcelona01_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-barcelona01/anat/{sub-barcelona01_flip-2_mt-off_space-other_MTS_softseg_bin.json => sub-barcelona01_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-barcelona01/anat/{sub-barcelona01_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz => sub-barcelona01_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-barcelona01/anat/{sub-barcelona01_space-other_T1w_softseg_bin.json => sub-barcelona01_space-other_T1w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-barcelona01/anat/{sub-barcelona01_space-other_T1w_softseg_bin.nii.gz => sub-barcelona01_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-barcelona01/anat/{sub-barcelona01_space-other_T2star_softseg_bin.json => sub-barcelona01_space-other_T2star_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-barcelona01/anat/{sub-barcelona01_space-other_T2star_softseg_bin.nii.gz => sub-barcelona01_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-barcelona01/anat/{sub-barcelona01_space-other_T2w_softseg_bin.json => sub-barcelona01_space-other_T2w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-barcelona01/anat/{sub-barcelona01_space-other_T2w_softseg_bin.nii.gz => sub-barcelona01_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-barcelona01/dwi/{sub-barcelona01_rec-average_dwi_softseg_bin.json => sub-barcelona01_rec-average_dwi_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-barcelona01/dwi/{sub-barcelona01_rec-average_dwi_softseg_bin.nii.gz => sub-barcelona01_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-barcelona02/anat/{sub-barcelona02_flip-1_mt-on_space-other_MTS_softseg_bin.json => sub-barcelona02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-barcelona02/anat/{sub-barcelona02_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz => sub-barcelona02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-barcelona02/anat/{sub-barcelona02_flip-2_mt-off_space-other_MTS_softseg_bin.json => sub-barcelona02_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-barcelona02/anat/{sub-barcelona02_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz => sub-barcelona02_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-barcelona02/anat/{sub-barcelona02_space-other_T1w_softseg_bin.json => sub-barcelona02_space-other_T1w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-barcelona02/anat/{sub-barcelona02_space-other_T1w_softseg_bin.nii.gz => sub-barcelona02_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-barcelona02/anat/{sub-barcelona02_space-other_T2star_softseg_bin.json => sub-barcelona02_space-other_T2star_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-barcelona02/anat/{sub-barcelona02_space-other_T2star_softseg_bin.nii.gz => sub-barcelona02_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-barcelona02/anat/{sub-barcelona02_space-other_T2w_softseg_bin.json => sub-barcelona02_space-other_T2w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-barcelona02/anat/{sub-barcelona02_space-other_T2w_softseg_bin.nii.gz => sub-barcelona02_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-barcelona02/dwi/{sub-barcelona02_rec-average_dwi_softseg_bin.json => sub-barcelona02_rec-average_dwi_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-barcelona02/dwi/{sub-barcelona02_rec-average_dwi_softseg_bin.nii.gz => sub-barcelona02_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-barcelona03/anat/{sub-barcelona03_flip-1_mt-on_space-other_MTS_softseg_bin.json => sub-barcelona03_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-barcelona03/anat/{sub-barcelona03_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz => sub-barcelona03_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-barcelona03/anat/{sub-barcelona03_flip-2_mt-off_space-other_MTS_softseg_bin.json => sub-barcelona03_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-barcelona03/anat/{sub-barcelona03_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz => sub-barcelona03_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-barcelona03/anat/{sub-barcelona03_space-other_T1w_softseg_bin.json => sub-barcelona03_space-other_T1w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-barcelona03/anat/{sub-barcelona03_space-other_T1w_softseg_bin.nii.gz => sub-barcelona03_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-barcelona03/anat/{sub-barcelona03_space-other_T2star_softseg_bin.json => sub-barcelona03_space-other_T2star_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-barcelona03/anat/{sub-barcelona03_space-other_T2star_softseg_bin.nii.gz => sub-barcelona03_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-barcelona03/anat/{sub-barcelona03_space-other_T2w_softseg_bin.json => sub-barcelona03_space-other_T2w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-barcelona03/anat/{sub-barcelona03_space-other_T2w_softseg_bin.nii.gz => sub-barcelona03_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-barcelona03/dwi/{sub-barcelona03_rec-average_dwi_softseg_bin.json => sub-barcelona03_rec-average_dwi_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-barcelona03/dwi/{sub-barcelona03_rec-average_dwi_softseg_bin.nii.gz => sub-barcelona03_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-barcelona04/anat/{sub-barcelona04_flip-1_mt-on_space-other_MTS_softseg_bin.json => sub-barcelona04_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-barcelona04/anat/{sub-barcelona04_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz => sub-barcelona04_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-barcelona04/anat/{sub-barcelona04_flip-2_mt-off_space-other_MTS_softseg_bin.json => sub-barcelona04_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-barcelona04/anat/{sub-barcelona04_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz => sub-barcelona04_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-barcelona04/anat/{sub-barcelona04_space-other_T1w_softseg_bin.json => sub-barcelona04_space-other_T1w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-barcelona04/anat/{sub-barcelona04_space-other_T1w_softseg_bin.nii.gz => sub-barcelona04_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-barcelona04/anat/{sub-barcelona04_space-other_T2star_softseg_bin.json => sub-barcelona04_space-other_T2star_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-barcelona04/anat/{sub-barcelona04_space-other_T2star_softseg_bin.nii.gz => sub-barcelona04_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-barcelona04/anat/{sub-barcelona04_space-other_T2w_softseg_bin.json => sub-barcelona04_space-other_T2w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-barcelona04/anat/{sub-barcelona04_space-other_T2w_softseg_bin.nii.gz => sub-barcelona04_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-barcelona04/dwi/{sub-barcelona04_rec-average_dwi_softseg_bin.json => sub-barcelona04_rec-average_dwi_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-barcelona04/dwi/{sub-barcelona04_rec-average_dwi_softseg_bin.nii.gz => sub-barcelona04_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-barcelona05/anat/{sub-barcelona05_flip-1_mt-on_space-other_MTS_softseg_bin.json => sub-barcelona05_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-barcelona05/anat/{sub-barcelona05_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz => sub-barcelona05_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-barcelona05/anat/{sub-barcelona05_flip-2_mt-off_space-other_MTS_softseg_bin.json => sub-barcelona05_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-barcelona05/anat/{sub-barcelona05_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz => sub-barcelona05_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-barcelona05/anat/{sub-barcelona05_space-other_T1w_softseg_bin.json => sub-barcelona05_space-other_T1w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-barcelona05/anat/{sub-barcelona05_space-other_T1w_softseg_bin.nii.gz => sub-barcelona05_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-barcelona05/anat/{sub-barcelona05_space-other_T2star_softseg_bin.json => sub-barcelona05_space-other_T2star_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-barcelona05/anat/{sub-barcelona05_space-other_T2star_softseg_bin.nii.gz => sub-barcelona05_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-barcelona05/anat/{sub-barcelona05_space-other_T2w_softseg_bin.json => sub-barcelona05_space-other_T2w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-barcelona05/anat/{sub-barcelona05_space-other_T2w_softseg_bin.nii.gz => sub-barcelona05_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-barcelona05/dwi/{sub-barcelona05_rec-average_dwi_softseg_bin.json => sub-barcelona05_rec-average_dwi_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-barcelona05/dwi/{sub-barcelona05_rec-average_dwi_softseg_bin.nii.gz => sub-barcelona05_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-barcelona06/anat/{sub-barcelona06_flip-1_mt-on_space-other_MTS_softseg_bin.json => sub-barcelona06_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-barcelona06/anat/{sub-barcelona06_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz => sub-barcelona06_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-barcelona06/anat/{sub-barcelona06_flip-2_mt-off_space-other_MTS_softseg_bin.json => sub-barcelona06_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-barcelona06/anat/{sub-barcelona06_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz => sub-barcelona06_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-barcelona06/anat/{sub-barcelona06_space-other_T1w_softseg_bin.json => sub-barcelona06_space-other_T1w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-barcelona06/anat/{sub-barcelona06_space-other_T1w_softseg_bin.nii.gz => sub-barcelona06_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-barcelona06/anat/{sub-barcelona06_space-other_T2star_softseg_bin.json => sub-barcelona06_space-other_T2star_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-barcelona06/anat/{sub-barcelona06_space-other_T2star_softseg_bin.nii.gz => sub-barcelona06_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-barcelona06/anat/{sub-barcelona06_space-other_T2w_softseg_bin.json => sub-barcelona06_space-other_T2w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-barcelona06/anat/{sub-barcelona06_space-other_T2w_softseg_bin.nii.gz => sub-barcelona06_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-barcelona06/dwi/{sub-barcelona06_rec-average_dwi_softseg_bin.json => sub-barcelona06_rec-average_dwi_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-barcelona06/dwi/{sub-barcelona06_rec-average_dwi_softseg_bin.nii.gz => sub-barcelona06_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-beijingPrisma01/anat/{sub-beijingPrisma01_flip-1_mt-on_space-other_MTS_softseg_bin.json => sub-beijingPrisma01_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-beijingPrisma01/anat/{sub-beijingPrisma01_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz => sub-beijingPrisma01_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-beijingPrisma01/anat/{sub-beijingPrisma01_flip-2_mt-off_space-other_MTS_softseg_bin.json => sub-beijingPrisma01_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-beijingPrisma01/anat/{sub-beijingPrisma01_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz => sub-beijingPrisma01_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-beijingPrisma01/anat/{sub-beijingPrisma01_space-other_T1w_softseg_bin.json => sub-beijingPrisma01_space-other_T1w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-beijingPrisma01/anat/{sub-beijingPrisma01_space-other_T1w_softseg_bin.nii.gz => sub-beijingPrisma01_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-beijingPrisma01/anat/{sub-beijingPrisma01_space-other_T2star_softseg_bin.json => sub-beijingPrisma01_space-other_T2star_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-beijingPrisma01/anat/{sub-beijingPrisma01_space-other_T2star_softseg_bin.nii.gz => sub-beijingPrisma01_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-beijingPrisma01/anat/{sub-beijingPrisma01_space-other_T2w_softseg_bin.json => sub-beijingPrisma01_space-other_T2w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-beijingPrisma01/anat/{sub-beijingPrisma01_space-other_T2w_softseg_bin.nii.gz => sub-beijingPrisma01_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-beijingPrisma01/dwi/{sub-beijingPrisma01_rec-average_dwi_softseg_bin.json => sub-beijingPrisma01_rec-average_dwi_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-beijingPrisma01/dwi/{sub-beijingPrisma01_rec-average_dwi_softseg_bin.nii.gz => sub-beijingPrisma01_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-beijingPrisma02/anat/{sub-beijingPrisma02_flip-1_mt-on_space-other_MTS_softseg_bin.json => sub-beijingPrisma02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-beijingPrisma02/anat/{sub-beijingPrisma02_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz => sub-beijingPrisma02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-beijingPrisma02/anat/{sub-beijingPrisma02_flip-2_mt-off_space-other_MTS_softseg_bin.json => sub-beijingPrisma02_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-beijingPrisma02/anat/{sub-beijingPrisma02_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz => sub-beijingPrisma02_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-beijingPrisma02/anat/{sub-beijingPrisma02_space-other_T1w_softseg_bin.json => sub-beijingPrisma02_space-other_T1w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-beijingPrisma02/anat/{sub-beijingPrisma02_space-other_T1w_softseg_bin.nii.gz => sub-beijingPrisma02_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-beijingPrisma02/anat/{sub-beijingPrisma02_space-other_T2star_softseg_bin.json => sub-beijingPrisma02_space-other_T2star_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-beijingPrisma02/anat/{sub-beijingPrisma02_space-other_T2star_softseg_bin.nii.gz => sub-beijingPrisma02_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-beijingPrisma02/anat/{sub-beijingPrisma02_space-other_T2w_softseg_bin.json => sub-beijingPrisma02_space-other_T2w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-beijingPrisma02/anat/{sub-beijingPrisma02_space-other_T2w_softseg_bin.nii.gz => sub-beijingPrisma02_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-beijingPrisma02/dwi/{sub-beijingPrisma02_rec-average_dwi_softseg_bin.json => sub-beijingPrisma02_rec-average_dwi_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-beijingPrisma02/dwi/{sub-beijingPrisma02_rec-average_dwi_softseg_bin.nii.gz => sub-beijingPrisma02_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-beijingPrisma03/anat/{sub-beijingPrisma03_flip-1_mt-on_space-other_MTS_softseg_bin.json => sub-beijingPrisma03_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-beijingPrisma03/anat/{sub-beijingPrisma03_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz => sub-beijingPrisma03_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-beijingPrisma03/anat/{sub-beijingPrisma03_flip-2_mt-off_space-other_MTS_softseg_bin.json => sub-beijingPrisma03_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-beijingPrisma03/anat/{sub-beijingPrisma03_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz => sub-beijingPrisma03_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-beijingPrisma03/anat/{sub-beijingPrisma03_space-other_T1w_softseg_bin.json => sub-beijingPrisma03_space-other_T1w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-beijingPrisma03/anat/{sub-beijingPrisma03_space-other_T1w_softseg_bin.nii.gz => sub-beijingPrisma03_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-beijingPrisma03/anat/{sub-beijingPrisma03_space-other_T2star_softseg_bin.json => sub-beijingPrisma03_space-other_T2star_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-beijingPrisma03/anat/{sub-beijingPrisma03_space-other_T2star_softseg_bin.nii.gz => sub-beijingPrisma03_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-beijingPrisma03/anat/{sub-beijingPrisma03_space-other_T2w_softseg_bin.json => sub-beijingPrisma03_space-other_T2w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-beijingPrisma03/anat/{sub-beijingPrisma03_space-other_T2w_softseg_bin.nii.gz => sub-beijingPrisma03_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-beijingPrisma03/dwi/{sub-beijingPrisma03_rec-average_dwi_softseg_bin.json => sub-beijingPrisma03_rec-average_dwi_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-beijingPrisma03/dwi/{sub-beijingPrisma03_rec-average_dwi_softseg_bin.nii.gz => sub-beijingPrisma03_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-beijingPrisma04/anat/{sub-beijingPrisma04_flip-1_mt-on_space-other_MTS_softseg_bin.json => sub-beijingPrisma04_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-beijingPrisma04/anat/{sub-beijingPrisma04_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz => sub-beijingPrisma04_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-beijingPrisma04/anat/{sub-beijingPrisma04_flip-2_mt-off_space-other_MTS_softseg_bin.json => sub-beijingPrisma04_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-beijingPrisma04/anat/{sub-beijingPrisma04_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz => sub-beijingPrisma04_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-beijingPrisma04/anat/{sub-beijingPrisma04_space-other_T1w_softseg_bin.json => sub-beijingPrisma04_space-other_T1w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-beijingPrisma04/anat/{sub-beijingPrisma04_space-other_T1w_softseg_bin.nii.gz => sub-beijingPrisma04_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-beijingPrisma04/anat/{sub-beijingPrisma04_space-other_T2star_softseg_bin.json => sub-beijingPrisma04_space-other_T2star_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-beijingPrisma04/anat/{sub-beijingPrisma04_space-other_T2star_softseg_bin.nii.gz => sub-beijingPrisma04_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-beijingPrisma04/anat/{sub-beijingPrisma04_space-other_T2w_softseg_bin.json => sub-beijingPrisma04_space-other_T2w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-beijingPrisma04/anat/{sub-beijingPrisma04_space-other_T2w_softseg_bin.nii.gz => sub-beijingPrisma04_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-beijingPrisma04/dwi/{sub-beijingPrisma04_rec-average_dwi_softseg_bin.json => sub-beijingPrisma04_rec-average_dwi_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-beijingPrisma04/dwi/{sub-beijingPrisma04_rec-average_dwi_softseg_bin.nii.gz => sub-beijingPrisma04_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-beijingPrisma05/anat/{sub-beijingPrisma05_flip-1_mt-on_space-other_MTS_softseg_bin.json => sub-beijingPrisma05_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-beijingPrisma05/anat/{sub-beijingPrisma05_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz => sub-beijingPrisma05_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-beijingPrisma05/anat/{sub-beijingPrisma05_flip-2_mt-off_space-other_MTS_softseg_bin.json => sub-beijingPrisma05_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-beijingPrisma05/anat/{sub-beijingPrisma05_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz => sub-beijingPrisma05_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-beijingPrisma05/anat/{sub-beijingPrisma05_space-other_T1w_softseg_bin.json => sub-beijingPrisma05_space-other_T1w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-beijingPrisma05/anat/{sub-beijingPrisma05_space-other_T1w_softseg_bin.nii.gz => sub-beijingPrisma05_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-beijingPrisma05/anat/{sub-beijingPrisma05_space-other_T2star_softseg_bin.json => sub-beijingPrisma05_space-other_T2star_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-beijingPrisma05/anat/{sub-beijingPrisma05_space-other_T2star_softseg_bin.nii.gz => sub-beijingPrisma05_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-beijingPrisma05/anat/{sub-beijingPrisma05_space-other_T2w_softseg_bin.json => sub-beijingPrisma05_space-other_T2w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-beijingPrisma05/anat/{sub-beijingPrisma05_space-other_T2w_softseg_bin.nii.gz => sub-beijingPrisma05_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-beijingPrisma05/dwi/{sub-beijingPrisma05_rec-average_dwi_softseg_bin.json => sub-beijingPrisma05_rec-average_dwi_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-beijingPrisma05/dwi/{sub-beijingPrisma05_rec-average_dwi_softseg_bin.nii.gz => sub-beijingPrisma05_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-brnoCeitec01/anat/{sub-brnoCeitec01_flip-1_mt-on_space-other_MTS_softseg_bin.json => sub-brnoCeitec01_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-brnoCeitec01/anat/{sub-brnoCeitec01_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz => sub-brnoCeitec01_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-brnoCeitec01/anat/{sub-brnoCeitec01_flip-2_mt-off_space-other_MTS_softseg_bin.json => sub-brnoCeitec01_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-brnoCeitec01/anat/{sub-brnoCeitec01_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz => sub-brnoCeitec01_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-brnoCeitec01/anat/{sub-brnoCeitec01_space-other_T1w_softseg_bin.json => sub-brnoCeitec01_space-other_T1w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-brnoCeitec01/anat/{sub-brnoCeitec01_space-other_T1w_softseg_bin.nii.gz => sub-brnoCeitec01_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-brnoCeitec01/anat/{sub-brnoCeitec01_space-other_T2star_softseg_bin.json => sub-brnoCeitec01_space-other_T2star_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-brnoCeitec01/anat/{sub-brnoCeitec01_space-other_T2star_softseg_bin.nii.gz => sub-brnoCeitec01_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-brnoCeitec01/anat/{sub-brnoCeitec01_space-other_T2w_softseg_bin.json => sub-brnoCeitec01_space-other_T2w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-brnoCeitec01/anat/{sub-brnoCeitec01_space-other_T2w_softseg_bin.nii.gz => sub-brnoCeitec01_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-brnoCeitec01/dwi/{sub-brnoCeitec01_rec-average_dwi_softseg_bin.json => sub-brnoCeitec01_rec-average_dwi_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-brnoCeitec01/dwi/{sub-brnoCeitec01_rec-average_dwi_softseg_bin.nii.gz => sub-brnoCeitec01_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-brnoCeitec02/anat/{sub-brnoCeitec02_flip-1_mt-on_space-other_MTS_softseg_bin.json => sub-brnoCeitec02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-brnoCeitec02/anat/{sub-brnoCeitec02_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz => sub-brnoCeitec02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-brnoCeitec02/anat/{sub-brnoCeitec02_flip-2_mt-off_space-other_MTS_softseg_bin.json => sub-brnoCeitec02_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-brnoCeitec02/anat/{sub-brnoCeitec02_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz => sub-brnoCeitec02_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-brnoCeitec02/anat/{sub-brnoCeitec02_space-other_T1w_softseg_bin.json => sub-brnoCeitec02_space-other_T1w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-brnoCeitec02/anat/{sub-brnoCeitec02_space-other_T1w_softseg_bin.nii.gz => sub-brnoCeitec02_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-brnoCeitec02/anat/{sub-brnoCeitec02_space-other_T2star_softseg_bin.json => sub-brnoCeitec02_space-other_T2star_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-brnoCeitec02/anat/{sub-brnoCeitec02_space-other_T2star_softseg_bin.nii.gz => sub-brnoCeitec02_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-brnoCeitec02/anat/{sub-brnoCeitec02_space-other_T2w_softseg_bin.json => sub-brnoCeitec02_space-other_T2w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-brnoCeitec02/anat/{sub-brnoCeitec02_space-other_T2w_softseg_bin.nii.gz => sub-brnoCeitec02_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-brnoCeitec02/dwi/{sub-brnoCeitec02_rec-average_dwi_softseg_bin.json => sub-brnoCeitec02_rec-average_dwi_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-brnoCeitec02/dwi/{sub-brnoCeitec02_rec-average_dwi_softseg_bin.nii.gz => sub-brnoCeitec02_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-brnoCeitec03/anat/{sub-brnoCeitec03_flip-1_mt-on_space-other_MTS_softseg_bin.json => sub-brnoCeitec03_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-brnoCeitec03/anat/{sub-brnoCeitec03_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz => sub-brnoCeitec03_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-brnoCeitec03/anat/{sub-brnoCeitec03_flip-2_mt-off_space-other_MTS_softseg_bin.json => sub-brnoCeitec03_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-brnoCeitec03/anat/{sub-brnoCeitec03_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz => sub-brnoCeitec03_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-brnoCeitec03/anat/{sub-brnoCeitec03_space-other_T1w_softseg_bin.json => sub-brnoCeitec03_space-other_T1w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-brnoCeitec03/anat/{sub-brnoCeitec03_space-other_T1w_softseg_bin.nii.gz => sub-brnoCeitec03_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-brnoCeitec03/anat/{sub-brnoCeitec03_space-other_T2star_softseg_bin.json => sub-brnoCeitec03_space-other_T2star_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-brnoCeitec03/anat/{sub-brnoCeitec03_space-other_T2star_softseg_bin.nii.gz => sub-brnoCeitec03_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-brnoCeitec03/anat/{sub-brnoCeitec03_space-other_T2w_softseg_bin.json => sub-brnoCeitec03_space-other_T2w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-brnoCeitec03/anat/{sub-brnoCeitec03_space-other_T2w_softseg_bin.nii.gz => sub-brnoCeitec03_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-brnoCeitec03/dwi/{sub-brnoCeitec03_rec-average_dwi_softseg_bin.json => sub-brnoCeitec03_rec-average_dwi_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-brnoCeitec03/dwi/{sub-brnoCeitec03_rec-average_dwi_softseg_bin.nii.gz => sub-brnoCeitec03_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-brnoCeitec04/anat/{sub-brnoCeitec04_flip-1_mt-on_space-other_MTS_softseg_bin.json => sub-brnoCeitec04_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-brnoCeitec04/anat/{sub-brnoCeitec04_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz => sub-brnoCeitec04_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-brnoCeitec04/anat/{sub-brnoCeitec04_flip-2_mt-off_space-other_MTS_softseg_bin.json => sub-brnoCeitec04_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-brnoCeitec04/anat/{sub-brnoCeitec04_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz => sub-brnoCeitec04_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-brnoCeitec04/anat/{sub-brnoCeitec04_space-other_T1w_softseg_bin.json => sub-brnoCeitec04_space-other_T1w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-brnoCeitec04/anat/{sub-brnoCeitec04_space-other_T1w_softseg_bin.nii.gz => sub-brnoCeitec04_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-brnoCeitec04/anat/{sub-brnoCeitec04_space-other_T2star_softseg_bin.json => sub-brnoCeitec04_space-other_T2star_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-brnoCeitec04/anat/{sub-brnoCeitec04_space-other_T2star_softseg_bin.nii.gz => sub-brnoCeitec04_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-brnoCeitec04/anat/{sub-brnoCeitec04_space-other_T2w_softseg_bin.json => sub-brnoCeitec04_space-other_T2w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-brnoCeitec04/anat/{sub-brnoCeitec04_space-other_T2w_softseg_bin.nii.gz => sub-brnoCeitec04_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-brnoCeitec04/dwi/{sub-brnoCeitec04_rec-average_dwi_softseg_bin.json => sub-brnoCeitec04_rec-average_dwi_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-brnoCeitec04/dwi/{sub-brnoCeitec04_rec-average_dwi_softseg_bin.nii.gz => sub-brnoCeitec04_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-brnoCeitec05/anat/{sub-brnoCeitec05_flip-1_mt-on_space-other_MTS_softseg_bin.json => sub-brnoCeitec05_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-brnoCeitec05/anat/{sub-brnoCeitec05_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz => sub-brnoCeitec05_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-brnoCeitec05/anat/{sub-brnoCeitec05_flip-2_mt-off_space-other_MTS_softseg_bin.json => sub-brnoCeitec05_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-brnoCeitec05/anat/{sub-brnoCeitec05_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz => sub-brnoCeitec05_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-brnoCeitec05/anat/{sub-brnoCeitec05_space-other_T1w_softseg_bin.json => sub-brnoCeitec05_space-other_T1w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-brnoCeitec05/anat/{sub-brnoCeitec05_space-other_T1w_softseg_bin.nii.gz => sub-brnoCeitec05_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-brnoCeitec05/anat/{sub-brnoCeitec05_space-other_T2star_softseg_bin.json => sub-brnoCeitec05_space-other_T2star_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-brnoCeitec05/anat/{sub-brnoCeitec05_space-other_T2star_softseg_bin.nii.gz => sub-brnoCeitec05_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-brnoCeitec05/anat/{sub-brnoCeitec05_space-other_T2w_softseg_bin.json => sub-brnoCeitec05_space-other_T2w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-brnoCeitec05/anat/{sub-brnoCeitec05_space-other_T2w_softseg_bin.nii.gz => sub-brnoCeitec05_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-brnoCeitec05/dwi/{sub-brnoCeitec05_rec-average_dwi_softseg_bin.json => sub-brnoCeitec05_rec-average_dwi_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-brnoCeitec05/dwi/{sub-brnoCeitec05_rec-average_dwi_softseg_bin.nii.gz => sub-brnoCeitec05_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-brnoCeitec06/anat/{sub-brnoCeitec06_flip-1_mt-on_space-other_MTS_softseg_bin.json => sub-brnoCeitec06_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-brnoCeitec06/anat/{sub-brnoCeitec06_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz => sub-brnoCeitec06_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-brnoCeitec06/anat/{sub-brnoCeitec06_flip-2_mt-off_space-other_MTS_softseg_bin.json => sub-brnoCeitec06_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-brnoCeitec06/anat/{sub-brnoCeitec06_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz => sub-brnoCeitec06_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-brnoCeitec06/anat/{sub-brnoCeitec06_space-other_T1w_softseg_bin.json => sub-brnoCeitec06_space-other_T1w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-brnoCeitec06/anat/{sub-brnoCeitec06_space-other_T1w_softseg_bin.nii.gz => sub-brnoCeitec06_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-brnoCeitec06/anat/{sub-brnoCeitec06_space-other_T2star_softseg_bin.json => sub-brnoCeitec06_space-other_T2star_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-brnoCeitec06/anat/{sub-brnoCeitec06_space-other_T2star_softseg_bin.nii.gz => sub-brnoCeitec06_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-brnoCeitec06/anat/{sub-brnoCeitec06_space-other_T2w_softseg_bin.json => sub-brnoCeitec06_space-other_T2w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-brnoCeitec06/anat/{sub-brnoCeitec06_space-other_T2w_softseg_bin.nii.gz => sub-brnoCeitec06_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-brnoCeitec06/dwi/{sub-brnoCeitec06_rec-average_dwi_softseg_bin.json => sub-brnoCeitec06_rec-average_dwi_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-brnoCeitec06/dwi/{sub-brnoCeitec06_rec-average_dwi_softseg_bin.nii.gz => sub-brnoCeitec06_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-brnoUhb01/anat/{sub-brnoUhb01_flip-1_mt-on_space-other_MTS_softseg_bin.json => sub-brnoUhb01_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-brnoUhb01/anat/{sub-brnoUhb01_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz => sub-brnoUhb01_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-brnoUhb01/anat/{sub-brnoUhb01_flip-2_mt-off_space-other_MTS_softseg_bin.json => sub-brnoUhb01_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-brnoUhb01/anat/{sub-brnoUhb01_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz => sub-brnoUhb01_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-brnoUhb01/anat/{sub-brnoUhb01_space-other_T1w_softseg_bin.json => sub-brnoUhb01_space-other_T1w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-brnoUhb01/anat/{sub-brnoUhb01_space-other_T1w_softseg_bin.nii.gz => sub-brnoUhb01_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-brnoUhb01/anat/{sub-brnoUhb01_space-other_T2star_softseg_bin.json => sub-brnoUhb01_space-other_T2star_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-brnoUhb01/anat/{sub-brnoUhb01_space-other_T2star_softseg_bin.nii.gz => sub-brnoUhb01_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-brnoUhb01/anat/{sub-brnoUhb01_space-other_T2w_softseg_bin.json => sub-brnoUhb01_space-other_T2w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-brnoUhb01/anat/{sub-brnoUhb01_space-other_T2w_softseg_bin.nii.gz => sub-brnoUhb01_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-brnoUhb01/dwi/{sub-brnoUhb01_rec-average_dwi_softseg_bin.json => sub-brnoUhb01_rec-average_dwi_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-brnoUhb01/dwi/{sub-brnoUhb01_rec-average_dwi_softseg_bin.nii.gz => sub-brnoUhb01_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-brnoUhb04/anat/{sub-brnoUhb04_flip-1_mt-on_space-other_MTS_softseg_bin.json => sub-brnoUhb04_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-brnoUhb04/anat/{sub-brnoUhb04_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz => sub-brnoUhb04_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-brnoUhb04/anat/{sub-brnoUhb04_flip-2_mt-off_space-other_MTS_softseg_bin.json => sub-brnoUhb04_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-brnoUhb04/anat/{sub-brnoUhb04_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz => sub-brnoUhb04_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-brnoUhb04/anat/{sub-brnoUhb04_space-other_T1w_softseg_bin.json => sub-brnoUhb04_space-other_T1w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-brnoUhb04/anat/{sub-brnoUhb04_space-other_T1w_softseg_bin.nii.gz => sub-brnoUhb04_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-brnoUhb04/anat/{sub-brnoUhb04_space-other_T2star_softseg_bin.json => sub-brnoUhb04_space-other_T2star_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-brnoUhb04/anat/{sub-brnoUhb04_space-other_T2star_softseg_bin.nii.gz => sub-brnoUhb04_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-brnoUhb04/anat/{sub-brnoUhb04_space-other_T2w_softseg_bin.json => sub-brnoUhb04_space-other_T2w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-brnoUhb04/anat/{sub-brnoUhb04_space-other_T2w_softseg_bin.nii.gz => sub-brnoUhb04_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-brnoUhb04/dwi/{sub-brnoUhb04_rec-average_dwi_softseg_bin.json => sub-brnoUhb04_rec-average_dwi_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-brnoUhb04/dwi/{sub-brnoUhb04_rec-average_dwi_softseg_bin.nii.gz => sub-brnoUhb04_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-brnoUhb05/anat/{sub-brnoUhb05_flip-1_mt-on_space-other_MTS_softseg_bin.json => sub-brnoUhb05_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-brnoUhb05/anat/{sub-brnoUhb05_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz => sub-brnoUhb05_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-brnoUhb05/anat/{sub-brnoUhb05_flip-2_mt-off_space-other_MTS_softseg_bin.json => sub-brnoUhb05_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-brnoUhb05/anat/{sub-brnoUhb05_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz => sub-brnoUhb05_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-brnoUhb05/anat/{sub-brnoUhb05_space-other_T1w_softseg_bin.json => sub-brnoUhb05_space-other_T1w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-brnoUhb05/anat/{sub-brnoUhb05_space-other_T1w_softseg_bin.nii.gz => sub-brnoUhb05_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-brnoUhb05/anat/{sub-brnoUhb05_space-other_T2star_softseg_bin.json => sub-brnoUhb05_space-other_T2star_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-brnoUhb05/anat/{sub-brnoUhb05_space-other_T2star_softseg_bin.nii.gz => sub-brnoUhb05_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-brnoUhb05/anat/{sub-brnoUhb05_space-other_T2w_softseg_bin.json => sub-brnoUhb05_space-other_T2w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-brnoUhb05/anat/{sub-brnoUhb05_space-other_T2w_softseg_bin.nii.gz => sub-brnoUhb05_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-brnoUhb05/dwi/{sub-brnoUhb05_rec-average_dwi_softseg_bin.json => sub-brnoUhb05_rec-average_dwi_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-brnoUhb05/dwi/{sub-brnoUhb05_rec-average_dwi_softseg_bin.nii.gz => sub-brnoUhb05_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-brnoUhb06/anat/{sub-brnoUhb06_flip-1_mt-on_space-other_MTS_softseg_bin.json => sub-brnoUhb06_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-brnoUhb06/anat/{sub-brnoUhb06_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz => sub-brnoUhb06_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-brnoUhb06/anat/{sub-brnoUhb06_flip-2_mt-off_space-other_MTS_softseg_bin.json => sub-brnoUhb06_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-brnoUhb06/anat/{sub-brnoUhb06_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz => sub-brnoUhb06_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-brnoUhb06/anat/{sub-brnoUhb06_space-other_T1w_softseg_bin.json => sub-brnoUhb06_space-other_T1w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-brnoUhb06/anat/{sub-brnoUhb06_space-other_T1w_softseg_bin.nii.gz => sub-brnoUhb06_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-brnoUhb06/anat/{sub-brnoUhb06_space-other_T2star_softseg_bin.json => sub-brnoUhb06_space-other_T2star_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-brnoUhb06/anat/{sub-brnoUhb06_space-other_T2star_softseg_bin.nii.gz => sub-brnoUhb06_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-brnoUhb06/anat/{sub-brnoUhb06_space-other_T2w_softseg_bin.json => sub-brnoUhb06_space-other_T2w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-brnoUhb06/anat/{sub-brnoUhb06_space-other_T2w_softseg_bin.nii.gz => sub-brnoUhb06_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-brnoUhb06/dwi/{sub-brnoUhb06_rec-average_dwi_softseg_bin.json => sub-brnoUhb06_rec-average_dwi_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-brnoUhb06/dwi/{sub-brnoUhb06_rec-average_dwi_softseg_bin.nii.gz => sub-brnoUhb06_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-cardiff01/anat/{sub-cardiff01_flip-1_mt-on_space-other_MTS_softseg_bin.json => sub-cardiff01_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-cardiff01/anat/{sub-cardiff01_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz => sub-cardiff01_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-cardiff01/anat/{sub-cardiff01_flip-2_mt-off_space-other_MTS_softseg_bin.json => sub-cardiff01_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-cardiff01/anat/{sub-cardiff01_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz => sub-cardiff01_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-cardiff01/anat/{sub-cardiff01_space-other_T1w_softseg_bin.json => sub-cardiff01_space-other_T1w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-cardiff01/anat/{sub-cardiff01_space-other_T1w_softseg_bin.nii.gz => sub-cardiff01_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-cardiff01/anat/{sub-cardiff01_space-other_T2star_softseg_bin.json => sub-cardiff01_space-other_T2star_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-cardiff01/anat/{sub-cardiff01_space-other_T2star_softseg_bin.nii.gz => sub-cardiff01_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-cardiff01/anat/{sub-cardiff01_space-other_T2w_softseg_bin.json => sub-cardiff01_space-other_T2w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-cardiff01/anat/{sub-cardiff01_space-other_T2w_softseg_bin.nii.gz => sub-cardiff01_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-cardiff01/dwi/{sub-cardiff01_rec-average_dwi_softseg_bin.json => sub-cardiff01_rec-average_dwi_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-cardiff01/dwi/{sub-cardiff01_rec-average_dwi_softseg_bin.nii.gz => sub-cardiff01_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-cardiff02/anat/{sub-cardiff02_flip-1_mt-on_space-other_MTS_softseg_bin.json => sub-cardiff02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-cardiff02/anat/{sub-cardiff02_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz => sub-cardiff02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-cardiff02/anat/{sub-cardiff02_flip-2_mt-off_space-other_MTS_softseg_bin.json => sub-cardiff02_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-cardiff02/anat/{sub-cardiff02_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz => sub-cardiff02_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-cardiff02/anat/{sub-cardiff02_space-other_T1w_softseg_bin.json => sub-cardiff02_space-other_T1w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-cardiff02/anat/{sub-cardiff02_space-other_T1w_softseg_bin.nii.gz => sub-cardiff02_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-cardiff02/anat/{sub-cardiff02_space-other_T2star_softseg_bin.json => sub-cardiff02_space-other_T2star_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-cardiff02/anat/{sub-cardiff02_space-other_T2star_softseg_bin.nii.gz => sub-cardiff02_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-cardiff02/anat/{sub-cardiff02_space-other_T2w_softseg_bin.json => sub-cardiff02_space-other_T2w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-cardiff02/anat/{sub-cardiff02_space-other_T2w_softseg_bin.nii.gz => sub-cardiff02_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-cardiff02/dwi/{sub-cardiff02_rec-average_dwi_softseg_bin.json => sub-cardiff02_rec-average_dwi_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-cardiff02/dwi/{sub-cardiff02_rec-average_dwi_softseg_bin.nii.gz => sub-cardiff02_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-cardiff03/anat/{sub-cardiff03_flip-1_mt-on_space-other_MTS_softseg_bin.json => sub-cardiff03_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-cardiff03/anat/{sub-cardiff03_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz => sub-cardiff03_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-cardiff03/anat/{sub-cardiff03_flip-2_mt-off_space-other_MTS_softseg_bin.json => sub-cardiff03_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-cardiff03/anat/{sub-cardiff03_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz => sub-cardiff03_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-cardiff03/anat/{sub-cardiff03_space-other_T1w_softseg_bin.json => sub-cardiff03_space-other_T1w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-cardiff03/anat/{sub-cardiff03_space-other_T1w_softseg_bin.nii.gz => sub-cardiff03_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-cardiff03/anat/{sub-cardiff03_space-other_T2star_softseg_bin.json => sub-cardiff03_space-other_T2star_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-cardiff03/anat/{sub-cardiff03_space-other_T2star_softseg_bin.nii.gz => sub-cardiff03_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-cardiff03/anat/{sub-cardiff03_space-other_T2w_softseg_bin.json => sub-cardiff03_space-other_T2w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-cardiff03/anat/{sub-cardiff03_space-other_T2w_softseg_bin.nii.gz => sub-cardiff03_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-cardiff03/dwi/{sub-cardiff03_rec-average_dwi_softseg_bin.json => sub-cardiff03_rec-average_dwi_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-cardiff03/dwi/{sub-cardiff03_rec-average_dwi_softseg_bin.nii.gz => sub-cardiff03_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-cardiff04/anat/{sub-cardiff04_flip-1_mt-on_space-other_MTS_softseg_bin.json => sub-cardiff04_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-cardiff04/anat/{sub-cardiff04_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz => sub-cardiff04_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-cardiff04/anat/{sub-cardiff04_flip-2_mt-off_space-other_MTS_softseg_bin.json => sub-cardiff04_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-cardiff04/anat/{sub-cardiff04_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz => sub-cardiff04_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-cardiff04/anat/{sub-cardiff04_space-other_T1w_softseg_bin.json => sub-cardiff04_space-other_T1w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-cardiff04/anat/{sub-cardiff04_space-other_T1w_softseg_bin.nii.gz => sub-cardiff04_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-cardiff04/anat/{sub-cardiff04_space-other_T2star_softseg_bin.json => sub-cardiff04_space-other_T2star_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-cardiff04/anat/{sub-cardiff04_space-other_T2star_softseg_bin.nii.gz => sub-cardiff04_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-cardiff04/anat/{sub-cardiff04_space-other_T2w_softseg_bin.json => sub-cardiff04_space-other_T2w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-cardiff04/anat/{sub-cardiff04_space-other_T2w_softseg_bin.nii.gz => sub-cardiff04_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-cardiff04/dwi/{sub-cardiff04_rec-average_dwi_softseg_bin.json => sub-cardiff04_rec-average_dwi_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-cardiff04/dwi/{sub-cardiff04_rec-average_dwi_softseg_bin.nii.gz => sub-cardiff04_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-cardiff05/anat/{sub-cardiff05_flip-1_mt-on_space-other_MTS_softseg_bin.json => sub-cardiff05_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-cardiff05/anat/{sub-cardiff05_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz => sub-cardiff05_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-cardiff05/anat/{sub-cardiff05_flip-2_mt-off_space-other_MTS_softseg_bin.json => sub-cardiff05_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-cardiff05/anat/{sub-cardiff05_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz => sub-cardiff05_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-cardiff05/anat/{sub-cardiff05_space-other_T1w_softseg_bin.json => sub-cardiff05_space-other_T1w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-cardiff05/anat/{sub-cardiff05_space-other_T1w_softseg_bin.nii.gz => sub-cardiff05_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-cardiff05/anat/{sub-cardiff05_space-other_T2star_softseg_bin.json => sub-cardiff05_space-other_T2star_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-cardiff05/anat/{sub-cardiff05_space-other_T2star_softseg_bin.nii.gz => sub-cardiff05_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-cardiff05/anat/{sub-cardiff05_space-other_T2w_softseg_bin.json => sub-cardiff05_space-other_T2w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-cardiff05/anat/{sub-cardiff05_space-other_T2w_softseg_bin.nii.gz => sub-cardiff05_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-cardiff05/dwi/{sub-cardiff05_rec-average_dwi_softseg_bin.json => sub-cardiff05_rec-average_dwi_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-cardiff05/dwi/{sub-cardiff05_rec-average_dwi_softseg_bin.nii.gz => sub-cardiff05_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-cardiff06/anat/{sub-cardiff06_flip-1_mt-on_space-other_MTS_softseg_bin.json => sub-cardiff06_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-cardiff06/anat/{sub-cardiff06_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz => sub-cardiff06_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-cardiff06/anat/{sub-cardiff06_flip-2_mt-off_space-other_MTS_softseg_bin.json => sub-cardiff06_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-cardiff06/anat/{sub-cardiff06_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz => sub-cardiff06_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-cardiff06/anat/{sub-cardiff06_space-other_T1w_softseg_bin.json => sub-cardiff06_space-other_T1w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-cardiff06/anat/{sub-cardiff06_space-other_T1w_softseg_bin.nii.gz => sub-cardiff06_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-cardiff06/anat/{sub-cardiff06_space-other_T2star_softseg_bin.json => sub-cardiff06_space-other_T2star_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-cardiff06/anat/{sub-cardiff06_space-other_T2star_softseg_bin.nii.gz => sub-cardiff06_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-cardiff06/anat/{sub-cardiff06_space-other_T2w_softseg_bin.json => sub-cardiff06_space-other_T2w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-cardiff06/anat/{sub-cardiff06_space-other_T2w_softseg_bin.nii.gz => sub-cardiff06_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-cardiff06/dwi/{sub-cardiff06_rec-average_dwi_softseg_bin.json => sub-cardiff06_rec-average_dwi_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-cardiff06/dwi/{sub-cardiff06_rec-average_dwi_softseg_bin.nii.gz => sub-cardiff06_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-cmrra01/anat/{sub-cmrra01_flip-1_mt-on_space-other_MTS_softseg_bin.json => sub-cmrra01_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-cmrra01/anat/{sub-cmrra01_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz => sub-cmrra01_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-cmrra01/anat/{sub-cmrra01_flip-2_mt-off_space-other_MTS_softseg_bin.json => sub-cmrra01_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-cmrra01/anat/{sub-cmrra01_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz => sub-cmrra01_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-cmrra01/anat/{sub-cmrra01_space-other_T1w_softseg_bin.json => sub-cmrra01_space-other_T1w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-cmrra01/anat/{sub-cmrra01_space-other_T1w_softseg_bin.nii.gz => sub-cmrra01_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-cmrra01/anat/{sub-cmrra01_space-other_T2star_softseg_bin.json => sub-cmrra01_space-other_T2star_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-cmrra01/anat/{sub-cmrra01_space-other_T2star_softseg_bin.nii.gz => sub-cmrra01_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-cmrra01/anat/{sub-cmrra01_space-other_T2w_softseg_bin.json => sub-cmrra01_space-other_T2w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-cmrra01/anat/{sub-cmrra01_space-other_T2w_softseg_bin.nii.gz => sub-cmrra01_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-cmrra01/dwi/{sub-cmrra01_rec-average_dwi_softseg_bin.json => sub-cmrra01_rec-average_dwi_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-cmrra01/dwi/{sub-cmrra01_rec-average_dwi_softseg_bin.nii.gz => sub-cmrra01_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-cmrra02/anat/{sub-cmrra02_flip-1_mt-on_space-other_MTS_softseg_bin.json => sub-cmrra02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-cmrra02/anat/{sub-cmrra02_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz => sub-cmrra02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-cmrra02/anat/{sub-cmrra02_flip-2_mt-off_space-other_MTS_softseg_bin.json => sub-cmrra02_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-cmrra02/anat/{sub-cmrra02_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz => sub-cmrra02_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-cmrra02/anat/{sub-cmrra02_space-other_T1w_softseg_bin.json => sub-cmrra02_space-other_T1w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-cmrra02/anat/{sub-cmrra02_space-other_T1w_softseg_bin.nii.gz => sub-cmrra02_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-cmrra02/anat/{sub-cmrra02_space-other_T2star_softseg_bin.json => sub-cmrra02_space-other_T2star_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-cmrra02/anat/{sub-cmrra02_space-other_T2star_softseg_bin.nii.gz => sub-cmrra02_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-cmrra02/anat/{sub-cmrra02_space-other_T2w_softseg_bin.json => sub-cmrra02_space-other_T2w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-cmrra02/anat/{sub-cmrra02_space-other_T2w_softseg_bin.nii.gz => sub-cmrra02_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-cmrra02/dwi/{sub-cmrra02_rec-average_dwi_softseg_bin.json => sub-cmrra02_rec-average_dwi_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-cmrra02/dwi/{sub-cmrra02_rec-average_dwi_softseg_bin.nii.gz => sub-cmrra02_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-cmrra03/anat/{sub-cmrra03_flip-1_mt-on_space-other_MTS_softseg_bin.json => sub-cmrra03_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-cmrra03/anat/{sub-cmrra03_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz => sub-cmrra03_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-cmrra03/anat/{sub-cmrra03_flip-2_mt-off_space-other_MTS_softseg_bin.json => sub-cmrra03_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-cmrra03/anat/{sub-cmrra03_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz => sub-cmrra03_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-cmrra03/anat/{sub-cmrra03_space-other_T1w_softseg_bin.json => sub-cmrra03_space-other_T1w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-cmrra03/anat/{sub-cmrra03_space-other_T1w_softseg_bin.nii.gz => sub-cmrra03_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-cmrra03/anat/{sub-cmrra03_space-other_T2star_softseg_bin.json => sub-cmrra03_space-other_T2star_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-cmrra03/anat/{sub-cmrra03_space-other_T2star_softseg_bin.nii.gz => sub-cmrra03_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-cmrra03/anat/{sub-cmrra03_space-other_T2w_softseg_bin.json => sub-cmrra03_space-other_T2w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-cmrra03/anat/{sub-cmrra03_space-other_T2w_softseg_bin.nii.gz => sub-cmrra03_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-cmrra03/dwi/{sub-cmrra03_rec-average_dwi_softseg_bin.json => sub-cmrra03_rec-average_dwi_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-cmrra03/dwi/{sub-cmrra03_rec-average_dwi_softseg_bin.nii.gz => sub-cmrra03_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-cmrra04/anat/{sub-cmrra04_flip-1_mt-on_space-other_MTS_softseg_bin.json => sub-cmrra04_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-cmrra04/anat/{sub-cmrra04_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz => sub-cmrra04_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-cmrra04/anat/{sub-cmrra04_flip-2_mt-off_space-other_MTS_softseg_bin.json => sub-cmrra04_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-cmrra04/anat/{sub-cmrra04_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz => sub-cmrra04_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-cmrra04/anat/{sub-cmrra04_space-other_T1w_softseg_bin.json => sub-cmrra04_space-other_T1w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-cmrra04/anat/{sub-cmrra04_space-other_T1w_softseg_bin.nii.gz => sub-cmrra04_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-cmrra04/anat/{sub-cmrra04_space-other_T2star_softseg_bin.json => sub-cmrra04_space-other_T2star_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-cmrra04/anat/{sub-cmrra04_space-other_T2star_softseg_bin.nii.gz => sub-cmrra04_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-cmrra04/anat/{sub-cmrra04_space-other_T2w_softseg_bin.json => sub-cmrra04_space-other_T2w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-cmrra04/anat/{sub-cmrra04_space-other_T2w_softseg_bin.nii.gz => sub-cmrra04_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-cmrra04/dwi/{sub-cmrra04_rec-average_dwi_softseg_bin.json => sub-cmrra04_rec-average_dwi_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-cmrra04/dwi/{sub-cmrra04_rec-average_dwi_softseg_bin.nii.gz => sub-cmrra04_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-cmrra05/anat/{sub-cmrra05_flip-1_mt-on_space-other_MTS_softseg_bin.json => sub-cmrra05_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-cmrra05/anat/{sub-cmrra05_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz => sub-cmrra05_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-cmrra05/anat/{sub-cmrra05_flip-2_mt-off_space-other_MTS_softseg_bin.json => sub-cmrra05_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-cmrra05/anat/{sub-cmrra05_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz => sub-cmrra05_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-cmrra05/anat/{sub-cmrra05_space-other_T1w_softseg_bin.json => sub-cmrra05_space-other_T1w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-cmrra05/anat/{sub-cmrra05_space-other_T1w_softseg_bin.nii.gz => sub-cmrra05_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-cmrra05/anat/{sub-cmrra05_space-other_T2star_softseg_bin.json => sub-cmrra05_space-other_T2star_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-cmrra05/anat/{sub-cmrra05_space-other_T2star_softseg_bin.nii.gz => sub-cmrra05_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-cmrra05/anat/{sub-cmrra05_space-other_T2w_softseg_bin.json => sub-cmrra05_space-other_T2w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-cmrra05/anat/{sub-cmrra05_space-other_T2w_softseg_bin.nii.gz => sub-cmrra05_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-cmrra05/dwi/{sub-cmrra05_rec-average_dwi_softseg_bin.json => sub-cmrra05_rec-average_dwi_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-cmrra05/dwi/{sub-cmrra05_rec-average_dwi_softseg_bin.nii.gz => sub-cmrra05_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-cmrra06/anat/{sub-cmrra06_flip-1_mt-on_space-other_MTS_softseg_bin.json => sub-cmrra06_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-cmrra06/anat/{sub-cmrra06_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz => sub-cmrra06_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-cmrra06/anat/{sub-cmrra06_flip-2_mt-off_space-other_MTS_softseg_bin.json => sub-cmrra06_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-cmrra06/anat/{sub-cmrra06_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz => sub-cmrra06_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-cmrra06/anat/{sub-cmrra06_space-other_T1w_softseg_bin.json => sub-cmrra06_space-other_T1w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-cmrra06/anat/{sub-cmrra06_space-other_T1w_softseg_bin.nii.gz => sub-cmrra06_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-cmrra06/anat/{sub-cmrra06_space-other_T2star_softseg_bin.json => sub-cmrra06_space-other_T2star_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-cmrra06/anat/{sub-cmrra06_space-other_T2star_softseg_bin.nii.gz => sub-cmrra06_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-cmrra06/anat/{sub-cmrra06_space-other_T2w_softseg_bin.json => sub-cmrra06_space-other_T2w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-cmrra06/anat/{sub-cmrra06_space-other_T2w_softseg_bin.nii.gz => sub-cmrra06_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-cmrra06/dwi/{sub-cmrra06_rec-average_dwi_softseg_bin.json => sub-cmrra06_rec-average_dwi_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-cmrra06/dwi/{sub-cmrra06_rec-average_dwi_softseg_bin.nii.gz => sub-cmrra06_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-cmrrb01/anat/{sub-cmrrb01_flip-1_mt-on_space-other_MTS_softseg_bin.json => sub-cmrrb01_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-cmrrb01/anat/{sub-cmrrb01_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz => sub-cmrrb01_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-cmrrb01/anat/{sub-cmrrb01_flip-2_mt-off_space-other_MTS_softseg_bin.json => sub-cmrrb01_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-cmrrb01/anat/{sub-cmrrb01_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz => sub-cmrrb01_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-cmrrb01/anat/{sub-cmrrb01_space-other_T1w_softseg_bin.json => sub-cmrrb01_space-other_T1w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-cmrrb01/anat/{sub-cmrrb01_space-other_T1w_softseg_bin.nii.gz => sub-cmrrb01_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-cmrrb01/anat/{sub-cmrrb01_space-other_T2star_softseg_bin.json => sub-cmrrb01_space-other_T2star_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-cmrrb01/anat/{sub-cmrrb01_space-other_T2star_softseg_bin.nii.gz => sub-cmrrb01_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-cmrrb01/anat/{sub-cmrrb01_space-other_T2w_softseg_bin.json => sub-cmrrb01_space-other_T2w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-cmrrb01/anat/{sub-cmrrb01_space-other_T2w_softseg_bin.nii.gz => sub-cmrrb01_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-cmrrb01/dwi/{sub-cmrrb01_rec-average_dwi_softseg_bin.json => sub-cmrrb01_rec-average_dwi_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-cmrrb01/dwi/{sub-cmrrb01_rec-average_dwi_softseg_bin.nii.gz => sub-cmrrb01_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-cmrrb02/anat/{sub-cmrrb02_flip-1_mt-on_space-other_MTS_softseg_bin.json => sub-cmrrb02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-cmrrb02/anat/{sub-cmrrb02_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz => sub-cmrrb02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-cmrrb02/anat/{sub-cmrrb02_flip-2_mt-off_space-other_MTS_softseg_bin.json => sub-cmrrb02_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-cmrrb02/anat/{sub-cmrrb02_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz => sub-cmrrb02_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-cmrrb02/anat/{sub-cmrrb02_space-other_T1w_softseg_bin.json => sub-cmrrb02_space-other_T1w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-cmrrb02/anat/{sub-cmrrb02_space-other_T1w_softseg_bin.nii.gz => sub-cmrrb02_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-cmrrb02/anat/{sub-cmrrb02_space-other_T2star_softseg_bin.json => sub-cmrrb02_space-other_T2star_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-cmrrb02/anat/{sub-cmrrb02_space-other_T2star_softseg_bin.nii.gz => sub-cmrrb02_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-cmrrb02/anat/{sub-cmrrb02_space-other_T2w_softseg_bin.json => sub-cmrrb02_space-other_T2w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-cmrrb02/anat/{sub-cmrrb02_space-other_T2w_softseg_bin.nii.gz => sub-cmrrb02_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-cmrrb02/dwi/{sub-cmrrb02_rec-average_dwi_softseg_bin.json => sub-cmrrb02_rec-average_dwi_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-cmrrb02/dwi/{sub-cmrrb02_rec-average_dwi_softseg_bin.nii.gz => sub-cmrrb02_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-cmrrb03/anat/{sub-cmrrb03_flip-1_mt-on_space-other_MTS_softseg_bin.json => sub-cmrrb03_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-cmrrb03/anat/{sub-cmrrb03_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz => sub-cmrrb03_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-cmrrb03/anat/{sub-cmrrb03_flip-2_mt-off_space-other_MTS_softseg_bin.json => sub-cmrrb03_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-cmrrb03/anat/{sub-cmrrb03_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz => sub-cmrrb03_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-cmrrb03/anat/{sub-cmrrb03_space-other_T1w_softseg_bin.json => sub-cmrrb03_space-other_T1w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-cmrrb03/anat/{sub-cmrrb03_space-other_T1w_softseg_bin.nii.gz => sub-cmrrb03_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-cmrrb03/anat/{sub-cmrrb03_space-other_T2star_softseg_bin.json => sub-cmrrb03_space-other_T2star_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-cmrrb03/anat/{sub-cmrrb03_space-other_T2star_softseg_bin.nii.gz => sub-cmrrb03_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-cmrrb03/anat/{sub-cmrrb03_space-other_T2w_softseg_bin.json => sub-cmrrb03_space-other_T2w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-cmrrb03/anat/{sub-cmrrb03_space-other_T2w_softseg_bin.nii.gz => sub-cmrrb03_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-cmrrb03/dwi/{sub-cmrrb03_rec-average_dwi_softseg_bin.json => sub-cmrrb03_rec-average_dwi_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-cmrrb03/dwi/{sub-cmrrb03_rec-average_dwi_softseg_bin.nii.gz => sub-cmrrb03_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-cmrrb04/anat/{sub-cmrrb04_flip-1_mt-on_space-other_MTS_softseg_bin.json => sub-cmrrb04_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-cmrrb04/anat/{sub-cmrrb04_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz => sub-cmrrb04_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-cmrrb04/anat/{sub-cmrrb04_flip-2_mt-off_space-other_MTS_softseg_bin.json => sub-cmrrb04_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-cmrrb04/anat/{sub-cmrrb04_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz => sub-cmrrb04_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-cmrrb04/anat/{sub-cmrrb04_space-other_T1w_softseg_bin.json => sub-cmrrb04_space-other_T1w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-cmrrb04/anat/{sub-cmrrb04_space-other_T1w_softseg_bin.nii.gz => sub-cmrrb04_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-cmrrb04/anat/{sub-cmrrb04_space-other_T2star_softseg_bin.json => sub-cmrrb04_space-other_T2star_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-cmrrb04/anat/{sub-cmrrb04_space-other_T2star_softseg_bin.nii.gz => sub-cmrrb04_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-cmrrb04/anat/{sub-cmrrb04_space-other_T2w_softseg_bin.json => sub-cmrrb04_space-other_T2w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-cmrrb04/anat/{sub-cmrrb04_space-other_T2w_softseg_bin.nii.gz => sub-cmrrb04_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-cmrrb04/dwi/{sub-cmrrb04_rec-average_dwi_softseg_bin.json => sub-cmrrb04_rec-average_dwi_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-cmrrb04/dwi/{sub-cmrrb04_rec-average_dwi_softseg_bin.nii.gz => sub-cmrrb04_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-cmrrb05/anat/{sub-cmrrb05_flip-1_mt-on_space-other_MTS_softseg_bin.json => sub-cmrrb05_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-cmrrb05/anat/{sub-cmrrb05_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz => sub-cmrrb05_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-cmrrb05/anat/{sub-cmrrb05_flip-2_mt-off_space-other_MTS_softseg_bin.json => sub-cmrrb05_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-cmrrb05/anat/{sub-cmrrb05_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz => sub-cmrrb05_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-cmrrb05/anat/{sub-cmrrb05_space-other_T1w_softseg_bin.json => sub-cmrrb05_space-other_T1w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-cmrrb05/anat/{sub-cmrrb05_space-other_T1w_softseg_bin.nii.gz => sub-cmrrb05_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-cmrrb05/anat/{sub-cmrrb05_space-other_T2star_softseg_bin.json => sub-cmrrb05_space-other_T2star_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-cmrrb05/anat/{sub-cmrrb05_space-other_T2star_softseg_bin.nii.gz => sub-cmrrb05_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-cmrrb05/anat/{sub-cmrrb05_space-other_T2w_softseg_bin.json => sub-cmrrb05_space-other_T2w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-cmrrb05/anat/{sub-cmrrb05_space-other_T2w_softseg_bin.nii.gz => sub-cmrrb05_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-cmrrb05/dwi/{sub-cmrrb05_rec-average_dwi_softseg_bin.json => sub-cmrrb05_rec-average_dwi_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-cmrrb05/dwi/{sub-cmrrb05_rec-average_dwi_softseg_bin.nii.gz => sub-cmrrb05_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-cmrrb06/anat/{sub-cmrrb06_flip-1_mt-on_space-other_MTS_softseg_bin.json => sub-cmrrb06_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-cmrrb06/anat/{sub-cmrrb06_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz => sub-cmrrb06_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-cmrrb06/anat/{sub-cmrrb06_flip-2_mt-off_space-other_MTS_softseg_bin.json => sub-cmrrb06_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-cmrrb06/anat/{sub-cmrrb06_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz => sub-cmrrb06_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-cmrrb06/anat/{sub-cmrrb06_space-other_T1w_softseg_bin.json => sub-cmrrb06_space-other_T1w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-cmrrb06/anat/{sub-cmrrb06_space-other_T1w_softseg_bin.nii.gz => sub-cmrrb06_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-cmrrb06/anat/{sub-cmrrb06_space-other_T2star_softseg_bin.json => sub-cmrrb06_space-other_T2star_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-cmrrb06/anat/{sub-cmrrb06_space-other_T2star_softseg_bin.nii.gz => sub-cmrrb06_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-cmrrb06/anat/{sub-cmrrb06_space-other_T2w_softseg_bin.json => sub-cmrrb06_space-other_T2w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-cmrrb06/anat/{sub-cmrrb06_space-other_T2w_softseg_bin.nii.gz => sub-cmrrb06_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-cmrrb06/dwi/{sub-cmrrb06_rec-average_dwi_softseg_bin.json => sub-cmrrb06_rec-average_dwi_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-cmrrb06/dwi/{sub-cmrrb06_rec-average_dwi_softseg_bin.nii.gz => sub-cmrrb06_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-cmrrb07/anat/{sub-cmrrb07_flip-1_mt-on_space-other_MTS_softseg_bin.json => sub-cmrrb07_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-cmrrb07/anat/{sub-cmrrb07_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz => sub-cmrrb07_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-cmrrb07/anat/{sub-cmrrb07_flip-2_mt-off_space-other_MTS_softseg_bin.json => sub-cmrrb07_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-cmrrb07/anat/{sub-cmrrb07_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz => sub-cmrrb07_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-cmrrb07/anat/{sub-cmrrb07_space-other_T1w_softseg_bin.json => sub-cmrrb07_space-other_T1w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-cmrrb07/anat/{sub-cmrrb07_space-other_T1w_softseg_bin.nii.gz => sub-cmrrb07_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-cmrrb07/anat/{sub-cmrrb07_space-other_T2star_softseg_bin.json => sub-cmrrb07_space-other_T2star_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-cmrrb07/anat/{sub-cmrrb07_space-other_T2star_softseg_bin.nii.gz => sub-cmrrb07_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-cmrrb07/anat/{sub-cmrrb07_space-other_T2w_softseg_bin.json => sub-cmrrb07_space-other_T2w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-cmrrb07/anat/{sub-cmrrb07_space-other_T2w_softseg_bin.nii.gz => sub-cmrrb07_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-cmrrb07/dwi/{sub-cmrrb07_rec-average_dwi_softseg_bin.json => sub-cmrrb07_rec-average_dwi_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-cmrrb07/dwi/{sub-cmrrb07_rec-average_dwi_softseg_bin.nii.gz => sub-cmrrb07_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-dresden01/anat/{sub-dresden01_flip-1_mt-on_space-other_MTS_softseg_bin.json => sub-dresden01_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-dresden01/anat/{sub-dresden01_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz => sub-dresden01_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-dresden01/anat/{sub-dresden01_flip-2_mt-off_space-other_MTS_softseg_bin.json => sub-dresden01_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-dresden01/anat/{sub-dresden01_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz => sub-dresden01_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-dresden01/anat/{sub-dresden01_space-other_T1w_softseg_bin.json => sub-dresden01_space-other_T1w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-dresden01/anat/{sub-dresden01_space-other_T1w_softseg_bin.nii.gz => sub-dresden01_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-dresden01/anat/{sub-dresden01_space-other_T2star_softseg_bin.json => sub-dresden01_space-other_T2star_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-dresden01/anat/{sub-dresden01_space-other_T2star_softseg_bin.nii.gz => sub-dresden01_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-dresden01/anat/{sub-dresden01_space-other_T2w_softseg_bin.json => sub-dresden01_space-other_T2w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-dresden01/anat/{sub-dresden01_space-other_T2w_softseg_bin.nii.gz => sub-dresden01_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-dresden01/dwi/{sub-dresden01_rec-average_dwi_softseg_bin.json => sub-dresden01_rec-average_dwi_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-dresden01/dwi/{sub-dresden01_rec-average_dwi_softseg_bin.nii.gz => sub-dresden01_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-dresden02/anat/{sub-dresden02_flip-1_mt-on_space-other_MTS_softseg_bin.json => sub-dresden02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-dresden02/anat/{sub-dresden02_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz => sub-dresden02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-dresden02/anat/{sub-dresden02_flip-2_mt-off_space-other_MTS_softseg_bin.json => sub-dresden02_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-dresden02/anat/{sub-dresden02_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz => sub-dresden02_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-dresden02/anat/{sub-dresden02_space-other_T1w_softseg_bin.json => sub-dresden02_space-other_T1w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-dresden02/anat/{sub-dresden02_space-other_T1w_softseg_bin.nii.gz => sub-dresden02_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-dresden02/anat/{sub-dresden02_space-other_T2star_softseg_bin.json => sub-dresden02_space-other_T2star_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-dresden02/anat/{sub-dresden02_space-other_T2star_softseg_bin.nii.gz => sub-dresden02_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-dresden02/anat/{sub-dresden02_space-other_T2w_softseg_bin.json => sub-dresden02_space-other_T2w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-dresden02/anat/{sub-dresden02_space-other_T2w_softseg_bin.nii.gz => sub-dresden02_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-dresden02/dwi/{sub-dresden02_rec-average_dwi_softseg_bin.json => sub-dresden02_rec-average_dwi_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-dresden02/dwi/{sub-dresden02_rec-average_dwi_softseg_bin.nii.gz => sub-dresden02_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-fslAchieva01/anat/{sub-fslAchieva01_flip-1_mt-on_space-other_MTS_softseg_bin.json => sub-fslAchieva01_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-fslAchieva01/anat/{sub-fslAchieva01_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz => sub-fslAchieva01_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-fslAchieva01/anat/{sub-fslAchieva01_flip-2_mt-off_space-other_MTS_softseg_bin.json => sub-fslAchieva01_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-fslAchieva01/anat/{sub-fslAchieva01_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz => sub-fslAchieva01_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-fslAchieva01/anat/{sub-fslAchieva01_space-other_T1w_softseg_bin.json => sub-fslAchieva01_space-other_T1w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-fslAchieva01/anat/{sub-fslAchieva01_space-other_T1w_softseg_bin.nii.gz => sub-fslAchieva01_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-fslAchieva01/anat/{sub-fslAchieva01_space-other_T2star_softseg_bin.json => sub-fslAchieva01_space-other_T2star_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-fslAchieva01/anat/{sub-fslAchieva01_space-other_T2star_softseg_bin.nii.gz => sub-fslAchieva01_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-fslAchieva01/anat/{sub-fslAchieva01_space-other_T2w_softseg_bin.json => sub-fslAchieva01_space-other_T2w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-fslAchieva01/anat/{sub-fslAchieva01_space-other_T2w_softseg_bin.nii.gz => sub-fslAchieva01_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-fslAchieva01/dwi/{sub-fslAchieva01_rec-average_dwi_softseg_bin.json => sub-fslAchieva01_rec-average_dwi_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-fslAchieva01/dwi/{sub-fslAchieva01_rec-average_dwi_softseg_bin.nii.gz => sub-fslAchieva01_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-fslAchieva02/anat/{sub-fslAchieva02_flip-1_mt-on_space-other_MTS_softseg_bin.json => sub-fslAchieva02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-fslAchieva02/anat/{sub-fslAchieva02_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz => sub-fslAchieva02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-fslAchieva02/anat/{sub-fslAchieva02_flip-2_mt-off_space-other_MTS_softseg_bin.json => sub-fslAchieva02_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-fslAchieva02/anat/{sub-fslAchieva02_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz => sub-fslAchieva02_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-fslAchieva02/anat/{sub-fslAchieva02_space-other_T1w_softseg_bin.json => sub-fslAchieva02_space-other_T1w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-fslAchieva02/anat/{sub-fslAchieva02_space-other_T1w_softseg_bin.nii.gz => sub-fslAchieva02_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-fslAchieva02/anat/{sub-fslAchieva02_space-other_T2star_softseg_bin.json => sub-fslAchieva02_space-other_T2star_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-fslAchieva02/anat/{sub-fslAchieva02_space-other_T2star_softseg_bin.nii.gz => sub-fslAchieva02_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-fslAchieva02/anat/{sub-fslAchieva02_space-other_T2w_softseg_bin.json => sub-fslAchieva02_space-other_T2w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-fslAchieva02/anat/{sub-fslAchieva02_space-other_T2w_softseg_bin.nii.gz => sub-fslAchieva02_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-fslAchieva02/dwi/{sub-fslAchieva02_rec-average_dwi_softseg_bin.json => sub-fslAchieva02_rec-average_dwi_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-fslAchieva02/dwi/{sub-fslAchieva02_rec-average_dwi_softseg_bin.nii.gz => sub-fslAchieva02_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-fslAchieva03/anat/{sub-fslAchieva03_flip-1_mt-on_space-other_MTS_softseg_bin.json => sub-fslAchieva03_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-fslAchieva03/anat/{sub-fslAchieva03_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz => sub-fslAchieva03_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-fslAchieva03/anat/{sub-fslAchieva03_flip-2_mt-off_space-other_MTS_softseg_bin.json => sub-fslAchieva03_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-fslAchieva03/anat/{sub-fslAchieva03_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz => sub-fslAchieva03_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-fslAchieva03/anat/{sub-fslAchieva03_space-other_T1w_softseg_bin.json => sub-fslAchieva03_space-other_T1w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-fslAchieva03/anat/{sub-fslAchieva03_space-other_T1w_softseg_bin.nii.gz => sub-fslAchieva03_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-fslAchieva03/anat/{sub-fslAchieva03_space-other_T2star_softseg_bin.json => sub-fslAchieva03_space-other_T2star_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-fslAchieva03/anat/{sub-fslAchieva03_space-other_T2star_softseg_bin.nii.gz => sub-fslAchieva03_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-fslAchieva03/anat/{sub-fslAchieva03_space-other_T2w_softseg_bin.json => sub-fslAchieva03_space-other_T2w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-fslAchieva03/anat/{sub-fslAchieva03_space-other_T2w_softseg_bin.nii.gz => sub-fslAchieva03_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-fslAchieva03/dwi/{sub-fslAchieva03_rec-average_dwi_softseg_bin.json => sub-fslAchieva03_rec-average_dwi_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-fslAchieva03/dwi/{sub-fslAchieva03_rec-average_dwi_softseg_bin.nii.gz => sub-fslAchieva03_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-fslAchieva04/anat/{sub-fslAchieva04_flip-1_mt-on_space-other_MTS_softseg_bin.json => sub-fslAchieva04_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-fslAchieva04/anat/{sub-fslAchieva04_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz => sub-fslAchieva04_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-fslAchieva04/anat/{sub-fslAchieva04_flip-2_mt-off_space-other_MTS_softseg_bin.json => sub-fslAchieva04_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-fslAchieva04/anat/{sub-fslAchieva04_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz => sub-fslAchieva04_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-fslAchieva04/anat/{sub-fslAchieva04_space-other_T1w_softseg_bin.json => sub-fslAchieva04_space-other_T1w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-fslAchieva04/anat/{sub-fslAchieva04_space-other_T1w_softseg_bin.nii.gz => sub-fslAchieva04_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-fslAchieva04/anat/{sub-fslAchieva04_space-other_T2star_softseg_bin.json => sub-fslAchieva04_space-other_T2star_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-fslAchieva04/anat/{sub-fslAchieva04_space-other_T2star_softseg_bin.nii.gz => sub-fslAchieva04_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-fslAchieva04/anat/{sub-fslAchieva04_space-other_T2w_softseg_bin.json => sub-fslAchieva04_space-other_T2w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-fslAchieva04/anat/{sub-fslAchieva04_space-other_T2w_softseg_bin.nii.gz => sub-fslAchieva04_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-fslAchieva04/dwi/{sub-fslAchieva04_rec-average_dwi_softseg_bin.json => sub-fslAchieva04_rec-average_dwi_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-fslAchieva04/dwi/{sub-fslAchieva04_rec-average_dwi_softseg_bin.nii.gz => sub-fslAchieva04_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-fslAchieva05/anat/{sub-fslAchieva05_flip-1_mt-on_space-other_MTS_softseg_bin.json => sub-fslAchieva05_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-fslAchieva05/anat/{sub-fslAchieva05_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz => sub-fslAchieva05_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-fslAchieva05/anat/{sub-fslAchieva05_flip-2_mt-off_space-other_MTS_softseg_bin.json => sub-fslAchieva05_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-fslAchieva05/anat/{sub-fslAchieva05_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz => sub-fslAchieva05_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-fslAchieva05/anat/{sub-fslAchieva05_space-other_T1w_softseg_bin.json => sub-fslAchieva05_space-other_T1w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-fslAchieva05/anat/{sub-fslAchieva05_space-other_T1w_softseg_bin.nii.gz => sub-fslAchieva05_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-fslAchieva05/anat/{sub-fslAchieva05_space-other_T2star_softseg_bin.json => sub-fslAchieva05_space-other_T2star_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-fslAchieva05/anat/{sub-fslAchieva05_space-other_T2star_softseg_bin.nii.gz => sub-fslAchieva05_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-fslAchieva05/anat/{sub-fslAchieva05_space-other_T2w_softseg_bin.json => sub-fslAchieva05_space-other_T2w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-fslAchieva05/anat/{sub-fslAchieva05_space-other_T2w_softseg_bin.nii.gz => sub-fslAchieva05_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-fslAchieva05/dwi/{sub-fslAchieva05_rec-average_dwi_softseg_bin.json => sub-fslAchieva05_rec-average_dwi_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-fslAchieva05/dwi/{sub-fslAchieva05_rec-average_dwi_softseg_bin.nii.gz => sub-fslAchieva05_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-fslAchieva06/anat/{sub-fslAchieva06_flip-1_mt-on_space-other_MTS_softseg_bin.json => sub-fslAchieva06_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-fslAchieva06/anat/{sub-fslAchieva06_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz => sub-fslAchieva06_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-fslAchieva06/anat/{sub-fslAchieva06_flip-2_mt-off_space-other_MTS_softseg_bin.json => sub-fslAchieva06_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-fslAchieva06/anat/{sub-fslAchieva06_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz => sub-fslAchieva06_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-fslAchieva06/anat/{sub-fslAchieva06_space-other_T1w_softseg_bin.json => sub-fslAchieva06_space-other_T1w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-fslAchieva06/anat/{sub-fslAchieva06_space-other_T1w_softseg_bin.nii.gz => sub-fslAchieva06_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-fslAchieva06/anat/{sub-fslAchieva06_space-other_T2star_softseg_bin.json => sub-fslAchieva06_space-other_T2star_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-fslAchieva06/anat/{sub-fslAchieva06_space-other_T2star_softseg_bin.nii.gz => sub-fslAchieva06_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-fslAchieva06/anat/{sub-fslAchieva06_space-other_T2w_softseg_bin.json => sub-fslAchieva06_space-other_T2w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-fslAchieva06/anat/{sub-fslAchieva06_space-other_T2w_softseg_bin.nii.gz => sub-fslAchieva06_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-fslAchieva06/dwi/{sub-fslAchieva06_rec-average_dwi_softseg_bin.json => sub-fslAchieva06_rec-average_dwi_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-fslAchieva06/dwi/{sub-fslAchieva06_rec-average_dwi_softseg_bin.nii.gz => sub-fslAchieva06_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-fslPrisma01/anat/{sub-fslPrisma01_flip-1_mt-on_space-other_MTS_softseg_bin.json => sub-fslPrisma01_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-fslPrisma01/anat/{sub-fslPrisma01_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz => sub-fslPrisma01_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-fslPrisma01/anat/{sub-fslPrisma01_flip-2_mt-off_space-other_MTS_softseg_bin.json => sub-fslPrisma01_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-fslPrisma01/anat/{sub-fslPrisma01_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz => sub-fslPrisma01_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-fslPrisma01/anat/{sub-fslPrisma01_space-other_T1w_softseg_bin.json => sub-fslPrisma01_space-other_T1w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-fslPrisma01/anat/{sub-fslPrisma01_space-other_T1w_softseg_bin.nii.gz => sub-fslPrisma01_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-fslPrisma01/anat/{sub-fslPrisma01_space-other_T2star_softseg_bin.json => sub-fslPrisma01_space-other_T2star_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-fslPrisma01/anat/{sub-fslPrisma01_space-other_T2star_softseg_bin.nii.gz => sub-fslPrisma01_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-fslPrisma01/anat/{sub-fslPrisma01_space-other_T2w_softseg_bin.json => sub-fslPrisma01_space-other_T2w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-fslPrisma01/anat/{sub-fslPrisma01_space-other_T2w_softseg_bin.nii.gz => sub-fslPrisma01_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-fslPrisma01/dwi/{sub-fslPrisma01_rec-average_dwi_softseg_bin.json => sub-fslPrisma01_rec-average_dwi_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-fslPrisma01/dwi/{sub-fslPrisma01_rec-average_dwi_softseg_bin.nii.gz => sub-fslPrisma01_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-fslPrisma02/anat/{sub-fslPrisma02_flip-1_mt-on_space-other_MTS_softseg_bin.json => sub-fslPrisma02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-fslPrisma02/anat/{sub-fslPrisma02_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz => sub-fslPrisma02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-fslPrisma02/anat/{sub-fslPrisma02_flip-2_mt-off_space-other_MTS_softseg_bin.json => sub-fslPrisma02_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-fslPrisma02/anat/{sub-fslPrisma02_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz => sub-fslPrisma02_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-fslPrisma02/anat/{sub-fslPrisma02_space-other_T1w_softseg_bin.json => sub-fslPrisma02_space-other_T1w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-fslPrisma02/anat/{sub-fslPrisma02_space-other_T1w_softseg_bin.nii.gz => sub-fslPrisma02_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-fslPrisma02/anat/{sub-fslPrisma02_space-other_T2star_softseg_bin.json => sub-fslPrisma02_space-other_T2star_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-fslPrisma02/anat/{sub-fslPrisma02_space-other_T2star_softseg_bin.nii.gz => sub-fslPrisma02_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-fslPrisma02/anat/{sub-fslPrisma02_space-other_T2w_softseg_bin.json => sub-fslPrisma02_space-other_T2w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-fslPrisma02/anat/{sub-fslPrisma02_space-other_T2w_softseg_bin.nii.gz => sub-fslPrisma02_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-fslPrisma02/dwi/{sub-fslPrisma02_rec-average_dwi_softseg_bin.json => sub-fslPrisma02_rec-average_dwi_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-fslPrisma02/dwi/{sub-fslPrisma02_rec-average_dwi_softseg_bin.nii.gz => sub-fslPrisma02_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-fslPrisma03/anat/{sub-fslPrisma03_flip-1_mt-on_space-other_MTS_softseg_bin.json => sub-fslPrisma03_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-fslPrisma03/anat/{sub-fslPrisma03_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz => sub-fslPrisma03_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-fslPrisma03/anat/{sub-fslPrisma03_flip-2_mt-off_space-other_MTS_softseg_bin.json => sub-fslPrisma03_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-fslPrisma03/anat/{sub-fslPrisma03_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz => sub-fslPrisma03_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-fslPrisma03/anat/{sub-fslPrisma03_space-other_T1w_softseg_bin.json => sub-fslPrisma03_space-other_T1w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-fslPrisma03/anat/{sub-fslPrisma03_space-other_T1w_softseg_bin.nii.gz => sub-fslPrisma03_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-fslPrisma03/anat/{sub-fslPrisma03_space-other_T2star_softseg_bin.json => sub-fslPrisma03_space-other_T2star_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-fslPrisma03/anat/{sub-fslPrisma03_space-other_T2star_softseg_bin.nii.gz => sub-fslPrisma03_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-fslPrisma03/anat/{sub-fslPrisma03_space-other_T2w_softseg_bin.json => sub-fslPrisma03_space-other_T2w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-fslPrisma03/anat/{sub-fslPrisma03_space-other_T2w_softseg_bin.nii.gz => sub-fslPrisma03_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-fslPrisma03/dwi/{sub-fslPrisma03_rec-average_dwi_softseg_bin.json => sub-fslPrisma03_rec-average_dwi_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-fslPrisma03/dwi/{sub-fslPrisma03_rec-average_dwi_softseg_bin.nii.gz => sub-fslPrisma03_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-fslPrisma04/anat/{sub-fslPrisma04_flip-1_mt-on_space-other_MTS_softseg_bin.json => sub-fslPrisma04_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-fslPrisma04/anat/{sub-fslPrisma04_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz => sub-fslPrisma04_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-fslPrisma04/anat/{sub-fslPrisma04_flip-2_mt-off_space-other_MTS_softseg_bin.json => sub-fslPrisma04_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-fslPrisma04/anat/{sub-fslPrisma04_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz => sub-fslPrisma04_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-fslPrisma04/anat/{sub-fslPrisma04_space-other_T1w_softseg_bin.json => sub-fslPrisma04_space-other_T1w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-fslPrisma04/anat/{sub-fslPrisma04_space-other_T1w_softseg_bin.nii.gz => sub-fslPrisma04_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-fslPrisma04/anat/{sub-fslPrisma04_space-other_T2star_softseg_bin.json => sub-fslPrisma04_space-other_T2star_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-fslPrisma04/anat/{sub-fslPrisma04_space-other_T2star_softseg_bin.nii.gz => sub-fslPrisma04_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-fslPrisma04/anat/{sub-fslPrisma04_space-other_T2w_softseg_bin.json => sub-fslPrisma04_space-other_T2w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-fslPrisma04/anat/{sub-fslPrisma04_space-other_T2w_softseg_bin.nii.gz => sub-fslPrisma04_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-fslPrisma04/dwi/{sub-fslPrisma04_rec-average_dwi_softseg_bin.json => sub-fslPrisma04_rec-average_dwi_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-fslPrisma04/dwi/{sub-fslPrisma04_rec-average_dwi_softseg_bin.nii.gz => sub-fslPrisma04_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-fslPrisma05/anat/{sub-fslPrisma05_flip-1_mt-on_space-other_MTS_softseg_bin.json => sub-fslPrisma05_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-fslPrisma05/anat/{sub-fslPrisma05_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz => sub-fslPrisma05_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-fslPrisma05/anat/{sub-fslPrisma05_flip-2_mt-off_space-other_MTS_softseg_bin.json => sub-fslPrisma05_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-fslPrisma05/anat/{sub-fslPrisma05_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz => sub-fslPrisma05_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-fslPrisma05/anat/{sub-fslPrisma05_space-other_T1w_softseg_bin.json => sub-fslPrisma05_space-other_T1w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-fslPrisma05/anat/{sub-fslPrisma05_space-other_T1w_softseg_bin.nii.gz => sub-fslPrisma05_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-fslPrisma05/anat/{sub-fslPrisma05_space-other_T2star_softseg_bin.json => sub-fslPrisma05_space-other_T2star_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-fslPrisma05/anat/{sub-fslPrisma05_space-other_T2star_softseg_bin.nii.gz => sub-fslPrisma05_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-fslPrisma05/anat/{sub-fslPrisma05_space-other_T2w_softseg_bin.json => sub-fslPrisma05_space-other_T2w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-fslPrisma05/anat/{sub-fslPrisma05_space-other_T2w_softseg_bin.nii.gz => sub-fslPrisma05_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-fslPrisma05/dwi/{sub-fslPrisma05_rec-average_dwi_softseg_bin.json => sub-fslPrisma05_rec-average_dwi_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-fslPrisma05/dwi/{sub-fslPrisma05_rec-average_dwi_softseg_bin.nii.gz => sub-fslPrisma05_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-fslPrisma06/anat/{sub-fslPrisma06_flip-1_mt-on_space-other_MTS_softseg_bin.json => sub-fslPrisma06_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-fslPrisma06/anat/{sub-fslPrisma06_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz => sub-fslPrisma06_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-fslPrisma06/anat/{sub-fslPrisma06_flip-2_mt-off_space-other_MTS_softseg_bin.json => sub-fslPrisma06_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-fslPrisma06/anat/{sub-fslPrisma06_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz => sub-fslPrisma06_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-fslPrisma06/anat/{sub-fslPrisma06_space-other_T1w_softseg_bin.json => sub-fslPrisma06_space-other_T1w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-fslPrisma06/anat/{sub-fslPrisma06_space-other_T1w_softseg_bin.nii.gz => sub-fslPrisma06_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-fslPrisma06/anat/{sub-fslPrisma06_space-other_T2star_softseg_bin.json => sub-fslPrisma06_space-other_T2star_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-fslPrisma06/anat/{sub-fslPrisma06_space-other_T2star_softseg_bin.nii.gz => sub-fslPrisma06_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-fslPrisma06/anat/{sub-fslPrisma06_space-other_T2w_softseg_bin.json => sub-fslPrisma06_space-other_T2w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-fslPrisma06/anat/{sub-fslPrisma06_space-other_T2w_softseg_bin.nii.gz => sub-fslPrisma06_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-fslPrisma06/dwi/{sub-fslPrisma06_rec-average_dwi_softseg_bin.json => sub-fslPrisma06_rec-average_dwi_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-fslPrisma06/dwi/{sub-fslPrisma06_rec-average_dwi_softseg_bin.nii.gz => sub-fslPrisma06_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-geneva01/anat/{sub-geneva01_flip-1_mt-on_space-other_MTS_softseg_bin.json => sub-geneva01_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-geneva01/anat/{sub-geneva01_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz => sub-geneva01_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-geneva01/anat/{sub-geneva01_flip-2_mt-off_space-other_MTS_softseg_bin.json => sub-geneva01_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-geneva01/anat/{sub-geneva01_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz => sub-geneva01_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-geneva01/anat/{sub-geneva01_space-other_T1w_softseg_bin.json => sub-geneva01_space-other_T1w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-geneva01/anat/{sub-geneva01_space-other_T1w_softseg_bin.nii.gz => sub-geneva01_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-geneva01/anat/{sub-geneva01_space-other_T2star_softseg_bin.json => sub-geneva01_space-other_T2star_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-geneva01/anat/{sub-geneva01_space-other_T2star_softseg_bin.nii.gz => sub-geneva01_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-geneva01/anat/{sub-geneva01_space-other_T2w_softseg_bin.json => sub-geneva01_space-other_T2w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-geneva01/anat/{sub-geneva01_space-other_T2w_softseg_bin.nii.gz => sub-geneva01_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-geneva01/dwi/{sub-geneva01_rec-average_dwi_softseg_bin.json => sub-geneva01_rec-average_dwi_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-geneva01/dwi/{sub-geneva01_rec-average_dwi_softseg_bin.nii.gz => sub-geneva01_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-geneva02/anat/{sub-geneva02_flip-1_mt-on_space-other_MTS_softseg_bin.json => sub-geneva02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-geneva02/anat/{sub-geneva02_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz => sub-geneva02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-geneva02/anat/{sub-geneva02_flip-2_mt-off_space-other_MTS_softseg_bin.json => sub-geneva02_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-geneva02/anat/{sub-geneva02_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz => sub-geneva02_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-geneva02/anat/{sub-geneva02_space-other_T1w_softseg_bin.json => sub-geneva02_space-other_T1w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-geneva02/anat/{sub-geneva02_space-other_T1w_softseg_bin.nii.gz => sub-geneva02_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-geneva02/anat/{sub-geneva02_space-other_T2star_softseg_bin.json => sub-geneva02_space-other_T2star_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-geneva02/anat/{sub-geneva02_space-other_T2star_softseg_bin.nii.gz => sub-geneva02_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-geneva02/anat/{sub-geneva02_space-other_T2w_softseg_bin.json => sub-geneva02_space-other_T2w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-geneva02/anat/{sub-geneva02_space-other_T2w_softseg_bin.nii.gz => sub-geneva02_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-geneva02/dwi/{sub-geneva02_rec-average_dwi_softseg_bin.json => sub-geneva02_rec-average_dwi_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-geneva02/dwi/{sub-geneva02_rec-average_dwi_softseg_bin.nii.gz => sub-geneva02_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-geneva03/anat/{sub-geneva03_flip-1_mt-on_space-other_MTS_softseg_bin.json => sub-geneva03_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-geneva03/anat/{sub-geneva03_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz => sub-geneva03_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-geneva03/anat/{sub-geneva03_flip-2_mt-off_space-other_MTS_softseg_bin.json => sub-geneva03_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-geneva03/anat/{sub-geneva03_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz => sub-geneva03_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-geneva03/anat/{sub-geneva03_space-other_T1w_softseg_bin.json => sub-geneva03_space-other_T1w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-geneva03/anat/{sub-geneva03_space-other_T1w_softseg_bin.nii.gz => sub-geneva03_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-geneva03/anat/{sub-geneva03_space-other_T2star_softseg_bin.json => sub-geneva03_space-other_T2star_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-geneva03/anat/{sub-geneva03_space-other_T2star_softseg_bin.nii.gz => sub-geneva03_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-geneva03/anat/{sub-geneva03_space-other_T2w_softseg_bin.json => sub-geneva03_space-other_T2w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-geneva03/anat/{sub-geneva03_space-other_T2w_softseg_bin.nii.gz => sub-geneva03_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-geneva03/dwi/{sub-geneva03_rec-average_dwi_softseg_bin.json => sub-geneva03_rec-average_dwi_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-geneva03/dwi/{sub-geneva03_rec-average_dwi_softseg_bin.nii.gz => sub-geneva03_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-geneva04/anat/{sub-geneva04_flip-1_mt-on_space-other_MTS_softseg_bin.json => sub-geneva04_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-geneva04/anat/{sub-geneva04_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz => sub-geneva04_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-geneva04/anat/{sub-geneva04_flip-2_mt-off_space-other_MTS_softseg_bin.json => sub-geneva04_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-geneva04/anat/{sub-geneva04_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz => sub-geneva04_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-geneva04/anat/{sub-geneva04_space-other_T1w_softseg_bin.json => sub-geneva04_space-other_T1w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-geneva04/anat/{sub-geneva04_space-other_T1w_softseg_bin.nii.gz => sub-geneva04_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-geneva04/anat/{sub-geneva04_space-other_T2star_softseg_bin.json => sub-geneva04_space-other_T2star_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-geneva04/anat/{sub-geneva04_space-other_T2star_softseg_bin.nii.gz => sub-geneva04_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-geneva04/anat/{sub-geneva04_space-other_T2w_softseg_bin.json => sub-geneva04_space-other_T2w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-geneva04/anat/{sub-geneva04_space-other_T2w_softseg_bin.nii.gz => sub-geneva04_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-geneva04/dwi/{sub-geneva04_rec-average_dwi_softseg_bin.json => sub-geneva04_rec-average_dwi_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-geneva04/dwi/{sub-geneva04_rec-average_dwi_softseg_bin.nii.gz => sub-geneva04_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-geneva05/anat/{sub-geneva05_flip-1_mt-on_space-other_MTS_softseg_bin.json => sub-geneva05_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-geneva05/anat/{sub-geneva05_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz => sub-geneva05_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-geneva05/anat/{sub-geneva05_flip-2_mt-off_space-other_MTS_softseg_bin.json => sub-geneva05_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-geneva05/anat/{sub-geneva05_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz => sub-geneva05_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-geneva05/anat/{sub-geneva05_space-other_T1w_softseg_bin.json => sub-geneva05_space-other_T1w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-geneva05/anat/{sub-geneva05_space-other_T1w_softseg_bin.nii.gz => sub-geneva05_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-geneva05/anat/{sub-geneva05_space-other_T2star_softseg_bin.json => sub-geneva05_space-other_T2star_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-geneva05/anat/{sub-geneva05_space-other_T2star_softseg_bin.nii.gz => sub-geneva05_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-geneva05/anat/{sub-geneva05_space-other_T2w_softseg_bin.json => sub-geneva05_space-other_T2w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-geneva05/anat/{sub-geneva05_space-other_T2w_softseg_bin.nii.gz => sub-geneva05_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-geneva05/dwi/{sub-geneva05_rec-average_dwi_softseg_bin.json => sub-geneva05_rec-average_dwi_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-geneva05/dwi/{sub-geneva05_rec-average_dwi_softseg_bin.nii.gz => sub-geneva05_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-geneva06/anat/{sub-geneva06_flip-1_mt-on_space-other_MTS_softseg_bin.json => sub-geneva06_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-geneva06/anat/{sub-geneva06_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz => sub-geneva06_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-geneva06/anat/{sub-geneva06_flip-2_mt-off_space-other_MTS_softseg_bin.json => sub-geneva06_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-geneva06/anat/{sub-geneva06_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz => sub-geneva06_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-geneva06/anat/{sub-geneva06_space-other_T1w_softseg_bin.json => sub-geneva06_space-other_T1w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-geneva06/anat/{sub-geneva06_space-other_T1w_softseg_bin.nii.gz => sub-geneva06_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-geneva06/anat/{sub-geneva06_space-other_T2star_softseg_bin.json => sub-geneva06_space-other_T2star_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-geneva06/anat/{sub-geneva06_space-other_T2star_softseg_bin.nii.gz => sub-geneva06_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-geneva06/anat/{sub-geneva06_space-other_T2w_softseg_bin.json => sub-geneva06_space-other_T2w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-geneva06/anat/{sub-geneva06_space-other_T2w_softseg_bin.nii.gz => sub-geneva06_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-geneva06/dwi/{sub-geneva06_rec-average_dwi_softseg_bin.json => sub-geneva06_rec-average_dwi_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-geneva06/dwi/{sub-geneva06_rec-average_dwi_softseg_bin.nii.gz => sub-geneva06_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-hamburg01/anat/{sub-hamburg01_flip-1_mt-on_space-other_MTS_softseg_bin.json => sub-hamburg01_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-hamburg01/anat/{sub-hamburg01_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz => sub-hamburg01_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-hamburg01/anat/{sub-hamburg01_flip-2_mt-off_space-other_MTS_softseg_bin.json => sub-hamburg01_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-hamburg01/anat/{sub-hamburg01_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz => sub-hamburg01_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-hamburg01/anat/{sub-hamburg01_space-other_T1w_softseg_bin.json => sub-hamburg01_space-other_T1w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-hamburg01/anat/{sub-hamburg01_space-other_T1w_softseg_bin.nii.gz => sub-hamburg01_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-hamburg01/anat/{sub-hamburg01_space-other_T2star_softseg_bin.json => sub-hamburg01_space-other_T2star_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-hamburg01/anat/{sub-hamburg01_space-other_T2star_softseg_bin.nii.gz => sub-hamburg01_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-hamburg01/anat/{sub-hamburg01_space-other_T2w_softseg_bin.json => sub-hamburg01_space-other_T2w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-hamburg01/anat/{sub-hamburg01_space-other_T2w_softseg_bin.nii.gz => sub-hamburg01_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-hamburg01/dwi/{sub-hamburg01_rec-average_dwi_softseg_bin.json => sub-hamburg01_rec-average_dwi_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-hamburg01/dwi/{sub-hamburg01_rec-average_dwi_softseg_bin.nii.gz => sub-hamburg01_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-hamburg02/anat/{sub-hamburg02_flip-1_mt-on_space-other_MTS_softseg_bin.json => sub-hamburg02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-hamburg02/anat/{sub-hamburg02_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz => sub-hamburg02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-hamburg02/anat/{sub-hamburg02_flip-2_mt-off_space-other_MTS_softseg_bin.json => sub-hamburg02_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-hamburg02/anat/{sub-hamburg02_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz => sub-hamburg02_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-hamburg02/anat/{sub-hamburg02_space-other_T1w_softseg_bin.json => sub-hamburg02_space-other_T1w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-hamburg02/anat/{sub-hamburg02_space-other_T1w_softseg_bin.nii.gz => sub-hamburg02_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-hamburg02/anat/{sub-hamburg02_space-other_T2star_softseg_bin.json => sub-hamburg02_space-other_T2star_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-hamburg02/anat/{sub-hamburg02_space-other_T2star_softseg_bin.nii.gz => sub-hamburg02_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-hamburg02/anat/{sub-hamburg02_space-other_T2w_softseg_bin.json => sub-hamburg02_space-other_T2w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-hamburg02/anat/{sub-hamburg02_space-other_T2w_softseg_bin.nii.gz => sub-hamburg02_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-hamburg02/dwi/{sub-hamburg02_rec-average_dwi_softseg_bin.json => sub-hamburg02_rec-average_dwi_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-hamburg02/dwi/{sub-hamburg02_rec-average_dwi_softseg_bin.nii.gz => sub-hamburg02_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-hamburg03/anat/{sub-hamburg03_flip-1_mt-on_space-other_MTS_softseg_bin.json => sub-hamburg03_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-hamburg03/anat/{sub-hamburg03_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz => sub-hamburg03_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-hamburg03/anat/{sub-hamburg03_flip-2_mt-off_space-other_MTS_softseg_bin.json => sub-hamburg03_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-hamburg03/anat/{sub-hamburg03_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz => sub-hamburg03_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-hamburg03/anat/{sub-hamburg03_space-other_T1w_softseg_bin.json => sub-hamburg03_space-other_T1w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-hamburg03/anat/{sub-hamburg03_space-other_T1w_softseg_bin.nii.gz => sub-hamburg03_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-hamburg03/anat/{sub-hamburg03_space-other_T2star_softseg_bin.json => sub-hamburg03_space-other_T2star_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-hamburg03/anat/{sub-hamburg03_space-other_T2star_softseg_bin.nii.gz => sub-hamburg03_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-hamburg03/anat/{sub-hamburg03_space-other_T2w_softseg_bin.json => sub-hamburg03_space-other_T2w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-hamburg03/anat/{sub-hamburg03_space-other_T2w_softseg_bin.nii.gz => sub-hamburg03_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-hamburg03/dwi/{sub-hamburg03_rec-average_dwi_softseg_bin.json => sub-hamburg03_rec-average_dwi_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-hamburg03/dwi/{sub-hamburg03_rec-average_dwi_softseg_bin.nii.gz => sub-hamburg03_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-hamburg04/anat/{sub-hamburg04_flip-1_mt-on_space-other_MTS_softseg_bin.json => sub-hamburg04_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-hamburg04/anat/{sub-hamburg04_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz => sub-hamburg04_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-hamburg04/anat/{sub-hamburg04_flip-2_mt-off_space-other_MTS_softseg_bin.json => sub-hamburg04_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-hamburg04/anat/{sub-hamburg04_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz => sub-hamburg04_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-hamburg04/anat/{sub-hamburg04_space-other_T1w_softseg_bin.json => sub-hamburg04_space-other_T1w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-hamburg04/anat/{sub-hamburg04_space-other_T1w_softseg_bin.nii.gz => sub-hamburg04_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-hamburg04/anat/{sub-hamburg04_space-other_T2star_softseg_bin.json => sub-hamburg04_space-other_T2star_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-hamburg04/anat/{sub-hamburg04_space-other_T2star_softseg_bin.nii.gz => sub-hamburg04_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-hamburg04/anat/{sub-hamburg04_space-other_T2w_softseg_bin.json => sub-hamburg04_space-other_T2w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-hamburg04/anat/{sub-hamburg04_space-other_T2w_softseg_bin.nii.gz => sub-hamburg04_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-hamburg04/dwi/{sub-hamburg04_rec-average_dwi_softseg_bin.json => sub-hamburg04_rec-average_dwi_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-hamburg04/dwi/{sub-hamburg04_rec-average_dwi_softseg_bin.nii.gz => sub-hamburg04_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-hamburg05/anat/{sub-hamburg05_flip-1_mt-on_space-other_MTS_softseg_bin.json => sub-hamburg05_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-hamburg05/anat/{sub-hamburg05_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz => sub-hamburg05_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-hamburg05/anat/{sub-hamburg05_flip-2_mt-off_space-other_MTS_softseg_bin.json => sub-hamburg05_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-hamburg05/anat/{sub-hamburg05_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz => sub-hamburg05_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-hamburg05/anat/{sub-hamburg05_space-other_T1w_softseg_bin.json => sub-hamburg05_space-other_T1w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-hamburg05/anat/{sub-hamburg05_space-other_T1w_softseg_bin.nii.gz => sub-hamburg05_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-hamburg05/anat/{sub-hamburg05_space-other_T2star_softseg_bin.json => sub-hamburg05_space-other_T2star_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-hamburg05/anat/{sub-hamburg05_space-other_T2star_softseg_bin.nii.gz => sub-hamburg05_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-hamburg05/anat/{sub-hamburg05_space-other_T2w_softseg_bin.json => sub-hamburg05_space-other_T2w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-hamburg05/anat/{sub-hamburg05_space-other_T2w_softseg_bin.nii.gz => sub-hamburg05_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-hamburg05/dwi/{sub-hamburg05_rec-average_dwi_softseg_bin.json => sub-hamburg05_rec-average_dwi_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-hamburg05/dwi/{sub-hamburg05_rec-average_dwi_softseg_bin.nii.gz => sub-hamburg05_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-hamburg06/anat/{sub-hamburg06_flip-1_mt-on_space-other_MTS_softseg_bin.json => sub-hamburg06_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-hamburg06/anat/{sub-hamburg06_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz => sub-hamburg06_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-hamburg06/anat/{sub-hamburg06_flip-2_mt-off_space-other_MTS_softseg_bin.json => sub-hamburg06_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-hamburg06/anat/{sub-hamburg06_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz => sub-hamburg06_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-hamburg06/anat/{sub-hamburg06_space-other_T1w_softseg_bin.json => sub-hamburg06_space-other_T1w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-hamburg06/anat/{sub-hamburg06_space-other_T1w_softseg_bin.nii.gz => sub-hamburg06_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-hamburg06/anat/{sub-hamburg06_space-other_T2star_softseg_bin.json => sub-hamburg06_space-other_T2star_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-hamburg06/anat/{sub-hamburg06_space-other_T2star_softseg_bin.nii.gz => sub-hamburg06_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-hamburg06/anat/{sub-hamburg06_space-other_T2w_softseg_bin.json => sub-hamburg06_space-other_T2w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-hamburg06/anat/{sub-hamburg06_space-other_T2w_softseg_bin.nii.gz => sub-hamburg06_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-hamburg06/dwi/{sub-hamburg06_rec-average_dwi_softseg_bin.json => sub-hamburg06_rec-average_dwi_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-hamburg06/dwi/{sub-hamburg06_rec-average_dwi_softseg_bin.nii.gz => sub-hamburg06_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-juntendo750w01/anat/{sub-juntendo750w01_flip-1_mt-on_space-other_MTS_softseg_bin.json => sub-juntendo750w01_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-juntendo750w01/anat/{sub-juntendo750w01_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz => sub-juntendo750w01_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-juntendo750w01/anat/{sub-juntendo750w01_flip-2_mt-off_space-other_MTS_softseg_bin.json => sub-juntendo750w01_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-juntendo750w01/anat/{sub-juntendo750w01_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz => sub-juntendo750w01_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-juntendo750w01/anat/{sub-juntendo750w01_space-other_T1w_softseg_bin.json => sub-juntendo750w01_space-other_T1w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-juntendo750w01/anat/{sub-juntendo750w01_space-other_T1w_softseg_bin.nii.gz => sub-juntendo750w01_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-juntendo750w01/anat/{sub-juntendo750w01_space-other_T2star_softseg_bin.json => sub-juntendo750w01_space-other_T2star_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-juntendo750w01/anat/{sub-juntendo750w01_space-other_T2star_softseg_bin.nii.gz => sub-juntendo750w01_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-juntendo750w01/anat/{sub-juntendo750w01_space-other_T2w_softseg_bin.json => sub-juntendo750w01_space-other_T2w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-juntendo750w01/anat/{sub-juntendo750w01_space-other_T2w_softseg_bin.nii.gz => sub-juntendo750w01_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-juntendo750w01/dwi/{sub-juntendo750w01_rec-average_dwi_softseg_bin.json => sub-juntendo750w01_rec-average_dwi_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-juntendo750w01/dwi/{sub-juntendo750w01_rec-average_dwi_softseg_bin.nii.gz => sub-juntendo750w01_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-juntendo750w02/anat/{sub-juntendo750w02_flip-1_mt-on_space-other_MTS_softseg_bin.json => sub-juntendo750w02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-juntendo750w02/anat/{sub-juntendo750w02_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz => sub-juntendo750w02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-juntendo750w02/anat/{sub-juntendo750w02_flip-2_mt-off_space-other_MTS_softseg_bin.json => sub-juntendo750w02_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-juntendo750w02/anat/{sub-juntendo750w02_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz => sub-juntendo750w02_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-juntendo750w02/anat/{sub-juntendo750w02_space-other_T1w_softseg_bin.json => sub-juntendo750w02_space-other_T1w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-juntendo750w02/anat/{sub-juntendo750w02_space-other_T1w_softseg_bin.nii.gz => sub-juntendo750w02_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-juntendo750w02/anat/{sub-juntendo750w02_space-other_T2star_softseg_bin.json => sub-juntendo750w02_space-other_T2star_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-juntendo750w02/anat/{sub-juntendo750w02_space-other_T2star_softseg_bin.nii.gz => sub-juntendo750w02_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-juntendo750w02/anat/{sub-juntendo750w02_space-other_T2w_softseg_bin.json => sub-juntendo750w02_space-other_T2w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-juntendo750w02/anat/{sub-juntendo750w02_space-other_T2w_softseg_bin.nii.gz => sub-juntendo750w02_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-juntendo750w02/dwi/{sub-juntendo750w02_rec-average_dwi_softseg_bin.json => sub-juntendo750w02_rec-average_dwi_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-juntendo750w02/dwi/{sub-juntendo750w02_rec-average_dwi_softseg_bin.nii.gz => sub-juntendo750w02_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-juntendo750w03/anat/{sub-juntendo750w03_flip-1_mt-on_space-other_MTS_softseg_bin.json => sub-juntendo750w03_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-juntendo750w03/anat/{sub-juntendo750w03_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz => sub-juntendo750w03_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-juntendo750w03/anat/{sub-juntendo750w03_flip-2_mt-off_space-other_MTS_softseg_bin.json => sub-juntendo750w03_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-juntendo750w03/anat/{sub-juntendo750w03_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz => sub-juntendo750w03_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-juntendo750w03/anat/{sub-juntendo750w03_space-other_T1w_softseg_bin.json => sub-juntendo750w03_space-other_T1w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-juntendo750w03/anat/{sub-juntendo750w03_space-other_T1w_softseg_bin.nii.gz => sub-juntendo750w03_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-juntendo750w03/anat/{sub-juntendo750w03_space-other_T2star_softseg_bin.json => sub-juntendo750w03_space-other_T2star_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-juntendo750w03/anat/{sub-juntendo750w03_space-other_T2star_softseg_bin.nii.gz => sub-juntendo750w03_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-juntendo750w03/anat/{sub-juntendo750w03_space-other_T2w_softseg_bin.json => sub-juntendo750w03_space-other_T2w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-juntendo750w03/anat/{sub-juntendo750w03_space-other_T2w_softseg_bin.nii.gz => sub-juntendo750w03_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-juntendo750w03/dwi/{sub-juntendo750w03_rec-average_dwi_softseg_bin.json => sub-juntendo750w03_rec-average_dwi_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-juntendo750w03/dwi/{sub-juntendo750w03_rec-average_dwi_softseg_bin.nii.gz => sub-juntendo750w03_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-juntendo750w04/anat/{sub-juntendo750w04_flip-1_mt-on_space-other_MTS_softseg_bin.json => sub-juntendo750w04_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-juntendo750w04/anat/{sub-juntendo750w04_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz => sub-juntendo750w04_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-juntendo750w04/anat/{sub-juntendo750w04_flip-2_mt-off_space-other_MTS_softseg_bin.json => sub-juntendo750w04_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-juntendo750w04/anat/{sub-juntendo750w04_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz => sub-juntendo750w04_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-juntendo750w04/anat/{sub-juntendo750w04_space-other_T1w_softseg_bin.json => sub-juntendo750w04_space-other_T1w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-juntendo750w04/anat/{sub-juntendo750w04_space-other_T1w_softseg_bin.nii.gz => sub-juntendo750w04_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-juntendo750w04/anat/{sub-juntendo750w04_space-other_T2star_softseg_bin.json => sub-juntendo750w04_space-other_T2star_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-juntendo750w04/anat/{sub-juntendo750w04_space-other_T2star_softseg_bin.nii.gz => sub-juntendo750w04_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-juntendo750w04/anat/{sub-juntendo750w04_space-other_T2w_softseg_bin.json => sub-juntendo750w04_space-other_T2w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-juntendo750w04/anat/{sub-juntendo750w04_space-other_T2w_softseg_bin.nii.gz => sub-juntendo750w04_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-juntendo750w04/dwi/{sub-juntendo750w04_rec-average_dwi_softseg_bin.json => sub-juntendo750w04_rec-average_dwi_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-juntendo750w04/dwi/{sub-juntendo750w04_rec-average_dwi_softseg_bin.nii.gz => sub-juntendo750w04_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-juntendo750w05/anat/{sub-juntendo750w05_flip-1_mt-on_space-other_MTS_softseg_bin.json => sub-juntendo750w05_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-juntendo750w05/anat/{sub-juntendo750w05_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz => sub-juntendo750w05_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-juntendo750w05/anat/{sub-juntendo750w05_flip-2_mt-off_space-other_MTS_softseg_bin.json => sub-juntendo750w05_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-juntendo750w05/anat/{sub-juntendo750w05_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz => sub-juntendo750w05_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-juntendo750w05/anat/{sub-juntendo750w05_space-other_T1w_softseg_bin.json => sub-juntendo750w05_space-other_T1w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-juntendo750w05/anat/{sub-juntendo750w05_space-other_T1w_softseg_bin.nii.gz => sub-juntendo750w05_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-juntendo750w05/anat/{sub-juntendo750w05_space-other_T2star_softseg_bin.json => sub-juntendo750w05_space-other_T2star_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-juntendo750w05/anat/{sub-juntendo750w05_space-other_T2star_softseg_bin.nii.gz => sub-juntendo750w05_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-juntendo750w05/anat/{sub-juntendo750w05_space-other_T2w_softseg_bin.json => sub-juntendo750w05_space-other_T2w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-juntendo750w05/anat/{sub-juntendo750w05_space-other_T2w_softseg_bin.nii.gz => sub-juntendo750w05_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-juntendo750w05/dwi/{sub-juntendo750w05_rec-average_dwi_softseg_bin.json => sub-juntendo750w05_rec-average_dwi_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-juntendo750w05/dwi/{sub-juntendo750w05_rec-average_dwi_softseg_bin.nii.gz => sub-juntendo750w05_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-juntendo750w06/anat/{sub-juntendo750w06_flip-1_mt-on_space-other_MTS_softseg_bin.json => sub-juntendo750w06_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-juntendo750w06/anat/{sub-juntendo750w06_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz => sub-juntendo750w06_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-juntendo750w06/anat/{sub-juntendo750w06_flip-2_mt-off_space-other_MTS_softseg_bin.json => sub-juntendo750w06_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-juntendo750w06/anat/{sub-juntendo750w06_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz => sub-juntendo750w06_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-juntendo750w06/anat/{sub-juntendo750w06_space-other_T1w_softseg_bin.json => sub-juntendo750w06_space-other_T1w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-juntendo750w06/anat/{sub-juntendo750w06_space-other_T1w_softseg_bin.nii.gz => sub-juntendo750w06_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-juntendo750w06/anat/{sub-juntendo750w06_space-other_T2star_softseg_bin.json => sub-juntendo750w06_space-other_T2star_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-juntendo750w06/anat/{sub-juntendo750w06_space-other_T2star_softseg_bin.nii.gz => sub-juntendo750w06_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-juntendo750w06/anat/{sub-juntendo750w06_space-other_T2w_softseg_bin.json => sub-juntendo750w06_space-other_T2w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-juntendo750w06/anat/{sub-juntendo750w06_space-other_T2w_softseg_bin.nii.gz => sub-juntendo750w06_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-juntendo750w06/dwi/{sub-juntendo750w06_rec-average_dwi_softseg_bin.json => sub-juntendo750w06_rec-average_dwi_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-juntendo750w06/dwi/{sub-juntendo750w06_rec-average_dwi_softseg_bin.nii.gz => sub-juntendo750w06_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-mgh01/anat/{sub-mgh01_flip-1_mt-on_space-other_MTS_softseg_bin.json => sub-mgh01_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-mgh01/anat/{sub-mgh01_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz => sub-mgh01_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-mgh01/anat/{sub-mgh01_flip-2_mt-off_space-other_MTS_softseg_bin.json => sub-mgh01_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-mgh01/anat/{sub-mgh01_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz => sub-mgh01_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-mgh01/anat/{sub-mgh01_space-other_T1w_softseg_bin.json => sub-mgh01_space-other_T1w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-mgh01/anat/{sub-mgh01_space-other_T1w_softseg_bin.nii.gz => sub-mgh01_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-mgh01/anat/{sub-mgh01_space-other_T2star_softseg_bin.json => sub-mgh01_space-other_T2star_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-mgh01/anat/{sub-mgh01_space-other_T2star_softseg_bin.nii.gz => sub-mgh01_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-mgh01/anat/{sub-mgh01_space-other_T2w_softseg_bin.json => sub-mgh01_space-other_T2w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-mgh01/anat/{sub-mgh01_space-other_T2w_softseg_bin.nii.gz => sub-mgh01_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-mgh01/dwi/{sub-mgh01_rec-average_dwi_softseg_bin.json => sub-mgh01_rec-average_dwi_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-mgh01/dwi/{sub-mgh01_rec-average_dwi_softseg_bin.nii.gz => sub-mgh01_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-mgh02/anat/{sub-mgh02_flip-1_mt-on_space-other_MTS_softseg_bin.json => sub-mgh02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-mgh02/anat/{sub-mgh02_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz => sub-mgh02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-mgh02/anat/{sub-mgh02_flip-2_mt-off_space-other_MTS_softseg_bin.json => sub-mgh02_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-mgh02/anat/{sub-mgh02_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz => sub-mgh02_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-mgh02/anat/{sub-mgh02_space-other_T1w_softseg_bin.json => sub-mgh02_space-other_T1w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-mgh02/anat/{sub-mgh02_space-other_T1w_softseg_bin.nii.gz => sub-mgh02_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-mgh02/anat/{sub-mgh02_space-other_T2star_softseg_bin.json => sub-mgh02_space-other_T2star_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-mgh02/anat/{sub-mgh02_space-other_T2star_softseg_bin.nii.gz => sub-mgh02_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-mgh02/anat/{sub-mgh02_space-other_T2w_softseg_bin.json => sub-mgh02_space-other_T2w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-mgh02/anat/{sub-mgh02_space-other_T2w_softseg_bin.nii.gz => sub-mgh02_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-mgh02/dwi/{sub-mgh02_rec-average_dwi_softseg_bin.json => sub-mgh02_rec-average_dwi_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-mgh02/dwi/{sub-mgh02_rec-average_dwi_softseg_bin.nii.gz => sub-mgh02_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-mgh03/anat/{sub-mgh03_flip-1_mt-on_space-other_MTS_softseg_bin.json => sub-mgh03_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-mgh03/anat/{sub-mgh03_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz => sub-mgh03_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-mgh03/anat/{sub-mgh03_flip-2_mt-off_space-other_MTS_softseg_bin.json => sub-mgh03_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-mgh03/anat/{sub-mgh03_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz => sub-mgh03_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-mgh03/anat/{sub-mgh03_space-other_T1w_softseg_bin.json => sub-mgh03_space-other_T1w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-mgh03/anat/{sub-mgh03_space-other_T1w_softseg_bin.nii.gz => sub-mgh03_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-mgh03/anat/{sub-mgh03_space-other_T2star_softseg_bin.json => sub-mgh03_space-other_T2star_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-mgh03/anat/{sub-mgh03_space-other_T2star_softseg_bin.nii.gz => sub-mgh03_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-mgh03/anat/{sub-mgh03_space-other_T2w_softseg_bin.json => sub-mgh03_space-other_T2w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-mgh03/anat/{sub-mgh03_space-other_T2w_softseg_bin.nii.gz => sub-mgh03_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-mgh03/dwi/{sub-mgh03_rec-average_dwi_softseg_bin.json => sub-mgh03_rec-average_dwi_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-mgh03/dwi/{sub-mgh03_rec-average_dwi_softseg_bin.nii.gz => sub-mgh03_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-mgh04/anat/{sub-mgh04_flip-1_mt-on_space-other_MTS_softseg_bin.json => sub-mgh04_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-mgh04/anat/{sub-mgh04_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz => sub-mgh04_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-mgh04/anat/{sub-mgh04_flip-2_mt-off_space-other_MTS_softseg_bin.json => sub-mgh04_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-mgh04/anat/{sub-mgh04_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz => sub-mgh04_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-mgh04/anat/{sub-mgh04_space-other_T1w_softseg_bin.json => sub-mgh04_space-other_T1w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-mgh04/anat/{sub-mgh04_space-other_T1w_softseg_bin.nii.gz => sub-mgh04_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-mgh04/anat/{sub-mgh04_space-other_T2star_softseg_bin.json => sub-mgh04_space-other_T2star_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-mgh04/anat/{sub-mgh04_space-other_T2star_softseg_bin.nii.gz => sub-mgh04_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-mgh04/anat/{sub-mgh04_space-other_T2w_softseg_bin.json => sub-mgh04_space-other_T2w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-mgh04/anat/{sub-mgh04_space-other_T2w_softseg_bin.nii.gz => sub-mgh04_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-mgh04/dwi/{sub-mgh04_rec-average_dwi_softseg_bin.json => sub-mgh04_rec-average_dwi_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-mgh04/dwi/{sub-mgh04_rec-average_dwi_softseg_bin.nii.gz => sub-mgh04_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-mgh05/anat/{sub-mgh05_flip-1_mt-on_space-other_MTS_softseg_bin.json => sub-mgh05_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-mgh05/anat/{sub-mgh05_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz => sub-mgh05_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-mgh05/anat/{sub-mgh05_flip-2_mt-off_space-other_MTS_softseg_bin.json => sub-mgh05_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-mgh05/anat/{sub-mgh05_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz => sub-mgh05_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-mgh05/anat/{sub-mgh05_space-other_T1w_softseg_bin.json => sub-mgh05_space-other_T1w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-mgh05/anat/{sub-mgh05_space-other_T1w_softseg_bin.nii.gz => sub-mgh05_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-mgh05/anat/{sub-mgh05_space-other_T2star_softseg_bin.json => sub-mgh05_space-other_T2star_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-mgh05/anat/{sub-mgh05_space-other_T2star_softseg_bin.nii.gz => sub-mgh05_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-mgh05/anat/{sub-mgh05_space-other_T2w_softseg_bin.json => sub-mgh05_space-other_T2w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-mgh05/anat/{sub-mgh05_space-other_T2w_softseg_bin.nii.gz => sub-mgh05_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-mgh05/dwi/{sub-mgh05_rec-average_dwi_softseg_bin.json => sub-mgh05_rec-average_dwi_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-mgh05/dwi/{sub-mgh05_rec-average_dwi_softseg_bin.nii.gz => sub-mgh05_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-mgh06/anat/{sub-mgh06_flip-1_mt-on_space-other_MTS_softseg_bin.json => sub-mgh06_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-mgh06/anat/{sub-mgh06_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz => sub-mgh06_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-mgh06/anat/{sub-mgh06_flip-2_mt-off_space-other_MTS_softseg_bin.json => sub-mgh06_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-mgh06/anat/{sub-mgh06_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz => sub-mgh06_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-mgh06/anat/{sub-mgh06_space-other_T1w_softseg_bin.json => sub-mgh06_space-other_T1w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-mgh06/anat/{sub-mgh06_space-other_T1w_softseg_bin.nii.gz => sub-mgh06_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-mgh06/anat/{sub-mgh06_space-other_T2star_softseg_bin.json => sub-mgh06_space-other_T2star_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-mgh06/anat/{sub-mgh06_space-other_T2star_softseg_bin.nii.gz => sub-mgh06_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-mgh06/anat/{sub-mgh06_space-other_T2w_softseg_bin.json => sub-mgh06_space-other_T2w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-mgh06/anat/{sub-mgh06_space-other_T2w_softseg_bin.nii.gz => sub-mgh06_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-mgh06/dwi/{sub-mgh06_rec-average_dwi_softseg_bin.json => sub-mgh06_rec-average_dwi_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-mgh06/dwi/{sub-mgh06_rec-average_dwi_softseg_bin.nii.gz => sub-mgh06_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-milan01/anat/{sub-milan01_flip-1_mt-on_space-other_MTS_softseg_bin.json => sub-milan01_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-milan01/anat/{sub-milan01_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz => sub-milan01_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-milan01/anat/{sub-milan01_flip-2_mt-off_space-other_MTS_softseg_bin.json => sub-milan01_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-milan01/anat/{sub-milan01_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz => sub-milan01_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-milan01/anat/{sub-milan01_space-other_T1w_softseg_bin.json => sub-milan01_space-other_T1w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-milan01/anat/{sub-milan01_space-other_T1w_softseg_bin.nii.gz => sub-milan01_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-milan01/anat/{sub-milan01_space-other_T2star_softseg_bin.json => sub-milan01_space-other_T2star_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-milan01/anat/{sub-milan01_space-other_T2star_softseg_bin.nii.gz => sub-milan01_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-milan01/anat/{sub-milan01_space-other_T2w_softseg_bin.json => sub-milan01_space-other_T2w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-milan01/anat/{sub-milan01_space-other_T2w_softseg_bin.nii.gz => sub-milan01_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-milan01/dwi/{sub-milan01_rec-average_dwi_softseg_bin.json => sub-milan01_rec-average_dwi_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-milan01/dwi/{sub-milan01_rec-average_dwi_softseg_bin.nii.gz => sub-milan01_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-milan02/anat/{sub-milan02_flip-1_mt-on_space-other_MTS_softseg_bin.json => sub-milan02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-milan02/anat/{sub-milan02_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz => sub-milan02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-milan02/anat/{sub-milan02_flip-2_mt-off_space-other_MTS_softseg_bin.json => sub-milan02_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-milan02/anat/{sub-milan02_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz => sub-milan02_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-milan02/anat/{sub-milan02_space-other_T1w_softseg_bin.json => sub-milan02_space-other_T1w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-milan02/anat/{sub-milan02_space-other_T1w_softseg_bin.nii.gz => sub-milan02_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-milan02/anat/{sub-milan02_space-other_T2star_softseg_bin.json => sub-milan02_space-other_T2star_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-milan02/anat/{sub-milan02_space-other_T2star_softseg_bin.nii.gz => sub-milan02_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-milan02/anat/{sub-milan02_space-other_T2w_softseg_bin.json => sub-milan02_space-other_T2w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-milan02/anat/{sub-milan02_space-other_T2w_softseg_bin.nii.gz => sub-milan02_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-milan02/dwi/{sub-milan02_rec-average_dwi_softseg_bin.json => sub-milan02_rec-average_dwi_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-milan02/dwi/{sub-milan02_rec-average_dwi_softseg_bin.nii.gz => sub-milan02_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-milan03/anat/{sub-milan03_flip-1_mt-on_space-other_MTS_softseg_bin.json => sub-milan03_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-milan03/anat/{sub-milan03_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz => sub-milan03_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-milan03/anat/{sub-milan03_flip-2_mt-off_space-other_MTS_softseg_bin.json => sub-milan03_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-milan03/anat/{sub-milan03_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz => sub-milan03_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-milan03/anat/{sub-milan03_space-other_T1w_softseg_bin.json => sub-milan03_space-other_T1w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-milan03/anat/{sub-milan03_space-other_T1w_softseg_bin.nii.gz => sub-milan03_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-milan03/anat/{sub-milan03_space-other_T2star_softseg_bin.json => sub-milan03_space-other_T2star_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-milan03/anat/{sub-milan03_space-other_T2star_softseg_bin.nii.gz => sub-milan03_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-milan03/anat/{sub-milan03_space-other_T2w_softseg_bin.json => sub-milan03_space-other_T2w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-milan03/anat/{sub-milan03_space-other_T2w_softseg_bin.nii.gz => sub-milan03_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-milan03/dwi/{sub-milan03_rec-average_dwi_softseg_bin.json => sub-milan03_rec-average_dwi_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-milan03/dwi/{sub-milan03_rec-average_dwi_softseg_bin.nii.gz => sub-milan03_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-milan04/anat/{sub-milan04_flip-1_mt-on_space-other_MTS_softseg_bin.json => sub-milan04_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-milan04/anat/{sub-milan04_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz => sub-milan04_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-milan04/anat/{sub-milan04_flip-2_mt-off_space-other_MTS_softseg_bin.json => sub-milan04_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-milan04/anat/{sub-milan04_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz => sub-milan04_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-milan04/anat/{sub-milan04_space-other_T1w_softseg_bin.json => sub-milan04_space-other_T1w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-milan04/anat/{sub-milan04_space-other_T1w_softseg_bin.nii.gz => sub-milan04_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-milan04/anat/{sub-milan04_space-other_T2star_softseg_bin.json => sub-milan04_space-other_T2star_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-milan04/anat/{sub-milan04_space-other_T2star_softseg_bin.nii.gz => sub-milan04_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-milan04/anat/{sub-milan04_space-other_T2w_softseg_bin.json => sub-milan04_space-other_T2w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-milan04/anat/{sub-milan04_space-other_T2w_softseg_bin.nii.gz => sub-milan04_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-milan04/dwi/{sub-milan04_rec-average_dwi_softseg_bin.json => sub-milan04_rec-average_dwi_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-milan04/dwi/{sub-milan04_rec-average_dwi_softseg_bin.nii.gz => sub-milan04_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-milan05/anat/{sub-milan05_flip-1_mt-on_space-other_MTS_softseg_bin.json => sub-milan05_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-milan05/anat/{sub-milan05_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz => sub-milan05_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-milan05/anat/{sub-milan05_flip-2_mt-off_space-other_MTS_softseg_bin.json => sub-milan05_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-milan05/anat/{sub-milan05_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz => sub-milan05_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-milan05/anat/{sub-milan05_space-other_T1w_softseg_bin.json => sub-milan05_space-other_T1w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-milan05/anat/{sub-milan05_space-other_T1w_softseg_bin.nii.gz => sub-milan05_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-milan05/anat/{sub-milan05_space-other_T2star_softseg_bin.json => sub-milan05_space-other_T2star_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-milan05/anat/{sub-milan05_space-other_T2star_softseg_bin.nii.gz => sub-milan05_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-milan05/anat/{sub-milan05_space-other_T2w_softseg_bin.json => sub-milan05_space-other_T2w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-milan05/anat/{sub-milan05_space-other_T2w_softseg_bin.nii.gz => sub-milan05_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-milan05/dwi/{sub-milan05_rec-average_dwi_softseg_bin.json => sub-milan05_rec-average_dwi_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-milan05/dwi/{sub-milan05_rec-average_dwi_softseg_bin.nii.gz => sub-milan05_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-milan06/anat/{sub-milan06_flip-1_mt-on_space-other_MTS_softseg_bin.json => sub-milan06_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-milan06/anat/{sub-milan06_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz => sub-milan06_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-milan06/anat/{sub-milan06_flip-2_mt-off_space-other_MTS_softseg_bin.json => sub-milan06_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-milan06/anat/{sub-milan06_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz => sub-milan06_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-milan06/anat/{sub-milan06_space-other_T1w_softseg_bin.json => sub-milan06_space-other_T1w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-milan06/anat/{sub-milan06_space-other_T1w_softseg_bin.nii.gz => sub-milan06_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-milan06/anat/{sub-milan06_space-other_T2star_softseg_bin.json => sub-milan06_space-other_T2star_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-milan06/anat/{sub-milan06_space-other_T2star_softseg_bin.nii.gz => sub-milan06_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-milan06/anat/{sub-milan06_space-other_T2w_softseg_bin.json => sub-milan06_space-other_T2w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-milan06/anat/{sub-milan06_space-other_T2w_softseg_bin.nii.gz => sub-milan06_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-milan06/dwi/{sub-milan06_rec-average_dwi_softseg_bin.json => sub-milan06_rec-average_dwi_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-milan06/dwi/{sub-milan06_rec-average_dwi_softseg_bin.nii.gz => sub-milan06_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-milan07/anat/{sub-milan07_flip-1_mt-on_space-other_MTS_softseg_bin.json => sub-milan07_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-milan07/anat/{sub-milan07_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz => sub-milan07_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-milan07/anat/{sub-milan07_flip-2_mt-off_space-other_MTS_softseg_bin.json => sub-milan07_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-milan07/anat/{sub-milan07_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz => sub-milan07_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-milan07/anat/{sub-milan07_space-other_T1w_softseg_bin.json => sub-milan07_space-other_T1w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-milan07/anat/{sub-milan07_space-other_T1w_softseg_bin.nii.gz => sub-milan07_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-milan07/anat/{sub-milan07_space-other_T2star_softseg_bin.json => sub-milan07_space-other_T2star_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-milan07/anat/{sub-milan07_space-other_T2star_softseg_bin.nii.gz => sub-milan07_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-milan07/anat/{sub-milan07_space-other_T2w_softseg_bin.json => sub-milan07_space-other_T2w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-milan07/anat/{sub-milan07_space-other_T2w_softseg_bin.nii.gz => sub-milan07_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-milan07/dwi/{sub-milan07_rec-average_dwi_softseg_bin.json => sub-milan07_rec-average_dwi_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-milan07/dwi/{sub-milan07_rec-average_dwi_softseg_bin.nii.gz => sub-milan07_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-mniPilot1/anat/{sub-mniPilot1_flip-1_mt-on_space-other_MTS_softseg_bin.json => sub-mniPilot1_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-mniPilot1/anat/{sub-mniPilot1_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz => sub-mniPilot1_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-mniPilot1/anat/{sub-mniPilot1_flip-2_mt-off_space-other_MTS_softseg_bin.json => sub-mniPilot1_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-mniPilot1/anat/{sub-mniPilot1_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz => sub-mniPilot1_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-mniPilot1/anat/{sub-mniPilot1_space-other_T1w_softseg_bin.json => sub-mniPilot1_space-other_T1w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-mniPilot1/anat/{sub-mniPilot1_space-other_T1w_softseg_bin.nii.gz => sub-mniPilot1_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-mniPilot1/anat/{sub-mniPilot1_space-other_T2star_softseg_bin.json => sub-mniPilot1_space-other_T2star_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-mniPilot1/anat/{sub-mniPilot1_space-other_T2star_softseg_bin.nii.gz => sub-mniPilot1_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-mniPilot1/anat/{sub-mniPilot1_space-other_T2w_softseg_bin.json => sub-mniPilot1_space-other_T2w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-mniPilot1/anat/{sub-mniPilot1_space-other_T2w_softseg_bin.nii.gz => sub-mniPilot1_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-mniPilot1/dwi/{sub-mniPilot1_rec-average_dwi_softseg_bin.json => sub-mniPilot1_rec-average_dwi_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-mniPilot1/dwi/{sub-mniPilot1_rec-average_dwi_softseg_bin.nii.gz => sub-mniPilot1_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-mniS01/anat/{sub-mniS01_flip-1_mt-on_space-other_MTS_softseg_bin.json => sub-mniS01_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-mniS01/anat/{sub-mniS01_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz => sub-mniS01_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-mniS01/anat/{sub-mniS01_flip-2_mt-off_space-other_MTS_softseg_bin.json => sub-mniS01_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-mniS01/anat/{sub-mniS01_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz => sub-mniS01_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-mniS01/anat/{sub-mniS01_space-other_T1w_softseg_bin.json => sub-mniS01_space-other_T1w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-mniS01/anat/{sub-mniS01_space-other_T1w_softseg_bin.nii.gz => sub-mniS01_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-mniS01/anat/{sub-mniS01_space-other_T2star_softseg_bin.json => sub-mniS01_space-other_T2star_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-mniS01/anat/{sub-mniS01_space-other_T2star_softseg_bin.nii.gz => sub-mniS01_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-mniS01/anat/{sub-mniS01_space-other_T2w_softseg_bin.json => sub-mniS01_space-other_T2w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-mniS01/anat/{sub-mniS01_space-other_T2w_softseg_bin.nii.gz => sub-mniS01_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-mniS01/dwi/{sub-mniS01_rec-average_dwi_softseg_bin.json => sub-mniS01_rec-average_dwi_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-mniS01/dwi/{sub-mniS01_rec-average_dwi_softseg_bin.nii.gz => sub-mniS01_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-mniS02/anat/{sub-mniS02_flip-1_mt-on_space-other_MTS_softseg_bin.json => sub-mniS02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-mniS02/anat/{sub-mniS02_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz => sub-mniS02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-mniS02/anat/{sub-mniS02_flip-2_mt-off_space-other_MTS_softseg_bin.json => sub-mniS02_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-mniS02/anat/{sub-mniS02_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz => sub-mniS02_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-mniS02/anat/{sub-mniS02_space-other_T1w_softseg_bin.json => sub-mniS02_space-other_T1w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-mniS02/anat/{sub-mniS02_space-other_T1w_softseg_bin.nii.gz => sub-mniS02_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-mniS02/anat/{sub-mniS02_space-other_T2star_softseg_bin.json => sub-mniS02_space-other_T2star_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-mniS02/anat/{sub-mniS02_space-other_T2star_softseg_bin.nii.gz => sub-mniS02_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-mniS02/anat/{sub-mniS02_space-other_T2w_softseg_bin.json => sub-mniS02_space-other_T2w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-mniS02/anat/{sub-mniS02_space-other_T2w_softseg_bin.nii.gz => sub-mniS02_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-mniS02/dwi/{sub-mniS02_rec-average_dwi_softseg_bin.json => sub-mniS02_rec-average_dwi_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-mniS02/dwi/{sub-mniS02_rec-average_dwi_softseg_bin.nii.gz => sub-mniS02_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-mniS03/anat/{sub-mniS03_flip-1_mt-on_space-other_MTS_softseg_bin.json => sub-mniS03_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-mniS03/anat/{sub-mniS03_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz => sub-mniS03_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-mniS03/anat/{sub-mniS03_flip-2_mt-off_space-other_MTS_softseg_bin.json => sub-mniS03_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-mniS03/anat/{sub-mniS03_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz => sub-mniS03_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-mniS03/anat/{sub-mniS03_space-other_T1w_softseg_bin.json => sub-mniS03_space-other_T1w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-mniS03/anat/{sub-mniS03_space-other_T1w_softseg_bin.nii.gz => sub-mniS03_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-mniS03/anat/{sub-mniS03_space-other_T2star_softseg_bin.json => sub-mniS03_space-other_T2star_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-mniS03/anat/{sub-mniS03_space-other_T2star_softseg_bin.nii.gz => sub-mniS03_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-mniS03/anat/{sub-mniS03_space-other_T2w_softseg_bin.json => sub-mniS03_space-other_T2w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-mniS03/anat/{sub-mniS03_space-other_T2w_softseg_bin.nii.gz => sub-mniS03_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-mniS03/dwi/{sub-mniS03_rec-average_dwi_softseg_bin.json => sub-mniS03_rec-average_dwi_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-mniS03/dwi/{sub-mniS03_rec-average_dwi_softseg_bin.nii.gz => sub-mniS03_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-mniS04/anat/{sub-mniS04_flip-1_mt-on_space-other_MTS_softseg_bin.json => sub-mniS04_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-mniS04/anat/{sub-mniS04_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz => sub-mniS04_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-mniS04/anat/{sub-mniS04_flip-2_mt-off_space-other_MTS_softseg_bin.json => sub-mniS04_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-mniS04/anat/{sub-mniS04_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz => sub-mniS04_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-mniS04/anat/{sub-mniS04_space-other_T1w_softseg_bin.json => sub-mniS04_space-other_T1w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-mniS04/anat/{sub-mniS04_space-other_T1w_softseg_bin.nii.gz => sub-mniS04_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-mniS04/anat/{sub-mniS04_space-other_T2star_softseg_bin.json => sub-mniS04_space-other_T2star_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-mniS04/anat/{sub-mniS04_space-other_T2star_softseg_bin.nii.gz => sub-mniS04_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-mniS04/anat/{sub-mniS04_space-other_T2w_softseg_bin.json => sub-mniS04_space-other_T2w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-mniS04/anat/{sub-mniS04_space-other_T2w_softseg_bin.nii.gz => sub-mniS04_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-mniS04/dwi/{sub-mniS04_rec-average_dwi_softseg_bin.json => sub-mniS04_rec-average_dwi_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-mniS04/dwi/{sub-mniS04_rec-average_dwi_softseg_bin.nii.gz => sub-mniS04_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-mniS05/anat/{sub-mniS05_flip-1_mt-on_space-other_MTS_softseg_bin.json => sub-mniS05_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-mniS05/anat/{sub-mniS05_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz => sub-mniS05_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-mniS05/anat/{sub-mniS05_flip-2_mt-off_space-other_MTS_softseg_bin.json => sub-mniS05_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-mniS05/anat/{sub-mniS05_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz => sub-mniS05_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-mniS05/anat/{sub-mniS05_space-other_T1w_softseg_bin.json => sub-mniS05_space-other_T1w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-mniS05/anat/{sub-mniS05_space-other_T1w_softseg_bin.nii.gz => sub-mniS05_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-mniS05/anat/{sub-mniS05_space-other_T2star_softseg_bin.json => sub-mniS05_space-other_T2star_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-mniS05/anat/{sub-mniS05_space-other_T2star_softseg_bin.nii.gz => sub-mniS05_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-mniS05/anat/{sub-mniS05_space-other_T2w_softseg_bin.json => sub-mniS05_space-other_T2w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-mniS05/anat/{sub-mniS05_space-other_T2w_softseg_bin.nii.gz => sub-mniS05_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-mniS05/dwi/{sub-mniS05_rec-average_dwi_softseg_bin.json => sub-mniS05_rec-average_dwi_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-mniS05/dwi/{sub-mniS05_rec-average_dwi_softseg_bin.nii.gz => sub-mniS05_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-mniS06/anat/{sub-mniS06_flip-1_mt-on_space-other_MTS_softseg_bin.json => sub-mniS06_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-mniS06/anat/{sub-mniS06_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz => sub-mniS06_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-mniS06/anat/{sub-mniS06_flip-2_mt-off_space-other_MTS_softseg_bin.json => sub-mniS06_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-mniS06/anat/{sub-mniS06_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz => sub-mniS06_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-mniS06/anat/{sub-mniS06_space-other_T1w_softseg_bin.json => sub-mniS06_space-other_T1w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-mniS06/anat/{sub-mniS06_space-other_T1w_softseg_bin.nii.gz => sub-mniS06_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-mniS06/anat/{sub-mniS06_space-other_T2star_softseg_bin.json => sub-mniS06_space-other_T2star_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-mniS06/anat/{sub-mniS06_space-other_T2star_softseg_bin.nii.gz => sub-mniS06_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-mniS06/anat/{sub-mniS06_space-other_T2w_softseg_bin.json => sub-mniS06_space-other_T2w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-mniS06/anat/{sub-mniS06_space-other_T2w_softseg_bin.nii.gz => sub-mniS06_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-mniS06/dwi/{sub-mniS06_rec-average_dwi_softseg_bin.json => sub-mniS06_rec-average_dwi_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-mniS06/dwi/{sub-mniS06_rec-average_dwi_softseg_bin.nii.gz => sub-mniS06_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-mniS07/anat/{sub-mniS07_flip-1_mt-on_space-other_MTS_softseg_bin.json => sub-mniS07_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-mniS07/anat/{sub-mniS07_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz => sub-mniS07_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-mniS07/anat/{sub-mniS07_flip-2_mt-off_space-other_MTS_softseg_bin.json => sub-mniS07_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-mniS07/anat/{sub-mniS07_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz => sub-mniS07_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-mniS07/anat/{sub-mniS07_space-other_T1w_softseg_bin.json => sub-mniS07_space-other_T1w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-mniS07/anat/{sub-mniS07_space-other_T1w_softseg_bin.nii.gz => sub-mniS07_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-mniS07/anat/{sub-mniS07_space-other_T2star_softseg_bin.json => sub-mniS07_space-other_T2star_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-mniS07/anat/{sub-mniS07_space-other_T2star_softseg_bin.nii.gz => sub-mniS07_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-mniS07/anat/{sub-mniS07_space-other_T2w_softseg_bin.json => sub-mniS07_space-other_T2w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-mniS07/anat/{sub-mniS07_space-other_T2w_softseg_bin.nii.gz => sub-mniS07_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-mniS07/dwi/{sub-mniS07_rec-average_dwi_softseg_bin.json => sub-mniS07_rec-average_dwi_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-mniS07/dwi/{sub-mniS07_rec-average_dwi_softseg_bin.nii.gz => sub-mniS07_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-mniS08/anat/{sub-mniS08_flip-1_mt-on_space-other_MTS_softseg_bin.json => sub-mniS08_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-mniS08/anat/{sub-mniS08_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz => sub-mniS08_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-mniS08/anat/{sub-mniS08_flip-2_mt-off_space-other_MTS_softseg_bin.json => sub-mniS08_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-mniS08/anat/{sub-mniS08_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz => sub-mniS08_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-mniS08/anat/{sub-mniS08_space-other_T1w_softseg_bin.json => sub-mniS08_space-other_T1w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-mniS08/anat/{sub-mniS08_space-other_T1w_softseg_bin.nii.gz => sub-mniS08_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-mniS08/anat/{sub-mniS08_space-other_T2star_softseg_bin.json => sub-mniS08_space-other_T2star_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-mniS08/anat/{sub-mniS08_space-other_T2star_softseg_bin.nii.gz => sub-mniS08_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-mniS08/anat/{sub-mniS08_space-other_T2w_softseg_bin.json => sub-mniS08_space-other_T2w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-mniS08/anat/{sub-mniS08_space-other_T2w_softseg_bin.nii.gz => sub-mniS08_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-mniS08/dwi/{sub-mniS08_rec-average_dwi_softseg_bin.json => sub-mniS08_rec-average_dwi_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-mniS08/dwi/{sub-mniS08_rec-average_dwi_softseg_bin.nii.gz => sub-mniS08_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-mniS09/anat/{sub-mniS09_flip-1_mt-on_space-other_MTS_softseg_bin.json => sub-mniS09_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-mniS09/anat/{sub-mniS09_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz => sub-mniS09_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-mniS09/anat/{sub-mniS09_flip-2_mt-off_space-other_MTS_softseg_bin.json => sub-mniS09_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-mniS09/anat/{sub-mniS09_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz => sub-mniS09_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-mniS09/anat/{sub-mniS09_space-other_T1w_softseg_bin.json => sub-mniS09_space-other_T1w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-mniS09/anat/{sub-mniS09_space-other_T1w_softseg_bin.nii.gz => sub-mniS09_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-mniS09/anat/{sub-mniS09_space-other_T2star_softseg_bin.json => sub-mniS09_space-other_T2star_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-mniS09/anat/{sub-mniS09_space-other_T2star_softseg_bin.nii.gz => sub-mniS09_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-mniS09/anat/{sub-mniS09_space-other_T2w_softseg_bin.json => sub-mniS09_space-other_T2w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-mniS09/anat/{sub-mniS09_space-other_T2w_softseg_bin.nii.gz => sub-mniS09_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-mniS09/dwi/{sub-mniS09_rec-average_dwi_softseg_bin.json => sub-mniS09_rec-average_dwi_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-mniS09/dwi/{sub-mniS09_rec-average_dwi_softseg_bin.nii.gz => sub-mniS09_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-mountSinai01/anat/{sub-mountSinai01_flip-1_mt-on_space-other_MTS_softseg_bin.json => sub-mountSinai01_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-mountSinai01/anat/{sub-mountSinai01_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz => sub-mountSinai01_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-mountSinai01/anat/{sub-mountSinai01_flip-2_mt-off_space-other_MTS_softseg_bin.json => sub-mountSinai01_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-mountSinai01/anat/{sub-mountSinai01_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz => sub-mountSinai01_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-mountSinai01/anat/{sub-mountSinai01_space-other_T1w_softseg_bin.json => sub-mountSinai01_space-other_T1w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-mountSinai01/anat/{sub-mountSinai01_space-other_T1w_softseg_bin.nii.gz => sub-mountSinai01_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-mountSinai01/anat/{sub-mountSinai01_space-other_T2star_softseg_bin.json => sub-mountSinai01_space-other_T2star_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-mountSinai01/anat/{sub-mountSinai01_space-other_T2star_softseg_bin.nii.gz => sub-mountSinai01_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-mountSinai01/anat/{sub-mountSinai01_space-other_T2w_softseg_bin.json => sub-mountSinai01_space-other_T2w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-mountSinai01/anat/{sub-mountSinai01_space-other_T2w_softseg_bin.nii.gz => sub-mountSinai01_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-mountSinai01/dwi/{sub-mountSinai01_rec-average_dwi_softseg_bin.json => sub-mountSinai01_rec-average_dwi_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-mountSinai01/dwi/{sub-mountSinai01_rec-average_dwi_softseg_bin.nii.gz => sub-mountSinai01_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-mountSinai02/anat/{sub-mountSinai02_flip-1_mt-on_space-other_MTS_softseg_bin.json => sub-mountSinai02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-mountSinai02/anat/{sub-mountSinai02_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz => sub-mountSinai02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-mountSinai02/anat/{sub-mountSinai02_flip-2_mt-off_space-other_MTS_softseg_bin.json => sub-mountSinai02_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-mountSinai02/anat/{sub-mountSinai02_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz => sub-mountSinai02_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-mountSinai02/anat/{sub-mountSinai02_space-other_T1w_softseg_bin.json => sub-mountSinai02_space-other_T1w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-mountSinai02/anat/{sub-mountSinai02_space-other_T1w_softseg_bin.nii.gz => sub-mountSinai02_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-mountSinai02/anat/{sub-mountSinai02_space-other_T2star_softseg_bin.json => sub-mountSinai02_space-other_T2star_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-mountSinai02/anat/{sub-mountSinai02_space-other_T2star_softseg_bin.nii.gz => sub-mountSinai02_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-mountSinai02/anat/{sub-mountSinai02_space-other_T2w_softseg_bin.json => sub-mountSinai02_space-other_T2w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-mountSinai02/anat/{sub-mountSinai02_space-other_T2w_softseg_bin.nii.gz => sub-mountSinai02_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-mountSinai02/dwi/{sub-mountSinai02_rec-average_dwi_softseg_bin.json => sub-mountSinai02_rec-average_dwi_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-mountSinai02/dwi/{sub-mountSinai02_rec-average_dwi_softseg_bin.nii.gz => sub-mountSinai02_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-mountSinai04/anat/{sub-mountSinai04_flip-1_mt-on_space-other_MTS_softseg_bin.json => sub-mountSinai04_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-mountSinai04/anat/{sub-mountSinai04_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz => sub-mountSinai04_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-mountSinai04/anat/{sub-mountSinai04_flip-2_mt-off_space-other_MTS_softseg_bin.json => sub-mountSinai04_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-mountSinai04/anat/{sub-mountSinai04_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz => sub-mountSinai04_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-mountSinai04/anat/{sub-mountSinai04_space-other_T1w_softseg_bin.json => sub-mountSinai04_space-other_T1w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-mountSinai04/anat/{sub-mountSinai04_space-other_T1w_softseg_bin.nii.gz => sub-mountSinai04_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-mountSinai04/anat/{sub-mountSinai04_space-other_T2star_softseg_bin.json => sub-mountSinai04_space-other_T2star_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-mountSinai04/anat/{sub-mountSinai04_space-other_T2star_softseg_bin.nii.gz => sub-mountSinai04_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-mountSinai04/anat/{sub-mountSinai04_space-other_T2w_softseg_bin.json => sub-mountSinai04_space-other_T2w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-mountSinai04/anat/{sub-mountSinai04_space-other_T2w_softseg_bin.nii.gz => sub-mountSinai04_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-mountSinai04/dwi/{sub-mountSinai04_rec-average_dwi_softseg_bin.json => sub-mountSinai04_rec-average_dwi_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-mountSinai04/dwi/{sub-mountSinai04_rec-average_dwi_softseg_bin.nii.gz => sub-mountSinai04_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-mountSinai05/anat/{sub-mountSinai05_flip-1_mt-on_space-other_MTS_softseg_bin.json => sub-mountSinai05_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-mountSinai05/anat/{sub-mountSinai05_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz => sub-mountSinai05_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-mountSinai05/anat/{sub-mountSinai05_flip-2_mt-off_space-other_MTS_softseg_bin.json => sub-mountSinai05_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-mountSinai05/anat/{sub-mountSinai05_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz => sub-mountSinai05_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-mountSinai05/anat/{sub-mountSinai05_space-other_T1w_softseg_bin.json => sub-mountSinai05_space-other_T1w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-mountSinai05/anat/{sub-mountSinai05_space-other_T1w_softseg_bin.nii.gz => sub-mountSinai05_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-mountSinai05/anat/{sub-mountSinai05_space-other_T2star_softseg_bin.json => sub-mountSinai05_space-other_T2star_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-mountSinai05/anat/{sub-mountSinai05_space-other_T2star_softseg_bin.nii.gz => sub-mountSinai05_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-mountSinai05/anat/{sub-mountSinai05_space-other_T2w_softseg_bin.json => sub-mountSinai05_space-other_T2w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-mountSinai05/anat/{sub-mountSinai05_space-other_T2w_softseg_bin.nii.gz => sub-mountSinai05_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-mountSinai05/dwi/{sub-mountSinai05_rec-average_dwi_softseg_bin.json => sub-mountSinai05_rec-average_dwi_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-mountSinai05/dwi/{sub-mountSinai05_rec-average_dwi_softseg_bin.nii.gz => sub-mountSinai05_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-mountSinai06/anat/{sub-mountSinai06_flip-1_mt-on_space-other_MTS_softseg_bin.json => sub-mountSinai06_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-mountSinai06/anat/{sub-mountSinai06_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz => sub-mountSinai06_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-mountSinai06/anat/{sub-mountSinai06_flip-2_mt-off_space-other_MTS_softseg_bin.json => sub-mountSinai06_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-mountSinai06/anat/{sub-mountSinai06_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz => sub-mountSinai06_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-mountSinai06/anat/{sub-mountSinai06_space-other_T1w_softseg_bin.json => sub-mountSinai06_space-other_T1w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-mountSinai06/anat/{sub-mountSinai06_space-other_T1w_softseg_bin.nii.gz => sub-mountSinai06_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-mountSinai06/anat/{sub-mountSinai06_space-other_T2star_softseg_bin.json => sub-mountSinai06_space-other_T2star_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-mountSinai06/anat/{sub-mountSinai06_space-other_T2star_softseg_bin.nii.gz => sub-mountSinai06_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-mountSinai06/anat/{sub-mountSinai06_space-other_T2w_softseg_bin.json => sub-mountSinai06_space-other_T2w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-mountSinai06/anat/{sub-mountSinai06_space-other_T2w_softseg_bin.nii.gz => sub-mountSinai06_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-mountSinai06/dwi/{sub-mountSinai06_rec-average_dwi_softseg_bin.json => sub-mountSinai06_rec-average_dwi_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-mountSinai06/dwi/{sub-mountSinai06_rec-average_dwi_softseg_bin.nii.gz => sub-mountSinai06_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-mpicbs01/anat/{sub-mpicbs01_flip-1_mt-on_space-other_MTS_softseg_bin.json => sub-mpicbs01_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-mpicbs01/anat/{sub-mpicbs01_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz => sub-mpicbs01_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-mpicbs01/anat/{sub-mpicbs01_flip-2_mt-off_space-other_MTS_softseg_bin.json => sub-mpicbs01_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-mpicbs01/anat/{sub-mpicbs01_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz => sub-mpicbs01_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-mpicbs01/anat/{sub-mpicbs01_space-other_T1w_softseg_bin.json => sub-mpicbs01_space-other_T1w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-mpicbs01/anat/{sub-mpicbs01_space-other_T1w_softseg_bin.nii.gz => sub-mpicbs01_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-mpicbs01/anat/{sub-mpicbs01_space-other_T2star_softseg_bin.json => sub-mpicbs01_space-other_T2star_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-mpicbs01/anat/{sub-mpicbs01_space-other_T2star_softseg_bin.nii.gz => sub-mpicbs01_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-mpicbs01/anat/{sub-mpicbs01_space-other_T2w_softseg_bin.json => sub-mpicbs01_space-other_T2w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-mpicbs01/anat/{sub-mpicbs01_space-other_T2w_softseg_bin.nii.gz => sub-mpicbs01_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-mpicbs01/dwi/{sub-mpicbs01_rec-average_dwi_softseg_bin.json => sub-mpicbs01_rec-average_dwi_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-mpicbs01/dwi/{sub-mpicbs01_rec-average_dwi_softseg_bin.nii.gz => sub-mpicbs01_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-mpicbs02/anat/{sub-mpicbs02_flip-1_mt-on_space-other_MTS_softseg_bin.json => sub-mpicbs02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-mpicbs02/anat/{sub-mpicbs02_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz => sub-mpicbs02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-mpicbs02/anat/{sub-mpicbs02_flip-2_mt-off_space-other_MTS_softseg_bin.json => sub-mpicbs02_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-mpicbs02/anat/{sub-mpicbs02_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz => sub-mpicbs02_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-mpicbs02/anat/{sub-mpicbs02_space-other_T1w_softseg_bin.json => sub-mpicbs02_space-other_T1w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-mpicbs02/anat/{sub-mpicbs02_space-other_T1w_softseg_bin.nii.gz => sub-mpicbs02_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-mpicbs02/anat/{sub-mpicbs02_space-other_T2star_softseg_bin.json => sub-mpicbs02_space-other_T2star_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-mpicbs02/anat/{sub-mpicbs02_space-other_T2star_softseg_bin.nii.gz => sub-mpicbs02_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-mpicbs02/anat/{sub-mpicbs02_space-other_T2w_softseg_bin.json => sub-mpicbs02_space-other_T2w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-mpicbs02/anat/{sub-mpicbs02_space-other_T2w_softseg_bin.nii.gz => sub-mpicbs02_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-mpicbs02/dwi/{sub-mpicbs02_rec-average_dwi_softseg_bin.json => sub-mpicbs02_rec-average_dwi_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-mpicbs02/dwi/{sub-mpicbs02_rec-average_dwi_softseg_bin.nii.gz => sub-mpicbs02_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-mpicbs03/anat/{sub-mpicbs03_flip-1_mt-on_space-other_MTS_softseg_bin.json => sub-mpicbs03_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-mpicbs03/anat/{sub-mpicbs03_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz => sub-mpicbs03_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-mpicbs03/anat/{sub-mpicbs03_flip-2_mt-off_space-other_MTS_softseg_bin.json => sub-mpicbs03_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-mpicbs03/anat/{sub-mpicbs03_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz => sub-mpicbs03_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-mpicbs03/anat/{sub-mpicbs03_space-other_T1w_softseg_bin.json => sub-mpicbs03_space-other_T1w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-mpicbs03/anat/{sub-mpicbs03_space-other_T1w_softseg_bin.nii.gz => sub-mpicbs03_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-mpicbs03/anat/{sub-mpicbs03_space-other_T2star_softseg_bin.json => sub-mpicbs03_space-other_T2star_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-mpicbs03/anat/{sub-mpicbs03_space-other_T2star_softseg_bin.nii.gz => sub-mpicbs03_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-mpicbs03/anat/{sub-mpicbs03_space-other_T2w_softseg_bin.json => sub-mpicbs03_space-other_T2w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-mpicbs03/anat/{sub-mpicbs03_space-other_T2w_softseg_bin.nii.gz => sub-mpicbs03_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-mpicbs03/dwi/{sub-mpicbs03_rec-average_dwi_softseg_bin.json => sub-mpicbs03_rec-average_dwi_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-mpicbs03/dwi/{sub-mpicbs03_rec-average_dwi_softseg_bin.nii.gz => sub-mpicbs03_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-mpicbs05/anat/{sub-mpicbs05_flip-1_mt-on_space-other_MTS_softseg_bin.json => sub-mpicbs05_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-mpicbs05/anat/{sub-mpicbs05_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz => sub-mpicbs05_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-mpicbs05/anat/{sub-mpicbs05_flip-2_mt-off_space-other_MTS_softseg_bin.json => sub-mpicbs05_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-mpicbs05/anat/{sub-mpicbs05_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz => sub-mpicbs05_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-mpicbs05/anat/{sub-mpicbs05_space-other_T1w_softseg_bin.json => sub-mpicbs05_space-other_T1w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-mpicbs05/anat/{sub-mpicbs05_space-other_T1w_softseg_bin.nii.gz => sub-mpicbs05_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-mpicbs05/anat/{sub-mpicbs05_space-other_T2star_softseg_bin.json => sub-mpicbs05_space-other_T2star_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-mpicbs05/anat/{sub-mpicbs05_space-other_T2star_softseg_bin.nii.gz => sub-mpicbs05_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-mpicbs05/anat/{sub-mpicbs05_space-other_T2w_softseg_bin.json => sub-mpicbs05_space-other_T2w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-mpicbs05/anat/{sub-mpicbs05_space-other_T2w_softseg_bin.nii.gz => sub-mpicbs05_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-mpicbs05/dwi/{sub-mpicbs05_rec-average_dwi_softseg_bin.json => sub-mpicbs05_rec-average_dwi_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-mpicbs05/dwi/{sub-mpicbs05_rec-average_dwi_softseg_bin.nii.gz => sub-mpicbs05_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-mpicbs06/anat/{sub-mpicbs06_flip-1_mt-on_space-other_MTS_softseg_bin.json => sub-mpicbs06_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-mpicbs06/anat/{sub-mpicbs06_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz => sub-mpicbs06_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-mpicbs06/anat/{sub-mpicbs06_flip-2_mt-off_space-other_MTS_softseg_bin.json => sub-mpicbs06_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-mpicbs06/anat/{sub-mpicbs06_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz => sub-mpicbs06_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-mpicbs06/anat/{sub-mpicbs06_space-other_T1w_softseg_bin.json => sub-mpicbs06_space-other_T1w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-mpicbs06/anat/{sub-mpicbs06_space-other_T1w_softseg_bin.nii.gz => sub-mpicbs06_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-mpicbs06/anat/{sub-mpicbs06_space-other_T2star_softseg_bin.json => sub-mpicbs06_space-other_T2star_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-mpicbs06/anat/{sub-mpicbs06_space-other_T2star_softseg_bin.nii.gz => sub-mpicbs06_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-mpicbs06/anat/{sub-mpicbs06_space-other_T2w_softseg_bin.json => sub-mpicbs06_space-other_T2w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-mpicbs06/anat/{sub-mpicbs06_space-other_T2w_softseg_bin.nii.gz => sub-mpicbs06_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-mpicbs06/dwi/{sub-mpicbs06_rec-average_dwi_softseg_bin.json => sub-mpicbs06_rec-average_dwi_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-mpicbs06/dwi/{sub-mpicbs06_rec-average_dwi_softseg_bin.nii.gz => sub-mpicbs06_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-mpicbs07/anat/{sub-mpicbs07_flip-1_mt-on_space-other_MTS_softseg_bin.json => sub-mpicbs07_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-mpicbs07/anat/{sub-mpicbs07_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz => sub-mpicbs07_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-mpicbs07/anat/{sub-mpicbs07_flip-2_mt-off_space-other_MTS_softseg_bin.json => sub-mpicbs07_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-mpicbs07/anat/{sub-mpicbs07_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz => sub-mpicbs07_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-mpicbs07/anat/{sub-mpicbs07_space-other_T1w_softseg_bin.json => sub-mpicbs07_space-other_T1w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-mpicbs07/anat/{sub-mpicbs07_space-other_T1w_softseg_bin.nii.gz => sub-mpicbs07_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-mpicbs07/anat/{sub-mpicbs07_space-other_T2star_softseg_bin.json => sub-mpicbs07_space-other_T2star_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-mpicbs07/anat/{sub-mpicbs07_space-other_T2star_softseg_bin.nii.gz => sub-mpicbs07_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-mpicbs07/anat/{sub-mpicbs07_space-other_T2w_softseg_bin.json => sub-mpicbs07_space-other_T2w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-mpicbs07/anat/{sub-mpicbs07_space-other_T2w_softseg_bin.nii.gz => sub-mpicbs07_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-mpicbs07/dwi/{sub-mpicbs07_rec-average_dwi_softseg_bin.json => sub-mpicbs07_rec-average_dwi_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-mpicbs07/dwi/{sub-mpicbs07_rec-average_dwi_softseg_bin.nii.gz => sub-mpicbs07_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-nottwil01/anat/{sub-nottwil01_flip-1_mt-on_space-other_MTS_softseg_bin.json => sub-nottwil01_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-nottwil01/anat/{sub-nottwil01_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz => sub-nottwil01_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-nottwil01/anat/{sub-nottwil01_flip-2_mt-off_space-other_MTS_softseg_bin.json => sub-nottwil01_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-nottwil01/anat/{sub-nottwil01_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz => sub-nottwil01_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-nottwil01/anat/{sub-nottwil01_space-other_T1w_softseg_bin.json => sub-nottwil01_space-other_T1w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-nottwil01/anat/{sub-nottwil01_space-other_T1w_softseg_bin.nii.gz => sub-nottwil01_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-nottwil01/anat/{sub-nottwil01_space-other_T2star_softseg_bin.json => sub-nottwil01_space-other_T2star_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-nottwil01/anat/{sub-nottwil01_space-other_T2star_softseg_bin.nii.gz => sub-nottwil01_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-nottwil01/anat/{sub-nottwil01_space-other_T2w_softseg_bin.json => sub-nottwil01_space-other_T2w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-nottwil01/anat/{sub-nottwil01_space-other_T2w_softseg_bin.nii.gz => sub-nottwil01_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-nottwil01/dwi/{sub-nottwil01_rec-average_dwi_softseg_bin.json => sub-nottwil01_rec-average_dwi_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-nottwil01/dwi/{sub-nottwil01_rec-average_dwi_softseg_bin.nii.gz => sub-nottwil01_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-nottwil02/anat/{sub-nottwil02_flip-1_mt-on_space-other_MTS_softseg_bin.json => sub-nottwil02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-nottwil02/anat/{sub-nottwil02_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz => sub-nottwil02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-nottwil02/anat/{sub-nottwil02_flip-2_mt-off_space-other_MTS_softseg_bin.json => sub-nottwil02_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-nottwil02/anat/{sub-nottwil02_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz => sub-nottwil02_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-nottwil02/anat/{sub-nottwil02_space-other_T1w_softseg_bin.json => sub-nottwil02_space-other_T1w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-nottwil02/anat/{sub-nottwil02_space-other_T1w_softseg_bin.nii.gz => sub-nottwil02_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-nottwil02/anat/{sub-nottwil02_space-other_T2star_softseg_bin.json => sub-nottwil02_space-other_T2star_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-nottwil02/anat/{sub-nottwil02_space-other_T2star_softseg_bin.nii.gz => sub-nottwil02_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-nottwil02/anat/{sub-nottwil02_space-other_T2w_softseg_bin.json => sub-nottwil02_space-other_T2w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-nottwil02/anat/{sub-nottwil02_space-other_T2w_softseg_bin.nii.gz => sub-nottwil02_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-nottwil02/dwi/{sub-nottwil02_rec-average_dwi_softseg_bin.json => sub-nottwil02_rec-average_dwi_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-nottwil02/dwi/{sub-nottwil02_rec-average_dwi_softseg_bin.nii.gz => sub-nottwil02_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-nottwil03/anat/{sub-nottwil03_flip-1_mt-on_space-other_MTS_softseg_bin.json => sub-nottwil03_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-nottwil03/anat/{sub-nottwil03_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz => sub-nottwil03_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-nottwil03/anat/{sub-nottwil03_flip-2_mt-off_space-other_MTS_softseg_bin.json => sub-nottwil03_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-nottwil03/anat/{sub-nottwil03_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz => sub-nottwil03_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-nottwil03/anat/{sub-nottwil03_space-other_T1w_softseg_bin.json => sub-nottwil03_space-other_T1w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-nottwil03/anat/{sub-nottwil03_space-other_T1w_softseg_bin.nii.gz => sub-nottwil03_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-nottwil03/anat/{sub-nottwil03_space-other_T2star_softseg_bin.json => sub-nottwil03_space-other_T2star_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-nottwil03/anat/{sub-nottwil03_space-other_T2star_softseg_bin.nii.gz => sub-nottwil03_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-nottwil03/anat/{sub-nottwil03_space-other_T2w_softseg_bin.json => sub-nottwil03_space-other_T2w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-nottwil03/anat/{sub-nottwil03_space-other_T2w_softseg_bin.nii.gz => sub-nottwil03_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-nottwil03/dwi/{sub-nottwil03_rec-average_dwi_softseg_bin.json => sub-nottwil03_rec-average_dwi_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-nottwil03/dwi/{sub-nottwil03_rec-average_dwi_softseg_bin.nii.gz => sub-nottwil03_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-nottwil04/anat/{sub-nottwil04_flip-1_mt-on_space-other_MTS_softseg_bin.json => sub-nottwil04_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-nottwil04/anat/{sub-nottwil04_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz => sub-nottwil04_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-nottwil04/anat/{sub-nottwil04_flip-2_mt-off_space-other_MTS_softseg_bin.json => sub-nottwil04_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-nottwil04/anat/{sub-nottwil04_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz => sub-nottwil04_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-nottwil04/anat/{sub-nottwil04_space-other_T1w_softseg_bin.json => sub-nottwil04_space-other_T1w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-nottwil04/anat/{sub-nottwil04_space-other_T1w_softseg_bin.nii.gz => sub-nottwil04_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-nottwil04/anat/{sub-nottwil04_space-other_T2star_softseg_bin.json => sub-nottwil04_space-other_T2star_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-nottwil04/anat/{sub-nottwil04_space-other_T2star_softseg_bin.nii.gz => sub-nottwil04_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-nottwil04/anat/{sub-nottwil04_space-other_T2w_softseg_bin.json => sub-nottwil04_space-other_T2w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-nottwil04/anat/{sub-nottwil04_space-other_T2w_softseg_bin.nii.gz => sub-nottwil04_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-nottwil04/dwi/{sub-nottwil04_rec-average_dwi_softseg_bin.json => sub-nottwil04_rec-average_dwi_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-nottwil04/dwi/{sub-nottwil04_rec-average_dwi_softseg_bin.nii.gz => sub-nottwil04_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-nottwil05/anat/{sub-nottwil05_flip-1_mt-on_space-other_MTS_softseg_bin.json => sub-nottwil05_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-nottwil05/anat/{sub-nottwil05_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz => sub-nottwil05_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-nottwil05/anat/{sub-nottwil05_flip-2_mt-off_space-other_MTS_softseg_bin.json => sub-nottwil05_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-nottwil05/anat/{sub-nottwil05_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz => sub-nottwil05_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-nottwil05/anat/{sub-nottwil05_space-other_T1w_softseg_bin.json => sub-nottwil05_space-other_T1w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-nottwil05/anat/{sub-nottwil05_space-other_T1w_softseg_bin.nii.gz => sub-nottwil05_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-nottwil05/anat/{sub-nottwil05_space-other_T2star_softseg_bin.json => sub-nottwil05_space-other_T2star_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-nottwil05/anat/{sub-nottwil05_space-other_T2star_softseg_bin.nii.gz => sub-nottwil05_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-nottwil05/anat/{sub-nottwil05_space-other_T2w_softseg_bin.json => sub-nottwil05_space-other_T2w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-nottwil05/anat/{sub-nottwil05_space-other_T2w_softseg_bin.nii.gz => sub-nottwil05_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-nottwil05/dwi/{sub-nottwil05_rec-average_dwi_softseg_bin.json => sub-nottwil05_rec-average_dwi_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-nottwil05/dwi/{sub-nottwil05_rec-average_dwi_softseg_bin.nii.gz => sub-nottwil05_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-nottwil06/anat/{sub-nottwil06_flip-1_mt-on_space-other_MTS_softseg_bin.json => sub-nottwil06_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-nottwil06/anat/{sub-nottwil06_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz => sub-nottwil06_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-nottwil06/anat/{sub-nottwil06_flip-2_mt-off_space-other_MTS_softseg_bin.json => sub-nottwil06_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-nottwil06/anat/{sub-nottwil06_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz => sub-nottwil06_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-nottwil06/anat/{sub-nottwil06_space-other_T1w_softseg_bin.json => sub-nottwil06_space-other_T1w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-nottwil06/anat/{sub-nottwil06_space-other_T1w_softseg_bin.nii.gz => sub-nottwil06_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-nottwil06/anat/{sub-nottwil06_space-other_T2star_softseg_bin.json => sub-nottwil06_space-other_T2star_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-nottwil06/anat/{sub-nottwil06_space-other_T2star_softseg_bin.nii.gz => sub-nottwil06_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-nottwil06/anat/{sub-nottwil06_space-other_T2w_softseg_bin.json => sub-nottwil06_space-other_T2w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-nottwil06/anat/{sub-nottwil06_space-other_T2w_softseg_bin.nii.gz => sub-nottwil06_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-nottwil06/dwi/{sub-nottwil06_rec-average_dwi_softseg_bin.json => sub-nottwil06_rec-average_dwi_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-nottwil06/dwi/{sub-nottwil06_rec-average_dwi_softseg_bin.nii.gz => sub-nottwil06_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-nwu01/anat/{sub-nwu01_flip-1_mt-on_space-other_MTS_softseg_bin.json => sub-nwu01_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-nwu01/anat/{sub-nwu01_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz => sub-nwu01_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-nwu01/anat/{sub-nwu01_flip-2_mt-off_space-other_MTS_softseg_bin.json => sub-nwu01_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-nwu01/anat/{sub-nwu01_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz => sub-nwu01_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-nwu01/anat/{sub-nwu01_space-other_T1w_softseg_bin.json => sub-nwu01_space-other_T1w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-nwu01/anat/{sub-nwu01_space-other_T1w_softseg_bin.nii.gz => sub-nwu01_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-nwu01/anat/{sub-nwu01_space-other_T2star_softseg_bin.json => sub-nwu01_space-other_T2star_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-nwu01/anat/{sub-nwu01_space-other_T2star_softseg_bin.nii.gz => sub-nwu01_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-nwu01/anat/{sub-nwu01_space-other_T2w_softseg_bin.json => sub-nwu01_space-other_T2w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-nwu01/anat/{sub-nwu01_space-other_T2w_softseg_bin.nii.gz => sub-nwu01_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-nwu01/dwi/{sub-nwu01_rec-average_dwi_softseg_bin.json => sub-nwu01_rec-average_dwi_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-nwu01/dwi/{sub-nwu01_rec-average_dwi_softseg_bin.nii.gz => sub-nwu01_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-nwu02/anat/{sub-nwu02_flip-1_mt-on_space-other_MTS_softseg_bin.json => sub-nwu02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-nwu02/anat/{sub-nwu02_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz => sub-nwu02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-nwu02/anat/{sub-nwu02_flip-2_mt-off_space-other_MTS_softseg_bin.json => sub-nwu02_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-nwu02/anat/{sub-nwu02_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz => sub-nwu02_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-nwu02/anat/{sub-nwu02_space-other_T1w_softseg_bin.json => sub-nwu02_space-other_T1w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-nwu02/anat/{sub-nwu02_space-other_T1w_softseg_bin.nii.gz => sub-nwu02_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-nwu02/anat/{sub-nwu02_space-other_T2star_softseg_bin.json => sub-nwu02_space-other_T2star_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-nwu02/anat/{sub-nwu02_space-other_T2star_softseg_bin.nii.gz => sub-nwu02_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-nwu02/anat/{sub-nwu02_space-other_T2w_softseg_bin.json => sub-nwu02_space-other_T2w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-nwu02/anat/{sub-nwu02_space-other_T2w_softseg_bin.nii.gz => sub-nwu02_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-nwu02/dwi/{sub-nwu02_rec-average_dwi_softseg_bin.json => sub-nwu02_rec-average_dwi_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-nwu02/dwi/{sub-nwu02_rec-average_dwi_softseg_bin.nii.gz => sub-nwu02_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-nwu03/anat/{sub-nwu03_flip-1_mt-on_space-other_MTS_softseg_bin.json => sub-nwu03_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-nwu03/anat/{sub-nwu03_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz => sub-nwu03_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-nwu03/anat/{sub-nwu03_flip-2_mt-off_space-other_MTS_softseg_bin.json => sub-nwu03_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-nwu03/anat/{sub-nwu03_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz => sub-nwu03_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-nwu03/anat/{sub-nwu03_space-other_T1w_softseg_bin.json => sub-nwu03_space-other_T1w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-nwu03/anat/{sub-nwu03_space-other_T1w_softseg_bin.nii.gz => sub-nwu03_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-nwu03/anat/{sub-nwu03_space-other_T2star_softseg_bin.json => sub-nwu03_space-other_T2star_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-nwu03/anat/{sub-nwu03_space-other_T2star_softseg_bin.nii.gz => sub-nwu03_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-nwu03/anat/{sub-nwu03_space-other_T2w_softseg_bin.json => sub-nwu03_space-other_T2w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-nwu03/anat/{sub-nwu03_space-other_T2w_softseg_bin.nii.gz => sub-nwu03_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-nwu03/dwi/{sub-nwu03_rec-average_dwi_softseg_bin.json => sub-nwu03_rec-average_dwi_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-nwu03/dwi/{sub-nwu03_rec-average_dwi_softseg_bin.nii.gz => sub-nwu03_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-nwu04/anat/{sub-nwu04_flip-1_mt-on_space-other_MTS_softseg_bin.json => sub-nwu04_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-nwu04/anat/{sub-nwu04_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz => sub-nwu04_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-nwu04/anat/{sub-nwu04_flip-2_mt-off_space-other_MTS_softseg_bin.json => sub-nwu04_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-nwu04/anat/{sub-nwu04_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz => sub-nwu04_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-nwu04/anat/{sub-nwu04_space-other_T1w_softseg_bin.json => sub-nwu04_space-other_T1w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-nwu04/anat/{sub-nwu04_space-other_T1w_softseg_bin.nii.gz => sub-nwu04_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-nwu04/anat/{sub-nwu04_space-other_T2star_softseg_bin.json => sub-nwu04_space-other_T2star_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-nwu04/anat/{sub-nwu04_space-other_T2star_softseg_bin.nii.gz => sub-nwu04_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-nwu04/anat/{sub-nwu04_space-other_T2w_softseg_bin.json => sub-nwu04_space-other_T2w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-nwu04/anat/{sub-nwu04_space-other_T2w_softseg_bin.nii.gz => sub-nwu04_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-nwu04/dwi/{sub-nwu04_rec-average_dwi_softseg_bin.json => sub-nwu04_rec-average_dwi_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-nwu04/dwi/{sub-nwu04_rec-average_dwi_softseg_bin.nii.gz => sub-nwu04_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-nwu05/anat/{sub-nwu05_flip-1_mt-on_space-other_MTS_softseg_bin.json => sub-nwu05_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-nwu05/anat/{sub-nwu05_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz => sub-nwu05_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-nwu05/anat/{sub-nwu05_flip-2_mt-off_space-other_MTS_softseg_bin.json => sub-nwu05_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-nwu05/anat/{sub-nwu05_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz => sub-nwu05_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-nwu05/anat/{sub-nwu05_space-other_T1w_softseg_bin.json => sub-nwu05_space-other_T1w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-nwu05/anat/{sub-nwu05_space-other_T1w_softseg_bin.nii.gz => sub-nwu05_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-nwu05/anat/{sub-nwu05_space-other_T2star_softseg_bin.json => sub-nwu05_space-other_T2star_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-nwu05/anat/{sub-nwu05_space-other_T2star_softseg_bin.nii.gz => sub-nwu05_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-nwu05/anat/{sub-nwu05_space-other_T2w_softseg_bin.json => sub-nwu05_space-other_T2w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-nwu05/anat/{sub-nwu05_space-other_T2w_softseg_bin.nii.gz => sub-nwu05_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-nwu05/dwi/{sub-nwu05_rec-average_dwi_softseg_bin.json => sub-nwu05_rec-average_dwi_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-nwu05/dwi/{sub-nwu05_rec-average_dwi_softseg_bin.nii.gz => sub-nwu05_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-nwu06/anat/{sub-nwu06_flip-1_mt-on_space-other_MTS_softseg_bin.json => sub-nwu06_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-nwu06/anat/{sub-nwu06_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz => sub-nwu06_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-nwu06/anat/{sub-nwu06_flip-2_mt-off_space-other_MTS_softseg_bin.json => sub-nwu06_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-nwu06/anat/{sub-nwu06_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz => sub-nwu06_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-nwu06/anat/{sub-nwu06_space-other_T1w_softseg_bin.json => sub-nwu06_space-other_T1w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-nwu06/anat/{sub-nwu06_space-other_T1w_softseg_bin.nii.gz => sub-nwu06_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-nwu06/anat/{sub-nwu06_space-other_T2star_softseg_bin.json => sub-nwu06_space-other_T2star_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-nwu06/anat/{sub-nwu06_space-other_T2star_softseg_bin.nii.gz => sub-nwu06_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-nwu06/anat/{sub-nwu06_space-other_T2w_softseg_bin.json => sub-nwu06_space-other_T2w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-nwu06/anat/{sub-nwu06_space-other_T2w_softseg_bin.nii.gz => sub-nwu06_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-nwu06/dwi/{sub-nwu06_rec-average_dwi_softseg_bin.json => sub-nwu06_rec-average_dwi_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-nwu06/dwi/{sub-nwu06_rec-average_dwi_softseg_bin.nii.gz => sub-nwu06_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-oxfordFmrib02/anat/{sub-oxfordFmrib02_flip-1_mt-on_space-other_MTS_softseg_bin.json => sub-oxfordFmrib02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-oxfordFmrib02/anat/{sub-oxfordFmrib02_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz => sub-oxfordFmrib02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-oxfordFmrib02/anat/{sub-oxfordFmrib02_flip-2_mt-off_space-other_MTS_softseg_bin.json => sub-oxfordFmrib02_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-oxfordFmrib02/anat/{sub-oxfordFmrib02_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz => sub-oxfordFmrib02_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-oxfordFmrib02/anat/{sub-oxfordFmrib02_space-other_T1w_softseg_bin.json => sub-oxfordFmrib02_space-other_T1w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-oxfordFmrib02/anat/{sub-oxfordFmrib02_space-other_T1w_softseg_bin.nii.gz => sub-oxfordFmrib02_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-oxfordFmrib02/anat/{sub-oxfordFmrib02_space-other_T2star_softseg_bin.json => sub-oxfordFmrib02_space-other_T2star_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-oxfordFmrib02/anat/{sub-oxfordFmrib02_space-other_T2star_softseg_bin.nii.gz => sub-oxfordFmrib02_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-oxfordFmrib02/anat/{sub-oxfordFmrib02_space-other_T2w_softseg_bin.json => sub-oxfordFmrib02_space-other_T2w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-oxfordFmrib02/anat/{sub-oxfordFmrib02_space-other_T2w_softseg_bin.nii.gz => sub-oxfordFmrib02_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-oxfordFmrib02/dwi/{sub-oxfordFmrib02_rec-average_dwi_softseg_bin.json => sub-oxfordFmrib02_rec-average_dwi_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-oxfordFmrib02/dwi/{sub-oxfordFmrib02_rec-average_dwi_softseg_bin.nii.gz => sub-oxfordFmrib02_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-oxfordFmrib03/anat/{sub-oxfordFmrib03_flip-1_mt-on_space-other_MTS_softseg_bin.json => sub-oxfordFmrib03_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-oxfordFmrib03/anat/{sub-oxfordFmrib03_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz => sub-oxfordFmrib03_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-oxfordFmrib03/anat/{sub-oxfordFmrib03_flip-2_mt-off_space-other_MTS_softseg_bin.json => sub-oxfordFmrib03_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-oxfordFmrib03/anat/{sub-oxfordFmrib03_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz => sub-oxfordFmrib03_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-oxfordFmrib03/anat/{sub-oxfordFmrib03_space-other_T1w_softseg_bin.json => sub-oxfordFmrib03_space-other_T1w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-oxfordFmrib03/anat/{sub-oxfordFmrib03_space-other_T1w_softseg_bin.nii.gz => sub-oxfordFmrib03_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-oxfordFmrib03/anat/{sub-oxfordFmrib03_space-other_T2star_softseg_bin.json => sub-oxfordFmrib03_space-other_T2star_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-oxfordFmrib03/anat/{sub-oxfordFmrib03_space-other_T2star_softseg_bin.nii.gz => sub-oxfordFmrib03_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-oxfordFmrib03/anat/{sub-oxfordFmrib03_space-other_T2w_softseg_bin.json => sub-oxfordFmrib03_space-other_T2w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-oxfordFmrib03/anat/{sub-oxfordFmrib03_space-other_T2w_softseg_bin.nii.gz => sub-oxfordFmrib03_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-oxfordFmrib03/dwi/{sub-oxfordFmrib03_rec-average_dwi_softseg_bin.json => sub-oxfordFmrib03_rec-average_dwi_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-oxfordFmrib03/dwi/{sub-oxfordFmrib03_rec-average_dwi_softseg_bin.nii.gz => sub-oxfordFmrib03_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-oxfordFmrib05/anat/{sub-oxfordFmrib05_flip-1_mt-on_space-other_MTS_softseg_bin.json => sub-oxfordFmrib05_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-oxfordFmrib05/anat/{sub-oxfordFmrib05_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz => sub-oxfordFmrib05_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-oxfordFmrib05/anat/{sub-oxfordFmrib05_flip-2_mt-off_space-other_MTS_softseg_bin.json => sub-oxfordFmrib05_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-oxfordFmrib05/anat/{sub-oxfordFmrib05_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz => sub-oxfordFmrib05_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-oxfordFmrib05/anat/{sub-oxfordFmrib05_space-other_T1w_softseg_bin.json => sub-oxfordFmrib05_space-other_T1w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-oxfordFmrib05/anat/{sub-oxfordFmrib05_space-other_T1w_softseg_bin.nii.gz => sub-oxfordFmrib05_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-oxfordFmrib05/anat/{sub-oxfordFmrib05_space-other_T2star_softseg_bin.json => sub-oxfordFmrib05_space-other_T2star_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-oxfordFmrib05/anat/{sub-oxfordFmrib05_space-other_T2star_softseg_bin.nii.gz => sub-oxfordFmrib05_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-oxfordFmrib05/anat/{sub-oxfordFmrib05_space-other_T2w_softseg_bin.json => sub-oxfordFmrib05_space-other_T2w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-oxfordFmrib05/anat/{sub-oxfordFmrib05_space-other_T2w_softseg_bin.nii.gz => sub-oxfordFmrib05_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-oxfordFmrib05/dwi/{sub-oxfordFmrib05_rec-average_dwi_softseg_bin.json => sub-oxfordFmrib05_rec-average_dwi_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-oxfordFmrib05/dwi/{sub-oxfordFmrib05_rec-average_dwi_softseg_bin.nii.gz => sub-oxfordFmrib05_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-oxfordFmrib06/anat/{sub-oxfordFmrib06_flip-1_mt-on_space-other_MTS_softseg_bin.json => sub-oxfordFmrib06_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-oxfordFmrib06/anat/{sub-oxfordFmrib06_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz => sub-oxfordFmrib06_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-oxfordFmrib06/anat/{sub-oxfordFmrib06_flip-2_mt-off_space-other_MTS_softseg_bin.json => sub-oxfordFmrib06_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-oxfordFmrib06/anat/{sub-oxfordFmrib06_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz => sub-oxfordFmrib06_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-oxfordFmrib06/anat/{sub-oxfordFmrib06_space-other_T1w_softseg_bin.json => sub-oxfordFmrib06_space-other_T1w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-oxfordFmrib06/anat/{sub-oxfordFmrib06_space-other_T1w_softseg_bin.nii.gz => sub-oxfordFmrib06_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-oxfordFmrib06/anat/{sub-oxfordFmrib06_space-other_T2star_softseg_bin.json => sub-oxfordFmrib06_space-other_T2star_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-oxfordFmrib06/anat/{sub-oxfordFmrib06_space-other_T2star_softseg_bin.nii.gz => sub-oxfordFmrib06_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-oxfordFmrib06/anat/{sub-oxfordFmrib06_space-other_T2w_softseg_bin.json => sub-oxfordFmrib06_space-other_T2w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-oxfordFmrib06/anat/{sub-oxfordFmrib06_space-other_T2w_softseg_bin.nii.gz => sub-oxfordFmrib06_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-oxfordFmrib06/dwi/{sub-oxfordFmrib06_rec-average_dwi_softseg_bin.json => sub-oxfordFmrib06_rec-average_dwi_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-oxfordFmrib06/dwi/{sub-oxfordFmrib06_rec-average_dwi_softseg_bin.nii.gz => sub-oxfordFmrib06_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-oxfordFmrib07/anat/{sub-oxfordFmrib07_flip-1_mt-on_space-other_MTS_softseg_bin.json => sub-oxfordFmrib07_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-oxfordFmrib07/anat/{sub-oxfordFmrib07_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz => sub-oxfordFmrib07_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-oxfordFmrib07/anat/{sub-oxfordFmrib07_flip-2_mt-off_space-other_MTS_softseg_bin.json => sub-oxfordFmrib07_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-oxfordFmrib07/anat/{sub-oxfordFmrib07_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz => sub-oxfordFmrib07_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-oxfordFmrib07/anat/{sub-oxfordFmrib07_space-other_T1w_softseg_bin.json => sub-oxfordFmrib07_space-other_T1w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-oxfordFmrib07/anat/{sub-oxfordFmrib07_space-other_T1w_softseg_bin.nii.gz => sub-oxfordFmrib07_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-oxfordFmrib07/anat/{sub-oxfordFmrib07_space-other_T2star_softseg_bin.json => sub-oxfordFmrib07_space-other_T2star_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-oxfordFmrib07/anat/{sub-oxfordFmrib07_space-other_T2star_softseg_bin.nii.gz => sub-oxfordFmrib07_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-oxfordFmrib07/anat/{sub-oxfordFmrib07_space-other_T2w_softseg_bin.json => sub-oxfordFmrib07_space-other_T2w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-oxfordFmrib07/anat/{sub-oxfordFmrib07_space-other_T2w_softseg_bin.nii.gz => sub-oxfordFmrib07_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-oxfordFmrib07/dwi/{sub-oxfordFmrib07_rec-average_dwi_softseg_bin.json => sub-oxfordFmrib07_rec-average_dwi_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-oxfordFmrib07/dwi/{sub-oxfordFmrib07_rec-average_dwi_softseg_bin.nii.gz => sub-oxfordFmrib07_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-oxfordFmrib08/anat/{sub-oxfordFmrib08_flip-1_mt-on_space-other_MTS_softseg_bin.json => sub-oxfordFmrib08_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-oxfordFmrib08/anat/{sub-oxfordFmrib08_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz => sub-oxfordFmrib08_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-oxfordFmrib08/anat/{sub-oxfordFmrib08_flip-2_mt-off_space-other_MTS_softseg_bin.json => sub-oxfordFmrib08_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-oxfordFmrib08/anat/{sub-oxfordFmrib08_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz => sub-oxfordFmrib08_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-oxfordFmrib08/anat/{sub-oxfordFmrib08_space-other_T1w_softseg_bin.json => sub-oxfordFmrib08_space-other_T1w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-oxfordFmrib08/anat/{sub-oxfordFmrib08_space-other_T1w_softseg_bin.nii.gz => sub-oxfordFmrib08_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-oxfordFmrib08/anat/{sub-oxfordFmrib08_space-other_T2star_softseg_bin.json => sub-oxfordFmrib08_space-other_T2star_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-oxfordFmrib08/anat/{sub-oxfordFmrib08_space-other_T2star_softseg_bin.nii.gz => sub-oxfordFmrib08_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-oxfordFmrib08/anat/{sub-oxfordFmrib08_space-other_T2w_softseg_bin.json => sub-oxfordFmrib08_space-other_T2w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-oxfordFmrib08/anat/{sub-oxfordFmrib08_space-other_T2w_softseg_bin.nii.gz => sub-oxfordFmrib08_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-oxfordFmrib08/dwi/{sub-oxfordFmrib08_rec-average_dwi_softseg_bin.json => sub-oxfordFmrib08_rec-average_dwi_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-oxfordFmrib08/dwi/{sub-oxfordFmrib08_rec-average_dwi_softseg_bin.nii.gz => sub-oxfordFmrib08_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-oxfordFmrib09/anat/{sub-oxfordFmrib09_flip-1_mt-on_space-other_MTS_softseg_bin.json => sub-oxfordFmrib09_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-oxfordFmrib09/anat/{sub-oxfordFmrib09_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz => sub-oxfordFmrib09_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-oxfordFmrib09/anat/{sub-oxfordFmrib09_flip-2_mt-off_space-other_MTS_softseg_bin.json => sub-oxfordFmrib09_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-oxfordFmrib09/anat/{sub-oxfordFmrib09_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz => sub-oxfordFmrib09_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-oxfordFmrib09/anat/{sub-oxfordFmrib09_space-other_T1w_softseg_bin.json => sub-oxfordFmrib09_space-other_T1w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-oxfordFmrib09/anat/{sub-oxfordFmrib09_space-other_T1w_softseg_bin.nii.gz => sub-oxfordFmrib09_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-oxfordFmrib09/anat/{sub-oxfordFmrib09_space-other_T2star_softseg_bin.json => sub-oxfordFmrib09_space-other_T2star_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-oxfordFmrib09/anat/{sub-oxfordFmrib09_space-other_T2star_softseg_bin.nii.gz => sub-oxfordFmrib09_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-oxfordFmrib09/anat/{sub-oxfordFmrib09_space-other_T2w_softseg_bin.json => sub-oxfordFmrib09_space-other_T2w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-oxfordFmrib09/anat/{sub-oxfordFmrib09_space-other_T2w_softseg_bin.nii.gz => sub-oxfordFmrib09_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-oxfordFmrib09/dwi/{sub-oxfordFmrib09_rec-average_dwi_softseg_bin.json => sub-oxfordFmrib09_rec-average_dwi_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-oxfordFmrib09/dwi/{sub-oxfordFmrib09_rec-average_dwi_softseg_bin.nii.gz => sub-oxfordFmrib09_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-oxfordFmrib10/anat/{sub-oxfordFmrib10_flip-1_mt-on_space-other_MTS_softseg_bin.json => sub-oxfordFmrib10_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-oxfordFmrib10/anat/{sub-oxfordFmrib10_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz => sub-oxfordFmrib10_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-oxfordFmrib10/anat/{sub-oxfordFmrib10_flip-2_mt-off_space-other_MTS_softseg_bin.json => sub-oxfordFmrib10_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-oxfordFmrib10/anat/{sub-oxfordFmrib10_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz => sub-oxfordFmrib10_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-oxfordFmrib10/anat/{sub-oxfordFmrib10_space-other_T1w_softseg_bin.json => sub-oxfordFmrib10_space-other_T1w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-oxfordFmrib10/anat/{sub-oxfordFmrib10_space-other_T1w_softseg_bin.nii.gz => sub-oxfordFmrib10_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-oxfordFmrib10/anat/{sub-oxfordFmrib10_space-other_T2star_softseg_bin.json => sub-oxfordFmrib10_space-other_T2star_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-oxfordFmrib10/anat/{sub-oxfordFmrib10_space-other_T2star_softseg_bin.nii.gz => sub-oxfordFmrib10_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-oxfordFmrib10/anat/{sub-oxfordFmrib10_space-other_T2w_softseg_bin.json => sub-oxfordFmrib10_space-other_T2w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-oxfordFmrib10/anat/{sub-oxfordFmrib10_space-other_T2w_softseg_bin.nii.gz => sub-oxfordFmrib10_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-oxfordFmrib10/dwi/{sub-oxfordFmrib10_rec-average_dwi_softseg_bin.json => sub-oxfordFmrib10_rec-average_dwi_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-oxfordFmrib10/dwi/{sub-oxfordFmrib10_rec-average_dwi_softseg_bin.nii.gz => sub-oxfordFmrib10_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-oxfordFmrib11/anat/{sub-oxfordFmrib11_flip-1_mt-on_space-other_MTS_softseg_bin.json => sub-oxfordFmrib11_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-oxfordFmrib11/anat/{sub-oxfordFmrib11_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz => sub-oxfordFmrib11_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-oxfordFmrib11/anat/{sub-oxfordFmrib11_flip-2_mt-off_space-other_MTS_softseg_bin.json => sub-oxfordFmrib11_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-oxfordFmrib11/anat/{sub-oxfordFmrib11_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz => sub-oxfordFmrib11_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-oxfordFmrib11/anat/{sub-oxfordFmrib11_space-other_T1w_softseg_bin.json => sub-oxfordFmrib11_space-other_T1w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-oxfordFmrib11/anat/{sub-oxfordFmrib11_space-other_T1w_softseg_bin.nii.gz => sub-oxfordFmrib11_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-oxfordFmrib11/anat/{sub-oxfordFmrib11_space-other_T2star_softseg_bin.json => sub-oxfordFmrib11_space-other_T2star_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-oxfordFmrib11/anat/{sub-oxfordFmrib11_space-other_T2star_softseg_bin.nii.gz => sub-oxfordFmrib11_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-oxfordFmrib11/anat/{sub-oxfordFmrib11_space-other_T2w_softseg_bin.json => sub-oxfordFmrib11_space-other_T2w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-oxfordFmrib11/anat/{sub-oxfordFmrib11_space-other_T2w_softseg_bin.nii.gz => sub-oxfordFmrib11_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-oxfordFmrib11/dwi/{sub-oxfordFmrib11_rec-average_dwi_softseg_bin.json => sub-oxfordFmrib11_rec-average_dwi_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-oxfordFmrib11/dwi/{sub-oxfordFmrib11_rec-average_dwi_softseg_bin.nii.gz => sub-oxfordFmrib11_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-oxfordOhba01/anat/{sub-oxfordOhba01_flip-1_mt-on_space-other_MTS_softseg_bin.json => sub-oxfordOhba01_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-oxfordOhba01/anat/{sub-oxfordOhba01_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz => sub-oxfordOhba01_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-oxfordOhba01/anat/{sub-oxfordOhba01_flip-2_mt-off_space-other_MTS_softseg_bin.json => sub-oxfordOhba01_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-oxfordOhba01/anat/{sub-oxfordOhba01_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz => sub-oxfordOhba01_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-oxfordOhba01/anat/{sub-oxfordOhba01_space-other_T1w_softseg_bin.json => sub-oxfordOhba01_space-other_T1w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-oxfordOhba01/anat/{sub-oxfordOhba01_space-other_T1w_softseg_bin.nii.gz => sub-oxfordOhba01_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-oxfordOhba01/anat/{sub-oxfordOhba01_space-other_T2star_softseg_bin.json => sub-oxfordOhba01_space-other_T2star_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-oxfordOhba01/anat/{sub-oxfordOhba01_space-other_T2star_softseg_bin.nii.gz => sub-oxfordOhba01_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-oxfordOhba01/anat/{sub-oxfordOhba01_space-other_T2w_softseg_bin.json => sub-oxfordOhba01_space-other_T2w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-oxfordOhba01/anat/{sub-oxfordOhba01_space-other_T2w_softseg_bin.nii.gz => sub-oxfordOhba01_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-oxfordOhba01/dwi/{sub-oxfordOhba01_rec-average_dwi_softseg_bin.json => sub-oxfordOhba01_rec-average_dwi_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-oxfordOhba01/dwi/{sub-oxfordOhba01_rec-average_dwi_softseg_bin.nii.gz => sub-oxfordOhba01_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-oxfordOhba03/anat/{sub-oxfordOhba03_flip-1_mt-on_space-other_MTS_softseg_bin.json => sub-oxfordOhba03_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-oxfordOhba03/anat/{sub-oxfordOhba03_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz => sub-oxfordOhba03_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-oxfordOhba03/anat/{sub-oxfordOhba03_flip-2_mt-off_space-other_MTS_softseg_bin.json => sub-oxfordOhba03_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-oxfordOhba03/anat/{sub-oxfordOhba03_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz => sub-oxfordOhba03_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-oxfordOhba03/anat/{sub-oxfordOhba03_space-other_T1w_softseg_bin.json => sub-oxfordOhba03_space-other_T1w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-oxfordOhba03/anat/{sub-oxfordOhba03_space-other_T1w_softseg_bin.nii.gz => sub-oxfordOhba03_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-oxfordOhba03/anat/{sub-oxfordOhba03_space-other_T2star_softseg_bin.json => sub-oxfordOhba03_space-other_T2star_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-oxfordOhba03/anat/{sub-oxfordOhba03_space-other_T2star_softseg_bin.nii.gz => sub-oxfordOhba03_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-oxfordOhba03/anat/{sub-oxfordOhba03_space-other_T2w_softseg_bin.json => sub-oxfordOhba03_space-other_T2w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-oxfordOhba03/anat/{sub-oxfordOhba03_space-other_T2w_softseg_bin.nii.gz => sub-oxfordOhba03_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-oxfordOhba03/dwi/{sub-oxfordOhba03_rec-average_dwi_softseg_bin.json => sub-oxfordOhba03_rec-average_dwi_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-oxfordOhba03/dwi/{sub-oxfordOhba03_rec-average_dwi_softseg_bin.nii.gz => sub-oxfordOhba03_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-oxfordOhba04/anat/{sub-oxfordOhba04_flip-1_mt-on_space-other_MTS_softseg_bin.json => sub-oxfordOhba04_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-oxfordOhba04/anat/{sub-oxfordOhba04_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz => sub-oxfordOhba04_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-oxfordOhba04/anat/{sub-oxfordOhba04_flip-2_mt-off_space-other_MTS_softseg_bin.json => sub-oxfordOhba04_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-oxfordOhba04/anat/{sub-oxfordOhba04_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz => sub-oxfordOhba04_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-oxfordOhba04/anat/{sub-oxfordOhba04_space-other_T1w_softseg_bin.json => sub-oxfordOhba04_space-other_T1w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-oxfordOhba04/anat/{sub-oxfordOhba04_space-other_T1w_softseg_bin.nii.gz => sub-oxfordOhba04_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-oxfordOhba04/anat/{sub-oxfordOhba04_space-other_T2star_softseg_bin.json => sub-oxfordOhba04_space-other_T2star_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-oxfordOhba04/anat/{sub-oxfordOhba04_space-other_T2star_softseg_bin.nii.gz => sub-oxfordOhba04_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-oxfordOhba04/anat/{sub-oxfordOhba04_space-other_T2w_softseg_bin.json => sub-oxfordOhba04_space-other_T2w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-oxfordOhba04/anat/{sub-oxfordOhba04_space-other_T2w_softseg_bin.nii.gz => sub-oxfordOhba04_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-oxfordOhba04/dwi/{sub-oxfordOhba04_rec-average_dwi_softseg_bin.json => sub-oxfordOhba04_rec-average_dwi_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-oxfordOhba04/dwi/{sub-oxfordOhba04_rec-average_dwi_softseg_bin.nii.gz => sub-oxfordOhba04_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-oxfordOhba05/anat/{sub-oxfordOhba05_flip-1_mt-on_space-other_MTS_softseg_bin.json => sub-oxfordOhba05_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-oxfordOhba05/anat/{sub-oxfordOhba05_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz => sub-oxfordOhba05_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-oxfordOhba05/anat/{sub-oxfordOhba05_flip-2_mt-off_space-other_MTS_softseg_bin.json => sub-oxfordOhba05_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-oxfordOhba05/anat/{sub-oxfordOhba05_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz => sub-oxfordOhba05_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-oxfordOhba05/anat/{sub-oxfordOhba05_space-other_T1w_softseg_bin.json => sub-oxfordOhba05_space-other_T1w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-oxfordOhba05/anat/{sub-oxfordOhba05_space-other_T1w_softseg_bin.nii.gz => sub-oxfordOhba05_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-oxfordOhba05/anat/{sub-oxfordOhba05_space-other_T2star_softseg_bin.json => sub-oxfordOhba05_space-other_T2star_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-oxfordOhba05/anat/{sub-oxfordOhba05_space-other_T2star_softseg_bin.nii.gz => sub-oxfordOhba05_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-oxfordOhba05/anat/{sub-oxfordOhba05_space-other_T2w_softseg_bin.json => sub-oxfordOhba05_space-other_T2w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-oxfordOhba05/anat/{sub-oxfordOhba05_space-other_T2w_softseg_bin.nii.gz => sub-oxfordOhba05_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-oxfordOhba05/dwi/{sub-oxfordOhba05_rec-average_dwi_softseg_bin.json => sub-oxfordOhba05_rec-average_dwi_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-oxfordOhba05/dwi/{sub-oxfordOhba05_rec-average_dwi_softseg_bin.nii.gz => sub-oxfordOhba05_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-pavia01/anat/{sub-pavia01_flip-1_mt-on_space-other_MTS_softseg_bin.json => sub-pavia01_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-pavia01/anat/{sub-pavia01_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz => sub-pavia01_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-pavia01/anat/{sub-pavia01_flip-2_mt-off_space-other_MTS_softseg_bin.json => sub-pavia01_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-pavia01/anat/{sub-pavia01_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz => sub-pavia01_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-pavia01/anat/{sub-pavia01_space-other_T1w_softseg_bin.json => sub-pavia01_space-other_T1w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-pavia01/anat/{sub-pavia01_space-other_T1w_softseg_bin.nii.gz => sub-pavia01_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-pavia01/anat/{sub-pavia01_space-other_T2star_softseg_bin.json => sub-pavia01_space-other_T2star_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-pavia01/anat/{sub-pavia01_space-other_T2star_softseg_bin.nii.gz => sub-pavia01_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-pavia01/anat/{sub-pavia01_space-other_T2w_softseg_bin.json => sub-pavia01_space-other_T2w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-pavia01/anat/{sub-pavia01_space-other_T2w_softseg_bin.nii.gz => sub-pavia01_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-pavia01/dwi/{sub-pavia01_rec-average_dwi_softseg_bin.json => sub-pavia01_rec-average_dwi_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-pavia01/dwi/{sub-pavia01_rec-average_dwi_softseg_bin.nii.gz => sub-pavia01_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-pavia02/anat/{sub-pavia02_flip-1_mt-on_space-other_MTS_softseg_bin.json => sub-pavia02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-pavia02/anat/{sub-pavia02_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz => sub-pavia02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-pavia02/anat/{sub-pavia02_flip-2_mt-off_space-other_MTS_softseg_bin.json => sub-pavia02_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-pavia02/anat/{sub-pavia02_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz => sub-pavia02_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-pavia02/anat/{sub-pavia02_space-other_T1w_softseg_bin.json => sub-pavia02_space-other_T1w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-pavia02/anat/{sub-pavia02_space-other_T1w_softseg_bin.nii.gz => sub-pavia02_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-pavia02/anat/{sub-pavia02_space-other_T2star_softseg_bin.json => sub-pavia02_space-other_T2star_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-pavia02/anat/{sub-pavia02_space-other_T2star_softseg_bin.nii.gz => sub-pavia02_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-pavia02/anat/{sub-pavia02_space-other_T2w_softseg_bin.json => sub-pavia02_space-other_T2w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-pavia02/anat/{sub-pavia02_space-other_T2w_softseg_bin.nii.gz => sub-pavia02_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-pavia02/dwi/{sub-pavia02_rec-average_dwi_softseg_bin.json => sub-pavia02_rec-average_dwi_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-pavia02/dwi/{sub-pavia02_rec-average_dwi_softseg_bin.nii.gz => sub-pavia02_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-pavia03/anat/{sub-pavia03_flip-1_mt-on_space-other_MTS_softseg_bin.json => sub-pavia03_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-pavia03/anat/{sub-pavia03_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz => sub-pavia03_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-pavia03/anat/{sub-pavia03_flip-2_mt-off_space-other_MTS_softseg_bin.json => sub-pavia03_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-pavia03/anat/{sub-pavia03_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz => sub-pavia03_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-pavia03/anat/{sub-pavia03_space-other_T1w_softseg_bin.json => sub-pavia03_space-other_T1w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-pavia03/anat/{sub-pavia03_space-other_T1w_softseg_bin.nii.gz => sub-pavia03_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-pavia03/anat/{sub-pavia03_space-other_T2star_softseg_bin.json => sub-pavia03_space-other_T2star_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-pavia03/anat/{sub-pavia03_space-other_T2star_softseg_bin.nii.gz => sub-pavia03_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-pavia03/anat/{sub-pavia03_space-other_T2w_softseg_bin.json => sub-pavia03_space-other_T2w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-pavia03/anat/{sub-pavia03_space-other_T2w_softseg_bin.nii.gz => sub-pavia03_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-pavia03/dwi/{sub-pavia03_rec-average_dwi_softseg_bin.json => sub-pavia03_rec-average_dwi_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-pavia03/dwi/{sub-pavia03_rec-average_dwi_softseg_bin.nii.gz => sub-pavia03_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-pavia04/anat/{sub-pavia04_flip-1_mt-on_space-other_MTS_softseg_bin.json => sub-pavia04_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-pavia04/anat/{sub-pavia04_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz => sub-pavia04_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-pavia04/anat/{sub-pavia04_flip-2_mt-off_space-other_MTS_softseg_bin.json => sub-pavia04_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-pavia04/anat/{sub-pavia04_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz => sub-pavia04_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-pavia04/anat/{sub-pavia04_space-other_T1w_softseg_bin.json => sub-pavia04_space-other_T1w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-pavia04/anat/{sub-pavia04_space-other_T1w_softseg_bin.nii.gz => sub-pavia04_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-pavia04/anat/{sub-pavia04_space-other_T2star_softseg_bin.json => sub-pavia04_space-other_T2star_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-pavia04/anat/{sub-pavia04_space-other_T2star_softseg_bin.nii.gz => sub-pavia04_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-pavia04/anat/{sub-pavia04_space-other_T2w_softseg_bin.json => sub-pavia04_space-other_T2w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-pavia04/anat/{sub-pavia04_space-other_T2w_softseg_bin.nii.gz => sub-pavia04_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-pavia04/dwi/{sub-pavia04_rec-average_dwi_softseg_bin.json => sub-pavia04_rec-average_dwi_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-pavia04/dwi/{sub-pavia04_rec-average_dwi_softseg_bin.nii.gz => sub-pavia04_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-pavia05/anat/{sub-pavia05_flip-1_mt-on_space-other_MTS_softseg_bin.json => sub-pavia05_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-pavia05/anat/{sub-pavia05_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz => sub-pavia05_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-pavia05/anat/{sub-pavia05_flip-2_mt-off_space-other_MTS_softseg_bin.json => sub-pavia05_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-pavia05/anat/{sub-pavia05_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz => sub-pavia05_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-pavia05/anat/{sub-pavia05_space-other_T1w_softseg_bin.json => sub-pavia05_space-other_T1w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-pavia05/anat/{sub-pavia05_space-other_T1w_softseg_bin.nii.gz => sub-pavia05_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-pavia05/anat/{sub-pavia05_space-other_T2star_softseg_bin.json => sub-pavia05_space-other_T2star_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-pavia05/anat/{sub-pavia05_space-other_T2star_softseg_bin.nii.gz => sub-pavia05_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-pavia05/anat/{sub-pavia05_space-other_T2w_softseg_bin.json => sub-pavia05_space-other_T2w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-pavia05/anat/{sub-pavia05_space-other_T2w_softseg_bin.nii.gz => sub-pavia05_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-pavia05/dwi/{sub-pavia05_rec-average_dwi_softseg_bin.json => sub-pavia05_rec-average_dwi_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-pavia05/dwi/{sub-pavia05_rec-average_dwi_softseg_bin.nii.gz => sub-pavia05_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-pavia06/anat/{sub-pavia06_flip-1_mt-on_space-other_MTS_softseg_bin.json => sub-pavia06_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-pavia06/anat/{sub-pavia06_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz => sub-pavia06_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-pavia06/anat/{sub-pavia06_flip-2_mt-off_space-other_MTS_softseg_bin.json => sub-pavia06_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-pavia06/anat/{sub-pavia06_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz => sub-pavia06_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-pavia06/anat/{sub-pavia06_space-other_T1w_softseg_bin.json => sub-pavia06_space-other_T1w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-pavia06/anat/{sub-pavia06_space-other_T1w_softseg_bin.nii.gz => sub-pavia06_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-pavia06/anat/{sub-pavia06_space-other_T2star_softseg_bin.json => sub-pavia06_space-other_T2star_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-pavia06/anat/{sub-pavia06_space-other_T2star_softseg_bin.nii.gz => sub-pavia06_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-pavia06/anat/{sub-pavia06_space-other_T2w_softseg_bin.json => sub-pavia06_space-other_T2w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-pavia06/anat/{sub-pavia06_space-other_T2w_softseg_bin.nii.gz => sub-pavia06_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-pavia06/dwi/{sub-pavia06_rec-average_dwi_softseg_bin.json => sub-pavia06_rec-average_dwi_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-pavia06/dwi/{sub-pavia06_rec-average_dwi_softseg_bin.nii.gz => sub-pavia06_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-perform01/anat/{sub-perform01_flip-1_mt-on_space-other_MTS_softseg_bin.json => sub-perform01_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-perform01/anat/{sub-perform01_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz => sub-perform01_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-perform01/anat/{sub-perform01_flip-2_mt-off_space-other_MTS_softseg_bin.json => sub-perform01_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-perform01/anat/{sub-perform01_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz => sub-perform01_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-perform01/anat/{sub-perform01_space-other_T1w_softseg_bin.json => sub-perform01_space-other_T1w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-perform01/anat/{sub-perform01_space-other_T1w_softseg_bin.nii.gz => sub-perform01_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-perform01/anat/{sub-perform01_space-other_T2star_softseg_bin.json => sub-perform01_space-other_T2star_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-perform01/anat/{sub-perform01_space-other_T2star_softseg_bin.nii.gz => sub-perform01_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-perform01/anat/{sub-perform01_space-other_T2w_softseg_bin.json => sub-perform01_space-other_T2w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-perform01/anat/{sub-perform01_space-other_T2w_softseg_bin.nii.gz => sub-perform01_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-perform01/dwi/{sub-perform01_rec-average_dwi_softseg_bin.json => sub-perform01_rec-average_dwi_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-perform01/dwi/{sub-perform01_rec-average_dwi_softseg_bin.nii.gz => sub-perform01_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-perform02/anat/{sub-perform02_flip-1_mt-on_space-other_MTS_softseg_bin.json => sub-perform02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-perform02/anat/{sub-perform02_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz => sub-perform02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-perform02/anat/{sub-perform02_flip-2_mt-off_space-other_MTS_softseg_bin.json => sub-perform02_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-perform02/anat/{sub-perform02_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz => sub-perform02_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-perform02/anat/{sub-perform02_space-other_T1w_softseg_bin.json => sub-perform02_space-other_T1w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-perform02/anat/{sub-perform02_space-other_T1w_softseg_bin.nii.gz => sub-perform02_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-perform02/anat/{sub-perform02_space-other_T2star_softseg_bin.json => sub-perform02_space-other_T2star_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-perform02/anat/{sub-perform02_space-other_T2star_softseg_bin.nii.gz => sub-perform02_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-perform02/anat/{sub-perform02_space-other_T2w_softseg_bin.json => sub-perform02_space-other_T2w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-perform02/anat/{sub-perform02_space-other_T2w_softseg_bin.nii.gz => sub-perform02_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-perform02/dwi/{sub-perform02_rec-average_dwi_softseg_bin.json => sub-perform02_rec-average_dwi_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-perform02/dwi/{sub-perform02_rec-average_dwi_softseg_bin.nii.gz => sub-perform02_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-perform03/anat/{sub-perform03_flip-1_mt-on_space-other_MTS_softseg_bin.json => sub-perform03_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-perform03/anat/{sub-perform03_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz => sub-perform03_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-perform03/anat/{sub-perform03_flip-2_mt-off_space-other_MTS_softseg_bin.json => sub-perform03_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-perform03/anat/{sub-perform03_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz => sub-perform03_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-perform03/anat/{sub-perform03_space-other_T1w_softseg_bin.json => sub-perform03_space-other_T1w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-perform03/anat/{sub-perform03_space-other_T1w_softseg_bin.nii.gz => sub-perform03_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-perform03/anat/{sub-perform03_space-other_T2star_softseg_bin.json => sub-perform03_space-other_T2star_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-perform03/anat/{sub-perform03_space-other_T2star_softseg_bin.nii.gz => sub-perform03_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-perform03/anat/{sub-perform03_space-other_T2w_softseg_bin.json => sub-perform03_space-other_T2w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-perform03/anat/{sub-perform03_space-other_T2w_softseg_bin.nii.gz => sub-perform03_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-perform03/dwi/{sub-perform03_rec-average_dwi_softseg_bin.json => sub-perform03_rec-average_dwi_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-perform03/dwi/{sub-perform03_rec-average_dwi_softseg_bin.nii.gz => sub-perform03_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-perform04/anat/{sub-perform04_flip-1_mt-on_space-other_MTS_softseg_bin.json => sub-perform04_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-perform04/anat/{sub-perform04_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz => sub-perform04_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-perform04/anat/{sub-perform04_flip-2_mt-off_space-other_MTS_softseg_bin.json => sub-perform04_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-perform04/anat/{sub-perform04_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz => sub-perform04_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-perform04/anat/{sub-perform04_space-other_T1w_softseg_bin.json => sub-perform04_space-other_T1w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-perform04/anat/{sub-perform04_space-other_T1w_softseg_bin.nii.gz => sub-perform04_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-perform04/anat/{sub-perform04_space-other_T2star_softseg_bin.json => sub-perform04_space-other_T2star_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-perform04/anat/{sub-perform04_space-other_T2star_softseg_bin.nii.gz => sub-perform04_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-perform04/anat/{sub-perform04_space-other_T2w_softseg_bin.json => sub-perform04_space-other_T2w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-perform04/anat/{sub-perform04_space-other_T2w_softseg_bin.nii.gz => sub-perform04_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-perform04/dwi/{sub-perform04_rec-average_dwi_softseg_bin.json => sub-perform04_rec-average_dwi_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-perform04/dwi/{sub-perform04_rec-average_dwi_softseg_bin.nii.gz => sub-perform04_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-perform05/anat/{sub-perform05_flip-1_mt-on_space-other_MTS_softseg_bin.json => sub-perform05_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-perform05/anat/{sub-perform05_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz => sub-perform05_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-perform05/anat/{sub-perform05_flip-2_mt-off_space-other_MTS_softseg_bin.json => sub-perform05_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-perform05/anat/{sub-perform05_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz => sub-perform05_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-perform05/anat/{sub-perform05_space-other_T1w_softseg_bin.json => sub-perform05_space-other_T1w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-perform05/anat/{sub-perform05_space-other_T1w_softseg_bin.nii.gz => sub-perform05_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-perform05/anat/{sub-perform05_space-other_T2star_softseg_bin.json => sub-perform05_space-other_T2star_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-perform05/anat/{sub-perform05_space-other_T2star_softseg_bin.nii.gz => sub-perform05_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-perform05/anat/{sub-perform05_space-other_T2w_softseg_bin.json => sub-perform05_space-other_T2w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-perform05/anat/{sub-perform05_space-other_T2w_softseg_bin.nii.gz => sub-perform05_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-perform05/dwi/{sub-perform05_rec-average_dwi_softseg_bin.json => sub-perform05_rec-average_dwi_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-perform05/dwi/{sub-perform05_rec-average_dwi_softseg_bin.nii.gz => sub-perform05_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-perform06/anat/{sub-perform06_flip-1_mt-on_space-other_MTS_softseg_bin.json => sub-perform06_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-perform06/anat/{sub-perform06_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz => sub-perform06_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-perform06/anat/{sub-perform06_flip-2_mt-off_space-other_MTS_softseg_bin.json => sub-perform06_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-perform06/anat/{sub-perform06_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz => sub-perform06_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-perform06/anat/{sub-perform06_space-other_T1w_softseg_bin.json => sub-perform06_space-other_T1w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-perform06/anat/{sub-perform06_space-other_T1w_softseg_bin.nii.gz => sub-perform06_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-perform06/anat/{sub-perform06_space-other_T2star_softseg_bin.json => sub-perform06_space-other_T2star_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-perform06/anat/{sub-perform06_space-other_T2star_softseg_bin.nii.gz => sub-perform06_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-perform06/anat/{sub-perform06_space-other_T2w_softseg_bin.json => sub-perform06_space-other_T2w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-perform06/anat/{sub-perform06_space-other_T2w_softseg_bin.nii.gz => sub-perform06_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-perform06/dwi/{sub-perform06_rec-average_dwi_softseg_bin.json => sub-perform06_rec-average_dwi_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-perform06/dwi/{sub-perform06_rec-average_dwi_softseg_bin.nii.gz => sub-perform06_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-queensland01/anat/{sub-queensland01_flip-1_mt-on_space-other_MTS_softseg_bin.json => sub-queensland01_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-queensland01/anat/{sub-queensland01_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz => sub-queensland01_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-queensland01/anat/{sub-queensland01_flip-2_mt-off_space-other_MTS_softseg_bin.json => sub-queensland01_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-queensland01/anat/{sub-queensland01_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz => sub-queensland01_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-queensland01/anat/{sub-queensland01_space-other_T1w_softseg_bin.json => sub-queensland01_space-other_T1w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-queensland01/anat/{sub-queensland01_space-other_T1w_softseg_bin.nii.gz => sub-queensland01_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-queensland01/anat/{sub-queensland01_space-other_T2star_softseg_bin.json => sub-queensland01_space-other_T2star_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-queensland01/anat/{sub-queensland01_space-other_T2star_softseg_bin.nii.gz => sub-queensland01_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-queensland01/anat/{sub-queensland01_space-other_T2w_softseg_bin.json => sub-queensland01_space-other_T2w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-queensland01/anat/{sub-queensland01_space-other_T2w_softseg_bin.nii.gz => sub-queensland01_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-queensland01/dwi/{sub-queensland01_rec-average_dwi_softseg_bin.json => sub-queensland01_rec-average_dwi_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-queensland01/dwi/{sub-queensland01_rec-average_dwi_softseg_bin.nii.gz => sub-queensland01_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-queensland02/anat/{sub-queensland02_flip-1_mt-on_space-other_MTS_softseg_bin.json => sub-queensland02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-queensland02/anat/{sub-queensland02_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz => sub-queensland02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-queensland02/anat/{sub-queensland02_flip-2_mt-off_space-other_MTS_softseg_bin.json => sub-queensland02_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-queensland02/anat/{sub-queensland02_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz => sub-queensland02_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-queensland02/anat/{sub-queensland02_space-other_T1w_softseg_bin.json => sub-queensland02_space-other_T1w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-queensland02/anat/{sub-queensland02_space-other_T1w_softseg_bin.nii.gz => sub-queensland02_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-queensland02/anat/{sub-queensland02_space-other_T2star_softseg_bin.json => sub-queensland02_space-other_T2star_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-queensland02/anat/{sub-queensland02_space-other_T2star_softseg_bin.nii.gz => sub-queensland02_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-queensland02/anat/{sub-queensland02_space-other_T2w_softseg_bin.json => sub-queensland02_space-other_T2w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-queensland02/anat/{sub-queensland02_space-other_T2w_softseg_bin.nii.gz => sub-queensland02_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-queensland02/dwi/{sub-queensland02_rec-average_dwi_softseg_bin.json => sub-queensland02_rec-average_dwi_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-queensland02/dwi/{sub-queensland02_rec-average_dwi_softseg_bin.nii.gz => sub-queensland02_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-queensland03/anat/{sub-queensland03_flip-1_mt-on_space-other_MTS_softseg_bin.json => sub-queensland03_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-queensland03/anat/{sub-queensland03_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz => sub-queensland03_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-queensland03/anat/{sub-queensland03_flip-2_mt-off_space-other_MTS_softseg_bin.json => sub-queensland03_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-queensland03/anat/{sub-queensland03_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz => sub-queensland03_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-queensland03/anat/{sub-queensland03_space-other_T1w_softseg_bin.json => sub-queensland03_space-other_T1w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-queensland03/anat/{sub-queensland03_space-other_T1w_softseg_bin.nii.gz => sub-queensland03_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-queensland03/anat/{sub-queensland03_space-other_T2star_softseg_bin.json => sub-queensland03_space-other_T2star_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-queensland03/anat/{sub-queensland03_space-other_T2star_softseg_bin.nii.gz => sub-queensland03_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-queensland03/anat/{sub-queensland03_space-other_T2w_softseg_bin.json => sub-queensland03_space-other_T2w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-queensland03/anat/{sub-queensland03_space-other_T2w_softseg_bin.nii.gz => sub-queensland03_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-queensland03/dwi/{sub-queensland03_rec-average_dwi_softseg_bin.json => sub-queensland03_rec-average_dwi_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-queensland03/dwi/{sub-queensland03_rec-average_dwi_softseg_bin.nii.gz => sub-queensland03_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-queensland04/anat/{sub-queensland04_flip-1_mt-on_space-other_MTS_softseg_bin.json => sub-queensland04_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-queensland04/anat/{sub-queensland04_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz => sub-queensland04_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-queensland04/anat/{sub-queensland04_flip-2_mt-off_space-other_MTS_softseg_bin.json => sub-queensland04_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-queensland04/anat/{sub-queensland04_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz => sub-queensland04_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-queensland04/anat/{sub-queensland04_space-other_T1w_softseg_bin.json => sub-queensland04_space-other_T1w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-queensland04/anat/{sub-queensland04_space-other_T1w_softseg_bin.nii.gz => sub-queensland04_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-queensland04/anat/{sub-queensland04_space-other_T2star_softseg_bin.json => sub-queensland04_space-other_T2star_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-queensland04/anat/{sub-queensland04_space-other_T2star_softseg_bin.nii.gz => sub-queensland04_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-queensland04/anat/{sub-queensland04_space-other_T2w_softseg_bin.json => sub-queensland04_space-other_T2w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-queensland04/anat/{sub-queensland04_space-other_T2w_softseg_bin.nii.gz => sub-queensland04_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-queensland04/dwi/{sub-queensland04_rec-average_dwi_softseg_bin.json => sub-queensland04_rec-average_dwi_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-queensland04/dwi/{sub-queensland04_rec-average_dwi_softseg_bin.nii.gz => sub-queensland04_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-queensland05/anat/{sub-queensland05_flip-1_mt-on_space-other_MTS_softseg_bin.json => sub-queensland05_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-queensland05/anat/{sub-queensland05_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz => sub-queensland05_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-queensland05/anat/{sub-queensland05_flip-2_mt-off_space-other_MTS_softseg_bin.json => sub-queensland05_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-queensland05/anat/{sub-queensland05_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz => sub-queensland05_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-queensland05/anat/{sub-queensland05_space-other_T1w_softseg_bin.json => sub-queensland05_space-other_T1w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-queensland05/anat/{sub-queensland05_space-other_T1w_softseg_bin.nii.gz => sub-queensland05_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-queensland05/anat/{sub-queensland05_space-other_T2star_softseg_bin.json => sub-queensland05_space-other_T2star_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-queensland05/anat/{sub-queensland05_space-other_T2star_softseg_bin.nii.gz => sub-queensland05_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-queensland05/anat/{sub-queensland05_space-other_T2w_softseg_bin.json => sub-queensland05_space-other_T2w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-queensland05/anat/{sub-queensland05_space-other_T2w_softseg_bin.nii.gz => sub-queensland05_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-queensland05/dwi/{sub-queensland05_rec-average_dwi_softseg_bin.json => sub-queensland05_rec-average_dwi_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-queensland05/dwi/{sub-queensland05_rec-average_dwi_softseg_bin.nii.gz => sub-queensland05_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-queensland06/anat/{sub-queensland06_flip-1_mt-on_space-other_MTS_softseg_bin.json => sub-queensland06_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-queensland06/anat/{sub-queensland06_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz => sub-queensland06_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-queensland06/anat/{sub-queensland06_flip-2_mt-off_space-other_MTS_softseg_bin.json => sub-queensland06_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-queensland06/anat/{sub-queensland06_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz => sub-queensland06_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-queensland06/anat/{sub-queensland06_space-other_T1w_softseg_bin.json => sub-queensland06_space-other_T1w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-queensland06/anat/{sub-queensland06_space-other_T1w_softseg_bin.nii.gz => sub-queensland06_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-queensland06/anat/{sub-queensland06_space-other_T2star_softseg_bin.json => sub-queensland06_space-other_T2star_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-queensland06/anat/{sub-queensland06_space-other_T2star_softseg_bin.nii.gz => sub-queensland06_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-queensland06/anat/{sub-queensland06_space-other_T2w_softseg_bin.json => sub-queensland06_space-other_T2w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-queensland06/anat/{sub-queensland06_space-other_T2w_softseg_bin.nii.gz => sub-queensland06_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-queensland06/dwi/{sub-queensland06_rec-average_dwi_softseg_bin.json => sub-queensland06_rec-average_dwi_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-queensland06/dwi/{sub-queensland06_rec-average_dwi_softseg_bin.nii.gz => sub-queensland06_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-sherbrooke01/anat/{sub-sherbrooke01_flip-1_mt-on_space-other_MTS_softseg_bin.json => sub-sherbrooke01_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-sherbrooke01/anat/{sub-sherbrooke01_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz => sub-sherbrooke01_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-sherbrooke01/anat/{sub-sherbrooke01_flip-2_mt-off_space-other_MTS_softseg_bin.json => sub-sherbrooke01_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-sherbrooke01/anat/{sub-sherbrooke01_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz => sub-sherbrooke01_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-sherbrooke01/anat/{sub-sherbrooke01_space-other_T1w_softseg_bin.json => sub-sherbrooke01_space-other_T1w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-sherbrooke01/anat/{sub-sherbrooke01_space-other_T1w_softseg_bin.nii.gz => sub-sherbrooke01_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-sherbrooke01/anat/{sub-sherbrooke01_space-other_T2star_softseg_bin.json => sub-sherbrooke01_space-other_T2star_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-sherbrooke01/anat/{sub-sherbrooke01_space-other_T2star_softseg_bin.nii.gz => sub-sherbrooke01_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-sherbrooke01/anat/{sub-sherbrooke01_space-other_T2w_softseg_bin.json => sub-sherbrooke01_space-other_T2w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-sherbrooke01/anat/{sub-sherbrooke01_space-other_T2w_softseg_bin.nii.gz => sub-sherbrooke01_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-sherbrooke01/dwi/{sub-sherbrooke01_rec-average_dwi_softseg_bin.json => sub-sherbrooke01_rec-average_dwi_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-sherbrooke01/dwi/{sub-sherbrooke01_rec-average_dwi_softseg_bin.nii.gz => sub-sherbrooke01_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-sherbrooke02/anat/{sub-sherbrooke02_flip-1_mt-on_space-other_MTS_softseg_bin.json => sub-sherbrooke02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-sherbrooke02/anat/{sub-sherbrooke02_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz => sub-sherbrooke02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-sherbrooke02/anat/{sub-sherbrooke02_flip-2_mt-off_space-other_MTS_softseg_bin.json => sub-sherbrooke02_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-sherbrooke02/anat/{sub-sherbrooke02_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz => sub-sherbrooke02_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-sherbrooke02/anat/{sub-sherbrooke02_space-other_T1w_softseg_bin.json => sub-sherbrooke02_space-other_T1w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-sherbrooke02/anat/{sub-sherbrooke02_space-other_T1w_softseg_bin.nii.gz => sub-sherbrooke02_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-sherbrooke02/anat/{sub-sherbrooke02_space-other_T2star_softseg_bin.json => sub-sherbrooke02_space-other_T2star_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-sherbrooke02/anat/{sub-sherbrooke02_space-other_T2star_softseg_bin.nii.gz => sub-sherbrooke02_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-sherbrooke02/anat/{sub-sherbrooke02_space-other_T2w_softseg_bin.json => sub-sherbrooke02_space-other_T2w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-sherbrooke02/anat/{sub-sherbrooke02_space-other_T2w_softseg_bin.nii.gz => sub-sherbrooke02_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-sherbrooke02/dwi/{sub-sherbrooke02_rec-average_dwi_softseg_bin.json => sub-sherbrooke02_rec-average_dwi_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-sherbrooke02/dwi/{sub-sherbrooke02_rec-average_dwi_softseg_bin.nii.gz => sub-sherbrooke02_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-sherbrooke03/anat/{sub-sherbrooke03_flip-1_mt-on_space-other_MTS_softseg_bin.json => sub-sherbrooke03_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-sherbrooke03/anat/{sub-sherbrooke03_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz => sub-sherbrooke03_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-sherbrooke03/anat/{sub-sherbrooke03_flip-2_mt-off_space-other_MTS_softseg_bin.json => sub-sherbrooke03_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-sherbrooke03/anat/{sub-sherbrooke03_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz => sub-sherbrooke03_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-sherbrooke03/anat/{sub-sherbrooke03_space-other_T1w_softseg_bin.json => sub-sherbrooke03_space-other_T1w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-sherbrooke03/anat/{sub-sherbrooke03_space-other_T1w_softseg_bin.nii.gz => sub-sherbrooke03_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-sherbrooke03/anat/{sub-sherbrooke03_space-other_T2star_softseg_bin.json => sub-sherbrooke03_space-other_T2star_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-sherbrooke03/anat/{sub-sherbrooke03_space-other_T2star_softseg_bin.nii.gz => sub-sherbrooke03_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-sherbrooke03/anat/{sub-sherbrooke03_space-other_T2w_softseg_bin.json => sub-sherbrooke03_space-other_T2w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-sherbrooke03/anat/{sub-sherbrooke03_space-other_T2w_softseg_bin.nii.gz => sub-sherbrooke03_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-sherbrooke03/dwi/{sub-sherbrooke03_rec-average_dwi_softseg_bin.json => sub-sherbrooke03_rec-average_dwi_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-sherbrooke03/dwi/{sub-sherbrooke03_rec-average_dwi_softseg_bin.nii.gz => sub-sherbrooke03_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-sherbrooke04/anat/{sub-sherbrooke04_flip-1_mt-on_space-other_MTS_softseg_bin.json => sub-sherbrooke04_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-sherbrooke04/anat/{sub-sherbrooke04_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz => sub-sherbrooke04_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-sherbrooke04/anat/{sub-sherbrooke04_flip-2_mt-off_space-other_MTS_softseg_bin.json => sub-sherbrooke04_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-sherbrooke04/anat/{sub-sherbrooke04_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz => sub-sherbrooke04_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-sherbrooke04/anat/{sub-sherbrooke04_space-other_T1w_softseg_bin.json => sub-sherbrooke04_space-other_T1w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-sherbrooke04/anat/{sub-sherbrooke04_space-other_T1w_softseg_bin.nii.gz => sub-sherbrooke04_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-sherbrooke04/anat/{sub-sherbrooke04_space-other_T2star_softseg_bin.json => sub-sherbrooke04_space-other_T2star_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-sherbrooke04/anat/{sub-sherbrooke04_space-other_T2star_softseg_bin.nii.gz => sub-sherbrooke04_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-sherbrooke04/anat/{sub-sherbrooke04_space-other_T2w_softseg_bin.json => sub-sherbrooke04_space-other_T2w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-sherbrooke04/anat/{sub-sherbrooke04_space-other_T2w_softseg_bin.nii.gz => sub-sherbrooke04_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-sherbrooke04/dwi/{sub-sherbrooke04_rec-average_dwi_softseg_bin.json => sub-sherbrooke04_rec-average_dwi_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-sherbrooke04/dwi/{sub-sherbrooke04_rec-average_dwi_softseg_bin.nii.gz => sub-sherbrooke04_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-sherbrooke05/anat/{sub-sherbrooke05_flip-1_mt-on_space-other_MTS_softseg_bin.json => sub-sherbrooke05_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-sherbrooke05/anat/{sub-sherbrooke05_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz => sub-sherbrooke05_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-sherbrooke05/anat/{sub-sherbrooke05_flip-2_mt-off_space-other_MTS_softseg_bin.json => sub-sherbrooke05_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-sherbrooke05/anat/{sub-sherbrooke05_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz => sub-sherbrooke05_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-sherbrooke05/anat/{sub-sherbrooke05_space-other_T1w_softseg_bin.json => sub-sherbrooke05_space-other_T1w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-sherbrooke05/anat/{sub-sherbrooke05_space-other_T1w_softseg_bin.nii.gz => sub-sherbrooke05_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-sherbrooke05/anat/{sub-sherbrooke05_space-other_T2star_softseg_bin.json => sub-sherbrooke05_space-other_T2star_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-sherbrooke05/anat/{sub-sherbrooke05_space-other_T2star_softseg_bin.nii.gz => sub-sherbrooke05_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-sherbrooke05/anat/{sub-sherbrooke05_space-other_T2w_softseg_bin.json => sub-sherbrooke05_space-other_T2w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-sherbrooke05/anat/{sub-sherbrooke05_space-other_T2w_softseg_bin.nii.gz => sub-sherbrooke05_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-sherbrooke05/dwi/{sub-sherbrooke05_rec-average_dwi_softseg_bin.json => sub-sherbrooke05_rec-average_dwi_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-sherbrooke05/dwi/{sub-sherbrooke05_rec-average_dwi_softseg_bin.nii.gz => sub-sherbrooke05_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-sherbrooke06/anat/{sub-sherbrooke06_flip-1_mt-on_space-other_MTS_softseg_bin.json => sub-sherbrooke06_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-sherbrooke06/anat/{sub-sherbrooke06_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz => sub-sherbrooke06_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-sherbrooke06/anat/{sub-sherbrooke06_flip-2_mt-off_space-other_MTS_softseg_bin.json => sub-sherbrooke06_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-sherbrooke06/anat/{sub-sherbrooke06_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz => sub-sherbrooke06_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-sherbrooke06/anat/{sub-sherbrooke06_space-other_T1w_softseg_bin.json => sub-sherbrooke06_space-other_T1w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-sherbrooke06/anat/{sub-sherbrooke06_space-other_T1w_softseg_bin.nii.gz => sub-sherbrooke06_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-sherbrooke06/anat/{sub-sherbrooke06_space-other_T2star_softseg_bin.json => sub-sherbrooke06_space-other_T2star_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-sherbrooke06/anat/{sub-sherbrooke06_space-other_T2star_softseg_bin.nii.gz => sub-sherbrooke06_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-sherbrooke06/anat/{sub-sherbrooke06_space-other_T2w_softseg_bin.json => sub-sherbrooke06_space-other_T2w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-sherbrooke06/anat/{sub-sherbrooke06_space-other_T2w_softseg_bin.nii.gz => sub-sherbrooke06_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-sherbrooke06/dwi/{sub-sherbrooke06_rec-average_dwi_softseg_bin.json => sub-sherbrooke06_rec-average_dwi_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-sherbrooke06/dwi/{sub-sherbrooke06_rec-average_dwi_softseg_bin.nii.gz => sub-sherbrooke06_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-sherbrooke07/anat/{sub-sherbrooke07_flip-1_mt-on_space-other_MTS_softseg_bin.json => sub-sherbrooke07_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-sherbrooke07/anat/{sub-sherbrooke07_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz => sub-sherbrooke07_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-sherbrooke07/anat/{sub-sherbrooke07_flip-2_mt-off_space-other_MTS_softseg_bin.json => sub-sherbrooke07_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-sherbrooke07/anat/{sub-sherbrooke07_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz => sub-sherbrooke07_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-sherbrooke07/anat/{sub-sherbrooke07_space-other_T1w_softseg_bin.json => sub-sherbrooke07_space-other_T1w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-sherbrooke07/anat/{sub-sherbrooke07_space-other_T1w_softseg_bin.nii.gz => sub-sherbrooke07_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-sherbrooke07/anat/{sub-sherbrooke07_space-other_T2star_softseg_bin.json => sub-sherbrooke07_space-other_T2star_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-sherbrooke07/anat/{sub-sherbrooke07_space-other_T2star_softseg_bin.nii.gz => sub-sherbrooke07_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-sherbrooke07/anat/{sub-sherbrooke07_space-other_T2w_softseg_bin.json => sub-sherbrooke07_space-other_T2w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-sherbrooke07/anat/{sub-sherbrooke07_space-other_T2w_softseg_bin.nii.gz => sub-sherbrooke07_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-sherbrooke07/dwi/{sub-sherbrooke07_rec-average_dwi_softseg_bin.json => sub-sherbrooke07_rec-average_dwi_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-sherbrooke07/dwi/{sub-sherbrooke07_rec-average_dwi_softseg_bin.nii.gz => sub-sherbrooke07_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-stanford01/anat/{sub-stanford01_flip-1_mt-on_space-other_MTS_softseg_bin.json => sub-stanford01_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-stanford01/anat/{sub-stanford01_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz => sub-stanford01_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-stanford01/anat/{sub-stanford01_flip-2_mt-off_space-other_MTS_softseg_bin.json => sub-stanford01_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-stanford01/anat/{sub-stanford01_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz => sub-stanford01_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-stanford01/anat/{sub-stanford01_space-other_T1w_softseg_bin.json => sub-stanford01_space-other_T1w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-stanford01/anat/{sub-stanford01_space-other_T1w_softseg_bin.nii.gz => sub-stanford01_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-stanford01/anat/{sub-stanford01_space-other_T2star_softseg_bin.json => sub-stanford01_space-other_T2star_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-stanford01/anat/{sub-stanford01_space-other_T2star_softseg_bin.nii.gz => sub-stanford01_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-stanford01/anat/{sub-stanford01_space-other_T2w_softseg_bin.json => sub-stanford01_space-other_T2w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-stanford01/anat/{sub-stanford01_space-other_T2w_softseg_bin.nii.gz => sub-stanford01_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-stanford01/dwi/{sub-stanford01_rec-average_dwi_softseg_bin.json => sub-stanford01_rec-average_dwi_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-stanford01/dwi/{sub-stanford01_rec-average_dwi_softseg_bin.nii.gz => sub-stanford01_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-stanford02/anat/{sub-stanford02_flip-1_mt-on_space-other_MTS_softseg_bin.json => sub-stanford02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-stanford02/anat/{sub-stanford02_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz => sub-stanford02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-stanford02/anat/{sub-stanford02_flip-2_mt-off_space-other_MTS_softseg_bin.json => sub-stanford02_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-stanford02/anat/{sub-stanford02_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz => sub-stanford02_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-stanford02/anat/{sub-stanford02_space-other_T1w_softseg_bin.json => sub-stanford02_space-other_T1w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-stanford02/anat/{sub-stanford02_space-other_T1w_softseg_bin.nii.gz => sub-stanford02_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-stanford02/anat/{sub-stanford02_space-other_T2star_softseg_bin.json => sub-stanford02_space-other_T2star_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-stanford02/anat/{sub-stanford02_space-other_T2star_softseg_bin.nii.gz => sub-stanford02_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-stanford02/anat/{sub-stanford02_space-other_T2w_softseg_bin.json => sub-stanford02_space-other_T2w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-stanford02/anat/{sub-stanford02_space-other_T2w_softseg_bin.nii.gz => sub-stanford02_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-stanford02/dwi/{sub-stanford02_rec-average_dwi_softseg_bin.json => sub-stanford02_rec-average_dwi_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-stanford02/dwi/{sub-stanford02_rec-average_dwi_softseg_bin.nii.gz => sub-stanford02_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-stanford03/anat/{sub-stanford03_flip-1_mt-on_space-other_MTS_softseg_bin.json => sub-stanford03_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-stanford03/anat/{sub-stanford03_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz => sub-stanford03_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-stanford03/anat/{sub-stanford03_flip-2_mt-off_space-other_MTS_softseg_bin.json => sub-stanford03_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-stanford03/anat/{sub-stanford03_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz => sub-stanford03_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-stanford03/anat/{sub-stanford03_space-other_T1w_softseg_bin.json => sub-stanford03_space-other_T1w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-stanford03/anat/{sub-stanford03_space-other_T1w_softseg_bin.nii.gz => sub-stanford03_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-stanford03/anat/{sub-stanford03_space-other_T2star_softseg_bin.json => sub-stanford03_space-other_T2star_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-stanford03/anat/{sub-stanford03_space-other_T2star_softseg_bin.nii.gz => sub-stanford03_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-stanford03/anat/{sub-stanford03_space-other_T2w_softseg_bin.json => sub-stanford03_space-other_T2w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-stanford03/anat/{sub-stanford03_space-other_T2w_softseg_bin.nii.gz => sub-stanford03_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-stanford03/dwi/{sub-stanford03_rec-average_dwi_softseg_bin.json => sub-stanford03_rec-average_dwi_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-stanford03/dwi/{sub-stanford03_rec-average_dwi_softseg_bin.nii.gz => sub-stanford03_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-stanford04/anat/{sub-stanford04_flip-1_mt-on_space-other_MTS_softseg_bin.json => sub-stanford04_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-stanford04/anat/{sub-stanford04_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz => sub-stanford04_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-stanford04/anat/{sub-stanford04_flip-2_mt-off_space-other_MTS_softseg_bin.json => sub-stanford04_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-stanford04/anat/{sub-stanford04_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz => sub-stanford04_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-stanford04/anat/{sub-stanford04_space-other_T1w_softseg_bin.json => sub-stanford04_space-other_T1w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-stanford04/anat/{sub-stanford04_space-other_T1w_softseg_bin.nii.gz => sub-stanford04_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-stanford04/anat/{sub-stanford04_space-other_T2star_softseg_bin.json => sub-stanford04_space-other_T2star_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-stanford04/anat/{sub-stanford04_space-other_T2star_softseg_bin.nii.gz => sub-stanford04_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-stanford04/anat/{sub-stanford04_space-other_T2w_softseg_bin.json => sub-stanford04_space-other_T2w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-stanford04/anat/{sub-stanford04_space-other_T2w_softseg_bin.nii.gz => sub-stanford04_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-stanford04/dwi/{sub-stanford04_rec-average_dwi_softseg_bin.json => sub-stanford04_rec-average_dwi_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-stanford04/dwi/{sub-stanford04_rec-average_dwi_softseg_bin.nii.gz => sub-stanford04_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-stanford05/anat/{sub-stanford05_flip-1_mt-on_space-other_MTS_softseg_bin.json => sub-stanford05_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-stanford05/anat/{sub-stanford05_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz => sub-stanford05_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-stanford05/anat/{sub-stanford05_flip-2_mt-off_space-other_MTS_softseg_bin.json => sub-stanford05_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-stanford05/anat/{sub-stanford05_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz => sub-stanford05_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-stanford05/anat/{sub-stanford05_space-other_T1w_softseg_bin.json => sub-stanford05_space-other_T1w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-stanford05/anat/{sub-stanford05_space-other_T1w_softseg_bin.nii.gz => sub-stanford05_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-stanford05/anat/{sub-stanford05_space-other_T2star_softseg_bin.json => sub-stanford05_space-other_T2star_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-stanford05/anat/{sub-stanford05_space-other_T2star_softseg_bin.nii.gz => sub-stanford05_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-stanford05/anat/{sub-stanford05_space-other_T2w_softseg_bin.json => sub-stanford05_space-other_T2w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-stanford05/anat/{sub-stanford05_space-other_T2w_softseg_bin.nii.gz => sub-stanford05_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-stanford05/dwi/{sub-stanford05_rec-average_dwi_softseg_bin.json => sub-stanford05_rec-average_dwi_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-stanford05/dwi/{sub-stanford05_rec-average_dwi_softseg_bin.nii.gz => sub-stanford05_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-stanford06/anat/{sub-stanford06_flip-1_mt-on_space-other_MTS_softseg_bin.json => sub-stanford06_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-stanford06/anat/{sub-stanford06_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz => sub-stanford06_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-stanford06/anat/{sub-stanford06_flip-2_mt-off_space-other_MTS_softseg_bin.json => sub-stanford06_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-stanford06/anat/{sub-stanford06_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz => sub-stanford06_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-stanford06/anat/{sub-stanford06_space-other_T1w_softseg_bin.json => sub-stanford06_space-other_T1w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-stanford06/anat/{sub-stanford06_space-other_T1w_softseg_bin.nii.gz => sub-stanford06_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-stanford06/anat/{sub-stanford06_space-other_T2star_softseg_bin.json => sub-stanford06_space-other_T2star_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-stanford06/anat/{sub-stanford06_space-other_T2star_softseg_bin.nii.gz => sub-stanford06_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-stanford06/anat/{sub-stanford06_space-other_T2w_softseg_bin.json => sub-stanford06_space-other_T2w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-stanford06/anat/{sub-stanford06_space-other_T2w_softseg_bin.nii.gz => sub-stanford06_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-stanford06/dwi/{sub-stanford06_rec-average_dwi_softseg_bin.json => sub-stanford06_rec-average_dwi_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-stanford06/dwi/{sub-stanford06_rec-average_dwi_softseg_bin.nii.gz => sub-stanford06_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-strasbourg01/anat/{sub-strasbourg01_flip-1_mt-on_space-other_MTS_softseg_bin.json => sub-strasbourg01_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-strasbourg01/anat/{sub-strasbourg01_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz => sub-strasbourg01_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-strasbourg01/anat/{sub-strasbourg01_flip-2_mt-off_space-other_MTS_softseg_bin.json => sub-strasbourg01_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-strasbourg01/anat/{sub-strasbourg01_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz => sub-strasbourg01_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-strasbourg01/anat/{sub-strasbourg01_space-other_T1w_softseg_bin.json => sub-strasbourg01_space-other_T1w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-strasbourg01/anat/{sub-strasbourg01_space-other_T1w_softseg_bin.nii.gz => sub-strasbourg01_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-strasbourg01/anat/{sub-strasbourg01_space-other_T2star_softseg_bin.json => sub-strasbourg01_space-other_T2star_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-strasbourg01/anat/{sub-strasbourg01_space-other_T2star_softseg_bin.nii.gz => sub-strasbourg01_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-strasbourg01/anat/{sub-strasbourg01_space-other_T2w_softseg_bin.json => sub-strasbourg01_space-other_T2w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-strasbourg01/anat/{sub-strasbourg01_space-other_T2w_softseg_bin.nii.gz => sub-strasbourg01_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-strasbourg01/dwi/{sub-strasbourg01_rec-average_dwi_softseg_bin.json => sub-strasbourg01_rec-average_dwi_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-strasbourg01/dwi/{sub-strasbourg01_rec-average_dwi_softseg_bin.nii.gz => sub-strasbourg01_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-strasbourg02/anat/{sub-strasbourg02_flip-1_mt-on_space-other_MTS_softseg_bin.json => sub-strasbourg02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-strasbourg02/anat/{sub-strasbourg02_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz => sub-strasbourg02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-strasbourg02/anat/{sub-strasbourg02_flip-2_mt-off_space-other_MTS_softseg_bin.json => sub-strasbourg02_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-strasbourg02/anat/{sub-strasbourg02_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz => sub-strasbourg02_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-strasbourg02/anat/{sub-strasbourg02_space-other_T1w_softseg_bin.json => sub-strasbourg02_space-other_T1w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-strasbourg02/anat/{sub-strasbourg02_space-other_T1w_softseg_bin.nii.gz => sub-strasbourg02_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-strasbourg02/anat/{sub-strasbourg02_space-other_T2star_softseg_bin.json => sub-strasbourg02_space-other_T2star_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-strasbourg02/anat/{sub-strasbourg02_space-other_T2star_softseg_bin.nii.gz => sub-strasbourg02_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-strasbourg02/anat/{sub-strasbourg02_space-other_T2w_softseg_bin.json => sub-strasbourg02_space-other_T2w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-strasbourg02/anat/{sub-strasbourg02_space-other_T2w_softseg_bin.nii.gz => sub-strasbourg02_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-strasbourg02/dwi/{sub-strasbourg02_rec-average_dwi_softseg_bin.json => sub-strasbourg02_rec-average_dwi_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-strasbourg02/dwi/{sub-strasbourg02_rec-average_dwi_softseg_bin.nii.gz => sub-strasbourg02_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-strasbourg03/anat/{sub-strasbourg03_flip-1_mt-on_space-other_MTS_softseg_bin.json => sub-strasbourg03_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-strasbourg03/anat/{sub-strasbourg03_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz => sub-strasbourg03_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-strasbourg03/anat/{sub-strasbourg03_flip-2_mt-off_space-other_MTS_softseg_bin.json => sub-strasbourg03_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-strasbourg03/anat/{sub-strasbourg03_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz => sub-strasbourg03_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-strasbourg03/anat/{sub-strasbourg03_space-other_T1w_softseg_bin.json => sub-strasbourg03_space-other_T1w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-strasbourg03/anat/{sub-strasbourg03_space-other_T1w_softseg_bin.nii.gz => sub-strasbourg03_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-strasbourg03/anat/{sub-strasbourg03_space-other_T2star_softseg_bin.json => sub-strasbourg03_space-other_T2star_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-strasbourg03/anat/{sub-strasbourg03_space-other_T2star_softseg_bin.nii.gz => sub-strasbourg03_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-strasbourg03/anat/{sub-strasbourg03_space-other_T2w_softseg_bin.json => sub-strasbourg03_space-other_T2w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-strasbourg03/anat/{sub-strasbourg03_space-other_T2w_softseg_bin.nii.gz => sub-strasbourg03_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-strasbourg03/dwi/{sub-strasbourg03_rec-average_dwi_softseg_bin.json => sub-strasbourg03_rec-average_dwi_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-strasbourg03/dwi/{sub-strasbourg03_rec-average_dwi_softseg_bin.nii.gz => sub-strasbourg03_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-strasbourg04/anat/{sub-strasbourg04_flip-1_mt-on_space-other_MTS_softseg_bin.json => sub-strasbourg04_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-strasbourg04/anat/{sub-strasbourg04_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz => sub-strasbourg04_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-strasbourg04/anat/{sub-strasbourg04_flip-2_mt-off_space-other_MTS_softseg_bin.json => sub-strasbourg04_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-strasbourg04/anat/{sub-strasbourg04_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz => sub-strasbourg04_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-strasbourg04/anat/{sub-strasbourg04_space-other_T1w_softseg_bin.json => sub-strasbourg04_space-other_T1w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-strasbourg04/anat/{sub-strasbourg04_space-other_T1w_softseg_bin.nii.gz => sub-strasbourg04_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-strasbourg04/anat/{sub-strasbourg04_space-other_T2star_softseg_bin.json => sub-strasbourg04_space-other_T2star_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-strasbourg04/anat/{sub-strasbourg04_space-other_T2star_softseg_bin.nii.gz => sub-strasbourg04_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-strasbourg04/anat/{sub-strasbourg04_space-other_T2w_softseg_bin.json => sub-strasbourg04_space-other_T2w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-strasbourg04/anat/{sub-strasbourg04_space-other_T2w_softseg_bin.nii.gz => sub-strasbourg04_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-strasbourg04/dwi/{sub-strasbourg04_rec-average_dwi_softseg_bin.json => sub-strasbourg04_rec-average_dwi_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-strasbourg04/dwi/{sub-strasbourg04_rec-average_dwi_softseg_bin.nii.gz => sub-strasbourg04_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-strasbourg05/anat/{sub-strasbourg05_flip-1_mt-on_space-other_MTS_softseg_bin.json => sub-strasbourg05_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-strasbourg05/anat/{sub-strasbourg05_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz => sub-strasbourg05_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-strasbourg05/anat/{sub-strasbourg05_flip-2_mt-off_space-other_MTS_softseg_bin.json => sub-strasbourg05_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-strasbourg05/anat/{sub-strasbourg05_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz => sub-strasbourg05_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-strasbourg05/anat/{sub-strasbourg05_space-other_T1w_softseg_bin.json => sub-strasbourg05_space-other_T1w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-strasbourg05/anat/{sub-strasbourg05_space-other_T1w_softseg_bin.nii.gz => sub-strasbourg05_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-strasbourg05/anat/{sub-strasbourg05_space-other_T2star_softseg_bin.json => sub-strasbourg05_space-other_T2star_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-strasbourg05/anat/{sub-strasbourg05_space-other_T2star_softseg_bin.nii.gz => sub-strasbourg05_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-strasbourg05/anat/{sub-strasbourg05_space-other_T2w_softseg_bin.json => sub-strasbourg05_space-other_T2w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-strasbourg05/anat/{sub-strasbourg05_space-other_T2w_softseg_bin.nii.gz => sub-strasbourg05_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-strasbourg05/dwi/{sub-strasbourg05_rec-average_dwi_softseg_bin.json => sub-strasbourg05_rec-average_dwi_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-strasbourg05/dwi/{sub-strasbourg05_rec-average_dwi_softseg_bin.nii.gz => sub-strasbourg05_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-strasbourg06/anat/{sub-strasbourg06_flip-1_mt-on_space-other_MTS_softseg_bin.json => sub-strasbourg06_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-strasbourg06/anat/{sub-strasbourg06_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz => sub-strasbourg06_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-strasbourg06/anat/{sub-strasbourg06_flip-2_mt-off_space-other_MTS_softseg_bin.json => sub-strasbourg06_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-strasbourg06/anat/{sub-strasbourg06_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz => sub-strasbourg06_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-strasbourg06/anat/{sub-strasbourg06_space-other_T1w_softseg_bin.json => sub-strasbourg06_space-other_T1w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-strasbourg06/anat/{sub-strasbourg06_space-other_T1w_softseg_bin.nii.gz => sub-strasbourg06_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-strasbourg06/anat/{sub-strasbourg06_space-other_T2star_softseg_bin.json => sub-strasbourg06_space-other_T2star_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-strasbourg06/anat/{sub-strasbourg06_space-other_T2star_softseg_bin.nii.gz => sub-strasbourg06_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-strasbourg06/anat/{sub-strasbourg06_space-other_T2w_softseg_bin.json => sub-strasbourg06_space-other_T2w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-strasbourg06/anat/{sub-strasbourg06_space-other_T2w_softseg_bin.nii.gz => sub-strasbourg06_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-strasbourg06/dwi/{sub-strasbourg06_rec-average_dwi_softseg_bin.json => sub-strasbourg06_rec-average_dwi_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-strasbourg06/dwi/{sub-strasbourg06_rec-average_dwi_softseg_bin.nii.gz => sub-strasbourg06_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-tehranS01/anat/{sub-tehranS01_flip-1_mt-on_space-other_MTS_softseg_bin.json => sub-tehranS01_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-tehranS01/anat/{sub-tehranS01_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz => sub-tehranS01_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-tehranS01/anat/{sub-tehranS01_flip-2_mt-off_space-other_MTS_softseg_bin.json => sub-tehranS01_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-tehranS01/anat/{sub-tehranS01_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz => sub-tehranS01_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-tehranS01/anat/{sub-tehranS01_space-other_T1w_softseg_bin.json => sub-tehranS01_space-other_T1w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-tehranS01/anat/{sub-tehranS01_space-other_T1w_softseg_bin.nii.gz => sub-tehranS01_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-tehranS01/anat/{sub-tehranS01_space-other_T2star_softseg_bin.json => sub-tehranS01_space-other_T2star_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-tehranS01/anat/{sub-tehranS01_space-other_T2star_softseg_bin.nii.gz => sub-tehranS01_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-tehranS01/anat/{sub-tehranS01_space-other_T2w_softseg_bin.json => sub-tehranS01_space-other_T2w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-tehranS01/anat/{sub-tehranS01_space-other_T2w_softseg_bin.nii.gz => sub-tehranS01_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-tehranS01/dwi/{sub-tehranS01_rec-average_dwi_softseg_bin.json => sub-tehranS01_rec-average_dwi_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-tehranS01/dwi/{sub-tehranS01_rec-average_dwi_softseg_bin.nii.gz => sub-tehranS01_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-tehranS02/anat/{sub-tehranS02_flip-1_mt-on_space-other_MTS_softseg_bin.json => sub-tehranS02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-tehranS02/anat/{sub-tehranS02_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz => sub-tehranS02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-tehranS02/anat/{sub-tehranS02_flip-2_mt-off_space-other_MTS_softseg_bin.json => sub-tehranS02_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-tehranS02/anat/{sub-tehranS02_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz => sub-tehranS02_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-tehranS02/anat/{sub-tehranS02_space-other_T1w_softseg_bin.json => sub-tehranS02_space-other_T1w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-tehranS02/anat/{sub-tehranS02_space-other_T1w_softseg_bin.nii.gz => sub-tehranS02_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-tehranS02/anat/{sub-tehranS02_space-other_T2star_softseg_bin.json => sub-tehranS02_space-other_T2star_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-tehranS02/anat/{sub-tehranS02_space-other_T2star_softseg_bin.nii.gz => sub-tehranS02_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-tehranS02/anat/{sub-tehranS02_space-other_T2w_softseg_bin.json => sub-tehranS02_space-other_T2w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-tehranS02/anat/{sub-tehranS02_space-other_T2w_softseg_bin.nii.gz => sub-tehranS02_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-tehranS02/dwi/{sub-tehranS02_rec-average_dwi_softseg_bin.json => sub-tehranS02_rec-average_dwi_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-tehranS02/dwi/{sub-tehranS02_rec-average_dwi_softseg_bin.nii.gz => sub-tehranS02_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-tehranS03/anat/{sub-tehranS03_flip-1_mt-on_space-other_MTS_softseg_bin.json => sub-tehranS03_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-tehranS03/anat/{sub-tehranS03_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz => sub-tehranS03_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-tehranS03/anat/{sub-tehranS03_flip-2_mt-off_space-other_MTS_softseg_bin.json => sub-tehranS03_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-tehranS03/anat/{sub-tehranS03_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz => sub-tehranS03_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-tehranS03/anat/{sub-tehranS03_space-other_T1w_softseg_bin.json => sub-tehranS03_space-other_T1w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-tehranS03/anat/{sub-tehranS03_space-other_T1w_softseg_bin.nii.gz => sub-tehranS03_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-tehranS03/anat/{sub-tehranS03_space-other_T2star_softseg_bin.json => sub-tehranS03_space-other_T2star_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-tehranS03/anat/{sub-tehranS03_space-other_T2star_softseg_bin.nii.gz => sub-tehranS03_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-tehranS03/anat/{sub-tehranS03_space-other_T2w_softseg_bin.json => sub-tehranS03_space-other_T2w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-tehranS03/anat/{sub-tehranS03_space-other_T2w_softseg_bin.nii.gz => sub-tehranS03_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-tehranS03/dwi/{sub-tehranS03_rec-average_dwi_softseg_bin.json => sub-tehranS03_rec-average_dwi_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-tehranS03/dwi/{sub-tehranS03_rec-average_dwi_softseg_bin.nii.gz => sub-tehranS03_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-tehranS04/anat/{sub-tehranS04_flip-1_mt-on_space-other_MTS_softseg_bin.json => sub-tehranS04_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-tehranS04/anat/{sub-tehranS04_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz => sub-tehranS04_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-tehranS04/anat/{sub-tehranS04_flip-2_mt-off_space-other_MTS_softseg_bin.json => sub-tehranS04_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-tehranS04/anat/{sub-tehranS04_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz => sub-tehranS04_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-tehranS04/anat/{sub-tehranS04_space-other_T1w_softseg_bin.json => sub-tehranS04_space-other_T1w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-tehranS04/anat/{sub-tehranS04_space-other_T1w_softseg_bin.nii.gz => sub-tehranS04_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-tehranS04/anat/{sub-tehranS04_space-other_T2star_softseg_bin.json => sub-tehranS04_space-other_T2star_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-tehranS04/anat/{sub-tehranS04_space-other_T2star_softseg_bin.nii.gz => sub-tehranS04_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-tehranS04/anat/{sub-tehranS04_space-other_T2w_softseg_bin.json => sub-tehranS04_space-other_T2w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-tehranS04/anat/{sub-tehranS04_space-other_T2w_softseg_bin.nii.gz => sub-tehranS04_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-tehranS04/dwi/{sub-tehranS04_rec-average_dwi_softseg_bin.json => sub-tehranS04_rec-average_dwi_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-tehranS04/dwi/{sub-tehranS04_rec-average_dwi_softseg_bin.nii.gz => sub-tehranS04_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-tehranS05/anat/{sub-tehranS05_flip-1_mt-on_space-other_MTS_softseg_bin.json => sub-tehranS05_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-tehranS05/anat/{sub-tehranS05_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz => sub-tehranS05_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-tehranS05/anat/{sub-tehranS05_flip-2_mt-off_space-other_MTS_softseg_bin.json => sub-tehranS05_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-tehranS05/anat/{sub-tehranS05_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz => sub-tehranS05_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-tehranS05/anat/{sub-tehranS05_space-other_T1w_softseg_bin.json => sub-tehranS05_space-other_T1w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-tehranS05/anat/{sub-tehranS05_space-other_T1w_softseg_bin.nii.gz => sub-tehranS05_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-tehranS05/anat/{sub-tehranS05_space-other_T2star_softseg_bin.json => sub-tehranS05_space-other_T2star_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-tehranS05/anat/{sub-tehranS05_space-other_T2star_softseg_bin.nii.gz => sub-tehranS05_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-tehranS05/anat/{sub-tehranS05_space-other_T2w_softseg_bin.json => sub-tehranS05_space-other_T2w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-tehranS05/anat/{sub-tehranS05_space-other_T2w_softseg_bin.nii.gz => sub-tehranS05_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-tehranS05/dwi/{sub-tehranS05_rec-average_dwi_softseg_bin.json => sub-tehranS05_rec-average_dwi_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-tehranS05/dwi/{sub-tehranS05_rec-average_dwi_softseg_bin.nii.gz => sub-tehranS05_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-tehranS06/anat/{sub-tehranS06_flip-1_mt-on_space-other_MTS_softseg_bin.json => sub-tehranS06_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-tehranS06/anat/{sub-tehranS06_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz => sub-tehranS06_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-tehranS06/anat/{sub-tehranS06_flip-2_mt-off_space-other_MTS_softseg_bin.json => sub-tehranS06_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-tehranS06/anat/{sub-tehranS06_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz => sub-tehranS06_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-tehranS06/anat/{sub-tehranS06_space-other_T1w_softseg_bin.json => sub-tehranS06_space-other_T1w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-tehranS06/anat/{sub-tehranS06_space-other_T1w_softseg_bin.nii.gz => sub-tehranS06_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-tehranS06/anat/{sub-tehranS06_space-other_T2star_softseg_bin.json => sub-tehranS06_space-other_T2star_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-tehranS06/anat/{sub-tehranS06_space-other_T2star_softseg_bin.nii.gz => sub-tehranS06_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-tehranS06/anat/{sub-tehranS06_space-other_T2w_softseg_bin.json => sub-tehranS06_space-other_T2w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-tehranS06/anat/{sub-tehranS06_space-other_T2w_softseg_bin.nii.gz => sub-tehranS06_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-tehranS06/dwi/{sub-tehranS06_rec-average_dwi_softseg_bin.json => sub-tehranS06_rec-average_dwi_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-tehranS06/dwi/{sub-tehranS06_rec-average_dwi_softseg_bin.nii.gz => sub-tehranS06_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-tokyo750w01/anat/{sub-tokyo750w01_flip-1_mt-on_space-other_MTS_softseg_bin.json => sub-tokyo750w01_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-tokyo750w01/anat/{sub-tokyo750w01_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz => sub-tokyo750w01_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-tokyo750w01/anat/{sub-tokyo750w01_flip-2_mt-off_space-other_MTS_softseg_bin.json => sub-tokyo750w01_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-tokyo750w01/anat/{sub-tokyo750w01_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz => sub-tokyo750w01_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-tokyo750w01/anat/{sub-tokyo750w01_space-other_T1w_softseg_bin.json => sub-tokyo750w01_space-other_T1w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-tokyo750w01/anat/{sub-tokyo750w01_space-other_T1w_softseg_bin.nii.gz => sub-tokyo750w01_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-tokyo750w01/anat/{sub-tokyo750w01_space-other_T2star_softseg_bin.json => sub-tokyo750w01_space-other_T2star_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-tokyo750w01/anat/{sub-tokyo750w01_space-other_T2star_softseg_bin.nii.gz => sub-tokyo750w01_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-tokyo750w01/anat/{sub-tokyo750w01_space-other_T2w_softseg_bin.json => sub-tokyo750w01_space-other_T2w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-tokyo750w01/anat/{sub-tokyo750w01_space-other_T2w_softseg_bin.nii.gz => sub-tokyo750w01_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-tokyo750w01/dwi/{sub-tokyo750w01_rec-average_dwi_softseg_bin.json => sub-tokyo750w01_rec-average_dwi_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-tokyo750w01/dwi/{sub-tokyo750w01_rec-average_dwi_softseg_bin.nii.gz => sub-tokyo750w01_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-tokyo750w02/anat/{sub-tokyo750w02_flip-1_mt-on_space-other_MTS_softseg_bin.json => sub-tokyo750w02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-tokyo750w02/anat/{sub-tokyo750w02_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz => sub-tokyo750w02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-tokyo750w02/anat/{sub-tokyo750w02_flip-2_mt-off_space-other_MTS_softseg_bin.json => sub-tokyo750w02_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-tokyo750w02/anat/{sub-tokyo750w02_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz => sub-tokyo750w02_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-tokyo750w02/anat/{sub-tokyo750w02_space-other_T1w_softseg_bin.json => sub-tokyo750w02_space-other_T1w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-tokyo750w02/anat/{sub-tokyo750w02_space-other_T1w_softseg_bin.nii.gz => sub-tokyo750w02_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-tokyo750w02/anat/{sub-tokyo750w02_space-other_T2star_softseg_bin.json => sub-tokyo750w02_space-other_T2star_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-tokyo750w02/anat/{sub-tokyo750w02_space-other_T2star_softseg_bin.nii.gz => sub-tokyo750w02_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-tokyo750w02/anat/{sub-tokyo750w02_space-other_T2w_softseg_bin.json => sub-tokyo750w02_space-other_T2w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-tokyo750w02/anat/{sub-tokyo750w02_space-other_T2w_softseg_bin.nii.gz => sub-tokyo750w02_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-tokyo750w02/dwi/{sub-tokyo750w02_rec-average_dwi_softseg_bin.json => sub-tokyo750w02_rec-average_dwi_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-tokyo750w02/dwi/{sub-tokyo750w02_rec-average_dwi_softseg_bin.nii.gz => sub-tokyo750w02_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-tokyo750w03/anat/{sub-tokyo750w03_flip-1_mt-on_space-other_MTS_softseg_bin.json => sub-tokyo750w03_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-tokyo750w03/anat/{sub-tokyo750w03_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz => sub-tokyo750w03_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-tokyo750w03/anat/{sub-tokyo750w03_flip-2_mt-off_space-other_MTS_softseg_bin.json => sub-tokyo750w03_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-tokyo750w03/anat/{sub-tokyo750w03_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz => sub-tokyo750w03_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-tokyo750w03/anat/{sub-tokyo750w03_space-other_T1w_softseg_bin.json => sub-tokyo750w03_space-other_T1w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-tokyo750w03/anat/{sub-tokyo750w03_space-other_T1w_softseg_bin.nii.gz => sub-tokyo750w03_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-tokyo750w03/anat/{sub-tokyo750w03_space-other_T2star_softseg_bin.json => sub-tokyo750w03_space-other_T2star_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-tokyo750w03/anat/{sub-tokyo750w03_space-other_T2star_softseg_bin.nii.gz => sub-tokyo750w03_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-tokyo750w03/anat/{sub-tokyo750w03_space-other_T2w_softseg_bin.json => sub-tokyo750w03_space-other_T2w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-tokyo750w03/anat/{sub-tokyo750w03_space-other_T2w_softseg_bin.nii.gz => sub-tokyo750w03_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-tokyo750w03/dwi/{sub-tokyo750w03_rec-average_dwi_softseg_bin.json => sub-tokyo750w03_rec-average_dwi_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-tokyo750w03/dwi/{sub-tokyo750w03_rec-average_dwi_softseg_bin.nii.gz => sub-tokyo750w03_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-tokyo750w04/anat/{sub-tokyo750w04_flip-1_mt-on_space-other_MTS_softseg_bin.json => sub-tokyo750w04_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-tokyo750w04/anat/{sub-tokyo750w04_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz => sub-tokyo750w04_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-tokyo750w04/anat/{sub-tokyo750w04_flip-2_mt-off_space-other_MTS_softseg_bin.json => sub-tokyo750w04_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-tokyo750w04/anat/{sub-tokyo750w04_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz => sub-tokyo750w04_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-tokyo750w04/anat/{sub-tokyo750w04_space-other_T1w_softseg_bin.json => sub-tokyo750w04_space-other_T1w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-tokyo750w04/anat/{sub-tokyo750w04_space-other_T1w_softseg_bin.nii.gz => sub-tokyo750w04_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-tokyo750w04/anat/{sub-tokyo750w04_space-other_T2star_softseg_bin.json => sub-tokyo750w04_space-other_T2star_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-tokyo750w04/anat/{sub-tokyo750w04_space-other_T2star_softseg_bin.nii.gz => sub-tokyo750w04_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-tokyo750w04/anat/{sub-tokyo750w04_space-other_T2w_softseg_bin.json => sub-tokyo750w04_space-other_T2w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-tokyo750w04/anat/{sub-tokyo750w04_space-other_T2w_softseg_bin.nii.gz => sub-tokyo750w04_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-tokyo750w04/dwi/{sub-tokyo750w04_rec-average_dwi_softseg_bin.json => sub-tokyo750w04_rec-average_dwi_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-tokyo750w04/dwi/{sub-tokyo750w04_rec-average_dwi_softseg_bin.nii.gz => sub-tokyo750w04_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-tokyo750w05/anat/{sub-tokyo750w05_flip-1_mt-on_space-other_MTS_softseg_bin.json => sub-tokyo750w05_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-tokyo750w05/anat/{sub-tokyo750w05_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz => sub-tokyo750w05_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-tokyo750w05/anat/{sub-tokyo750w05_flip-2_mt-off_space-other_MTS_softseg_bin.json => sub-tokyo750w05_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-tokyo750w05/anat/{sub-tokyo750w05_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz => sub-tokyo750w05_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-tokyo750w05/anat/{sub-tokyo750w05_space-other_T1w_softseg_bin.json => sub-tokyo750w05_space-other_T1w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-tokyo750w05/anat/{sub-tokyo750w05_space-other_T1w_softseg_bin.nii.gz => sub-tokyo750w05_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-tokyo750w05/anat/{sub-tokyo750w05_space-other_T2star_softseg_bin.json => sub-tokyo750w05_space-other_T2star_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-tokyo750w05/anat/{sub-tokyo750w05_space-other_T2star_softseg_bin.nii.gz => sub-tokyo750w05_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-tokyo750w05/anat/{sub-tokyo750w05_space-other_T2w_softseg_bin.json => sub-tokyo750w05_space-other_T2w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-tokyo750w05/anat/{sub-tokyo750w05_space-other_T2w_softseg_bin.nii.gz => sub-tokyo750w05_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-tokyo750w05/dwi/{sub-tokyo750w05_rec-average_dwi_softseg_bin.json => sub-tokyo750w05_rec-average_dwi_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-tokyo750w05/dwi/{sub-tokyo750w05_rec-average_dwi_softseg_bin.nii.gz => sub-tokyo750w05_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-tokyo750w06/anat/{sub-tokyo750w06_flip-1_mt-on_space-other_MTS_softseg_bin.json => sub-tokyo750w06_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-tokyo750w06/anat/{sub-tokyo750w06_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz => sub-tokyo750w06_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-tokyo750w06/anat/{sub-tokyo750w06_flip-2_mt-off_space-other_MTS_softseg_bin.json => sub-tokyo750w06_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-tokyo750w06/anat/{sub-tokyo750w06_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz => sub-tokyo750w06_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-tokyo750w06/anat/{sub-tokyo750w06_space-other_T1w_softseg_bin.json => sub-tokyo750w06_space-other_T1w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-tokyo750w06/anat/{sub-tokyo750w06_space-other_T1w_softseg_bin.nii.gz => sub-tokyo750w06_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-tokyo750w06/anat/{sub-tokyo750w06_space-other_T2star_softseg_bin.json => sub-tokyo750w06_space-other_T2star_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-tokyo750w06/anat/{sub-tokyo750w06_space-other_T2star_softseg_bin.nii.gz => sub-tokyo750w06_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-tokyo750w06/anat/{sub-tokyo750w06_space-other_T2w_softseg_bin.json => sub-tokyo750w06_space-other_T2w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-tokyo750w06/anat/{sub-tokyo750w06_space-other_T2w_softseg_bin.nii.gz => sub-tokyo750w06_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-tokyo750w06/dwi/{sub-tokyo750w06_rec-average_dwi_softseg_bin.json => sub-tokyo750w06_rec-average_dwi_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-tokyo750w06/dwi/{sub-tokyo750w06_rec-average_dwi_softseg_bin.nii.gz => sub-tokyo750w06_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-tokyo750w07/anat/{sub-tokyo750w07_flip-1_mt-on_space-other_MTS_softseg_bin.json => sub-tokyo750w07_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-tokyo750w07/anat/{sub-tokyo750w07_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz => sub-tokyo750w07_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-tokyo750w07/anat/{sub-tokyo750w07_flip-2_mt-off_space-other_MTS_softseg_bin.json => sub-tokyo750w07_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-tokyo750w07/anat/{sub-tokyo750w07_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz => sub-tokyo750w07_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-tokyo750w07/anat/{sub-tokyo750w07_space-other_T1w_softseg_bin.json => sub-tokyo750w07_space-other_T1w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-tokyo750w07/anat/{sub-tokyo750w07_space-other_T1w_softseg_bin.nii.gz => sub-tokyo750w07_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-tokyo750w07/anat/{sub-tokyo750w07_space-other_T2star_softseg_bin.json => sub-tokyo750w07_space-other_T2star_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-tokyo750w07/anat/{sub-tokyo750w07_space-other_T2star_softseg_bin.nii.gz => sub-tokyo750w07_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-tokyo750w07/anat/{sub-tokyo750w07_space-other_T2w_softseg_bin.json => sub-tokyo750w07_space-other_T2w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-tokyo750w07/anat/{sub-tokyo750w07_space-other_T2w_softseg_bin.nii.gz => sub-tokyo750w07_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-tokyo750w07/dwi/{sub-tokyo750w07_rec-average_dwi_softseg_bin.json => sub-tokyo750w07_rec-average_dwi_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-tokyo750w07/dwi/{sub-tokyo750w07_rec-average_dwi_softseg_bin.nii.gz => sub-tokyo750w07_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-tokyoIngenia01/anat/{sub-tokyoIngenia01_flip-1_mt-on_space-other_MTS_softseg_bin.json => sub-tokyoIngenia01_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-tokyoIngenia01/anat/{sub-tokyoIngenia01_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz => sub-tokyoIngenia01_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-tokyoIngenia01/anat/{sub-tokyoIngenia01_flip-2_mt-off_space-other_MTS_softseg_bin.json => sub-tokyoIngenia01_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-tokyoIngenia01/anat/{sub-tokyoIngenia01_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz => sub-tokyoIngenia01_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-tokyoIngenia01/anat/{sub-tokyoIngenia01_space-other_T1w_softseg_bin.json => sub-tokyoIngenia01_space-other_T1w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-tokyoIngenia01/anat/{sub-tokyoIngenia01_space-other_T1w_softseg_bin.nii.gz => sub-tokyoIngenia01_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-tokyoIngenia01/anat/{sub-tokyoIngenia01_space-other_T2star_softseg_bin.json => sub-tokyoIngenia01_space-other_T2star_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-tokyoIngenia01/anat/{sub-tokyoIngenia01_space-other_T2star_softseg_bin.nii.gz => sub-tokyoIngenia01_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-tokyoIngenia01/anat/{sub-tokyoIngenia01_space-other_T2w_softseg_bin.json => sub-tokyoIngenia01_space-other_T2w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-tokyoIngenia01/anat/{sub-tokyoIngenia01_space-other_T2w_softseg_bin.nii.gz => sub-tokyoIngenia01_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-tokyoIngenia01/dwi/{sub-tokyoIngenia01_rec-average_dwi_softseg_bin.json => sub-tokyoIngenia01_rec-average_dwi_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-tokyoIngenia01/dwi/{sub-tokyoIngenia01_rec-average_dwi_softseg_bin.nii.gz => sub-tokyoIngenia01_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-tokyoIngenia02/anat/{sub-tokyoIngenia02_flip-1_mt-on_space-other_MTS_softseg_bin.json => sub-tokyoIngenia02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-tokyoIngenia02/anat/{sub-tokyoIngenia02_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz => sub-tokyoIngenia02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-tokyoIngenia02/anat/{sub-tokyoIngenia02_flip-2_mt-off_space-other_MTS_softseg_bin.json => sub-tokyoIngenia02_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-tokyoIngenia02/anat/{sub-tokyoIngenia02_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz => sub-tokyoIngenia02_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-tokyoIngenia02/anat/{sub-tokyoIngenia02_space-other_T1w_softseg_bin.json => sub-tokyoIngenia02_space-other_T1w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-tokyoIngenia02/anat/{sub-tokyoIngenia02_space-other_T1w_softseg_bin.nii.gz => sub-tokyoIngenia02_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-tokyoIngenia02/anat/{sub-tokyoIngenia02_space-other_T2star_softseg_bin.json => sub-tokyoIngenia02_space-other_T2star_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-tokyoIngenia02/anat/{sub-tokyoIngenia02_space-other_T2star_softseg_bin.nii.gz => sub-tokyoIngenia02_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-tokyoIngenia02/anat/{sub-tokyoIngenia02_space-other_T2w_softseg_bin.json => sub-tokyoIngenia02_space-other_T2w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-tokyoIngenia02/anat/{sub-tokyoIngenia02_space-other_T2w_softseg_bin.nii.gz => sub-tokyoIngenia02_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-tokyoIngenia02/dwi/{sub-tokyoIngenia02_rec-average_dwi_softseg_bin.json => sub-tokyoIngenia02_rec-average_dwi_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-tokyoIngenia02/dwi/{sub-tokyoIngenia02_rec-average_dwi_softseg_bin.nii.gz => sub-tokyoIngenia02_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-tokyoIngenia03/anat/{sub-tokyoIngenia03_flip-1_mt-on_space-other_MTS_softseg_bin.json => sub-tokyoIngenia03_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-tokyoIngenia03/anat/{sub-tokyoIngenia03_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz => sub-tokyoIngenia03_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-tokyoIngenia03/anat/{sub-tokyoIngenia03_flip-2_mt-off_space-other_MTS_softseg_bin.json => sub-tokyoIngenia03_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-tokyoIngenia03/anat/{sub-tokyoIngenia03_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz => sub-tokyoIngenia03_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-tokyoIngenia03/anat/{sub-tokyoIngenia03_space-other_T1w_softseg_bin.json => sub-tokyoIngenia03_space-other_T1w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-tokyoIngenia03/anat/{sub-tokyoIngenia03_space-other_T1w_softseg_bin.nii.gz => sub-tokyoIngenia03_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-tokyoIngenia03/anat/{sub-tokyoIngenia03_space-other_T2star_softseg_bin.json => sub-tokyoIngenia03_space-other_T2star_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-tokyoIngenia03/anat/{sub-tokyoIngenia03_space-other_T2star_softseg_bin.nii.gz => sub-tokyoIngenia03_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-tokyoIngenia03/anat/{sub-tokyoIngenia03_space-other_T2w_softseg_bin.json => sub-tokyoIngenia03_space-other_T2w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-tokyoIngenia03/anat/{sub-tokyoIngenia03_space-other_T2w_softseg_bin.nii.gz => sub-tokyoIngenia03_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-tokyoIngenia03/dwi/{sub-tokyoIngenia03_rec-average_dwi_softseg_bin.json => sub-tokyoIngenia03_rec-average_dwi_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-tokyoIngenia03/dwi/{sub-tokyoIngenia03_rec-average_dwi_softseg_bin.nii.gz => sub-tokyoIngenia03_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-tokyoIngenia04/anat/{sub-tokyoIngenia04_flip-1_mt-on_space-other_MTS_softseg_bin.json => sub-tokyoIngenia04_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-tokyoIngenia04/anat/{sub-tokyoIngenia04_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz => sub-tokyoIngenia04_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-tokyoIngenia04/anat/{sub-tokyoIngenia04_flip-2_mt-off_space-other_MTS_softseg_bin.json => sub-tokyoIngenia04_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-tokyoIngenia04/anat/{sub-tokyoIngenia04_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz => sub-tokyoIngenia04_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-tokyoIngenia04/anat/{sub-tokyoIngenia04_space-other_T1w_softseg_bin.json => sub-tokyoIngenia04_space-other_T1w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-tokyoIngenia04/anat/{sub-tokyoIngenia04_space-other_T1w_softseg_bin.nii.gz => sub-tokyoIngenia04_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-tokyoIngenia04/anat/{sub-tokyoIngenia04_space-other_T2star_softseg_bin.json => sub-tokyoIngenia04_space-other_T2star_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-tokyoIngenia04/anat/{sub-tokyoIngenia04_space-other_T2star_softseg_bin.nii.gz => sub-tokyoIngenia04_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-tokyoIngenia04/anat/{sub-tokyoIngenia04_space-other_T2w_softseg_bin.json => sub-tokyoIngenia04_space-other_T2w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-tokyoIngenia04/anat/{sub-tokyoIngenia04_space-other_T2w_softseg_bin.nii.gz => sub-tokyoIngenia04_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-tokyoIngenia04/dwi/{sub-tokyoIngenia04_rec-average_dwi_softseg_bin.json => sub-tokyoIngenia04_rec-average_dwi_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-tokyoIngenia04/dwi/{sub-tokyoIngenia04_rec-average_dwi_softseg_bin.nii.gz => sub-tokyoIngenia04_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-tokyoIngenia05/anat/{sub-tokyoIngenia05_flip-1_mt-on_space-other_MTS_softseg_bin.json => sub-tokyoIngenia05_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-tokyoIngenia05/anat/{sub-tokyoIngenia05_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz => sub-tokyoIngenia05_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-tokyoIngenia05/anat/{sub-tokyoIngenia05_flip-2_mt-off_space-other_MTS_softseg_bin.json => sub-tokyoIngenia05_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-tokyoIngenia05/anat/{sub-tokyoIngenia05_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz => sub-tokyoIngenia05_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-tokyoIngenia05/anat/{sub-tokyoIngenia05_space-other_T1w_softseg_bin.json => sub-tokyoIngenia05_space-other_T1w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-tokyoIngenia05/anat/{sub-tokyoIngenia05_space-other_T1w_softseg_bin.nii.gz => sub-tokyoIngenia05_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-tokyoIngenia05/anat/{sub-tokyoIngenia05_space-other_T2star_softseg_bin.json => sub-tokyoIngenia05_space-other_T2star_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-tokyoIngenia05/anat/{sub-tokyoIngenia05_space-other_T2star_softseg_bin.nii.gz => sub-tokyoIngenia05_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-tokyoIngenia05/anat/{sub-tokyoIngenia05_space-other_T2w_softseg_bin.json => sub-tokyoIngenia05_space-other_T2w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-tokyoIngenia05/anat/{sub-tokyoIngenia05_space-other_T2w_softseg_bin.nii.gz => sub-tokyoIngenia05_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-tokyoIngenia05/dwi/{sub-tokyoIngenia05_rec-average_dwi_softseg_bin.json => sub-tokyoIngenia05_rec-average_dwi_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-tokyoIngenia05/dwi/{sub-tokyoIngenia05_rec-average_dwi_softseg_bin.nii.gz => sub-tokyoIngenia05_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-tokyoIngenia06/anat/{sub-tokyoIngenia06_flip-1_mt-on_space-other_MTS_softseg_bin.json => sub-tokyoIngenia06_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-tokyoIngenia06/anat/{sub-tokyoIngenia06_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz => sub-tokyoIngenia06_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-tokyoIngenia06/anat/{sub-tokyoIngenia06_flip-2_mt-off_space-other_MTS_softseg_bin.json => sub-tokyoIngenia06_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-tokyoIngenia06/anat/{sub-tokyoIngenia06_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz => sub-tokyoIngenia06_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-tokyoIngenia06/anat/{sub-tokyoIngenia06_space-other_T1w_softseg_bin.json => sub-tokyoIngenia06_space-other_T1w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-tokyoIngenia06/anat/{sub-tokyoIngenia06_space-other_T1w_softseg_bin.nii.gz => sub-tokyoIngenia06_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-tokyoIngenia06/anat/{sub-tokyoIngenia06_space-other_T2star_softseg_bin.json => sub-tokyoIngenia06_space-other_T2star_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-tokyoIngenia06/anat/{sub-tokyoIngenia06_space-other_T2star_softseg_bin.nii.gz => sub-tokyoIngenia06_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-tokyoIngenia06/anat/{sub-tokyoIngenia06_space-other_T2w_softseg_bin.json => sub-tokyoIngenia06_space-other_T2w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-tokyoIngenia06/anat/{sub-tokyoIngenia06_space-other_T2w_softseg_bin.nii.gz => sub-tokyoIngenia06_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-tokyoIngenia06/dwi/{sub-tokyoIngenia06_rec-average_dwi_softseg_bin.json => sub-tokyoIngenia06_rec-average_dwi_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-tokyoIngenia06/dwi/{sub-tokyoIngenia06_rec-average_dwi_softseg_bin.nii.gz => sub-tokyoIngenia06_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-tokyoIngenia07/anat/{sub-tokyoIngenia07_flip-1_mt-on_space-other_MTS_softseg_bin.json => sub-tokyoIngenia07_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-tokyoIngenia07/anat/{sub-tokyoIngenia07_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz => sub-tokyoIngenia07_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-tokyoIngenia07/anat/{sub-tokyoIngenia07_flip-2_mt-off_space-other_MTS_softseg_bin.json => sub-tokyoIngenia07_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-tokyoIngenia07/anat/{sub-tokyoIngenia07_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz => sub-tokyoIngenia07_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-tokyoIngenia07/anat/{sub-tokyoIngenia07_space-other_T1w_softseg_bin.json => sub-tokyoIngenia07_space-other_T1w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-tokyoIngenia07/anat/{sub-tokyoIngenia07_space-other_T1w_softseg_bin.nii.gz => sub-tokyoIngenia07_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-tokyoIngenia07/anat/{sub-tokyoIngenia07_space-other_T2star_softseg_bin.json => sub-tokyoIngenia07_space-other_T2star_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-tokyoIngenia07/anat/{sub-tokyoIngenia07_space-other_T2star_softseg_bin.nii.gz => sub-tokyoIngenia07_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-tokyoIngenia07/anat/{sub-tokyoIngenia07_space-other_T2w_softseg_bin.json => sub-tokyoIngenia07_space-other_T2w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-tokyoIngenia07/anat/{sub-tokyoIngenia07_space-other_T2w_softseg_bin.nii.gz => sub-tokyoIngenia07_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-tokyoIngenia07/dwi/{sub-tokyoIngenia07_rec-average_dwi_softseg_bin.json => sub-tokyoIngenia07_rec-average_dwi_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-tokyoIngenia07/dwi/{sub-tokyoIngenia07_rec-average_dwi_softseg_bin.nii.gz => sub-tokyoIngenia07_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-tokyoSkyra01/anat/{sub-tokyoSkyra01_flip-1_mt-on_space-other_MTS_softseg_bin.json => sub-tokyoSkyra01_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-tokyoSkyra01/anat/{sub-tokyoSkyra01_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz => sub-tokyoSkyra01_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-tokyoSkyra01/anat/{sub-tokyoSkyra01_flip-2_mt-off_space-other_MTS_softseg_bin.json => sub-tokyoSkyra01_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-tokyoSkyra01/anat/{sub-tokyoSkyra01_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz => sub-tokyoSkyra01_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-tokyoSkyra01/anat/{sub-tokyoSkyra01_space-other_T1w_softseg_bin.json => sub-tokyoSkyra01_space-other_T1w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-tokyoSkyra01/anat/{sub-tokyoSkyra01_space-other_T1w_softseg_bin.nii.gz => sub-tokyoSkyra01_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-tokyoSkyra01/anat/{sub-tokyoSkyra01_space-other_T2star_softseg_bin.json => sub-tokyoSkyra01_space-other_T2star_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-tokyoSkyra01/anat/{sub-tokyoSkyra01_space-other_T2star_softseg_bin.nii.gz => sub-tokyoSkyra01_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-tokyoSkyra01/anat/{sub-tokyoSkyra01_space-other_T2w_softseg_bin.json => sub-tokyoSkyra01_space-other_T2w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-tokyoSkyra01/anat/{sub-tokyoSkyra01_space-other_T2w_softseg_bin.nii.gz => sub-tokyoSkyra01_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-tokyoSkyra01/dwi/{sub-tokyoSkyra01_rec-average_dwi_softseg_bin.json => sub-tokyoSkyra01_rec-average_dwi_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-tokyoSkyra01/dwi/{sub-tokyoSkyra01_rec-average_dwi_softseg_bin.nii.gz => sub-tokyoSkyra01_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-tokyoSkyra02/anat/{sub-tokyoSkyra02_flip-1_mt-on_space-other_MTS_softseg_bin.json => sub-tokyoSkyra02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-tokyoSkyra02/anat/{sub-tokyoSkyra02_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz => sub-tokyoSkyra02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-tokyoSkyra02/anat/{sub-tokyoSkyra02_flip-2_mt-off_space-other_MTS_softseg_bin.json => sub-tokyoSkyra02_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-tokyoSkyra02/anat/{sub-tokyoSkyra02_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz => sub-tokyoSkyra02_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-tokyoSkyra02/anat/{sub-tokyoSkyra02_space-other_T1w_softseg_bin.json => sub-tokyoSkyra02_space-other_T1w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-tokyoSkyra02/anat/{sub-tokyoSkyra02_space-other_T1w_softseg_bin.nii.gz => sub-tokyoSkyra02_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-tokyoSkyra02/anat/{sub-tokyoSkyra02_space-other_T2star_softseg_bin.json => sub-tokyoSkyra02_space-other_T2star_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-tokyoSkyra02/anat/{sub-tokyoSkyra02_space-other_T2star_softseg_bin.nii.gz => sub-tokyoSkyra02_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-tokyoSkyra02/anat/{sub-tokyoSkyra02_space-other_T2w_softseg_bin.json => sub-tokyoSkyra02_space-other_T2w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-tokyoSkyra02/anat/{sub-tokyoSkyra02_space-other_T2w_softseg_bin.nii.gz => sub-tokyoSkyra02_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-tokyoSkyra02/dwi/{sub-tokyoSkyra02_rec-average_dwi_softseg_bin.json => sub-tokyoSkyra02_rec-average_dwi_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-tokyoSkyra02/dwi/{sub-tokyoSkyra02_rec-average_dwi_softseg_bin.nii.gz => sub-tokyoSkyra02_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-tokyoSkyra03/anat/{sub-tokyoSkyra03_flip-1_mt-on_space-other_MTS_softseg_bin.json => sub-tokyoSkyra03_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-tokyoSkyra03/anat/{sub-tokyoSkyra03_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz => sub-tokyoSkyra03_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-tokyoSkyra03/anat/{sub-tokyoSkyra03_flip-2_mt-off_space-other_MTS_softseg_bin.json => sub-tokyoSkyra03_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-tokyoSkyra03/anat/{sub-tokyoSkyra03_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz => sub-tokyoSkyra03_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-tokyoSkyra03/anat/{sub-tokyoSkyra03_space-other_T1w_softseg_bin.json => sub-tokyoSkyra03_space-other_T1w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-tokyoSkyra03/anat/{sub-tokyoSkyra03_space-other_T1w_softseg_bin.nii.gz => sub-tokyoSkyra03_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-tokyoSkyra03/anat/{sub-tokyoSkyra03_space-other_T2star_softseg_bin.json => sub-tokyoSkyra03_space-other_T2star_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-tokyoSkyra03/anat/{sub-tokyoSkyra03_space-other_T2star_softseg_bin.nii.gz => sub-tokyoSkyra03_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-tokyoSkyra03/anat/{sub-tokyoSkyra03_space-other_T2w_softseg_bin.json => sub-tokyoSkyra03_space-other_T2w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-tokyoSkyra03/anat/{sub-tokyoSkyra03_space-other_T2w_softseg_bin.nii.gz => sub-tokyoSkyra03_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-tokyoSkyra03/dwi/{sub-tokyoSkyra03_rec-average_dwi_softseg_bin.json => sub-tokyoSkyra03_rec-average_dwi_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-tokyoSkyra03/dwi/{sub-tokyoSkyra03_rec-average_dwi_softseg_bin.nii.gz => sub-tokyoSkyra03_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-tokyoSkyra04/anat/{sub-tokyoSkyra04_flip-1_mt-on_space-other_MTS_softseg_bin.json => sub-tokyoSkyra04_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-tokyoSkyra04/anat/{sub-tokyoSkyra04_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz => sub-tokyoSkyra04_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-tokyoSkyra04/anat/{sub-tokyoSkyra04_flip-2_mt-off_space-other_MTS_softseg_bin.json => sub-tokyoSkyra04_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-tokyoSkyra04/anat/{sub-tokyoSkyra04_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz => sub-tokyoSkyra04_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-tokyoSkyra04/anat/{sub-tokyoSkyra04_space-other_T1w_softseg_bin.json => sub-tokyoSkyra04_space-other_T1w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-tokyoSkyra04/anat/{sub-tokyoSkyra04_space-other_T1w_softseg_bin.nii.gz => sub-tokyoSkyra04_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-tokyoSkyra04/anat/{sub-tokyoSkyra04_space-other_T2star_softseg_bin.json => sub-tokyoSkyra04_space-other_T2star_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-tokyoSkyra04/anat/{sub-tokyoSkyra04_space-other_T2star_softseg_bin.nii.gz => sub-tokyoSkyra04_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-tokyoSkyra04/anat/{sub-tokyoSkyra04_space-other_T2w_softseg_bin.json => sub-tokyoSkyra04_space-other_T2w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-tokyoSkyra04/anat/{sub-tokyoSkyra04_space-other_T2w_softseg_bin.nii.gz => sub-tokyoSkyra04_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-tokyoSkyra04/dwi/{sub-tokyoSkyra04_rec-average_dwi_softseg_bin.json => sub-tokyoSkyra04_rec-average_dwi_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-tokyoSkyra04/dwi/{sub-tokyoSkyra04_rec-average_dwi_softseg_bin.nii.gz => sub-tokyoSkyra04_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-tokyoSkyra05/anat/{sub-tokyoSkyra05_flip-1_mt-on_space-other_MTS_softseg_bin.json => sub-tokyoSkyra05_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-tokyoSkyra05/anat/{sub-tokyoSkyra05_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz => sub-tokyoSkyra05_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-tokyoSkyra05/anat/{sub-tokyoSkyra05_flip-2_mt-off_space-other_MTS_softseg_bin.json => sub-tokyoSkyra05_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-tokyoSkyra05/anat/{sub-tokyoSkyra05_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz => sub-tokyoSkyra05_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-tokyoSkyra05/anat/{sub-tokyoSkyra05_space-other_T1w_softseg_bin.json => sub-tokyoSkyra05_space-other_T1w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-tokyoSkyra05/anat/{sub-tokyoSkyra05_space-other_T1w_softseg_bin.nii.gz => sub-tokyoSkyra05_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-tokyoSkyra05/anat/{sub-tokyoSkyra05_space-other_T2star_softseg_bin.json => sub-tokyoSkyra05_space-other_T2star_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-tokyoSkyra05/anat/{sub-tokyoSkyra05_space-other_T2star_softseg_bin.nii.gz => sub-tokyoSkyra05_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-tokyoSkyra05/anat/{sub-tokyoSkyra05_space-other_T2w_softseg_bin.json => sub-tokyoSkyra05_space-other_T2w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-tokyoSkyra05/anat/{sub-tokyoSkyra05_space-other_T2w_softseg_bin.nii.gz => sub-tokyoSkyra05_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-tokyoSkyra05/dwi/{sub-tokyoSkyra05_rec-average_dwi_softseg_bin.json => sub-tokyoSkyra05_rec-average_dwi_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-tokyoSkyra05/dwi/{sub-tokyoSkyra05_rec-average_dwi_softseg_bin.nii.gz => sub-tokyoSkyra05_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-tokyoSkyra06/anat/{sub-tokyoSkyra06_flip-1_mt-on_space-other_MTS_softseg_bin.json => sub-tokyoSkyra06_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-tokyoSkyra06/anat/{sub-tokyoSkyra06_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz => sub-tokyoSkyra06_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-tokyoSkyra06/anat/{sub-tokyoSkyra06_flip-2_mt-off_space-other_MTS_softseg_bin.json => sub-tokyoSkyra06_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-tokyoSkyra06/anat/{sub-tokyoSkyra06_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz => sub-tokyoSkyra06_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-tokyoSkyra06/anat/{sub-tokyoSkyra06_space-other_T1w_softseg_bin.json => sub-tokyoSkyra06_space-other_T1w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-tokyoSkyra06/anat/{sub-tokyoSkyra06_space-other_T1w_softseg_bin.nii.gz => sub-tokyoSkyra06_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-tokyoSkyra06/anat/{sub-tokyoSkyra06_space-other_T2star_softseg_bin.json => sub-tokyoSkyra06_space-other_T2star_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-tokyoSkyra06/anat/{sub-tokyoSkyra06_space-other_T2star_softseg_bin.nii.gz => sub-tokyoSkyra06_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-tokyoSkyra06/anat/{sub-tokyoSkyra06_space-other_T2w_softseg_bin.json => sub-tokyoSkyra06_space-other_T2w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-tokyoSkyra06/anat/{sub-tokyoSkyra06_space-other_T2w_softseg_bin.nii.gz => sub-tokyoSkyra06_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-tokyoSkyra06/dwi/{sub-tokyoSkyra06_rec-average_dwi_softseg_bin.json => sub-tokyoSkyra06_rec-average_dwi_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-tokyoSkyra06/dwi/{sub-tokyoSkyra06_rec-average_dwi_softseg_bin.nii.gz => sub-tokyoSkyra06_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-tokyoSkyra07/anat/{sub-tokyoSkyra07_flip-1_mt-on_space-other_MTS_softseg_bin.json => sub-tokyoSkyra07_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-tokyoSkyra07/anat/{sub-tokyoSkyra07_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz => sub-tokyoSkyra07_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-tokyoSkyra07/anat/{sub-tokyoSkyra07_flip-2_mt-off_space-other_MTS_softseg_bin.json => sub-tokyoSkyra07_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-tokyoSkyra07/anat/{sub-tokyoSkyra07_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz => sub-tokyoSkyra07_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-tokyoSkyra07/anat/{sub-tokyoSkyra07_space-other_T1w_softseg_bin.json => sub-tokyoSkyra07_space-other_T1w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-tokyoSkyra07/anat/{sub-tokyoSkyra07_space-other_T1w_softseg_bin.nii.gz => sub-tokyoSkyra07_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-tokyoSkyra07/anat/{sub-tokyoSkyra07_space-other_T2star_softseg_bin.json => sub-tokyoSkyra07_space-other_T2star_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-tokyoSkyra07/anat/{sub-tokyoSkyra07_space-other_T2star_softseg_bin.nii.gz => sub-tokyoSkyra07_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-tokyoSkyra07/anat/{sub-tokyoSkyra07_space-other_T2w_softseg_bin.json => sub-tokyoSkyra07_space-other_T2w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-tokyoSkyra07/anat/{sub-tokyoSkyra07_space-other_T2w_softseg_bin.nii.gz => sub-tokyoSkyra07_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-tokyoSkyra07/dwi/{sub-tokyoSkyra07_rec-average_dwi_softseg_bin.json => sub-tokyoSkyra07_rec-average_dwi_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-tokyoSkyra07/dwi/{sub-tokyoSkyra07_rec-average_dwi_softseg_bin.nii.gz => sub-tokyoSkyra07_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-ubc02/anat/{sub-ubc02_flip-1_mt-on_space-other_MTS_softseg_bin.json => sub-ubc02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-ubc02/anat/{sub-ubc02_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz => sub-ubc02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-ubc02/anat/{sub-ubc02_flip-2_mt-off_space-other_MTS_softseg_bin.json => sub-ubc02_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-ubc02/anat/{sub-ubc02_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz => sub-ubc02_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-ubc02/anat/{sub-ubc02_space-other_T1w_softseg_bin.json => sub-ubc02_space-other_T1w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-ubc02/anat/{sub-ubc02_space-other_T1w_softseg_bin.nii.gz => sub-ubc02_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-ubc02/anat/{sub-ubc02_space-other_T2star_softseg_bin.json => sub-ubc02_space-other_T2star_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-ubc02/anat/{sub-ubc02_space-other_T2star_softseg_bin.nii.gz => sub-ubc02_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-ubc02/anat/{sub-ubc02_space-other_T2w_softseg_bin.json => sub-ubc02_space-other_T2w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-ubc02/anat/{sub-ubc02_space-other_T2w_softseg_bin.nii.gz => sub-ubc02_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-ubc02/dwi/{sub-ubc02_rec-average_dwi_softseg_bin.json => sub-ubc02_rec-average_dwi_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-ubc02/dwi/{sub-ubc02_rec-average_dwi_softseg_bin.nii.gz => sub-ubc02_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-ubc03/anat/{sub-ubc03_flip-1_mt-on_space-other_MTS_softseg_bin.json => sub-ubc03_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-ubc03/anat/{sub-ubc03_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz => sub-ubc03_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-ubc03/anat/{sub-ubc03_flip-2_mt-off_space-other_MTS_softseg_bin.json => sub-ubc03_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-ubc03/anat/{sub-ubc03_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz => sub-ubc03_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-ubc03/anat/{sub-ubc03_space-other_T1w_softseg_bin.json => sub-ubc03_space-other_T1w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-ubc03/anat/{sub-ubc03_space-other_T1w_softseg_bin.nii.gz => sub-ubc03_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-ubc03/anat/{sub-ubc03_space-other_T2star_softseg_bin.json => sub-ubc03_space-other_T2star_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-ubc03/anat/{sub-ubc03_space-other_T2star_softseg_bin.nii.gz => sub-ubc03_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-ubc03/anat/{sub-ubc03_space-other_T2w_softseg_bin.json => sub-ubc03_space-other_T2w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-ubc03/anat/{sub-ubc03_space-other_T2w_softseg_bin.nii.gz => sub-ubc03_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-ubc03/dwi/{sub-ubc03_rec-average_dwi_softseg_bin.json => sub-ubc03_rec-average_dwi_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-ubc03/dwi/{sub-ubc03_rec-average_dwi_softseg_bin.nii.gz => sub-ubc03_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-ubc04/anat/{sub-ubc04_flip-1_mt-on_space-other_MTS_softseg_bin.json => sub-ubc04_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-ubc04/anat/{sub-ubc04_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz => sub-ubc04_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-ubc04/anat/{sub-ubc04_flip-2_mt-off_space-other_MTS_softseg_bin.json => sub-ubc04_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-ubc04/anat/{sub-ubc04_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz => sub-ubc04_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-ubc04/anat/{sub-ubc04_space-other_T1w_softseg_bin.json => sub-ubc04_space-other_T1w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-ubc04/anat/{sub-ubc04_space-other_T1w_softseg_bin.nii.gz => sub-ubc04_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-ubc04/anat/{sub-ubc04_space-other_T2star_softseg_bin.json => sub-ubc04_space-other_T2star_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-ubc04/anat/{sub-ubc04_space-other_T2star_softseg_bin.nii.gz => sub-ubc04_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-ubc04/anat/{sub-ubc04_space-other_T2w_softseg_bin.json => sub-ubc04_space-other_T2w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-ubc04/anat/{sub-ubc04_space-other_T2w_softseg_bin.nii.gz => sub-ubc04_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-ubc04/dwi/{sub-ubc04_rec-average_dwi_softseg_bin.json => sub-ubc04_rec-average_dwi_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-ubc04/dwi/{sub-ubc04_rec-average_dwi_softseg_bin.nii.gz => sub-ubc04_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-ubc05/anat/{sub-ubc05_flip-1_mt-on_space-other_MTS_softseg_bin.json => sub-ubc05_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-ubc05/anat/{sub-ubc05_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz => sub-ubc05_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-ubc05/anat/{sub-ubc05_flip-2_mt-off_space-other_MTS_softseg_bin.json => sub-ubc05_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-ubc05/anat/{sub-ubc05_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz => sub-ubc05_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-ubc05/anat/{sub-ubc05_space-other_T1w_softseg_bin.json => sub-ubc05_space-other_T1w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-ubc05/anat/{sub-ubc05_space-other_T1w_softseg_bin.nii.gz => sub-ubc05_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-ubc05/anat/{sub-ubc05_space-other_T2star_softseg_bin.json => sub-ubc05_space-other_T2star_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-ubc05/anat/{sub-ubc05_space-other_T2star_softseg_bin.nii.gz => sub-ubc05_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-ubc05/anat/{sub-ubc05_space-other_T2w_softseg_bin.json => sub-ubc05_space-other_T2w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-ubc05/anat/{sub-ubc05_space-other_T2w_softseg_bin.nii.gz => sub-ubc05_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-ubc05/dwi/{sub-ubc05_rec-average_dwi_softseg_bin.json => sub-ubc05_rec-average_dwi_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-ubc05/dwi/{sub-ubc05_rec-average_dwi_softseg_bin.nii.gz => sub-ubc05_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-ubc06/anat/{sub-ubc06_flip-1_mt-on_space-other_MTS_softseg_bin.json => sub-ubc06_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-ubc06/anat/{sub-ubc06_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz => sub-ubc06_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-ubc06/anat/{sub-ubc06_flip-2_mt-off_space-other_MTS_softseg_bin.json => sub-ubc06_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-ubc06/anat/{sub-ubc06_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz => sub-ubc06_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-ubc06/anat/{sub-ubc06_space-other_T1w_softseg_bin.json => sub-ubc06_space-other_T1w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-ubc06/anat/{sub-ubc06_space-other_T1w_softseg_bin.nii.gz => sub-ubc06_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-ubc06/anat/{sub-ubc06_space-other_T2star_softseg_bin.json => sub-ubc06_space-other_T2star_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-ubc06/anat/{sub-ubc06_space-other_T2star_softseg_bin.nii.gz => sub-ubc06_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-ubc06/anat/{sub-ubc06_space-other_T2w_softseg_bin.json => sub-ubc06_space-other_T2w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-ubc06/anat/{sub-ubc06_space-other_T2w_softseg_bin.nii.gz => sub-ubc06_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-ubc06/dwi/{sub-ubc06_rec-average_dwi_softseg_bin.json => sub-ubc06_rec-average_dwi_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-ubc06/dwi/{sub-ubc06_rec-average_dwi_softseg_bin.nii.gz => sub-ubc06_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-ucl01/anat/{sub-ucl01_flip-1_mt-on_space-other_MTS_softseg_bin.json => sub-ucl01_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-ucl01/anat/{sub-ucl01_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz => sub-ucl01_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-ucl01/anat/{sub-ucl01_flip-2_mt-off_space-other_MTS_softseg_bin.json => sub-ucl01_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-ucl01/anat/{sub-ucl01_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz => sub-ucl01_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-ucl01/anat/{sub-ucl01_space-other_T1w_softseg_bin.json => sub-ucl01_space-other_T1w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-ucl01/anat/{sub-ucl01_space-other_T1w_softseg_bin.nii.gz => sub-ucl01_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-ucl01/anat/{sub-ucl01_space-other_T2star_softseg_bin.json => sub-ucl01_space-other_T2star_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-ucl01/anat/{sub-ucl01_space-other_T2star_softseg_bin.nii.gz => sub-ucl01_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-ucl01/anat/{sub-ucl01_space-other_T2w_softseg_bin.json => sub-ucl01_space-other_T2w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-ucl01/anat/{sub-ucl01_space-other_T2w_softseg_bin.nii.gz => sub-ucl01_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-ucl01/dwi/{sub-ucl01_rec-average_dwi_softseg_bin.json => sub-ucl01_rec-average_dwi_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-ucl01/dwi/{sub-ucl01_rec-average_dwi_softseg_bin.nii.gz => sub-ucl01_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-ucl02/anat/{sub-ucl02_flip-1_mt-on_space-other_MTS_softseg_bin.json => sub-ucl02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-ucl02/anat/{sub-ucl02_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz => sub-ucl02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-ucl02/anat/{sub-ucl02_flip-2_mt-off_space-other_MTS_softseg_bin.json => sub-ucl02_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-ucl02/anat/{sub-ucl02_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz => sub-ucl02_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-ucl02/anat/{sub-ucl02_space-other_T1w_softseg_bin.json => sub-ucl02_space-other_T1w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-ucl02/anat/{sub-ucl02_space-other_T1w_softseg_bin.nii.gz => sub-ucl02_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-ucl02/anat/{sub-ucl02_space-other_T2star_softseg_bin.json => sub-ucl02_space-other_T2star_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-ucl02/anat/{sub-ucl02_space-other_T2star_softseg_bin.nii.gz => sub-ucl02_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-ucl02/anat/{sub-ucl02_space-other_T2w_softseg_bin.json => sub-ucl02_space-other_T2w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-ucl02/anat/{sub-ucl02_space-other_T2w_softseg_bin.nii.gz => sub-ucl02_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-ucl02/dwi/{sub-ucl02_rec-average_dwi_softseg_bin.json => sub-ucl02_rec-average_dwi_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-ucl02/dwi/{sub-ucl02_rec-average_dwi_softseg_bin.nii.gz => sub-ucl02_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-ucl03/anat/{sub-ucl03_flip-1_mt-on_space-other_MTS_softseg_bin.json => sub-ucl03_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-ucl03/anat/{sub-ucl03_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz => sub-ucl03_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-ucl03/anat/{sub-ucl03_flip-2_mt-off_space-other_MTS_softseg_bin.json => sub-ucl03_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-ucl03/anat/{sub-ucl03_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz => sub-ucl03_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-ucl03/anat/{sub-ucl03_space-other_T1w_softseg_bin.json => sub-ucl03_space-other_T1w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-ucl03/anat/{sub-ucl03_space-other_T1w_softseg_bin.nii.gz => sub-ucl03_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-ucl03/anat/{sub-ucl03_space-other_T2star_softseg_bin.json => sub-ucl03_space-other_T2star_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-ucl03/anat/{sub-ucl03_space-other_T2star_softseg_bin.nii.gz => sub-ucl03_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-ucl03/anat/{sub-ucl03_space-other_T2w_softseg_bin.json => sub-ucl03_space-other_T2w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-ucl03/anat/{sub-ucl03_space-other_T2w_softseg_bin.nii.gz => sub-ucl03_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-ucl03/dwi/{sub-ucl03_rec-average_dwi_softseg_bin.json => sub-ucl03_rec-average_dwi_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-ucl03/dwi/{sub-ucl03_rec-average_dwi_softseg_bin.nii.gz => sub-ucl03_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-ucl04/anat/{sub-ucl04_flip-1_mt-on_space-other_MTS_softseg_bin.json => sub-ucl04_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-ucl04/anat/{sub-ucl04_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz => sub-ucl04_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-ucl04/anat/{sub-ucl04_flip-2_mt-off_space-other_MTS_softseg_bin.json => sub-ucl04_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-ucl04/anat/{sub-ucl04_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz => sub-ucl04_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-ucl04/anat/{sub-ucl04_space-other_T1w_softseg_bin.json => sub-ucl04_space-other_T1w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-ucl04/anat/{sub-ucl04_space-other_T1w_softseg_bin.nii.gz => sub-ucl04_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-ucl04/anat/{sub-ucl04_space-other_T2star_softseg_bin.json => sub-ucl04_space-other_T2star_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-ucl04/anat/{sub-ucl04_space-other_T2star_softseg_bin.nii.gz => sub-ucl04_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-ucl04/anat/{sub-ucl04_space-other_T2w_softseg_bin.json => sub-ucl04_space-other_T2w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-ucl04/anat/{sub-ucl04_space-other_T2w_softseg_bin.nii.gz => sub-ucl04_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-ucl04/dwi/{sub-ucl04_rec-average_dwi_softseg_bin.json => sub-ucl04_rec-average_dwi_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-ucl04/dwi/{sub-ucl04_rec-average_dwi_softseg_bin.nii.gz => sub-ucl04_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-ucl05/anat/{sub-ucl05_flip-1_mt-on_space-other_MTS_softseg_bin.json => sub-ucl05_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-ucl05/anat/{sub-ucl05_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz => sub-ucl05_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-ucl05/anat/{sub-ucl05_flip-2_mt-off_space-other_MTS_softseg_bin.json => sub-ucl05_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-ucl05/anat/{sub-ucl05_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz => sub-ucl05_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-ucl05/anat/{sub-ucl05_space-other_T1w_softseg_bin.json => sub-ucl05_space-other_T1w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-ucl05/anat/{sub-ucl05_space-other_T1w_softseg_bin.nii.gz => sub-ucl05_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-ucl05/anat/{sub-ucl05_space-other_T2star_softseg_bin.json => sub-ucl05_space-other_T2star_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-ucl05/anat/{sub-ucl05_space-other_T2star_softseg_bin.nii.gz => sub-ucl05_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-ucl05/anat/{sub-ucl05_space-other_T2w_softseg_bin.json => sub-ucl05_space-other_T2w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-ucl05/anat/{sub-ucl05_space-other_T2w_softseg_bin.nii.gz => sub-ucl05_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-ucl05/dwi/{sub-ucl05_rec-average_dwi_softseg_bin.json => sub-ucl05_rec-average_dwi_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-ucl05/dwi/{sub-ucl05_rec-average_dwi_softseg_bin.nii.gz => sub-ucl05_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-ucl06/anat/{sub-ucl06_flip-1_mt-on_space-other_MTS_softseg_bin.json => sub-ucl06_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-ucl06/anat/{sub-ucl06_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz => sub-ucl06_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-ucl06/anat/{sub-ucl06_flip-2_mt-off_space-other_MTS_softseg_bin.json => sub-ucl06_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-ucl06/anat/{sub-ucl06_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz => sub-ucl06_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-ucl06/anat/{sub-ucl06_space-other_T1w_softseg_bin.json => sub-ucl06_space-other_T1w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-ucl06/anat/{sub-ucl06_space-other_T1w_softseg_bin.nii.gz => sub-ucl06_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-ucl06/anat/{sub-ucl06_space-other_T2star_softseg_bin.json => sub-ucl06_space-other_T2star_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-ucl06/anat/{sub-ucl06_space-other_T2star_softseg_bin.nii.gz => sub-ucl06_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-ucl06/anat/{sub-ucl06_space-other_T2w_softseg_bin.json => sub-ucl06_space-other_T2w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-ucl06/anat/{sub-ucl06_space-other_T2w_softseg_bin.nii.gz => sub-ucl06_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-ucl06/dwi/{sub-ucl06_rec-average_dwi_softseg_bin.json => sub-ucl06_rec-average_dwi_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-ucl06/dwi/{sub-ucl06_rec-average_dwi_softseg_bin.nii.gz => sub-ucl06_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-unf01/anat/{sub-unf01_flip-1_mt-on_space-other_MTS_softseg_bin.json => sub-unf01_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-unf01/anat/{sub-unf01_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz => sub-unf01_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-unf01/anat/{sub-unf01_flip-2_mt-off_space-other_MTS_softseg_bin.json => sub-unf01_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-unf01/anat/{sub-unf01_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz => sub-unf01_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-unf01/anat/{sub-unf01_space-other_T1w_softseg_bin.json => sub-unf01_space-other_T1w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-unf01/anat/{sub-unf01_space-other_T1w_softseg_bin.nii.gz => sub-unf01_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-unf01/anat/{sub-unf01_space-other_T2star_softseg_bin.json => sub-unf01_space-other_T2star_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-unf01/anat/{sub-unf01_space-other_T2star_softseg_bin.nii.gz => sub-unf01_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-unf01/anat/{sub-unf01_space-other_T2w_softseg_bin.json => sub-unf01_space-other_T2w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-unf01/anat/{sub-unf01_space-other_T2w_softseg_bin.nii.gz => sub-unf01_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-unf01/dwi/{sub-unf01_rec-average_dwi_softseg_bin.json => sub-unf01_rec-average_dwi_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-unf01/dwi/{sub-unf01_rec-average_dwi_softseg_bin.nii.gz => sub-unf01_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-unf02/anat/{sub-unf02_flip-1_mt-on_space-other_MTS_softseg_bin.json => sub-unf02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-unf02/anat/{sub-unf02_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz => sub-unf02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-unf02/anat/{sub-unf02_flip-2_mt-off_space-other_MTS_softseg_bin.json => sub-unf02_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-unf02/anat/{sub-unf02_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz => sub-unf02_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-unf02/anat/{sub-unf02_space-other_T1w_softseg_bin.json => sub-unf02_space-other_T1w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-unf02/anat/{sub-unf02_space-other_T1w_softseg_bin.nii.gz => sub-unf02_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-unf02/anat/{sub-unf02_space-other_T2star_softseg_bin.json => sub-unf02_space-other_T2star_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-unf02/anat/{sub-unf02_space-other_T2star_softseg_bin.nii.gz => sub-unf02_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-unf02/anat/{sub-unf02_space-other_T2w_softseg_bin.json => sub-unf02_space-other_T2w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-unf02/anat/{sub-unf02_space-other_T2w_softseg_bin.nii.gz => sub-unf02_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-unf02/dwi/{sub-unf02_rec-average_dwi_softseg_bin.json => sub-unf02_rec-average_dwi_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-unf02/dwi/{sub-unf02_rec-average_dwi_softseg_bin.nii.gz => sub-unf02_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-unf03/anat/{sub-unf03_flip-1_mt-on_space-other_MTS_softseg_bin.json => sub-unf03_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-unf03/anat/{sub-unf03_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz => sub-unf03_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-unf03/anat/{sub-unf03_flip-2_mt-off_space-other_MTS_softseg_bin.json => sub-unf03_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-unf03/anat/{sub-unf03_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz => sub-unf03_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-unf03/anat/{sub-unf03_space-other_T1w_softseg_bin.json => sub-unf03_space-other_T1w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-unf03/anat/{sub-unf03_space-other_T1w_softseg_bin.nii.gz => sub-unf03_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-unf03/anat/{sub-unf03_space-other_T2star_softseg_bin.json => sub-unf03_space-other_T2star_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-unf03/anat/{sub-unf03_space-other_T2star_softseg_bin.nii.gz => sub-unf03_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-unf03/anat/{sub-unf03_space-other_T2w_softseg_bin.json => sub-unf03_space-other_T2w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-unf03/anat/{sub-unf03_space-other_T2w_softseg_bin.nii.gz => sub-unf03_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-unf03/dwi/{sub-unf03_rec-average_dwi_softseg_bin.json => sub-unf03_rec-average_dwi_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-unf03/dwi/{sub-unf03_rec-average_dwi_softseg_bin.nii.gz => sub-unf03_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-unf04/anat/{sub-unf04_flip-1_mt-on_space-other_MTS_softseg_bin.json => sub-unf04_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-unf04/anat/{sub-unf04_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz => sub-unf04_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-unf04/anat/{sub-unf04_flip-2_mt-off_space-other_MTS_softseg_bin.json => sub-unf04_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-unf04/anat/{sub-unf04_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz => sub-unf04_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-unf04/anat/{sub-unf04_space-other_T1w_softseg_bin.json => sub-unf04_space-other_T1w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-unf04/anat/{sub-unf04_space-other_T1w_softseg_bin.nii.gz => sub-unf04_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-unf04/anat/{sub-unf04_space-other_T2star_softseg_bin.json => sub-unf04_space-other_T2star_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-unf04/anat/{sub-unf04_space-other_T2star_softseg_bin.nii.gz => sub-unf04_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-unf04/anat/{sub-unf04_space-other_T2w_softseg_bin.json => sub-unf04_space-other_T2w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-unf04/anat/{sub-unf04_space-other_T2w_softseg_bin.nii.gz => sub-unf04_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-unf04/dwi/{sub-unf04_rec-average_dwi_softseg_bin.json => sub-unf04_rec-average_dwi_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-unf04/dwi/{sub-unf04_rec-average_dwi_softseg_bin.nii.gz => sub-unf04_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-unf05/anat/{sub-unf05_flip-1_mt-on_space-other_MTS_softseg_bin.json => sub-unf05_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-unf05/anat/{sub-unf05_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz => sub-unf05_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-unf05/anat/{sub-unf05_flip-2_mt-off_space-other_MTS_softseg_bin.json => sub-unf05_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-unf05/anat/{sub-unf05_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz => sub-unf05_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-unf05/anat/{sub-unf05_space-other_T1w_softseg_bin.json => sub-unf05_space-other_T1w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-unf05/anat/{sub-unf05_space-other_T1w_softseg_bin.nii.gz => sub-unf05_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-unf05/anat/{sub-unf05_space-other_T2star_softseg_bin.json => sub-unf05_space-other_T2star_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-unf05/anat/{sub-unf05_space-other_T2star_softseg_bin.nii.gz => sub-unf05_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-unf05/anat/{sub-unf05_space-other_T2w_softseg_bin.json => sub-unf05_space-other_T2w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-unf05/anat/{sub-unf05_space-other_T2w_softseg_bin.nii.gz => sub-unf05_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-unf05/dwi/{sub-unf05_rec-average_dwi_softseg_bin.json => sub-unf05_rec-average_dwi_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-unf05/dwi/{sub-unf05_rec-average_dwi_softseg_bin.nii.gz => sub-unf05_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-unf06/anat/{sub-unf06_flip-1_mt-on_space-other_MTS_softseg_bin.json => sub-unf06_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-unf06/anat/{sub-unf06_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz => sub-unf06_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-unf06/anat/{sub-unf06_flip-2_mt-off_space-other_MTS_softseg_bin.json => sub-unf06_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-unf06/anat/{sub-unf06_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz => sub-unf06_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-unf06/anat/{sub-unf06_space-other_T1w_softseg_bin.json => sub-unf06_space-other_T1w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-unf06/anat/{sub-unf06_space-other_T1w_softseg_bin.nii.gz => sub-unf06_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-unf06/anat/{sub-unf06_space-other_T2star_softseg_bin.json => sub-unf06_space-other_T2star_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-unf06/anat/{sub-unf06_space-other_T2star_softseg_bin.nii.gz => sub-unf06_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-unf06/anat/{sub-unf06_space-other_T2w_softseg_bin.json => sub-unf06_space-other_T2w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-unf06/anat/{sub-unf06_space-other_T2w_softseg_bin.nii.gz => sub-unf06_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-unf06/dwi/{sub-unf06_rec-average_dwi_softseg_bin.json => sub-unf06_rec-average_dwi_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-unf06/dwi/{sub-unf06_rec-average_dwi_softseg_bin.nii.gz => sub-unf06_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-unf07/anat/{sub-unf07_flip-1_mt-on_space-other_MTS_softseg_bin.json => sub-unf07_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-unf07/anat/{sub-unf07_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz => sub-unf07_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-unf07/anat/{sub-unf07_flip-2_mt-off_space-other_MTS_softseg_bin.json => sub-unf07_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-unf07/anat/{sub-unf07_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz => sub-unf07_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-unf07/anat/{sub-unf07_space-other_T1w_softseg_bin.json => sub-unf07_space-other_T1w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-unf07/anat/{sub-unf07_space-other_T1w_softseg_bin.nii.gz => sub-unf07_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-unf07/anat/{sub-unf07_space-other_T2star_softseg_bin.json => sub-unf07_space-other_T2star_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-unf07/anat/{sub-unf07_space-other_T2star_softseg_bin.nii.gz => sub-unf07_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-unf07/anat/{sub-unf07_space-other_T2w_softseg_bin.json => sub-unf07_space-other_T2w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-unf07/anat/{sub-unf07_space-other_T2w_softseg_bin.nii.gz => sub-unf07_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-unf07/dwi/{sub-unf07_rec-average_dwi_softseg_bin.json => sub-unf07_rec-average_dwi_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-unf07/dwi/{sub-unf07_rec-average_dwi_softseg_bin.nii.gz => sub-unf07_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-vallHebron01/anat/{sub-vallHebron01_flip-1_mt-on_space-other_MTS_softseg_bin.json => sub-vallHebron01_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-vallHebron01/anat/{sub-vallHebron01_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz => sub-vallHebron01_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-vallHebron01/anat/{sub-vallHebron01_flip-2_mt-off_space-other_MTS_softseg_bin.json => sub-vallHebron01_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-vallHebron01/anat/{sub-vallHebron01_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz => sub-vallHebron01_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-vallHebron01/anat/{sub-vallHebron01_space-other_T1w_softseg_bin.json => sub-vallHebron01_space-other_T1w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-vallHebron01/anat/{sub-vallHebron01_space-other_T1w_softseg_bin.nii.gz => sub-vallHebron01_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-vallHebron01/anat/{sub-vallHebron01_space-other_T2star_softseg_bin.json => sub-vallHebron01_space-other_T2star_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-vallHebron01/anat/{sub-vallHebron01_space-other_T2star_softseg_bin.nii.gz => sub-vallHebron01_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-vallHebron01/anat/{sub-vallHebron01_space-other_T2w_softseg_bin.json => sub-vallHebron01_space-other_T2w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-vallHebron01/anat/{sub-vallHebron01_space-other_T2w_softseg_bin.nii.gz => sub-vallHebron01_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-vallHebron01/dwi/{sub-vallHebron01_rec-average_dwi_softseg_bin.json => sub-vallHebron01_rec-average_dwi_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-vallHebron01/dwi/{sub-vallHebron01_rec-average_dwi_softseg_bin.nii.gz => sub-vallHebron01_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-vallHebron02/anat/{sub-vallHebron02_flip-1_mt-on_space-other_MTS_softseg_bin.json => sub-vallHebron02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-vallHebron02/anat/{sub-vallHebron02_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz => sub-vallHebron02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-vallHebron02/anat/{sub-vallHebron02_flip-2_mt-off_space-other_MTS_softseg_bin.json => sub-vallHebron02_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-vallHebron02/anat/{sub-vallHebron02_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz => sub-vallHebron02_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-vallHebron02/anat/{sub-vallHebron02_space-other_T1w_softseg_bin.json => sub-vallHebron02_space-other_T1w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-vallHebron02/anat/{sub-vallHebron02_space-other_T1w_softseg_bin.nii.gz => sub-vallHebron02_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-vallHebron02/anat/{sub-vallHebron02_space-other_T2star_softseg_bin.json => sub-vallHebron02_space-other_T2star_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-vallHebron02/anat/{sub-vallHebron02_space-other_T2star_softseg_bin.nii.gz => sub-vallHebron02_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-vallHebron02/anat/{sub-vallHebron02_space-other_T2w_softseg_bin.json => sub-vallHebron02_space-other_T2w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-vallHebron02/anat/{sub-vallHebron02_space-other_T2w_softseg_bin.nii.gz => sub-vallHebron02_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-vallHebron02/dwi/{sub-vallHebron02_rec-average_dwi_softseg_bin.json => sub-vallHebron02_rec-average_dwi_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-vallHebron02/dwi/{sub-vallHebron02_rec-average_dwi_softseg_bin.nii.gz => sub-vallHebron02_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-vallHebron03/anat/{sub-vallHebron03_flip-1_mt-on_space-other_MTS_softseg_bin.json => sub-vallHebron03_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-vallHebron03/anat/{sub-vallHebron03_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz => sub-vallHebron03_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-vallHebron03/anat/{sub-vallHebron03_flip-2_mt-off_space-other_MTS_softseg_bin.json => sub-vallHebron03_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-vallHebron03/anat/{sub-vallHebron03_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz => sub-vallHebron03_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-vallHebron03/anat/{sub-vallHebron03_space-other_T1w_softseg_bin.json => sub-vallHebron03_space-other_T1w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-vallHebron03/anat/{sub-vallHebron03_space-other_T1w_softseg_bin.nii.gz => sub-vallHebron03_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-vallHebron03/anat/{sub-vallHebron03_space-other_T2star_softseg_bin.json => sub-vallHebron03_space-other_T2star_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-vallHebron03/anat/{sub-vallHebron03_space-other_T2star_softseg_bin.nii.gz => sub-vallHebron03_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-vallHebron03/anat/{sub-vallHebron03_space-other_T2w_softseg_bin.json => sub-vallHebron03_space-other_T2w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-vallHebron03/anat/{sub-vallHebron03_space-other_T2w_softseg_bin.nii.gz => sub-vallHebron03_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-vallHebron03/dwi/{sub-vallHebron03_rec-average_dwi_softseg_bin.json => sub-vallHebron03_rec-average_dwi_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-vallHebron03/dwi/{sub-vallHebron03_rec-average_dwi_softseg_bin.nii.gz => sub-vallHebron03_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-vallHebron04/anat/{sub-vallHebron04_flip-1_mt-on_space-other_MTS_softseg_bin.json => sub-vallHebron04_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-vallHebron04/anat/{sub-vallHebron04_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz => sub-vallHebron04_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-vallHebron04/anat/{sub-vallHebron04_flip-2_mt-off_space-other_MTS_softseg_bin.json => sub-vallHebron04_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-vallHebron04/anat/{sub-vallHebron04_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz => sub-vallHebron04_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-vallHebron04/anat/{sub-vallHebron04_space-other_T1w_softseg_bin.json => sub-vallHebron04_space-other_T1w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-vallHebron04/anat/{sub-vallHebron04_space-other_T1w_softseg_bin.nii.gz => sub-vallHebron04_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-vallHebron04/anat/{sub-vallHebron04_space-other_T2star_softseg_bin.json => sub-vallHebron04_space-other_T2star_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-vallHebron04/anat/{sub-vallHebron04_space-other_T2star_softseg_bin.nii.gz => sub-vallHebron04_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-vallHebron04/anat/{sub-vallHebron04_space-other_T2w_softseg_bin.json => sub-vallHebron04_space-other_T2w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-vallHebron04/anat/{sub-vallHebron04_space-other_T2w_softseg_bin.nii.gz => sub-vallHebron04_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-vallHebron04/dwi/{sub-vallHebron04_rec-average_dwi_softseg_bin.json => sub-vallHebron04_rec-average_dwi_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-vallHebron04/dwi/{sub-vallHebron04_rec-average_dwi_softseg_bin.nii.gz => sub-vallHebron04_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-vallHebron05/anat/{sub-vallHebron05_flip-1_mt-on_space-other_MTS_softseg_bin.json => sub-vallHebron05_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-vallHebron05/anat/{sub-vallHebron05_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz => sub-vallHebron05_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-vallHebron05/anat/{sub-vallHebron05_flip-2_mt-off_space-other_MTS_softseg_bin.json => sub-vallHebron05_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-vallHebron05/anat/{sub-vallHebron05_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz => sub-vallHebron05_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-vallHebron05/anat/{sub-vallHebron05_space-other_T1w_softseg_bin.json => sub-vallHebron05_space-other_T1w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-vallHebron05/anat/{sub-vallHebron05_space-other_T1w_softseg_bin.nii.gz => sub-vallHebron05_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-vallHebron05/anat/{sub-vallHebron05_space-other_T2star_softseg_bin.json => sub-vallHebron05_space-other_T2star_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-vallHebron05/anat/{sub-vallHebron05_space-other_T2star_softseg_bin.nii.gz => sub-vallHebron05_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-vallHebron05/anat/{sub-vallHebron05_space-other_T2w_softseg_bin.json => sub-vallHebron05_space-other_T2w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-vallHebron05/anat/{sub-vallHebron05_space-other_T2w_softseg_bin.nii.gz => sub-vallHebron05_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-vallHebron05/dwi/{sub-vallHebron05_rec-average_dwi_softseg_bin.json => sub-vallHebron05_rec-average_dwi_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-vallHebron05/dwi/{sub-vallHebron05_rec-average_dwi_softseg_bin.nii.gz => sub-vallHebron05_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-vallHebron06/anat/{sub-vallHebron06_flip-1_mt-on_space-other_MTS_softseg_bin.json => sub-vallHebron06_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-vallHebron06/anat/{sub-vallHebron06_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz => sub-vallHebron06_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-vallHebron06/anat/{sub-vallHebron06_flip-2_mt-off_space-other_MTS_softseg_bin.json => sub-vallHebron06_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-vallHebron06/anat/{sub-vallHebron06_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz => sub-vallHebron06_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-vallHebron06/anat/{sub-vallHebron06_space-other_T1w_softseg_bin.json => sub-vallHebron06_space-other_T1w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-vallHebron06/anat/{sub-vallHebron06_space-other_T1w_softseg_bin.nii.gz => sub-vallHebron06_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-vallHebron06/anat/{sub-vallHebron06_space-other_T2star_softseg_bin.json => sub-vallHebron06_space-other_T2star_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-vallHebron06/anat/{sub-vallHebron06_space-other_T2star_softseg_bin.nii.gz => sub-vallHebron06_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-vallHebron06/anat/{sub-vallHebron06_space-other_T2w_softseg_bin.json => sub-vallHebron06_space-other_T2w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-vallHebron06/anat/{sub-vallHebron06_space-other_T2w_softseg_bin.nii.gz => sub-vallHebron06_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-vallHebron06/dwi/{sub-vallHebron06_rec-average_dwi_softseg_bin.json => sub-vallHebron06_rec-average_dwi_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-vallHebron06/dwi/{sub-vallHebron06_rec-average_dwi_softseg_bin.nii.gz => sub-vallHebron06_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-vallHebron07/anat/{sub-vallHebron07_flip-1_mt-on_space-other_MTS_softseg_bin.json => sub-vallHebron07_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-vallHebron07/anat/{sub-vallHebron07_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz => sub-vallHebron07_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-vallHebron07/anat/{sub-vallHebron07_flip-2_mt-off_space-other_MTS_softseg_bin.json => sub-vallHebron07_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-vallHebron07/anat/{sub-vallHebron07_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz => sub-vallHebron07_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-vallHebron07/anat/{sub-vallHebron07_space-other_T1w_softseg_bin.json => sub-vallHebron07_space-other_T1w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-vallHebron07/anat/{sub-vallHebron07_space-other_T1w_softseg_bin.nii.gz => sub-vallHebron07_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-vallHebron07/anat/{sub-vallHebron07_space-other_T2star_softseg_bin.json => sub-vallHebron07_space-other_T2star_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-vallHebron07/anat/{sub-vallHebron07_space-other_T2star_softseg_bin.nii.gz => sub-vallHebron07_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-vallHebron07/anat/{sub-vallHebron07_space-other_T2w_softseg_bin.json => sub-vallHebron07_space-other_T2w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-vallHebron07/anat/{sub-vallHebron07_space-other_T2w_softseg_bin.nii.gz => sub-vallHebron07_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-vallHebron07/dwi/{sub-vallHebron07_rec-average_dwi_softseg_bin.json => sub-vallHebron07_rec-average_dwi_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-vallHebron07/dwi/{sub-vallHebron07_rec-average_dwi_softseg_bin.nii.gz => sub-vallHebron07_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-vuiisAchieva01/anat/{sub-vuiisAchieva01_flip-1_mt-on_space-other_MTS_softseg_bin.json => sub-vuiisAchieva01_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-vuiisAchieva01/anat/{sub-vuiisAchieva01_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz => sub-vuiisAchieva01_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-vuiisAchieva01/anat/{sub-vuiisAchieva01_flip-2_mt-off_space-other_MTS_softseg_bin.json => sub-vuiisAchieva01_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-vuiisAchieva01/anat/{sub-vuiisAchieva01_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz => sub-vuiisAchieva01_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-vuiisAchieva01/anat/{sub-vuiisAchieva01_space-other_T1w_softseg_bin.json => sub-vuiisAchieva01_space-other_T1w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-vuiisAchieva01/anat/{sub-vuiisAchieva01_space-other_T1w_softseg_bin.nii.gz => sub-vuiisAchieva01_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-vuiisAchieva01/anat/{sub-vuiisAchieva01_space-other_T2star_softseg_bin.json => sub-vuiisAchieva01_space-other_T2star_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-vuiisAchieva01/anat/{sub-vuiisAchieva01_space-other_T2star_softseg_bin.nii.gz => sub-vuiisAchieva01_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-vuiisAchieva01/anat/{sub-vuiisAchieva01_space-other_T2w_softseg_bin.json => sub-vuiisAchieva01_space-other_T2w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-vuiisAchieva01/anat/{sub-vuiisAchieva01_space-other_T2w_softseg_bin.nii.gz => sub-vuiisAchieva01_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-vuiisAchieva01/dwi/{sub-vuiisAchieva01_rec-average_dwi_softseg_bin.json => sub-vuiisAchieva01_rec-average_dwi_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-vuiisAchieva01/dwi/{sub-vuiisAchieva01_rec-average_dwi_softseg_bin.nii.gz => sub-vuiisAchieva01_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-vuiisAchieva02/anat/{sub-vuiisAchieva02_flip-1_mt-on_space-other_MTS_softseg_bin.json => sub-vuiisAchieva02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-vuiisAchieva02/anat/{sub-vuiisAchieva02_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz => sub-vuiisAchieva02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-vuiisAchieva02/anat/{sub-vuiisAchieva02_flip-2_mt-off_space-other_MTS_softseg_bin.json => sub-vuiisAchieva02_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-vuiisAchieva02/anat/{sub-vuiisAchieva02_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz => sub-vuiisAchieva02_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-vuiisAchieva02/anat/{sub-vuiisAchieva02_space-other_T1w_softseg_bin.json => sub-vuiisAchieva02_space-other_T1w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-vuiisAchieva02/anat/{sub-vuiisAchieva02_space-other_T1w_softseg_bin.nii.gz => sub-vuiisAchieva02_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-vuiisAchieva02/anat/{sub-vuiisAchieva02_space-other_T2star_softseg_bin.json => sub-vuiisAchieva02_space-other_T2star_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-vuiisAchieva02/anat/{sub-vuiisAchieva02_space-other_T2star_softseg_bin.nii.gz => sub-vuiisAchieva02_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-vuiisAchieva02/anat/{sub-vuiisAchieva02_space-other_T2w_softseg_bin.json => sub-vuiisAchieva02_space-other_T2w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-vuiisAchieva02/anat/{sub-vuiisAchieva02_space-other_T2w_softseg_bin.nii.gz => sub-vuiisAchieva02_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-vuiisAchieva02/dwi/{sub-vuiisAchieva02_rec-average_dwi_softseg_bin.json => sub-vuiisAchieva02_rec-average_dwi_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-vuiisAchieva02/dwi/{sub-vuiisAchieva02_rec-average_dwi_softseg_bin.nii.gz => sub-vuiisAchieva02_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-vuiisAchieva03/anat/{sub-vuiisAchieva03_flip-1_mt-on_space-other_MTS_softseg_bin.json => sub-vuiisAchieva03_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-vuiisAchieva03/anat/{sub-vuiisAchieva03_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz => sub-vuiisAchieva03_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-vuiisAchieva03/anat/{sub-vuiisAchieva03_flip-2_mt-off_space-other_MTS_softseg_bin.json => sub-vuiisAchieva03_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-vuiisAchieva03/anat/{sub-vuiisAchieva03_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz => sub-vuiisAchieva03_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-vuiisAchieva03/anat/{sub-vuiisAchieva03_space-other_T1w_softseg_bin.json => sub-vuiisAchieva03_space-other_T1w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-vuiisAchieva03/anat/{sub-vuiisAchieva03_space-other_T1w_softseg_bin.nii.gz => sub-vuiisAchieva03_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-vuiisAchieva03/anat/{sub-vuiisAchieva03_space-other_T2star_softseg_bin.json => sub-vuiisAchieva03_space-other_T2star_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-vuiisAchieva03/anat/{sub-vuiisAchieva03_space-other_T2star_softseg_bin.nii.gz => sub-vuiisAchieva03_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-vuiisAchieva03/anat/{sub-vuiisAchieva03_space-other_T2w_softseg_bin.json => sub-vuiisAchieva03_space-other_T2w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-vuiisAchieva03/anat/{sub-vuiisAchieva03_space-other_T2w_softseg_bin.nii.gz => sub-vuiisAchieva03_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-vuiisAchieva03/dwi/{sub-vuiisAchieva03_rec-average_dwi_softseg_bin.json => sub-vuiisAchieva03_rec-average_dwi_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-vuiisAchieva03/dwi/{sub-vuiisAchieva03_rec-average_dwi_softseg_bin.nii.gz => sub-vuiisAchieva03_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-vuiisAchieva04/anat/{sub-vuiisAchieva04_flip-1_mt-on_space-other_MTS_softseg_bin.json => sub-vuiisAchieva04_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-vuiisAchieva04/anat/{sub-vuiisAchieva04_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz => sub-vuiisAchieva04_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-vuiisAchieva04/anat/{sub-vuiisAchieva04_flip-2_mt-off_space-other_MTS_softseg_bin.json => sub-vuiisAchieva04_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-vuiisAchieva04/anat/{sub-vuiisAchieva04_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz => sub-vuiisAchieva04_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-vuiisAchieva04/anat/{sub-vuiisAchieva04_space-other_T1w_softseg_bin.json => sub-vuiisAchieva04_space-other_T1w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-vuiisAchieva04/anat/{sub-vuiisAchieva04_space-other_T1w_softseg_bin.nii.gz => sub-vuiisAchieva04_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-vuiisAchieva04/anat/{sub-vuiisAchieva04_space-other_T2star_softseg_bin.json => sub-vuiisAchieva04_space-other_T2star_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-vuiisAchieva04/anat/{sub-vuiisAchieva04_space-other_T2star_softseg_bin.nii.gz => sub-vuiisAchieva04_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-vuiisAchieva04/anat/{sub-vuiisAchieva04_space-other_T2w_softseg_bin.json => sub-vuiisAchieva04_space-other_T2w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-vuiisAchieva04/anat/{sub-vuiisAchieva04_space-other_T2w_softseg_bin.nii.gz => sub-vuiisAchieva04_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-vuiisAchieva04/dwi/{sub-vuiisAchieva04_rec-average_dwi_softseg_bin.json => sub-vuiisAchieva04_rec-average_dwi_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-vuiisAchieva04/dwi/{sub-vuiisAchieva04_rec-average_dwi_softseg_bin.nii.gz => sub-vuiisAchieva04_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-vuiisAchieva05/anat/{sub-vuiisAchieva05_flip-1_mt-on_space-other_MTS_softseg_bin.json => sub-vuiisAchieva05_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-vuiisAchieva05/anat/{sub-vuiisAchieva05_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz => sub-vuiisAchieva05_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-vuiisAchieva05/anat/{sub-vuiisAchieva05_flip-2_mt-off_space-other_MTS_softseg_bin.json => sub-vuiisAchieva05_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-vuiisAchieva05/anat/{sub-vuiisAchieva05_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz => sub-vuiisAchieva05_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-vuiisAchieva05/anat/{sub-vuiisAchieva05_space-other_T1w_softseg_bin.json => sub-vuiisAchieva05_space-other_T1w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-vuiisAchieva05/anat/{sub-vuiisAchieva05_space-other_T1w_softseg_bin.nii.gz => sub-vuiisAchieva05_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-vuiisAchieva05/anat/{sub-vuiisAchieva05_space-other_T2star_softseg_bin.json => sub-vuiisAchieva05_space-other_T2star_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-vuiisAchieva05/anat/{sub-vuiisAchieva05_space-other_T2star_softseg_bin.nii.gz => sub-vuiisAchieva05_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-vuiisAchieva05/anat/{sub-vuiisAchieva05_space-other_T2w_softseg_bin.json => sub-vuiisAchieva05_space-other_T2w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-vuiisAchieva05/anat/{sub-vuiisAchieva05_space-other_T2w_softseg_bin.nii.gz => sub-vuiisAchieva05_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-vuiisAchieva05/dwi/{sub-vuiisAchieva05_rec-average_dwi_softseg_bin.json => sub-vuiisAchieva05_rec-average_dwi_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-vuiisAchieva05/dwi/{sub-vuiisAchieva05_rec-average_dwi_softseg_bin.nii.gz => sub-vuiisAchieva05_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-vuiisAchieva06/anat/{sub-vuiisAchieva06_flip-1_mt-on_space-other_MTS_softseg_bin.json => sub-vuiisAchieva06_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-vuiisAchieva06/anat/{sub-vuiisAchieva06_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz => sub-vuiisAchieva06_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-vuiisAchieva06/anat/{sub-vuiisAchieva06_flip-2_mt-off_space-other_MTS_softseg_bin.json => sub-vuiisAchieva06_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-vuiisAchieva06/anat/{sub-vuiisAchieva06_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz => sub-vuiisAchieva06_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-vuiisAchieva06/anat/{sub-vuiisAchieva06_space-other_T1w_softseg_bin.json => sub-vuiisAchieva06_space-other_T1w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-vuiisAchieva06/anat/{sub-vuiisAchieva06_space-other_T1w_softseg_bin.nii.gz => sub-vuiisAchieva06_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-vuiisAchieva06/anat/{sub-vuiisAchieva06_space-other_T2star_softseg_bin.json => sub-vuiisAchieva06_space-other_T2star_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-vuiisAchieva06/anat/{sub-vuiisAchieva06_space-other_T2star_softseg_bin.nii.gz => sub-vuiisAchieva06_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-vuiisAchieva06/anat/{sub-vuiisAchieva06_space-other_T2w_softseg_bin.json => sub-vuiisAchieva06_space-other_T2w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-vuiisAchieva06/anat/{sub-vuiisAchieva06_space-other_T2w_softseg_bin.nii.gz => sub-vuiisAchieva06_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-vuiisAchieva06/dwi/{sub-vuiisAchieva06_rec-average_dwi_softseg_bin.json => sub-vuiisAchieva06_rec-average_dwi_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-vuiisAchieva06/dwi/{sub-vuiisAchieva06_rec-average_dwi_softseg_bin.nii.gz => sub-vuiisAchieva06_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-vuiisIngenia01/anat/{sub-vuiisIngenia01_flip-1_mt-on_space-other_MTS_softseg_bin.json => sub-vuiisIngenia01_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-vuiisIngenia01/anat/{sub-vuiisIngenia01_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz => sub-vuiisIngenia01_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-vuiisIngenia01/anat/{sub-vuiisIngenia01_flip-2_mt-off_space-other_MTS_softseg_bin.json => sub-vuiisIngenia01_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-vuiisIngenia01/anat/{sub-vuiisIngenia01_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz => sub-vuiisIngenia01_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-vuiisIngenia01/anat/{sub-vuiisIngenia01_space-other_T1w_softseg_bin.json => sub-vuiisIngenia01_space-other_T1w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-vuiisIngenia01/anat/{sub-vuiisIngenia01_space-other_T1w_softseg_bin.nii.gz => sub-vuiisIngenia01_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-vuiisIngenia01/anat/{sub-vuiisIngenia01_space-other_T2star_softseg_bin.json => sub-vuiisIngenia01_space-other_T2star_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-vuiisIngenia01/anat/{sub-vuiisIngenia01_space-other_T2star_softseg_bin.nii.gz => sub-vuiisIngenia01_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-vuiisIngenia01/anat/{sub-vuiisIngenia01_space-other_T2w_softseg_bin.json => sub-vuiisIngenia01_space-other_T2w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-vuiisIngenia01/anat/{sub-vuiisIngenia01_space-other_T2w_softseg_bin.nii.gz => sub-vuiisIngenia01_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-vuiisIngenia01/dwi/{sub-vuiisIngenia01_rec-average_dwi_softseg_bin.json => sub-vuiisIngenia01_rec-average_dwi_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-vuiisIngenia01/dwi/{sub-vuiisIngenia01_rec-average_dwi_softseg_bin.nii.gz => sub-vuiisIngenia01_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-vuiisIngenia02/anat/{sub-vuiisIngenia02_flip-1_mt-on_space-other_MTS_softseg_bin.json => sub-vuiisIngenia02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-vuiisIngenia02/anat/{sub-vuiisIngenia02_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz => sub-vuiisIngenia02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-vuiisIngenia02/anat/{sub-vuiisIngenia02_flip-2_mt-off_space-other_MTS_softseg_bin.json => sub-vuiisIngenia02_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-vuiisIngenia02/anat/{sub-vuiisIngenia02_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz => sub-vuiisIngenia02_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-vuiisIngenia02/anat/{sub-vuiisIngenia02_space-other_T1w_softseg_bin.json => sub-vuiisIngenia02_space-other_T1w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-vuiisIngenia02/anat/{sub-vuiisIngenia02_space-other_T1w_softseg_bin.nii.gz => sub-vuiisIngenia02_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-vuiisIngenia02/anat/{sub-vuiisIngenia02_space-other_T2star_softseg_bin.json => sub-vuiisIngenia02_space-other_T2star_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-vuiisIngenia02/anat/{sub-vuiisIngenia02_space-other_T2star_softseg_bin.nii.gz => sub-vuiisIngenia02_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-vuiisIngenia02/anat/{sub-vuiisIngenia02_space-other_T2w_softseg_bin.json => sub-vuiisIngenia02_space-other_T2w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-vuiisIngenia02/anat/{sub-vuiisIngenia02_space-other_T2w_softseg_bin.nii.gz => sub-vuiisIngenia02_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-vuiisIngenia02/dwi/{sub-vuiisIngenia02_rec-average_dwi_softseg_bin.json => sub-vuiisIngenia02_rec-average_dwi_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-vuiisIngenia02/dwi/{sub-vuiisIngenia02_rec-average_dwi_softseg_bin.nii.gz => sub-vuiisIngenia02_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-vuiisIngenia03/anat/{sub-vuiisIngenia03_flip-1_mt-on_space-other_MTS_softseg_bin.json => sub-vuiisIngenia03_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-vuiisIngenia03/anat/{sub-vuiisIngenia03_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz => sub-vuiisIngenia03_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-vuiisIngenia03/anat/{sub-vuiisIngenia03_flip-2_mt-off_space-other_MTS_softseg_bin.json => sub-vuiisIngenia03_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-vuiisIngenia03/anat/{sub-vuiisIngenia03_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz => sub-vuiisIngenia03_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-vuiisIngenia03/anat/{sub-vuiisIngenia03_space-other_T1w_softseg_bin.json => sub-vuiisIngenia03_space-other_T1w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-vuiisIngenia03/anat/{sub-vuiisIngenia03_space-other_T1w_softseg_bin.nii.gz => sub-vuiisIngenia03_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-vuiisIngenia03/anat/{sub-vuiisIngenia03_space-other_T2star_softseg_bin.json => sub-vuiisIngenia03_space-other_T2star_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-vuiisIngenia03/anat/{sub-vuiisIngenia03_space-other_T2star_softseg_bin.nii.gz => sub-vuiisIngenia03_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-vuiisIngenia03/anat/{sub-vuiisIngenia03_space-other_T2w_softseg_bin.json => sub-vuiisIngenia03_space-other_T2w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-vuiisIngenia03/anat/{sub-vuiisIngenia03_space-other_T2w_softseg_bin.nii.gz => sub-vuiisIngenia03_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-vuiisIngenia03/dwi/{sub-vuiisIngenia03_rec-average_dwi_softseg_bin.json => sub-vuiisIngenia03_rec-average_dwi_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-vuiisIngenia03/dwi/{sub-vuiisIngenia03_rec-average_dwi_softseg_bin.nii.gz => sub-vuiisIngenia03_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-vuiisIngenia04/anat/{sub-vuiisIngenia04_flip-1_mt-on_space-other_MTS_softseg_bin.json => sub-vuiisIngenia04_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-vuiisIngenia04/anat/{sub-vuiisIngenia04_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz => sub-vuiisIngenia04_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-vuiisIngenia04/anat/{sub-vuiisIngenia04_flip-2_mt-off_space-other_MTS_softseg_bin.json => sub-vuiisIngenia04_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-vuiisIngenia04/anat/{sub-vuiisIngenia04_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz => sub-vuiisIngenia04_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-vuiisIngenia04/anat/{sub-vuiisIngenia04_space-other_T1w_softseg_bin.json => sub-vuiisIngenia04_space-other_T1w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-vuiisIngenia04/anat/{sub-vuiisIngenia04_space-other_T1w_softseg_bin.nii.gz => sub-vuiisIngenia04_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-vuiisIngenia04/anat/{sub-vuiisIngenia04_space-other_T2star_softseg_bin.json => sub-vuiisIngenia04_space-other_T2star_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-vuiisIngenia04/anat/{sub-vuiisIngenia04_space-other_T2star_softseg_bin.nii.gz => sub-vuiisIngenia04_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-vuiisIngenia04/anat/{sub-vuiisIngenia04_space-other_T2w_softseg_bin.json => sub-vuiisIngenia04_space-other_T2w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-vuiisIngenia04/anat/{sub-vuiisIngenia04_space-other_T2w_softseg_bin.nii.gz => sub-vuiisIngenia04_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-vuiisIngenia04/dwi/{sub-vuiisIngenia04_rec-average_dwi_softseg_bin.json => sub-vuiisIngenia04_rec-average_dwi_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-vuiisIngenia04/dwi/{sub-vuiisIngenia04_rec-average_dwi_softseg_bin.nii.gz => sub-vuiisIngenia04_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-vuiisIngenia05/anat/{sub-vuiisIngenia05_flip-1_mt-on_space-other_MTS_softseg_bin.json => sub-vuiisIngenia05_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-vuiisIngenia05/anat/{sub-vuiisIngenia05_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz => sub-vuiisIngenia05_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-vuiisIngenia05/anat/{sub-vuiisIngenia05_flip-2_mt-off_space-other_MTS_softseg_bin.json => sub-vuiisIngenia05_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-vuiisIngenia05/anat/{sub-vuiisIngenia05_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz => sub-vuiisIngenia05_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-vuiisIngenia05/anat/{sub-vuiisIngenia05_space-other_T1w_softseg_bin.json => sub-vuiisIngenia05_space-other_T1w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-vuiisIngenia05/anat/{sub-vuiisIngenia05_space-other_T1w_softseg_bin.nii.gz => sub-vuiisIngenia05_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-vuiisIngenia05/anat/{sub-vuiisIngenia05_space-other_T2star_softseg_bin.json => sub-vuiisIngenia05_space-other_T2star_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-vuiisIngenia05/anat/{sub-vuiisIngenia05_space-other_T2star_softseg_bin.nii.gz => sub-vuiisIngenia05_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-vuiisIngenia05/anat/{sub-vuiisIngenia05_space-other_T2w_softseg_bin.json => sub-vuiisIngenia05_space-other_T2w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-vuiisIngenia05/anat/{sub-vuiisIngenia05_space-other_T2w_softseg_bin.nii.gz => sub-vuiisIngenia05_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-vuiisIngenia05/dwi/{sub-vuiisIngenia05_rec-average_dwi_softseg_bin.json => sub-vuiisIngenia05_rec-average_dwi_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-vuiisIngenia05/dwi/{sub-vuiisIngenia05_rec-average_dwi_softseg_bin.nii.gz => sub-vuiisIngenia05_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-vuiisIngenia06/anat/{sub-vuiisIngenia06_flip-1_mt-on_space-other_MTS_softseg_bin.json => sub-vuiisIngenia06_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-vuiisIngenia06/anat/{sub-vuiisIngenia06_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz => sub-vuiisIngenia06_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-vuiisIngenia06/anat/{sub-vuiisIngenia06_flip-2_mt-off_space-other_MTS_softseg_bin.json => sub-vuiisIngenia06_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-vuiisIngenia06/anat/{sub-vuiisIngenia06_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz => sub-vuiisIngenia06_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-vuiisIngenia06/anat/{sub-vuiisIngenia06_space-other_T1w_softseg_bin.json => sub-vuiisIngenia06_space-other_T1w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-vuiisIngenia06/anat/{sub-vuiisIngenia06_space-other_T1w_softseg_bin.nii.gz => sub-vuiisIngenia06_space-other_T1w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-vuiisIngenia06/anat/{sub-vuiisIngenia06_space-other_T2star_softseg_bin.json => sub-vuiisIngenia06_space-other_T2star_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-vuiisIngenia06/anat/{sub-vuiisIngenia06_space-other_T2star_softseg_bin.nii.gz => sub-vuiisIngenia06_space-other_T2star_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-vuiisIngenia06/anat/{sub-vuiisIngenia06_space-other_T2w_softseg_bin.json => sub-vuiisIngenia06_space-other_T2w_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-vuiisIngenia06/anat/{sub-vuiisIngenia06_space-other_T2w_softseg_bin.nii.gz => sub-vuiisIngenia06_space-other_T2w_desc-softseg_label-SC_seg.nii.gz} (100%) rename derivatives/labels_softseg_bin/sub-vuiisIngenia06/dwi/{sub-vuiisIngenia06_rec-average_dwi_softseg_bin.json => sub-vuiisIngenia06_rec-average_dwi_desc-softseg_label-SC_seg.json} (100%) rename derivatives/labels_softseg_bin/sub-vuiisIngenia06/dwi/{sub-vuiisIngenia06_rec-average_dwi_softseg_bin.nii.gz => sub-vuiisIngenia06_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz} (100%) diff --git a/derivatives/labels/sub-amu01/anat/sub-amu01_flip-1_mt-on_space-other_MTS_seg-manual.json b/derivatives/labels/sub-amu01/anat/sub-amu01_flip-1_mt-on_space-other_MTS_label-SC_seg.json similarity index 100% rename from derivatives/labels/sub-amu01/anat/sub-amu01_flip-1_mt-on_space-other_MTS_seg-manual.json rename to derivatives/labels/sub-amu01/anat/sub-amu01_flip-1_mt-on_space-other_MTS_label-SC_seg.json diff --git a/derivatives/labels/sub-amu01/anat/sub-amu01_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz b/derivatives/labels/sub-amu01/anat/sub-amu01_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz similarity index 100% rename from derivatives/labels/sub-amu01/anat/sub-amu01_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz rename to derivatives/labels/sub-amu01/anat/sub-amu01_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz diff --git a/derivatives/labels/sub-amu01/anat/sub-amu01_flip-2_mt-off_space-other_MTS_seg-manual.json b/derivatives/labels/sub-amu01/anat/sub-amu01_flip-2_mt-off_space-other_MTS_label-SC_seg.json similarity index 100% rename from derivatives/labels/sub-amu01/anat/sub-amu01_flip-2_mt-off_space-other_MTS_seg-manual.json rename to derivatives/labels/sub-amu01/anat/sub-amu01_flip-2_mt-off_space-other_MTS_label-SC_seg.json diff --git a/derivatives/labels/sub-amu01/anat/sub-amu01_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz b/derivatives/labels/sub-amu01/anat/sub-amu01_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz similarity index 100% rename from derivatives/labels/sub-amu01/anat/sub-amu01_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz rename to derivatives/labels/sub-amu01/anat/sub-amu01_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz diff --git a/derivatives/labels/sub-amu01/anat/sub-amu01_space-other_T1w_seg-manual.json b/derivatives/labels/sub-amu01/anat/sub-amu01_space-other_T1w_label-SC_seg.json similarity index 100% rename from derivatives/labels/sub-amu01/anat/sub-amu01_space-other_T1w_seg-manual.json rename to derivatives/labels/sub-amu01/anat/sub-amu01_space-other_T1w_label-SC_seg.json diff --git a/derivatives/labels/sub-amu01/anat/sub-amu01_space-other_T1w_seg-manual.nii.gz 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rename from derivatives/labels/sub-beijingGE03/dwi/sub-beijingGE03_rec-average_dwi_seg-manual.json rename to derivatives/labels/sub-beijingGE03/dwi/sub-beijingGE03_rec-average_dwi_label-SC_seg.json diff --git a/derivatives/labels/sub-beijingGE03/dwi/sub-beijingGE03_rec-average_dwi_seg-manual.nii.gz b/derivatives/labels/sub-beijingGE03/dwi/sub-beijingGE03_rec-average_dwi_label-SC_seg.nii.gz similarity index 100% rename from derivatives/labels/sub-beijingGE03/dwi/sub-beijingGE03_rec-average_dwi_seg-manual.nii.gz rename to derivatives/labels/sub-beijingGE03/dwi/sub-beijingGE03_rec-average_dwi_label-SC_seg.nii.gz diff --git a/derivatives/labels/sub-beijingGE04/anat/sub-beijingGE04_space-other_T1w_seg-manual.json b/derivatives/labels/sub-beijingGE04/anat/sub-beijingGE04_space-other_T1w_label-SC_seg.json similarity index 100% rename from derivatives/labels/sub-beijingGE04/anat/sub-beijingGE04_space-other_T1w_seg-manual.json rename to 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a/derivatives/labels/sub-beijingVerio02/anat/sub-beijingVerio02_space-other_T1w_seg-manual.json b/derivatives/labels/sub-beijingVerio02/anat/sub-beijingVerio02_space-other_T1w_label-SC_seg.json similarity index 100% rename from derivatives/labels/sub-beijingVerio02/anat/sub-beijingVerio02_space-other_T1w_seg-manual.json rename to derivatives/labels/sub-beijingVerio02/anat/sub-beijingVerio02_space-other_T1w_label-SC_seg.json diff --git a/derivatives/labels/sub-beijingVerio02/anat/sub-beijingVerio02_space-other_T1w_seg-manual.nii.gz b/derivatives/labels/sub-beijingVerio02/anat/sub-beijingVerio02_space-other_T1w_label-SC_seg.nii.gz similarity index 100% rename from derivatives/labels/sub-beijingVerio02/anat/sub-beijingVerio02_space-other_T1w_seg-manual.nii.gz rename to derivatives/labels/sub-beijingVerio02/anat/sub-beijingVerio02_space-other_T1w_label-SC_seg.nii.gz diff --git a/derivatives/labels/sub-beijingVerio02/anat/sub-beijingVerio02_space-other_T1w_labels-disc-manual.json 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a/derivatives/labels/sub-fslAchieva04/anat/sub-fslAchieva04_space-other_T2star_gmseg-manual.json b/derivatives/labels/sub-fslAchieva04/anat/sub-fslAchieva04_space-other_T2star_gmlabel-SC_seg.json similarity index 100% rename from derivatives/labels/sub-fslAchieva04/anat/sub-fslAchieva04_space-other_T2star_gmseg-manual.json rename to derivatives/labels/sub-fslAchieva04/anat/sub-fslAchieva04_space-other_T2star_gmlabel-SC_seg.json diff --git a/derivatives/labels/sub-fslAchieva04/anat/sub-fslAchieva04_space-other_T2star_gmseg-manual.nii.gz b/derivatives/labels/sub-fslAchieva04/anat/sub-fslAchieva04_space-other_T2star_gmlabel-SC_seg.nii.gz similarity index 100% rename from derivatives/labels/sub-fslAchieva04/anat/sub-fslAchieva04_space-other_T2star_gmseg-manual.nii.gz rename to derivatives/labels/sub-fslAchieva04/anat/sub-fslAchieva04_space-other_T2star_gmlabel-SC_seg.nii.gz diff --git a/derivatives/labels/sub-fslAchieva04/anat/sub-fslAchieva04_space-other_T2star_seg-manual.json 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a/derivatives/labels/sub-fslAchieva06/anat/sub-fslAchieva06_flip-1_mt-on_space-other_MTS_seg-manual.json b/derivatives/labels/sub-fslAchieva06/anat/sub-fslAchieva06_flip-1_mt-on_space-other_MTS_label-SC_seg.json similarity index 100% rename from derivatives/labels/sub-fslAchieva06/anat/sub-fslAchieva06_flip-1_mt-on_space-other_MTS_seg-manual.json rename to derivatives/labels/sub-fslAchieva06/anat/sub-fslAchieva06_flip-1_mt-on_space-other_MTS_label-SC_seg.json diff --git a/derivatives/labels/sub-fslAchieva06/anat/sub-fslAchieva06_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz b/derivatives/labels/sub-fslAchieva06/anat/sub-fslAchieva06_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz similarity index 100% rename from derivatives/labels/sub-fslAchieva06/anat/sub-fslAchieva06_flip-1_mt-on_space-other_MTS_seg-manual.nii.gz rename to derivatives/labels/sub-fslAchieva06/anat/sub-fslAchieva06_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz diff --git a/derivatives/labels/sub-fslAchieva06/anat/sub-fslAchieva06_flip-2_mt-off_space-other_MTS_seg-manual.json b/derivatives/labels/sub-fslAchieva06/anat/sub-fslAchieva06_flip-2_mt-off_space-other_MTS_label-SC_seg.json similarity index 100% rename from derivatives/labels/sub-fslAchieva06/anat/sub-fslAchieva06_flip-2_mt-off_space-other_MTS_seg-manual.json rename to derivatives/labels/sub-fslAchieva06/anat/sub-fslAchieva06_flip-2_mt-off_space-other_MTS_label-SC_seg.json diff --git a/derivatives/labels/sub-fslAchieva06/anat/sub-fslAchieva06_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz b/derivatives/labels/sub-fslAchieva06/anat/sub-fslAchieva06_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz similarity index 100% rename from derivatives/labels/sub-fslAchieva06/anat/sub-fslAchieva06_flip-2_mt-off_space-other_MTS_seg-manual.nii.gz rename to derivatives/labels/sub-fslAchieva06/anat/sub-fslAchieva06_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz diff --git 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--git a/derivatives/labels/sub-oxfordFmrib10/anat/sub-oxfordFmrib10_space-other_T2w_seg-manual.json b/derivatives/labels/sub-oxfordFmrib10/anat/sub-oxfordFmrib10_space-other_T2w_label-SC_seg.json similarity index 100% rename from derivatives/labels/sub-oxfordFmrib10/anat/sub-oxfordFmrib10_space-other_T2w_seg-manual.json rename to derivatives/labels/sub-oxfordFmrib10/anat/sub-oxfordFmrib10_space-other_T2w_label-SC_seg.json diff --git a/derivatives/labels/sub-oxfordFmrib10/anat/sub-oxfordFmrib10_space-other_T2w_seg-manual.nii.gz b/derivatives/labels/sub-oxfordFmrib10/anat/sub-oxfordFmrib10_space-other_T2w_label-SC_seg.nii.gz similarity index 100% rename from derivatives/labels/sub-oxfordFmrib10/anat/sub-oxfordFmrib10_space-other_T2w_seg-manual.nii.gz rename to derivatives/labels/sub-oxfordFmrib10/anat/sub-oxfordFmrib10_space-other_T2w_label-SC_seg.nii.gz diff --git a/derivatives/labels/sub-oxfordFmrib10/anat/sub-oxfordFmrib10_space-other_T2w_labels-disc-manual.json 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diff --git a/derivatives/labels/sub-tokyoIngenia07/anat/sub-tokyoIngenia07_space-other_T2w_seg-manual.nii.gz b/derivatives/labels/sub-tokyoIngenia07/anat/sub-tokyoIngenia07_space-other_T2w_label-SC_seg.nii.gz similarity index 100% rename from derivatives/labels/sub-tokyoIngenia07/anat/sub-tokyoIngenia07_space-other_T2w_seg-manual.nii.gz rename to derivatives/labels/sub-tokyoIngenia07/anat/sub-tokyoIngenia07_space-other_T2w_label-SC_seg.nii.gz diff --git a/derivatives/labels/sub-tokyoIngenia07/anat/sub-tokyoIngenia07_space-other_T2w_labels-disc-manual.json b/derivatives/labels/sub-tokyoIngenia07/anat/sub-tokyoIngenia07_space-other_T2w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-tokyoIngenia07/anat/sub-tokyoIngenia07_space-other_T2w_labels-disc-manual.json rename to derivatives/labels/sub-tokyoIngenia07/anat/sub-tokyoIngenia07_space-other_T2w_label-discs_dlabel.json diff --git 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a/derivatives/labels_softseg/sub-barcelona01/anat/sub-barcelona01_flip-1_mt-on_space-other_MTS_softseg.json b/derivatives/labels_softseg/sub-barcelona01/anat/sub-barcelona01_flip-1_mt-on_space-other_MTS_label-SC_softseg.json similarity index 100% rename from derivatives/labels_softseg/sub-barcelona01/anat/sub-barcelona01_flip-1_mt-on_space-other_MTS_softseg.json rename to derivatives/labels_softseg/sub-barcelona01/anat/sub-barcelona01_flip-1_mt-on_space-other_MTS_label-SC_softseg.json diff --git a/derivatives/labels_softseg/sub-barcelona01/anat/sub-barcelona01_flip-1_mt-on_space-other_MTS_softseg.nii.gz b/derivatives/labels_softseg/sub-barcelona01/anat/sub-barcelona01_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz similarity index 100% rename from derivatives/labels_softseg/sub-barcelona01/anat/sub-barcelona01_flip-1_mt-on_space-other_MTS_softseg.nii.gz rename to derivatives/labels_softseg/sub-barcelona01/anat/sub-barcelona01_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz diff --git a/derivatives/labels_softseg/sub-barcelona01/anat/sub-barcelona01_flip-2_mt-off_space-other_MTS_softseg.json b/derivatives/labels_softseg/sub-barcelona01/anat/sub-barcelona01_flip-2_mt-off_space-other_MTS_label-SC_softseg.json similarity index 100% rename from derivatives/labels_softseg/sub-barcelona01/anat/sub-barcelona01_flip-2_mt-off_space-other_MTS_softseg.json rename to derivatives/labels_softseg/sub-barcelona01/anat/sub-barcelona01_flip-2_mt-off_space-other_MTS_label-SC_softseg.json diff --git a/derivatives/labels_softseg/sub-barcelona01/anat/sub-barcelona01_flip-2_mt-off_space-other_MTS_softseg.nii.gz b/derivatives/labels_softseg/sub-barcelona01/anat/sub-barcelona01_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz similarity index 100% rename from derivatives/labels_softseg/sub-barcelona01/anat/sub-barcelona01_flip-2_mt-off_space-other_MTS_softseg.nii.gz rename to 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to derivatives/labels_softseg/sub-barcelona02/dwi/sub-barcelona02_rec-average_dwi_label-SC_softseg.nii.gz diff --git a/derivatives/labels_softseg/sub-barcelona03/anat/sub-barcelona03_flip-1_mt-on_space-other_MTS_softseg.json b/derivatives/labels_softseg/sub-barcelona03/anat/sub-barcelona03_flip-1_mt-on_space-other_MTS_label-SC_softseg.json similarity index 100% rename from derivatives/labels_softseg/sub-barcelona03/anat/sub-barcelona03_flip-1_mt-on_space-other_MTS_softseg.json rename to derivatives/labels_softseg/sub-barcelona03/anat/sub-barcelona03_flip-1_mt-on_space-other_MTS_label-SC_softseg.json diff --git a/derivatives/labels_softseg/sub-barcelona03/anat/sub-barcelona03_flip-1_mt-on_space-other_MTS_softseg.nii.gz b/derivatives/labels_softseg/sub-barcelona03/anat/sub-barcelona03_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz similarity index 100% rename from derivatives/labels_softseg/sub-barcelona03/anat/sub-barcelona03_flip-1_mt-on_space-other_MTS_softseg.nii.gz rename to 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to derivatives/labels_softseg/sub-barcelona06/dwi/sub-barcelona06_rec-average_dwi_label-SC_softseg.nii.gz diff --git a/derivatives/labels_softseg/sub-beijingGE01/anat/sub-beijingGE01_space-other_T1w_softseg.json b/derivatives/labels_softseg/sub-beijingGE01/anat/sub-beijingGE01_space-other_T1w_label-SC_softseg.json similarity index 100% rename from derivatives/labels_softseg/sub-beijingGE01/anat/sub-beijingGE01_space-other_T1w_softseg.json rename to derivatives/labels_softseg/sub-beijingGE01/anat/sub-beijingGE01_space-other_T1w_label-SC_softseg.json diff --git a/derivatives/labels_softseg/sub-beijingGE01/anat/sub-beijingGE01_space-other_T1w_softseg.nii.gz b/derivatives/labels_softseg/sub-beijingGE01/anat/sub-beijingGE01_space-other_T1w_label-SC_softseg.nii.gz similarity index 100% rename from derivatives/labels_softseg/sub-beijingGE01/anat/sub-beijingGE01_space-other_T1w_softseg.nii.gz rename to derivatives/labels_softseg/sub-beijingGE01/anat/sub-beijingGE01_space-other_T1w_label-SC_softseg.nii.gz diff --git a/derivatives/labels_softseg/sub-beijingGE01/anat/sub-beijingGE01_space-other_T2star_softseg.json b/derivatives/labels_softseg/sub-beijingGE01/anat/sub-beijingGE01_space-other_T2star_label-SC_softseg.json similarity index 100% rename from derivatives/labels_softseg/sub-beijingGE01/anat/sub-beijingGE01_space-other_T2star_softseg.json rename to derivatives/labels_softseg/sub-beijingGE01/anat/sub-beijingGE01_space-other_T2star_label-SC_softseg.json diff --git a/derivatives/labels_softseg/sub-beijingGE01/anat/sub-beijingGE01_space-other_T2star_softseg.nii.gz b/derivatives/labels_softseg/sub-beijingGE01/anat/sub-beijingGE01_space-other_T2star_label-SC_softseg.nii.gz similarity index 100% rename from derivatives/labels_softseg/sub-beijingGE01/anat/sub-beijingGE01_space-other_T2star_softseg.nii.gz rename to derivatives/labels_softseg/sub-beijingGE01/anat/sub-beijingGE01_space-other_T2star_label-SC_softseg.nii.gz diff --git a/derivatives/labels_softseg/sub-beijingGE01/anat/sub-beijingGE01_space-other_T2w_softseg.json b/derivatives/labels_softseg/sub-beijingGE01/anat/sub-beijingGE01_space-other_T2w_label-SC_softseg.json similarity index 100% rename from derivatives/labels_softseg/sub-beijingGE01/anat/sub-beijingGE01_space-other_T2w_softseg.json rename to derivatives/labels_softseg/sub-beijingGE01/anat/sub-beijingGE01_space-other_T2w_label-SC_softseg.json diff --git a/derivatives/labels_softseg/sub-beijingGE01/anat/sub-beijingGE01_space-other_T2w_softseg.nii.gz b/derivatives/labels_softseg/sub-beijingGE01/anat/sub-beijingGE01_space-other_T2w_label-SC_softseg.nii.gz similarity index 100% rename from derivatives/labels_softseg/sub-beijingGE01/anat/sub-beijingGE01_space-other_T2w_softseg.nii.gz rename to derivatives/labels_softseg/sub-beijingGE01/anat/sub-beijingGE01_space-other_T2w_label-SC_softseg.nii.gz diff --git a/derivatives/labels_softseg/sub-beijingGE01/dwi/sub-beijingGE01_rec-average_dwi_softseg.json b/derivatives/labels_softseg/sub-beijingGE01/dwi/sub-beijingGE01_rec-average_dwi_label-SC_softseg.json similarity index 100% rename from derivatives/labels_softseg/sub-beijingGE01/dwi/sub-beijingGE01_rec-average_dwi_softseg.json rename to derivatives/labels_softseg/sub-beijingGE01/dwi/sub-beijingGE01_rec-average_dwi_label-SC_softseg.json diff --git a/derivatives/labels_softseg/sub-beijingGE01/dwi/sub-beijingGE01_rec-average_dwi_softseg.nii.gz b/derivatives/labels_softseg/sub-beijingGE01/dwi/sub-beijingGE01_rec-average_dwi_label-SC_softseg.nii.gz similarity index 100% rename from derivatives/labels_softseg/sub-beijingGE01/dwi/sub-beijingGE01_rec-average_dwi_softseg.nii.gz rename to derivatives/labels_softseg/sub-beijingGE01/dwi/sub-beijingGE01_rec-average_dwi_label-SC_softseg.nii.gz diff --git a/derivatives/labels_softseg/sub-beijingGE02/anat/sub-beijingGE02_space-other_T1w_softseg.json b/derivatives/labels_softseg/sub-beijingGE02/anat/sub-beijingGE02_space-other_T1w_label-SC_softseg.json similarity index 100% rename from derivatives/labels_softseg/sub-beijingGE02/anat/sub-beijingGE02_space-other_T1w_softseg.json rename to derivatives/labels_softseg/sub-beijingGE02/anat/sub-beijingGE02_space-other_T1w_label-SC_softseg.json diff --git a/derivatives/labels_softseg/sub-beijingGE02/anat/sub-beijingGE02_space-other_T1w_softseg.nii.gz b/derivatives/labels_softseg/sub-beijingGE02/anat/sub-beijingGE02_space-other_T1w_label-SC_softseg.nii.gz similarity index 100% rename from derivatives/labels_softseg/sub-beijingGE02/anat/sub-beijingGE02_space-other_T1w_softseg.nii.gz rename to derivatives/labels_softseg/sub-beijingGE02/anat/sub-beijingGE02_space-other_T1w_label-SC_softseg.nii.gz diff --git a/derivatives/labels_softseg/sub-beijingGE02/anat/sub-beijingGE02_space-other_T2star_softseg.json b/derivatives/labels_softseg/sub-beijingGE02/anat/sub-beijingGE02_space-other_T2star_label-SC_softseg.json similarity index 100% rename from derivatives/labels_softseg/sub-beijingGE02/anat/sub-beijingGE02_space-other_T2star_softseg.json rename to derivatives/labels_softseg/sub-beijingGE02/anat/sub-beijingGE02_space-other_T2star_label-SC_softseg.json diff --git a/derivatives/labels_softseg/sub-beijingGE02/anat/sub-beijingGE02_space-other_T2star_softseg.nii.gz b/derivatives/labels_softseg/sub-beijingGE02/anat/sub-beijingGE02_space-other_T2star_label-SC_softseg.nii.gz similarity index 100% rename from derivatives/labels_softseg/sub-beijingGE02/anat/sub-beijingGE02_space-other_T2star_softseg.nii.gz rename to derivatives/labels_softseg/sub-beijingGE02/anat/sub-beijingGE02_space-other_T2star_label-SC_softseg.nii.gz diff --git a/derivatives/labels_softseg/sub-beijingGE02/anat/sub-beijingGE02_space-other_T2w_softseg.json b/derivatives/labels_softseg/sub-beijingGE02/anat/sub-beijingGE02_space-other_T2w_label-SC_softseg.json similarity index 100% rename from derivatives/labels_softseg/sub-beijingGE02/anat/sub-beijingGE02_space-other_T2w_softseg.json rename to derivatives/labels_softseg/sub-beijingGE02/anat/sub-beijingGE02_space-other_T2w_label-SC_softseg.json diff --git a/derivatives/labels_softseg/sub-beijingGE02/anat/sub-beijingGE02_space-other_T2w_softseg.nii.gz b/derivatives/labels_softseg/sub-beijingGE02/anat/sub-beijingGE02_space-other_T2w_label-SC_softseg.nii.gz similarity index 100% rename from derivatives/labels_softseg/sub-beijingGE02/anat/sub-beijingGE02_space-other_T2w_softseg.nii.gz rename to derivatives/labels_softseg/sub-beijingGE02/anat/sub-beijingGE02_space-other_T2w_label-SC_softseg.nii.gz diff --git a/derivatives/labels_softseg/sub-beijingGE02/dwi/sub-beijingGE02_rec-average_dwi_softseg.json b/derivatives/labels_softseg/sub-beijingGE02/dwi/sub-beijingGE02_rec-average_dwi_label-SC_softseg.json similarity index 100% rename from derivatives/labels_softseg/sub-beijingGE02/dwi/sub-beijingGE02_rec-average_dwi_softseg.json rename to derivatives/labels_softseg/sub-beijingGE02/dwi/sub-beijingGE02_rec-average_dwi_label-SC_softseg.json diff --git a/derivatives/labels_softseg/sub-beijingGE02/dwi/sub-beijingGE02_rec-average_dwi_softseg.nii.gz b/derivatives/labels_softseg/sub-beijingGE02/dwi/sub-beijingGE02_rec-average_dwi_label-SC_softseg.nii.gz similarity index 100% rename from derivatives/labels_softseg/sub-beijingGE02/dwi/sub-beijingGE02_rec-average_dwi_softseg.nii.gz rename to derivatives/labels_softseg/sub-beijingGE02/dwi/sub-beijingGE02_rec-average_dwi_label-SC_softseg.nii.gz diff --git a/derivatives/labels_softseg/sub-beijingGE03/anat/sub-beijingGE03_space-other_T1w_softseg.json b/derivatives/labels_softseg/sub-beijingGE03/anat/sub-beijingGE03_space-other_T1w_label-SC_softseg.json similarity index 100% rename from derivatives/labels_softseg/sub-beijingGE03/anat/sub-beijingGE03_space-other_T1w_softseg.json rename to derivatives/labels_softseg/sub-beijingGE03/anat/sub-beijingGE03_space-other_T1w_label-SC_softseg.json diff --git a/derivatives/labels_softseg/sub-beijingGE03/anat/sub-beijingGE03_space-other_T1w_softseg.nii.gz b/derivatives/labels_softseg/sub-beijingGE03/anat/sub-beijingGE03_space-other_T1w_label-SC_softseg.nii.gz similarity index 100% rename from derivatives/labels_softseg/sub-beijingGE03/anat/sub-beijingGE03_space-other_T1w_softseg.nii.gz rename to derivatives/labels_softseg/sub-beijingGE03/anat/sub-beijingGE03_space-other_T1w_label-SC_softseg.nii.gz diff --git a/derivatives/labels_softseg/sub-beijingGE03/anat/sub-beijingGE03_space-other_T2star_softseg.json b/derivatives/labels_softseg/sub-beijingGE03/anat/sub-beijingGE03_space-other_T2star_label-SC_softseg.json similarity index 100% rename from derivatives/labels_softseg/sub-beijingGE03/anat/sub-beijingGE03_space-other_T2star_softseg.json rename to derivatives/labels_softseg/sub-beijingGE03/anat/sub-beijingGE03_space-other_T2star_label-SC_softseg.json diff --git a/derivatives/labels_softseg/sub-beijingGE03/anat/sub-beijingGE03_space-other_T2star_softseg.nii.gz b/derivatives/labels_softseg/sub-beijingGE03/anat/sub-beijingGE03_space-other_T2star_label-SC_softseg.nii.gz similarity index 100% rename from derivatives/labels_softseg/sub-beijingGE03/anat/sub-beijingGE03_space-other_T2star_softseg.nii.gz rename to derivatives/labels_softseg/sub-beijingGE03/anat/sub-beijingGE03_space-other_T2star_label-SC_softseg.nii.gz diff --git a/derivatives/labels_softseg/sub-beijingGE03/anat/sub-beijingGE03_space-other_T2w_softseg.json b/derivatives/labels_softseg/sub-beijingGE03/anat/sub-beijingGE03_space-other_T2w_label-SC_softseg.json similarity index 100% rename from derivatives/labels_softseg/sub-beijingGE03/anat/sub-beijingGE03_space-other_T2w_softseg.json rename to derivatives/labels_softseg/sub-beijingGE03/anat/sub-beijingGE03_space-other_T2w_label-SC_softseg.json diff --git a/derivatives/labels_softseg/sub-beijingGE03/anat/sub-beijingGE03_space-other_T2w_softseg.nii.gz b/derivatives/labels_softseg/sub-beijingGE03/anat/sub-beijingGE03_space-other_T2w_label-SC_softseg.nii.gz similarity index 100% rename from derivatives/labels_softseg/sub-beijingGE03/anat/sub-beijingGE03_space-other_T2w_softseg.nii.gz rename to derivatives/labels_softseg/sub-beijingGE03/anat/sub-beijingGE03_space-other_T2w_label-SC_softseg.nii.gz diff --git a/derivatives/labels_softseg/sub-beijingGE03/dwi/sub-beijingGE03_rec-average_dwi_softseg.json b/derivatives/labels_softseg/sub-beijingGE03/dwi/sub-beijingGE03_rec-average_dwi_label-SC_softseg.json similarity index 100% rename from derivatives/labels_softseg/sub-beijingGE03/dwi/sub-beijingGE03_rec-average_dwi_softseg.json rename to derivatives/labels_softseg/sub-beijingGE03/dwi/sub-beijingGE03_rec-average_dwi_label-SC_softseg.json diff --git a/derivatives/labels_softseg/sub-beijingGE03/dwi/sub-beijingGE03_rec-average_dwi_softseg.nii.gz b/derivatives/labels_softseg/sub-beijingGE03/dwi/sub-beijingGE03_rec-average_dwi_label-SC_softseg.nii.gz similarity index 100% rename from derivatives/labels_softseg/sub-beijingGE03/dwi/sub-beijingGE03_rec-average_dwi_softseg.nii.gz rename to derivatives/labels_softseg/sub-beijingGE03/dwi/sub-beijingGE03_rec-average_dwi_label-SC_softseg.nii.gz diff --git a/derivatives/labels_softseg/sub-beijingGE04/anat/sub-beijingGE04_space-other_T1w_softseg.json b/derivatives/labels_softseg/sub-beijingGE04/anat/sub-beijingGE04_space-other_T1w_label-SC_softseg.json similarity index 100% rename from derivatives/labels_softseg/sub-beijingGE04/anat/sub-beijingGE04_space-other_T1w_softseg.json rename to derivatives/labels_softseg/sub-beijingGE04/anat/sub-beijingGE04_space-other_T1w_label-SC_softseg.json diff --git a/derivatives/labels_softseg/sub-beijingGE04/anat/sub-beijingGE04_space-other_T1w_softseg.nii.gz b/derivatives/labels_softseg/sub-beijingGE04/anat/sub-beijingGE04_space-other_T1w_label-SC_softseg.nii.gz similarity index 100% rename from derivatives/labels_softseg/sub-beijingGE04/anat/sub-beijingGE04_space-other_T1w_softseg.nii.gz rename to 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derivatives/labels_softseg/sub-beijingGE04/anat/sub-beijingGE04_space-other_T2w_label-SC_softseg.nii.gz diff --git a/derivatives/labels_softseg/sub-beijingGE04/dwi/sub-beijingGE04_rec-average_dwi_softseg.json b/derivatives/labels_softseg/sub-beijingGE04/dwi/sub-beijingGE04_rec-average_dwi_label-SC_softseg.json similarity index 100% rename from derivatives/labels_softseg/sub-beijingGE04/dwi/sub-beijingGE04_rec-average_dwi_softseg.json rename to derivatives/labels_softseg/sub-beijingGE04/dwi/sub-beijingGE04_rec-average_dwi_label-SC_softseg.json diff --git a/derivatives/labels_softseg/sub-beijingGE04/dwi/sub-beijingGE04_rec-average_dwi_softseg.nii.gz b/derivatives/labels_softseg/sub-beijingGE04/dwi/sub-beijingGE04_rec-average_dwi_label-SC_softseg.nii.gz similarity index 100% rename from derivatives/labels_softseg/sub-beijingGE04/dwi/sub-beijingGE04_rec-average_dwi_softseg.nii.gz rename to derivatives/labels_softseg/sub-beijingGE04/dwi/sub-beijingGE04_rec-average_dwi_label-SC_softseg.nii.gz diff --git a/derivatives/labels_softseg/sub-beijingPrisma01/anat/sub-beijingPrisma01_flip-1_mt-on_space-other_MTS_softseg.json b/derivatives/labels_softseg/sub-beijingPrisma01/anat/sub-beijingPrisma01_flip-1_mt-on_space-other_MTS_label-SC_softseg.json similarity index 100% rename from derivatives/labels_softseg/sub-beijingPrisma01/anat/sub-beijingPrisma01_flip-1_mt-on_space-other_MTS_softseg.json rename to derivatives/labels_softseg/sub-beijingPrisma01/anat/sub-beijingPrisma01_flip-1_mt-on_space-other_MTS_label-SC_softseg.json diff --git a/derivatives/labels_softseg/sub-beijingPrisma01/anat/sub-beijingPrisma01_flip-1_mt-on_space-other_MTS_softseg.nii.gz b/derivatives/labels_softseg/sub-beijingPrisma01/anat/sub-beijingPrisma01_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz similarity index 100% rename from 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b/derivatives/labels_softseg/sub-beijingPrisma01/anat/sub-beijingPrisma01_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz similarity index 100% rename from derivatives/labels_softseg/sub-beijingPrisma01/anat/sub-beijingPrisma01_flip-2_mt-off_space-other_MTS_softseg.nii.gz rename to derivatives/labels_softseg/sub-beijingPrisma01/anat/sub-beijingPrisma01_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz diff --git a/derivatives/labels_softseg/sub-beijingPrisma01/anat/sub-beijingPrisma01_space-other_T1w_softseg.json b/derivatives/labels_softseg/sub-beijingPrisma01/anat/sub-beijingPrisma01_space-other_T1w_label-SC_softseg.json similarity index 100% rename from derivatives/labels_softseg/sub-beijingPrisma01/anat/sub-beijingPrisma01_space-other_T1w_softseg.json rename to derivatives/labels_softseg/sub-beijingPrisma01/anat/sub-beijingPrisma01_space-other_T1w_label-SC_softseg.json diff --git a/derivatives/labels_softseg/sub-beijingPrisma01/anat/sub-beijingPrisma01_space-other_T1w_softseg.nii.gz b/derivatives/labels_softseg/sub-beijingPrisma01/anat/sub-beijingPrisma01_space-other_T1w_label-SC_softseg.nii.gz similarity index 100% rename from derivatives/labels_softseg/sub-beijingPrisma01/anat/sub-beijingPrisma01_space-other_T1w_softseg.nii.gz rename to derivatives/labels_softseg/sub-beijingPrisma01/anat/sub-beijingPrisma01_space-other_T1w_label-SC_softseg.nii.gz diff --git a/derivatives/labels_softseg/sub-beijingPrisma01/anat/sub-beijingPrisma01_space-other_T2star_softseg.json b/derivatives/labels_softseg/sub-beijingPrisma01/anat/sub-beijingPrisma01_space-other_T2star_label-SC_softseg.json similarity index 100% rename from derivatives/labels_softseg/sub-beijingPrisma01/anat/sub-beijingPrisma01_space-other_T2star_softseg.json rename to derivatives/labels_softseg/sub-beijingPrisma01/anat/sub-beijingPrisma01_space-other_T2star_label-SC_softseg.json diff --git a/derivatives/labels_softseg/sub-beijingPrisma01/anat/sub-beijingPrisma01_space-other_T2star_softseg.nii.gz b/derivatives/labels_softseg/sub-beijingPrisma01/anat/sub-beijingPrisma01_space-other_T2star_label-SC_softseg.nii.gz similarity index 100% rename from derivatives/labels_softseg/sub-beijingPrisma01/anat/sub-beijingPrisma01_space-other_T2star_softseg.nii.gz rename to derivatives/labels_softseg/sub-beijingPrisma01/anat/sub-beijingPrisma01_space-other_T2star_label-SC_softseg.nii.gz diff --git a/derivatives/labels_softseg/sub-beijingPrisma01/anat/sub-beijingPrisma01_space-other_T2w_softseg.json b/derivatives/labels_softseg/sub-beijingPrisma01/anat/sub-beijingPrisma01_space-other_T2w_label-SC_softseg.json similarity index 100% rename from derivatives/labels_softseg/sub-beijingPrisma01/anat/sub-beijingPrisma01_space-other_T2w_softseg.json rename to derivatives/labels_softseg/sub-beijingPrisma01/anat/sub-beijingPrisma01_space-other_T2w_label-SC_softseg.json diff --git a/derivatives/labels_softseg/sub-beijingPrisma01/anat/sub-beijingPrisma01_space-other_T2w_softseg.nii.gz b/derivatives/labels_softseg/sub-beijingPrisma01/anat/sub-beijingPrisma01_space-other_T2w_label-SC_softseg.nii.gz similarity index 100% rename from derivatives/labels_softseg/sub-beijingPrisma01/anat/sub-beijingPrisma01_space-other_T2w_softseg.nii.gz rename to derivatives/labels_softseg/sub-beijingPrisma01/anat/sub-beijingPrisma01_space-other_T2w_label-SC_softseg.nii.gz diff --git a/derivatives/labels_softseg/sub-beijingPrisma01/dwi/sub-beijingPrisma01_rec-average_dwi_softseg.json b/derivatives/labels_softseg/sub-beijingPrisma01/dwi/sub-beijingPrisma01_rec-average_dwi_label-SC_softseg.json similarity index 100% rename from derivatives/labels_softseg/sub-beijingPrisma01/dwi/sub-beijingPrisma01_rec-average_dwi_softseg.json rename to derivatives/labels_softseg/sub-beijingPrisma01/dwi/sub-beijingPrisma01_rec-average_dwi_label-SC_softseg.json diff --git a/derivatives/labels_softseg/sub-beijingPrisma01/dwi/sub-beijingPrisma01_rec-average_dwi_softseg.nii.gz b/derivatives/labels_softseg/sub-beijingPrisma01/dwi/sub-beijingPrisma01_rec-average_dwi_label-SC_softseg.nii.gz similarity index 100% rename from derivatives/labels_softseg/sub-beijingPrisma01/dwi/sub-beijingPrisma01_rec-average_dwi_softseg.nii.gz rename to derivatives/labels_softseg/sub-beijingPrisma01/dwi/sub-beijingPrisma01_rec-average_dwi_label-SC_softseg.nii.gz diff --git a/derivatives/labels_softseg/sub-beijingPrisma02/anat/sub-beijingPrisma02_flip-1_mt-on_space-other_MTS_softseg.json b/derivatives/labels_softseg/sub-beijingPrisma02/anat/sub-beijingPrisma02_flip-1_mt-on_space-other_MTS_label-SC_softseg.json similarity index 100% rename from derivatives/labels_softseg/sub-beijingPrisma02/anat/sub-beijingPrisma02_flip-1_mt-on_space-other_MTS_softseg.json rename to 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derivatives/labels_softseg/sub-beijingPrisma02/anat/sub-beijingPrisma02_flip-2_mt-off_space-other_MTS_softseg.json rename to derivatives/labels_softseg/sub-beijingPrisma02/anat/sub-beijingPrisma02_flip-2_mt-off_space-other_MTS_label-SC_softseg.json diff --git a/derivatives/labels_softseg/sub-beijingPrisma02/anat/sub-beijingPrisma02_flip-2_mt-off_space-other_MTS_softseg.nii.gz b/derivatives/labels_softseg/sub-beijingPrisma02/anat/sub-beijingPrisma02_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz similarity index 100% rename from derivatives/labels_softseg/sub-beijingPrisma02/anat/sub-beijingPrisma02_flip-2_mt-off_space-other_MTS_softseg.nii.gz rename to derivatives/labels_softseg/sub-beijingPrisma02/anat/sub-beijingPrisma02_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz diff --git a/derivatives/labels_softseg/sub-beijingPrisma02/anat/sub-beijingPrisma02_space-other_T1w_softseg.json b/derivatives/labels_softseg/sub-beijingPrisma02/anat/sub-beijingPrisma02_space-other_T1w_label-SC_softseg.json similarity index 100% rename from derivatives/labels_softseg/sub-beijingPrisma02/anat/sub-beijingPrisma02_space-other_T1w_softseg.json rename to derivatives/labels_softseg/sub-beijingPrisma02/anat/sub-beijingPrisma02_space-other_T1w_label-SC_softseg.json diff --git a/derivatives/labels_softseg/sub-beijingPrisma02/anat/sub-beijingPrisma02_space-other_T1w_softseg.nii.gz b/derivatives/labels_softseg/sub-beijingPrisma02/anat/sub-beijingPrisma02_space-other_T1w_label-SC_softseg.nii.gz similarity index 100% rename from derivatives/labels_softseg/sub-beijingPrisma02/anat/sub-beijingPrisma02_space-other_T1w_softseg.nii.gz rename to derivatives/labels_softseg/sub-beijingPrisma02/anat/sub-beijingPrisma02_space-other_T1w_label-SC_softseg.nii.gz diff --git a/derivatives/labels_softseg/sub-beijingPrisma02/anat/sub-beijingPrisma02_space-other_T2star_softseg.json b/derivatives/labels_softseg/sub-beijingPrisma02/anat/sub-beijingPrisma02_space-other_T2star_label-SC_softseg.json similarity index 100% rename from derivatives/labels_softseg/sub-beijingPrisma02/anat/sub-beijingPrisma02_space-other_T2star_softseg.json rename to derivatives/labels_softseg/sub-beijingPrisma02/anat/sub-beijingPrisma02_space-other_T2star_label-SC_softseg.json diff --git a/derivatives/labels_softseg/sub-beijingPrisma02/anat/sub-beijingPrisma02_space-other_T2star_softseg.nii.gz b/derivatives/labels_softseg/sub-beijingPrisma02/anat/sub-beijingPrisma02_space-other_T2star_label-SC_softseg.nii.gz similarity index 100% rename from derivatives/labels_softseg/sub-beijingPrisma02/anat/sub-beijingPrisma02_space-other_T2star_softseg.nii.gz rename to derivatives/labels_softseg/sub-beijingPrisma02/anat/sub-beijingPrisma02_space-other_T2star_label-SC_softseg.nii.gz diff --git a/derivatives/labels_softseg/sub-beijingPrisma02/anat/sub-beijingPrisma02_space-other_T2w_softseg.json b/derivatives/labels_softseg/sub-beijingPrisma02/anat/sub-beijingPrisma02_space-other_T2w_label-SC_softseg.json similarity index 100% rename from derivatives/labels_softseg/sub-beijingPrisma02/anat/sub-beijingPrisma02_space-other_T2w_softseg.json rename to derivatives/labels_softseg/sub-beijingPrisma02/anat/sub-beijingPrisma02_space-other_T2w_label-SC_softseg.json diff --git a/derivatives/labels_softseg/sub-beijingPrisma02/anat/sub-beijingPrisma02_space-other_T2w_softseg.nii.gz b/derivatives/labels_softseg/sub-beijingPrisma02/anat/sub-beijingPrisma02_space-other_T2w_label-SC_softseg.nii.gz similarity index 100% rename from derivatives/labels_softseg/sub-beijingPrisma02/anat/sub-beijingPrisma02_space-other_T2w_softseg.nii.gz rename to derivatives/labels_softseg/sub-beijingPrisma02/anat/sub-beijingPrisma02_space-other_T2w_label-SC_softseg.nii.gz diff --git a/derivatives/labels_softseg/sub-beijingPrisma02/dwi/sub-beijingPrisma02_rec-average_dwi_softseg.json b/derivatives/labels_softseg/sub-beijingPrisma02/dwi/sub-beijingPrisma02_rec-average_dwi_label-SC_softseg.json similarity index 100% rename from derivatives/labels_softseg/sub-beijingPrisma02/dwi/sub-beijingPrisma02_rec-average_dwi_softseg.json rename to derivatives/labels_softseg/sub-beijingPrisma02/dwi/sub-beijingPrisma02_rec-average_dwi_label-SC_softseg.json diff --git a/derivatives/labels_softseg/sub-beijingPrisma02/dwi/sub-beijingPrisma02_rec-average_dwi_softseg.nii.gz b/derivatives/labels_softseg/sub-beijingPrisma02/dwi/sub-beijingPrisma02_rec-average_dwi_label-SC_softseg.nii.gz similarity index 100% rename from derivatives/labels_softseg/sub-beijingPrisma02/dwi/sub-beijingPrisma02_rec-average_dwi_softseg.nii.gz rename to derivatives/labels_softseg/sub-beijingPrisma02/dwi/sub-beijingPrisma02_rec-average_dwi_label-SC_softseg.nii.gz diff --git a/derivatives/labels_softseg/sub-beijingPrisma03/anat/sub-beijingPrisma03_flip-1_mt-on_space-other_MTS_softseg.json 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a/derivatives/labels_softseg/sub-beijingPrisma03/anat/sub-beijingPrisma03_flip-2_mt-off_space-other_MTS_softseg.json b/derivatives/labels_softseg/sub-beijingPrisma03/anat/sub-beijingPrisma03_flip-2_mt-off_space-other_MTS_label-SC_softseg.json similarity index 100% rename from derivatives/labels_softseg/sub-beijingPrisma03/anat/sub-beijingPrisma03_flip-2_mt-off_space-other_MTS_softseg.json rename to derivatives/labels_softseg/sub-beijingPrisma03/anat/sub-beijingPrisma03_flip-2_mt-off_space-other_MTS_label-SC_softseg.json diff --git a/derivatives/labels_softseg/sub-beijingPrisma03/anat/sub-beijingPrisma03_flip-2_mt-off_space-other_MTS_softseg.nii.gz b/derivatives/labels_softseg/sub-beijingPrisma03/anat/sub-beijingPrisma03_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz similarity index 100% rename from derivatives/labels_softseg/sub-beijingPrisma03/anat/sub-beijingPrisma03_flip-2_mt-off_space-other_MTS_softseg.nii.gz rename to 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derivatives/labels_softseg/sub-beijingPrisma03/anat/sub-beijingPrisma03_space-other_T2w_label-SC_softseg.nii.gz diff --git a/derivatives/labels_softseg/sub-beijingPrisma03/dwi/sub-beijingPrisma03_rec-average_dwi_softseg.json b/derivatives/labels_softseg/sub-beijingPrisma03/dwi/sub-beijingPrisma03_rec-average_dwi_label-SC_softseg.json similarity index 100% rename from derivatives/labels_softseg/sub-beijingPrisma03/dwi/sub-beijingPrisma03_rec-average_dwi_softseg.json rename to derivatives/labels_softseg/sub-beijingPrisma03/dwi/sub-beijingPrisma03_rec-average_dwi_label-SC_softseg.json diff --git a/derivatives/labels_softseg/sub-beijingPrisma03/dwi/sub-beijingPrisma03_rec-average_dwi_softseg.nii.gz b/derivatives/labels_softseg/sub-beijingPrisma03/dwi/sub-beijingPrisma03_rec-average_dwi_label-SC_softseg.nii.gz similarity index 100% rename from derivatives/labels_softseg/sub-beijingPrisma03/dwi/sub-beijingPrisma03_rec-average_dwi_softseg.nii.gz rename to derivatives/labels_softseg/sub-beijingPrisma03/dwi/sub-beijingPrisma03_rec-average_dwi_label-SC_softseg.nii.gz diff --git a/derivatives/labels_softseg/sub-beijingPrisma04/anat/sub-beijingPrisma04_flip-1_mt-on_space-other_MTS_softseg.json b/derivatives/labels_softseg/sub-beijingPrisma04/anat/sub-beijingPrisma04_flip-1_mt-on_space-other_MTS_label-SC_softseg.json similarity index 100% rename from derivatives/labels_softseg/sub-beijingPrisma04/anat/sub-beijingPrisma04_flip-1_mt-on_space-other_MTS_softseg.json rename to derivatives/labels_softseg/sub-beijingPrisma04/anat/sub-beijingPrisma04_flip-1_mt-on_space-other_MTS_label-SC_softseg.json diff --git a/derivatives/labels_softseg/sub-beijingPrisma04/anat/sub-beijingPrisma04_flip-1_mt-on_space-other_MTS_softseg.nii.gz b/derivatives/labels_softseg/sub-beijingPrisma04/anat/sub-beijingPrisma04_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz similarity index 100% rename from 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a/derivatives/labels_softseg/sub-beijingPrisma04/anat/sub-beijingPrisma04_space-other_T1w_softseg.nii.gz b/derivatives/labels_softseg/sub-beijingPrisma04/anat/sub-beijingPrisma04_space-other_T1w_label-SC_softseg.nii.gz similarity index 100% rename from derivatives/labels_softseg/sub-beijingPrisma04/anat/sub-beijingPrisma04_space-other_T1w_softseg.nii.gz rename to derivatives/labels_softseg/sub-beijingPrisma04/anat/sub-beijingPrisma04_space-other_T1w_label-SC_softseg.nii.gz diff --git a/derivatives/labels_softseg/sub-beijingPrisma04/anat/sub-beijingPrisma04_space-other_T2star_softseg.json b/derivatives/labels_softseg/sub-beijingPrisma04/anat/sub-beijingPrisma04_space-other_T2star_label-SC_softseg.json similarity index 100% rename from derivatives/labels_softseg/sub-beijingPrisma04/anat/sub-beijingPrisma04_space-other_T2star_softseg.json rename to derivatives/labels_softseg/sub-beijingPrisma04/anat/sub-beijingPrisma04_space-other_T2star_label-SC_softseg.json diff --git a/derivatives/labels_softseg/sub-beijingPrisma04/anat/sub-beijingPrisma04_space-other_T2star_softseg.nii.gz b/derivatives/labels_softseg/sub-beijingPrisma04/anat/sub-beijingPrisma04_space-other_T2star_label-SC_softseg.nii.gz similarity index 100% rename from derivatives/labels_softseg/sub-beijingPrisma04/anat/sub-beijingPrisma04_space-other_T2star_softseg.nii.gz rename to derivatives/labels_softseg/sub-beijingPrisma04/anat/sub-beijingPrisma04_space-other_T2star_label-SC_softseg.nii.gz diff --git a/derivatives/labels_softseg/sub-beijingPrisma04/anat/sub-beijingPrisma04_space-other_T2w_softseg.json b/derivatives/labels_softseg/sub-beijingPrisma04/anat/sub-beijingPrisma04_space-other_T2w_label-SC_softseg.json similarity index 100% rename from derivatives/labels_softseg/sub-beijingPrisma04/anat/sub-beijingPrisma04_space-other_T2w_softseg.json rename to derivatives/labels_softseg/sub-beijingPrisma04/anat/sub-beijingPrisma04_space-other_T2w_label-SC_softseg.json diff --git a/derivatives/labels_softseg/sub-beijingPrisma04/anat/sub-beijingPrisma04_space-other_T2w_softseg.nii.gz b/derivatives/labels_softseg/sub-beijingPrisma04/anat/sub-beijingPrisma04_space-other_T2w_label-SC_softseg.nii.gz similarity index 100% rename from derivatives/labels_softseg/sub-beijingPrisma04/anat/sub-beijingPrisma04_space-other_T2w_softseg.nii.gz rename to derivatives/labels_softseg/sub-beijingPrisma04/anat/sub-beijingPrisma04_space-other_T2w_label-SC_softseg.nii.gz diff --git a/derivatives/labels_softseg/sub-beijingPrisma04/dwi/sub-beijingPrisma04_rec-average_dwi_softseg.json b/derivatives/labels_softseg/sub-beijingPrisma04/dwi/sub-beijingPrisma04_rec-average_dwi_label-SC_softseg.json similarity index 100% rename from derivatives/labels_softseg/sub-beijingPrisma04/dwi/sub-beijingPrisma04_rec-average_dwi_softseg.json rename to derivatives/labels_softseg/sub-beijingPrisma04/dwi/sub-beijingPrisma04_rec-average_dwi_label-SC_softseg.json diff --git a/derivatives/labels_softseg/sub-beijingPrisma04/dwi/sub-beijingPrisma04_rec-average_dwi_softseg.nii.gz b/derivatives/labels_softseg/sub-beijingPrisma04/dwi/sub-beijingPrisma04_rec-average_dwi_label-SC_softseg.nii.gz similarity index 100% rename from derivatives/labels_softseg/sub-beijingPrisma04/dwi/sub-beijingPrisma04_rec-average_dwi_softseg.nii.gz rename to derivatives/labels_softseg/sub-beijingPrisma04/dwi/sub-beijingPrisma04_rec-average_dwi_label-SC_softseg.nii.gz diff --git a/derivatives/labels_softseg/sub-beijingPrisma05/anat/sub-beijingPrisma05_flip-1_mt-on_space-other_MTS_softseg.json b/derivatives/labels_softseg/sub-beijingPrisma05/anat/sub-beijingPrisma05_flip-1_mt-on_space-other_MTS_label-SC_softseg.json similarity index 100% rename from derivatives/labels_softseg/sub-beijingPrisma05/anat/sub-beijingPrisma05_flip-1_mt-on_space-other_MTS_softseg.json rename to 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diff --git a/derivatives/labels_softseg/sub-cardiff02/anat/sub-cardiff02_space-other_T2w_softseg.json b/derivatives/labels_softseg/sub-cardiff02/anat/sub-cardiff02_space-other_T2w_label-SC_softseg.json similarity index 100% rename from derivatives/labels_softseg/sub-cardiff02/anat/sub-cardiff02_space-other_T2w_softseg.json rename to derivatives/labels_softseg/sub-cardiff02/anat/sub-cardiff02_space-other_T2w_label-SC_softseg.json diff --git a/derivatives/labels_softseg/sub-cardiff02/anat/sub-cardiff02_space-other_T2w_softseg.nii.gz b/derivatives/labels_softseg/sub-cardiff02/anat/sub-cardiff02_space-other_T2w_label-SC_softseg.nii.gz similarity index 100% rename from derivatives/labels_softseg/sub-cardiff02/anat/sub-cardiff02_space-other_T2w_softseg.nii.gz rename to derivatives/labels_softseg/sub-cardiff02/anat/sub-cardiff02_space-other_T2w_label-SC_softseg.nii.gz diff --git a/derivatives/labels_softseg/sub-cardiff02/dwi/sub-cardiff02_rec-average_dwi_softseg.json 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a/derivatives/labels_softseg/sub-cardiff03/anat/sub-cardiff03_space-other_T2w_softseg.nii.gz b/derivatives/labels_softseg/sub-cardiff03/anat/sub-cardiff03_space-other_T2w_label-SC_softseg.nii.gz similarity index 100% rename from derivatives/labels_softseg/sub-cardiff03/anat/sub-cardiff03_space-other_T2w_softseg.nii.gz rename to derivatives/labels_softseg/sub-cardiff03/anat/sub-cardiff03_space-other_T2w_label-SC_softseg.nii.gz diff --git a/derivatives/labels_softseg/sub-cardiff03/dwi/sub-cardiff03_rec-average_dwi_softseg.json b/derivatives/labels_softseg/sub-cardiff03/dwi/sub-cardiff03_rec-average_dwi_label-SC_softseg.json similarity index 100% rename from derivatives/labels_softseg/sub-cardiff03/dwi/sub-cardiff03_rec-average_dwi_softseg.json rename to derivatives/labels_softseg/sub-cardiff03/dwi/sub-cardiff03_rec-average_dwi_label-SC_softseg.json diff --git a/derivatives/labels_softseg/sub-cardiff03/dwi/sub-cardiff03_rec-average_dwi_softseg.nii.gz 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a/derivatives/labels_softseg/sub-cardiff05/anat/sub-cardiff05_space-other_T2star_softseg.json b/derivatives/labels_softseg/sub-cardiff05/anat/sub-cardiff05_space-other_T2star_label-SC_softseg.json similarity index 100% rename from derivatives/labels_softseg/sub-cardiff05/anat/sub-cardiff05_space-other_T2star_softseg.json rename to derivatives/labels_softseg/sub-cardiff05/anat/sub-cardiff05_space-other_T2star_label-SC_softseg.json diff --git a/derivatives/labels_softseg/sub-cardiff05/anat/sub-cardiff05_space-other_T2star_softseg.nii.gz b/derivatives/labels_softseg/sub-cardiff05/anat/sub-cardiff05_space-other_T2star_label-SC_softseg.nii.gz similarity index 100% rename from derivatives/labels_softseg/sub-cardiff05/anat/sub-cardiff05_space-other_T2star_softseg.nii.gz rename to derivatives/labels_softseg/sub-cardiff05/anat/sub-cardiff05_space-other_T2star_label-SC_softseg.nii.gz diff --git a/derivatives/labels_softseg/sub-cardiff05/anat/sub-cardiff05_space-other_T2w_softseg.json 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to derivatives/labels_softseg/sub-fslPrisma03/dwi/sub-fslPrisma03_rec-average_dwi_label-SC_softseg.nii.gz diff --git a/derivatives/labels_softseg/sub-fslPrisma04/anat/sub-fslPrisma04_flip-1_mt-on_space-other_MTS_softseg.json b/derivatives/labels_softseg/sub-fslPrisma04/anat/sub-fslPrisma04_flip-1_mt-on_space-other_MTS_label-SC_softseg.json similarity index 100% rename from derivatives/labels_softseg/sub-fslPrisma04/anat/sub-fslPrisma04_flip-1_mt-on_space-other_MTS_softseg.json rename to derivatives/labels_softseg/sub-fslPrisma04/anat/sub-fslPrisma04_flip-1_mt-on_space-other_MTS_label-SC_softseg.json diff --git a/derivatives/labels_softseg/sub-fslPrisma04/anat/sub-fslPrisma04_flip-1_mt-on_space-other_MTS_softseg.nii.gz b/derivatives/labels_softseg/sub-fslPrisma04/anat/sub-fslPrisma04_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz similarity index 100% rename from derivatives/labels_softseg/sub-fslPrisma04/anat/sub-fslPrisma04_flip-1_mt-on_space-other_MTS_softseg.nii.gz rename to 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to derivatives/labels_softseg/sub-fslPrisma04/dwi/sub-fslPrisma04_rec-average_dwi_label-SC_softseg.nii.gz diff --git a/derivatives/labels_softseg/sub-fslPrisma05/anat/sub-fslPrisma05_flip-1_mt-on_space-other_MTS_softseg.json b/derivatives/labels_softseg/sub-fslPrisma05/anat/sub-fslPrisma05_flip-1_mt-on_space-other_MTS_label-SC_softseg.json similarity index 100% rename from derivatives/labels_softseg/sub-fslPrisma05/anat/sub-fslPrisma05_flip-1_mt-on_space-other_MTS_softseg.json rename to derivatives/labels_softseg/sub-fslPrisma05/anat/sub-fslPrisma05_flip-1_mt-on_space-other_MTS_label-SC_softseg.json diff --git a/derivatives/labels_softseg/sub-fslPrisma05/anat/sub-fslPrisma05_flip-1_mt-on_space-other_MTS_softseg.nii.gz b/derivatives/labels_softseg/sub-fslPrisma05/anat/sub-fslPrisma05_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz similarity index 100% rename from derivatives/labels_softseg/sub-fslPrisma05/anat/sub-fslPrisma05_flip-1_mt-on_space-other_MTS_softseg.nii.gz rename to 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to derivatives/labels_softseg/sub-fslPrisma05/dwi/sub-fslPrisma05_rec-average_dwi_label-SC_softseg.nii.gz diff --git a/derivatives/labels_softseg/sub-fslPrisma06/anat/sub-fslPrisma06_flip-1_mt-on_space-other_MTS_softseg.json b/derivatives/labels_softseg/sub-fslPrisma06/anat/sub-fslPrisma06_flip-1_mt-on_space-other_MTS_label-SC_softseg.json similarity index 100% rename from derivatives/labels_softseg/sub-fslPrisma06/anat/sub-fslPrisma06_flip-1_mt-on_space-other_MTS_softseg.json rename to derivatives/labels_softseg/sub-fslPrisma06/anat/sub-fslPrisma06_flip-1_mt-on_space-other_MTS_label-SC_softseg.json diff --git a/derivatives/labels_softseg/sub-fslPrisma06/anat/sub-fslPrisma06_flip-1_mt-on_space-other_MTS_softseg.nii.gz b/derivatives/labels_softseg/sub-fslPrisma06/anat/sub-fslPrisma06_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz similarity index 100% rename from derivatives/labels_softseg/sub-fslPrisma06/anat/sub-fslPrisma06_flip-1_mt-on_space-other_MTS_softseg.nii.gz rename to 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diff --git a/derivatives/labels_softseg/sub-hamburg02/anat/sub-hamburg02_space-other_T2w_softseg.json b/derivatives/labels_softseg/sub-hamburg02/anat/sub-hamburg02_space-other_T2w_label-SC_softseg.json similarity index 100% rename from derivatives/labels_softseg/sub-hamburg02/anat/sub-hamburg02_space-other_T2w_softseg.json rename to derivatives/labels_softseg/sub-hamburg02/anat/sub-hamburg02_space-other_T2w_label-SC_softseg.json diff --git a/derivatives/labels_softseg/sub-hamburg02/anat/sub-hamburg02_space-other_T2w_softseg.nii.gz b/derivatives/labels_softseg/sub-hamburg02/anat/sub-hamburg02_space-other_T2w_label-SC_softseg.nii.gz similarity index 100% rename from derivatives/labels_softseg/sub-hamburg02/anat/sub-hamburg02_space-other_T2w_softseg.nii.gz rename to derivatives/labels_softseg/sub-hamburg02/anat/sub-hamburg02_space-other_T2w_label-SC_softseg.nii.gz diff --git a/derivatives/labels_softseg/sub-hamburg02/dwi/sub-hamburg02_rec-average_dwi_softseg.json 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a/derivatives/labels_softseg/sub-hamburg05/anat/sub-hamburg05_space-other_T2star_softseg.json b/derivatives/labels_softseg/sub-hamburg05/anat/sub-hamburg05_space-other_T2star_label-SC_softseg.json similarity index 100% rename from derivatives/labels_softseg/sub-hamburg05/anat/sub-hamburg05_space-other_T2star_softseg.json rename to derivatives/labels_softseg/sub-hamburg05/anat/sub-hamburg05_space-other_T2star_label-SC_softseg.json diff --git a/derivatives/labels_softseg/sub-hamburg05/anat/sub-hamburg05_space-other_T2star_softseg.nii.gz b/derivatives/labels_softseg/sub-hamburg05/anat/sub-hamburg05_space-other_T2star_label-SC_softseg.nii.gz similarity index 100% rename from derivatives/labels_softseg/sub-hamburg05/anat/sub-hamburg05_space-other_T2star_softseg.nii.gz rename to derivatives/labels_softseg/sub-hamburg05/anat/sub-hamburg05_space-other_T2star_label-SC_softseg.nii.gz diff --git a/derivatives/labels_softseg/sub-hamburg05/anat/sub-hamburg05_space-other_T2w_softseg.json 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from derivatives/labels_softseg/sub-hamburg05/dwi/sub-hamburg05_rec-average_dwi_softseg.json rename to derivatives/labels_softseg/sub-hamburg05/dwi/sub-hamburg05_rec-average_dwi_label-SC_softseg.json diff --git a/derivatives/labels_softseg/sub-hamburg05/dwi/sub-hamburg05_rec-average_dwi_softseg.nii.gz b/derivatives/labels_softseg/sub-hamburg05/dwi/sub-hamburg05_rec-average_dwi_label-SC_softseg.nii.gz similarity index 100% rename from derivatives/labels_softseg/sub-hamburg05/dwi/sub-hamburg05_rec-average_dwi_softseg.nii.gz rename to derivatives/labels_softseg/sub-hamburg05/dwi/sub-hamburg05_rec-average_dwi_label-SC_softseg.nii.gz diff --git a/derivatives/labels_softseg/sub-hamburg06/anat/sub-hamburg06_flip-1_mt-on_space-other_MTS_softseg.json b/derivatives/labels_softseg/sub-hamburg06/anat/sub-hamburg06_flip-1_mt-on_space-other_MTS_label-SC_softseg.json similarity index 100% rename from derivatives/labels_softseg/sub-hamburg06/anat/sub-hamburg06_flip-1_mt-on_space-other_MTS_softseg.json 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a/derivatives/labels_softseg/sub-hamburg06/anat/sub-hamburg06_space-other_T2star_softseg.nii.gz b/derivatives/labels_softseg/sub-hamburg06/anat/sub-hamburg06_space-other_T2star_label-SC_softseg.nii.gz similarity index 100% rename from derivatives/labels_softseg/sub-hamburg06/anat/sub-hamburg06_space-other_T2star_softseg.nii.gz rename to derivatives/labels_softseg/sub-hamburg06/anat/sub-hamburg06_space-other_T2star_label-SC_softseg.nii.gz diff --git a/derivatives/labels_softseg/sub-hamburg06/anat/sub-hamburg06_space-other_T2w_softseg.json b/derivatives/labels_softseg/sub-hamburg06/anat/sub-hamburg06_space-other_T2w_label-SC_softseg.json similarity index 100% rename from derivatives/labels_softseg/sub-hamburg06/anat/sub-hamburg06_space-other_T2w_softseg.json rename to derivatives/labels_softseg/sub-hamburg06/anat/sub-hamburg06_space-other_T2w_label-SC_softseg.json diff --git a/derivatives/labels_softseg/sub-hamburg06/anat/sub-hamburg06_space-other_T2w_softseg.nii.gz 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diff --git a/derivatives/labels_softseg/sub-mniPilot1/anat/sub-mniPilot1_flip-1_mt-on_space-other_MTS_softseg.nii.gz b/derivatives/labels_softseg/sub-mniPilot1/anat/sub-mniPilot1_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz similarity index 100% rename from derivatives/labels_softseg/sub-mniPilot1/anat/sub-mniPilot1_flip-1_mt-on_space-other_MTS_softseg.nii.gz rename to derivatives/labels_softseg/sub-mniPilot1/anat/sub-mniPilot1_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz diff --git a/derivatives/labels_softseg/sub-mniPilot1/anat/sub-mniPilot1_flip-2_mt-off_space-other_MTS_softseg.json b/derivatives/labels_softseg/sub-mniPilot1/anat/sub-mniPilot1_flip-2_mt-off_space-other_MTS_label-SC_softseg.json similarity index 100% rename from derivatives/labels_softseg/sub-mniPilot1/anat/sub-mniPilot1_flip-2_mt-off_space-other_MTS_softseg.json rename to derivatives/labels_softseg/sub-mniPilot1/anat/sub-mniPilot1_flip-2_mt-off_space-other_MTS_label-SC_softseg.json diff --git 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from derivatives/labels_softseg/sub-mountSinai01/anat/sub-mountSinai01_space-other_T1w_softseg.json rename to derivatives/labels_softseg/sub-mountSinai01/anat/sub-mountSinai01_space-other_T1w_label-SC_softseg.json diff --git a/derivatives/labels_softseg/sub-mountSinai01/anat/sub-mountSinai01_space-other_T1w_softseg.nii.gz b/derivatives/labels_softseg/sub-mountSinai01/anat/sub-mountSinai01_space-other_T1w_label-SC_softseg.nii.gz similarity index 100% rename from derivatives/labels_softseg/sub-mountSinai01/anat/sub-mountSinai01_space-other_T1w_softseg.nii.gz rename to derivatives/labels_softseg/sub-mountSinai01/anat/sub-mountSinai01_space-other_T1w_label-SC_softseg.nii.gz diff --git a/derivatives/labels_softseg/sub-mountSinai01/anat/sub-mountSinai01_space-other_T2star_softseg.json b/derivatives/labels_softseg/sub-mountSinai01/anat/sub-mountSinai01_space-other_T2star_label-SC_softseg.json similarity index 100% rename from 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from derivatives/labels_softseg/sub-perform02/dwi/sub-perform02_rec-average_dwi_softseg.json rename to derivatives/labels_softseg/sub-perform02/dwi/sub-perform02_rec-average_dwi_label-SC_softseg.json diff --git a/derivatives/labels_softseg/sub-perform02/dwi/sub-perform02_rec-average_dwi_softseg.nii.gz b/derivatives/labels_softseg/sub-perform02/dwi/sub-perform02_rec-average_dwi_label-SC_softseg.nii.gz similarity index 100% rename from derivatives/labels_softseg/sub-perform02/dwi/sub-perform02_rec-average_dwi_softseg.nii.gz rename to derivatives/labels_softseg/sub-perform02/dwi/sub-perform02_rec-average_dwi_label-SC_softseg.nii.gz diff --git a/derivatives/labels_softseg/sub-perform03/anat/sub-perform03_flip-1_mt-on_space-other_MTS_softseg.json b/derivatives/labels_softseg/sub-perform03/anat/sub-perform03_flip-1_mt-on_space-other_MTS_label-SC_softseg.json similarity index 100% rename from derivatives/labels_softseg/sub-perform03/anat/sub-perform03_flip-1_mt-on_space-other_MTS_softseg.json 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diff --git a/derivatives/labels_softseg/sub-perform04/anat/sub-perform04_space-other_T2w_softseg.json b/derivatives/labels_softseg/sub-perform04/anat/sub-perform04_space-other_T2w_label-SC_softseg.json similarity index 100% rename from derivatives/labels_softseg/sub-perform04/anat/sub-perform04_space-other_T2w_softseg.json rename to derivatives/labels_softseg/sub-perform04/anat/sub-perform04_space-other_T2w_label-SC_softseg.json diff --git a/derivatives/labels_softseg/sub-perform04/anat/sub-perform04_space-other_T2w_softseg.nii.gz b/derivatives/labels_softseg/sub-perform04/anat/sub-perform04_space-other_T2w_label-SC_softseg.nii.gz similarity index 100% rename from derivatives/labels_softseg/sub-perform04/anat/sub-perform04_space-other_T2w_softseg.nii.gz rename to derivatives/labels_softseg/sub-perform04/anat/sub-perform04_space-other_T2w_label-SC_softseg.nii.gz diff --git a/derivatives/labels_softseg/sub-perform04/dwi/sub-perform04_rec-average_dwi_softseg.json 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diff --git a/derivatives/labels_softseg/sub-tehranS06/anat/sub-tehranS06_space-other_T2w_softseg.json b/derivatives/labels_softseg/sub-tehranS06/anat/sub-tehranS06_space-other_T2w_label-SC_softseg.json similarity index 100% rename from derivatives/labels_softseg/sub-tehranS06/anat/sub-tehranS06_space-other_T2w_softseg.json rename to derivatives/labels_softseg/sub-tehranS06/anat/sub-tehranS06_space-other_T2w_label-SC_softseg.json diff --git a/derivatives/labels_softseg/sub-tehranS06/anat/sub-tehranS06_space-other_T2w_softseg.nii.gz b/derivatives/labels_softseg/sub-tehranS06/anat/sub-tehranS06_space-other_T2w_label-SC_softseg.nii.gz similarity index 100% rename from derivatives/labels_softseg/sub-tehranS06/anat/sub-tehranS06_space-other_T2w_softseg.nii.gz rename to derivatives/labels_softseg/sub-tehranS06/anat/sub-tehranS06_space-other_T2w_label-SC_softseg.nii.gz diff --git a/derivatives/labels_softseg/sub-tehranS06/dwi/sub-tehranS06_rec-average_dwi_softseg.json 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similarity index 100% rename from derivatives/labels_softseg/sub-tokyo750w01/anat/sub-tokyo750w01_flip-1_mt-on_space-other_MTS_softseg.json rename to derivatives/labels_softseg/sub-tokyo750w01/anat/sub-tokyo750w01_flip-1_mt-on_space-other_MTS_label-SC_softseg.json diff --git a/derivatives/labels_softseg/sub-tokyo750w01/anat/sub-tokyo750w01_flip-1_mt-on_space-other_MTS_softseg.nii.gz b/derivatives/labels_softseg/sub-tokyo750w01/anat/sub-tokyo750w01_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz similarity index 100% rename from derivatives/labels_softseg/sub-tokyo750w01/anat/sub-tokyo750w01_flip-1_mt-on_space-other_MTS_softseg.nii.gz rename to derivatives/labels_softseg/sub-tokyo750w01/anat/sub-tokyo750w01_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz diff --git a/derivatives/labels_softseg/sub-tokyo750w01/anat/sub-tokyo750w01_flip-2_mt-off_space-other_MTS_softseg.json 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a/derivatives/labels_softseg/sub-tokyo750w01/anat/sub-tokyo750w01_space-other_T1w_softseg.json b/derivatives/labels_softseg/sub-tokyo750w01/anat/sub-tokyo750w01_space-other_T1w_label-SC_softseg.json similarity index 100% rename from derivatives/labels_softseg/sub-tokyo750w01/anat/sub-tokyo750w01_space-other_T1w_softseg.json rename to derivatives/labels_softseg/sub-tokyo750w01/anat/sub-tokyo750w01_space-other_T1w_label-SC_softseg.json diff --git a/derivatives/labels_softseg/sub-tokyo750w01/anat/sub-tokyo750w01_space-other_T1w_softseg.nii.gz b/derivatives/labels_softseg/sub-tokyo750w01/anat/sub-tokyo750w01_space-other_T1w_label-SC_softseg.nii.gz similarity index 100% rename from derivatives/labels_softseg/sub-tokyo750w01/anat/sub-tokyo750w01_space-other_T1w_softseg.nii.gz rename to derivatives/labels_softseg/sub-tokyo750w01/anat/sub-tokyo750w01_space-other_T1w_label-SC_softseg.nii.gz diff --git a/derivatives/labels_softseg/sub-tokyo750w01/anat/sub-tokyo750w01_space-other_T2star_softseg.json b/derivatives/labels_softseg/sub-tokyo750w01/anat/sub-tokyo750w01_space-other_T2star_label-SC_softseg.json similarity index 100% rename from derivatives/labels_softseg/sub-tokyo750w01/anat/sub-tokyo750w01_space-other_T2star_softseg.json rename to derivatives/labels_softseg/sub-tokyo750w01/anat/sub-tokyo750w01_space-other_T2star_label-SC_softseg.json diff --git a/derivatives/labels_softseg/sub-tokyo750w01/anat/sub-tokyo750w01_space-other_T2star_softseg.nii.gz b/derivatives/labels_softseg/sub-tokyo750w01/anat/sub-tokyo750w01_space-other_T2star_label-SC_softseg.nii.gz similarity index 100% rename from derivatives/labels_softseg/sub-tokyo750w01/anat/sub-tokyo750w01_space-other_T2star_softseg.nii.gz rename to derivatives/labels_softseg/sub-tokyo750w01/anat/sub-tokyo750w01_space-other_T2star_label-SC_softseg.nii.gz diff --git a/derivatives/labels_softseg/sub-tokyo750w01/anat/sub-tokyo750w01_space-other_T2w_softseg.json b/derivatives/labels_softseg/sub-tokyo750w01/anat/sub-tokyo750w01_space-other_T2w_label-SC_softseg.json similarity index 100% rename from derivatives/labels_softseg/sub-tokyo750w01/anat/sub-tokyo750w01_space-other_T2w_softseg.json rename to derivatives/labels_softseg/sub-tokyo750w01/anat/sub-tokyo750w01_space-other_T2w_label-SC_softseg.json diff --git a/derivatives/labels_softseg/sub-tokyo750w01/anat/sub-tokyo750w01_space-other_T2w_softseg.nii.gz b/derivatives/labels_softseg/sub-tokyo750w01/anat/sub-tokyo750w01_space-other_T2w_label-SC_softseg.nii.gz similarity index 100% rename from derivatives/labels_softseg/sub-tokyo750w01/anat/sub-tokyo750w01_space-other_T2w_softseg.nii.gz rename to derivatives/labels_softseg/sub-tokyo750w01/anat/sub-tokyo750w01_space-other_T2w_label-SC_softseg.nii.gz diff --git a/derivatives/labels_softseg/sub-tokyo750w01/dwi/sub-tokyo750w01_rec-average_dwi_softseg.json 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to derivatives/labels_softseg/sub-tokyo750w03/dwi/sub-tokyo750w03_rec-average_dwi_label-SC_softseg.nii.gz diff --git a/derivatives/labels_softseg/sub-tokyo750w04/anat/sub-tokyo750w04_flip-1_mt-on_space-other_MTS_softseg.json b/derivatives/labels_softseg/sub-tokyo750w04/anat/sub-tokyo750w04_flip-1_mt-on_space-other_MTS_label-SC_softseg.json similarity index 100% rename from derivatives/labels_softseg/sub-tokyo750w04/anat/sub-tokyo750w04_flip-1_mt-on_space-other_MTS_softseg.json rename to derivatives/labels_softseg/sub-tokyo750w04/anat/sub-tokyo750w04_flip-1_mt-on_space-other_MTS_label-SC_softseg.json diff --git a/derivatives/labels_softseg/sub-tokyo750w04/anat/sub-tokyo750w04_flip-1_mt-on_space-other_MTS_softseg.nii.gz b/derivatives/labels_softseg/sub-tokyo750w04/anat/sub-tokyo750w04_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz similarity index 100% rename from derivatives/labels_softseg/sub-tokyo750w04/anat/sub-tokyo750w04_flip-1_mt-on_space-other_MTS_softseg.nii.gz rename to 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from derivatives/labels_softseg_bin/sub-fslAchieva02/dwi/sub-fslAchieva02_rec-average_dwi_softseg_bin.json rename to derivatives/labels_softseg_bin/sub-fslAchieva02/dwi/sub-fslAchieva02_rec-average_dwi_desc-softseg_label-SC_seg.json diff --git a/derivatives/labels_softseg_bin/sub-fslAchieva02/dwi/sub-fslAchieva02_rec-average_dwi_softseg_bin.nii.gz b/derivatives/labels_softseg_bin/sub-fslAchieva02/dwi/sub-fslAchieva02_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz similarity index 100% rename from derivatives/labels_softseg_bin/sub-fslAchieva02/dwi/sub-fslAchieva02_rec-average_dwi_softseg_bin.nii.gz rename to derivatives/labels_softseg_bin/sub-fslAchieva02/dwi/sub-fslAchieva02_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-fslAchieva03/anat/sub-fslAchieva03_flip-1_mt-on_space-other_MTS_softseg_bin.json b/derivatives/labels_softseg_bin/sub-fslAchieva03/anat/sub-fslAchieva03_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json 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a/derivatives/labels_softseg_bin/sub-fslAchieva03/anat/sub-fslAchieva03_space-other_T1w_softseg_bin.json b/derivatives/labels_softseg_bin/sub-fslAchieva03/anat/sub-fslAchieva03_space-other_T1w_desc-softseg_label-SC_seg.json similarity index 100% rename from derivatives/labels_softseg_bin/sub-fslAchieva03/anat/sub-fslAchieva03_space-other_T1w_softseg_bin.json rename to derivatives/labels_softseg_bin/sub-fslAchieva03/anat/sub-fslAchieva03_space-other_T1w_desc-softseg_label-SC_seg.json diff --git a/derivatives/labels_softseg_bin/sub-fslAchieva03/anat/sub-fslAchieva03_space-other_T1w_softseg_bin.nii.gz b/derivatives/labels_softseg_bin/sub-fslAchieva03/anat/sub-fslAchieva03_space-other_T1w_desc-softseg_label-SC_seg.nii.gz similarity index 100% rename from derivatives/labels_softseg_bin/sub-fslAchieva03/anat/sub-fslAchieva03_space-other_T1w_softseg_bin.nii.gz rename to derivatives/labels_softseg_bin/sub-fslAchieva03/anat/sub-fslAchieva03_space-other_T1w_desc-softseg_label-SC_seg.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-fslAchieva03/anat/sub-fslAchieva03_space-other_T2star_softseg_bin.json b/derivatives/labels_softseg_bin/sub-fslAchieva03/anat/sub-fslAchieva03_space-other_T2star_desc-softseg_label-SC_seg.json similarity index 100% rename from derivatives/labels_softseg_bin/sub-fslAchieva03/anat/sub-fslAchieva03_space-other_T2star_softseg_bin.json rename to derivatives/labels_softseg_bin/sub-fslAchieva03/anat/sub-fslAchieva03_space-other_T2star_desc-softseg_label-SC_seg.json diff --git a/derivatives/labels_softseg_bin/sub-fslAchieva03/anat/sub-fslAchieva03_space-other_T2star_softseg_bin.nii.gz b/derivatives/labels_softseg_bin/sub-fslAchieva03/anat/sub-fslAchieva03_space-other_T2star_desc-softseg_label-SC_seg.nii.gz similarity index 100% rename from derivatives/labels_softseg_bin/sub-fslAchieva03/anat/sub-fslAchieva03_space-other_T2star_softseg_bin.nii.gz rename to 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a/derivatives/labels_softseg_bin/sub-fslAchieva05/anat/sub-fslAchieva05_space-other_T1w_softseg_bin.json b/derivatives/labels_softseg_bin/sub-fslAchieva05/anat/sub-fslAchieva05_space-other_T1w_desc-softseg_label-SC_seg.json similarity index 100% rename from derivatives/labels_softseg_bin/sub-fslAchieva05/anat/sub-fslAchieva05_space-other_T1w_softseg_bin.json rename to derivatives/labels_softseg_bin/sub-fslAchieva05/anat/sub-fslAchieva05_space-other_T1w_desc-softseg_label-SC_seg.json diff --git a/derivatives/labels_softseg_bin/sub-fslAchieva05/anat/sub-fslAchieva05_space-other_T1w_softseg_bin.nii.gz b/derivatives/labels_softseg_bin/sub-fslAchieva05/anat/sub-fslAchieva05_space-other_T1w_desc-softseg_label-SC_seg.nii.gz similarity index 100% rename from derivatives/labels_softseg_bin/sub-fslAchieva05/anat/sub-fslAchieva05_space-other_T1w_softseg_bin.nii.gz rename to derivatives/labels_softseg_bin/sub-fslAchieva05/anat/sub-fslAchieva05_space-other_T1w_desc-softseg_label-SC_seg.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-fslAchieva05/anat/sub-fslAchieva05_space-other_T2star_softseg_bin.json b/derivatives/labels_softseg_bin/sub-fslAchieva05/anat/sub-fslAchieva05_space-other_T2star_desc-softseg_label-SC_seg.json similarity index 100% rename from derivatives/labels_softseg_bin/sub-fslAchieva05/anat/sub-fslAchieva05_space-other_T2star_softseg_bin.json rename to derivatives/labels_softseg_bin/sub-fslAchieva05/anat/sub-fslAchieva05_space-other_T2star_desc-softseg_label-SC_seg.json diff --git a/derivatives/labels_softseg_bin/sub-fslAchieva05/anat/sub-fslAchieva05_space-other_T2star_softseg_bin.nii.gz b/derivatives/labels_softseg_bin/sub-fslAchieva05/anat/sub-fslAchieva05_space-other_T2star_desc-softseg_label-SC_seg.nii.gz similarity index 100% rename from derivatives/labels_softseg_bin/sub-fslAchieva05/anat/sub-fslAchieva05_space-other_T2star_softseg_bin.nii.gz rename to 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a/derivatives/labels_softseg_bin/sub-tokyo750w03/anat/sub-tokyo750w03_space-other_T1w_softseg_bin.nii.gz b/derivatives/labels_softseg_bin/sub-tokyo750w03/anat/sub-tokyo750w03_space-other_T1w_desc-softseg_label-SC_seg.nii.gz similarity index 100% rename from derivatives/labels_softseg_bin/sub-tokyo750w03/anat/sub-tokyo750w03_space-other_T1w_softseg_bin.nii.gz rename to derivatives/labels_softseg_bin/sub-tokyo750w03/anat/sub-tokyo750w03_space-other_T1w_desc-softseg_label-SC_seg.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-tokyo750w03/anat/sub-tokyo750w03_space-other_T2star_softseg_bin.json b/derivatives/labels_softseg_bin/sub-tokyo750w03/anat/sub-tokyo750w03_space-other_T2star_desc-softseg_label-SC_seg.json similarity index 100% rename from derivatives/labels_softseg_bin/sub-tokyo750w03/anat/sub-tokyo750w03_space-other_T2star_softseg_bin.json rename to derivatives/labels_softseg_bin/sub-tokyo750w03/anat/sub-tokyo750w03_space-other_T2star_desc-softseg_label-SC_seg.json diff 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diff --git a/derivatives/labels_softseg_bin/sub-tokyo750w03/anat/sub-tokyo750w03_space-other_T2w_softseg_bin.nii.gz b/derivatives/labels_softseg_bin/sub-tokyo750w03/anat/sub-tokyo750w03_space-other_T2w_desc-softseg_label-SC_seg.nii.gz similarity index 100% rename from derivatives/labels_softseg_bin/sub-tokyo750w03/anat/sub-tokyo750w03_space-other_T2w_softseg_bin.nii.gz rename to derivatives/labels_softseg_bin/sub-tokyo750w03/anat/sub-tokyo750w03_space-other_T2w_desc-softseg_label-SC_seg.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-tokyo750w03/dwi/sub-tokyo750w03_rec-average_dwi_softseg_bin.json b/derivatives/labels_softseg_bin/sub-tokyo750w03/dwi/sub-tokyo750w03_rec-average_dwi_desc-softseg_label-SC_seg.json similarity index 100% rename from derivatives/labels_softseg_bin/sub-tokyo750w03/dwi/sub-tokyo750w03_rec-average_dwi_softseg_bin.json rename to derivatives/labels_softseg_bin/sub-tokyo750w03/dwi/sub-tokyo750w03_rec-average_dwi_desc-softseg_label-SC_seg.json diff --git a/derivatives/labels_softseg_bin/sub-tokyo750w03/dwi/sub-tokyo750w03_rec-average_dwi_softseg_bin.nii.gz b/derivatives/labels_softseg_bin/sub-tokyo750w03/dwi/sub-tokyo750w03_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz similarity index 100% rename from derivatives/labels_softseg_bin/sub-tokyo750w03/dwi/sub-tokyo750w03_rec-average_dwi_softseg_bin.nii.gz rename to derivatives/labels_softseg_bin/sub-tokyo750w03/dwi/sub-tokyo750w03_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-tokyo750w04/anat/sub-tokyo750w04_flip-1_mt-on_space-other_MTS_softseg_bin.json b/derivatives/labels_softseg_bin/sub-tokyo750w04/anat/sub-tokyo750w04_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json similarity index 100% rename from derivatives/labels_softseg_bin/sub-tokyo750w04/anat/sub-tokyo750w04_flip-1_mt-on_space-other_MTS_softseg_bin.json rename to 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b/derivatives/labels_softseg_bin/sub-tokyoSkyra02/anat/sub-tokyoSkyra02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz similarity index 100% rename from derivatives/labels_softseg_bin/sub-tokyoSkyra02/anat/sub-tokyoSkyra02_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz rename to derivatives/labels_softseg_bin/sub-tokyoSkyra02/anat/sub-tokyoSkyra02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-tokyoSkyra02/anat/sub-tokyoSkyra02_flip-2_mt-off_space-other_MTS_softseg_bin.json b/derivatives/labels_softseg_bin/sub-tokyoSkyra02/anat/sub-tokyoSkyra02_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json similarity index 100% rename from derivatives/labels_softseg_bin/sub-tokyoSkyra02/anat/sub-tokyoSkyra02_flip-2_mt-off_space-other_MTS_softseg_bin.json rename to derivatives/labels_softseg_bin/sub-tokyoSkyra02/anat/sub-tokyoSkyra02_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json diff --git a/derivatives/labels_softseg_bin/sub-tokyoSkyra02/anat/sub-tokyoSkyra02_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz b/derivatives/labels_softseg_bin/sub-tokyoSkyra02/anat/sub-tokyoSkyra02_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz similarity index 100% rename from derivatives/labels_softseg_bin/sub-tokyoSkyra02/anat/sub-tokyoSkyra02_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz rename to derivatives/labels_softseg_bin/sub-tokyoSkyra02/anat/sub-tokyoSkyra02_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-tokyoSkyra02/anat/sub-tokyoSkyra02_space-other_T1w_softseg_bin.json b/derivatives/labels_softseg_bin/sub-tokyoSkyra02/anat/sub-tokyoSkyra02_space-other_T1w_desc-softseg_label-SC_seg.json similarity index 100% rename from derivatives/labels_softseg_bin/sub-tokyoSkyra02/anat/sub-tokyoSkyra02_space-other_T1w_softseg_bin.json rename to 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similarity index 100% rename from derivatives/labels_softseg_bin/sub-tokyoSkyra02/dwi/sub-tokyoSkyra02_rec-average_dwi_softseg_bin.json rename to derivatives/labels_softseg_bin/sub-tokyoSkyra02/dwi/sub-tokyoSkyra02_rec-average_dwi_desc-softseg_label-SC_seg.json diff --git a/derivatives/labels_softseg_bin/sub-tokyoSkyra02/dwi/sub-tokyoSkyra02_rec-average_dwi_softseg_bin.nii.gz b/derivatives/labels_softseg_bin/sub-tokyoSkyra02/dwi/sub-tokyoSkyra02_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz similarity index 100% rename from derivatives/labels_softseg_bin/sub-tokyoSkyra02/dwi/sub-tokyoSkyra02_rec-average_dwi_softseg_bin.nii.gz rename to derivatives/labels_softseg_bin/sub-tokyoSkyra02/dwi/sub-tokyoSkyra02_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-tokyoSkyra03/anat/sub-tokyoSkyra03_flip-1_mt-on_space-other_MTS_softseg_bin.json b/derivatives/labels_softseg_bin/sub-tokyoSkyra03/anat/sub-tokyoSkyra03_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json similarity index 100% rename from derivatives/labels_softseg_bin/sub-tokyoSkyra03/anat/sub-tokyoSkyra03_flip-1_mt-on_space-other_MTS_softseg_bin.json rename to derivatives/labels_softseg_bin/sub-tokyoSkyra03/anat/sub-tokyoSkyra03_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json diff --git a/derivatives/labels_softseg_bin/sub-tokyoSkyra03/anat/sub-tokyoSkyra03_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz b/derivatives/labels_softseg_bin/sub-tokyoSkyra03/anat/sub-tokyoSkyra03_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz similarity index 100% rename from derivatives/labels_softseg_bin/sub-tokyoSkyra03/anat/sub-tokyoSkyra03_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz rename to derivatives/labels_softseg_bin/sub-tokyoSkyra03/anat/sub-tokyoSkyra03_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-tokyoSkyra03/anat/sub-tokyoSkyra03_flip-2_mt-off_space-other_MTS_softseg_bin.json b/derivatives/labels_softseg_bin/sub-tokyoSkyra03/anat/sub-tokyoSkyra03_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json similarity index 100% rename from derivatives/labels_softseg_bin/sub-tokyoSkyra03/anat/sub-tokyoSkyra03_flip-2_mt-off_space-other_MTS_softseg_bin.json rename to derivatives/labels_softseg_bin/sub-tokyoSkyra03/anat/sub-tokyoSkyra03_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json diff --git a/derivatives/labels_softseg_bin/sub-tokyoSkyra03/anat/sub-tokyoSkyra03_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz b/derivatives/labels_softseg_bin/sub-tokyoSkyra03/anat/sub-tokyoSkyra03_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz similarity index 100% rename from derivatives/labels_softseg_bin/sub-tokyoSkyra03/anat/sub-tokyoSkyra03_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz rename to 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--git a/derivatives/labels_softseg_bin/sub-ubc04/anat/sub-ubc04_flip-1_mt-on_space-other_MTS_softseg_bin.json b/derivatives/labels_softseg_bin/sub-ubc04/anat/sub-ubc04_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json similarity index 100% rename from derivatives/labels_softseg_bin/sub-ubc04/anat/sub-ubc04_flip-1_mt-on_space-other_MTS_softseg_bin.json rename to derivatives/labels_softseg_bin/sub-ubc04/anat/sub-ubc04_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json diff --git a/derivatives/labels_softseg_bin/sub-ubc04/anat/sub-ubc04_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz b/derivatives/labels_softseg_bin/sub-ubc04/anat/sub-ubc04_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz similarity index 100% rename from derivatives/labels_softseg_bin/sub-ubc04/anat/sub-ubc04_flip-1_mt-on_space-other_MTS_softseg_bin.nii.gz rename to derivatives/labels_softseg_bin/sub-ubc04/anat/sub-ubc04_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz diff 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--git a/derivatives/labels_softseg_bin/sub-unf01/dwi/sub-unf01_rec-average_dwi_softseg_bin.nii.gz b/derivatives/labels_softseg_bin/sub-unf01/dwi/sub-unf01_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz similarity index 100% rename from derivatives/labels_softseg_bin/sub-unf01/dwi/sub-unf01_rec-average_dwi_softseg_bin.nii.gz rename to derivatives/labels_softseg_bin/sub-unf01/dwi/sub-unf01_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-unf02/anat/sub-unf02_flip-1_mt-on_space-other_MTS_softseg_bin.json b/derivatives/labels_softseg_bin/sub-unf02/anat/sub-unf02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json similarity index 100% rename from derivatives/labels_softseg_bin/sub-unf02/anat/sub-unf02_flip-1_mt-on_space-other_MTS_softseg_bin.json rename to derivatives/labels_softseg_bin/sub-unf02/anat/sub-unf02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json diff --git 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--git a/derivatives/labels_softseg_bin/sub-unf02/anat/sub-unf02_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz b/derivatives/labels_softseg_bin/sub-unf02/anat/sub-unf02_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz similarity index 100% rename from derivatives/labels_softseg_bin/sub-unf02/anat/sub-unf02_flip-2_mt-off_space-other_MTS_softseg_bin.nii.gz rename to derivatives/labels_softseg_bin/sub-unf02/anat/sub-unf02_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-unf02/anat/sub-unf02_space-other_T1w_softseg_bin.json b/derivatives/labels_softseg_bin/sub-unf02/anat/sub-unf02_space-other_T1w_desc-softseg_label-SC_seg.json similarity index 100% rename from derivatives/labels_softseg_bin/sub-unf02/anat/sub-unf02_space-other_T1w_softseg_bin.json rename to derivatives/labels_softseg_bin/sub-unf02/anat/sub-unf02_space-other_T1w_desc-softseg_label-SC_seg.json diff --git 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derivatives/labels_softseg_bin/sub-vuiisIngenia06/anat/sub-vuiisIngenia06_space-other_T2w_desc-softseg_label-SC_seg.json diff --git a/derivatives/labels_softseg_bin/sub-vuiisIngenia06/anat/sub-vuiisIngenia06_space-other_T2w_softseg_bin.nii.gz b/derivatives/labels_softseg_bin/sub-vuiisIngenia06/anat/sub-vuiisIngenia06_space-other_T2w_desc-softseg_label-SC_seg.nii.gz similarity index 100% rename from derivatives/labels_softseg_bin/sub-vuiisIngenia06/anat/sub-vuiisIngenia06_space-other_T2w_softseg_bin.nii.gz rename to derivatives/labels_softseg_bin/sub-vuiisIngenia06/anat/sub-vuiisIngenia06_space-other_T2w_desc-softseg_label-SC_seg.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-vuiisIngenia06/dwi/sub-vuiisIngenia06_rec-average_dwi_softseg_bin.json b/derivatives/labels_softseg_bin/sub-vuiisIngenia06/dwi/sub-vuiisIngenia06_rec-average_dwi_desc-softseg_label-SC_seg.json similarity index 100% rename from derivatives/labels_softseg_bin/sub-vuiisIngenia06/dwi/sub-vuiisIngenia06_rec-average_dwi_softseg_bin.json rename to derivatives/labels_softseg_bin/sub-vuiisIngenia06/dwi/sub-vuiisIngenia06_rec-average_dwi_desc-softseg_label-SC_seg.json diff --git a/derivatives/labels_softseg_bin/sub-vuiisIngenia06/dwi/sub-vuiisIngenia06_rec-average_dwi_softseg_bin.nii.gz b/derivatives/labels_softseg_bin/sub-vuiisIngenia06/dwi/sub-vuiisIngenia06_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz similarity index 100% rename from derivatives/labels_softseg_bin/sub-vuiisIngenia06/dwi/sub-vuiisIngenia06_rec-average_dwi_softseg_bin.nii.gz rename to derivatives/labels_softseg_bin/sub-vuiisIngenia06/dwi/sub-vuiisIngenia06_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz From d997192c90f5a809ed1ceda5d6cae5609f099bc2 Mon Sep 17 00:00:00 2001 From: Sandrine Bedard Date: Thu, 15 Feb 2024 16:00:45 -0500 Subject: [PATCH 05/21] add disc labels for MTS, T2star and DWI --- 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b/derivatives/labels/sub-vuiisIngenia05/dwi/sub-vuiisIngenia05_rec-average_dwi_label-discs_desc-warp_dlabel.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s2426--db68801998ce2850236112ca4d0178db261870eea2ba60c0ea2152239a32dff2.nii.gz diff --git a/derivatives/labels/sub-vuiisIngenia06/anat/sub-vuiisIngenia06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-vuiisIngenia06/anat/sub-vuiisIngenia06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz new file mode 100644 index 0000000000..036043b403 --- /dev/null +++ b/derivatives/labels/sub-vuiisIngenia06/anat/sub-vuiisIngenia06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s50619--b9f19f5290cc2f63db5cee8f1fc48e53c660bb6b3c9c1669b334454a9810bf9a.nii.gz diff --git a/derivatives/labels/sub-vuiisIngenia06/anat/sub-vuiisIngenia06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-vuiisIngenia06/anat/sub-vuiisIngenia06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz new file mode 100644 index 0000000000..1bf25aa8d2 --- /dev/null +++ b/derivatives/labels/sub-vuiisIngenia06/anat/sub-vuiisIngenia06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s50634--db40c8d557847c9456ca6c5edeb2e215ad0b2646989e0f8d5fa609f483f67162.nii.gz diff --git a/derivatives/labels/sub-vuiisIngenia06/anat/sub-vuiisIngenia06_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-vuiisIngenia06/anat/sub-vuiisIngenia06_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz new file mode 100644 index 0000000000..8f4a562161 --- /dev/null +++ b/derivatives/labels/sub-vuiisIngenia06/anat/sub-vuiisIngenia06_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s53891--5d5985acd07a6efcdb0838768a4c31b3ace0a55a8fd331d1782cdafb5b35b90b.nii.gz diff --git a/derivatives/labels/sub-vuiisIngenia06/dwi/sub-vuiisIngenia06_rec-average_dwi_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-vuiisIngenia06/dwi/sub-vuiisIngenia06_rec-average_dwi_label-discs_desc-warp_dlabel.nii.gz new file mode 100644 index 0000000000..a930f6c84d --- /dev/null +++ b/derivatives/labels/sub-vuiisIngenia06/dwi/sub-vuiisIngenia06_rec-average_dwi_label-discs_desc-warp_dlabel.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s2422--d7068dfef779df1425ee84824b0620f4d6917dc1663b5c26a6421db47e8b2720.nii.gz From 0cc57bf814a779a56ff37ae969a3c01465080bd3 Mon Sep 17 00:00:00 2001 From: Sandrine Bedard Date: Fri, 16 Feb 2024 17:28:49 -0500 Subject: [PATCH 06/21] modify/add json file with space other --- code/update_json.py | 105 ++++++++++++ ...ub-amu01_flip-1_mt-on_space-other_MTS.json | 132 ++++++++------- ...b-amu01_flip-2_mt-off_space-other_MTS.json | 130 ++++++++------- .../anat/sub-amu01_space-other_T1w.json | 136 ++++++++-------- .../anat/sub-amu01_space-other_T2star.json | 6 +- .../anat/sub-amu01_space-other_T2w.json | 136 ++++++++-------- ...ub-amu02_flip-1_mt-on_space-other_MTS.json | 132 ++++++++------- ...b-amu02_flip-2_mt-off_space-other_MTS.json | 130 ++++++++------- .../anat/sub-amu02_space-other_T1w.json | 136 ++++++++-------- .../anat/sub-amu02_space-other_T2star.json | 6 +- .../anat/sub-amu02_space-other_T2w.json | 136 ++++++++-------- ...ub-amu03_flip-1_mt-on_space-other_MTS.json | 132 ++++++++------- ...b-amu03_flip-2_mt-off_space-other_MTS.json | 130 ++++++++------- .../anat/sub-amu03_space-other_T1w.json | 136 ++++++++-------- .../anat/sub-amu03_space-other_T2star.json | 6 +- .../anat/sub-amu03_space-other_T2w.json | 136 ++++++++-------- ...ub-amu04_flip-1_mt-on_space-other_MTS.json | 132 ++++++++------- ...b-amu04_flip-2_mt-off_space-other_MTS.json | 130 ++++++++------- .../anat/sub-amu04_space-other_T1w.json | 136 ++++++++-------- .../anat/sub-amu04_space-other_T2star.json | 6 +- .../anat/sub-amu04_space-other_T2w.json | 136 ++++++++-------- ...ub-amu05_flip-1_mt-on_space-other_MTS.json | 132 ++++++++------- ...b-amu05_flip-2_mt-off_space-other_MTS.json | 130 ++++++++------- .../anat/sub-amu05_space-other_T1w.json | 136 ++++++++-------- .../anat/sub-amu05_space-other_T2star.json | 6 +- .../anat/sub-amu05_space-other_T2w.json | 136 ++++++++-------- ...lgrist01_flip-1_mt-on_space-other_MTS.json | 138 ++++++++-------- ...grist01_flip-2_mt-off_space-other_MTS.json | 136 ++++++++-------- .../anat/sub-balgrist01_space-other_T1w.json | 143 +++++++++-------- .../sub-balgrist01_space-other_T2star.json | 6 +- .../anat/sub-balgrist01_space-other_T2w.json | 145 +++++++++-------- ...lgrist02_flip-1_mt-on_space-other_MTS.json | 138 ++++++++-------- ...grist02_flip-2_mt-off_space-other_MTS.json | 136 ++++++++-------- .../anat/sub-balgrist02_space-other_T1w.json | 143 +++++++++-------- .../sub-balgrist02_space-other_T2star.json | 6 +- .../anat/sub-balgrist02_space-other_T2w.json | 145 +++++++++-------- ...lgrist03_flip-1_mt-on_space-other_MTS.json | 138 ++++++++-------- ...grist03_flip-2_mt-off_space-other_MTS.json | 136 ++++++++-------- .../anat/sub-balgrist03_space-other_T1w.json | 143 +++++++++-------- .../sub-balgrist03_space-other_T2star.json | 6 +- .../anat/sub-balgrist03_space-other_T2w.json | 145 +++++++++-------- ...lgrist04_flip-1_mt-on_space-other_MTS.json | 138 ++++++++-------- ...grist04_flip-2_mt-off_space-other_MTS.json | 136 ++++++++-------- .../anat/sub-balgrist04_space-other_T1w.json | 143 +++++++++-------- .../sub-balgrist04_space-other_T2star.json | 6 +- .../anat/sub-balgrist04_space-other_T2w.json | 145 +++++++++-------- ...lgrist05_flip-1_mt-on_space-other_MTS.json | 138 ++++++++-------- ...grist05_flip-2_mt-off_space-other_MTS.json | 136 ++++++++-------- .../anat/sub-balgrist05_space-other_T1w.json | 143 +++++++++-------- .../sub-balgrist05_space-other_T2star.json | 6 +- .../anat/sub-balgrist05_space-other_T2w.json | 145 +++++++++-------- ...lgrist06_flip-1_mt-on_space-other_MTS.json | 138 ++++++++-------- ...grist06_flip-2_mt-off_space-other_MTS.json | 136 ++++++++-------- .../anat/sub-balgrist06_space-other_T1w.json | 143 +++++++++-------- .../sub-balgrist06_space-other_T2star.json | 6 +- .../anat/sub-balgrist06_space-other_T2w.json | 145 +++++++++-------- ...celona01_flip-1_mt-on_space-other_MTS.json | 138 ++++++++-------- ...elona01_flip-2_mt-off_space-other_MTS.json | 136 ++++++++-------- .../anat/sub-barcelona01_space-other_T1w.json | 143 +++++++++-------- .../sub-barcelona01_space-other_T2star.json | 6 +- .../anat/sub-barcelona01_space-other_T2w.json | 145 +++++++++-------- ...celona02_flip-1_mt-on_space-other_MTS.json | 138 ++++++++-------- ...elona02_flip-2_mt-off_space-other_MTS.json | 136 ++++++++-------- .../anat/sub-barcelona02_space-other_T1w.json | 143 +++++++++-------- .../sub-barcelona02_space-other_T2star.json | 6 +- .../anat/sub-barcelona02_space-other_T2w.json | 145 +++++++++-------- ...celona03_flip-1_mt-on_space-other_MTS.json | 138 ++++++++-------- ...elona03_flip-2_mt-off_space-other_MTS.json | 136 ++++++++-------- .../anat/sub-barcelona03_space-other_T1w.json | 143 +++++++++-------- .../sub-barcelona03_space-other_T2star.json | 6 +- .../anat/sub-barcelona03_space-other_T2w.json | 145 +++++++++-------- ...celona04_flip-1_mt-on_space-other_MTS.json | 138 ++++++++-------- ...elona04_flip-2_mt-off_space-other_MTS.json | 136 ++++++++-------- .../anat/sub-barcelona04_space-other_T1w.json | 143 +++++++++-------- .../sub-barcelona04_space-other_T2star.json | 6 +- .../anat/sub-barcelona04_space-other_T2w.json | 145 +++++++++-------- ...celona05_flip-1_mt-on_space-other_MTS.json | 138 ++++++++-------- ...elona05_flip-2_mt-off_space-other_MTS.json | 136 ++++++++-------- .../anat/sub-barcelona05_space-other_T1w.json | 143 +++++++++-------- .../sub-barcelona05_space-other_T2star.json | 6 +- .../anat/sub-barcelona05_space-other_T2w.json | 145 +++++++++-------- ...celona06_flip-1_mt-on_space-other_MTS.json | 138 ++++++++-------- ...elona06_flip-2_mt-off_space-other_MTS.json | 136 ++++++++-------- .../anat/sub-barcelona06_space-other_T1w.json | 143 +++++++++-------- .../sub-barcelona06_space-other_T2star.json | 6 +- .../anat/sub-barcelona06_space-other_T2w.json | 145 +++++++++-------- .../anat/sub-beijingGE01_space-other_T1w.json | 92 ++++++----- .../sub-beijingGE01_space-other_T2star.json | 6 +- .../anat/sub-beijingGE01_space-other_T2w.json | 92 ++++++----- .../anat/sub-beijingGE02_space-other_T1w.json | 92 ++++++----- .../sub-beijingGE02_space-other_T2star.json | 6 +- .../anat/sub-beijingGE02_space-other_T2w.json | 92 ++++++----- .../anat/sub-beijingGE03_space-other_T1w.json | 92 ++++++----- .../sub-beijingGE03_space-other_T2star.json | 6 +- .../anat/sub-beijingGE03_space-other_T2w.json | 92 ++++++----- .../anat/sub-beijingGE04_space-other_T1w.json | 92 ++++++----- .../sub-beijingGE04_space-other_T2star.json | 6 +- .../anat/sub-beijingGE04_space-other_T2w.json | 92 ++++++----- ...Prisma01_flip-1_mt-on_space-other_MTS.json | 139 ++++++++-------- ...risma01_flip-2_mt-off_space-other_MTS.json | 137 ++++++++-------- .../sub-beijingPrisma01_space-other_T1w.json | 144 +++++++++-------- ...ub-beijingPrisma01_space-other_T2star.json | 6 +- .../sub-beijingPrisma01_space-other_T2w.json | 148 ++++++++--------- ...Prisma02_flip-1_mt-on_space-other_MTS.json | 141 ++++++++-------- ...risma02_flip-2_mt-off_space-other_MTS.json | 139 ++++++++-------- .../sub-beijingPrisma02_space-other_T1w.json | 146 ++++++++--------- ...ub-beijingPrisma02_space-other_T2star.json | 6 +- .../sub-beijingPrisma02_space-other_T2w.json | 150 +++++++++--------- ...Prisma03_flip-1_mt-on_space-other_MTS.json | 141 ++++++++-------- ...risma03_flip-2_mt-off_space-other_MTS.json | 139 ++++++++-------- .../sub-beijingPrisma03_space-other_T1w.json | 146 ++++++++--------- ...ub-beijingPrisma03_space-other_T2star.json | 6 +- .../sub-beijingPrisma03_space-other_T2w.json | 150 +++++++++--------- ...Prisma04_flip-1_mt-on_space-other_MTS.json | 141 ++++++++-------- ...risma04_flip-2_mt-off_space-other_MTS.json | 139 ++++++++-------- .../sub-beijingPrisma04_space-other_T1w.json | 146 ++++++++--------- ...ub-beijingPrisma04_space-other_T2star.json | 6 +- .../sub-beijingPrisma04_space-other_T2w.json | 150 +++++++++--------- ...Prisma05_flip-1_mt-on_space-other_MTS.json | 141 ++++++++-------- ...risma05_flip-2_mt-off_space-other_MTS.json | 139 ++++++++-------- .../sub-beijingPrisma05_space-other_T1w.json | 146 ++++++++--------- ...ub-beijingPrisma05_space-other_T2star.json | 6 +- .../sub-beijingPrisma05_space-other_T2w.json | 150 +++++++++--------- .../sub-beijingVerio01_space-other_T1w.json | 138 ++++++++-------- ...sub-beijingVerio01_space-other_T2star.json | 6 +- .../sub-beijingVerio01_space-other_T2w.json | 140 ++++++++-------- .../sub-beijingVerio02_space-other_T1w.json | 138 ++++++++-------- ...sub-beijingVerio02_space-other_T2star.json | 6 +- .../sub-beijingVerio02_space-other_T2w.json | 140 ++++++++-------- .../sub-beijingVerio03_space-other_T1w.json | 138 ++++++++-------- ...sub-beijingVerio03_space-other_T2star.json | 6 +- .../sub-beijingVerio03_space-other_T2w.json | 140 ++++++++-------- .../sub-beijingVerio04_space-other_T1w.json | 138 ++++++++-------- ...sub-beijingVerio04_space-other_T2star.json | 6 +- .../sub-beijingVerio04_space-other_T2w.json | 140 ++++++++-------- ...Ceitec01_flip-1_mt-on_space-other_MTS.json | 138 ++++++++-------- ...eitec01_flip-2_mt-off_space-other_MTS.json | 136 ++++++++-------- .../sub-brnoCeitec01_space-other_T1w.json | 143 +++++++++-------- .../sub-brnoCeitec01_space-other_T2star.json | 6 +- .../sub-brnoCeitec01_space-other_T2w.json | 145 +++++++++-------- ...Ceitec02_flip-1_mt-on_space-other_MTS.json | 138 ++++++++-------- ...eitec02_flip-2_mt-off_space-other_MTS.json | 136 ++++++++-------- .../sub-brnoCeitec02_space-other_T1w.json | 143 +++++++++-------- .../sub-brnoCeitec02_space-other_T2star.json | 6 +- .../sub-brnoCeitec02_space-other_T2w.json | 145 +++++++++-------- ...Ceitec03_flip-1_mt-on_space-other_MTS.json | 138 ++++++++-------- ...eitec03_flip-2_mt-off_space-other_MTS.json | 136 ++++++++-------- .../sub-brnoCeitec03_space-other_T1w.json | 143 +++++++++-------- .../sub-brnoCeitec03_space-other_T2star.json | 6 +- .../sub-brnoCeitec03_space-other_T2w.json | 145 +++++++++-------- ...Ceitec04_flip-1_mt-on_space-other_MTS.json | 138 ++++++++-------- ...eitec04_flip-2_mt-off_space-other_MTS.json | 136 ++++++++-------- .../sub-brnoCeitec04_space-other_T1w.json | 143 +++++++++-------- .../sub-brnoCeitec04_space-other_T2star.json | 6 +- .../sub-brnoCeitec04_space-other_T2w.json | 145 +++++++++-------- ...Ceitec05_flip-1_mt-on_space-other_MTS.json | 138 ++++++++-------- ...eitec05_flip-2_mt-off_space-other_MTS.json | 136 ++++++++-------- .../sub-brnoCeitec05_space-other_T1w.json | 143 +++++++++-------- .../sub-brnoCeitec05_space-other_T2star.json | 6 +- .../sub-brnoCeitec05_space-other_T2w.json | 145 +++++++++-------- ...Ceitec06_flip-1_mt-on_space-other_MTS.json | 138 ++++++++-------- ...eitec06_flip-2_mt-off_space-other_MTS.json | 136 ++++++++-------- .../sub-brnoCeitec06_space-other_T1w.json | 143 +++++++++-------- .../sub-brnoCeitec06_space-other_T2star.json | 6 +- .../sub-brnoCeitec06_space-other_T2w.json | 145 +++++++++-------- ...rnoUhb01_flip-1_mt-on_space-other_MTS.json | 88 +++++----- ...noUhb01_flip-2_mt-off_space-other_MTS.json | 88 +++++----- .../anat/sub-brnoUhb01_space-other_T1w.json | 91 ++++++----- .../sub-brnoUhb01_space-other_T2star.json | 6 +- .../anat/sub-brnoUhb01_space-other_T2w.json | 91 ++++++----- ...rnoUhb02_flip-1_mt-on_space-other_MTS.json | 88 +++++----- ...noUhb02_flip-2_mt-off_space-other_MTS.json | 88 +++++----- .../anat/sub-brnoUhb02_space-other_T1w.json | 91 ++++++----- .../sub-brnoUhb02_space-other_T2star.json | 6 +- .../anat/sub-brnoUhb02_space-other_T2w.json | 91 ++++++----- ...rnoUhb03_flip-1_mt-on_space-other_MTS.json | 88 +++++----- ...noUhb03_flip-2_mt-off_space-other_MTS.json | 88 +++++----- .../anat/sub-brnoUhb03_space-other_T1w.json | 91 ++++++----- .../sub-brnoUhb03_space-other_T2star.json | 6 +- .../anat/sub-brnoUhb03_space-other_T2w.json | 91 ++++++----- ...rnoUhb04_flip-1_mt-on_space-other_MTS.json | 88 +++++----- ...noUhb04_flip-2_mt-off_space-other_MTS.json | 88 +++++----- .../anat/sub-brnoUhb04_space-other_T1w.json | 91 ++++++----- .../sub-brnoUhb04_space-other_T2star.json | 6 +- .../anat/sub-brnoUhb04_space-other_T2w.json | 91 ++++++----- ...rnoUhb05_flip-1_mt-on_space-other_MTS.json | 88 +++++----- ...noUhb05_flip-2_mt-off_space-other_MTS.json | 88 +++++----- .../anat/sub-brnoUhb05_space-other_T1w.json | 91 ++++++----- .../sub-brnoUhb05_space-other_T2star.json | 6 +- .../anat/sub-brnoUhb05_space-other_T2w.json | 91 ++++++----- ...rnoUhb06_flip-1_mt-on_space-other_MTS.json | 88 +++++----- ...noUhb06_flip-2_mt-off_space-other_MTS.json | 88 +++++----- .../anat/sub-brnoUhb06_space-other_T1w.json | 91 ++++++----- .../sub-brnoUhb06_space-other_T2star.json | 6 +- .../anat/sub-brnoUhb06_space-other_T2w.json | 91 ++++++----- ...rnoUhb07_flip-1_mt-on_space-other_MTS.json | 88 +++++----- ...noUhb07_flip-2_mt-off_space-other_MTS.json | 88 +++++----- .../anat/sub-brnoUhb07_space-other_T1w.json | 91 ++++++----- .../sub-brnoUhb07_space-other_T2star.json | 6 +- .../anat/sub-brnoUhb07_space-other_T2w.json | 91 ++++++----- ...rnoUhb08_flip-1_mt-on_space-other_MTS.json | 88 +++++----- ...noUhb08_flip-2_mt-off_space-other_MTS.json | 88 +++++----- .../anat/sub-brnoUhb08_space-other_T1w.json | 91 ++++++----- .../sub-brnoUhb08_space-other_T2star.json | 6 +- .../anat/sub-brnoUhb08_space-other_T2w.json | 91 ++++++----- ...ardiff01_flip-1_mt-on_space-other_MTS.json | 135 ++++++++-------- ...rdiff01_flip-2_mt-off_space-other_MTS.json | 133 ++++++++-------- .../anat/sub-cardiff01_space-other_T1w.json | 142 +++++++++-------- .../sub-cardiff01_space-other_T2star.json | 6 +- .../anat/sub-cardiff01_space-other_T2w.json | 144 +++++++++-------- ...ardiff02_flip-1_mt-on_space-other_MTS.json | 135 ++++++++-------- ...rdiff02_flip-2_mt-off_space-other_MTS.json | 133 ++++++++-------- .../anat/sub-cardiff02_space-other_T1w.json | 142 +++++++++-------- .../sub-cardiff02_space-other_T2star.json | 6 +- .../anat/sub-cardiff02_space-other_T2w.json | 144 +++++++++-------- ...ardiff03_flip-1_mt-on_space-other_MTS.json | 135 ++++++++-------- ...rdiff03_flip-2_mt-off_space-other_MTS.json | 133 ++++++++-------- .../anat/sub-cardiff03_space-other_T1w.json | 142 +++++++++-------- .../sub-cardiff03_space-other_T2star.json | 6 +- .../anat/sub-cardiff03_space-other_T2w.json | 144 +++++++++-------- ...ardiff04_flip-1_mt-on_space-other_MTS.json | 135 ++++++++-------- ...rdiff04_flip-2_mt-off_space-other_MTS.json | 133 ++++++++-------- .../anat/sub-cardiff04_space-other_T1w.json | 142 +++++++++-------- .../sub-cardiff04_space-other_T2star.json | 6 +- .../anat/sub-cardiff04_space-other_T2w.json | 144 +++++++++-------- ...ardiff05_flip-1_mt-on_space-other_MTS.json | 135 ++++++++-------- ...rdiff05_flip-2_mt-off_space-other_MTS.json | 133 ++++++++-------- .../anat/sub-cardiff05_space-other_T1w.json | 142 +++++++++-------- .../sub-cardiff05_space-other_T2star.json | 6 +- .../anat/sub-cardiff05_space-other_T2w.json | 144 +++++++++-------- ...ardiff06_flip-1_mt-on_space-other_MTS.json | 135 ++++++++-------- ...rdiff06_flip-2_mt-off_space-other_MTS.json | 133 ++++++++-------- .../anat/sub-cardiff06_space-other_T1w.json | 142 +++++++++-------- .../sub-cardiff06_space-other_T2star.json | 6 +- .../anat/sub-cardiff06_space-other_T2w.json | 144 +++++++++-------- ...-cmrra01_flip-1_mt-on_space-other_MTS.json | 137 ++++++++-------- ...cmrra01_flip-2_mt-off_space-other_MTS.json | 135 ++++++++-------- .../anat/sub-cmrra01_space-other_T1w.json | 144 +++++++++-------- .../anat/sub-cmrra01_space-other_T2star.json | 6 +- .../anat/sub-cmrra01_space-other_T2w.json | 148 ++++++++--------- ...-cmrra02_flip-1_mt-on_space-other_MTS.json | 137 ++++++++-------- ...cmrra02_flip-2_mt-off_space-other_MTS.json | 135 ++++++++-------- .../anat/sub-cmrra02_space-other_T1w.json | 144 +++++++++-------- .../anat/sub-cmrra02_space-other_T2star.json | 6 +- .../anat/sub-cmrra02_space-other_T2w.json | 148 ++++++++--------- ...-cmrra03_flip-1_mt-on_space-other_MTS.json | 137 ++++++++-------- ...cmrra03_flip-2_mt-off_space-other_MTS.json | 135 ++++++++-------- .../anat/sub-cmrra03_space-other_T1w.json | 144 +++++++++-------- .../anat/sub-cmrra03_space-other_T2star.json | 6 +- .../anat/sub-cmrra03_space-other_T2w.json | 148 ++++++++--------- ...-cmrra04_flip-1_mt-on_space-other_MTS.json | 137 ++++++++-------- ...cmrra04_flip-2_mt-off_space-other_MTS.json | 135 ++++++++-------- .../anat/sub-cmrra04_space-other_T1w.json | 144 +++++++++-------- .../anat/sub-cmrra04_space-other_T2star.json | 6 +- .../anat/sub-cmrra04_space-other_T2w.json | 148 ++++++++--------- ...-cmrra05_flip-1_mt-on_space-other_MTS.json | 137 ++++++++-------- ...cmrra05_flip-2_mt-off_space-other_MTS.json | 135 ++++++++-------- .../anat/sub-cmrra05_space-other_T1w.json | 144 +++++++++-------- .../anat/sub-cmrra05_space-other_T2star.json | 6 +- .../anat/sub-cmrra05_space-other_T2w.json | 148 ++++++++--------- ...-cmrra06_flip-1_mt-on_space-other_MTS.json | 137 ++++++++-------- ...cmrra06_flip-2_mt-off_space-other_MTS.json | 135 ++++++++-------- .../anat/sub-cmrra06_space-other_T1w.json | 144 +++++++++-------- .../anat/sub-cmrra06_space-other_T2star.json | 6 +- .../anat/sub-cmrra06_space-other_T2w.json | 148 ++++++++--------- ...-cmrrb01_flip-1_mt-on_space-other_MTS.json | 137 ++++++++-------- ...cmrrb01_flip-2_mt-off_space-other_MTS.json | 135 ++++++++-------- .../anat/sub-cmrrb01_space-other_T1w.json | 144 +++++++++-------- .../anat/sub-cmrrb01_space-other_T2star.json | 6 +- .../anat/sub-cmrrb01_space-other_T2w.json | 148 ++++++++--------- ...-cmrrb02_flip-1_mt-on_space-other_MTS.json | 137 ++++++++-------- ...cmrrb02_flip-2_mt-off_space-other_MTS.json | 135 ++++++++-------- .../anat/sub-cmrrb02_space-other_T1w.json | 144 +++++++++-------- .../anat/sub-cmrrb02_space-other_T2star.json | 6 +- .../anat/sub-cmrrb02_space-other_T2w.json | 148 ++++++++--------- ...-cmrrb03_flip-1_mt-on_space-other_MTS.json | 137 ++++++++-------- ...cmrrb03_flip-2_mt-off_space-other_MTS.json | 135 ++++++++-------- .../anat/sub-cmrrb03_space-other_T1w.json | 144 +++++++++-------- .../anat/sub-cmrrb03_space-other_T2star.json | 6 +- .../anat/sub-cmrrb03_space-other_T2w.json | 148 ++++++++--------- ...-cmrrb04_flip-1_mt-on_space-other_MTS.json | 137 ++++++++-------- ...cmrrb04_flip-2_mt-off_space-other_MTS.json | 135 ++++++++-------- .../anat/sub-cmrrb04_space-other_T1w.json | 144 +++++++++-------- .../anat/sub-cmrrb04_space-other_T2star.json | 6 +- .../anat/sub-cmrrb04_space-other_T2w.json | 148 ++++++++--------- ...-cmrrb05_flip-1_mt-on_space-other_MTS.json | 137 ++++++++-------- ...cmrrb05_flip-2_mt-off_space-other_MTS.json | 135 ++++++++-------- .../anat/sub-cmrrb05_space-other_T1w.json | 144 +++++++++-------- .../anat/sub-cmrrb05_space-other_T2star.json | 6 +- .../anat/sub-cmrrb05_space-other_T2w.json | 148 ++++++++--------- ...-cmrrb06_flip-1_mt-on_space-other_MTS.json | 137 ++++++++-------- ...cmrrb06_flip-2_mt-off_space-other_MTS.json | 135 ++++++++-------- .../anat/sub-cmrrb06_space-other_T1w.json | 144 +++++++++-------- .../anat/sub-cmrrb06_space-other_T2star.json | 6 +- .../anat/sub-cmrrb06_space-other_T2w.json | 148 ++++++++--------- ...-cmrrb07_flip-1_mt-on_space-other_MTS.json | 137 ++++++++-------- ...cmrrb07_flip-2_mt-off_space-other_MTS.json | 135 ++++++++-------- .../anat/sub-cmrrb07_space-other_T1w.json | 144 +++++++++-------- .../anat/sub-cmrrb07_space-other_T2star.json | 6 +- .../anat/sub-cmrrb07_space-other_T2w.json | 148 ++++++++--------- ...resden01_flip-1_mt-on_space-other_MTS.json | 137 ++++++++-------- ...esden01_flip-2_mt-off_space-other_MTS.json | 135 ++++++++-------- .../anat/sub-dresden01_space-other_T1w.json | 147 +++++++++-------- .../sub-dresden01_space-other_T2star.json | 6 +- .../anat/sub-dresden01_space-other_T2w.json | 150 +++++++++--------- ...resden02_flip-1_mt-on_space-other_MTS.json | 137 ++++++++-------- ...esden02_flip-2_mt-off_space-other_MTS.json | 135 ++++++++-------- .../anat/sub-dresden02_space-other_T1w.json | 149 +++++++++-------- .../sub-dresden02_space-other_T2star.json | 6 +- .../anat/sub-dresden02_space-other_T2w.json | 148 ++++++++--------- ...chieva01_flip-1_mt-on_space-other_MTS.json | 115 +++++++------- ...hieva01_flip-2_mt-off_space-other_MTS.json | 115 +++++++------- .../sub-fslAchieva01_space-other_T1w.json | 118 +++++++------- .../sub-fslAchieva01_space-other_T2star.json | 6 +- .../sub-fslAchieva01_space-other_T2w.json | 118 +++++++------- ...chieva02_flip-1_mt-on_space-other_MTS.json | 115 +++++++------- ...hieva02_flip-2_mt-off_space-other_MTS.json | 115 +++++++------- .../sub-fslAchieva02_space-other_T1w.json | 118 +++++++------- .../sub-fslAchieva02_space-other_T2star.json | 6 +- .../sub-fslAchieva02_space-other_T2w.json | 118 +++++++------- ...chieva03_flip-1_mt-on_space-other_MTS.json | 115 +++++++------- ...hieva03_flip-2_mt-off_space-other_MTS.json | 115 +++++++------- .../sub-fslAchieva03_space-other_T1w.json | 118 +++++++------- .../sub-fslAchieva03_space-other_T2star.json | 6 +- .../sub-fslAchieva03_space-other_T2w.json | 118 +++++++------- ...chieva04_flip-1_mt-on_space-other_MTS.json | 115 +++++++------- ...hieva04_flip-2_mt-off_space-other_MTS.json | 115 +++++++------- .../sub-fslAchieva04_space-other_T1w.json | 118 +++++++------- .../sub-fslAchieva04_space-other_T2star.json | 6 +- .../sub-fslAchieva04_space-other_T2w.json | 118 +++++++------- ...chieva05_flip-1_mt-on_space-other_MTS.json | 115 +++++++------- ...hieva05_flip-2_mt-off_space-other_MTS.json | 115 +++++++------- .../sub-fslAchieva05_space-other_T1w.json | 118 +++++++------- .../sub-fslAchieva05_space-other_T2star.json | 6 +- .../sub-fslAchieva05_space-other_T2w.json | 118 +++++++------- ...chieva06_flip-1_mt-on_space-other_MTS.json | 115 +++++++------- ...hieva06_flip-2_mt-off_space-other_MTS.json | 115 +++++++------- .../sub-fslAchieva06_space-other_T1w.json | 118 +++++++------- .../sub-fslAchieva06_space-other_T2star.json | 6 +- .../sub-fslAchieva06_space-other_T2w.json | 118 +++++++------- ...Prisma01_flip-1_mt-on_space-other_MTS.json | 5 +- ...risma01_flip-2_mt-off_space-other_MTS.json | 5 +- .../anat/sub-fslPrisma01_space-other_T1w.json | 6 +- .../sub-fslPrisma01_space-other_T2star.json | 6 +- .../anat/sub-fslPrisma01_space-other_T2w.json | 6 +- ...Prisma02_flip-1_mt-on_space-other_MTS.json | 5 +- ...risma02_flip-2_mt-off_space-other_MTS.json | 5 +- .../anat/sub-fslPrisma02_space-other_T1w.json | 6 +- .../sub-fslPrisma02_space-other_T2star.json | 6 +- .../anat/sub-fslPrisma02_space-other_T2w.json | 6 +- ...Prisma03_flip-1_mt-on_space-other_MTS.json | 5 +- ...risma03_flip-2_mt-off_space-other_MTS.json | 5 +- .../anat/sub-fslPrisma03_space-other_T1w.json | 6 +- .../sub-fslPrisma03_space-other_T2star.json | 6 +- .../anat/sub-fslPrisma03_space-other_T2w.json | 6 +- ...Prisma04_flip-1_mt-on_space-other_MTS.json | 5 +- ...risma04_flip-2_mt-off_space-other_MTS.json | 5 +- .../anat/sub-fslPrisma04_space-other_T1w.json | 6 +- .../sub-fslPrisma04_space-other_T2star.json | 6 +- .../anat/sub-fslPrisma04_space-other_T2w.json | 6 +- ...Prisma05_flip-1_mt-on_space-other_MTS.json | 5 +- ...risma05_flip-2_mt-off_space-other_MTS.json | 5 +- .../anat/sub-fslPrisma05_space-other_T1w.json | 6 +- .../sub-fslPrisma05_space-other_T2star.json | 6 +- .../anat/sub-fslPrisma05_space-other_T2w.json | 6 +- ...Prisma06_flip-1_mt-on_space-other_MTS.json | 5 +- ...risma06_flip-2_mt-off_space-other_MTS.json | 5 +- .../anat/sub-fslPrisma06_space-other_T1w.json | 6 +- .../sub-fslPrisma06_space-other_T2star.json | 6 +- .../anat/sub-fslPrisma06_space-other_T2w.json | 6 +- ...geneva01_flip-1_mt-on_space-other_MTS.json | 140 ++++++++-------- ...eneva01_flip-2_mt-off_space-other_MTS.json | 138 ++++++++-------- .../anat/sub-geneva01_space-other_T1w.json | 145 +++++++++-------- .../anat/sub-geneva01_space-other_T2star.json | 6 +- .../anat/sub-geneva01_space-other_T2w.json | 147 +++++++++-------- ...geneva02_flip-1_mt-on_space-other_MTS.json | 140 ++++++++-------- ...eneva02_flip-2_mt-off_space-other_MTS.json | 138 ++++++++-------- .../anat/sub-geneva02_space-other_T1w.json | 145 +++++++++-------- .../anat/sub-geneva02_space-other_T2star.json | 6 +- .../anat/sub-geneva02_space-other_T2w.json | 147 +++++++++-------- ...geneva03_flip-1_mt-on_space-other_MTS.json | 140 ++++++++-------- ...eneva03_flip-2_mt-off_space-other_MTS.json | 138 ++++++++-------- .../anat/sub-geneva03_space-other_T1w.json | 145 +++++++++-------- .../anat/sub-geneva03_space-other_T2star.json | 6 +- .../anat/sub-geneva03_space-other_T2w.json | 147 +++++++++-------- ...geneva04_flip-1_mt-on_space-other_MTS.json | 140 ++++++++-------- ...eneva04_flip-2_mt-off_space-other_MTS.json | 138 ++++++++-------- .../anat/sub-geneva04_space-other_T1w.json | 145 +++++++++-------- .../anat/sub-geneva04_space-other_T2star.json | 6 +- .../anat/sub-geneva04_space-other_T2w.json | 147 +++++++++-------- ...geneva05_flip-1_mt-on_space-other_MTS.json | 140 ++++++++-------- ...eneva05_flip-2_mt-off_space-other_MTS.json | 138 ++++++++-------- .../anat/sub-geneva05_space-other_T1w.json | 145 +++++++++-------- .../anat/sub-geneva05_space-other_T2star.json | 6 +- .../anat/sub-geneva05_space-other_T2w.json | 147 +++++++++-------- ...geneva06_flip-1_mt-on_space-other_MTS.json | 140 ++++++++-------- ...eneva06_flip-2_mt-off_space-other_MTS.json | 138 ++++++++-------- .../anat/sub-geneva06_space-other_T1w.json | 145 +++++++++-------- .../anat/sub-geneva06_space-other_T2star.json | 6 +- .../anat/sub-geneva06_space-other_T2w.json | 147 +++++++++-------- ...amburg01_flip-1_mt-on_space-other_MTS.json | 140 ++++++++-------- ...mburg01_flip-2_mt-off_space-other_MTS.json | 138 ++++++++-------- .../anat/sub-hamburg01_space-other_T1w.json | 145 +++++++++-------- .../sub-hamburg01_space-other_T2star.json | 6 +- .../anat/sub-hamburg01_space-other_T2w.json | 147 +++++++++-------- ...amburg02_flip-1_mt-on_space-other_MTS.json | 140 ++++++++-------- ...mburg02_flip-2_mt-off_space-other_MTS.json | 138 ++++++++-------- .../anat/sub-hamburg02_space-other_T1w.json | 145 +++++++++-------- .../sub-hamburg02_space-other_T2star.json | 6 +- .../anat/sub-hamburg02_space-other_T2w.json | 147 +++++++++-------- ...amburg03_flip-1_mt-on_space-other_MTS.json | 140 ++++++++-------- ...mburg03_flip-2_mt-off_space-other_MTS.json | 138 ++++++++-------- .../anat/sub-hamburg03_space-other_T1w.json | 145 +++++++++-------- .../sub-hamburg03_space-other_T2star.json | 6 +- .../anat/sub-hamburg03_space-other_T2w.json | 147 +++++++++-------- ...amburg04_flip-1_mt-on_space-other_MTS.json | 140 ++++++++-------- ...mburg04_flip-2_mt-off_space-other_MTS.json | 138 ++++++++-------- .../anat/sub-hamburg04_space-other_T1w.json | 145 +++++++++-------- .../sub-hamburg04_space-other_T2star.json | 6 +- .../anat/sub-hamburg04_space-other_T2w.json | 147 +++++++++-------- ...amburg05_flip-1_mt-on_space-other_MTS.json | 140 ++++++++-------- ...mburg05_flip-2_mt-off_space-other_MTS.json | 138 ++++++++-------- .../anat/sub-hamburg05_space-other_T1w.json | 145 +++++++++-------- .../sub-hamburg05_space-other_T2star.json | 6 +- .../anat/sub-hamburg05_space-other_T2w.json | 147 +++++++++-------- ...amburg06_flip-1_mt-on_space-other_MTS.json | 140 ++++++++-------- ...mburg06_flip-2_mt-off_space-other_MTS.json | 138 ++++++++-------- .../anat/sub-hamburg06_space-other_T1w.json | 145 +++++++++-------- .../sub-hamburg06_space-other_T2star.json | 6 +- .../anat/sub-hamburg06_space-other_T2w.json | 147 +++++++++-------- ...do750w01_flip-1_mt-on_space-other_MTS.json | 90 ++++++----- ...o750w01_flip-2_mt-off_space-other_MTS.json | 90 ++++++----- .../sub-juntendo750w01_space-other_T1w.json | 93 ++++++----- ...sub-juntendo750w01_space-other_T2star.json | 6 +- .../sub-juntendo750w01_space-other_T2w.json | 93 ++++++----- ...do750w02_flip-1_mt-on_space-other_MTS.json | 90 ++++++----- ...o750w02_flip-2_mt-off_space-other_MTS.json | 90 ++++++----- .../sub-juntendo750w02_space-other_T1w.json | 93 ++++++----- ...sub-juntendo750w02_space-other_T2star.json | 6 +- .../sub-juntendo750w02_space-other_T2w.json | 93 ++++++----- ...do750w03_flip-1_mt-on_space-other_MTS.json | 90 ++++++----- 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.../sub-juntendo750w06_space-other_T1w.json | 93 ++++++----- ...sub-juntendo750w06_space-other_T2star.json | 6 +- .../sub-juntendo750w06_space-other_T2w.json | 93 ++++++----- ...ub-mgh01_flip-1_mt-on_space-other_MTS.json | 140 ++++++++-------- ...b-mgh01_flip-2_mt-off_space-other_MTS.json | 138 ++++++++-------- .../anat/sub-mgh01_space-other_T1w.json | 145 +++++++++-------- .../anat/sub-mgh01_space-other_T2star.json | 6 +- .../anat/sub-mgh01_space-other_T2w.json | 147 +++++++++-------- ...ub-mgh02_flip-1_mt-on_space-other_MTS.json | 140 ++++++++-------- ...b-mgh02_flip-2_mt-off_space-other_MTS.json | 138 ++++++++-------- .../anat/sub-mgh02_space-other_T1w.json | 145 +++++++++-------- .../anat/sub-mgh02_space-other_T2star.json | 6 +- .../anat/sub-mgh02_space-other_T2w.json | 147 +++++++++-------- ...ub-mgh03_flip-1_mt-on_space-other_MTS.json | 140 ++++++++-------- ...b-mgh03_flip-2_mt-off_space-other_MTS.json | 138 ++++++++-------- .../anat/sub-mgh03_space-other_T1w.json | 145 +++++++++-------- .../anat/sub-mgh03_space-other_T2star.json | 6 +- .../anat/sub-mgh03_space-other_T2w.json | 147 +++++++++-------- ...ub-mgh04_flip-1_mt-on_space-other_MTS.json | 140 ++++++++-------- ...b-mgh04_flip-2_mt-off_space-other_MTS.json | 138 ++++++++-------- .../anat/sub-mgh04_space-other_T1w.json | 145 +++++++++-------- .../anat/sub-mgh04_space-other_T2star.json | 6 +- .../anat/sub-mgh04_space-other_T2w.json | 147 +++++++++-------- ...ub-mgh05_flip-1_mt-on_space-other_MTS.json | 140 ++++++++-------- ...b-mgh05_flip-2_mt-off_space-other_MTS.json | 138 ++++++++-------- .../anat/sub-mgh05_space-other_T1w.json | 145 +++++++++-------- .../anat/sub-mgh05_space-other_T2star.json | 6 +- .../anat/sub-mgh05_space-other_T2w.json | 147 +++++++++-------- ...ub-mgh06_flip-1_mt-on_space-other_MTS.json | 140 ++++++++-------- ...b-mgh06_flip-2_mt-off_space-other_MTS.json | 138 ++++++++-------- .../anat/sub-mgh06_space-other_T1w.json | 145 +++++++++-------- .../anat/sub-mgh06_space-other_T2star.json | 6 +- .../anat/sub-mgh06_space-other_T2w.json | 147 +++++++++-------- ...-milan01_flip-1_mt-on_space-other_MTS.json | 38 +++-- ...milan01_flip-2_mt-off_space-other_MTS.json | 38 +++-- .../anat/sub-milan01_space-other_T1w.json | 41 +++-- .../anat/sub-milan01_space-other_T2star.json | 6 +- .../anat/sub-milan01_space-other_T2w.json | 41 +++-- ...-milan02_flip-1_mt-on_space-other_MTS.json | 38 +++-- ...milan02_flip-2_mt-off_space-other_MTS.json | 38 +++-- .../anat/sub-milan02_space-other_T1w.json | 41 +++-- .../anat/sub-milan02_space-other_T2star.json | 6 +- .../anat/sub-milan02_space-other_T2w.json | 41 +++-- ...-milan03_flip-1_mt-on_space-other_MTS.json | 38 +++-- ...milan03_flip-2_mt-off_space-other_MTS.json | 38 +++-- .../anat/sub-milan03_space-other_T1w.json | 41 +++-- .../anat/sub-milan03_space-other_T2star.json | 6 +- .../anat/sub-milan03_space-other_T2w.json | 41 +++-- ...-milan04_flip-1_mt-on_space-other_MTS.json | 38 +++-- ...milan04_flip-2_mt-off_space-other_MTS.json | 38 +++-- .../anat/sub-milan04_space-other_T1w.json | 41 +++-- .../anat/sub-milan04_space-other_T2star.json | 6 +- .../anat/sub-milan04_space-other_T2w.json | 41 +++-- ...-milan05_flip-1_mt-on_space-other_MTS.json | 38 +++-- ...milan05_flip-2_mt-off_space-other_MTS.json | 38 +++-- .../anat/sub-milan05_space-other_T1w.json | 41 +++-- .../anat/sub-milan05_space-other_T2star.json | 6 +- .../anat/sub-milan05_space-other_T2w.json | 41 +++-- ...-milan06_flip-1_mt-on_space-other_MTS.json | 38 +++-- ...milan06_flip-2_mt-off_space-other_MTS.json | 38 +++-- .../anat/sub-milan06_space-other_T1w.json | 41 +++-- .../anat/sub-milan06_space-other_T2star.json | 6 +- .../anat/sub-milan06_space-other_T2w.json | 41 +++-- ...-milan07_flip-1_mt-on_space-other_MTS.json | 38 +++-- ...milan07_flip-2_mt-off_space-other_MTS.json | 38 +++-- .../anat/sub-milan07_space-other_T1w.json | 41 +++-- .../anat/sub-milan07_space-other_T2star.json | 6 +- .../anat/sub-milan07_space-other_T2w.json | 41 +++-- ...niPilot1_flip-1_mt-on_space-other_MTS.json | 138 ++++++++-------- ...iPilot1_flip-2_mt-off_space-other_MTS.json | 136 ++++++++-------- .../anat/sub-mniPilot1_space-other_T1w.json | 143 +++++++++-------- .../sub-mniPilot1_space-other_T2star.json | 6 +- .../anat/sub-mniPilot1_space-other_T2w.json | 145 +++++++++-------- ...b-mniS01_flip-1_mt-on_space-other_MTS.json | 139 ++++++++-------- ...-mniS01_flip-2_mt-off_space-other_MTS.json | 137 ++++++++-------- .../anat/sub-mniS01_space-other_T1w.json | 143 +++++++++-------- .../anat/sub-mniS01_space-other_T2star.json | 6 +- .../anat/sub-mniS01_space-other_T2w.json | 145 +++++++++-------- ...b-mniS02_flip-1_mt-on_space-other_MTS.json | 139 ++++++++-------- ...-mniS02_flip-2_mt-off_space-other_MTS.json | 137 ++++++++-------- .../anat/sub-mniS02_space-other_T1w.json | 143 +++++++++-------- .../anat/sub-mniS02_space-other_T2star.json | 6 +- .../anat/sub-mniS02_space-other_T2w.json | 145 +++++++++-------- ...b-mniS03_flip-1_mt-on_space-other_MTS.json | 139 ++++++++-------- ...-mniS03_flip-2_mt-off_space-other_MTS.json | 137 ++++++++-------- .../anat/sub-mniS03_space-other_T1w.json | 143 +++++++++-------- .../anat/sub-mniS03_space-other_T2star.json | 6 +- .../anat/sub-mniS03_space-other_T2w.json | 145 +++++++++-------- ...b-mniS04_flip-1_mt-on_space-other_MTS.json | 139 ++++++++-------- ...-mniS04_flip-2_mt-off_space-other_MTS.json | 137 ++++++++-------- .../anat/sub-mniS04_space-other_T1w.json | 143 +++++++++-------- .../anat/sub-mniS04_space-other_T2star.json | 6 +- .../anat/sub-mniS04_space-other_T2w.json | 145 +++++++++-------- ...b-mniS05_flip-1_mt-on_space-other_MTS.json | 139 ++++++++-------- ...-mniS05_flip-2_mt-off_space-other_MTS.json | 137 ++++++++-------- .../anat/sub-mniS05_space-other_T1w.json | 143 +++++++++-------- .../anat/sub-mniS05_space-other_T2star.json | 6 +- .../anat/sub-mniS05_space-other_T2w.json | 145 +++++++++-------- ...b-mniS06_flip-1_mt-on_space-other_MTS.json | 139 ++++++++-------- ...-mniS06_flip-2_mt-off_space-other_MTS.json | 137 ++++++++-------- .../anat/sub-mniS06_space-other_T1w.json | 143 +++++++++-------- .../anat/sub-mniS06_space-other_T2star.json | 6 +- .../anat/sub-mniS06_space-other_T2w.json | 145 +++++++++-------- ...b-mniS07_flip-1_mt-on_space-other_MTS.json | 139 ++++++++-------- ...-mniS07_flip-2_mt-off_space-other_MTS.json | 137 ++++++++-------- .../anat/sub-mniS07_space-other_T1w.json | 143 +++++++++-------- .../anat/sub-mniS07_space-other_T2star.json | 6 +- .../anat/sub-mniS07_space-other_T2w.json | 145 +++++++++-------- ...b-mniS08_flip-1_mt-on_space-other_MTS.json | 139 ++++++++-------- ...-mniS08_flip-2_mt-off_space-other_MTS.json | 137 ++++++++-------- .../anat/sub-mniS08_space-other_T1w.json | 143 +++++++++-------- .../anat/sub-mniS08_space-other_T2star.json | 6 +- .../anat/sub-mniS08_space-other_T2w.json | 145 +++++++++-------- ...b-mniS09_flip-1_mt-on_space-other_MTS.json | 139 ++++++++-------- ...-mniS09_flip-2_mt-off_space-other_MTS.json | 137 ++++++++-------- .../anat/sub-mniS09_space-other_T1w.json | 143 +++++++++-------- .../anat/sub-mniS09_space-other_T2star.json | 6 +- .../anat/sub-mniS09_space-other_T2w.json | 145 +++++++++-------- ...tSinai01_flip-1_mt-on_space-other_MTS.json | 139 ++++++++-------- ...Sinai01_flip-2_mt-off_space-other_MTS.json | 137 ++++++++-------- .../sub-mountSinai01_space-other_T1w.json | 143 +++++++++-------- .../sub-mountSinai01_space-other_T2star.json | 6 +- .../sub-mountSinai01_space-other_T2w.json | 147 +++++++++-------- ...tSinai02_flip-1_mt-on_space-other_MTS.json | 139 ++++++++-------- ...Sinai02_flip-2_mt-off_space-other_MTS.json | 137 ++++++++-------- .../sub-mountSinai02_space-other_T1w.json | 143 +++++++++-------- .../sub-mountSinai02_space-other_T2star.json | 6 +- .../sub-mountSinai02_space-other_T2w.json | 147 +++++++++-------- ...tSinai03_flip-1_mt-on_space-other_MTS.json | 138 ++++++++-------- ...Sinai03_flip-2_mt-off_space-other_MTS.json | 136 ++++++++-------- .../sub-mountSinai03_space-other_T1w.json | 143 +++++++++-------- .../sub-mountSinai03_space-other_T2star.json | 6 +- .../sub-mountSinai03_space-other_T2w.json | 149 +++++++++-------- ...tSinai04_flip-1_mt-on_space-other_MTS.json | 141 ++++++++-------- ...Sinai04_flip-2_mt-off_space-other_MTS.json | 139 ++++++++-------- .../sub-mountSinai04_space-other_T1w.json | 145 +++++++++-------- .../sub-mountSinai04_space-other_T2star.json | 6 +- .../sub-mountSinai04_space-other_T2w.json | 149 +++++++++-------- ...tSinai05_flip-1_mt-on_space-other_MTS.json | 141 ++++++++-------- ...Sinai05_flip-2_mt-off_space-other_MTS.json | 139 ++++++++-------- .../sub-mountSinai05_space-other_T1w.json | 145 +++++++++-------- .../sub-mountSinai05_space-other_T2star.json | 6 +- .../sub-mountSinai05_space-other_T2w.json | 149 +++++++++-------- ...tSinai06_flip-1_mt-on_space-other_MTS.json | 141 ++++++++-------- ...Sinai06_flip-2_mt-off_space-other_MTS.json | 139 ++++++++-------- .../sub-mountSinai06_space-other_T1w.json | 145 +++++++++-------- .../sub-mountSinai06_space-other_T2star.json | 6 +- .../sub-mountSinai06_space-other_T2w.json | 149 +++++++++-------- ...mpicbs01_flip-1_mt-on_space-other_MTS.json | 139 ++++++++-------- ...picbs01_flip-2_mt-off_space-other_MTS.json | 137 ++++++++-------- .../anat/sub-mpicbs01_space-other_T1w.json | 143 +++++++++-------- .../anat/sub-mpicbs01_space-other_T2star.json | 6 +- .../anat/sub-mpicbs01_space-other_T2w.json | 145 +++++++++-------- ...mpicbs02_flip-1_mt-on_space-other_MTS.json | 139 ++++++++-------- ...picbs02_flip-2_mt-off_space-other_MTS.json | 137 ++++++++-------- .../anat/sub-mpicbs02_space-other_T1w.json | 143 +++++++++-------- .../anat/sub-mpicbs02_space-other_T2star.json | 6 +- .../anat/sub-mpicbs02_space-other_T2w.json | 145 +++++++++-------- ...mpicbs03_flip-1_mt-on_space-other_MTS.json | 139 ++++++++-------- ...picbs03_flip-2_mt-off_space-other_MTS.json | 137 ++++++++-------- .../anat/sub-mpicbs03_space-other_T1w.json | 143 +++++++++-------- .../anat/sub-mpicbs03_space-other_T2star.json | 6 +- .../anat/sub-mpicbs03_space-other_T2w.json | 145 +++++++++-------- ...mpicbs05_flip-1_mt-on_space-other_MTS.json | 139 ++++++++-------- ...picbs05_flip-2_mt-off_space-other_MTS.json | 137 ++++++++-------- .../anat/sub-mpicbs05_space-other_T1w.json | 143 +++++++++-------- .../anat/sub-mpicbs05_space-other_T2star.json | 6 +- .../anat/sub-mpicbs05_space-other_T2w.json | 145 +++++++++-------- ...mpicbs06_flip-1_mt-on_space-other_MTS.json | 139 ++++++++-------- ...picbs06_flip-2_mt-off_space-other_MTS.json | 137 ++++++++-------- .../anat/sub-mpicbs06_space-other_T1w.json | 143 +++++++++-------- .../anat/sub-mpicbs06_space-other_T2star.json | 6 +- .../anat/sub-mpicbs06_space-other_T2w.json | 145 +++++++++-------- ...mpicbs07_flip-1_mt-on_space-other_MTS.json | 139 ++++++++-------- ...picbs07_flip-2_mt-off_space-other_MTS.json | 137 ++++++++-------- .../anat/sub-mpicbs07_space-other_T1w.json | 143 +++++++++-------- .../anat/sub-mpicbs07_space-other_T2star.json | 6 +- .../anat/sub-mpicbs07_space-other_T2w.json | 145 +++++++++-------- ...ottwil01_flip-1_mt-on_space-other_MTS.json | 15 +- ...ttwil01_flip-2_mt-off_space-other_MTS.json | 15 +- .../anat/sub-nottwil01_space-other_T1w.json | 16 +- .../sub-nottwil01_space-other_T2star.json | 6 +- .../anat/sub-nottwil01_space-other_T2w.json | 16 +- ...ottwil02_flip-1_mt-on_space-other_MTS.json | 16 +- ...ttwil02_flip-2_mt-off_space-other_MTS.json | 16 +- .../anat/sub-nottwil02_space-other_T1w.json | 17 +- .../sub-nottwil02_space-other_T2star.json | 6 +- .../anat/sub-nottwil02_space-other_T2w.json | 16 +- ...ottwil03_flip-1_mt-on_space-other_MTS.json | 15 +- ...ttwil03_flip-2_mt-off_space-other_MTS.json | 15 +- .../anat/sub-nottwil03_space-other_T1w.json | 16 +- .../sub-nottwil03_space-other_T2star.json | 6 +- .../anat/sub-nottwil03_space-other_T2w.json | 16 +- ...ottwil04_flip-1_mt-on_space-other_MTS.json | 15 +- ...ttwil04_flip-2_mt-off_space-other_MTS.json | 15 +- .../anat/sub-nottwil04_space-other_T1w.json | 16 +- .../sub-nottwil04_space-other_T2star.json | 6 +- .../anat/sub-nottwil04_space-other_T2w.json | 16 +- ...ottwil05_flip-1_mt-on_space-other_MTS.json | 15 +- ...ttwil05_flip-2_mt-off_space-other_MTS.json | 15 +- .../anat/sub-nottwil05_space-other_T1w.json | 16 +- .../sub-nottwil05_space-other_T2star.json | 6 +- .../anat/sub-nottwil05_space-other_T2w.json | 16 +- ...ottwil06_flip-1_mt-on_space-other_MTS.json | 15 +- ...ttwil06_flip-2_mt-off_space-other_MTS.json | 15 +- .../anat/sub-nottwil06_space-other_T1w.json | 16 +- .../sub-nottwil06_space-other_T2star.json | 6 +- .../anat/sub-nottwil06_space-other_T2w.json | 16 +- ...ub-nwu01_flip-1_mt-on_space-other_MTS.json | 138 ++++++++-------- ...b-nwu01_flip-2_mt-off_space-other_MTS.json | 136 ++++++++-------- .../anat/sub-nwu01_space-other_T1w.json | 143 +++++++++-------- .../anat/sub-nwu01_space-other_T2star.json | 6 +- .../anat/sub-nwu01_space-other_T2w.json | 145 +++++++++-------- ...ub-nwu02_flip-1_mt-on_space-other_MTS.json | 138 ++++++++-------- ...b-nwu02_flip-2_mt-off_space-other_MTS.json | 136 ++++++++-------- .../anat/sub-nwu02_space-other_T1w.json | 143 +++++++++-------- .../anat/sub-nwu02_space-other_T2star.json | 6 +- .../anat/sub-nwu02_space-other_T2w.json | 145 +++++++++-------- ...ub-nwu03_flip-1_mt-on_space-other_MTS.json | 138 ++++++++-------- ...b-nwu03_flip-2_mt-off_space-other_MTS.json | 136 ++++++++-------- .../anat/sub-nwu03_space-other_T1w.json | 143 +++++++++-------- .../anat/sub-nwu03_space-other_T2star.json | 6 +- .../anat/sub-nwu03_space-other_T2w.json | 145 +++++++++-------- ...ub-nwu04_flip-1_mt-on_space-other_MTS.json | 138 ++++++++-------- ...b-nwu04_flip-2_mt-off_space-other_MTS.json | 136 ++++++++-------- .../anat/sub-nwu04_space-other_T1w.json | 143 +++++++++-------- .../anat/sub-nwu04_space-other_T2star.json | 6 +- .../anat/sub-nwu04_space-other_T2w.json | 145 +++++++++-------- ...ub-nwu05_flip-1_mt-on_space-other_MTS.json | 138 ++++++++-------- ...b-nwu05_flip-2_mt-off_space-other_MTS.json | 136 ++++++++-------- .../anat/sub-nwu05_space-other_T1w.json | 143 +++++++++-------- .../anat/sub-nwu05_space-other_T2star.json | 6 +- .../anat/sub-nwu05_space-other_T2w.json | 145 +++++++++-------- ...ub-nwu06_flip-1_mt-on_space-other_MTS.json | 138 ++++++++-------- ...b-nwu06_flip-2_mt-off_space-other_MTS.json | 136 ++++++++-------- .../anat/sub-nwu06_space-other_T1w.json | 143 +++++++++-------- .../anat/sub-nwu06_space-other_T2star.json | 6 +- .../anat/sub-nwu06_space-other_T2w.json | 145 +++++++++-------- ...dFmrib01_flip-1_mt-on_space-other_MTS.json | 138 ++++++++-------- ...Fmrib01_flip-2_mt-off_space-other_MTS.json | 136 ++++++++-------- .../sub-oxfordFmrib01_space-other_T1w.json | 143 +++++++++-------- .../sub-oxfordFmrib01_space-other_T2star.json | 6 +- .../sub-oxfordFmrib01_space-other_T2w.json | 145 +++++++++-------- ...dFmrib02_flip-1_mt-on_space-other_MTS.json | 138 ++++++++-------- ...Fmrib02_flip-2_mt-off_space-other_MTS.json | 136 ++++++++-------- .../sub-oxfordFmrib02_space-other_T1w.json | 143 +++++++++-------- .../sub-oxfordFmrib02_space-other_T2star.json | 6 +- .../sub-oxfordFmrib02_space-other_T2w.json | 145 +++++++++-------- ...dFmrib03_flip-1_mt-on_space-other_MTS.json | 138 ++++++++-------- ...Fmrib03_flip-2_mt-off_space-other_MTS.json | 136 ++++++++-------- .../sub-oxfordFmrib03_space-other_T1w.json | 143 +++++++++-------- .../sub-oxfordFmrib03_space-other_T2star.json | 6 +- .../sub-oxfordFmrib03_space-other_T2w.json | 145 +++++++++-------- ...dFmrib04_flip-1_mt-on_space-other_MTS.json | 138 ++++++++-------- ...Fmrib04_flip-2_mt-off_space-other_MTS.json | 136 ++++++++-------- .../sub-oxfordFmrib04_space-other_T1w.json | 143 +++++++++-------- .../sub-oxfordFmrib04_space-other_T2star.json | 6 +- .../sub-oxfordFmrib04_space-other_T2w.json | 145 +++++++++-------- ...dFmrib05_flip-1_mt-on_space-other_MTS.json | 138 ++++++++-------- ...Fmrib05_flip-2_mt-off_space-other_MTS.json | 136 ++++++++-------- .../sub-oxfordFmrib05_space-other_T1w.json | 143 +++++++++-------- .../sub-oxfordFmrib05_space-other_T2star.json | 6 +- .../sub-oxfordFmrib05_space-other_T2w.json | 145 +++++++++-------- ...dFmrib06_flip-1_mt-on_space-other_MTS.json | 138 ++++++++-------- ...Fmrib06_flip-2_mt-off_space-other_MTS.json | 136 ++++++++-------- .../sub-oxfordFmrib06_space-other_T1w.json | 143 +++++++++-------- .../sub-oxfordFmrib06_space-other_T2star.json | 6 +- .../sub-oxfordFmrib06_space-other_T2w.json | 145 +++++++++-------- ...dFmrib07_flip-1_mt-on_space-other_MTS.json | 138 ++++++++-------- ...Fmrib07_flip-2_mt-off_space-other_MTS.json | 136 ++++++++-------- .../sub-oxfordFmrib07_space-other_T1w.json | 143 +++++++++-------- .../sub-oxfordFmrib07_space-other_T2star.json | 6 +- .../sub-oxfordFmrib07_space-other_T2w.json | 145 +++++++++-------- ...dFmrib08_flip-1_mt-on_space-other_MTS.json | 138 ++++++++-------- ...Fmrib08_flip-2_mt-off_space-other_MTS.json | 136 ++++++++-------- .../sub-oxfordFmrib08_space-other_T1w.json | 143 +++++++++-------- .../sub-oxfordFmrib08_space-other_T2star.json | 6 +- .../sub-oxfordFmrib08_space-other_T2w.json | 145 +++++++++-------- ...dFmrib09_flip-1_mt-on_space-other_MTS.json | 138 ++++++++-------- ...Fmrib09_flip-2_mt-off_space-other_MTS.json | 136 ++++++++-------- .../sub-oxfordFmrib09_space-other_T1w.json | 143 +++++++++-------- .../sub-oxfordFmrib09_space-other_T2star.json | 6 +- .../sub-oxfordFmrib09_space-other_T2w.json | 145 +++++++++-------- ...dFmrib10_flip-1_mt-on_space-other_MTS.json | 138 ++++++++-------- ...Fmrib10_flip-2_mt-off_space-other_MTS.json | 136 ++++++++-------- .../sub-oxfordFmrib10_space-other_T1w.json | 143 +++++++++-------- .../sub-oxfordFmrib10_space-other_T2star.json | 6 +- .../sub-oxfordFmrib10_space-other_T2w.json | 145 +++++++++-------- ...dFmrib11_flip-1_mt-on_space-other_MTS.json | 138 ++++++++-------- ...Fmrib11_flip-2_mt-off_space-other_MTS.json | 136 ++++++++-------- .../sub-oxfordFmrib11_space-other_T1w.json | 143 +++++++++-------- .../sub-oxfordFmrib11_space-other_T2star.json | 6 +- .../sub-oxfordFmrib11_space-other_T2w.json | 145 +++++++++-------- ...rdOhba01_flip-1_mt-on_space-other_MTS.json | 138 ++++++++-------- ...dOhba01_flip-2_mt-off_space-other_MTS.json | 136 ++++++++-------- .../sub-oxfordOhba01_space-other_T1w.json | 143 +++++++++-------- .../sub-oxfordOhba01_space-other_T2star.json | 6 +- .../sub-oxfordOhba01_space-other_T2w.json | 145 +++++++++-------- ...rdOhba02_flip-1_mt-on_space-other_MTS.json | 138 ++++++++-------- ...dOhba02_flip-2_mt-off_space-other_MTS.json | 136 ++++++++-------- .../sub-oxfordOhba02_space-other_T1w.json | 143 +++++++++-------- .../sub-oxfordOhba02_space-other_T2star.json | 6 +- .../sub-oxfordOhba02_space-other_T2w.json | 145 +++++++++-------- ...rdOhba03_flip-1_mt-on_space-other_MTS.json | 138 ++++++++-------- ...dOhba03_flip-2_mt-off_space-other_MTS.json | 136 ++++++++-------- .../sub-oxfordOhba03_space-other_T1w.json | 143 +++++++++-------- .../sub-oxfordOhba03_space-other_T2star.json | 6 +- .../sub-oxfordOhba03_space-other_T2w.json | 145 +++++++++-------- ...rdOhba04_flip-1_mt-on_space-other_MTS.json | 138 ++++++++-------- ...dOhba04_flip-2_mt-off_space-other_MTS.json | 136 ++++++++-------- .../sub-oxfordOhba04_space-other_T1w.json | 143 +++++++++-------- .../sub-oxfordOhba04_space-other_T2star.json | 6 +- .../sub-oxfordOhba04_space-other_T2w.json | 145 +++++++++-------- ...rdOhba05_flip-1_mt-on_space-other_MTS.json | 138 ++++++++-------- ...dOhba05_flip-2_mt-off_space-other_MTS.json | 136 ++++++++-------- .../sub-oxfordOhba05_space-other_T1w.json | 143 +++++++++-------- .../sub-oxfordOhba05_space-other_T2star.json | 6 +- .../sub-oxfordOhba05_space-other_T2w.json | 145 +++++++++-------- ...-pavia01_flip-1_mt-on_space-other_MTS.json | 137 ++++++++-------- ...pavia01_flip-2_mt-off_space-other_MTS.json | 135 ++++++++-------- .../anat/sub-pavia01_space-other_T1w.json | 142 +++++++++-------- .../anat/sub-pavia01_space-other_T2star.json | 6 +- .../anat/sub-pavia01_space-other_T2w.json | 144 +++++++++-------- ...-pavia02_flip-1_mt-on_space-other_MTS.json | 137 ++++++++-------- ...pavia02_flip-2_mt-off_space-other_MTS.json | 135 ++++++++-------- .../anat/sub-pavia02_space-other_T1w.json | 142 +++++++++-------- .../anat/sub-pavia02_space-other_T2star.json | 6 +- .../anat/sub-pavia02_space-other_T2w.json | 144 +++++++++-------- ...-pavia03_flip-1_mt-on_space-other_MTS.json | 137 ++++++++-------- ...pavia03_flip-2_mt-off_space-other_MTS.json | 135 ++++++++-------- .../anat/sub-pavia03_space-other_T1w.json | 142 +++++++++-------- .../anat/sub-pavia03_space-other_T2star.json | 6 +- .../anat/sub-pavia03_space-other_T2w.json | 144 +++++++++-------- ...-pavia04_flip-1_mt-on_space-other_MTS.json | 137 ++++++++-------- ...pavia04_flip-2_mt-off_space-other_MTS.json | 135 ++++++++-------- .../anat/sub-pavia04_space-other_T1w.json | 142 +++++++++-------- .../anat/sub-pavia04_space-other_T2star.json | 6 +- .../anat/sub-pavia04_space-other_T2w.json | 144 +++++++++-------- ...-pavia05_flip-1_mt-on_space-other_MTS.json | 137 ++++++++-------- ...pavia05_flip-2_mt-off_space-other_MTS.json | 135 ++++++++-------- .../anat/sub-pavia05_space-other_T1w.json | 142 +++++++++-------- .../anat/sub-pavia05_space-other_T2star.json | 6 +- .../anat/sub-pavia05_space-other_T2w.json | 144 +++++++++-------- ...-pavia06_flip-1_mt-on_space-other_MTS.json | 137 ++++++++-------- ...pavia06_flip-2_mt-off_space-other_MTS.json | 135 ++++++++-------- .../anat/sub-pavia06_space-other_T1w.json | 142 +++++++++-------- .../anat/sub-pavia06_space-other_T2star.json | 6 +- .../anat/sub-pavia06_space-other_T2w.json | 144 +++++++++-------- ...erform01_flip-1_mt-on_space-other_MTS.json | 90 ++++++----- ...rform01_flip-2_mt-off_space-other_MTS.json | 90 ++++++----- .../anat/sub-perform01_space-other_T1w.json | 93 ++++++----- .../sub-perform01_space-other_T2star.json | 6 +- .../anat/sub-perform01_space-other_T2w.json | 93 ++++++----- ...erform02_flip-1_mt-on_space-other_MTS.json | 90 ++++++----- ...rform02_flip-2_mt-off_space-other_MTS.json | 90 ++++++----- .../anat/sub-perform02_space-other_T1w.json | 93 ++++++----- .../sub-perform02_space-other_T2star.json | 6 +- .../anat/sub-perform02_space-other_T2w.json | 93 ++++++----- ...erform03_flip-1_mt-on_space-other_MTS.json | 90 ++++++----- ...rform03_flip-2_mt-off_space-other_MTS.json | 90 ++++++----- .../anat/sub-perform03_space-other_T1w.json | 93 ++++++----- .../sub-perform03_space-other_T2star.json | 6 +- .../anat/sub-perform03_space-other_T2w.json | 93 ++++++----- ...erform04_flip-1_mt-on_space-other_MTS.json | 90 ++++++----- ...rform04_flip-2_mt-off_space-other_MTS.json | 90 ++++++----- .../anat/sub-perform04_space-other_T1w.json | 93 ++++++----- .../sub-perform04_space-other_T2star.json | 6 +- .../anat/sub-perform04_space-other_T2w.json | 93 ++++++----- ...erform05_flip-1_mt-on_space-other_MTS.json | 90 ++++++----- ...rform05_flip-2_mt-off_space-other_MTS.json | 90 ++++++----- .../anat/sub-perform05_space-other_T1w.json | 93 ++++++----- .../sub-perform05_space-other_T2star.json | 6 +- .../anat/sub-perform05_space-other_T2w.json | 93 ++++++----- ...erform06_flip-1_mt-on_space-other_MTS.json | 90 ++++++----- ...rform06_flip-2_mt-off_space-other_MTS.json | 90 ++++++----- .../anat/sub-perform06_space-other_T1w.json | 93 ++++++----- .../sub-perform06_space-other_T2star.json | 6 +- .../anat/sub-perform06_space-other_T2w.json | 93 ++++++----- ...nsland01_flip-1_mt-on_space-other_MTS.json | 138 ++++++++-------- ...sland01_flip-2_mt-off_space-other_MTS.json | 136 ++++++++-------- .../sub-queensland01_space-other_T1w.json | 143 +++++++++-------- .../sub-queensland01_space-other_T2star.json | 6 +- .../sub-queensland01_space-other_T2w.json | 145 +++++++++-------- ...nsland02_flip-1_mt-on_space-other_MTS.json | 138 ++++++++-------- ...sland02_flip-2_mt-off_space-other_MTS.json | 136 ++++++++-------- .../sub-queensland02_space-other_T1w.json | 143 +++++++++-------- .../sub-queensland02_space-other_T2star.json | 6 +- .../sub-queensland02_space-other_T2w.json | 145 +++++++++-------- ...nsland03_flip-1_mt-on_space-other_MTS.json | 138 ++++++++-------- ...sland03_flip-2_mt-off_space-other_MTS.json | 136 ++++++++-------- .../sub-queensland03_space-other_T1w.json | 143 +++++++++-------- .../sub-queensland03_space-other_T2star.json | 6 +- .../sub-queensland03_space-other_T2w.json | 145 +++++++++-------- ...nsland04_flip-1_mt-on_space-other_MTS.json | 138 ++++++++-------- ...sland04_flip-2_mt-off_space-other_MTS.json | 136 ++++++++-------- .../sub-queensland04_space-other_T1w.json | 143 +++++++++-------- .../sub-queensland04_space-other_T2star.json | 6 +- .../sub-queensland04_space-other_T2w.json | 145 +++++++++-------- ...nsland05_flip-1_mt-on_space-other_MTS.json | 138 ++++++++-------- ...sland05_flip-2_mt-off_space-other_MTS.json | 136 ++++++++-------- .../sub-queensland05_space-other_T1w.json | 143 +++++++++-------- .../sub-queensland05_space-other_T2star.json | 6 +- .../sub-queensland05_space-other_T2w.json | 145 +++++++++-------- ...nsland06_flip-1_mt-on_space-other_MTS.json | 138 ++++++++-------- ...sland06_flip-2_mt-off_space-other_MTS.json | 136 ++++++++-------- .../sub-queensland06_space-other_T1w.json | 143 +++++++++-------- .../sub-queensland06_space-other_T2star.json | 6 +- .../sub-queensland06_space-other_T2w.json | 145 +++++++++-------- ...brooke01_flip-1_mt-on_space-other_MTS.json | 34 ++-- ...rooke01_flip-2_mt-off_space-other_MTS.json | 34 ++-- .../sub-sherbrooke01_space-other_T1w.json | 35 ++-- .../sub-sherbrooke01_space-other_T2star.json | 6 +- .../sub-sherbrooke01_space-other_T2w.json | 35 ++-- ...brooke02_flip-1_mt-on_space-other_MTS.json | 34 ++-- ...rooke02_flip-2_mt-off_space-other_MTS.json | 34 ++-- .../sub-sherbrooke02_space-other_T1w.json | 35 ++-- .../sub-sherbrooke02_space-other_T2star.json | 6 +- .../sub-sherbrooke02_space-other_T2w.json | 35 ++-- ...brooke03_flip-1_mt-on_space-other_MTS.json | 34 ++-- ...rooke03_flip-2_mt-off_space-other_MTS.json | 34 ++-- .../sub-sherbrooke03_space-other_T1w.json | 35 ++-- .../sub-sherbrooke03_space-other_T2star.json | 6 +- .../sub-sherbrooke03_space-other_T2w.json | 35 ++-- ...brooke04_flip-1_mt-on_space-other_MTS.json | 34 ++-- ...rooke04_flip-2_mt-off_space-other_MTS.json | 34 ++-- .../sub-sherbrooke04_space-other_T1w.json | 35 ++-- .../sub-sherbrooke04_space-other_T2star.json | 6 +- .../sub-sherbrooke04_space-other_T2w.json | 35 ++-- ...brooke05_flip-1_mt-on_space-other_MTS.json | 34 ++-- ...rooke05_flip-2_mt-off_space-other_MTS.json | 34 ++-- .../sub-sherbrooke05_space-other_T1w.json | 35 ++-- .../sub-sherbrooke05_space-other_T2star.json | 6 +- .../sub-sherbrooke05_space-other_T2w.json | 35 ++-- ...brooke06_flip-1_mt-on_space-other_MTS.json | 34 ++-- ...rooke06_flip-2_mt-off_space-other_MTS.json | 34 ++-- .../sub-sherbrooke06_space-other_T1w.json | 35 ++-- .../sub-sherbrooke06_space-other_T2star.json | 6 +- .../sub-sherbrooke06_space-other_T2w.json | 35 ++-- ...brooke07_flip-1_mt-on_space-other_MTS.json | 34 ++-- ...rooke07_flip-2_mt-off_space-other_MTS.json | 34 ++-- .../sub-sherbrooke07_space-other_T1w.json | 35 ++-- .../sub-sherbrooke07_space-other_T2star.json | 6 +- .../sub-sherbrooke07_space-other_T2w.json | 35 ++-- ...anford01_flip-1_mt-on_space-other_MTS.json | 90 ++++++----- ...nford01_flip-2_mt-off_space-other_MTS.json | 90 ++++++----- .../anat/sub-stanford01_space-other_T1w.json | 93 ++++++----- .../sub-stanford01_space-other_T2star.json | 6 +- .../anat/sub-stanford01_space-other_T2w.json | 93 ++++++----- ...anford02_flip-1_mt-on_space-other_MTS.json | 90 ++++++----- ...nford02_flip-2_mt-off_space-other_MTS.json | 90 ++++++----- .../anat/sub-stanford02_space-other_T1w.json | 93 ++++++----- .../sub-stanford02_space-other_T2star.json | 6 +- .../anat/sub-stanford02_space-other_T2w.json | 93 ++++++----- ...anford03_flip-1_mt-on_space-other_MTS.json | 90 ++++++----- ...nford03_flip-2_mt-off_space-other_MTS.json | 90 ++++++----- .../anat/sub-stanford03_space-other_T1w.json | 93 ++++++----- .../sub-stanford03_space-other_T2star.json | 6 +- .../anat/sub-stanford03_space-other_T2w.json | 93 ++++++----- ...anford04_flip-1_mt-on_space-other_MTS.json | 90 ++++++----- ...nford04_flip-2_mt-off_space-other_MTS.json | 90 ++++++----- .../anat/sub-stanford04_space-other_T1w.json | 93 ++++++----- .../sub-stanford04_space-other_T2star.json | 6 +- .../anat/sub-stanford04_space-other_T2w.json | 93 ++++++----- ...anford05_flip-1_mt-on_space-other_MTS.json | 90 ++++++----- ...nford05_flip-2_mt-off_space-other_MTS.json | 90 ++++++----- .../anat/sub-stanford05_space-other_T1w.json | 93 ++++++----- .../sub-stanford05_space-other_T2star.json | 6 +- .../anat/sub-stanford05_space-other_T2w.json | 93 ++++++----- ...anford06_flip-1_mt-on_space-other_MTS.json | 90 ++++++----- ...nford06_flip-2_mt-off_space-other_MTS.json | 90 ++++++----- .../anat/sub-stanford06_space-other_T1w.json | 93 ++++++----- .../sub-stanford06_space-other_T2star.json | 6 +- .../anat/sub-stanford06_space-other_T2w.json | 93 ++++++----- ...sbourg01_flip-1_mt-on_space-other_MTS.json | 129 +++++++-------- ...bourg01_flip-2_mt-off_space-other_MTS.json | 127 +++++++-------- .../sub-strasbourg01_space-other_T1w.json | 134 ++++++++-------- .../sub-strasbourg01_space-other_T2star.json | 6 +- .../sub-strasbourg01_space-other_T2w.json | 134 ++++++++-------- ...sbourg02_flip-1_mt-on_space-other_MTS.json | 129 +++++++-------- ...bourg02_flip-2_mt-off_space-other_MTS.json | 127 +++++++-------- .../sub-strasbourg02_space-other_T1w.json | 134 ++++++++-------- .../sub-strasbourg02_space-other_T2star.json | 6 +- .../sub-strasbourg02_space-other_T2w.json | 134 ++++++++-------- ...sbourg03_flip-1_mt-on_space-other_MTS.json | 131 +++++++-------- ...bourg03_flip-2_mt-off_space-other_MTS.json | 129 +++++++-------- .../sub-strasbourg03_space-other_T1w.json | 134 ++++++++-------- .../sub-strasbourg03_space-other_T2star.json | 6 +- .../sub-strasbourg03_space-other_T2w.json | 134 ++++++++-------- ...sbourg04_flip-1_mt-on_space-other_MTS.json | 131 +++++++-------- ...bourg04_flip-2_mt-off_space-other_MTS.json | 129 +++++++-------- .../sub-strasbourg04_space-other_T1w.json | 134 ++++++++-------- .../sub-strasbourg04_space-other_T2star.json | 6 +- .../sub-strasbourg04_space-other_T2w.json | 134 ++++++++-------- ...sbourg05_flip-1_mt-on_space-other_MTS.json | 131 +++++++-------- ...bourg05_flip-2_mt-off_space-other_MTS.json | 129 +++++++-------- .../sub-strasbourg05_space-other_T1w.json | 134 ++++++++-------- .../sub-strasbourg05_space-other_T2star.json | 6 +- .../sub-strasbourg05_space-other_T2w.json | 134 ++++++++-------- ...sbourg06_flip-1_mt-on_space-other_MTS.json | 131 +++++++-------- ...bourg06_flip-2_mt-off_space-other_MTS.json | 129 +++++++-------- .../sub-strasbourg06_space-other_T1w.json | 134 ++++++++-------- .../sub-strasbourg06_space-other_T2star.json | 6 +- .../sub-strasbourg06_space-other_T2w.json | 134 ++++++++-------- ...ehranS01_flip-1_mt-on_space-other_MTS.json | 138 ++++++++-------- ...hranS01_flip-2_mt-off_space-other_MTS.json | 136 ++++++++-------- .../anat/sub-tehranS01_space-other_T1w.json | 143 +++++++++-------- .../sub-tehranS01_space-other_T2star.json | 6 +- .../anat/sub-tehranS01_space-other_T2w.json | 145 +++++++++-------- ...ehranS02_flip-1_mt-on_space-other_MTS.json | 138 ++++++++-------- ...hranS02_flip-2_mt-off_space-other_MTS.json | 136 ++++++++-------- .../anat/sub-tehranS02_space-other_T1w.json | 143 +++++++++-------- .../sub-tehranS02_space-other_T2star.json | 6 +- .../anat/sub-tehranS02_space-other_T2w.json | 145 +++++++++-------- ...ehranS03_flip-1_mt-on_space-other_MTS.json | 138 ++++++++-------- ...hranS03_flip-2_mt-off_space-other_MTS.json | 136 ++++++++-------- .../anat/sub-tehranS03_space-other_T1w.json | 143 +++++++++-------- .../sub-tehranS03_space-other_T2star.json | 6 +- .../anat/sub-tehranS03_space-other_T2w.json | 145 +++++++++-------- ...ehranS04_flip-1_mt-on_space-other_MTS.json | 5 +- ...hranS04_flip-2_mt-off_space-other_MTS.json | 5 +- .../anat/sub-tehranS04_space-other_T1w.json | 6 +- .../sub-tehranS04_space-other_T2star.json | 6 +- .../anat/sub-tehranS04_space-other_T2w.json | 6 +- ...ehranS05_flip-1_mt-on_space-other_MTS.json | 138 ++++++++-------- ...hranS05_flip-2_mt-off_space-other_MTS.json | 136 ++++++++-------- .../anat/sub-tehranS05_space-other_T1w.json | 143 +++++++++-------- .../sub-tehranS05_space-other_T2star.json | 6 +- .../anat/sub-tehranS05_space-other_T2w.json | 145 +++++++++-------- ...ehranS06_flip-1_mt-on_space-other_MTS.json | 138 ++++++++-------- ...hranS06_flip-2_mt-off_space-other_MTS.json | 136 ++++++++-------- .../anat/sub-tehranS06_space-other_T1w.json | 143 +++++++++-------- .../sub-tehranS06_space-other_T2star.json | 6 +- .../anat/sub-tehranS06_space-other_T2w.json | 145 +++++++++-------- ...yo750w01_flip-1_mt-on_space-other_MTS.json | 92 ++++++----- ...o750w01_flip-2_mt-off_space-other_MTS.json | 92 ++++++----- .../anat/sub-tokyo750w01_space-other_T1w.json | 95 ++++++----- .../sub-tokyo750w01_space-other_T2star.json | 6 +- .../anat/sub-tokyo750w01_space-other_T2w.json | 95 ++++++----- ...yo750w02_flip-1_mt-on_space-other_MTS.json | 92 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.../anat/sub-tokyo750w05_space-other_T1w.json | 95 ++++++----- .../sub-tokyo750w05_space-other_T2star.json | 6 +- .../anat/sub-tokyo750w05_space-other_T2w.json | 95 ++++++----- ...yo750w06_flip-1_mt-on_space-other_MTS.json | 92 ++++++----- ...o750w06_flip-2_mt-off_space-other_MTS.json | 92 ++++++----- .../anat/sub-tokyo750w06_space-other_T1w.json | 95 ++++++----- .../sub-tokyo750w06_space-other_T2star.json | 6 +- .../anat/sub-tokyo750w06_space-other_T2w.json | 95 ++++++----- ...yo750w07_flip-1_mt-on_space-other_MTS.json | 92 ++++++----- ...o750w07_flip-2_mt-off_space-other_MTS.json | 92 ++++++----- .../anat/sub-tokyo750w07_space-other_T1w.json | 95 ++++++----- .../sub-tokyo750w07_space-other_T2star.json | 6 +- .../anat/sub-tokyo750w07_space-other_T2w.json | 95 ++++++----- ...ngenia01_flip-1_mt-on_space-other_MTS.json | 109 +++++++------ ...genia01_flip-2_mt-off_space-other_MTS.json | 109 +++++++------ .../sub-tokyoIngenia01_space-other_T1w.json | 112 +++++++------ ...sub-tokyoIngenia01_space-other_T2star.json | 6 +- .../sub-tokyoIngenia01_space-other_T2w.json | 112 +++++++------ ...ngenia02_flip-1_mt-on_space-other_MTS.json | 109 +++++++------ ...genia02_flip-2_mt-off_space-other_MTS.json | 109 +++++++------ .../sub-tokyoIngenia02_space-other_T1w.json | 112 +++++++------ ...sub-tokyoIngenia02_space-other_T2star.json | 6 +- .../sub-tokyoIngenia02_space-other_T2w.json | 112 +++++++------ ...ngenia03_flip-1_mt-on_space-other_MTS.json | 109 +++++++------ ...genia03_flip-2_mt-off_space-other_MTS.json | 109 +++++++------ .../sub-tokyoIngenia03_space-other_T1w.json | 112 +++++++------ ...sub-tokyoIngenia03_space-other_T2star.json | 6 +- .../sub-tokyoIngenia03_space-other_T2w.json | 112 +++++++------ ...ngenia04_flip-1_mt-on_space-other_MTS.json | 109 +++++++------ ...genia04_flip-2_mt-off_space-other_MTS.json | 109 +++++++------ .../sub-tokyoIngenia04_space-other_T1w.json | 112 +++++++------ ...sub-tokyoIngenia04_space-other_T2star.json | 6 +- .../sub-tokyoIngenia04_space-other_T2w.json | 112 +++++++------ ...ngenia05_flip-1_mt-on_space-other_MTS.json | 109 +++++++------ ...genia05_flip-2_mt-off_space-other_MTS.json | 109 +++++++------ .../sub-tokyoIngenia05_space-other_T1w.json | 112 +++++++------ ...sub-tokyoIngenia05_space-other_T2star.json | 6 +- .../sub-tokyoIngenia05_space-other_T2w.json | 112 +++++++------ ...ngenia06_flip-1_mt-on_space-other_MTS.json | 109 +++++++------ ...genia06_flip-2_mt-off_space-other_MTS.json | 109 +++++++------ .../sub-tokyoIngenia06_space-other_T1w.json | 112 +++++++------ ...sub-tokyoIngenia06_space-other_T2star.json | 6 +- .../sub-tokyoIngenia06_space-other_T2w.json | 112 +++++++------ ...ngenia07_flip-1_mt-on_space-other_MTS.json | 109 +++++++------ ...genia07_flip-2_mt-off_space-other_MTS.json | 109 +++++++------ .../sub-tokyoIngenia07_space-other_T1w.json | 112 +++++++------ ...sub-tokyoIngenia07_space-other_T2star.json | 6 +- .../sub-tokyoIngenia07_space-other_T2w.json | 112 +++++++------ ...oSkyra01_flip-1_mt-on_space-other_MTS.json | 140 ++++++++-------- ...Skyra01_flip-2_mt-off_space-other_MTS.json | 138 ++++++++-------- .../sub-tokyoSkyra01_space-other_T1w.json | 145 +++++++++-------- .../sub-tokyoSkyra01_space-other_T2star.json | 6 +- .../sub-tokyoSkyra01_space-other_T2w.json | 147 +++++++++-------- ...oSkyra02_flip-1_mt-on_space-other_MTS.json | 140 ++++++++-------- ...Skyra02_flip-2_mt-off_space-other_MTS.json | 138 ++++++++-------- .../sub-tokyoSkyra02_space-other_T1w.json | 145 +++++++++-------- .../sub-tokyoSkyra02_space-other_T2star.json | 6 +- .../sub-tokyoSkyra02_space-other_T2w.json | 147 +++++++++-------- ...oSkyra03_flip-1_mt-on_space-other_MTS.json | 140 ++++++++-------- ...Skyra03_flip-2_mt-off_space-other_MTS.json | 138 ++++++++-------- .../sub-tokyoSkyra03_space-other_T1w.json | 145 +++++++++-------- .../sub-tokyoSkyra03_space-other_T2star.json | 6 +- .../sub-tokyoSkyra03_space-other_T2w.json | 147 +++++++++-------- ...oSkyra04_flip-1_mt-on_space-other_MTS.json | 140 ++++++++-------- ...Skyra04_flip-2_mt-off_space-other_MTS.json | 138 ++++++++-------- .../sub-tokyoSkyra04_space-other_T1w.json | 145 +++++++++-------- .../sub-tokyoSkyra04_space-other_T2star.json | 6 +- .../sub-tokyoSkyra04_space-other_T2w.json | 147 +++++++++-------- ...oSkyra05_flip-1_mt-on_space-other_MTS.json | 140 ++++++++-------- ...Skyra05_flip-2_mt-off_space-other_MTS.json | 138 ++++++++-------- .../sub-tokyoSkyra05_space-other_T1w.json | 145 +++++++++-------- .../sub-tokyoSkyra05_space-other_T2star.json | 6 +- .../sub-tokyoSkyra05_space-other_T2w.json | 147 +++++++++-------- ...oSkyra06_flip-1_mt-on_space-other_MTS.json | 140 ++++++++-------- ...Skyra06_flip-2_mt-off_space-other_MTS.json | 138 ++++++++-------- .../sub-tokyoSkyra06_space-other_T1w.json | 145 +++++++++-------- .../sub-tokyoSkyra06_space-other_T2star.json | 6 +- .../sub-tokyoSkyra06_space-other_T2w.json | 147 +++++++++-------- ...oSkyra07_flip-1_mt-on_space-other_MTS.json | 140 ++++++++-------- ...Skyra07_flip-2_mt-off_space-other_MTS.json | 138 ++++++++-------- .../sub-tokyoSkyra07_space-other_T1w.json | 145 +++++++++-------- .../sub-tokyoSkyra07_space-other_T2star.json | 6 +- .../sub-tokyoSkyra07_space-other_T2w.json | 147 +++++++++-------- ...ub-ubc01_flip-1_mt-on_space-other_MTS.json | 111 ++++++------- .../anat/sub-ubc01_space-other_T1w.json | 114 ++++++------- .../anat/sub-ubc01_space-other_T2star.json | 6 +- .../anat/sub-ubc01_space-other_T2w.json | 114 ++++++------- ...ub-ubc02_flip-1_mt-on_space-other_MTS.json | 111 ++++++------- ...b-ubc02_flip-2_mt-off_space-other_MTS.json | 111 ++++++------- .../anat/sub-ubc02_space-other_T1w.json | 114 ++++++------- .../anat/sub-ubc02_space-other_T2star.json | 6 +- .../anat/sub-ubc02_space-other_T2w.json | 114 ++++++------- ...ub-ubc03_flip-1_mt-on_space-other_MTS.json | 111 ++++++------- ...b-ubc03_flip-2_mt-off_space-other_MTS.json | 111 ++++++------- .../anat/sub-ubc03_space-other_T1w.json | 114 ++++++------- .../anat/sub-ubc03_space-other_T2star.json | 6 +- .../anat/sub-ubc03_space-other_T2w.json | 114 ++++++------- ...ub-ubc04_flip-1_mt-on_space-other_MTS.json | 111 ++++++------- ...b-ubc04_flip-2_mt-off_space-other_MTS.json | 111 ++++++------- .../anat/sub-ubc04_space-other_T1w.json | 114 ++++++------- .../anat/sub-ubc04_space-other_T2star.json | 6 +- .../anat/sub-ubc04_space-other_T2w.json | 114 ++++++------- ...ub-ubc05_flip-1_mt-on_space-other_MTS.json | 111 ++++++------- ...b-ubc05_flip-2_mt-off_space-other_MTS.json | 111 ++++++------- .../anat/sub-ubc05_space-other_T1w.json | 114 ++++++------- .../anat/sub-ubc05_space-other_T2star.json | 6 +- .../anat/sub-ubc05_space-other_T2w.json | 114 ++++++------- ...ub-ubc06_flip-1_mt-on_space-other_MTS.json | 111 ++++++------- ...b-ubc06_flip-2_mt-off_space-other_MTS.json | 111 ++++++------- .../anat/sub-ubc06_space-other_T1w.json | 114 ++++++------- .../anat/sub-ubc06_space-other_T2star.json | 6 +- .../anat/sub-ubc06_space-other_T2w.json | 114 ++++++------- ...cdavis01_flip-1_mt-on_space-other_MTS.json | 5 +- ...davis01_flip-2_mt-off_space-other_MTS.json | 5 +- .../anat/sub-ucdavis01_space-other_T1w.json | 6 +- .../sub-ucdavis01_space-other_T2star.json | 6 +- .../anat/sub-ucdavis01_space-other_T2w.json | 6 +- ...cdavis02_flip-1_mt-on_space-other_MTS.json | 5 +- ...davis02_flip-2_mt-off_space-other_MTS.json | 5 +- .../anat/sub-ucdavis02_space-other_T1w.json | 6 +- .../sub-ucdavis02_space-other_T2star.json | 6 +- .../anat/sub-ucdavis02_space-other_T2w.json | 6 +- ...cdavis03_flip-1_mt-on_space-other_MTS.json | 5 +- .../anat/sub-ucdavis03_space-other_T1w.json | 6 +- .../sub-ucdavis03_space-other_T2star.json | 6 +- .../anat/sub-ucdavis03_space-other_T2w.json | 6 +- ...cdavis04_flip-1_mt-on_space-other_MTS.json | 5 +- ...davis04_flip-2_mt-off_space-other_MTS.json | 5 +- .../anat/sub-ucdavis04_space-other_T1w.json | 6 +- .../sub-ucdavis04_space-other_T2star.json | 6 +- .../anat/sub-ucdavis04_space-other_T2w.json | 6 +- ...cdavis05_flip-1_mt-on_space-other_MTS.json | 5 +- .../anat/sub-ucdavis05_space-other_T1w.json | 6 +- .../sub-ucdavis05_space-other_T2star.json | 6 +- .../anat/sub-ucdavis05_space-other_T2w.json | 6 +- ...cdavis06_flip-1_mt-on_space-other_MTS.json | 5 +- .../anat/sub-ucdavis06_space-other_T1w.json | 6 +- .../sub-ucdavis06_space-other_T2star.json | 6 +- .../anat/sub-ucdavis06_space-other_T2w.json | 6 +- ...cdavis07_flip-1_mt-on_space-other_MTS.json | 5 +- .../anat/sub-ucdavis07_space-other_T1w.json | 6 +- .../sub-ucdavis07_space-other_T2star.json | 6 +- .../anat/sub-ucdavis07_space-other_T2w.json | 6 +- ...ub-ucl01_flip-1_mt-on_space-other_MTS.json | 17 +- ...b-ucl01_flip-2_mt-off_space-other_MTS.json | 17 +- .../anat/sub-ucl01_space-other_T1w.json | 18 ++- .../anat/sub-ucl01_space-other_T2star.json | 6 +- .../anat/sub-ucl01_space-other_T2w.json | 18 ++- ...ub-ucl02_flip-1_mt-on_space-other_MTS.json | 17 +- ...b-ucl02_flip-2_mt-off_space-other_MTS.json | 17 +- .../anat/sub-ucl02_space-other_T1w.json | 18 ++- .../anat/sub-ucl02_space-other_T2star.json | 6 +- .../anat/sub-ucl02_space-other_T2w.json | 18 ++- ...ub-ucl03_flip-1_mt-on_space-other_MTS.json | 17 +- ...b-ucl03_flip-2_mt-off_space-other_MTS.json | 17 +- .../anat/sub-ucl03_space-other_T1w.json | 18 ++- .../anat/sub-ucl03_space-other_T2star.json | 6 +- .../anat/sub-ucl03_space-other_T2w.json | 18 ++- ...ub-ucl04_flip-1_mt-on_space-other_MTS.json | 17 +- ...b-ucl04_flip-2_mt-off_space-other_MTS.json | 17 +- .../anat/sub-ucl04_space-other_T1w.json | 18 ++- .../anat/sub-ucl04_space-other_T2star.json | 6 +- .../anat/sub-ucl04_space-other_T2w.json | 18 ++- ...ub-ucl05_flip-1_mt-on_space-other_MTS.json | 17 +- ...b-ucl05_flip-2_mt-off_space-other_MTS.json | 17 +- .../anat/sub-ucl05_space-other_T1w.json | 18 ++- .../anat/sub-ucl05_space-other_T2star.json | 6 +- .../anat/sub-ucl05_space-other_T2w.json | 18 ++- ...ub-ucl06_flip-1_mt-on_space-other_MTS.json | 17 +- ...b-ucl06_flip-2_mt-off_space-other_MTS.json | 17 +- .../anat/sub-ucl06_space-other_T1w.json | 18 ++- .../anat/sub-ucl06_space-other_T2star.json | 6 +- .../anat/sub-ucl06_space-other_T2w.json | 18 ++- ...ub-unf01_flip-1_mt-on_space-other_MTS.json | 138 ++++++++-------- ...b-unf01_flip-2_mt-off_space-other_MTS.json | 136 ++++++++-------- .../anat/sub-unf01_space-other_T1w.json | 139 ++++++++-------- .../anat/sub-unf01_space-other_T2star.json | 6 +- .../anat/sub-unf01_space-other_T2w.json | 145 +++++++++-------- ...ub-unf02_flip-1_mt-on_space-other_MTS.json | 138 ++++++++-------- ...b-unf02_flip-2_mt-off_space-other_MTS.json | 136 ++++++++-------- .../anat/sub-unf02_space-other_T1w.json | 143 +++++++++-------- .../anat/sub-unf02_space-other_T2star.json | 6 +- .../anat/sub-unf02_space-other_T2w.json | 145 +++++++++-------- ...ub-unf03_flip-1_mt-on_space-other_MTS.json | 138 ++++++++-------- ...b-unf03_flip-2_mt-off_space-other_MTS.json | 136 ++++++++-------- .../anat/sub-unf03_space-other_T1w.json | 143 +++++++++-------- .../anat/sub-unf03_space-other_T2star.json | 6 +- .../anat/sub-unf03_space-other_T2w.json | 145 +++++++++-------- ...ub-unf04_flip-1_mt-on_space-other_MTS.json | 138 ++++++++-------- ...b-unf04_flip-2_mt-off_space-other_MTS.json | 136 ++++++++-------- .../anat/sub-unf04_space-other_T1w.json | 143 +++++++++-------- .../anat/sub-unf04_space-other_T2star.json | 6 +- .../anat/sub-unf04_space-other_T2w.json | 141 ++++++++-------- ...ub-unf05_flip-1_mt-on_space-other_MTS.json | 138 ++++++++-------- ...b-unf05_flip-2_mt-off_space-other_MTS.json | 136 ++++++++-------- .../anat/sub-unf05_space-other_T1w.json | 143 +++++++++-------- .../anat/sub-unf05_space-other_T2star.json | 6 +- .../anat/sub-unf05_space-other_T2w.json | 145 +++++++++-------- ...ub-unf06_flip-1_mt-on_space-other_MTS.json | 138 ++++++++-------- ...b-unf06_flip-2_mt-off_space-other_MTS.json | 136 ++++++++-------- .../anat/sub-unf06_space-other_T1w.json | 143 +++++++++-------- .../anat/sub-unf06_space-other_T2star.json | 6 +- .../anat/sub-unf06_space-other_T2w.json | 145 +++++++++-------- ...ub-unf07_flip-1_mt-on_space-other_MTS.json | 139 ++++++++-------- ...b-unf07_flip-2_mt-off_space-other_MTS.json | 137 ++++++++-------- .../anat/sub-unf07_space-other_T1w.json | 143 +++++++++-------- .../anat/sub-unf07_space-other_T2star.json | 6 +- .../anat/sub-unf07_space-other_T2w.json | 145 +++++++++-------- ...Hebron01_flip-1_mt-on_space-other_MTS.json | 126 ++++++++------- ...ebron01_flip-2_mt-off_space-other_MTS.json | 124 ++++++++------- .../sub-vallHebron01_space-other_T1w.json | 130 ++++++++------- .../sub-vallHebron01_space-other_T2star.json | 6 +- .../sub-vallHebron01_space-other_T2w.json | 130 ++++++++------- ...Hebron02_flip-1_mt-on_space-other_MTS.json | 126 ++++++++------- ...ebron02_flip-2_mt-off_space-other_MTS.json | 124 ++++++++------- .../sub-vallHebron02_space-other_T1w.json | 130 ++++++++------- .../sub-vallHebron02_space-other_T2star.json | 6 +- .../sub-vallHebron02_space-other_T2w.json | 130 ++++++++------- ...Hebron03_flip-1_mt-on_space-other_MTS.json | 126 ++++++++------- ...ebron03_flip-2_mt-off_space-other_MTS.json | 124 ++++++++------- .../sub-vallHebron03_space-other_T1w.json | 130 ++++++++------- .../sub-vallHebron03_space-other_T2star.json | 6 +- .../sub-vallHebron03_space-other_T2w.json | 130 ++++++++------- ...Hebron04_flip-1_mt-on_space-other_MTS.json | 126 ++++++++------- ...ebron04_flip-2_mt-off_space-other_MTS.json | 124 ++++++++------- .../sub-vallHebron04_space-other_T1w.json | 130 ++++++++------- .../sub-vallHebron04_space-other_T2star.json | 6 +- .../sub-vallHebron04_space-other_T2w.json | 130 ++++++++------- ...Hebron05_flip-1_mt-on_space-other_MTS.json | 126 ++++++++------- ...ebron05_flip-2_mt-off_space-other_MTS.json | 124 ++++++++------- .../sub-vallHebron05_space-other_T1w.json | 130 ++++++++------- .../sub-vallHebron05_space-other_T2star.json | 6 +- .../sub-vallHebron05_space-other_T2w.json | 130 ++++++++------- ...Hebron06_flip-1_mt-on_space-other_MTS.json | 126 ++++++++------- ...ebron06_flip-2_mt-off_space-other_MTS.json | 124 ++++++++------- .../sub-vallHebron06_space-other_T1w.json | 130 ++++++++------- .../sub-vallHebron06_space-other_T2star.json | 6 +- .../sub-vallHebron06_space-other_T2w.json | 130 ++++++++------- ...Hebron07_flip-1_mt-on_space-other_MTS.json | 126 ++++++++------- ...ebron07_flip-2_mt-off_space-other_MTS.json | 124 ++++++++------- .../sub-vallHebron07_space-other_T1w.json | 130 ++++++++------- .../sub-vallHebron07_space-other_T2star.json | 6 +- .../sub-vallHebron07_space-other_T2w.json | 130 ++++++++------- ...chieva01_flip-1_mt-on_space-other_MTS.json | 111 +++++++------ ...hieva01_flip-2_mt-off_space-other_MTS.json | 111 +++++++------ .../sub-vuiisAchieva01_space-other_T1w.json | 114 +++++++------ ...sub-vuiisAchieva01_space-other_T2star.json | 6 +- .../sub-vuiisAchieva01_space-other_T2w.json | 114 +++++++------ ...chieva02_flip-1_mt-on_space-other_MTS.json | 111 +++++++------ ...hieva02_flip-2_mt-off_space-other_MTS.json | 111 +++++++------ .../sub-vuiisAchieva02_space-other_T1w.json | 114 +++++++------ ...sub-vuiisAchieva02_space-other_T2star.json | 6 +- .../sub-vuiisAchieva02_space-other_T2w.json | 114 +++++++------ ...chieva03_flip-1_mt-on_space-other_MTS.json | 113 +++++++------ ...hieva03_flip-2_mt-off_space-other_MTS.json | 113 +++++++------ .../sub-vuiisAchieva03_space-other_T1w.json | 116 ++++++++------ ...sub-vuiisAchieva03_space-other_T2star.json | 6 +- .../sub-vuiisAchieva03_space-other_T2w.json | 116 ++++++++------ ...chieva04_flip-1_mt-on_space-other_MTS.json | 113 +++++++------ ...hieva04_flip-2_mt-off_space-other_MTS.json | 113 +++++++------ .../sub-vuiisAchieva04_space-other_T1w.json | 116 ++++++++------ ...sub-vuiisAchieva04_space-other_T2star.json | 6 +- .../sub-vuiisAchieva04_space-other_T2w.json | 116 ++++++++------ ...chieva05_flip-1_mt-on_space-other_MTS.json | 111 +++++++------ ...hieva05_flip-2_mt-off_space-other_MTS.json | 111 +++++++------ .../sub-vuiisAchieva05_space-other_T1w.json | 114 +++++++------ ...sub-vuiisAchieva05_space-other_T2star.json | 6 +- .../sub-vuiisAchieva05_space-other_T2w.json | 114 +++++++------ ...chieva06_flip-1_mt-on_space-other_MTS.json | 113 +++++++------ ...hieva06_flip-2_mt-off_space-other_MTS.json | 113 +++++++------ .../sub-vuiisAchieva06_space-other_T1w.json | 116 ++++++++------ ...sub-vuiisAchieva06_space-other_T2star.json | 6 +- .../sub-vuiisAchieva06_space-other_T2w.json | 116 ++++++++------ ...ngenia01_flip-1_mt-on_space-other_MTS.json | 111 +++++++------ ...genia01_flip-2_mt-off_space-other_MTS.json | 111 +++++++------ .../sub-vuiisIngenia01_space-other_T1w.json | 114 +++++++------ ...sub-vuiisIngenia01_space-other_T2star.json | 6 +- .../sub-vuiisIngenia01_space-other_T2w.json | 114 +++++++------ ...ngenia02_flip-1_mt-on_space-other_MTS.json | 113 +++++++------ ...genia02_flip-2_mt-off_space-other_MTS.json | 113 +++++++------ .../sub-vuiisIngenia02_space-other_T1w.json | 116 ++++++++------ ...sub-vuiisIngenia02_space-other_T2star.json | 6 +- .../sub-vuiisIngenia02_space-other_T2w.json | 116 ++++++++------ ...ngenia03_flip-1_mt-on_space-other_MTS.json | 113 +++++++------ ...genia03_flip-2_mt-off_space-other_MTS.json | 113 +++++++------ .../sub-vuiisIngenia03_space-other_T1w.json | 116 ++++++++------ ...sub-vuiisIngenia03_space-other_T2star.json | 6 +- .../sub-vuiisIngenia03_space-other_T2w.json | 116 ++++++++------ ...ngenia04_flip-1_mt-on_space-other_MTS.json | 113 +++++++------ ...genia04_flip-2_mt-off_space-other_MTS.json | 113 +++++++------ .../sub-vuiisIngenia04_space-other_T1w.json | 116 ++++++++------ ...sub-vuiisIngenia04_space-other_T2star.json | 6 +- .../sub-vuiisIngenia04_space-other_T2w.json | 116 ++++++++------ ...ngenia05_flip-1_mt-on_space-other_MTS.json | 111 +++++++------ ...genia05_flip-2_mt-off_space-other_MTS.json | 111 +++++++------ .../sub-vuiisIngenia05_space-other_T1w.json | 114 +++++++------ ...sub-vuiisIngenia05_space-other_T2star.json | 6 +- .../sub-vuiisIngenia05_space-other_T2w.json | 114 +++++++------ ...ngenia06_flip-1_mt-on_space-other_MTS.json | 113 +++++++------ ...genia06_flip-2_mt-off_space-other_MTS.json | 113 +++++++------ .../sub-vuiisIngenia06_space-other_T1w.json | 116 ++++++++------ ...sub-vuiisIngenia06_space-other_T2star.json | 6 +- .../sub-vuiisIngenia06_space-other_T2w.json | 116 ++++++++------ ...-1_mt-on_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...2_mt-off_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...ub-amu01_space-other_T1w_label-SC_seg.json | 6 +- ...amu01_space-other_T2star_label-SC_seg.json | 6 +- ...r_T2star_label-discs_desc-warp_dlabel.json | 12 ++ ...ub-amu01_space-other_T2w_label-SC_seg.json | 6 +- ...rage_dwi_label-discs_desc-warp_dlabel.json | 9 ++ ...-1_mt-on_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...2_mt-off_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...ub-amu02_space-other_T1w_label-SC_seg.json | 6 +- ...amu02_space-other_T2star_label-SC_seg.json | 6 +- ...r_T2star_label-discs_desc-warp_dlabel.json | 12 ++ ...ub-amu02_space-other_T2w_label-SC_seg.json | 6 +- ...rage_dwi_label-discs_desc-warp_dlabel.json | 9 ++ ...-1_mt-on_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...2_mt-off_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...ub-amu03_space-other_T1w_label-SC_seg.json | 6 +- ...amu03_space-other_T2star_label-SC_seg.json | 6 +- ...r_T2star_label-discs_desc-warp_dlabel.json | 12 ++ ...ub-amu03_space-other_T2w_label-SC_seg.json | 6 +- ...rage_dwi_label-discs_desc-warp_dlabel.json | 9 ++ ...-1_mt-on_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...2_mt-off_space-other_MTS_label-SC_seg.json | 7 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...ub-amu04_space-other_T1w_label-SC_seg.json | 6 +- ...amu04_space-other_T2star_label-SC_seg.json | 6 +- ...r_T2star_label-discs_desc-warp_dlabel.json | 12 ++ ...ub-amu04_space-other_T2w_label-SC_seg.json | 6 +- ...rage_dwi_label-discs_desc-warp_dlabel.json | 9 ++ ...-1_mt-on_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...2_mt-off_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...ub-amu05_space-other_T1w_label-SC_seg.json | 6 +- ...amu05_space-other_T2star_label-SC_seg.json | 6 +- ...r_T2star_label-discs_desc-warp_dlabel.json | 12 ++ ...ub-amu05_space-other_T2w_label-SC_seg.json | 6 +- ...rage_dwi_label-discs_desc-warp_dlabel.json | 9 ++ ...-1_mt-on_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...2_mt-off_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...lgrist01_space-other_T1w_label-SC_seg.json | 6 +- ...ist01_space-other_T2star_label-SC_seg.json | 6 +- ...r_T2star_label-discs_desc-warp_dlabel.json | 12 ++ ...lgrist01_space-other_T2w_label-SC_seg.json | 6 +- ...rage_dwi_label-discs_desc-warp_dlabel.json | 9 ++ ...-1_mt-on_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...2_mt-off_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...lgrist02_space-other_T1w_label-SC_seg.json | 6 +- ...ist02_space-other_T2star_label-SC_seg.json | 6 +- ...r_T2star_label-discs_desc-warp_dlabel.json | 12 ++ ...lgrist02_space-other_T2w_label-SC_seg.json | 6 +- ...rage_dwi_label-discs_desc-warp_dlabel.json | 9 ++ ...-1_mt-on_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...2_mt-off_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...lgrist03_space-other_T1w_label-SC_seg.json | 6 +- ...ist03_space-other_T2star_label-SC_seg.json | 6 +- ...r_T2star_label-discs_desc-warp_dlabel.json | 12 ++ ...lgrist03_space-other_T2w_label-SC_seg.json | 6 +- ...rage_dwi_label-discs_desc-warp_dlabel.json | 9 ++ ...-1_mt-on_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...2_mt-off_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...lgrist04_space-other_T1w_label-SC_seg.json | 6 +- ...ist04_space-other_T2star_label-SC_seg.json | 6 +- ...r_T2star_label-discs_desc-warp_dlabel.json | 12 ++ ...lgrist04_space-other_T2w_label-SC_seg.json | 6 +- ...rage_dwi_label-discs_desc-warp_dlabel.json | 9 ++ ...-1_mt-on_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...2_mt-off_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...lgrist05_space-other_T1w_label-SC_seg.json | 6 +- ...ist05_space-other_T2star_label-SC_seg.json | 6 +- ...r_T2star_label-discs_desc-warp_dlabel.json | 12 ++ ...lgrist05_space-other_T2w_label-SC_seg.json | 6 +- ...rage_dwi_label-discs_desc-warp_dlabel.json | 9 ++ ...-1_mt-on_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...2_mt-off_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...lgrist06_space-other_T1w_label-SC_seg.json | 6 +- ...ist06_space-other_T2star_label-SC_seg.json | 6 +- ...r_T2star_label-discs_desc-warp_dlabel.json | 12 ++ ...lgrist06_space-other_T2w_label-SC_seg.json | 6 +- ...rage_dwi_label-discs_desc-warp_dlabel.json | 9 ++ ...-1_mt-on_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...2_mt-off_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...celona01_space-other_T1w_label-SC_seg.json | 6 +- ...ona01_space-other_T2star_label-SC_seg.json | 6 +- ...r_T2star_label-discs_desc-warp_dlabel.json | 12 ++ ...celona01_space-other_T2w_label-SC_seg.json | 6 +- ...rage_dwi_label-discs_desc-warp_dlabel.json | 9 ++ ...-1_mt-on_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...2_mt-off_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...celona02_space-other_T1w_label-SC_seg.json | 6 +- ...ona02_space-other_T2star_label-SC_seg.json | 6 +- ...r_T2star_label-discs_desc-warp_dlabel.json | 12 ++ ...celona02_space-other_T2w_label-SC_seg.json | 6 +- ...rage_dwi_label-discs_desc-warp_dlabel.json | 9 ++ ...-1_mt-on_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...2_mt-off_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...celona03_space-other_T1w_label-SC_seg.json | 6 +- ...ona03_space-other_T2star_label-SC_seg.json | 6 +- ...r_T2star_label-discs_desc-warp_dlabel.json | 12 ++ ...celona03_space-other_T2w_label-SC_seg.json | 6 +- ...rage_dwi_label-discs_desc-warp_dlabel.json | 9 ++ ...-1_mt-on_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...2_mt-off_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...celona04_space-other_T1w_label-SC_seg.json | 6 +- ...ona04_space-other_T2star_label-SC_seg.json | 6 +- ...r_T2star_label-discs_desc-warp_dlabel.json | 12 ++ ...celona04_space-other_T2w_label-SC_seg.json | 6 +- ...rage_dwi_label-discs_desc-warp_dlabel.json | 9 ++ ...-1_mt-on_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...2_mt-off_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...celona05_space-other_T1w_label-SC_seg.json | 6 +- ...ona05_space-other_T2star_label-SC_seg.json | 6 +- ...r_T2star_label-discs_desc-warp_dlabel.json | 12 ++ ...ona05_space-other_T2w_csflabel-SC_seg.json | 8 +- ...celona05_space-other_T2w_label-SC_seg.json | 6 +- ...rage_dwi_label-discs_desc-warp_dlabel.json | 9 ++ ...-1_mt-on_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...2_mt-off_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...celona06_space-other_T1w_label-SC_seg.json | 6 +- ...ona06_space-other_T2star_label-SC_seg.json | 6 +- ...r_T2star_label-discs_desc-warp_dlabel.json | 12 ++ ...celona06_space-other_T2w_label-SC_seg.json | 6 +- ...rage_dwi_label-discs_desc-warp_dlabel.json | 9 ++ ...jingGE01_space-other_T1w_label-SC_seg.json | 6 +- ...gGE01_space-other_T2star_label-SC_seg.json | 8 +- ...jingGE01_space-other_T2w_label-SC_seg.json | 6 +- ...jingGE02_space-other_T1w_label-SC_seg.json | 6 +- ...gGE02_space-other_T2star_label-SC_seg.json | 8 +- ...jingGE02_space-other_T2w_label-SC_seg.json | 6 +- ...jingGE03_space-other_T1w_label-SC_seg.json | 6 +- ...gGE03_space-other_T2star_label-SC_seg.json | 8 +- ...jingGE03_space-other_T2w_label-SC_seg.json | 6 +- ...jingGE04_space-other_T1w_label-SC_seg.json | 6 +- ...jingGE04_space-other_T2w_label-SC_seg.json | 6 +- ...-1_mt-on_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...2_mt-off_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...Prisma01_space-other_T1w_label-SC_seg.json | 6 +- ...sma01_space-other_T2star_label-SC_seg.json | 6 +- ...r_T2star_label-discs_desc-warp_dlabel.json | 12 ++ ...Prisma01_space-other_T2w_label-SC_seg.json | 6 +- ...rage_dwi_label-discs_desc-warp_dlabel.json | 9 ++ ...-1_mt-on_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...2_mt-off_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...Prisma02_space-other_T1w_label-SC_seg.json | 6 +- ...sma02_space-other_T2star_label-SC_seg.json | 6 +- ...r_T2star_label-discs_desc-warp_dlabel.json | 12 ++ ...Prisma02_space-other_T2w_label-SC_seg.json | 6 +- ...rage_dwi_label-discs_desc-warp_dlabel.json | 9 ++ ...-1_mt-on_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...2_mt-off_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...Prisma03_space-other_T1w_label-SC_seg.json | 6 +- ...sma03_space-other_T2star_label-SC_seg.json | 6 +- ...r_T2star_label-discs_desc-warp_dlabel.json | 12 ++ ...Prisma03_space-other_T2w_label-SC_seg.json | 6 +- ...rage_dwi_label-discs_desc-warp_dlabel.json | 9 ++ ...-1_mt-on_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...2_mt-off_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...Prisma04_space-other_T1w_label-SC_seg.json | 6 +- ...sma04_space-other_T2star_label-SC_seg.json | 6 +- ...r_T2star_label-discs_desc-warp_dlabel.json | 12 ++ ...Prisma04_space-other_T2w_label-SC_seg.json | 6 +- ...rage_dwi_label-discs_desc-warp_dlabel.json | 9 ++ ...-1_mt-on_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...2_mt-off_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...Prisma05_space-other_T1w_label-SC_seg.json | 6 +- ...sma05_space-other_T2star_label-SC_seg.json | 6 +- ...r_T2star_label-discs_desc-warp_dlabel.json | 12 ++ ...Prisma05_space-other_T2w_label-SC_seg.json | 6 +- ...rage_dwi_label-discs_desc-warp_dlabel.json | 9 ++ ...gVerio01_space-other_T1w_label-SC_seg.json | 6 +- ...rio01_space-other_T2star_label-SC_seg.json | 8 +- ...gVerio01_space-other_T2w_label-SC_seg.json | 6 +- ...gVerio02_space-other_T1w_label-SC_seg.json | 6 +- ...rio02_space-other_T2star_label-SC_seg.json | 6 +- ...gVerio02_space-other_T2w_label-SC_seg.json | 6 +- ...gVerio03_space-other_T1w_label-SC_seg.json | 6 +- ...rio03_space-other_T2star_label-SC_seg.json | 6 +- ...gVerio03_space-other_T2w_label-SC_seg.json | 6 +- ...gVerio04_space-other_T1w_label-SC_seg.json | 8 +- ...rio04_space-other_T2star_label-SC_seg.json | 8 +- ...gVerio04_space-other_T2w_label-SC_seg.json | 8 +- ...-1_mt-on_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...2_mt-off_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...Ceitec01_space-other_T1w_label-SC_seg.json | 6 +- ...tec01_space-other_T2star_label-SC_seg.json | 6 +- ...r_T2star_label-discs_desc-warp_dlabel.json | 12 ++ ...Ceitec01_space-other_T2w_label-SC_seg.json | 6 +- ...rage_dwi_label-discs_desc-warp_dlabel.json | 9 ++ ...-1_mt-on_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...2_mt-off_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...Ceitec02_space-other_T1w_label-SC_seg.json | 6 +- ...tec02_space-other_T2star_label-SC_seg.json | 6 +- ...r_T2star_label-discs_desc-warp_dlabel.json | 12 ++ ...Ceitec02_space-other_T2w_label-SC_seg.json | 6 +- ...rage_dwi_label-discs_desc-warp_dlabel.json | 9 ++ ...-1_mt-on_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...2_mt-off_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...Ceitec03_space-other_T1w_label-SC_seg.json | 6 +- ...tec03_space-other_T2star_label-SC_seg.json | 6 +- ...r_T2star_label-discs_desc-warp_dlabel.json | 12 ++ ...Ceitec03_space-other_T2w_label-SC_seg.json | 6 +- ...rage_dwi_label-discs_desc-warp_dlabel.json | 9 ++ ...-1_mt-on_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...2_mt-off_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...Ceitec04_space-other_T1w_label-SC_seg.json | 6 +- ...tec04_space-other_T2star_label-SC_seg.json | 6 +- ...r_T2star_label-discs_desc-warp_dlabel.json | 12 ++ ...Ceitec04_space-other_T2w_label-SC_seg.json | 6 +- ...rage_dwi_label-discs_desc-warp_dlabel.json | 9 ++ ...-1_mt-on_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...2_mt-off_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...Ceitec05_space-other_T1w_label-SC_seg.json | 6 +- ...tec05_space-other_T2star_label-SC_seg.json | 6 +- ...r_T2star_label-discs_desc-warp_dlabel.json | 12 ++ ...Ceitec05_space-other_T2w_label-SC_seg.json | 6 +- ...rage_dwi_label-discs_desc-warp_dlabel.json | 9 ++ ...-1_mt-on_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...2_mt-off_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...Ceitec06_space-other_T1w_label-SC_seg.json | 6 +- ...tec06_space-other_T2star_label-SC_seg.json | 6 +- ...r_T2star_label-discs_desc-warp_dlabel.json | 12 ++ ...Ceitec06_space-other_T2w_label-SC_seg.json | 6 +- ...rage_dwi_label-discs_desc-warp_dlabel.json | 9 ++ ...-1_mt-on_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...2_mt-off_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...rnoUhb01_space-other_T1w_label-SC_seg.json | 6 +- ...Uhb01_space-other_T2star_label-SC_seg.json | 6 +- ...r_T2star_label-discs_desc-warp_dlabel.json | 12 ++ ...rnoUhb01_space-other_T2w_label-SC_seg.json | 6 +- ...rage_dwi_label-discs_desc-warp_dlabel.json | 9 ++ ...-1_mt-on_space-other_MTS_label-SC_seg.json | 5 +- ...2_mt-off_space-other_MTS_label-SC_seg.json | 5 +- ...rnoUhb02_space-other_T1w_label-SC_seg.json | 6 +- ...Uhb02_space-other_T2star_label-SC_seg.json | 6 +- ...rnoUhb02_space-other_T2w_label-SC_seg.json | 6 +- ...-1_mt-on_space-other_MTS_label-SC_seg.json | 5 +- ...2_mt-off_space-other_MTS_label-SC_seg.json | 5 +- ...rnoUhb03_space-other_T1w_label-SC_seg.json | 6 +- ...Uhb03_space-other_T2star_label-SC_seg.json | 6 +- ...rnoUhb03_space-other_T2w_label-SC_seg.json | 6 +- ...-1_mt-on_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...2_mt-off_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...rnoUhb04_space-other_T1w_label-SC_seg.json | 6 +- ...Uhb04_space-other_T2star_label-SC_seg.json | 6 +- ...r_T2star_label-discs_desc-warp_dlabel.json | 12 ++ ...rnoUhb04_space-other_T2w_label-SC_seg.json | 6 +- ...rage_dwi_label-discs_desc-warp_dlabel.json | 9 ++ ...-1_mt-on_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...2_mt-off_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...rnoUhb05_space-other_T1w_label-SC_seg.json | 6 +- ...Uhb05_space-other_T2star_label-SC_seg.json | 6 +- ...r_T2star_label-discs_desc-warp_dlabel.json | 12 ++ ...rnoUhb05_space-other_T2w_label-SC_seg.json | 6 +- ...rage_dwi_label-discs_desc-warp_dlabel.json | 9 ++ ...-1_mt-on_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...2_mt-off_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...rnoUhb06_space-other_T1w_label-SC_seg.json | 6 +- ...Uhb06_space-other_T2star_label-SC_seg.json | 6 +- ...r_T2star_label-discs_desc-warp_dlabel.json | 12 ++ ...rnoUhb06_space-other_T2w_label-SC_seg.json | 6 +- ...rage_dwi_label-discs_desc-warp_dlabel.json | 9 ++ ...-1_mt-on_space-other_MTS_label-SC_seg.json | 5 +- ...2_mt-off_space-other_MTS_label-SC_seg.json | 5 +- ...rnoUhb07_space-other_T1w_label-SC_seg.json | 6 +- ...Uhb07_space-other_T2star_label-SC_seg.json | 6 +- ...rnoUhb07_space-other_T2w_label-SC_seg.json | 6 +- ...-1_mt-on_space-other_MTS_label-SC_seg.json | 5 +- ...2_mt-off_space-other_MTS_label-SC_seg.json | 5 +- ...rnoUhb08_space-other_T1w_label-SC_seg.json | 6 +- ...Uhb08_space-other_T2star_label-SC_seg.json | 6 +- ...rnoUhb08_space-other_T2w_label-SC_seg.json | 6 +- ...-1_mt-on_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...2_mt-off_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...ardiff01_space-other_T1w_label-SC_seg.json | 6 +- ...iff01_space-other_T2star_label-SC_seg.json | 6 +- ...r_T2star_label-discs_desc-warp_dlabel.json | 12 ++ ...ardiff01_space-other_T2w_label-SC_seg.json | 6 +- ...rage_dwi_label-discs_desc-warp_dlabel.json | 9 ++ ...-1_mt-on_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...2_mt-off_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...ardiff02_space-other_T1w_label-SC_seg.json | 6 +- ...iff02_space-other_T2star_label-SC_seg.json | 6 +- ...r_T2star_label-discs_desc-warp_dlabel.json | 12 ++ ...ardiff02_space-other_T2w_label-SC_seg.json | 6 +- ...rage_dwi_label-discs_desc-warp_dlabel.json | 9 ++ ...-1_mt-on_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...2_mt-off_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...ardiff03_space-other_T1w_label-SC_seg.json | 6 +- ...iff03_space-other_T2star_label-SC_seg.json | 6 +- ...r_T2star_label-discs_desc-warp_dlabel.json | 12 ++ ...ardiff03_space-other_T2w_label-SC_seg.json | 6 +- ...rage_dwi_label-discs_desc-warp_dlabel.json | 9 ++ ...-1_mt-on_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...2_mt-off_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...ardiff04_space-other_T1w_label-SC_seg.json | 6 +- ...iff04_space-other_T2star_label-SC_seg.json | 6 +- ...r_T2star_label-discs_desc-warp_dlabel.json | 12 ++ ...ardiff04_space-other_T2w_label-SC_seg.json | 6 +- ...rage_dwi_label-discs_desc-warp_dlabel.json | 9 ++ ...-1_mt-on_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...2_mt-off_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...ardiff05_space-other_T1w_label-SC_seg.json | 6 +- ...iff05_space-other_T2star_label-SC_seg.json | 6 +- ...r_T2star_label-discs_desc-warp_dlabel.json | 12 ++ ...ardiff05_space-other_T2w_label-SC_seg.json | 6 +- ...rage_dwi_label-discs_desc-warp_dlabel.json | 9 ++ ...-1_mt-on_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...2_mt-off_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...ardiff06_space-other_T1w_label-SC_seg.json | 6 +- ...iff06_space-other_T2star_label-SC_seg.json | 6 +- ...r_T2star_label-discs_desc-warp_dlabel.json | 12 ++ ...ardiff06_space-other_T2w_label-SC_seg.json | 6 +- ...rage_dwi_label-discs_desc-warp_dlabel.json | 9 ++ ...-1_mt-on_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...2_mt-off_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...-cmrra01_space-other_T1w_label-SC_seg.json | 6 +- ...rra01_space-other_T2star_label-SC_seg.json | 6 +- ...r_T2star_label-discs_desc-warp_dlabel.json | 12 ++ ...-cmrra01_space-other_T2w_label-SC_seg.json | 6 +- ...rage_dwi_label-discs_desc-warp_dlabel.json | 9 ++ ...-1_mt-on_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...2_mt-off_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...-cmrra02_space-other_T1w_label-SC_seg.json | 6 +- ...rra02_space-other_T2star_label-SC_seg.json | 6 +- ...r_T2star_label-discs_desc-warp_dlabel.json | 12 ++ ...-cmrra02_space-other_T2w_label-SC_seg.json | 6 +- ...rage_dwi_label-discs_desc-warp_dlabel.json | 9 ++ ...-1_mt-on_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...2_mt-off_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...-cmrra03_space-other_T1w_label-SC_seg.json | 6 +- ...rra03_space-other_T2star_label-SC_seg.json | 6 +- ...r_T2star_label-discs_desc-warp_dlabel.json | 12 ++ ...-cmrra03_space-other_T2w_label-SC_seg.json | 6 +- ...rage_dwi_label-discs_desc-warp_dlabel.json | 9 ++ ...-1_mt-on_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...2_mt-off_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...-cmrra04_space-other_T1w_label-SC_seg.json | 6 +- ...rra04_space-other_T2star_label-SC_seg.json | 6 +- ...r_T2star_label-discs_desc-warp_dlabel.json | 12 ++ ...-cmrra04_space-other_T2w_label-SC_seg.json | 6 +- ...rage_dwi_label-discs_desc-warp_dlabel.json | 9 ++ ...-1_mt-on_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...2_mt-off_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...-cmrra05_space-other_T1w_label-SC_seg.json | 6 +- ...rra05_space-other_T2star_label-SC_seg.json | 6 +- ...r_T2star_label-discs_desc-warp_dlabel.json | 12 ++ ...-cmrra05_space-other_T2w_label-SC_seg.json | 6 +- ...rage_dwi_label-discs_desc-warp_dlabel.json | 9 ++ ...-1_mt-on_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...2_mt-off_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...-cmrra06_space-other_T1w_label-SC_seg.json | 6 +- ...rra06_space-other_T2star_label-SC_seg.json | 6 +- ...r_T2star_label-discs_desc-warp_dlabel.json | 12 ++ ...-cmrra06_space-other_T2w_label-SC_seg.json | 6 +- ...rage_dwi_label-discs_desc-warp_dlabel.json | 9 ++ ...-1_mt-on_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...2_mt-off_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...-cmrrb01_space-other_T1w_label-SC_seg.json | 6 +- ...rrb01_space-other_T2star_label-SC_seg.json | 6 +- ...r_T2star_label-discs_desc-warp_dlabel.json | 12 ++ ...-cmrrb01_space-other_T2w_label-SC_seg.json | 6 +- ...rage_dwi_label-discs_desc-warp_dlabel.json | 9 ++ ...-1_mt-on_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...2_mt-off_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...-cmrrb02_space-other_T1w_label-SC_seg.json | 6 +- ...rrb02_space-other_T2star_label-SC_seg.json | 6 +- ...r_T2star_label-discs_desc-warp_dlabel.json | 12 ++ ...-cmrrb02_space-other_T2w_label-SC_seg.json | 6 +- ...rage_dwi_label-discs_desc-warp_dlabel.json | 9 ++ ...-1_mt-on_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...2_mt-off_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...-cmrrb03_space-other_T1w_label-SC_seg.json | 6 +- ...rrb03_space-other_T2star_label-SC_seg.json | 6 +- ...r_T2star_label-discs_desc-warp_dlabel.json | 12 ++ ...rrb03_space-other_T2w_csflabel-SC_seg.json | 8 +- ...-cmrrb03_space-other_T2w_label-SC_seg.json | 6 +- ...rage_dwi_label-discs_desc-warp_dlabel.json | 9 ++ ...-1_mt-on_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...2_mt-off_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...-cmrrb04_space-other_T1w_label-SC_seg.json | 6 +- ...rrb04_space-other_T2star_label-SC_seg.json | 6 +- ...r_T2star_label-discs_desc-warp_dlabel.json | 12 ++ ...-cmrrb04_space-other_T2w_label-SC_seg.json | 6 +- ...rage_dwi_label-discs_desc-warp_dlabel.json | 9 ++ ...-1_mt-on_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...2_mt-off_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...-cmrrb05_space-other_T1w_label-SC_seg.json | 6 +- ...rrb05_space-other_T2star_label-SC_seg.json | 6 +- ...r_T2star_label-discs_desc-warp_dlabel.json | 12 ++ ...-cmrrb05_space-other_T2w_label-SC_seg.json | 6 +- ...rage_dwi_label-discs_desc-warp_dlabel.json | 9 ++ ...-1_mt-on_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...2_mt-off_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...-cmrrb06_space-other_T1w_label-SC_seg.json | 6 +- ...rrb06_space-other_T2star_label-SC_seg.json | 6 +- ...r_T2star_label-discs_desc-warp_dlabel.json | 12 ++ ...-cmrrb06_space-other_T2w_label-SC_seg.json | 6 +- ...rage_dwi_label-discs_desc-warp_dlabel.json | 9 ++ ...-1_mt-on_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...2_mt-off_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...-cmrrb07_space-other_T1w_label-SC_seg.json | 6 +- ...rrb07_space-other_T2star_label-SC_seg.json | 6 +- ...r_T2star_label-discs_desc-warp_dlabel.json | 12 ++ ...-cmrrb07_space-other_T2w_label-SC_seg.json | 6 +- ...rage_dwi_label-discs_desc-warp_dlabel.json | 9 ++ ...-1_mt-on_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...2_mt-off_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...resden01_space-other_T1w_label-SC_seg.json | 6 +- ...den01_space-other_T2star_label-SC_seg.json | 6 +- ...r_T2star_label-discs_desc-warp_dlabel.json | 12 ++ ...resden01_space-other_T2w_label-SC_seg.json | 6 +- ...rage_dwi_label-discs_desc-warp_dlabel.json | 9 ++ ...-1_mt-on_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...2_mt-off_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...resden02_space-other_T1w_label-SC_seg.json | 6 +- ...den02_space-other_T2star_label-SC_seg.json | 6 +- ...r_T2star_label-discs_desc-warp_dlabel.json | 12 ++ ...resden02_space-other_T2w_label-SC_seg.json | 6 +- ...rage_dwi_label-discs_desc-warp_dlabel.json | 9 ++ ...-1_mt-on_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...2_mt-off_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...chieva01_space-other_T1w_label-SC_seg.json | 6 +- ...a01_space-other_T2star_gmlabel-SC_seg.json | 6 +- ...eva01_space-other_T2star_label-SC_seg.json | 6 +- ...r_T2star_label-discs_desc-warp_dlabel.json | 12 ++ ...chieva01_space-other_T2w_label-SC_seg.json | 6 +- ...rage_dwi_label-discs_desc-warp_dlabel.json | 9 ++ ...-1_mt-on_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...2_mt-off_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...chieva02_space-other_T1w_label-SC_seg.json | 6 +- ...eva02_space-other_T2star_label-SC_seg.json | 6 +- ...r_T2star_label-discs_desc-warp_dlabel.json | 12 ++ ...chieva02_space-other_T2w_label-SC_seg.json | 6 +- ...rage_dwi_label-discs_desc-warp_dlabel.json | 9 ++ ...-1_mt-on_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...2_mt-off_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...chieva03_space-other_T1w_label-SC_seg.json | 6 +- ...eva03_space-other_T2star_label-SC_seg.json | 6 +- ...r_T2star_label-discs_desc-warp_dlabel.json | 12 ++ ...chieva03_space-other_T2w_label-SC_seg.json | 6 +- ...rage_dwi_label-discs_desc-warp_dlabel.json | 9 ++ ...-1_mt-on_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...2_mt-off_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...chieva04_space-other_T1w_label-SC_seg.json | 6 +- ...a04_space-other_T2star_gmlabel-SC_seg.json | 6 +- ...eva04_space-other_T2star_label-SC_seg.json | 6 +- ...r_T2star_label-discs_desc-warp_dlabel.json | 12 ++ ...chieva04_space-other_T2w_label-SC_seg.json | 6 +- ...rage_dwi_label-discs_desc-warp_dlabel.json | 9 ++ ...-1_mt-on_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...2_mt-off_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...chieva05_space-other_T1w_label-SC_seg.json | 6 +- ...eva05_space-other_T2star_label-SC_seg.json | 6 +- ...r_T2star_label-discs_desc-warp_dlabel.json | 12 ++ ...chieva05_space-other_T2w_label-SC_seg.json | 6 +- ...rage_dwi_label-discs_desc-warp_dlabel.json | 9 ++ ...-1_mt-on_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...2_mt-off_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...chieva06_space-other_T1w_label-SC_seg.json | 6 +- ...eva06_space-other_T2star_label-SC_seg.json | 6 +- ...r_T2star_label-discs_desc-warp_dlabel.json | 12 ++ ...chieva06_space-other_T2w_label-SC_seg.json | 6 +- ...rage_dwi_label-discs_desc-warp_dlabel.json | 9 ++ ...-1_mt-on_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...2_mt-off_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...Prisma01_space-other_T1w_label-SC_seg.json | 6 +- ...sma01_space-other_T2star_label-SC_seg.json | 6 +- ...r_T2star_label-discs_desc-warp_dlabel.json | 12 ++ ...Prisma01_space-other_T2w_label-SC_seg.json | 6 +- ...rage_dwi_label-discs_desc-warp_dlabel.json | 9 ++ ...-1_mt-on_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...2_mt-off_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...Prisma02_space-other_T1w_label-SC_seg.json | 6 +- ...sma02_space-other_T2star_label-SC_seg.json | 6 +- ...r_T2star_label-discs_desc-warp_dlabel.json | 12 ++ ...Prisma02_space-other_T2w_label-SC_seg.json | 6 +- ...rage_dwi_label-discs_desc-warp_dlabel.json | 9 ++ ...-1_mt-on_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...2_mt-off_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...Prisma03_space-other_T1w_label-SC_seg.json | 6 +- ...sma03_space-other_T2star_label-SC_seg.json | 6 +- ...r_T2star_label-discs_desc-warp_dlabel.json | 12 ++ ...Prisma03_space-other_T2w_label-SC_seg.json | 6 +- ...rage_dwi_label-discs_desc-warp_dlabel.json | 9 ++ ...-1_mt-on_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...2_mt-off_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...Prisma04_space-other_T1w_label-SC_seg.json | 6 +- ...sma04_space-other_T2star_label-SC_seg.json | 6 +- ...r_T2star_label-discs_desc-warp_dlabel.json | 12 ++ ...Prisma04_space-other_T2w_label-SC_seg.json | 6 +- ...rage_dwi_label-discs_desc-warp_dlabel.json | 9 ++ ...-1_mt-on_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...2_mt-off_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...Prisma05_space-other_T1w_label-SC_seg.json | 6 +- ...sma05_space-other_T2star_label-SC_seg.json | 6 +- ...r_T2star_label-discs_desc-warp_dlabel.json | 12 ++ ...Prisma05_space-other_T2w_label-SC_seg.json | 6 +- ...rage_dwi_label-discs_desc-warp_dlabel.json | 9 ++ ...-1_mt-on_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...2_mt-off_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...Prisma06_space-other_T1w_label-SC_seg.json | 6 +- ...sma06_space-other_T2star_label-SC_seg.json | 6 +- ...r_T2star_label-discs_desc-warp_dlabel.json | 12 ++ ...Prisma06_space-other_T2w_label-SC_seg.json | 6 +- ...rage_dwi_label-discs_desc-warp_dlabel.json | 9 ++ ...-1_mt-on_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...2_mt-off_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...geneva01_space-other_T1w_label-SC_seg.json | 6 +- ...eva01_space-other_T2star_label-SC_seg.json | 6 +- ...r_T2star_label-discs_desc-warp_dlabel.json | 12 ++ ...geneva01_space-other_T2w_label-SC_seg.json | 6 +- ...rage_dwi_label-discs_desc-warp_dlabel.json | 9 ++ ...-1_mt-on_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...2_mt-off_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...geneva02_space-other_T1w_label-SC_seg.json | 6 +- ...eva02_space-other_T2star_label-SC_seg.json | 6 +- ...r_T2star_label-discs_desc-warp_dlabel.json | 12 ++ ...geneva02_space-other_T2w_label-SC_seg.json | 6 +- ...rage_dwi_label-discs_desc-warp_dlabel.json | 9 ++ ...-1_mt-on_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...2_mt-off_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...geneva03_space-other_T1w_label-SC_seg.json | 6 +- ...eva03_space-other_T2star_label-SC_seg.json | 6 +- ...r_T2star_label-discs_desc-warp_dlabel.json | 12 ++ ...geneva03_space-other_T2w_label-SC_seg.json | 6 +- ...rage_dwi_label-discs_desc-warp_dlabel.json | 9 ++ ...-1_mt-on_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...2_mt-off_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...geneva04_space-other_T1w_label-SC_seg.json | 6 +- ...eva04_space-other_T2star_label-SC_seg.json | 6 +- ...r_T2star_label-discs_desc-warp_dlabel.json | 12 ++ ...eva04_space-other_T2w_csflabel-SC_seg.json | 8 +- ...geneva04_space-other_T2w_label-SC_seg.json | 6 +- ...rage_dwi_label-discs_desc-warp_dlabel.json | 9 ++ ...-1_mt-on_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...2_mt-off_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...geneva05_space-other_T1w_label-SC_seg.json | 6 +- ...eva05_space-other_T2star_label-SC_seg.json | 6 +- ...r_T2star_label-discs_desc-warp_dlabel.json | 12 ++ ...geneva05_space-other_T2w_label-SC_seg.json | 6 +- ...rage_dwi_label-discs_desc-warp_dlabel.json | 9 ++ ...-1_mt-on_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...2_mt-off_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...geneva06_space-other_T1w_label-SC_seg.json | 6 +- ...eva06_space-other_T2star_label-SC_seg.json | 6 +- ...r_T2star_label-discs_desc-warp_dlabel.json | 12 ++ ...geneva06_space-other_T2w_label-SC_seg.json | 6 +- ...rage_dwi_label-discs_desc-warp_dlabel.json | 9 ++ ...-1_mt-on_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...2_mt-off_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...amburg01_space-other_T1w_label-SC_seg.json | 6 +- ...urg01_space-other_T2star_label-SC_seg.json | 6 +- ...r_T2star_label-discs_desc-warp_dlabel.json | 12 ++ ...amburg01_space-other_T2w_label-SC_seg.json | 6 +- ...rage_dwi_label-discs_desc-warp_dlabel.json | 9 ++ ...-1_mt-on_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...2_mt-off_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...amburg02_space-other_T1w_label-SC_seg.json | 6 +- ...urg02_space-other_T2star_label-SC_seg.json | 6 +- ...r_T2star_label-discs_desc-warp_dlabel.json | 12 ++ ...amburg02_space-other_T2w_label-SC_seg.json | 6 +- ...rage_dwi_label-discs_desc-warp_dlabel.json | 9 ++ ...-1_mt-on_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...2_mt-off_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...amburg03_space-other_T1w_label-SC_seg.json | 6 +- ...urg03_space-other_T2star_label-SC_seg.json | 6 +- ...r_T2star_label-discs_desc-warp_dlabel.json | 12 ++ ...amburg03_space-other_T2w_label-SC_seg.json | 6 +- ...rage_dwi_label-discs_desc-warp_dlabel.json | 9 ++ ...-1_mt-on_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...2_mt-off_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...amburg04_space-other_T1w_label-SC_seg.json | 6 +- ...urg04_space-other_T2star_label-SC_seg.json | 6 +- ...r_T2star_label-discs_desc-warp_dlabel.json | 12 ++ ...amburg04_space-other_T2w_label-SC_seg.json | 6 +- ...rage_dwi_label-discs_desc-warp_dlabel.json | 9 ++ ...-1_mt-on_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...2_mt-off_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...amburg05_space-other_T1w_label-SC_seg.json | 6 +- ...urg05_space-other_T2star_label-SC_seg.json | 6 +- ...r_T2star_label-discs_desc-warp_dlabel.json | 12 ++ ...amburg05_space-other_T2w_label-SC_seg.json | 6 +- ...rage_dwi_label-discs_desc-warp_dlabel.json | 9 ++ ...-1_mt-on_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...2_mt-off_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...amburg06_space-other_T1w_label-SC_seg.json | 6 +- ...urg06_space-other_T2star_label-SC_seg.json | 6 +- ...r_T2star_label-discs_desc-warp_dlabel.json | 12 ++ ...amburg06_space-other_T2w_label-SC_seg.json | 6 +- ...rage_dwi_label-discs_desc-warp_dlabel.json | 9 ++ ...-1_mt-on_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...2_mt-off_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...do750w01_space-other_T1w_label-SC_seg.json | 6 +- ...50w01_space-other_T2star_label-SC_seg.json | 6 +- ...r_T2star_label-discs_desc-warp_dlabel.json | 12 ++ ...do750w01_space-other_T2w_label-SC_seg.json | 6 +- ...rage_dwi_label-discs_desc-warp_dlabel.json | 9 ++ ...-1_mt-on_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...2_mt-off_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...do750w02_space-other_T1w_label-SC_seg.json | 6 +- ...50w02_space-other_T2star_label-SC_seg.json | 6 +- ...r_T2star_label-discs_desc-warp_dlabel.json | 12 ++ ...do750w02_space-other_T2w_label-SC_seg.json | 6 +- ...rage_dwi_label-discs_desc-warp_dlabel.json | 9 ++ ...-1_mt-on_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...2_mt-off_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...do750w03_space-other_T1w_label-SC_seg.json | 6 +- ...50w03_space-other_T2star_label-SC_seg.json | 6 +- ...r_T2star_label-discs_desc-warp_dlabel.json | 12 ++ ...do750w03_space-other_T2w_label-SC_seg.json | 6 +- ...rage_dwi_label-discs_desc-warp_dlabel.json | 9 ++ ...-1_mt-on_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...2_mt-off_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...do750w04_space-other_T1w_label-SC_seg.json | 6 +- ...50w04_space-other_T2star_label-SC_seg.json | 6 +- ...r_T2star_label-discs_desc-warp_dlabel.json | 12 ++ ...do750w04_space-other_T2w_label-SC_seg.json | 6 +- ...rage_dwi_label-discs_desc-warp_dlabel.json | 9 ++ ...-1_mt-on_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...2_mt-off_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...do750w05_space-other_T1w_label-SC_seg.json | 6 +- ...50w05_space-other_T2star_label-SC_seg.json | 6 +- ...r_T2star_label-discs_desc-warp_dlabel.json | 12 ++ ...do750w05_space-other_T2w_label-SC_seg.json | 6 +- ...rage_dwi_label-discs_desc-warp_dlabel.json | 9 ++ ...-1_mt-on_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...2_mt-off_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...do750w06_space-other_T1w_label-SC_seg.json | 6 +- ...50w06_space-other_T2star_label-SC_seg.json | 6 +- ...r_T2star_label-discs_desc-warp_dlabel.json | 12 ++ ...do750w06_space-other_T2w_label-SC_seg.json | 6 +- ...rage_dwi_label-discs_desc-warp_dlabel.json | 9 ++ ...-1_mt-on_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...2_mt-off_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...ub-mgh01_space-other_T1w_label-SC_seg.json | 6 +- ...mgh01_space-other_T2star_label-SC_seg.json | 6 +- ...r_T2star_label-discs_desc-warp_dlabel.json | 12 ++ ...ub-mgh01_space-other_T2w_label-SC_seg.json | 6 +- ...rage_dwi_label-discs_desc-warp_dlabel.json | 9 ++ ...-1_mt-on_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...2_mt-off_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...ub-mgh02_space-other_T1w_label-SC_seg.json | 6 +- ...mgh02_space-other_T2star_label-SC_seg.json | 6 +- ...r_T2star_label-discs_desc-warp_dlabel.json | 12 ++ ...ub-mgh02_space-other_T2w_label-SC_seg.json | 6 +- ...rage_dwi_label-discs_desc-warp_dlabel.json | 9 ++ ...-1_mt-on_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...2_mt-off_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...ub-mgh03_space-other_T1w_label-SC_seg.json | 6 +- ...mgh03_space-other_T2star_label-SC_seg.json | 6 +- ...r_T2star_label-discs_desc-warp_dlabel.json | 12 ++ ...ub-mgh03_space-other_T2w_label-SC_seg.json | 6 +- ...rage_dwi_label-discs_desc-warp_dlabel.json | 9 ++ ...-1_mt-on_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...2_mt-off_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...ub-mgh04_space-other_T1w_label-SC_seg.json | 6 +- ...mgh04_space-other_T2star_label-SC_seg.json | 6 +- ...r_T2star_label-discs_desc-warp_dlabel.json | 12 ++ ...ub-mgh04_space-other_T2w_label-SC_seg.json | 6 +- ...rage_dwi_label-discs_desc-warp_dlabel.json | 9 ++ ...-1_mt-on_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...2_mt-off_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...ub-mgh05_space-other_T1w_label-SC_seg.json | 6 +- ...mgh05_space-other_T2star_label-SC_seg.json | 6 +- ...r_T2star_label-discs_desc-warp_dlabel.json | 12 ++ ...ub-mgh05_space-other_T2w_label-SC_seg.json | 6 +- ...rage_dwi_label-discs_desc-warp_dlabel.json | 9 ++ ...-1_mt-on_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...2_mt-off_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...ub-mgh06_space-other_T1w_label-SC_seg.json | 6 +- ...mgh06_space-other_T2star_label-SC_seg.json | 6 +- ...r_T2star_label-discs_desc-warp_dlabel.json | 12 ++ ...ub-mgh06_space-other_T2w_label-SC_seg.json | 6 +- ...rage_dwi_label-discs_desc-warp_dlabel.json | 9 ++ ...-1_mt-on_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...2_mt-off_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...-milan01_space-other_T1w_label-SC_seg.json | 6 +- ...lan01_space-other_T2star_label-SC_seg.json | 6 +- ...r_T2star_label-discs_desc-warp_dlabel.json | 12 ++ ...-milan01_space-other_T2w_label-SC_seg.json | 6 +- ...rage_dwi_label-discs_desc-warp_dlabel.json | 9 ++ ...-1_mt-on_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...2_mt-off_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...-milan02_space-other_T1w_label-SC_seg.json | 6 +- ...lan02_space-other_T2star_label-SC_seg.json | 6 +- ...r_T2star_label-discs_desc-warp_dlabel.json | 12 ++ ...-milan02_space-other_T2w_label-SC_seg.json | 6 +- ...rage_dwi_label-discs_desc-warp_dlabel.json | 9 ++ ...-1_mt-on_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...2_mt-off_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...-milan03_space-other_T1w_label-SC_seg.json | 6 +- ...lan03_space-other_T2star_label-SC_seg.json | 6 +- ...r_T2star_label-discs_desc-warp_dlabel.json | 12 ++ ...-milan03_space-other_T2w_label-SC_seg.json | 6 +- ...rage_dwi_label-discs_desc-warp_dlabel.json | 9 ++ ...-1_mt-on_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...2_mt-off_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...-milan04_space-other_T1w_label-SC_seg.json | 6 +- ...lan04_space-other_T2star_label-SC_seg.json | 6 +- ...r_T2star_label-discs_desc-warp_dlabel.json | 12 ++ ...-milan04_space-other_T2w_label-SC_seg.json | 6 +- ...rage_dwi_label-discs_desc-warp_dlabel.json | 9 ++ ...-1_mt-on_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...2_mt-off_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...-milan05_space-other_T1w_label-SC_seg.json | 6 +- ...lan05_space-other_T2star_label-SC_seg.json | 6 +- ...r_T2star_label-discs_desc-warp_dlabel.json | 12 ++ ...-milan05_space-other_T2w_label-SC_seg.json | 6 +- ...rage_dwi_label-discs_desc-warp_dlabel.json | 9 ++ ...-1_mt-on_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...2_mt-off_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...-milan06_space-other_T1w_label-SC_seg.json | 6 +- ...lan06_space-other_T2star_label-SC_seg.json | 6 +- ...r_T2star_label-discs_desc-warp_dlabel.json | 12 ++ ...-milan06_space-other_T2w_label-SC_seg.json | 6 +- ...rage_dwi_label-discs_desc-warp_dlabel.json | 9 ++ ...-1_mt-on_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...2_mt-off_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...-milan07_space-other_T1w_label-SC_seg.json | 6 +- ...lan07_space-other_T2star_label-SC_seg.json | 6 +- ...r_T2star_label-discs_desc-warp_dlabel.json | 12 ++ ...-milan07_space-other_T2w_label-SC_seg.json | 6 +- ...rage_dwi_label-discs_desc-warp_dlabel.json | 9 ++ ...-1_mt-on_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...2_mt-off_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...niPilot1_space-other_T1w_label-SC_seg.json | 6 +- ...ilot1_space-other_T2star_label-SC_seg.json | 6 +- ...r_T2star_label-discs_desc-warp_dlabel.json | 12 ++ ...niPilot1_space-other_T2w_label-SC_seg.json | 6 +- ...rage_dwi_label-discs_desc-warp_dlabel.json | 9 ++ ...-1_mt-on_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...2_mt-off_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...b-mniS01_space-other_T1w_label-SC_seg.json | 6 +- ...niS01_space-other_T2star_label-SC_seg.json | 6 +- ...r_T2star_label-discs_desc-warp_dlabel.json | 12 ++ ...b-mniS01_space-other_T2w_label-SC_seg.json | 6 +- ...rage_dwi_label-discs_desc-warp_dlabel.json | 9 ++ ...-1_mt-on_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...2_mt-off_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...b-mniS02_space-other_T1w_label-SC_seg.json | 6 +- ...niS02_space-other_T2star_label-SC_seg.json | 6 +- ...r_T2star_label-discs_desc-warp_dlabel.json | 12 ++ ...b-mniS02_space-other_T2w_label-SC_seg.json | 6 +- ...rage_dwi_label-discs_desc-warp_dlabel.json | 9 ++ ...-1_mt-on_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...2_mt-off_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...b-mniS03_space-other_T1w_label-SC_seg.json | 6 +- ...niS03_space-other_T2star_label-SC_seg.json | 6 +- ...r_T2star_label-discs_desc-warp_dlabel.json | 12 ++ ...b-mniS03_space-other_T2w_label-SC_seg.json | 6 +- ...rage_dwi_label-discs_desc-warp_dlabel.json | 9 ++ ...-1_mt-on_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...2_mt-off_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...b-mniS04_space-other_T1w_label-SC_seg.json | 6 +- ...niS04_space-other_T2star_label-SC_seg.json | 6 +- ...r_T2star_label-discs_desc-warp_dlabel.json | 12 ++ ...b-mniS04_space-other_T2w_label-SC_seg.json | 6 +- ...rage_dwi_label-discs_desc-warp_dlabel.json | 9 ++ ...-1_mt-on_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...2_mt-off_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...b-mniS05_space-other_T1w_label-SC_seg.json | 6 +- ...S05_space-other_T2star_gmlabel-SC_seg.json | 6 +- ...niS05_space-other_T2star_label-SC_seg.json | 6 +- ...r_T2star_label-discs_desc-warp_dlabel.json | 12 ++ ...b-mniS05_space-other_T2w_label-SC_seg.json | 6 +- ...rage_dwi_label-discs_desc-warp_dlabel.json | 9 ++ ...-1_mt-on_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...2_mt-off_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...b-mniS06_space-other_T1w_label-SC_seg.json | 6 +- ...niS06_space-other_T2star_label-SC_seg.json | 6 +- ...r_T2star_label-discs_desc-warp_dlabel.json | 12 ++ ...b-mniS06_space-other_T2w_label-SC_seg.json | 6 +- ...rage_dwi_label-discs_desc-warp_dlabel.json | 9 ++ ...-1_mt-on_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...2_mt-off_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...b-mniS07_space-other_T1w_label-SC_seg.json | 6 +- ...niS07_space-other_T2star_label-SC_seg.json | 6 +- ...r_T2star_label-discs_desc-warp_dlabel.json | 12 ++ ...b-mniS07_space-other_T2w_label-SC_seg.json | 6 +- ...rage_dwi_label-discs_desc-warp_dlabel.json | 9 ++ ...-1_mt-on_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...2_mt-off_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...b-mniS08_space-other_T1w_label-SC_seg.json | 6 +- ...niS08_space-other_T2star_label-SC_seg.json | 6 +- ...r_T2star_label-discs_desc-warp_dlabel.json | 12 ++ ...b-mniS08_space-other_T2w_label-SC_seg.json | 6 +- ...rage_dwi_label-discs_desc-warp_dlabel.json | 9 ++ ...-1_mt-on_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...2_mt-off_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...b-mniS09_space-other_T1w_label-SC_seg.json | 6 +- ...niS09_space-other_T2star_label-SC_seg.json | 6 +- ...r_T2star_label-discs_desc-warp_dlabel.json | 12 ++ ...b-mniS09_space-other_T2w_label-SC_seg.json | 6 +- ...rage_dwi_label-discs_desc-warp_dlabel.json | 9 ++ ...-1_mt-on_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...2_mt-off_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...tSinai01_space-other_T1w_label-SC_seg.json | 6 +- ...nai01_space-other_T2star_label-SC_seg.json | 6 +- ...r_T2star_label-discs_desc-warp_dlabel.json | 12 ++ ...tSinai01_space-other_T2w_label-SC_seg.json | 6 +- ...rage_dwi_label-discs_desc-warp_dlabel.json | 9 ++ ...-1_mt-on_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...2_mt-off_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...tSinai02_space-other_T1w_label-SC_seg.json | 6 +- ...nai02_space-other_T2star_label-SC_seg.json | 6 +- ...r_T2star_label-discs_desc-warp_dlabel.json | 12 ++ ...tSinai02_space-other_T2w_label-SC_seg.json | 6 +- ...rage_dwi_label-discs_desc-warp_dlabel.json | 9 ++ ...-1_mt-on_space-other_MTS_label-SC_seg.json | 5 +- ...2_mt-off_space-other_MTS_label-SC_seg.json | 5 +- ...tSinai03_space-other_T1w_label-SC_seg.json | 6 +- ...nai03_space-other_T2star_label-SC_seg.json | 6 +- ...tSinai03_space-other_T2w_label-SC_seg.json | 6 +- ...-1_mt-on_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...2_mt-off_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...tSinai04_space-other_T1w_label-SC_seg.json | 6 +- ...nai04_space-other_T2star_label-SC_seg.json | 6 +- ...r_T2star_label-discs_desc-warp_dlabel.json | 12 ++ ...tSinai04_space-other_T2w_label-SC_seg.json | 6 +- ...rage_dwi_label-discs_desc-warp_dlabel.json | 9 ++ ...-1_mt-on_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...2_mt-off_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...tSinai05_space-other_T1w_label-SC_seg.json | 6 +- ...nai05_space-other_T2star_label-SC_seg.json | 6 +- ...r_T2star_label-discs_desc-warp_dlabel.json | 12 ++ ...tSinai05_space-other_T2w_label-SC_seg.json | 6 +- ...rage_dwi_label-discs_desc-warp_dlabel.json | 9 ++ ...-1_mt-on_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...2_mt-off_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...tSinai06_space-other_T1w_label-SC_seg.json | 6 +- ...nai06_space-other_T2star_label-SC_seg.json | 6 +- ...r_T2star_label-discs_desc-warp_dlabel.json | 12 ++ ...tSinai06_space-other_T2w_label-SC_seg.json | 6 +- ...rage_dwi_label-discs_desc-warp_dlabel.json | 9 ++ ...-1_mt-on_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...2_mt-off_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...mpicbs01_space-other_T1w_label-SC_seg.json | 6 +- ...cbs01_space-other_T2star_label-SC_seg.json | 6 +- ...r_T2star_label-discs_desc-warp_dlabel.json | 12 ++ ...mpicbs01_space-other_T2w_label-SC_seg.json | 6 +- ...rage_dwi_label-discs_desc-warp_dlabel.json | 9 ++ ...-1_mt-on_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...2_mt-off_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...mpicbs02_space-other_T1w_label-SC_seg.json | 6 +- ...cbs02_space-other_T2star_label-SC_seg.json | 6 +- ...r_T2star_label-discs_desc-warp_dlabel.json | 12 ++ ...mpicbs02_space-other_T2w_label-SC_seg.json | 6 +- ...rage_dwi_label-discs_desc-warp_dlabel.json | 9 ++ ...-1_mt-on_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...2_mt-off_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...mpicbs03_space-other_T1w_label-SC_seg.json | 6 +- ...cbs03_space-other_T2star_label-SC_seg.json | 6 +- ...r_T2star_label-discs_desc-warp_dlabel.json | 12 ++ ...mpicbs03_space-other_T2w_label-SC_seg.json | 6 +- ...rage_dwi_label-discs_desc-warp_dlabel.json | 9 ++ ...-1_mt-on_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...2_mt-off_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...mpicbs05_space-other_T1w_label-SC_seg.json | 6 +- ...cbs05_space-other_T2star_label-SC_seg.json | 6 +- ...r_T2star_label-discs_desc-warp_dlabel.json | 12 ++ ...mpicbs05_space-other_T2w_label-SC_seg.json | 6 +- ...rage_dwi_label-discs_desc-warp_dlabel.json | 9 ++ ...-1_mt-on_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...2_mt-off_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...mpicbs06_space-other_T1w_label-SC_seg.json | 6 +- ...cbs06_space-other_T2star_label-SC_seg.json | 6 +- ...r_T2star_label-discs_desc-warp_dlabel.json | 12 ++ ...mpicbs06_space-other_T2w_label-SC_seg.json | 6 +- ...rage_dwi_label-discs_desc-warp_dlabel.json | 9 ++ ...-1_mt-on_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...2_mt-off_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...mpicbs07_space-other_T1w_label-SC_seg.json | 6 +- ...cbs07_space-other_T2star_label-SC_seg.json | 6 +- ...r_T2star_label-discs_desc-warp_dlabel.json | 12 ++ ...mpicbs07_space-other_T2w_label-SC_seg.json | 6 +- ...rage_dwi_label-discs_desc-warp_dlabel.json | 9 ++ ...-1_mt-on_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...2_mt-off_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...ottwil01_space-other_T1w_label-SC_seg.json | 6 +- ...l01_space-other_T2star_gmlabel-SC_seg.json | 6 +- ...wil01_space-other_T2star_label-SC_seg.json | 6 +- ...r_T2star_label-discs_desc-warp_dlabel.json | 12 ++ ...wil01_space-other_T2w_csflabel-SC_seg.json | 8 +- ...ottwil01_space-other_T2w_label-SC_seg.json | 6 +- ...rage_dwi_label-discs_desc-warp_dlabel.json | 9 ++ ...-1_mt-on_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...2_mt-off_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...ottwil02_space-other_T1w_label-SC_seg.json | 6 +- ...wil02_space-other_T2star_label-SC_seg.json | 6 +- ...r_T2star_label-discs_desc-warp_dlabel.json | 12 ++ ...ottwil02_space-other_T2w_label-SC_seg.json | 6 +- ...rage_dwi_label-discs_desc-warp_dlabel.json | 9 ++ ...-1_mt-on_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...2_mt-off_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...ottwil03_space-other_T1w_label-SC_seg.json | 6 +- ...l03_space-other_T2star_gmlabel-SC_seg.json | 6 +- ...wil03_space-other_T2star_label-SC_seg.json | 6 +- ...r_T2star_label-discs_desc-warp_dlabel.json | 12 ++ ...wil03_space-other_T2w_csflabel-SC_seg.json | 8 +- ...ottwil03_space-other_T2w_label-SC_seg.json | 6 +- ...rage_dwi_label-discs_desc-warp_dlabel.json | 9 ++ ...-1_mt-on_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...2_mt-off_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...ottwil04_space-other_T1w_label-SC_seg.json | 6 +- ...wil04_space-other_T2star_label-SC_seg.json | 6 +- ...r_T2star_label-discs_desc-warp_dlabel.json | 12 ++ ...wil04_space-other_T2w_csflabel-SC_seg.json | 8 +- ...ottwil04_space-other_T2w_label-SC_seg.json | 6 +- ...rage_dwi_label-discs_desc-warp_dlabel.json | 9 ++ ...-1_mt-on_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...2_mt-off_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...ottwil05_space-other_T1w_label-SC_seg.json | 6 +- ...wil05_space-other_T2star_label-SC_seg.json | 6 +- ...r_T2star_label-discs_desc-warp_dlabel.json | 12 ++ ...ottwil05_space-other_T2w_label-SC_seg.json | 6 +- ...rage_dwi_label-discs_desc-warp_dlabel.json | 9 ++ ...-1_mt-on_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...2_mt-off_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...ottwil06_space-other_T1w_label-SC_seg.json | 6 +- ...wil06_space-other_T2star_label-SC_seg.json | 6 +- ...r_T2star_label-discs_desc-warp_dlabel.json | 12 ++ ...ottwil06_space-other_T2w_label-SC_seg.json | 6 +- ...rage_dwi_label-discs_desc-warp_dlabel.json | 9 ++ ...-1_mt-on_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...2_mt-off_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...ub-nwu01_space-other_T1w_label-SC_seg.json | 6 +- ...nwu01_space-other_T2star_label-SC_seg.json | 6 +- ...r_T2star_label-discs_desc-warp_dlabel.json | 12 ++ ...ub-nwu01_space-other_T2w_label-SC_seg.json | 6 +- ...rage_dwi_label-discs_desc-warp_dlabel.json | 9 ++ ...-1_mt-on_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...2_mt-off_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...ub-nwu02_space-other_T1w_label-SC_seg.json | 6 +- ...nwu02_space-other_T2star_label-SC_seg.json | 6 +- ...r_T2star_label-discs_desc-warp_dlabel.json | 12 ++ ...ub-nwu02_space-other_T2w_label-SC_seg.json | 6 +- ...rage_dwi_label-discs_desc-warp_dlabel.json | 9 ++ ...-1_mt-on_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...2_mt-off_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...ub-nwu03_space-other_T1w_label-SC_seg.json | 6 +- ...nwu03_space-other_T2star_label-SC_seg.json | 6 +- ...r_T2star_label-discs_desc-warp_dlabel.json | 12 ++ ...ub-nwu03_space-other_T2w_label-SC_seg.json | 6 +- ...rage_dwi_label-discs_desc-warp_dlabel.json | 9 ++ ...-1_mt-on_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...2_mt-off_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...ub-nwu04_space-other_T1w_label-SC_seg.json | 6 +- ...nwu04_space-other_T2star_label-SC_seg.json | 6 +- ...r_T2star_label-discs_desc-warp_dlabel.json | 12 ++ ...ub-nwu04_space-other_T2w_label-SC_seg.json | 6 +- ...rage_dwi_label-discs_desc-warp_dlabel.json | 9 ++ ...-1_mt-on_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...2_mt-off_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...ub-nwu05_space-other_T1w_label-SC_seg.json | 6 +- ...nwu05_space-other_T2star_label-SC_seg.json | 6 +- ...r_T2star_label-discs_desc-warp_dlabel.json | 12 ++ ...ub-nwu05_space-other_T2w_label-SC_seg.json | 6 +- ...rage_dwi_label-discs_desc-warp_dlabel.json | 9 ++ ...-1_mt-on_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...2_mt-off_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...ub-nwu06_space-other_T1w_label-SC_seg.json | 6 +- ...nwu06_space-other_T2star_label-SC_seg.json | 6 +- ...r_T2star_label-discs_desc-warp_dlabel.json | 12 ++ ...ub-nwu06_space-other_T2w_label-SC_seg.json | 6 +- ...rage_dwi_label-discs_desc-warp_dlabel.json | 9 ++ ...-1_mt-on_space-other_MTS_label-SC_seg.json | 5 +- ...2_mt-off_space-other_MTS_label-SC_seg.json | 5 +- ...dFmrib01_space-other_T1w_label-SC_seg.json | 6 +- ...rib01_space-other_T2star_label-SC_seg.json | 6 +- ...dFmrib01_space-other_T2w_label-SC_seg.json | 6 +- ...-1_mt-on_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...2_mt-off_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...dFmrib02_space-other_T1w_label-SC_seg.json | 6 +- ...rib02_space-other_T2star_label-SC_seg.json | 6 +- ...r_T2star_label-discs_desc-warp_dlabel.json | 12 ++ ...dFmrib02_space-other_T2w_label-SC_seg.json | 6 +- ...rage_dwi_label-discs_desc-warp_dlabel.json | 9 ++ ...-1_mt-on_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...2_mt-off_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...dFmrib03_space-other_T1w_label-SC_seg.json | 6 +- ...rib03_space-other_T2star_label-SC_seg.json | 6 +- ...r_T2star_label-discs_desc-warp_dlabel.json | 12 ++ ...dFmrib03_space-other_T2w_label-SC_seg.json | 6 +- ...rage_dwi_label-discs_desc-warp_dlabel.json | 9 ++ ...-1_mt-on_space-other_MTS_label-SC_seg.json | 5 +- ...2_mt-off_space-other_MTS_label-SC_seg.json | 5 +- ...dFmrib04_space-other_T1w_label-SC_seg.json | 6 +- ...rib04_space-other_T2star_label-SC_seg.json | 6 +- ...dFmrib04_space-other_T2w_label-SC_seg.json | 6 +- ...-1_mt-on_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...2_mt-off_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...dFmrib05_space-other_T1w_label-SC_seg.json | 6 +- ...rib05_space-other_T2star_label-SC_seg.json | 6 +- ...r_T2star_label-discs_desc-warp_dlabel.json | 12 ++ ...dFmrib05_space-other_T2w_label-SC_seg.json | 6 +- ...rage_dwi_label-discs_desc-warp_dlabel.json | 9 ++ ...-1_mt-on_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...2_mt-off_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...dFmrib06_space-other_T1w_label-SC_seg.json | 6 +- ...rib06_space-other_T2star_label-SC_seg.json | 6 +- ...r_T2star_label-discs_desc-warp_dlabel.json | 12 ++ ...dFmrib06_space-other_T2w_label-SC_seg.json | 6 +- ...rage_dwi_label-discs_desc-warp_dlabel.json | 9 ++ ...-1_mt-on_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...2_mt-off_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...dFmrib07_space-other_T1w_label-SC_seg.json | 6 +- ...rib07_space-other_T2star_label-SC_seg.json | 6 +- ...r_T2star_label-discs_desc-warp_dlabel.json | 12 ++ ...dFmrib07_space-other_T2w_label-SC_seg.json | 6 +- ...rage_dwi_label-discs_desc-warp_dlabel.json | 9 ++ ...-1_mt-on_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...2_mt-off_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...dFmrib08_space-other_T1w_label-SC_seg.json | 6 +- ...rib08_space-other_T2star_label-SC_seg.json | 6 +- ...r_T2star_label-discs_desc-warp_dlabel.json | 12 ++ ...dFmrib08_space-other_T2w_label-SC_seg.json | 6 +- ...rage_dwi_label-discs_desc-warp_dlabel.json | 9 ++ ...-1_mt-on_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...2_mt-off_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...dFmrib09_space-other_T1w_label-SC_seg.json | 6 +- ...rib09_space-other_T2star_label-SC_seg.json | 6 +- ...r_T2star_label-discs_desc-warp_dlabel.json | 12 ++ ...dFmrib09_space-other_T2w_label-SC_seg.json | 6 +- ...rage_dwi_label-discs_desc-warp_dlabel.json | 9 ++ ...-1_mt-on_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...2_mt-off_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...dFmrib10_space-other_T1w_label-SC_seg.json | 6 +- ...rib10_space-other_T2star_label-SC_seg.json | 6 +- ...r_T2star_label-discs_desc-warp_dlabel.json | 12 ++ ...dFmrib10_space-other_T2w_label-SC_seg.json | 6 +- ...rage_dwi_label-discs_desc-warp_dlabel.json | 9 ++ ...-1_mt-on_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...2_mt-off_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...dFmrib11_space-other_T1w_label-SC_seg.json | 6 +- ...rib11_space-other_T2star_label-SC_seg.json | 6 +- ...r_T2star_label-discs_desc-warp_dlabel.json | 12 ++ ...dFmrib11_space-other_T2w_label-SC_seg.json | 6 +- ...rage_dwi_label-discs_desc-warp_dlabel.json | 9 ++ ...-1_mt-on_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...2_mt-off_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...rdOhba01_space-other_T1w_label-SC_seg.json | 6 +- ...hba01_space-other_T2star_label-SC_seg.json | 6 +- ...r_T2star_label-discs_desc-warp_dlabel.json | 12 ++ ...rdOhba01_space-other_T2w_label-SC_seg.json | 6 +- ...rage_dwi_label-discs_desc-warp_dlabel.json | 9 ++ ...-1_mt-on_space-other_MTS_label-SC_seg.json | 5 +- ...2_mt-off_space-other_MTS_label-SC_seg.json | 5 +- ...rdOhba02_space-other_T1w_label-SC_seg.json | 6 +- ...hba02_space-other_T2star_label-SC_seg.json | 6 +- ...rdOhba02_space-other_T2w_label-SC_seg.json | 6 +- ...-1_mt-on_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...2_mt-off_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...rdOhba03_space-other_T1w_label-SC_seg.json | 6 +- ...hba03_space-other_T2star_label-SC_seg.json | 6 +- ...r_T2star_label-discs_desc-warp_dlabel.json | 12 ++ ...rdOhba03_space-other_T2w_label-SC_seg.json | 6 +- ...rage_dwi_label-discs_desc-warp_dlabel.json | 9 ++ ...-1_mt-on_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...2_mt-off_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...rdOhba04_space-other_T1w_label-SC_seg.json | 6 +- ...hba04_space-other_T2star_label-SC_seg.json | 6 +- ...r_T2star_label-discs_desc-warp_dlabel.json | 12 ++ ...rdOhba04_space-other_T2w_label-SC_seg.json | 6 +- ...rage_dwi_label-discs_desc-warp_dlabel.json | 9 ++ ...-1_mt-on_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...2_mt-off_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...rdOhba05_space-other_T1w_label-SC_seg.json | 6 +- ...hba05_space-other_T2star_label-SC_seg.json | 6 +- ...r_T2star_label-discs_desc-warp_dlabel.json | 12 ++ ...rdOhba05_space-other_T2w_label-SC_seg.json | 6 +- ...rage_dwi_label-discs_desc-warp_dlabel.json | 9 ++ ...-1_mt-on_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...2_mt-off_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...-pavia01_space-other_T1w_label-SC_seg.json | 6 +- ...via01_space-other_T2star_label-SC_seg.json | 6 +- ...r_T2star_label-discs_desc-warp_dlabel.json | 12 ++ ...-pavia01_space-other_T2w_label-SC_seg.json | 6 +- ...rage_dwi_label-discs_desc-warp_dlabel.json | 9 ++ ...-1_mt-on_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...2_mt-off_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...-pavia02_space-other_T1w_label-SC_seg.json | 6 +- ...via02_space-other_T2star_label-SC_seg.json | 6 +- ...r_T2star_label-discs_desc-warp_dlabel.json | 12 ++ ...-pavia02_space-other_T2w_label-SC_seg.json | 6 +- ...rage_dwi_label-discs_desc-warp_dlabel.json | 9 ++ ...-1_mt-on_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...2_mt-off_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...-pavia03_space-other_T1w_label-SC_seg.json | 6 +- ...via03_space-other_T2star_label-SC_seg.json | 6 +- ...r_T2star_label-discs_desc-warp_dlabel.json | 12 ++ ...-pavia03_space-other_T2w_label-SC_seg.json | 6 +- ...rage_dwi_label-discs_desc-warp_dlabel.json | 9 ++ ...-1_mt-on_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...2_mt-off_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...-pavia04_space-other_T1w_label-SC_seg.json | 6 +- ...via04_space-other_T2star_label-SC_seg.json | 6 +- ...r_T2star_label-discs_desc-warp_dlabel.json | 12 ++ ...via04_space-other_T2w_csflabel-SC_seg.json | 8 +- ...-pavia04_space-other_T2w_label-SC_seg.json | 6 +- ...rage_dwi_label-discs_desc-warp_dlabel.json | 9 ++ ...-1_mt-on_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...2_mt-off_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...-pavia05_space-other_T1w_label-SC_seg.json | 6 +- ...via05_space-other_T2star_label-SC_seg.json | 6 +- ...r_T2star_label-discs_desc-warp_dlabel.json | 12 ++ ...-pavia05_space-other_T2w_label-SC_seg.json | 6 +- ...rage_dwi_label-discs_desc-warp_dlabel.json | 9 ++ ...-1_mt-on_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...2_mt-off_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...-pavia06_space-other_T1w_label-SC_seg.json | 6 +- ...via06_space-other_T2star_label-SC_seg.json | 6 +- ...r_T2star_label-discs_desc-warp_dlabel.json | 12 ++ ...-pavia06_space-other_T2w_label-SC_seg.json | 6 +- ...rage_dwi_label-discs_desc-warp_dlabel.json | 9 ++ ...-1_mt-on_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...2_mt-off_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...erform01_space-other_T1w_label-SC_seg.json | 6 +- ...orm01_space-other_T2star_label-SC_seg.json | 6 +- ...r_T2star_label-discs_desc-warp_dlabel.json | 12 ++ ...erform01_space-other_T2w_label-SC_seg.json | 6 +- ...rage_dwi_label-discs_desc-warp_dlabel.json | 9 ++ ...-1_mt-on_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...2_mt-off_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...erform02_space-other_T1w_label-SC_seg.json | 8 +- ...orm02_space-other_T2star_label-SC_seg.json | 6 +- ...r_T2star_label-discs_desc-warp_dlabel.json | 12 ++ ...orm02_space-other_T2w_csflabel-SC_seg.json | 8 +- ...erform02_space-other_T2w_label-SC_seg.json | 10 +- ...rage_dwi_label-discs_desc-warp_dlabel.json | 9 ++ ...-1_mt-on_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...2_mt-off_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...erform03_space-other_T1w_label-SC_seg.json | 6 +- ...orm03_space-other_T2star_label-SC_seg.json | 6 +- ...r_T2star_label-discs_desc-warp_dlabel.json | 12 ++ ...erform03_space-other_T2w_label-SC_seg.json | 6 +- ...rage_dwi_label-discs_desc-warp_dlabel.json | 9 ++ ...-1_mt-on_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...2_mt-off_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...erform04_space-other_T1w_label-SC_seg.json | 6 +- ...orm04_space-other_T2star_label-SC_seg.json | 6 +- ...r_T2star_label-discs_desc-warp_dlabel.json | 12 ++ ...erform04_space-other_T2w_label-SC_seg.json | 6 +- ...rage_dwi_label-discs_desc-warp_dlabel.json | 9 ++ ...-1_mt-on_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...2_mt-off_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...erform05_space-other_T1w_label-SC_seg.json | 6 +- ...orm05_space-other_T2star_label-SC_seg.json | 6 +- ...r_T2star_label-discs_desc-warp_dlabel.json | 12 ++ ...erform05_space-other_T2w_label-SC_seg.json | 6 +- ...rage_dwi_label-discs_desc-warp_dlabel.json | 9 ++ ...-1_mt-on_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...2_mt-off_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...erform06_space-other_T1w_label-SC_seg.json | 6 +- ...orm06_space-other_T2star_label-SC_seg.json | 6 +- ...r_T2star_label-discs_desc-warp_dlabel.json | 12 ++ ...erform06_space-other_T2w_label-SC_seg.json | 6 +- ...rage_dwi_label-discs_desc-warp_dlabel.json | 9 ++ ...-1_mt-on_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...2_mt-off_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...nsland01_space-other_T1w_label-SC_seg.json | 6 +- ...and01_space-other_T2star_label-SC_seg.json | 6 +- ...r_T2star_label-discs_desc-warp_dlabel.json | 12 ++ ...nsland01_space-other_T2w_label-SC_seg.json | 6 +- ...rage_dwi_label-discs_desc-warp_dlabel.json | 9 ++ ...-1_mt-on_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...2_mt-off_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...nsland02_space-other_T1w_label-SC_seg.json | 6 +- ...and02_space-other_T2star_label-SC_seg.json | 6 +- ...r_T2star_label-discs_desc-warp_dlabel.json | 12 ++ ...nsland02_space-other_T2w_label-SC_seg.json | 6 +- ...rage_dwi_label-discs_desc-warp_dlabel.json | 9 ++ ...-1_mt-on_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...2_mt-off_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...nsland03_space-other_T1w_label-SC_seg.json | 6 +- ...and03_space-other_T2star_label-SC_seg.json | 6 +- ...r_T2star_label-discs_desc-warp_dlabel.json | 12 ++ ...nsland03_space-other_T2w_label-SC_seg.json | 6 +- ...rage_dwi_label-discs_desc-warp_dlabel.json | 9 ++ ...-1_mt-on_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...2_mt-off_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...nsland04_space-other_T1w_label-SC_seg.json | 6 +- ...and04_space-other_T2star_label-SC_seg.json | 6 +- ...r_T2star_label-discs_desc-warp_dlabel.json | 12 ++ ...nsland04_space-other_T2w_label-SC_seg.json | 6 +- ...rage_dwi_label-discs_desc-warp_dlabel.json | 9 ++ ...-1_mt-on_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...2_mt-off_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...nsland05_space-other_T1w_label-SC_seg.json | 6 +- ...and05_space-other_T2star_label-SC_seg.json | 6 +- ...r_T2star_label-discs_desc-warp_dlabel.json | 12 ++ ...nsland05_space-other_T2w_label-SC_seg.json | 6 +- ...rage_dwi_label-discs_desc-warp_dlabel.json | 9 ++ ...-1_mt-on_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...2_mt-off_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...nsland06_space-other_T1w_label-SC_seg.json | 6 +- ...and06_space-other_T2star_label-SC_seg.json | 6 +- ...r_T2star_label-discs_desc-warp_dlabel.json | 12 ++ ...nsland06_space-other_T2w_label-SC_seg.json | 6 +- ...rage_dwi_label-discs_desc-warp_dlabel.json | 9 ++ ...-1_mt-on_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...2_mt-off_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...brooke01_space-other_T1w_label-SC_seg.json | 6 +- ...e01_space-other_T2star_gmlabel-SC_seg.json | 6 +- ...oke01_space-other_T2star_label-SC_seg.json | 6 +- ...r_T2star_label-discs_desc-warp_dlabel.json | 12 ++ ...brooke01_space-other_T2w_label-SC_seg.json | 6 +- ...rage_dwi_label-discs_desc-warp_dlabel.json | 9 ++ ...-1_mt-on_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...2_mt-off_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...brooke02_space-other_T1w_label-SC_seg.json | 6 +- ...oke02_space-other_T2star_label-SC_seg.json | 6 +- ...r_T2star_label-discs_desc-warp_dlabel.json | 12 ++ ...brooke02_space-other_T2w_label-SC_seg.json | 6 +- ...rage_dwi_label-discs_desc-warp_dlabel.json | 9 ++ ...-1_mt-on_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...2_mt-off_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...brooke03_space-other_T1w_label-SC_seg.json | 6 +- ...e03_space-other_T2star_gmlabel-SC_seg.json | 6 +- ...oke03_space-other_T2star_label-SC_seg.json | 6 +- ...r_T2star_label-discs_desc-warp_dlabel.json | 12 ++ ...brooke03_space-other_T2w_label-SC_seg.json | 6 +- ...rage_dwi_label-discs_desc-warp_dlabel.json | 9 ++ ...-1_mt-on_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...2_mt-off_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...brooke04_space-other_T1w_label-SC_seg.json | 6 +- ...oke04_space-other_T2star_label-SC_seg.json | 6 +- ...r_T2star_label-discs_desc-warp_dlabel.json | 12 ++ ...brooke04_space-other_T2w_label-SC_seg.json | 6 +- ...rage_dwi_label-discs_desc-warp_dlabel.json | 9 ++ ...-1_mt-on_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...2_mt-off_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...brooke05_space-other_T1w_label-SC_seg.json | 6 +- ...oke05_space-other_T2star_label-SC_seg.json | 6 +- ...r_T2star_label-discs_desc-warp_dlabel.json | 12 ++ ...brooke05_space-other_T2w_label-SC_seg.json | 6 +- ...rage_dwi_label-discs_desc-warp_dlabel.json | 9 ++ ...-1_mt-on_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...2_mt-off_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...brooke06_space-other_T1w_label-SC_seg.json | 6 +- ...oke06_space-other_T2star_label-SC_seg.json | 6 +- ...r_T2star_label-discs_desc-warp_dlabel.json | 12 ++ ...brooke06_space-other_T2w_label-SC_seg.json | 6 +- ...rage_dwi_label-discs_desc-warp_dlabel.json | 9 ++ ...-1_mt-on_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...2_mt-off_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...brooke07_space-other_T1w_label-SC_seg.json | 6 +- ...oke07_space-other_T2star_label-SC_seg.json | 6 +- ...r_T2star_label-discs_desc-warp_dlabel.json | 12 ++ ...brooke07_space-other_T2w_label-SC_seg.json | 6 +- ...rage_dwi_label-discs_desc-warp_dlabel.json | 9 ++ ...-1_mt-on_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...2_mt-off_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...anford01_space-other_T1w_label-SC_seg.json | 6 +- ...ord01_space-other_T2star_label-SC_seg.json | 6 +- ...r_T2star_label-discs_desc-warp_dlabel.json | 12 ++ ...anford01_space-other_T2w_label-SC_seg.json | 6 +- ...rage_dwi_label-discs_desc-warp_dlabel.json | 9 ++ ...-1_mt-on_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...2_mt-off_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...anford02_space-other_T1w_label-SC_seg.json | 6 +- ...ord02_space-other_T2star_label-SC_seg.json | 6 +- ...r_T2star_label-discs_desc-warp_dlabel.json | 12 ++ ...anford02_space-other_T2w_label-SC_seg.json | 6 +- ...rage_dwi_label-discs_desc-warp_dlabel.json | 9 ++ ...-1_mt-on_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...2_mt-off_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...anford03_space-other_T1w_label-SC_seg.json | 6 +- ...ord03_space-other_T2star_label-SC_seg.json | 6 +- ...r_T2star_label-discs_desc-warp_dlabel.json | 12 ++ ...anford03_space-other_T2w_label-SC_seg.json | 6 +- ...rage_dwi_label-discs_desc-warp_dlabel.json | 9 ++ ...-1_mt-on_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...2_mt-off_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...anford04_space-other_T1w_label-SC_seg.json | 6 +- ...ord04_space-other_T2star_label-SC_seg.json | 6 +- ...r_T2star_label-discs_desc-warp_dlabel.json | 12 ++ ...anford04_space-other_T2w_label-SC_seg.json | 6 +- ...rage_dwi_label-discs_desc-warp_dlabel.json | 9 ++ ...-1_mt-on_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...2_mt-off_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...anford05_space-other_T1w_label-SC_seg.json | 6 +- ...ord05_space-other_T2star_label-SC_seg.json | 6 +- ...r_T2star_label-discs_desc-warp_dlabel.json | 12 ++ ...anford05_space-other_T2w_label-SC_seg.json | 6 +- ...rage_dwi_label-discs_desc-warp_dlabel.json | 9 ++ 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...oSkyra04_space-other_T2w_label-SC_seg.json | 6 +- ...rage_dwi_label-discs_desc-warp_dlabel.json | 9 ++ ...-1_mt-on_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...2_mt-off_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...oSkyra05_space-other_T1w_label-SC_seg.json | 6 +- ...yra05_space-other_T2star_label-SC_seg.json | 6 +- ...r_T2star_label-discs_desc-warp_dlabel.json | 12 ++ ...oSkyra05_space-other_T2w_label-SC_seg.json | 6 +- ...rage_dwi_label-discs_desc-warp_dlabel.json | 9 ++ ...-1_mt-on_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...2_mt-off_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...oSkyra06_space-other_T1w_label-SC_seg.json | 6 +- ...yra06_space-other_T2star_label-SC_seg.json | 6 +- ...r_T2star_label-discs_desc-warp_dlabel.json | 12 ++ ...oSkyra06_space-other_T2w_label-SC_seg.json | 6 +- ...rage_dwi_label-discs_desc-warp_dlabel.json | 9 ++ ...-1_mt-on_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...2_mt-off_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...oSkyra07_space-other_T1w_label-SC_seg.json | 6 +- ...yra07_space-other_T2star_label-SC_seg.json | 6 +- ...r_T2star_label-discs_desc-warp_dlabel.json | 12 ++ ...oSkyra07_space-other_T2w_label-SC_seg.json | 6 +- ...rage_dwi_label-discs_desc-warp_dlabel.json | 9 ++ ...-1_mt-on_space-other_MTS_label-SC_seg.json | 5 +- ...ub-ubc01_space-other_T1w_label-SC_seg.json | 6 +- ...ubc01_space-other_T2star_label-SC_seg.json | 6 +- ...ub-ubc01_space-other_T2w_label-SC_seg.json | 6 +- ...-1_mt-on_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...2_mt-off_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...ub-ubc02_space-other_T1w_label-SC_seg.json | 6 +- ...ubc02_space-other_T2star_label-SC_seg.json | 6 +- ...r_T2star_label-discs_desc-warp_dlabel.json | 12 ++ ...ub-ubc02_space-other_T2w_label-SC_seg.json | 6 +- ...rage_dwi_label-discs_desc-warp_dlabel.json | 9 ++ ...-1_mt-on_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...2_mt-off_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...ub-ubc03_space-other_T1w_label-SC_seg.json | 6 +- ...ubc03_space-other_T2star_label-SC_seg.json | 6 +- ...r_T2star_label-discs_desc-warp_dlabel.json | 12 ++ ...ub-ubc03_space-other_T2w_label-SC_seg.json | 6 +- ...rage_dwi_label-discs_desc-warp_dlabel.json | 9 ++ ...-1_mt-on_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...2_mt-off_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...ub-ubc04_space-other_T1w_label-SC_seg.json | 6 +- ...ubc04_space-other_T2star_label-SC_seg.json | 6 +- ...r_T2star_label-discs_desc-warp_dlabel.json | 12 ++ ...ub-ubc04_space-other_T2w_label-SC_seg.json | 6 +- ...rage_dwi_label-discs_desc-warp_dlabel.json | 9 ++ ...-1_mt-on_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...2_mt-off_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...ub-ubc05_space-other_T1w_label-SC_seg.json | 6 +- ...ubc05_space-other_T2star_label-SC_seg.json | 6 +- ...r_T2star_label-discs_desc-warp_dlabel.json | 12 ++ ...ub-ubc05_space-other_T2w_label-SC_seg.json | 6 +- ...rage_dwi_label-discs_desc-warp_dlabel.json | 9 ++ ...-1_mt-on_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...2_mt-off_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...ub-ubc06_space-other_T1w_label-SC_seg.json | 6 +- ...ubc06_space-other_T2star_label-SC_seg.json | 6 +- ...r_T2star_label-discs_desc-warp_dlabel.json | 12 ++ ...ub-ubc06_space-other_T2w_label-SC_seg.json | 6 +- ...rage_dwi_label-discs_desc-warp_dlabel.json | 9 ++ ...-1_mt-on_space-other_MTS_label-SC_seg.json | 5 +- ...2_mt-off_space-other_MTS_label-SC_seg.json | 5 +- ...cdavis01_space-other_T1w_label-SC_seg.json | 6 +- ...vis01_space-other_T2star_label-SC_seg.json | 6 +- ...cdavis01_space-other_T2w_label-SC_seg.json | 6 +- ...-1_mt-on_space-other_MTS_label-SC_seg.json | 5 +- ...2_mt-off_space-other_MTS_label-SC_seg.json | 5 +- ...cdavis02_space-other_T1w_label-SC_seg.json | 6 +- ...vis02_space-other_T2star_label-SC_seg.json | 6 +- ...cdavis02_space-other_T2w_label-SC_seg.json | 6 +- ...-1_mt-on_space-other_MTS_label-SC_seg.json | 7 +- ...cdavis03_space-other_T1w_label-SC_seg.json | 6 +- ...vis03_space-other_T2star_label-SC_seg.json | 8 +- ...cdavis03_space-other_T2w_label-SC_seg.json | 6 +- ...-1_mt-on_space-other_MTS_label-SC_seg.json | 5 +- ...2_mt-off_space-other_MTS_label-SC_seg.json | 5 +- ...cdavis04_space-other_T1w_label-SC_seg.json | 6 +- ...vis04_space-other_T2star_label-SC_seg.json | 6 +- ...cdavis04_space-other_T2w_label-SC_seg.json | 6 +- ...-1_mt-on_space-other_MTS_label-SC_seg.json | 5 +- ...cdavis05_space-other_T1w_label-SC_seg.json | 6 +- ...vis05_space-other_T2star_label-SC_seg.json | 6 +- ...cdavis05_space-other_T2w_label-SC_seg.json | 6 +- ...-1_mt-on_space-other_MTS_label-SC_seg.json | 5 +- ...cdavis06_space-other_T1w_label-SC_seg.json | 6 +- ...vis06_space-other_T2star_label-SC_seg.json | 6 +- ...cdavis06_space-other_T2w_label-SC_seg.json | 6 +- ...-1_mt-on_space-other_MTS_label-SC_seg.json | 7 +- ...cdavis07_space-other_T1w_label-SC_seg.json | 6 +- ...vis07_space-other_T2star_label-SC_seg.json | 8 +- ...cdavis07_space-other_T2w_label-SC_seg.json | 6 +- ...-1_mt-on_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...2_mt-off_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...ub-ucl01_space-other_T1w_label-SC_seg.json | 6 +- ...ucl01_space-other_T2star_label-SC_seg.json | 6 +- ...r_T2star_label-discs_desc-warp_dlabel.json | 12 ++ ...ub-ucl01_space-other_T2w_label-SC_seg.json | 6 +- ...rage_dwi_label-discs_desc-warp_dlabel.json | 9 ++ ...-1_mt-on_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...2_mt-off_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...ub-ucl02_space-other_T1w_label-SC_seg.json | 6 +- ...ucl02_space-other_T2star_label-SC_seg.json | 6 +- ...r_T2star_label-discs_desc-warp_dlabel.json | 12 ++ ...ub-ucl02_space-other_T2w_label-SC_seg.json | 6 +- ...rage_dwi_label-discs_desc-warp_dlabel.json | 9 ++ ...-1_mt-on_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...2_mt-off_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...ub-ucl03_space-other_T1w_label-SC_seg.json | 6 +- ...ucl03_space-other_T2star_label-SC_seg.json | 6 +- ...r_T2star_label-discs_desc-warp_dlabel.json | 12 ++ ...ub-ucl03_space-other_T2w_label-SC_seg.json | 6 +- ...rage_dwi_label-discs_desc-warp_dlabel.json | 9 ++ ...-1_mt-on_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...2_mt-off_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...ub-ucl04_space-other_T1w_label-SC_seg.json | 6 +- ...ucl04_space-other_T2star_label-SC_seg.json | 6 +- ...r_T2star_label-discs_desc-warp_dlabel.json | 12 ++ ...ub-ucl04_space-other_T2w_label-SC_seg.json | 6 +- ...rage_dwi_label-discs_desc-warp_dlabel.json | 9 ++ ...-1_mt-on_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...2_mt-off_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...ub-ucl05_space-other_T1w_label-SC_seg.json | 6 +- ...ucl05_space-other_T2star_label-SC_seg.json | 6 +- ...r_T2star_label-discs_desc-warp_dlabel.json | 12 ++ ...ub-ucl05_space-other_T2w_label-SC_seg.json | 6 +- ...rage_dwi_label-discs_desc-warp_dlabel.json | 9 ++ ...-1_mt-on_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...2_mt-off_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...ub-ucl06_space-other_T1w_label-SC_seg.json | 6 +- ...ucl06_space-other_T2star_label-SC_seg.json | 6 +- ...r_T2star_label-discs_desc-warp_dlabel.json | 12 ++ ...ub-ucl06_space-other_T2w_label-SC_seg.json | 6 +- ...rage_dwi_label-discs_desc-warp_dlabel.json | 9 ++ ...-1_mt-on_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...2_mt-off_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...ub-unf01_space-other_T1w_label-SC_seg.json | 6 +- ...unf01_space-other_T2star_label-SC_seg.json | 6 +- ...r_T2star_label-discs_desc-warp_dlabel.json | 12 ++ ...ub-unf01_space-other_T2w_label-SC_seg.json | 6 +- ...rage_dwi_label-discs_desc-warp_dlabel.json | 9 ++ ...-1_mt-on_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...2_mt-off_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...ub-unf02_space-other_T1w_label-SC_seg.json | 6 +- ...unf02_space-other_T2star_label-SC_seg.json | 6 +- ...r_T2star_label-discs_desc-warp_dlabel.json | 12 ++ ...ub-unf02_space-other_T2w_label-SC_seg.json | 6 +- ...rage_dwi_label-discs_desc-warp_dlabel.json | 9 ++ ...-1_mt-on_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...2_mt-off_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...ub-unf03_space-other_T1w_label-SC_seg.json | 6 +- ...unf03_space-other_T2star_label-SC_seg.json | 6 +- ...r_T2star_label-discs_desc-warp_dlabel.json | 12 ++ ...ub-unf03_space-other_T2w_label-SC_seg.json | 6 +- ...rage_dwi_label-discs_desc-warp_dlabel.json | 9 ++ ...-1_mt-on_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...2_mt-off_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...ub-unf04_space-other_T1w_label-SC_seg.json | 6 +- ...unf04_space-other_T2star_label-SC_seg.json | 6 +- ...r_T2star_label-discs_desc-warp_dlabel.json | 12 ++ ...ub-unf04_space-other_T2w_label-SC_seg.json | 6 +- ...rage_dwi_label-discs_desc-warp_dlabel.json | 9 ++ ...-1_mt-on_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...2_mt-off_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...ub-unf05_space-other_T1w_label-SC_seg.json | 6 +- ...unf05_space-other_T2star_label-SC_seg.json | 6 +- ...r_T2star_label-discs_desc-warp_dlabel.json | 12 ++ ...ub-unf05_space-other_T2w_label-SC_seg.json | 6 +- ...rage_dwi_label-discs_desc-warp_dlabel.json | 9 ++ ...-1_mt-on_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...2_mt-off_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...ub-unf06_space-other_T1w_label-SC_seg.json | 6 +- ...unf06_space-other_T2star_label-SC_seg.json | 6 +- ...r_T2star_label-discs_desc-warp_dlabel.json | 12 ++ ...ub-unf06_space-other_T2w_label-SC_seg.json | 6 +- ...rage_dwi_label-discs_desc-warp_dlabel.json | 9 ++ ...-1_mt-on_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...2_mt-off_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...ub-unf07_space-other_T1w_label-SC_seg.json | 6 +- ...unf07_space-other_T2star_label-SC_seg.json | 6 +- ...r_T2star_label-discs_desc-warp_dlabel.json | 12 ++ ...ub-unf07_space-other_T2w_label-SC_seg.json | 6 +- ...rage_dwi_label-discs_desc-warp_dlabel.json | 9 ++ ...-1_mt-on_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...2_mt-off_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...Hebron01_space-other_T1w_label-SC_seg.json | 6 +- ...ron01_space-other_T2star_label-SC_seg.json | 6 +- ...r_T2star_label-discs_desc-warp_dlabel.json | 12 ++ ...Hebron01_space-other_T2w_label-SC_seg.json | 6 +- ...rage_dwi_label-discs_desc-warp_dlabel.json | 9 ++ ...-1_mt-on_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...2_mt-off_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...Hebron02_space-other_T1w_label-SC_seg.json | 6 +- ...ron02_space-other_T2star_label-SC_seg.json | 6 +- ...r_T2star_label-discs_desc-warp_dlabel.json | 12 ++ ...Hebron02_space-other_T2w_label-SC_seg.json | 6 +- ...rage_dwi_label-discs_desc-warp_dlabel.json | 9 ++ ...-1_mt-on_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...2_mt-off_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...Hebron03_space-other_T1w_label-SC_seg.json | 6 +- ...ron03_space-other_T2star_label-SC_seg.json | 6 +- ...r_T2star_label-discs_desc-warp_dlabel.json | 12 ++ ...Hebron03_space-other_T2w_label-SC_seg.json | 6 +- ...rage_dwi_label-discs_desc-warp_dlabel.json | 9 ++ ...-1_mt-on_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...2_mt-off_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...Hebron04_space-other_T1w_label-SC_seg.json | 6 +- ...ron04_space-other_T2star_label-SC_seg.json | 6 +- ...r_T2star_label-discs_desc-warp_dlabel.json | 12 ++ ...Hebron04_space-other_T2w_label-SC_seg.json | 6 +- ...rage_dwi_label-discs_desc-warp_dlabel.json | 9 ++ ...-1_mt-on_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...2_mt-off_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...Hebron05_space-other_T1w_label-SC_seg.json | 6 +- ...ron05_space-other_T2star_label-SC_seg.json | 6 +- ...r_T2star_label-discs_desc-warp_dlabel.json | 12 ++ ...Hebron05_space-other_T2w_label-SC_seg.json | 6 +- ...rage_dwi_label-discs_desc-warp_dlabel.json | 9 ++ ...-1_mt-on_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...2_mt-off_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...Hebron06_space-other_T1w_label-SC_seg.json | 6 +- ...ron06_space-other_T2star_label-SC_seg.json | 6 +- ...r_T2star_label-discs_desc-warp_dlabel.json | 12 ++ ...Hebron06_space-other_T2w_label-SC_seg.json | 6 +- ...rage_dwi_label-discs_desc-warp_dlabel.json | 9 ++ ...-1_mt-on_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...2_mt-off_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...Hebron07_space-other_T1w_label-SC_seg.json | 6 +- ...ron07_space-other_T2star_label-SC_seg.json | 6 +- ...r_T2star_label-discs_desc-warp_dlabel.json | 12 ++ ...Hebron07_space-other_T2w_label-SC_seg.json | 6 +- ...rage_dwi_label-discs_desc-warp_dlabel.json | 9 ++ 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...rage_dwi_label-discs_desc-warp_dlabel.json | 9 ++ ...-1_mt-on_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...2_mt-off_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...chieva03_space-other_T1w_label-SC_seg.json | 6 +- ...eva03_space-other_T2star_label-SC_seg.json | 6 +- ...r_T2star_label-discs_desc-warp_dlabel.json | 12 ++ ...chieva03_space-other_T2w_label-SC_seg.json | 6 +- ...rage_dwi_label-discs_desc-warp_dlabel.json | 9 ++ ...-1_mt-on_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...2_mt-off_space-other_MTS_label-SC_seg.json | 5 +- ...ther_MTS_label-discs_desc-warp_dlabel.json | 12 ++ ...chieva04_space-other_T1w_label-SC_seg.json | 6 +- ...eva04_space-other_T2star_label-SC_seg.json | 6 +- ...r_T2star_label-discs_desc-warp_dlabel.json | 12 ++ ...chieva04_space-other_T2w_label-SC_seg.json | 6 +- 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| 5 +- ...mu04_space-other_T1w_label-SC_softseg.json | 6 +- ...4_space-other_T2star_label-SC_softseg.json | 6 +- ...mu04_space-other_T2w_label-SC_softseg.json | 6 +- ...t-on_space-other_MTS_label-SC_softseg.json | 5 +- ...-off_space-other_MTS_label-SC_softseg.json | 5 +- ...mu05_space-other_T1w_label-SC_softseg.json | 6 +- ...5_space-other_T2star_label-SC_softseg.json | 6 +- ...mu05_space-other_T2w_label-SC_softseg.json | 6 +- ...t-on_space-other_MTS_label-SC_softseg.json | 5 +- ...-off_space-other_MTS_label-SC_softseg.json | 5 +- ...st01_space-other_T1w_label-SC_softseg.json | 6 +- ...1_space-other_T2star_label-SC_softseg.json | 6 +- ...st01_space-other_T2w_label-SC_softseg.json | 6 +- ...t-on_space-other_MTS_label-SC_softseg.json | 5 +- ...-off_space-other_MTS_label-SC_softseg.json | 5 +- ...st02_space-other_T1w_label-SC_softseg.json | 6 +- ...2_space-other_T2star_label-SC_softseg.json | 6 +- ...st02_space-other_T2w_label-SC_softseg.json | 6 +- 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| 6 +- ...st06_space-other_T2w_label-SC_softseg.json | 6 +- ...t-on_space-other_MTS_label-SC_softseg.json | 5 +- ...-off_space-other_MTS_label-SC_softseg.json | 5 +- ...na01_space-other_T1w_label-SC_softseg.json | 6 +- ...1_space-other_T2star_label-SC_softseg.json | 6 +- ...na01_space-other_T2w_label-SC_softseg.json | 6 +- ...t-on_space-other_MTS_label-SC_softseg.json | 5 +- ...-off_space-other_MTS_label-SC_softseg.json | 5 +- ...na02_space-other_T1w_label-SC_softseg.json | 6 +- ...2_space-other_T2star_label-SC_softseg.json | 6 +- .../anat/sub-barcelona02_space-other_T2w.json | 6 +- ...na02_space-other_T2w_label-SC_softseg.json | 6 +- ...t-on_space-other_MTS_label-SC_softseg.json | 5 +- ...-off_space-other_MTS_label-SC_softseg.json | 5 +- ...na03_space-other_T1w_label-SC_softseg.json | 6 +- ...3_space-other_T2star_label-SC_softseg.json | 6 +- ...na03_space-other_T2w_label-SC_softseg.json | 6 +- ...t-on_space-other_MTS_label-SC_softseg.json | 5 +- 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| 6 +- ...ec06_space-other_T2w_label-SC_softseg.json | 6 +- ...t-on_space-other_MTS_label-SC_softseg.json | 5 +- ...-off_space-other_MTS_label-SC_softseg.json | 5 +- ...hb01_space-other_T1w_label-SC_softseg.json | 6 +- ...1_space-other_T2star_label-SC_softseg.json | 6 +- ...hb01_space-other_T2w_label-SC_softseg.json | 6 +- ...t-on_space-other_MTS_label-SC_softseg.json | 5 +- ...-off_space-other_MTS_label-SC_softseg.json | 5 +- ...hb04_space-other_T1w_label-SC_softseg.json | 6 +- ...4_space-other_T2star_label-SC_softseg.json | 6 +- ...hb04_space-other_T2w_label-SC_softseg.json | 6 +- ...t-on_space-other_MTS_label-SC_softseg.json | 5 +- ...-off_space-other_MTS_label-SC_softseg.json | 5 +- ...hb05_space-other_T1w_label-SC_softseg.json | 6 +- ...5_space-other_T2star_label-SC_softseg.json | 6 +- ...hb05_space-other_T2w_label-SC_softseg.json | 6 +- ...t-on_space-other_MTS_label-SC_softseg.json | 5 +- ...-off_space-other_MTS_label-SC_softseg.json | 5 +- 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| 5 +- ...-off_space-other_MTS_label-SC_softseg.json | 5 +- ...ff04_space-other_T1w_label-SC_softseg.json | 6 +- ...4_space-other_T2star_label-SC_softseg.json | 6 +- ...ff04_space-other_T2w_label-SC_softseg.json | 6 +- ...t-on_space-other_MTS_label-SC_softseg.json | 5 +- ...-off_space-other_MTS_label-SC_softseg.json | 5 +- ...ff05_space-other_T1w_label-SC_softseg.json | 6 +- ...5_space-other_T2star_label-SC_softseg.json | 6 +- ...ff05_space-other_T2w_label-SC_softseg.json | 6 +- ...t-on_space-other_MTS_label-SC_softseg.json | 5 +- ...-off_space-other_MTS_label-SC_softseg.json | 5 +- ...ff06_space-other_T1w_label-SC_softseg.json | 6 +- ...6_space-other_T2star_label-SC_softseg.json | 6 +- ...ff06_space-other_T2w_label-SC_softseg.json | 6 +- ...t-on_space-other_MTS_label-SC_softseg.json | 5 +- ...-off_space-other_MTS_label-SC_softseg.json | 5 +- ...ra01_space-other_T1w_label-SC_softseg.json | 6 +- ...1_space-other_T2star_label-SC_softseg.json | 6 +- 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derivatives/labels/sub-vallHebron05/anat/sub-vallHebron05_space-other_T2star_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-vallHebron05/dwi/sub-vallHebron05_rec-average_dwi_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-vallHebron06/anat/sub-vallHebron06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-vallHebron06/anat/sub-vallHebron06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-vallHebron06/anat/sub-vallHebron06_space-other_T2star_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-vallHebron06/dwi/sub-vallHebron06_rec-average_dwi_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-vallHebron07/anat/sub-vallHebron07_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-vallHebron07/anat/sub-vallHebron07_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-vallHebron07/anat/sub-vallHebron07_space-other_T2star_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-vallHebron07/dwi/sub-vallHebron07_rec-average_dwi_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-vuiisAchieva01/anat/sub-vuiisAchieva01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-vuiisAchieva01/anat/sub-vuiisAchieva01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-vuiisAchieva01/anat/sub-vuiisAchieva01_space-other_T2star_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-vuiisAchieva01/dwi/sub-vuiisAchieva01_rec-average_dwi_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-vuiisAchieva02/anat/sub-vuiisAchieva02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-vuiisAchieva02/anat/sub-vuiisAchieva02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-vuiisAchieva02/anat/sub-vuiisAchieva02_space-other_T2star_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-vuiisAchieva02/dwi/sub-vuiisAchieva02_rec-average_dwi_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-vuiisAchieva03/anat/sub-vuiisAchieva03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-vuiisAchieva03/anat/sub-vuiisAchieva03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-vuiisAchieva03/anat/sub-vuiisAchieva03_space-other_T2star_label-discs_desc-warp_dlabel.json create mode 100644 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derivatives/labels/sub-vuiisAchieva05/anat/sub-vuiisAchieva05_space-other_T2star_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-vuiisAchieva05/dwi/sub-vuiisAchieva05_rec-average_dwi_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-vuiisAchieva06/anat/sub-vuiisAchieva06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-vuiisAchieva06/anat/sub-vuiisAchieva06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-vuiisAchieva06/anat/sub-vuiisAchieva06_space-other_T2star_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-vuiisAchieva06/dwi/sub-vuiisAchieva06_rec-average_dwi_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-vuiisIngenia01/anat/sub-vuiisIngenia01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-vuiisIngenia01/anat/sub-vuiisIngenia01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-vuiisIngenia01/anat/sub-vuiisIngenia01_space-other_T2star_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-vuiisIngenia01/dwi/sub-vuiisIngenia01_rec-average_dwi_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-vuiisIngenia02/anat/sub-vuiisIngenia02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-vuiisIngenia02/anat/sub-vuiisIngenia02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-vuiisIngenia02/anat/sub-vuiisIngenia02_space-other_T2star_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-vuiisIngenia02/dwi/sub-vuiisIngenia02_rec-average_dwi_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-vuiisIngenia03/anat/sub-vuiisIngenia03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-vuiisIngenia03/anat/sub-vuiisIngenia03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-vuiisIngenia03/anat/sub-vuiisIngenia03_space-other_T2star_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-vuiisIngenia03/dwi/sub-vuiisIngenia03_rec-average_dwi_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-vuiisIngenia04/anat/sub-vuiisIngenia04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-vuiisIngenia04/anat/sub-vuiisIngenia04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-vuiisIngenia04/anat/sub-vuiisIngenia04_space-other_T2star_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-vuiisIngenia04/dwi/sub-vuiisIngenia04_rec-average_dwi_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-vuiisIngenia05/anat/sub-vuiisIngenia05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-vuiisIngenia05/anat/sub-vuiisIngenia05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-vuiisIngenia05/anat/sub-vuiisIngenia05_space-other_T2star_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-vuiisIngenia05/dwi/sub-vuiisIngenia05_rec-average_dwi_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-vuiisIngenia06/anat/sub-vuiisIngenia06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-vuiisIngenia06/anat/sub-vuiisIngenia06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-vuiisIngenia06/anat/sub-vuiisIngenia06_space-other_T2star_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-vuiisIngenia06/dwi/sub-vuiisIngenia06_rec-average_dwi_label-discs_desc-warp_dlabel.json diff --git a/code/update_json.py b/code/update_json.py new file mode 100644 index 0000000000..ba3c3d722c --- /dev/null +++ b/code/update_json.py @@ -0,0 +1,105 @@ +import os +import json +import argparse + + +def get_parser(): + parser = argparse.ArgumentParser( + description="Adds spatial reference information to json sidecars." ) + parser.add_argument('-d', + required=True, help='Directory to process JSON files in') + parser.add_argument('-r', + default='0.8x0.8x0.8', + help='Resampling factor to add to SpatialReference') + + return parser + + +def create_json_file(nii_gz_files): + """Creates a JSON file listing all .nii.gz files and includes the resampling factor. + + Args: + nii_gz_files (list): A list of paths to .nii.gz files. + """ + data = { + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy":[ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + }] + } + for file in nii_gz_files: + output_path = file.replace('.nii.gz', '.json') + with open(output_path, 'w', encoding='utf-8') as file: + json.dump(data, file, indent=4) + + +def add_spatial_reference(file_path, resampling_factor): + """Adds the SpatialReference field to a JSON file. + + Args: + file_path (str): The path to the JSON file. + """ + with open(file_path, 'r+', encoding='utf-8') as file: + # Load the existing data + data = json.load(file) + + # Add the "SpatialReference" field + data["SpatialReference"] = { + # "Resampling": resampling_factor, + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } + + # Reset file pointer to the beginning and truncate the file + file.seek(0) + file.truncate() + + # Write the modified data back to the file + json.dump(data, file, indent=4) + + +def find_nii_gz_files(directory): + """Finds all .nii.gz files in a directory and its subdirectories. + + Args: + directory (str): The root directory to start the search from. + + Returns: + list: A list of paths to the .nii.gz files found. + """ + nii_gz_files = [] + for root, _, files in os.walk(directory): + for file in files: + if ('label-discs_desc-warp_dlabel.nii.gz' in file): + nii_gz_files.append(os.path.join(root, file)) + + return nii_gz_files + + +def process_directory(directory, resampling_factor): + """Recursively processes directories to find and update JSON files. + + Args: + directory (str): The root directory to start the search from. + """ + for root, _, files in os.walk(directory): + for file in files: + if ('T2star' in file) and ('.json' in file): + file_path = os.path.join(root, file) + add_spatial_reference(file_path, resampling_factor) + print(f"Updated {file_path}") + +def main(): + parser = get_parser() + args = parser.parse_args() + #process_directory(args.d, args.r) + nii_gz_files = find_nii_gz_files(args.d) + create_json_file(nii_gz_files) + +if __name__ == "__main__": + main() \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-amu01/anat/sub-amu01_flip-1_mt-on_space-other_MTS.json b/derivatives/data_preprocessed/sub-amu01/anat/sub-amu01_flip-1_mt-on_space-other_MTS.json index 23b5c6cb96..8d6d51d453 100644 --- a/derivatives/data_preprocessed/sub-amu01/anat/sub-amu01_flip-1_mt-on_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-amu01/anat/sub-amu01_flip-1_mt-on_space-other_MTS.json @@ -1,62 +1,72 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Verio", - "InstitutionName": "CEMEREM", - "InstitutionalDepartmentName": "CEMEREM", - "InstitutionAddress": "RUE_ST_PIERRE_264_MARSEILLE...92C536..._District_FR_13006", - "DeviceSerialNumber": "40146", - "StationName": "MRC40146", - "PatientPosition": "HFS", - "ProcedureStepDescription": "TEST_VC_SPINE", - "SoftwareVersions": "syngo_MR_B17", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-MT1", - "ProtocolName": "GRE-MT1", - "ScanningSequence": "GR", - "SequenceVariant": "MTC_SP", - "ScanOptions": "MT", - "SequenceName": "_fl3d1", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "DIS2D"], - "SeriesNumber": 13, - "AcquisitionTime": "12:09:20.497500", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SAR": 0.543298, - "EchoTime": 0.0035, - "RepetitionTime": 0.035, - "FlipAngle": 9, - "PartialFourier": 1, - "BaseResolution": 256, - "ShimSetting": [ - -5818, - 12738, - -11958, - -438, - -319, - 1383, - 480, - -194 ], - "TxRefAmp": 351.351, - "PhaseResolution": 1, - "ReceiveCoilName": "NeckMatrix", - "PulseSequenceDetails": "%SiemensSeq%_gre", - "PercentPhaseFOV": 100, - "PhaseEncodingSteps": 255, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 256, - "ParallelReductionFactorInPlane": 2, - "PixelBandwidth": 260, - "DwellTime": 7.5e-06, - "ImageOrientationPatientDICOM": [ - 1, - 0, - 0, - 0, - 0.99889, - -0.0471065 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20171215 (OpenJPEG build) Clang8.1.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Verio", + "InstitutionName": "CEMEREM", + "InstitutionalDepartmentName": "CEMEREM", + "InstitutionAddress": "RUE_ST_PIERRE_264_MARSEILLE...92C536..._District_FR_13006", + "DeviceSerialNumber": "40146", + "StationName": "MRC40146", + "PatientPosition": "HFS", + "ProcedureStepDescription": "TEST_VC_SPINE", + "SoftwareVersions": "syngo_MR_B17", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-MT1", + "ProtocolName": "GRE-MT1", + "ScanningSequence": "GR", + "SequenceVariant": "MTC_SP", + "ScanOptions": "MT", + "SequenceName": "_fl3d1", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "DIS2D" + ], + "SeriesNumber": 13, + "AcquisitionTime": "12:09:20.497500", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SAR": 0.543298, + "EchoTime": 0.0035, + "RepetitionTime": 0.035, + "FlipAngle": 9, + "PartialFourier": 1, + "BaseResolution": 256, + "ShimSetting": [ + -5818, + 12738, + -11958, + -438, + -319, + 1383, + 480, + -194 + ], + "TxRefAmp": 351.351, + "PhaseResolution": 1, + "ReceiveCoilName": "NeckMatrix", + "PulseSequenceDetails": "%SiemensSeq%_gre", + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 255, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "ParallelReductionFactorInPlane": 2, + "PixelBandwidth": 260, + "DwellTime": 7.5e-06, + "ImageOrientationPatientDICOM": [ + 1, + 0, + 0, + 0, + 0.99889, + -0.0471065 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20171215 (OpenJPEG build) Clang8.1.0", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-amu01/anat/sub-amu01_flip-2_mt-off_space-other_MTS.json b/derivatives/data_preprocessed/sub-amu01/anat/sub-amu01_flip-2_mt-off_space-other_MTS.json index 7ac6f0a6eb..9d79ab5f2d 100644 --- a/derivatives/data_preprocessed/sub-amu01/anat/sub-amu01_flip-2_mt-off_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-amu01/anat/sub-amu01_flip-2_mt-off_space-other_MTS.json @@ -1,61 +1,71 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Verio", - "InstitutionName": "CEMEREM", - "InstitutionalDepartmentName": "CEMEREM", - "InstitutionAddress": "RUE_ST_PIERRE_264_MARSEILLE...92C536..._District_FR_13006", - "DeviceSerialNumber": "40146", - "StationName": "MRC40146", - "PatientPosition": "HFS", - "ProcedureStepDescription": "TEST_VC_SPINE", - "SoftwareVersions": "syngo_MR_B17", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-T1w", - "ProtocolName": "GRE-T1w", - "ScanningSequence": "GR", - "SequenceVariant": "SP", - "SequenceName": "_fl3d1", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "DIS2D"], - "SeriesNumber": 15, - "AcquisitionTime": "12:13:48.242500", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SAR": 0.0352258, - "EchoTime": 0.0035, - "RepetitionTime": 0.015, - "FlipAngle": 15, - "PartialFourier": 1, - "BaseResolution": 256, - "ShimSetting": [ - -5818, - 12738, - -11958, - -438, - -319, - 1383, - 480, - -194 ], - "TxRefAmp": 351.351, - "PhaseResolution": 1, - "ReceiveCoilName": "NeckMatrix", - "PulseSequenceDetails": "%SiemensSeq%_gre", - "PercentPhaseFOV": 100, - "PhaseEncodingSteps": 255, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 256, - "ParallelReductionFactorInPlane": 2, - "PixelBandwidth": 260, - "DwellTime": 7.5e-06, - "ImageOrientationPatientDICOM": [ - 1, - 0, - 0, - 0, - 0.99889, - -0.0471065 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20171215 (OpenJPEG build) Clang8.1.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Verio", + "InstitutionName": "CEMEREM", + "InstitutionalDepartmentName": "CEMEREM", + "InstitutionAddress": "RUE_ST_PIERRE_264_MARSEILLE...92C536..._District_FR_13006", + "DeviceSerialNumber": "40146", + "StationName": "MRC40146", + "PatientPosition": "HFS", + "ProcedureStepDescription": "TEST_VC_SPINE", + "SoftwareVersions": "syngo_MR_B17", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-T1w", + "ProtocolName": "GRE-T1w", + "ScanningSequence": "GR", + "SequenceVariant": "SP", + "SequenceName": "_fl3d1", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "DIS2D" + ], + "SeriesNumber": 15, + "AcquisitionTime": "12:13:48.242500", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SAR": 0.0352258, + "EchoTime": 0.0035, + "RepetitionTime": 0.015, + "FlipAngle": 15, + "PartialFourier": 1, + "BaseResolution": 256, + "ShimSetting": [ + -5818, + 12738, + -11958, + -438, + -319, + 1383, + 480, + -194 + ], + "TxRefAmp": 351.351, + "PhaseResolution": 1, + "ReceiveCoilName": "NeckMatrix", + "PulseSequenceDetails": "%SiemensSeq%_gre", + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 255, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "ParallelReductionFactorInPlane": 2, + "PixelBandwidth": 260, + "DwellTime": 7.5e-06, + "ImageOrientationPatientDICOM": [ + 1, + 0, + 0, + 0, + 0.99889, + -0.0471065 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20171215 (OpenJPEG build) Clang8.1.0", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-amu01/anat/sub-amu01_space-other_T1w.json b/derivatives/data_preprocessed/sub-amu01/anat/sub-amu01_space-other_T1w.json index 7a7526ab8e..a8a77afda9 100644 --- a/derivatives/data_preprocessed/sub-amu01/anat/sub-amu01_space-other_T1w.json +++ b/derivatives/data_preprocessed/sub-amu01/anat/sub-amu01_space-other_T1w.json @@ -1,63 +1,75 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Verio", - "InstitutionName": "CEMEREM", - "InstitutionalDepartmentName": "CEMEREM", - "InstitutionAddress": "RUE_ST_PIERRE_264_MARSEILLE...92C536..._District_FR_13006", - "DeviceSerialNumber": "40146", - "StationName": "MRC40146", - "PatientPosition": "HFS", - "ProcedureStepDescription": "TEST_VC_SPINE", - "SoftwareVersions": "syngo_MR_B17", - "MRAcquisitionType": "3D", - "SeriesDescription": "T1w", - "ProtocolName": "T1w", - "ScanningSequence": "GR_IR", - "SequenceVariant": "SP_MP", - "ScanOptions": "IR", - "SequenceName": "_tfl3d1", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS2D"], - "SeriesNumber": 3, - "AcquisitionTime": "11:50:7.980000", - "AcquisitionNumber": 1, - "SliceThickness": 1, - "SAR": 0.0592781, - "EchoTime": 0.00321, - "RepetitionTime": 2, - "InversionTime": 1, - "FlipAngle": 9, - "PartialFourier": 1, - "BaseResolution": 320, - "ShimSetting": [ - -5787, - 12766, - -11935, - 18, - -112, - 27, - 622, - 117 ], - "TxRefAmp": 420.82, - "PhaseResolution": 1, - "ReceiveCoilName": "NeckMatrix", - "PulseSequenceDetails": "%SiemensSeq%_tfl", - "PercentPhaseFOV": 81.25, - "PhaseEncodingSteps": 259, - "AcquisitionMatrixPE": 260, - "ReconMatrixPE": 320, - "ParallelReductionFactorInPlane": 2, - "PixelBandwidth": 150, - "DwellTime": 1.04e-05, - "ImageOrientationPatientDICOM": [ - 0, - 1, - -0.000349045, - 0, - -0.000349045, - -1 ], - "InPlanePhaseEncodingDirectionDICOM": "ROW", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20171215 (OpenJPEG build) Clang8.1.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Verio", + "InstitutionName": "CEMEREM", + "InstitutionalDepartmentName": "CEMEREM", + "InstitutionAddress": "RUE_ST_PIERRE_264_MARSEILLE...92C536..._District_FR_13006", + "DeviceSerialNumber": "40146", + "StationName": "MRC40146", + "PatientPosition": "HFS", + "ProcedureStepDescription": "TEST_VC_SPINE", + "SoftwareVersions": "syngo_MR_B17", + "MRAcquisitionType": "3D", + "SeriesDescription": "T1w", + "ProtocolName": "T1w", + "ScanningSequence": "GR_IR", + "SequenceVariant": "SP_MP", + "ScanOptions": "IR", + "SequenceName": "_tfl3d1", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS2D" + ], + "SeriesNumber": 3, + "AcquisitionTime": "11:50:7.980000", + "AcquisitionNumber": 1, + "SliceThickness": 1, + "SAR": 0.0592781, + "EchoTime": 0.00321, + "RepetitionTime": 2, + "InversionTime": 1, + "FlipAngle": 9, + "PartialFourier": 1, + "BaseResolution": 320, + "ShimSetting": [ + -5787, + 12766, + -11935, + 18, + -112, + 27, + 622, + 117 + ], + "TxRefAmp": 420.82, + "PhaseResolution": 1, + "ReceiveCoilName": "NeckMatrix", + "PulseSequenceDetails": "%SiemensSeq%_tfl", + "PercentPhaseFOV": 81.25, + "PhaseEncodingSteps": 259, + "AcquisitionMatrixPE": 260, + "ReconMatrixPE": 320, + "ParallelReductionFactorInPlane": 2, + "PixelBandwidth": 150, + "DwellTime": 1.04e-05, + "ImageOrientationPatientDICOM": [ + 0, + 1, + -0.000349045, + 0, + -0.000349045, + -1 + ], + "InPlanePhaseEncodingDirectionDICOM": "ROW", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20171215 (OpenJPEG build) Clang8.1.0", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-amu01/anat/sub-amu01_space-other_T2star.json b/derivatives/data_preprocessed/sub-amu01/anat/sub-amu01_space-other_T2star.json index cbdd18d3d3..667eb85ced 100644 --- a/derivatives/data_preprocessed/sub-amu01/anat/sub-amu01_space-other_T2star.json +++ b/derivatives/data_preprocessed/sub-amu01/anat/sub-amu01_space-other_T2star.json @@ -67,5 +67,9 @@ "InPlanePhaseEncodingDirectionDICOM": "COL", "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20171215 (OpenJPEG build) Clang8.1.0", - "AcquisitionDuration": 290.0 + "AcquisitionDuration": 290.0, + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-amu01/anat/sub-amu01_space-other_T2w.json b/derivatives/data_preprocessed/sub-amu01/anat/sub-amu01_space-other_T2w.json index 723766a32d..ecc4ec3455 100644 --- a/derivatives/data_preprocessed/sub-amu01/anat/sub-amu01_space-other_T2w.json +++ b/derivatives/data_preprocessed/sub-amu01/anat/sub-amu01_space-other_T2w.json @@ -1,63 +1,75 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Verio", - "InstitutionName": "CEMEREM", - "InstitutionalDepartmentName": "CEMEREM", - "InstitutionAddress": "RUE_ST_PIERRE_264_MARSEILLE...92C536..._District_FR_13006", - "DeviceSerialNumber": "40146", - "StationName": "MRC40146", - "PatientPosition": "HFS", - "ProcedureStepDescription": "TEST_VC_SPINE", - "SoftwareVersions": "syngo_MR_B17", - "MRAcquisitionType": "3D", - "SeriesDescription": "T2w", - "ProtocolName": "T2w", - "ScanningSequence": "SE", - "SequenceVariant": "SK_SP", - "ScanOptions": "PFP", - "SequenceName": "_spcR3d1_87", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS2D"], - "SeriesNumber": 4, - "AcquisitionTime": "11:55:19.230000", - "AcquisitionNumber": 1, - "SliceThickness": 0.8, - "SAR": 0.693363, - "EchoTime": 0.12, - "RepetitionTime": 2, - "FlipAngle": 180, - "PartialFourier": 1, - "BaseResolution": 320, - "ShimSetting": [ - -5801, - 12836, - -12188, - -18, - -148, - 209, - 147, - 10 ], - "TxRefAmp": 443.821, - "PhaseResolution": 1.0125, - "ReceiveCoilName": "NeckMatrix", - "PulseSequenceDetails": "%SiemensSeq%_tse_vfl", - "PercentPhaseFOV": 100, - "EchoTrainLength": 87, - "PhaseEncodingSteps": 247, - "AcquisitionMatrixPE": 324, - "ReconMatrixPE": 320, - "ParallelReductionFactorInPlane": 2, - "PixelBandwidth": 625, - "DwellTime": 2.5e-06, - "ImageOrientationPatientDICOM": [ - 0, - 1, - 0, - 0, - 0, - -1 ], - "InPlanePhaseEncodingDirectionDICOM": "ROW", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20171215 (OpenJPEG build) Clang8.1.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Verio", + "InstitutionName": "CEMEREM", + "InstitutionalDepartmentName": "CEMEREM", + "InstitutionAddress": "RUE_ST_PIERRE_264_MARSEILLE...92C536..._District_FR_13006", + "DeviceSerialNumber": "40146", + "StationName": "MRC40146", + "PatientPosition": "HFS", + "ProcedureStepDescription": "TEST_VC_SPINE", + "SoftwareVersions": "syngo_MR_B17", + "MRAcquisitionType": "3D", + "SeriesDescription": "T2w", + "ProtocolName": "T2w", + "ScanningSequence": "SE", + "SequenceVariant": "SK_SP", + "ScanOptions": "PFP", + "SequenceName": "_spcR3d1_87", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS2D" + ], + "SeriesNumber": 4, + "AcquisitionTime": "11:55:19.230000", + "AcquisitionNumber": 1, + "SliceThickness": 0.8, + "SAR": 0.693363, + "EchoTime": 0.12, + "RepetitionTime": 2, + "FlipAngle": 180, + "PartialFourier": 1, + "BaseResolution": 320, + "ShimSetting": [ + -5801, + 12836, + -12188, + -18, + -148, + 209, + 147, + 10 + ], + "TxRefAmp": 443.821, + "PhaseResolution": 1.0125, + "ReceiveCoilName": "NeckMatrix", + "PulseSequenceDetails": "%SiemensSeq%_tse_vfl", + "PercentPhaseFOV": 100, + "EchoTrainLength": 87, + "PhaseEncodingSteps": 247, + "AcquisitionMatrixPE": 324, + "ReconMatrixPE": 320, + "ParallelReductionFactorInPlane": 2, + "PixelBandwidth": 625, + "DwellTime": 2.5e-06, + "ImageOrientationPatientDICOM": [ + 0, + 1, + 0, + 0, + 0, + -1 + ], + "InPlanePhaseEncodingDirectionDICOM": "ROW", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20171215 (OpenJPEG build) Clang8.1.0", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-amu02/anat/sub-amu02_flip-1_mt-on_space-other_MTS.json b/derivatives/data_preprocessed/sub-amu02/anat/sub-amu02_flip-1_mt-on_space-other_MTS.json index 7589ccdbc6..dd453fb721 100644 --- a/derivatives/data_preprocessed/sub-amu02/anat/sub-amu02_flip-1_mt-on_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-amu02/anat/sub-amu02_flip-1_mt-on_space-other_MTS.json @@ -1,62 +1,72 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Verio", - "InstitutionName": "CEMEREM", - "InstitutionalDepartmentName": "CEMEREM", - "InstitutionAddress": "RUE_ST_PIERRE_264_MARSEILLE...92C536..._District_FR_13006", - "DeviceSerialNumber": "40146", - "StationName": "MRC40146", - "PatientPosition": "HFS", - "ProcedureStepDescription": "TEST_VC_SPINE", - "SoftwareVersions": "syngo_MR_B17", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-MT1", - "ProtocolName": "GRE-MT1", - "ScanningSequence": "GR", - "SequenceVariant": "MTC_SP", - "ScanOptions": "MT", - "SequenceName": "_fl3d1", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "DIS2D"], - "SeriesNumber": 6, - "AcquisitionTime": "11:00:10.737500", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SAR": 0.578457, - "EchoTime": 0.0035, - "RepetitionTime": 0.035, - "FlipAngle": 9, - "PartialFourier": 1, - "BaseResolution": 256, - "ShimSetting": [ - -5779, - 12600, - -12091, - -60, - -66, - 433, - 850, - 24 ], - "TxRefAmp": 438.396, - "PhaseResolution": 1, - "ReceiveCoilName": "NeckMatrix", - "PulseSequenceDetails": "%SiemensSeq%_gre", - "PercentPhaseFOV": 100, - "PhaseEncodingSteps": 255, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 256, - "ParallelReductionFactorInPlane": 2, - "PixelBandwidth": 260, - "DwellTime": 7.5e-06, - "ImageOrientationPatientDICOM": [ - 1, - 2e-16, - 0, - -2e-16, - 0.961741, - -0.273959 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20171215 (OpenJPEG build) Clang8.1.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Verio", + "InstitutionName": "CEMEREM", + "InstitutionalDepartmentName": "CEMEREM", + "InstitutionAddress": "RUE_ST_PIERRE_264_MARSEILLE...92C536..._District_FR_13006", + "DeviceSerialNumber": "40146", + "StationName": "MRC40146", + "PatientPosition": "HFS", + "ProcedureStepDescription": "TEST_VC_SPINE", + "SoftwareVersions": "syngo_MR_B17", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-MT1", + "ProtocolName": "GRE-MT1", + "ScanningSequence": "GR", + "SequenceVariant": "MTC_SP", + "ScanOptions": "MT", + "SequenceName": "_fl3d1", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "DIS2D" + ], + "SeriesNumber": 6, + "AcquisitionTime": "11:00:10.737500", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SAR": 0.578457, + "EchoTime": 0.0035, + "RepetitionTime": 0.035, + "FlipAngle": 9, + "PartialFourier": 1, + "BaseResolution": 256, + "ShimSetting": [ + -5779, + 12600, + -12091, + -60, + -66, + 433, + 850, + 24 + ], + "TxRefAmp": 438.396, + "PhaseResolution": 1, + "ReceiveCoilName": "NeckMatrix", + "PulseSequenceDetails": "%SiemensSeq%_gre", + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 255, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "ParallelReductionFactorInPlane": 2, + "PixelBandwidth": 260, + "DwellTime": 7.5e-06, + "ImageOrientationPatientDICOM": [ + 1, + 2e-16, + 0, + -2e-16, + 0.961741, + -0.273959 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20171215 (OpenJPEG build) Clang8.1.0", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-amu02/anat/sub-amu02_flip-2_mt-off_space-other_MTS.json b/derivatives/data_preprocessed/sub-amu02/anat/sub-amu02_flip-2_mt-off_space-other_MTS.json index 85860fa226..dac7372681 100644 --- a/derivatives/data_preprocessed/sub-amu02/anat/sub-amu02_flip-2_mt-off_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-amu02/anat/sub-amu02_flip-2_mt-off_space-other_MTS.json @@ -1,61 +1,71 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Verio", - "InstitutionName": "CEMEREM", - "InstitutionalDepartmentName": "CEMEREM", - "InstitutionAddress": "RUE_ST_PIERRE_264_MARSEILLE...92C536..._District_FR_13006", - "DeviceSerialNumber": "40146", - "StationName": "MRC40146", - "PatientPosition": "HFS", - "ProcedureStepDescription": "TEST_VC_SPINE", - "SoftwareVersions": "syngo_MR_B17", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-T1w", - "ProtocolName": "GRE-T1w", - "ScanningSequence": "GR", - "SequenceVariant": "SP", - "SequenceName": "_fl3d1", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "DIS2D"], - "SeriesNumber": 8, - "AcquisitionTime": "11:04:37.232500", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SAR": 0.0375054, - "EchoTime": 0.0035, - "RepetitionTime": 0.015, - "FlipAngle": 15, - "PartialFourier": 1, - "BaseResolution": 256, - "ShimSetting": [ - -5779, - 12600, - -12091, - -60, - -66, - 433, - 850, - 24 ], - "TxRefAmp": 438.396, - "PhaseResolution": 1, - "ReceiveCoilName": "NeckMatrix", - "PulseSequenceDetails": "%SiemensSeq%_gre", - "PercentPhaseFOV": 100, - "PhaseEncodingSteps": 255, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 256, - "ParallelReductionFactorInPlane": 2, - "PixelBandwidth": 260, - "DwellTime": 7.5e-06, - "ImageOrientationPatientDICOM": [ - 1, - 2e-16, - 0, - -2e-16, - 0.961741, - -0.273959 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20171215 (OpenJPEG build) Clang8.1.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Verio", + "InstitutionName": "CEMEREM", + "InstitutionalDepartmentName": "CEMEREM", + "InstitutionAddress": "RUE_ST_PIERRE_264_MARSEILLE...92C536..._District_FR_13006", + "DeviceSerialNumber": "40146", + "StationName": "MRC40146", + "PatientPosition": "HFS", + "ProcedureStepDescription": "TEST_VC_SPINE", + "SoftwareVersions": "syngo_MR_B17", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-T1w", + "ProtocolName": "GRE-T1w", + "ScanningSequence": "GR", + "SequenceVariant": "SP", + "SequenceName": "_fl3d1", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "DIS2D" + ], + "SeriesNumber": 8, + "AcquisitionTime": "11:04:37.232500", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SAR": 0.0375054, + "EchoTime": 0.0035, + "RepetitionTime": 0.015, + "FlipAngle": 15, + "PartialFourier": 1, + "BaseResolution": 256, + "ShimSetting": [ + -5779, + 12600, + -12091, + -60, + -66, + 433, + 850, + 24 + ], + "TxRefAmp": 438.396, + "PhaseResolution": 1, + "ReceiveCoilName": "NeckMatrix", + "PulseSequenceDetails": "%SiemensSeq%_gre", + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 255, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "ParallelReductionFactorInPlane": 2, + "PixelBandwidth": 260, + "DwellTime": 7.5e-06, + "ImageOrientationPatientDICOM": [ + 1, + 2e-16, + 0, + -2e-16, + 0.961741, + -0.273959 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20171215 (OpenJPEG build) Clang8.1.0", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-amu02/anat/sub-amu02_space-other_T1w.json b/derivatives/data_preprocessed/sub-amu02/anat/sub-amu02_space-other_T1w.json index 62c35c6746..cfbc52af5b 100644 --- a/derivatives/data_preprocessed/sub-amu02/anat/sub-amu02_space-other_T1w.json +++ b/derivatives/data_preprocessed/sub-amu02/anat/sub-amu02_space-other_T1w.json @@ -1,63 +1,75 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Verio", - "InstitutionName": "CEMEREM", - "InstitutionalDepartmentName": "CEMEREM", - "InstitutionAddress": "RUE_ST_PIERRE_264_MARSEILLE...92C536..._District_FR_13006", - "DeviceSerialNumber": "40146", - "StationName": "MRC40146", - "PatientPosition": "HFS", - "ProcedureStepDescription": "TEST_VC_SPINE", - "SoftwareVersions": "syngo_MR_B17", - "MRAcquisitionType": "3D", - "SeriesDescription": "T1w", - "ProtocolName": "T1w", - "ScanningSequence": "GR_IR", - "SequenceVariant": "SP_MP", - "ScanOptions": "IR", - "SequenceName": "_tfl3d1", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS2D"], - "SeriesNumber": 2, - "AcquisitionTime": "10:41:55.962500", - "AcquisitionNumber": 1, - "SliceThickness": 1, - "SAR": 0.0520176, - "EchoTime": 0.00321, - "RepetitionTime": 2, - "InversionTime": 1, - "FlipAngle": 9, - "PartialFourier": 1, - "BaseResolution": 320, - "ShimSetting": [ - -5805, - 12765, - -11967, - 18, - -75, - 30, - 827, - 145 ], - "TxRefAmp": 418.459, - "PhaseResolution": 1, - "ReceiveCoilName": "NeckMatrix", - "PulseSequenceDetails": "%SiemensSeq%_tfl", - "PercentPhaseFOV": 81.25, - "PhaseEncodingSteps": 259, - "AcquisitionMatrixPE": 260, - "ReconMatrixPE": 320, - "ParallelReductionFactorInPlane": 2, - "PixelBandwidth": 150, - "DwellTime": 1.04e-05, - "ImageOrientationPatientDICOM": [ - 0, - 1, - -0.000349045, - 0, - -0.000349045, - -1 ], - "InPlanePhaseEncodingDirectionDICOM": "ROW", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20171215 (OpenJPEG build) Clang8.1.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Verio", + "InstitutionName": "CEMEREM", + "InstitutionalDepartmentName": "CEMEREM", + "InstitutionAddress": "RUE_ST_PIERRE_264_MARSEILLE...92C536..._District_FR_13006", + "DeviceSerialNumber": "40146", + "StationName": "MRC40146", + "PatientPosition": "HFS", + "ProcedureStepDescription": "TEST_VC_SPINE", + "SoftwareVersions": "syngo_MR_B17", + "MRAcquisitionType": "3D", + "SeriesDescription": "T1w", + "ProtocolName": "T1w", + "ScanningSequence": "GR_IR", + "SequenceVariant": "SP_MP", + "ScanOptions": "IR", + "SequenceName": "_tfl3d1", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS2D" + ], + "SeriesNumber": 2, + "AcquisitionTime": "10:41:55.962500", + "AcquisitionNumber": 1, + "SliceThickness": 1, + "SAR": 0.0520176, + "EchoTime": 0.00321, + "RepetitionTime": 2, + "InversionTime": 1, + "FlipAngle": 9, + "PartialFourier": 1, + "BaseResolution": 320, + "ShimSetting": [ + -5805, + 12765, + -11967, + 18, + -75, + 30, + 827, + 145 + ], + "TxRefAmp": 418.459, + "PhaseResolution": 1, + "ReceiveCoilName": "NeckMatrix", + "PulseSequenceDetails": "%SiemensSeq%_tfl", + 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"COL", "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20171215 (OpenJPEG build) Clang8.1.0", - "AcquisitionDuration": 290.0 + "AcquisitionDuration": 290.0, + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-amu02/anat/sub-amu02_space-other_T2w.json b/derivatives/data_preprocessed/sub-amu02/anat/sub-amu02_space-other_T2w.json index 00e89a06a5..82596dfb7b 100644 --- a/derivatives/data_preprocessed/sub-amu02/anat/sub-amu02_space-other_T2w.json +++ b/derivatives/data_preprocessed/sub-amu02/anat/sub-amu02_space-other_T2w.json @@ -1,63 +1,75 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Verio", - "InstitutionName": "CEMEREM", - "InstitutionalDepartmentName": "CEMEREM", - "InstitutionAddress": "RUE_ST_PIERRE_264_MARSEILLE...92C536..._District_FR_13006", - "DeviceSerialNumber": "40146", - "StationName": "MRC40146", - "PatientPosition": "HFS", - "ProcedureStepDescription": "TEST_VC_SPINE", - "SoftwareVersions": "syngo_MR_B17", - "MRAcquisitionType": "3D", - "SeriesDescription": "T2w", - "ProtocolName": "T2w", - "ScanningSequence": "SE", - "SequenceVariant": "SK_SP", - "ScanOptions": "PFP", - "SequenceName": "_spcR3d1_87", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS2D"], - "SeriesNumber": 3, - "AcquisitionTime": "10:47:5.307500", - "AcquisitionNumber": 1, - "SliceThickness": 0.8, - "SAR": 0.709744, - "EchoTime": 0.12, - "RepetitionTime": 2, - "FlipAngle": 180, - "PartialFourier": 1, - "BaseResolution": 320, - "ShimSetting": [ - -5801, - 12836, - -12188, - -18, - -148, - 209, - 147, - 10 ], - "TxRefAmp": 438.396, - "PhaseResolution": 1.0125, - "ReceiveCoilName": "NeckMatrix", - "PulseSequenceDetails": "%SiemensSeq%_tse_vfl", - "PercentPhaseFOV": 100, - "EchoTrainLength": 87, - "PhaseEncodingSteps": 247, - "AcquisitionMatrixPE": 324, - "ReconMatrixPE": 320, - "ParallelReductionFactorInPlane": 2, - "PixelBandwidth": 625, - "DwellTime": 2.5e-06, - "ImageOrientationPatientDICOM": [ - 0, - 1, - 0, - 0, - 0, - -1 ], - "InPlanePhaseEncodingDirectionDICOM": "ROW", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20171215 (OpenJPEG build) Clang8.1.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Verio", + "InstitutionName": "CEMEREM", + "InstitutionalDepartmentName": "CEMEREM", + "InstitutionAddress": "RUE_ST_PIERRE_264_MARSEILLE...92C536..._District_FR_13006", + "DeviceSerialNumber": "40146", + "StationName": "MRC40146", + "PatientPosition": "HFS", + "ProcedureStepDescription": "TEST_VC_SPINE", + "SoftwareVersions": "syngo_MR_B17", + "MRAcquisitionType": "3D", + "SeriesDescription": "T2w", + "ProtocolName": "T2w", + "ScanningSequence": "SE", + "SequenceVariant": "SK_SP", + "ScanOptions": "PFP", + "SequenceName": "_spcR3d1_87", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS2D" + ], + "SeriesNumber": 3, + "AcquisitionTime": "10:47:5.307500", + "AcquisitionNumber": 1, + "SliceThickness": 0.8, + "SAR": 0.709744, + "EchoTime": 0.12, + "RepetitionTime": 2, + "FlipAngle": 180, + "PartialFourier": 1, + "BaseResolution": 320, + "ShimSetting": [ + -5801, + 12836, + -12188, + -18, + -148, + 209, + 147, + 10 + ], + "TxRefAmp": 438.396, + "PhaseResolution": 1.0125, + "ReceiveCoilName": "NeckMatrix", + "PulseSequenceDetails": "%SiemensSeq%_tse_vfl", + "PercentPhaseFOV": 100, + "EchoTrainLength": 87, + "PhaseEncodingSteps": 247, + "AcquisitionMatrixPE": 324, + "ReconMatrixPE": 320, + "ParallelReductionFactorInPlane": 2, + "PixelBandwidth": 625, + "DwellTime": 2.5e-06, + "ImageOrientationPatientDICOM": [ + 0, + 1, + 0, + 0, + 0, + -1 + ], + "InPlanePhaseEncodingDirectionDICOM": "ROW", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20171215 (OpenJPEG build) Clang8.1.0", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-amu03/anat/sub-amu03_flip-1_mt-on_space-other_MTS.json b/derivatives/data_preprocessed/sub-amu03/anat/sub-amu03_flip-1_mt-on_space-other_MTS.json index 94d438476a..a9be410a83 100644 --- a/derivatives/data_preprocessed/sub-amu03/anat/sub-amu03_flip-1_mt-on_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-amu03/anat/sub-amu03_flip-1_mt-on_space-other_MTS.json @@ -1,62 +1,72 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Verio", - "InstitutionName": "CEMEREM", - "InstitutionalDepartmentName": "CEMEREM", - "InstitutionAddress": "RUE_ST_PIERRE_264_MARSEILLE...92C536..._District_FR_13006", - "DeviceSerialNumber": "40146", - "StationName": "MRC40146", - "PatientPosition": "HFS", - "ProcedureStepDescription": "MOELLE_CRMBM_SPINE_SOP", - "SoftwareVersions": "syngo_MR_B17", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-MT1", - "ProtocolName": "GRE-MT1", - "ScanningSequence": "GR", - "SequenceVariant": "MTC_SP", - "ScanOptions": "MT", - "SequenceName": "_fl3d1", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "DIS2D"], - "SeriesNumber": 6, - "AcquisitionTime": "11:59:29.767500", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SAR": 0.79149, - "EchoTime": 0.0035, - "RepetitionTime": 0.035, - "FlipAngle": 9, - "PartialFourier": 1, - "BaseResolution": 256, - "ShimSetting": [ - -5816, - 12804, - -11990, - -271, - -383, - 1961, - 156, - -271 ], - "TxRefAmp": 431.53, - "PhaseResolution": 1, - "ReceiveCoilName": "NeckMatrix", - "PulseSequenceDetails": "%SiemensSeq%_gre", - "PercentPhaseFOV": 100, - "PhaseEncodingSteps": 255, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 256, - "ParallelReductionFactorInPlane": 2, - "PixelBandwidth": 260, - "DwellTime": 7.5e-06, - "ImageOrientationPatientDICOM": [ - 0.998345, - -0.00271308, - 0.0574361, - -3.20917e-08, - 0.998886, - 0.0471845 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20171215 (OpenJPEG build) Clang8.1.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Verio", + "InstitutionName": "CEMEREM", + "InstitutionalDepartmentName": "CEMEREM", + "InstitutionAddress": "RUE_ST_PIERRE_264_MARSEILLE...92C536..._District_FR_13006", + "DeviceSerialNumber": "40146", + "StationName": "MRC40146", + "PatientPosition": "HFS", + "ProcedureStepDescription": "MOELLE_CRMBM_SPINE_SOP", + "SoftwareVersions": "syngo_MR_B17", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-MT1", + "ProtocolName": "GRE-MT1", + "ScanningSequence": "GR", + "SequenceVariant": "MTC_SP", + "ScanOptions": "MT", + "SequenceName": "_fl3d1", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "DIS2D" + ], + "SeriesNumber": 6, + "AcquisitionTime": "11:59:29.767500", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SAR": 0.79149, + "EchoTime": 0.0035, + "RepetitionTime": 0.035, + "FlipAngle": 9, + "PartialFourier": 1, + "BaseResolution": 256, + "ShimSetting": [ + -5816, + 12804, + -11990, + -271, + -383, + 1961, + 156, + -271 + ], + "TxRefAmp": 431.53, + "PhaseResolution": 1, + "ReceiveCoilName": "NeckMatrix", + "PulseSequenceDetails": "%SiemensSeq%_gre", + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 255, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "ParallelReductionFactorInPlane": 2, + "PixelBandwidth": 260, + "DwellTime": 7.5e-06, + "ImageOrientationPatientDICOM": [ + 0.998345, + -0.00271308, + 0.0574361, + -3.20917e-08, + 0.998886, + 0.0471845 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20171215 (OpenJPEG build) Clang8.1.0", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-amu03/anat/sub-amu03_flip-2_mt-off_space-other_MTS.json b/derivatives/data_preprocessed/sub-amu03/anat/sub-amu03_flip-2_mt-off_space-other_MTS.json index 0c4e21c4d8..eaad331cfd 100644 --- a/derivatives/data_preprocessed/sub-amu03/anat/sub-amu03_flip-2_mt-off_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-amu03/anat/sub-amu03_flip-2_mt-off_space-other_MTS.json @@ -1,61 +1,71 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Verio", - "InstitutionName": "CEMEREM", - "InstitutionalDepartmentName": "CEMEREM", - "InstitutionAddress": "RUE_ST_PIERRE_264_MARSEILLE...92C536..._District_FR_13006", - "DeviceSerialNumber": "40146", - "StationName": "MRC40146", - "PatientPosition": "HFS", - "ProcedureStepDescription": "MOELLE_CRMBM_SPINE_SOP", - "SoftwareVersions": "syngo_MR_B17", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-T1w", - "ProtocolName": "GRE-T1w", - "ScanningSequence": "GR", - "SequenceVariant": "SP", - "SequenceName": "_fl3d1", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "DIS2D"], - "SeriesNumber": 8, - "AcquisitionTime": "12:03:57.230000", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SAR": 0.0513179, - "EchoTime": 0.0035, - "RepetitionTime": 0.015, - "FlipAngle": 15, - "PartialFourier": 1, - "BaseResolution": 256, - "ShimSetting": [ - -5816, - 12804, - -11990, - -271, - -383, - 1961, - 156, - -271 ], - "TxRefAmp": 431.53, - "PhaseResolution": 1, - "ReceiveCoilName": "NeckMatrix", - "PulseSequenceDetails": "%SiemensSeq%_gre", - "PercentPhaseFOV": 100, - "PhaseEncodingSteps": 255, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 256, - "ParallelReductionFactorInPlane": 2, - "PixelBandwidth": 260, - "DwellTime": 7.5e-06, - "ImageOrientationPatientDICOM": [ - 0.998345, - -0.00271308, - 0.0574361, - -3.20917e-08, - 0.998886, - 0.0471845 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20171215 (OpenJPEG build) Clang8.1.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Verio", + "InstitutionName": "CEMEREM", + "InstitutionalDepartmentName": "CEMEREM", + "InstitutionAddress": "RUE_ST_PIERRE_264_MARSEILLE...92C536..._District_FR_13006", + "DeviceSerialNumber": "40146", + "StationName": "MRC40146", + "PatientPosition": "HFS", + "ProcedureStepDescription": "MOELLE_CRMBM_SPINE_SOP", + "SoftwareVersions": "syngo_MR_B17", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-T1w", + "ProtocolName": "GRE-T1w", + "ScanningSequence": "GR", + "SequenceVariant": "SP", + "SequenceName": "_fl3d1", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "DIS2D" + ], + "SeriesNumber": 8, + "AcquisitionTime": "12:03:57.230000", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SAR": 0.0513179, + "EchoTime": 0.0035, + "RepetitionTime": 0.015, + "FlipAngle": 15, + "PartialFourier": 1, + 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100644 --- a/derivatives/data_preprocessed/sub-amu03/anat/sub-amu03_space-other_T1w.json +++ b/derivatives/data_preprocessed/sub-amu03/anat/sub-amu03_space-other_T1w.json @@ -1,63 +1,75 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Verio", - "InstitutionName": "CEMEREM", - "InstitutionalDepartmentName": "CEMEREM", - "InstitutionAddress": "RUE_ST_PIERRE_264_MARSEILLE...92C536..._District_FR_13006", - "DeviceSerialNumber": "40146", - "StationName": "MRC40146", - "PatientPosition": "HFS", - "ProcedureStepDescription": "MOELLE_CRMBM_SPINE_SOP", - "SoftwareVersions": "syngo_MR_B17", - "MRAcquisitionType": "3D", - "SeriesDescription": "T1w", - "ProtocolName": "T1w", - "ScanningSequence": "GR_IR", - "SequenceVariant": "SP_MP", - "ScanOptions": "IR", - "SequenceName": "_tfl3d1", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS2D"], - "SeriesNumber": 2, - "AcquisitionTime": "11:39:56.955000", - "AcquisitionNumber": 1, - "SliceThickness": 1, - "SAR": 0.11521, - "EchoTime": 0.00321, - "RepetitionTime": 2, - "InversionTime": 1, - "FlipAngle": 9, - "PartialFourier": 1, - "BaseResolution": 320, - "ShimSetting": [ - -5806, - 12758, - -12015, - -105, - -194, - -110, - 964, - -31 ], - "TxRefAmp": 497.131, - "PhaseResolution": 1, - "ReceiveCoilName": "NeckMatrix", - "PulseSequenceDetails": "%SiemensSeq%_tfl", - "PercentPhaseFOV": 81.25, - "PhaseEncodingSteps": 259, - "AcquisitionMatrixPE": 260, - "ReconMatrixPE": 320, - "ParallelReductionFactorInPlane": 2, - "PixelBandwidth": 150, - "DwellTime": 1.04e-05, - "ImageOrientationPatientDICOM": [ - 2.01177e-05, - 1, - -0.00034855, - 0.057564, - -0.000349131, - -0.998342 ], - "InPlanePhaseEncodingDirectionDICOM": "ROW", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20171215 (OpenJPEG build) Clang8.1.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Verio", + "InstitutionName": "CEMEREM", + "InstitutionalDepartmentName": "CEMEREM", + "InstitutionAddress": "RUE_ST_PIERRE_264_MARSEILLE...92C536..._District_FR_13006", + "DeviceSerialNumber": "40146", + "StationName": "MRC40146", + "PatientPosition": "HFS", + "ProcedureStepDescription": "MOELLE_CRMBM_SPINE_SOP", + "SoftwareVersions": "syngo_MR_B17", + "MRAcquisitionType": "3D", + "SeriesDescription": "T1w", + "ProtocolName": "T1w", + "ScanningSequence": "GR_IR", + "SequenceVariant": "SP_MP", + "ScanOptions": "IR", + "SequenceName": "_tfl3d1", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS2D" + ], + "SeriesNumber": 2, + "AcquisitionTime": "11:39:56.955000", + "AcquisitionNumber": 1, + "SliceThickness": 1, + "SAR": 0.11521, + "EchoTime": 0.00321, + "RepetitionTime": 2, + "InversionTime": 1, + "FlipAngle": 9, + "PartialFourier": 1, + "BaseResolution": 320, + "ShimSetting": [ + -5806, + 12758, + -12015, + -105, + -194, + -110, + 964, + -31 + ], + "TxRefAmp": 497.131, + "PhaseResolution": 1, + "ReceiveCoilName": "NeckMatrix", + "PulseSequenceDetails": "%SiemensSeq%_tfl", + "PercentPhaseFOV": 81.25, + "PhaseEncodingSteps": 259, + "AcquisitionMatrixPE": 260, + "ReconMatrixPE": 320, + "ParallelReductionFactorInPlane": 2, + "PixelBandwidth": 150, + "DwellTime": 1.04e-05, + "ImageOrientationPatientDICOM": [ + 2.01177e-05, + 1, + -0.00034855, + 0.057564, + -0.000349131, + -0.998342 + ], + "InPlanePhaseEncodingDirectionDICOM": "ROW", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20171215 (OpenJPEG build) Clang8.1.0", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-amu03/anat/sub-amu03_space-other_T2star.json b/derivatives/data_preprocessed/sub-amu03/anat/sub-amu03_space-other_T2star.json index f018f1c37f..bc6cc71cda 100644 --- a/derivatives/data_preprocessed/sub-amu03/anat/sub-amu03_space-other_T2star.json +++ b/derivatives/data_preprocessed/sub-amu03/anat/sub-amu03_space-other_T2star.json @@ -68,5 +68,9 @@ "InPlanePhaseEncodingDirectionDICOM": "COL", "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20171215 (OpenJPEG build) Clang8.1.0", - "AcquisitionDuration": 290.0 + "AcquisitionDuration": 290.0, + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-amu03/anat/sub-amu03_space-other_T2w.json b/derivatives/data_preprocessed/sub-amu03/anat/sub-amu03_space-other_T2w.json index 53b48d2f1c..ddf17484ac 100644 --- a/derivatives/data_preprocessed/sub-amu03/anat/sub-amu03_space-other_T2w.json +++ b/derivatives/data_preprocessed/sub-amu03/anat/sub-amu03_space-other_T2w.json @@ -1,63 +1,75 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Verio", - "InstitutionName": "CEMEREM", - "InstitutionalDepartmentName": "CEMEREM", - "InstitutionAddress": "RUE_ST_PIERRE_264_MARSEILLE...92C536..._District_FR_13006", - "DeviceSerialNumber": "40146", - "StationName": "MRC40146", - "PatientPosition": "HFS", - "ProcedureStepDescription": "MOELLE_CRMBM_SPINE_SOP", - "SoftwareVersions": "syngo_MR_B17", - "MRAcquisitionType": "3D", - "SeriesDescription": "T2w", - "ProtocolName": "T2w", - "ScanningSequence": "SE", - "SequenceVariant": "SK_SP", - "ScanOptions": "PFP", - "SequenceName": "_spcR3d1_87", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS2D"], - "SeriesNumber": 3, - "AcquisitionTime": "11:46:25.177500", - "AcquisitionNumber": 1, - "SliceThickness": 0.8, - "SAR": 1.04511, - "EchoTime": 0.12, - "RepetitionTime": 2, - "FlipAngle": 135, - "PartialFourier": 1, - "BaseResolution": 320, - "ShimSetting": [ - -5801, - 12836, - -12188, - -18, - -148, - 209, - 147, - 10 ], - "TxRefAmp": 576.341, - "PhaseResolution": 1.0125, - "ReceiveCoilName": "NeckMatrix", - "PulseSequenceDetails": "%SiemensSeq%_tse_vfl", - "PercentPhaseFOV": 100, - "EchoTrainLength": 87, - "PhaseEncodingSteps": 247, - "AcquisitionMatrixPE": 324, - "ReconMatrixPE": 320, - "ParallelReductionFactorInPlane": 2, - "PixelBandwidth": 625, - "DwellTime": 2.5e-06, - "ImageOrientationPatientDICOM": [ - 2.01177e-05, - 1, - -0.00034855, - 0.057564, - -0.000349131, - -0.998342 ], - "InPlanePhaseEncodingDirectionDICOM": "ROW", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20171215 (OpenJPEG build) Clang8.1.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Verio", + "InstitutionName": "CEMEREM", + "InstitutionalDepartmentName": "CEMEREM", + "InstitutionAddress": "RUE_ST_PIERRE_264_MARSEILLE...92C536..._District_FR_13006", + "DeviceSerialNumber": "40146", + "StationName": "MRC40146", + "PatientPosition": "HFS", + "ProcedureStepDescription": "MOELLE_CRMBM_SPINE_SOP", + "SoftwareVersions": "syngo_MR_B17", + "MRAcquisitionType": "3D", + "SeriesDescription": "T2w", + "ProtocolName": "T2w", + "ScanningSequence": "SE", + "SequenceVariant": "SK_SP", + "ScanOptions": "PFP", + "SequenceName": "_spcR3d1_87", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS2D" + ], + "SeriesNumber": 3, + "AcquisitionTime": "11:46:25.177500", + "AcquisitionNumber": 1, + "SliceThickness": 0.8, + "SAR": 1.04511, + "EchoTime": 0.12, + "RepetitionTime": 2, + "FlipAngle": 135, + "PartialFourier": 1, + "BaseResolution": 320, + "ShimSetting": [ + -5801, + 12836, + -12188, + -18, + -148, + 209, + 147, + 10 + ], + "TxRefAmp": 576.341, + "PhaseResolution": 1.0125, + "ReceiveCoilName": "NeckMatrix", + "PulseSequenceDetails": "%SiemensSeq%_tse_vfl", + "PercentPhaseFOV": 100, + "EchoTrainLength": 87, + "PhaseEncodingSteps": 247, + "AcquisitionMatrixPE": 324, + "ReconMatrixPE": 320, + "ParallelReductionFactorInPlane": 2, + "PixelBandwidth": 625, + "DwellTime": 2.5e-06, + "ImageOrientationPatientDICOM": [ + 2.01177e-05, + 1, + -0.00034855, + 0.057564, + -0.000349131, + -0.998342 + ], + "InPlanePhaseEncodingDirectionDICOM": "ROW", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20171215 (OpenJPEG build) Clang8.1.0", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-amu04/anat/sub-amu04_flip-1_mt-on_space-other_MTS.json b/derivatives/data_preprocessed/sub-amu04/anat/sub-amu04_flip-1_mt-on_space-other_MTS.json index 31ac9e8c4a..278b576ca5 100644 --- a/derivatives/data_preprocessed/sub-amu04/anat/sub-amu04_flip-1_mt-on_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-amu04/anat/sub-amu04_flip-1_mt-on_space-other_MTS.json @@ -1,62 +1,72 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Verio", - "InstitutionName": "CEMEREM", - "InstitutionalDepartmentName": "CEMEREM", - "InstitutionAddress": "RUE_ST_PIERRE_264_MARSEILLE...92C536..._District_FR_13006", - "DeviceSerialNumber": "40146", - "StationName": "MRC40146", - "PatientPosition": "HFS", - "ProcedureStepDescription": "TEST_VC_TEST_moelle", - "SoftwareVersions": "syngo_MR_B17", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-MT1", - "ProtocolName": "GRE-MT1", - "ScanningSequence": "GR", - "SequenceVariant": "MTC_SP", - "ScanOptions": "MT", - "SequenceName": "_fl3d1", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "DIS2D"], - "SeriesNumber": 6, - "AcquisitionTime": "15:39:14.770000", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SAR": 0.526084, - "EchoTime": 0.0035, - "RepetitionTime": 0.035, - "FlipAngle": 9, - "PartialFourier": 1, - "BaseResolution": 256, - "ShimSetting": [ - -5747, - 12537, - -11907, - -96, - 71, - 1265, - 749, - 95 ], - "TxRefAmp": 444.28, - "PhaseResolution": 1, - "ReceiveCoilName": "NeckMatrix", - "PulseSequenceDetails": "%SiemensSeq%_gre", - "PercentPhaseFOV": 100, - "PhaseEncodingSteps": 255, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 256, - "ParallelReductionFactorInPlane": 2, - "PixelBandwidth": 260, - "DwellTime": 7.5e-06, - "ImageOrientationPatientDICOM": [ - 1, - 0, - 0, - 0, - 1, - 0 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Verio", + "InstitutionName": "CEMEREM", + "InstitutionalDepartmentName": "CEMEREM", + "InstitutionAddress": "RUE_ST_PIERRE_264_MARSEILLE...92C536..._District_FR_13006", + "DeviceSerialNumber": "40146", + "StationName": "MRC40146", + "PatientPosition": "HFS", + "ProcedureStepDescription": "TEST_VC_TEST_moelle", + "SoftwareVersions": "syngo_MR_B17", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-MT1", + "ProtocolName": "GRE-MT1", + "ScanningSequence": "GR", + "SequenceVariant": "MTC_SP", + "ScanOptions": "MT", + "SequenceName": "_fl3d1", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "DIS2D" + ], + "SeriesNumber": 6, + "AcquisitionTime": "15:39:14.770000", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SAR": 0.526084, + "EchoTime": 0.0035, + "RepetitionTime": 0.035, + "FlipAngle": 9, + "PartialFourier": 1, + "BaseResolution": 256, + "ShimSetting": [ + -5747, + 12537, + -11907, + -96, + 71, + 1265, + 749, + 95 + ], + "TxRefAmp": 444.28, + "PhaseResolution": 1, + "ReceiveCoilName": "NeckMatrix", + "PulseSequenceDetails": "%SiemensSeq%_gre", + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 255, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "ParallelReductionFactorInPlane": 2, + "PixelBandwidth": 260, + "DwellTime": 7.5e-06, + "ImageOrientationPatientDICOM": [ + 1, + 0, + 0, + 0, + 1, + 0 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-amu04/anat/sub-amu04_flip-2_mt-off_space-other_MTS.json b/derivatives/data_preprocessed/sub-amu04/anat/sub-amu04_flip-2_mt-off_space-other_MTS.json index 2d0ba3e821..be1e1bf2c0 100644 --- a/derivatives/data_preprocessed/sub-amu04/anat/sub-amu04_flip-2_mt-off_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-amu04/anat/sub-amu04_flip-2_mt-off_space-other_MTS.json @@ -1,61 +1,71 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Verio", - "InstitutionName": "CEMEREM", - "InstitutionalDepartmentName": "CEMEREM", - "InstitutionAddress": "RUE_ST_PIERRE_264_MARSEILLE...92C536..._District_FR_13006", - "DeviceSerialNumber": "40146", - "StationName": "MRC40146", - "PatientPosition": "HFS", - "ProcedureStepDescription": "TEST_VC_TEST_moelle", - "SoftwareVersions": "syngo_MR_B17", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-T1w", - "ProtocolName": "GRE-T1w", - "ScanningSequence": "GR", - "SequenceVariant": "SP", - "SequenceName": "_fl3d1", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "DIS2D"], - "SeriesNumber": 8, - "AcquisitionTime": "15:43:42.252500", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SAR": 0.0341097, - "EchoTime": 0.0035, - "RepetitionTime": 0.015, - "FlipAngle": 15, - "PartialFourier": 1, - "BaseResolution": 256, - "ShimSetting": [ - -5747, - 12537, - -11907, - -96, - 71, - 1265, - 749, - 95 ], - "TxRefAmp": 444.28, - "PhaseResolution": 1, - "ReceiveCoilName": "NeckMatrix", - "PulseSequenceDetails": "%SiemensSeq%_gre", - "PercentPhaseFOV": 100, - "PhaseEncodingSteps": 255, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 256, - "ParallelReductionFactorInPlane": 2, - "PixelBandwidth": 260, - "DwellTime": 7.5e-06, - "ImageOrientationPatientDICOM": [ - 1, - 0, - 0, - 0, - 1, - 0 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Verio", + "InstitutionName": "CEMEREM", + "InstitutionalDepartmentName": "CEMEREM", + "InstitutionAddress": "RUE_ST_PIERRE_264_MARSEILLE...92C536..._District_FR_13006", + "DeviceSerialNumber": "40146", + "StationName": "MRC40146", + "PatientPosition": "HFS", + "ProcedureStepDescription": "TEST_VC_TEST_moelle", + "SoftwareVersions": "syngo_MR_B17", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-T1w", + "ProtocolName": "GRE-T1w", + "ScanningSequence": "GR", + "SequenceVariant": "SP", + "SequenceName": "_fl3d1", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "DIS2D" + ], + "SeriesNumber": 8, + "AcquisitionTime": "15:43:42.252500", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SAR": 0.0341097, + "EchoTime": 0.0035, + "RepetitionTime": 0.015, + "FlipAngle": 15, + "PartialFourier": 1, + "BaseResolution": 256, + "ShimSetting": [ + -5747, + 12537, + -11907, + -96, + 71, + 1265, + 749, + 95 + ], + "TxRefAmp": 444.28, + "PhaseResolution": 1, + "ReceiveCoilName": "NeckMatrix", + "PulseSequenceDetails": "%SiemensSeq%_gre", + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 255, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "ParallelReductionFactorInPlane": 2, + "PixelBandwidth": 260, + "DwellTime": 7.5e-06, + "ImageOrientationPatientDICOM": [ + 1, + 0, + 0, + 0, + 1, + 0 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-amu04/anat/sub-amu04_space-other_T1w.json b/derivatives/data_preprocessed/sub-amu04/anat/sub-amu04_space-other_T1w.json index a7b44d0066..9bf5f5c406 100644 --- a/derivatives/data_preprocessed/sub-amu04/anat/sub-amu04_space-other_T1w.json +++ b/derivatives/data_preprocessed/sub-amu04/anat/sub-amu04_space-other_T1w.json @@ -1,63 +1,75 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Verio", - "InstitutionName": "CEMEREM", - "InstitutionalDepartmentName": "CEMEREM", - "InstitutionAddress": "RUE_ST_PIERRE_264_MARSEILLE...92C536..._District_FR_13006", - "DeviceSerialNumber": "40146", - "StationName": "MRC40146", - "PatientPosition": "HFS", - "ProcedureStepDescription": "TEST_VC_TEST_moelle", - "SoftwareVersions": "syngo_MR_B17", - "MRAcquisitionType": "3D", - "SeriesDescription": "T1w", - "ProtocolName": "T1w", - "ScanningSequence": "GR_IR", - "SequenceVariant": "SP_MP", - "ScanOptions": "IR", - "SequenceName": "_tfl3d1", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS2D"], - "SeriesNumber": 2, - "AcquisitionTime": "15:20:36.682500", - "AcquisitionNumber": 1, - "SliceThickness": 1, - "SAR": 0.0471589, - "EchoTime": 0.00321, - "RepetitionTime": 2, - "InversionTime": 1, - "FlipAngle": 9, - "PartialFourier": 1, - "BaseResolution": 320, - "ShimSetting": [ - -5780, - 12749, - -11900, - 95, - -44, - 90, - 823, - 91 ], - "TxRefAmp": 420.996, - "PhaseResolution": 1, - "ReceiveCoilName": "NeckMatrix", - "PulseSequenceDetails": "%SiemensSeq%_tfl", - "PercentPhaseFOV": 81.25, - "PhaseEncodingSteps": 259, - "AcquisitionMatrixPE": 260, - "ReconMatrixPE": 320, - "ParallelReductionFactorInPlane": 2, - "PixelBandwidth": 150, - "DwellTime": 1.04e-05, - "ImageOrientationPatientDICOM": [ - 4.91052e-06, - 1, - -0.000349049, - 0.0139622, - -0.000349083, - -0.999902 ], - "InPlanePhaseEncodingDirectionDICOM": "ROW", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Verio", + "InstitutionName": "CEMEREM", + "InstitutionalDepartmentName": "CEMEREM", + "InstitutionAddress": "RUE_ST_PIERRE_264_MARSEILLE...92C536..._District_FR_13006", + "DeviceSerialNumber": "40146", + "StationName": "MRC40146", + "PatientPosition": "HFS", + "ProcedureStepDescription": "TEST_VC_TEST_moelle", + "SoftwareVersions": "syngo_MR_B17", + "MRAcquisitionType": "3D", + "SeriesDescription": "T1w", + "ProtocolName": "T1w", + "ScanningSequence": "GR_IR", + "SequenceVariant": "SP_MP", + "ScanOptions": "IR", + "SequenceName": "_tfl3d1", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS2D" + ], + "SeriesNumber": 2, + "AcquisitionTime": "15:20:36.682500", + "AcquisitionNumber": 1, + "SliceThickness": 1, + "SAR": 0.0471589, + "EchoTime": 0.00321, + "RepetitionTime": 2, + "InversionTime": 1, + "FlipAngle": 9, + "PartialFourier": 1, + "BaseResolution": 320, + "ShimSetting": [ + -5780, + 12749, + -11900, + 95, + -44, + 90, + 823, + 91 + ], + "TxRefAmp": 420.996, + "PhaseResolution": 1, + "ReceiveCoilName": "NeckMatrix", + "PulseSequenceDetails": "%SiemensSeq%_tfl", + "PercentPhaseFOV": 81.25, + "PhaseEncodingSteps": 259, + "AcquisitionMatrixPE": 260, + "ReconMatrixPE": 320, + "ParallelReductionFactorInPlane": 2, + "PixelBandwidth": 150, + "DwellTime": 1.04e-05, + "ImageOrientationPatientDICOM": [ + 4.91052e-06, + 1, + -0.000349049, + 0.0139622, + -0.000349083, + -0.999902 + ], + "InPlanePhaseEncodingDirectionDICOM": "ROW", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-amu04/anat/sub-amu04_space-other_T2star.json b/derivatives/data_preprocessed/sub-amu04/anat/sub-amu04_space-other_T2star.json index 93cf6e496a..862cd25176 100644 --- a/derivatives/data_preprocessed/sub-amu04/anat/sub-amu04_space-other_T2star.json +++ b/derivatives/data_preprocessed/sub-amu04/anat/sub-amu04_space-other_T2star.json @@ -68,5 +68,9 @@ "InPlanePhaseEncodingDirectionDICOM": "COL", "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0", - "AcquisitionDuration": 290.0 + "AcquisitionDuration": 290.0, + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-amu04/anat/sub-amu04_space-other_T2w.json b/derivatives/data_preprocessed/sub-amu04/anat/sub-amu04_space-other_T2w.json index 95c2e54656..f312e37327 100644 --- a/derivatives/data_preprocessed/sub-amu04/anat/sub-amu04_space-other_T2w.json +++ b/derivatives/data_preprocessed/sub-amu04/anat/sub-amu04_space-other_T2w.json @@ -1,63 +1,75 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Verio", - "InstitutionName": "CEMEREM", - "InstitutionalDepartmentName": "CEMEREM", - "InstitutionAddress": "RUE_ST_PIERRE_264_MARSEILLE...92C536..._District_FR_13006", - "DeviceSerialNumber": "40146", - "StationName": "MRC40146", - "PatientPosition": "HFS", - "ProcedureStepDescription": "TEST_VC_TEST_moelle", - "SoftwareVersions": "syngo_MR_B17", - "MRAcquisitionType": "3D", - "SeriesDescription": "T2w", - "ProtocolName": "T2w", - "ScanningSequence": "SE", - "SequenceVariant": "SK_SP", - "ScanOptions": "PFP", - "SequenceName": "_spcR3d1_87", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS2D"], - "SeriesNumber": 3, - "AcquisitionTime": "15:25:50.220000", - "AcquisitionNumber": 1, - "SliceThickness": 0.8, - "SAR": 0.668636, - "EchoTime": 0.12, - "RepetitionTime": 2, - "FlipAngle": 180, - "PartialFourier": 1, - "BaseResolution": 320, - "ShimSetting": [ - -5801, - 12836, - -12188, - -18, - -148, - 209, - 147, - 10 ], - "TxRefAmp": 425.363, - "PhaseResolution": 1.0125, - "ReceiveCoilName": "NeckMatrix", - "PulseSequenceDetails": "%SiemensSeq%_tse_vfl", - "PercentPhaseFOV": 100, - "EchoTrainLength": 87, - "PhaseEncodingSteps": 247, - "AcquisitionMatrixPE": 324, - "ReconMatrixPE": 320, - "ParallelReductionFactorInPlane": 2, - "PixelBandwidth": 625, - "DwellTime": 2.5e-06, - "ImageOrientationPatientDICOM": [ - 4.91052e-06, - 1, - -0.000349049, - 0.0139622, - -0.000349083, - -0.999902 ], - "InPlanePhaseEncodingDirectionDICOM": "ROW", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Verio", + "InstitutionName": "CEMEREM", + "InstitutionalDepartmentName": "CEMEREM", + "InstitutionAddress": "RUE_ST_PIERRE_264_MARSEILLE...92C536..._District_FR_13006", + "DeviceSerialNumber": "40146", + "StationName": "MRC40146", + "PatientPosition": "HFS", + "ProcedureStepDescription": "TEST_VC_TEST_moelle", + "SoftwareVersions": "syngo_MR_B17", + "MRAcquisitionType": "3D", + "SeriesDescription": "T2w", + "ProtocolName": "T2w", + "ScanningSequence": "SE", + "SequenceVariant": "SK_SP", + "ScanOptions": "PFP", + "SequenceName": "_spcR3d1_87", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS2D" + ], + "SeriesNumber": 3, + "AcquisitionTime": "15:25:50.220000", + "AcquisitionNumber": 1, + "SliceThickness": 0.8, + "SAR": 0.668636, + "EchoTime": 0.12, + "RepetitionTime": 2, + "FlipAngle": 180, + "PartialFourier": 1, + "BaseResolution": 320, + "ShimSetting": [ + -5801, + 12836, + -12188, + -18, + -148, + 209, + 147, + 10 + ], + "TxRefAmp": 425.363, + "PhaseResolution": 1.0125, + "ReceiveCoilName": "NeckMatrix", + "PulseSequenceDetails": "%SiemensSeq%_tse_vfl", + "PercentPhaseFOV": 100, + "EchoTrainLength": 87, + "PhaseEncodingSteps": 247, + "AcquisitionMatrixPE": 324, + "ReconMatrixPE": 320, + "ParallelReductionFactorInPlane": 2, + "PixelBandwidth": 625, + "DwellTime": 2.5e-06, + "ImageOrientationPatientDICOM": [ + 4.91052e-06, + 1, + -0.000349049, + 0.0139622, + -0.000349083, + -0.999902 + ], + "InPlanePhaseEncodingDirectionDICOM": "ROW", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-amu05/anat/sub-amu05_flip-1_mt-on_space-other_MTS.json b/derivatives/data_preprocessed/sub-amu05/anat/sub-amu05_flip-1_mt-on_space-other_MTS.json index ca5252569d..9e47166a64 100644 --- a/derivatives/data_preprocessed/sub-amu05/anat/sub-amu05_flip-1_mt-on_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-amu05/anat/sub-amu05_flip-1_mt-on_space-other_MTS.json @@ -1,62 +1,72 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Verio", - "InstitutionName": "CEMEREM", - "InstitutionalDepartmentName": "CEMEREM", - "InstitutionAddress": "RUE_ST_PIERRE_264_MARSEILLE...92C536..._District_FR_13006", - "DeviceSerialNumber": "40146", - "StationName": "MRC40146", - "PatientPosition": "HFS", - "ProcedureStepDescription": "TEST_VC_SPINE", - "SoftwareVersions": "syngo_MR_B17", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-MT1", - "ProtocolName": "GRE-MT1", - "ScanningSequence": "GR", - "SequenceVariant": "MTC_SP", - "ScanOptions": "MT", - "SequenceName": "_fl3d1", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "DIS2D"], - "SeriesNumber": 6, - "AcquisitionTime": "14:58:5.737500", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SAR": 0.514312, - "EchoTime": 0.0035, - "RepetitionTime": 0.035, - "FlipAngle": 9, - "PartialFourier": 1, - "BaseResolution": 256, - "ShimSetting": [ - -5800, - 12560, - -12058, - -175, - -411, - 2177, - 933, - 28 ], - "TxRefAmp": 453.119, - "PhaseResolution": 1, - "ReceiveCoilName": "NeckMatrix", - "PulseSequenceDetails": "%SiemensSeq%_gre", - "PercentPhaseFOV": 100, - "PhaseEncodingSteps": 255, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 256, - "ParallelReductionFactorInPlane": 2, - "PixelBandwidth": 260, - "DwellTime": 7.5e-06, - "ImageOrientationPatientDICOM": [ - 1, - -1e-16, - 0, - 1e-16, - 0.977416, - 0.211325 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Verio", + "InstitutionName": "CEMEREM", + "InstitutionalDepartmentName": "CEMEREM", + "InstitutionAddress": "RUE_ST_PIERRE_264_MARSEILLE...92C536..._District_FR_13006", + "DeviceSerialNumber": "40146", + "StationName": "MRC40146", + "PatientPosition": "HFS", + "ProcedureStepDescription": "TEST_VC_SPINE", + "SoftwareVersions": "syngo_MR_B17", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-MT1", + "ProtocolName": "GRE-MT1", + "ScanningSequence": "GR", + "SequenceVariant": "MTC_SP", + "ScanOptions": "MT", + "SequenceName": "_fl3d1", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "DIS2D" + ], + "SeriesNumber": 6, + "AcquisitionTime": "14:58:5.737500", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SAR": 0.514312, + "EchoTime": 0.0035, + "RepetitionTime": 0.035, + "FlipAngle": 9, + "PartialFourier": 1, + "BaseResolution": 256, + "ShimSetting": [ + -5800, + 12560, + -12058, + -175, + -411, + 2177, + 933, + 28 + ], + "TxRefAmp": 453.119, + "PhaseResolution": 1, + "ReceiveCoilName": "NeckMatrix", + "PulseSequenceDetails": "%SiemensSeq%_gre", + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 255, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "ParallelReductionFactorInPlane": 2, + "PixelBandwidth": 260, + "DwellTime": 7.5e-06, + "ImageOrientationPatientDICOM": [ + 1, + -1e-16, + 0, + 1e-16, + 0.977416, + 0.211325 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-amu05/anat/sub-amu05_flip-2_mt-off_space-other_MTS.json b/derivatives/data_preprocessed/sub-amu05/anat/sub-amu05_flip-2_mt-off_space-other_MTS.json index 4162297a8d..3f10a9e99e 100644 --- a/derivatives/data_preprocessed/sub-amu05/anat/sub-amu05_flip-2_mt-off_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-amu05/anat/sub-amu05_flip-2_mt-off_space-other_MTS.json @@ -1,61 +1,71 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Verio", - "InstitutionName": "CEMEREM", - "InstitutionalDepartmentName": "CEMEREM", - "InstitutionAddress": "RUE_ST_PIERRE_264_MARSEILLE...92C536..._District_FR_13006", - "DeviceSerialNumber": "40146", - "StationName": "MRC40146", - "PatientPosition": "HFS", - "ProcedureStepDescription": "TEST_VC_SPINE", - "SoftwareVersions": "syngo_MR_B17", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-T1w", - "ProtocolName": "GRE-T1w", - "ScanningSequence": "GR", - "SequenceVariant": "SP", - "SequenceName": "_fl3d1", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "DIS2D"], - "SeriesNumber": 8, - "AcquisitionTime": "15:02:33.490000", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SAR": 0.0333465, - "EchoTime": 0.0035, - "RepetitionTime": 0.015, - "FlipAngle": 15, - "PartialFourier": 1, - "BaseResolution": 256, - "ShimSetting": [ - -5800, - 12560, - -12058, - -175, - -411, - 2177, - 933, - 28 ], - "TxRefAmp": 453.119, - "PhaseResolution": 1, - "ReceiveCoilName": "NeckMatrix", - "PulseSequenceDetails": "%SiemensSeq%_gre", - "PercentPhaseFOV": 100, - "PhaseEncodingSteps": 255, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 256, - "ParallelReductionFactorInPlane": 2, - "PixelBandwidth": 260, - "DwellTime": 7.5e-06, - "ImageOrientationPatientDICOM": [ - 1, - -1e-16, - 0, - 1e-16, - 0.977416, - 0.211325 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Verio", + "InstitutionName": "CEMEREM", + "InstitutionalDepartmentName": "CEMEREM", + "InstitutionAddress": "RUE_ST_PIERRE_264_MARSEILLE...92C536..._District_FR_13006", + "DeviceSerialNumber": "40146", + "StationName": "MRC40146", + "PatientPosition": "HFS", + "ProcedureStepDescription": "TEST_VC_SPINE", + "SoftwareVersions": "syngo_MR_B17", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-T1w", + "ProtocolName": "GRE-T1w", + "ScanningSequence": "GR", + "SequenceVariant": "SP", + "SequenceName": "_fl3d1", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "DIS2D" + ], + "SeriesNumber": 8, + "AcquisitionTime": "15:02:33.490000", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SAR": 0.0333465, + "EchoTime": 0.0035, + "RepetitionTime": 0.015, + "FlipAngle": 15, + "PartialFourier": 1, + "BaseResolution": 256, + "ShimSetting": [ + -5800, + 12560, + -12058, + -175, + -411, + 2177, + 933, + 28 + ], + "TxRefAmp": 453.119, + "PhaseResolution": 1, + "ReceiveCoilName": "NeckMatrix", + "PulseSequenceDetails": "%SiemensSeq%_gre", + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 255, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "ParallelReductionFactorInPlane": 2, + "PixelBandwidth": 260, + "DwellTime": 7.5e-06, + "ImageOrientationPatientDICOM": [ + 1, + -1e-16, + 0, + 1e-16, + 0.977416, + 0.211325 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-amu05/anat/sub-amu05_space-other_T1w.json b/derivatives/data_preprocessed/sub-amu05/anat/sub-amu05_space-other_T1w.json index 857be339f9..0eb3b63439 100644 --- a/derivatives/data_preprocessed/sub-amu05/anat/sub-amu05_space-other_T1w.json +++ b/derivatives/data_preprocessed/sub-amu05/anat/sub-amu05_space-other_T1w.json @@ -1,63 +1,75 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Verio", - "InstitutionName": "CEMEREM", - "InstitutionalDepartmentName": "CEMEREM", - "InstitutionAddress": "RUE_ST_PIERRE_264_MARSEILLE...92C536..._District_FR_13006", - "DeviceSerialNumber": "40146", - "StationName": "MRC40146", - "PatientPosition": "HFS", - "ProcedureStepDescription": "TEST_VC_SPINE", - "SoftwareVersions": "syngo_MR_B17", - "MRAcquisitionType": "3D", - "SeriesDescription": "T1w", - "ProtocolName": "T1w", - "ScanningSequence": "GR_IR", - "SequenceVariant": "SP_MP", - "ScanOptions": "IR", - "SequenceName": "_tfl3d1", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS2D"], - "SeriesNumber": 2, - "AcquisitionTime": "14:40:38.012500", - "AcquisitionNumber": 1, - "SliceThickness": 1, - "SAR": 0.0572342, - "EchoTime": 0.00321, - "RepetitionTime": 2, - "InversionTime": 1, - "FlipAngle": 9, - "PartialFourier": 1, - "BaseResolution": 320, - "ShimSetting": [ - -5792, - 12705, - -12029, - -60, - -51, - 143, - 1033, - 174 ], - "TxRefAmp": 432.561, - "PhaseResolution": 1, - "ReceiveCoilName": "NeckMatrix", - "PulseSequenceDetails": "%SiemensSeq%_tfl", - "PercentPhaseFOV": 81.25, - "PhaseEncodingSteps": 259, - "AcquisitionMatrixPE": 260, - "ReconMatrixPE": 320, - "ParallelReductionFactorInPlane": 2, - "PixelBandwidth": 150, - "DwellTime": 1.04e-05, - "ImageOrientationPatientDICOM": [ - 0, - 1, - -0.000349045, - 0, - -0.000349045, - -1 ], - "InPlanePhaseEncodingDirectionDICOM": "ROW", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Verio", + "InstitutionName": "CEMEREM", + "InstitutionalDepartmentName": "CEMEREM", + "InstitutionAddress": "RUE_ST_PIERRE_264_MARSEILLE...92C536..._District_FR_13006", + "DeviceSerialNumber": "40146", + "StationName": "MRC40146", + "PatientPosition": "HFS", + "ProcedureStepDescription": "TEST_VC_SPINE", + "SoftwareVersions": "syngo_MR_B17", + "MRAcquisitionType": "3D", + "SeriesDescription": "T1w", + "ProtocolName": "T1w", + "ScanningSequence": "GR_IR", + "SequenceVariant": "SP_MP", + "ScanOptions": "IR", + "SequenceName": "_tfl3d1", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS2D" + ], + "SeriesNumber": 2, + "AcquisitionTime": "14:40:38.012500", + "AcquisitionNumber": 1, + "SliceThickness": 1, + "SAR": 0.0572342, + "EchoTime": 0.00321, + "RepetitionTime": 2, + "InversionTime": 1, + "FlipAngle": 9, + "PartialFourier": 1, + "BaseResolution": 320, + "ShimSetting": [ + -5792, + 12705, + -12029, + -60, + -51, + 143, + 1033, + 174 + ], + "TxRefAmp": 432.561, + "PhaseResolution": 1, + "ReceiveCoilName": "NeckMatrix", + "PulseSequenceDetails": "%SiemensSeq%_tfl", + "PercentPhaseFOV": 81.25, + "PhaseEncodingSteps": 259, + "AcquisitionMatrixPE": 260, + "ReconMatrixPE": 320, + "ParallelReductionFactorInPlane": 2, + "PixelBandwidth": 150, + "DwellTime": 1.04e-05, + "ImageOrientationPatientDICOM": [ + 0, + 1, + -0.000349045, + 0, + -0.000349045, + -1 + ], + "InPlanePhaseEncodingDirectionDICOM": "ROW", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-amu05/anat/sub-amu05_space-other_T2star.json b/derivatives/data_preprocessed/sub-amu05/anat/sub-amu05_space-other_T2star.json index 6d3725e025..44c9de2e1b 100644 --- a/derivatives/data_preprocessed/sub-amu05/anat/sub-amu05_space-other_T2star.json +++ b/derivatives/data_preprocessed/sub-amu05/anat/sub-amu05_space-other_T2star.json @@ -68,5 +68,9 @@ "InPlanePhaseEncodingDirectionDICOM": "COL", "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0", - "AcquisitionDuration": 290.0 + "AcquisitionDuration": 290.0, + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-amu05/anat/sub-amu05_space-other_T2w.json b/derivatives/data_preprocessed/sub-amu05/anat/sub-amu05_space-other_T2w.json index 3e6d218c40..aee56562e5 100644 --- a/derivatives/data_preprocessed/sub-amu05/anat/sub-amu05_space-other_T2w.json +++ b/derivatives/data_preprocessed/sub-amu05/anat/sub-amu05_space-other_T2w.json @@ -1,63 +1,75 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Verio", - "InstitutionName": "CEMEREM", - "InstitutionalDepartmentName": "CEMEREM", - "InstitutionAddress": "RUE_ST_PIERRE_264_MARSEILLE...92C536..._District_FR_13006", - "DeviceSerialNumber": "40146", - "StationName": "MRC40146", - "PatientPosition": "HFS", - "ProcedureStepDescription": "TEST_VC_SPINE", - "SoftwareVersions": "syngo_MR_B17", - "MRAcquisitionType": "3D", - "SeriesDescription": "T2w", - "ProtocolName": "T2w", - "ScanningSequence": "SE", - "SequenceVariant": "SK_SP", - "ScanOptions": "PFP", - "SequenceName": "_spcR3d1_87", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS2D"], - "SeriesNumber": 3, - "AcquisitionTime": "14:45:50.225000", - "AcquisitionNumber": 1, - "SliceThickness": 0.8, - "SAR": 0.662652, - "EchoTime": 0.12, - "RepetitionTime": 2, - "FlipAngle": 180, - "PartialFourier": 1, - "BaseResolution": 320, - "ShimSetting": [ - -5801, - 12836, - -12188, - -18, - -148, - 209, - 147, - 10 ], - "TxRefAmp": 450.169, - "PhaseResolution": 1.0125, - "ReceiveCoilName": "NeckMatrix", - "PulseSequenceDetails": "%SiemensSeq%_tse_vfl", - "PercentPhaseFOV": 100, - "EchoTrainLength": 87, - "PhaseEncodingSteps": 247, - "AcquisitionMatrixPE": 324, - "ReconMatrixPE": 320, - "ParallelReductionFactorInPlane": 2, - "PixelBandwidth": 625, - "DwellTime": 2.5e-06, - "ImageOrientationPatientDICOM": [ - 0, - 1, - -0.000349045, - 0, - -0.000349045, - -1 ], - "InPlanePhaseEncodingDirectionDICOM": "ROW", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Verio", + "InstitutionName": "CEMEREM", + "InstitutionalDepartmentName": "CEMEREM", + "InstitutionAddress": "RUE_ST_PIERRE_264_MARSEILLE...92C536..._District_FR_13006", + "DeviceSerialNumber": "40146", + "StationName": "MRC40146", + "PatientPosition": "HFS", + "ProcedureStepDescription": "TEST_VC_SPINE", + "SoftwareVersions": "syngo_MR_B17", + "MRAcquisitionType": "3D", + "SeriesDescription": "T2w", + "ProtocolName": "T2w", + "ScanningSequence": "SE", + "SequenceVariant": "SK_SP", + "ScanOptions": "PFP", + "SequenceName": "_spcR3d1_87", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS2D" + ], + "SeriesNumber": 3, + "AcquisitionTime": "14:45:50.225000", + "AcquisitionNumber": 1, + "SliceThickness": 0.8, + "SAR": 0.662652, + "EchoTime": 0.12, + "RepetitionTime": 2, + "FlipAngle": 180, + "PartialFourier": 1, + "BaseResolution": 320, + "ShimSetting": [ + -5801, + 12836, + -12188, + -18, + -148, + 209, + 147, + 10 + ], + "TxRefAmp": 450.169, + "PhaseResolution": 1.0125, + "ReceiveCoilName": "NeckMatrix", + "PulseSequenceDetails": "%SiemensSeq%_tse_vfl", + "PercentPhaseFOV": 100, + "EchoTrainLength": 87, + "PhaseEncodingSteps": 247, + "AcquisitionMatrixPE": 324, + "ReconMatrixPE": 320, + "ParallelReductionFactorInPlane": 2, + "PixelBandwidth": 625, + "DwellTime": 2.5e-06, + "ImageOrientationPatientDICOM": [ + 0, + 1, + -0.000349045, + 0, + -0.000349045, + -1 + ], + "InPlanePhaseEncodingDirectionDICOM": "ROW", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-balgrist01/anat/sub-balgrist01_flip-1_mt-on_space-other_MTS.json b/derivatives/data_preprocessed/sub-balgrist01/anat/sub-balgrist01_flip-1_mt-on_space-other_MTS.json index bf11cdc327..3402a31aea 100644 --- a/derivatives/data_preprocessed/sub-balgrist01/anat/sub-balgrist01_flip-1_mt-on_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-balgrist01/anat/sub-balgrist01_flip-1_mt-on_space-other_MTS.json @@ -1,65 +1,75 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma", - "InstitutionName": "SCMI_Balgrist_Campus", - "InstitutionalDepartmentName": "SCMI", - "InstitutionAddress": "Lengghalde_5_Zuerich_ZH_CH_8008", - "DeviceSerialNumber": "166093", - "StationName": "Prisma", - "BodyPartExamined": "CSPINE", - "PatientPosition": "HFS", - "ProcedureStepDescription": "Maryam_SC_CONS_SPINE", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-MT1", - "ProtocolName": "GRE-MT1", - "ScanningSequence": "GR", - "SequenceVariant": "MTC_SP", - "ScanOptions": "MT", - "SequenceName": "_fl3d1", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "DIS2D"], - "SeriesNumber": 6, - "AcquisitionTime": "15:53:47.972500", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SAR": 0.509342, - "EchoTime": 0.00313, - "RepetitionTime": 0.035, - "FlipAngle": 9, - "PartialFourier": 1, - "BaseResolution": 256, - "ShimSetting": [ - 2140, - -8102, - 11626, - -1380, - -176, - 2778, - -1144, - 481 ], - "TxRefAmp": 261.333, - "PhaseResolution": 1, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC5-7;NC1,2", - "PulseSequenceDetails": "%SiemensSeq%_gre", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 100, - "PhaseEncodingSteps": 255, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 256, - "ParallelReductionFactorInPlane": 2, - "PixelBandwidth": 260, - "DwellTime": 7.5e-06, - "ImageOrientationPatientDICOM": [ - 0.999999, - 0.000254229, - -0.0012086, - 2.24595e-08, - 0.978581, - 0.205862 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) (JP-LS:CharLS) MSC1900" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma", + "InstitutionName": "SCMI_Balgrist_Campus", + "InstitutionalDepartmentName": "SCMI", + "InstitutionAddress": "Lengghalde_5_Zuerich_ZH_CH_8008", + "DeviceSerialNumber": "166093", + "StationName": "Prisma", + "BodyPartExamined": "CSPINE", + "PatientPosition": "HFS", + "ProcedureStepDescription": "Maryam_SC_CONS_SPINE", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-MT1", + "ProtocolName": "GRE-MT1", + "ScanningSequence": "GR", + "SequenceVariant": "MTC_SP", + "ScanOptions": "MT", + "SequenceName": "_fl3d1", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "DIS2D" + ], + "SeriesNumber": 6, + "AcquisitionTime": "15:53:47.972500", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SAR": 0.509342, + "EchoTime": 0.00313, + "RepetitionTime": 0.035, + "FlipAngle": 9, + "PartialFourier": 1, + "BaseResolution": 256, + "ShimSetting": [ + 2140, + -8102, + 11626, + -1380, + -176, + 2778, + -1144, + 481 + ], + "TxRefAmp": 261.333, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC5-7;NC1,2", + "PulseSequenceDetails": "%SiemensSeq%_gre", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 255, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "ParallelReductionFactorInPlane": 2, + "PixelBandwidth": 260, + "DwellTime": 7.5e-06, + "ImageOrientationPatientDICOM": [ + 0.999999, + 0.000254229, + -0.0012086, + 2.24595e-08, + 0.978581, + 0.205862 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) (JP-LS:CharLS) MSC1900", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-balgrist01/anat/sub-balgrist01_flip-2_mt-off_space-other_MTS.json b/derivatives/data_preprocessed/sub-balgrist01/anat/sub-balgrist01_flip-2_mt-off_space-other_MTS.json index 2bb036034a..1ca1a8639b 100644 --- a/derivatives/data_preprocessed/sub-balgrist01/anat/sub-balgrist01_flip-2_mt-off_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-balgrist01/anat/sub-balgrist01_flip-2_mt-off_space-other_MTS.json @@ -1,64 +1,74 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma", - "InstitutionName": "SCMI_Balgrist_Campus", - "InstitutionalDepartmentName": "SCMI", - "InstitutionAddress": "Lengghalde_5_Zuerich_ZH_CH_8008", - "DeviceSerialNumber": "166093", - "StationName": "Prisma", - "BodyPartExamined": "CSPINE", - "PatientPosition": "HFS", - "ProcedureStepDescription": "Maryam_SC_CONS_SPINE", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-T1w", - "ProtocolName": "GRE-T1w", - "ScanningSequence": "GR", - "SequenceVariant": "SP", - "SequenceName": "_fl3d1", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "DIS2D"], - "SeriesNumber": 8, - "AcquisitionTime": "15:58:12.927500", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SAR": 0.0330242, - "EchoTime": 0.00313, - "RepetitionTime": 0.015, - "FlipAngle": 15, - "PartialFourier": 1, - "BaseResolution": 256, - "ShimSetting": [ - 2140, - -8102, - 11626, - -1380, - -176, - 2778, - -1144, - 481 ], - "TxRefAmp": 261.333, - "PhaseResolution": 1, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC5-7;NC1,2", - "PulseSequenceDetails": "%SiemensSeq%_gre", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 100, - "PhaseEncodingSteps": 255, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 256, - "ParallelReductionFactorInPlane": 2, - "PixelBandwidth": 260, - "DwellTime": 7.5e-06, - "ImageOrientationPatientDICOM": [ - 0.999999, - 0.000254229, - -0.0012086, - 2.24595e-08, - 0.978581, - 0.205862 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) (JP-LS:CharLS) MSC1900" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma", + "InstitutionName": "SCMI_Balgrist_Campus", + "InstitutionalDepartmentName": "SCMI", + "InstitutionAddress": "Lengghalde_5_Zuerich_ZH_CH_8008", + "DeviceSerialNumber": "166093", + "StationName": "Prisma", + "BodyPartExamined": "CSPINE", + "PatientPosition": "HFS", + "ProcedureStepDescription": "Maryam_SC_CONS_SPINE", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-T1w", + "ProtocolName": "GRE-T1w", + "ScanningSequence": "GR", + "SequenceVariant": "SP", + "SequenceName": "_fl3d1", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "DIS2D" + ], + "SeriesNumber": 8, + "AcquisitionTime": "15:58:12.927500", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SAR": 0.0330242, + "EchoTime": 0.00313, + "RepetitionTime": 0.015, + "FlipAngle": 15, + "PartialFourier": 1, + "BaseResolution": 256, + "ShimSetting": [ + 2140, + -8102, + 11626, + -1380, + -176, + 2778, + -1144, + 481 + ], + "TxRefAmp": 261.333, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC5-7;NC1,2", + "PulseSequenceDetails": "%SiemensSeq%_gre", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 255, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "ParallelReductionFactorInPlane": 2, + "PixelBandwidth": 260, + "DwellTime": 7.5e-06, + "ImageOrientationPatientDICOM": [ + 0.999999, + 0.000254229, + -0.0012086, + 2.24595e-08, + 0.978581, + 0.205862 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) (JP-LS:CharLS) MSC1900", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-balgrist01/anat/sub-balgrist01_space-other_T1w.json b/derivatives/data_preprocessed/sub-balgrist01/anat/sub-balgrist01_space-other_T1w.json index 0ea1067729..b121a0df5d 100644 --- a/derivatives/data_preprocessed/sub-balgrist01/anat/sub-balgrist01_space-other_T1w.json +++ b/derivatives/data_preprocessed/sub-balgrist01/anat/sub-balgrist01_space-other_T1w.json @@ -1,66 +1,79 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma", - "InstitutionName": "SCMI_Balgrist_Campus", - "InstitutionalDepartmentName": "SCMI", - "InstitutionAddress": "Lengghalde_5_Zuerich_ZH_CH_8008", - "DeviceSerialNumber": "166093", - "StationName": "Prisma", - "BodyPartExamined": "CSPINE", - "PatientPosition": "HFS", - "ProcedureStepDescription": "Maryam_SC_CONS_SPINE", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "T1w", - "ProtocolName": "T1w", - "ScanningSequence": "GR_IR", - "SequenceVariant": "SK_SP_MP", - "ScanOptions": "IR", - "SequenceName": "_tfl3d1_16", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS3D", "DIS2D"], - "SeriesNumber": 2, - "AcquisitionTime": "15:30:8.700000", - "AcquisitionNumber": 1, - "SliceThickness": 1, - "SAR": 0.0648959, - "EchoTime": 0.00372, - "RepetitionTime": 2, - "InversionTime": 1, - "FlipAngle": 9, - "PartialFourier": 1, - "BaseResolution": 320, - "ShimSetting": [ - 2081, - -8130, - 11594, - 58, - 61, - -8, - -4, - 28 ], - "TxRefAmp": 256.372, - "PhaseResolution": 1, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC1-7;NC1,2", - "PulseSequenceDetails": "%SiemensSeq%_tfl", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 81.25, - "PhaseEncodingSteps": 259, - "AcquisitionMatrixPE": 260, - "ReconMatrixPE": 320, - "ParallelReductionFactorInPlane": 2, - "PixelBandwidth": 150, - "DwellTime": 1.04e-05, - "ImageOrientationPatientDICOM": [ - 0, - 1, - 0, - 0.057564, - 0, - -0.998342 ], - "InPlanePhaseEncodingDirectionDICOM": "ROW", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) (JP-LS:CharLS) MSC1900" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma", + "InstitutionName": "SCMI_Balgrist_Campus", + "InstitutionalDepartmentName": "SCMI", + "InstitutionAddress": "Lengghalde_5_Zuerich_ZH_CH_8008", + "DeviceSerialNumber": "166093", + "StationName": "Prisma", + "BodyPartExamined": "CSPINE", + "PatientPosition": "HFS", + "ProcedureStepDescription": "Maryam_SC_CONS_SPINE", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "T1w", + "ProtocolName": "T1w", + "ScanningSequence": "GR_IR", + "SequenceVariant": "SK_SP_MP", + "ScanOptions": "IR", + "SequenceName": "_tfl3d1_16", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS3D", + "DIS2D" + ], + "SeriesNumber": 2, + "AcquisitionTime": "15:30:8.700000", + "AcquisitionNumber": 1, + "SliceThickness": 1, + "SAR": 0.0648959, + "EchoTime": 0.00372, + "RepetitionTime": 2, + "InversionTime": 1, + "FlipAngle": 9, + "PartialFourier": 1, + "BaseResolution": 320, + "ShimSetting": [ + 2081, + -8130, + 11594, + 58, + 61, + -8, + -4, + 28 + ], + "TxRefAmp": 256.372, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC1-7;NC1,2", + "PulseSequenceDetails": "%SiemensSeq%_tfl", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 81.25, + "PhaseEncodingSteps": 259, + "AcquisitionMatrixPE": 260, + "ReconMatrixPE": 320, + "ParallelReductionFactorInPlane": 2, + "PixelBandwidth": 150, + "DwellTime": 1.04e-05, + "ImageOrientationPatientDICOM": [ + 0, + 1, + 0, + 0.057564, + 0, + -0.998342 + ], + "InPlanePhaseEncodingDirectionDICOM": "ROW", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) (JP-LS:CharLS) MSC1900", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-balgrist01/anat/sub-balgrist01_space-other_T2star.json b/derivatives/data_preprocessed/sub-balgrist01/anat/sub-balgrist01_space-other_T2star.json index 14048b0cf7..cf3c0929d2 100644 --- a/derivatives/data_preprocessed/sub-balgrist01/anat/sub-balgrist01_space-other_T2star.json +++ b/derivatives/data_preprocessed/sub-balgrist01/anat/sub-balgrist01_space-other_T2star.json @@ -73,5 +73,9 @@ "InPlanePhaseEncodingDirectionDICOM": "COL", "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) (JP-LS:CharLS) MSC1900", - "AcquisitionDuration": 285.0 + "AcquisitionDuration": 285.0, + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-balgrist01/anat/sub-balgrist01_space-other_T2w.json b/derivatives/data_preprocessed/sub-balgrist01/anat/sub-balgrist01_space-other_T2w.json index bacbaf3fc2..56c12959b0 100644 --- a/derivatives/data_preprocessed/sub-balgrist01/anat/sub-balgrist01_space-other_T2w.json +++ b/derivatives/data_preprocessed/sub-balgrist01/anat/sub-balgrist01_space-other_T2w.json @@ -1,67 +1,80 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma", - "InstitutionName": "SCMI_Balgrist_Campus", - "InstitutionalDepartmentName": "SCMI", - "InstitutionAddress": "Lengghalde_5_Zuerich_ZH_CH_8008", - "DeviceSerialNumber": "166093", - "StationName": "Prisma", - "BodyPartExamined": "CSPINE", - "PatientPosition": "HFS", - "ProcedureStepDescription": "Maryam_SC_CONS_SPINE", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "T2w", - "ProtocolName": "T2w", - "ScanningSequence": "SE", - "SequenceVariant": "SK_SP_OSP", - "ScanOptions": "PFP", - "SequenceName": "_spcR_100", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS3D", "DIS2D"], - "SeriesNumber": 3, - "AcquisitionTime": "15:39:5.690000", - "AcquisitionNumber": 1, - "SliceThickness": 0.8, - "SAR": 0.522787, - "EchoTime": 0.12, - "RepetitionTime": 1.5, - "FlipAngle": 120, - "PartialFourier": 1, - "BaseResolution": 320, - "ShimSetting": [ - 2081, - -8130, - 11594, - 58, - 61, - -8, - -4, - 28 ], - "TxRefAmp": 264.39, - "PhaseResolution": 1, - "PhaseOversampling": 0.8, - "ReceiveCoilName": "Spine_32", - "ReceiveCoilActiveElements": "HC3-7;NC1,2;SP1", - "PulseSequenceDetails": "%SiemensSeq%_tse_vfl", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 100, - "EchoTrainLength": 76, - "PhaseEncodingSteps": 422, - "AcquisitionMatrixPE": 320, - "ReconMatrixPE": 320, - "ParallelReductionFactorInPlane": 3, - "PixelBandwidth": 625, - "DwellTime": 2.5e-06, - "ImageOrientationPatientDICOM": [ - -6.14e-13, - 1, - 4.858e-12, - 0.125333, - 4.897e-12, - -0.992115 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) (JP-LS:CharLS) MSC1900" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma", + "InstitutionName": "SCMI_Balgrist_Campus", + "InstitutionalDepartmentName": "SCMI", + "InstitutionAddress": "Lengghalde_5_Zuerich_ZH_CH_8008", + "DeviceSerialNumber": "166093", + "StationName": "Prisma", + "BodyPartExamined": "CSPINE", + "PatientPosition": "HFS", + "ProcedureStepDescription": "Maryam_SC_CONS_SPINE", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "T2w", + "ProtocolName": "T2w", + "ScanningSequence": "SE", + "SequenceVariant": "SK_SP_OSP", + "ScanOptions": "PFP", + "SequenceName": "_spcR_100", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS3D", + "DIS2D" + ], + "SeriesNumber": 3, + "AcquisitionTime": "15:39:5.690000", + "AcquisitionNumber": 1, + "SliceThickness": 0.8, + "SAR": 0.522787, + "EchoTime": 0.12, + "RepetitionTime": 1.5, + "FlipAngle": 120, + "PartialFourier": 1, + "BaseResolution": 320, + "ShimSetting": [ + 2081, + -8130, + 11594, + 58, + 61, + -8, + -4, + 28 + ], + "TxRefAmp": 264.39, + "PhaseResolution": 1, + "PhaseOversampling": 0.8, + "ReceiveCoilName": "Spine_32", + "ReceiveCoilActiveElements": "HC3-7;NC1,2;SP1", + "PulseSequenceDetails": "%SiemensSeq%_tse_vfl", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "EchoTrainLength": 76, + "PhaseEncodingSteps": 422, + "AcquisitionMatrixPE": 320, + "ReconMatrixPE": 320, + "ParallelReductionFactorInPlane": 3, + "PixelBandwidth": 625, + "DwellTime": 2.5e-06, + "ImageOrientationPatientDICOM": [ + -6.14e-13, + 1, + 4.858e-12, + 0.125333, + 4.897e-12, + -0.992115 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) (JP-LS:CharLS) MSC1900", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-balgrist02/anat/sub-balgrist02_flip-1_mt-on_space-other_MTS.json b/derivatives/data_preprocessed/sub-balgrist02/anat/sub-balgrist02_flip-1_mt-on_space-other_MTS.json index 1409c770cd..5a1e183b42 100644 --- a/derivatives/data_preprocessed/sub-balgrist02/anat/sub-balgrist02_flip-1_mt-on_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-balgrist02/anat/sub-balgrist02_flip-1_mt-on_space-other_MTS.json @@ -1,65 +1,75 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma", - "InstitutionName": "SCMI_Balgrist_Campus", - "InstitutionalDepartmentName": "SCMI", - "InstitutionAddress": "Lengghalde_5_Zuerich_ZH_CH_8008", - "DeviceSerialNumber": "166093", - "StationName": "Prisma", - "BodyPartExamined": "NECK", - "PatientPosition": "HFS", - "ProcedureStepDescription": "Maryam_SC_CONS_SPINE", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-MT1", - "ProtocolName": "GRE-MT1", - "ScanningSequence": "GR", - "SequenceVariant": "MTC_SP", - "ScanOptions": "MT", - "SequenceName": "_fl3d1", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "DIS2D"], - "SeriesNumber": 5, - "AcquisitionTime": "11:08:31.940000", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SAR": 0.547898, - "EchoTime": 0.00313, - "RepetitionTime": 0.035, - "FlipAngle": 9, - "PartialFourier": 1, - "BaseResolution": 256, - "ShimSetting": [ - 2091, - -8486, - 11745, - -357, - -250, - -510, - -682, - -191 ], - "TxRefAmp": 290.425, - "PhaseResolution": 1, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC5-7;NC1,2", - "PulseSequenceDetails": "%SiemensSeq%_gre", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 100, - "PhaseEncodingSteps": 255, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 256, - "ParallelReductionFactorInPlane": 2, - "PixelBandwidth": 260, - "DwellTime": 7.5e-06, - "ImageOrientationPatientDICOM": [ - 1, - 0, - 0, - 0, - 0.978509, - 0.206204 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) (JP-LS:CharLS) MSC1900" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma", + "InstitutionName": "SCMI_Balgrist_Campus", + "InstitutionalDepartmentName": "SCMI", + "InstitutionAddress": "Lengghalde_5_Zuerich_ZH_CH_8008", + "DeviceSerialNumber": "166093", + "StationName": "Prisma", + "BodyPartExamined": "NECK", + "PatientPosition": "HFS", + "ProcedureStepDescription": "Maryam_SC_CONS_SPINE", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-MT1", + "ProtocolName": "GRE-MT1", + "ScanningSequence": "GR", + "SequenceVariant": "MTC_SP", + "ScanOptions": "MT", + "SequenceName": "_fl3d1", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "DIS2D" + ], + "SeriesNumber": 5, + "AcquisitionTime": "11:08:31.940000", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SAR": 0.547898, + 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a/derivatives/data_preprocessed/sub-balgrist02/anat/sub-balgrist02_flip-2_mt-off_space-other_MTS.json b/derivatives/data_preprocessed/sub-balgrist02/anat/sub-balgrist02_flip-2_mt-off_space-other_MTS.json index 0d035790b5..6eb5a7115e 100644 --- a/derivatives/data_preprocessed/sub-balgrist02/anat/sub-balgrist02_flip-2_mt-off_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-balgrist02/anat/sub-balgrist02_flip-2_mt-off_space-other_MTS.json @@ -1,64 +1,74 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma", - "InstitutionName": "SCMI_Balgrist_Campus", - "InstitutionalDepartmentName": "SCMI", - "InstitutionAddress": "Lengghalde_5_Zuerich_ZH_CH_8008", - "DeviceSerialNumber": "166093", - "StationName": "Prisma", - "BodyPartExamined": "NECK", - "PatientPosition": "HFS", - "ProcedureStepDescription": "Maryam_SC_CONS_SPINE", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": 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0.206204 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) (JP-LS:CharLS) MSC1900" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma", + "InstitutionName": "SCMI_Balgrist_Campus", + "InstitutionalDepartmentName": "SCMI", + "InstitutionAddress": "Lengghalde_5_Zuerich_ZH_CH_8008", + "DeviceSerialNumber": "166093", + "StationName": "Prisma", + "BodyPartExamined": "NECK", + "PatientPosition": "HFS", + "ProcedureStepDescription": "Maryam_SC_CONS_SPINE", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-T1W", + "ProtocolName": "GRE-T1w", + "ScanningSequence": "GR", + "SequenceVariant": "SP", + "SequenceName": "_fl3d1", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "DIS2D" + ], + "SeriesNumber": 7, + "AcquisitionTime": "11:13:24.910000", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SAR": 0.035524, + "EchoTime": 0.00313, + "RepetitionTime": 0.015, + "FlipAngle": 15, + "PartialFourier": 1, + "BaseResolution": 256, + "ShimSetting": [ + 2091, + -8486, + 11745, + -357, + -250, + -510, + -682, + -191 + ], + "TxRefAmp": 290.425, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC5-7;NC1,2", + "PulseSequenceDetails": "%SiemensSeq%_gre", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 255, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "ParallelReductionFactorInPlane": 2, + "PixelBandwidth": 260, + "DwellTime": 7.5e-06, + "ImageOrientationPatientDICOM": [ + 1, + 0, + 0, + 0, + 0.978509, + 0.206204 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) (JP-LS:CharLS) MSC1900", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-balgrist02/anat/sub-balgrist02_space-other_T1w.json b/derivatives/data_preprocessed/sub-balgrist02/anat/sub-balgrist02_space-other_T1w.json index 473cab7f06..a72013075d 100644 --- a/derivatives/data_preprocessed/sub-balgrist02/anat/sub-balgrist02_space-other_T1w.json +++ b/derivatives/data_preprocessed/sub-balgrist02/anat/sub-balgrist02_space-other_T1w.json @@ -1,66 +1,79 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma", - "InstitutionName": "SCMI_Balgrist_Campus", - "InstitutionalDepartmentName": "SCMI", - "InstitutionAddress": "Lengghalde_5_Zuerich_ZH_CH_8008", - "DeviceSerialNumber": "166093", - "StationName": "Prisma", - "BodyPartExamined": "NECK", - "PatientPosition": "HFS", - "ProcedureStepDescription": "Maryam_SC_CONS_SPINE", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "T1W", - "ProtocolName": "T1w", - "ScanningSequence": "GR_IR", - "SequenceVariant": "SK_SP_MP", - "ScanOptions": "IR", - "SequenceName": "_tfl3d1_16", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS3D", "DIS2D"], - "SeriesNumber": 2, - "AcquisitionTime": "10:43:6.962500", - "AcquisitionNumber": 1, - "SliceThickness": 1, - "SAR": 0.059711, - "EchoTime": 0.00372, - "RepetitionTime": 2, - "InversionTime": 1, - "FlipAngle": 9, - "PartialFourier": 1, - "BaseResolution": 320, - "ShimSetting": [ - 2081, - -8130, - 11594, - 58, - 61, - -8, - -4, - 28 ], - "TxRefAmp": 265.12, - "PhaseResolution": 1, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC1-7;NC1,2", - "PulseSequenceDetails": "%SiemensSeq%_tfl", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 81.25, - "PhaseEncodingSteps": 259, - "AcquisitionMatrixPE": 260, - "ReconMatrixPE": 320, - "ParallelReductionFactorInPlane": 2, - "PixelBandwidth": 150, - "DwellTime": 1.04e-05, - "ImageOrientationPatientDICOM": [ - 0, - 1, - 0, - 0, - 0, - -1 ], - "InPlanePhaseEncodingDirectionDICOM": "ROW", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) (JP-LS:CharLS) MSC1900" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma", + "InstitutionName": "SCMI_Balgrist_Campus", + "InstitutionalDepartmentName": "SCMI", + "InstitutionAddress": "Lengghalde_5_Zuerich_ZH_CH_8008", + "DeviceSerialNumber": "166093", + "StationName": "Prisma", + "BodyPartExamined": "NECK", + "PatientPosition": "HFS", + "ProcedureStepDescription": "Maryam_SC_CONS_SPINE", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "T1W", + "ProtocolName": "T1w", + "ScanningSequence": "GR_IR", + "SequenceVariant": "SK_SP_MP", + "ScanOptions": "IR", + "SequenceName": "_tfl3d1_16", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS3D", + "DIS2D" + ], + "SeriesNumber": 2, + "AcquisitionTime": "10:43:6.962500", + "AcquisitionNumber": 1, + "SliceThickness": 1, + "SAR": 0.059711, + "EchoTime": 0.00372, + "RepetitionTime": 2, + "InversionTime": 1, + "FlipAngle": 9, + "PartialFourier": 1, + "BaseResolution": 320, + "ShimSetting": [ + 2081, + -8130, + 11594, + 58, + 61, + -8, + -4, + 28 + ], + "TxRefAmp": 265.12, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC1-7;NC1,2", + "PulseSequenceDetails": "%SiemensSeq%_tfl", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 81.25, + "PhaseEncodingSteps": 259, + "AcquisitionMatrixPE": 260, + "ReconMatrixPE": 320, + "ParallelReductionFactorInPlane": 2, + "PixelBandwidth": 150, + "DwellTime": 1.04e-05, + "ImageOrientationPatientDICOM": [ + 0, + 1, + 0, + 0, + 0, + -1 + ], + "InPlanePhaseEncodingDirectionDICOM": "ROW", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) (JP-LS:CharLS) MSC1900", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-balgrist02/anat/sub-balgrist02_space-other_T2star.json b/derivatives/data_preprocessed/sub-balgrist02/anat/sub-balgrist02_space-other_T2star.json index 5fd54f570e..7a3771aad9 100644 --- a/derivatives/data_preprocessed/sub-balgrist02/anat/sub-balgrist02_space-other_T2star.json +++ b/derivatives/data_preprocessed/sub-balgrist02/anat/sub-balgrist02_space-other_T2star.json @@ -73,5 +73,9 @@ "InPlanePhaseEncodingDirectionDICOM": "COL", "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) (JP-LS:CharLS) MSC1900", - "AcquisitionDuration": 285.0 + "AcquisitionDuration": 285.0, + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-balgrist02/anat/sub-balgrist02_space-other_T2w.json b/derivatives/data_preprocessed/sub-balgrist02/anat/sub-balgrist02_space-other_T2w.json index 39ac70efd3..d784705420 100644 --- a/derivatives/data_preprocessed/sub-balgrist02/anat/sub-balgrist02_space-other_T2w.json +++ b/derivatives/data_preprocessed/sub-balgrist02/anat/sub-balgrist02_space-other_T2w.json @@ -1,67 +1,80 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma", - "InstitutionName": "SCMI_Balgrist_Campus", - "InstitutionalDepartmentName": "SCMI", - "InstitutionAddress": "Lengghalde_5_Zuerich_ZH_CH_8008", - "DeviceSerialNumber": "166093", - "StationName": "Prisma", - "BodyPartExamined": "NECK", - "PatientPosition": "HFS", - "ProcedureStepDescription": "Maryam_SC_CONS_SPINE", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "T2W", - "ProtocolName": "T2w", - "ScanningSequence": "SE", - "SequenceVariant": "SK_SP_OSP", - "ScanOptions": "PFP", - "SequenceName": 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"InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) (JP-LS:CharLS) MSC1900" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma", + "InstitutionName": "SCMI_Balgrist_Campus", + "InstitutionalDepartmentName": "SCMI", + "InstitutionAddress": "Lengghalde_5_Zuerich_ZH_CH_8008", + "DeviceSerialNumber": "166093", + "StationName": "Prisma", + "BodyPartExamined": "NECK", + "PatientPosition": "HFS", + "ProcedureStepDescription": "Maryam_SC_CONS_SPINE", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "T2W", + "ProtocolName": "T2w", + "ScanningSequence": "SE", + "SequenceVariant": "SK_SP_OSP", + "ScanOptions": "PFP", + "SequenceName": "_spcR_100", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS3D", + "DIS2D" + ], + "SeriesNumber": 3, + "AcquisitionTime": "10:50:17.692500", + "AcquisitionNumber": 1, + "SliceThickness": 0.8, + "SAR": 0.657028, + "EchoTime": 0.12, + "RepetitionTime": 1.5, + "FlipAngle": 120, + "PartialFourier": 1, + "BaseResolution": 320, + "ShimSetting": [ + 2081, + -8130, + 11594, + 58, + 61, + -8, + -4, + 28 + ], + "TxRefAmp": 314.884, + "PhaseResolution": 1, + "PhaseOversampling": 0.8, + "ReceiveCoilName": "Spine_32", + "ReceiveCoilActiveElements": "HC5-7;NC1,2;SP1", + "PulseSequenceDetails": "%SiemensSeq%_tse_vfl", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "EchoTrainLength": 76, + "PhaseEncodingSteps": 422, + "AcquisitionMatrixPE": 320, + "ReconMatrixPE": 320, + "ParallelReductionFactorInPlane": 3, + "PixelBandwidth": 625, + "DwellTime": 2.5e-06, + "ImageOrientationPatientDICOM": [ + 0, + 1, + 4.897e-12, + 0, + 4.897e-12, + -1 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) (JP-LS:CharLS) MSC1900", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-balgrist03/anat/sub-balgrist03_flip-1_mt-on_space-other_MTS.json b/derivatives/data_preprocessed/sub-balgrist03/anat/sub-balgrist03_flip-1_mt-on_space-other_MTS.json index 9e6269051e..e9909639ed 100644 --- a/derivatives/data_preprocessed/sub-balgrist03/anat/sub-balgrist03_flip-1_mt-on_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-balgrist03/anat/sub-balgrist03_flip-1_mt-on_space-other_MTS.json @@ -1,65 +1,75 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma", - "InstitutionName": "SCMI_Balgrist_Campus", - "InstitutionalDepartmentName": "SCMI", - "InstitutionAddress": "Lengghalde_5_Zuerich_ZH_CH_8008", - "DeviceSerialNumber": "166093", - "StationName": "Prisma", - "BodyPartExamined": "HEADNECK", - "PatientPosition": "HFS", - "ProcedureStepDescription": "Maryam_SC_CONS_SPINE", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-MT1", - "ProtocolName": "GRE-MT1", - "ScanningSequence": "GR", - "SequenceVariant": "MTC_SP", - "ScanOptions": "MT", - "SequenceName": "_fl3d1", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "DIS2D"], - "SeriesNumber": 5, - "AcquisitionTime": "11:27:3.935000", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SAR": 0.853908, - "EchoTime": 0.00313, - "RepetitionTime": 0.039, - "FlipAngle": 9, - "PartialFourier": 1, - "BaseResolution": 256, - "ShimSetting": [ - 2019, - -8065, - 11588, - -2006, - -258, - 1220, - -544, - -28 ], - "TxRefAmp": 388.786, - "PhaseResolution": 1, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC7;NC1,2", - "PulseSequenceDetails": "%SiemensSeq%_gre", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 100, - "PhaseEncodingSteps": 255, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 256, - "ParallelReductionFactorInPlane": 2, - "PixelBandwidth": 260, - "DwellTime": 7.5e-06, - "ImageOrientationPatientDICOM": [ - 1, - 0, - 0, - 0, - 0.994522, - -0.104528 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) (JP-LS:CharLS) MSC1900" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma", + "InstitutionName": "SCMI_Balgrist_Campus", + "InstitutionalDepartmentName": "SCMI", + "InstitutionAddress": "Lengghalde_5_Zuerich_ZH_CH_8008", + "DeviceSerialNumber": "166093", + "StationName": "Prisma", + "BodyPartExamined": "HEADNECK", + "PatientPosition": "HFS", + "ProcedureStepDescription": "Maryam_SC_CONS_SPINE", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-MT1", + "ProtocolName": "GRE-MT1", + "ScanningSequence": "GR", + "SequenceVariant": "MTC_SP", + "ScanOptions": "MT", + "SequenceName": "_fl3d1", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "DIS2D" + ], + "SeriesNumber": 5, + "AcquisitionTime": "11:27:3.935000", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SAR": 0.853908, + "EchoTime": 0.00313, + "RepetitionTime": 0.039, + "FlipAngle": 9, + "PartialFourier": 1, + "BaseResolution": 256, + "ShimSetting": [ + 2019, + -8065, + 11588, + -2006, + -258, + 1220, + -544, + -28 + ], + "TxRefAmp": 388.786, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC7;NC1,2", + "PulseSequenceDetails": "%SiemensSeq%_gre", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 255, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "ParallelReductionFactorInPlane": 2, + "PixelBandwidth": 260, + "DwellTime": 7.5e-06, + "ImageOrientationPatientDICOM": [ + 1, + 0, + 0, + 0, + 0.994522, + -0.104528 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) (JP-LS:CharLS) MSC1900", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-balgrist03/anat/sub-balgrist03_flip-2_mt-off_space-other_MTS.json b/derivatives/data_preprocessed/sub-balgrist03/anat/sub-balgrist03_flip-2_mt-off_space-other_MTS.json index 622c208804..b23402a688 100644 --- a/derivatives/data_preprocessed/sub-balgrist03/anat/sub-balgrist03_flip-2_mt-off_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-balgrist03/anat/sub-balgrist03_flip-2_mt-off_space-other_MTS.json @@ -1,64 +1,74 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma", - "InstitutionName": "SCMI_Balgrist_Campus", - "InstitutionalDepartmentName": "SCMI", - "InstitutionAddress": "Lengghalde_5_Zuerich_ZH_CH_8008", - "DeviceSerialNumber": "166093", - "StationName": "Prisma", - "BodyPartExamined": "HEADNECK", - "PatientPosition": "HFS", - "ProcedureStepDescription": "Maryam_SC_CONS_SPINE", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-T1W", - "ProtocolName": "GRE-T1w", - "ScanningSequence": "GR", - "SequenceVariant": "SP", - "SequenceName": "_fl3d1", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "DIS2D"], - "SeriesNumber": 7, - "AcquisitionTime": "11:31:44.885000", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SAR": 0.0616196, - "EchoTime": 0.00313, - "RepetitionTime": 0.015, - "FlipAngle": 15, - "PartialFourier": 1, - "BaseResolution": 256, - "ShimSetting": [ - 2019, - -8065, - 11588, - -2006, - -258, - 1220, - -544, - -28 ], - "TxRefAmp": 388.786, - "PhaseResolution": 1, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC7;NC1,2", - "PulseSequenceDetails": "%SiemensSeq%_gre", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 100, - "PhaseEncodingSteps": 255, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 256, - "ParallelReductionFactorInPlane": 2, - "PixelBandwidth": 260, - "DwellTime": 7.5e-06, - "ImageOrientationPatientDICOM": [ - 1, - 0, - 0, - 0, - 0.994522, - -0.104528 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) (JP-LS:CharLS) MSC1900" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma", + "InstitutionName": "SCMI_Balgrist_Campus", + "InstitutionalDepartmentName": "SCMI", + "InstitutionAddress": "Lengghalde_5_Zuerich_ZH_CH_8008", + "DeviceSerialNumber": "166093", + "StationName": "Prisma", + "BodyPartExamined": "HEADNECK", + "PatientPosition": "HFS", + "ProcedureStepDescription": "Maryam_SC_CONS_SPINE", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-T1W", + "ProtocolName": "GRE-T1w", + "ScanningSequence": "GR", + "SequenceVariant": "SP", + "SequenceName": "_fl3d1", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "DIS2D" + ], + "SeriesNumber": 7, + "AcquisitionTime": "11:31:44.885000", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SAR": 0.0616196, + "EchoTime": 0.00313, + "RepetitionTime": 0.015, + "FlipAngle": 15, + "PartialFourier": 1, + "BaseResolution": 256, + "ShimSetting": [ + 2019, + -8065, + 11588, + -2006, + -258, + 1220, + -544, + -28 + ], + "TxRefAmp": 388.786, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC7;NC1,2", + "PulseSequenceDetails": "%SiemensSeq%_gre", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 255, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "ParallelReductionFactorInPlane": 2, + "PixelBandwidth": 260, + "DwellTime": 7.5e-06, + "ImageOrientationPatientDICOM": [ + 1, + 0, + 0, + 0, + 0.994522, + -0.104528 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) (JP-LS:CharLS) MSC1900", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-balgrist03/anat/sub-balgrist03_space-other_T1w.json b/derivatives/data_preprocessed/sub-balgrist03/anat/sub-balgrist03_space-other_T1w.json index 465fc5cae7..8256187196 100644 --- a/derivatives/data_preprocessed/sub-balgrist03/anat/sub-balgrist03_space-other_T1w.json +++ b/derivatives/data_preprocessed/sub-balgrist03/anat/sub-balgrist03_space-other_T1w.json @@ -1,66 +1,79 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma", - "InstitutionName": "SCMI_Balgrist_Campus", - "InstitutionalDepartmentName": "SCMI", - "InstitutionAddress": "Lengghalde_5_Zuerich_ZH_CH_8008", - "DeviceSerialNumber": "166093", - "StationName": "Prisma", - "BodyPartExamined": "HEADNECK", - "PatientPosition": "HFS", - "ProcedureStepDescription": "Maryam_SC_CONS_SPINE", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "T1W", - "ProtocolName": "T1w", - "ScanningSequence": "GR_IR", - "SequenceVariant": "SK_SP_MP", - "ScanOptions": "IR", - "SequenceName": "_tfl3d1_16", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS3D", "DIS2D"], - "SeriesNumber": 2, - "AcquisitionTime": "11:10:14.965000", - "AcquisitionNumber": 1, - "SliceThickness": 1, - "SAR": 0.0920099, - "EchoTime": 0.00372, - "RepetitionTime": 2, - "InversionTime": 1, - "FlipAngle": 9, - "PartialFourier": 1, - "BaseResolution": 320, - "ShimSetting": [ - 2081, - -8130, - 11594, - 58, - 61, - -8, - -4, - 28 ], - "TxRefAmp": 328.754, - "PhaseResolution": 1, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC1-7;NC1,2", - "PulseSequenceDetails": "%SiemensSeq%_tfl", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 81.25, - "PhaseEncodingSteps": 259, - "AcquisitionMatrixPE": 260, - "ReconMatrixPE": 320, - "ParallelReductionFactorInPlane": 2, - "PixelBandwidth": 150, - "DwellTime": 1.04e-05, - "ImageOrientationPatientDICOM": [ - 0, - 1, - 0, - 0, - 0, - -1 ], - "InPlanePhaseEncodingDirectionDICOM": "ROW", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) (JP-LS:CharLS) MSC1900" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma", + "InstitutionName": "SCMI_Balgrist_Campus", + "InstitutionalDepartmentName": "SCMI", + "InstitutionAddress": "Lengghalde_5_Zuerich_ZH_CH_8008", + "DeviceSerialNumber": "166093", + "StationName": "Prisma", + "BodyPartExamined": "HEADNECK", + "PatientPosition": "HFS", + "ProcedureStepDescription": "Maryam_SC_CONS_SPINE", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "T1W", + "ProtocolName": "T1w", + "ScanningSequence": "GR_IR", + "SequenceVariant": "SK_SP_MP", + "ScanOptions": "IR", + "SequenceName": "_tfl3d1_16", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS3D", + "DIS2D" + ], + "SeriesNumber": 2, + "AcquisitionTime": "11:10:14.965000", + "AcquisitionNumber": 1, + "SliceThickness": 1, + "SAR": 0.0920099, + "EchoTime": 0.00372, + "RepetitionTime": 2, + "InversionTime": 1, + "FlipAngle": 9, + "PartialFourier": 1, + "BaseResolution": 320, + "ShimSetting": [ + 2081, + -8130, + 11594, + 58, + 61, + -8, + -4, + 28 + ], + "TxRefAmp": 328.754, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC1-7;NC1,2", + "PulseSequenceDetails": "%SiemensSeq%_tfl", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 81.25, + "PhaseEncodingSteps": 259, + "AcquisitionMatrixPE": 260, + "ReconMatrixPE": 320, + "ParallelReductionFactorInPlane": 2, + "PixelBandwidth": 150, + "DwellTime": 1.04e-05, + "ImageOrientationPatientDICOM": [ + 0, + 1, + 0, + 0, + 0, + -1 + ], + "InPlanePhaseEncodingDirectionDICOM": "ROW", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) (JP-LS:CharLS) MSC1900", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-balgrist03/anat/sub-balgrist03_space-other_T2star.json b/derivatives/data_preprocessed/sub-balgrist03/anat/sub-balgrist03_space-other_T2star.json index 737d4479d6..d5e6acdf63 100644 --- a/derivatives/data_preprocessed/sub-balgrist03/anat/sub-balgrist03_space-other_T2star.json +++ b/derivatives/data_preprocessed/sub-balgrist03/anat/sub-balgrist03_space-other_T2star.json @@ -73,5 +73,9 @@ "InPlanePhaseEncodingDirectionDICOM": "COL", "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) (JP-LS:CharLS) MSC1900", - "AcquisitionDuration": 285.0 + "AcquisitionDuration": 285.0, + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-balgrist03/anat/sub-balgrist03_space-other_T2w.json b/derivatives/data_preprocessed/sub-balgrist03/anat/sub-balgrist03_space-other_T2w.json index 8c44915748..4588717ba7 100644 --- a/derivatives/data_preprocessed/sub-balgrist03/anat/sub-balgrist03_space-other_T2w.json +++ b/derivatives/data_preprocessed/sub-balgrist03/anat/sub-balgrist03_space-other_T2w.json @@ -1,67 +1,80 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma", - "InstitutionName": "SCMI_Balgrist_Campus", - "InstitutionalDepartmentName": "SCMI", - "InstitutionAddress": "Lengghalde_5_Zuerich_ZH_CH_8008", - "DeviceSerialNumber": "166093", - "StationName": "Prisma", - "BodyPartExamined": "HEADNECK", - "PatientPosition": "HFS", - "ProcedureStepDescription": "Maryam_SC_CONS_SPINE", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "T2W", - "ProtocolName": "T2w", - "ScanningSequence": "SE", - "SequenceVariant": "SK_SP_OSP", - "ScanOptions": "PFP", - "SequenceName": "_spcR_100", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS3D", "DIS2D"], - "SeriesNumber": 3, - "AcquisitionTime": "11:16:40.002500", - "AcquisitionNumber": 1, - "SliceThickness": 0.8, - "SAR": 0.866467, - "EchoTime": 0.12, - "RepetitionTime": 1.53, - "FlipAngle": 120, - "PartialFourier": 1, - "BaseResolution": 320, - "ShimSetting": [ - 2081, - -8130, - 11594, - 58, - 61, - -8, - -4, - 28 ], - "TxRefAmp": 395.756, - "PhaseResolution": 1, - "PhaseOversampling": 0.8, - "ReceiveCoilName": "Spine_32", - "ReceiveCoilActiveElements": "HC5-7;NC1,2;SP1", - "PulseSequenceDetails": "%SiemensSeq%_tse_vfl", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 100, - "EchoTrainLength": 76, - "PhaseEncodingSteps": 422, - "AcquisitionMatrixPE": 320, - "ReconMatrixPE": 320, - "ParallelReductionFactorInPlane": 3, - "PixelBandwidth": 625, - "DwellTime": 2.5e-06, - "ImageOrientationPatientDICOM": [ - 0, - 1, - 4.897e-12, - 0, - 4.897e-12, - -1 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) (JP-LS:CharLS) MSC1900" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma", + "InstitutionName": "SCMI_Balgrist_Campus", + "InstitutionalDepartmentName": "SCMI", + "InstitutionAddress": "Lengghalde_5_Zuerich_ZH_CH_8008", + "DeviceSerialNumber": "166093", + "StationName": "Prisma", + "BodyPartExamined": "HEADNECK", + "PatientPosition": "HFS", + "ProcedureStepDescription": "Maryam_SC_CONS_SPINE", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "T2W", + "ProtocolName": "T2w", + "ScanningSequence": "SE", + "SequenceVariant": "SK_SP_OSP", + "ScanOptions": "PFP", + "SequenceName": "_spcR_100", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS3D", + "DIS2D" + ], + "SeriesNumber": 3, + "AcquisitionTime": "11:16:40.002500", + "AcquisitionNumber": 1, + "SliceThickness": 0.8, + "SAR": 0.866467, + "EchoTime": 0.12, + "RepetitionTime": 1.53, + "FlipAngle": 120, + "PartialFourier": 1, + "BaseResolution": 320, + "ShimSetting": [ + 2081, + -8130, + 11594, + 58, + 61, + -8, + -4, + 28 + ], + "TxRefAmp": 395.756, + "PhaseResolution": 1, + "PhaseOversampling": 0.8, + "ReceiveCoilName": "Spine_32", + "ReceiveCoilActiveElements": "HC5-7;NC1,2;SP1", + "PulseSequenceDetails": "%SiemensSeq%_tse_vfl", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "EchoTrainLength": 76, + "PhaseEncodingSteps": 422, + "AcquisitionMatrixPE": 320, + "ReconMatrixPE": 320, + "ParallelReductionFactorInPlane": 3, + "PixelBandwidth": 625, + "DwellTime": 2.5e-06, + "ImageOrientationPatientDICOM": [ + 0, + 1, + 4.897e-12, + 0, + 4.897e-12, + -1 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) (JP-LS:CharLS) MSC1900", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-balgrist04/anat/sub-balgrist04_flip-1_mt-on_space-other_MTS.json b/derivatives/data_preprocessed/sub-balgrist04/anat/sub-balgrist04_flip-1_mt-on_space-other_MTS.json index 8c727020af..4795ecf3c5 100644 --- a/derivatives/data_preprocessed/sub-balgrist04/anat/sub-balgrist04_flip-1_mt-on_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-balgrist04/anat/sub-balgrist04_flip-1_mt-on_space-other_MTS.json @@ -1,65 +1,75 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma", - "InstitutionName": "SCMI_Balgrist_Campus", - "InstitutionalDepartmentName": "SCMI", - "InstitutionAddress": "Lengghalde_5_Zuerich_ZH_CH_8008", - "DeviceSerialNumber": "166093", - "StationName": "Prisma", - "BodyPartExamined": "HEADNECK", - "PatientPosition": "HFS", - "ProcedureStepDescription": "Maryam_SC_CONS_SPINE", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-MT1", - "ProtocolName": "GRE-MT1", - "ScanningSequence": "GR", - "SequenceVariant": "MTC_SP", - "ScanOptions": "MT", - "SequenceName": "_fl3d1", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "DIS2D"], - "SeriesNumber": 5, - "AcquisitionTime": "10:23:28.917500", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SAR": 0.592313, - "EchoTime": 0.00313, - "RepetitionTime": 0.035, - "FlipAngle": 9, - "PartialFourier": 1, - "BaseResolution": 256, - "ShimSetting": [ - 2030, - -8291, - 11619, - -1897, - 80, - 1599, - -128, - -225 ], - "TxRefAmp": 325.118, - "PhaseResolution": 1, - "ReceiveCoilName": "Spine_32", - "ReceiveCoilActiveElements": "HC7;NC1,2;SP1", - "PulseSequenceDetails": "%SiemensSeq%_gre", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 100, - "PhaseEncodingSteps": 255, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 256, - "ParallelReductionFactorInPlane": 2, - "PixelBandwidth": 260, - "DwellTime": 7.5e-06, - "ImageOrientationPatientDICOM": [ - 1, - 0, - 0, - 0, - 0.998027, - -0.0627905 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) (JP-LS:CharLS) MSC1900" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma", + "InstitutionName": "SCMI_Balgrist_Campus", + "InstitutionalDepartmentName": "SCMI", + "InstitutionAddress": "Lengghalde_5_Zuerich_ZH_CH_8008", + "DeviceSerialNumber": "166093", + "StationName": "Prisma", + "BodyPartExamined": "HEADNECK", + "PatientPosition": "HFS", + "ProcedureStepDescription": "Maryam_SC_CONS_SPINE", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-MT1", + "ProtocolName": "GRE-MT1", + "ScanningSequence": "GR", + "SequenceVariant": "MTC_SP", + "ScanOptions": "MT", + "SequenceName": "_fl3d1", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "DIS2D" + ], + "SeriesNumber": 5, + "AcquisitionTime": "10:23:28.917500", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SAR": 0.592313, + "EchoTime": 0.00313, + "RepetitionTime": 0.035, + "FlipAngle": 9, + "PartialFourier": 1, + "BaseResolution": 256, + "ShimSetting": [ + 2030, + -8291, + 11619, + -1897, + 80, + 1599, + -128, + -225 + ], + "TxRefAmp": 325.118, + "PhaseResolution": 1, + "ReceiveCoilName": "Spine_32", + "ReceiveCoilActiveElements": "HC7;NC1,2;SP1", + "PulseSequenceDetails": "%SiemensSeq%_gre", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 255, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "ParallelReductionFactorInPlane": 2, + "PixelBandwidth": 260, + "DwellTime": 7.5e-06, + "ImageOrientationPatientDICOM": [ + 1, + 0, + 0, + 0, + 0.998027, + -0.0627905 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) (JP-LS:CharLS) MSC1900", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-balgrist04/anat/sub-balgrist04_flip-2_mt-off_space-other_MTS.json b/derivatives/data_preprocessed/sub-balgrist04/anat/sub-balgrist04_flip-2_mt-off_space-other_MTS.json index 08e87a7a12..f746d327c1 100644 --- a/derivatives/data_preprocessed/sub-balgrist04/anat/sub-balgrist04_flip-2_mt-off_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-balgrist04/anat/sub-balgrist04_flip-2_mt-off_space-other_MTS.json @@ -1,64 +1,74 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma", - "InstitutionName": "SCMI_Balgrist_Campus", - "InstitutionalDepartmentName": "SCMI", - "InstitutionAddress": "Lengghalde_5_Zuerich_ZH_CH_8008", - "DeviceSerialNumber": "166093", - "StationName": "Prisma", - "BodyPartExamined": "HEADNECK", - "PatientPosition": "HFS", - "ProcedureStepDescription": "Maryam_SC_CONS_SPINE", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-T1W", - "ProtocolName": "GRE-T1w", - "ScanningSequence": "GR", - "SequenceVariant": "SP", - "SequenceName": "_fl3d1", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "DIS2D"], - "SeriesNumber": 7, - "AcquisitionTime": "10:28:8.925000", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SAR": 0.0384037, - "EchoTime": 0.00313, - "RepetitionTime": 0.015, - "FlipAngle": 15, - "PartialFourier": 1, - "BaseResolution": 256, - "ShimSetting": [ - 2030, - -8291, - 11619, - -1897, - 80, - 1599, - -128, - -225 ], - "TxRefAmp": 325.118, - "PhaseResolution": 1, - "ReceiveCoilName": "Spine_32", - "ReceiveCoilActiveElements": "HC7;NC1,2;SP1", - "PulseSequenceDetails": "%SiemensSeq%_gre", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 100, - "PhaseEncodingSteps": 255, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 256, - "ParallelReductionFactorInPlane": 2, - "PixelBandwidth": 260, - "DwellTime": 7.5e-06, - "ImageOrientationPatientDICOM": [ - 1, - 0, - 0, - 0, - 0.998027, - -0.0627905 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) (JP-LS:CharLS) MSC1900" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma", + "InstitutionName": "SCMI_Balgrist_Campus", + "InstitutionalDepartmentName": "SCMI", + "InstitutionAddress": "Lengghalde_5_Zuerich_ZH_CH_8008", + "DeviceSerialNumber": "166093", + "StationName": "Prisma", + "BodyPartExamined": "HEADNECK", + "PatientPosition": "HFS", + "ProcedureStepDescription": "Maryam_SC_CONS_SPINE", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-T1W", + "ProtocolName": "GRE-T1w", + "ScanningSequence": "GR", + "SequenceVariant": "SP", + "SequenceName": "_fl3d1", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "DIS2D" + ], + "SeriesNumber": 7, + "AcquisitionTime": "10:28:8.925000", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SAR": 0.0384037, + "EchoTime": 0.00313, + "RepetitionTime": 0.015, + "FlipAngle": 15, + "PartialFourier": 1, + "BaseResolution": 256, + "ShimSetting": [ + 2030, + -8291, + 11619, + -1897, + 80, + 1599, + -128, + -225 + ], + "TxRefAmp": 325.118, + "PhaseResolution": 1, + "ReceiveCoilName": "Spine_32", + "ReceiveCoilActiveElements": "HC7;NC1,2;SP1", + "PulseSequenceDetails": "%SiemensSeq%_gre", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 255, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "ParallelReductionFactorInPlane": 2, + "PixelBandwidth": 260, + "DwellTime": 7.5e-06, + "ImageOrientationPatientDICOM": [ + 1, + 0, + 0, + 0, + 0.998027, + -0.0627905 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) (JP-LS:CharLS) MSC1900", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-balgrist04/anat/sub-balgrist04_space-other_T1w.json b/derivatives/data_preprocessed/sub-balgrist04/anat/sub-balgrist04_space-other_T1w.json index e7b0574cff..0c2cb8bfef 100644 --- a/derivatives/data_preprocessed/sub-balgrist04/anat/sub-balgrist04_space-other_T1w.json +++ b/derivatives/data_preprocessed/sub-balgrist04/anat/sub-balgrist04_space-other_T1w.json @@ -1,66 +1,79 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma", - "InstitutionName": "SCMI_Balgrist_Campus", - "InstitutionalDepartmentName": "SCMI", - "InstitutionAddress": "Lengghalde_5_Zuerich_ZH_CH_8008", - "DeviceSerialNumber": "166093", - "StationName": "Prisma", - "BodyPartExamined": "HEADNECK", - "PatientPosition": "HFS", - "ProcedureStepDescription": "Maryam_SC_CONS_SPINE", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "T1W", - "ProtocolName": "T1w", - "ScanningSequence": "GR_IR", - "SequenceVariant": "SK_SP_MP", - "ScanOptions": "IR", - "SequenceName": "_tfl3d1_16", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS3D", "DIS2D"], - "SeriesNumber": 2, - "AcquisitionTime": "10:06:46.995000", - "AcquisitionNumber": 1, - "SliceThickness": 1, - "SAR": 0.0744503, - "EchoTime": 0.00372, - "RepetitionTime": 2, - "InversionTime": 1, - "FlipAngle": 9, - "PartialFourier": 1, - "BaseResolution": 320, - "ShimSetting": [ - 2081, - -8130, - 11594, - 58, - 61, - -8, - -4, - 28 ], - "TxRefAmp": 309.371, - "PhaseResolution": 1, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC1-7;NC1,2", - "PulseSequenceDetails": "%SiemensSeq%_tfl", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 81.25, - "PhaseEncodingSteps": 259, - "AcquisitionMatrixPE": 260, - "ReconMatrixPE": 320, - "ParallelReductionFactorInPlane": 2, - "PixelBandwidth": 150, - "DwellTime": 1.04e-05, - "ImageOrientationPatientDICOM": [ - 0, - 1, - 0, - 0, - 0, - -1 ], - "InPlanePhaseEncodingDirectionDICOM": "ROW", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) (JP-LS:CharLS) MSC1900" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma", + "InstitutionName": "SCMI_Balgrist_Campus", + "InstitutionalDepartmentName": "SCMI", + "InstitutionAddress": "Lengghalde_5_Zuerich_ZH_CH_8008", + "DeviceSerialNumber": "166093", + "StationName": "Prisma", + "BodyPartExamined": "HEADNECK", + "PatientPosition": "HFS", + "ProcedureStepDescription": "Maryam_SC_CONS_SPINE", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "T1W", + "ProtocolName": "T1w", + "ScanningSequence": "GR_IR", + "SequenceVariant": "SK_SP_MP", + "ScanOptions": "IR", + "SequenceName": "_tfl3d1_16", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS3D", + "DIS2D" + ], + "SeriesNumber": 2, + "AcquisitionTime": "10:06:46.995000", + "AcquisitionNumber": 1, + "SliceThickness": 1, + "SAR": 0.0744503, + "EchoTime": 0.00372, + "RepetitionTime": 2, + "InversionTime": 1, + "FlipAngle": 9, + "PartialFourier": 1, + "BaseResolution": 320, + "ShimSetting": [ + 2081, + -8130, + 11594, + 58, + 61, + -8, + -4, + 28 + ], + "TxRefAmp": 309.371, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC1-7;NC1,2", + "PulseSequenceDetails": "%SiemensSeq%_tfl", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 81.25, + "PhaseEncodingSteps": 259, + "AcquisitionMatrixPE": 260, + "ReconMatrixPE": 320, + "ParallelReductionFactorInPlane": 2, + "PixelBandwidth": 150, + "DwellTime": 1.04e-05, + "ImageOrientationPatientDICOM": [ + 0, + 1, + 0, + 0, + 0, + -1 + ], + "InPlanePhaseEncodingDirectionDICOM": "ROW", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) (JP-LS:CharLS) MSC1900", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-balgrist04/anat/sub-balgrist04_space-other_T2star.json b/derivatives/data_preprocessed/sub-balgrist04/anat/sub-balgrist04_space-other_T2star.json index da789f094d..cd6b2f8fbd 100644 --- a/derivatives/data_preprocessed/sub-balgrist04/anat/sub-balgrist04_space-other_T2star.json +++ b/derivatives/data_preprocessed/sub-balgrist04/anat/sub-balgrist04_space-other_T2star.json @@ -73,5 +73,9 @@ "InPlanePhaseEncodingDirectionDICOM": "COL", "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) (JP-LS:CharLS) MSC1900", - "AcquisitionDuration": 285.0 + "AcquisitionDuration": 285.0, + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-balgrist04/anat/sub-balgrist04_space-other_T2w.json b/derivatives/data_preprocessed/sub-balgrist04/anat/sub-balgrist04_space-other_T2w.json index f1cfa1c407..c5488afe4e 100644 --- a/derivatives/data_preprocessed/sub-balgrist04/anat/sub-balgrist04_space-other_T2w.json +++ b/derivatives/data_preprocessed/sub-balgrist04/anat/sub-balgrist04_space-other_T2w.json @@ -1,67 +1,80 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma", - "InstitutionName": "SCMI_Balgrist_Campus", - "InstitutionalDepartmentName": "SCMI", - "InstitutionAddress": "Lengghalde_5_Zuerich_ZH_CH_8008", - "DeviceSerialNumber": "166093", - "StationName": "Prisma", - "BodyPartExamined": "HEADNECK", - "PatientPosition": "HFS", - "ProcedureStepDescription": "Maryam_SC_CONS_SPINE", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "T2W", - "ProtocolName": "T2w", - "ScanningSequence": "SE", - "SequenceVariant": "SK_SP_OSP", - "ScanOptions": "PFP", - "SequenceName": "_spcR_100", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS3D", "DIS2D"], - "SeriesNumber": 3, - "AcquisitionTime": "10:14:54.690000", - "AcquisitionNumber": 1, - "SliceThickness": 0.8, - "SAR": 0.598866, - "EchoTime": 0.12, - "RepetitionTime": 1.5, - "FlipAngle": 120, - "PartialFourier": 1, - "BaseResolution": 320, - "ShimSetting": [ - 2081, - -8130, - 11594, - 58, - 61, - -8, - -4, - 28 ], - "TxRefAmp": 325.118, - "PhaseResolution": 1, - "PhaseOversampling": 0.8, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC5-7;NC1,2;SP1", - "PulseSequenceDetails": "%SiemensSeq%_tse_vfl", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 100, - "EchoTrainLength": 76, - "PhaseEncodingSteps": 422, - "AcquisitionMatrixPE": 320, - "ReconMatrixPE": 320, - "ParallelReductionFactorInPlane": 3, - "PixelBandwidth": 625, - "DwellTime": 2.5e-06, - "ImageOrientationPatientDICOM": [ - -1.37e-13, - 1, - 4.895e-12, - 0.0279216, - 4.897e-12, - -0.99961 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) (JP-LS:CharLS) MSC1900" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma", + "InstitutionName": "SCMI_Balgrist_Campus", + "InstitutionalDepartmentName": "SCMI", + "InstitutionAddress": "Lengghalde_5_Zuerich_ZH_CH_8008", + "DeviceSerialNumber": "166093", + "StationName": "Prisma", + "BodyPartExamined": "HEADNECK", + "PatientPosition": "HFS", + "ProcedureStepDescription": "Maryam_SC_CONS_SPINE", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "T2W", + "ProtocolName": "T2w", + "ScanningSequence": "SE", + "SequenceVariant": "SK_SP_OSP", + "ScanOptions": "PFP", + "SequenceName": "_spcR_100", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS3D", + "DIS2D" + ], + "SeriesNumber": 3, + "AcquisitionTime": "10:14:54.690000", + "AcquisitionNumber": 1, + "SliceThickness": 0.8, + "SAR": 0.598866, + "EchoTime": 0.12, + "RepetitionTime": 1.5, + "FlipAngle": 120, + "PartialFourier": 1, + "BaseResolution": 320, + "ShimSetting": [ + 2081, + -8130, + 11594, + 58, + 61, + -8, + -4, + 28 + ], + "TxRefAmp": 325.118, + "PhaseResolution": 1, + "PhaseOversampling": 0.8, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC5-7;NC1,2;SP1", + "PulseSequenceDetails": "%SiemensSeq%_tse_vfl", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "EchoTrainLength": 76, + "PhaseEncodingSteps": 422, + "AcquisitionMatrixPE": 320, + "ReconMatrixPE": 320, + "ParallelReductionFactorInPlane": 3, + "PixelBandwidth": 625, + "DwellTime": 2.5e-06, + "ImageOrientationPatientDICOM": [ + -1.37e-13, + 1, + 4.895e-12, + 0.0279216, + 4.897e-12, + -0.99961 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) (JP-LS:CharLS) MSC1900", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-balgrist05/anat/sub-balgrist05_flip-1_mt-on_space-other_MTS.json b/derivatives/data_preprocessed/sub-balgrist05/anat/sub-balgrist05_flip-1_mt-on_space-other_MTS.json index d1f8e96638..f40f438c97 100644 --- a/derivatives/data_preprocessed/sub-balgrist05/anat/sub-balgrist05_flip-1_mt-on_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-balgrist05/anat/sub-balgrist05_flip-1_mt-on_space-other_MTS.json @@ -1,65 +1,75 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma", - "InstitutionName": "SCMI_Balgrist_Campus", - "InstitutionalDepartmentName": "SCMI", - "InstitutionAddress": "Lengghalde_5_Zuerich_ZH_CH_8008", - "DeviceSerialNumber": "166093", - "StationName": "Prisma", - "BodyPartExamined": "HEADNECK", - "PatientPosition": "HFS", - "ProcedureStepDescription": "Maryam_SC_CONS_SPINE", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-MT1", - "ProtocolName": "GRE-MT1", - "ScanningSequence": "GR", - "SequenceVariant": "MTC_SP", - "ScanOptions": "MT", - "SequenceName": "_fl3d1", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "DIS2D"], - "SeriesNumber": 5, - "AcquisitionTime": "11:08:58.907500", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SAR": 0.815402, - "EchoTime": 0.00313, - "RepetitionTime": 0.035, - "FlipAngle": 9, - "PartialFourier": 1, - "BaseResolution": 256, - "ShimSetting": [ - 2028, - -8246, - 11529, - -1146, - -78, - 2433, - -256, - 92 ], - "TxRefAmp": 310.903, - "PhaseResolution": 1, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC7;NC1,2", - "PulseSequenceDetails": "%SiemensSeq%_gre", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 100, - "PhaseEncodingSteps": 255, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 256, - "ParallelReductionFactorInPlane": 2, - "PixelBandwidth": 260, - "DwellTime": 7.5e-06, - "ImageOrientationPatientDICOM": [ - 1, - 0, - 0, - 0, - 0.995562, - 0.0941083 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) (JP-LS:CharLS) MSC1900" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma", + "InstitutionName": "SCMI_Balgrist_Campus", + "InstitutionalDepartmentName": "SCMI", + "InstitutionAddress": "Lengghalde_5_Zuerich_ZH_CH_8008", + "DeviceSerialNumber": "166093", + "StationName": "Prisma", + "BodyPartExamined": "HEADNECK", + "PatientPosition": "HFS", + "ProcedureStepDescription": "Maryam_SC_CONS_SPINE", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-MT1", + "ProtocolName": "GRE-MT1", + "ScanningSequence": "GR", + "SequenceVariant": "MTC_SP", + "ScanOptions": "MT", + "SequenceName": "_fl3d1", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "DIS2D" + ], + "SeriesNumber": 5, + "AcquisitionTime": "11:08:58.907500", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SAR": 0.815402, + "EchoTime": 0.00313, + "RepetitionTime": 0.035, + "FlipAngle": 9, + "PartialFourier": 1, + "BaseResolution": 256, + "ShimSetting": [ + 2028, + -8246, + 11529, + -1146, + -78, + 2433, + -256, + 92 + ], + "TxRefAmp": 310.903, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC7;NC1,2", + "PulseSequenceDetails": "%SiemensSeq%_gre", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 255, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "ParallelReductionFactorInPlane": 2, + "PixelBandwidth": 260, + "DwellTime": 7.5e-06, + "ImageOrientationPatientDICOM": [ + 1, + 0, + 0, + 0, + 0.995562, + 0.0941083 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) (JP-LS:CharLS) MSC1900", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-balgrist05/anat/sub-balgrist05_flip-2_mt-off_space-other_MTS.json b/derivatives/data_preprocessed/sub-balgrist05/anat/sub-balgrist05_flip-2_mt-off_space-other_MTS.json index 11041c6885..3a26ffa52a 100644 --- a/derivatives/data_preprocessed/sub-balgrist05/anat/sub-balgrist05_flip-2_mt-off_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-balgrist05/anat/sub-balgrist05_flip-2_mt-off_space-other_MTS.json @@ -1,64 +1,74 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma", - "InstitutionName": "SCMI_Balgrist_Campus", - "InstitutionalDepartmentName": "SCMI", - "InstitutionAddress": "Lengghalde_5_Zuerich_ZH_CH_8008", - "DeviceSerialNumber": "166093", - "StationName": "Prisma", - "BodyPartExamined": "HEADNECK", - "PatientPosition": "HFS", - "ProcedureStepDescription": "Maryam_SC_CONS_SPINE", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-T1w", - "ProtocolName": "GRE-T1w", - "ScanningSequence": "GR", - "SequenceVariant": "SP", - "SequenceName": "_fl3d1", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "DIS2D"], - "SeriesNumber": 7, - "AcquisitionTime": "11:13:23.890000", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SAR": 0.0528682, - "EchoTime": 0.00313, - "RepetitionTime": 0.015, - "FlipAngle": 15, - "PartialFourier": 1, - "BaseResolution": 256, - "ShimSetting": [ - 2028, - -8246, - 11529, - -1146, - -78, - 2433, - -256, - 92 ], - "TxRefAmp": 310.903, - "PhaseResolution": 1, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC7;NC1,2", - "PulseSequenceDetails": "%SiemensSeq%_gre", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 100, - "PhaseEncodingSteps": 255, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 256, - "ParallelReductionFactorInPlane": 2, - "PixelBandwidth": 260, - "DwellTime": 7.5e-06, - "ImageOrientationPatientDICOM": [ - 1, - 0, - 0, - 0, - 0.995562, - 0.0941083 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) (JP-LS:CharLS) MSC1900" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma", + "InstitutionName": "SCMI_Balgrist_Campus", + "InstitutionalDepartmentName": "SCMI", + "InstitutionAddress": "Lengghalde_5_Zuerich_ZH_CH_8008", + "DeviceSerialNumber": "166093", + "StationName": "Prisma", + "BodyPartExamined": "HEADNECK", + "PatientPosition": "HFS", + "ProcedureStepDescription": "Maryam_SC_CONS_SPINE", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-T1w", + "ProtocolName": "GRE-T1w", + "ScanningSequence": "GR", + "SequenceVariant": "SP", + "SequenceName": "_fl3d1", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "DIS2D" + ], + "SeriesNumber": 7, + "AcquisitionTime": "11:13:23.890000", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SAR": 0.0528682, + "EchoTime": 0.00313, + "RepetitionTime": 0.015, + "FlipAngle": 15, + "PartialFourier": 1, + "BaseResolution": 256, + "ShimSetting": [ + 2028, + -8246, + 11529, + -1146, + -78, + 2433, + -256, + 92 + ], + "TxRefAmp": 310.903, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC7;NC1,2", + "PulseSequenceDetails": "%SiemensSeq%_gre", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 255, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "ParallelReductionFactorInPlane": 2, + "PixelBandwidth": 260, + "DwellTime": 7.5e-06, + "ImageOrientationPatientDICOM": [ + 1, + 0, + 0, + 0, + 0.995562, + 0.0941083 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) (JP-LS:CharLS) MSC1900", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-balgrist05/anat/sub-balgrist05_space-other_T1w.json b/derivatives/data_preprocessed/sub-balgrist05/anat/sub-balgrist05_space-other_T1w.json index f9f4623c56..7d9aa66f43 100644 --- a/derivatives/data_preprocessed/sub-balgrist05/anat/sub-balgrist05_space-other_T1w.json +++ b/derivatives/data_preprocessed/sub-balgrist05/anat/sub-balgrist05_space-other_T1w.json @@ -1,66 +1,79 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma", - "InstitutionName": "SCMI_Balgrist_Campus", - "InstitutionalDepartmentName": "SCMI", - "InstitutionAddress": "Lengghalde_5_Zuerich_ZH_CH_8008", - "DeviceSerialNumber": "166093", - "StationName": "Prisma", - "BodyPartExamined": "HEADNECK", - "PatientPosition": "HFS", - "ProcedureStepDescription": "Maryam_SC_CONS_SPINE", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "T1w", - "ProtocolName": "T1w", - "ScanningSequence": "GR_IR", - "SequenceVariant": "SK_SP_MP", - "ScanOptions": "IR", - "SequenceName": "_tfl3d1_16", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS3D", "DIS2D"], - "SeriesNumber": 2, - "AcquisitionTime": 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"MagneticFieldStrength": 3, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma", + "InstitutionName": "SCMI_Balgrist_Campus", + "InstitutionalDepartmentName": "SCMI", + "InstitutionAddress": "Lengghalde_5_Zuerich_ZH_CH_8008", + "DeviceSerialNumber": "166093", + "StationName": "Prisma", + "BodyPartExamined": "HEADNECK", + "PatientPosition": "HFS", + "ProcedureStepDescription": "Maryam_SC_CONS_SPINE", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "T1w", + "ProtocolName": "T1w", + "ScanningSequence": "GR_IR", + "SequenceVariant": "SK_SP_MP", + "ScanOptions": "IR", + "SequenceName": "_tfl3d1_16", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS3D", + "DIS2D" + ], + "SeriesNumber": 2, + "AcquisitionTime": "10:51:44.967500", + "AcquisitionNumber": 1, + "SliceThickness": 1, + "SAR": 0.0887768, + "EchoTime": 0.00372, + "RepetitionTime": 2, + "InversionTime": 1, + "FlipAngle": 9, + "PartialFourier": 1, + "BaseResolution": 320, + "ShimSetting": [ + 2081, + -8130, + 11594, + 58, + 61, + -8, + -4, + 28 + ], + "TxRefAmp": 282.385, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC1-7;NC1,2", + "PulseSequenceDetails": "%SiemensSeq%_tfl", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 81.25, + "PhaseEncodingSteps": 259, + "AcquisitionMatrixPE": 260, + "ReconMatrixPE": 320, + "ParallelReductionFactorInPlane": 2, + "PixelBandwidth": 150, + "DwellTime": 1.04e-05, + "ImageOrientationPatientDICOM": [ + 0, + 1, + 0, + 0, + 0, + -1 + ], + "InPlanePhaseEncodingDirectionDICOM": "ROW", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) (JP-LS:CharLS) MSC1900", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-balgrist05/anat/sub-balgrist05_space-other_T2star.json b/derivatives/data_preprocessed/sub-balgrist05/anat/sub-balgrist05_space-other_T2star.json index c2aeafe16c..6edce83fe4 100644 --- a/derivatives/data_preprocessed/sub-balgrist05/anat/sub-balgrist05_space-other_T2star.json +++ b/derivatives/data_preprocessed/sub-balgrist05/anat/sub-balgrist05_space-other_T2star.json @@ -73,5 +73,9 @@ "InPlanePhaseEncodingDirectionDICOM": "COL", "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) (JP-LS:CharLS) MSC1900", - "AcquisitionDuration": 285.0 + "AcquisitionDuration": 285.0, + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-balgrist05/anat/sub-balgrist05_space-other_T2w.json b/derivatives/data_preprocessed/sub-balgrist05/anat/sub-balgrist05_space-other_T2w.json index 792ec9f455..422d89b89b 100644 --- a/derivatives/data_preprocessed/sub-balgrist05/anat/sub-balgrist05_space-other_T2w.json +++ b/derivatives/data_preprocessed/sub-balgrist05/anat/sub-balgrist05_space-other_T2w.json @@ -1,67 +1,80 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma", - "InstitutionName": "SCMI_Balgrist_Campus", - "InstitutionalDepartmentName": "SCMI", - "InstitutionAddress": "Lengghalde_5_Zuerich_ZH_CH_8008", - "DeviceSerialNumber": "166093", - "StationName": "Prisma", - "BodyPartExamined": "HEADNECK", - "PatientPosition": "HFS", - "ProcedureStepDescription": "Maryam_SC_CONS_SPINE", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "T2w", - "ProtocolName": "T2w", - "ScanningSequence": "SE", - "SequenceVariant": "SK_SP_OSP", - "ScanOptions": "PFP", - "SequenceName": "_spcR_100", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS3D", "DIS2D"], - "SeriesNumber": 3, - "AcquisitionTime": 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(JP-LS:CharLS) MSC1900" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma", + "InstitutionName": "SCMI_Balgrist_Campus", + "InstitutionalDepartmentName": "SCMI", + "InstitutionAddress": "Lengghalde_5_Zuerich_ZH_CH_8008", + "DeviceSerialNumber": "166093", + "StationName": "Prisma", + "BodyPartExamined": "HEADNECK", + "PatientPosition": "HFS", + "ProcedureStepDescription": "Maryam_SC_CONS_SPINE", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "T2w", + "ProtocolName": "T2w", + "ScanningSequence": "SE", + "SequenceVariant": "SK_SP_OSP", + "ScanOptions": "PFP", + "SequenceName": "_spcR_100", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS3D", + "DIS2D" + ], + "SeriesNumber": 3, + "AcquisitionTime": "10:58:25.680000", + "AcquisitionNumber": 1, + "SliceThickness": 0.8, + "SAR": 0.743043, + "EchoTime": 0.12, + "RepetitionTime": 1.5, + "FlipAngle": 120, + "PartialFourier": 1, + "BaseResolution": 320, + "ShimSetting": [ + 2081, + -8130, + 11594, + 58, + 61, + -8, + -4, + 28 + ], + "TxRefAmp": 294.471, + "PhaseResolution": 1, + "PhaseOversampling": 0.8, + "ReceiveCoilName": "Spine_32", + "ReceiveCoilActiveElements": "HC5-7;NC1,2;SP1", + "PulseSequenceDetails": "%SiemensSeq%_tse_vfl", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "EchoTrainLength": 76, + "PhaseEncodingSteps": 422, + "AcquisitionMatrixPE": 320, + "ReconMatrixPE": 320, + "ParallelReductionFactorInPlane": 3, + "PixelBandwidth": 625, + "DwellTime": 2.5e-06, + "ImageOrientationPatientDICOM": [ + 0, + 1, + 4.897e-12, + 0, + 4.897e-12, + -1 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) (JP-LS:CharLS) MSC1900", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-balgrist06/anat/sub-balgrist06_flip-1_mt-on_space-other_MTS.json b/derivatives/data_preprocessed/sub-balgrist06/anat/sub-balgrist06_flip-1_mt-on_space-other_MTS.json index 5fd09e8948..ca668c8263 100644 --- a/derivatives/data_preprocessed/sub-balgrist06/anat/sub-balgrist06_flip-1_mt-on_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-balgrist06/anat/sub-balgrist06_flip-1_mt-on_space-other_MTS.json @@ -1,65 +1,75 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma", - "InstitutionName": "SCMI_Balgrist_Campus", - "InstitutionalDepartmentName": "SCMI", - "InstitutionAddress": "Lengghalde_5_Zuerich_ZH_CH_8008", - "DeviceSerialNumber": "166093", - "StationName": "Prisma", - "BodyPartExamined": "HEADNECK", - "PatientPosition": "HFS", - "ProcedureStepDescription": "Maryam_SC_CONS_SPINE", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": 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0, - 0, - 0, - 0.999048, - 0.0436194 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) (JP-LS:CharLS) MSC1900" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma", + "InstitutionName": "SCMI_Balgrist_Campus", + "InstitutionalDepartmentName": "SCMI", + "InstitutionAddress": "Lengghalde_5_Zuerich_ZH_CH_8008", + "DeviceSerialNumber": "166093", + "StationName": "Prisma", + "BodyPartExamined": "HEADNECK", + "PatientPosition": "HFS", + "ProcedureStepDescription": "Maryam_SC_CONS_SPINE", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-MT1", + "ProtocolName": "GRE-MT1", + "ScanningSequence": "GR", + "SequenceVariant": "MTC_SP", + "ScanOptions": "MT", + "SequenceName": "_fl3d1", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "DIS2D" + ], + "SeriesNumber": 5, + "AcquisitionTime": "10:44:45.912500", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SAR": 0.439766, + "EchoTime": 0.00313, + "RepetitionTime": 0.035, + "FlipAngle": 9, + "PartialFourier": 1, + "BaseResolution": 256, + "ShimSetting": [ + 2081, + -8229, + 11392, + -1743, + 113, + 2007, + -687, + 220 + ], + "TxRefAmp": 250.237, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC5-7;NC1,2", + "PulseSequenceDetails": "%SiemensSeq%_gre", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 255, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "ParallelReductionFactorInPlane": 2, + "PixelBandwidth": 260, + "DwellTime": 7.5e-06, + "ImageOrientationPatientDICOM": [ + 1, + 0, + 0, + 0, + 0.999048, + 0.0436194 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) (JP-LS:CharLS) MSC1900", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-balgrist06/anat/sub-balgrist06_flip-2_mt-off_space-other_MTS.json b/derivatives/data_preprocessed/sub-balgrist06/anat/sub-balgrist06_flip-2_mt-off_space-other_MTS.json index b062715f7d..532c558f42 100644 --- a/derivatives/data_preprocessed/sub-balgrist06/anat/sub-balgrist06_flip-2_mt-off_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-balgrist06/anat/sub-balgrist06_flip-2_mt-off_space-other_MTS.json @@ -1,64 +1,74 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma", - "InstitutionName": "SCMI_Balgrist_Campus", - "InstitutionalDepartmentName": "SCMI", - "InstitutionAddress": "Lengghalde_5_Zuerich_ZH_CH_8008", - "DeviceSerialNumber": "166093", - "StationName": "Prisma", - "BodyPartExamined": "HEADNECK", - "PatientPosition": "HFS", - "ProcedureStepDescription": "Maryam_SC_CONS_SPINE", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-T1w", - "ProtocolName": "GRE-T1w", - "ScanningSequence": "GR", - "SequenceVariant": "SP", - "SequenceName": "_fl3d1", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "DIS2D"], - "SeriesNumber": 7, - "AcquisitionTime": "10:49:11.905000", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SAR": 0.0285131, - "EchoTime": 0.00313, - "RepetitionTime": 0.015, - "FlipAngle": 15, - "PartialFourier": 1, - "BaseResolution": 256, - "ShimSetting": [ - 2081, - -8229, - 11392, - -1743, - 113, - 2007, - -687, - 220 ], - "TxRefAmp": 250.237, - "PhaseResolution": 1, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC5-7;NC1,2", - "PulseSequenceDetails": "%SiemensSeq%_gre", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 100, - "PhaseEncodingSteps": 255, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 256, - "ParallelReductionFactorInPlane": 2, - "PixelBandwidth": 260, - "DwellTime": 7.5e-06, - "ImageOrientationPatientDICOM": [ - 1, - 0, - 0, - 0, - 0.999048, - 0.0436194 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) (JP-LS:CharLS) MSC1900" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma", + "InstitutionName": "SCMI_Balgrist_Campus", + "InstitutionalDepartmentName": "SCMI", + "InstitutionAddress": "Lengghalde_5_Zuerich_ZH_CH_8008", + "DeviceSerialNumber": "166093", + "StationName": "Prisma", + "BodyPartExamined": "HEADNECK", + "PatientPosition": "HFS", + "ProcedureStepDescription": "Maryam_SC_CONS_SPINE", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-T1w", + "ProtocolName": "GRE-T1w", + "ScanningSequence": "GR", + "SequenceVariant": "SP", + "SequenceName": "_fl3d1", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "DIS2D" + ], + "SeriesNumber": 7, + "AcquisitionTime": "10:49:11.905000", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SAR": 0.0285131, + "EchoTime": 0.00313, + "RepetitionTime": 0.015, + "FlipAngle": 15, + "PartialFourier": 1, + "BaseResolution": 256, + "ShimSetting": [ + 2081, + -8229, + 11392, + -1743, + 113, + 2007, + -687, + 220 + ], + "TxRefAmp": 250.237, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC5-7;NC1,2", + "PulseSequenceDetails": "%SiemensSeq%_gre", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 255, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "ParallelReductionFactorInPlane": 2, + "PixelBandwidth": 260, + "DwellTime": 7.5e-06, + "ImageOrientationPatientDICOM": [ + 1, + 0, + 0, + 0, + 0.999048, + 0.0436194 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) (JP-LS:CharLS) MSC1900", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-balgrist06/anat/sub-balgrist06_space-other_T1w.json b/derivatives/data_preprocessed/sub-balgrist06/anat/sub-balgrist06_space-other_T1w.json index 25fd2472e6..35d360b76b 100644 --- a/derivatives/data_preprocessed/sub-balgrist06/anat/sub-balgrist06_space-other_T1w.json +++ b/derivatives/data_preprocessed/sub-balgrist06/anat/sub-balgrist06_space-other_T1w.json @@ -1,66 +1,79 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma", - "InstitutionName": "SCMI_Balgrist_Campus", - "InstitutionalDepartmentName": "SCMI", - "InstitutionAddress": "Lengghalde_5_Zuerich_ZH_CH_8008", - "DeviceSerialNumber": "166093", - "StationName": "Prisma", - "BodyPartExamined": "HEADNECK", - "PatientPosition": "HFS", - "ProcedureStepDescription": "Maryam_SC_CONS_SPINE", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "T1w", - "ProtocolName": "T1w", - "ScanningSequence": "GR_IR", - "SequenceVariant": "SK_SP_MP", - "ScanOptions": "IR", - "SequenceName": "_tfl3d1_16", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS3D", "DIS2D"], - "SeriesNumber": 2, - "AcquisitionTime": "10:28:48.700000", - "AcquisitionNumber": 1, - "SliceThickness": 1, - "SAR": 0.0431088, - "EchoTime": 0.00372, - "RepetitionTime": 2, - "InversionTime": 1, - "FlipAngle": 9, - "PartialFourier": 1, - "BaseResolution": 320, - "ShimSetting": [ - 2081, - -8130, - 11594, - 58, - 61, - -8, - -4, - 28 ], - "TxRefAmp": 220.855, - "PhaseResolution": 1, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC1-7;NC1,2", - "PulseSequenceDetails": "%SiemensSeq%_tfl", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 81.25, - "PhaseEncodingSteps": 259, - "AcquisitionMatrixPE": 260, - "ReconMatrixPE": 320, - "ParallelReductionFactorInPlane": 2, - "PixelBandwidth": 150, - "DwellTime": 1.04e-05, - "ImageOrientationPatientDICOM": [ - 0, - 1, - 0, - 0, - 0, - -1 ], - "InPlanePhaseEncodingDirectionDICOM": "ROW", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) (JP-LS:CharLS) MSC1900" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma", + "InstitutionName": "SCMI_Balgrist_Campus", + "InstitutionalDepartmentName": "SCMI", + "InstitutionAddress": "Lengghalde_5_Zuerich_ZH_CH_8008", + "DeviceSerialNumber": "166093", + "StationName": "Prisma", + "BodyPartExamined": "HEADNECK", + "PatientPosition": "HFS", + "ProcedureStepDescription": "Maryam_SC_CONS_SPINE", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "T1w", + "ProtocolName": "T1w", + "ScanningSequence": "GR_IR", + "SequenceVariant": "SK_SP_MP", + "ScanOptions": "IR", + "SequenceName": "_tfl3d1_16", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS3D", + "DIS2D" + ], + "SeriesNumber": 2, + "AcquisitionTime": "10:28:48.700000", + "AcquisitionNumber": 1, + "SliceThickness": 1, + "SAR": 0.0431088, + "EchoTime": 0.00372, + "RepetitionTime": 2, + "InversionTime": 1, + "FlipAngle": 9, + "PartialFourier": 1, + "BaseResolution": 320, + "ShimSetting": [ + 2081, + -8130, + 11594, + 58, + 61, + -8, + -4, + 28 + ], + "TxRefAmp": 220.855, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC1-7;NC1,2", + "PulseSequenceDetails": "%SiemensSeq%_tfl", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 81.25, + "PhaseEncodingSteps": 259, + "AcquisitionMatrixPE": 260, + "ReconMatrixPE": 320, + "ParallelReductionFactorInPlane": 2, + "PixelBandwidth": 150, + "DwellTime": 1.04e-05, + "ImageOrientationPatientDICOM": [ + 0, + 1, + 0, + 0, + 0, + -1 + ], + "InPlanePhaseEncodingDirectionDICOM": "ROW", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) (JP-LS:CharLS) MSC1900", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-balgrist06/anat/sub-balgrist06_space-other_T2star.json b/derivatives/data_preprocessed/sub-balgrist06/anat/sub-balgrist06_space-other_T2star.json index 183135f20a..cc509a8594 100644 --- a/derivatives/data_preprocessed/sub-balgrist06/anat/sub-balgrist06_space-other_T2star.json +++ b/derivatives/data_preprocessed/sub-balgrist06/anat/sub-balgrist06_space-other_T2star.json @@ -73,5 +73,9 @@ "InPlanePhaseEncodingDirectionDICOM": "COL", "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) (JP-LS:CharLS) MSC1900", - "AcquisitionDuration": 285.0 + "AcquisitionDuration": 285.0, + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-balgrist06/anat/sub-balgrist06_space-other_T2w.json b/derivatives/data_preprocessed/sub-balgrist06/anat/sub-balgrist06_space-other_T2w.json index d4b5eccfe8..c4a5750ad1 100644 --- a/derivatives/data_preprocessed/sub-balgrist06/anat/sub-balgrist06_space-other_T2w.json +++ b/derivatives/data_preprocessed/sub-balgrist06/anat/sub-balgrist06_space-other_T2w.json @@ -1,67 +1,80 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma", - "InstitutionName": "SCMI_Balgrist_Campus", - "InstitutionalDepartmentName": "SCMI", - "InstitutionAddress": "Lengghalde_5_Zuerich_ZH_CH_8008", - "DeviceSerialNumber": "166093", - "StationName": "Prisma", - "BodyPartExamined": "HEADNECK", - "PatientPosition": "HFS", - "ProcedureStepDescription": "Maryam_SC_CONS_SPINE", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "T2w", - "ProtocolName": "T2w", - "ScanningSequence": "SE", - "SequenceVariant": "SK_SP_OSP", - "ScanOptions": "PFP", - "SequenceName": "_spcR_100", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS3D", "DIS2D"], - "SeriesNumber": 3, - "AcquisitionTime": "10:35:33.682500", - "AcquisitionNumber": 1, - "SliceThickness": 0.8, - "SAR": 0.419058, - "EchoTime": 0.12, - "RepetitionTime": 1.5, - "FlipAngle": 120, - "PartialFourier": 1, - "BaseResolution": 320, - "ShimSetting": [ - 2081, - -8130, - 11594, - 58, - 61, - -8, - -4, - 28 ], - "TxRefAmp": 244.513, - "PhaseResolution": 1, - "PhaseOversampling": 0.8, - "ReceiveCoilName": "Spine_32", - "ReceiveCoilActiveElements": "HC5-7;NC1,2;SP1", - "PulseSequenceDetails": "%SiemensSeq%_tse_vfl", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 100, - "EchoTrainLength": 76, - "PhaseEncodingSteps": 422, - "AcquisitionMatrixPE": 320, - "ReconMatrixPE": 320, - "ParallelReductionFactorInPlane": 3, - "PixelBandwidth": 625, - "DwellTime": 2.5e-06, - "ImageOrientationPatientDICOM": [ - 0, - 1, - 4.897e-12, - 0, - 4.897e-12, - -1 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) (JP-LS:CharLS) MSC1900" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma", + "InstitutionName": "SCMI_Balgrist_Campus", + "InstitutionalDepartmentName": "SCMI", + "InstitutionAddress": "Lengghalde_5_Zuerich_ZH_CH_8008", + "DeviceSerialNumber": "166093", + "StationName": "Prisma", + "BodyPartExamined": "HEADNECK", + "PatientPosition": "HFS", + "ProcedureStepDescription": "Maryam_SC_CONS_SPINE", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "T2w", + "ProtocolName": "T2w", + "ScanningSequence": "SE", + "SequenceVariant": "SK_SP_OSP", + "ScanOptions": "PFP", + "SequenceName": "_spcR_100", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS3D", + "DIS2D" + ], + "SeriesNumber": 3, + "AcquisitionTime": "10:35:33.682500", + "AcquisitionNumber": 1, + "SliceThickness": 0.8, + "SAR": 0.419058, + "EchoTime": 0.12, + "RepetitionTime": 1.5, + "FlipAngle": 120, + "PartialFourier": 1, + "BaseResolution": 320, + "ShimSetting": [ + 2081, + -8130, + 11594, + 58, + 61, + -8, + -4, + 28 + ], + "TxRefAmp": 244.513, + "PhaseResolution": 1, + "PhaseOversampling": 0.8, + "ReceiveCoilName": "Spine_32", + "ReceiveCoilActiveElements": "HC5-7;NC1,2;SP1", + "PulseSequenceDetails": "%SiemensSeq%_tse_vfl", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "EchoTrainLength": 76, + "PhaseEncodingSteps": 422, + "AcquisitionMatrixPE": 320, + "ReconMatrixPE": 320, + "ParallelReductionFactorInPlane": 3, + "PixelBandwidth": 625, + "DwellTime": 2.5e-06, + "ImageOrientationPatientDICOM": [ + 0, + 1, + 4.897e-12, + 0, + 4.897e-12, + -1 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) (JP-LS:CharLS) MSC1900", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-barcelona01/anat/sub-barcelona01_flip-1_mt-on_space-other_MTS.json b/derivatives/data_preprocessed/sub-barcelona01/anat/sub-barcelona01_flip-1_mt-on_space-other_MTS.json index 35e12af77b..f987896adc 100644 --- a/derivatives/data_preprocessed/sub-barcelona01/anat/sub-barcelona01_flip-1_mt-on_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-barcelona01/anat/sub-barcelona01_flip-1_mt-on_space-other_MTS.json @@ -1,65 +1,75 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma_fit", - "InstitutionName": "HOSPITAL_CLINIC_BARCELONA", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "C_Villarroel_170_Barcelona_District_ES_08036", - "DeviceSerialNumber": "167044", - "StationName": "MRC35200", - "BodyPartExamined": "CSPINE", - "PatientPosition": "HFS", - "ProcedureStepDescription": "RM_CEREBRAL", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-MT1", - "ProtocolName": "GRE-MT1", - "ScanningSequence": "GR", - "SequenceVariant": "MTC_SP", - "ScanOptions": "MT", - "SequenceName": "_fl3d1", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "DIS2D"], - "SeriesNumber": 5, - "AcquisitionTime": "13:13:10.910000", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SAR": 0.576152, - "EchoTime": 0.00313, - "RepetitionTime": 0.035, - "FlipAngle": 9, - "PartialFourier": 1, - "BaseResolution": 256, - "ShimSetting": [ - 3009, - 7189, - 10352, - -1890, - 107, - 1395, - -679, - -26 ], - "TxRefAmp": 283.632, - "PhaseResolution": 1, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC5,7;NC1,2", - "PulseSequenceDetails": "%SiemensSeq%_gre", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 100, - "PhaseEncodingSteps": 255, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 256, - "ParallelReductionFactorInPlane": 2, - "PixelBandwidth": 260, - "DwellTime": 7.5e-06, - "ImageOrientationPatientDICOM": [ - 1, - 0, - 0, - 0, - 0.994338, - -0.106264 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 GCC5.3.1" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma_fit", + "InstitutionName": "HOSPITAL_CLINIC_BARCELONA", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "C_Villarroel_170_Barcelona_District_ES_08036", + "DeviceSerialNumber": "167044", + "StationName": "MRC35200", + "BodyPartExamined": "CSPINE", + "PatientPosition": "HFS", + "ProcedureStepDescription": "RM_CEREBRAL", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-MT1", + "ProtocolName": "GRE-MT1", + "ScanningSequence": "GR", + "SequenceVariant": "MTC_SP", + "ScanOptions": "MT", + "SequenceName": "_fl3d1", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "DIS2D" + ], + "SeriesNumber": 5, + "AcquisitionTime": "13:13:10.910000", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SAR": 0.576152, + "EchoTime": 0.00313, + "RepetitionTime": 0.035, + "FlipAngle": 9, + "PartialFourier": 1, + "BaseResolution": 256, + "ShimSetting": [ + 3009, + 7189, + 10352, + -1890, + 107, + 1395, + -679, + -26 + ], + "TxRefAmp": 283.632, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC5,7;NC1,2", + "PulseSequenceDetails": "%SiemensSeq%_gre", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 255, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "ParallelReductionFactorInPlane": 2, + "PixelBandwidth": 260, + "DwellTime": 7.5e-06, + "ImageOrientationPatientDICOM": [ + 1, + 0, + 0, + 0, + 0.994338, + -0.106264 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 GCC5.3.1", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-barcelona01/anat/sub-barcelona01_flip-2_mt-off_space-other_MTS.json b/derivatives/data_preprocessed/sub-barcelona01/anat/sub-barcelona01_flip-2_mt-off_space-other_MTS.json index 7fe933c7de..58b945be56 100644 --- a/derivatives/data_preprocessed/sub-barcelona01/anat/sub-barcelona01_flip-2_mt-off_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-barcelona01/anat/sub-barcelona01_flip-2_mt-off_space-other_MTS.json @@ -1,64 +1,74 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma_fit", - "InstitutionName": "HOSPITAL_CLINIC_BARCELONA", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "C_Villarroel_170_Barcelona_District_ES_08036", - "DeviceSerialNumber": "167044", - "StationName": "MRC35200", - "BodyPartExamined": "CSPINE", - "PatientPosition": "HFS", - "ProcedureStepDescription": "RM_CEREBRAL", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-T1w", - "ProtocolName": "GRE-T1w", - "ScanningSequence": "GR", - "SequenceVariant": "SP", - "SequenceName": "_fl3d1", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "DIS2D"], - "SeriesNumber": 8, - "AcquisitionTime": "13:17:36.040000", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SAR": 0.0373559, - "EchoTime": 0.00313, - "RepetitionTime": 0.015, - "FlipAngle": 15, - "PartialFourier": 1, - "BaseResolution": 256, - "ShimSetting": [ - 3009, - 7189, - 10352, - -1890, - 107, - 1395, - -679, - -26 ], - "TxRefAmp": 283.632, - "PhaseResolution": 1, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC5,7;NC1,2", - "PulseSequenceDetails": "%SiemensSeq%_gre", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 100, - "PhaseEncodingSteps": 255, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 256, - "ParallelReductionFactorInPlane": 2, - "PixelBandwidth": 260, - "DwellTime": 7.5e-06, - "ImageOrientationPatientDICOM": [ - 1, - 0, - 0, - 0, - 0.994338, - -0.106264 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 GCC5.3.1" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma_fit", + "InstitutionName": "HOSPITAL_CLINIC_BARCELONA", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "C_Villarroel_170_Barcelona_District_ES_08036", + "DeviceSerialNumber": "167044", + "StationName": "MRC35200", + "BodyPartExamined": "CSPINE", + "PatientPosition": "HFS", + "ProcedureStepDescription": "RM_CEREBRAL", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-T1w", + "ProtocolName": "GRE-T1w", + "ScanningSequence": "GR", + "SequenceVariant": "SP", + "SequenceName": "_fl3d1", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "DIS2D" + ], + "SeriesNumber": 8, + "AcquisitionTime": "13:17:36.040000", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SAR": 0.0373559, + "EchoTime": 0.00313, + "RepetitionTime": 0.015, + "FlipAngle": 15, + "PartialFourier": 1, + "BaseResolution": 256, + "ShimSetting": [ + 3009, + 7189, + 10352, + -1890, + 107, + 1395, + -679, + -26 + ], + "TxRefAmp": 283.632, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC5,7;NC1,2", + "PulseSequenceDetails": "%SiemensSeq%_gre", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 255, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "ParallelReductionFactorInPlane": 2, + "PixelBandwidth": 260, + "DwellTime": 7.5e-06, + "ImageOrientationPatientDICOM": [ + 1, + 0, + 0, + 0, + 0.994338, + -0.106264 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 GCC5.3.1", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-barcelona01/anat/sub-barcelona01_space-other_T1w.json b/derivatives/data_preprocessed/sub-barcelona01/anat/sub-barcelona01_space-other_T1w.json index e22f0b9ae0..765d7ace29 100644 --- a/derivatives/data_preprocessed/sub-barcelona01/anat/sub-barcelona01_space-other_T1w.json +++ b/derivatives/data_preprocessed/sub-barcelona01/anat/sub-barcelona01_space-other_T1w.json @@ -1,66 +1,79 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma_fit", - "InstitutionName": "HOSPITAL_CLINIC_BARCELONA", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "C_Villarroel_170_Barcelona_District_ES_08036", - "DeviceSerialNumber": "167044", - "StationName": "MRC35200", - "BodyPartExamined": "CSPINE", - "PatientPosition": "HFS", - "ProcedureStepDescription": "RM_CEREBRAL", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "T1w", - "ProtocolName": "T1w", - "ScanningSequence": "GR_IR", - "SequenceVariant": "SK_SP_MP", - "ScanOptions": "IR", - "SequenceName": "_tfl3d1_16", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS3D", "DIS2D"], - "SeriesNumber": 2, - "AcquisitionTime": "12:55:29.005000", - "AcquisitionNumber": 1, - "SliceThickness": 1, - "SAR": 0.0765441, - "EchoTime": 0.00372, - "RepetitionTime": 2, - "InversionTime": 1, - "FlipAngle": 9, - "PartialFourier": 1, - "BaseResolution": 320, - "ShimSetting": [ - 3049, - 7189, - 10396, - 54, - -10, - -27, - 18, - -11 ], - "TxRefAmp": 282.968, - "PhaseResolution": 1, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC1-7;NC1,2", - "PulseSequenceDetails": "%SiemensSeq%_tfl", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 81.25, - "PhaseEncodingSteps": 259, - "AcquisitionMatrixPE": 260, - "ReconMatrixPE": 320, - "ParallelReductionFactorInPlane": 2, - "PixelBandwidth": 150, - "DwellTime": 1.04e-05, - "ImageOrientationPatientDICOM": [ - 0, - 1, - 0, - 0, - 0, - -1 ], - "InPlanePhaseEncodingDirectionDICOM": "ROW", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 GCC5.3.1" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma_fit", + "InstitutionName": "HOSPITAL_CLINIC_BARCELONA", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "C_Villarroel_170_Barcelona_District_ES_08036", + "DeviceSerialNumber": "167044", + "StationName": "MRC35200", + "BodyPartExamined": "CSPINE", + "PatientPosition": "HFS", + "ProcedureStepDescription": "RM_CEREBRAL", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "T1w", + "ProtocolName": "T1w", + "ScanningSequence": "GR_IR", + "SequenceVariant": "SK_SP_MP", + "ScanOptions": "IR", + "SequenceName": "_tfl3d1_16", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS3D", + "DIS2D" + ], + "SeriesNumber": 2, + "AcquisitionTime": "12:55:29.005000", + "AcquisitionNumber": 1, + "SliceThickness": 1, + "SAR": 0.0765441, + "EchoTime": 0.00372, + "RepetitionTime": 2, + "InversionTime": 1, + "FlipAngle": 9, + "PartialFourier": 1, + "BaseResolution": 320, + "ShimSetting": [ + 3049, + 7189, + 10396, + 54, + -10, + -27, + 18, + -11 + ], + "TxRefAmp": 282.968, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC1-7;NC1,2", + "PulseSequenceDetails": "%SiemensSeq%_tfl", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 81.25, + "PhaseEncodingSteps": 259, + "AcquisitionMatrixPE": 260, + "ReconMatrixPE": 320, + "ParallelReductionFactorInPlane": 2, + "PixelBandwidth": 150, + "DwellTime": 1.04e-05, + "ImageOrientationPatientDICOM": [ + 0, + 1, + 0, + 0, + 0, + -1 + ], + "InPlanePhaseEncodingDirectionDICOM": "ROW", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 GCC5.3.1", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-barcelona01/anat/sub-barcelona01_space-other_T2star.json b/derivatives/data_preprocessed/sub-barcelona01/anat/sub-barcelona01_space-other_T2star.json index 0b8e2fe5f6..86b151fc96 100644 --- a/derivatives/data_preprocessed/sub-barcelona01/anat/sub-barcelona01_space-other_T2star.json +++ b/derivatives/data_preprocessed/sub-barcelona01/anat/sub-barcelona01_space-other_T2star.json @@ -72,5 +72,9 @@ "InPlanePhaseEncodingDirectionDICOM": "COL", "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20180622 GCC5.3.1", - "AcquisitionDuration": 285.0 + "AcquisitionDuration": 285.0, + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-barcelona01/anat/sub-barcelona01_space-other_T2w.json b/derivatives/data_preprocessed/sub-barcelona01/anat/sub-barcelona01_space-other_T2w.json index d2fba8d14a..42a98a7038 100644 --- a/derivatives/data_preprocessed/sub-barcelona01/anat/sub-barcelona01_space-other_T2w.json +++ b/derivatives/data_preprocessed/sub-barcelona01/anat/sub-barcelona01_space-other_T2w.json @@ -1,67 +1,80 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma_fit", - "InstitutionName": "HOSPITAL_CLINIC_BARCELONA", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "C_Villarroel_170_Barcelona_District_ES_08036", - "DeviceSerialNumber": "167044", - "StationName": "MRC35200", - "BodyPartExamined": "CSPINE", - "PatientPosition": "HFS", - "ProcedureStepDescription": "RM_CEREBRAL", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "T2w", - "ProtocolName": "T2w", - "ScanningSequence": "SE", - "SequenceVariant": "SK_SP_OSP", - "ScanOptions": "PFP", - "SequenceName": "_spcR_100", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS3D", "DIS2D"], - "SeriesNumber": 3, - "AcquisitionTime": "13:03:22.052500", - "AcquisitionNumber": 1, - "SliceThickness": 0.8, - "SAR": 0.645822, - "EchoTime": 0.12, - "RepetitionTime": 1.5, - "FlipAngle": 120, - "PartialFourier": 1, - "BaseResolution": 320, - "ShimSetting": [ - 3049, - 7189, - 10396, - 54, - -10, - -27, - 18, - -11 ], - "TxRefAmp": 298.645, - "PhaseResolution": 1, - "PhaseOversampling": 0.8, - "ReceiveCoilName": "Spine_32", - "ReceiveCoilActiveElements": "HC3-7;NC1,2;SP1", - "PulseSequenceDetails": "%SiemensSeq%_tse_vfl", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 100, - "EchoTrainLength": 76, - "PhaseEncodingSteps": 422, - "AcquisitionMatrixPE": 320, - "ReconMatrixPE": 320, - "ParallelReductionFactorInPlane": 3, - "PixelBandwidth": 625, - "DwellTime": 2.5e-06, - "ImageOrientationPatientDICOM": [ - 0, - 1, - 4.897e-12, - 0, - 4.897e-12, - -1 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 GCC5.3.1" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma_fit", + "InstitutionName": "HOSPITAL_CLINIC_BARCELONA", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "C_Villarroel_170_Barcelona_District_ES_08036", + "DeviceSerialNumber": "167044", + "StationName": "MRC35200", + "BodyPartExamined": "CSPINE", + "PatientPosition": "HFS", + "ProcedureStepDescription": "RM_CEREBRAL", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "T2w", + "ProtocolName": "T2w", + "ScanningSequence": "SE", + "SequenceVariant": "SK_SP_OSP", + "ScanOptions": "PFP", + "SequenceName": "_spcR_100", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS3D", + "DIS2D" + ], + "SeriesNumber": 3, + "AcquisitionTime": "13:03:22.052500", + "AcquisitionNumber": 1, + "SliceThickness": 0.8, + "SAR": 0.645822, + "EchoTime": 0.12, + "RepetitionTime": 1.5, + "FlipAngle": 120, + "PartialFourier": 1, + "BaseResolution": 320, + "ShimSetting": [ + 3049, + 7189, + 10396, + 54, + -10, + -27, + 18, + -11 + ], + "TxRefAmp": 298.645, + "PhaseResolution": 1, + "PhaseOversampling": 0.8, + "ReceiveCoilName": "Spine_32", + "ReceiveCoilActiveElements": "HC3-7;NC1,2;SP1", + "PulseSequenceDetails": "%SiemensSeq%_tse_vfl", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "EchoTrainLength": 76, + "PhaseEncodingSteps": 422, + "AcquisitionMatrixPE": 320, + "ReconMatrixPE": 320, + "ParallelReductionFactorInPlane": 3, + "PixelBandwidth": 625, + "DwellTime": 2.5e-06, + "ImageOrientationPatientDICOM": [ + 0, + 1, + 4.897e-12, + 0, + 4.897e-12, + -1 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 GCC5.3.1", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-barcelona02/anat/sub-barcelona02_flip-1_mt-on_space-other_MTS.json b/derivatives/data_preprocessed/sub-barcelona02/anat/sub-barcelona02_flip-1_mt-on_space-other_MTS.json index 6d8d5d37a2..13801235a9 100644 --- a/derivatives/data_preprocessed/sub-barcelona02/anat/sub-barcelona02_flip-1_mt-on_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-barcelona02/anat/sub-barcelona02_flip-1_mt-on_space-other_MTS.json @@ -1,65 +1,75 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma_fit", - "InstitutionName": "HOSPITAL_CLINIC_BARCELONA", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "C_Villarroel_170_Barcelona_District_ES_08036", - "DeviceSerialNumber": "167044", - "StationName": "MRC35200", - "BodyPartExamined": "CSPINE", - "PatientPosition": "HFS", - "ProcedureStepDescription": "RM_CEREBRAL", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-MT1", - "ProtocolName": "GRE-MT1", - "ScanningSequence": "GR", - "SequenceVariant": "MTC_SP", - "ScanOptions": "MT", - "SequenceName": "_fl3d1", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "DIS2D"], - "SeriesNumber": 5, - "AcquisitionTime": "12:25:29.920000", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SAR": 0.680848, - "EchoTime": 0.00313, - "RepetitionTime": 0.035, - "FlipAngle": 9, - "PartialFourier": 1, - "BaseResolution": 256, - "ShimSetting": [ - 3053, - 6999, - 10344, - -1028, - 79, - 1740, - -282, - -85 ], - "TxRefAmp": 345.367, - "PhaseResolution": 1, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC5-7;NC1,2", - "PulseSequenceDetails": "%SiemensSeq%_gre", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 100, - "PhaseEncodingSteps": 255, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 256, - "ParallelReductionFactorInPlane": 2, - "PixelBandwidth": 260, - "DwellTime": 7.5e-06, - "ImageOrientationPatientDICOM": [ - 1, - 0, - 0, - 0, - 0.982613, - 0.185667 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 GCC5.3.1" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma_fit", + "InstitutionName": "HOSPITAL_CLINIC_BARCELONA", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "C_Villarroel_170_Barcelona_District_ES_08036", + "DeviceSerialNumber": "167044", + "StationName": "MRC35200", + "BodyPartExamined": "CSPINE", + "PatientPosition": "HFS", + "ProcedureStepDescription": "RM_CEREBRAL", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-MT1", + "ProtocolName": "GRE-MT1", + "ScanningSequence": "GR", + "SequenceVariant": "MTC_SP", + "ScanOptions": "MT", + "SequenceName": "_fl3d1", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "DIS2D" + ], + "SeriesNumber": 5, + "AcquisitionTime": "12:25:29.920000", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SAR": 0.680848, + "EchoTime": 0.00313, + "RepetitionTime": 0.035, + "FlipAngle": 9, + "PartialFourier": 1, + "BaseResolution": 256, + "ShimSetting": [ + 3053, + 6999, + 10344, + -1028, + 79, + 1740, + -282, + -85 + ], + "TxRefAmp": 345.367, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC5-7;NC1,2", + "PulseSequenceDetails": "%SiemensSeq%_gre", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 255, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "ParallelReductionFactorInPlane": 2, + "PixelBandwidth": 260, + "DwellTime": 7.5e-06, + "ImageOrientationPatientDICOM": [ + 1, + 0, + 0, + 0, + 0.982613, + 0.185667 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 GCC5.3.1", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-barcelona02/anat/sub-barcelona02_flip-2_mt-off_space-other_MTS.json b/derivatives/data_preprocessed/sub-barcelona02/anat/sub-barcelona02_flip-2_mt-off_space-other_MTS.json index 5fc08ba552..5cfd65c5bf 100644 --- a/derivatives/data_preprocessed/sub-barcelona02/anat/sub-barcelona02_flip-2_mt-off_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-barcelona02/anat/sub-barcelona02_flip-2_mt-off_space-other_MTS.json @@ -1,64 +1,74 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma_fit", - "InstitutionName": "HOSPITAL_CLINIC_BARCELONA", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "C_Villarroel_170_Barcelona_District_ES_08036", - "DeviceSerialNumber": "167044", - "StationName": "MRC35200", - "BodyPartExamined": "CSPINE", - "PatientPosition": "HFS", - "ProcedureStepDescription": "RM_CEREBRAL", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-T1w", - "ProtocolName": "GRE-T1w", - "ScanningSequence": "GR", - "SequenceVariant": "SP", - "SequenceName": "_fl3d1", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "DIS2D"], - "SeriesNumber": 7, - "AcquisitionTime": "12:29:56.057500", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SAR": 0.0441441, - "EchoTime": 0.00313, - "RepetitionTime": 0.015, - "FlipAngle": 15, - "PartialFourier": 1, - "BaseResolution": 256, - "ShimSetting": [ - 3053, - 6999, - 10344, - -1028, - 79, - 1740, - -282, - -85 ], - "TxRefAmp": 345.367, - "PhaseResolution": 1, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC5-7;NC1,2", - "PulseSequenceDetails": "%SiemensSeq%_gre", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 100, - "PhaseEncodingSteps": 255, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 256, - "ParallelReductionFactorInPlane": 2, - "PixelBandwidth": 260, - "DwellTime": 7.5e-06, - "ImageOrientationPatientDICOM": [ - 1, - 0, - 0, - 0, - 0.982613, - 0.185667 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 GCC5.3.1" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma_fit", + "InstitutionName": "HOSPITAL_CLINIC_BARCELONA", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "C_Villarroel_170_Barcelona_District_ES_08036", + "DeviceSerialNumber": "167044", + "StationName": "MRC35200", + "BodyPartExamined": "CSPINE", + "PatientPosition": "HFS", + "ProcedureStepDescription": "RM_CEREBRAL", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-T1w", + "ProtocolName": "GRE-T1w", + "ScanningSequence": "GR", + "SequenceVariant": "SP", + "SequenceName": "_fl3d1", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "DIS2D" + ], + "SeriesNumber": 7, + "AcquisitionTime": "12:29:56.057500", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SAR": 0.0441441, + "EchoTime": 0.00313, + "RepetitionTime": 0.015, + "FlipAngle": 15, + "PartialFourier": 1, + "BaseResolution": 256, + "ShimSetting": [ + 3053, + 6999, + 10344, + -1028, + 79, + 1740, + -282, + -85 + ], + "TxRefAmp": 345.367, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC5-7;NC1,2", + "PulseSequenceDetails": "%SiemensSeq%_gre", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 255, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "ParallelReductionFactorInPlane": 2, + "PixelBandwidth": 260, + "DwellTime": 7.5e-06, + "ImageOrientationPatientDICOM": [ + 1, + 0, + 0, + 0, + 0.982613, + 0.185667 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 GCC5.3.1", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-barcelona02/anat/sub-barcelona02_space-other_T1w.json b/derivatives/data_preprocessed/sub-barcelona02/anat/sub-barcelona02_space-other_T1w.json index 6cd8d73de1..757a9a1036 100644 --- a/derivatives/data_preprocessed/sub-barcelona02/anat/sub-barcelona02_space-other_T1w.json +++ b/derivatives/data_preprocessed/sub-barcelona02/anat/sub-barcelona02_space-other_T1w.json @@ -1,66 +1,79 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma_fit", - "InstitutionName": "HOSPITAL_CLINIC_BARCELONA", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "C_Villarroel_170_Barcelona_District_ES_08036", - "DeviceSerialNumber": "167044", - "StationName": "MRC35200", - "BodyPartExamined": "CSPINE", - "PatientPosition": "HFS", - "ProcedureStepDescription": "RM_CEREBRAL", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "T1w", - "ProtocolName": "T1w", - "ScanningSequence": "GR_IR", - "SequenceVariant": "SK_SP_MP", - "ScanOptions": "IR", - "SequenceName": "_tfl3d1_16", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS3D", "DIS2D"], - "SeriesNumber": 2, - "AcquisitionTime": "12:12:36.987500", - "AcquisitionNumber": 1, - "SliceThickness": 1, - "SAR": 0.0958385, - "EchoTime": 0.00372, - "RepetitionTime": 2, - "InversionTime": 1, - "FlipAngle": 9, - "PartialFourier": 1, - "BaseResolution": 320, - "ShimSetting": [ - 3049, - 7189, - 10396, - 54, - -10, - -27, - 18, - -11 ], - "TxRefAmp": 350.869, - "PhaseResolution": 1, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC5-7;NC1,2;SP1", - "PulseSequenceDetails": "%SiemensSeq%_tfl", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 81.25, - "PhaseEncodingSteps": 259, - "AcquisitionMatrixPE": 260, - "ReconMatrixPE": 320, - "ParallelReductionFactorInPlane": 2, - "PixelBandwidth": 150, - "DwellTime": 1.04e-05, - "ImageOrientationPatientDICOM": [ - 0, - 1, - 0, - 0, - 0, - -1 ], - "InPlanePhaseEncodingDirectionDICOM": "ROW", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 GCC5.3.1" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma_fit", + "InstitutionName": "HOSPITAL_CLINIC_BARCELONA", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "C_Villarroel_170_Barcelona_District_ES_08036", + "DeviceSerialNumber": "167044", + "StationName": "MRC35200", + "BodyPartExamined": "CSPINE", + "PatientPosition": "HFS", + "ProcedureStepDescription": "RM_CEREBRAL", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "T1w", + "ProtocolName": "T1w", + "ScanningSequence": "GR_IR", + "SequenceVariant": "SK_SP_MP", + "ScanOptions": "IR", + "SequenceName": "_tfl3d1_16", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS3D", + "DIS2D" + ], + "SeriesNumber": 2, + "AcquisitionTime": "12:12:36.987500", + "AcquisitionNumber": 1, + "SliceThickness": 1, + "SAR": 0.0958385, + "EchoTime": 0.00372, + "RepetitionTime": 2, + "InversionTime": 1, + "FlipAngle": 9, + "PartialFourier": 1, + "BaseResolution": 320, + "ShimSetting": [ + 3049, + 7189, + 10396, + 54, + -10, + -27, + 18, + -11 + ], + "TxRefAmp": 350.869, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC5-7;NC1,2;SP1", + "PulseSequenceDetails": "%SiemensSeq%_tfl", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 81.25, + "PhaseEncodingSteps": 259, + "AcquisitionMatrixPE": 260, + "ReconMatrixPE": 320, + "ParallelReductionFactorInPlane": 2, + "PixelBandwidth": 150, + "DwellTime": 1.04e-05, + "ImageOrientationPatientDICOM": [ + 0, + 1, + 0, + 0, + 0, + -1 + ], + "InPlanePhaseEncodingDirectionDICOM": "ROW", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 GCC5.3.1", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-barcelona02/anat/sub-barcelona02_space-other_T2star.json b/derivatives/data_preprocessed/sub-barcelona02/anat/sub-barcelona02_space-other_T2star.json index 0e269b387d..4a8ebde425 100644 --- a/derivatives/data_preprocessed/sub-barcelona02/anat/sub-barcelona02_space-other_T2star.json +++ b/derivatives/data_preprocessed/sub-barcelona02/anat/sub-barcelona02_space-other_T2star.json @@ -72,5 +72,9 @@ "InPlanePhaseEncodingDirectionDICOM": "COL", "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20180622 GCC5.3.1", - "AcquisitionDuration": 285.0 + "AcquisitionDuration": 285.0, + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-barcelona02/anat/sub-barcelona02_space-other_T2w.json b/derivatives/data_preprocessed/sub-barcelona02/anat/sub-barcelona02_space-other_T2w.json index 0233b1029c..89c2f54825 100644 --- a/derivatives/data_preprocessed/sub-barcelona02/anat/sub-barcelona02_space-other_T2w.json +++ b/derivatives/data_preprocessed/sub-barcelona02/anat/sub-barcelona02_space-other_T2w.json @@ -1,67 +1,80 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma_fit", - "InstitutionName": "HOSPITAL_CLINIC_BARCELONA", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "C_Villarroel_170_Barcelona_District_ES_08036", - "DeviceSerialNumber": "167044", - "StationName": "MRC35200", - "BodyPartExamined": "CSPINE", - "PatientPosition": "HFS", - "ProcedureStepDescription": "RM_CEREBRAL", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "T2w", - "ProtocolName": "T2w", - "ScanningSequence": "SE", - "SequenceVariant": "SK_SP_OSP", - "ScanOptions": "PFP", - "SequenceName": "_spcR_100", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS3D", "DIS2D"], - "SeriesNumber": 3, - "AcquisitionTime": "12:17:42.092500", - "AcquisitionNumber": 1, - "SliceThickness": 0.8, - "SAR": 0.712923, - "EchoTime": 0.12, - "RepetitionTime": 1.5, - "FlipAngle": 120, - "PartialFourier": 1, - "BaseResolution": 320, - "ShimSetting": [ - 3049, - 7189, - 10396, - 54, - -10, - -27, - 18, - -11 ], - "TxRefAmp": 350.869, - "PhaseResolution": 1, - "PhaseOversampling": 0.8, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC5-7;NC1,2;SP1", - "PulseSequenceDetails": "%SiemensSeq%_tse_vfl", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 100, - "EchoTrainLength": 76, - "PhaseEncodingSteps": 422, - "AcquisitionMatrixPE": 320, - "ReconMatrixPE": 320, - "ParallelReductionFactorInPlane": 3, - "PixelBandwidth": 625, - "DwellTime": 2.5e-06, - "ImageOrientationPatientDICOM": [ - 0, - 1, - 0, - 0, - 0, - -1 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 GCC5.3.1" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma_fit", + "InstitutionName": "HOSPITAL_CLINIC_BARCELONA", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "C_Villarroel_170_Barcelona_District_ES_08036", + "DeviceSerialNumber": "167044", + "StationName": "MRC35200", + "BodyPartExamined": "CSPINE", + "PatientPosition": "HFS", + "ProcedureStepDescription": "RM_CEREBRAL", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "T2w", + "ProtocolName": "T2w", + "ScanningSequence": "SE", + "SequenceVariant": "SK_SP_OSP", + "ScanOptions": "PFP", + "SequenceName": "_spcR_100", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS3D", + "DIS2D" + ], + "SeriesNumber": 3, + "AcquisitionTime": "12:17:42.092500", + "AcquisitionNumber": 1, + "SliceThickness": 0.8, + "SAR": 0.712923, + "EchoTime": 0.12, + "RepetitionTime": 1.5, + "FlipAngle": 120, + "PartialFourier": 1, + "BaseResolution": 320, + "ShimSetting": [ + 3049, + 7189, + 10396, + 54, + -10, + -27, + 18, + -11 + ], + "TxRefAmp": 350.869, + "PhaseResolution": 1, + "PhaseOversampling": 0.8, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC5-7;NC1,2;SP1", + "PulseSequenceDetails": "%SiemensSeq%_tse_vfl", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "EchoTrainLength": 76, + "PhaseEncodingSteps": 422, + "AcquisitionMatrixPE": 320, + "ReconMatrixPE": 320, + "ParallelReductionFactorInPlane": 3, + "PixelBandwidth": 625, + "DwellTime": 2.5e-06, + "ImageOrientationPatientDICOM": [ + 0, + 1, + 0, + 0, + 0, + -1 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 GCC5.3.1", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-barcelona03/anat/sub-barcelona03_flip-1_mt-on_space-other_MTS.json b/derivatives/data_preprocessed/sub-barcelona03/anat/sub-barcelona03_flip-1_mt-on_space-other_MTS.json index 9aceaab095..5897710f5a 100644 --- a/derivatives/data_preprocessed/sub-barcelona03/anat/sub-barcelona03_flip-1_mt-on_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-barcelona03/anat/sub-barcelona03_flip-1_mt-on_space-other_MTS.json @@ -1,65 +1,75 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma_fit", - "InstitutionName": "HOSPITAL_CLINIC_BARCELONA", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "C_Villarroel_170_Barcelona_District_ES_08036", - "DeviceSerialNumber": "167044", - "StationName": "MRC35200", - "BodyPartExamined": "CSPINE", - "PatientPosition": "HFS", - "ProcedureStepDescription": "RM_CEREBRAL", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-MT1", - "ProtocolName": "GRE-MT1", - "ScanningSequence": "GR", - "SequenceVariant": "MTC_SP", - "ScanOptions": "MT", - "SequenceName": "_fl3d1", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "DIS2D"], - "SeriesNumber": 5, - "AcquisitionTime": "13:01:57.922500", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SAR": 0.576447, - "EchoTime": 0.00313, - "RepetitionTime": 0.035, - "FlipAngle": 9, - "PartialFourier": 1, - "BaseResolution": 256, - "ShimSetting": [ - 3004, - 7112, - 10377, - -1630, - -212, - 1950, - -503, - -31 ], - "TxRefAmp": 310.754, - "PhaseResolution": 1, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC7;NC1,2", - "PulseSequenceDetails": "%SiemensSeq%_gre", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 100, - "PhaseEncodingSteps": 255, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 256, - "ParallelReductionFactorInPlane": 2, - "PixelBandwidth": 260, - "DwellTime": 7.5e-06, - "ImageOrientationPatientDICOM": [ - 1, - 0, - 0, - 0, - 0.997564, - 0.0697565 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 GCC5.3.1" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma_fit", + "InstitutionName": "HOSPITAL_CLINIC_BARCELONA", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "C_Villarroel_170_Barcelona_District_ES_08036", + "DeviceSerialNumber": "167044", + "StationName": "MRC35200", + "BodyPartExamined": "CSPINE", + "PatientPosition": "HFS", + "ProcedureStepDescription": "RM_CEREBRAL", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-MT1", + "ProtocolName": "GRE-MT1", + "ScanningSequence": "GR", + "SequenceVariant": "MTC_SP", + "ScanOptions": "MT", + "SequenceName": "_fl3d1", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "DIS2D" + ], + "SeriesNumber": 5, + "AcquisitionTime": "13:01:57.922500", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SAR": 0.576447, + "EchoTime": 0.00313, + "RepetitionTime": 0.035, + "FlipAngle": 9, + "PartialFourier": 1, + "BaseResolution": 256, + "ShimSetting": [ + 3004, + 7112, + 10377, + -1630, + -212, + 1950, + -503, + -31 + ], + "TxRefAmp": 310.754, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC7;NC1,2", + "PulseSequenceDetails": "%SiemensSeq%_gre", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 255, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "ParallelReductionFactorInPlane": 2, + "PixelBandwidth": 260, + "DwellTime": 7.5e-06, + "ImageOrientationPatientDICOM": [ + 1, + 0, + 0, + 0, + 0.997564, + 0.0697565 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 GCC5.3.1", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-barcelona03/anat/sub-barcelona03_flip-2_mt-off_space-other_MTS.json b/derivatives/data_preprocessed/sub-barcelona03/anat/sub-barcelona03_flip-2_mt-off_space-other_MTS.json index 372c7ea3ad..2ef6563bda 100644 --- a/derivatives/data_preprocessed/sub-barcelona03/anat/sub-barcelona03_flip-2_mt-off_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-barcelona03/anat/sub-barcelona03_flip-2_mt-off_space-other_MTS.json @@ -1,64 +1,74 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma_fit", - "InstitutionName": "HOSPITAL_CLINIC_BARCELONA", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "C_Villarroel_170_Barcelona_District_ES_08036", - "DeviceSerialNumber": "167044", - "StationName": "MRC35200", - "BodyPartExamined": "CSPINE", - "PatientPosition": "HFS", - "ProcedureStepDescription": "RM_CEREBRAL", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-T1w", - "ProtocolName": "GRE-T1w", - "ScanningSequence": "GR", - "SequenceVariant": "SP", - "SequenceName": "_fl3d1", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "DIS2D"], - "SeriesNumber": 7, - "AcquisitionTime": "13:06:22.995000", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SAR": 0.0373751, - "EchoTime": 0.00313, - "RepetitionTime": 0.015, - "FlipAngle": 15, - "PartialFourier": 1, - "BaseResolution": 256, - "ShimSetting": [ - 3004, - 7112, - 10377, - -1630, - -212, - 1950, - -503, - -31 ], - "TxRefAmp": 310.754, - "PhaseResolution": 1, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC7;NC1,2", - "PulseSequenceDetails": "%SiemensSeq%_gre", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 100, - "PhaseEncodingSteps": 255, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 256, - "ParallelReductionFactorInPlane": 2, - "PixelBandwidth": 260, - "DwellTime": 7.5e-06, - "ImageOrientationPatientDICOM": [ - 1, - 0, - 0, - 0, - 0.997564, - 0.0697565 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 GCC5.3.1" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma_fit", + "InstitutionName": "HOSPITAL_CLINIC_BARCELONA", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "C_Villarroel_170_Barcelona_District_ES_08036", + "DeviceSerialNumber": "167044", + "StationName": "MRC35200", + "BodyPartExamined": "CSPINE", + "PatientPosition": "HFS", + "ProcedureStepDescription": "RM_CEREBRAL", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-T1w", + "ProtocolName": "GRE-T1w", + "ScanningSequence": "GR", + "SequenceVariant": "SP", + "SequenceName": "_fl3d1", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "DIS2D" + ], + "SeriesNumber": 7, + "AcquisitionTime": "13:06:22.995000", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SAR": 0.0373751, + "EchoTime": 0.00313, + "RepetitionTime": 0.015, + "FlipAngle": 15, + "PartialFourier": 1, + "BaseResolution": 256, + "ShimSetting": [ + 3004, + 7112, + 10377, + -1630, + -212, + 1950, + -503, + -31 + ], + "TxRefAmp": 310.754, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC7;NC1,2", + "PulseSequenceDetails": "%SiemensSeq%_gre", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 255, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "ParallelReductionFactorInPlane": 2, + "PixelBandwidth": 260, + "DwellTime": 7.5e-06, + "ImageOrientationPatientDICOM": [ + 1, + 0, + 0, + 0, + 0.997564, + 0.0697565 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 GCC5.3.1", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-barcelona03/anat/sub-barcelona03_space-other_T1w.json b/derivatives/data_preprocessed/sub-barcelona03/anat/sub-barcelona03_space-other_T1w.json index a55db650cd..80609a9a17 100644 --- a/derivatives/data_preprocessed/sub-barcelona03/anat/sub-barcelona03_space-other_T1w.json +++ b/derivatives/data_preprocessed/sub-barcelona03/anat/sub-barcelona03_space-other_T1w.json @@ -1,66 +1,79 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma_fit", - "InstitutionName": "HOSPITAL_CLINIC_BARCELONA", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "C_Villarroel_170_Barcelona_District_ES_08036", - "DeviceSerialNumber": "167044", - "StationName": "MRC35200", - "BodyPartExamined": "CSPINE", - "PatientPosition": "HFS", - "ProcedureStepDescription": "RM_CEREBRAL", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "T1w", - "ProtocolName": "T1w", - "ScanningSequence": "GR_IR", - "SequenceVariant": "SK_SP_MP", - "ScanOptions": "IR", - "SequenceName": "_tfl3d1_16", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS3D", "DIS2D"], - "SeriesNumber": 2, - "AcquisitionTime": "12:48:17.022500", - "AcquisitionNumber": 1, - "SliceThickness": 1, - "SAR": 0.0797027, - "EchoTime": 0.00372, - "RepetitionTime": 2, - "InversionTime": 1, - "FlipAngle": 9, - "PartialFourier": 1, - "BaseResolution": 320, - "ShimSetting": [ - 3049, - 7189, - 10396, - 54, - -10, - -27, - 18, - -11 ], - "TxRefAmp": 310.104, - "PhaseResolution": 1, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC5-7;NC1,2;SP1", - "PulseSequenceDetails": "%SiemensSeq%_tfl", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 81.25, - "PhaseEncodingSteps": 259, - "AcquisitionMatrixPE": 260, - "ReconMatrixPE": 320, - "ParallelReductionFactorInPlane": 2, - "PixelBandwidth": 150, - "DwellTime": 1.04e-05, - "ImageOrientationPatientDICOM": [ - 0, - 1, - 0, - 0, - 0, - -1 ], - "InPlanePhaseEncodingDirectionDICOM": "ROW", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 GCC5.3.1" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma_fit", + "InstitutionName": "HOSPITAL_CLINIC_BARCELONA", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "C_Villarroel_170_Barcelona_District_ES_08036", + "DeviceSerialNumber": "167044", + "StationName": "MRC35200", + "BodyPartExamined": "CSPINE", + "PatientPosition": "HFS", + "ProcedureStepDescription": "RM_CEREBRAL", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "T1w", + "ProtocolName": "T1w", + "ScanningSequence": "GR_IR", + "SequenceVariant": "SK_SP_MP", + "ScanOptions": "IR", + "SequenceName": "_tfl3d1_16", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS3D", + "DIS2D" + ], + "SeriesNumber": 2, + "AcquisitionTime": "12:48:17.022500", + "AcquisitionNumber": 1, + "SliceThickness": 1, + "SAR": 0.0797027, + "EchoTime": 0.00372, + "RepetitionTime": 2, + "InversionTime": 1, + "FlipAngle": 9, + "PartialFourier": 1, + "BaseResolution": 320, + "ShimSetting": [ + 3049, + 7189, + 10396, + 54, + -10, + -27, + 18, + -11 + ], + "TxRefAmp": 310.104, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC5-7;NC1,2;SP1", + "PulseSequenceDetails": "%SiemensSeq%_tfl", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 81.25, + "PhaseEncodingSteps": 259, + "AcquisitionMatrixPE": 260, + "ReconMatrixPE": 320, + "ParallelReductionFactorInPlane": 2, + "PixelBandwidth": 150, + "DwellTime": 1.04e-05, + "ImageOrientationPatientDICOM": [ + 0, + 1, + 0, + 0, + 0, + -1 + ], + "InPlanePhaseEncodingDirectionDICOM": "ROW", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 GCC5.3.1", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-barcelona03/anat/sub-barcelona03_space-other_T2star.json b/derivatives/data_preprocessed/sub-barcelona03/anat/sub-barcelona03_space-other_T2star.json index a8b6380fd3..727da0ac9c 100644 --- a/derivatives/data_preprocessed/sub-barcelona03/anat/sub-barcelona03_space-other_T2star.json +++ b/derivatives/data_preprocessed/sub-barcelona03/anat/sub-barcelona03_space-other_T2star.json @@ -72,5 +72,9 @@ "InPlanePhaseEncodingDirectionDICOM": "COL", "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20180622 GCC5.3.1", - "AcquisitionDuration": 285.0 + "AcquisitionDuration": 285.0, + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-barcelona03/anat/sub-barcelona03_space-other_T2w.json b/derivatives/data_preprocessed/sub-barcelona03/anat/sub-barcelona03_space-other_T2w.json index 4ff5b36e0b..be80d3cdf5 100644 --- a/derivatives/data_preprocessed/sub-barcelona03/anat/sub-barcelona03_space-other_T2w.json +++ b/derivatives/data_preprocessed/sub-barcelona03/anat/sub-barcelona03_space-other_T2w.json @@ -1,67 +1,80 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma_fit", - "InstitutionName": "HOSPITAL_CLINIC_BARCELONA", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "C_Villarroel_170_Barcelona_District_ES_08036", - "DeviceSerialNumber": "167044", - "StationName": "MRC35200", - "BodyPartExamined": "CSPINE", - "PatientPosition": "HFS", - "ProcedureStepDescription": "RM_CEREBRAL", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "T2w", - "ProtocolName": "T2w", - "ScanningSequence": "SE", - "SequenceVariant": "SK_SP_OSP", - "ScanOptions": "PFP", - "SequenceName": "_spcR_100", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS3D", "DIS2D"], - "SeriesNumber": 3, - "AcquisitionTime": "12:53:5.020000", - "AcquisitionNumber": 1, - "SliceThickness": 0.8, - "SAR": 0.592891, - "EchoTime": 0.12, - "RepetitionTime": 1.5, - "FlipAngle": 120, - "PartialFourier": 1, - "BaseResolution": 320, - "ShimSetting": [ - 3049, - 7189, - 10396, - 54, - -10, - -27, - 18, - -11 ], - "TxRefAmp": 310.104, - "PhaseResolution": 1, - "PhaseOversampling": 0.8, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC5-7;NC1,2;SP1", - "PulseSequenceDetails": "%SiemensSeq%_tse_vfl", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 100, - "EchoTrainLength": 76, - "PhaseEncodingSteps": 422, - "AcquisitionMatrixPE": 320, - "ReconMatrixPE": 320, - "ParallelReductionFactorInPlane": 3, - "PixelBandwidth": 625, - "DwellTime": 2.5e-06, - "ImageOrientationPatientDICOM": [ - 0, - 1, - 0, - 0, - 0, - -1 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 GCC5.3.1" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma_fit", + "InstitutionName": "HOSPITAL_CLINIC_BARCELONA", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "C_Villarroel_170_Barcelona_District_ES_08036", + "DeviceSerialNumber": "167044", + "StationName": "MRC35200", + "BodyPartExamined": "CSPINE", + "PatientPosition": "HFS", + "ProcedureStepDescription": "RM_CEREBRAL", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "T2w", + "ProtocolName": "T2w", + "ScanningSequence": "SE", + "SequenceVariant": "SK_SP_OSP", + "ScanOptions": "PFP", + "SequenceName": "_spcR_100", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS3D", + "DIS2D" + ], + "SeriesNumber": 3, + "AcquisitionTime": "12:53:5.020000", + "AcquisitionNumber": 1, + "SliceThickness": 0.8, + "SAR": 0.592891, + "EchoTime": 0.12, + "RepetitionTime": 1.5, + "FlipAngle": 120, + "PartialFourier": 1, + "BaseResolution": 320, + "ShimSetting": [ + 3049, + 7189, + 10396, + 54, + -10, + -27, + 18, + -11 + ], + "TxRefAmp": 310.104, + "PhaseResolution": 1, + "PhaseOversampling": 0.8, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC5-7;NC1,2;SP1", + "PulseSequenceDetails": "%SiemensSeq%_tse_vfl", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "EchoTrainLength": 76, + "PhaseEncodingSteps": 422, + "AcquisitionMatrixPE": 320, + "ReconMatrixPE": 320, + "ParallelReductionFactorInPlane": 3, + "PixelBandwidth": 625, + "DwellTime": 2.5e-06, + "ImageOrientationPatientDICOM": [ + 0, + 1, + 0, + 0, + 0, + -1 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 GCC5.3.1", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-barcelona04/anat/sub-barcelona04_flip-1_mt-on_space-other_MTS.json b/derivatives/data_preprocessed/sub-barcelona04/anat/sub-barcelona04_flip-1_mt-on_space-other_MTS.json index a18fd79106..97e5b5bf5a 100644 --- a/derivatives/data_preprocessed/sub-barcelona04/anat/sub-barcelona04_flip-1_mt-on_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-barcelona04/anat/sub-barcelona04_flip-1_mt-on_space-other_MTS.json @@ -1,65 +1,75 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma_fit", - "InstitutionName": "HOSPITAL_CLINIC_BARCELONA", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "C_Villarroel_170_Barcelona_District_ES_08036", - "DeviceSerialNumber": "167044", - "StationName": "MRC35200", - "BodyPartExamined": "CSPINE", - "PatientPosition": "HFS", - "ProcedureStepDescription": "RM_CEREBRAL", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-MT1", - "ProtocolName": "GRE-MT1", - "ScanningSequence": "GR", - "SequenceVariant": "MTC_SP", - "ScanOptions": "MT", - "SequenceName": "_fl3d1", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "DIS2D"], - "SeriesNumber": 6, - "AcquisitionTime": "12:32:16.917500", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SAR": 0.565088, - "EchoTime": 0.00313, - "RepetitionTime": 0.035, - "FlipAngle": 9, - "PartialFourier": 1, - "BaseResolution": 256, - "ShimSetting": [ - 3054, - 7185, - 10488, - -1700, - 111, - 2121, - -814, - 43 ], - "TxRefAmp": 281.653, - "PhaseResolution": 1, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC5-7;NC1,2", - "PulseSequenceDetails": "%SiemensSeq%_gre", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 100, - "PhaseEncodingSteps": 255, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 256, - "ParallelReductionFactorInPlane": 2, - "PixelBandwidth": 260, - "DwellTime": 7.5e-06, - "ImageOrientationPatientDICOM": [ - 1, - 0, - 0, - 0, - 0.980955, - 0.194234 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 GCC5.3.1" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma_fit", + "InstitutionName": "HOSPITAL_CLINIC_BARCELONA", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "C_Villarroel_170_Barcelona_District_ES_08036", + "DeviceSerialNumber": "167044", + "StationName": "MRC35200", + "BodyPartExamined": "CSPINE", + "PatientPosition": "HFS", + "ProcedureStepDescription": "RM_CEREBRAL", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-MT1", + "ProtocolName": "GRE-MT1", + "ScanningSequence": "GR", + "SequenceVariant": "MTC_SP", + "ScanOptions": "MT", + "SequenceName": "_fl3d1", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "DIS2D" + ], + "SeriesNumber": 6, + "AcquisitionTime": "12:32:16.917500", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SAR": 0.565088, + "EchoTime": 0.00313, + "RepetitionTime": 0.035, + "FlipAngle": 9, + "PartialFourier": 1, + "BaseResolution": 256, + "ShimSetting": [ + 3054, + 7185, + 10488, + -1700, + 111, + 2121, + -814, + 43 + ], + "TxRefAmp": 281.653, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC5-7;NC1,2", + "PulseSequenceDetails": "%SiemensSeq%_gre", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 255, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "ParallelReductionFactorInPlane": 2, + "PixelBandwidth": 260, + "DwellTime": 7.5e-06, + "ImageOrientationPatientDICOM": [ + 1, + 0, + 0, + 0, + 0.980955, + 0.194234 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 GCC5.3.1", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-barcelona04/anat/sub-barcelona04_flip-2_mt-off_space-other_MTS.json b/derivatives/data_preprocessed/sub-barcelona04/anat/sub-barcelona04_flip-2_mt-off_space-other_MTS.json index 22ac8c5c55..57fab2eb82 100644 --- a/derivatives/data_preprocessed/sub-barcelona04/anat/sub-barcelona04_flip-2_mt-off_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-barcelona04/anat/sub-barcelona04_flip-2_mt-off_space-other_MTS.json @@ -1,64 +1,74 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma_fit", - "InstitutionName": "HOSPITAL_CLINIC_BARCELONA", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "C_Villarroel_170_Barcelona_District_ES_08036", - "DeviceSerialNumber": "167044", - "StationName": "MRC35200", - "BodyPartExamined": "CSPINE", - "PatientPosition": "HFS", - "ProcedureStepDescription": "RM_CEREBRAL", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-T1w", - "ProtocolName": "GRE-T1w", - "ScanningSequence": "GR", - "SequenceVariant": "SP", - "SequenceName": "_fl3d1", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "DIS2D"], - "SeriesNumber": 8, - "AcquisitionTime": "12:36:43.132500", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SAR": 0.0366386, - "EchoTime": 0.00313, - "RepetitionTime": 0.015, - "FlipAngle": 15, - "PartialFourier": 1, - "BaseResolution": 256, - "ShimSetting": [ - 3054, - 7185, - 10488, - -1700, - 111, - 2121, - -814, - 43 ], - "TxRefAmp": 281.653, - "PhaseResolution": 1, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC5-7;NC1,2", - "PulseSequenceDetails": "%SiemensSeq%_gre", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 100, - "PhaseEncodingSteps": 255, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 256, - "ParallelReductionFactorInPlane": 2, - "PixelBandwidth": 260, - "DwellTime": 7.5e-06, - "ImageOrientationPatientDICOM": [ - 1, - 0, - 0, - 0, - 0.980955, - 0.194234 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 GCC5.3.1" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma_fit", + "InstitutionName": "HOSPITAL_CLINIC_BARCELONA", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "C_Villarroel_170_Barcelona_District_ES_08036", + "DeviceSerialNumber": "167044", + "StationName": "MRC35200", + "BodyPartExamined": "CSPINE", + "PatientPosition": "HFS", + "ProcedureStepDescription": "RM_CEREBRAL", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-T1w", + "ProtocolName": "GRE-T1w", + "ScanningSequence": "GR", + "SequenceVariant": "SP", + "SequenceName": "_fl3d1", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "DIS2D" + ], + "SeriesNumber": 8, + "AcquisitionTime": "12:36:43.132500", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SAR": 0.0366386, + "EchoTime": 0.00313, + "RepetitionTime": 0.015, + "FlipAngle": 15, + "PartialFourier": 1, + "BaseResolution": 256, + "ShimSetting": [ + 3054, + 7185, + 10488, + -1700, + 111, + 2121, + -814, + 43 + ], + "TxRefAmp": 281.653, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC5-7;NC1,2", + "PulseSequenceDetails": "%SiemensSeq%_gre", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 255, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "ParallelReductionFactorInPlane": 2, + "PixelBandwidth": 260, + "DwellTime": 7.5e-06, + "ImageOrientationPatientDICOM": [ + 1, + 0, + 0, + 0, + 0.980955, + 0.194234 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 GCC5.3.1", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-barcelona04/anat/sub-barcelona04_space-other_T1w.json b/derivatives/data_preprocessed/sub-barcelona04/anat/sub-barcelona04_space-other_T1w.json index fe72baae32..577cd7b26d 100644 --- a/derivatives/data_preprocessed/sub-barcelona04/anat/sub-barcelona04_space-other_T1w.json +++ b/derivatives/data_preprocessed/sub-barcelona04/anat/sub-barcelona04_space-other_T1w.json @@ -1,66 +1,79 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma_fit", - "InstitutionName": "HOSPITAL_CLINIC_BARCELONA", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "C_Villarroel_170_Barcelona_District_ES_08036", - "DeviceSerialNumber": "167044", - "StationName": "MRC35200", - "BodyPartExamined": "CSPINE", - "PatientPosition": "HFS", - "ProcedureStepDescription": "RM_CEREBRAL", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "T1w", - "ProtocolName": "T1w", - "ScanningSequence": "GR_IR", - "SequenceVariant": "SK_SP_MP", - "ScanOptions": "IR", - "SequenceName": "_tfl3d1_16", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS3D", "DIS2D"], - "SeriesNumber": 2, - "AcquisitionTime": "12:19:44.235000", - "AcquisitionNumber": 1, - "SliceThickness": 1, - "SAR": 0.0835498, - "EchoTime": 0.00372, - "RepetitionTime": 2, - "InversionTime": 1, - "FlipAngle": 9, - "PartialFourier": 1, - "BaseResolution": 320, - "ShimSetting": [ - 3049, - 7189, - 10396, - 54, - -10, - -27, - 18, - -11 ], - "TxRefAmp": 289.886, - "PhaseResolution": 1, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC5-7;NC1,2;SP1", - "PulseSequenceDetails": "%SiemensSeq%_tfl", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 81.25, - "PhaseEncodingSteps": 259, - "AcquisitionMatrixPE": 260, - "ReconMatrixPE": 320, - "ParallelReductionFactorInPlane": 2, - "PixelBandwidth": 150, - "DwellTime": 1.04e-05, - "ImageOrientationPatientDICOM": [ - 0, - 1, - 0, - 0, - 0, - -1 ], - "InPlanePhaseEncodingDirectionDICOM": "ROW", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 GCC5.3.1" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma_fit", + "InstitutionName": "HOSPITAL_CLINIC_BARCELONA", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "C_Villarroel_170_Barcelona_District_ES_08036", + "DeviceSerialNumber": "167044", + "StationName": "MRC35200", + "BodyPartExamined": "CSPINE", + "PatientPosition": "HFS", + "ProcedureStepDescription": "RM_CEREBRAL", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "T1w", + "ProtocolName": "T1w", + "ScanningSequence": "GR_IR", + "SequenceVariant": "SK_SP_MP", + "ScanOptions": "IR", + "SequenceName": "_tfl3d1_16", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS3D", + "DIS2D" + ], + "SeriesNumber": 2, + "AcquisitionTime": "12:19:44.235000", + "AcquisitionNumber": 1, + "SliceThickness": 1, + "SAR": 0.0835498, + "EchoTime": 0.00372, + "RepetitionTime": 2, + "InversionTime": 1, + "FlipAngle": 9, + "PartialFourier": 1, + "BaseResolution": 320, + "ShimSetting": [ + 3049, + 7189, + 10396, + 54, + -10, + -27, + 18, + -11 + ], + "TxRefAmp": 289.886, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC5-7;NC1,2;SP1", + "PulseSequenceDetails": "%SiemensSeq%_tfl", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 81.25, + "PhaseEncodingSteps": 259, + "AcquisitionMatrixPE": 260, + "ReconMatrixPE": 320, + "ParallelReductionFactorInPlane": 2, + "PixelBandwidth": 150, + "DwellTime": 1.04e-05, + "ImageOrientationPatientDICOM": [ + 0, + 1, + 0, + 0, + 0, + -1 + ], + "InPlanePhaseEncodingDirectionDICOM": "ROW", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 GCC5.3.1", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-barcelona04/anat/sub-barcelona04_space-other_T2star.json b/derivatives/data_preprocessed/sub-barcelona04/anat/sub-barcelona04_space-other_T2star.json index 06f84dd680..bf66907cd9 100644 --- a/derivatives/data_preprocessed/sub-barcelona04/anat/sub-barcelona04_space-other_T2star.json +++ b/derivatives/data_preprocessed/sub-barcelona04/anat/sub-barcelona04_space-other_T2star.json @@ -72,5 +72,9 @@ "InPlanePhaseEncodingDirectionDICOM": "COL", "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20180622 GCC5.3.1", - "AcquisitionDuration": 285.0 + "AcquisitionDuration": 285.0, + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-barcelona04/anat/sub-barcelona04_space-other_T2w.json b/derivatives/data_preprocessed/sub-barcelona04/anat/sub-barcelona04_space-other_T2w.json index 3307b34898..70ec61a9d0 100644 --- a/derivatives/data_preprocessed/sub-barcelona04/anat/sub-barcelona04_space-other_T2w.json +++ b/derivatives/data_preprocessed/sub-barcelona04/anat/sub-barcelona04_space-other_T2w.json @@ -1,67 +1,80 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma_fit", - "InstitutionName": "HOSPITAL_CLINIC_BARCELONA", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "C_Villarroel_170_Barcelona_District_ES_08036", - "DeviceSerialNumber": "167044", - "StationName": "MRC35200", - "BodyPartExamined": "CSPINE", - "PatientPosition": "HFS", - "ProcedureStepDescription": "RM_CEREBRAL", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "T2w", - "ProtocolName": "T2w", - "ScanningSequence": "SE", - "SequenceVariant": "SK_SP_OSP", - "ScanOptions": "PFP", - "SequenceName": "_spcR_100", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS3D", "DIS2D"], - "SeriesNumber": 4, - "AcquisitionTime": "12:24:32.010000", - "AcquisitionNumber": 1, - "SliceThickness": 0.8, - "SAR": 0.621509, - "EchoTime": 0.12, - "RepetitionTime": 1.5, - "FlipAngle": 120, - "PartialFourier": 1, - "BaseResolution": 320, - "ShimSetting": [ - 3049, - 7189, - 10396, - 54, - -10, - -27, - 18, - -11 ], - "TxRefAmp": 289.886, - "PhaseResolution": 1, - "PhaseOversampling": 0.8, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC5-7;NC1,2;SP1", - "PulseSequenceDetails": "%SiemensSeq%_tse_vfl", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 100, - "EchoTrainLength": 76, - "PhaseEncodingSteps": 422, - "AcquisitionMatrixPE": 320, - "ReconMatrixPE": 320, - "ParallelReductionFactorInPlane": 3, - "PixelBandwidth": 625, - "DwellTime": 2.5e-06, - "ImageOrientationPatientDICOM": [ - 0, - 1, - 0, - 0, - 0, - -1 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 GCC5.3.1" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma_fit", + "InstitutionName": "HOSPITAL_CLINIC_BARCELONA", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "C_Villarroel_170_Barcelona_District_ES_08036", + "DeviceSerialNumber": "167044", + "StationName": "MRC35200", + "BodyPartExamined": "CSPINE", + "PatientPosition": "HFS", + "ProcedureStepDescription": "RM_CEREBRAL", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "T2w", + "ProtocolName": "T2w", + "ScanningSequence": "SE", + "SequenceVariant": "SK_SP_OSP", + "ScanOptions": "PFP", + "SequenceName": "_spcR_100", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS3D", + "DIS2D" + ], + "SeriesNumber": 4, + "AcquisitionTime": "12:24:32.010000", + "AcquisitionNumber": 1, + "SliceThickness": 0.8, + "SAR": 0.621509, + "EchoTime": 0.12, + "RepetitionTime": 1.5, + "FlipAngle": 120, + "PartialFourier": 1, + "BaseResolution": 320, + "ShimSetting": [ + 3049, + 7189, + 10396, + 54, + -10, + -27, + 18, + -11 + ], + "TxRefAmp": 289.886, + "PhaseResolution": 1, + "PhaseOversampling": 0.8, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC5-7;NC1,2;SP1", + "PulseSequenceDetails": "%SiemensSeq%_tse_vfl", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "EchoTrainLength": 76, + "PhaseEncodingSteps": 422, + "AcquisitionMatrixPE": 320, + "ReconMatrixPE": 320, + "ParallelReductionFactorInPlane": 3, + "PixelBandwidth": 625, + "DwellTime": 2.5e-06, + "ImageOrientationPatientDICOM": [ + 0, + 1, + 0, + 0, + 0, + -1 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 GCC5.3.1", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-barcelona05/anat/sub-barcelona05_flip-1_mt-on_space-other_MTS.json b/derivatives/data_preprocessed/sub-barcelona05/anat/sub-barcelona05_flip-1_mt-on_space-other_MTS.json index 61e2b41dd4..1f02d2bcd9 100644 --- a/derivatives/data_preprocessed/sub-barcelona05/anat/sub-barcelona05_flip-1_mt-on_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-barcelona05/anat/sub-barcelona05_flip-1_mt-on_space-other_MTS.json @@ -1,65 +1,75 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma_fit", - "InstitutionName": "HOSPITAL_CLINIC_BARCELONA", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "C_Villarroel_170_Barcelona_District_ES_08036", - "DeviceSerialNumber": "167044", - "StationName": "MRC35200", - "BodyPartExamined": "CSPINE", - "PatientPosition": "HFS", - "ProcedureStepDescription": "RM_CEREBRAL", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-MT1", - "ProtocolName": "GRE-MT1", - "ScanningSequence": "GR", - "SequenceVariant": "MTC_SP", - "ScanOptions": "MT", - "SequenceName": "_fl3d1", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "DIS2D"], - "SeriesNumber": 5, - "AcquisitionTime": "10:55:9.922500", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SAR": 0.525099, - "EchoTime": 0.00313, - "RepetitionTime": 0.035, - "FlipAngle": 9, - "PartialFourier": 1, - "BaseResolution": 256, - "ShimSetting": [ - 3042, - 7267, - 10535, - -2119, - 431, - 2624, - -690, - -299 ], - "TxRefAmp": 255.297, - "PhaseResolution": 1, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC7;NC1,2", - "PulseSequenceDetails": "%SiemensSeq%_gre", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 100, - "PhaseEncodingSteps": 255, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 256, - "ParallelReductionFactorInPlane": 2, - "PixelBandwidth": 260, - "DwellTime": 7.5e-06, - "ImageOrientationPatientDICOM": [ - 1, - 0, - 0, - 0, - 1, - 0 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 GCC5.3.1" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma_fit", + "InstitutionName": "HOSPITAL_CLINIC_BARCELONA", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "C_Villarroel_170_Barcelona_District_ES_08036", + "DeviceSerialNumber": "167044", + "StationName": "MRC35200", + "BodyPartExamined": "CSPINE", + "PatientPosition": "HFS", + "ProcedureStepDescription": "RM_CEREBRAL", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-MT1", + "ProtocolName": "GRE-MT1", + "ScanningSequence": "GR", + "SequenceVariant": "MTC_SP", + "ScanOptions": "MT", + "SequenceName": "_fl3d1", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "DIS2D" + ], + "SeriesNumber": 5, + "AcquisitionTime": "10:55:9.922500", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SAR": 0.525099, + "EchoTime": 0.00313, + "RepetitionTime": 0.035, + "FlipAngle": 9, + "PartialFourier": 1, + "BaseResolution": 256, + "ShimSetting": [ + 3042, + 7267, + 10535, + -2119, + 431, + 2624, + -690, + -299 + ], + "TxRefAmp": 255.297, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC7;NC1,2", + "PulseSequenceDetails": "%SiemensSeq%_gre", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 255, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "ParallelReductionFactorInPlane": 2, + "PixelBandwidth": 260, + "DwellTime": 7.5e-06, + "ImageOrientationPatientDICOM": [ + 1, + 0, + 0, + 0, + 1, + 0 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 GCC5.3.1", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-barcelona05/anat/sub-barcelona05_flip-2_mt-off_space-other_MTS.json b/derivatives/data_preprocessed/sub-barcelona05/anat/sub-barcelona05_flip-2_mt-off_space-other_MTS.json index 4b636bd60b..c5e23fe2fd 100644 --- a/derivatives/data_preprocessed/sub-barcelona05/anat/sub-barcelona05_flip-2_mt-off_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-barcelona05/anat/sub-barcelona05_flip-2_mt-off_space-other_MTS.json @@ -1,64 +1,74 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma_fit", - "InstitutionName": "HOSPITAL_CLINIC_BARCELONA", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "C_Villarroel_170_Barcelona_District_ES_08036", - "DeviceSerialNumber": "167044", - "StationName": "MRC35200", - "BodyPartExamined": "CSPINE", - "PatientPosition": "HFS", - "ProcedureStepDescription": "RM_CEREBRAL", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-T1w", - "ProtocolName": "GRE-T1w", - "ScanningSequence": "GR", - "SequenceVariant": "SP", - "SequenceName": "_fl3d1", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "DIS2D"], - "SeriesNumber": 7, - "AcquisitionTime": "10:59:34.985000", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SAR": 0.0340458, - "EchoTime": 0.00313, - "RepetitionTime": 0.015, - "FlipAngle": 15, - "PartialFourier": 1, - "BaseResolution": 256, - "ShimSetting": [ - 3042, - 7267, - 10535, - -2119, - 431, - 2624, - -690, - -299 ], - "TxRefAmp": 255.297, - "PhaseResolution": 1, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC7;NC1,2", - "PulseSequenceDetails": "%SiemensSeq%_gre", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 100, - "PhaseEncodingSteps": 255, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 256, - "ParallelReductionFactorInPlane": 2, - "PixelBandwidth": 260, - "DwellTime": 7.5e-06, - "ImageOrientationPatientDICOM": [ - 1, - 0, - 0, - 0, - 1, - 0 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 GCC5.3.1" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma_fit", + "InstitutionName": "HOSPITAL_CLINIC_BARCELONA", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "C_Villarroel_170_Barcelona_District_ES_08036", + "DeviceSerialNumber": "167044", + "StationName": "MRC35200", + "BodyPartExamined": "CSPINE", + "PatientPosition": "HFS", + "ProcedureStepDescription": "RM_CEREBRAL", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-T1w", + "ProtocolName": "GRE-T1w", + "ScanningSequence": "GR", + "SequenceVariant": "SP", + "SequenceName": "_fl3d1", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "DIS2D" + ], + "SeriesNumber": 7, + "AcquisitionTime": "10:59:34.985000", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SAR": 0.0340458, + "EchoTime": 0.00313, + "RepetitionTime": 0.015, + "FlipAngle": 15, + "PartialFourier": 1, + "BaseResolution": 256, + "ShimSetting": [ + 3042, + 7267, + 10535, + -2119, + 431, + 2624, + -690, + -299 + ], + "TxRefAmp": 255.297, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC7;NC1,2", + "PulseSequenceDetails": "%SiemensSeq%_gre", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 255, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "ParallelReductionFactorInPlane": 2, + "PixelBandwidth": 260, + "DwellTime": 7.5e-06, + "ImageOrientationPatientDICOM": [ + 1, + 0, + 0, + 0, + 1, + 0 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 GCC5.3.1", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-barcelona05/anat/sub-barcelona05_space-other_T1w.json b/derivatives/data_preprocessed/sub-barcelona05/anat/sub-barcelona05_space-other_T1w.json index 2a62ceb44e..f2d686180e 100644 --- a/derivatives/data_preprocessed/sub-barcelona05/anat/sub-barcelona05_space-other_T1w.json +++ b/derivatives/data_preprocessed/sub-barcelona05/anat/sub-barcelona05_space-other_T1w.json @@ -1,66 +1,79 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma_fit", - "InstitutionName": "HOSPITAL_CLINIC_BARCELONA", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "C_Villarroel_170_Barcelona_District_ES_08036", - "DeviceSerialNumber": "167044", - "StationName": "MRC35200", - "BodyPartExamined": "CSPINE", - "PatientPosition": "HFS", - "ProcedureStepDescription": "RM_CEREBRAL", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "T1w", - "ProtocolName": "T1w", - "ScanningSequence": "GR_IR", - "SequenceVariant": "SK_SP_MP", - "ScanOptions": "IR", - "SequenceName": "_tfl3d1_16", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS3D", "DIS2D"], - "SeriesNumber": 2, - "AcquisitionTime": "10:39:50.957500", - "AcquisitionNumber": 1, - "SliceThickness": 1, - "SAR": 0.0819348, - "EchoTime": 0.00372, - "RepetitionTime": 2, - "InversionTime": 1, - "FlipAngle": 9, - "PartialFourier": 1, - "BaseResolution": 320, - "ShimSetting": [ - 3049, - 7189, - 10396, - 54, - -10, - -27, - 18, - -11 ], - "TxRefAmp": 252.259, - "PhaseResolution": 1, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC5-7;NC1,2;SP1", - "PulseSequenceDetails": "%SiemensSeq%_tfl", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 81.25, - "PhaseEncodingSteps": 259, - "AcquisitionMatrixPE": 260, - "ReconMatrixPE": 320, - "ParallelReductionFactorInPlane": 2, - "PixelBandwidth": 150, - "DwellTime": 1.04e-05, - "ImageOrientationPatientDICOM": [ - 0, - 1, - 0, - 0, - 0, - -1 ], - "InPlanePhaseEncodingDirectionDICOM": "ROW", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 GCC5.3.1" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma_fit", + "InstitutionName": "HOSPITAL_CLINIC_BARCELONA", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "C_Villarroel_170_Barcelona_District_ES_08036", + "DeviceSerialNumber": "167044", + "StationName": "MRC35200", + "BodyPartExamined": "CSPINE", + "PatientPosition": "HFS", + "ProcedureStepDescription": "RM_CEREBRAL", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "T1w", + "ProtocolName": "T1w", + "ScanningSequence": "GR_IR", + "SequenceVariant": "SK_SP_MP", + "ScanOptions": "IR", + "SequenceName": "_tfl3d1_16", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS3D", + "DIS2D" + ], + "SeriesNumber": 2, + "AcquisitionTime": "10:39:50.957500", + "AcquisitionNumber": 1, + "SliceThickness": 1, + "SAR": 0.0819348, + "EchoTime": 0.00372, + "RepetitionTime": 2, + "InversionTime": 1, + "FlipAngle": 9, + "PartialFourier": 1, + "BaseResolution": 320, + "ShimSetting": [ + 3049, + 7189, + 10396, + 54, + -10, + -27, + 18, + -11 + ], + "TxRefAmp": 252.259, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC5-7;NC1,2;SP1", + "PulseSequenceDetails": "%SiemensSeq%_tfl", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 81.25, + "PhaseEncodingSteps": 259, + "AcquisitionMatrixPE": 260, + "ReconMatrixPE": 320, + "ParallelReductionFactorInPlane": 2, + "PixelBandwidth": 150, + "DwellTime": 1.04e-05, + "ImageOrientationPatientDICOM": [ + 0, + 1, + 0, + 0, + 0, + -1 + ], + "InPlanePhaseEncodingDirectionDICOM": "ROW", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 GCC5.3.1", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-barcelona05/anat/sub-barcelona05_space-other_T2star.json b/derivatives/data_preprocessed/sub-barcelona05/anat/sub-barcelona05_space-other_T2star.json index 7ef0ea5017..79af1b945a 100644 --- a/derivatives/data_preprocessed/sub-barcelona05/anat/sub-barcelona05_space-other_T2star.json +++ b/derivatives/data_preprocessed/sub-barcelona05/anat/sub-barcelona05_space-other_T2star.json @@ -72,5 +72,9 @@ "InPlanePhaseEncodingDirectionDICOM": "COL", "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20180622 GCC5.3.1", - "AcquisitionDuration": 285.0 + "AcquisitionDuration": 285.0, + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-barcelona05/anat/sub-barcelona05_space-other_T2w.json b/derivatives/data_preprocessed/sub-barcelona05/anat/sub-barcelona05_space-other_T2w.json index 2a7fc24ec6..8dada85e91 100644 --- a/derivatives/data_preprocessed/sub-barcelona05/anat/sub-barcelona05_space-other_T2w.json +++ b/derivatives/data_preprocessed/sub-barcelona05/anat/sub-barcelona05_space-other_T2w.json @@ -1,67 +1,80 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma_fit", - "InstitutionName": "HOSPITAL_CLINIC_BARCELONA", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "C_Villarroel_170_Barcelona_District_ES_08036", - "DeviceSerialNumber": "167044", - "StationName": "MRC35200", - "BodyPartExamined": "CSPINE", - "PatientPosition": "HFS", - "ProcedureStepDescription": "RM_CEREBRAL", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "T2w", - "ProtocolName": "T2w", - "ScanningSequence": "SE", - "SequenceVariant": "SK_SP_OSP", - "ScanOptions": "PFP", - "SequenceName": "_spcR_100", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS3D", "DIS2D"], - "SeriesNumber": 3, - "AcquisitionTime": "10:45:22.252500", - "AcquisitionNumber": 1, - "SliceThickness": 0.8, - "SAR": 0.609496, - "EchoTime": 0.12, - "RepetitionTime": 1.5, - "FlipAngle": 120, - "PartialFourier": 1, - "BaseResolution": 320, - "ShimSetting": [ - 3049, - 7189, - 10396, - 54, - -10, - -27, - 18, - -11 ], - "TxRefAmp": 252.259, - "PhaseResolution": 1, - "PhaseOversampling": 0.8, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC5-7;NC1,2;SP1", - "PulseSequenceDetails": "%SiemensSeq%_tse_vfl", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 100, - "EchoTrainLength": 76, - "PhaseEncodingSteps": 422, - "AcquisitionMatrixPE": 320, - "ReconMatrixPE": 320, - "ParallelReductionFactorInPlane": 3, - "PixelBandwidth": 625, - "DwellTime": 2.5e-06, - "ImageOrientationPatientDICOM": [ - 0, - 1, - 0, - 0, - 0, - -1 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 GCC5.3.1" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma_fit", + "InstitutionName": "HOSPITAL_CLINIC_BARCELONA", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "C_Villarroel_170_Barcelona_District_ES_08036", + "DeviceSerialNumber": "167044", + "StationName": "MRC35200", + "BodyPartExamined": "CSPINE", + "PatientPosition": "HFS", + "ProcedureStepDescription": "RM_CEREBRAL", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "T2w", + "ProtocolName": "T2w", + "ScanningSequence": "SE", + "SequenceVariant": "SK_SP_OSP", + "ScanOptions": "PFP", + "SequenceName": "_spcR_100", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS3D", + "DIS2D" + ], + "SeriesNumber": 3, + "AcquisitionTime": "10:45:22.252500", + "AcquisitionNumber": 1, + "SliceThickness": 0.8, + "SAR": 0.609496, + "EchoTime": 0.12, + "RepetitionTime": 1.5, + "FlipAngle": 120, + "PartialFourier": 1, + "BaseResolution": 320, + "ShimSetting": [ + 3049, + 7189, + 10396, + 54, + -10, + -27, + 18, + -11 + ], + "TxRefAmp": 252.259, + "PhaseResolution": 1, + "PhaseOversampling": 0.8, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC5-7;NC1,2;SP1", + "PulseSequenceDetails": "%SiemensSeq%_tse_vfl", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "EchoTrainLength": 76, + "PhaseEncodingSteps": 422, + "AcquisitionMatrixPE": 320, + "ReconMatrixPE": 320, + "ParallelReductionFactorInPlane": 3, + "PixelBandwidth": 625, + "DwellTime": 2.5e-06, + "ImageOrientationPatientDICOM": [ + 0, + 1, + 0, + 0, + 0, + -1 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 GCC5.3.1", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-barcelona06/anat/sub-barcelona06_flip-1_mt-on_space-other_MTS.json b/derivatives/data_preprocessed/sub-barcelona06/anat/sub-barcelona06_flip-1_mt-on_space-other_MTS.json index ad64060471..91f02b7a8c 100644 --- a/derivatives/data_preprocessed/sub-barcelona06/anat/sub-barcelona06_flip-1_mt-on_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-barcelona06/anat/sub-barcelona06_flip-1_mt-on_space-other_MTS.json @@ -1,65 +1,75 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma_fit", - "InstitutionName": "HOSPITAL_CLINIC_BARCELONA", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "C_Villarroel_170_Barcelona_District_ES_08036", - "DeviceSerialNumber": "167044", - "StationName": "MRC35200", - "BodyPartExamined": "CSPINE", - "PatientPosition": "HFS", - "ProcedureStepDescription": "RM_CEREBRAL", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-MT1", - "ProtocolName": "GRE-MT1", - "ScanningSequence": "GR", - "SequenceVariant": "MTC_SP", - "ScanOptions": "MT", - "SequenceName": "_fl3d1", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "DIS2D"], - "SeriesNumber": 6, - "AcquisitionTime": "11:51:37.902500", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SAR": 0.707633, - "EchoTime": 0.00313, - "RepetitionTime": 0.035, - "FlipAngle": 9, - "PartialFourier": 1, - "BaseResolution": 256, - "ShimSetting": [ - 3053, - 7029, - 10439, - -1647, - 414, - 1915, - 131, - -42 ], - "TxRefAmp": 289.914, - "PhaseResolution": 1, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC7;NC1,2", - "PulseSequenceDetails": "%SiemensSeq%_gre", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 100, - "PhaseEncodingSteps": 255, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 256, - "ParallelReductionFactorInPlane": 2, - "PixelBandwidth": 260, - "DwellTime": 7.5e-06, - "ImageOrientationPatientDICOM": [ - 1, - 0, - 0, - 0, - 1, - 0 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 GCC5.3.1" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma_fit", + "InstitutionName": "HOSPITAL_CLINIC_BARCELONA", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "C_Villarroel_170_Barcelona_District_ES_08036", + "DeviceSerialNumber": "167044", + "StationName": "MRC35200", + "BodyPartExamined": "CSPINE", + "PatientPosition": "HFS", + "ProcedureStepDescription": "RM_CEREBRAL", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-MT1", + "ProtocolName": "GRE-MT1", + "ScanningSequence": "GR", + "SequenceVariant": "MTC_SP", + "ScanOptions": "MT", + "SequenceName": "_fl3d1", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "DIS2D" + ], + "SeriesNumber": 6, + "AcquisitionTime": "11:51:37.902500", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SAR": 0.707633, + "EchoTime": 0.00313, + "RepetitionTime": 0.035, + "FlipAngle": 9, + "PartialFourier": 1, + "BaseResolution": 256, + "ShimSetting": [ + 3053, + 7029, + 10439, + -1647, + 414, + 1915, + 131, + -42 + ], + "TxRefAmp": 289.914, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC7;NC1,2", + "PulseSequenceDetails": "%SiemensSeq%_gre", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 255, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "ParallelReductionFactorInPlane": 2, + "PixelBandwidth": 260, + "DwellTime": 7.5e-06, + "ImageOrientationPatientDICOM": [ + 1, + 0, + 0, + 0, + 1, + 0 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 GCC5.3.1", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-barcelona06/anat/sub-barcelona06_flip-2_mt-off_space-other_MTS.json b/derivatives/data_preprocessed/sub-barcelona06/anat/sub-barcelona06_flip-2_mt-off_space-other_MTS.json index 3bff28cced..d4caf72566 100644 --- a/derivatives/data_preprocessed/sub-barcelona06/anat/sub-barcelona06_flip-2_mt-off_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-barcelona06/anat/sub-barcelona06_flip-2_mt-off_space-other_MTS.json @@ -1,64 +1,74 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma_fit", - "InstitutionName": "HOSPITAL_CLINIC_BARCELONA", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "C_Villarroel_170_Barcelona_District_ES_08036", - "DeviceSerialNumber": "167044", - "StationName": "MRC35200", - "BodyPartExamined": "CSPINE", - "PatientPosition": "HFS", - "ProcedureStepDescription": "RM_CEREBRAL", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-T1w", - "ProtocolName": "GRE-T1w", - "ScanningSequence": "GR", - "SequenceVariant": "SP", - "SequenceName": "_fl3d1", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "DIS2D"], - "SeriesNumber": 8, - "AcquisitionTime": "11:56:2.942500", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SAR": 0.0458807, - "EchoTime": 0.00313, - "RepetitionTime": 0.015, - "FlipAngle": 15, - "PartialFourier": 1, - "BaseResolution": 256, - "ShimSetting": [ - 3053, - 7029, - 10439, - -1647, - 414, - 1915, - 131, - -42 ], - "TxRefAmp": 289.914, - "PhaseResolution": 1, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC7;NC1,2", - "PulseSequenceDetails": "%SiemensSeq%_gre", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 100, - "PhaseEncodingSteps": 255, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 256, - "ParallelReductionFactorInPlane": 2, - "PixelBandwidth": 260, - "DwellTime": 7.5e-06, - "ImageOrientationPatientDICOM": [ - 1, - 0, - 0, - 0, - 1, - 0 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 GCC5.3.1" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma_fit", + "InstitutionName": "HOSPITAL_CLINIC_BARCELONA", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "C_Villarroel_170_Barcelona_District_ES_08036", + "DeviceSerialNumber": "167044", + "StationName": "MRC35200", + "BodyPartExamined": "CSPINE", + "PatientPosition": "HFS", + "ProcedureStepDescription": "RM_CEREBRAL", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-T1w", + "ProtocolName": "GRE-T1w", + "ScanningSequence": "GR", + "SequenceVariant": "SP", + "SequenceName": "_fl3d1", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "DIS2D" + ], + "SeriesNumber": 8, + "AcquisitionTime": "11:56:2.942500", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SAR": 0.0458807, + "EchoTime": 0.00313, + "RepetitionTime": 0.015, + "FlipAngle": 15, + "PartialFourier": 1, + "BaseResolution": 256, + "ShimSetting": [ + 3053, + 7029, + 10439, + -1647, + 414, + 1915, + 131, + -42 + ], + "TxRefAmp": 289.914, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC7;NC1,2", + "PulseSequenceDetails": "%SiemensSeq%_gre", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 255, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "ParallelReductionFactorInPlane": 2, + "PixelBandwidth": 260, + "DwellTime": 7.5e-06, + "ImageOrientationPatientDICOM": [ + 1, + 0, + 0, + 0, + 1, + 0 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 GCC5.3.1", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-barcelona06/anat/sub-barcelona06_space-other_T1w.json b/derivatives/data_preprocessed/sub-barcelona06/anat/sub-barcelona06_space-other_T1w.json index cc2e8c8bf8..8badd60ce1 100644 --- a/derivatives/data_preprocessed/sub-barcelona06/anat/sub-barcelona06_space-other_T1w.json +++ b/derivatives/data_preprocessed/sub-barcelona06/anat/sub-barcelona06_space-other_T1w.json @@ -1,66 +1,79 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma_fit", - "InstitutionName": "HOSPITAL_CLINIC_BARCELONA", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "C_Villarroel_170_Barcelona_District_ES_08036", - "DeviceSerialNumber": "167044", - "StationName": "MRC35200", - "BodyPartExamined": "CSPINE", - "PatientPosition": "HFS", - "ProcedureStepDescription": "RM_CEREBRAL", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "T1w", - "ProtocolName": "T1w", - "ScanningSequence": "GR_IR", - "SequenceVariant": "SK_SP_MP", - "ScanOptions": "IR", - "SequenceName": "_tfl3d1_16", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS3D", "DIS2D"], - "SeriesNumber": 3, - "AcquisitionTime": "11:37:2.290000", - "AcquisitionNumber": 1, - "SliceThickness": 1, - "SAR": 0.102372, - "EchoTime": 0.00372, - "RepetitionTime": 2, - "InversionTime": 1, - "FlipAngle": 9, - "PartialFourier": 1, - "BaseResolution": 320, - "ShimSetting": [ - 3049, - 7189, - 10396, - 54, - -10, - -27, - 18, - -11 ], - "TxRefAmp": 292.499, - "PhaseResolution": 1, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC5-7;NC1,2;SP1", - "PulseSequenceDetails": "%SiemensSeq%_tfl", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 81.25, - "PhaseEncodingSteps": 259, - "AcquisitionMatrixPE": 260, - "ReconMatrixPE": 320, - "ParallelReductionFactorInPlane": 2, - "PixelBandwidth": 150, - "DwellTime": 1.04e-05, - "ImageOrientationPatientDICOM": [ - 0, - 1, - 0, - 0, - 0, - -1 ], - "InPlanePhaseEncodingDirectionDICOM": "ROW", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 GCC5.3.1" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma_fit", + "InstitutionName": "HOSPITAL_CLINIC_BARCELONA", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "C_Villarroel_170_Barcelona_District_ES_08036", + "DeviceSerialNumber": "167044", + "StationName": "MRC35200", + "BodyPartExamined": "CSPINE", + "PatientPosition": "HFS", + "ProcedureStepDescription": "RM_CEREBRAL", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "T1w", + "ProtocolName": "T1w", + "ScanningSequence": "GR_IR", + "SequenceVariant": "SK_SP_MP", + "ScanOptions": "IR", + "SequenceName": "_tfl3d1_16", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS3D", + "DIS2D" + ], + "SeriesNumber": 3, + "AcquisitionTime": "11:37:2.290000", + "AcquisitionNumber": 1, + "SliceThickness": 1, + "SAR": 0.102372, + "EchoTime": 0.00372, + "RepetitionTime": 2, + "InversionTime": 1, + "FlipAngle": 9, + "PartialFourier": 1, + "BaseResolution": 320, + "ShimSetting": [ + 3049, + 7189, + 10396, + 54, + -10, + -27, + 18, + -11 + ], + "TxRefAmp": 292.499, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC5-7;NC1,2;SP1", + "PulseSequenceDetails": "%SiemensSeq%_tfl", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 81.25, + "PhaseEncodingSteps": 259, + "AcquisitionMatrixPE": 260, + "ReconMatrixPE": 320, + "ParallelReductionFactorInPlane": 2, + "PixelBandwidth": 150, + "DwellTime": 1.04e-05, + "ImageOrientationPatientDICOM": [ + 0, + 1, + 0, + 0, + 0, + -1 + ], + "InPlanePhaseEncodingDirectionDICOM": "ROW", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 GCC5.3.1", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-barcelona06/anat/sub-barcelona06_space-other_T2star.json b/derivatives/data_preprocessed/sub-barcelona06/anat/sub-barcelona06_space-other_T2star.json index 06493d45da..b0b31b0717 100644 --- a/derivatives/data_preprocessed/sub-barcelona06/anat/sub-barcelona06_space-other_T2star.json +++ b/derivatives/data_preprocessed/sub-barcelona06/anat/sub-barcelona06_space-other_T2star.json @@ -72,5 +72,9 @@ "InPlanePhaseEncodingDirectionDICOM": "COL", "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20180622 GCC5.3.1", - "AcquisitionDuration": 285.0 + "AcquisitionDuration": 285.0, + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-barcelona06/anat/sub-barcelona06_space-other_T2w.json b/derivatives/data_preprocessed/sub-barcelona06/anat/sub-barcelona06_space-other_T2w.json index 67e175b1a7..4a6fc7b779 100644 --- a/derivatives/data_preprocessed/sub-barcelona06/anat/sub-barcelona06_space-other_T2w.json +++ b/derivatives/data_preprocessed/sub-barcelona06/anat/sub-barcelona06_space-other_T2w.json @@ -1,67 +1,80 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma_fit", - "InstitutionName": "HOSPITAL_CLINIC_BARCELONA", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "C_Villarroel_170_Barcelona_District_ES_08036", - "DeviceSerialNumber": "167044", - "StationName": "MRC35200", - "BodyPartExamined": "CSPINE", - "PatientPosition": "HFS", - "ProcedureStepDescription": "RM_CEREBRAL", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "T2w", - "ProtocolName": "T2w", - "ScanningSequence": "SE", - "SequenceVariant": "SK_SP_OSP", - "ScanOptions": "PFP", - "SequenceName": "_spcR_100", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS3D", "DIS2D"], - "SeriesNumber": 4, - "AcquisitionTime": "11:41:49.962500", - "AcquisitionNumber": 1, - "SliceThickness": 0.8, - "SAR": 0.761522, - "EchoTime": 0.12, - "RepetitionTime": 1.5, - "FlipAngle": 120, - "PartialFourier": 1, - "BaseResolution": 320, - "ShimSetting": [ - 3049, - 7189, - 10396, - 54, - -10, - -27, - 18, - -11 ], - "TxRefAmp": 292.499, - "PhaseResolution": 1, - "PhaseOversampling": 0.8, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC5-7;NC1,2;SP1", - "PulseSequenceDetails": "%SiemensSeq%_tse_vfl", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 100, - "EchoTrainLength": 76, - "PhaseEncodingSteps": 422, - "AcquisitionMatrixPE": 320, - "ReconMatrixPE": 320, - "ParallelReductionFactorInPlane": 3, - "PixelBandwidth": 625, - "DwellTime": 2.5e-06, - "ImageOrientationPatientDICOM": [ - 0, - 1, - 0, - 0, - 0, - -1 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 GCC5.3.1" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma_fit", + "InstitutionName": "HOSPITAL_CLINIC_BARCELONA", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "C_Villarroel_170_Barcelona_District_ES_08036", + "DeviceSerialNumber": "167044", + "StationName": "MRC35200", + "BodyPartExamined": "CSPINE", + "PatientPosition": "HFS", + "ProcedureStepDescription": "RM_CEREBRAL", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "T2w", + "ProtocolName": "T2w", + "ScanningSequence": "SE", + "SequenceVariant": "SK_SP_OSP", + "ScanOptions": "PFP", + "SequenceName": "_spcR_100", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS3D", + "DIS2D" + ], + "SeriesNumber": 4, + "AcquisitionTime": "11:41:49.962500", + "AcquisitionNumber": 1, + "SliceThickness": 0.8, + "SAR": 0.761522, + "EchoTime": 0.12, + "RepetitionTime": 1.5, + "FlipAngle": 120, + "PartialFourier": 1, + "BaseResolution": 320, + "ShimSetting": [ + 3049, + 7189, + 10396, + 54, + -10, + -27, + 18, + -11 + ], + "TxRefAmp": 292.499, + "PhaseResolution": 1, + "PhaseOversampling": 0.8, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC5-7;NC1,2;SP1", + "PulseSequenceDetails": "%SiemensSeq%_tse_vfl", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "EchoTrainLength": 76, + "PhaseEncodingSteps": 422, + "AcquisitionMatrixPE": 320, + "ReconMatrixPE": 320, + "ParallelReductionFactorInPlane": 3, + "PixelBandwidth": 625, + "DwellTime": 2.5e-06, + "ImageOrientationPatientDICOM": [ + 0, + 1, + 0, + 0, + 0, + -1 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 GCC5.3.1", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-beijingGE01/anat/sub-beijingGE01_space-other_T1w.json b/derivatives/data_preprocessed/sub-beijingGE01/anat/sub-beijingGE01_space-other_T1w.json index 0c57e84e22..bf4e92381a 100644 --- a/derivatives/data_preprocessed/sub-beijingGE01/anat/sub-beijingGE01_space-other_T1w.json +++ b/derivatives/data_preprocessed/sub-beijingGE01/anat/sub-beijingGE01_space-other_T1w.json @@ -1,50 +1,54 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 127.768, - "Manufacturer": "GE", - "ManufacturersModelName": "DISCOVERY_MR750", - "InstitutionName": "BeiJing_TIANTAN_Hospital-GX", - "DeviceSerialNumber": "0000082427040165", - "StationName": "GEHCGEHC", - "PatientPosition": "HFS", - "SoftwareVersions": "24_LX_MR_Software_release:DV24.0_R01_1344.a", - "MRAcquisitionType": "3D", - "SeriesDescription": "T1w", - "ProtocolName": "T1w", - "ScanningSequence": "GR", - "SequenceVariant": "SS_SP_SK", - "ScanOptions": "FAST_GEMS_EDR_GEMS_FILTERED_GEMS", + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 127.768, + "Manufacturer": "GE", + "ManufacturersModelName": "DISCOVERY_MR750", + "InstitutionName": "BeiJing_TIANTAN_Hospital-GX", + "DeviceSerialNumber": "0000082427040165", + "StationName": "GEHCGEHC", + "PatientPosition": "HFS", + "SoftwareVersions": "24_LX_MR_Software_release:DV24.0_R01_1344.a", + "MRAcquisitionType": "3D", + "SeriesDescription": "T1w", + "ProtocolName": "T1w", + "ScanningSequence": "GR", + "SequenceVariant": "SS_SP_SK", + "ScanOptions": "FAST_GEMS_EDR_GEMS_FILTERED_GEMS", "ImageType": [ - "ORIGINAL", - "PRIMARY", + "ORIGINAL", + "PRIMARY", "OTHER" - ], - "SeriesNumber": 3, - "AcquisitionTime": "17:22:20.000000", - "AcquisitionNumber": 1, - "SliceThickness": 1, - "SpacingBetweenSlices": 0.500001, - "SAR": 0.459276, - "EchoTime": 0.001748, - "RepetitionTime": 0.004028, - "InversionTime": 1, - "FlipAngle": 9, - "CoilString": "HDCTL_12", - "PercentPhaseFOV": 80, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 512, - "PixelBandwidth": 558.047, + ], + "SeriesNumber": 3, + "AcquisitionTime": "17:22:20.000000", + "AcquisitionNumber": 1, + "SliceThickness": 1, + "SpacingBetweenSlices": 0.500001, + "SAR": 0.459276, + "EchoTime": 0.001748, + "RepetitionTime": 0.004028, + "InversionTime": 1, + "FlipAngle": 9, + "CoilString": "HDCTL_12", + "PercentPhaseFOV": 80, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 512, + "PixelBandwidth": 558.047, "ImageOrientationPatientDICOM": [ - 0.0356197, - 0.999365, - 0.000423956, - 0.0232425, - -0.000404263, + 0.0356197, + 0.999365, + 0.000423956, + 0.0232425, + -0.000404263, -0.99973 - ], - "InPlanePhaseEncodingDirectionDICOM": "ROW", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20190902", - "Dcm2bidsVersion": "2.1.4" + ], + "InPlanePhaseEncodingDirectionDICOM": "ROW", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20190902", + "Dcm2bidsVersion": "2.1.4", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-beijingGE01/anat/sub-beijingGE01_space-other_T2star.json b/derivatives/data_preprocessed/sub-beijingGE01/anat/sub-beijingGE01_space-other_T2star.json index ce449c1ccf..a40815cf48 100644 --- a/derivatives/data_preprocessed/sub-beijingGE01/anat/sub-beijingGE01_space-other_T2star.json +++ b/derivatives/data_preprocessed/sub-beijingGE01/anat/sub-beijingGE01_space-other_T2star.json @@ -67,5 +67,9 @@ "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20190902", "Dcm2bidsVersion": "2.1.4", - "AcquisitionDuration": 288.0 + "AcquisitionDuration": 288.0, + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-beijingGE01/anat/sub-beijingGE01_space-other_T2w.json b/derivatives/data_preprocessed/sub-beijingGE01/anat/sub-beijingGE01_space-other_T2w.json index 898f511a87..4ed448059e 100644 --- a/derivatives/data_preprocessed/sub-beijingGE01/anat/sub-beijingGE01_space-other_T2w.json +++ b/derivatives/data_preprocessed/sub-beijingGE01/anat/sub-beijingGE01_space-other_T2w.json @@ -1,50 +1,54 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 127.768, - "Manufacturer": "GE", - "ManufacturersModelName": "DISCOVERY_MR750", - "InstitutionName": "BeiJing_TIANTAN_Hospital-GX", - "DeviceSerialNumber": "0000082427040165", - "StationName": "GEHCGEHC", - "PatientPosition": "HFS", - "SoftwareVersions": "24_LX_MR_Software_release:DV24.0_R01_1344.a", - "MRAcquisitionType": "3D", - "SeriesDescription": "T2w", - "ProtocolName": "T2w", - "ScanningSequence": "SE", - "SequenceVariant": "SK_OSP", - "ScanOptions": "FC_FREQ_AX_GEMS_FC_NPW_EDR_GEMS_FILTERED_GEMS", + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 127.768, + "Manufacturer": "GE", + "ManufacturersModelName": "DISCOVERY_MR750", + "InstitutionName": "BeiJing_TIANTAN_Hospital-GX", + "DeviceSerialNumber": "0000082427040165", + "StationName": "GEHCGEHC", + "PatientPosition": "HFS", + "SoftwareVersions": "24_LX_MR_Software_release:DV24.0_R01_1344.a", + "MRAcquisitionType": "3D", + "SeriesDescription": "T2w", + "ProtocolName": "T2w", + "ScanningSequence": "SE", + "SequenceVariant": "SK_OSP", + "ScanOptions": "FC_FREQ_AX_GEMS_FC_NPW_EDR_GEMS_FILTERED_GEMS", "ImageType": [ - "ORIGINAL", - "PRIMARY", + "ORIGINAL", + "PRIMARY", "OTHER" - ], - "SeriesNumber": 7, - "AcquisitionTime": "17:51:52.000000", - "AcquisitionNumber": 1, - "SliceThickness": 0.8, - "SpacingBetweenSlices": 0.8, - "SAR": 2.22855, - "EchoTime": 0.125387, - "RepetitionTime": 2.52, - "FlipAngle": 90, - "CoilString": "HDCTL_12", - "PercentPhaseFOV": 100, - "EchoTrainLength": 78, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 256, - "PixelBandwidth": 651.016, + ], + "SeriesNumber": 7, + "AcquisitionTime": "17:51:52.000000", + "AcquisitionNumber": 1, + "SliceThickness": 0.8, + "SpacingBetweenSlices": 0.8, + "SAR": 2.22855, + "EchoTime": 0.125387, + "RepetitionTime": 2.52, + "FlipAngle": 90, + "CoilString": "HDCTL_12", + "PercentPhaseFOV": 100, + "EchoTrainLength": 78, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "PixelBandwidth": 651.016, "ImageOrientationPatientDICOM": [ - 0.0641857, - 0.997938, - 0, - 0.0230748, - -0.00148416, + 0.0641857, + 0.997938, + 0, + 0.0230748, + -0.00148416, -0.999733 - ], - "InPlanePhaseEncodingDirectionDICOM": "ROW", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20190902", - "Dcm2bidsVersion": "2.1.4" + ], + "InPlanePhaseEncodingDirectionDICOM": "ROW", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20190902", + "Dcm2bidsVersion": "2.1.4", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-beijingGE02/anat/sub-beijingGE02_space-other_T1w.json b/derivatives/data_preprocessed/sub-beijingGE02/anat/sub-beijingGE02_space-other_T1w.json index b73369bd5c..0c59823a8b 100644 --- a/derivatives/data_preprocessed/sub-beijingGE02/anat/sub-beijingGE02_space-other_T1w.json +++ b/derivatives/data_preprocessed/sub-beijingGE02/anat/sub-beijingGE02_space-other_T1w.json @@ -1,50 +1,54 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 127.768, - "Manufacturer": "GE", - "ManufacturersModelName": "DISCOVERY_MR750", - "InstitutionName": "BeiJing_TIANTAN_Hospital-GX", - "DeviceSerialNumber": "0000082427040165", - "StationName": "GEHCGEHC", - "PatientPosition": "HFS", - "SoftwareVersions": "24_LX_MR_Software_release:DV24.0_R01_1344.a", - "MRAcquisitionType": "3D", - "SeriesDescription": "T1w", - "ProtocolName": "T1w", - "ScanningSequence": "GR", - "SequenceVariant": "SS_SP_SK", - "ScanOptions": "FAST_GEMS_EDR_GEMS_FILTERED_GEMS", + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 127.768, + "Manufacturer": "GE", + "ManufacturersModelName": "DISCOVERY_MR750", + "InstitutionName": "BeiJing_TIANTAN_Hospital-GX", + "DeviceSerialNumber": "0000082427040165", + "StationName": "GEHCGEHC", + "PatientPosition": "HFS", + "SoftwareVersions": "24_LX_MR_Software_release:DV24.0_R01_1344.a", + "MRAcquisitionType": "3D", + "SeriesDescription": "T1w", + "ProtocolName": "T1w", + "ScanningSequence": "GR", + "SequenceVariant": "SS_SP_SK", + "ScanOptions": "FAST_GEMS_EDR_GEMS_FILTERED_GEMS", "ImageType": [ - "ORIGINAL", - "PRIMARY", + "ORIGINAL", + "PRIMARY", "OTHER" - ], - "SeriesNumber": 2, - "AcquisitionTime": "19:54:4.000000", - "AcquisitionNumber": 1, - "SliceThickness": 1, - "SpacingBetweenSlices": 0.499999, - "SAR": 0.473262, - "EchoTime": 0.001772, - "RepetitionTime": 0.004064, - "InversionTime": 1, - "FlipAngle": 9, - "CoilString": "HDCTL_12", - "PercentPhaseFOV": 80, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 512, - "PixelBandwidth": 558.047, + ], + "SeriesNumber": 2, + "AcquisitionTime": "19:54:4.000000", + "AcquisitionNumber": 1, + "SliceThickness": 1, + "SpacingBetweenSlices": 0.499999, + "SAR": 0.473262, + "EchoTime": 0.001772, + "RepetitionTime": 0.004064, + "InversionTime": 1, + "FlipAngle": 9, + "CoilString": "HDCTL_12", + "PercentPhaseFOV": 80, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 512, + "PixelBandwidth": 558.047, "ImageOrientationPatientDICOM": [ - 0, - 1, - 0, - -0.0514056, - 0, + 0, + 1, + 0, + -0.0514056, + 0, -0.998678 - ], - "InPlanePhaseEncodingDirectionDICOM": "ROW", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20190902", - "Dcm2bidsVersion": "2.1.4" + ], + "InPlanePhaseEncodingDirectionDICOM": "ROW", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20190902", + "Dcm2bidsVersion": "2.1.4", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-beijingGE02/anat/sub-beijingGE02_space-other_T2star.json b/derivatives/data_preprocessed/sub-beijingGE02/anat/sub-beijingGE02_space-other_T2star.json index ab71724e34..cf31e17ba1 100644 --- a/derivatives/data_preprocessed/sub-beijingGE02/anat/sub-beijingGE02_space-other_T2star.json +++ b/derivatives/data_preprocessed/sub-beijingGE02/anat/sub-beijingGE02_space-other_T2star.json @@ -67,5 +67,9 @@ "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20190902", "Dcm2bidsVersion": "2.1.4", - "AcquisitionDuration": 288.0 + "AcquisitionDuration": 288.0, + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-beijingGE02/anat/sub-beijingGE02_space-other_T2w.json b/derivatives/data_preprocessed/sub-beijingGE02/anat/sub-beijingGE02_space-other_T2w.json index 996c586d4e..a6912d8f3a 100644 --- a/derivatives/data_preprocessed/sub-beijingGE02/anat/sub-beijingGE02_space-other_T2w.json +++ b/derivatives/data_preprocessed/sub-beijingGE02/anat/sub-beijingGE02_space-other_T2w.json @@ -1,50 +1,54 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 127.768, - "Manufacturer": "GE", - "ManufacturersModelName": "DISCOVERY_MR750", - "InstitutionName": "BeiJing_TIANTAN_Hospital-GX", - "DeviceSerialNumber": "0000082427040165", - "StationName": "GEHCGEHC", - "PatientPosition": "HFS", - "SoftwareVersions": "24_LX_MR_Software_release:DV24.0_R01_1344.a", - "MRAcquisitionType": "3D", - "SeriesDescription": "T2w", - "ProtocolName": "T2w", - "ScanningSequence": "SE", - "SequenceVariant": "SK_OSP", - "ScanOptions": "FC_FREQ_AX_GEMS_FC_NPW_EDR_GEMS_FILTERED_GEMS", + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 127.768, + "Manufacturer": "GE", + "ManufacturersModelName": "DISCOVERY_MR750", + "InstitutionName": "BeiJing_TIANTAN_Hospital-GX", + "DeviceSerialNumber": "0000082427040165", + "StationName": "GEHCGEHC", + "PatientPosition": "HFS", + "SoftwareVersions": "24_LX_MR_Software_release:DV24.0_R01_1344.a", + "MRAcquisitionType": "3D", + "SeriesDescription": "T2w", + "ProtocolName": "T2w", + "ScanningSequence": "SE", + "SequenceVariant": "SK_OSP", + "ScanOptions": "FC_FREQ_AX_GEMS_FC_NPW_EDR_GEMS_FILTERED_GEMS", "ImageType": [ - "ORIGINAL", - "PRIMARY", + "ORIGINAL", + "PRIMARY", "OTHER" - ], - "SeriesNumber": 4, - "AcquisitionTime": "20:22:19.000000", - "AcquisitionNumber": 1, - "SliceThickness": 0.8, - "SpacingBetweenSlices": 0.8, - "SAR": 2.04941, - "EchoTime": 0.124343, - "RepetitionTime": 2.52, - "FlipAngle": 90, - "CoilString": "HDCTL_12", - "PercentPhaseFOV": 100, - "EchoTrainLength": 78, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 256, - "PixelBandwidth": 651.016, + ], + "SeriesNumber": 4, + "AcquisitionTime": "20:22:19.000000", + "AcquisitionNumber": 1, + "SliceThickness": 0.8, + "SpacingBetweenSlices": 0.8, + "SAR": 2.04941, + "EchoTime": 0.124343, + "RepetitionTime": 2.52, + "FlipAngle": 90, + "CoilString": "HDCTL_12", + "PercentPhaseFOV": 100, + "EchoTrainLength": 78, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "PixelBandwidth": 651.016, "ImageOrientationPatientDICOM": [ - 0, - 1, - 0, - -0.0645456, - 0, + 0, + 1, + 0, + -0.0645456, + 0, -0.997915 - ], - "InPlanePhaseEncodingDirectionDICOM": "ROW", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20190902", - "Dcm2bidsVersion": "2.1.4" + ], + "InPlanePhaseEncodingDirectionDICOM": "ROW", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20190902", + "Dcm2bidsVersion": "2.1.4", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-beijingGE03/anat/sub-beijingGE03_space-other_T1w.json b/derivatives/data_preprocessed/sub-beijingGE03/anat/sub-beijingGE03_space-other_T1w.json index b6c540f7cc..01e7cea234 100644 --- a/derivatives/data_preprocessed/sub-beijingGE03/anat/sub-beijingGE03_space-other_T1w.json +++ b/derivatives/data_preprocessed/sub-beijingGE03/anat/sub-beijingGE03_space-other_T1w.json @@ -1,50 +1,54 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 127.768, - "Manufacturer": "GE", - "ManufacturersModelName": "DISCOVERY_MR750", - "InstitutionName": "BeiJing_TIANTAN_Hospital-GX", - "DeviceSerialNumber": "0000082427040165", - "StationName": "GEHCGEHC", - "PatientPosition": "HFS", - "SoftwareVersions": "24_LX_MR_Software_release:DV24.0_R01_1344.a", - "MRAcquisitionType": "3D", - "SeriesDescription": "T1w", - "ProtocolName": "T1w", - "ScanningSequence": "GR", - "SequenceVariant": "SS_SP_SK", - "ScanOptions": "FAST_GEMS_EDR_GEMS_FILTERED_GEMS", + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 127.768, + "Manufacturer": "GE", + "ManufacturersModelName": "DISCOVERY_MR750", + "InstitutionName": "BeiJing_TIANTAN_Hospital-GX", + "DeviceSerialNumber": "0000082427040165", + "StationName": "GEHCGEHC", + "PatientPosition": "HFS", + "SoftwareVersions": "24_LX_MR_Software_release:DV24.0_R01_1344.a", + "MRAcquisitionType": "3D", + "SeriesDescription": "T1w", + "ProtocolName": "T1w", + "ScanningSequence": "GR", + "SequenceVariant": "SS_SP_SK", + "ScanOptions": "FAST_GEMS_EDR_GEMS_FILTERED_GEMS", "ImageType": [ - "ORIGINAL", - "PRIMARY", + "ORIGINAL", + "PRIMARY", "OTHER" - ], - "SeriesNumber": 2, - "AcquisitionTime": "19:15:2.000000", - "AcquisitionNumber": 1, - "SliceThickness": 1, - "SpacingBetweenSlices": 0.500001, - "SAR": 0.489283, - "EchoTime": 0.00176, - "RepetitionTime": 0.004044, - "InversionTime": 1, - "FlipAngle": 9, - "CoilString": "HDCTL_12", - "PercentPhaseFOV": 80, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 512, - "PixelBandwidth": 558.047, + ], + "SeriesNumber": 2, + "AcquisitionTime": "19:15:2.000000", + "AcquisitionNumber": 1, + "SliceThickness": 1, + "SpacingBetweenSlices": 0.500001, + "SAR": 0.489283, + "EchoTime": 0.00176, + "RepetitionTime": 0.004044, + "InversionTime": 1, + "FlipAngle": 9, + "CoilString": "HDCTL_12", + "PercentPhaseFOV": 80, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 512, + "PixelBandwidth": 558.047, "ImageOrientationPatientDICOM": [ - 0, - 1, - 0, - 0.0272489, - 0, + 0, + 1, + 0, + 0.0272489, + 0, -0.999629 - ], - "InPlanePhaseEncodingDirectionDICOM": "ROW", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20190902", - "Dcm2bidsVersion": "2.1.4" + ], + "InPlanePhaseEncodingDirectionDICOM": "ROW", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20190902", + "Dcm2bidsVersion": "2.1.4", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-beijingGE03/anat/sub-beijingGE03_space-other_T2star.json b/derivatives/data_preprocessed/sub-beijingGE03/anat/sub-beijingGE03_space-other_T2star.json index 0cf57a7d3d..7abc1b60c7 100644 --- a/derivatives/data_preprocessed/sub-beijingGE03/anat/sub-beijingGE03_space-other_T2star.json +++ b/derivatives/data_preprocessed/sub-beijingGE03/anat/sub-beijingGE03_space-other_T2star.json @@ -67,5 +67,9 @@ "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20190902", "Dcm2bidsVersion": "2.1.4", - "AcquisitionDuration": 288.0 + "AcquisitionDuration": 288.0, + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-beijingGE03/anat/sub-beijingGE03_space-other_T2w.json b/derivatives/data_preprocessed/sub-beijingGE03/anat/sub-beijingGE03_space-other_T2w.json index 8e459caaf7..06f96dd926 100644 --- a/derivatives/data_preprocessed/sub-beijingGE03/anat/sub-beijingGE03_space-other_T2w.json +++ b/derivatives/data_preprocessed/sub-beijingGE03/anat/sub-beijingGE03_space-other_T2w.json @@ -1,50 +1,54 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 127.768, - "Manufacturer": "GE", - "ManufacturersModelName": "DISCOVERY_MR750", - "InstitutionName": "BeiJing_TIANTAN_Hospital-GX", - "DeviceSerialNumber": "0000082427040165", - "StationName": "GEHCGEHC", - "PatientPosition": "HFS", - "SoftwareVersions": "24_LX_MR_Software_release:DV24.0_R01_1344.a", - "MRAcquisitionType": "3D", - "SeriesDescription": "T2w", - "ProtocolName": "T2w", - "ScanningSequence": "SE", - "SequenceVariant": "SK_OSP", - "ScanOptions": "FC_FREQ_AX_GEMS_FC_NPW_EDR_GEMS_FILTERED_GEMS", + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 127.768, + "Manufacturer": "GE", + "ManufacturersModelName": "DISCOVERY_MR750", + "InstitutionName": "BeiJing_TIANTAN_Hospital-GX", + "DeviceSerialNumber": "0000082427040165", + "StationName": "GEHCGEHC", + "PatientPosition": "HFS", + "SoftwareVersions": "24_LX_MR_Software_release:DV24.0_R01_1344.a", + "MRAcquisitionType": "3D", + "SeriesDescription": "T2w", + "ProtocolName": "T2w", + "ScanningSequence": "SE", + "SequenceVariant": "SK_OSP", + "ScanOptions": "FC_FREQ_AX_GEMS_FC_NPW_EDR_GEMS_FILTERED_GEMS", "ImageType": [ - "ORIGINAL", - "PRIMARY", + "ORIGINAL", + "PRIMARY", "OTHER" - ], - "SeriesNumber": 4, - "AcquisitionTime": "19:29:53.000000", - "AcquisitionNumber": 1, - "SliceThickness": 0.8, - "SpacingBetweenSlices": 0.8, - "SAR": 1.87344, - "EchoTime": 0.122282, - "RepetitionTime": 2.52, - "FlipAngle": 90, - "CoilString": "HDCTL_12", - "PercentPhaseFOV": 100, - "EchoTrainLength": 78, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 256, - "PixelBandwidth": 651.016, + ], + "SeriesNumber": 4, + "AcquisitionTime": "19:29:53.000000", + "AcquisitionNumber": 1, + "SliceThickness": 0.8, + "SpacingBetweenSlices": 0.8, + "SAR": 1.87344, + "EchoTime": 0.122282, + "RepetitionTime": 2.52, + "FlipAngle": 90, + "CoilString": "HDCTL_12", + "PercentPhaseFOV": 100, + "EchoTrainLength": 78, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "PixelBandwidth": 651.016, "ImageOrientationPatientDICOM": [ - 0, - 1, - 0, - 0.0325058, - 0, + 0, + 1, + 0, + 0.0325058, + 0, -0.999472 - ], - "InPlanePhaseEncodingDirectionDICOM": "ROW", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20190902", - "Dcm2bidsVersion": "2.1.4" + ], + "InPlanePhaseEncodingDirectionDICOM": "ROW", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20190902", + "Dcm2bidsVersion": "2.1.4", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-beijingGE04/anat/sub-beijingGE04_space-other_T1w.json b/derivatives/data_preprocessed/sub-beijingGE04/anat/sub-beijingGE04_space-other_T1w.json index 5e38e44098..5c405fbe15 100644 --- a/derivatives/data_preprocessed/sub-beijingGE04/anat/sub-beijingGE04_space-other_T1w.json +++ b/derivatives/data_preprocessed/sub-beijingGE04/anat/sub-beijingGE04_space-other_T1w.json @@ -1,50 +1,54 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 127.768, - "Manufacturer": "GE", - "ManufacturersModelName": "DISCOVERY_MR750", - "InstitutionName": "BeiJing_TIANTAN_Hospital-GX", - "DeviceSerialNumber": "0000082427040165", - "StationName": "GEHCGEHC", - "PatientPosition": "HFS", - "SoftwareVersions": "24_LX_MR_Software_release:DV24.0_R01_1344.a", - "MRAcquisitionType": "3D", - "SeriesDescription": "T1w", - "ProtocolName": "T1w", - "ScanningSequence": "GR", - "SequenceVariant": "SS_SP_SK", - "ScanOptions": "FAST_GEMS_EDR_GEMS_FILTERED_GEMS", + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 127.768, + "Manufacturer": "GE", + "ManufacturersModelName": "DISCOVERY_MR750", + "InstitutionName": "BeiJing_TIANTAN_Hospital-GX", + "DeviceSerialNumber": "0000082427040165", + "StationName": "GEHCGEHC", + "PatientPosition": "HFS", + "SoftwareVersions": "24_LX_MR_Software_release:DV24.0_R01_1344.a", + "MRAcquisitionType": "3D", + "SeriesDescription": "T1w", + "ProtocolName": "T1w", + "ScanningSequence": "GR", + "SequenceVariant": "SS_SP_SK", + "ScanOptions": "FAST_GEMS_EDR_GEMS_FILTERED_GEMS", "ImageType": [ - "ORIGINAL", - "PRIMARY", + "ORIGINAL", + "PRIMARY", "OTHER" - ], - "SeriesNumber": 2, - "AcquisitionTime": "18:32:20.000000", - "AcquisitionNumber": 1, - "SliceThickness": 1, - "SpacingBetweenSlices": 0.500001, - "SAR": 0.497997, - "EchoTime": 0.00176, - "RepetitionTime": 0.004044, - 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a/derivatives/data_preprocessed/sub-beijingGE04/anat/sub-beijingGE04_space-other_T2w.json b/derivatives/data_preprocessed/sub-beijingGE04/anat/sub-beijingGE04_space-other_T2w.json index 9cac37ab4b..c643862a16 100644 --- a/derivatives/data_preprocessed/sub-beijingGE04/anat/sub-beijingGE04_space-other_T2w.json +++ b/derivatives/data_preprocessed/sub-beijingGE04/anat/sub-beijingGE04_space-other_T2w.json @@ -1,50 +1,54 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 127.768, - "Manufacturer": "GE", - "ManufacturersModelName": "DISCOVERY_MR750", - "InstitutionName": "BeiJing_TIANTAN_Hospital-GX", - "DeviceSerialNumber": "0000082427040165", - "StationName": "GEHCGEHC", - "PatientPosition": "HFS", - "SoftwareVersions": "24_LX_MR_Software_release:DV24.0_R01_1344.a", - "MRAcquisitionType": "3D", - "SeriesDescription": "T2w", - "ProtocolName": "T2w", - "ScanningSequence": "SE", - "SequenceVariant": "SK_OSP", - "ScanOptions": "FC_FREQ_AX_GEMS_FC_NPW_EDR_GEMS_FILTERED_GEMS", + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 127.768, + "Manufacturer": "GE", + "ManufacturersModelName": "DISCOVERY_MR750", + "InstitutionName": "BeiJing_TIANTAN_Hospital-GX", + "DeviceSerialNumber": "0000082427040165", + "StationName": "GEHCGEHC", + "PatientPosition": "HFS", + "SoftwareVersions": "24_LX_MR_Software_release:DV24.0_R01_1344.a", + "MRAcquisitionType": "3D", + "SeriesDescription": "T2w", + "ProtocolName": "T2w", + "ScanningSequence": "SE", + "SequenceVariant": "SK_OSP", + "ScanOptions": "FC_FREQ_AX_GEMS_FC_NPW_EDR_GEMS_FILTERED_GEMS", "ImageType": [ - "ORIGINAL", - "PRIMARY", + "ORIGINAL", + "PRIMARY", "OTHER" - ], - "SeriesNumber": 3, - "AcquisitionTime": "18:42:18.000000", - "AcquisitionNumber": 1, - "SliceThickness": 0.8, - "SpacingBetweenSlices": 0.8, - "SAR": 1.78995, - "EchoTime": 0.124131, - "RepetitionTime": 2.52, - "FlipAngle": 90, - "CoilString": "HDCTL_12", - "PercentPhaseFOV": 100, - 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"SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-beijingPrisma01/anat/sub-beijingPrisma01_flip-1_mt-on_space-other_MTS.json b/derivatives/data_preprocessed/sub-beijingPrisma01/anat/sub-beijingPrisma01_flip-1_mt-on_space-other_MTS.json index 432d6ff7cf..f305b5541d 100644 --- a/derivatives/data_preprocessed/sub-beijingPrisma01/anat/sub-beijingPrisma01_flip-1_mt-on_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-beijingPrisma01/anat/sub-beijingPrisma01_flip-1_mt-on_space-other_MTS.json @@ -1,76 +1,79 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.254, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma", - "InstitutionName": "Beijing_Tiantan_Hospital", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "Street_StreetNo_Beijing_Fengtai_CN_ZIP", - "DeviceSerialNumber": "166118", - "StationName": 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(JP-LS:CharLS) Clang8.1.0", - "Dcm2bidsVersion": "2.1.4" + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20190410 (JP2:OpenJPEG) (JP-LS:CharLS) Clang8.1.0", + "Dcm2bidsVersion": "2.1.4", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-beijingPrisma01/anat/sub-beijingPrisma01_flip-2_mt-off_space-other_MTS.json b/derivatives/data_preprocessed/sub-beijingPrisma01/anat/sub-beijingPrisma01_flip-2_mt-off_space-other_MTS.json index bb68434299..fb1f4be6ca 100644 --- a/derivatives/data_preprocessed/sub-beijingPrisma01/anat/sub-beijingPrisma01_flip-2_mt-off_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-beijingPrisma01/anat/sub-beijingPrisma01_flip-2_mt-off_space-other_MTS.json @@ -1,75 +1,78 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.254, - "Manufacturer": "Siemens", - 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at end of file diff --git a/derivatives/data_preprocessed/sub-beijingPrisma02/anat/sub-beijingPrisma02_flip-1_mt-on_space-other_MTS.json b/derivatives/data_preprocessed/sub-beijingPrisma02/anat/sub-beijingPrisma02_flip-1_mt-on_space-other_MTS.json index 51d2ce16f1..cd571c6782 100644 --- a/derivatives/data_preprocessed/sub-beijingPrisma02/anat/sub-beijingPrisma02_flip-1_mt-on_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-beijingPrisma02/anat/sub-beijingPrisma02_flip-1_mt-on_space-other_MTS.json @@ -1,77 +1,80 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.254, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma", - "InstitutionName": "Beijing_Tiantan_Hospital", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "Street_StreetNo_Beijing_Fengtai_CN_ZIP", - "DeviceSerialNumber": "166118", - "StationName": "AWP166118", - "BodyPartExamined": "CTSPINE", - "PatientPosition": "HFS", - "ProcedureStepDescription": 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"InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20190902", - "Dcm2bidsVersion": "2.1.4" + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20190902", + "Dcm2bidsVersion": "2.1.4", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-beijingPrisma02/anat/sub-beijingPrisma02_space-other_T1w.json b/derivatives/data_preprocessed/sub-beijingPrisma02/anat/sub-beijingPrisma02_space-other_T1w.json index c1d613589f..e51e19b667 100644 --- a/derivatives/data_preprocessed/sub-beijingPrisma02/anat/sub-beijingPrisma02_space-other_T1w.json +++ b/derivatives/data_preprocessed/sub-beijingPrisma02/anat/sub-beijingPrisma02_space-other_T1w.json @@ -1,79 +1,83 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.254, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma", - "InstitutionName": "Beijing_Tiantan_Hospital", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "Street_StreetNo_Beijing_Fengtai_CN_ZIP", - "DeviceSerialNumber": "166118", - "StationName": "AWP166118", - "BodyPartExamined": "CTSPINE", - "PatientPosition": "HFS", - "ProcedureStepDescription": "Research_Research", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "T1w", - "ProtocolName": "T1w", - "ScanningSequence": "GR_IR", - "SequenceVariant": "SK_SP_MP", - "ScanOptions": "IR", - "SequenceName": "_tfl3d1_16", + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 123.254, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma", + "InstitutionName": "Beijing_Tiantan_Hospital", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "Street_StreetNo_Beijing_Fengtai_CN_ZIP", + "DeviceSerialNumber": "166118", + "StationName": "AWP166118", + 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260, + "ReconMatrixPE": 260, + "ParallelReductionFactorInPlane": 2, + "PixelBandwidth": 150, + "DwellTime": 1.04e-05, "ImageOrientationPatientDICOM": [ - 0, - 1, - 0, - 0, - 0, + 0, + 1, + 0, + 0, + 0, -1 - ], - "InPlanePhaseEncodingDirectionDICOM": "ROW", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20190902", - "Dcm2bidsVersion": "2.1.4" + ], + "InPlanePhaseEncodingDirectionDICOM": "ROW", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20190902", + "Dcm2bidsVersion": "2.1.4", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-beijingPrisma02/anat/sub-beijingPrisma02_space-other_T2star.json b/derivatives/data_preprocessed/sub-beijingPrisma02/anat/sub-beijingPrisma02_space-other_T2star.json index 2c078c57df..fdf590fe4a 100644 --- a/derivatives/data_preprocessed/sub-beijingPrisma02/anat/sub-beijingPrisma02_space-other_T2star.json +++ b/derivatives/data_preprocessed/sub-beijingPrisma02/anat/sub-beijingPrisma02_space-other_T2star.json @@ -95,5 +95,9 @@ "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20190902", "Dcm2bidsVersion": "2.1.4", - "AcquisitionDuration": 285.0 + "AcquisitionDuration": 285.0, + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-beijingPrisma02/anat/sub-beijingPrisma02_space-other_T2w.json b/derivatives/data_preprocessed/sub-beijingPrisma02/anat/sub-beijingPrisma02_space-other_T2w.json index 5717c3b13a..0418d646d3 100644 --- a/derivatives/data_preprocessed/sub-beijingPrisma02/anat/sub-beijingPrisma02_space-other_T2w.json +++ b/derivatives/data_preprocessed/sub-beijingPrisma02/anat/sub-beijingPrisma02_space-other_T2w.json @@ -1,81 +1,85 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.254, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma", - "InstitutionName": "Beijing_Tiantan_Hospital", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "Street_StreetNo_Beijing_Fengtai_CN_ZIP", - "DeviceSerialNumber": "166118", - "StationName": "AWP166118", - "BodyPartExamined": "CTSPINE", - "PatientPosition": "HFS", - "ProcedureStepDescription": "Research_Research", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "T2w", - "ProtocolName": "T2w", - "ScanningSequence": "SE", - "SequenceVariant": "SK_SP_OSP", - "ScanOptions": "PFP", - "SequenceName": "_spcR_100", + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 123.254, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma", + "InstitutionName": "Beijing_Tiantan_Hospital", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "Street_StreetNo_Beijing_Fengtai_CN_ZIP", + "DeviceSerialNumber": "166118", + "StationName": "AWP166118", + "BodyPartExamined": "CTSPINE", + "PatientPosition": "HFS", + "ProcedureStepDescription": "Research_Research", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "T2w", + "ProtocolName": "T2w", + "ScanningSequence": "SE", + "SequenceVariant": "SK_SP_OSP", + "ScanOptions": "PFP", + "SequenceName": "_spcR_100", "ImageType": [ - "ORIGINAL", - "PRIMARY", - "M", - "NORM", - "DIS3D", + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS3D", "DIS2D" - ], - "SeriesNumber": 3, - "AcquisitionTime": "19:45:27.967500", - "AcquisitionNumber": 1, - "SliceThickness": 0.8, - "SAR": 0.411571, - "NumberOfAverages": 2, - "EchoTime": 0.12, - "RepetitionTime": 1.5, - "FlipAngle": 120, - "PartialFourier": 1, - "BaseResolution": 320, + ], + "SeriesNumber": 3, + "AcquisitionTime": "19:45:27.967500", + "AcquisitionNumber": 1, + "SliceThickness": 0.8, + "SAR": 0.411571, + "NumberOfAverages": 2, + "EchoTime": 0.12, + "RepetitionTime": 1.5, + "FlipAngle": 120, + "PartialFourier": 1, + "BaseResolution": 320, "ShimSetting": [ - 2116, - -11638, - -5938, - -320, - 59, - -54, - 669, + 2116, + -11638, + -5938, + -320, + 59, + -54, + 669, 1 - ], - "TxRefAmp": 263.178, - "PhaseResolution": 1, - "PhaseOversampling": 0.8, - "ReceiveCoilName": "Spine_32", - "ReceiveCoilActiveElements": "HC3-7;NC1,2;SP1", - "CoilString": "HC3-7;NC1_2;SP1", - "PulseSequenceDetails": "%SiemensSeq%_tse_vfl", - "RefLinesPE": 32, - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 100, - "EchoTrainLength": 76, - "PhaseEncodingSteps": 422, - "AcquisitionMatrixPE": 320, - "ReconMatrixPE": 320, - "ParallelReductionFactorInPlane": 3, - "PixelBandwidth": 625, - "DwellTime": 2.5e-06, + ], + "TxRefAmp": 263.178, + "PhaseResolution": 1, + "PhaseOversampling": 0.8, + "ReceiveCoilName": "Spine_32", + "ReceiveCoilActiveElements": "HC3-7;NC1,2;SP1", + "CoilString": "HC3-7;NC1_2;SP1", + "PulseSequenceDetails": "%SiemensSeq%_tse_vfl", + "RefLinesPE": 32, + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "EchoTrainLength": 76, + "PhaseEncodingSteps": 422, + "AcquisitionMatrixPE": 320, + "ReconMatrixPE": 320, + "ParallelReductionFactorInPlane": 3, + "PixelBandwidth": 625, + "DwellTime": 2.5e-06, "ImageOrientationPatientDICOM": [ - 0, - 1, - 0, - 0, - 0, + 0, + 1, + 0, + 0, + 0, -1 - ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20190902", - "Dcm2bidsVersion": "2.1.4" + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20190902", + "Dcm2bidsVersion": "2.1.4", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-beijingPrisma03/anat/sub-beijingPrisma03_flip-1_mt-on_space-other_MTS.json b/derivatives/data_preprocessed/sub-beijingPrisma03/anat/sub-beijingPrisma03_flip-1_mt-on_space-other_MTS.json index e7cafcc016..e39edb1e4f 100644 --- a/derivatives/data_preprocessed/sub-beijingPrisma03/anat/sub-beijingPrisma03_flip-1_mt-on_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-beijingPrisma03/anat/sub-beijingPrisma03_flip-1_mt-on_space-other_MTS.json @@ -1,77 +1,80 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.254, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma", - "InstitutionName": "Beijing_Tiantan_Hospital", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "Street_StreetNo_Beijing_Fengtai_CN_ZIP", - "DeviceSerialNumber": "166118", - "StationName": "AWP166118", - "BodyPartExamined": "CTSPINE", - "PatientPosition": "HFS", - "ProcedureStepDescription": "Research_Research", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-MT1", - "ProtocolName": "GRE-MT1", - "ScanningSequence": "GR", - "SequenceVariant": "MTC_SP", - "ScanOptions": "MT", - "SequenceName": "_fl3d1", + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 123.254, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma", + "InstitutionName": "Beijing_Tiantan_Hospital", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "Street_StreetNo_Beijing_Fengtai_CN_ZIP", + "DeviceSerialNumber": "166118", + "StationName": "AWP166118", + "BodyPartExamined": "CTSPINE", + "PatientPosition": "HFS", + "ProcedureStepDescription": "Research_Research", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-MT1", + "ProtocolName": "GRE-MT1", + "ScanningSequence": "GR", + "SequenceVariant": "MTC_SP", + "ScanOptions": "MT", + "SequenceName": "_fl3d1", "ImageType": [ - "ORIGINAL", - "PRIMARY", - "M", - "NORM", + "ORIGINAL", + "PRIMARY", + "M", + "NORM", "DIS2D" - ], - "SeriesNumber": 4, - "AcquisitionTime": "18:31:14.915000", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SAR": 0.552634, - "EchoTime": 0.00313, - "RepetitionTime": 0.035, - "FlipAngle": 9, - "PartialFourier": 1, - "BaseResolution": 256, + ], + "SeriesNumber": 4, + "AcquisitionTime": "18:31:14.915000", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SAR": 0.552634, + "EchoTime": 0.00313, + "RepetitionTime": 0.035, + "FlipAngle": 9, + "PartialFourier": 1, + "BaseResolution": 256, "ShimSetting": [ - 2101, - -11941, - -5762, - 117, - -1, - 1686, - -264, + 2101, + -11941, + -5762, + 117, + -1, + 1686, + -264, -39 - ], - "TxRefAmp": 289.183, - "PhaseResolution": 1, - "ReceiveCoilName": "Spine_32", - "ReceiveCoilActiveElements": "HC7;NC1,2;SP1", - "CoilString": "HC7;NC1_2;SP1", - "PulseSequenceDetails": "%SiemensSeq%_gre", - "RefLinesPE": 32, - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 100, - "PhaseEncodingSteps": 255, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 256, - "ParallelReductionFactorInPlane": 2, - "PixelBandwidth": 260, - "DwellTime": 7.5e-06, + ], + "TxRefAmp": 289.183, + "PhaseResolution": 1, + "ReceiveCoilName": "Spine_32", + "ReceiveCoilActiveElements": "HC7;NC1,2;SP1", + "CoilString": "HC7;NC1_2;SP1", + "PulseSequenceDetails": "%SiemensSeq%_gre", + "RefLinesPE": 32, + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 255, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "ParallelReductionFactorInPlane": 2, + "PixelBandwidth": 260, + "DwellTime": 7.5e-06, "ImageOrientationPatientDICOM": [ - 1, - 0, - 0, - 0, - 1, + 1, + 0, + 0, + 0, + 1, 0 - ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20190902", - "Dcm2bidsVersion": "2.1.4" + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20190902", + "Dcm2bidsVersion": "2.1.4", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-beijingPrisma03/anat/sub-beijingPrisma03_flip-2_mt-off_space-other_MTS.json b/derivatives/data_preprocessed/sub-beijingPrisma03/anat/sub-beijingPrisma03_flip-2_mt-off_space-other_MTS.json index 396d68618e..70559af075 100644 --- a/derivatives/data_preprocessed/sub-beijingPrisma03/anat/sub-beijingPrisma03_flip-2_mt-off_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-beijingPrisma03/anat/sub-beijingPrisma03_flip-2_mt-off_space-other_MTS.json @@ -1,76 +1,79 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.254, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma", - "InstitutionName": "Beijing_Tiantan_Hospital", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "Street_StreetNo_Beijing_Fengtai_CN_ZIP", - "DeviceSerialNumber": "166118", - "StationName": "AWP166118", - "BodyPartExamined": "CTSPINE", - "PatientPosition": "HFS", - "ProcedureStepDescription": "Research_Research", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-T1w", - "ProtocolName": "GRE-T1w", - "ScanningSequence": "GR", - "SequenceVariant": "SP", - "SequenceName": "_fl3d1", + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 123.254, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma", + "InstitutionName": "Beijing_Tiantan_Hospital", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "Street_StreetNo_Beijing_Fengtai_CN_ZIP", + "DeviceSerialNumber": "166118", + "StationName": "AWP166118", + "BodyPartExamined": "CTSPINE", + "PatientPosition": "HFS", + "ProcedureStepDescription": "Research_Research", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-T1w", + "ProtocolName": "GRE-T1w", + "ScanningSequence": "GR", + "SequenceVariant": "SP", + "SequenceName": "_fl3d1", "ImageType": [ - "ORIGINAL", - "PRIMARY", - "M", - "NORM", + "ORIGINAL", + "PRIMARY", + "M", + "NORM", "DIS2D" - ], - "SeriesNumber": 6, - "AcquisitionTime": "18:39:37.562500", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SAR": 0.0358311, - "EchoTime": 0.00313, - "RepetitionTime": 0.015, - "FlipAngle": 15, - "PartialFourier": 1, - "BaseResolution": 256, + ], + "SeriesNumber": 6, + "AcquisitionTime": "18:39:37.562500", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SAR": 0.0358311, + "EchoTime": 0.00313, + "RepetitionTime": 0.015, + "FlipAngle": 15, + "PartialFourier": 1, + "BaseResolution": 256, "ShimSetting": [ - 2101, - -11941, - -5762, - 117, - -1, - 1686, - -264, + 2101, + -11941, + -5762, + 117, + -1, + 1686, + -264, -39 - ], - "TxRefAmp": 289.183, - "PhaseResolution": 1, - "ReceiveCoilName": "Spine_32", - "ReceiveCoilActiveElements": "HC7;NC1,2;SP1", - "CoilString": "HC7;NC1_2;SP1", - "PulseSequenceDetails": "%SiemensSeq%_gre", - "RefLinesPE": 32, - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 100, - "PhaseEncodingSteps": 255, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 256, - "ParallelReductionFactorInPlane": 2, - "PixelBandwidth": 260, - "DwellTime": 7.5e-06, + ], + "TxRefAmp": 289.183, + "PhaseResolution": 1, + "ReceiveCoilName": "Spine_32", + "ReceiveCoilActiveElements": "HC7;NC1,2;SP1", + "CoilString": "HC7;NC1_2;SP1", + "PulseSequenceDetails": "%SiemensSeq%_gre", + "RefLinesPE": 32, + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 255, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "ParallelReductionFactorInPlane": 2, + "PixelBandwidth": 260, + "DwellTime": 7.5e-06, "ImageOrientationPatientDICOM": [ - 1, - 0, - 0, - 0, - 1, + 1, + 0, + 0, + 0, + 1, 0 - ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20190902", - "Dcm2bidsVersion": "2.1.4" + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20190902", + "Dcm2bidsVersion": "2.1.4", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-beijingPrisma03/anat/sub-beijingPrisma03_space-other_T1w.json b/derivatives/data_preprocessed/sub-beijingPrisma03/anat/sub-beijingPrisma03_space-other_T1w.json index a58f1a9f54..d6e9248570 100644 --- a/derivatives/data_preprocessed/sub-beijingPrisma03/anat/sub-beijingPrisma03_space-other_T1w.json +++ b/derivatives/data_preprocessed/sub-beijingPrisma03/anat/sub-beijingPrisma03_space-other_T1w.json @@ -1,79 +1,83 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.254, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma", - "InstitutionName": "Beijing_Tiantan_Hospital", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "Street_StreetNo_Beijing_Fengtai_CN_ZIP", - "DeviceSerialNumber": "166118", - "StationName": "AWP166118", - "BodyPartExamined": "CTSPINE", - "PatientPosition": "HFS", - "ProcedureStepDescription": "Research_Research", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "T1w", - "ProtocolName": "T1w", - "ScanningSequence": "GR_IR", - "SequenceVariant": "SK_SP_MP", - "ScanOptions": "IR", - "SequenceName": "_tfl3d1_16", + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 123.254, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma", + "InstitutionName": "Beijing_Tiantan_Hospital", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "Street_StreetNo_Beijing_Fengtai_CN_ZIP", + "DeviceSerialNumber": "166118", + "StationName": "AWP166118", + "BodyPartExamined": "CTSPINE", + "PatientPosition": "HFS", + "ProcedureStepDescription": "Research_Research", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "T1w", + "ProtocolName": "T1w", + "ScanningSequence": "GR_IR", + "SequenceVariant": "SK_SP_MP", + "ScanOptions": "IR", + "SequenceName": "_tfl3d1_16", "ImageType": [ - "ORIGINAL", - "PRIMARY", - "M", - "NORM", - "DIS3D", + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS3D", "DIS2D" - ], - "SeriesNumber": 2, - "AcquisitionTime": "18:19:43.022500", - "AcquisitionNumber": 1, - "SliceThickness": 1, - "SAR": 0.0751128, - "EchoTime": 0.00372, - "RepetitionTime": 2, - "InversionTime": 1, - "FlipAngle": 9, - "PartialFourier": 1, - "BaseResolution": 320, + ], + "SeriesNumber": 2, + "AcquisitionTime": "18:19:43.022500", + "AcquisitionNumber": 1, + "SliceThickness": 1, + "SAR": 0.0751128, + "EchoTime": 0.00372, + "RepetitionTime": 2, + "InversionTime": 1, + "FlipAngle": 9, + "PartialFourier": 1, + "BaseResolution": 320, "ShimSetting": [ - 2074, - -11701, - -5703, - 155, - -62, - -229, - -195, + 2074, + -11701, + -5703, + 155, + -62, + -229, + -195, -17 - ], - "TxRefAmp": 289.183, - "PhaseResolution": 1, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC5-7;NC1,2;SP1", - "CoilString": "HC5-7;NC1_2;SP1", - "PulseSequenceDetails": "%SiemensSeq%_tfl", - "RefLinesPE": 24, - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 81.25, - "PhaseEncodingSteps": 259, - "AcquisitionMatrixPE": 260, - "ReconMatrixPE": 260, - "ParallelReductionFactorInPlane": 2, - "PixelBandwidth": 150, - "DwellTime": 1.04e-05, + ], + "TxRefAmp": 289.183, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC5-7;NC1,2;SP1", + "CoilString": "HC5-7;NC1_2;SP1", + "PulseSequenceDetails": "%SiemensSeq%_tfl", + "RefLinesPE": 24, + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 81.25, + "PhaseEncodingSteps": 259, + "AcquisitionMatrixPE": 260, + "ReconMatrixPE": 260, + "ParallelReductionFactorInPlane": 2, + "PixelBandwidth": 150, + "DwellTime": 1.04e-05, "ImageOrientationPatientDICOM": [ - 0, - 1, - 0, - 0, - 0, + 0, + 1, + 0, + 0, + 0, -1 - ], - "InPlanePhaseEncodingDirectionDICOM": "ROW", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20190902", - "Dcm2bidsVersion": "2.1.4" + ], + "InPlanePhaseEncodingDirectionDICOM": "ROW", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20190902", + "Dcm2bidsVersion": "2.1.4", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-beijingPrisma03/anat/sub-beijingPrisma03_space-other_T2star.json b/derivatives/data_preprocessed/sub-beijingPrisma03/anat/sub-beijingPrisma03_space-other_T2star.json index 8e9a0dcbbe..b32d6628ac 100644 --- a/derivatives/data_preprocessed/sub-beijingPrisma03/anat/sub-beijingPrisma03_space-other_T2star.json +++ b/derivatives/data_preprocessed/sub-beijingPrisma03/anat/sub-beijingPrisma03_space-other_T2star.json @@ -95,5 +95,9 @@ "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20190902", "Dcm2bidsVersion": "2.1.4", - "AcquisitionDuration": 285.0 + "AcquisitionDuration": 285.0, + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-beijingPrisma03/anat/sub-beijingPrisma03_space-other_T2w.json b/derivatives/data_preprocessed/sub-beijingPrisma03/anat/sub-beijingPrisma03_space-other_T2w.json index 2a1d709ab8..1c2a0ce39f 100644 --- a/derivatives/data_preprocessed/sub-beijingPrisma03/anat/sub-beijingPrisma03_space-other_T2w.json +++ b/derivatives/data_preprocessed/sub-beijingPrisma03/anat/sub-beijingPrisma03_space-other_T2w.json @@ -1,81 +1,85 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.254, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma", - "InstitutionName": "Beijing_Tiantan_Hospital", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "Street_StreetNo_Beijing_Fengtai_CN_ZIP", - "DeviceSerialNumber": "166118", - "StationName": "AWP166118", - "BodyPartExamined": "CTSPINE", - "PatientPosition": "HFS", - "ProcedureStepDescription": "Research_Research", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "T2w", - "ProtocolName": "T2w", - "ScanningSequence": "SE", - "SequenceVariant": "SK_SP_OSP", - "ScanOptions": "PFP", - "SequenceName": "_spcR_100", + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 123.254, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma", + "InstitutionName": "Beijing_Tiantan_Hospital", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "Street_StreetNo_Beijing_Fengtai_CN_ZIP", + "DeviceSerialNumber": "166118", + 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"RefLinesPE": 32, + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "EchoTrainLength": 76, + "PhaseEncodingSteps": 422, + "AcquisitionMatrixPE": 320, + "ReconMatrixPE": 320, + "ParallelReductionFactorInPlane": 3, + "PixelBandwidth": 625, + "DwellTime": 2.5e-06, "ImageOrientationPatientDICOM": [ - 0, - 1, - 0, - 0, - 0, + 0, + 1, + 0, + 0, + 0, -1 - ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20190902", - "Dcm2bidsVersion": "2.1.4" + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20190902", + "Dcm2bidsVersion": "2.1.4", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-beijingPrisma04/anat/sub-beijingPrisma04_flip-1_mt-on_space-other_MTS.json b/derivatives/data_preprocessed/sub-beijingPrisma04/anat/sub-beijingPrisma04_flip-1_mt-on_space-other_MTS.json index 03dfa12b08..3b45dd29cb 100644 --- a/derivatives/data_preprocessed/sub-beijingPrisma04/anat/sub-beijingPrisma04_flip-1_mt-on_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-beijingPrisma04/anat/sub-beijingPrisma04_flip-1_mt-on_space-other_MTS.json @@ -1,77 +1,80 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.254, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma", - "InstitutionName": "Beijing_Tiantan_Hospital", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "Street_StreetNo_Beijing_Fengtai_CN_ZIP", - "DeviceSerialNumber": "166118", - "StationName": "AWP166118", - "BodyPartExamined": "CTSPINE", - "PatientPosition": "HFS", - "ProcedureStepDescription": "Research_Research", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-MT1", - "ProtocolName": "GRE-MT1", - "ScanningSequence": "GR", - "SequenceVariant": "MTC_SP", - "ScanOptions": "MT", - "SequenceName": "_fl3d1", + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 123.254, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma", + "InstitutionName": "Beijing_Tiantan_Hospital", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "Street_StreetNo_Beijing_Fengtai_CN_ZIP", + "DeviceSerialNumber": "166118", + "StationName": "AWP166118", + "BodyPartExamined": "CTSPINE", + "PatientPosition": "HFS", + "ProcedureStepDescription": "Research_Research", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-MT1", + "ProtocolName": "GRE-MT1", + "ScanningSequence": "GR", + "SequenceVariant": "MTC_SP", + "ScanOptions": "MT", + "SequenceName": "_fl3d1", "ImageType": [ - "ORIGINAL", - "PRIMARY", - "M", - "NORM", + "ORIGINAL", + "PRIMARY", + "M", + "NORM", "DIS2D" - ], - "SeriesNumber": 4, - "AcquisitionTime": "17:59:33.250000", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SAR": 0.484911, - "EchoTime": 0.00313, - "RepetitionTime": 0.035, - "FlipAngle": 9, - "PartialFourier": 1, - "BaseResolution": 256, + ], + "SeriesNumber": 4, + "AcquisitionTime": "17:59:33.250000", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SAR": 0.484911, + "EchoTime": 0.00313, + "RepetitionTime": 0.035, + "FlipAngle": 9, + "PartialFourier": 1, + "BaseResolution": 256, "ShimSetting": [ - 2126, - -11521, - -6004, - -218, - -8, - 1100, - -388, + 2126, + -11521, + -6004, + -218, + -8, + 1100, + -388, 39 - ], - "TxRefAmp": 283.986, - "PhaseResolution": 1, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC7;NC1,2", - "CoilString": "HC7;NC1_2", - "PulseSequenceDetails": "%SiemensSeq%_gre", - "RefLinesPE": 32, - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 100, - "PhaseEncodingSteps": 255, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 256, - "ParallelReductionFactorInPlane": 2, - "PixelBandwidth": 260, - "DwellTime": 7.5e-06, + ], + "TxRefAmp": 283.986, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC7;NC1,2", + "CoilString": "HC7;NC1_2", + "PulseSequenceDetails": "%SiemensSeq%_gre", + "RefLinesPE": 32, + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 255, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "ParallelReductionFactorInPlane": 2, + "PixelBandwidth": 260, + "DwellTime": 7.5e-06, "ImageOrientationPatientDICOM": [ - 1, - 0, - 0, - 0, - 0.982287, + 1, + 0, + 0, + 0, + 0.982287, 0.187381 - ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20190902", - "Dcm2bidsVersion": "2.1.4" + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20190902", + "Dcm2bidsVersion": "2.1.4", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-beijingPrisma04/anat/sub-beijingPrisma04_flip-2_mt-off_space-other_MTS.json b/derivatives/data_preprocessed/sub-beijingPrisma04/anat/sub-beijingPrisma04_flip-2_mt-off_space-other_MTS.json index 78c6730f98..382fcfc935 100644 --- a/derivatives/data_preprocessed/sub-beijingPrisma04/anat/sub-beijingPrisma04_flip-2_mt-off_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-beijingPrisma04/anat/sub-beijingPrisma04_flip-2_mt-off_space-other_MTS.json @@ -1,76 +1,79 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.254, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma", - "InstitutionName": "Beijing_Tiantan_Hospital", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "Street_StreetNo_Beijing_Fengtai_CN_ZIP", - "DeviceSerialNumber": "166118", - "StationName": "AWP166118", - "BodyPartExamined": "CTSPINE", - "PatientPosition": "HFS", - "ProcedureStepDescription": "Research_Research", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-T1w", - "ProtocolName": "GRE-T1w", - "ScanningSequence": "GR", - "SequenceVariant": "SP", - "SequenceName": "_fl3d1", + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 123.254, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma", + "InstitutionName": "Beijing_Tiantan_Hospital", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "Street_StreetNo_Beijing_Fengtai_CN_ZIP", + "DeviceSerialNumber": "166118", + "StationName": "AWP166118", + "BodyPartExamined": "CTSPINE", + "PatientPosition": "HFS", + "ProcedureStepDescription": "Research_Research", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-T1w", + "ProtocolName": "GRE-T1w", + "ScanningSequence": "GR", + "SequenceVariant": "SP", + "SequenceName": "_fl3d1", "ImageType": [ - "ORIGINAL", - "PRIMARY", - "M", - "NORM", + "ORIGINAL", + "PRIMARY", + "M", + "NORM", "DIS2D" - ], - "SeriesNumber": 6, - "AcquisitionTime": "18:05:5.927500", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SAR": 0.0344401, - "EchoTime": 0.00313, - "RepetitionTime": 0.015, - "FlipAngle": 15, - "PartialFourier": 1, - "BaseResolution": 256, + ], + "SeriesNumber": 6, + "AcquisitionTime": "18:05:5.927500", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SAR": 0.0344401, + "EchoTime": 0.00313, + "RepetitionTime": 0.015, + "FlipAngle": 15, + "PartialFourier": 1, + "BaseResolution": 256, "ShimSetting": [ - 2112, - -11512, - -6032, - -600, - 53, - 2683, - -786, + 2112, + -11512, + -6032, + -600, + 53, + 2683, + -786, 187 - ], - "TxRefAmp": 296.858, - "PhaseResolution": 1, - "ReceiveCoilName": "Spine_32", - "ReceiveCoilActiveElements": "HC5,7;NC1,2;SP1", - "CoilString": "HC5_7;NC1_2;SP1", - "PulseSequenceDetails": "%SiemensSeq%_gre", - "RefLinesPE": 32, - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 100, - "PhaseEncodingSteps": 255, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 256, - "ParallelReductionFactorInPlane": 2, - "PixelBandwidth": 260, - "DwellTime": 7.5e-06, + ], + "TxRefAmp": 296.858, + "PhaseResolution": 1, + "ReceiveCoilName": "Spine_32", + "ReceiveCoilActiveElements": "HC5,7;NC1,2;SP1", + "CoilString": "HC5_7;NC1_2;SP1", + "PulseSequenceDetails": "%SiemensSeq%_gre", + "RefLinesPE": 32, + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 255, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "ParallelReductionFactorInPlane": 2, + "PixelBandwidth": 260, + "DwellTime": 7.5e-06, "ImageOrientationPatientDICOM": [ - 1, - 0, - 0, - 0, - 0.982287, + 1, + 0, + 0, + 0, + 0.982287, 0.187381 - ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20190902", - "Dcm2bidsVersion": "2.1.4" + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20190902", + "Dcm2bidsVersion": "2.1.4", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-beijingPrisma04/anat/sub-beijingPrisma04_space-other_T1w.json b/derivatives/data_preprocessed/sub-beijingPrisma04/anat/sub-beijingPrisma04_space-other_T1w.json index a6fbfe7ec0..0b20b3acf7 100644 --- a/derivatives/data_preprocessed/sub-beijingPrisma04/anat/sub-beijingPrisma04_space-other_T1w.json +++ b/derivatives/data_preprocessed/sub-beijingPrisma04/anat/sub-beijingPrisma04_space-other_T1w.json @@ -1,79 +1,83 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.254, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma", - "InstitutionName": "Beijing_Tiantan_Hospital", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "Street_StreetNo_Beijing_Fengtai_CN_ZIP", - "DeviceSerialNumber": "166118", - "StationName": "AWP166118", - "BodyPartExamined": "CTSPINE", - "PatientPosition": "HFS", - "ProcedureStepDescription": "Research_Research", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "T1w", - "ProtocolName": "T1w", - "ScanningSequence": "GR_IR", - "SequenceVariant": "SK_SP_MP", - "ScanOptions": "IR", - "SequenceName": "_tfl3d1_16", + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 123.254, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma", + "InstitutionName": "Beijing_Tiantan_Hospital", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "Street_StreetNo_Beijing_Fengtai_CN_ZIP", + "DeviceSerialNumber": "166118", + "StationName": "AWP166118", + "BodyPartExamined": "CTSPINE", + "PatientPosition": "HFS", + "ProcedureStepDescription": "Research_Research", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "T1w", + "ProtocolName": "T1w", + "ScanningSequence": "GR_IR", + "SequenceVariant": "SK_SP_MP", + "ScanOptions": "IR", + "SequenceName": "_tfl3d1_16", "ImageType": [ - "ORIGINAL", - "PRIMARY", - "M", - "NORM", - "DIS3D", + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS3D", "DIS2D" - ], - "SeriesNumber": 2, - "AcquisitionTime": "17:41:20.000000", - "AcquisitionNumber": 1, - "SliceThickness": 1, - "SAR": 0.0688126, - "EchoTime": 0.00372, - "RepetitionTime": 2, - "InversionTime": 1, - "FlipAngle": 9, - "PartialFourier": 1, - "BaseResolution": 320, + ], + "SeriesNumber": 2, + "AcquisitionTime": "17:41:20.000000", + "AcquisitionNumber": 1, + "SliceThickness": 1, + "SAR": 0.0688126, + "EchoTime": 0.00372, + "RepetitionTime": 2, + "InversionTime": 1, + "FlipAngle": 9, + "PartialFourier": 1, + "BaseResolution": 320, "ShimSetting": [ - 2097, - -11511, - -5960, - -183, - -22, - 304, - -85, + 2097, + -11511, + -5960, + -183, + -22, + 304, + -85, -5 - ], - "TxRefAmp": 289.744, - "PhaseResolution": 1, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC5-7;NC1,2;SP1", - "CoilString": "HC5-7;NC1_2;SP1", - "PulseSequenceDetails": "%SiemensSeq%_tfl", - "RefLinesPE": 24, - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 53.125, - "PhaseEncodingSteps": 170, - "AcquisitionMatrixPE": 170, - "ReconMatrixPE": 170, - "ParallelReductionFactorInPlane": 2, - "PixelBandwidth": 150, - "DwellTime": 1.04e-05, + ], + "TxRefAmp": 289.744, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC5-7;NC1,2;SP1", + "CoilString": "HC5-7;NC1_2;SP1", + "PulseSequenceDetails": "%SiemensSeq%_tfl", + "RefLinesPE": 24, + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 53.125, + "PhaseEncodingSteps": 170, + "AcquisitionMatrixPE": 170, + "ReconMatrixPE": 170, + "ParallelReductionFactorInPlane": 2, + "PixelBandwidth": 150, + "DwellTime": 1.04e-05, "ImageOrientationPatientDICOM": [ - 0, - 1, - 0, - 0, - 0, + 0, + 1, + 0, + 0, + 0, -1 - ], - "InPlanePhaseEncodingDirectionDICOM": "ROW", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20190902", - "Dcm2bidsVersion": "2.1.4" + ], + "InPlanePhaseEncodingDirectionDICOM": "ROW", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20190902", + "Dcm2bidsVersion": "2.1.4", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-beijingPrisma04/anat/sub-beijingPrisma04_space-other_T2star.json b/derivatives/data_preprocessed/sub-beijingPrisma04/anat/sub-beijingPrisma04_space-other_T2star.json index 896c556b5d..50c25f6bff 100644 --- a/derivatives/data_preprocessed/sub-beijingPrisma04/anat/sub-beijingPrisma04_space-other_T2star.json +++ b/derivatives/data_preprocessed/sub-beijingPrisma04/anat/sub-beijingPrisma04_space-other_T2star.json @@ -95,5 +95,9 @@ "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20190902", "Dcm2bidsVersion": "2.1.4", - "AcquisitionDuration": 285.0 + "AcquisitionDuration": 285.0, + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-beijingPrisma04/anat/sub-beijingPrisma04_space-other_T2w.json b/derivatives/data_preprocessed/sub-beijingPrisma04/anat/sub-beijingPrisma04_space-other_T2w.json index 1817f4d4a4..e859350139 100644 --- a/derivatives/data_preprocessed/sub-beijingPrisma04/anat/sub-beijingPrisma04_space-other_T2w.json +++ b/derivatives/data_preprocessed/sub-beijingPrisma04/anat/sub-beijingPrisma04_space-other_T2w.json @@ -1,81 +1,85 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.254, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma", - "InstitutionName": "Beijing_Tiantan_Hospital", - 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a/derivatives/data_preprocessed/sub-beijingPrisma05/anat/sub-beijingPrisma05_flip-1_mt-on_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-beijingPrisma05/anat/sub-beijingPrisma05_flip-1_mt-on_space-other_MTS.json @@ -1,77 +1,80 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.254, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma", - "InstitutionName": "Beijing_Tiantan_Hospital", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "Street_StreetNo_Beijing_Fengtai_CN_ZIP", - "DeviceSerialNumber": "166118", - "StationName": "AWP166118", - "BodyPartExamined": "CTSPINE", - "PatientPosition": "HFS", - "ProcedureStepDescription": "Research_Research", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-MT1", - "ProtocolName": "GRE-MT1", - "ScanningSequence": "GR", - "SequenceVariant": "MTC_SP", - "ScanOptions": "MT", - "SequenceName": "_fl3d1", + "Modality": "MR", + 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"FlipAngle": 9, - "PartialFourier": 1, - "BaseResolution": 256, + ], + "SeriesNumber": 5, + "AcquisitionTime": "19:25:51.945000", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SAR": 0.300064, + "EchoTime": 0.00313, + "RepetitionTime": 0.035, + "FlipAngle": 9, + "PartialFourier": 1, + "BaseResolution": 256, "ShimSetting": [ - 2085, - -11691, - -5983, - -1103, - -210, - 1577, - -148, + 2085, + -11691, + -5983, + -1103, + -210, + 1577, + -148, 70 - ], - "TxRefAmp": 254.69, - "PhaseResolution": 1, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC5-7;NC1,2", - "CoilString": "HC5-7;NC1_2", - "PulseSequenceDetails": "%SiemensSeq%_gre", - "RefLinesPE": 32, - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 100, - "PhaseEncodingSteps": 255, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 256, - "ParallelReductionFactorInPlane": 2, - "PixelBandwidth": 260, - "DwellTime": 7.5e-06, + ], + "TxRefAmp": 254.69, + "PhaseResolution": 1, + 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a/derivatives/data_preprocessed/sub-beijingPrisma05/anat/sub-beijingPrisma05_flip-2_mt-off_space-other_MTS.json b/derivatives/data_preprocessed/sub-beijingPrisma05/anat/sub-beijingPrisma05_flip-2_mt-off_space-other_MTS.json index cf2e7db93f..8ec8f6e7ad 100644 --- a/derivatives/data_preprocessed/sub-beijingPrisma05/anat/sub-beijingPrisma05_flip-2_mt-off_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-beijingPrisma05/anat/sub-beijingPrisma05_flip-2_mt-off_space-other_MTS.json @@ -1,76 +1,79 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.254, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma", - "InstitutionName": "Beijing_Tiantan_Hospital", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "Street_StreetNo_Beijing_Fengtai_CN_ZIP", - "DeviceSerialNumber": "166118", - "StationName": "AWP166118", - "BodyPartExamined": "CTSPINE", - "PatientPosition": "HFS", - "ProcedureStepDescription": "Research_Research", - 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"M", + "NORM", "DIS2D" - ], - "SeriesNumber": 7, - "AcquisitionTime": "19:30:16.935000", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SAR": 0.0194552, - "EchoTime": 0.00313, - "RepetitionTime": 0.015, - "FlipAngle": 15, - "PartialFourier": 1, - "BaseResolution": 256, + ], + "SeriesNumber": 7, + "AcquisitionTime": "19:30:16.935000", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SAR": 0.0194552, + "EchoTime": 0.00313, + "RepetitionTime": 0.015, + "FlipAngle": 15, + "PartialFourier": 1, + "BaseResolution": 256, "ShimSetting": [ - 2085, - -11691, - -5983, - -1103, - -210, - 1577, - -148, + 2085, + -11691, + -5983, + -1103, + -210, + 1577, + -148, 70 - ], - "TxRefAmp": 254.69, - "PhaseResolution": 1, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC5-7;NC1,2", - "CoilString": "HC5-7;NC1_2", - "PulseSequenceDetails": "%SiemensSeq%_gre", - "RefLinesPE": 32, - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 100, - "PhaseEncodingSteps": 255, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 256, - "ParallelReductionFactorInPlane": 2, - "PixelBandwidth": 260, - "DwellTime": 7.5e-06, + ], + "TxRefAmp": 254.69, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC5-7;NC1,2", + "CoilString": "HC5-7;NC1_2", + "PulseSequenceDetails": "%SiemensSeq%_gre", + "RefLinesPE": 32, + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 255, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "ParallelReductionFactorInPlane": 2, + "PixelBandwidth": 260, + "DwellTime": 7.5e-06, "ImageOrientationPatientDICOM": [ - 1, - 0, - 0, - 0, - 0.990268, + 1, + 0, + 0, + 0, + 0.990268, 0.139173 - ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20190902", - "Dcm2bidsVersion": "2.1.4" + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20190902", + "Dcm2bidsVersion": "2.1.4", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-beijingPrisma05/anat/sub-beijingPrisma05_space-other_T1w.json b/derivatives/data_preprocessed/sub-beijingPrisma05/anat/sub-beijingPrisma05_space-other_T1w.json index 9c12e2b4cb..c08edfdef0 100644 --- a/derivatives/data_preprocessed/sub-beijingPrisma05/anat/sub-beijingPrisma05_space-other_T1w.json +++ b/derivatives/data_preprocessed/sub-beijingPrisma05/anat/sub-beijingPrisma05_space-other_T1w.json @@ -1,79 +1,83 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.254, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma", - "InstitutionName": "Beijing_Tiantan_Hospital", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "Street_StreetNo_Beijing_Fengtai_CN_ZIP", - "DeviceSerialNumber": "166118", - "StationName": "AWP166118", - "BodyPartExamined": "CTSPINE", - "PatientPosition": "HFS", - "ProcedureStepDescription": "Research_Research", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "T1w", - "ProtocolName": "T1w", - "ScanningSequence": "GR_IR", - "SequenceVariant": "SK_SP_MP", - "ScanOptions": "IR", - "SequenceName": "_tfl3d1_16", + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 123.254, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma", + "InstitutionName": "Beijing_Tiantan_Hospital", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "Street_StreetNo_Beijing_Fengtai_CN_ZIP", + "DeviceSerialNumber": "166118", + "StationName": "AWP166118", + "BodyPartExamined": "CTSPINE", + "PatientPosition": "HFS", + "ProcedureStepDescription": "Research_Research", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "T1w", + "ProtocolName": "T1w", + "ScanningSequence": "GR_IR", + "SequenceVariant": "SK_SP_MP", + "ScanOptions": "IR", + "SequenceName": "_tfl3d1_16", "ImageType": [ - "ORIGINAL", - "PRIMARY", - "M", - "NORM", - "DIS3D", + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS3D", "DIS2D" - ], - "SeriesNumber": 2, - "AcquisitionTime": "19:11:5.222500", - "AcquisitionNumber": 1, - "SliceThickness": 1, - "SAR": 0.0499092, - "EchoTime": 0.00372, - "RepetitionTime": 2, - "InversionTime": 1, - "FlipAngle": 9, - "PartialFourier": 1, - "BaseResolution": 320, + ], + "SeriesNumber": 2, + "AcquisitionTime": "19:11:5.222500", + "AcquisitionNumber": 1, + "SliceThickness": 1, + "SAR": 0.0499092, + "EchoTime": 0.00372, + "RepetitionTime": 2, + "InversionTime": 1, + "FlipAngle": 9, + "PartialFourier": 1, + "BaseResolution": 320, "ShimSetting": [ - 2085, - -11533, - -5977, - -263, - -48, - 180, - 84, + 2085, + -11533, + -5977, + -263, + -48, + 180, + 84, -11 - ], - "TxRefAmp": 260.392, - "PhaseResolution": 1, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC5-7;NC1,2;SP1", - "CoilString": "HC5-7;NC1_2;SP1", - "PulseSequenceDetails": "%SiemensSeq%_tfl", - "RefLinesPE": 24, - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 81.25, - "PhaseEncodingSteps": 259, - "AcquisitionMatrixPE": 260, - "ReconMatrixPE": 260, - "ParallelReductionFactorInPlane": 2, - "PixelBandwidth": 150, - "DwellTime": 1.04e-05, + ], + "TxRefAmp": 260.392, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC5-7;NC1,2;SP1", + "CoilString": "HC5-7;NC1_2;SP1", + "PulseSequenceDetails": "%SiemensSeq%_tfl", + "RefLinesPE": 24, + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 81.25, + "PhaseEncodingSteps": 259, + "AcquisitionMatrixPE": 260, + "ReconMatrixPE": 260, + "ParallelReductionFactorInPlane": 2, + "PixelBandwidth": 150, + "DwellTime": 1.04e-05, "ImageOrientationPatientDICOM": [ - 0, - 1, - 0, - 0, - 0, + 0, + 1, + 0, + 0, + 0, -1 - ], - "InPlanePhaseEncodingDirectionDICOM": "ROW", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20190902", - "Dcm2bidsVersion": "2.1.4" + ], + "InPlanePhaseEncodingDirectionDICOM": "ROW", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20190902", + "Dcm2bidsVersion": "2.1.4", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-beijingPrisma05/anat/sub-beijingPrisma05_space-other_T2star.json b/derivatives/data_preprocessed/sub-beijingPrisma05/anat/sub-beijingPrisma05_space-other_T2star.json index 23a6c46c57..7ff3e715ad 100644 --- a/derivatives/data_preprocessed/sub-beijingPrisma05/anat/sub-beijingPrisma05_space-other_T2star.json +++ b/derivatives/data_preprocessed/sub-beijingPrisma05/anat/sub-beijingPrisma05_space-other_T2star.json @@ -95,5 +95,9 @@ "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20190902", "Dcm2bidsVersion": "2.1.4", - "AcquisitionDuration": 285.0 + "AcquisitionDuration": 285.0, + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-beijingPrisma05/anat/sub-beijingPrisma05_space-other_T2w.json b/derivatives/data_preprocessed/sub-beijingPrisma05/anat/sub-beijingPrisma05_space-other_T2w.json index 49cd23c027..3212a102fe 100644 --- a/derivatives/data_preprocessed/sub-beijingPrisma05/anat/sub-beijingPrisma05_space-other_T2w.json +++ b/derivatives/data_preprocessed/sub-beijingPrisma05/anat/sub-beijingPrisma05_space-other_T2w.json @@ -1,81 +1,85 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.254, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma", - "InstitutionName": "Beijing_Tiantan_Hospital", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": 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b/derivatives/data_preprocessed/sub-beijingVerio01/anat/sub-beijingVerio01_space-other_T1w.json @@ -1,75 +1,79 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.249, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Verio", - "InstitutionName": "Beijing_Tiantan_Hospital", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "Street_StreetNo_Beijinig_63f344_District_CN_ZIP", - "DeviceSerialNumber": "40717", - "StationName": "MRC40717", - "PatientPosition": "HFS", - "ProcedureStepDescription": "c-spine_clinical_libraries", - "SoftwareVersions": "syngo_MR_B19", - "MRAcquisitionType": "3D", - "SeriesDescription": "T1w", - "ProtocolName": "T1w", - "ScanningSequence": "GR_IR", - "SequenceVariant": "SP_MP", - "ScanOptions": "IR", - "SequenceName": "_tfl3d1", + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 123.249, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Verio", + "InstitutionName": 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a/derivatives/data_preprocessed/sub-beijingVerio01/anat/sub-beijingVerio01_space-other_T2star.json +++ b/derivatives/data_preprocessed/sub-beijingVerio01/anat/sub-beijingVerio01_space-other_T2star.json @@ -89,5 +89,9 @@ "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20190902", "Dcm2bidsVersion": "2.1.4", - "AcquisitionDuration": 290.0 + "AcquisitionDuration": 290.0, + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-beijingVerio01/anat/sub-beijingVerio01_space-other_T2w.json b/derivatives/data_preprocessed/sub-beijingVerio01/anat/sub-beijingVerio01_space-other_T2w.json index f3ec7cf94b..543081627a 100644 --- a/derivatives/data_preprocessed/sub-beijingVerio01/anat/sub-beijingVerio01_space-other_T2w.json +++ b/derivatives/data_preprocessed/sub-beijingVerio01/anat/sub-beijingVerio01_space-other_T2w.json @@ -1,76 +1,80 @@ { 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b/derivatives/data_preprocessed/sub-beijingVerio02/anat/sub-beijingVerio02_space-other_T1w.json @@ -1,75 +1,79 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.249, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Verio", - "InstitutionName": "Beijing_Tiantan_Hospital", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "Street_StreetNo_Beijinig_63f344_District_CN_ZIP", - "DeviceSerialNumber": "40717", - "StationName": "MRC40717", - "PatientPosition": "HFS", - "ProcedureStepDescription": "c-spine_clinical_libraries", - "SoftwareVersions": "syngo_MR_B19", - "MRAcquisitionType": "3D", - "SeriesDescription": "T1w", - "ProtocolName": "T1w", - "ScanningSequence": "GR_IR", - "SequenceVariant": "SP_MP", - "ScanOptions": "IR", - "SequenceName": "_tfl3d1", + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 123.249, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Verio", + "InstitutionName": "Beijing_Tiantan_Hospital", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "Street_StreetNo_Beijinig_63f344_District_CN_ZIP", + "DeviceSerialNumber": "40717", + "StationName": "MRC40717", + "PatientPosition": "HFS", + "ProcedureStepDescription": "c-spine_clinical_libraries", + "SoftwareVersions": "syngo_MR_B19", + "MRAcquisitionType": "3D", + "SeriesDescription": "T1w", + "ProtocolName": "T1w", + "ScanningSequence": "GR_IR", + "SequenceVariant": "SP_MP", + "ScanOptions": "IR", + "SequenceName": "_tfl3d1", "ImageType": [ - "ORIGINAL", - "PRIMARY", - "M", - "NORM", + "ORIGINAL", + "PRIMARY", + "M", + "NORM", "DIS2D" - ], - "SeriesNumber": 2, - "AcquisitionTime": "19:01:46.942500", - "AcquisitionNumber": 1, - "SliceThickness": 1, - "SAR": 0.0524554, - "EchoTime": 0.00321, - "RepetitionTime": 2, - "InversionTime": 1, - "FlipAngle": 9, - "PartialFourier": 1, - "BaseResolution": 320, + ], + "SeriesNumber": 2, + "AcquisitionTime": "19:01:46.942500", + 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a/derivatives/data_preprocessed/sub-beijingVerio02/anat/sub-beijingVerio02_space-other_T2star.json +++ b/derivatives/data_preprocessed/sub-beijingVerio02/anat/sub-beijingVerio02_space-other_T2star.json @@ -89,5 +89,9 @@ "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20190902", "Dcm2bidsVersion": "2.1.4", - "AcquisitionDuration": 290.0 + "AcquisitionDuration": 290.0, + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-beijingVerio02/anat/sub-beijingVerio02_space-other_T2w.json b/derivatives/data_preprocessed/sub-beijingVerio02/anat/sub-beijingVerio02_space-other_T2w.json index f37bfcbf83..b5298049e5 100644 --- a/derivatives/data_preprocessed/sub-beijingVerio02/anat/sub-beijingVerio02_space-other_T2w.json +++ b/derivatives/data_preprocessed/sub-beijingVerio02/anat/sub-beijingVerio02_space-other_T2w.json @@ -1,76 +1,80 @@ { 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b/derivatives/data_preprocessed/sub-beijingVerio03/anat/sub-beijingVerio03_space-other_T1w.json @@ -1,75 +1,79 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.249, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Verio", - "InstitutionName": "Beijing_Tiantan_Hospital", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "Street_StreetNo_Beijinig_63f344_District_CN_ZIP", - "DeviceSerialNumber": "40717", - "StationName": "MRC40717", - "PatientPosition": "HFS", - "ProcedureStepDescription": "c-spine_clinical_libraries", - "SoftwareVersions": "syngo_MR_B19", - "MRAcquisitionType": "3D", - "SeriesDescription": "T1w", - "ProtocolName": "T1w", - "ScanningSequence": "GR_IR", - "SequenceVariant": "SP_MP", - "ScanOptions": "IR", - "SequenceName": "_tfl3d1", + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 123.249, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Verio", + "InstitutionName": 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a/derivatives/data_preprocessed/sub-beijingVerio03/anat/sub-beijingVerio03_space-other_T2star.json +++ b/derivatives/data_preprocessed/sub-beijingVerio03/anat/sub-beijingVerio03_space-other_T2star.json @@ -89,5 +89,9 @@ "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20190902", "Dcm2bidsVersion": "2.1.4", - "AcquisitionDuration": 290.0 + "AcquisitionDuration": 290.0, + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-beijingVerio03/anat/sub-beijingVerio03_space-other_T2w.json b/derivatives/data_preprocessed/sub-beijingVerio03/anat/sub-beijingVerio03_space-other_T2w.json index d8d653eca7..7c92303765 100644 --- a/derivatives/data_preprocessed/sub-beijingVerio03/anat/sub-beijingVerio03_space-other_T2w.json +++ b/derivatives/data_preprocessed/sub-beijingVerio03/anat/sub-beijingVerio03_space-other_T2w.json @@ -1,76 +1,80 @@ { 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b/derivatives/data_preprocessed/sub-beijingVerio04/anat/sub-beijingVerio04_space-other_T1w.json @@ -1,75 +1,79 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.249, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Verio", - "InstitutionName": "Beijing_Tiantan_Hospital", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "Street_StreetNo_Beijinig_63f344_District_CN_ZIP", - "DeviceSerialNumber": "40717", - "StationName": "MRC40717", - "PatientPosition": "HFS", - "ProcedureStepDescription": "c-spine_clinical_libraries", - "SoftwareVersions": "syngo_MR_B19", - "MRAcquisitionType": "3D", - "SeriesDescription": "T1w", - "ProtocolName": "T1w", - "ScanningSequence": "GR_IR", - "SequenceVariant": "SP_MP", - "ScanOptions": "IR", - "SequenceName": "_tfl3d1", + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 123.249, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Verio", + "InstitutionName": "Beijing_Tiantan_Hospital", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "Street_StreetNo_Beijinig_63f344_District_CN_ZIP", + "DeviceSerialNumber": "40717", + "StationName": "MRC40717", + "PatientPosition": "HFS", + "ProcedureStepDescription": "c-spine_clinical_libraries", + "SoftwareVersions": "syngo_MR_B19", + "MRAcquisitionType": "3D", + "SeriesDescription": "T1w", + "ProtocolName": "T1w", + "ScanningSequence": "GR_IR", + "SequenceVariant": "SP_MP", + "ScanOptions": "IR", + "SequenceName": "_tfl3d1", "ImageType": [ - "ORIGINAL", - "PRIMARY", - "M", - "NORM", + "ORIGINAL", + "PRIMARY", + "M", + "NORM", "DIS2D" - ], - "SeriesNumber": 2, - "AcquisitionTime": "17:45:51.940000", - "AcquisitionNumber": 1, - "SliceThickness": 1, - "SAR": 0.0611624, - "EchoTime": 0.00321, - "RepetitionTime": 2, - "InversionTime": 1, - "FlipAngle": 9, - "PartialFourier": 1, - "BaseResolution": 320, + ], + "SeriesNumber": 2, + "AcquisitionTime": "17:45:51.940000", + 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a/derivatives/data_preprocessed/sub-beijingVerio04/anat/sub-beijingVerio04_space-other_T2star.json +++ b/derivatives/data_preprocessed/sub-beijingVerio04/anat/sub-beijingVerio04_space-other_T2star.json @@ -89,5 +89,9 @@ "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20190902", "Dcm2bidsVersion": "2.1.4", - "AcquisitionDuration": 290.0 + "AcquisitionDuration": 290.0, + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-beijingVerio04/anat/sub-beijingVerio04_space-other_T2w.json b/derivatives/data_preprocessed/sub-beijingVerio04/anat/sub-beijingVerio04_space-other_T2w.json index 3205deb7d8..d891174262 100644 --- a/derivatives/data_preprocessed/sub-beijingVerio04/anat/sub-beijingVerio04_space-other_T2w.json +++ b/derivatives/data_preprocessed/sub-beijingVerio04/anat/sub-beijingVerio04_space-other_T2w.json @@ -1,76 +1,80 @@ { 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a/derivatives/data_preprocessed/sub-brnoCeitec01/anat/sub-brnoCeitec01_flip-1_mt-on_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-brnoCeitec01/anat/sub-brnoCeitec01_flip-1_mt-on_space-other_MTS.json @@ -1,65 +1,75 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.219, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma", - "InstitutionName": "CEITEC", - "InstitutionalDepartmentName": "Centrum_neuroved", - "InstitutionAddress": "Kamenice_5_Brno_Moravia_CZ_62500", - "DeviceSerialNumber": "66041", - "StationName": "CEIMR1", - "BodyPartExamined": "CSPINE", - "PatientPosition": "HFS", - "ProcedureStepDescription": "c-spine_CEITEC", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-MT1", - "ProtocolName": "GRE-MT1", - "ScanningSequence": "GR", - "SequenceVariant": "MTC_SP", - "ScanOptions": "MT", - "SequenceName": "_fl3d1", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "DIS2D"], - "SeriesNumber": 7, - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SAR": 0.587143, - "EchoTime": 0.00313, - "RepetitionTime": 0.035, - "FlipAngle": 9, - "PartialFourier": 1, - "BaseResolution": 256, - "ShimSetting": [ - 4162, - -8774, - -6294, - -1451, - -46, - 1718, - -244, - -132 ], - "TxRefAmp": 326.784, - "PhaseResolution": 1, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC7;NC1,2", - "CoilString": "HC7;NC1_2", - "PulseSequenceDetails": "%SiemensSeq%_gre", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 100, - "PhaseEncodingSteps": 255, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 256, - "PixelBandwidth": 260, - "DwellTime": 7.5e-06, - "ImageOrientationPatientDICOM": [ - 1, - -3.86052e-06, - 5.64282e-05, - 1.47497e-08, - 0.997686, - 0.067995 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181125 GCC4.9.2" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 123.219, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma", + "InstitutionName": "CEITEC", + "InstitutionalDepartmentName": "Centrum_neuroved", + "InstitutionAddress": "Kamenice_5_Brno_Moravia_CZ_62500", + "DeviceSerialNumber": "66041", + "StationName": "CEIMR1", + "BodyPartExamined": "CSPINE", + "PatientPosition": "HFS", + "ProcedureStepDescription": "c-spine_CEITEC", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-MT1", + "ProtocolName": "GRE-MT1", + "ScanningSequence": "GR", + "SequenceVariant": "MTC_SP", + "ScanOptions": "MT", + "SequenceName": "_fl3d1", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "DIS2D" + ], + "SeriesNumber": 7, + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SAR": 0.587143, + "EchoTime": 0.00313, + "RepetitionTime": 0.035, + "FlipAngle": 9, + "PartialFourier": 1, + "BaseResolution": 256, + "ShimSetting": [ + 4162, + -8774, + -6294, + -1451, + -46, + 1718, + -244, + -132 + ], + "TxRefAmp": 326.784, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC7;NC1,2", + "CoilString": "HC7;NC1_2", + "PulseSequenceDetails": "%SiemensSeq%_gre", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 255, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "PixelBandwidth": 260, + "DwellTime": 7.5e-06, + "ImageOrientationPatientDICOM": [ + 1, + -3.86052e-06, + 5.64282e-05, + 1.47497e-08, + 0.997686, + 0.067995 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181125 GCC4.9.2", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-brnoCeitec01/anat/sub-brnoCeitec01_flip-2_mt-off_space-other_MTS.json b/derivatives/data_preprocessed/sub-brnoCeitec01/anat/sub-brnoCeitec01_flip-2_mt-off_space-other_MTS.json index 5a57d910ba..00a0cbd267 100644 --- a/derivatives/data_preprocessed/sub-brnoCeitec01/anat/sub-brnoCeitec01_flip-2_mt-off_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-brnoCeitec01/anat/sub-brnoCeitec01_flip-2_mt-off_space-other_MTS.json @@ -1,64 +1,74 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.219, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma", - "InstitutionName": "CEITEC", - "InstitutionalDepartmentName": "Centrum_neuroved", - "InstitutionAddress": "Kamenice_5_Brno_Moravia_CZ_62500", - "DeviceSerialNumber": "66041", - "StationName": "CEIMR1", - "BodyPartExamined": "CSPINE", - "PatientPosition": "HFS", - "ProcedureStepDescription": "c-spine_CEITEC", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-T1w", - "ProtocolName": "GRE-T1w", - "ScanningSequence": "GR", - "SequenceVariant": "SP", - "SequenceName": "_fl3d1", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "DIS2D"], - "SeriesNumber": 9, - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SAR": 0.0380686, - "EchoTime": 0.00313, - "RepetitionTime": 0.015, - "FlipAngle": 15, - "PartialFourier": 1, - "BaseResolution": 256, - "ShimSetting": [ - 4162, - -8774, - -6294, - -1451, - -46, - 1718, - -244, - -132 ], - "TxRefAmp": 326.784, - "PhaseResolution": 1, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC7;NC1,2", - "CoilString": "HC7;NC1_2", - "PulseSequenceDetails": "%SiemensSeq%_gre", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 100, - "PhaseEncodingSteps": 255, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 256, - "PixelBandwidth": 260, - "DwellTime": 7.5e-06, - "ImageOrientationPatientDICOM": [ - 1, - -3.86052e-06, - 5.64282e-05, - 1.47497e-08, - 0.997686, - 0.067995 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181125 GCC4.9.2" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 123.219, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma", + "InstitutionName": "CEITEC", + "InstitutionalDepartmentName": "Centrum_neuroved", + "InstitutionAddress": "Kamenice_5_Brno_Moravia_CZ_62500", + "DeviceSerialNumber": "66041", + "StationName": "CEIMR1", + "BodyPartExamined": "CSPINE", + "PatientPosition": "HFS", + "ProcedureStepDescription": "c-spine_CEITEC", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-T1w", + "ProtocolName": "GRE-T1w", + "ScanningSequence": "GR", + "SequenceVariant": "SP", + "SequenceName": "_fl3d1", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "DIS2D" + ], + "SeriesNumber": 9, + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SAR": 0.0380686, + "EchoTime": 0.00313, + "RepetitionTime": 0.015, + "FlipAngle": 15, + "PartialFourier": 1, + "BaseResolution": 256, + "ShimSetting": [ + 4162, + -8774, + -6294, + -1451, + -46, + 1718, + -244, + -132 + ], + "TxRefAmp": 326.784, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC7;NC1,2", + "CoilString": "HC7;NC1_2", + "PulseSequenceDetails": "%SiemensSeq%_gre", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 255, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "PixelBandwidth": 260, + "DwellTime": 7.5e-06, + "ImageOrientationPatientDICOM": [ + 1, + -3.86052e-06, + 5.64282e-05, + 1.47497e-08, + 0.997686, + 0.067995 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181125 GCC4.9.2", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-brnoCeitec01/anat/sub-brnoCeitec01_space-other_T1w.json b/derivatives/data_preprocessed/sub-brnoCeitec01/anat/sub-brnoCeitec01_space-other_T1w.json index 54d32d39c5..27bdf01ac5 100644 --- a/derivatives/data_preprocessed/sub-brnoCeitec01/anat/sub-brnoCeitec01_space-other_T1w.json +++ b/derivatives/data_preprocessed/sub-brnoCeitec01/anat/sub-brnoCeitec01_space-other_T1w.json @@ -1,66 +1,79 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.219, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma", - "InstitutionName": "CEITEC", - "InstitutionalDepartmentName": "Centrum_neuroved", - "InstitutionAddress": "Kamenice_5_Brno_Moravia_CZ_62500", - "DeviceSerialNumber": "66041", - "StationName": "CEIMR1", - "BodyPartExamined": "CSPINE", - "PatientPosition": "HFS", - "ProcedureStepDescription": "c-spine_CEITEC", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "T1w", - "ProtocolName": "T1w", - "ScanningSequence": "GR_IR", - "SequenceVariant": "SK_SP_MP", - "ScanOptions": "IR", - "SequenceName": "_tfl3d1_16", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS3D", "DIS2D"], - "SeriesNumber": 2, - "AcquisitionNumber": 1, - "SliceThickness": 1, - "SAR": 0.0602007, - "EchoTime": 0.00372, - "RepetitionTime": 2, - "InversionTime": 1, - "FlipAngle": 9, - "PartialFourier": 1, - "BaseResolution": 320, - "ShimSetting": [ - 4187, - -8704, - -6389, - 107, - 6, - -135, - -23, - 31 ], - "TxRefAmp": 287.354, - "PhaseResolution": 1, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC1-7;NC1,2", - "CoilString": "HC1-7;NC1_2", - "PulseSequenceDetails": "%SiemensSeq%_tfl", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 81.25, - "PhaseEncodingSteps": 259, - "AcquisitionMatrixPE": 260, - "ReconMatrixPE": 320, - "PixelBandwidth": 150, - "DwellTime": 1.04e-05, - "ImageOrientationPatientDICOM": [ - 0, - 1, - 0, - -0.0244322, - 0, - -0.999701 ], - "InPlanePhaseEncodingDirectionDICOM": "ROW", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181125 GCC4.9.2" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 123.219, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma", + "InstitutionName": "CEITEC", + "InstitutionalDepartmentName": "Centrum_neuroved", + "InstitutionAddress": "Kamenice_5_Brno_Moravia_CZ_62500", + "DeviceSerialNumber": "66041", + "StationName": "CEIMR1", + "BodyPartExamined": "CSPINE", + "PatientPosition": "HFS", + "ProcedureStepDescription": "c-spine_CEITEC", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "T1w", + "ProtocolName": "T1w", + "ScanningSequence": "GR_IR", + "SequenceVariant": "SK_SP_MP", + "ScanOptions": "IR", + "SequenceName": "_tfl3d1_16", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS3D", + "DIS2D" + ], + "SeriesNumber": 2, + "AcquisitionNumber": 1, + "SliceThickness": 1, + "SAR": 0.0602007, + "EchoTime": 0.00372, + "RepetitionTime": 2, + "InversionTime": 1, + "FlipAngle": 9, + "PartialFourier": 1, + "BaseResolution": 320, + "ShimSetting": [ + 4187, + -8704, + -6389, + 107, + 6, + -135, + -23, + 31 + ], + "TxRefAmp": 287.354, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC1-7;NC1,2", + "CoilString": "HC1-7;NC1_2", + "PulseSequenceDetails": "%SiemensSeq%_tfl", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 81.25, + "PhaseEncodingSteps": 259, + "AcquisitionMatrixPE": 260, + "ReconMatrixPE": 320, + "PixelBandwidth": 150, + "DwellTime": 1.04e-05, + "ImageOrientationPatientDICOM": [ + 0, + 1, + 0, + -0.0244322, + 0, + -0.999701 + ], + "InPlanePhaseEncodingDirectionDICOM": "ROW", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181125 GCC4.9.2", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-brnoCeitec01/anat/sub-brnoCeitec01_space-other_T2star.json b/derivatives/data_preprocessed/sub-brnoCeitec01/anat/sub-brnoCeitec01_space-other_T2star.json index f2894e4427..a75c7dc1d5 100644 --- a/derivatives/data_preprocessed/sub-brnoCeitec01/anat/sub-brnoCeitec01_space-other_T2star.json +++ b/derivatives/data_preprocessed/sub-brnoCeitec01/anat/sub-brnoCeitec01_space-other_T2star.json @@ -74,5 +74,9 @@ "InPlanePhaseEncodingDirectionDICOM": "COL", "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20181125 GCC4.9.2", - "AcquisitionDuration": 285.0 + "AcquisitionDuration": 285.0, + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-brnoCeitec01/anat/sub-brnoCeitec01_space-other_T2w.json b/derivatives/data_preprocessed/sub-brnoCeitec01/anat/sub-brnoCeitec01_space-other_T2w.json index dd79fb9c01..d588ca05d7 100644 --- a/derivatives/data_preprocessed/sub-brnoCeitec01/anat/sub-brnoCeitec01_space-other_T2w.json +++ b/derivatives/data_preprocessed/sub-brnoCeitec01/anat/sub-brnoCeitec01_space-other_T2w.json @@ -1,67 +1,80 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.219, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma", - "InstitutionName": "CEITEC", - "InstitutionalDepartmentName": "Centrum_neuroved", - "InstitutionAddress": "Kamenice_5_Brno_Moravia_CZ_62500", - "DeviceSerialNumber": "66041", - "StationName": "CEIMR1", - "BodyPartExamined": "CSPINE", - "PatientPosition": "HFS", - "ProcedureStepDescription": "c-spine_CEITEC", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "T2w", - "ProtocolName": "T2w", - "ScanningSequence": "SE", - "SequenceVariant": "SK_SP_OSP", - "ScanOptions": "PFP", - "SequenceName": "_spcR_100", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS3D", "DIS2D"], - "SeriesNumber": 5, - "AcquisitionNumber": 1, - "SliceThickness": 0.8, - "SAR": 0.593639, - "EchoTime": 0.12, - "RepetitionTime": 1.5, - "FlipAngle": 120, - "PartialFourier": 1, - "BaseResolution": 320, - "ShimSetting": [ - 4187, - -8704, - -6389, - 107, - 6, - -135, - -23, - 31 ], - "TxRefAmp": 326.784, - "PhaseResolution": 1, - "PhaseOversampling": 0.8, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC5-7;NC1,2", - "CoilString": "HC5-7;NC1_2", - "PulseSequenceDetails": "%SiemensSeq%_tse_vfl", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 100, - "EchoTrainLength": 76, - "PhaseEncodingSteps": 422, - "AcquisitionMatrixPE": 320, - "ReconMatrixPE": 320, - "PixelBandwidth": 625, - "DwellTime": 2.5e-06, - "ImageOrientationPatientDICOM": [ - 1.11e-13, - 1, - 4.895e-12, - -0.0226874, - 4.897e-12, - -0.999743 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181125 GCC4.9.2" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 123.219, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma", + "InstitutionName": "CEITEC", + "InstitutionalDepartmentName": "Centrum_neuroved", + "InstitutionAddress": "Kamenice_5_Brno_Moravia_CZ_62500", + "DeviceSerialNumber": "66041", + "StationName": "CEIMR1", + "BodyPartExamined": "CSPINE", + "PatientPosition": "HFS", + "ProcedureStepDescription": "c-spine_CEITEC", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "T2w", + "ProtocolName": "T2w", + "ScanningSequence": "SE", + "SequenceVariant": "SK_SP_OSP", + "ScanOptions": "PFP", + "SequenceName": "_spcR_100", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS3D", + "DIS2D" + ], + "SeriesNumber": 5, + "AcquisitionNumber": 1, + "SliceThickness": 0.8, + "SAR": 0.593639, + "EchoTime": 0.12, + "RepetitionTime": 1.5, + "FlipAngle": 120, + "PartialFourier": 1, + "BaseResolution": 320, + "ShimSetting": [ + 4187, + -8704, + -6389, + 107, + 6, + -135, + -23, + 31 + ], + "TxRefAmp": 326.784, + "PhaseResolution": 1, + "PhaseOversampling": 0.8, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC5-7;NC1,2", + "CoilString": "HC5-7;NC1_2", + "PulseSequenceDetails": "%SiemensSeq%_tse_vfl", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "EchoTrainLength": 76, + "PhaseEncodingSteps": 422, + "AcquisitionMatrixPE": 320, + "ReconMatrixPE": 320, + "PixelBandwidth": 625, + "DwellTime": 2.5e-06, + "ImageOrientationPatientDICOM": [ + 1.11e-13, + 1, + 4.895e-12, + -0.0226874, + 4.897e-12, + -0.999743 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181125 GCC4.9.2", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-brnoCeitec02/anat/sub-brnoCeitec02_flip-1_mt-on_space-other_MTS.json b/derivatives/data_preprocessed/sub-brnoCeitec02/anat/sub-brnoCeitec02_flip-1_mt-on_space-other_MTS.json index b70b1fc780..ca39c61abc 100644 --- a/derivatives/data_preprocessed/sub-brnoCeitec02/anat/sub-brnoCeitec02_flip-1_mt-on_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-brnoCeitec02/anat/sub-brnoCeitec02_flip-1_mt-on_space-other_MTS.json @@ -1,65 +1,75 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.219, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma", - "InstitutionName": "CEITEC", - "InstitutionalDepartmentName": "Centrum_neuroved", - "InstitutionAddress": "Kamenice_5_Brno_Moravia_CZ_62500", - "DeviceSerialNumber": "66041", - "StationName": "CEIMR1", - "BodyPartExamined": "CSPINE", - "PatientPosition": "HFS", - "ProcedureStepDescription": "c-spine_CEITEC", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-MT1", - "ProtocolName": "GRE-MT1", - "ScanningSequence": "GR", - "SequenceVariant": "MTC_SP", - "ScanOptions": "MT", - "SequenceName": "_fl3d1", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "DIS2D"], - "SeriesNumber": 7, - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SAR": 0.567666, - "EchoTime": 0.00313, - "RepetitionTime": 0.035, - "FlipAngle": 9, - "PartialFourier": 1, - "BaseResolution": 256, - "ShimSetting": [ - 4161, - -8665, - -6398, - -1180, - -146, - 3404, - -588, - -30 ], - "TxRefAmp": 260.285, - "PhaseResolution": 1, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC7;NC1,2", - "CoilString": "HC7;NC1_2", - "PulseSequenceDetails": "%SiemensSeq%_gre", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 100, - "PhaseEncodingSteps": 255, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 256, - "PixelBandwidth": 260, - "DwellTime": 7.5e-06, - "ImageOrientationPatientDICOM": [ - 0.999924, - 0.00181963, - -0.0121776, - 6.00868e-08, - 0.989019, - 0.147788 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181125 GCC4.9.2" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 123.219, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma", + "InstitutionName": "CEITEC", + "InstitutionalDepartmentName": "Centrum_neuroved", + "InstitutionAddress": "Kamenice_5_Brno_Moravia_CZ_62500", + "DeviceSerialNumber": "66041", + "StationName": "CEIMR1", + "BodyPartExamined": "CSPINE", + "PatientPosition": "HFS", + "ProcedureStepDescription": "c-spine_CEITEC", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-MT1", + "ProtocolName": "GRE-MT1", + "ScanningSequence": "GR", + "SequenceVariant": "MTC_SP", + "ScanOptions": "MT", + "SequenceName": "_fl3d1", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "DIS2D" + ], + "SeriesNumber": 7, + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SAR": 0.567666, + "EchoTime": 0.00313, + "RepetitionTime": 0.035, + "FlipAngle": 9, + "PartialFourier": 1, + "BaseResolution": 256, + "ShimSetting": [ + 4161, + -8665, + -6398, + -1180, + -146, + 3404, + -588, + -30 + ], + "TxRefAmp": 260.285, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC7;NC1,2", + "CoilString": "HC7;NC1_2", + "PulseSequenceDetails": "%SiemensSeq%_gre", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 255, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "PixelBandwidth": 260, + "DwellTime": 7.5e-06, + "ImageOrientationPatientDICOM": [ + 0.999924, + 0.00181963, + -0.0121776, + 6.00868e-08, + 0.989019, + 0.147788 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181125 GCC4.9.2", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-brnoCeitec02/anat/sub-brnoCeitec02_flip-2_mt-off_space-other_MTS.json b/derivatives/data_preprocessed/sub-brnoCeitec02/anat/sub-brnoCeitec02_flip-2_mt-off_space-other_MTS.json index f598df458a..7c70de45b5 100644 --- a/derivatives/data_preprocessed/sub-brnoCeitec02/anat/sub-brnoCeitec02_flip-2_mt-off_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-brnoCeitec02/anat/sub-brnoCeitec02_flip-2_mt-off_space-other_MTS.json @@ -1,64 +1,74 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.219, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma", - "InstitutionName": "CEITEC", - "InstitutionalDepartmentName": "Centrum_neuroved", - "InstitutionAddress": "Kamenice_5_Brno_Moravia_CZ_62500", - "DeviceSerialNumber": "66041", - "StationName": "CEIMR1", - "BodyPartExamined": "CSPINE", - "PatientPosition": "HFS", - "ProcedureStepDescription": "c-spine_CEITEC", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-T1w", - "ProtocolName": "GRE-T1w", - "ScanningSequence": "GR", - "SequenceVariant": "SP", - "SequenceName": "_fl3d1", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "DIS2D"], - "SeriesNumber": 9, - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SAR": 0.0368057, - "EchoTime": 0.00313, - "RepetitionTime": 0.015, - "FlipAngle": 15, - "PartialFourier": 1, - "BaseResolution": 256, - "ShimSetting": [ - 4161, - -8665, - -6398, - -1180, - -146, - 3404, - -588, - -30 ], - "TxRefAmp": 260.285, - "PhaseResolution": 1, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC7;NC1,2", - "CoilString": "HC7;NC1_2", - "PulseSequenceDetails": "%SiemensSeq%_gre", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 100, - "PhaseEncodingSteps": 255, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 256, - "PixelBandwidth": 260, - "DwellTime": 7.5e-06, - "ImageOrientationPatientDICOM": [ - 0.999924, - 0.00181963, - -0.0121776, - 6.00868e-08, - 0.989019, - 0.147788 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181125 GCC4.9.2" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 123.219, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma", + "InstitutionName": "CEITEC", + "InstitutionalDepartmentName": "Centrum_neuroved", + "InstitutionAddress": "Kamenice_5_Brno_Moravia_CZ_62500", + "DeviceSerialNumber": "66041", + "StationName": "CEIMR1", + "BodyPartExamined": "CSPINE", + "PatientPosition": "HFS", + "ProcedureStepDescription": "c-spine_CEITEC", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-T1w", + "ProtocolName": "GRE-T1w", + "ScanningSequence": "GR", + "SequenceVariant": "SP", + "SequenceName": "_fl3d1", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "DIS2D" + ], + "SeriesNumber": 9, + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SAR": 0.0368057, + "EchoTime": 0.00313, + "RepetitionTime": 0.015, + "FlipAngle": 15, + "PartialFourier": 1, + "BaseResolution": 256, + "ShimSetting": [ + 4161, + -8665, + -6398, + -1180, + -146, + 3404, + -588, + -30 + ], + "TxRefAmp": 260.285, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC7;NC1,2", + "CoilString": "HC7;NC1_2", + "PulseSequenceDetails": "%SiemensSeq%_gre", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 255, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "PixelBandwidth": 260, + "DwellTime": 7.5e-06, + "ImageOrientationPatientDICOM": [ + 0.999924, + 0.00181963, + -0.0121776, + 6.00868e-08, + 0.989019, + 0.147788 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181125 GCC4.9.2", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-brnoCeitec02/anat/sub-brnoCeitec02_space-other_T1w.json b/derivatives/data_preprocessed/sub-brnoCeitec02/anat/sub-brnoCeitec02_space-other_T1w.json index 7e6e952b30..031cbc8a66 100644 --- a/derivatives/data_preprocessed/sub-brnoCeitec02/anat/sub-brnoCeitec02_space-other_T1w.json +++ b/derivatives/data_preprocessed/sub-brnoCeitec02/anat/sub-brnoCeitec02_space-other_T1w.json @@ -1,66 +1,79 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.219, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma", - "InstitutionName": "CEITEC", - "InstitutionalDepartmentName": "Centrum_neuroved", - "InstitutionAddress": "Kamenice_5_Brno_Moravia_CZ_62500", - "DeviceSerialNumber": "66041", - "StationName": "CEIMR1", - "BodyPartExamined": "CSPINE", - "PatientPosition": "HFS", - "ProcedureStepDescription": "c-spine_CEITEC", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "T1w", - "ProtocolName": "T1w", - "ScanningSequence": "GR_IR", - "SequenceVariant": "SK_SP_MP", - "ScanOptions": "IR", - "SequenceName": "_tfl3d1_16", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS3D", "DIS2D"], - "SeriesNumber": 2, - "AcquisitionNumber": 1, - "SliceThickness": 1, - "SAR": 0.0636913, - "EchoTime": 0.00372, - "RepetitionTime": 2, - "InversionTime": 1, - "FlipAngle": 9, - "PartialFourier": 1, - "BaseResolution": 320, - "ShimSetting": [ - 4186, - -8705, - -6389, - 104, - 6, - -135, - -23, - 32 ], - "TxRefAmp": 242.916, - "PhaseResolution": 1, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC1-7;NC1,2", - "CoilString": "HC1-7;NC1_2", - "PulseSequenceDetails": "%SiemensSeq%_tfl", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 81.25, - "PhaseEncodingSteps": 259, - "AcquisitionMatrixPE": 260, - "ReconMatrixPE": 320, - "PixelBandwidth": 150, - "DwellTime": 1.04e-05, - "ImageOrientationPatientDICOM": [ - 0, - 1, - 0, - 0.0209424, - 0, - -0.999781 ], - "InPlanePhaseEncodingDirectionDICOM": "ROW", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181125 GCC4.9.2" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 123.219, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma", + "InstitutionName": "CEITEC", + "InstitutionalDepartmentName": "Centrum_neuroved", + "InstitutionAddress": "Kamenice_5_Brno_Moravia_CZ_62500", + "DeviceSerialNumber": "66041", + "StationName": "CEIMR1", + "BodyPartExamined": "CSPINE", + "PatientPosition": "HFS", + "ProcedureStepDescription": "c-spine_CEITEC", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "T1w", + "ProtocolName": "T1w", + "ScanningSequence": "GR_IR", + "SequenceVariant": "SK_SP_MP", + "ScanOptions": "IR", + "SequenceName": "_tfl3d1_16", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS3D", + "DIS2D" + ], + "SeriesNumber": 2, + "AcquisitionNumber": 1, + "SliceThickness": 1, + "SAR": 0.0636913, + "EchoTime": 0.00372, + "RepetitionTime": 2, + "InversionTime": 1, + "FlipAngle": 9, + "PartialFourier": 1, + "BaseResolution": 320, + "ShimSetting": [ + 4186, + -8705, + -6389, + 104, + 6, + -135, + -23, + 32 + ], + "TxRefAmp": 242.916, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC1-7;NC1,2", + "CoilString": "HC1-7;NC1_2", + "PulseSequenceDetails": "%SiemensSeq%_tfl", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 81.25, + "PhaseEncodingSteps": 259, + "AcquisitionMatrixPE": 260, + "ReconMatrixPE": 320, + "PixelBandwidth": 150, + "DwellTime": 1.04e-05, + "ImageOrientationPatientDICOM": [ + 0, + 1, + 0, + 0.0209424, + 0, + -0.999781 + ], + "InPlanePhaseEncodingDirectionDICOM": "ROW", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181125 GCC4.9.2", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-brnoCeitec02/anat/sub-brnoCeitec02_space-other_T2star.json b/derivatives/data_preprocessed/sub-brnoCeitec02/anat/sub-brnoCeitec02_space-other_T2star.json index bd282672b9..fc8484e427 100644 --- a/derivatives/data_preprocessed/sub-brnoCeitec02/anat/sub-brnoCeitec02_space-other_T2star.json +++ b/derivatives/data_preprocessed/sub-brnoCeitec02/anat/sub-brnoCeitec02_space-other_T2star.json @@ -74,5 +74,9 @@ "InPlanePhaseEncodingDirectionDICOM": "COL", "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20181125 GCC4.9.2", - "AcquisitionDuration": 285.0 + "AcquisitionDuration": 285.0, + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-brnoCeitec02/anat/sub-brnoCeitec02_space-other_T2w.json b/derivatives/data_preprocessed/sub-brnoCeitec02/anat/sub-brnoCeitec02_space-other_T2w.json index 4674890982..35ea2c9c0b 100644 --- a/derivatives/data_preprocessed/sub-brnoCeitec02/anat/sub-brnoCeitec02_space-other_T2w.json +++ b/derivatives/data_preprocessed/sub-brnoCeitec02/anat/sub-brnoCeitec02_space-other_T2w.json @@ -1,67 +1,80 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.219, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma", - "InstitutionName": "CEITEC", - "InstitutionalDepartmentName": "Centrum_neuroved", - "InstitutionAddress": "Kamenice_5_Brno_Moravia_CZ_62500", - "DeviceSerialNumber": "66041", - "StationName": "CEIMR1", - "BodyPartExamined": "CSPINE", - "PatientPosition": "HFS", - "ProcedureStepDescription": "c-spine_CEITEC", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "T2w", - "ProtocolName": "T2w", - "ScanningSequence": "SE", - "SequenceVariant": "SK_SP_OSP", - "ScanOptions": "PFP", - "SequenceName": "_spcR_100", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS3D", "DIS2D"], - "SeriesNumber": 5, - "AcquisitionNumber": 1, - "SliceThickness": 0.8, - "SAR": 0.573947, - "EchoTime": 0.12, - "RepetitionTime": 1.5, - "FlipAngle": 120, - "PartialFourier": 1, - "BaseResolution": 320, - "ShimSetting": [ - 4186, - -8705, - -6389, - 104, - 6, - -135, - -23, - 32 ], - "TxRefAmp": 260.285, - "PhaseResolution": 1, - "PhaseOversampling": 0.8, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC5-7;NC1,2", - "CoilString": "HC5-7;NC1_2", - "PulseSequenceDetails": "%SiemensSeq%_tse_vfl", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 100, - "EchoTrainLength": 76, - "PhaseEncodingSteps": 422, - "AcquisitionMatrixPE": 320, - "ReconMatrixPE": 320, - "PixelBandwidth": 625, - "DwellTime": 2.5e-06, - "ImageOrientationPatientDICOM": [ - 9.4e-14, - 1, - 4.896e-12, - -0.0191974, - 4.897e-12, - -0.999816 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181125 GCC4.9.2" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 123.219, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma", + "InstitutionName": "CEITEC", + "InstitutionalDepartmentName": "Centrum_neuroved", + "InstitutionAddress": "Kamenice_5_Brno_Moravia_CZ_62500", + "DeviceSerialNumber": "66041", + "StationName": "CEIMR1", + "BodyPartExamined": "CSPINE", + "PatientPosition": "HFS", + "ProcedureStepDescription": "c-spine_CEITEC", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "T2w", + "ProtocolName": "T2w", + "ScanningSequence": "SE", + "SequenceVariant": "SK_SP_OSP", + "ScanOptions": "PFP", + "SequenceName": "_spcR_100", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS3D", + "DIS2D" + ], + "SeriesNumber": 5, + "AcquisitionNumber": 1, + "SliceThickness": 0.8, + "SAR": 0.573947, + "EchoTime": 0.12, + "RepetitionTime": 1.5, + "FlipAngle": 120, + "PartialFourier": 1, + "BaseResolution": 320, + "ShimSetting": [ + 4186, + -8705, + -6389, + 104, + 6, + -135, + -23, + 32 + ], + "TxRefAmp": 260.285, + "PhaseResolution": 1, + "PhaseOversampling": 0.8, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC5-7;NC1,2", + "CoilString": "HC5-7;NC1_2", + "PulseSequenceDetails": "%SiemensSeq%_tse_vfl", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "EchoTrainLength": 76, + "PhaseEncodingSteps": 422, + "AcquisitionMatrixPE": 320, + "ReconMatrixPE": 320, + "PixelBandwidth": 625, + "DwellTime": 2.5e-06, + "ImageOrientationPatientDICOM": [ + 9.4e-14, + 1, + 4.896e-12, + -0.0191974, + 4.897e-12, + -0.999816 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181125 GCC4.9.2", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-brnoCeitec03/anat/sub-brnoCeitec03_flip-1_mt-on_space-other_MTS.json b/derivatives/data_preprocessed/sub-brnoCeitec03/anat/sub-brnoCeitec03_flip-1_mt-on_space-other_MTS.json index b0e4ed2b49..402a000299 100644 --- a/derivatives/data_preprocessed/sub-brnoCeitec03/anat/sub-brnoCeitec03_flip-1_mt-on_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-brnoCeitec03/anat/sub-brnoCeitec03_flip-1_mt-on_space-other_MTS.json @@ -1,65 +1,75 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.219, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma", - "InstitutionName": "CEITEC", - "InstitutionalDepartmentName": "Centrum_neuroved", - "InstitutionAddress": "Kamenice_5_Brno_Moravia_CZ_62500", - "DeviceSerialNumber": "66041", - "StationName": "CEIMR1", - "BodyPartExamined": "CSPINE", - "PatientPosition": "HFS", - "ProcedureStepDescription": "c-spine_CEITEC", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-MT1", - "ProtocolName": "GRE-MT1", - "ScanningSequence": "GR", - "SequenceVariant": "MTC_SP", - "ScanOptions": "MT", - "SequenceName": "_fl3d1", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "DIS2D"], - "SeriesNumber": 7, - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SAR": 0.70998, - "EchoTime": 0.00313, - "RepetitionTime": 0.035, - "FlipAngle": 9, - "PartialFourier": 1, - "BaseResolution": 256, - "ShimSetting": [ - 4181, - -8748, - -6327, - -1313, - 2, - 2025, - 225, - -104 ], - "TxRefAmp": 339.742, - "PhaseResolution": 1, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC7;NC1,2", - "CoilString": "HC7;NC1_2", - "PulseSequenceDetails": "%SiemensSeq%_gre", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 100, - "PhaseEncodingSteps": 255, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 256, - "PixelBandwidth": 260, - "DwellTime": 7.5e-06, - "ImageOrientationPatientDICOM": [ - 1, - -9.94442e-07, - 2.15332e-05, - 1.68225e-08, - 0.998971, - 0.045353 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181125 GCC4.9.2" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 123.219, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma", + "InstitutionName": "CEITEC", + "InstitutionalDepartmentName": "Centrum_neuroved", + "InstitutionAddress": "Kamenice_5_Brno_Moravia_CZ_62500", + "DeviceSerialNumber": "66041", + "StationName": "CEIMR1", + "BodyPartExamined": "CSPINE", + "PatientPosition": "HFS", + "ProcedureStepDescription": "c-spine_CEITEC", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-MT1", + "ProtocolName": "GRE-MT1", + "ScanningSequence": "GR", + "SequenceVariant": "MTC_SP", + "ScanOptions": "MT", + "SequenceName": "_fl3d1", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "DIS2D" + ], + "SeriesNumber": 7, + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SAR": 0.70998, + "EchoTime": 0.00313, + "RepetitionTime": 0.035, + "FlipAngle": 9, + "PartialFourier": 1, + "BaseResolution": 256, + "ShimSetting": [ + 4181, + -8748, + -6327, + -1313, + 2, + 2025, + 225, + -104 + ], + "TxRefAmp": 339.742, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC7;NC1,2", + "CoilString": "HC7;NC1_2", + "PulseSequenceDetails": "%SiemensSeq%_gre", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 255, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "PixelBandwidth": 260, + "DwellTime": 7.5e-06, + "ImageOrientationPatientDICOM": [ + 1, + -9.94442e-07, + 2.15332e-05, + 1.68225e-08, + 0.998971, + 0.045353 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181125 GCC4.9.2", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-brnoCeitec03/anat/sub-brnoCeitec03_flip-2_mt-off_space-other_MTS.json b/derivatives/data_preprocessed/sub-brnoCeitec03/anat/sub-brnoCeitec03_flip-2_mt-off_space-other_MTS.json index f8a78570d8..a4cff93757 100644 --- a/derivatives/data_preprocessed/sub-brnoCeitec03/anat/sub-brnoCeitec03_flip-2_mt-off_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-brnoCeitec03/anat/sub-brnoCeitec03_flip-2_mt-off_space-other_MTS.json @@ -1,64 +1,74 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.219, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma", - "InstitutionName": "CEITEC", - "InstitutionalDepartmentName": "Centrum_neuroved", - "InstitutionAddress": "Kamenice_5_Brno_Moravia_CZ_62500", - "DeviceSerialNumber": "66041", - "StationName": "CEIMR1", - "BodyPartExamined": "CSPINE", - "PatientPosition": "HFS", - "ProcedureStepDescription": "c-spine_CEITEC", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-T1w", - "ProtocolName": "GRE-T1w", - "ScanningSequence": "GR", - "SequenceVariant": "SP", - "SequenceName": "_fl3d1", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "DIS2D"], - "SeriesNumber": 9, - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SAR": 0.0460329, - "EchoTime": 0.00313, - "RepetitionTime": 0.015, - "FlipAngle": 15, - "PartialFourier": 1, - "BaseResolution": 256, - "ShimSetting": [ - 4181, - -8748, - -6327, - -1313, - 2, - 2025, - 225, - -104 ], - "TxRefAmp": 339.742, - "PhaseResolution": 1, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC7;NC1,2", - "CoilString": "HC7;NC1_2", - "PulseSequenceDetails": "%SiemensSeq%_gre", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 100, - "PhaseEncodingSteps": 255, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 256, - "PixelBandwidth": 260, - "DwellTime": 7.5e-06, - "ImageOrientationPatientDICOM": [ - 1, - -9.94442e-07, - 2.15332e-05, - 1.68225e-08, - 0.998971, - 0.045353 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181125 GCC4.9.2" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 123.219, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma", + "InstitutionName": "CEITEC", + "InstitutionalDepartmentName": "Centrum_neuroved", + "InstitutionAddress": "Kamenice_5_Brno_Moravia_CZ_62500", + "DeviceSerialNumber": "66041", + "StationName": "CEIMR1", + "BodyPartExamined": "CSPINE", + "PatientPosition": "HFS", + "ProcedureStepDescription": "c-spine_CEITEC", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-T1w", + "ProtocolName": "GRE-T1w", + "ScanningSequence": "GR", + "SequenceVariant": "SP", + "SequenceName": "_fl3d1", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "DIS2D" + ], + "SeriesNumber": 9, + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SAR": 0.0460329, + "EchoTime": 0.00313, + "RepetitionTime": 0.015, + "FlipAngle": 15, + "PartialFourier": 1, + "BaseResolution": 256, + "ShimSetting": [ + 4181, + -8748, + -6327, + -1313, + 2, + 2025, + 225, + -104 + ], + "TxRefAmp": 339.742, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC7;NC1,2", + "CoilString": "HC7;NC1_2", + "PulseSequenceDetails": "%SiemensSeq%_gre", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 255, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "PixelBandwidth": 260, + "DwellTime": 7.5e-06, + "ImageOrientationPatientDICOM": [ + 1, + -9.94442e-07, + 2.15332e-05, + 1.68225e-08, + 0.998971, + 0.045353 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181125 GCC4.9.2", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-brnoCeitec03/anat/sub-brnoCeitec03_space-other_T1w.json b/derivatives/data_preprocessed/sub-brnoCeitec03/anat/sub-brnoCeitec03_space-other_T1w.json index 6c2c0a561b..b29e488903 100644 --- a/derivatives/data_preprocessed/sub-brnoCeitec03/anat/sub-brnoCeitec03_space-other_T1w.json +++ b/derivatives/data_preprocessed/sub-brnoCeitec03/anat/sub-brnoCeitec03_space-other_T1w.json @@ -1,66 +1,79 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.219, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma", - "InstitutionName": "CEITEC", - "InstitutionalDepartmentName": "Centrum_neuroved", - "InstitutionAddress": "Kamenice_5_Brno_Moravia_CZ_62500", - "DeviceSerialNumber": "66041", - "StationName": "CEIMR1", - "BodyPartExamined": "CSPINE", - "PatientPosition": "HFS", - "ProcedureStepDescription": "c-spine_CEITEC", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "T1w", - "ProtocolName": "T1w", - "ScanningSequence": "GR_IR", - "SequenceVariant": "SK_SP_MP", - "ScanOptions": "IR", - "SequenceName": "_tfl3d1_16", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS3D", "DIS2D"], - "SeriesNumber": 2, - "AcquisitionNumber": 1, - "SliceThickness": 1, - "SAR": 0.0768097, - "EchoTime": 0.00372, - "RepetitionTime": 2, - "InversionTime": 1, - "FlipAngle": 9, - "PartialFourier": 1, - "BaseResolution": 320, - "ShimSetting": [ - 4186, - -8705, - -6389, - 104, - 6, - -135, - -23, - 32 ], - "TxRefAmp": 306.733, - "PhaseResolution": 1, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC1-7;NC1,2", - "CoilString": "HC1-7;NC1_2", - "PulseSequenceDetails": "%SiemensSeq%_tfl", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 81.25, - "PhaseEncodingSteps": 259, - "AcquisitionMatrixPE": 260, - "ReconMatrixPE": 320, - "PixelBandwidth": 150, - "DwellTime": 1.04e-05, - "ImageOrientationPatientDICOM": [ - 0, - 1, - 0, - -0.0209424, - 0, - -0.999781 ], - "InPlanePhaseEncodingDirectionDICOM": "ROW", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181125 GCC4.9.2" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 123.219, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma", + "InstitutionName": "CEITEC", + "InstitutionalDepartmentName": "Centrum_neuroved", + "InstitutionAddress": "Kamenice_5_Brno_Moravia_CZ_62500", + "DeviceSerialNumber": "66041", + "StationName": "CEIMR1", + "BodyPartExamined": "CSPINE", + "PatientPosition": "HFS", + "ProcedureStepDescription": "c-spine_CEITEC", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "T1w", + "ProtocolName": "T1w", + "ScanningSequence": "GR_IR", + "SequenceVariant": "SK_SP_MP", + "ScanOptions": "IR", + "SequenceName": "_tfl3d1_16", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS3D", + "DIS2D" + ], + "SeriesNumber": 2, + "AcquisitionNumber": 1, + "SliceThickness": 1, + "SAR": 0.0768097, + "EchoTime": 0.00372, + "RepetitionTime": 2, + "InversionTime": 1, + "FlipAngle": 9, + "PartialFourier": 1, + "BaseResolution": 320, + "ShimSetting": [ + 4186, + -8705, + -6389, + 104, + 6, + -135, + -23, + 32 + ], + "TxRefAmp": 306.733, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC1-7;NC1,2", + "CoilString": "HC1-7;NC1_2", + "PulseSequenceDetails": "%SiemensSeq%_tfl", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 81.25, + "PhaseEncodingSteps": 259, + "AcquisitionMatrixPE": 260, + "ReconMatrixPE": 320, + "PixelBandwidth": 150, + "DwellTime": 1.04e-05, + "ImageOrientationPatientDICOM": [ + 0, + 1, + 0, + -0.0209424, + 0, + -0.999781 + ], + "InPlanePhaseEncodingDirectionDICOM": "ROW", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181125 GCC4.9.2", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-brnoCeitec03/anat/sub-brnoCeitec03_space-other_T2star.json b/derivatives/data_preprocessed/sub-brnoCeitec03/anat/sub-brnoCeitec03_space-other_T2star.json index f5cfd06dd4..8a9817c714 100644 --- a/derivatives/data_preprocessed/sub-brnoCeitec03/anat/sub-brnoCeitec03_space-other_T2star.json +++ b/derivatives/data_preprocessed/sub-brnoCeitec03/anat/sub-brnoCeitec03_space-other_T2star.json @@ -74,5 +74,9 @@ "InPlanePhaseEncodingDirectionDICOM": "COL", "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20181125 GCC4.9.2", - "AcquisitionDuration": 285.0 + "AcquisitionDuration": 285.0, + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-brnoCeitec03/anat/sub-brnoCeitec03_space-other_T2w.json b/derivatives/data_preprocessed/sub-brnoCeitec03/anat/sub-brnoCeitec03_space-other_T2w.json index 383e40fe03..98e1061f94 100644 --- a/derivatives/data_preprocessed/sub-brnoCeitec03/anat/sub-brnoCeitec03_space-other_T2w.json +++ b/derivatives/data_preprocessed/sub-brnoCeitec03/anat/sub-brnoCeitec03_space-other_T2w.json @@ -1,67 +1,80 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.219, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma", - "InstitutionName": "CEITEC", - "InstitutionalDepartmentName": "Centrum_neuroved", - "InstitutionAddress": "Kamenice_5_Brno_Moravia_CZ_62500", - "DeviceSerialNumber": "66041", - "StationName": "CEIMR1", - "BodyPartExamined": "CSPINE", - "PatientPosition": "HFS", - "ProcedureStepDescription": "c-spine_CEITEC", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "T2w", - "ProtocolName": "T2w", - "ScanningSequence": "SE", - "SequenceVariant": "SK_SP_OSP", - "ScanOptions": "PFP", - "SequenceName": "_spcR_100", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS3D", "DIS2D"], - "SeriesNumber": 5, - "AcquisitionNumber": 1, - "SliceThickness": 0.8, - "SAR": 0.717835, - "EchoTime": 0.12, - "RepetitionTime": 1.5, - "FlipAngle": 120, - "PartialFourier": 1, - "BaseResolution": 320, - "ShimSetting": [ - 4186, - -8705, - -6389, - 104, - 6, - -135, - -23, - 32 ], - "TxRefAmp": 339.742, - "PhaseResolution": 1, - "PhaseOversampling": 0.8, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC5-7;NC1,2", - "CoilString": "HC5-7;NC1_2", - "PulseSequenceDetails": "%SiemensSeq%_tse_vfl", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 100, - "EchoTrainLength": 76, - "PhaseEncodingSteps": 422, - "AcquisitionMatrixPE": 320, - "ReconMatrixPE": 320, - "PixelBandwidth": 625, - "DwellTime": 2.5e-06, - "ImageOrientationPatientDICOM": [ - 1.28e-13, - 1, - 4.895e-12, - -0.0261769, - 4.897e-12, - -0.999657 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181125 GCC4.9.2" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 123.219, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma", + "InstitutionName": "CEITEC", + "InstitutionalDepartmentName": "Centrum_neuroved", + "InstitutionAddress": "Kamenice_5_Brno_Moravia_CZ_62500", + "DeviceSerialNumber": "66041", + "StationName": "CEIMR1", + "BodyPartExamined": "CSPINE", + "PatientPosition": "HFS", + "ProcedureStepDescription": "c-spine_CEITEC", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "T2w", + "ProtocolName": "T2w", + "ScanningSequence": "SE", + "SequenceVariant": "SK_SP_OSP", + "ScanOptions": "PFP", + "SequenceName": "_spcR_100", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS3D", + "DIS2D" + ], + "SeriesNumber": 5, + "AcquisitionNumber": 1, + "SliceThickness": 0.8, + "SAR": 0.717835, + "EchoTime": 0.12, + "RepetitionTime": 1.5, + "FlipAngle": 120, + "PartialFourier": 1, + "BaseResolution": 320, + "ShimSetting": [ + 4186, + -8705, + -6389, + 104, + 6, + -135, + -23, + 32 + ], + "TxRefAmp": 339.742, + "PhaseResolution": 1, + "PhaseOversampling": 0.8, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC5-7;NC1,2", + "CoilString": "HC5-7;NC1_2", + "PulseSequenceDetails": "%SiemensSeq%_tse_vfl", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "EchoTrainLength": 76, + "PhaseEncodingSteps": 422, + "AcquisitionMatrixPE": 320, + "ReconMatrixPE": 320, + "PixelBandwidth": 625, + "DwellTime": 2.5e-06, + "ImageOrientationPatientDICOM": [ + 1.28e-13, + 1, + 4.895e-12, + -0.0261769, + 4.897e-12, + -0.999657 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181125 GCC4.9.2", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-brnoCeitec04/anat/sub-brnoCeitec04_flip-1_mt-on_space-other_MTS.json b/derivatives/data_preprocessed/sub-brnoCeitec04/anat/sub-brnoCeitec04_flip-1_mt-on_space-other_MTS.json index b95a82fc30..d02d9288a3 100644 --- a/derivatives/data_preprocessed/sub-brnoCeitec04/anat/sub-brnoCeitec04_flip-1_mt-on_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-brnoCeitec04/anat/sub-brnoCeitec04_flip-1_mt-on_space-other_MTS.json @@ -1,65 +1,75 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.219, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma", - "InstitutionName": "CEITEC", - "InstitutionalDepartmentName": "Centrum_neuroved", - "InstitutionAddress": "Kamenice_5_Brno_Moravia_CZ_62500", - "DeviceSerialNumber": "66041", - "StationName": "CEIMR1", - "BodyPartExamined": "CSPINE", - "PatientPosition": "HFS", - "ProcedureStepDescription": "c-spine_CEITEC", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-MT1", - "ProtocolName": "GRE-MT1", - "ScanningSequence": "GR", - "SequenceVariant": "MTC_SP", - "ScanOptions": "MT", - "SequenceName": "_fl3d1", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "DIS2D"], - "SeriesNumber": 7, - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SAR": 0.466193, - "EchoTime": 0.00313, - "RepetitionTime": 0.035, - "FlipAngle": 9, - "PartialFourier": 1, - "BaseResolution": 256, - "ShimSetting": [ - 4164, - -8695, - -6292, - -1328, - 162, - 2284, - -502, - -247 ], - "TxRefAmp": 254.845, - "PhaseResolution": 1, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC5-7;NC1,2", - "CoilString": "HC5-7;NC1_2", - "PulseSequenceDetails": "%SiemensSeq%_gre", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 100, - "PhaseEncodingSteps": 255, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 256, - "PixelBandwidth": 260, - "DwellTime": 7.5e-06, - "ImageOrientationPatientDICOM": [ - 0.999428, - 0.00587119, - -0.0333004, - -3.32621e-08, - 0.984811, - 0.173631 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181125 GCC4.9.2" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 123.219, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma", + "InstitutionName": "CEITEC", + "InstitutionalDepartmentName": "Centrum_neuroved", + "InstitutionAddress": "Kamenice_5_Brno_Moravia_CZ_62500", + "DeviceSerialNumber": "66041", + "StationName": "CEIMR1", + "BodyPartExamined": "CSPINE", + "PatientPosition": "HFS", + "ProcedureStepDescription": "c-spine_CEITEC", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-MT1", + "ProtocolName": "GRE-MT1", + "ScanningSequence": "GR", + "SequenceVariant": "MTC_SP", + "ScanOptions": "MT", + "SequenceName": "_fl3d1", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "DIS2D" + ], + "SeriesNumber": 7, + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SAR": 0.466193, + "EchoTime": 0.00313, + "RepetitionTime": 0.035, + "FlipAngle": 9, + "PartialFourier": 1, + "BaseResolution": 256, + "ShimSetting": [ + 4164, + -8695, + -6292, + -1328, + 162, + 2284, + -502, + -247 + ], + "TxRefAmp": 254.845, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC5-7;NC1,2", + "CoilString": "HC5-7;NC1_2", + "PulseSequenceDetails": "%SiemensSeq%_gre", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 255, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "PixelBandwidth": 260, + "DwellTime": 7.5e-06, + "ImageOrientationPatientDICOM": [ + 0.999428, + 0.00587119, + -0.0333004, + -3.32621e-08, + 0.984811, + 0.173631 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181125 GCC4.9.2", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-brnoCeitec04/anat/sub-brnoCeitec04_flip-2_mt-off_space-other_MTS.json b/derivatives/data_preprocessed/sub-brnoCeitec04/anat/sub-brnoCeitec04_flip-2_mt-off_space-other_MTS.json index 02865eb964..d895dcbd5f 100644 --- a/derivatives/data_preprocessed/sub-brnoCeitec04/anat/sub-brnoCeitec04_flip-2_mt-off_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-brnoCeitec04/anat/sub-brnoCeitec04_flip-2_mt-off_space-other_MTS.json @@ -1,64 +1,74 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.219, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma", - "InstitutionName": "CEITEC", - "InstitutionalDepartmentName": "Centrum_neuroved", - "InstitutionAddress": "Kamenice_5_Brno_Moravia_CZ_62500", - "DeviceSerialNumber": "66041", - "StationName": "CEIMR1", - "BodyPartExamined": "CSPINE", - "PatientPosition": "HFS", - "ProcedureStepDescription": "c-spine_CEITEC", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-T1w", - "ProtocolName": "GRE-T1w", - "ScanningSequence": "GR", - "SequenceVariant": "SP", - "SequenceName": "_fl3d1", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "DIS2D"], - "SeriesNumber": 10, - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SAR": 0.0302265, - "EchoTime": 0.00313, - "RepetitionTime": 0.015, - "FlipAngle": 15, - "PartialFourier": 1, - "BaseResolution": 256, - "ShimSetting": [ - 4164, - -8695, - -6292, - -1328, - 162, - 2284, - -502, - -247 ], - "TxRefAmp": 254.845, - "PhaseResolution": 1, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC5-7;NC1,2", - "CoilString": "HC5-7;NC1_2", - "PulseSequenceDetails": "%SiemensSeq%_gre", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 100, - "PhaseEncodingSteps": 255, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 256, - "PixelBandwidth": 260, - "DwellTime": 7.5e-06, - "ImageOrientationPatientDICOM": [ - 0.999428, - 0.00587119, - -0.0333004, - -3.32621e-08, - 0.984811, - 0.173631 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181125 GCC4.9.2" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 123.219, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma", + "InstitutionName": "CEITEC", + "InstitutionalDepartmentName": "Centrum_neuroved", + "InstitutionAddress": "Kamenice_5_Brno_Moravia_CZ_62500", + "DeviceSerialNumber": "66041", + "StationName": "CEIMR1", + "BodyPartExamined": "CSPINE", + "PatientPosition": "HFS", + "ProcedureStepDescription": "c-spine_CEITEC", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-T1w", + "ProtocolName": "GRE-T1w", + "ScanningSequence": "GR", + "SequenceVariant": "SP", + "SequenceName": "_fl3d1", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "DIS2D" + ], + "SeriesNumber": 10, + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SAR": 0.0302265, + "EchoTime": 0.00313, + "RepetitionTime": 0.015, + "FlipAngle": 15, + "PartialFourier": 1, + "BaseResolution": 256, + "ShimSetting": [ + 4164, + -8695, + -6292, + -1328, + 162, + 2284, + -502, + -247 + ], + "TxRefAmp": 254.845, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC5-7;NC1,2", + "CoilString": "HC5-7;NC1_2", + "PulseSequenceDetails": "%SiemensSeq%_gre", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 255, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "PixelBandwidth": 260, + "DwellTime": 7.5e-06, + "ImageOrientationPatientDICOM": [ + 0.999428, + 0.00587119, + -0.0333004, + -3.32621e-08, + 0.984811, + 0.173631 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181125 GCC4.9.2", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-brnoCeitec04/anat/sub-brnoCeitec04_space-other_T1w.json b/derivatives/data_preprocessed/sub-brnoCeitec04/anat/sub-brnoCeitec04_space-other_T1w.json index 7dc18cf02b..d59642affd 100644 --- a/derivatives/data_preprocessed/sub-brnoCeitec04/anat/sub-brnoCeitec04_space-other_T1w.json +++ b/derivatives/data_preprocessed/sub-brnoCeitec04/anat/sub-brnoCeitec04_space-other_T1w.json @@ -1,66 +1,79 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.219, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma", - "InstitutionName": "CEITEC", - "InstitutionalDepartmentName": "Centrum_neuroved", - "InstitutionAddress": "Kamenice_5_Brno_Moravia_CZ_62500", - "DeviceSerialNumber": "66041", - "StationName": "CEIMR1", - "BodyPartExamined": "CSPINE", - "PatientPosition": "HFS", - "ProcedureStepDescription": "c-spine_CEITEC", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "T1w", - "ProtocolName": "T1w", - "ScanningSequence": "GR_IR", - "SequenceVariant": "SK_SP_MP", - "ScanOptions": "IR", - "SequenceName": "_tfl3d1_16", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS3D", "DIS2D"], - "SeriesNumber": 2, - "AcquisitionNumber": 1, - "SliceThickness": 1, - "SAR": 0.0527245, - "EchoTime": 0.00372, - "RepetitionTime": 2, - "InversionTime": 1, - "FlipAngle": 9, - "PartialFourier": 1, - "BaseResolution": 320, - "ShimSetting": [ - 4186, - -8705, - -6389, - 104, - 6, - -135, - -23, - 32 ], - "TxRefAmp": 239.034, - "PhaseResolution": 1, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC1-7;NC1,2", - "CoilString": "HC1-7;NC1_2", - "PulseSequenceDetails": "%SiemensSeq%_tfl", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 81.25, - "PhaseEncodingSteps": 259, - "AcquisitionMatrixPE": 260, - "ReconMatrixPE": 320, - "PixelBandwidth": 150, - "DwellTime": 1.04e-05, - "ImageOrientationPatientDICOM": [ - 0, - 1, - 0, - -0.0366437, - 0, - -0.999328 ], - "InPlanePhaseEncodingDirectionDICOM": "ROW", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181125 GCC4.9.2" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 123.219, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma", + "InstitutionName": "CEITEC", + "InstitutionalDepartmentName": "Centrum_neuroved", + "InstitutionAddress": "Kamenice_5_Brno_Moravia_CZ_62500", + "DeviceSerialNumber": "66041", + "StationName": "CEIMR1", + "BodyPartExamined": "CSPINE", + "PatientPosition": "HFS", + "ProcedureStepDescription": "c-spine_CEITEC", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "T1w", + "ProtocolName": "T1w", + "ScanningSequence": "GR_IR", + "SequenceVariant": "SK_SP_MP", + "ScanOptions": "IR", + "SequenceName": "_tfl3d1_16", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS3D", + "DIS2D" + ], + "SeriesNumber": 2, + "AcquisitionNumber": 1, + "SliceThickness": 1, + "SAR": 0.0527245, + "EchoTime": 0.00372, + "RepetitionTime": 2, + "InversionTime": 1, + "FlipAngle": 9, + "PartialFourier": 1, + "BaseResolution": 320, + "ShimSetting": [ + 4186, + -8705, + -6389, + 104, + 6, + -135, + -23, + 32 + ], + "TxRefAmp": 239.034, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC1-7;NC1,2", + "CoilString": "HC1-7;NC1_2", + "PulseSequenceDetails": "%SiemensSeq%_tfl", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 81.25, + "PhaseEncodingSteps": 259, + "AcquisitionMatrixPE": 260, + "ReconMatrixPE": 320, + "PixelBandwidth": 150, + "DwellTime": 1.04e-05, + "ImageOrientationPatientDICOM": [ + 0, + 1, + 0, + -0.0366437, + 0, + -0.999328 + ], + "InPlanePhaseEncodingDirectionDICOM": "ROW", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181125 GCC4.9.2", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-brnoCeitec04/anat/sub-brnoCeitec04_space-other_T2star.json b/derivatives/data_preprocessed/sub-brnoCeitec04/anat/sub-brnoCeitec04_space-other_T2star.json index 455535eb62..dcfc394262 100644 --- a/derivatives/data_preprocessed/sub-brnoCeitec04/anat/sub-brnoCeitec04_space-other_T2star.json +++ b/derivatives/data_preprocessed/sub-brnoCeitec04/anat/sub-brnoCeitec04_space-other_T2star.json @@ -74,5 +74,9 @@ "InPlanePhaseEncodingDirectionDICOM": "COL", "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20181125 GCC4.9.2", - "AcquisitionDuration": 285.0 + "AcquisitionDuration": 285.0, + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-brnoCeitec04/anat/sub-brnoCeitec04_space-other_T2w.json b/derivatives/data_preprocessed/sub-brnoCeitec04/anat/sub-brnoCeitec04_space-other_T2w.json index ad48851278..f6da6d0037 100644 --- a/derivatives/data_preprocessed/sub-brnoCeitec04/anat/sub-brnoCeitec04_space-other_T2w.json +++ b/derivatives/data_preprocessed/sub-brnoCeitec04/anat/sub-brnoCeitec04_space-other_T2w.json @@ -1,67 +1,80 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.219, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma", - "InstitutionName": "CEITEC", - "InstitutionalDepartmentName": "Centrum_neuroved", - "InstitutionAddress": "Kamenice_5_Brno_Moravia_CZ_62500", - "DeviceSerialNumber": "66041", - "StationName": "CEIMR1", - "BodyPartExamined": "CSPINE", - "PatientPosition": "HFS", - "ProcedureStepDescription": "c-spine_CEITEC", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "T2w", - "ProtocolName": "T2w", - "ScanningSequence": "SE", - "SequenceVariant": "SK_SP_OSP", - "ScanOptions": "PFP", - "SequenceName": "_spcR_100", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS3D", "DIS2D"], - "SeriesNumber": 5, - "AcquisitionNumber": 1, - "SliceThickness": 0.8, - "SAR": 0.471351, - "EchoTime": 0.12, - "RepetitionTime": 1.5, - "FlipAngle": 120, - "PartialFourier": 1, - "BaseResolution": 320, - "ShimSetting": [ - 4186, - -8705, - -6389, - 104, - 6, - -135, - -23, - 32 ], - "TxRefAmp": 254.845, - "PhaseResolution": 1, - "PhaseOversampling": 0.8, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC5-7;NC1,2", - "CoilString": "HC5-7;NC1_2", - "PulseSequenceDetails": "%SiemensSeq%_tse_vfl", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 100, - "EchoTrainLength": 76, - "PhaseEncodingSteps": 422, - "AcquisitionMatrixPE": 320, - "ReconMatrixPE": 320, - "PixelBandwidth": 625, - "DwellTime": 2.5e-06, - "ImageOrientationPatientDICOM": [ - 1.79e-13, - 1, - 4.893e-12, - -0.0366437, - 4.897e-12, - -0.999328 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181125 GCC4.9.2" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 123.219, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma", + "InstitutionName": "CEITEC", + "InstitutionalDepartmentName": "Centrum_neuroved", + "InstitutionAddress": "Kamenice_5_Brno_Moravia_CZ_62500", + "DeviceSerialNumber": "66041", + "StationName": "CEIMR1", + "BodyPartExamined": "CSPINE", + "PatientPosition": "HFS", + "ProcedureStepDescription": "c-spine_CEITEC", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "T2w", + "ProtocolName": "T2w", + "ScanningSequence": "SE", + "SequenceVariant": "SK_SP_OSP", + "ScanOptions": "PFP", + "SequenceName": "_spcR_100", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS3D", + "DIS2D" + ], + "SeriesNumber": 5, + "AcquisitionNumber": 1, + "SliceThickness": 0.8, + "SAR": 0.471351, + "EchoTime": 0.12, + "RepetitionTime": 1.5, + "FlipAngle": 120, + "PartialFourier": 1, + "BaseResolution": 320, + "ShimSetting": [ + 4186, + -8705, + -6389, + 104, + 6, + -135, + -23, + 32 + ], + "TxRefAmp": 254.845, + "PhaseResolution": 1, + "PhaseOversampling": 0.8, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC5-7;NC1,2", + "CoilString": "HC5-7;NC1_2", + "PulseSequenceDetails": "%SiemensSeq%_tse_vfl", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "EchoTrainLength": 76, + "PhaseEncodingSteps": 422, + "AcquisitionMatrixPE": 320, + "ReconMatrixPE": 320, + "PixelBandwidth": 625, + "DwellTime": 2.5e-06, + "ImageOrientationPatientDICOM": [ + 1.79e-13, + 1, + 4.893e-12, + -0.0366437, + 4.897e-12, + -0.999328 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181125 GCC4.9.2", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-brnoCeitec05/anat/sub-brnoCeitec05_flip-1_mt-on_space-other_MTS.json b/derivatives/data_preprocessed/sub-brnoCeitec05/anat/sub-brnoCeitec05_flip-1_mt-on_space-other_MTS.json index edd759465e..725eb9c343 100644 --- a/derivatives/data_preprocessed/sub-brnoCeitec05/anat/sub-brnoCeitec05_flip-1_mt-on_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-brnoCeitec05/anat/sub-brnoCeitec05_flip-1_mt-on_space-other_MTS.json @@ -1,65 +1,75 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.219, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma", - "InstitutionName": "CEITEC", - "InstitutionalDepartmentName": "Centrum_neuroved", - "InstitutionAddress": "Kamenice_5_Brno_Moravia_CZ_62500", - "DeviceSerialNumber": "66041", - "StationName": "CEIMR1", - "BodyPartExamined": "CSPINE", - "PatientPosition": "HFS", - "ProcedureStepDescription": "c-spine_CEITEC", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-MT1", - "ProtocolName": "GRE-MT1", - "ScanningSequence": "GR", - "SequenceVariant": "MTC_SP", - "ScanOptions": "MT", - "SequenceName": "_fl3d1", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "DIS2D"], - "SeriesNumber": 7, - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SAR": 0.533199, - "EchoTime": 0.00313, - "RepetitionTime": 0.035, - "FlipAngle": 9, - "PartialFourier": 1, - "BaseResolution": 256, - "ShimSetting": [ - 4096, - -8751, - -6261, - -1347, - -331, - 2521, - 14, - -12 ], - "TxRefAmp": 266.159, - "PhaseResolution": 1, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC5-7;NC1,2", - "CoilString": "HC5-7;NC1_2", - "PulseSequenceDetails": "%SiemensSeq%_gre", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 100, - "PhaseEncodingSteps": 255, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 256, - "PixelBandwidth": 260, - "DwellTime": 7.5e-06, - "ImageOrientationPatientDICOM": [ - 0.995833, - -0.0172774, - 0.089548, - -3.22478e-08, - 0.981891, - 0.189447 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181125 GCC4.9.2" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 123.219, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma", + "InstitutionName": "CEITEC", + "InstitutionalDepartmentName": "Centrum_neuroved", + "InstitutionAddress": "Kamenice_5_Brno_Moravia_CZ_62500", + "DeviceSerialNumber": "66041", + "StationName": "CEIMR1", + "BodyPartExamined": "CSPINE", + "PatientPosition": "HFS", + "ProcedureStepDescription": "c-spine_CEITEC", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-MT1", + "ProtocolName": "GRE-MT1", + "ScanningSequence": "GR", + "SequenceVariant": "MTC_SP", + "ScanOptions": "MT", + "SequenceName": "_fl3d1", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "DIS2D" + ], + "SeriesNumber": 7, + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SAR": 0.533199, + "EchoTime": 0.00313, + "RepetitionTime": 0.035, + "FlipAngle": 9, + "PartialFourier": 1, + "BaseResolution": 256, + "ShimSetting": [ + 4096, + -8751, + -6261, + -1347, + -331, + 2521, + 14, + -12 + ], + "TxRefAmp": 266.159, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC5-7;NC1,2", + "CoilString": "HC5-7;NC1_2", + "PulseSequenceDetails": "%SiemensSeq%_gre", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 255, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "PixelBandwidth": 260, + "DwellTime": 7.5e-06, + "ImageOrientationPatientDICOM": [ + 0.995833, + -0.0172774, + 0.089548, + -3.22478e-08, + 0.981891, + 0.189447 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181125 GCC4.9.2", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-brnoCeitec05/anat/sub-brnoCeitec05_flip-2_mt-off_space-other_MTS.json b/derivatives/data_preprocessed/sub-brnoCeitec05/anat/sub-brnoCeitec05_flip-2_mt-off_space-other_MTS.json index 25f3884296..f01d13b490 100644 --- a/derivatives/data_preprocessed/sub-brnoCeitec05/anat/sub-brnoCeitec05_flip-2_mt-off_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-brnoCeitec05/anat/sub-brnoCeitec05_flip-2_mt-off_space-other_MTS.json @@ -1,64 +1,74 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.219, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma", - "InstitutionName": "CEITEC", - "InstitutionalDepartmentName": "Centrum_neuroved", - "InstitutionAddress": "Kamenice_5_Brno_Moravia_CZ_62500", - "DeviceSerialNumber": "66041", - "StationName": "CEIMR1", - "BodyPartExamined": "CSPINE", - "PatientPosition": "HFS", - "ProcedureStepDescription": "c-spine_CEITEC", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-T1w", - "ProtocolName": "GRE-T1w", - "ScanningSequence": "GR", - "SequenceVariant": "SP", - "SequenceName": "_fl3d1", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "DIS2D"], - "SeriesNumber": 9, - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SAR": 0.034571, - "EchoTime": 0.00313, - "RepetitionTime": 0.015, - "FlipAngle": 15, - "PartialFourier": 1, - "BaseResolution": 256, - "ShimSetting": [ - 4096, - -8751, - -6261, - -1347, - -331, - 2521, - 14, - -12 ], - "TxRefAmp": 266.159, - "PhaseResolution": 1, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC5-7;NC1,2", - "CoilString": "HC5-7;NC1_2", - "PulseSequenceDetails": "%SiemensSeq%_gre", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 100, - "PhaseEncodingSteps": 255, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 256, - "PixelBandwidth": 260, - "DwellTime": 7.5e-06, - "ImageOrientationPatientDICOM": [ - 0.995833, - -0.0172774, - 0.089548, - -3.22478e-08, - 0.981891, - 0.189447 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181125 GCC4.9.2" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 123.219, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma", + "InstitutionName": "CEITEC", + "InstitutionalDepartmentName": "Centrum_neuroved", + "InstitutionAddress": "Kamenice_5_Brno_Moravia_CZ_62500", + "DeviceSerialNumber": "66041", + "StationName": "CEIMR1", + "BodyPartExamined": "CSPINE", + "PatientPosition": "HFS", + "ProcedureStepDescription": "c-spine_CEITEC", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-T1w", + "ProtocolName": "GRE-T1w", + "ScanningSequence": "GR", + "SequenceVariant": "SP", + "SequenceName": "_fl3d1", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "DIS2D" + ], + "SeriesNumber": 9, + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SAR": 0.034571, + "EchoTime": 0.00313, + "RepetitionTime": 0.015, + "FlipAngle": 15, + "PartialFourier": 1, + "BaseResolution": 256, + "ShimSetting": [ + 4096, + -8751, + -6261, + -1347, + -331, + 2521, + 14, + -12 + ], + "TxRefAmp": 266.159, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC5-7;NC1,2", + "CoilString": "HC5-7;NC1_2", + "PulseSequenceDetails": "%SiemensSeq%_gre", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 255, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "PixelBandwidth": 260, + "DwellTime": 7.5e-06, + "ImageOrientationPatientDICOM": [ + 0.995833, + -0.0172774, + 0.089548, + -3.22478e-08, + 0.981891, + 0.189447 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181125 GCC4.9.2", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-brnoCeitec05/anat/sub-brnoCeitec05_space-other_T1w.json b/derivatives/data_preprocessed/sub-brnoCeitec05/anat/sub-brnoCeitec05_space-other_T1w.json index dc1436ea38..98fb46c41d 100644 --- a/derivatives/data_preprocessed/sub-brnoCeitec05/anat/sub-brnoCeitec05_space-other_T1w.json +++ b/derivatives/data_preprocessed/sub-brnoCeitec05/anat/sub-brnoCeitec05_space-other_T1w.json @@ -1,66 +1,79 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.219, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma", - "InstitutionName": "CEITEC", - "InstitutionalDepartmentName": "Centrum_neuroved", - "InstitutionAddress": "Kamenice_5_Brno_Moravia_CZ_62500", - "DeviceSerialNumber": "66041", - "StationName": "CEIMR1", - "BodyPartExamined": "CSPINE", - "PatientPosition": "HFS", - "ProcedureStepDescription": "c-spine_CEITEC", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "T1w", - "ProtocolName": "T1w", - "ScanningSequence": "GR_IR", - "SequenceVariant": "SK_SP_MP", - "ScanOptions": "IR", - "SequenceName": "_tfl3d1_16", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS3D", "DIS2D"], - "SeriesNumber": 2, - "AcquisitionNumber": 1, - "SliceThickness": 1, - "SAR": 0.0567093, - "EchoTime": 0.00372, - "RepetitionTime": 2, - "InversionTime": 1, - "FlipAngle": 9, - "PartialFourier": 1, - "BaseResolution": 320, - "ShimSetting": [ - 4186, - -8705, - -6389, - 104, - 6, - -135, - -23, - 32 ], - "TxRefAmp": 241.718, - "PhaseResolution": 1, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC1-7;NC1,2", - "CoilString": "HC1-7;NC1_2", - "PulseSequenceDetails": "%SiemensSeq%_tfl", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 81.25, - "PhaseEncodingSteps": 259, - "AcquisitionMatrixPE": 260, - "ReconMatrixPE": 320, - "PixelBandwidth": 150, - "DwellTime": 1.04e-05, - "ImageOrientationPatientDICOM": [ - 0, - 1, - 0, - 0.0680153, - 0, - -0.997684 ], - "InPlanePhaseEncodingDirectionDICOM": "ROW", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181125 GCC4.9.2" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 123.219, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma", + "InstitutionName": "CEITEC", + "InstitutionalDepartmentName": "Centrum_neuroved", + "InstitutionAddress": "Kamenice_5_Brno_Moravia_CZ_62500", + "DeviceSerialNumber": "66041", + "StationName": "CEIMR1", + "BodyPartExamined": "CSPINE", + "PatientPosition": "HFS", + "ProcedureStepDescription": "c-spine_CEITEC", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "T1w", + "ProtocolName": "T1w", + "ScanningSequence": "GR_IR", + "SequenceVariant": "SK_SP_MP", + "ScanOptions": "IR", + "SequenceName": "_tfl3d1_16", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS3D", + "DIS2D" + ], + "SeriesNumber": 2, + "AcquisitionNumber": 1, + "SliceThickness": 1, + "SAR": 0.0567093, + "EchoTime": 0.00372, + "RepetitionTime": 2, + "InversionTime": 1, + "FlipAngle": 9, + "PartialFourier": 1, + "BaseResolution": 320, + "ShimSetting": [ + 4186, + -8705, + -6389, + 104, + 6, + -135, + -23, + 32 + ], + "TxRefAmp": 241.718, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC1-7;NC1,2", + "CoilString": "HC1-7;NC1_2", + "PulseSequenceDetails": "%SiemensSeq%_tfl", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 81.25, + "PhaseEncodingSteps": 259, + "AcquisitionMatrixPE": 260, + "ReconMatrixPE": 320, + "PixelBandwidth": 150, + "DwellTime": 1.04e-05, + "ImageOrientationPatientDICOM": [ + 0, + 1, + 0, + 0.0680153, + 0, + -0.997684 + ], + "InPlanePhaseEncodingDirectionDICOM": "ROW", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181125 GCC4.9.2", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-brnoCeitec05/anat/sub-brnoCeitec05_space-other_T2star.json b/derivatives/data_preprocessed/sub-brnoCeitec05/anat/sub-brnoCeitec05_space-other_T2star.json index 3d7046ad2d..9ebc679a30 100644 --- a/derivatives/data_preprocessed/sub-brnoCeitec05/anat/sub-brnoCeitec05_space-other_T2star.json +++ b/derivatives/data_preprocessed/sub-brnoCeitec05/anat/sub-brnoCeitec05_space-other_T2star.json @@ -74,5 +74,9 @@ "InPlanePhaseEncodingDirectionDICOM": "COL", "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20181125 GCC4.9.2", - "AcquisitionDuration": 285.0 + "AcquisitionDuration": 285.0, + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-brnoCeitec05/anat/sub-brnoCeitec05_space-other_T2w.json b/derivatives/data_preprocessed/sub-brnoCeitec05/anat/sub-brnoCeitec05_space-other_T2w.json index c9ca07e44a..1ea844318d 100644 --- a/derivatives/data_preprocessed/sub-brnoCeitec05/anat/sub-brnoCeitec05_space-other_T2w.json +++ b/derivatives/data_preprocessed/sub-brnoCeitec05/anat/sub-brnoCeitec05_space-other_T2w.json @@ -1,67 +1,80 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.219, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma", - "InstitutionName": "CEITEC", - "InstitutionalDepartmentName": "Centrum_neuroved", - "InstitutionAddress": "Kamenice_5_Brno_Moravia_CZ_62500", - "DeviceSerialNumber": "66041", - "StationName": "CEIMR1", - "BodyPartExamined": "CSPINE", - "PatientPosition": "HFS", - "ProcedureStepDescription": "c-spine_CEITEC", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "T2w", - "ProtocolName": "T2w", - "ScanningSequence": "SE", - "SequenceVariant": "SK_SP_OSP", - "ScanOptions": "PFP", - "SequenceName": "_spcR_100", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS3D", "DIS2D"], - "SeriesNumber": 5, - "AcquisitionNumber": 1, - "SliceThickness": 0.8, - "SAR": 0.539098, - "EchoTime": 0.12, - "RepetitionTime": 1.5, - "FlipAngle": 120, - "PartialFourier": 1, - "BaseResolution": 320, - "ShimSetting": [ - 4186, - -8705, - -6389, - 104, - 6, - -135, - -23, - 32 ], - "TxRefAmp": 266.159, - "PhaseResolution": 1, - "PhaseOversampling": 0.8, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC5-7;NC1,2", - "CoilString": "HC5-7;NC1_2", - "PulseSequenceDetails": "%SiemensSeq%_tse_vfl", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 100, - "EchoTrainLength": 76, - "PhaseEncodingSteps": 422, - "AcquisitionMatrixPE": 320, - "ReconMatrixPE": 320, - "PixelBandwidth": 625, - "DwellTime": 2.5e-06, - "ImageOrientationPatientDICOM": [ - -2.82e-13, - 1, - 4.888e-12, - 0.0575641, - 4.897e-12, - -0.998342 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181125 GCC4.9.2" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 123.219, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma", + "InstitutionName": "CEITEC", + "InstitutionalDepartmentName": "Centrum_neuroved", + "InstitutionAddress": "Kamenice_5_Brno_Moravia_CZ_62500", + "DeviceSerialNumber": "66041", + "StationName": "CEIMR1", + "BodyPartExamined": "CSPINE", + "PatientPosition": "HFS", + "ProcedureStepDescription": "c-spine_CEITEC", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "T2w", + "ProtocolName": "T2w", + "ScanningSequence": "SE", + "SequenceVariant": "SK_SP_OSP", + "ScanOptions": "PFP", + "SequenceName": "_spcR_100", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS3D", + "DIS2D" + ], + "SeriesNumber": 5, + "AcquisitionNumber": 1, + "SliceThickness": 0.8, + "SAR": 0.539098, + "EchoTime": 0.12, + "RepetitionTime": 1.5, + "FlipAngle": 120, + "PartialFourier": 1, + "BaseResolution": 320, + "ShimSetting": [ + 4186, + -8705, + -6389, + 104, + 6, + -135, + -23, + 32 + ], + "TxRefAmp": 266.159, + "PhaseResolution": 1, + "PhaseOversampling": 0.8, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC5-7;NC1,2", + "CoilString": "HC5-7;NC1_2", + "PulseSequenceDetails": "%SiemensSeq%_tse_vfl", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "EchoTrainLength": 76, + "PhaseEncodingSteps": 422, + "AcquisitionMatrixPE": 320, + "ReconMatrixPE": 320, + "PixelBandwidth": 625, + "DwellTime": 2.5e-06, + "ImageOrientationPatientDICOM": [ + -2.82e-13, + 1, + 4.888e-12, + 0.0575641, + 4.897e-12, + -0.998342 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181125 GCC4.9.2", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-brnoCeitec06/anat/sub-brnoCeitec06_flip-1_mt-on_space-other_MTS.json b/derivatives/data_preprocessed/sub-brnoCeitec06/anat/sub-brnoCeitec06_flip-1_mt-on_space-other_MTS.json index ad233bca07..b1cbfe20b8 100644 --- a/derivatives/data_preprocessed/sub-brnoCeitec06/anat/sub-brnoCeitec06_flip-1_mt-on_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-brnoCeitec06/anat/sub-brnoCeitec06_flip-1_mt-on_space-other_MTS.json @@ -1,65 +1,75 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.219, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma", - "InstitutionName": "CEITEC", - "InstitutionalDepartmentName": "Centrum_neuroved", - "InstitutionAddress": "Kamenice_5_Brno_Moravia_CZ_62500", - "DeviceSerialNumber": "66041", - "StationName": "CEIMR1", - "BodyPartExamined": "CSPINE", - "PatientPosition": "HFS", - "ProcedureStepDescription": "c-spine_CEITEC", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-MT1", - "ProtocolName": "GRE-MT1", - "ScanningSequence": "GR", - "SequenceVariant": "MTC_SP", - "ScanOptions": "MT", - "SequenceName": "_fl3d1", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "DIS2D"], - "SeriesNumber": 7, - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SAR": 0.454146, - "EchoTime": 0.00313, - "RepetitionTime": 0.035, - "FlipAngle": 9, - "PartialFourier": 1, - "BaseResolution": 256, - "ShimSetting": [ - 4169, - -8778, - -6259, - -1549, - -287, - 1885, - -103, - 106 ], - "TxRefAmp": 261.527, - "PhaseResolution": 1, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC7;NC1,2", - "CoilString": "HC7;NC1_2", - "PulseSequenceDetails": "%SiemensSeq%_gre", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 100, - "PhaseEncodingSteps": 255, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 256, - "PixelBandwidth": 260, - "DwellTime": 7.5e-06, - "ImageOrientationPatientDICOM": [ - 1, - 0, - 0, - 0, - 0.997684, - 0.0680153 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181125 GCC4.9.2" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 123.219, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma", + "InstitutionName": "CEITEC", + "InstitutionalDepartmentName": "Centrum_neuroved", + "InstitutionAddress": "Kamenice_5_Brno_Moravia_CZ_62500", + "DeviceSerialNumber": "66041", + "StationName": "CEIMR1", + "BodyPartExamined": "CSPINE", + "PatientPosition": "HFS", + "ProcedureStepDescription": "c-spine_CEITEC", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-MT1", + "ProtocolName": "GRE-MT1", + "ScanningSequence": "GR", + "SequenceVariant": "MTC_SP", + "ScanOptions": "MT", + "SequenceName": "_fl3d1", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "DIS2D" + ], + "SeriesNumber": 7, + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SAR": 0.454146, + "EchoTime": 0.00313, + "RepetitionTime": 0.035, + "FlipAngle": 9, + "PartialFourier": 1, + "BaseResolution": 256, + "ShimSetting": [ + 4169, + -8778, + -6259, + -1549, + -287, + 1885, + -103, + 106 + ], + "TxRefAmp": 261.527, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC7;NC1,2", + "CoilString": "HC7;NC1_2", + "PulseSequenceDetails": "%SiemensSeq%_gre", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 255, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "PixelBandwidth": 260, + "DwellTime": 7.5e-06, + "ImageOrientationPatientDICOM": [ + 1, + 0, + 0, + 0, + 0.997684, + 0.0680153 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181125 GCC4.9.2", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-brnoCeitec06/anat/sub-brnoCeitec06_flip-2_mt-off_space-other_MTS.json b/derivatives/data_preprocessed/sub-brnoCeitec06/anat/sub-brnoCeitec06_flip-2_mt-off_space-other_MTS.json index bef7b28da5..95edb93cbb 100644 --- a/derivatives/data_preprocessed/sub-brnoCeitec06/anat/sub-brnoCeitec06_flip-2_mt-off_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-brnoCeitec06/anat/sub-brnoCeitec06_flip-2_mt-off_space-other_MTS.json @@ -1,64 +1,74 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.219, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma", - "InstitutionName": "CEITEC", - "InstitutionalDepartmentName": "Centrum_neuroved", - "InstitutionAddress": "Kamenice_5_Brno_Moravia_CZ_62500", - "DeviceSerialNumber": "66041", - "StationName": "CEIMR1", - "BodyPartExamined": "CSPINE", - "PatientPosition": "HFS", - "ProcedureStepDescription": "c-spine_CEITEC", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-T1w", - "ProtocolName": "GRE-T1w", - "ScanningSequence": "GR", - "SequenceVariant": "SP", - "SequenceName": "_fl3d1", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "DIS2D"], - "SeriesNumber": 9, - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SAR": 0.0294454, - "EchoTime": 0.00313, - "RepetitionTime": 0.015, - "FlipAngle": 15, - "PartialFourier": 1, - "BaseResolution": 256, - "ShimSetting": [ - 4169, - -8778, - -6259, - -1549, - -287, - 1885, - -103, - 106 ], - "TxRefAmp": 261.527, - "PhaseResolution": 1, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC7;NC1,2", - "CoilString": "HC7;NC1_2", - "PulseSequenceDetails": "%SiemensSeq%_gre", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 100, - "PhaseEncodingSteps": 255, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 256, - "PixelBandwidth": 260, - "DwellTime": 7.5e-06, - "ImageOrientationPatientDICOM": [ - 1, - 0, - 0, - 0, - 0.997684, - 0.0680153 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181125 GCC4.9.2" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 123.219, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma", + "InstitutionName": "CEITEC", + "InstitutionalDepartmentName": "Centrum_neuroved", + "InstitutionAddress": "Kamenice_5_Brno_Moravia_CZ_62500", + "DeviceSerialNumber": "66041", + "StationName": "CEIMR1", + "BodyPartExamined": "CSPINE", + "PatientPosition": "HFS", + "ProcedureStepDescription": "c-spine_CEITEC", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-T1w", + "ProtocolName": "GRE-T1w", + "ScanningSequence": "GR", + "SequenceVariant": "SP", + "SequenceName": "_fl3d1", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "DIS2D" + ], + "SeriesNumber": 9, + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SAR": 0.0294454, + "EchoTime": 0.00313, + "RepetitionTime": 0.015, + "FlipAngle": 15, + "PartialFourier": 1, + "BaseResolution": 256, + "ShimSetting": [ + 4169, + -8778, + -6259, + -1549, + -287, + 1885, + -103, + 106 + ], + "TxRefAmp": 261.527, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC7;NC1,2", + "CoilString": "HC7;NC1_2", + "PulseSequenceDetails": "%SiemensSeq%_gre", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 255, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "PixelBandwidth": 260, + "DwellTime": 7.5e-06, + "ImageOrientationPatientDICOM": [ + 1, + 0, + 0, + 0, + 0.997684, + 0.0680153 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181125 GCC4.9.2", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-brnoCeitec06/anat/sub-brnoCeitec06_space-other_T1w.json b/derivatives/data_preprocessed/sub-brnoCeitec06/anat/sub-brnoCeitec06_space-other_T1w.json index ec97f5847d..e8ece46207 100644 --- a/derivatives/data_preprocessed/sub-brnoCeitec06/anat/sub-brnoCeitec06_space-other_T1w.json +++ b/derivatives/data_preprocessed/sub-brnoCeitec06/anat/sub-brnoCeitec06_space-other_T1w.json @@ -1,66 +1,79 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.219, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma", - "InstitutionName": "CEITEC", - "InstitutionalDepartmentName": "Centrum_neuroved", - "InstitutionAddress": "Kamenice_5_Brno_Moravia_CZ_62500", - "DeviceSerialNumber": "66041", - "StationName": "CEIMR1", - "BodyPartExamined": "CSPINE", - "PatientPosition": "HFS", - "ProcedureStepDescription": "c-spine_CEITEC", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "T1w", - "ProtocolName": "T1w", - "ScanningSequence": "GR_IR", - "SequenceVariant": "SK_SP_MP", - "ScanOptions": "IR", - "SequenceName": "_tfl3d1_16", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS3D", "DIS2D"], - "SeriesNumber": 2, - "AcquisitionNumber": 1, - "SliceThickness": 1, - "SAR": 0.0533824, - "EchoTime": 0.00372, - "RepetitionTime": 2, - "InversionTime": 1, - "FlipAngle": 9, - "PartialFourier": 1, - "BaseResolution": 320, - "ShimSetting": [ - 4186, - -8705, - -6389, - 104, - 6, - -135, - -23, - 32 ], - "TxRefAmp": 248.118, - "PhaseResolution": 1, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC1-7;NC1,2", - "CoilString": "HC1-7;NC1_2", - "PulseSequenceDetails": "%SiemensSeq%_tfl", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 81.25, - "PhaseEncodingSteps": 259, - "AcquisitionMatrixPE": 260, - "ReconMatrixPE": 320, - "PixelBandwidth": 150, - "DwellTime": 1.04e-05, - "ImageOrientationPatientDICOM": [ - 0, - 1, - 0, - 0, - 0, - -1 ], - "InPlanePhaseEncodingDirectionDICOM": "ROW", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181125 GCC4.9.2" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 123.219, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma", + "InstitutionName": "CEITEC", + "InstitutionalDepartmentName": "Centrum_neuroved", + "InstitutionAddress": "Kamenice_5_Brno_Moravia_CZ_62500", + "DeviceSerialNumber": "66041", + "StationName": "CEIMR1", + "BodyPartExamined": "CSPINE", + "PatientPosition": "HFS", + "ProcedureStepDescription": "c-spine_CEITEC", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "T1w", + "ProtocolName": "T1w", + "ScanningSequence": "GR_IR", + "SequenceVariant": "SK_SP_MP", + "ScanOptions": "IR", + "SequenceName": "_tfl3d1_16", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS3D", + "DIS2D" + ], + "SeriesNumber": 2, + "AcquisitionNumber": 1, + "SliceThickness": 1, + "SAR": 0.0533824, + "EchoTime": 0.00372, + "RepetitionTime": 2, + "InversionTime": 1, + "FlipAngle": 9, + "PartialFourier": 1, + "BaseResolution": 320, + "ShimSetting": [ + 4186, + -8705, + -6389, + 104, + 6, + -135, + -23, + 32 + ], + "TxRefAmp": 248.118, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC1-7;NC1,2", + "CoilString": "HC1-7;NC1_2", + "PulseSequenceDetails": "%SiemensSeq%_tfl", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 81.25, + "PhaseEncodingSteps": 259, + "AcquisitionMatrixPE": 260, + "ReconMatrixPE": 320, + "PixelBandwidth": 150, + "DwellTime": 1.04e-05, + "ImageOrientationPatientDICOM": [ + 0, + 1, + 0, + 0, + 0, + -1 + ], + "InPlanePhaseEncodingDirectionDICOM": "ROW", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181125 GCC4.9.2", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-brnoCeitec06/anat/sub-brnoCeitec06_space-other_T2star.json b/derivatives/data_preprocessed/sub-brnoCeitec06/anat/sub-brnoCeitec06_space-other_T2star.json index 1a13bd90d4..7d6e7fcdfc 100644 --- a/derivatives/data_preprocessed/sub-brnoCeitec06/anat/sub-brnoCeitec06_space-other_T2star.json +++ b/derivatives/data_preprocessed/sub-brnoCeitec06/anat/sub-brnoCeitec06_space-other_T2star.json @@ -74,5 +74,9 @@ "InPlanePhaseEncodingDirectionDICOM": "COL", "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20181125 GCC4.9.2", - "AcquisitionDuration": 285.0 + "AcquisitionDuration": 285.0, + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-brnoCeitec06/anat/sub-brnoCeitec06_space-other_T2w.json b/derivatives/data_preprocessed/sub-brnoCeitec06/anat/sub-brnoCeitec06_space-other_T2w.json index 30d081bd93..c39b94d7b0 100644 --- a/derivatives/data_preprocessed/sub-brnoCeitec06/anat/sub-brnoCeitec06_space-other_T2w.json +++ b/derivatives/data_preprocessed/sub-brnoCeitec06/anat/sub-brnoCeitec06_space-other_T2w.json @@ -1,67 +1,80 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.219, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma", - "InstitutionName": "CEITEC", - "InstitutionalDepartmentName": "Centrum_neuroved", - "InstitutionAddress": "Kamenice_5_Brno_Moravia_CZ_62500", - "DeviceSerialNumber": "66041", - "StationName": "CEIMR1", - "BodyPartExamined": "CSPINE", - "PatientPosition": "HFS", - "ProcedureStepDescription": "c-spine_CEITEC", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "T2w", - "ProtocolName": "T2w", - "ScanningSequence": "SE", - "SequenceVariant": "SK_SP_OSP", - "ScanOptions": "PFP", - "SequenceName": "_spcR_100", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS3D", "DIS2D"], - "SeriesNumber": 5, - "AcquisitionNumber": 1, - "SliceThickness": 0.8, - "SAR": 0.45917, - "EchoTime": 0.12, - "RepetitionTime": 1.5, - "FlipAngle": 120, - "PartialFourier": 1, - "BaseResolution": 320, - "ShimSetting": [ - 4186, - -8705, - -6389, - 104, - 6, - -135, - -23, - 32 ], - "TxRefAmp": 261.527, - "PhaseResolution": 1, - "PhaseOversampling": 0.8, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC5-7;NC1,2", - "CoilString": "HC5-7;NC1_2", - "PulseSequenceDetails": "%SiemensSeq%_tse_vfl", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 100, - "EchoTrainLength": 76, - "PhaseEncodingSteps": 422, - "AcquisitionMatrixPE": 320, - "ReconMatrixPE": 320, - "PixelBandwidth": 625, - "DwellTime": 2.5e-06, - "ImageOrientationPatientDICOM": [ - 1.62e-13, - 1, - 4.894e-12, - -0.0331552, - 4.897e-12, - -0.99945 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181125 GCC4.9.2" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 123.219, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma", + "InstitutionName": "CEITEC", + "InstitutionalDepartmentName": "Centrum_neuroved", + "InstitutionAddress": "Kamenice_5_Brno_Moravia_CZ_62500", + "DeviceSerialNumber": "66041", + "StationName": "CEIMR1", + "BodyPartExamined": "CSPINE", + "PatientPosition": "HFS", + "ProcedureStepDescription": "c-spine_CEITEC", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "T2w", + "ProtocolName": "T2w", + "ScanningSequence": "SE", + "SequenceVariant": "SK_SP_OSP", + "ScanOptions": "PFP", + "SequenceName": "_spcR_100", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS3D", + "DIS2D" + ], + "SeriesNumber": 5, + "AcquisitionNumber": 1, + "SliceThickness": 0.8, + "SAR": 0.45917, + "EchoTime": 0.12, + "RepetitionTime": 1.5, + "FlipAngle": 120, + "PartialFourier": 1, + "BaseResolution": 320, + "ShimSetting": [ + 4186, + -8705, + -6389, + 104, + 6, + -135, + -23, + 32 + ], + "TxRefAmp": 261.527, + "PhaseResolution": 1, + "PhaseOversampling": 0.8, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC5-7;NC1,2", + "CoilString": "HC5-7;NC1_2", + "PulseSequenceDetails": "%SiemensSeq%_tse_vfl", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "EchoTrainLength": 76, + "PhaseEncodingSteps": 422, + "AcquisitionMatrixPE": 320, + "ReconMatrixPE": 320, + "PixelBandwidth": 625, + "DwellTime": 2.5e-06, + "ImageOrientationPatientDICOM": [ + 1.62e-13, + 1, + 4.894e-12, + -0.0331552, + 4.897e-12, + -0.99945 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181125 GCC4.9.2", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-brnoUhb01/anat/sub-brnoUhb01_flip-1_mt-on_space-other_MTS.json b/derivatives/data_preprocessed/sub-brnoUhb01/anat/sub-brnoUhb01_flip-1_mt-on_space-other_MTS.json index 52c0f08186..c7578a19e9 100644 --- a/derivatives/data_preprocessed/sub-brnoUhb01/anat/sub-brnoUhb01_flip-1_mt-on_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-brnoUhb01/anat/sub-brnoUhb01_flip-1_mt-on_space-other_MTS.json @@ -1,41 +1,49 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "GE", - "ManufacturersModelName": "SIGNA_PET_MR", - "InstitutionName": "FN_Brno", - "DeviceSerialNumber": "000000CS1013MR01", - "StationName": "PETMR", - "PatientPosition": "HFS", - "SoftwareVersions": "26_LX_MR_Software_release:MP24.0_R03_1712.b", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-MT1", - "ProtocolName": "GRE-MT1", - "ScanningSequence": "GR", - "SequenceVariant": "SS_SP", - "ScanOptions": "EDR_GEMS_MT_GEMS_FILTERED_GEMS_PFF", - "ImageType": ["ORIGINAL", "PRIMARY", "OTHER"], - "SeriesNumber": 8, - "AcquisitionTime": "13:28:30.000000", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SpacingBetweenSlices": 5, - "SAR": 2.68598, - "EchoTime": 0.004, - "RepetitionTime": 0.035, - "FlipAngle": 9, - "PercentPhaseFOV": 100, - "AcquisitionMatrixPE": 192, - "ReconMatrixPE": 256, - "PixelBandwidth": 325.547, - "ImageOrientationPatientDICOM": [ - 0.999338, - -0, - -0.0363843, - 0.00747337, - 0.978678, - 0.205265 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "GE", + "ManufacturersModelName": "SIGNA_PET_MR", + "InstitutionName": "FN_Brno", + "DeviceSerialNumber": "000000CS1013MR01", + "StationName": "PETMR", + "PatientPosition": "HFS", + "SoftwareVersions": "26_LX_MR_Software_release:MP24.0_R03_1712.b", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-MT1", + "ProtocolName": "GRE-MT1", + "ScanningSequence": "GR", + "SequenceVariant": "SS_SP", + "ScanOptions": "EDR_GEMS_MT_GEMS_FILTERED_GEMS_PFF", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "OTHER" + ], + "SeriesNumber": 8, + "AcquisitionTime": "13:28:30.000000", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SpacingBetweenSlices": 5, + "SAR": 2.68598, + "EchoTime": 0.004, + "RepetitionTime": 0.035, + "FlipAngle": 9, + "PercentPhaseFOV": 100, + "AcquisitionMatrixPE": 192, + "ReconMatrixPE": 256, + "PixelBandwidth": 325.547, + "ImageOrientationPatientDICOM": [ + 0.999338, + 0, + -0.0363843, + 0.00747337, + 0.978678, + 0.205265 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-brnoUhb01/anat/sub-brnoUhb01_flip-2_mt-off_space-other_MTS.json b/derivatives/data_preprocessed/sub-brnoUhb01/anat/sub-brnoUhb01_flip-2_mt-off_space-other_MTS.json index d30dc7b424..4abe5a785e 100644 --- a/derivatives/data_preprocessed/sub-brnoUhb01/anat/sub-brnoUhb01_flip-2_mt-off_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-brnoUhb01/anat/sub-brnoUhb01_flip-2_mt-off_space-other_MTS.json @@ -1,41 +1,49 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "GE", - "ManufacturersModelName": "SIGNA_PET_MR", - "InstitutionName": "FN_Brno", - "DeviceSerialNumber": "000000CS1013MR01", - "StationName": "PETMR", - "PatientPosition": "HFS", - "SoftwareVersions": "26_LX_MR_Software_release:MP24.0_R03_1712.b", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-T1w", - "ProtocolName": "GRE-T1w", - "ScanningSequence": "GR", - "SequenceVariant": "SS_SP", - "ScanOptions": "EDR_GEMS_FILTERED_GEMS_PFF", - "ImageType": ["ORIGINAL", "PRIMARY", "OTHER"], - "SeriesNumber": 6, - "AcquisitionTime": "13:23:48.000000", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SpacingBetweenSlices": 5, - "SAR": 0.0357649, - "EchoTime": 0.004, - "RepetitionTime": 0.018, - "FlipAngle": 15, - "PercentPhaseFOV": 100, - "AcquisitionMatrixPE": 192, - "ReconMatrixPE": 256, - "PixelBandwidth": 325.547, - "ImageOrientationPatientDICOM": [ - 0.999338, - -0, - -0.0363843, - 0.00747337, - 0.978678, - 0.205265 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "GE", + "ManufacturersModelName": "SIGNA_PET_MR", + "InstitutionName": "FN_Brno", + "DeviceSerialNumber": "000000CS1013MR01", + "StationName": "PETMR", + "PatientPosition": "HFS", + "SoftwareVersions": "26_LX_MR_Software_release:MP24.0_R03_1712.b", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-T1w", + "ProtocolName": "GRE-T1w", + "ScanningSequence": "GR", + "SequenceVariant": "SS_SP", + "ScanOptions": "EDR_GEMS_FILTERED_GEMS_PFF", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "OTHER" + ], + "SeriesNumber": 6, + "AcquisitionTime": "13:23:48.000000", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SpacingBetweenSlices": 5, + "SAR": 0.0357649, + "EchoTime": 0.004, + "RepetitionTime": 0.018, + "FlipAngle": 15, + "PercentPhaseFOV": 100, + "AcquisitionMatrixPE": 192, + "ReconMatrixPE": 256, + "PixelBandwidth": 325.547, + "ImageOrientationPatientDICOM": [ + 0.999338, + 0, + -0.0363843, + 0.00747337, + 0.978678, + 0.205265 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-brnoUhb01/anat/sub-brnoUhb01_space-other_T1w.json b/derivatives/data_preprocessed/sub-brnoUhb01/anat/sub-brnoUhb01_space-other_T1w.json index ad1d38afdf..38a05d7f5a 100644 --- a/derivatives/data_preprocessed/sub-brnoUhb01/anat/sub-brnoUhb01_space-other_T1w.json +++ b/derivatives/data_preprocessed/sub-brnoUhb01/anat/sub-brnoUhb01_space-other_T1w.json @@ -1,42 +1,51 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "GE", - "ManufacturersModelName": "SIGNA_PET_MR", - "InstitutionName": "FN_Brno", - "DeviceSerialNumber": "000000CS1013MR01", - "StationName": "PETMR", - "PatientPosition": "HFS", - "SoftwareVersions": "26_LX_MR_Software_release:MP24.0_R03_1712.b", - "MRAcquisitionType": "3D", - "SeriesDescription": "T1w", - "ProtocolName": "T1w", - "ScanningSequence": "GR", - "SequenceVariant": "SS_SP_SK", - "ScanOptions": "FAST_GEMS_EDR_GEMS_FILTERED_GEMS_ACC_GEMS", - "ImageType": ["ORIGINAL", "PRIMARY", "OTHER"], - "SeriesNumber": 3, - "AcquisitionTime": "13:09:9.000000", - "AcquisitionNumber": 1, - "SliceThickness": 1, - "SpacingBetweenSlices": 1, - "SAR": 0.196832, - "EchoTime": 0.001844, - "RepetitionTime": 0.004756, - "InversionTime": 1, - "FlipAngle": 9, - "PercentPhaseFOV": 80, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 512, - "PixelBandwidth": 558.047, - "ImageOrientationPatientDICOM": [ - -0, - 1, - 0, - -0.0209412, - -0, - -0.999781 ], - "InPlanePhaseEncodingDirectionDICOM": "ROW", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "GE", + "ManufacturersModelName": "SIGNA_PET_MR", + "InstitutionName": "FN_Brno", + "DeviceSerialNumber": "000000CS1013MR01", + "StationName": "PETMR", + "PatientPosition": "HFS", + "SoftwareVersions": "26_LX_MR_Software_release:MP24.0_R03_1712.b", + "MRAcquisitionType": "3D", + "SeriesDescription": "T1w", + "ProtocolName": "T1w", + "ScanningSequence": "GR", + "SequenceVariant": "SS_SP_SK", + "ScanOptions": "FAST_GEMS_EDR_GEMS_FILTERED_GEMS_ACC_GEMS", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "OTHER" + ], + "SeriesNumber": 3, + "AcquisitionTime": "13:09:9.000000", + "AcquisitionNumber": 1, + "SliceThickness": 1, + "SpacingBetweenSlices": 1, + "SAR": 0.196832, + "EchoTime": 0.001844, + "RepetitionTime": 0.004756, + "InversionTime": 1, + "FlipAngle": 9, + "PercentPhaseFOV": 80, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 512, + "PixelBandwidth": 558.047, + "ImageOrientationPatientDICOM": [ + 0, + 1, + 0, + -0.0209412, + 0, + -0.999781 + ], + "InPlanePhaseEncodingDirectionDICOM": "ROW", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-brnoUhb01/anat/sub-brnoUhb01_space-other_T2star.json b/derivatives/data_preprocessed/sub-brnoUhb01/anat/sub-brnoUhb01_space-other_T2star.json index 0b32eed453..84274c6131 100644 --- a/derivatives/data_preprocessed/sub-brnoUhb01/anat/sub-brnoUhb01_space-other_T2star.json +++ b/derivatives/data_preprocessed/sub-brnoUhb01/anat/sub-brnoUhb01_space-other_T2star.json @@ -45,5 +45,9 @@ "InPlanePhaseEncodingDirectionDICOM": "COL", "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0", - "AcquisitionDuration": 288.0 + "AcquisitionDuration": 288.0, + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-brnoUhb01/anat/sub-brnoUhb01_space-other_T2w.json b/derivatives/data_preprocessed/sub-brnoUhb01/anat/sub-brnoUhb01_space-other_T2w.json index 4053f96e91..0122125cf9 100644 --- a/derivatives/data_preprocessed/sub-brnoUhb01/anat/sub-brnoUhb01_space-other_T2w.json +++ b/derivatives/data_preprocessed/sub-brnoUhb01/anat/sub-brnoUhb01_space-other_T2w.json @@ -1,42 +1,51 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "GE", - "ManufacturersModelName": "SIGNA_PET_MR", - "InstitutionName": "FN_Brno", - "DeviceSerialNumber": "000000CS1013MR01", - "StationName": "PETMR", - "PatientPosition": "HFS", - "SoftwareVersions": "26_LX_MR_Software_release:MP24.0_R03_1712.b", - "MRAcquisitionType": "3D", - "SeriesDescription": "T2w", - "ProtocolName": "T2w", - "ScanningSequence": "SE", - "SequenceVariant": "SK_OSP", - "ScanOptions": "FC_FREQ_AX_GEMS_FC_SAT_GEMS_NPW_EDR_GEMS_FILTERED_GEMS_ACC_GEMS", - "ImageType": ["ORIGINAL", "PRIMARY", "OTHER"], - "SeriesNumber": 4, - "AcquisitionTime": "13:14:42.000000", - "AcquisitionNumber": 1, - "SliceThickness": 0.8, - "SpacingBetweenSlices": 0.8, - "SAR": 0.846939, - "EchoTime": 0.128933, - "RepetitionTime": 2.5, - "FlipAngle": 90, - "PercentPhaseFOV": 100, - "EchoTrainLength": 78, - "AcquisitionMatrixPE": 320, - "ReconMatrixPE": 512, - "PixelBandwidth": 325.508, - "ImageOrientationPatientDICOM": [ - -0, - 1, - 0, - -0.01331, - -0, - -0.999911 ], - "InPlanePhaseEncodingDirectionDICOM": "ROW", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "GE", + "ManufacturersModelName": "SIGNA_PET_MR", + "InstitutionName": "FN_Brno", + "DeviceSerialNumber": "000000CS1013MR01", + "StationName": "PETMR", + "PatientPosition": "HFS", + "SoftwareVersions": "26_LX_MR_Software_release:MP24.0_R03_1712.b", + "MRAcquisitionType": "3D", + "SeriesDescription": "T2w", + "ProtocolName": "T2w", + "ScanningSequence": "SE", + "SequenceVariant": "SK_OSP", + "ScanOptions": "FC_FREQ_AX_GEMS_FC_SAT_GEMS_NPW_EDR_GEMS_FILTERED_GEMS_ACC_GEMS", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "OTHER" + ], + "SeriesNumber": 4, + "AcquisitionTime": "13:14:42.000000", + "AcquisitionNumber": 1, + "SliceThickness": 0.8, + "SpacingBetweenSlices": 0.8, + "SAR": 0.846939, + "EchoTime": 0.128933, + "RepetitionTime": 2.5, + "FlipAngle": 90, + "PercentPhaseFOV": 100, + "EchoTrainLength": 78, + "AcquisitionMatrixPE": 320, + "ReconMatrixPE": 512, + "PixelBandwidth": 325.508, + "ImageOrientationPatientDICOM": [ + 0, + 1, + 0, + -0.01331, + 0, + -0.999911 + ], + "InPlanePhaseEncodingDirectionDICOM": "ROW", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-brnoUhb02/anat/sub-brnoUhb02_flip-1_mt-on_space-other_MTS.json b/derivatives/data_preprocessed/sub-brnoUhb02/anat/sub-brnoUhb02_flip-1_mt-on_space-other_MTS.json index 484c125787..ae9f5442b5 100644 --- a/derivatives/data_preprocessed/sub-brnoUhb02/anat/sub-brnoUhb02_flip-1_mt-on_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-brnoUhb02/anat/sub-brnoUhb02_flip-1_mt-on_space-other_MTS.json @@ -1,41 +1,49 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "GE", - "ManufacturersModelName": "SIGNA_PET_MR", - "InstitutionName": "FN_Brno", - "DeviceSerialNumber": "000000CS1013MR01", - "StationName": "PETMR", - "PatientPosition": "HFS", - "SoftwareVersions": "26_LX_MR_Software_release:MP24.0_R03_1712.b", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-MT1", - "ProtocolName": "GRE-MT1", - "ScanningSequence": "GR", - "SequenceVariant": "SS_SP", - "ScanOptions": "EDR_GEMS_MT_GEMS_FILTERED_GEMS_PFF", - "ImageType": ["ORIGINAL", "PRIMARY", "OTHER"], - "SeriesNumber": 7, - "AcquisitionTime": "14:26:32.000000", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SpacingBetweenSlices": 5, - "SAR": 2.8352, - "EchoTime": 0.004, - "RepetitionTime": 0.035, - "FlipAngle": 9, - "PercentPhaseFOV": 100, - "AcquisitionMatrixPE": 192, - "ReconMatrixPE": 256, - "PixelBandwidth": 325.547, - "ImageOrientationPatientDICOM": [ - 0.99917, - -0, - -0.0407383, - 0.00856596, - 0.977644, - 0.210093 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "GE", + "ManufacturersModelName": "SIGNA_PET_MR", + "InstitutionName": "FN_Brno", + "DeviceSerialNumber": "000000CS1013MR01", + "StationName": "PETMR", + "PatientPosition": "HFS", + "SoftwareVersions": "26_LX_MR_Software_release:MP24.0_R03_1712.b", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-MT1", + "ProtocolName": "GRE-MT1", + "ScanningSequence": "GR", + "SequenceVariant": "SS_SP", + "ScanOptions": "EDR_GEMS_MT_GEMS_FILTERED_GEMS_PFF", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "OTHER" + ], + "SeriesNumber": 7, + "AcquisitionTime": "14:26:32.000000", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SpacingBetweenSlices": 5, + "SAR": 2.8352, + "EchoTime": 0.004, + "RepetitionTime": 0.035, + "FlipAngle": 9, + "PercentPhaseFOV": 100, + "AcquisitionMatrixPE": 192, + "ReconMatrixPE": 256, + "PixelBandwidth": 325.547, + "ImageOrientationPatientDICOM": [ + 0.99917, + 0, + -0.0407383, + 0.00856596, + 0.977644, + 0.210093 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-brnoUhb02/anat/sub-brnoUhb02_flip-2_mt-off_space-other_MTS.json b/derivatives/data_preprocessed/sub-brnoUhb02/anat/sub-brnoUhb02_flip-2_mt-off_space-other_MTS.json index 0d059839de..dfcf10bbc2 100644 --- a/derivatives/data_preprocessed/sub-brnoUhb02/anat/sub-brnoUhb02_flip-2_mt-off_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-brnoUhb02/anat/sub-brnoUhb02_flip-2_mt-off_space-other_MTS.json @@ -1,41 +1,49 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "GE", - "ManufacturersModelName": "SIGNA_PET_MR", - "InstitutionName": "FN_Brno", - "DeviceSerialNumber": "000000CS1013MR01", - "StationName": "PETMR", - "PatientPosition": "HFS", - "SoftwareVersions": "26_LX_MR_Software_release:MP24.0_R03_1712.b", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-T1w", - "ProtocolName": "GRE-T1w", - "ScanningSequence": "GR", - "SequenceVariant": "SS_SP", - "ScanOptions": "EDR_GEMS_FILTERED_GEMS_PFF", - "ImageType": ["ORIGINAL", "PRIMARY", "OTHER"], - "SeriesNumber": 6, - "AcquisitionTime": "14:24:31.000000", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SpacingBetweenSlices": 5, - "SAR": 0.0377518, - "EchoTime": 0.004, - "RepetitionTime": 0.018, - "FlipAngle": 15, - "PercentPhaseFOV": 100, - "AcquisitionMatrixPE": 192, - "ReconMatrixPE": 256, - "PixelBandwidth": 325.547, - "ImageOrientationPatientDICOM": [ - 0.99917, - -0, - -0.0407383, - 0.00856596, - 0.977644, - 0.210093 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "GE", + "ManufacturersModelName": "SIGNA_PET_MR", + "InstitutionName": "FN_Brno", + "DeviceSerialNumber": "000000CS1013MR01", + "StationName": "PETMR", + "PatientPosition": "HFS", + "SoftwareVersions": "26_LX_MR_Software_release:MP24.0_R03_1712.b", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-T1w", + "ProtocolName": "GRE-T1w", + "ScanningSequence": "GR", + "SequenceVariant": "SS_SP", + "ScanOptions": "EDR_GEMS_FILTERED_GEMS_PFF", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "OTHER" + ], + "SeriesNumber": 6, + "AcquisitionTime": "14:24:31.000000", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SpacingBetweenSlices": 5, + "SAR": 0.0377518, + "EchoTime": 0.004, + "RepetitionTime": 0.018, + "FlipAngle": 15, + "PercentPhaseFOV": 100, + "AcquisitionMatrixPE": 192, + "ReconMatrixPE": 256, + "PixelBandwidth": 325.547, + "ImageOrientationPatientDICOM": [ + 0.99917, + 0, + -0.0407383, + 0.00856596, + 0.977644, + 0.210093 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-brnoUhb02/anat/sub-brnoUhb02_space-other_T1w.json b/derivatives/data_preprocessed/sub-brnoUhb02/anat/sub-brnoUhb02_space-other_T1w.json index 30f8767749..bbc3bf54d9 100644 --- a/derivatives/data_preprocessed/sub-brnoUhb02/anat/sub-brnoUhb02_space-other_T1w.json +++ b/derivatives/data_preprocessed/sub-brnoUhb02/anat/sub-brnoUhb02_space-other_T1w.json @@ -1,42 +1,51 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "GE", - "ManufacturersModelName": "SIGNA_PET_MR", - "InstitutionName": "FN_Brno", - "DeviceSerialNumber": "000000CS1013MR01", - "StationName": "PETMR", - "PatientPosition": "HFS", - "SoftwareVersions": "26_LX_MR_Software_release:MP24.0_R03_1712.b", - "MRAcquisitionType": "3D", - "SeriesDescription": "T1w", - "ProtocolName": "T1w", - "ScanningSequence": "GR", - "SequenceVariant": "SS_SP_SK", - "ScanOptions": "FAST_GEMS_EDR_GEMS_FILTERED_GEMS_ACC_GEMS", - "ImageType": ["ORIGINAL", "PRIMARY", "OTHER"], - "SeriesNumber": 3, - "AcquisitionTime": "14:10:35.000000", - "AcquisitionNumber": 1, - "SliceThickness": 1, - "SpacingBetweenSlices": 1, - "SAR": 0.20739, - "EchoTime": 0.001852, - "RepetitionTime": 0.004784, - "InversionTime": 1, - "FlipAngle": 9, - "PercentPhaseFOV": 80, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 512, - "PixelBandwidth": 558.047, - "ImageOrientationPatientDICOM": [ - -0, - 1, - 0, - -0.0407383, - -0, - -0.99917 ], - "InPlanePhaseEncodingDirectionDICOM": "ROW", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "GE", + "ManufacturersModelName": "SIGNA_PET_MR", + "InstitutionName": "FN_Brno", + "DeviceSerialNumber": "000000CS1013MR01", + "StationName": "PETMR", + "PatientPosition": "HFS", + "SoftwareVersions": "26_LX_MR_Software_release:MP24.0_R03_1712.b", + "MRAcquisitionType": "3D", + "SeriesDescription": "T1w", + "ProtocolName": "T1w", + "ScanningSequence": "GR", + "SequenceVariant": "SS_SP_SK", + "ScanOptions": "FAST_GEMS_EDR_GEMS_FILTERED_GEMS_ACC_GEMS", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "OTHER" + ], + "SeriesNumber": 3, + "AcquisitionTime": "14:10:35.000000", + "AcquisitionNumber": 1, + "SliceThickness": 1, + "SpacingBetweenSlices": 1, + "SAR": 0.20739, + "EchoTime": 0.001852, + "RepetitionTime": 0.004784, + "InversionTime": 1, + "FlipAngle": 9, + "PercentPhaseFOV": 80, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 512, + "PixelBandwidth": 558.047, + "ImageOrientationPatientDICOM": [ + 0, + 1, + 0, + -0.0407383, + 0, + -0.99917 + ], + "InPlanePhaseEncodingDirectionDICOM": "ROW", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-brnoUhb02/anat/sub-brnoUhb02_space-other_T2star.json b/derivatives/data_preprocessed/sub-brnoUhb02/anat/sub-brnoUhb02_space-other_T2star.json index 042a1aa8ec..e2186a4e6c 100644 --- a/derivatives/data_preprocessed/sub-brnoUhb02/anat/sub-brnoUhb02_space-other_T2star.json +++ b/derivatives/data_preprocessed/sub-brnoUhb02/anat/sub-brnoUhb02_space-other_T2star.json @@ -45,5 +45,9 @@ "InPlanePhaseEncodingDirectionDICOM": "COL", "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0", - "AcquisitionDuration": 288.0 + "AcquisitionDuration": 288.0, + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-brnoUhb02/anat/sub-brnoUhb02_space-other_T2w.json b/derivatives/data_preprocessed/sub-brnoUhb02/anat/sub-brnoUhb02_space-other_T2w.json index 5b36825b32..dbd6bd8787 100644 --- a/derivatives/data_preprocessed/sub-brnoUhb02/anat/sub-brnoUhb02_space-other_T2w.json +++ b/derivatives/data_preprocessed/sub-brnoUhb02/anat/sub-brnoUhb02_space-other_T2w.json @@ -1,42 +1,51 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "GE", - "ManufacturersModelName": "SIGNA_PET_MR", - "InstitutionName": "FN_Brno", - "DeviceSerialNumber": "000000CS1013MR01", - "StationName": "PETMR", - "PatientPosition": "HFS", - "SoftwareVersions": "26_LX_MR_Software_release:MP24.0_R03_1712.b", - "MRAcquisitionType": "3D", - "SeriesDescription": "T2w", - "ProtocolName": "T2w", - "ScanningSequence": "SE", - "SequenceVariant": "SK_OSP", - "ScanOptions": "FC_FREQ_AX_GEMS_FC_SAT_GEMS_NPW_EDR_GEMS_FILTERED_GEMS_ACC_GEMS", - "ImageType": ["ORIGINAL", "PRIMARY", "OTHER"], - "SeriesNumber": 4, - "AcquisitionTime": "14:16:2.000000", - "AcquisitionNumber": 1, - "SliceThickness": 0.8, - "SpacingBetweenSlices": 0.8, - "SAR": 0.845534, - "EchoTime": 0.130105, - "RepetitionTime": 2.5, - "FlipAngle": 90, - "PercentPhaseFOV": 100, - "EchoTrainLength": 78, - "AcquisitionMatrixPE": 320, - "ReconMatrixPE": 512, - "PixelBandwidth": 325.508, - "ImageOrientationPatientDICOM": [ - -0, - 1, - 0, - -0.0274096, - -0, - -0.999624 ], - "InPlanePhaseEncodingDirectionDICOM": "ROW", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "GE", + "ManufacturersModelName": "SIGNA_PET_MR", + "InstitutionName": "FN_Brno", + "DeviceSerialNumber": "000000CS1013MR01", + "StationName": "PETMR", + "PatientPosition": "HFS", + "SoftwareVersions": "26_LX_MR_Software_release:MP24.0_R03_1712.b", + "MRAcquisitionType": "3D", + "SeriesDescription": "T2w", + "ProtocolName": "T2w", + "ScanningSequence": "SE", + "SequenceVariant": "SK_OSP", + "ScanOptions": "FC_FREQ_AX_GEMS_FC_SAT_GEMS_NPW_EDR_GEMS_FILTERED_GEMS_ACC_GEMS", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "OTHER" + ], + "SeriesNumber": 4, + "AcquisitionTime": "14:16:2.000000", + "AcquisitionNumber": 1, + "SliceThickness": 0.8, + "SpacingBetweenSlices": 0.8, + "SAR": 0.845534, + "EchoTime": 0.130105, + "RepetitionTime": 2.5, + "FlipAngle": 90, + "PercentPhaseFOV": 100, + "EchoTrainLength": 78, + "AcquisitionMatrixPE": 320, + "ReconMatrixPE": 512, + "PixelBandwidth": 325.508, + "ImageOrientationPatientDICOM": [ + 0, + 1, + 0, + -0.0274096, + 0, + -0.999624 + ], + "InPlanePhaseEncodingDirectionDICOM": "ROW", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-brnoUhb03/anat/sub-brnoUhb03_flip-1_mt-on_space-other_MTS.json b/derivatives/data_preprocessed/sub-brnoUhb03/anat/sub-brnoUhb03_flip-1_mt-on_space-other_MTS.json index 7ec0d89922..fec2c9ec50 100644 --- a/derivatives/data_preprocessed/sub-brnoUhb03/anat/sub-brnoUhb03_flip-1_mt-on_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-brnoUhb03/anat/sub-brnoUhb03_flip-1_mt-on_space-other_MTS.json @@ -1,41 +1,49 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "GE", - "ManufacturersModelName": "SIGNA_PET_MR", - "InstitutionName": "FN_Brno", - "DeviceSerialNumber": "000000CS1013MR01", - "StationName": "PETMR", - "PatientPosition": "HFS", - "SoftwareVersions": "26_LX_MR_Software_release:MP24.0_R03_1712.b", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-MT1", - "ProtocolName": "GRE-MT1", - "ScanningSequence": "GR", - "SequenceVariant": "SS_SP", - "ScanOptions": "EDR_GEMS_MT_GEMS_FILTERED_GEMS_PFF", - "ImageType": ["ORIGINAL", "PRIMARY", "OTHER"], - "SeriesNumber": 7, - "AcquisitionTime": "15:26:9.000000", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SpacingBetweenSlices": 5, - "SAR": 1.67128, - "EchoTime": 0.004, - "RepetitionTime": 0.035, - "FlipAngle": 9, - "PercentPhaseFOV": 100, - "AcquisitionMatrixPE": 192, - "ReconMatrixPE": 256, - "PixelBandwidth": 325.547, - "ImageOrientationPatientDICOM": [ - 0.995567, - -0, - 0.0940519, - -0.00787812, - 0.996486, - 0.083392 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "GE", + "ManufacturersModelName": "SIGNA_PET_MR", + "InstitutionName": "FN_Brno", + "DeviceSerialNumber": "000000CS1013MR01", + "StationName": "PETMR", + "PatientPosition": "HFS", + "SoftwareVersions": "26_LX_MR_Software_release:MP24.0_R03_1712.b", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-MT1", + "ProtocolName": "GRE-MT1", + "ScanningSequence": "GR", + "SequenceVariant": "SS_SP", + "ScanOptions": "EDR_GEMS_MT_GEMS_FILTERED_GEMS_PFF", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "OTHER" + ], + "SeriesNumber": 7, + "AcquisitionTime": "15:26:9.000000", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SpacingBetweenSlices": 5, + "SAR": 1.67128, + "EchoTime": 0.004, + "RepetitionTime": 0.035, + "FlipAngle": 9, + "PercentPhaseFOV": 100, + "AcquisitionMatrixPE": 192, + "ReconMatrixPE": 256, + "PixelBandwidth": 325.547, + "ImageOrientationPatientDICOM": [ + 0.995567, + 0, + 0.0940519, + -0.00787812, + 0.996486, + 0.083392 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-brnoUhb03/anat/sub-brnoUhb03_flip-2_mt-off_space-other_MTS.json b/derivatives/data_preprocessed/sub-brnoUhb03/anat/sub-brnoUhb03_flip-2_mt-off_space-other_MTS.json index 2afe799bdd..ef376b69bb 100644 --- a/derivatives/data_preprocessed/sub-brnoUhb03/anat/sub-brnoUhb03_flip-2_mt-off_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-brnoUhb03/anat/sub-brnoUhb03_flip-2_mt-off_space-other_MTS.json @@ -1,41 +1,49 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "GE", - "ManufacturersModelName": "SIGNA_PET_MR", - "InstitutionName": "FN_Brno", - "DeviceSerialNumber": "000000CS1013MR01", - "StationName": "PETMR", - "PatientPosition": "HFS", - "SoftwareVersions": "26_LX_MR_Software_release:MP24.0_R03_1712.b", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-T1w", - "ProtocolName": "GRE-T1w", - "ScanningSequence": "GR", - "SequenceVariant": "SS_SP", - "ScanOptions": "EDR_GEMS_FILTERED_GEMS_PFF", - "ImageType": ["ORIGINAL", "PRIMARY", "OTHER"], - "SeriesNumber": 6, - "AcquisitionTime": "15:24:7.000000", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SpacingBetweenSlices": 5, - "SAR": 0.0222537, - "EchoTime": 0.004, - "RepetitionTime": 0.018, - "FlipAngle": 15, - "PercentPhaseFOV": 100, - "AcquisitionMatrixPE": 192, - "ReconMatrixPE": 256, - "PixelBandwidth": 325.547, - "ImageOrientationPatientDICOM": [ - 0.995567, - -0, - 0.0940519, - -0.00787812, - 0.996486, - 0.083392 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "GE", + "ManufacturersModelName": "SIGNA_PET_MR", + "InstitutionName": "FN_Brno", + "DeviceSerialNumber": "000000CS1013MR01", + "StationName": "PETMR", + "PatientPosition": "HFS", + "SoftwareVersions": "26_LX_MR_Software_release:MP24.0_R03_1712.b", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-T1w", + "ProtocolName": "GRE-T1w", + "ScanningSequence": "GR", + "SequenceVariant": "SS_SP", + "ScanOptions": "EDR_GEMS_FILTERED_GEMS_PFF", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "OTHER" + ], + "SeriesNumber": 6, + "AcquisitionTime": "15:24:7.000000", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SpacingBetweenSlices": 5, + "SAR": 0.0222537, + "EchoTime": 0.004, + "RepetitionTime": 0.018, + "FlipAngle": 15, + "PercentPhaseFOV": 100, + "AcquisitionMatrixPE": 192, + "ReconMatrixPE": 256, + "PixelBandwidth": 325.547, + "ImageOrientationPatientDICOM": [ + 0.995567, + 0, + 0.0940519, + -0.00787812, + 0.996486, + 0.083392 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-brnoUhb03/anat/sub-brnoUhb03_space-other_T1w.json b/derivatives/data_preprocessed/sub-brnoUhb03/anat/sub-brnoUhb03_space-other_T1w.json index 71d64977a1..16a2d1fb0a 100644 --- a/derivatives/data_preprocessed/sub-brnoUhb03/anat/sub-brnoUhb03_space-other_T1w.json +++ b/derivatives/data_preprocessed/sub-brnoUhb03/anat/sub-brnoUhb03_space-other_T1w.json @@ -1,42 +1,51 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "GE", - "ManufacturersModelName": "SIGNA_PET_MR", - "InstitutionName": "FN_Brno", - "DeviceSerialNumber": "000000CS1013MR01", - "StationName": "PETMR", - "PatientPosition": "HFS", - "SoftwareVersions": "26_LX_MR_Software_release:MP24.0_R03_1712.b", - "MRAcquisitionType": "3D", - "SeriesDescription": "T1w", - "ProtocolName": "T1w", - "ScanningSequence": "GR", - "SequenceVariant": "SS_SP_SK", - "ScanOptions": "FAST_GEMS_EDR_GEMS_FILTERED_GEMS_ACC_GEMS", - "ImageType": ["ORIGINAL", "PRIMARY", "OTHER"], - "SeriesNumber": 3, - "AcquisitionTime": "15:09:44.000000", - "AcquisitionNumber": 1, - "SliceThickness": 1, - "SpacingBetweenSlices": 1, - "SAR": 0.12212, - "EchoTime": 0.001852, - "RepetitionTime": 0.0048, - "InversionTime": 1, - "FlipAngle": 9, - "PercentPhaseFOV": 80, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 512, - "PixelBandwidth": 558.047, - "ImageOrientationPatientDICOM": [ - -0, - 1, - 0, - 0.0609103, - -0, - -0.998143 ], - "InPlanePhaseEncodingDirectionDICOM": "ROW", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "GE", + "ManufacturersModelName": "SIGNA_PET_MR", + "InstitutionName": "FN_Brno", + "DeviceSerialNumber": "000000CS1013MR01", + "StationName": "PETMR", + "PatientPosition": "HFS", + "SoftwareVersions": "26_LX_MR_Software_release:MP24.0_R03_1712.b", + "MRAcquisitionType": "3D", + "SeriesDescription": "T1w", + "ProtocolName": "T1w", + "ScanningSequence": "GR", + "SequenceVariant": "SS_SP_SK", + "ScanOptions": "FAST_GEMS_EDR_GEMS_FILTERED_GEMS_ACC_GEMS", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "OTHER" + ], + "SeriesNumber": 3, + "AcquisitionTime": "15:09:44.000000", + "AcquisitionNumber": 1, + "SliceThickness": 1, + "SpacingBetweenSlices": 1, + "SAR": 0.12212, + "EchoTime": 0.001852, + "RepetitionTime": 0.0048, + "InversionTime": 1, + "FlipAngle": 9, + "PercentPhaseFOV": 80, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 512, + "PixelBandwidth": 558.047, + "ImageOrientationPatientDICOM": [ + 0, + 1, + 0, + 0.0609103, + 0, + -0.998143 + ], + "InPlanePhaseEncodingDirectionDICOM": "ROW", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-brnoUhb03/anat/sub-brnoUhb03_space-other_T2star.json b/derivatives/data_preprocessed/sub-brnoUhb03/anat/sub-brnoUhb03_space-other_T2star.json index 1561098f92..1d7848ebd7 100644 --- a/derivatives/data_preprocessed/sub-brnoUhb03/anat/sub-brnoUhb03_space-other_T2star.json +++ b/derivatives/data_preprocessed/sub-brnoUhb03/anat/sub-brnoUhb03_space-other_T2star.json @@ -45,5 +45,9 @@ "InPlanePhaseEncodingDirectionDICOM": "COL", "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0", - "AcquisitionDuration": 288.0 + "AcquisitionDuration": 288.0, + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-brnoUhb03/anat/sub-brnoUhb03_space-other_T2w.json b/derivatives/data_preprocessed/sub-brnoUhb03/anat/sub-brnoUhb03_space-other_T2w.json index da76ed9925..18fedcd6a5 100644 --- a/derivatives/data_preprocessed/sub-brnoUhb03/anat/sub-brnoUhb03_space-other_T2w.json +++ b/derivatives/data_preprocessed/sub-brnoUhb03/anat/sub-brnoUhb03_space-other_T2w.json @@ -1,42 +1,51 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "GE", - "ManufacturersModelName": "SIGNA_PET_MR", - "InstitutionName": "FN_Brno", - "DeviceSerialNumber": "000000CS1013MR01", - "StationName": "PETMR", - "PatientPosition": "HFS", - "SoftwareVersions": "26_LX_MR_Software_release:MP24.0_R03_1712.b", - "MRAcquisitionType": "3D", - "SeriesDescription": "T2w", - "ProtocolName": "T2w", - "ScanningSequence": "SE", - "SequenceVariant": "SK_OSP", - "ScanOptions": "FC_FREQ_AX_GEMS_FC_SAT_GEMS_NPW_EDR_GEMS_FILTERED_GEMS_ACC_GEMS", - "ImageType": ["ORIGINAL", "PRIMARY", "OTHER"], - "SeriesNumber": 4, - "AcquisitionTime": "15:15:6.000000", - "AcquisitionNumber": 1, - "SliceThickness": 0.8, - "SpacingBetweenSlices": 0.8, - "SAR": 0.856112, - "EchoTime": 0.131497, - "RepetitionTime": 2.5, - "FlipAngle": 90, - "PercentPhaseFOV": 100, - "EchoTrainLength": 78, - "AcquisitionMatrixPE": 320, - "ReconMatrixPE": 512, - "PixelBandwidth": 325.508, - "ImageOrientationPatientDICOM": [ - -0, - 1, - 0, - 0.0642973, - -0, - -0.997931 ], - "InPlanePhaseEncodingDirectionDICOM": "ROW", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "GE", + "ManufacturersModelName": "SIGNA_PET_MR", + "InstitutionName": "FN_Brno", + "DeviceSerialNumber": "000000CS1013MR01", + "StationName": "PETMR", + "PatientPosition": "HFS", + "SoftwareVersions": "26_LX_MR_Software_release:MP24.0_R03_1712.b", + "MRAcquisitionType": "3D", + "SeriesDescription": "T2w", + "ProtocolName": "T2w", + "ScanningSequence": "SE", + "SequenceVariant": "SK_OSP", + "ScanOptions": "FC_FREQ_AX_GEMS_FC_SAT_GEMS_NPW_EDR_GEMS_FILTERED_GEMS_ACC_GEMS", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "OTHER" + ], + "SeriesNumber": 4, + "AcquisitionTime": "15:15:6.000000", + "AcquisitionNumber": 1, + "SliceThickness": 0.8, + "SpacingBetweenSlices": 0.8, + "SAR": 0.856112, + "EchoTime": 0.131497, + "RepetitionTime": 2.5, + "FlipAngle": 90, + "PercentPhaseFOV": 100, + "EchoTrainLength": 78, + "AcquisitionMatrixPE": 320, + "ReconMatrixPE": 512, + "PixelBandwidth": 325.508, + "ImageOrientationPatientDICOM": [ + 0, + 1, + 0, + 0.0642973, + 0, + -0.997931 + ], + "InPlanePhaseEncodingDirectionDICOM": "ROW", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-brnoUhb04/anat/sub-brnoUhb04_flip-1_mt-on_space-other_MTS.json b/derivatives/data_preprocessed/sub-brnoUhb04/anat/sub-brnoUhb04_flip-1_mt-on_space-other_MTS.json index 4c4accfaf6..d229bfef4d 100644 --- a/derivatives/data_preprocessed/sub-brnoUhb04/anat/sub-brnoUhb04_flip-1_mt-on_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-brnoUhb04/anat/sub-brnoUhb04_flip-1_mt-on_space-other_MTS.json @@ -1,41 +1,49 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "GE", - "ManufacturersModelName": "SIGNA_PET_MR", - "InstitutionName": "FN_Brno", - "DeviceSerialNumber": "000000CS1013MR01", - "StationName": "PETMR", - "PatientPosition": "HFS", - "SoftwareVersions": "26_LX_MR_Software_release:MP24.0_R03_1712.b", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-MT1", - "ProtocolName": "GRE-MT1", - "ScanningSequence": "GR", - "SequenceVariant": "SS_SP", - "ScanOptions": "EDR_GEMS_MT_GEMS_FILTERED_GEMS_PFF", - "ImageType": ["ORIGINAL", "PRIMARY", "OTHER"], - "SeriesNumber": 7, - "AcquisitionTime": "16:22:35.000000", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SpacingBetweenSlices": 5, - "SAR": 2.5666, - "EchoTime": 0.004, - "RepetitionTime": 0.035, - "FlipAngle": 9, - "PercentPhaseFOV": 100, - "AcquisitionMatrixPE": 192, - "ReconMatrixPE": 256, - "PixelBandwidth": 325.547, - "ImageOrientationPatientDICOM": [ - 0.999862, - -0, - -0.0166241, - 0.00126044, - 0.997122, - 0.0758069 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "GE", + "ManufacturersModelName": "SIGNA_PET_MR", + "InstitutionName": "FN_Brno", + "DeviceSerialNumber": "000000CS1013MR01", + "StationName": "PETMR", + "PatientPosition": "HFS", + "SoftwareVersions": "26_LX_MR_Software_release:MP24.0_R03_1712.b", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-MT1", + "ProtocolName": "GRE-MT1", + "ScanningSequence": "GR", + "SequenceVariant": "SS_SP", + "ScanOptions": "EDR_GEMS_MT_GEMS_FILTERED_GEMS_PFF", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "OTHER" + ], + "SeriesNumber": 7, + "AcquisitionTime": "16:22:35.000000", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SpacingBetweenSlices": 5, + "SAR": 2.5666, + "EchoTime": 0.004, + "RepetitionTime": 0.035, + "FlipAngle": 9, + "PercentPhaseFOV": 100, + "AcquisitionMatrixPE": 192, + "ReconMatrixPE": 256, + "PixelBandwidth": 325.547, + "ImageOrientationPatientDICOM": [ + 0.999862, + 0, + -0.0166241, + 0.00126044, + 0.997122, + 0.0758069 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-brnoUhb04/anat/sub-brnoUhb04_flip-2_mt-off_space-other_MTS.json b/derivatives/data_preprocessed/sub-brnoUhb04/anat/sub-brnoUhb04_flip-2_mt-off_space-other_MTS.json index 84bc7acf64..ba7cd1c8ce 100644 --- a/derivatives/data_preprocessed/sub-brnoUhb04/anat/sub-brnoUhb04_flip-2_mt-off_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-brnoUhb04/anat/sub-brnoUhb04_flip-2_mt-off_space-other_MTS.json @@ -1,41 +1,49 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "GE", - "ManufacturersModelName": "SIGNA_PET_MR", - "InstitutionName": "FN_Brno", - "DeviceSerialNumber": "000000CS1013MR01", - "StationName": "PETMR", - "PatientPosition": "HFS", - "SoftwareVersions": "26_LX_MR_Software_release:MP24.0_R03_1712.b", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-T1w", - "ProtocolName": "GRE-T1w", - "ScanningSequence": "GR", - "SequenceVariant": "SS_SP", - "ScanOptions": "EDR_GEMS_FILTERED_GEMS_PFF", - "ImageType": ["ORIGINAL", "PRIMARY", "OTHER"], - "SeriesNumber": 6, - "AcquisitionTime": "16:20:33.000000", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SpacingBetweenSlices": 5, - "SAR": 0.0341753, - "EchoTime": 0.004, - "RepetitionTime": 0.018, - "FlipAngle": 15, - "PercentPhaseFOV": 100, - "AcquisitionMatrixPE": 192, - "ReconMatrixPE": 256, - "PixelBandwidth": 325.547, - "ImageOrientationPatientDICOM": [ - 0.999862, - -0, - -0.0166241, - 0.00126044, - 0.997122, - 0.0758069 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "GE", + "ManufacturersModelName": "SIGNA_PET_MR", + "InstitutionName": "FN_Brno", + "DeviceSerialNumber": "000000CS1013MR01", + "StationName": "PETMR", + "PatientPosition": "HFS", + "SoftwareVersions": "26_LX_MR_Software_release:MP24.0_R03_1712.b", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-T1w", + "ProtocolName": "GRE-T1w", + "ScanningSequence": "GR", + "SequenceVariant": "SS_SP", + "ScanOptions": "EDR_GEMS_FILTERED_GEMS_PFF", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "OTHER" + ], + "SeriesNumber": 6, + "AcquisitionTime": "16:20:33.000000", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SpacingBetweenSlices": 5, + "SAR": 0.0341753, + "EchoTime": 0.004, + "RepetitionTime": 0.018, + "FlipAngle": 15, + "PercentPhaseFOV": 100, + "AcquisitionMatrixPE": 192, + "ReconMatrixPE": 256, + "PixelBandwidth": 325.547, + "ImageOrientationPatientDICOM": [ + 0.999862, + 0, + -0.0166241, + 0.00126044, + 0.997122, + 0.0758069 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-brnoUhb04/anat/sub-brnoUhb04_space-other_T1w.json b/derivatives/data_preprocessed/sub-brnoUhb04/anat/sub-brnoUhb04_space-other_T1w.json index b96e0891b0..db1e31688f 100644 --- a/derivatives/data_preprocessed/sub-brnoUhb04/anat/sub-brnoUhb04_space-other_T1w.json +++ b/derivatives/data_preprocessed/sub-brnoUhb04/anat/sub-brnoUhb04_space-other_T1w.json @@ -1,42 +1,51 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "GE", - "ManufacturersModelName": "SIGNA_PET_MR", - "InstitutionName": "FN_Brno", - "DeviceSerialNumber": "000000CS1013MR01", - "StationName": "PETMR", - "PatientPosition": "HFS", - "SoftwareVersions": "26_LX_MR_Software_release:MP24.0_R03_1712.b", - "MRAcquisitionType": "3D", - "SeriesDescription": "T1w", - "ProtocolName": "T1w", - "ScanningSequence": "GR", - "SequenceVariant": "SS_SP_SK", - "ScanOptions": "FAST_GEMS_EDR_GEMS_FILTERED_GEMS_ACC_GEMS", - "ImageType": ["ORIGINAL", "PRIMARY", "OTHER"], - "SeriesNumber": 3, - "AcquisitionTime": "16:05:52.000000", - "AcquisitionNumber": 1, - "SliceThickness": 1, - "SpacingBetweenSlices": 1, - "SAR": 0.188084, - "EchoTime": 0.001852, - "RepetitionTime": 0.004756, - "InversionTime": 1, - "FlipAngle": 9, - "PercentPhaseFOV": 80, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 512, - "PixelBandwidth": 558.047, - "ImageOrientationPatientDICOM": [ - -0, - 1, - 0, - -0.0105403, - -0, - -0.999944 ], - "InPlanePhaseEncodingDirectionDICOM": "ROW", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "GE", + "ManufacturersModelName": "SIGNA_PET_MR", + "InstitutionName": "FN_Brno", + "DeviceSerialNumber": "000000CS1013MR01", + "StationName": "PETMR", + "PatientPosition": "HFS", + "SoftwareVersions": "26_LX_MR_Software_release:MP24.0_R03_1712.b", + "MRAcquisitionType": "3D", + "SeriesDescription": "T1w", + "ProtocolName": "T1w", + "ScanningSequence": "GR", + "SequenceVariant": "SS_SP_SK", + "ScanOptions": "FAST_GEMS_EDR_GEMS_FILTERED_GEMS_ACC_GEMS", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "OTHER" + ], + "SeriesNumber": 3, + "AcquisitionTime": "16:05:52.000000", + "AcquisitionNumber": 1, + "SliceThickness": 1, + "SpacingBetweenSlices": 1, + "SAR": 0.188084, + "EchoTime": 0.001852, + "RepetitionTime": 0.004756, + "InversionTime": 1, + "FlipAngle": 9, + "PercentPhaseFOV": 80, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 512, + "PixelBandwidth": 558.047, + "ImageOrientationPatientDICOM": [ + 0, + 1, + 0, + -0.0105403, + 0, + -0.999944 + ], + "InPlanePhaseEncodingDirectionDICOM": "ROW", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-brnoUhb04/anat/sub-brnoUhb04_space-other_T2star.json b/derivatives/data_preprocessed/sub-brnoUhb04/anat/sub-brnoUhb04_space-other_T2star.json index dbe307d46f..a31a3306d3 100644 --- a/derivatives/data_preprocessed/sub-brnoUhb04/anat/sub-brnoUhb04_space-other_T2star.json +++ b/derivatives/data_preprocessed/sub-brnoUhb04/anat/sub-brnoUhb04_space-other_T2star.json @@ -45,5 +45,9 @@ "InPlanePhaseEncodingDirectionDICOM": "COL", "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0", - "AcquisitionDuration": 288.0 + "AcquisitionDuration": 288.0, + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-brnoUhb04/anat/sub-brnoUhb04_space-other_T2w.json b/derivatives/data_preprocessed/sub-brnoUhb04/anat/sub-brnoUhb04_space-other_T2w.json index f7927390a0..7517b24d1b 100644 --- a/derivatives/data_preprocessed/sub-brnoUhb04/anat/sub-brnoUhb04_space-other_T2w.json +++ b/derivatives/data_preprocessed/sub-brnoUhb04/anat/sub-brnoUhb04_space-other_T2w.json @@ -1,42 +1,51 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "GE", - "ManufacturersModelName": "SIGNA_PET_MR", - "InstitutionName": "FN_Brno", - "DeviceSerialNumber": "000000CS1013MR01", - "StationName": "PETMR", - "PatientPosition": "HFS", - "SoftwareVersions": "26_LX_MR_Software_release:MP24.0_R03_1712.b", - "MRAcquisitionType": "3D", - "SeriesDescription": "T2w", - "ProtocolName": "T2w", - "ScanningSequence": "SE", - "SequenceVariant": "SK_OSP", - "ScanOptions": "FC_FREQ_AX_GEMS_FC_SAT_GEMS_NPW_EDR_GEMS_FILTERED_GEMS_ACC_GEMS", - "ImageType": ["ORIGINAL", "PRIMARY", "OTHER"], - "SeriesNumber": 4, - "AcquisitionTime": "16:11:18.000000", - "AcquisitionNumber": 1, - "SliceThickness": 0.8, - "SpacingBetweenSlices": 0.8, - "SAR": 0.848314, - "EchoTime": 0.128933, - "RepetitionTime": 2.5, - "FlipAngle": 90, - "PercentPhaseFOV": 100, - "EchoTrainLength": 78, - "AcquisitionMatrixPE": 320, - "ReconMatrixPE": 512, - "PixelBandwidth": 325.508, - "ImageOrientationPatientDICOM": [ - -0, - 1, - 0, - -0.01331, - -0, - -0.999911 ], - "InPlanePhaseEncodingDirectionDICOM": "ROW", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "GE", + "ManufacturersModelName": "SIGNA_PET_MR", + "InstitutionName": "FN_Brno", + "DeviceSerialNumber": "000000CS1013MR01", + "StationName": "PETMR", + "PatientPosition": "HFS", + "SoftwareVersions": "26_LX_MR_Software_release:MP24.0_R03_1712.b", + "MRAcquisitionType": "3D", + "SeriesDescription": "T2w", + "ProtocolName": "T2w", + "ScanningSequence": "SE", + "SequenceVariant": "SK_OSP", + "ScanOptions": "FC_FREQ_AX_GEMS_FC_SAT_GEMS_NPW_EDR_GEMS_FILTERED_GEMS_ACC_GEMS", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "OTHER" + ], + "SeriesNumber": 4, + "AcquisitionTime": "16:11:18.000000", + "AcquisitionNumber": 1, + "SliceThickness": 0.8, + "SpacingBetweenSlices": 0.8, + "SAR": 0.848314, + "EchoTime": 0.128933, + "RepetitionTime": 2.5, + "FlipAngle": 90, + "PercentPhaseFOV": 100, + "EchoTrainLength": 78, + "AcquisitionMatrixPE": 320, + "ReconMatrixPE": 512, + "PixelBandwidth": 325.508, + "ImageOrientationPatientDICOM": [ + 0, + 1, + 0, + -0.01331, + 0, + -0.999911 + ], + "InPlanePhaseEncodingDirectionDICOM": "ROW", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-brnoUhb05/anat/sub-brnoUhb05_flip-1_mt-on_space-other_MTS.json b/derivatives/data_preprocessed/sub-brnoUhb05/anat/sub-brnoUhb05_flip-1_mt-on_space-other_MTS.json index 3621535907..24702f3933 100644 --- a/derivatives/data_preprocessed/sub-brnoUhb05/anat/sub-brnoUhb05_flip-1_mt-on_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-brnoUhb05/anat/sub-brnoUhb05_flip-1_mt-on_space-other_MTS.json @@ -1,41 +1,49 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "GE", - "ManufacturersModelName": "SIGNA_PET_MR", - "InstitutionName": "FN_Brno", - "DeviceSerialNumber": "000000CS1013MR01", - "StationName": "PETMR", - "PatientPosition": "HFS", - "SoftwareVersions": "26_LX_MR_Software_release:MP24.0_R03_1712.b", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-MT1", - "ProtocolName": "GRE-MT1", - "ScanningSequence": "GR", - "SequenceVariant": "SS_SP", - "ScanOptions": "EDR_GEMS_MT_GEMS_FILTERED_GEMS_PFF", - "ImageType": ["ORIGINAL", "PRIMARY", "OTHER"], - "SeriesNumber": 7, - "AcquisitionTime": "13:19:20.000000", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SpacingBetweenSlices": 5, - "SAR": 2.20847, - "EchoTime": 0.004, - "RepetitionTime": 0.035, - "FlipAngle": 9, - "PercentPhaseFOV": 100, - "AcquisitionMatrixPE": 192, - "ReconMatrixPE": 256, - "PixelBandwidth": 325.547, - "ImageOrientationPatientDICOM": [ - 0.999341, - -0, - 0.0362981, - -0.00304064, - 0.996485, - 0.0837124 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "GE", + "ManufacturersModelName": "SIGNA_PET_MR", + "InstitutionName": "FN_Brno", + "DeviceSerialNumber": "000000CS1013MR01", + "StationName": "PETMR", + "PatientPosition": "HFS", + "SoftwareVersions": "26_LX_MR_Software_release:MP24.0_R03_1712.b", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-MT1", + "ProtocolName": "GRE-MT1", + "ScanningSequence": "GR", + "SequenceVariant": "SS_SP", + "ScanOptions": "EDR_GEMS_MT_GEMS_FILTERED_GEMS_PFF", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "OTHER" + ], + "SeriesNumber": 7, + "AcquisitionTime": "13:19:20.000000", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SpacingBetweenSlices": 5, + "SAR": 2.20847, + "EchoTime": 0.004, + "RepetitionTime": 0.035, + "FlipAngle": 9, + "PercentPhaseFOV": 100, + "AcquisitionMatrixPE": 192, + "ReconMatrixPE": 256, + "PixelBandwidth": 325.547, + "ImageOrientationPatientDICOM": [ + 0.999341, + 0, + 0.0362981, + -0.00304064, + 0.996485, + 0.0837124 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-brnoUhb05/anat/sub-brnoUhb05_flip-2_mt-off_space-other_MTS.json b/derivatives/data_preprocessed/sub-brnoUhb05/anat/sub-brnoUhb05_flip-2_mt-off_space-other_MTS.json index e1954228ce..15cb46022c 100644 --- a/derivatives/data_preprocessed/sub-brnoUhb05/anat/sub-brnoUhb05_flip-2_mt-off_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-brnoUhb05/anat/sub-brnoUhb05_flip-2_mt-off_space-other_MTS.json @@ -1,41 +1,49 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "GE", - "ManufacturersModelName": "SIGNA_PET_MR", - "InstitutionName": "FN_Brno", - "DeviceSerialNumber": "000000CS1013MR01", - "StationName": "PETMR", - "PatientPosition": "HFS", - "SoftwareVersions": "26_LX_MR_Software_release:MP24.0_R03_1712.b", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-T1w", - "ProtocolName": "GRE-T1w", - "ScanningSequence": "GR", - "SequenceVariant": "SS_SP", - "ScanOptions": "EDR_GEMS_FILTERED_GEMS_PFF", - "ImageType": ["ORIGINAL", "PRIMARY", "OTHER"], - "SeriesNumber": 6, - "AcquisitionTime": "13:17:18.000000", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SpacingBetweenSlices": 5, - "SAR": 0.0294067, - "EchoTime": 0.004, - "RepetitionTime": 0.018, - "FlipAngle": 15, - "PercentPhaseFOV": 100, - "AcquisitionMatrixPE": 192, - "ReconMatrixPE": 256, - "PixelBandwidth": 325.547, - "ImageOrientationPatientDICOM": [ - 0.999341, - -0, - 0.0362981, - -0.00304064, - 0.996485, - 0.0837124 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "GE", + "ManufacturersModelName": "SIGNA_PET_MR", + "InstitutionName": "FN_Brno", + "DeviceSerialNumber": "000000CS1013MR01", + "StationName": "PETMR", + "PatientPosition": "HFS", + "SoftwareVersions": "26_LX_MR_Software_release:MP24.0_R03_1712.b", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-T1w", + "ProtocolName": "GRE-T1w", + "ScanningSequence": "GR", + "SequenceVariant": "SS_SP", + "ScanOptions": "EDR_GEMS_FILTERED_GEMS_PFF", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "OTHER" + ], + "SeriesNumber": 6, + "AcquisitionTime": "13:17:18.000000", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SpacingBetweenSlices": 5, + "SAR": 0.0294067, + "EchoTime": 0.004, + "RepetitionTime": 0.018, + "FlipAngle": 15, + "PercentPhaseFOV": 100, + "AcquisitionMatrixPE": 192, + "ReconMatrixPE": 256, + "PixelBandwidth": 325.547, + "ImageOrientationPatientDICOM": [ + 0.999341, + 0, + 0.0362981, + -0.00304064, + 0.996485, + 0.0837124 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-brnoUhb05/anat/sub-brnoUhb05_space-other_T1w.json b/derivatives/data_preprocessed/sub-brnoUhb05/anat/sub-brnoUhb05_space-other_T1w.json index a6d763d8fa..7cd871e8fb 100644 --- a/derivatives/data_preprocessed/sub-brnoUhb05/anat/sub-brnoUhb05_space-other_T1w.json +++ b/derivatives/data_preprocessed/sub-brnoUhb05/anat/sub-brnoUhb05_space-other_T1w.json @@ -1,42 +1,51 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "GE", - "ManufacturersModelName": "SIGNA_PET_MR", - "InstitutionName": "FN_Brno", - "DeviceSerialNumber": "000000CS1013MR01", - "StationName": "PETMR", - "PatientPosition": "HFS", - "SoftwareVersions": "26_LX_MR_Software_release:MP24.0_R03_1712.b", - "MRAcquisitionType": "3D", - "SeriesDescription": "T1w", - "ProtocolName": "T1w", - "ScanningSequence": "GR", - "SequenceVariant": "SS_SP_SK", - "ScanOptions": "FAST_GEMS_EDR_GEMS_FILTERED_GEMS_ACC_GEMS", - "ImageType": ["ORIGINAL", "PRIMARY", "OTHER"], - "SeriesNumber": 3, - "AcquisitionTime": "13:02:19.000000", - "AcquisitionNumber": 1, - "SliceThickness": 1, - "SpacingBetweenSlices": 1, - "SAR": 0.161839, - "EchoTime": 0.00184, - "RepetitionTime": 0.004756, - "InversionTime": 1, - "FlipAngle": 9, - "PercentPhaseFOV": 80, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 512, - "PixelBandwidth": 558.047, - "ImageOrientationPatientDICOM": [ - -0, - 1, - 0, - 0.0276687, - -0, - -0.999617 ], - "InPlanePhaseEncodingDirectionDICOM": "ROW", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "GE", + "ManufacturersModelName": "SIGNA_PET_MR", + "InstitutionName": "FN_Brno", + "DeviceSerialNumber": "000000CS1013MR01", + "StationName": "PETMR", + "PatientPosition": "HFS", + "SoftwareVersions": "26_LX_MR_Software_release:MP24.0_R03_1712.b", + "MRAcquisitionType": "3D", + "SeriesDescription": "T1w", + "ProtocolName": "T1w", + "ScanningSequence": "GR", + "SequenceVariant": "SS_SP_SK", + "ScanOptions": "FAST_GEMS_EDR_GEMS_FILTERED_GEMS_ACC_GEMS", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "OTHER" + ], + "SeriesNumber": 3, + "AcquisitionTime": "13:02:19.000000", + "AcquisitionNumber": 1, + "SliceThickness": 1, + "SpacingBetweenSlices": 1, + "SAR": 0.161839, + "EchoTime": 0.00184, + "RepetitionTime": 0.004756, + "InversionTime": 1, + "FlipAngle": 9, + "PercentPhaseFOV": 80, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 512, + "PixelBandwidth": 558.047, + "ImageOrientationPatientDICOM": [ + 0, + 1, + 0, + 0.0276687, + 0, + -0.999617 + ], + "InPlanePhaseEncodingDirectionDICOM": "ROW", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-brnoUhb05/anat/sub-brnoUhb05_space-other_T2star.json b/derivatives/data_preprocessed/sub-brnoUhb05/anat/sub-brnoUhb05_space-other_T2star.json index e3c39f8dd4..6accb77065 100644 --- a/derivatives/data_preprocessed/sub-brnoUhb05/anat/sub-brnoUhb05_space-other_T2star.json +++ b/derivatives/data_preprocessed/sub-brnoUhb05/anat/sub-brnoUhb05_space-other_T2star.json @@ -45,5 +45,9 @@ "InPlanePhaseEncodingDirectionDICOM": "COL", "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0", - "AcquisitionDuration": 288.0 + "AcquisitionDuration": 288.0, + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-brnoUhb05/anat/sub-brnoUhb05_space-other_T2w.json b/derivatives/data_preprocessed/sub-brnoUhb05/anat/sub-brnoUhb05_space-other_T2w.json index 7388962ed0..74a54d76aa 100644 --- a/derivatives/data_preprocessed/sub-brnoUhb05/anat/sub-brnoUhb05_space-other_T2w.json +++ b/derivatives/data_preprocessed/sub-brnoUhb05/anat/sub-brnoUhb05_space-other_T2w.json @@ -1,42 +1,51 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "GE", - "ManufacturersModelName": "SIGNA_PET_MR", - "InstitutionName": "FN_Brno", - "DeviceSerialNumber": "000000CS1013MR01", - "StationName": "PETMR", - "PatientPosition": "HFS", - "SoftwareVersions": "26_LX_MR_Software_release:MP24.0_R03_1712.b", - "MRAcquisitionType": "3D", - "SeriesDescription": "T2w", - "ProtocolName": "T2w", - "ScanningSequence": "SE", - "SequenceVariant": "SK_OSP", - "ScanOptions": "FC_FREQ_AX_GEMS_FC_SAT_GEMS_NPW_EDR_GEMS_FILTERED_GEMS_ACC_GEMS", - "ImageType": ["ORIGINAL", "PRIMARY", "OTHER"], - "SeriesNumber": 4, - "AcquisitionTime": "13:07:46.000000", - "AcquisitionNumber": 1, - "SliceThickness": 0.8, - "SpacingBetweenSlices": 0.8, - "SAR": 0.859103, - "EchoTime": 0.131954, - "RepetitionTime": 2.5, - "FlipAngle": 90, - "PercentPhaseFOV": 100, - "EchoTrainLength": 78, - "AcquisitionMatrixPE": 320, - "ReconMatrixPE": 512, - "PixelBandwidth": 325.508, - "ImageOrientationPatientDICOM": [ - -0, - 1, - 0, - 0.0228165, - -0, - -0.99974 ], - "InPlanePhaseEncodingDirectionDICOM": "ROW", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "GE", + "ManufacturersModelName": "SIGNA_PET_MR", + "InstitutionName": "FN_Brno", + "DeviceSerialNumber": "000000CS1013MR01", + "StationName": "PETMR", + "PatientPosition": "HFS", + "SoftwareVersions": "26_LX_MR_Software_release:MP24.0_R03_1712.b", + "MRAcquisitionType": "3D", + "SeriesDescription": "T2w", + "ProtocolName": "T2w", + "ScanningSequence": "SE", + "SequenceVariant": "SK_OSP", + "ScanOptions": "FC_FREQ_AX_GEMS_FC_SAT_GEMS_NPW_EDR_GEMS_FILTERED_GEMS_ACC_GEMS", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "OTHER" + ], + "SeriesNumber": 4, + "AcquisitionTime": "13:07:46.000000", + "AcquisitionNumber": 1, + "SliceThickness": 0.8, + "SpacingBetweenSlices": 0.8, + "SAR": 0.859103, + "EchoTime": 0.131954, + "RepetitionTime": 2.5, + "FlipAngle": 90, + "PercentPhaseFOV": 100, + "EchoTrainLength": 78, + "AcquisitionMatrixPE": 320, + "ReconMatrixPE": 512, + "PixelBandwidth": 325.508, + "ImageOrientationPatientDICOM": [ + 0, + 1, + 0, + 0.0228165, + 0, + -0.99974 + ], + "InPlanePhaseEncodingDirectionDICOM": "ROW", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-brnoUhb06/anat/sub-brnoUhb06_flip-1_mt-on_space-other_MTS.json b/derivatives/data_preprocessed/sub-brnoUhb06/anat/sub-brnoUhb06_flip-1_mt-on_space-other_MTS.json index 93bec1cb76..8e1367b8d5 100644 --- a/derivatives/data_preprocessed/sub-brnoUhb06/anat/sub-brnoUhb06_flip-1_mt-on_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-brnoUhb06/anat/sub-brnoUhb06_flip-1_mt-on_space-other_MTS.json @@ -1,41 +1,49 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "GE", - "ManufacturersModelName": "SIGNA_PET_MR", - "InstitutionName": "FN_Brno", - "DeviceSerialNumber": "000000CS1013MR01", - "StationName": "PETMR", - "PatientPosition": "HFS", - "SoftwareVersions": "26_LX_MR_Software_release:MP24.0_R03_1712.b", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-MT1", - "ProtocolName": "GRE-MT1", - "ScanningSequence": "GR", - "SequenceVariant": "SS_SP", - "ScanOptions": "EDR_GEMS_MT_GEMS_FILTERED_GEMS_PFF", - "ImageType": ["ORIGINAL", "PRIMARY", "OTHER"], - "SeriesNumber": 7, - "AcquisitionTime": "14:28:8.000000", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SpacingBetweenSlices": 5, - "SAR": 1.88019, - "EchoTime": 0.004, - "RepetitionTime": 0.035, - "FlipAngle": 9, - "PercentPhaseFOV": 100, - "AcquisitionMatrixPE": 192, - "ReconMatrixPE": 256, - "PixelBandwidth": 325.547, - "ImageOrientationPatientDICOM": [ - 0.999437, - -0, - -0.0335595, - 0.00385139, - 0.993393, - 0.114698 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "GE", + "ManufacturersModelName": "SIGNA_PET_MR", + "InstitutionName": "FN_Brno", + "DeviceSerialNumber": "000000CS1013MR01", + "StationName": "PETMR", + "PatientPosition": "HFS", + "SoftwareVersions": "26_LX_MR_Software_release:MP24.0_R03_1712.b", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-MT1", + "ProtocolName": "GRE-MT1", + "ScanningSequence": "GR", + "SequenceVariant": "SS_SP", + "ScanOptions": "EDR_GEMS_MT_GEMS_FILTERED_GEMS_PFF", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "OTHER" + ], + "SeriesNumber": 7, + "AcquisitionTime": "14:28:8.000000", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SpacingBetweenSlices": 5, + "SAR": 1.88019, + "EchoTime": 0.004, + "RepetitionTime": 0.035, + "FlipAngle": 9, + "PercentPhaseFOV": 100, + "AcquisitionMatrixPE": 192, + "ReconMatrixPE": 256, + "PixelBandwidth": 325.547, + "ImageOrientationPatientDICOM": [ + 0.999437, + 0, + -0.0335595, + 0.00385139, + 0.993393, + 0.114698 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-brnoUhb06/anat/sub-brnoUhb06_flip-2_mt-off_space-other_MTS.json b/derivatives/data_preprocessed/sub-brnoUhb06/anat/sub-brnoUhb06_flip-2_mt-off_space-other_MTS.json index 89cfe92cc4..40d809612a 100644 --- a/derivatives/data_preprocessed/sub-brnoUhb06/anat/sub-brnoUhb06_flip-2_mt-off_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-brnoUhb06/anat/sub-brnoUhb06_flip-2_mt-off_space-other_MTS.json @@ -1,41 +1,49 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "GE", - "ManufacturersModelName": "SIGNA_PET_MR", - "InstitutionName": "FN_Brno", - "DeviceSerialNumber": "000000CS1013MR01", - "StationName": "PETMR", - "PatientPosition": "HFS", - "SoftwareVersions": "26_LX_MR_Software_release:MP24.0_R03_1712.b", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-T1w", - "ProtocolName": "GRE-T1w", - "ScanningSequence": "GR", - "SequenceVariant": "SS_SP", - "ScanOptions": "EDR_GEMS_FILTERED_GEMS_PFF", - "ImageType": ["ORIGINAL", "PRIMARY", "OTHER"], - "SeriesNumber": 6, - "AcquisitionTime": "14:26:7.000000", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SpacingBetweenSlices": 5, - "SAR": 0.0250354, - "EchoTime": 0.004, - "RepetitionTime": 0.018, - "FlipAngle": 15, - "PercentPhaseFOV": 100, - "AcquisitionMatrixPE": 192, - "ReconMatrixPE": 256, - "PixelBandwidth": 325.547, - "ImageOrientationPatientDICOM": [ - 0.999437, - -0, - -0.0335595, - 0.00385139, - 0.993393, - 0.114698 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "GE", + "ManufacturersModelName": "SIGNA_PET_MR", + "InstitutionName": "FN_Brno", + "DeviceSerialNumber": "000000CS1013MR01", + "StationName": "PETMR", + "PatientPosition": "HFS", + "SoftwareVersions": "26_LX_MR_Software_release:MP24.0_R03_1712.b", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-T1w", + "ProtocolName": "GRE-T1w", + "ScanningSequence": "GR", + "SequenceVariant": "SS_SP", + "ScanOptions": "EDR_GEMS_FILTERED_GEMS_PFF", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "OTHER" + ], + "SeriesNumber": 6, + "AcquisitionTime": "14:26:7.000000", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SpacingBetweenSlices": 5, + "SAR": 0.0250354, + "EchoTime": 0.004, + "RepetitionTime": 0.018, + "FlipAngle": 15, + "PercentPhaseFOV": 100, + "AcquisitionMatrixPE": 192, + "ReconMatrixPE": 256, + "PixelBandwidth": 325.547, + "ImageOrientationPatientDICOM": [ + 0.999437, + 0, + -0.0335595, + 0.00385139, + 0.993393, + 0.114698 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-brnoUhb06/anat/sub-brnoUhb06_space-other_T1w.json b/derivatives/data_preprocessed/sub-brnoUhb06/anat/sub-brnoUhb06_space-other_T1w.json index b4ef4722a5..9d09d1b1f3 100644 --- a/derivatives/data_preprocessed/sub-brnoUhb06/anat/sub-brnoUhb06_space-other_T1w.json +++ b/derivatives/data_preprocessed/sub-brnoUhb06/anat/sub-brnoUhb06_space-other_T1w.json @@ -1,42 +1,51 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "GE", - "ManufacturersModelName": "SIGNA_PET_MR", - "InstitutionName": "FN_Brno", - "DeviceSerialNumber": "000000CS1013MR01", - "StationName": "PETMR", - "PatientPosition": "HFS", - "SoftwareVersions": "26_LX_MR_Software_release:MP24.0_R03_1712.b", - "MRAcquisitionType": "3D", - "SeriesDescription": "T1w", - "ProtocolName": "T1w", - "ScanningSequence": "GR", - "SequenceVariant": "SS_SP_SK", - "ScanOptions": "FAST_GEMS_EDR_GEMS_FILTERED_GEMS_ACC_GEMS", - "ImageType": ["ORIGINAL", "PRIMARY", "OTHER"], - "SeriesNumber": 3, - "AcquisitionTime": "14:10:43.000000", - "AcquisitionNumber": 1, - "SliceThickness": 1, - "SpacingBetweenSlices": 1, - "SAR": 0.137717, - "EchoTime": 0.001844, - "RepetitionTime": 0.004764, - "InversionTime": 1, - "FlipAngle": 9, - "PercentPhaseFOV": 80, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 512, - "PixelBandwidth": 558.047, - "ImageOrientationPatientDICOM": [ - -0, - 1, - 0, - -0.0312463, - -0, - -0.999512 ], - "InPlanePhaseEncodingDirectionDICOM": "ROW", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "GE", + "ManufacturersModelName": "SIGNA_PET_MR", + "InstitutionName": "FN_Brno", + "DeviceSerialNumber": "000000CS1013MR01", + "StationName": "PETMR", + "PatientPosition": "HFS", + "SoftwareVersions": "26_LX_MR_Software_release:MP24.0_R03_1712.b", + "MRAcquisitionType": "3D", + "SeriesDescription": "T1w", + "ProtocolName": "T1w", + "ScanningSequence": "GR", + "SequenceVariant": "SS_SP_SK", + "ScanOptions": "FAST_GEMS_EDR_GEMS_FILTERED_GEMS_ACC_GEMS", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "OTHER" + ], + "SeriesNumber": 3, + "AcquisitionTime": "14:10:43.000000", + "AcquisitionNumber": 1, + "SliceThickness": 1, + "SpacingBetweenSlices": 1, + "SAR": 0.137717, + "EchoTime": 0.001844, + "RepetitionTime": 0.004764, + "InversionTime": 1, + "FlipAngle": 9, + "PercentPhaseFOV": 80, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 512, + "PixelBandwidth": 558.047, + "ImageOrientationPatientDICOM": [ + 0, + 1, + 0, + -0.0312463, + 0, + -0.999512 + ], + "InPlanePhaseEncodingDirectionDICOM": "ROW", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-brnoUhb06/anat/sub-brnoUhb06_space-other_T2star.json b/derivatives/data_preprocessed/sub-brnoUhb06/anat/sub-brnoUhb06_space-other_T2star.json index 90758bc9ce..220a4aad2b 100644 --- a/derivatives/data_preprocessed/sub-brnoUhb06/anat/sub-brnoUhb06_space-other_T2star.json +++ b/derivatives/data_preprocessed/sub-brnoUhb06/anat/sub-brnoUhb06_space-other_T2star.json @@ -45,5 +45,9 @@ "InPlanePhaseEncodingDirectionDICOM": "COL", "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0", - "AcquisitionDuration": 288.0 + "AcquisitionDuration": 288.0, + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-brnoUhb06/anat/sub-brnoUhb06_space-other_T2w.json b/derivatives/data_preprocessed/sub-brnoUhb06/anat/sub-brnoUhb06_space-other_T2w.json index 7e5f1e2595..86e89d446f 100644 --- a/derivatives/data_preprocessed/sub-brnoUhb06/anat/sub-brnoUhb06_space-other_T2w.json +++ b/derivatives/data_preprocessed/sub-brnoUhb06/anat/sub-brnoUhb06_space-other_T2w.json @@ -1,42 +1,51 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "GE", - "ManufacturersModelName": "SIGNA_PET_MR", - "InstitutionName": "FN_Brno", - "DeviceSerialNumber": "000000CS1013MR01", - "StationName": "PETMR", - "PatientPosition": "HFS", - "SoftwareVersions": "26_LX_MR_Software_release:MP24.0_R03_1712.b", - "MRAcquisitionType": "3D", - "SeriesDescription": "T2w", - "ProtocolName": "T2w", - "ScanningSequence": "SE", - "SequenceVariant": "SK_OSP", - "ScanOptions": "FC_FREQ_AX_GEMS_FC_SAT_GEMS_NPW_EDR_GEMS_FILTERED_GEMS_ACC_GEMS", - "ImageType": ["ORIGINAL", "PRIMARY", "OTHER"], - "SeriesNumber": 4, - "AcquisitionTime": "14:16:8.000000", - "AcquisitionNumber": 1, - "SliceThickness": 0.8, - "SpacingBetweenSlices": 0.8, - "SAR": 0.85225, - "EchoTime": 0.131345, - "RepetitionTime": 2.5, - "FlipAngle": 90, - "PercentPhaseFOV": 100, - "EchoTrainLength": 78, - "AcquisitionMatrixPE": 320, - "ReconMatrixPE": 512, - "PixelBandwidth": 325.508, - "ImageOrientationPatientDICOM": [ - -0, - 1, - 0, - -0.0386118, - -0, - -0.999254 ], - "InPlanePhaseEncodingDirectionDICOM": "ROW", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "GE", + "ManufacturersModelName": "SIGNA_PET_MR", + "InstitutionName": "FN_Brno", + "DeviceSerialNumber": "000000CS1013MR01", + "StationName": "PETMR", + "PatientPosition": "HFS", + "SoftwareVersions": "26_LX_MR_Software_release:MP24.0_R03_1712.b", + "MRAcquisitionType": "3D", + "SeriesDescription": "T2w", + "ProtocolName": "T2w", + "ScanningSequence": "SE", + "SequenceVariant": "SK_OSP", + "ScanOptions": "FC_FREQ_AX_GEMS_FC_SAT_GEMS_NPW_EDR_GEMS_FILTERED_GEMS_ACC_GEMS", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "OTHER" + ], + "SeriesNumber": 4, + "AcquisitionTime": "14:16:8.000000", + "AcquisitionNumber": 1, + "SliceThickness": 0.8, + "SpacingBetweenSlices": 0.8, + "SAR": 0.85225, + "EchoTime": 0.131345, + "RepetitionTime": 2.5, + "FlipAngle": 90, + "PercentPhaseFOV": 100, + "EchoTrainLength": 78, + "AcquisitionMatrixPE": 320, + "ReconMatrixPE": 512, + "PixelBandwidth": 325.508, + "ImageOrientationPatientDICOM": [ + 0, + 1, + 0, + -0.0386118, + 0, + -0.999254 + ], + "InPlanePhaseEncodingDirectionDICOM": "ROW", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-brnoUhb07/anat/sub-brnoUhb07_flip-1_mt-on_space-other_MTS.json b/derivatives/data_preprocessed/sub-brnoUhb07/anat/sub-brnoUhb07_flip-1_mt-on_space-other_MTS.json index fda04f3817..efa65eefeb 100644 --- a/derivatives/data_preprocessed/sub-brnoUhb07/anat/sub-brnoUhb07_flip-1_mt-on_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-brnoUhb07/anat/sub-brnoUhb07_flip-1_mt-on_space-other_MTS.json @@ -1,41 +1,49 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "GE", - "ManufacturersModelName": "SIGNA_PET_MR", - "InstitutionName": "FN_Brno", - "DeviceSerialNumber": "000000CS1013MR01", - "StationName": "PETMR", - "PatientPosition": "HFS", - "SoftwareVersions": "26_LX_MR_Software_release:MP24.0_R03_1712.b", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-MT1", - "ProtocolName": "GRE-MT1", - "ScanningSequence": "GR", - "SequenceVariant": "SS_SP", - "ScanOptions": "EDR_GEMS_MT_GEMS_FILTERED_GEMS_PFF", - "ImageType": ["ORIGINAL", "PRIMARY", "OTHER"], - "SeriesNumber": 7, - "AcquisitionTime": "15:25:37.000000", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SpacingBetweenSlices": 5, - "SAR": 1.93987, - "EchoTime": 0.004, - "RepetitionTime": 0.035, - "FlipAngle": 9, - "PercentPhaseFOV": 100, - "AcquisitionMatrixPE": 192, - "ReconMatrixPE": 256, - "PixelBandwidth": 325.547, - "ImageOrientationPatientDICOM": [ - 0.993248, - -0, - 0.116008, - -0.0168785, - 0.989359, - 0.144512 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "GE", + "ManufacturersModelName": "SIGNA_PET_MR", + "InstitutionName": "FN_Brno", + "DeviceSerialNumber": "000000CS1013MR01", + "StationName": "PETMR", + "PatientPosition": "HFS", + "SoftwareVersions": "26_LX_MR_Software_release:MP24.0_R03_1712.b", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-MT1", + "ProtocolName": "GRE-MT1", + "ScanningSequence": "GR", + "SequenceVariant": "SS_SP", + "ScanOptions": "EDR_GEMS_MT_GEMS_FILTERED_GEMS_PFF", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "OTHER" + ], + "SeriesNumber": 7, + "AcquisitionTime": "15:25:37.000000", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SpacingBetweenSlices": 5, + "SAR": 1.93987, + "EchoTime": 0.004, + "RepetitionTime": 0.035, + "FlipAngle": 9, + "PercentPhaseFOV": 100, + "AcquisitionMatrixPE": 192, + "ReconMatrixPE": 256, + "PixelBandwidth": 325.547, + "ImageOrientationPatientDICOM": [ + 0.993248, + 0, + 0.116008, + -0.0168785, + 0.989359, + 0.144512 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-brnoUhb07/anat/sub-brnoUhb07_flip-2_mt-off_space-other_MTS.json b/derivatives/data_preprocessed/sub-brnoUhb07/anat/sub-brnoUhb07_flip-2_mt-off_space-other_MTS.json index 230bfc6715..1a4b58899d 100644 --- a/derivatives/data_preprocessed/sub-brnoUhb07/anat/sub-brnoUhb07_flip-2_mt-off_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-brnoUhb07/anat/sub-brnoUhb07_flip-2_mt-off_space-other_MTS.json @@ -1,41 +1,49 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "GE", - "ManufacturersModelName": "SIGNA_PET_MR", - "InstitutionName": "FN_Brno", - "DeviceSerialNumber": "000000CS1013MR01", - "StationName": "PETMR", - "PatientPosition": "HFS", - "SoftwareVersions": "26_LX_MR_Software_release:MP24.0_R03_1712.b", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-T1w", - "ProtocolName": "GRE-T1w", - "ScanningSequence": "GR", - "SequenceVariant": "SS_SP", - "ScanOptions": "EDR_GEMS_FILTERED_GEMS_PFF", - "ImageType": ["ORIGINAL", "PRIMARY", "OTHER"], - "SeriesNumber": 6, - "AcquisitionTime": "15:23:36.000000", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SpacingBetweenSlices": 5, - "SAR": 0.0258302, - "EchoTime": 0.004, - "RepetitionTime": 0.018, - "FlipAngle": 15, - "PercentPhaseFOV": 100, - "AcquisitionMatrixPE": 192, - "ReconMatrixPE": 256, - "PixelBandwidth": 325.547, - "ImageOrientationPatientDICOM": [ - 0.993248, - -0, - 0.116008, - -0.0168785, - 0.989359, - 0.144512 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "GE", + "ManufacturersModelName": "SIGNA_PET_MR", + "InstitutionName": "FN_Brno", + "DeviceSerialNumber": "000000CS1013MR01", + "StationName": "PETMR", + "PatientPosition": "HFS", + "SoftwareVersions": "26_LX_MR_Software_release:MP24.0_R03_1712.b", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-T1w", + "ProtocolName": "GRE-T1w", + "ScanningSequence": "GR", + "SequenceVariant": "SS_SP", + "ScanOptions": "EDR_GEMS_FILTERED_GEMS_PFF", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "OTHER" + ], + "SeriesNumber": 6, + "AcquisitionTime": "15:23:36.000000", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SpacingBetweenSlices": 5, + "SAR": 0.0258302, + "EchoTime": 0.004, + "RepetitionTime": 0.018, + "FlipAngle": 15, + "PercentPhaseFOV": 100, + "AcquisitionMatrixPE": 192, + "ReconMatrixPE": 256, + "PixelBandwidth": 325.547, + "ImageOrientationPatientDICOM": [ + 0.993248, + 0, + 0.116008, + -0.0168785, + 0.989359, + 0.144512 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-brnoUhb07/anat/sub-brnoUhb07_space-other_T1w.json b/derivatives/data_preprocessed/sub-brnoUhb07/anat/sub-brnoUhb07_space-other_T1w.json index 103471b2fa..5981c2e0af 100644 --- a/derivatives/data_preprocessed/sub-brnoUhb07/anat/sub-brnoUhb07_space-other_T1w.json +++ b/derivatives/data_preprocessed/sub-brnoUhb07/anat/sub-brnoUhb07_space-other_T1w.json @@ -1,42 +1,51 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "GE", - "ManufacturersModelName": "SIGNA_PET_MR", - "InstitutionName": "FN_Brno", - "DeviceSerialNumber": "000000CS1013MR01", - "StationName": "PETMR", - "PatientPosition": "HFS", - "SoftwareVersions": "26_LX_MR_Software_release:MP24.0_R03_1712.b", - "MRAcquisitionType": "3D", - "SeriesDescription": "T1w", - "ProtocolName": "T1w", - "ScanningSequence": "GR", - "SequenceVariant": "SS_SP_SK", - "ScanOptions": "FAST_GEMS_EDR_GEMS_FILTERED_GEMS_ACC_GEMS", - "ImageType": ["ORIGINAL", "PRIMARY", "OTHER"], - "SeriesNumber": 3, - "AcquisitionTime": "15:08:49.000000", - "AcquisitionNumber": 1, - "SliceThickness": 1, - "SpacingBetweenSlices": 1, - "SAR": 0.141784, - "EchoTime": 0.001856, - "RepetitionTime": 0.004796, - "InversionTime": 1, - "FlipAngle": 9, - "PercentPhaseFOV": 80, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 512, - "PixelBandwidth": 558.047, - "ImageOrientationPatientDICOM": [ - -0, - 1, - 0, - 0.0495988, - -0, - -0.998769 ], - "InPlanePhaseEncodingDirectionDICOM": "ROW", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "GE", + "ManufacturersModelName": "SIGNA_PET_MR", + "InstitutionName": "FN_Brno", + "DeviceSerialNumber": "000000CS1013MR01", + "StationName": "PETMR", + "PatientPosition": "HFS", + "SoftwareVersions": "26_LX_MR_Software_release:MP24.0_R03_1712.b", + "MRAcquisitionType": "3D", + "SeriesDescription": "T1w", + "ProtocolName": "T1w", + "ScanningSequence": "GR", + "SequenceVariant": "SS_SP_SK", + "ScanOptions": "FAST_GEMS_EDR_GEMS_FILTERED_GEMS_ACC_GEMS", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "OTHER" + ], + "SeriesNumber": 3, + "AcquisitionTime": "15:08:49.000000", + "AcquisitionNumber": 1, + "SliceThickness": 1, + "SpacingBetweenSlices": 1, + "SAR": 0.141784, + "EchoTime": 0.001856, + "RepetitionTime": 0.004796, + "InversionTime": 1, + "FlipAngle": 9, + "PercentPhaseFOV": 80, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 512, + "PixelBandwidth": 558.047, + "ImageOrientationPatientDICOM": [ + 0, + 1, + 0, + 0.0495988, + 0, + -0.998769 + ], + "InPlanePhaseEncodingDirectionDICOM": "ROW", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-brnoUhb07/anat/sub-brnoUhb07_space-other_T2star.json b/derivatives/data_preprocessed/sub-brnoUhb07/anat/sub-brnoUhb07_space-other_T2star.json index 88b4f2f4c6..b9a5cbf9bc 100644 --- a/derivatives/data_preprocessed/sub-brnoUhb07/anat/sub-brnoUhb07_space-other_T2star.json +++ b/derivatives/data_preprocessed/sub-brnoUhb07/anat/sub-brnoUhb07_space-other_T2star.json @@ -45,5 +45,9 @@ "InPlanePhaseEncodingDirectionDICOM": "COL", "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0", - "AcquisitionDuration": 288.0 + "AcquisitionDuration": 288.0, + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-brnoUhb07/anat/sub-brnoUhb07_space-other_T2w.json b/derivatives/data_preprocessed/sub-brnoUhb07/anat/sub-brnoUhb07_space-other_T2w.json index 174242d5c2..a2016ceba3 100644 --- a/derivatives/data_preprocessed/sub-brnoUhb07/anat/sub-brnoUhb07_space-other_T2w.json +++ b/derivatives/data_preprocessed/sub-brnoUhb07/anat/sub-brnoUhb07_space-other_T2w.json @@ -1,42 +1,51 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "GE", - "ManufacturersModelName": "SIGNA_PET_MR", - "InstitutionName": "FN_Brno", - "DeviceSerialNumber": "000000CS1013MR01", - "StationName": "PETMR", - "PatientPosition": "HFS", - "SoftwareVersions": "26_LX_MR_Software_release:MP24.0_R03_1712.b", - "MRAcquisitionType": "3D", - "SeriesDescription": "T2w", - "ProtocolName": "T2w", - "ScanningSequence": "SE", - "SequenceVariant": "SK_OSP", - "ScanOptions": "FC_FREQ_AX_GEMS_FC_SAT_GEMS_NPW_EDR_GEMS_FILTERED_GEMS_ACC_GEMS", - "ImageType": ["ORIGINAL", "PRIMARY", "OTHER"], - "SeriesNumber": 4, - "AcquisitionTime": "15:14:16.000000", - "AcquisitionNumber": 1, - "SliceThickness": 0.8, - "SpacingBetweenSlices": 0.8, - "SAR": 0.851203, - "EchoTime": 0.131802, - "RepetitionTime": 2.5, - "FlipAngle": 90, - "PercentPhaseFOV": 100, - "EchoTrainLength": 78, - "AcquisitionMatrixPE": 320, - "ReconMatrixPE": 512, - "PixelBandwidth": 325.508, - "ImageOrientationPatientDICOM": [ - -0, - 1, - 0, - 0.0505232, - -0, - -0.998723 ], - "InPlanePhaseEncodingDirectionDICOM": "ROW", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "GE", + "ManufacturersModelName": "SIGNA_PET_MR", + "InstitutionName": "FN_Brno", + "DeviceSerialNumber": "000000CS1013MR01", + "StationName": "PETMR", + "PatientPosition": "HFS", + "SoftwareVersions": "26_LX_MR_Software_release:MP24.0_R03_1712.b", + "MRAcquisitionType": "3D", + "SeriesDescription": "T2w", + "ProtocolName": "T2w", + "ScanningSequence": "SE", + "SequenceVariant": "SK_OSP", + "ScanOptions": "FC_FREQ_AX_GEMS_FC_SAT_GEMS_NPW_EDR_GEMS_FILTERED_GEMS_ACC_GEMS", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "OTHER" + ], + "SeriesNumber": 4, + "AcquisitionTime": "15:14:16.000000", + "AcquisitionNumber": 1, + "SliceThickness": 0.8, + "SpacingBetweenSlices": 0.8, + "SAR": 0.851203, + "EchoTime": 0.131802, + "RepetitionTime": 2.5, + "FlipAngle": 90, + "PercentPhaseFOV": 100, + "EchoTrainLength": 78, + "AcquisitionMatrixPE": 320, + "ReconMatrixPE": 512, + "PixelBandwidth": 325.508, + "ImageOrientationPatientDICOM": [ + 0, + 1, + 0, + 0.0505232, + 0, + -0.998723 + ], + "InPlanePhaseEncodingDirectionDICOM": "ROW", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-brnoUhb08/anat/sub-brnoUhb08_flip-1_mt-on_space-other_MTS.json b/derivatives/data_preprocessed/sub-brnoUhb08/anat/sub-brnoUhb08_flip-1_mt-on_space-other_MTS.json index 1c30ab8558..da600f127d 100644 --- a/derivatives/data_preprocessed/sub-brnoUhb08/anat/sub-brnoUhb08_flip-1_mt-on_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-brnoUhb08/anat/sub-brnoUhb08_flip-1_mt-on_space-other_MTS.json @@ -1,41 +1,49 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "GE", - "ManufacturersModelName": "SIGNA_PET_MR", - "InstitutionName": "FN_Brno", - "DeviceSerialNumber": "000000CS1013MR01", - "StationName": "PETMR", - "PatientPosition": "HFS", - "SoftwareVersions": "26_LX_MR_Software_release:MP24.0_R03_1712.b", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-MT1", - "ProtocolName": "GRE-MT1", - "ScanningSequence": "GR", - "SequenceVariant": "SS_SP", - "ScanOptions": "EDR_GEMS_MT_GEMS_FILTERED_GEMS_PFF", - "ImageType": ["ORIGINAL", "PRIMARY", "OTHER"], - "SeriesNumber": 7, - "AcquisitionTime": "16:30:19.000000", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SpacingBetweenSlices": 5, - "SAR": 2.02941, - "EchoTime": 0.004, - "RepetitionTime": 0.035, - "FlipAngle": 9, - "PercentPhaseFOV": 100, - "AcquisitionMatrixPE": 192, - "ReconMatrixPE": 256, - "PixelBandwidth": 325.547, - "ImageOrientationPatientDICOM": [ - 0.999679, - -0, - 0.0253235, - -0.00495659, - 0.980657, - 0.195669 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "GE", + "ManufacturersModelName": "SIGNA_PET_MR", + "InstitutionName": "FN_Brno", + "DeviceSerialNumber": "000000CS1013MR01", + "StationName": "PETMR", + "PatientPosition": "HFS", + "SoftwareVersions": "26_LX_MR_Software_release:MP24.0_R03_1712.b", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-MT1", + "ProtocolName": "GRE-MT1", + "ScanningSequence": "GR", + "SequenceVariant": "SS_SP", + "ScanOptions": "EDR_GEMS_MT_GEMS_FILTERED_GEMS_PFF", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "OTHER" + ], + "SeriesNumber": 7, + "AcquisitionTime": "16:30:19.000000", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SpacingBetweenSlices": 5, + "SAR": 2.02941, + "EchoTime": 0.004, + "RepetitionTime": 0.035, + "FlipAngle": 9, + "PercentPhaseFOV": 100, + "AcquisitionMatrixPE": 192, + "ReconMatrixPE": 256, + "PixelBandwidth": 325.547, + "ImageOrientationPatientDICOM": [ + 0.999679, + 0, + 0.0253235, + -0.00495659, + 0.980657, + 0.195669 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-brnoUhb08/anat/sub-brnoUhb08_flip-2_mt-off_space-other_MTS.json b/derivatives/data_preprocessed/sub-brnoUhb08/anat/sub-brnoUhb08_flip-2_mt-off_space-other_MTS.json index 16669d1210..5898260d73 100644 --- a/derivatives/data_preprocessed/sub-brnoUhb08/anat/sub-brnoUhb08_flip-2_mt-off_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-brnoUhb08/anat/sub-brnoUhb08_flip-2_mt-off_space-other_MTS.json @@ -1,41 +1,49 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "GE", - "ManufacturersModelName": "SIGNA_PET_MR", - "InstitutionName": "FN_Brno", - "DeviceSerialNumber": "000000CS1013MR01", - "StationName": "PETMR", - "PatientPosition": "HFS", - "SoftwareVersions": "26_LX_MR_Software_release:MP24.0_R03_1712.b", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-T1w", - "ProtocolName": "GRE-T1w", - "ScanningSequence": "GR", - "SequenceVariant": "SS_SP", - "ScanOptions": "EDR_GEMS_FILTERED_GEMS_PFF", - "ImageType": ["ORIGINAL", "PRIMARY", "OTHER"], - "SeriesNumber": 6, - "AcquisitionTime": "16:28:18.000000", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SpacingBetweenSlices": 5, - "SAR": 0.0270223, - "EchoTime": 0.004, - "RepetitionTime": 0.018, - "FlipAngle": 15, - "PercentPhaseFOV": 100, - "AcquisitionMatrixPE": 192, - "ReconMatrixPE": 256, - "PixelBandwidth": 325.547, - "ImageOrientationPatientDICOM": [ - 0.999679, - -0, - 0.0253235, - -0.00495659, - 0.980657, - 0.195669 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "GE", + "ManufacturersModelName": "SIGNA_PET_MR", + "InstitutionName": "FN_Brno", + "DeviceSerialNumber": "000000CS1013MR01", + "StationName": "PETMR", + "PatientPosition": "HFS", + "SoftwareVersions": "26_LX_MR_Software_release:MP24.0_R03_1712.b", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-T1w", + "ProtocolName": "GRE-T1w", + "ScanningSequence": "GR", + "SequenceVariant": "SS_SP", + "ScanOptions": "EDR_GEMS_FILTERED_GEMS_PFF", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "OTHER" + ], + "SeriesNumber": 6, + "AcquisitionTime": "16:28:18.000000", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SpacingBetweenSlices": 5, + "SAR": 0.0270223, + "EchoTime": 0.004, + "RepetitionTime": 0.018, + "FlipAngle": 15, + "PercentPhaseFOV": 100, + "AcquisitionMatrixPE": 192, + "ReconMatrixPE": 256, + "PixelBandwidth": 325.547, + "ImageOrientationPatientDICOM": [ + 0.999679, + 0, + 0.0253235, + -0.00495659, + 0.980657, + 0.195669 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-brnoUhb08/anat/sub-brnoUhb08_space-other_T1w.json b/derivatives/data_preprocessed/sub-brnoUhb08/anat/sub-brnoUhb08_space-other_T1w.json index e40048d3b3..22e377a5c4 100644 --- a/derivatives/data_preprocessed/sub-brnoUhb08/anat/sub-brnoUhb08_space-other_T1w.json +++ b/derivatives/data_preprocessed/sub-brnoUhb08/anat/sub-brnoUhb08_space-other_T1w.json @@ -1,42 +1,51 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "GE", - "ManufacturersModelName": "SIGNA_PET_MR", - "InstitutionName": "FN_Brno", - "DeviceSerialNumber": "000000CS1013MR01", - "StationName": "PETMR", - "PatientPosition": "HFS", - "SoftwareVersions": "26_LX_MR_Software_release:MP24.0_R03_1712.b", - "MRAcquisitionType": "3D", - "SeriesDescription": "T1w", - "ProtocolName": "T1w", - "ScanningSequence": "GR", - "SequenceVariant": "SS_SP_SK", - "ScanOptions": "FAST_GEMS_EDR_GEMS_FILTERED_GEMS_ACC_GEMS", - "ImageType": ["ORIGINAL", "PRIMARY", "OTHER"], - "SeriesNumber": 3, - "AcquisitionTime": "16:12:4.000000", - "AcquisitionNumber": 1, - "SliceThickness": 1, - "SpacingBetweenSlices": 1, - "SAR": 0.148448, - "EchoTime": 0.00186, - "RepetitionTime": 0.004784, - "InversionTime": 1, - "FlipAngle": 9, - "PercentPhaseFOV": 80, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 512, - "PixelBandwidth": 558.047, - "ImageOrientationPatientDICOM": [ - -0, - 1, - 0, - 0.0305536, - -0, - -0.999533 ], - "InPlanePhaseEncodingDirectionDICOM": "ROW", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "GE", + "ManufacturersModelName": "SIGNA_PET_MR", + "InstitutionName": "FN_Brno", + "DeviceSerialNumber": "000000CS1013MR01", + "StationName": "PETMR", + "PatientPosition": "HFS", + "SoftwareVersions": "26_LX_MR_Software_release:MP24.0_R03_1712.b", + "MRAcquisitionType": "3D", + "SeriesDescription": "T1w", + "ProtocolName": "T1w", + "ScanningSequence": "GR", + "SequenceVariant": "SS_SP_SK", + "ScanOptions": "FAST_GEMS_EDR_GEMS_FILTERED_GEMS_ACC_GEMS", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "OTHER" + ], + "SeriesNumber": 3, + "AcquisitionTime": "16:12:4.000000", + "AcquisitionNumber": 1, + "SliceThickness": 1, + "SpacingBetweenSlices": 1, + "SAR": 0.148448, + "EchoTime": 0.00186, + "RepetitionTime": 0.004784, + "InversionTime": 1, + "FlipAngle": 9, + "PercentPhaseFOV": 80, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 512, + "PixelBandwidth": 558.047, + "ImageOrientationPatientDICOM": [ + 0, + 1, + 0, + 0.0305536, + 0, + -0.999533 + ], + "InPlanePhaseEncodingDirectionDICOM": "ROW", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-brnoUhb08/anat/sub-brnoUhb08_space-other_T2star.json b/derivatives/data_preprocessed/sub-brnoUhb08/anat/sub-brnoUhb08_space-other_T2star.json index b92e714609..fa4cbb31d5 100644 --- a/derivatives/data_preprocessed/sub-brnoUhb08/anat/sub-brnoUhb08_space-other_T2star.json +++ b/derivatives/data_preprocessed/sub-brnoUhb08/anat/sub-brnoUhb08_space-other_T2star.json @@ -45,5 +45,9 @@ "InPlanePhaseEncodingDirectionDICOM": "COL", "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0", - "AcquisitionDuration": 288.0 + "AcquisitionDuration": 288.0, + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-brnoUhb08/anat/sub-brnoUhb08_space-other_T2w.json b/derivatives/data_preprocessed/sub-brnoUhb08/anat/sub-brnoUhb08_space-other_T2w.json index 38adfed32f..c1708c07f4 100644 --- a/derivatives/data_preprocessed/sub-brnoUhb08/anat/sub-brnoUhb08_space-other_T2w.json +++ b/derivatives/data_preprocessed/sub-brnoUhb08/anat/sub-brnoUhb08_space-other_T2w.json @@ -1,42 +1,51 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "GE", - "ManufacturersModelName": "SIGNA_PET_MR", - "InstitutionName": "FN_Brno", - "DeviceSerialNumber": "000000CS1013MR01", - "StationName": "PETMR", - "PatientPosition": "HFS", - "SoftwareVersions": "26_LX_MR_Software_release:MP24.0_R03_1712.b", - "MRAcquisitionType": "3D", - "SeriesDescription": "T2w", - "ProtocolName": "T2w", - "ScanningSequence": "SE", - "SequenceVariant": "SK_OSP", - "ScanOptions": "FC_FREQ_AX_GEMS_FC_SAT_GEMS_NPW_EDR_GEMS_FILTERED_GEMS_ACC_GEMS", - "ImageType": ["ORIGINAL", "PRIMARY", "OTHER"], - "SeriesNumber": 4, - "AcquisitionTime": "16:17:43.000000", - "AcquisitionNumber": 1, - "SliceThickness": 0.8, - "SpacingBetweenSlices": 0.8, - "SAR": 0.849782, - "EchoTime": 0.131345, - "RepetitionTime": 2.5, - "FlipAngle": 90, - "PercentPhaseFOV": 100, - "EchoTrainLength": 78, - "AcquisitionMatrixPE": 320, - "ReconMatrixPE": 512, - "PixelBandwidth": 325.508, - "ImageOrientationPatientDICOM": [ - -0, - 1, - 0, - 0.0250666, - -0, - -0.999686 ], - "InPlanePhaseEncodingDirectionDICOM": "ROW", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "GE", + "ManufacturersModelName": "SIGNA_PET_MR", + "InstitutionName": "FN_Brno", + "DeviceSerialNumber": "000000CS1013MR01", + "StationName": "PETMR", + "PatientPosition": "HFS", + "SoftwareVersions": "26_LX_MR_Software_release:MP24.0_R03_1712.b", + "MRAcquisitionType": "3D", + "SeriesDescription": "T2w", + "ProtocolName": "T2w", + "ScanningSequence": "SE", + "SequenceVariant": "SK_OSP", + "ScanOptions": "FC_FREQ_AX_GEMS_FC_SAT_GEMS_NPW_EDR_GEMS_FILTERED_GEMS_ACC_GEMS", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "OTHER" + ], + "SeriesNumber": 4, + "AcquisitionTime": "16:17:43.000000", + "AcquisitionNumber": 1, + "SliceThickness": 0.8, + "SpacingBetweenSlices": 0.8, + "SAR": 0.849782, + "EchoTime": 0.131345, + "RepetitionTime": 2.5, + "FlipAngle": 90, + "PercentPhaseFOV": 100, + "EchoTrainLength": 78, + "AcquisitionMatrixPE": 320, + "ReconMatrixPE": 512, + "PixelBandwidth": 325.508, + "ImageOrientationPatientDICOM": [ + 0, + 1, + 0, + 0.0250666, + 0, + -0.999686 + ], + "InPlanePhaseEncodingDirectionDICOM": "ROW", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-cardiff01/anat/sub-cardiff01_flip-1_mt-on_space-other_MTS.json b/derivatives/data_preprocessed/sub-cardiff01/anat/sub-cardiff01_flip-1_mt-on_space-other_MTS.json index 1e587fa04c..149410b2a7 100644 --- a/derivatives/data_preprocessed/sub-cardiff01/anat/sub-cardiff01_flip-1_mt-on_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-cardiff01/anat/sub-cardiff01_flip-1_mt-on_space-other_MTS.json @@ -1,74 +1,77 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.253, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma", - "InstitutionName": "CUBRIC", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "Maindy_Road_CARDIFF_Wales_GB_CF24_4HQ", - "DeviceSerialNumber": "66073", - "StationName": "AWP66073", - "BodyPartExamined": "CSPINE", - "PatientPosition": "HFS", - "ProcedureStepDescription": "3TWproj_324_SpinalCord", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-MT1", - "ProtocolName": "GRE-MT1", - "ScanningSequence": "GR", - "SequenceVariant": "MTC_SP", - "ScanOptions": "MT", - "SequenceName": "_fl3d1", + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 123.253, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma", + "InstitutionName": "CUBRIC", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "Maindy_Road_CARDIFF_Wales_GB_CF24_4HQ", + "DeviceSerialNumber": "66073", + "StationName": "AWP66073", + "BodyPartExamined": "CSPINE", + "PatientPosition": "HFS", + "ProcedureStepDescription": "3TWproj_324_SpinalCord", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-MT1", + "ProtocolName": "GRE-MT1", + "ScanningSequence": "GR", + "SequenceVariant": "MTC_SP", + "ScanOptions": "MT", + "SequenceName": "_fl3d1", "ImageType": [ - "ORIGINAL", - "PRIMARY", - "M", + "ORIGINAL", + "PRIMARY", + "M", "DIS2D" - ], - "SeriesNumber": 5, - "AcquisitionTime": "14:35:59.970000", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SAR": 0.488639, - "EchoTime": 0.00313, - "RepetitionTime": 0.035, - "FlipAngle": 9, - "PartialFourier": 1, - "BaseResolution": 256, + ], + "SeriesNumber": 5, + "AcquisitionTime": "14:35:59.970000", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SAR": 0.488639, + "EchoTime": 0.00313, + "RepetitionTime": 0.035, + "FlipAngle": 9, + "PartialFourier": 1, + "BaseResolution": 256, "ShimSetting": [ - 9763, - 46, - -2932, - -539, - 138, - 2100, - -630, + 9763, + 46, + -2932, + -539, + 138, + 2100, + -630, 97 - ], - "TxRefAmp": 305.959, - "PhaseResolution": 1, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC7;NC1,2", - "CoilString": "HC7;NC1_2", - "PulseSequenceDetails": "%SiemensSeq%_gre", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 100, - "PhaseEncodingSteps": 255, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 256, - "PixelBandwidth": 260, - "DwellTime": 7.5e-06, + ], + "TxRefAmp": 305.959, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC7;NC1,2", + "CoilString": "HC7;NC1_2", + "PulseSequenceDetails": "%SiemensSeq%_gre", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 255, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "PixelBandwidth": 260, + "DwellTime": 7.5e-06, "ImageOrientationPatientDICOM": [ - 1, - 0, - 0, - 0, - 0.998135, + 1, + 0, + 0, + 0, + 0.998135, 0.0610485 - ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181125 (JP2:OpenJPEG) (JP-LS:CharLS) Clang8.1.0", - "Dcm2bidsVersion": "2.1.4" + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181125 (JP2:OpenJPEG) (JP-LS:CharLS) Clang8.1.0", + "Dcm2bidsVersion": "2.1.4", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-cardiff01/anat/sub-cardiff01_flip-2_mt-off_space-other_MTS.json b/derivatives/data_preprocessed/sub-cardiff01/anat/sub-cardiff01_flip-2_mt-off_space-other_MTS.json index fa270a9178..68ddb79873 100644 --- a/derivatives/data_preprocessed/sub-cardiff01/anat/sub-cardiff01_flip-2_mt-off_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-cardiff01/anat/sub-cardiff01_flip-2_mt-off_space-other_MTS.json @@ -1,73 +1,76 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.253, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma", - "InstitutionName": "CUBRIC", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "Maindy_Road_CARDIFF_Wales_GB_CF24_4HQ", - "DeviceSerialNumber": "66073", - "StationName": "AWP66073", - "BodyPartExamined": "CSPINE", - "PatientPosition": "HFS", - "ProcedureStepDescription": "3TWproj_324_SpinalCord", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-T1w", - "ProtocolName": "GRE-T1w", - "ScanningSequence": "GR", - "SequenceVariant": "SP", - "SequenceName": "_fl3d1", + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 123.253, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma", + "InstitutionName": "CUBRIC", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "Maindy_Road_CARDIFF_Wales_GB_CF24_4HQ", + "DeviceSerialNumber": "66073", + "StationName": "AWP66073", + "BodyPartExamined": "CSPINE", + "PatientPosition": "HFS", + "ProcedureStepDescription": "3TWproj_324_SpinalCord", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-T1w", + "ProtocolName": "GRE-T1w", + "ScanningSequence": "GR", + "SequenceVariant": "SP", + "SequenceName": "_fl3d1", "ImageType": [ - "ORIGINAL", - "PRIMARY", - "M", + "ORIGINAL", + "PRIMARY", + "M", "DIS2D" - ], - "SeriesNumber": 7, - "AcquisitionTime": "14:40:24.955000", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SAR": 0.0316818, - "EchoTime": 0.00313, - "RepetitionTime": 0.015, - "FlipAngle": 15, - "PartialFourier": 1, - "BaseResolution": 256, + ], + "SeriesNumber": 7, + "AcquisitionTime": "14:40:24.955000", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SAR": 0.0316818, + "EchoTime": 0.00313, + "RepetitionTime": 0.015, + "FlipAngle": 15, + "PartialFourier": 1, + "BaseResolution": 256, "ShimSetting": [ - 9763, - 46, - -2932, - -539, - 138, - 2100, - -630, + 9763, + 46, + -2932, + -539, + 138, + 2100, + -630, 97 - ], - "TxRefAmp": 305.959, - "PhaseResolution": 1, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC7;NC1,2", - "CoilString": "HC7;NC1_2", - "PulseSequenceDetails": "%SiemensSeq%_gre", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 100, - "PhaseEncodingSteps": 255, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 256, - "PixelBandwidth": 260, - "DwellTime": 7.5e-06, + ], + "TxRefAmp": 305.959, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC7;NC1,2", + "CoilString": "HC7;NC1_2", + "PulseSequenceDetails": "%SiemensSeq%_gre", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 255, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "PixelBandwidth": 260, + "DwellTime": 7.5e-06, "ImageOrientationPatientDICOM": [ - 1, - 0, - 0, - 0, - 0.998135, + 1, + 0, + 0, + 0, + 0.998135, 0.0610485 - ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181125 (JP2:OpenJPEG) (JP-LS:CharLS) Clang8.1.0", - "Dcm2bidsVersion": "2.1.4" + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181125 (JP2:OpenJPEG) (JP-LS:CharLS) Clang8.1.0", + "Dcm2bidsVersion": "2.1.4", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-cardiff01/anat/sub-cardiff01_space-other_T1w.json b/derivatives/data_preprocessed/sub-cardiff01/anat/sub-cardiff01_space-other_T1w.json index 54e76be811..2390ba57f2 100644 --- a/derivatives/data_preprocessed/sub-cardiff01/anat/sub-cardiff01_space-other_T1w.json +++ b/derivatives/data_preprocessed/sub-cardiff01/anat/sub-cardiff01_space-other_T1w.json @@ -1,77 +1,81 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.253, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma", - "InstitutionName": "CUBRIC", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "Maindy_Road_CARDIFF_Wales_GB_CF24_4HQ", - "DeviceSerialNumber": "66073", - "StationName": "AWP66073", - "BodyPartExamined": "CSPINE", - "PatientPosition": "HFS", - "ProcedureStepDescription": "3TWproj_324_SpinalCord", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "T1w", - "ProtocolName": "T1w", - "ScanningSequence": "GR_IR", - "SequenceVariant": "SK_SP_MP", - "ScanOptions": "IR", - "SequenceName": "_tfl3d1_16", + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 123.253, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma", + "InstitutionName": "CUBRIC", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "Maindy_Road_CARDIFF_Wales_GB_CF24_4HQ", + "DeviceSerialNumber": "66073", + "StationName": "AWP66073", + "BodyPartExamined": "CSPINE", + "PatientPosition": "HFS", + "ProcedureStepDescription": "3TWproj_324_SpinalCord", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "T1w", + "ProtocolName": "T1w", + "ScanningSequence": "GR_IR", + "SequenceVariant": "SK_SP_MP", + "ScanOptions": "IR", + "SequenceName": "_tfl3d1_16", "ImageType": [ - "ORIGINAL", - "PRIMARY", - "M", - "NORM", - "DIS3D", + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS3D", "DIS2D" - ], - "SeriesNumber": 2, - "AcquisitionTime": "14:20:20.040000", - "AcquisitionNumber": 1, - "SliceThickness": 1, - "SAR": 0.061538, - "EchoTime": 0.00372, - "RepetitionTime": 2, - "InversionTime": 1, - "FlipAngle": 9, - "PartialFourier": 1, - "BaseResolution": 320, + ], + "SeriesNumber": 2, + "AcquisitionTime": "14:20:20.040000", + "AcquisitionNumber": 1, + "SliceThickness": 1, + "SAR": 0.061538, + "EchoTime": 0.00372, + "RepetitionTime": 2, + "InversionTime": 1, + "FlipAngle": 9, + "PartialFourier": 1, + "BaseResolution": 320, "ShimSetting": [ - 9807, - 59, - -2898, - 41, - 24, - -25, - -19, + 9807, + 59, + -2898, + 41, + 24, + -25, + -19, 28 - ], - "TxRefAmp": 297.816, - "PhaseResolution": 1, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC1-7;NC1,2", - "CoilString": "HC1-7;NC1_2", - "PulseSequenceDetails": "%SiemensSeq%_tfl", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 81.25, - "PhaseEncodingSteps": 259, - "AcquisitionMatrixPE": 260, - "ReconMatrixPE": 320, - "PixelBandwidth": 150, - "DwellTime": 1.04e-05, + ], + "TxRefAmp": 297.816, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC1-7;NC1,2", + "CoilString": "HC1-7;NC1_2", + "PulseSequenceDetails": "%SiemensSeq%_tfl", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 81.25, + "PhaseEncodingSteps": 259, + "AcquisitionMatrixPE": 260, + "ReconMatrixPE": 320, + "PixelBandwidth": 150, + "DwellTime": 1.04e-05, "ImageOrientationPatientDICOM": [ - 0, - 1, - 0, - 0, - 0, + 0, + 1, + 0, + 0, + 0, -1 - ], - "InPlanePhaseEncodingDirectionDICOM": "ROW", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181125 (JP2:OpenJPEG) (JP-LS:CharLS) Clang8.1.0", - "Dcm2bidsVersion": "2.1.4" + ], + "InPlanePhaseEncodingDirectionDICOM": "ROW", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181125 (JP2:OpenJPEG) (JP-LS:CharLS) Clang8.1.0", + "Dcm2bidsVersion": "2.1.4", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-cardiff01/anat/sub-cardiff01_space-other_T2star.json b/derivatives/data_preprocessed/sub-cardiff01/anat/sub-cardiff01_space-other_T2star.json index aeea0e1e6c..27e6e206ed 100644 --- a/derivatives/data_preprocessed/sub-cardiff01/anat/sub-cardiff01_space-other_T2star.json +++ b/derivatives/data_preprocessed/sub-cardiff01/anat/sub-cardiff01_space-other_T2star.json @@ -76,5 +76,9 @@ "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20181125 (JP2:OpenJPEG) (JP-LS:CharLS) Clang8.1.0", "Dcm2bidsVersion": "2.1.4", - "AcquisitionDuration": 285.0 + "AcquisitionDuration": 285.0, + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-cardiff01/anat/sub-cardiff01_space-other_T2w.json b/derivatives/data_preprocessed/sub-cardiff01/anat/sub-cardiff01_space-other_T2w.json index ebad1392a7..f12016fcf2 100644 --- a/derivatives/data_preprocessed/sub-cardiff01/anat/sub-cardiff01_space-other_T2w.json +++ b/derivatives/data_preprocessed/sub-cardiff01/anat/sub-cardiff01_space-other_T2w.json @@ -1,78 +1,82 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.253, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma", - "InstitutionName": "CUBRIC", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "Maindy_Road_CARDIFF_Wales_GB_CF24_4HQ", - "DeviceSerialNumber": "66073", - "StationName": "AWP66073", - "BodyPartExamined": "CSPINE", - "PatientPosition": "HFS", - "ProcedureStepDescription": "3TWproj_324_SpinalCord", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "T2w", - "ProtocolName": "T2w", - "ScanningSequence": "SE", - "SequenceVariant": "SK_SP_OSP", - "ScanOptions": "PFP", - "SequenceName": "_spcR_100", + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 123.253, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma", + "InstitutionName": "CUBRIC", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "Maindy_Road_CARDIFF_Wales_GB_CF24_4HQ", + "DeviceSerialNumber": "66073", + "StationName": "AWP66073", + "BodyPartExamined": "CSPINE", + "PatientPosition": "HFS", + "ProcedureStepDescription": "3TWproj_324_SpinalCord", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "T2w", + "ProtocolName": "T2w", + "ScanningSequence": "SE", + "SequenceVariant": "SK_SP_OSP", + "ScanOptions": "PFP", + "SequenceName": "_spcR_100", "ImageType": [ - "ORIGINAL", - "PRIMARY", - "M", - "NORM", - "DIS3D", + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS3D", "DIS2D" - ], - "SeriesNumber": 3, - "AcquisitionTime": "14:27:27.700000", - "AcquisitionNumber": 1, - "SliceThickness": 0.8, - "SAR": 0.494045, - "EchoTime": 0.12, - "RepetitionTime": 1.5, - "FlipAngle": 120, - "PartialFourier": 1, - "BaseResolution": 320, + ], + "SeriesNumber": 3, + "AcquisitionTime": "14:27:27.700000", + "AcquisitionNumber": 1, + "SliceThickness": 0.8, + "SAR": 0.494045, + "EchoTime": 0.12, + "RepetitionTime": 1.5, + "FlipAngle": 120, + "PartialFourier": 1, + "BaseResolution": 320, "ShimSetting": [ - 9807, - 59, - -2898, - 41, - 24, - -25, - -19, + 9807, + 59, + -2898, + 41, + 24, + -25, + -19, 28 - ], - "TxRefAmp": 305.959, - "PhaseResolution": 1, - "PhaseOversampling": 0.8, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC5-7;NC1,2", - "CoilString": "HC5-7;NC1_2", - "PulseSequenceDetails": "%SiemensSeq%_tse_vfl", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 100, - "EchoTrainLength": 76, - "PhaseEncodingSteps": 422, - "AcquisitionMatrixPE": 320, - "ReconMatrixPE": 320, - "PixelBandwidth": 625, - "DwellTime": 2.5e-06, + ], + "TxRefAmp": 305.959, + "PhaseResolution": 1, + "PhaseOversampling": 0.8, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC5-7;NC1,2", + "CoilString": "HC5-7;NC1_2", + "PulseSequenceDetails": "%SiemensSeq%_tse_vfl", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "EchoTrainLength": 76, + "PhaseEncodingSteps": 422, + "AcquisitionMatrixPE": 320, + "ReconMatrixPE": 320, + "PixelBandwidth": 625, + "DwellTime": 2.5e-06, "ImageOrientationPatientDICOM": [ - -1.2e-13, - 1, - 4.895e-12, - 0.0244322, - 4.897e-12, + -1.2e-13, + 1, + 4.895e-12, + 0.0244322, + 4.897e-12, -0.999701 - ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181125 (JP2:OpenJPEG) (JP-LS:CharLS) Clang8.1.0", - "Dcm2bidsVersion": "2.1.4" + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181125 (JP2:OpenJPEG) (JP-LS:CharLS) Clang8.1.0", + "Dcm2bidsVersion": "2.1.4", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-cardiff02/anat/sub-cardiff02_flip-1_mt-on_space-other_MTS.json b/derivatives/data_preprocessed/sub-cardiff02/anat/sub-cardiff02_flip-1_mt-on_space-other_MTS.json index ae5b6fd91a..1e3bc9739f 100644 --- a/derivatives/data_preprocessed/sub-cardiff02/anat/sub-cardiff02_flip-1_mt-on_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-cardiff02/anat/sub-cardiff02_flip-1_mt-on_space-other_MTS.json @@ -1,74 +1,77 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.253, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma", - "InstitutionName": "CUBRIC", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "Maindy_Road_CARDIFF_Wales_GB_CF24_4HQ", - "DeviceSerialNumber": "66073", - "StationName": "AWP66073", - "BodyPartExamined": "CSPINE", - "PatientPosition": "HFS", - "ProcedureStepDescription": "3TWproj_324_SpinalCord", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-MT1", - "ProtocolName": "GRE-MT1", - "ScanningSequence": "GR", - "SequenceVariant": "MTC_SP", - "ScanOptions": "MT", - "SequenceName": "_fl3d1", + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 123.253, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma", + "InstitutionName": "CUBRIC", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "Maindy_Road_CARDIFF_Wales_GB_CF24_4HQ", + "DeviceSerialNumber": "66073", + "StationName": "AWP66073", + "BodyPartExamined": "CSPINE", + "PatientPosition": "HFS", + "ProcedureStepDescription": "3TWproj_324_SpinalCord", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-MT1", + "ProtocolName": "GRE-MT1", + "ScanningSequence": "GR", + "SequenceVariant": "MTC_SP", + "ScanOptions": "MT", + "SequenceName": "_fl3d1", "ImageType": [ - "ORIGINAL", - "PRIMARY", - "M", + "ORIGINAL", + "PRIMARY", + "M", "DIS2D" - ], - "SeriesNumber": 3, - "AcquisitionTime": "10:55:16.980000", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SAR": 0.504946, - "EchoTime": 0.00313, - "RepetitionTime": 0.035, - "FlipAngle": 9, - "PartialFourier": 1, - "BaseResolution": 256, + ], + "SeriesNumber": 3, + "AcquisitionTime": "10:55:16.980000", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SAR": 0.504946, + "EchoTime": 0.00313, + "RepetitionTime": 0.035, + "FlipAngle": 9, + "PartialFourier": 1, + "BaseResolution": 256, "ShimSetting": [ - 9768, - -102, - -2866, - -1191, - -89, - 1794, - 5, + 9768, + -102, + -2866, + -1191, + -89, + 1794, + 5, 21 - ], - "TxRefAmp": 251.28, - "PhaseResolution": 1, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC5-7;NC1,2", - "CoilString": "HC5-7;NC1_2", - "PulseSequenceDetails": "%SiemensSeq%_gre", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 100, - "PhaseEncodingSteps": 255, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 256, - "PixelBandwidth": 260, - "DwellTime": 7.5e-06, + ], + "TxRefAmp": 251.28, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC5-7;NC1,2", + "CoilString": "HC5-7;NC1_2", + "PulseSequenceDetails": "%SiemensSeq%_gre", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 255, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "PixelBandwidth": 260, + "DwellTime": 7.5e-06, "ImageOrientationPatientDICOM": [ - 1, - 0, - 0, - 0, - 0.995884, + 1, + 0, + 0, + 0, + 0.995884, 0.0906326 - ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181125 (JP2:OpenJPEG) (JP-LS:CharLS) Clang8.1.0", - "Dcm2bidsVersion": "2.1.4" + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181125 (JP2:OpenJPEG) (JP-LS:CharLS) Clang8.1.0", + "Dcm2bidsVersion": "2.1.4", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-cardiff02/anat/sub-cardiff02_flip-2_mt-off_space-other_MTS.json b/derivatives/data_preprocessed/sub-cardiff02/anat/sub-cardiff02_flip-2_mt-off_space-other_MTS.json index 334c9f1586..6131fd88fe 100644 --- a/derivatives/data_preprocessed/sub-cardiff02/anat/sub-cardiff02_flip-2_mt-off_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-cardiff02/anat/sub-cardiff02_flip-2_mt-off_space-other_MTS.json @@ -1,73 +1,76 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.253, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma", - "InstitutionName": "CUBRIC", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "Maindy_Road_CARDIFF_Wales_GB_CF24_4HQ", - "DeviceSerialNumber": "66073", - "StationName": "AWP66073", - "BodyPartExamined": "CSPINE", - "PatientPosition": "HFS", - "ProcedureStepDescription": "3TWproj_324_SpinalCord", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-T1w", - "ProtocolName": "GRE-T1w", - "ScanningSequence": "GR", - "SequenceVariant": "SP", - "SequenceName": "_fl3d1", + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 123.253, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma", + "InstitutionName": "CUBRIC", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "Maindy_Road_CARDIFF_Wales_GB_CF24_4HQ", + "DeviceSerialNumber": "66073", + "StationName": "AWP66073", + "BodyPartExamined": "CSPINE", + "PatientPosition": "HFS", + "ProcedureStepDescription": "3TWproj_324_SpinalCord", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-T1w", + "ProtocolName": "GRE-T1w", + "ScanningSequence": "GR", + "SequenceVariant": "SP", + "SequenceName": "_fl3d1", "ImageType": [ - "ORIGINAL", - "PRIMARY", - "M", + "ORIGINAL", + "PRIMARY", + "M", "DIS2D" - ], - "SeriesNumber": 5, - "AcquisitionTime": "10:59:42.965000", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SAR": 0.0327391, - "EchoTime": 0.00313, - "RepetitionTime": 0.015, - "FlipAngle": 15, - "PartialFourier": 1, - "BaseResolution": 256, + ], + "SeriesNumber": 5, + "AcquisitionTime": "10:59:42.965000", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SAR": 0.0327391, + "EchoTime": 0.00313, + "RepetitionTime": 0.015, + "FlipAngle": 15, + "PartialFourier": 1, + "BaseResolution": 256, "ShimSetting": [ - 9768, - -102, - -2866, - -1191, - -89, - 1794, - 5, + 9768, + -102, + -2866, + -1191, + -89, + 1794, + 5, 21 - ], - "TxRefAmp": 251.28, - "PhaseResolution": 1, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC5-7;NC1,2", - "CoilString": "HC5-7;NC1_2", - "PulseSequenceDetails": "%SiemensSeq%_gre", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 100, - "PhaseEncodingSteps": 255, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 256, - "PixelBandwidth": 260, - "DwellTime": 7.5e-06, + ], + "TxRefAmp": 251.28, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC5-7;NC1,2", + "CoilString": "HC5-7;NC1_2", + "PulseSequenceDetails": "%SiemensSeq%_gre", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 255, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "PixelBandwidth": 260, + "DwellTime": 7.5e-06, "ImageOrientationPatientDICOM": [ - 1, - 0, - 0, - 0, - 0.995884, + 1, + 0, + 0, + 0, + 0.995884, 0.0906326 - ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181125 (JP2:OpenJPEG) (JP-LS:CharLS) Clang8.1.0", - "Dcm2bidsVersion": "2.1.4" + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181125 (JP2:OpenJPEG) (JP-LS:CharLS) Clang8.1.0", + "Dcm2bidsVersion": "2.1.4", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-cardiff02/anat/sub-cardiff02_space-other_T1w.json b/derivatives/data_preprocessed/sub-cardiff02/anat/sub-cardiff02_space-other_T1w.json index 6593d39cd9..7bf619f718 100644 --- a/derivatives/data_preprocessed/sub-cardiff02/anat/sub-cardiff02_space-other_T1w.json +++ b/derivatives/data_preprocessed/sub-cardiff02/anat/sub-cardiff02_space-other_T1w.json @@ -1,77 +1,81 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.253, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma", - "InstitutionName": "CUBRIC", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "Maindy_Road_CARDIFF_Wales_GB_CF24_4HQ", - "DeviceSerialNumber": "66073", - "StationName": "AWP66073", - "BodyPartExamined": "CSPINE", - "PatientPosition": "HFS", - "ProcedureStepDescription": "3TWproj_324_SpinalCord", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "T1w", - "ProtocolName": "T1w", - "ScanningSequence": "GR_IR", - "SequenceVariant": "SK_SP_MP", - "ScanOptions": "IR", - "SequenceName": "_tfl3d1_16", + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 123.253, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma", + "InstitutionName": "CUBRIC", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "Maindy_Road_CARDIFF_Wales_GB_CF24_4HQ", + "DeviceSerialNumber": "66073", + "StationName": "AWP66073", + "BodyPartExamined": "CSPINE", + "PatientPosition": "HFS", + "ProcedureStepDescription": "3TWproj_324_SpinalCord", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "T1w", + "ProtocolName": "T1w", + "ScanningSequence": "GR_IR", + "SequenceVariant": "SK_SP_MP", + "ScanOptions": "IR", + "SequenceName": "_tfl3d1_16", "ImageType": [ - "ORIGINAL", - "PRIMARY", - "M", - "NORM", - "DIS3D", + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS3D", "DIS2D" - ], - "SeriesNumber": 7, - "AcquisitionTime": "11:05:56.030000", - "AcquisitionNumber": 1, - "SliceThickness": 1, - "SAR": 0.0577156, - "EchoTime": 0.00372, - "RepetitionTime": 2, - "InversionTime": 1, - "FlipAngle": 9, - "PartialFourier": 1, - "BaseResolution": 320, + ], + "SeriesNumber": 7, + "AcquisitionTime": "11:05:56.030000", + "AcquisitionNumber": 1, + "SliceThickness": 1, + "SAR": 0.0577156, + "EchoTime": 0.00372, + "RepetitionTime": 2, + "InversionTime": 1, + "FlipAngle": 9, + "PartialFourier": 1, + "BaseResolution": 320, "ShimSetting": [ - 9807, - 59, - -2898, - 41, - 24, - -25, - -19, + 9807, + 59, + -2898, + 41, + 24, + -25, + -19, 28 - ], - "TxRefAmp": 234.621, - "PhaseResolution": 1, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC1-7;NC1,2", - "CoilString": "HC1-7;NC1_2", - "PulseSequenceDetails": "%SiemensSeq%_tfl", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 81.25, - "PhaseEncodingSteps": 259, - "AcquisitionMatrixPE": 260, - "ReconMatrixPE": 320, - "PixelBandwidth": 150, - "DwellTime": 1.04e-05, + ], + "TxRefAmp": 234.621, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC1-7;NC1,2", + "CoilString": "HC1-7;NC1_2", + "PulseSequenceDetails": "%SiemensSeq%_tfl", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 81.25, + "PhaseEncodingSteps": 259, + "AcquisitionMatrixPE": 260, + "ReconMatrixPE": 320, + "PixelBandwidth": 150, + "DwellTime": 1.04e-05, "ImageOrientationPatientDICOM": [ - 0, - 1, - 0, - 0.0471064, - 0, + 0, + 1, + 0, + 0.0471064, + 0, -0.99889 - ], - "InPlanePhaseEncodingDirectionDICOM": "ROW", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181125 (JP2:OpenJPEG) (JP-LS:CharLS) Clang8.1.0", - "Dcm2bidsVersion": "2.1.4" + ], + "InPlanePhaseEncodingDirectionDICOM": "ROW", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181125 (JP2:OpenJPEG) (JP-LS:CharLS) Clang8.1.0", + "Dcm2bidsVersion": "2.1.4", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-cardiff02/anat/sub-cardiff02_space-other_T2star.json b/derivatives/data_preprocessed/sub-cardiff02/anat/sub-cardiff02_space-other_T2star.json index 0fe7a8c1e7..80d7b7556b 100644 --- a/derivatives/data_preprocessed/sub-cardiff02/anat/sub-cardiff02_space-other_T2star.json +++ b/derivatives/data_preprocessed/sub-cardiff02/anat/sub-cardiff02_space-other_T2star.json @@ -76,5 +76,9 @@ "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20181125 (JP2:OpenJPEG) (JP-LS:CharLS) Clang8.1.0", "Dcm2bidsVersion": "2.1.4", - "AcquisitionDuration": 285.0 + "AcquisitionDuration": 285.0, + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-cardiff02/anat/sub-cardiff02_space-other_T2w.json b/derivatives/data_preprocessed/sub-cardiff02/anat/sub-cardiff02_space-other_T2w.json index a82a4ffb99..6656a3034b 100644 --- a/derivatives/data_preprocessed/sub-cardiff02/anat/sub-cardiff02_space-other_T2w.json +++ b/derivatives/data_preprocessed/sub-cardiff02/anat/sub-cardiff02_space-other_T2w.json @@ -1,78 +1,82 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.253, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma", - "InstitutionName": "CUBRIC", - "InstitutionalDepartmentName": 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e52da68fbd..8a6df3fd68 100644 --- a/derivatives/data_preprocessed/sub-cardiff03/anat/sub-cardiff03_flip-2_mt-off_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-cardiff03/anat/sub-cardiff03_flip-2_mt-off_space-other_MTS.json @@ -1,73 +1,76 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.253, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma", - "InstitutionName": "CUBRIC", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "Maindy_Road_CARDIFF_Wales_GB_CF24_4HQ", - "DeviceSerialNumber": "66073", - "StationName": "AWP66073", - "BodyPartExamined": "CSPINE", - "PatientPosition": "HFS", - "ProcedureStepDescription": "3TWproj_324_SpinalCord", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-T1w", - "ProtocolName": "GRE-T1w", - "ScanningSequence": "GR", - "SequenceVariant": "SP", - "SequenceName": "_fl3d1", + "Modality": "MR", + "MagneticFieldStrength": 3, + 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b/derivatives/data_preprocessed/sub-cardiff03/anat/sub-cardiff03_space-other_T1w.json index 04af7df576..f80091342f 100644 --- a/derivatives/data_preprocessed/sub-cardiff03/anat/sub-cardiff03_space-other_T1w.json +++ b/derivatives/data_preprocessed/sub-cardiff03/anat/sub-cardiff03_space-other_T1w.json @@ -1,77 +1,81 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.253, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma", - "InstitutionName": "CUBRIC", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "Maindy_Road_CARDIFF_Wales_GB_CF24_4HQ", - "DeviceSerialNumber": "66073", - "StationName": "AWP66073", - "BodyPartExamined": "CSPINE", - "PatientPosition": "HFS", - "ProcedureStepDescription": "3TWproj_324_SpinalCord", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "T1w", - "ProtocolName": "T1w", - "ScanningSequence": "GR_IR", - "SequenceVariant": "SK_SP_MP", - "ScanOptions": "IR", 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} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-cardiff03/anat/sub-cardiff03_space-other_T2star.json b/derivatives/data_preprocessed/sub-cardiff03/anat/sub-cardiff03_space-other_T2star.json index 96c1dfd36e..47fe6f0fc1 100644 --- a/derivatives/data_preprocessed/sub-cardiff03/anat/sub-cardiff03_space-other_T2star.json +++ b/derivatives/data_preprocessed/sub-cardiff03/anat/sub-cardiff03_space-other_T2star.json @@ -76,5 +76,9 @@ "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20181125 (JP2:OpenJPEG) (JP-LS:CharLS) Clang8.1.0", "Dcm2bidsVersion": "2.1.4", - "AcquisitionDuration": 285.0 + "AcquisitionDuration": 285.0, + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-cardiff03/anat/sub-cardiff03_space-other_T2w.json 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"Maindy_Road_CARDIFF_Wales_GB_CF24_4HQ", + "DeviceSerialNumber": "66073", + "StationName": "AWP66073", + "BodyPartExamined": "SPINE", + "PatientPosition": "HFS", + "ProcedureStepDescription": "3TWproj_324_SpinalCord", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-MT1", + "ProtocolName": "GRE-MT1", + "ScanningSequence": "GR", + "SequenceVariant": "MTC_SP", + "ScanOptions": "MT", + "SequenceName": "_fl3d1", "ImageType": [ - "ORIGINAL", - "PRIMARY", - "M", + "ORIGINAL", + "PRIMARY", + "M", "DIS2D" - ], - "SeriesNumber": 5, - "AcquisitionTime": "13:05:14.972500", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SAR": 0.498019, - "EchoTime": 0.00313, - "RepetitionTime": 0.035, - "FlipAngle": 9, - "PartialFourier": 1, - "BaseResolution": 256, + ], + "SeriesNumber": 5, + "AcquisitionTime": "13:05:14.972500", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SAR": 0.498019, + "EchoTime": 0.00313, + "RepetitionTime": 0.035, + "FlipAngle": 9, 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b/derivatives/data_preprocessed/sub-cardiff05/anat/sub-cardiff05_flip-2_mt-off_space-other_MTS.json @@ -1,73 +1,76 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.253, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma", - "InstitutionName": "CUBRIC", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "Maindy_Road_CARDIFF_Wales_GB_CF24_4HQ", - "DeviceSerialNumber": "66073", - "StationName": "AWP66073", - "BodyPartExamined": "SPINE", - "PatientPosition": "HFS", - "ProcedureStepDescription": "3TWproj_324_SpinalCord", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-T1w", - "ProtocolName": "GRE-T1w", - "ScanningSequence": "GR", - "SequenceVariant": "SP", - "SequenceName": "_fl3d1", + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 123.253, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma", + "InstitutionName": "CUBRIC", + 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b/derivatives/data_preprocessed/sub-cardiff05/anat/sub-cardiff05_space-other_T1w.json @@ -1,77 +1,81 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.253, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma", - "InstitutionName": "CUBRIC", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "Maindy_Road_CARDIFF_Wales_GB_CF24_4HQ", - "DeviceSerialNumber": "66073", - "StationName": "AWP66073", - "BodyPartExamined": "SPINE", - "PatientPosition": "HFS", - "ProcedureStepDescription": "3TWproj_324_SpinalCord", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "T1w", - "ProtocolName": "T1w", - "ScanningSequence": "GR_IR", - "SequenceVariant": "SK_SP_MP", - "ScanOptions": "IR", - "SequenceName": "_tfl3d1_16", + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 123.253, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma", + "InstitutionName": "CUBRIC", + 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--- a/derivatives/data_preprocessed/sub-cardiff05/anat/sub-cardiff05_space-other_T2star.json +++ b/derivatives/data_preprocessed/sub-cardiff05/anat/sub-cardiff05_space-other_T2star.json @@ -76,5 +76,9 @@ "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20181125 (JP2:OpenJPEG) (JP-LS:CharLS) Clang8.1.0", "Dcm2bidsVersion": "2.1.4", - "AcquisitionDuration": 285.0 + "AcquisitionDuration": 285.0, + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-cardiff05/anat/sub-cardiff05_space-other_T2w.json b/derivatives/data_preprocessed/sub-cardiff05/anat/sub-cardiff05_space-other_T2w.json index 5a47da233b..68928ee084 100644 --- a/derivatives/data_preprocessed/sub-cardiff05/anat/sub-cardiff05_space-other_T2w.json +++ b/derivatives/data_preprocessed/sub-cardiff05/anat/sub-cardiff05_space-other_T2w.json @@ -1,78 +1,82 @@ { - "Modality": 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b/derivatives/data_preprocessed/sub-cardiff06/anat/sub-cardiff06_flip-1_mt-on_space-other_MTS.json index 3ca7b85701..95032f807d 100644 --- a/derivatives/data_preprocessed/sub-cardiff06/anat/sub-cardiff06_flip-1_mt-on_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-cardiff06/anat/sub-cardiff06_flip-1_mt-on_space-other_MTS.json @@ -1,74 +1,77 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.253, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma", - "InstitutionName": "CUBRIC", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "Maindy_Road_CARDIFF_Wales_GB_CF24_4HQ", - "DeviceSerialNumber": "66073", - "StationName": "AWP66073", - "BodyPartExamined": "CSPINE", - "PatientPosition": "HFS", - "ProcedureStepDescription": "3TWproj_324_SpinalCord", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-MT1", - "ProtocolName": "GRE-MT1", - "ScanningSequence": "GR", - "SequenceVariant": "MTC_SP", - "ScanOptions": "MT", - "SequenceName": "_fl3d1", + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 123.253, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma", + "InstitutionName": "CUBRIC", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "Maindy_Road_CARDIFF_Wales_GB_CF24_4HQ", + "DeviceSerialNumber": "66073", + "StationName": "AWP66073", + "BodyPartExamined": "CSPINE", + "PatientPosition": "HFS", + "ProcedureStepDescription": "3TWproj_324_SpinalCord", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-MT1", + "ProtocolName": "GRE-MT1", + "ScanningSequence": "GR", + "SequenceVariant": "MTC_SP", + "ScanOptions": "MT", + "SequenceName": "_fl3d1", "ImageType": [ - "ORIGINAL", - "PRIMARY", - "M", + "ORIGINAL", + "PRIMARY", + "M", "DIS2D" - ], - "SeriesNumber": 5, - "AcquisitionTime": "10:36:15.967500", - "AcquisitionNumber": 1, - "SliceThickness": 5, - 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a/derivatives/data_preprocessed/sub-cardiff06/anat/sub-cardiff06_flip-2_mt-off_space-other_MTS.json b/derivatives/data_preprocessed/sub-cardiff06/anat/sub-cardiff06_flip-2_mt-off_space-other_MTS.json index 09a437744a..d6f2ba2039 100644 --- a/derivatives/data_preprocessed/sub-cardiff06/anat/sub-cardiff06_flip-2_mt-off_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-cardiff06/anat/sub-cardiff06_flip-2_mt-off_space-other_MTS.json @@ -1,73 +1,76 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.253, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma", - "InstitutionName": "CUBRIC", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "Maindy_Road_CARDIFF_Wales_GB_CF24_4HQ", - "DeviceSerialNumber": "66073", - "StationName": "AWP66073", - "BodyPartExamined": "CSPINE", - "PatientPosition": "HFS", - "ProcedureStepDescription": "3TWproj_324_SpinalCord", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", 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diff --git a/derivatives/data_preprocessed/sub-cardiff06/anat/sub-cardiff06_space-other_T1w.json b/derivatives/data_preprocessed/sub-cardiff06/anat/sub-cardiff06_space-other_T1w.json index 65ac3f4e74..5cae1db156 100644 --- a/derivatives/data_preprocessed/sub-cardiff06/anat/sub-cardiff06_space-other_T1w.json +++ b/derivatives/data_preprocessed/sub-cardiff06/anat/sub-cardiff06_space-other_T1w.json @@ -1,77 +1,81 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.253, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma", - "InstitutionName": "CUBRIC", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "Maindy_Road_CARDIFF_Wales_GB_CF24_4HQ", - "DeviceSerialNumber": "66073", - "StationName": "AWP66073", - "BodyPartExamined": "CSPINE", - "PatientPosition": "HFS", - "ProcedureStepDescription": "3TWproj_324_SpinalCord", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "T1w", - "ProtocolName": "T1w", - "ScanningSequence": "GR_IR", - "SequenceVariant": "SK_SP_MP", - "ScanOptions": "IR", - "SequenceName": "_tfl3d1_16", + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 123.253, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma", + "InstitutionName": "CUBRIC", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "Maindy_Road_CARDIFF_Wales_GB_CF24_4HQ", + "DeviceSerialNumber": "66073", + "StationName": "AWP66073", + "BodyPartExamined": "CSPINE", + "PatientPosition": "HFS", + "ProcedureStepDescription": "3TWproj_324_SpinalCord", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "T1w", + "ProtocolName": "T1w", + "ScanningSequence": "GR_IR", + "SequenceVariant": "SK_SP_MP", + "ScanOptions": "IR", + "SequenceName": "_tfl3d1_16", "ImageType": [ - "ORIGINAL", - "PRIMARY", - "M", - "NORM", - "DIS3D", + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS3D", "DIS2D" - ], - 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"SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-cardiff06/anat/sub-cardiff06_space-other_T2star.json b/derivatives/data_preprocessed/sub-cardiff06/anat/sub-cardiff06_space-other_T2star.json index 20cf0339d5..b22197e20c 100644 --- a/derivatives/data_preprocessed/sub-cardiff06/anat/sub-cardiff06_space-other_T2star.json +++ b/derivatives/data_preprocessed/sub-cardiff06/anat/sub-cardiff06_space-other_T2star.json @@ -76,5 +76,9 @@ "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20181125 (JP2:OpenJPEG) (JP-LS:CharLS) Clang8.1.0", "Dcm2bidsVersion": "2.1.4", - "AcquisitionDuration": 285.0 + "AcquisitionDuration": 285.0, + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-cardiff06/anat/sub-cardiff06_space-other_T2w.json b/derivatives/data_preprocessed/sub-cardiff06/anat/sub-cardiff06_space-other_T2w.json index de61446066..a84a6829ad 100644 --- a/derivatives/data_preprocessed/sub-cardiff06/anat/sub-cardiff06_space-other_T2w.json +++ b/derivatives/data_preprocessed/sub-cardiff06/anat/sub-cardiff06_space-other_T2w.json @@ -1,78 +1,82 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.253, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma", - "InstitutionName": "CUBRIC", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "Maindy_Road_CARDIFF_Wales_GB_CF24_4HQ", - "DeviceSerialNumber": "66073", - "StationName": "AWP66073", - "BodyPartExamined": "CSPINE", - "PatientPosition": "HFS", - "ProcedureStepDescription": "3TWproj_324_SpinalCord", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "T2w", - "ProtocolName": "T2w", - "ScanningSequence": "SE", - "SequenceVariant": "SK_SP_OSP", - "ScanOptions": "PFP", - 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b/derivatives/data_preprocessed/sub-cmrra02/anat/sub-cmrra02_flip-2_mt-off_space-other_MTS.json index 05de3f538e..fa0d015feb 100644 --- a/derivatives/data_preprocessed/sub-cmrra02/anat/sub-cmrra02_flip-2_mt-off_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-cmrra02/anat/sub-cmrra02_flip-2_mt-off_space-other_MTS.json @@ -1,74 +1,77 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.234, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma_fit", - "InstitutionName": "CMRR_3T-A", - "InstitutionalDepartmentName": "Research", - "InstitutionAddress": "6th_SE_2021_Minneapolis_Minnesota_US_55455", - "DeviceSerialNumber": "67055", - "StationName": "TRIO", - "BodyPartExamined": "CSPINE", - "PatientPosition": "HFS", - "ProcedureStepDescription": "Rene_MontrealSpine", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-T1w", - "ProtocolName": "GRE-T1w", - "ScanningSequence": "GR", - 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\ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-cmrra02/anat/sub-cmrra02_space-other_T1w.json b/derivatives/data_preprocessed/sub-cmrra02/anat/sub-cmrra02_space-other_T1w.json index 6eeb62086f..b217d92601 100644 --- a/derivatives/data_preprocessed/sub-cmrra02/anat/sub-cmrra02_space-other_T1w.json +++ b/derivatives/data_preprocessed/sub-cmrra02/anat/sub-cmrra02_space-other_T1w.json @@ -1,78 +1,82 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.235, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma_fit", - "InstitutionName": "CMRR_3T-A", - "InstitutionalDepartmentName": "Research", - "InstitutionAddress": "6th_SE_2021_Minneapolis_Minnesota_US_55455", - "DeviceSerialNumber": "67055", - "StationName": "TRIO", - "BodyPartExamined": "CSPINE", - "PatientPosition": "HFS", - "ProcedureStepDescription": "Rene_MontrealSpine", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "T1w", - 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b/derivatives/data_preprocessed/sub-cmrra03/anat/sub-cmrra03_space-other_T2star.json index 9d5819ee99..d8d9c8ef47 100644 --- a/derivatives/data_preprocessed/sub-cmrra03/anat/sub-cmrra03_space-other_T2star.json +++ b/derivatives/data_preprocessed/sub-cmrra03/anat/sub-cmrra03_space-other_T2star.json @@ -78,5 +78,9 @@ "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20190410 (JP2:OpenJPEG) (JP-LS:CharLS) Clang8.1.0", "Dcm2bidsVersion": "2.1.4", - "AcquisitionDuration": 285.0 + "AcquisitionDuration": 285.0, + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-cmrra03/anat/sub-cmrra03_space-other_T2w.json b/derivatives/data_preprocessed/sub-cmrra03/anat/sub-cmrra03_space-other_T2w.json index 7f86989060..8a84b33415 100644 --- a/derivatives/data_preprocessed/sub-cmrra03/anat/sub-cmrra03_space-other_T2w.json +++ 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newline at end of file diff --git a/derivatives/data_preprocessed/sub-cmrra04/anat/sub-cmrra04_flip-1_mt-on_space-other_MTS.json b/derivatives/data_preprocessed/sub-cmrra04/anat/sub-cmrra04_flip-1_mt-on_space-other_MTS.json index 6aaf40b28a..dea39f01c7 100644 --- a/derivatives/data_preprocessed/sub-cmrra04/anat/sub-cmrra04_flip-1_mt-on_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-cmrra04/anat/sub-cmrra04_flip-1_mt-on_space-other_MTS.json @@ -1,75 +1,78 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.234, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma_fit", - "InstitutionName": "CMRR_3T-A", - "InstitutionalDepartmentName": "Research", - "InstitutionAddress": "6th_SE_2021_Minneapolis_Minnesota_US_55455", - "DeviceSerialNumber": "67055", - "StationName": "TRIO", - "BodyPartExamined": "CSPINE", - "PatientPosition": "HFS", - "ProcedureStepDescription": "Rene_MontrealSpine", - "SoftwareVersions": "syngo_MR_E11", - 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a/derivatives/data_preprocessed/sub-cmrra05/anat/sub-cmrra05_flip-1_mt-on_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-cmrra05/anat/sub-cmrra05_flip-1_mt-on_space-other_MTS.json @@ -1,75 +1,78 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.235, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma_fit", - "InstitutionName": "CMRR_3T-A", - "InstitutionalDepartmentName": "Research", - "InstitutionAddress": "6th_SE_2021_Minneapolis_Minnesota_US_55455", - "DeviceSerialNumber": "67055", - "StationName": "TRIO", - "BodyPartExamined": "CSPINE", - "PatientPosition": "HFS", - "ProcedureStepDescription": "Rene_MontrealSpine", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-MT1", - "ProtocolName": "GRE-MT1", - "ScanningSequence": "GR", - "SequenceVariant": "MTC_SP", - "ScanOptions": "MT", - "SequenceName": "_fl3d1", + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 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a/derivatives/data_preprocessed/sub-cmrra05/anat/sub-cmrra05_flip-2_mt-off_space-other_MTS.json b/derivatives/data_preprocessed/sub-cmrra05/anat/sub-cmrra05_flip-2_mt-off_space-other_MTS.json index 3b52dca660..b1f1db0f86 100644 --- a/derivatives/data_preprocessed/sub-cmrra05/anat/sub-cmrra05_flip-2_mt-off_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-cmrra05/anat/sub-cmrra05_flip-2_mt-off_space-other_MTS.json @@ -1,74 +1,77 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.235, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma_fit", - "InstitutionName": "CMRR_3T-A", - "InstitutionalDepartmentName": "Research", - "InstitutionAddress": "6th_SE_2021_Minneapolis_Minnesota_US_55455", - "DeviceSerialNumber": "67055", - "StationName": "TRIO", - "BodyPartExamined": "CSPINE", - "PatientPosition": "HFS", - "ProcedureStepDescription": "Rene_MontrealSpine", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - 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Clang8.1.0", + "Dcm2bidsVersion": "2.1.4", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-cmrra05/anat/sub-cmrra05_space-other_T1w.json b/derivatives/data_preprocessed/sub-cmrra05/anat/sub-cmrra05_space-other_T1w.json index 9360b7f943..7b462ad802 100644 --- a/derivatives/data_preprocessed/sub-cmrra05/anat/sub-cmrra05_space-other_T1w.json +++ b/derivatives/data_preprocessed/sub-cmrra05/anat/sub-cmrra05_space-other_T1w.json @@ -1,78 +1,82 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.235, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma_fit", - "InstitutionName": "CMRR_3T-A", - "InstitutionalDepartmentName": "Research", - "InstitutionAddress": "6th_SE_2021_Minneapolis_Minnesota_US_55455", - "DeviceSerialNumber": "67055", - "StationName": "TRIO", - "BodyPartExamined": "CSPINE", - "PatientPosition": "HFS", - "ProcedureStepDescription": "Rene_MontrealSpine", 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"root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-cmrra05/anat/sub-cmrra05_space-other_T2w.json b/derivatives/data_preprocessed/sub-cmrra05/anat/sub-cmrra05_space-other_T2w.json index 049dde243a..bce9675576 100644 --- a/derivatives/data_preprocessed/sub-cmrra05/anat/sub-cmrra05_space-other_T2w.json +++ b/derivatives/data_preprocessed/sub-cmrra05/anat/sub-cmrra05_space-other_T2w.json @@ -1,80 +1,84 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.235, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma_fit", - "InstitutionName": "CMRR_3T-A", - "InstitutionalDepartmentName": "Research", - "InstitutionAddress": "6th_SE_2021_Minneapolis_Minnesota_US_55455", - "DeviceSerialNumber": "67055", - "StationName": "TRIO", - "BodyPartExamined": "CSPINE", - "PatientPosition": "HFS", - "ProcedureStepDescription": "Rene_MontrealSpine", - "SoftwareVersions": "syngo_MR_E11", 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f1f2216599..09ad92b1a5 100644 --- a/derivatives/data_preprocessed/sub-cmrra06/anat/sub-cmrra06_space-other_T1w.json +++ b/derivatives/data_preprocessed/sub-cmrra06/anat/sub-cmrra06_space-other_T1w.json @@ -1,78 +1,82 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.235, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma_fit", - "InstitutionName": "CMRR_3T-A", - "InstitutionalDepartmentName": "Research", - "InstitutionAddress": "6th_SE_2021_Minneapolis_Minnesota_US_55455", - "DeviceSerialNumber": "67055", - "StationName": "TRIO", - "BodyPartExamined": "CSPINE", - "PatientPosition": "HFS", - "ProcedureStepDescription": "Rene_MontrealSpine", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "T1w", - "ProtocolName": "T1w", - "ScanningSequence": "GR_IR", - "SequenceVariant": "SK_SP_MP", - "ScanOptions": "IR", - "SequenceName": "_tfl3d1_16", + "Modality": "MR", + "MagneticFieldStrength": 3, + 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a/derivatives/data_preprocessed/sub-cmrra06/anat/sub-cmrra06_space-other_T2w.json +++ b/derivatives/data_preprocessed/sub-cmrra06/anat/sub-cmrra06_space-other_T2w.json @@ -1,80 +1,84 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.235, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma_fit", - "InstitutionName": "CMRR_3T-A", - "InstitutionalDepartmentName": "Research", - "InstitutionAddress": "6th_SE_2021_Minneapolis_Minnesota_US_55455", - "DeviceSerialNumber": "67055", - "StationName": "TRIO", - "BodyPartExamined": "CSPINE", - "PatientPosition": "HFS", - "ProcedureStepDescription": "Rene_MontrealSpine", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "T2w", - "ProtocolName": "T2w", - "ScanningSequence": "SE", - "SequenceVariant": "SK_SP_OSP", - "ScanOptions": "PFP", - "SequenceName": "_spcR_100", + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 123.235, + "Manufacturer": 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b/derivatives/data_preprocessed/sub-cmrrb01/anat/sub-cmrrb01_space-other_T2star.json @@ -77,5 +77,9 @@ "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20190410 (JP2:OpenJPEG) (JP-LS:CharLS) Clang8.1.0", "Dcm2bidsVersion": "2.1.4", - "AcquisitionDuration": 285.0 + "AcquisitionDuration": 285.0, + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-cmrrb01/anat/sub-cmrrb01_space-other_T2w.json b/derivatives/data_preprocessed/sub-cmrrb01/anat/sub-cmrrb01_space-other_T2w.json index 4b310d11ff..8221e8c340 100644 --- a/derivatives/data_preprocessed/sub-cmrrb01/anat/sub-cmrrb01_space-other_T2w.json +++ b/derivatives/data_preprocessed/sub-cmrrb01/anat/sub-cmrrb01_space-other_T2w.json @@ -1,80 +1,84 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.173, - "Manufacturer": "Siemens", - 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b/derivatives/data_preprocessed/sub-cmrrb02/anat/sub-cmrrb02_flip-1_mt-on_space-other_MTS.json index daa1063879..03b49bb5b2 100644 --- a/derivatives/data_preprocessed/sub-cmrrb02/anat/sub-cmrrb02_flip-1_mt-on_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-cmrrb02/anat/sub-cmrrb02_flip-1_mt-on_space-other_MTS.json @@ -1,75 +1,78 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.172, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma_fit", - "InstitutionName": "CMRR_3T-B", - "InstitutionalDepartmentName": "Research", - "InstitutionAddress": "6th_SE_2021_Minneapolis_Minneapolis_US_55455", - "DeviceSerialNumber": "67010", - "StationName": "TRIOB", - "BodyPartExamined": "CSPINE", - "PatientPosition": "HFS", - "ProcedureStepDescription": "Joers_MontrealSpine", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-MT1", - "ProtocolName": "GRE-MT1", - "ScanningSequence": "GR", - 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at end of file diff --git a/derivatives/data_preprocessed/sub-cmrrb02/anat/sub-cmrrb02_flip-2_mt-off_space-other_MTS.json b/derivatives/data_preprocessed/sub-cmrrb02/anat/sub-cmrrb02_flip-2_mt-off_space-other_MTS.json index bde823b686..73b9a412a6 100644 --- a/derivatives/data_preprocessed/sub-cmrrb02/anat/sub-cmrrb02_flip-2_mt-off_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-cmrrb02/anat/sub-cmrrb02_flip-2_mt-off_space-other_MTS.json @@ -1,74 +1,77 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.172, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma_fit", - "InstitutionName": "CMRR_3T-B", - "InstitutionalDepartmentName": "Research", - "InstitutionAddress": "6th_SE_2021_Minneapolis_Minneapolis_US_55455", - "DeviceSerialNumber": "67010", - "StationName": "TRIOB", - "BodyPartExamined": "CSPINE", - "PatientPosition": "HFS", - "ProcedureStepDescription": "Joers_MontrealSpine", - "SoftwareVersions": "syngo_MR_E11", - 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"2.1.4", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-cmrrb02/anat/sub-cmrrb02_space-other_T1w.json b/derivatives/data_preprocessed/sub-cmrrb02/anat/sub-cmrrb02_space-other_T1w.json index 492a30a2db..dfe0a9dc57 100644 --- a/derivatives/data_preprocessed/sub-cmrrb02/anat/sub-cmrrb02_space-other_T1w.json +++ b/derivatives/data_preprocessed/sub-cmrrb02/anat/sub-cmrrb02_space-other_T1w.json @@ -1,78 +1,82 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.173, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma_fit", - "InstitutionName": "CMRR_3T-B", - "InstitutionalDepartmentName": "Research", - "InstitutionAddress": "6th_SE_2021_Minneapolis_Minneapolis_US_55455", - "DeviceSerialNumber": "67010", - "StationName": "TRIOB", - "BodyPartExamined": "CSPINE", - "PatientPosition": "HFS", - "ProcedureStepDescription": "Joers_MontrealSpine", - "SoftwareVersions": 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(if it exists)" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-cmrrb02/anat/sub-cmrrb02_space-other_T2w.json b/derivatives/data_preprocessed/sub-cmrrb02/anat/sub-cmrrb02_space-other_T2w.json index b2ba6cc5c0..062544f0ab 100644 --- a/derivatives/data_preprocessed/sub-cmrrb02/anat/sub-cmrrb02_space-other_T2w.json +++ b/derivatives/data_preprocessed/sub-cmrrb02/anat/sub-cmrrb02_space-other_T2w.json @@ -1,80 +1,84 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.173, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma_fit", - "InstitutionName": "CMRR_3T-B", - "InstitutionalDepartmentName": "Research", - "InstitutionAddress": "6th_SE_2021_Minneapolis_Minneapolis_US_55455", - "DeviceSerialNumber": "67010", - "StationName": "TRIOB", - "BodyPartExamined": "CSPINE", - "PatientPosition": "HFS", - "ProcedureStepDescription": "Joers_MontrealSpine", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - 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1171cc0474..8d5725148c 100644 --- a/derivatives/data_preprocessed/sub-cmrrb03/anat/sub-cmrrb03_space-other_T1w.json +++ b/derivatives/data_preprocessed/sub-cmrrb03/anat/sub-cmrrb03_space-other_T1w.json @@ -1,78 +1,82 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.174, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma_fit", - "InstitutionName": "CMRR_3T-B", - "InstitutionalDepartmentName": "Research", - "InstitutionAddress": "6th_SE_2021_Minneapolis_Minneapolis_US_55455", - "DeviceSerialNumber": "67010", - "StationName": "TRIOB", - "BodyPartExamined": "CSPINE", - "PatientPosition": "HFS", - "ProcedureStepDescription": "Joers_FRAMES", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "T1w", - "ProtocolName": "T1w", - "ScanningSequence": "GR_IR", - "SequenceVariant": "SK_SP_MP", - "ScanOptions": "IR", - "SequenceName": "_tfl3d1_16", + "Modality": "MR", + "MagneticFieldStrength": 3, + 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a/derivatives/data_preprocessed/sub-cmrrb03/anat/sub-cmrrb03_space-other_T2w.json +++ b/derivatives/data_preprocessed/sub-cmrrb03/anat/sub-cmrrb03_space-other_T2w.json @@ -1,80 +1,84 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.173, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma_fit", - "InstitutionName": "CMRR_3T-B", - "InstitutionalDepartmentName": "Research", - "InstitutionAddress": "6th_SE_2021_Minneapolis_Minneapolis_US_55455", - "DeviceSerialNumber": "67010", - "StationName": "TRIOB", - "BodyPartExamined": "CSPINE", - "PatientPosition": "HFS", - "ProcedureStepDescription": "Joers_FRAMES", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "T2w", - "ProtocolName": "T2w", - "ScanningSequence": "SE", - "SequenceVariant": "SK_SP_OSP", - "ScanOptions": "PFP", - "SequenceName": "_spcR_100", + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 123.173, + "Manufacturer": 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b/derivatives/data_preprocessed/sub-cmrrb05/anat/sub-cmrrb05_flip-2_mt-off_space-other_MTS.json index 30543d0987..a5c46affe0 100644 --- a/derivatives/data_preprocessed/sub-cmrrb05/anat/sub-cmrrb05_flip-2_mt-off_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-cmrrb05/anat/sub-cmrrb05_flip-2_mt-off_space-other_MTS.json @@ -1,74 +1,77 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.173, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma_fit", - "InstitutionName": "CMRR_3T-B", - "InstitutionalDepartmentName": "Research", - "InstitutionAddress": "6th_SE_2021_Minneapolis_Minneapolis_US_55455", - "DeviceSerialNumber": "67010", - "StationName": "TRIOB", - "BodyPartExamined": "CSPINE", - "PatientPosition": "HFS", - "ProcedureStepDescription": "Joers_MontrealSpine", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-T1w", - "ProtocolName": "GRE-T1w", - "ScanningSequence": "GR", - 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a/derivatives/data_preprocessed/sub-cmrrb05/anat/sub-cmrrb05_space-other_T1w.json b/derivatives/data_preprocessed/sub-cmrrb05/anat/sub-cmrrb05_space-other_T1w.json index f51922fcd8..53b7518ec3 100644 --- a/derivatives/data_preprocessed/sub-cmrrb05/anat/sub-cmrrb05_space-other_T1w.json +++ b/derivatives/data_preprocessed/sub-cmrrb05/anat/sub-cmrrb05_space-other_T1w.json @@ -1,78 +1,82 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.174, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma_fit", - "InstitutionName": "CMRR_3T-B", - "InstitutionalDepartmentName": "Research", - "InstitutionAddress": "6th_SE_2021_Minneapolis_Minneapolis_US_55455", - "DeviceSerialNumber": "67010", - "StationName": "TRIOB", - "BodyPartExamined": "CSPINE", - "PatientPosition": "HFS", - "ProcedureStepDescription": "Joers_MontrealSpine", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "T1w", - "ProtocolName": "T1w", - 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a/derivatives/data_preprocessed/sub-cmrrb05/anat/sub-cmrrb05_space-other_T2w.json b/derivatives/data_preprocessed/sub-cmrrb05/anat/sub-cmrrb05_space-other_T2w.json index e07d607e63..83f16389cf 100644 --- a/derivatives/data_preprocessed/sub-cmrrb05/anat/sub-cmrrb05_space-other_T2w.json +++ b/derivatives/data_preprocessed/sub-cmrrb05/anat/sub-cmrrb05_space-other_T2w.json @@ -1,80 +1,84 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.173, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma_fit", - "InstitutionName": "CMRR_3T-B", - "InstitutionalDepartmentName": "Research", - "InstitutionAddress": "6th_SE_2021_Minneapolis_Minneapolis_US_55455", - "DeviceSerialNumber": "67010", - "StationName": "TRIOB", - "BodyPartExamined": "CSPINE", - "PatientPosition": "HFS", - "ProcedureStepDescription": "Joers_MontrealSpine", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "T2w", - "ProtocolName": "T2w", - 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a/derivatives/data_preprocessed/sub-cmrrb06/anat/sub-cmrrb06_space-other_T1w.json +++ b/derivatives/data_preprocessed/sub-cmrrb06/anat/sub-cmrrb06_space-other_T1w.json @@ -1,78 +1,82 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.173, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma_fit", - "InstitutionName": "CMRR_3T-B", - "InstitutionalDepartmentName": "Research", - "InstitutionAddress": "6th_SE_2021_Minneapolis_Minneapolis_US_55455", - "DeviceSerialNumber": "67010", - "StationName": "TRIOB", - "BodyPartExamined": "CSPINE", - "PatientPosition": "HFS", - "ProcedureStepDescription": "Joers_MontrealSpine", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "T1w", - "ProtocolName": "T1w", - "ScanningSequence": "GR_IR", - "SequenceVariant": "SK_SP_MP", - "ScanOptions": "IR", - "SequenceName": "_tfl3d1_16", + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 123.173, + 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a/derivatives/data_preprocessed/sub-cmrrb06/anat/sub-cmrrb06_space-other_T2w.json +++ b/derivatives/data_preprocessed/sub-cmrrb06/anat/sub-cmrrb06_space-other_T2w.json @@ -1,80 +1,84 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.173, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma_fit", - "InstitutionName": "CMRR_3T-B", - "InstitutionalDepartmentName": "Research", - "InstitutionAddress": "6th_SE_2021_Minneapolis_Minneapolis_US_55455", - "DeviceSerialNumber": "67010", - "StationName": "TRIOB", - "BodyPartExamined": "CSPINE", - "PatientPosition": "HFS", - "ProcedureStepDescription": "Joers_MontrealSpine", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "T2w", - "ProtocolName": "T2w", - "ScanningSequence": "SE", - "SequenceVariant": "SK_SP_OSP", - "ScanOptions": "PFP", - "SequenceName": "_spcR_100", + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 123.173, + "Manufacturer": 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b/derivatives/data_preprocessed/sub-cmrrb07/anat/sub-cmrrb07_space-other_T2star.json @@ -77,5 +77,9 @@ "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20190410 (JP2:OpenJPEG) (JP-LS:CharLS) Clang8.1.0", "Dcm2bidsVersion": "2.1.4", - "AcquisitionDuration": 285.0 + "AcquisitionDuration": 285.0, + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-cmrrb07/anat/sub-cmrrb07_space-other_T2w.json b/derivatives/data_preprocessed/sub-cmrrb07/anat/sub-cmrrb07_space-other_T2w.json index 09f059545e..c1d2986558 100644 --- a/derivatives/data_preprocessed/sub-cmrrb07/anat/sub-cmrrb07_space-other_T2w.json +++ b/derivatives/data_preprocessed/sub-cmrrb07/anat/sub-cmrrb07_space-other_T2w.json @@ -1,80 +1,84 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.173, - "Manufacturer": "Siemens", - 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b/derivatives/data_preprocessed/sub-dresden01/anat/sub-dresden01_flip-1_mt-on_space-other_MTS.json index 1147006f94..a00035a51d 100644 --- a/derivatives/data_preprocessed/sub-dresden01/anat/sub-dresden01_flip-1_mt-on_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-dresden01/anat/sub-dresden01_flip-1_mt-on_space-other_MTS.json @@ -1,75 +1,78 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.253, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma", - "InstitutionName": "Institut_fur_Neuroradiologie", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "Fetscherstrasse_74_Dresden_District_DE_01307", - "DeviceSerialNumber": "166061", - "StationName": "AWP166061", - "BodyPartExamined": "CSPINE", - "PatientPosition": "HFS", - "ProcedureStepDescription": "Neurorad_intern_GM-WM_spinal", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-MT1", - "ProtocolName": "GRE-MT1", - 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Clang8.1.0", + "Dcm2bidsVersion": "2.1.4", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-dresden01/anat/sub-dresden01_flip-2_mt-off_space-other_MTS.json b/derivatives/data_preprocessed/sub-dresden01/anat/sub-dresden01_flip-2_mt-off_space-other_MTS.json index 18bc998946..6c998fe82d 100644 --- a/derivatives/data_preprocessed/sub-dresden01/anat/sub-dresden01_flip-2_mt-off_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-dresden01/anat/sub-dresden01_flip-2_mt-off_space-other_MTS.json @@ -1,74 +1,77 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.253, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma", - "InstitutionName": "Institut_fur_Neuroradiologie", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "Fetscherstrasse_74_Dresden_District_DE_01307", - "DeviceSerialNumber": "166061", - "StationName": "AWP166061", - 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b/derivatives/data_preprocessed/sub-dresden01/anat/sub-dresden01_space-other_T2star.json @@ -77,5 +77,9 @@ "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20190410 (JP2:OpenJPEG) (JP-LS:CharLS) Clang8.1.0", "Dcm2bidsVersion": "2.1.4", - "AcquisitionDuration": 285.0 + "AcquisitionDuration": 285.0, + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-dresden01/anat/sub-dresden01_space-other_T2w.json b/derivatives/data_preprocessed/sub-dresden01/anat/sub-dresden01_space-other_T2w.json index aa80544692..877c732304 100644 --- a/derivatives/data_preprocessed/sub-dresden01/anat/sub-dresden01_space-other_T2w.json +++ b/derivatives/data_preprocessed/sub-dresden01/anat/sub-dresden01_space-other_T2w.json @@ -1,81 +1,85 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.253, - "Manufacturer": "Siemens", - 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b/derivatives/data_preprocessed/sub-dresden02/anat/sub-dresden02_flip-1_mt-on_space-other_MTS.json index 87fd045222..88292b754c 100644 --- a/derivatives/data_preprocessed/sub-dresden02/anat/sub-dresden02_flip-1_mt-on_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-dresden02/anat/sub-dresden02_flip-1_mt-on_space-other_MTS.json @@ -1,75 +1,78 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.253, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma", - "InstitutionName": "Institut_fur_Neuroradiologie", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "Fetscherstrasse_74_Dresden_District_DE_01307", - "DeviceSerialNumber": "166061", - "StationName": "AWP166061", - "BodyPartExamined": "CSPINE", - "PatientPosition": "HFS", - "ProcedureStepDescription": "Neurorad_intern_GM-WM_spinal", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-MT1", - "ProtocolName": "GRE-MT1", - "ScanningSequence": "GR", - "SequenceVariant": "MTC_SP", - "ScanOptions": "MT", - "SequenceName": "_fl3d1", + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 123.253, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma", + "InstitutionName": "Institut_fur_Neuroradiologie", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "Fetscherstrasse_74_Dresden_District_DE_01307", + "DeviceSerialNumber": "166061", + "StationName": "AWP166061", + "BodyPartExamined": "CSPINE", + "PatientPosition": "HFS", + "ProcedureStepDescription": "Neurorad_intern_GM-WM_spinal", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-MT1", + "ProtocolName": "GRE-MT1", + "ScanningSequence": "GR", + "SequenceVariant": "MTC_SP", + "ScanOptions": "MT", + "SequenceName": "_fl3d1", "ImageType": [ - "ORIGINAL", - "PRIMARY", - "M", + "ORIGINAL", + "PRIMARY", + "M", "DIS2D" - ], - "SeriesNumber": 9, - "AcquisitionTime": 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"SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-dresden02/anat/sub-dresden02_flip-2_mt-off_space-other_MTS.json b/derivatives/data_preprocessed/sub-dresden02/anat/sub-dresden02_flip-2_mt-off_space-other_MTS.json index f9cc496c8c..9999ff6c4d 100644 --- a/derivatives/data_preprocessed/sub-dresden02/anat/sub-dresden02_flip-2_mt-off_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-dresden02/anat/sub-dresden02_flip-2_mt-off_space-other_MTS.json @@ -1,74 +1,77 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.253, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma", - "InstitutionName": "Institut_fur_Neuroradiologie", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "Fetscherstrasse_74_Dresden_District_DE_01307", - "DeviceSerialNumber": "166061", - "StationName": "AWP166061", - "BodyPartExamined": "CSPINE", - "PatientPosition": "HFS", 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b/derivatives/data_preprocessed/sub-fslAchieva01/anat/sub-fslAchieva01_flip-1_mt-on_space-other_MTS.json index ae1f8a6ebe..0568b0dfc6 100644 --- a/derivatives/data_preprocessed/sub-fslAchieva01/anat/sub-fslAchieva01_flip-1_mt-on_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-fslAchieva01/anat/sub-fslAchieva01_flip-1_mt-on_space-other_MTS.json @@ -1,62 +1,65 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 127.754, - "Manufacturer": "Philips", - "ManufacturersModelName": "Achieva", - "InstitutionName": "Fondazione_S.Lucia", - "InstitutionalDepartmentName": "Diagnostica_per_Immagine", - "DeviceSerialNumber": "34249", - "StationName": "PHILIPS-29CDACE", - "BodyPartExamined": "SPINE", - "PatientPosition": "HFS", - "ProcedureStepDescription": "FRATINI", - "SoftwareVersions": "5.4.1_5.4.1.1", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-MT", - "ProtocolName": "GRE-MT", - "ScanningSequence": "GR", - "SequenceVariant": "SP", - 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a/derivatives/data_preprocessed/sub-fslAchieva01/anat/sub-fslAchieva01_flip-2_mt-off_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-fslAchieva01/anat/sub-fslAchieva01_flip-2_mt-off_space-other_MTS.json @@ -1,62 +1,65 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 127.754, - "Manufacturer": "Philips", - "ManufacturersModelName": "Achieva", - "InstitutionName": "Fondazione_S.Lucia", - "InstitutionalDepartmentName": "Diagnostica_per_Immagine", - "DeviceSerialNumber": "34249", - "StationName": "PHILIPS-29CDACE", - "BodyPartExamined": "SPINE", - "PatientPosition": "HFS", - "ProcedureStepDescription": "FRATINI", - "SoftwareVersions": "5.4.1_5.4.1.1", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-T1", - "ProtocolName": "GRE-T1", - "ScanningSequence": "GR", - "SequenceVariant": "SP", - "ScanOptions": "PFF", + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 127.754, + "Manufacturer": "Philips", + 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"root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-fslAchieva01/anat/sub-fslAchieva01_space-other_T2w.json b/derivatives/data_preprocessed/sub-fslAchieva01/anat/sub-fslAchieva01_space-other_T2w.json index e1ff247d07..cd5aaac4fb 100644 --- a/derivatives/data_preprocessed/sub-fslAchieva01/anat/sub-fslAchieva01_space-other_T2w.json +++ b/derivatives/data_preprocessed/sub-fslAchieva01/anat/sub-fslAchieva01_space-other_T2w.json @@ -1,63 +1,67 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 127.754, - "Manufacturer": "Philips", - "ManufacturersModelName": "Achieva", - "InstitutionName": "Fondazione_S.Lucia", - "InstitutionalDepartmentName": "Diagnostica_per_Immagine", - "DeviceSerialNumber": "34249", - "StationName": "PHILIPS-29CDACE", - "BodyPartExamined": "SPINE", - "PatientPosition": "HFS", - "ProcedureStepDescription": "FRATINI", - "SoftwareVersions": "5.4.1_5.4.1.1", - 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b/derivatives/data_preprocessed/sub-fslAchieva02/anat/sub-fslAchieva02_flip-1_mt-on_space-other_MTS.json index 9f2aa23c32..e75236ed9f 100644 --- a/derivatives/data_preprocessed/sub-fslAchieva02/anat/sub-fslAchieva02_flip-1_mt-on_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-fslAchieva02/anat/sub-fslAchieva02_flip-1_mt-on_space-other_MTS.json @@ -1,62 +1,65 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 127.753, - "Manufacturer": "Philips", - "ManufacturersModelName": "Achieva", - "InstitutionName": "Fondazione_S.Lucia", - "InstitutionalDepartmentName": "Diagnostica_per_Immagine", - "DeviceSerialNumber": "34249", - "StationName": "PHILIPS-29CDACE", - "BodyPartExamined": "SPINE", - "PatientPosition": "HFS", - "ProcedureStepDescription": "FRATINI", - "SoftwareVersions": "5.4.1_5.4.1.1", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-MT", - "ProtocolName": "GRE-MT", - "ScanningSequence": "GR", - "SequenceVariant": "SP", - 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a/derivatives/data_preprocessed/sub-fslAchieva02/anat/sub-fslAchieva02_flip-2_mt-off_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-fslAchieva02/anat/sub-fslAchieva02_flip-2_mt-off_space-other_MTS.json @@ -1,62 +1,65 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 127.753, - "Manufacturer": "Philips", - "ManufacturersModelName": "Achieva", - "InstitutionName": "Fondazione_S.Lucia", - "InstitutionalDepartmentName": "Diagnostica_per_Immagine", - "DeviceSerialNumber": "34249", - "StationName": "PHILIPS-29CDACE", - "BodyPartExamined": "SPINE", - "PatientPosition": "HFS", - "ProcedureStepDescription": "FRATINI", - "SoftwareVersions": "5.4.1_5.4.1.1", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-T1", - "ProtocolName": "GRE-T1", - "ScanningSequence": "GR", - "SequenceVariant": "SP", - "ScanOptions": "PFF", + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 127.753, + "Manufacturer": "Philips", + 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"root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-fslAchieva02/anat/sub-fslAchieva02_space-other_T2w.json b/derivatives/data_preprocessed/sub-fslAchieva02/anat/sub-fslAchieva02_space-other_T2w.json index 543e7793f9..74008ec3d3 100644 --- a/derivatives/data_preprocessed/sub-fslAchieva02/anat/sub-fslAchieva02_space-other_T2w.json +++ b/derivatives/data_preprocessed/sub-fslAchieva02/anat/sub-fslAchieva02_space-other_T2w.json @@ -1,63 +1,67 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 127.753, - "Manufacturer": "Philips", - "ManufacturersModelName": "Achieva", - "InstitutionName": "Fondazione_S.Lucia", - "InstitutionalDepartmentName": "Diagnostica_per_Immagine", - "DeviceSerialNumber": "34249", - "StationName": "PHILIPS-29CDACE", - "BodyPartExamined": "SPINE", - "PatientPosition": "HFS", - "ProcedureStepDescription": "FRATINI", - "SoftwareVersions": "5.4.1_5.4.1.1", - 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b/derivatives/data_preprocessed/sub-fslAchieva03/anat/sub-fslAchieva03_flip-1_mt-on_space-other_MTS.json index 9cdc3916b8..483a21ca56 100644 --- a/derivatives/data_preprocessed/sub-fslAchieva03/anat/sub-fslAchieva03_flip-1_mt-on_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-fslAchieva03/anat/sub-fslAchieva03_flip-1_mt-on_space-other_MTS.json @@ -1,62 +1,65 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 127.753, - "Manufacturer": "Philips", - "ManufacturersModelName": "Achieva", - "InstitutionName": "Fondazione_S.Lucia", - "InstitutionalDepartmentName": "Diagnostica_per_Immagine", - "DeviceSerialNumber": "34249", - "StationName": "PHILIPS-29CDACE", - "BodyPartExamined": "SPINE", - "PatientPosition": "HFS", - "ProcedureStepDescription": "FRATINI", - "SoftwareVersions": "5.4.1_5.4.1.1", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-MT", - "ProtocolName": "GRE-MT", - "ScanningSequence": "GR", - "SequenceVariant": "SP", - "ScanOptions": "PFF", + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 127.753, + "Manufacturer": "Philips", + "ManufacturersModelName": "Achieva", + "InstitutionName": "Fondazione_S.Lucia", + "InstitutionalDepartmentName": "Diagnostica_per_Immagine", + "DeviceSerialNumber": "34249", + "StationName": "PHILIPS-29CDACE", + "BodyPartExamined": "SPINE", + "PatientPosition": "HFS", + "ProcedureStepDescription": "FRATINI", + "SoftwareVersions": "5.4.1_5.4.1.1", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-MT", + "ProtocolName": "GRE-MT", + "ScanningSequence": "GR", + "SequenceVariant": "SP", + "ScanOptions": "PFF", "ImageType": [ - "ORIGINAL", - "PRIMARY", - "M", - "FFE", - "M", + "ORIGINAL", + "PRIMARY", + "M", + "FFE", + "M", "FFE" - ], - "SeriesNumber": 601, - "AcquisitionTime": "14:45:52.280000", - "AcquisitionNumber": 6, - "PhilipsRWVSlope": 1.70794, - "PhilipsRWVIntercept": 0, - "PhilipsRescaleSlope": 1.70794, - "PhilipsRescaleIntercept": 0, - 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[ - 0.999693, - -0.00324781, - 0.0245674, - -4.33681e-19, - 0.991374, + 0.999693, + -0.00324781, + 0.0245674, + -4.33681e-19, + 0.991374, 0.13106 - ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20190410 (JP2:OpenJPEG) (JP-LS:CharLS) Clang8.1.0", - "Dcm2bidsVersion": "2.1.4" + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20190410 (JP2:OpenJPEG) (JP-LS:CharLS) Clang8.1.0", + "Dcm2bidsVersion": "2.1.4", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-fslAchieva03/anat/sub-fslAchieva03_flip-2_mt-off_space-other_MTS.json b/derivatives/data_preprocessed/sub-fslAchieva03/anat/sub-fslAchieva03_flip-2_mt-off_space-other_MTS.json index fd13cca8bc..e69d5c78c8 100644 --- a/derivatives/data_preprocessed/sub-fslAchieva03/anat/sub-fslAchieva03_flip-2_mt-off_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-fslAchieva03/anat/sub-fslAchieva03_flip-2_mt-off_space-other_MTS.json @@ -1,62 +1,65 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 127.753, - "Manufacturer": "Philips", - "ManufacturersModelName": "Achieva", - "InstitutionName": "Fondazione_S.Lucia", - "InstitutionalDepartmentName": "Diagnostica_per_Immagine", - "DeviceSerialNumber": "34249", - "StationName": "PHILIPS-29CDACE", - "BodyPartExamined": "SPINE", - "PatientPosition": "HFS", - "ProcedureStepDescription": "FRATINI", - "SoftwareVersions": "5.4.1_5.4.1.1", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-T1", - "ProtocolName": "GRE-T1", - "ScanningSequence": "GR", - "SequenceVariant": "SP", - "ScanOptions": "PFF", + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 127.753, + "Manufacturer": "Philips", + "ManufacturersModelName": "Achieva", + "InstitutionName": "Fondazione_S.Lucia", + "InstitutionalDepartmentName": "Diagnostica_per_Immagine", + "DeviceSerialNumber": "34249", + "StationName": "PHILIPS-29CDACE", + "BodyPartExamined": "SPINE", + "PatientPosition": "HFS", + "ProcedureStepDescription": "FRATINI", + "SoftwareVersions": "5.4.1_5.4.1.1", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-T1", + "ProtocolName": "GRE-T1", + "ScanningSequence": "GR", + "SequenceVariant": "SP", + "ScanOptions": "PFF", "ImageType": [ - "ORIGINAL", - "PRIMARY", - "M", - "FFE", - "M", + "ORIGINAL", + "PRIMARY", + "M", + "FFE", + "M", "FFE" - ], - "SeriesNumber": 701, - "AcquisitionTime": "14:53:50.930000", - "AcquisitionNumber": 7, - "PhilipsRWVSlope": 1.57875, - "PhilipsRWVIntercept": 0, - "PhilipsRescaleSlope": 1.57875, - "PhilipsRescaleIntercept": 0, - "PhilipsScaleSlope": 4.12166e-05, - "UsePhilipsFloatNotDisplayScaling": 1, - "SliceThickness": 5, - "SpacingBetweenSlices": 5, - "SAR": 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-4.33681e-19, + 0.991374, 0.13106 - ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20190410 (JP2:OpenJPEG) (JP-LS:CharLS) Clang8.1.0", - "Dcm2bidsVersion": "2.1.4" + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20190410 (JP2:OpenJPEG) (JP-LS:CharLS) Clang8.1.0", + "Dcm2bidsVersion": "2.1.4", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-fslAchieva03/anat/sub-fslAchieva03_space-other_T1w.json b/derivatives/data_preprocessed/sub-fslAchieva03/anat/sub-fslAchieva03_space-other_T1w.json index b51feb353a..36cd0abc26 100644 --- a/derivatives/data_preprocessed/sub-fslAchieva03/anat/sub-fslAchieva03_space-other_T1w.json +++ b/derivatives/data_preprocessed/sub-fslAchieva03/anat/sub-fslAchieva03_space-other_T1w.json @@ -1,63 +1,67 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 127.753, - "Manufacturer": "Philips", - "ManufacturersModelName": "Achieva", - "InstitutionName": "Fondazione_S.Lucia", - "InstitutionalDepartmentName": "Diagnostica_per_Immagine", - "DeviceSerialNumber": "34249", - "StationName": "PHILIPS-29CDACE", - "BodyPartExamined": "SPINE", - "PatientPosition": "HFS", - "ProcedureStepDescription": "FRATINI", - "SoftwareVersions": "5.4.1_5.4.1.1", - "MRAcquisitionType": "3D", - "SeriesDescription": "T1w", - "ProtocolName": "T1w", - "ScanningSequence": "GR", - "SequenceVariant": "MP", - "ScanOptions": "OTHER", + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 127.753, + "Manufacturer": "Philips", + "ManufacturersModelName": "Achieva", + "InstitutionName": "Fondazione_S.Lucia", + "InstitutionalDepartmentName": "Diagnostica_per_Immagine", + "DeviceSerialNumber": "34249", + "StationName": "PHILIPS-29CDACE", + "BodyPartExamined": "SPINE", + "PatientPosition": "HFS", + "ProcedureStepDescription": "FRATINI", + "SoftwareVersions": "5.4.1_5.4.1.1", + "MRAcquisitionType": "3D", + "SeriesDescription": "T1w", + "ProtocolName": "T1w", + "ScanningSequence": "GR", + "SequenceVariant": "MP", + "ScanOptions": "OTHER", "ImageType": [ - "ORIGINAL", - "PRIMARY", - "M", - "FFE", - "M", + "ORIGINAL", + "PRIMARY", + "M", + "FFE", + "M", "FFE" - ], - "SeriesNumber": 201, - "AcquisitionTime": "14:20:11.670000", - "AcquisitionNumber": 2, - "PhilipsRWVSlope": 3.32918, - "PhilipsRWVIntercept": 0, - "PhilipsRescaleSlope": 3.32918, - "PhilipsRescaleIntercept": 0, - "PhilipsScaleSlope": 0.000334107, - "UsePhilipsFloatNotDisplayScaling": 1, - "SliceThickness": 1, - "SpacingBetweenSlices": 1, - "SAR": 0.0332933, - "EchoTime": 0.003556, - "RepetitionTime": 0.0076656, - "FlipAngle": 9, - "CoilString": "MULTI_COIL", - "PercentPhaseFOV": 81.25, - "EchoTrainLength": 246, - "PhaseEncodingSteps": 320, - "AcquisitionMatrixPE": 320, - "ReconMatrixPE": 320, - "PixelBandwidth": 191, + ], + "SeriesNumber": 201, + "AcquisitionTime": "14:20:11.670000", + "AcquisitionNumber": 2, + "PhilipsRWVSlope": 3.32918, + "PhilipsRWVIntercept": 0, + "PhilipsRescaleSlope": 3.32918, + "PhilipsRescaleIntercept": 0, + "PhilipsScaleSlope": 0.000334107, + "UsePhilipsFloatNotDisplayScaling": 1, + "SliceThickness": 1, + "SpacingBetweenSlices": 1, + "SAR": 0.0332933, + "EchoTime": 0.003556, + "RepetitionTime": 0.0076656, + "FlipAngle": 9, + "CoilString": "MULTI_COIL", + "PercentPhaseFOV": 81.25, + "EchoTrainLength": 246, + "PhaseEncodingSteps": 320, + "AcquisitionMatrixPE": 320, + "ReconMatrixPE": 320, + "PixelBandwidth": 191, "ImageOrientationPatientDICOM": [ - 0, - 1, - 0, - 0.0247811, - 0, + 0, + 1, + 0, + 0.0247811, + 0, -0.999693 - ], - "InPlanePhaseEncodingDirectionDICOM": "ROW", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20190410 (JP2:OpenJPEG) (JP-LS:CharLS) Clang8.1.0", - "Dcm2bidsVersion": "2.1.4" + ], + "InPlanePhaseEncodingDirectionDICOM": "ROW", + 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"root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-fslAchieva03/anat/sub-fslAchieva03_space-other_T2w.json b/derivatives/data_preprocessed/sub-fslAchieva03/anat/sub-fslAchieva03_space-other_T2w.json index da00d82336..72e8496453 100644 --- a/derivatives/data_preprocessed/sub-fslAchieva03/anat/sub-fslAchieva03_space-other_T2w.json +++ b/derivatives/data_preprocessed/sub-fslAchieva03/anat/sub-fslAchieva03_space-other_T2w.json @@ -1,63 +1,67 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 127.753, - "Manufacturer": "Philips", - "ManufacturersModelName": "Achieva", - "InstitutionName": "Fondazione_S.Lucia", - "InstitutionalDepartmentName": "Diagnostica_per_Immagine", - "DeviceSerialNumber": "34249", - "StationName": "PHILIPS-29CDACE", - "BodyPartExamined": "SPINE", - "PatientPosition": "HFS", - "ProcedureStepDescription": "FRATINI", - "SoftwareVersions": "5.4.1_5.4.1.1", - 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b/derivatives/data_preprocessed/sub-fslAchieva04/anat/sub-fslAchieva04_flip-1_mt-on_space-other_MTS.json index e4b1cf7cc6..76c8cae426 100644 --- a/derivatives/data_preprocessed/sub-fslAchieva04/anat/sub-fslAchieva04_flip-1_mt-on_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-fslAchieva04/anat/sub-fslAchieva04_flip-1_mt-on_space-other_MTS.json @@ -1,62 +1,65 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 127.753, - "Manufacturer": "Philips", - "ManufacturersModelName": "Achieva", - "InstitutionName": "Fondazione_S.Lucia", - "InstitutionalDepartmentName": "Diagnostica_per_Immagine", - "DeviceSerialNumber": "34249", - "StationName": "PHILIPS-29CDACE", - "BodyPartExamined": "SPINE", - "PatientPosition": "HFS", - "ProcedureStepDescription": "FRATINI", - "SoftwareVersions": "5.4.1_5.4.1.1", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-MT", - "ProtocolName": "GRE-MT", - "ScanningSequence": "GR", - "SequenceVariant": "SP", - "ScanOptions": "PFF", + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 127.753, + "Manufacturer": "Philips", + "ManufacturersModelName": "Achieva", + "InstitutionName": "Fondazione_S.Lucia", + "InstitutionalDepartmentName": "Diagnostica_per_Immagine", + "DeviceSerialNumber": "34249", + "StationName": "PHILIPS-29CDACE", + "BodyPartExamined": "SPINE", + "PatientPosition": "HFS", + "ProcedureStepDescription": "FRATINI", + "SoftwareVersions": "5.4.1_5.4.1.1", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-MT", + "ProtocolName": "GRE-MT", + "ScanningSequence": "GR", + "SequenceVariant": "SP", + "ScanOptions": "PFF", "ImageType": [ - "ORIGINAL", - "PRIMARY", - "M", - "FFE", - "M", + "ORIGINAL", + "PRIMARY", + "M", + "FFE", + "M", "FFE" - ], - "SeriesNumber": 501, - "AcquisitionTime": "19:42:12.900000", - "AcquisitionNumber": 5, - "PhilipsRWVSlope": 1.66716, - "PhilipsRWVIntercept": 0, - "PhilipsRescaleSlope": 1.66716, - "PhilipsRescaleIntercept": 0, - 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a/derivatives/data_preprocessed/sub-fslAchieva04/anat/sub-fslAchieva04_flip-2_mt-off_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-fslAchieva04/anat/sub-fslAchieva04_flip-2_mt-off_space-other_MTS.json @@ -1,62 +1,65 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 127.753, - "Manufacturer": "Philips", - "ManufacturersModelName": "Achieva", - "InstitutionName": "Fondazione_S.Lucia", - "InstitutionalDepartmentName": "Diagnostica_per_Immagine", - "DeviceSerialNumber": "34249", - "StationName": "PHILIPS-29CDACE", - "BodyPartExamined": "SPINE", - "PatientPosition": "HFS", - "ProcedureStepDescription": "FRATINI", - "SoftwareVersions": "5.4.1_5.4.1.1", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-T1", - "ProtocolName": "GRE-T1", - "ScanningSequence": "GR", - "SequenceVariant": "SP", - "ScanOptions": "PFF", + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 127.753, + "Manufacturer": "Philips", + "ManufacturersModelName": "Achieva", + "InstitutionName": "Fondazione_S.Lucia", + "InstitutionalDepartmentName": "Diagnostica_per_Immagine", + "DeviceSerialNumber": "34249", + "StationName": "PHILIPS-29CDACE", + "BodyPartExamined": "SPINE", + "PatientPosition": "HFS", + "ProcedureStepDescription": "FRATINI", + "SoftwareVersions": "5.4.1_5.4.1.1", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-T1", + "ProtocolName": "GRE-T1", + "ScanningSequence": "GR", + "SequenceVariant": "SP", + "ScanOptions": "PFF", "ImageType": [ - "ORIGINAL", - "PRIMARY", - "M", - "FFE", - "M", + "ORIGINAL", + "PRIMARY", + "M", + "FFE", + "M", "FFE" - ], - "SeriesNumber": 601, - "AcquisitionTime": "19:50:10.490000", - "AcquisitionNumber": 6, - "PhilipsRWVSlope": 1.48669, - "PhilipsRWVIntercept": 0, - "PhilipsRescaleSlope": 1.48669, - "PhilipsRescaleIntercept": 0, - "PhilipsScaleSlope": 3.46195e-05, - "UsePhilipsFloatNotDisplayScaling": 1, - "SliceThickness": 5, - "SpacingBetweenSlices": 5, - "SAR": 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0.998934, -1.39348e-10 - ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20190410 (JP2:OpenJPEG) (JP-LS:CharLS) Clang8.1.0", - "Dcm2bidsVersion": "2.1.4" + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20190410 (JP2:OpenJPEG) (JP-LS:CharLS) Clang8.1.0", + "Dcm2bidsVersion": "2.1.4", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-fslAchieva04/anat/sub-fslAchieva04_space-other_T1w.json b/derivatives/data_preprocessed/sub-fslAchieva04/anat/sub-fslAchieva04_space-other_T1w.json index 7dab36c11c..c952218328 100644 --- a/derivatives/data_preprocessed/sub-fslAchieva04/anat/sub-fslAchieva04_space-other_T1w.json +++ b/derivatives/data_preprocessed/sub-fslAchieva04/anat/sub-fslAchieva04_space-other_T1w.json @@ -1,63 +1,67 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 127.753, - "Manufacturer": "Philips", - "ManufacturersModelName": "Achieva", - "InstitutionName": "Fondazione_S.Lucia", - "InstitutionalDepartmentName": "Diagnostica_per_Immagine", - "DeviceSerialNumber": "34249", - "StationName": "PHILIPS-29CDACE", - "BodyPartExamined": "SPINE", - "PatientPosition": "HFS", - "ProcedureStepDescription": "FRATINI", - "SoftwareVersions": "5.4.1_5.4.1.1", - "MRAcquisitionType": "3D", - "SeriesDescription": "T1w", - "ProtocolName": "T1w", - "ScanningSequence": "GR", - "SequenceVariant": "MP", - "ScanOptions": "OTHER", + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 127.753, + "Manufacturer": "Philips", + "ManufacturersModelName": "Achieva", + "InstitutionName": "Fondazione_S.Lucia", + "InstitutionalDepartmentName": "Diagnostica_per_Immagine", + "DeviceSerialNumber": "34249", + "StationName": "PHILIPS-29CDACE", + "BodyPartExamined": "SPINE", + "PatientPosition": "HFS", + "ProcedureStepDescription": "FRATINI", + "SoftwareVersions": "5.4.1_5.4.1.1", + "MRAcquisitionType": "3D", + "SeriesDescription": "T1w", + "ProtocolName": "T1w", + "ScanningSequence": "GR", + "SequenceVariant": "MP", + "ScanOptions": "OTHER", "ImageType": [ - "ORIGINAL", - "PRIMARY", - "M", - "FFE", - "M", + "ORIGINAL", + "PRIMARY", + "M", + "FFE", + "M", "FFE" - ], - "SeriesNumber": 201, - "AcquisitionTime": "19:22:55.830000", - "AcquisitionNumber": 2, - "PhilipsRWVSlope": 3.5558, - "PhilipsRWVIntercept": 0, - "PhilipsRescaleSlope": 3.5558, - "PhilipsRescaleIntercept": 0, - "PhilipsScaleSlope": 0.000356228, - "UsePhilipsFloatNotDisplayScaling": 1, - "SliceThickness": 1, - "SpacingBetweenSlices": 1, - "SAR": 0.417876, - "EchoTime": 0.003554, - "RepetitionTime": 0.0076353, - "FlipAngle": 9, - "CoilString": "MULTI_COIL", - "PercentPhaseFOV": 81.25, - "EchoTrainLength": 246, - "PhaseEncodingSteps": 320, - "AcquisitionMatrixPE": 320, - "ReconMatrixPE": 320, - "PixelBandwidth": 191, + ], + 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"ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20190410 (JP2:OpenJPEG) (JP-LS:CharLS) Clang8.1.0", + "Dcm2bidsVersion": "2.1.4", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-fslAchieva04/anat/sub-fslAchieva04_space-other_T2star.json b/derivatives/data_preprocessed/sub-fslAchieva04/anat/sub-fslAchieva04_space-other_T2star.json index e1347e2629..1fc8b61ab2 100644 --- a/derivatives/data_preprocessed/sub-fslAchieva04/anat/sub-fslAchieva04_space-other_T2star.json +++ b/derivatives/data_preprocessed/sub-fslAchieva04/anat/sub-fslAchieva04_space-other_T2star.json @@ -62,5 +62,9 @@ "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20190410 (JP2:OpenJPEG) (JP-LS:CharLS) Clang8.1.0", "Dcm2bidsVersion": "2.1.4", - "AcquisitionDuration": 242.5 + "AcquisitionDuration": 242.5, + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-fslAchieva04/anat/sub-fslAchieva04_space-other_T2w.json b/derivatives/data_preprocessed/sub-fslAchieva04/anat/sub-fslAchieva04_space-other_T2w.json index 23e3e96227..a63c6d0c35 100644 --- a/derivatives/data_preprocessed/sub-fslAchieva04/anat/sub-fslAchieva04_space-other_T2w.json +++ b/derivatives/data_preprocessed/sub-fslAchieva04/anat/sub-fslAchieva04_space-other_T2w.json @@ -1,63 +1,67 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 127.753, - "Manufacturer": "Philips", - "ManufacturersModelName": "Achieva", - "InstitutionName": "Fondazione_S.Lucia", - "InstitutionalDepartmentName": "Diagnostica_per_Immagine", - "DeviceSerialNumber": "34249", - "StationName": "PHILIPS-29CDACE", - "BodyPartExamined": "SPINE", - "PatientPosition": "HFS", - "ProcedureStepDescription": "FRATINI", - "SoftwareVersions": "5.4.1_5.4.1.1", - "MRAcquisitionType": "3D", - "SeriesDescription": "T2w", - "ProtocolName": "T2w", - "ScanningSequence": "SE", - "SequenceVariant": "SK", - "ScanOptions": "PFP", + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 127.753, + "Manufacturer": "Philips", + "ManufacturersModelName": "Achieva", + "InstitutionName": "Fondazione_S.Lucia", + "InstitutionalDepartmentName": "Diagnostica_per_Immagine", + "DeviceSerialNumber": "34249", + "StationName": "PHILIPS-29CDACE", + "BodyPartExamined": "SPINE", + "PatientPosition": "HFS", + "ProcedureStepDescription": "FRATINI", + "SoftwareVersions": "5.4.1_5.4.1.1", + "MRAcquisitionType": "3D", + "SeriesDescription": "T2w", + "ProtocolName": "T2w", + "ScanningSequence": "SE", + "SequenceVariant": "SK", + "ScanOptions": "PFP", "ImageType": [ - "ORIGINAL", - "PRIMARY", - "M", - "SE", - "M", + "ORIGINAL", + "PRIMARY", + "M", + "SE", + "M", "SE" - ], - "SeriesNumber": 301, - "AcquisitionTime": "19:27:35.610000", - "AcquisitionNumber": 3, - 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b/derivatives/data_preprocessed/sub-fslAchieva05/anat/sub-fslAchieva05_flip-1_mt-on_space-other_MTS.json index 1e3450867d..2bf0934812 100644 --- a/derivatives/data_preprocessed/sub-fslAchieva05/anat/sub-fslAchieva05_flip-1_mt-on_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-fslAchieva05/anat/sub-fslAchieva05_flip-1_mt-on_space-other_MTS.json @@ -1,62 +1,65 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 127.753, - "Manufacturer": "Philips", - "ManufacturersModelName": "Achieva", - "InstitutionName": "Fondazione_S.Lucia", - "InstitutionalDepartmentName": "Diagnostica_per_Immagine", - "DeviceSerialNumber": "34249", - "StationName": "PHILIPS-29CDACE", - "BodyPartExamined": "SPINE", - "PatientPosition": "HFS", - "ProcedureStepDescription": "FRATINI", - "SoftwareVersions": "5.4.1_5.4.1.1", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-MT", - "ProtocolName": "GRE-MT", - "ScanningSequence": "GR", - "SequenceVariant": "SP", - 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a/derivatives/data_preprocessed/sub-fslAchieva05/anat/sub-fslAchieva05_flip-2_mt-off_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-fslAchieva05/anat/sub-fslAchieva05_flip-2_mt-off_space-other_MTS.json @@ -1,62 +1,65 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 127.753, - "Manufacturer": "Philips", - "ManufacturersModelName": "Achieva", - "InstitutionName": "Fondazione_S.Lucia", - "InstitutionalDepartmentName": "Diagnostica_per_Immagine", - "DeviceSerialNumber": "34249", - "StationName": "PHILIPS-29CDACE", - "BodyPartExamined": "SPINE", - "PatientPosition": "HFS", - "ProcedureStepDescription": "FRATINI", - "SoftwareVersions": "5.4.1_5.4.1.1", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-T1", - "ProtocolName": "GRE-T1", - "ScanningSequence": "GR", - "SequenceVariant": "SP", - "ScanOptions": "PFF", + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 127.753, + "Manufacturer": "Philips", + 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+ 0.980665, 0.19135 - ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20190410 (JP2:OpenJPEG) (JP-LS:CharLS) Clang8.1.0", - "Dcm2bidsVersion": "2.1.4" + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20190410 (JP2:OpenJPEG) (JP-LS:CharLS) Clang8.1.0", + "Dcm2bidsVersion": "2.1.4", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-fslAchieva05/anat/sub-fslAchieva05_space-other_T1w.json b/derivatives/data_preprocessed/sub-fslAchieva05/anat/sub-fslAchieva05_space-other_T1w.json index 3102072f14..568dde49bb 100644 --- a/derivatives/data_preprocessed/sub-fslAchieva05/anat/sub-fslAchieva05_space-other_T1w.json +++ b/derivatives/data_preprocessed/sub-fslAchieva05/anat/sub-fslAchieva05_space-other_T1w.json @@ -1,63 +1,67 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 127.753, - "Manufacturer": "Philips", - "ManufacturersModelName": "Achieva", - "InstitutionName": "Fondazione_S.Lucia", - "InstitutionalDepartmentName": "Diagnostica_per_Immagine", - "DeviceSerialNumber": "34249", - "StationName": "PHILIPS-29CDACE", - "BodyPartExamined": "SPINE", - "PatientPosition": "HFS", - "ProcedureStepDescription": "FRATINI", - "SoftwareVersions": "5.4.1_5.4.1.1", - "MRAcquisitionType": "3D", - "SeriesDescription": "T1w", - "ProtocolName": "T1w", - "ScanningSequence": "GR", - "SequenceVariant": "MP", - "ScanOptions": "OTHER", + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 127.753, + "Manufacturer": "Philips", + "ManufacturersModelName": "Achieva", + "InstitutionName": "Fondazione_S.Lucia", + "InstitutionalDepartmentName": "Diagnostica_per_Immagine", + "DeviceSerialNumber": "34249", + "StationName": "PHILIPS-29CDACE", + "BodyPartExamined": "SPINE", + "PatientPosition": "HFS", + "ProcedureStepDescription": "FRATINI", + "SoftwareVersions": "5.4.1_5.4.1.1", + "MRAcquisitionType": "3D", + "SeriesDescription": "T1w", + "ProtocolName": "T1w", + "ScanningSequence": "GR", + "SequenceVariant": "MP", + "ScanOptions": "OTHER", "ImageType": [ - "ORIGINAL", - "PRIMARY", - "M", - "FFE", - "M", + "ORIGINAL", + "PRIMARY", + "M", + "FFE", + "M", "FFE" - ], - "SeriesNumber": 201, - "AcquisitionTime": "16:00:2.400000", - "AcquisitionNumber": 2, - "PhilipsRWVSlope": 3.21538, - "PhilipsRWVIntercept": 0, - "PhilipsRescaleSlope": 3.21538, - "PhilipsRescaleIntercept": 0, - "PhilipsScaleSlope": 0.000384508, - "UsePhilipsFloatNotDisplayScaling": 1, - "SliceThickness": 1, - "SpacingBetweenSlices": 1, - "SAR": 0.0332933, - "EchoTime": 0.003556, - "RepetitionTime": 0.007664, - "FlipAngle": 9, - "CoilString": "MULTI_COIL", - "PercentPhaseFOV": 81.25, - "EchoTrainLength": 246, - "PhaseEncodingSteps": 320, - "AcquisitionMatrixPE": 320, - "ReconMatrixPE": 320, - "PixelBandwidth": 191, + ], + 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"AcquisitionDuration": 242.5, + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-fslAchieva05/anat/sub-fslAchieva05_space-other_T2w.json b/derivatives/data_preprocessed/sub-fslAchieva05/anat/sub-fslAchieva05_space-other_T2w.json index 5599787f31..2af5ead426 100644 --- a/derivatives/data_preprocessed/sub-fslAchieva05/anat/sub-fslAchieva05_space-other_T2w.json +++ b/derivatives/data_preprocessed/sub-fslAchieva05/anat/sub-fslAchieva05_space-other_T2w.json @@ -1,63 +1,67 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 127.753, - "Manufacturer": "Philips", - "ManufacturersModelName": "Achieva", - "InstitutionName": "Fondazione_S.Lucia", - "InstitutionalDepartmentName": "Diagnostica_per_Immagine", - "DeviceSerialNumber": "34249", - "StationName": "PHILIPS-29CDACE", - "BodyPartExamined": "SPINE", - "PatientPosition": 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a/derivatives/data_preprocessed/sub-fslAchieva06/anat/sub-fslAchieva06_flip-1_mt-on_space-other_MTS.json b/derivatives/data_preprocessed/sub-fslAchieva06/anat/sub-fslAchieva06_flip-1_mt-on_space-other_MTS.json index 640e6f614e..253d0f610f 100644 --- a/derivatives/data_preprocessed/sub-fslAchieva06/anat/sub-fslAchieva06_flip-1_mt-on_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-fslAchieva06/anat/sub-fslAchieva06_flip-1_mt-on_space-other_MTS.json @@ -1,62 +1,65 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 127.753, - "Manufacturer": "Philips", - "ManufacturersModelName": "Achieva", - "InstitutionName": "Fondazione_S.Lucia", - "InstitutionalDepartmentName": "Diagnostica_per_Immagine", - "DeviceSerialNumber": "34249", - "StationName": "PHILIPS-29CDACE", - "BodyPartExamined": "SPINE", - "PatientPosition": "HFS", - "ProcedureStepDescription": "FRATINI", - "SoftwareVersions": "5.4.1_5.4.1.1", - "MRAcquisitionType": "3D", - "SeriesDescription": 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"AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "PixelBandwidth": 260, "ImageOrientationPatientDICOM": [ - 0.999295, - -0.0367718, - 0.00760156, - 0.0367729, - 0.999324, + 0.999295, + -0.0367718, + 0.00760156, + 0.0367729, + 0.999324, 5.48061e-12 - ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20190410 (JP2:OpenJPEG) (JP-LS:CharLS) Clang8.1.0", - "Dcm2bidsVersion": "2.1.4" + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20190410 (JP2:OpenJPEG) (JP-LS:CharLS) Clang8.1.0", + "Dcm2bidsVersion": "2.1.4", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-fslAchieva06/anat/sub-fslAchieva06_flip-2_mt-off_space-other_MTS.json b/derivatives/data_preprocessed/sub-fslAchieva06/anat/sub-fslAchieva06_flip-2_mt-off_space-other_MTS.json index 9c50c88f2c..597f1f2405 100644 --- a/derivatives/data_preprocessed/sub-fslAchieva06/anat/sub-fslAchieva06_flip-2_mt-off_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-fslAchieva06/anat/sub-fslAchieva06_flip-2_mt-off_space-other_MTS.json @@ -1,62 +1,65 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 127.753, - "Manufacturer": "Philips", - "ManufacturersModelName": "Achieva", - "InstitutionName": "Fondazione_S.Lucia", - "InstitutionalDepartmentName": "Diagnostica_per_Immagine", - "DeviceSerialNumber": "34249", - "StationName": "PHILIPS-29CDACE", - "BodyPartExamined": "SPINE", - "PatientPosition": "HFS", - "ProcedureStepDescription": "FRATINI", - "SoftwareVersions": "5.4.1_5.4.1.1", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-T1", - "ProtocolName": "GRE-T1", - "ScanningSequence": "GR", - "SequenceVariant": "SP", - "ScanOptions": "PFF", + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 127.753, + "Manufacturer": "Philips", + "ManufacturersModelName": "Achieva", + "InstitutionName": "Fondazione_S.Lucia", + "InstitutionalDepartmentName": "Diagnostica_per_Immagine", + "DeviceSerialNumber": "34249", + "StationName": "PHILIPS-29CDACE", + "BodyPartExamined": "SPINE", + "PatientPosition": "HFS", + "ProcedureStepDescription": "FRATINI", + "SoftwareVersions": "5.4.1_5.4.1.1", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-T1", + "ProtocolName": "GRE-T1", + "ScanningSequence": "GR", + "SequenceVariant": "SP", + "ScanOptions": "PFF", "ImageType": [ - "ORIGINAL", - "PRIMARY", - "M", - "FFE", - "M", + "ORIGINAL", + "PRIMARY", + "M", + "FFE", + "M", "FFE" - ], - "SeriesNumber": 601, - "AcquisitionTime": "17:31:31.350000", - "AcquisitionNumber": 6, - "PhilipsRWVSlope": 1.47106, - "PhilipsRWVIntercept": 0, - "PhilipsRescaleSlope": 1.47106, - "PhilipsRescaleIntercept": 0, - "PhilipsScaleSlope": 4.74925e-05, - "UsePhilipsFloatNotDisplayScaling": 1, - "SliceThickness": 5, - "SpacingBetweenSlices": 5, - "SAR": 0.0413686, - "EchoTime": 0.002001, - "RepetitionTime": 0.103, - "FlipAngle": 15, - "CoilString": "MULTI_COIL", - "PercentPhaseFOV": 100, - "PhaseEncodingSteps": 256, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 256, - "PixelBandwidth": 260, + ], + "SeriesNumber": 601, + "AcquisitionTime": "17:31:31.350000", + "AcquisitionNumber": 6, + "PhilipsRWVSlope": 1.47106, + "PhilipsRWVIntercept": 0, + "PhilipsRescaleSlope": 1.47106, + "PhilipsRescaleIntercept": 0, + "PhilipsScaleSlope": 4.74925e-05, + "UsePhilipsFloatNotDisplayScaling": 1, + "SliceThickness": 5, + "SpacingBetweenSlices": 5, + "SAR": 0.0413686, + "EchoTime": 0.002001, + "RepetitionTime": 0.103, + "FlipAngle": 15, + "CoilString": "MULTI_COIL", + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 256, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "PixelBandwidth": 260, "ImageOrientationPatientDICOM": [ - 0.999295, - -0.0367718, - 0.00760156, - 0.0367729, - 0.999324, + 0.999295, + -0.0367718, + 0.00760156, + 0.0367729, + 0.999324, 5.48061e-12 - ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20190410 (JP2:OpenJPEG) (JP-LS:CharLS) Clang8.1.0", - "Dcm2bidsVersion": "2.1.4" + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20190410 (JP2:OpenJPEG) (JP-LS:CharLS) Clang8.1.0", + "Dcm2bidsVersion": "2.1.4", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-fslAchieva06/anat/sub-fslAchieva06_space-other_T1w.json b/derivatives/data_preprocessed/sub-fslAchieva06/anat/sub-fslAchieva06_space-other_T1w.json index ac0b711cab..5bb595ef33 100644 --- a/derivatives/data_preprocessed/sub-fslAchieva06/anat/sub-fslAchieva06_space-other_T1w.json +++ b/derivatives/data_preprocessed/sub-fslAchieva06/anat/sub-fslAchieva06_space-other_T1w.json @@ -1,63 +1,67 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 127.753, - "Manufacturer": "Philips", - "ManufacturersModelName": "Achieva", - "InstitutionName": "Fondazione_S.Lucia", - "InstitutionalDepartmentName": "Diagnostica_per_Immagine", - "DeviceSerialNumber": "34249", - "StationName": "PHILIPS-29CDACE", - "BodyPartExamined": "SPINE", - "PatientPosition": "HFS", - "ProcedureStepDescription": "FRATINI", - "SoftwareVersions": "5.4.1_5.4.1.1", - "MRAcquisitionType": "3D", - "SeriesDescription": "T1w", - "ProtocolName": "T1w", - "ScanningSequence": "GR", - "SequenceVariant": "MP", - "ScanOptions": "OTHER", + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 127.753, + "Manufacturer": "Philips", + "ManufacturersModelName": "Achieva", + "InstitutionName": "Fondazione_S.Lucia", + "InstitutionalDepartmentName": "Diagnostica_per_Immagine", + "DeviceSerialNumber": "34249", + "StationName": "PHILIPS-29CDACE", + "BodyPartExamined": "SPINE", + "PatientPosition": "HFS", + "ProcedureStepDescription": "FRATINI", + "SoftwareVersions": "5.4.1_5.4.1.1", + "MRAcquisitionType": "3D", + "SeriesDescription": "T1w", + "ProtocolName": "T1w", + "ScanningSequence": "GR", + "SequenceVariant": "MP", + "ScanOptions": "OTHER", "ImageType": [ - "ORIGINAL", - "PRIMARY", - "M", - "FFE", - "M", + "ORIGINAL", + "PRIMARY", + "M", + "FFE", + "M", "FFE" - ], - "SeriesNumber": 201, - "AcquisitionTime": "17:03:14.050000", - "AcquisitionNumber": 2, - "PhilipsRWVSlope": 3.7177, - "PhilipsRWVIntercept": 0, - "PhilipsRescaleSlope": 3.7177, - "PhilipsRescaleIntercept": 0, - "PhilipsScaleSlope": 0.000336343, - "UsePhilipsFloatNotDisplayScaling": 1, - "SliceThickness": 1, - "SpacingBetweenSlices": 1, - "SAR": 0.417876, - "EchoTime": 0.00356, - "RepetitionTime": 0.0076843, - "FlipAngle": 9, - "CoilString": "MULTI_COIL", - "PercentPhaseFOV": 81.25, - "EchoTrainLength": 246, - "PhaseEncodingSteps": 320, - "AcquisitionMatrixPE": 320, - "ReconMatrixPE": 320, - "PixelBandwidth": 191, + ], + "SeriesNumber": 201, + "AcquisitionTime": "17:03:14.050000", + "AcquisitionNumber": 2, + "PhilipsRWVSlope": 3.7177, + "PhilipsRWVIntercept": 0, + "PhilipsRescaleSlope": 3.7177, + "PhilipsRescaleIntercept": 0, + "PhilipsScaleSlope": 0.000336343, + "UsePhilipsFloatNotDisplayScaling": 1, + "SliceThickness": 1, + "SpacingBetweenSlices": 1, + "SAR": 0.417876, + "EchoTime": 0.00356, + "RepetitionTime": 0.0076843, + "FlipAngle": 9, + "CoilString": "MULTI_COIL", + "PercentPhaseFOV": 81.25, + "EchoTrainLength": 246, + "PhaseEncodingSteps": 320, + "AcquisitionMatrixPE": 320, + "ReconMatrixPE": 320, + "PixelBandwidth": 191, "ImageOrientationPatientDICOM": [ - 0.0367729, - 0.999324, - 5.48061e-12, - 0.00759642, - -0.000279531, + 0.0367729, + 0.999324, + 5.48061e-12, + 0.00759642, + -0.000279531, -0.999971 - ], - "InPlanePhaseEncodingDirectionDICOM": "ROW", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20190410 (JP2:OpenJPEG) (JP-LS:CharLS) Clang8.1.0", - "Dcm2bidsVersion": "2.1.4" + ], + "InPlanePhaseEncodingDirectionDICOM": "ROW", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20190410 (JP2:OpenJPEG) (JP-LS:CharLS) Clang8.1.0", + "Dcm2bidsVersion": "2.1.4", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-fslAchieva06/anat/sub-fslAchieva06_space-other_T2star.json b/derivatives/data_preprocessed/sub-fslAchieva06/anat/sub-fslAchieva06_space-other_T2star.json index e61446f981..90a3320a97 100644 --- a/derivatives/data_preprocessed/sub-fslAchieva06/anat/sub-fslAchieva06_space-other_T2star.json +++ b/derivatives/data_preprocessed/sub-fslAchieva06/anat/sub-fslAchieva06_space-other_T2star.json @@ -62,5 +62,9 @@ "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20190410 (JP2:OpenJPEG) (JP-LS:CharLS) Clang8.1.0", "Dcm2bidsVersion": "2.1.4", - "AcquisitionDuration": 242.5 + "AcquisitionDuration": 242.5, + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-fslAchieva06/anat/sub-fslAchieva06_space-other_T2w.json b/derivatives/data_preprocessed/sub-fslAchieva06/anat/sub-fslAchieva06_space-other_T2w.json index f0313c58a9..92dbf5119c 100644 --- a/derivatives/data_preprocessed/sub-fslAchieva06/anat/sub-fslAchieva06_space-other_T2w.json +++ b/derivatives/data_preprocessed/sub-fslAchieva06/anat/sub-fslAchieva06_space-other_T2w.json @@ -1,63 +1,67 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 127.753, - "Manufacturer": "Philips", - "ManufacturersModelName": "Achieva", - "InstitutionName": "Fondazione_S.Lucia", - "InstitutionalDepartmentName": "Diagnostica_per_Immagine", - "DeviceSerialNumber": "34249", - "StationName": "PHILIPS-29CDACE", - "BodyPartExamined": "SPINE", - "PatientPosition": "HFS", - "ProcedureStepDescription": "FRATINI", - "SoftwareVersions": "5.4.1_5.4.1.1", - "MRAcquisitionType": "3D", - "SeriesDescription": "T2w", - "ProtocolName": "T2w", - "ScanningSequence": "SE", - "SequenceVariant": "SK", - "ScanOptions": "PFP", + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 127.753, + "Manufacturer": "Philips", + "ManufacturersModelName": "Achieva", + "InstitutionName": "Fondazione_S.Lucia", + "InstitutionalDepartmentName": "Diagnostica_per_Immagine", + "DeviceSerialNumber": "34249", + "StationName": "PHILIPS-29CDACE", + "BodyPartExamined": "SPINE", + "PatientPosition": "HFS", + "ProcedureStepDescription": "FRATINI", + "SoftwareVersions": "5.4.1_5.4.1.1", + "MRAcquisitionType": "3D", + "SeriesDescription": "T2w", + "ProtocolName": "T2w", + "ScanningSequence": "SE", + "SequenceVariant": "SK", + "ScanOptions": "PFP", "ImageType": [ - "ORIGINAL", - "PRIMARY", - "M", - "SE", - "M", + "ORIGINAL", + "PRIMARY", + "M", + "SE", + "M", "SE" - ], - "SeriesNumber": 301, - "AcquisitionTime": "17:07:49.730000", - "AcquisitionNumber": 3, - "PhilipsRWVSlope": 1.41758, - "PhilipsRWVIntercept": 0, - "PhilipsRescaleSlope": 1.41758, - "PhilipsRescaleIntercept": 0, - "PhilipsScaleSlope": 0.00010458, - "UsePhilipsFloatNotDisplayScaling": 1, - "SliceThickness": 0.8, - "SpacingBetweenSlices": 0.8, - "SAR": 1.29941, - "EchoTime": 0.12, - "RepetitionTime": 3.5, - "FlipAngle": 90, - "CoilString": "MULTI_COIL", - "PercentPhaseFOV": 92.5, - "EchoTrainLength": 92, - "PhaseEncodingSteps": 316, - "AcquisitionMatrixPE": 316, - "ReconMatrixPE": 320, - "PixelBandwidth": 368, + ], + "SeriesNumber": 301, + "AcquisitionTime": "17:07:49.730000", + "AcquisitionNumber": 3, + "PhilipsRWVSlope": 1.41758, + "PhilipsRWVIntercept": 0, + "PhilipsRescaleSlope": 1.41758, + "PhilipsRescaleIntercept": 0, + "PhilipsScaleSlope": 0.00010458, + "UsePhilipsFloatNotDisplayScaling": 1, + "SliceThickness": 0.8, + "SpacingBetweenSlices": 0.8, + "SAR": 1.29941, + "EchoTime": 0.12, + "RepetitionTime": 3.5, + "FlipAngle": 90, + "CoilString": "MULTI_COIL", + "PercentPhaseFOV": 92.5, + "EchoTrainLength": 92, + "PhaseEncodingSteps": 316, + "AcquisitionMatrixPE": 316, + "ReconMatrixPE": 320, + "PixelBandwidth": 368, "ImageOrientationPatientDICOM": [ - 0.0367729, - 0.999324, - 5.48061e-12, - 0.00759642, - -0.000279531, + 0.0367729, + 0.999324, + 5.48061e-12, + 0.00759642, + -0.000279531, -0.999971 - ], - "InPlanePhaseEncodingDirectionDICOM": "ROW", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20190410 (JP2:OpenJPEG) (JP-LS:CharLS) Clang8.1.0", - "Dcm2bidsVersion": "2.1.4" + ], + "InPlanePhaseEncodingDirectionDICOM": "ROW", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20190410 (JP2:OpenJPEG) (JP-LS:CharLS) Clang8.1.0", + "Dcm2bidsVersion": "2.1.4", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-fslPrisma01/anat/sub-fslPrisma01_flip-1_mt-on_space-other_MTS.json b/derivatives/data_preprocessed/sub-fslPrisma01/anat/sub-fslPrisma01_flip-1_mt-on_space-other_MTS.json index 9745bf0315..17955c77fc 100644 --- a/derivatives/data_preprocessed/sub-fslPrisma01/anat/sub-fslPrisma01_flip-1_mt-on_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-fslPrisma01/anat/sub-fslPrisma01_flip-1_mt-on_space-other_MTS.json @@ -74,5 +74,8 @@ "InPlanePhaseEncodingDirectionDICOM": "COL", "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20200331", - "Dcm2bidsVersion": "2.1.4" + "Dcm2bidsVersion": "2.1.4", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-fslPrisma01/anat/sub-fslPrisma01_flip-2_mt-off_space-other_MTS.json b/derivatives/data_preprocessed/sub-fslPrisma01/anat/sub-fslPrisma01_flip-2_mt-off_space-other_MTS.json index 093fb40527..f494d22523 100644 --- a/derivatives/data_preprocessed/sub-fslPrisma01/anat/sub-fslPrisma01_flip-2_mt-off_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-fslPrisma01/anat/sub-fslPrisma01_flip-2_mt-off_space-other_MTS.json @@ -73,5 +73,8 @@ "InPlanePhaseEncodingDirectionDICOM": "COL", "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20200331", - "Dcm2bidsVersion": "2.1.4" + "Dcm2bidsVersion": "2.1.4", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-fslPrisma01/anat/sub-fslPrisma01_space-other_T1w.json b/derivatives/data_preprocessed/sub-fslPrisma01/anat/sub-fslPrisma01_space-other_T1w.json index afb377e534..76d527e4ab 100644 --- a/derivatives/data_preprocessed/sub-fslPrisma01/anat/sub-fslPrisma01_space-other_T1w.json +++ b/derivatives/data_preprocessed/sub-fslPrisma01/anat/sub-fslPrisma01_space-other_T1w.json @@ -76,5 +76,9 @@ "InPlanePhaseEncodingDirectionDICOM": "ROW", "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20200331", - "Dcm2bidsVersion": "2.1.4" + "Dcm2bidsVersion": "2.1.4", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-fslPrisma01/anat/sub-fslPrisma01_space-other_T2star.json b/derivatives/data_preprocessed/sub-fslPrisma01/anat/sub-fslPrisma01_space-other_T2star.json index 2d97812117..16b3c77e43 100644 --- a/derivatives/data_preprocessed/sub-fslPrisma01/anat/sub-fslPrisma01_space-other_T2star.json +++ b/derivatives/data_preprocessed/sub-fslPrisma01/anat/sub-fslPrisma01_space-other_T2star.json @@ -96,5 +96,9 @@ "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20200331", "Dcm2bidsVersion": "2.1.4", - "AcquisitionDuration": 285.0 + "AcquisitionDuration": 285.0, + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-fslPrisma01/anat/sub-fslPrisma01_space-other_T2w.json b/derivatives/data_preprocessed/sub-fslPrisma01/anat/sub-fslPrisma01_space-other_T2w.json index b3d4908ab7..2d18f6415a 100644 --- a/derivatives/data_preprocessed/sub-fslPrisma01/anat/sub-fslPrisma01_space-other_T2w.json +++ b/derivatives/data_preprocessed/sub-fslPrisma01/anat/sub-fslPrisma01_space-other_T2w.json @@ -79,5 +79,9 @@ "InPlanePhaseEncodingDirectionDICOM": "COL", "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20200331", - "Dcm2bidsVersion": "2.1.4" + "Dcm2bidsVersion": "2.1.4", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-fslPrisma02/anat/sub-fslPrisma02_flip-1_mt-on_space-other_MTS.json b/derivatives/data_preprocessed/sub-fslPrisma02/anat/sub-fslPrisma02_flip-1_mt-on_space-other_MTS.json index 642f618c70..cb3d88ee8e 100644 --- a/derivatives/data_preprocessed/sub-fslPrisma02/anat/sub-fslPrisma02_flip-1_mt-on_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-fslPrisma02/anat/sub-fslPrisma02_flip-1_mt-on_space-other_MTS.json @@ -74,5 +74,8 @@ "InPlanePhaseEncodingDirectionDICOM": "COL", "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20200331", - "Dcm2bidsVersion": "2.1.4" + "Dcm2bidsVersion": "2.1.4", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-fslPrisma02/anat/sub-fslPrisma02_flip-2_mt-off_space-other_MTS.json b/derivatives/data_preprocessed/sub-fslPrisma02/anat/sub-fslPrisma02_flip-2_mt-off_space-other_MTS.json index b871096f88..8e6f7a1caf 100644 --- a/derivatives/data_preprocessed/sub-fslPrisma02/anat/sub-fslPrisma02_flip-2_mt-off_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-fslPrisma02/anat/sub-fslPrisma02_flip-2_mt-off_space-other_MTS.json @@ -73,5 +73,8 @@ "InPlanePhaseEncodingDirectionDICOM": "COL", "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20200331", - "Dcm2bidsVersion": "2.1.4" + "Dcm2bidsVersion": "2.1.4", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-fslPrisma02/anat/sub-fslPrisma02_space-other_T1w.json b/derivatives/data_preprocessed/sub-fslPrisma02/anat/sub-fslPrisma02_space-other_T1w.json index 79423958f1..4d42712615 100644 --- a/derivatives/data_preprocessed/sub-fslPrisma02/anat/sub-fslPrisma02_space-other_T1w.json +++ b/derivatives/data_preprocessed/sub-fslPrisma02/anat/sub-fslPrisma02_space-other_T1w.json @@ -76,5 +76,9 @@ "InPlanePhaseEncodingDirectionDICOM": "ROW", "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20200331", - "Dcm2bidsVersion": "2.1.4" + "Dcm2bidsVersion": "2.1.4", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-fslPrisma02/anat/sub-fslPrisma02_space-other_T2star.json b/derivatives/data_preprocessed/sub-fslPrisma02/anat/sub-fslPrisma02_space-other_T2star.json index 748262ffa3..bf296300f9 100644 --- a/derivatives/data_preprocessed/sub-fslPrisma02/anat/sub-fslPrisma02_space-other_T2star.json +++ b/derivatives/data_preprocessed/sub-fslPrisma02/anat/sub-fslPrisma02_space-other_T2star.json @@ -96,5 +96,9 @@ "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20200331", "Dcm2bidsVersion": "2.1.4", - "AcquisitionDuration": 285.0 + "AcquisitionDuration": 285.0, + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-fslPrisma02/anat/sub-fslPrisma02_space-other_T2w.json b/derivatives/data_preprocessed/sub-fslPrisma02/anat/sub-fslPrisma02_space-other_T2w.json index e08a78d6aa..b3f2e39a02 100644 --- a/derivatives/data_preprocessed/sub-fslPrisma02/anat/sub-fslPrisma02_space-other_T2w.json +++ b/derivatives/data_preprocessed/sub-fslPrisma02/anat/sub-fslPrisma02_space-other_T2w.json @@ -79,5 +79,9 @@ "InPlanePhaseEncodingDirectionDICOM": "COL", "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20200331", - "Dcm2bidsVersion": "2.1.4" + "Dcm2bidsVersion": "2.1.4", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-fslPrisma03/anat/sub-fslPrisma03_flip-1_mt-on_space-other_MTS.json b/derivatives/data_preprocessed/sub-fslPrisma03/anat/sub-fslPrisma03_flip-1_mt-on_space-other_MTS.json index 8732b7dfaf..936eb00f8d 100644 --- a/derivatives/data_preprocessed/sub-fslPrisma03/anat/sub-fslPrisma03_flip-1_mt-on_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-fslPrisma03/anat/sub-fslPrisma03_flip-1_mt-on_space-other_MTS.json @@ -74,5 +74,8 @@ "InPlanePhaseEncodingDirectionDICOM": "COL", "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20200331", - "Dcm2bidsVersion": "2.1.4" + "Dcm2bidsVersion": "2.1.4", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-fslPrisma03/anat/sub-fslPrisma03_flip-2_mt-off_space-other_MTS.json b/derivatives/data_preprocessed/sub-fslPrisma03/anat/sub-fslPrisma03_flip-2_mt-off_space-other_MTS.json index d7c4b97957..23001bd504 100644 --- a/derivatives/data_preprocessed/sub-fslPrisma03/anat/sub-fslPrisma03_flip-2_mt-off_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-fslPrisma03/anat/sub-fslPrisma03_flip-2_mt-off_space-other_MTS.json @@ -73,5 +73,8 @@ "InPlanePhaseEncodingDirectionDICOM": "COL", "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20200331", - "Dcm2bidsVersion": "2.1.4" + "Dcm2bidsVersion": "2.1.4", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-fslPrisma03/anat/sub-fslPrisma03_space-other_T1w.json b/derivatives/data_preprocessed/sub-fslPrisma03/anat/sub-fslPrisma03_space-other_T1w.json index 8fbc561704..85f08e74c3 100644 --- a/derivatives/data_preprocessed/sub-fslPrisma03/anat/sub-fslPrisma03_space-other_T1w.json +++ b/derivatives/data_preprocessed/sub-fslPrisma03/anat/sub-fslPrisma03_space-other_T1w.json @@ -76,5 +76,9 @@ "InPlanePhaseEncodingDirectionDICOM": "ROW", "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20200331", - "Dcm2bidsVersion": "2.1.4" + "Dcm2bidsVersion": "2.1.4", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-fslPrisma03/anat/sub-fslPrisma03_space-other_T2star.json b/derivatives/data_preprocessed/sub-fslPrisma03/anat/sub-fslPrisma03_space-other_T2star.json index f6297603b4..16b307816f 100644 --- a/derivatives/data_preprocessed/sub-fslPrisma03/anat/sub-fslPrisma03_space-other_T2star.json +++ b/derivatives/data_preprocessed/sub-fslPrisma03/anat/sub-fslPrisma03_space-other_T2star.json @@ -96,5 +96,9 @@ "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20200331", "Dcm2bidsVersion": "2.1.4", - "AcquisitionDuration": 285.0 + "AcquisitionDuration": 285.0, + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-fslPrisma03/anat/sub-fslPrisma03_space-other_T2w.json b/derivatives/data_preprocessed/sub-fslPrisma03/anat/sub-fslPrisma03_space-other_T2w.json index e7ea74bc99..eb0ccef7be 100644 --- a/derivatives/data_preprocessed/sub-fslPrisma03/anat/sub-fslPrisma03_space-other_T2w.json +++ b/derivatives/data_preprocessed/sub-fslPrisma03/anat/sub-fslPrisma03_space-other_T2w.json @@ -79,5 +79,9 @@ "InPlanePhaseEncodingDirectionDICOM": "COL", "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20200331", - "Dcm2bidsVersion": "2.1.4" + "Dcm2bidsVersion": "2.1.4", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-fslPrisma04/anat/sub-fslPrisma04_flip-1_mt-on_space-other_MTS.json b/derivatives/data_preprocessed/sub-fslPrisma04/anat/sub-fslPrisma04_flip-1_mt-on_space-other_MTS.json index a05ac9fd9b..9871555d92 100644 --- a/derivatives/data_preprocessed/sub-fslPrisma04/anat/sub-fslPrisma04_flip-1_mt-on_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-fslPrisma04/anat/sub-fslPrisma04_flip-1_mt-on_space-other_MTS.json @@ -74,5 +74,8 @@ "InPlanePhaseEncodingDirectionDICOM": "COL", "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20200331", - "Dcm2bidsVersion": "2.1.4" + "Dcm2bidsVersion": "2.1.4", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-fslPrisma04/anat/sub-fslPrisma04_flip-2_mt-off_space-other_MTS.json b/derivatives/data_preprocessed/sub-fslPrisma04/anat/sub-fslPrisma04_flip-2_mt-off_space-other_MTS.json index f358d5ebf9..d42b541100 100644 --- a/derivatives/data_preprocessed/sub-fslPrisma04/anat/sub-fslPrisma04_flip-2_mt-off_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-fslPrisma04/anat/sub-fslPrisma04_flip-2_mt-off_space-other_MTS.json @@ -73,5 +73,8 @@ "InPlanePhaseEncodingDirectionDICOM": "COL", "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20200331", - "Dcm2bidsVersion": "2.1.4" + "Dcm2bidsVersion": "2.1.4", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-fslPrisma04/anat/sub-fslPrisma04_space-other_T1w.json b/derivatives/data_preprocessed/sub-fslPrisma04/anat/sub-fslPrisma04_space-other_T1w.json index a580cbac85..d77acfd4a8 100644 --- a/derivatives/data_preprocessed/sub-fslPrisma04/anat/sub-fslPrisma04_space-other_T1w.json +++ b/derivatives/data_preprocessed/sub-fslPrisma04/anat/sub-fslPrisma04_space-other_T1w.json @@ -76,5 +76,9 @@ "InPlanePhaseEncodingDirectionDICOM": "ROW", "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20200331", - "Dcm2bidsVersion": "2.1.4" + "Dcm2bidsVersion": "2.1.4", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-fslPrisma04/anat/sub-fslPrisma04_space-other_T2star.json b/derivatives/data_preprocessed/sub-fslPrisma04/anat/sub-fslPrisma04_space-other_T2star.json index d1dd6a100c..da66eee2ff 100644 --- a/derivatives/data_preprocessed/sub-fslPrisma04/anat/sub-fslPrisma04_space-other_T2star.json +++ b/derivatives/data_preprocessed/sub-fslPrisma04/anat/sub-fslPrisma04_space-other_T2star.json @@ -96,5 +96,9 @@ "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20200331", "Dcm2bidsVersion": "2.1.4", - "AcquisitionDuration": 285.0 + "AcquisitionDuration": 285.0, + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-fslPrisma04/anat/sub-fslPrisma04_space-other_T2w.json b/derivatives/data_preprocessed/sub-fslPrisma04/anat/sub-fslPrisma04_space-other_T2w.json index 6b4cc13a54..9ab9a76975 100644 --- a/derivatives/data_preprocessed/sub-fslPrisma04/anat/sub-fslPrisma04_space-other_T2w.json +++ b/derivatives/data_preprocessed/sub-fslPrisma04/anat/sub-fslPrisma04_space-other_T2w.json @@ -79,5 +79,9 @@ "InPlanePhaseEncodingDirectionDICOM": "COL", "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20200331", - "Dcm2bidsVersion": "2.1.4" + "Dcm2bidsVersion": "2.1.4", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-fslPrisma05/anat/sub-fslPrisma05_flip-1_mt-on_space-other_MTS.json b/derivatives/data_preprocessed/sub-fslPrisma05/anat/sub-fslPrisma05_flip-1_mt-on_space-other_MTS.json index ba36ee98ba..5c3087fbf8 100644 --- a/derivatives/data_preprocessed/sub-fslPrisma05/anat/sub-fslPrisma05_flip-1_mt-on_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-fslPrisma05/anat/sub-fslPrisma05_flip-1_mt-on_space-other_MTS.json @@ -74,5 +74,8 @@ "InPlanePhaseEncodingDirectionDICOM": "COL", "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20200331", - "Dcm2bidsVersion": "2.1.4" + "Dcm2bidsVersion": "2.1.4", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-fslPrisma05/anat/sub-fslPrisma05_flip-2_mt-off_space-other_MTS.json b/derivatives/data_preprocessed/sub-fslPrisma05/anat/sub-fslPrisma05_flip-2_mt-off_space-other_MTS.json index 86e60857c8..b3a04b18c8 100644 --- a/derivatives/data_preprocessed/sub-fslPrisma05/anat/sub-fslPrisma05_flip-2_mt-off_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-fslPrisma05/anat/sub-fslPrisma05_flip-2_mt-off_space-other_MTS.json @@ -73,5 +73,8 @@ "InPlanePhaseEncodingDirectionDICOM": "COL", "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20200331", - "Dcm2bidsVersion": "2.1.4" + "Dcm2bidsVersion": "2.1.4", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-fslPrisma05/anat/sub-fslPrisma05_space-other_T1w.json b/derivatives/data_preprocessed/sub-fslPrisma05/anat/sub-fslPrisma05_space-other_T1w.json index 1ea3f56e0f..921bec449e 100644 --- a/derivatives/data_preprocessed/sub-fslPrisma05/anat/sub-fslPrisma05_space-other_T1w.json +++ b/derivatives/data_preprocessed/sub-fslPrisma05/anat/sub-fslPrisma05_space-other_T1w.json @@ -76,5 +76,9 @@ "InPlanePhaseEncodingDirectionDICOM": "ROW", "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20200331", - "Dcm2bidsVersion": "2.1.4" + "Dcm2bidsVersion": "2.1.4", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-fslPrisma05/anat/sub-fslPrisma05_space-other_T2star.json b/derivatives/data_preprocessed/sub-fslPrisma05/anat/sub-fslPrisma05_space-other_T2star.json index b3f1cfb70a..7019f943d2 100644 --- a/derivatives/data_preprocessed/sub-fslPrisma05/anat/sub-fslPrisma05_space-other_T2star.json +++ b/derivatives/data_preprocessed/sub-fslPrisma05/anat/sub-fslPrisma05_space-other_T2star.json @@ -96,5 +96,9 @@ "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20200331", "Dcm2bidsVersion": "2.1.4", - "AcquisitionDuration": 285.0 + "AcquisitionDuration": 285.0, + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-fslPrisma05/anat/sub-fslPrisma05_space-other_T2w.json b/derivatives/data_preprocessed/sub-fslPrisma05/anat/sub-fslPrisma05_space-other_T2w.json index 1976c3b972..f4bfc62d6d 100644 --- a/derivatives/data_preprocessed/sub-fslPrisma05/anat/sub-fslPrisma05_space-other_T2w.json +++ b/derivatives/data_preprocessed/sub-fslPrisma05/anat/sub-fslPrisma05_space-other_T2w.json @@ -79,5 +79,9 @@ "InPlanePhaseEncodingDirectionDICOM": "COL", "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20200331", - "Dcm2bidsVersion": "2.1.4" + "Dcm2bidsVersion": "2.1.4", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-fslPrisma06/anat/sub-fslPrisma06_flip-1_mt-on_space-other_MTS.json b/derivatives/data_preprocessed/sub-fslPrisma06/anat/sub-fslPrisma06_flip-1_mt-on_space-other_MTS.json index 6ea73d139e..1eaa753e11 100644 --- a/derivatives/data_preprocessed/sub-fslPrisma06/anat/sub-fslPrisma06_flip-1_mt-on_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-fslPrisma06/anat/sub-fslPrisma06_flip-1_mt-on_space-other_MTS.json @@ -74,5 +74,8 @@ "InPlanePhaseEncodingDirectionDICOM": "COL", "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20200331", - "Dcm2bidsVersion": "2.1.4" + "Dcm2bidsVersion": "2.1.4", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-fslPrisma06/anat/sub-fslPrisma06_flip-2_mt-off_space-other_MTS.json b/derivatives/data_preprocessed/sub-fslPrisma06/anat/sub-fslPrisma06_flip-2_mt-off_space-other_MTS.json index 70589d754f..43219dbb10 100644 --- a/derivatives/data_preprocessed/sub-fslPrisma06/anat/sub-fslPrisma06_flip-2_mt-off_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-fslPrisma06/anat/sub-fslPrisma06_flip-2_mt-off_space-other_MTS.json @@ -73,5 +73,8 @@ "InPlanePhaseEncodingDirectionDICOM": "COL", "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20200331", - "Dcm2bidsVersion": "2.1.4" + "Dcm2bidsVersion": "2.1.4", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-fslPrisma06/anat/sub-fslPrisma06_space-other_T1w.json b/derivatives/data_preprocessed/sub-fslPrisma06/anat/sub-fslPrisma06_space-other_T1w.json index 6928329e27..d28bf0f98a 100644 --- a/derivatives/data_preprocessed/sub-fslPrisma06/anat/sub-fslPrisma06_space-other_T1w.json +++ b/derivatives/data_preprocessed/sub-fslPrisma06/anat/sub-fslPrisma06_space-other_T1w.json @@ -76,5 +76,9 @@ "InPlanePhaseEncodingDirectionDICOM": "ROW", "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20200331", - "Dcm2bidsVersion": "2.1.4" + "Dcm2bidsVersion": "2.1.4", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-fslPrisma06/anat/sub-fslPrisma06_space-other_T2star.json b/derivatives/data_preprocessed/sub-fslPrisma06/anat/sub-fslPrisma06_space-other_T2star.json index 05e5df4435..37558c0054 100644 --- a/derivatives/data_preprocessed/sub-fslPrisma06/anat/sub-fslPrisma06_space-other_T2star.json +++ b/derivatives/data_preprocessed/sub-fslPrisma06/anat/sub-fslPrisma06_space-other_T2star.json @@ -96,5 +96,9 @@ "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20200331", "Dcm2bidsVersion": "2.1.4", - "AcquisitionDuration": 285.0 + "AcquisitionDuration": 285.0, + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-fslPrisma06/anat/sub-fslPrisma06_space-other_T2w.json b/derivatives/data_preprocessed/sub-fslPrisma06/anat/sub-fslPrisma06_space-other_T2w.json index d78113d52c..fa4f22f4d3 100644 --- a/derivatives/data_preprocessed/sub-fslPrisma06/anat/sub-fslPrisma06_space-other_T2w.json +++ b/derivatives/data_preprocessed/sub-fslPrisma06/anat/sub-fslPrisma06_space-other_T2w.json @@ -79,5 +79,9 @@ "InPlanePhaseEncodingDirectionDICOM": "COL", "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20200331", - "Dcm2bidsVersion": "2.1.4" + "Dcm2bidsVersion": "2.1.4", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-geneva01/anat/sub-geneva01_flip-1_mt-on_space-other_MTS.json b/derivatives/data_preprocessed/sub-geneva01/anat/sub-geneva01_flip-1_mt-on_space-other_MTS.json index c3e8cf8ff2..ba28ce222a 100644 --- a/derivatives/data_preprocessed/sub-geneva01/anat/sub-geneva01_flip-1_mt-on_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-geneva01/anat/sub-geneva01_flip-1_mt-on_space-other_MTS.json @@ -1,66 +1,76 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.257, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma", - "InstitutionName": "Fondation_Campus_Biotech_Geneva", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "Chemin_des_Mines_9_Geneve_District_CH_1211", - "DeviceSerialNumber": "66054", - "StationName": "AWP66054", - "BodyPartExamined": "SPINE", - "PatientPosition": "HFS", - "ProcedureStepDescription": "D.Van_de_Ville_Nawal", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-MT1", - "ProtocolName": "GRE-MT1", - "ScanningSequence": "GR", - "SequenceVariant": "MTC_SP", - "ScanOptions": "MT", - "SequenceName": "_fl3d1", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "DIS2D"], - "SeriesNumber": 5, - "AcquisitionTime": "15:18:4.960000", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SAR": 0.637001, - "EchoTime": 0.00313, - "RepetitionTime": 0.035, - "FlipAngle": 9, - "PartialFourier": 1, - "BaseResolution": 256, - "ShimSetting": [ - -1280, - -11913, - 6194, - -1368, - -87, - 1408, - -296, - 23 ], - "TxRefAmp": 300.384, - "PhaseResolution": 1, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC7;NC1,2", - "CoilString": "HC7;NC1_2", - "PulseSequenceDetails": "%SiemensSeq%_gre", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 100, - "PhaseEncodingSteps": 255, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 256, - "PixelBandwidth": 260, - "DwellTime": 7.5e-06, - "ImageOrientationPatientDICOM": [ - 1, - 0, - 0, - 0, - 0.991445, - 0.130526 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181125 (JP2:OpenJPEG) (JP-LS:CharLS) Clang8.1.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 123.257, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma", + "InstitutionName": "Fondation_Campus_Biotech_Geneva", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "Chemin_des_Mines_9_Geneve_District_CH_1211", + "DeviceSerialNumber": "66054", + "StationName": "AWP66054", + "BodyPartExamined": "SPINE", + "PatientPosition": "HFS", + "ProcedureStepDescription": "D.Van_de_Ville_Nawal", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-MT1", + "ProtocolName": "GRE-MT1", + "ScanningSequence": "GR", + "SequenceVariant": "MTC_SP", + "ScanOptions": "MT", + "SequenceName": "_fl3d1", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "DIS2D" + ], + "SeriesNumber": 5, + "AcquisitionTime": "15:18:4.960000", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SAR": 0.637001, + "EchoTime": 0.00313, + "RepetitionTime": 0.035, + "FlipAngle": 9, + "PartialFourier": 1, + "BaseResolution": 256, + "ShimSetting": [ + -1280, + -11913, + 6194, + -1368, + -87, + 1408, + -296, + 23 + ], + "TxRefAmp": 300.384, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC7;NC1,2", + "CoilString": "HC7;NC1_2", + "PulseSequenceDetails": "%SiemensSeq%_gre", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 255, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "PixelBandwidth": 260, + "DwellTime": 7.5e-06, + "ImageOrientationPatientDICOM": [ + 1, + 0, + 0, + 0, + 0.991445, + 0.130526 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181125 (JP2:OpenJPEG) (JP-LS:CharLS) Clang8.1.0", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-geneva01/anat/sub-geneva01_flip-2_mt-off_space-other_MTS.json b/derivatives/data_preprocessed/sub-geneva01/anat/sub-geneva01_flip-2_mt-off_space-other_MTS.json index 1c2ff58cc7..8768b33168 100644 --- a/derivatives/data_preprocessed/sub-geneva01/anat/sub-geneva01_flip-2_mt-off_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-geneva01/anat/sub-geneva01_flip-2_mt-off_space-other_MTS.json @@ -1,65 +1,75 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.257, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma", - "InstitutionName": "Fondation_Campus_Biotech_Geneva", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "Chemin_des_Mines_9_Geneve_District_CH_1211", - "DeviceSerialNumber": "66054", - "StationName": "AWP66054", - "BodyPartExamined": "SPINE", - "PatientPosition": "HFS", - "ProcedureStepDescription": "D.Van_de_Ville_Nawal", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-T1w", - "ProtocolName": "GRE-T1w", - "ScanningSequence": "GR", - "SequenceVariant": "SP", - "SequenceName": "_fl3d1", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "DIS2D"], - "SeriesNumber": 7, - "AcquisitionTime": "15:22:30.937500", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SAR": 0.0413012, - "EchoTime": 0.00313, - "RepetitionTime": 0.015, - "FlipAngle": 15, - "PartialFourier": 1, - "BaseResolution": 256, - "ShimSetting": [ - -1280, - -11913, - 6194, - -1368, - -87, - 1408, - -296, - 23 ], - "TxRefAmp": 300.384, - "PhaseResolution": 1, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC7;NC1,2", - "CoilString": "HC7;NC1_2", - "PulseSequenceDetails": "%SiemensSeq%_gre", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 100, - "PhaseEncodingSteps": 255, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 256, - "PixelBandwidth": 260, - "DwellTime": 7.5e-06, - "ImageOrientationPatientDICOM": [ - 1, - 0, - 0, - 0, - 0.991445, - 0.130526 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181125 (JP2:OpenJPEG) (JP-LS:CharLS) Clang8.1.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 123.257, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma", + "InstitutionName": "Fondation_Campus_Biotech_Geneva", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "Chemin_des_Mines_9_Geneve_District_CH_1211", + "DeviceSerialNumber": "66054", + "StationName": "AWP66054", + "BodyPartExamined": "SPINE", + "PatientPosition": "HFS", + "ProcedureStepDescription": "D.Van_de_Ville_Nawal", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-T1w", + "ProtocolName": "GRE-T1w", + "ScanningSequence": "GR", + "SequenceVariant": "SP", + "SequenceName": "_fl3d1", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "DIS2D" + ], + "SeriesNumber": 7, + "AcquisitionTime": "15:22:30.937500", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SAR": 0.0413012, + "EchoTime": 0.00313, + "RepetitionTime": 0.015, + "FlipAngle": 15, + "PartialFourier": 1, + "BaseResolution": 256, + "ShimSetting": [ + -1280, + -11913, + 6194, + -1368, + -87, + 1408, + -296, + 23 + ], + "TxRefAmp": 300.384, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC7;NC1,2", + "CoilString": "HC7;NC1_2", + "PulseSequenceDetails": "%SiemensSeq%_gre", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 255, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "PixelBandwidth": 260, + "DwellTime": 7.5e-06, + "ImageOrientationPatientDICOM": [ + 1, + 0, + 0, + 0, + 0.991445, + 0.130526 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181125 (JP2:OpenJPEG) (JP-LS:CharLS) Clang8.1.0", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-geneva01/anat/sub-geneva01_space-other_T1w.json b/derivatives/data_preprocessed/sub-geneva01/anat/sub-geneva01_space-other_T1w.json index 006714ca84..1d6796cc36 100644 --- a/derivatives/data_preprocessed/sub-geneva01/anat/sub-geneva01_space-other_T1w.json +++ b/derivatives/data_preprocessed/sub-geneva01/anat/sub-geneva01_space-other_T1w.json @@ -1,67 +1,80 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.257, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma", - "InstitutionName": "Fondation_Campus_Biotech_Geneva", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "Chemin_des_Mines_9_Geneve_District_CH_1211", - "DeviceSerialNumber": "66054", - "StationName": "AWP66054", - "BodyPartExamined": "SPINE", - "PatientPosition": "HFS", - "ProcedureStepDescription": "D.Van_de_Ville_Nawal", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "T1w", - "ProtocolName": "T1w", - "ScanningSequence": "GR_IR", - "SequenceVariant": "SK_SP_MP", - "ScanOptions": "IR", - "SequenceName": "_tfl3d1_16", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS3D", "DIS2D"], - "SeriesNumber": 2, - "AcquisitionTime": "15:04:12.047500", - "AcquisitionNumber": 1, - "SliceThickness": 1, - "SAR": 0.0737571, - "EchoTime": 0.00372, - "RepetitionTime": 2, - "InversionTime": 1, - "FlipAngle": 9, - "PartialFourier": 1, - "BaseResolution": 320, - "ShimSetting": [ - -1265, - -11721, - 6208, - -36, - 147, - 0, - -47, - 20 ], - "TxRefAmp": 282.099, - "PhaseResolution": 1, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC1-7;NC1,2", - "CoilString": "HC1-7;NC1_2", - "PulseSequenceDetails": "%SiemensSeq%_tfl", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 81.25, - "PhaseEncodingSteps": 259, - "AcquisitionMatrixPE": 260, - "ReconMatrixPE": 320, - "PixelBandwidth": 150, - "DwellTime": 1.04e-05, - "ImageOrientationPatientDICOM": [ - 0, - 1, - 0, - 0, - 0, - -1 ], - "InPlanePhaseEncodingDirectionDICOM": "ROW", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181125 (JP2:OpenJPEG) (JP-LS:CharLS) Clang8.1.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 123.257, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma", + "InstitutionName": "Fondation_Campus_Biotech_Geneva", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "Chemin_des_Mines_9_Geneve_District_CH_1211", + "DeviceSerialNumber": "66054", + "StationName": "AWP66054", + "BodyPartExamined": "SPINE", + "PatientPosition": "HFS", + "ProcedureStepDescription": "D.Van_de_Ville_Nawal", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "T1w", + "ProtocolName": "T1w", + "ScanningSequence": "GR_IR", + "SequenceVariant": "SK_SP_MP", + "ScanOptions": "IR", + "SequenceName": "_tfl3d1_16", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS3D", + "DIS2D" + ], + "SeriesNumber": 2, + "AcquisitionTime": "15:04:12.047500", + "AcquisitionNumber": 1, + "SliceThickness": 1, + "SAR": 0.0737571, + "EchoTime": 0.00372, + "RepetitionTime": 2, + "InversionTime": 1, + "FlipAngle": 9, + "PartialFourier": 1, + "BaseResolution": 320, + "ShimSetting": [ + -1265, + -11721, + 6208, + -36, + 147, + 0, + -47, + 20 + ], + "TxRefAmp": 282.099, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC1-7;NC1,2", + "CoilString": "HC1-7;NC1_2", + "PulseSequenceDetails": "%SiemensSeq%_tfl", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 81.25, + "PhaseEncodingSteps": 259, + "AcquisitionMatrixPE": 260, + "ReconMatrixPE": 320, + "PixelBandwidth": 150, + "DwellTime": 1.04e-05, + "ImageOrientationPatientDICOM": [ + 0, + 1, + 0, + 0, + 0, + -1 + ], + "InPlanePhaseEncodingDirectionDICOM": "ROW", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181125 (JP2:OpenJPEG) (JP-LS:CharLS) Clang8.1.0", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-geneva01/anat/sub-geneva01_space-other_T2star.json b/derivatives/data_preprocessed/sub-geneva01/anat/sub-geneva01_space-other_T2star.json index d35d8021d8..6c53ed2037 100644 --- a/derivatives/data_preprocessed/sub-geneva01/anat/sub-geneva01_space-other_T2star.json +++ b/derivatives/data_preprocessed/sub-geneva01/anat/sub-geneva01_space-other_T2star.json @@ -74,5 +74,9 @@ "InPlanePhaseEncodingDirectionDICOM": "COL", "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20181125 (JP2:OpenJPEG) (JP-LS:CharLS) Clang8.1.0", - "AcquisitionDuration": 285.0 + "AcquisitionDuration": 285.0, + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-geneva01/anat/sub-geneva01_space-other_T2w.json b/derivatives/data_preprocessed/sub-geneva01/anat/sub-geneva01_space-other_T2w.json index 5fa2264360..4265d6ad73 100644 --- a/derivatives/data_preprocessed/sub-geneva01/anat/sub-geneva01_space-other_T2w.json +++ b/derivatives/data_preprocessed/sub-geneva01/anat/sub-geneva01_space-other_T2w.json @@ -1,68 +1,81 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.257, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma", - "InstitutionName": "Fondation_Campus_Biotech_Geneva", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "Chemin_des_Mines_9_Geneve_District_CH_1211", - "DeviceSerialNumber": "66054", - "StationName": "AWP66054", - "BodyPartExamined": "SPINE", - "PatientPosition": "HFS", - "ProcedureStepDescription": "D.Van_de_Ville_Nawal", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "T2w", - "ProtocolName": "T2w", - "ScanningSequence": "SE", - "SequenceVariant": "SK_SP_OSP", - "ScanOptions": "PFP", - "SequenceName": "_spcR_100", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS3D", "DIS2D"], - "SeriesNumber": 3, - "AcquisitionTime": "15:09:34.020000", - "AcquisitionNumber": 1, - "SliceThickness": 0.8, - "SAR": 0.640741, - "EchoTime": 0.12, - "RepetitionTime": 1.5, - "FlipAngle": 120, - "PartialFourier": 1, - "BaseResolution": 320, - "ShimSetting": [ - -1265, - -11721, - 6208, - -36, - 147, - 0, - -47, - 20 ], - "TxRefAmp": 299.919, - "PhaseResolution": 1, - "PhaseOversampling": 0.8, - "ReceiveCoilName": "Spine_32", - "ReceiveCoilActiveElements": "HC5-7;NC1,2;SP1", - "CoilString": "HC5-7;NC1_2;SP1", - "PulseSequenceDetails": "%SiemensSeq%_tse_vfl", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 100, - "EchoTrainLength": 76, - "PhaseEncodingSteps": 422, - "AcquisitionMatrixPE": 320, - "ReconMatrixPE": 320, - "PixelBandwidth": 625, - "DwellTime": 2.5e-06, - "ImageOrientationPatientDICOM": [ - 9e-15, - 1, - 4.897e-12, - -0.0017453, - 4.897e-12, - -0.999998 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181125 (JP2:OpenJPEG) (JP-LS:CharLS) Clang8.1.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 123.257, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma", + "InstitutionName": "Fondation_Campus_Biotech_Geneva", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "Chemin_des_Mines_9_Geneve_District_CH_1211", + "DeviceSerialNumber": "66054", + "StationName": "AWP66054", + "BodyPartExamined": "SPINE", + "PatientPosition": "HFS", + "ProcedureStepDescription": "D.Van_de_Ville_Nawal", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "T2w", + "ProtocolName": "T2w", + "ScanningSequence": "SE", + "SequenceVariant": "SK_SP_OSP", + "ScanOptions": "PFP", + "SequenceName": "_spcR_100", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS3D", + "DIS2D" + ], + "SeriesNumber": 3, + "AcquisitionTime": "15:09:34.020000", + "AcquisitionNumber": 1, + "SliceThickness": 0.8, + "SAR": 0.640741, + "EchoTime": 0.12, + "RepetitionTime": 1.5, + "FlipAngle": 120, + "PartialFourier": 1, + "BaseResolution": 320, + "ShimSetting": [ + -1265, + -11721, + 6208, + -36, + 147, + 0, + -47, + 20 + ], + "TxRefAmp": 299.919, + "PhaseResolution": 1, + "PhaseOversampling": 0.8, + "ReceiveCoilName": "Spine_32", + "ReceiveCoilActiveElements": "HC5-7;NC1,2;SP1", + "CoilString": "HC5-7;NC1_2;SP1", + "PulseSequenceDetails": "%SiemensSeq%_tse_vfl", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "EchoTrainLength": 76, + "PhaseEncodingSteps": 422, + "AcquisitionMatrixPE": 320, + "ReconMatrixPE": 320, + "PixelBandwidth": 625, + "DwellTime": 2.5e-06, + "ImageOrientationPatientDICOM": [ + 9e-15, + 1, + 4.897e-12, + -0.0017453, + 4.897e-12, + -0.999998 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181125 (JP2:OpenJPEG) (JP-LS:CharLS) Clang8.1.0", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-geneva02/anat/sub-geneva02_flip-1_mt-on_space-other_MTS.json b/derivatives/data_preprocessed/sub-geneva02/anat/sub-geneva02_flip-1_mt-on_space-other_MTS.json index bfadd460b1..cfc8b719c7 100644 --- a/derivatives/data_preprocessed/sub-geneva02/anat/sub-geneva02_flip-1_mt-on_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-geneva02/anat/sub-geneva02_flip-1_mt-on_space-other_MTS.json @@ -1,66 +1,76 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.257, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma", - "InstitutionName": 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- "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC7;NC1,2;SP1", - "CoilString": "HC7;NC1_2;SP1", - "PulseSequenceDetails": "%SiemensSeq%_gre", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 100, - "PhaseEncodingSteps": 255, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 256, - "PixelBandwidth": 260, - "DwellTime": 7.5e-06, - "ImageOrientationPatientDICOM": [ - 1, - 0, - 0, - 0, - 0.994881, - 0.101056 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181125 (JP2:OpenJPEG) (JP-LS:CharLS) Clang8.1.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 123.257, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma", + "InstitutionName": "Fondation_Campus_Biotech_Geneva", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "Chemin_des_Mines_9_Geneve_District_CH_1211", + "DeviceSerialNumber": "66054", + "StationName": "AWP66054", + "BodyPartExamined": "SPINE", + "PatientPosition": "HFS", + "ProcedureStepDescription": "D.Van_de_Ville_Nawal", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-MT1", + "ProtocolName": "GRE-MT1", + "ScanningSequence": "GR", + "SequenceVariant": "MTC_SP", + "ScanOptions": "MT", + "SequenceName": "_fl3d1", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "DIS2D" + ], + "SeriesNumber": 5, + "AcquisitionTime": "13:30:13.932500", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SAR": 0.705264, + "EchoTime": 0.00313, + "RepetitionTime": 0.035, + "FlipAngle": 9, + "PartialFourier": 1, + "BaseResolution": 256, + "ShimSetting": [ + -1348, + -11835, + 6067, + -1878, + -201, + 2373, + -384, + -92 + ], + "TxRefAmp": 354.042, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC7;NC1,2;SP1", + "CoilString": "HC7;NC1_2;SP1", + "PulseSequenceDetails": "%SiemensSeq%_gre", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 255, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "PixelBandwidth": 260, + "DwellTime": 7.5e-06, + "ImageOrientationPatientDICOM": [ + 1, + 0, + 0, + 0, + 0.994881, + 0.101056 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181125 (JP2:OpenJPEG) (JP-LS:CharLS) Clang8.1.0", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-geneva02/anat/sub-geneva02_flip-2_mt-off_space-other_MTS.json b/derivatives/data_preprocessed/sub-geneva02/anat/sub-geneva02_flip-2_mt-off_space-other_MTS.json index ff10b624e2..75f6e683f5 100644 --- a/derivatives/data_preprocessed/sub-geneva02/anat/sub-geneva02_flip-2_mt-off_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-geneva02/anat/sub-geneva02_flip-2_mt-off_space-other_MTS.json @@ -1,65 +1,75 @@ { - 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"InstitutionalDepartmentName": "Department", + "InstitutionAddress": "Chemin_des_Mines_9_Geneve_District_CH_1211", + "DeviceSerialNumber": "66054", + "StationName": "AWP66054", + "BodyPartExamined": "SPINE", + "PatientPosition": "HFS", + "ProcedureStepDescription": "D.Van_de_Ville_Nawal", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-T1w", + "ProtocolName": "GRE-T1w", + "ScanningSequence": "GR", + "SequenceVariant": "SP", + "SequenceName": "_fl3d1", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "DIS2D" + ], + "SeriesNumber": 7, + "AcquisitionTime": "13:34:38.952500", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SAR": 0.0457272, + "EchoTime": 0.00313, + "RepetitionTime": 0.015, + "FlipAngle": 15, + "PartialFourier": 1, + "BaseResolution": 256, + "ShimSetting": [ + -1348, + -11835, + 6067, + -1878, + -201, + 2373, + -384, + -92 + ], + "TxRefAmp": 354.042, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC7;NC1,2;SP1", + "CoilString": "HC7;NC1_2;SP1", + "PulseSequenceDetails": "%SiemensSeq%_gre", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 255, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "PixelBandwidth": 260, + "DwellTime": 7.5e-06, + "ImageOrientationPatientDICOM": [ + 1, + 0, + 0, + 0, + 0.994881, + 0.101056 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181125 (JP2:OpenJPEG) (JP-LS:CharLS) Clang8.1.0", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-geneva02/anat/sub-geneva02_space-other_T1w.json b/derivatives/data_preprocessed/sub-geneva02/anat/sub-geneva02_space-other_T1w.json index 1de36c50eb..7d697cbf43 100644 --- a/derivatives/data_preprocessed/sub-geneva02/anat/sub-geneva02_space-other_T1w.json +++ b/derivatives/data_preprocessed/sub-geneva02/anat/sub-geneva02_space-other_T1w.json @@ -1,67 +1,80 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.257, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma", - "InstitutionName": "Fondation_Campus_Biotech_Geneva", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "Chemin_des_Mines_9_Geneve_District_CH_1211", - "DeviceSerialNumber": "66054", - "StationName": "AWP66054", - "BodyPartExamined": "SPINE", - "PatientPosition": "HFS", - "ProcedureStepDescription": "D.Van_de_Ville_Nawal", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "T1w", - "ProtocolName": "T1w", - "ScanningSequence": "GR_IR", - "SequenceVariant": "SK_SP_MP", - "ScanOptions": "IR", - "SequenceName": "_tfl3d1_16", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS3D", "DIS2D"], - "SeriesNumber": 2, - "AcquisitionTime": "13:17:15.155000", - "AcquisitionNumber": 1, - "SliceThickness": 1, - "SAR": 0.0692942, - "EchoTime": 0.00372, - "RepetitionTime": 2, - "InversionTime": 1, - "FlipAngle": 9, - "PartialFourier": 1, - "BaseResolution": 320, - "ShimSetting": [ - -1265, - -11721, - 6208, - -36, - 147, - 0, - -47, - 20 ], - "TxRefAmp": 302.284, - "PhaseResolution": 1, - "ReceiveCoilName": "Spine_32", - "ReceiveCoilActiveElements": "HC2-7;NC1,2;SP1", - "CoilString": "HC2-7;NC1_2;SP1", - "PulseSequenceDetails": "%SiemensSeq%_tfl", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 81.25, - "PhaseEncodingSteps": 259, - "AcquisitionMatrixPE": 260, - "ReconMatrixPE": 320, - "PixelBandwidth": 150, - "DwellTime": 1.04e-05, - "ImageOrientationPatientDICOM": [ - 0, - 1, - 0, - 0, - 0, - -1 ], - "InPlanePhaseEncodingDirectionDICOM": "ROW", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181125 (JP2:OpenJPEG) (JP-LS:CharLS) Clang8.1.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 123.257, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma", + "InstitutionName": "Fondation_Campus_Biotech_Geneva", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "Chemin_des_Mines_9_Geneve_District_CH_1211", + "DeviceSerialNumber": "66054", + "StationName": "AWP66054", + "BodyPartExamined": "SPINE", + "PatientPosition": "HFS", + "ProcedureStepDescription": "D.Van_de_Ville_Nawal", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "T1w", + "ProtocolName": "T1w", + "ScanningSequence": "GR_IR", + "SequenceVariant": "SK_SP_MP", + "ScanOptions": "IR", + "SequenceName": "_tfl3d1_16", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS3D", + "DIS2D" + ], + "SeriesNumber": 2, + "AcquisitionTime": "13:17:15.155000", + "AcquisitionNumber": 1, + "SliceThickness": 1, + "SAR": 0.0692942, + "EchoTime": 0.00372, + "RepetitionTime": 2, + "InversionTime": 1, + "FlipAngle": 9, + "PartialFourier": 1, + "BaseResolution": 320, + "ShimSetting": [ + -1265, + -11721, + 6208, + -36, + 147, + 0, + -47, + 20 + ], + "TxRefAmp": 302.284, + "PhaseResolution": 1, + "ReceiveCoilName": "Spine_32", + "ReceiveCoilActiveElements": "HC2-7;NC1,2;SP1", + "CoilString": "HC2-7;NC1_2;SP1", + "PulseSequenceDetails": "%SiemensSeq%_tfl", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 81.25, + "PhaseEncodingSteps": 259, + "AcquisitionMatrixPE": 260, + "ReconMatrixPE": 320, + "PixelBandwidth": 150, + "DwellTime": 1.04e-05, + "ImageOrientationPatientDICOM": [ + 0, + 1, + 0, + 0, + 0, + -1 + ], + "InPlanePhaseEncodingDirectionDICOM": "ROW", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181125 (JP2:OpenJPEG) (JP-LS:CharLS) Clang8.1.0", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-geneva02/anat/sub-geneva02_space-other_T2star.json b/derivatives/data_preprocessed/sub-geneva02/anat/sub-geneva02_space-other_T2star.json index aad6156753..14ded9dc7a 100644 --- a/derivatives/data_preprocessed/sub-geneva02/anat/sub-geneva02_space-other_T2star.json +++ b/derivatives/data_preprocessed/sub-geneva02/anat/sub-geneva02_space-other_T2star.json @@ -74,5 +74,9 @@ "InPlanePhaseEncodingDirectionDICOM": "COL", "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20181125 (JP2:OpenJPEG) (JP-LS:CharLS) Clang8.1.0", - "AcquisitionDuration": 285.0 + "AcquisitionDuration": 285.0, + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-geneva02/anat/sub-geneva02_space-other_T2w.json b/derivatives/data_preprocessed/sub-geneva02/anat/sub-geneva02_space-other_T2w.json index 25c9e7a69f..1b2881ed17 100644 --- a/derivatives/data_preprocessed/sub-geneva02/anat/sub-geneva02_space-other_T2w.json +++ b/derivatives/data_preprocessed/sub-geneva02/anat/sub-geneva02_space-other_T2w.json @@ -1,68 +1,81 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.257, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma", - "InstitutionName": "Fondation_Campus_Biotech_Geneva", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "Chemin_des_Mines_9_Geneve_District_CH_1211", - "DeviceSerialNumber": "66054", - "StationName": "AWP66054", - "BodyPartExamined": "SPINE", - "PatientPosition": "HFS", - "ProcedureStepDescription": "D.Van_de_Ville_Nawal", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "T2w", - "ProtocolName": "T2w", - "ScanningSequence": "SE", - "SequenceVariant": "SK_SP_OSP", - "ScanOptions": "PFP", - "SequenceName": "_spcR_100", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS3D", "DIS2D"], - 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"ConversionSoftwareVersion": "v1.0.20181125 (JP2:OpenJPEG) (JP-LS:CharLS) Clang8.1.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 123.257, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma", + "InstitutionName": "Fondation_Campus_Biotech_Geneva", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "Chemin_des_Mines_9_Geneve_District_CH_1211", + "DeviceSerialNumber": "66054", + "StationName": "AWP66054", + "BodyPartExamined": "SPINE", + "PatientPosition": "HFS", + "ProcedureStepDescription": "D.Van_de_Ville_Nawal", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "T2w", + "ProtocolName": "T2w", + "ScanningSequence": "SE", + "SequenceVariant": "SK_SP_OSP", + "ScanOptions": "PFP", + "SequenceName": "_spcR_100", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS3D", + "DIS2D" + ], + "SeriesNumber": 3, + "AcquisitionTime": "13:22:17.087500", + "AcquisitionNumber": 1, + 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"SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-geneva03/anat/sub-geneva03_flip-1_mt-on_space-other_MTS.json b/derivatives/data_preprocessed/sub-geneva03/anat/sub-geneva03_flip-1_mt-on_space-other_MTS.json index 6e4d24c425..5aecd65466 100644 --- a/derivatives/data_preprocessed/sub-geneva03/anat/sub-geneva03_flip-1_mt-on_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-geneva03/anat/sub-geneva03_flip-1_mt-on_space-other_MTS.json @@ -1,66 +1,76 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.257, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma", - "InstitutionName": "Fondation_Campus_Biotech_Geneva", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "Chemin_des_Mines_9_Geneve_District_CH_1211", - "DeviceSerialNumber": "66054", - "StationName": "AWP66054", - "BodyPartExamined": "SPINE", - "PatientPosition": "HFS", - "ProcedureStepDescription": "D.Van_de_Ville_Nawal", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-MT1", - "ProtocolName": "GRE-MT1", - "ScanningSequence": "GR", - "SequenceVariant": "MTC_SP", - "ScanOptions": "MT", - "SequenceName": "_fl3d1", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "DIS2D"], - "SeriesNumber": 5, - "AcquisitionTime": "11:26:55.940000", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SAR": 0.487254, - "EchoTime": 0.00313, - "RepetitionTime": 0.035, - "FlipAngle": 9, - "PartialFourier": 1, - "BaseResolution": 256, - "ShimSetting": [ - -1304, - -11846, - 6038, - -1013, - 130, - 2460, - -433, - 21 ], - "TxRefAmp": 279.923, - "PhaseResolution": 1, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC7;NC1,2", - "CoilString": "HC7;NC1_2", - "PulseSequenceDetails": "%SiemensSeq%_gre", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 100, - "PhaseEncodingSteps": 255, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 256, - "PixelBandwidth": 260, - "DwellTime": 7.5e-06, - "ImageOrientationPatientDICOM": [ - 1, - 0, - 0, - 0, - 0.988494, - 0.151261 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181125 (JP2:OpenJPEG) (JP-LS:CharLS) Clang8.1.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 123.257, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma", + "InstitutionName": "Fondation_Campus_Biotech_Geneva", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "Chemin_des_Mines_9_Geneve_District_CH_1211", + "DeviceSerialNumber": "66054", + "StationName": "AWP66054", + "BodyPartExamined": "SPINE", + "PatientPosition": "HFS", + "ProcedureStepDescription": "D.Van_de_Ville_Nawal", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-MT1", + "ProtocolName": "GRE-MT1", + "ScanningSequence": "GR", + "SequenceVariant": "MTC_SP", + "ScanOptions": "MT", + "SequenceName": "_fl3d1", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "DIS2D" + ], + "SeriesNumber": 5, + "AcquisitionTime": "11:26:55.940000", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SAR": 0.487254, + "EchoTime": 0.00313, + "RepetitionTime": 0.035, + "FlipAngle": 9, + "PartialFourier": 1, + "BaseResolution": 256, + "ShimSetting": [ + -1304, + -11846, + 6038, + -1013, + 130, + 2460, + -433, + 21 + ], + "TxRefAmp": 279.923, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC7;NC1,2", + "CoilString": "HC7;NC1_2", + "PulseSequenceDetails": "%SiemensSeq%_gre", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 255, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "PixelBandwidth": 260, + "DwellTime": 7.5e-06, + "ImageOrientationPatientDICOM": [ + 1, + 0, + 0, + 0, + 0.988494, + 0.151261 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181125 (JP2:OpenJPEG) (JP-LS:CharLS) Clang8.1.0", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-geneva03/anat/sub-geneva03_flip-2_mt-off_space-other_MTS.json b/derivatives/data_preprocessed/sub-geneva03/anat/sub-geneva03_flip-2_mt-off_space-other_MTS.json index 9ffcfd5477..d905a10848 100644 --- a/derivatives/data_preprocessed/sub-geneva03/anat/sub-geneva03_flip-2_mt-off_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-geneva03/anat/sub-geneva03_flip-2_mt-off_space-other_MTS.json @@ -1,65 +1,75 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.257, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma", - "InstitutionName": "Fondation_Campus_Biotech_Geneva", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "Chemin_des_Mines_9_Geneve_District_CH_1211", - "DeviceSerialNumber": "66054", - "StationName": "AWP66054", - "BodyPartExamined": "SPINE", - "PatientPosition": "HFS", - "ProcedureStepDescription": "D.Van_de_Ville_Nawal", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-T1w", - "ProtocolName": "GRE-T1w", - "ScanningSequence": "GR", - "SequenceVariant": "SP", - "SequenceName": "_fl3d1", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "DIS2D"], - "SeriesNumber": 7, - "AcquisitionTime": "11:31:20.930000", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SAR": 0.031592, - "EchoTime": 0.00313, - "RepetitionTime": 0.015, - "FlipAngle": 15, - "PartialFourier": 1, - "BaseResolution": 256, - "ShimSetting": [ - -1304, - -11846, - 6038, - -1013, - 130, - 2460, - -433, - 21 ], - "TxRefAmp": 279.923, - "PhaseResolution": 1, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC7;NC1,2", - "CoilString": "HC7;NC1_2", - "PulseSequenceDetails": "%SiemensSeq%_gre", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 100, - "PhaseEncodingSteps": 255, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 256, - "PixelBandwidth": 260, - "DwellTime": 7.5e-06, - "ImageOrientationPatientDICOM": [ - 1, - 0, - 0, - 0, - 0.988494, - 0.151261 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181125 (JP2:OpenJPEG) (JP-LS:CharLS) Clang8.1.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 123.257, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma", + "InstitutionName": "Fondation_Campus_Biotech_Geneva", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "Chemin_des_Mines_9_Geneve_District_CH_1211", + "DeviceSerialNumber": "66054", + "StationName": "AWP66054", + "BodyPartExamined": "SPINE", + "PatientPosition": "HFS", + "ProcedureStepDescription": "D.Van_de_Ville_Nawal", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-T1w", + "ProtocolName": "GRE-T1w", + "ScanningSequence": "GR", + "SequenceVariant": "SP", + "SequenceName": "_fl3d1", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "DIS2D" + ], + "SeriesNumber": 7, + "AcquisitionTime": "11:31:20.930000", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SAR": 0.031592, + "EchoTime": 0.00313, + "RepetitionTime": 0.015, + "FlipAngle": 15, + "PartialFourier": 1, + "BaseResolution": 256, + "ShimSetting": [ + -1304, + -11846, + 6038, + -1013, + 130, + 2460, + -433, + 21 + ], + "TxRefAmp": 279.923, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC7;NC1,2", + "CoilString": "HC7;NC1_2", + "PulseSequenceDetails": "%SiemensSeq%_gre", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 255, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "PixelBandwidth": 260, + "DwellTime": 7.5e-06, + "ImageOrientationPatientDICOM": [ + 1, + 0, + 0, + 0, + 0.988494, + 0.151261 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181125 (JP2:OpenJPEG) (JP-LS:CharLS) Clang8.1.0", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-geneva03/anat/sub-geneva03_space-other_T1w.json b/derivatives/data_preprocessed/sub-geneva03/anat/sub-geneva03_space-other_T1w.json index 6db23b17ee..f4dbc8c855 100644 --- a/derivatives/data_preprocessed/sub-geneva03/anat/sub-geneva03_space-other_T1w.json +++ b/derivatives/data_preprocessed/sub-geneva03/anat/sub-geneva03_space-other_T1w.json @@ -1,67 +1,80 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.257, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma", - "InstitutionName": "Fondation_Campus_Biotech_Geneva", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "Chemin_des_Mines_9_Geneve_District_CH_1211", - "DeviceSerialNumber": "66054", - "StationName": "AWP66054", - "BodyPartExamined": "SPINE", - "PatientPosition": "HFS", - "ProcedureStepDescription": "D.Van_de_Ville_Nawal", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "T1w", - "ProtocolName": "T1w", - "ScanningSequence": "GR_IR", - "SequenceVariant": "SK_SP_MP", - "ScanOptions": "IR", - "SequenceName": "_tfl3d1_16", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS3D", "DIS2D"], - "SeriesNumber": 2, - "AcquisitionTime": "11:13:28.695000", - "AcquisitionNumber": 1, - "SliceThickness": 1, - "SAR": 0.0524995, - "EchoTime": 0.00372, - "RepetitionTime": 2, - "InversionTime": 1, - "FlipAngle": 9, - "PartialFourier": 1, - "BaseResolution": 320, - "ShimSetting": [ - -1265, - -11721, - 6208, - -36, - 147, - 0, - -47, - 20 ], - "TxRefAmp": 255.653, - "PhaseResolution": 1, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC1,3-7;NC1,2;SP1", - "CoilString": "HC1_3-7;NC1_2;SP1", - "PulseSequenceDetails": "%SiemensSeq%_tfl", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 81.25, - "PhaseEncodingSteps": 259, - "AcquisitionMatrixPE": 260, - "ReconMatrixPE": 320, - "PixelBandwidth": 150, - "DwellTime": 1.04e-05, - "ImageOrientationPatientDICOM": [ - 0, - 1, - 0, - 0.026177, - 0, - -0.999657 ], - "InPlanePhaseEncodingDirectionDICOM": "ROW", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181125 (JP2:OpenJPEG) (JP-LS:CharLS) Clang8.1.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 123.257, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma", + "InstitutionName": "Fondation_Campus_Biotech_Geneva", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "Chemin_des_Mines_9_Geneve_District_CH_1211", + "DeviceSerialNumber": "66054", + "StationName": "AWP66054", + "BodyPartExamined": "SPINE", + "PatientPosition": "HFS", + "ProcedureStepDescription": "D.Van_de_Ville_Nawal", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "T1w", + "ProtocolName": "T1w", + "ScanningSequence": "GR_IR", + "SequenceVariant": "SK_SP_MP", + "ScanOptions": "IR", + "SequenceName": "_tfl3d1_16", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS3D", + "DIS2D" + ], + "SeriesNumber": 2, + "AcquisitionTime": "11:13:28.695000", + "AcquisitionNumber": 1, + "SliceThickness": 1, + "SAR": 0.0524995, + "EchoTime": 0.00372, + "RepetitionTime": 2, + "InversionTime": 1, + "FlipAngle": 9, + "PartialFourier": 1, + "BaseResolution": 320, + "ShimSetting": [ + -1265, + -11721, + 6208, + -36, + 147, + 0, + -47, + 20 + ], + "TxRefAmp": 255.653, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC1,3-7;NC1,2;SP1", + "CoilString": "HC1_3-7;NC1_2;SP1", + "PulseSequenceDetails": "%SiemensSeq%_tfl", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 81.25, + "PhaseEncodingSteps": 259, + "AcquisitionMatrixPE": 260, + "ReconMatrixPE": 320, + "PixelBandwidth": 150, + "DwellTime": 1.04e-05, + "ImageOrientationPatientDICOM": [ + 0, + 1, + 0, + 0.026177, + 0, + -0.999657 + ], + "InPlanePhaseEncodingDirectionDICOM": "ROW", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181125 (JP2:OpenJPEG) (JP-LS:CharLS) Clang8.1.0", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-geneva03/anat/sub-geneva03_space-other_T2star.json b/derivatives/data_preprocessed/sub-geneva03/anat/sub-geneva03_space-other_T2star.json index b6905e3ede..52a5b67081 100644 --- a/derivatives/data_preprocessed/sub-geneva03/anat/sub-geneva03_space-other_T2star.json +++ b/derivatives/data_preprocessed/sub-geneva03/anat/sub-geneva03_space-other_T2star.json @@ -74,5 +74,9 @@ "InPlanePhaseEncodingDirectionDICOM": "COL", "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20181125 (JP2:OpenJPEG) (JP-LS:CharLS) Clang8.1.0", - "AcquisitionDuration": 285.0 + "AcquisitionDuration": 285.0, + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-geneva03/anat/sub-geneva03_space-other_T2w.json b/derivatives/data_preprocessed/sub-geneva03/anat/sub-geneva03_space-other_T2w.json index a1ae245204..4cd62750b0 100644 --- a/derivatives/data_preprocessed/sub-geneva03/anat/sub-geneva03_space-other_T2w.json +++ b/derivatives/data_preprocessed/sub-geneva03/anat/sub-geneva03_space-other_T2w.json @@ -1,68 +1,81 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.257, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma", - "InstitutionName": "Fondation_Campus_Biotech_Geneva", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "Chemin_des_Mines_9_Geneve_District_CH_1211", - "DeviceSerialNumber": "66054", - "StationName": "AWP66054", - "BodyPartExamined": "SPINE", - "PatientPosition": "HFS", - "ProcedureStepDescription": "D.Van_de_Ville_Nawal", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "T2w", - "ProtocolName": "T2w", - "ScanningSequence": "SE", - "SequenceVariant": "SK_SP_OSP", - "ScanOptions": "PFP", - "SequenceName": "_spcR_100", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS3D", "DIS2D"], - "SeriesNumber": 3, - "AcquisitionTime": "11:18:36.685000", - "AcquisitionNumber": 1, - "SliceThickness": 0.8, - "SAR": 0.46146, - "EchoTime": 0.12, - "RepetitionTime": 1.5, - "FlipAngle": 120, - "PartialFourier": 1, - "BaseResolution": 320, - "ShimSetting": [ - -1265, - -11721, - 6208, - 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"InstitutionalDepartmentName": "Department", + "InstitutionAddress": "Chemin_des_Mines_9_Geneve_District_CH_1211", + "DeviceSerialNumber": "66054", + "StationName": "AWP66054", + "BodyPartExamined": "SPINE", + "PatientPosition": "HFS", + "ProcedureStepDescription": "D.Van_de_Ville_Nawal", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "T2w", + "ProtocolName": "T2w", + "ScanningSequence": "SE", + "SequenceVariant": "SK_SP_OSP", + "ScanOptions": "PFP", + "SequenceName": "_spcR_100", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS3D", + "DIS2D" + ], + "SeriesNumber": 3, + "AcquisitionTime": "11:18:36.685000", + "AcquisitionNumber": 1, + "SliceThickness": 0.8, + "SAR": 0.46146, + "EchoTime": 0.12, + "RepetitionTime": 1.5, + "FlipAngle": 120, + "PartialFourier": 1, + "BaseResolution": 320, + "ShimSetting": [ + -1265, + -11721, + 6208, + -36, + 147, + 0, + -47, + 20 + ], + "TxRefAmp": 271.392, + "PhaseResolution": 1, + "PhaseOversampling": 0.8, + "ReceiveCoilName": "Spine_32", + "ReceiveCoilActiveElements": "HC5-7;NC1,2;SP1", + "CoilString": "HC5-7;NC1_2;SP1", + "PulseSequenceDetails": "%SiemensSeq%_tse_vfl", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "EchoTrainLength": 76, + "PhaseEncodingSteps": 422, + "AcquisitionMatrixPE": 320, + "ReconMatrixPE": 320, + "PixelBandwidth": 625, + "DwellTime": 2.5e-06, + "ImageOrientationPatientDICOM": [ + -1.28e-13, + 1, + 4.895e-12, + 0.0261769, + 4.897e-12, + -0.999657 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181125 (JP2:OpenJPEG) (JP-LS:CharLS) Clang8.1.0", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-geneva04/anat/sub-geneva04_flip-1_mt-on_space-other_MTS.json b/derivatives/data_preprocessed/sub-geneva04/anat/sub-geneva04_flip-1_mt-on_space-other_MTS.json index 02296ee6ec..40ece8ef76 100644 --- a/derivatives/data_preprocessed/sub-geneva04/anat/sub-geneva04_flip-1_mt-on_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-geneva04/anat/sub-geneva04_flip-1_mt-on_space-other_MTS.json @@ -1,66 +1,76 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.257, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma", - "InstitutionName": "Fondation_Campus_Biotech_Geneva", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "Chemin_des_Mines_9_Geneve_District_CH_1211", - "DeviceSerialNumber": "66054", - "StationName": "AWP66054", - "BodyPartExamined": "SPINE", - "PatientPosition": "HFS", - "ProcedureStepDescription": "D.Van_de_Ville_Nawal", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-MT1", - "ProtocolName": "GRE-MT1", - "ScanningSequence": "GR", - "SequenceVariant": "MTC_SP", - "ScanOptions": "MT", - "SequenceName": "_fl3d1", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "DIS2D"], - "SeriesNumber": 14, - "AcquisitionTime": "17:10:43.007500", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SAR": 0.67579, - "EchoTime": 0.00313, - "RepetitionTime": 0.035, - "FlipAngle": 9, - "PartialFourier": 1, - "BaseResolution": 256, - "ShimSetting": [ - -1278, - -11921, - 6060, - -704, - 89, - 2891, - 71, - 82 ], - "TxRefAmp": 265.616, - "PhaseResolution": 1, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC5-7;NC1,2;SP1", - "CoilString": "HC5-7;NC1_2;SP1", - "PulseSequenceDetails": "%SiemensSeq%_gre", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 100, - "PhaseEncodingSteps": 255, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 256, - "PixelBandwidth": 260, - "DwellTime": 7.5e-06, - "ImageOrientationPatientDICOM": [ - 1, - 0, - 0, - 0, - 0.926529, - 0.376224 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181125 (JP2:OpenJPEG) (JP-LS:CharLS) Clang8.1.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 123.257, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma", + "InstitutionName": "Fondation_Campus_Biotech_Geneva", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "Chemin_des_Mines_9_Geneve_District_CH_1211", + "DeviceSerialNumber": "66054", + "StationName": "AWP66054", + "BodyPartExamined": "SPINE", + "PatientPosition": "HFS", + "ProcedureStepDescription": "D.Van_de_Ville_Nawal", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-MT1", + "ProtocolName": "GRE-MT1", + "ScanningSequence": "GR", + "SequenceVariant": "MTC_SP", + "ScanOptions": "MT", + "SequenceName": "_fl3d1", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "DIS2D" + ], + "SeriesNumber": 14, + "AcquisitionTime": "17:10:43.007500", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SAR": 0.67579, + "EchoTime": 0.00313, + "RepetitionTime": 0.035, + "FlipAngle": 9, + "PartialFourier": 1, + "BaseResolution": 256, + "ShimSetting": [ + -1278, + -11921, + 6060, + -704, + 89, + 2891, + 71, + 82 + ], + "TxRefAmp": 265.616, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC5-7;NC1,2;SP1", + "CoilString": "HC5-7;NC1_2;SP1", + "PulseSequenceDetails": "%SiemensSeq%_gre", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 255, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "PixelBandwidth": 260, + "DwellTime": 7.5e-06, + "ImageOrientationPatientDICOM": [ + 1, + 0, + 0, + 0, + 0.926529, + 0.376224 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181125 (JP2:OpenJPEG) (JP-LS:CharLS) Clang8.1.0", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-geneva04/anat/sub-geneva04_flip-2_mt-off_space-other_MTS.json b/derivatives/data_preprocessed/sub-geneva04/anat/sub-geneva04_flip-2_mt-off_space-other_MTS.json index 900d0d89ef..ab2c0294b2 100644 --- a/derivatives/data_preprocessed/sub-geneva04/anat/sub-geneva04_flip-2_mt-off_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-geneva04/anat/sub-geneva04_flip-2_mt-off_space-other_MTS.json @@ -1,65 +1,75 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.257, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma", - "InstitutionName": "Fondation_Campus_Biotech_Geneva", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "Chemin_des_Mines_9_Geneve_District_CH_1211", - "DeviceSerialNumber": "66054", - "StationName": "AWP66054", - "BodyPartExamined": "SPINE", - "PatientPosition": "HFS", - "ProcedureStepDescription": "D.Van_de_Ville_Nawal", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-T1w", - "ProtocolName": "GRE-T1w", - "ScanningSequence": "GR", - "SequenceVariant": "SP", - "SequenceName": "_fl3d1", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "DIS2D"], - "SeriesNumber": 16, - "AcquisitionTime": "17:15:8.977500", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SAR": 0.0438161, - "EchoTime": 0.00313, - "RepetitionTime": 0.015, - "FlipAngle": 15, - "PartialFourier": 1, - "BaseResolution": 256, - "ShimSetting": [ - -1278, - -11921, - 6060, - -704, - 89, - 2891, - 71, - 82 ], - "TxRefAmp": 265.616, - "PhaseResolution": 1, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC5-7;NC1,2;SP1", - "CoilString": "HC5-7;NC1_2;SP1", - "PulseSequenceDetails": "%SiemensSeq%_gre", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 100, - "PhaseEncodingSteps": 255, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 256, - "PixelBandwidth": 260, - "DwellTime": 7.5e-06, - "ImageOrientationPatientDICOM": [ - 1, - 0, - 0, - 0, - 0.926529, - 0.376224 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181125 (JP2:OpenJPEG) (JP-LS:CharLS) Clang8.1.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 123.257, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma", + "InstitutionName": "Fondation_Campus_Biotech_Geneva", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "Chemin_des_Mines_9_Geneve_District_CH_1211", + "DeviceSerialNumber": "66054", + "StationName": "AWP66054", + "BodyPartExamined": "SPINE", + "PatientPosition": "HFS", + "ProcedureStepDescription": "D.Van_de_Ville_Nawal", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-T1w", + "ProtocolName": "GRE-T1w", + "ScanningSequence": "GR", + "SequenceVariant": "SP", + "SequenceName": "_fl3d1", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "DIS2D" + ], + "SeriesNumber": 16, + "AcquisitionTime": "17:15:8.977500", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SAR": 0.0438161, + "EchoTime": 0.00313, + "RepetitionTime": 0.015, + "FlipAngle": 15, + "PartialFourier": 1, + "BaseResolution": 256, + "ShimSetting": [ + -1278, + -11921, + 6060, + -704, + 89, + 2891, + 71, + 82 + ], + "TxRefAmp": 265.616, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC5-7;NC1,2;SP1", + "CoilString": "HC5-7;NC1_2;SP1", + "PulseSequenceDetails": "%SiemensSeq%_gre", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 255, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "PixelBandwidth": 260, + "DwellTime": 7.5e-06, + "ImageOrientationPatientDICOM": [ + 1, + 0, + 0, + 0, + 0.926529, + 0.376224 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181125 (JP2:OpenJPEG) (JP-LS:CharLS) Clang8.1.0", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-geneva04/anat/sub-geneva04_space-other_T1w.json b/derivatives/data_preprocessed/sub-geneva04/anat/sub-geneva04_space-other_T1w.json index 6e301a2d54..31a5ce815d 100644 --- a/derivatives/data_preprocessed/sub-geneva04/anat/sub-geneva04_space-other_T1w.json +++ b/derivatives/data_preprocessed/sub-geneva04/anat/sub-geneva04_space-other_T1w.json @@ -1,67 +1,80 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.257, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma", - "InstitutionName": "Fondation_Campus_Biotech_Geneva", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "Chemin_des_Mines_9_Geneve_District_CH_1211", - "DeviceSerialNumber": "66054", - "StationName": "AWP66054", - "BodyPartExamined": "SPINE", - "PatientPosition": "HFS", - "ProcedureStepDescription": "D.Van_de_Ville_Nawal", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "T1w", - "ProtocolName": "T1w", - "ScanningSequence": "GR_IR", - "SequenceVariant": "SK_SP_MP", - "ScanOptions": "IR", - "SequenceName": "_tfl3d1_16", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS3D", "DIS2D"], - "SeriesNumber": 11, - "AcquisitionTime": "16:57:32.027500", - "AcquisitionNumber": 1, - "SliceThickness": 1, - "SAR": 0.0736135, - "EchoTime": 0.00372, - "RepetitionTime": 2, - "InversionTime": 1, - "FlipAngle": 9, - "PartialFourier": 1, - "BaseResolution": 320, - "ShimSetting": [ - -1265, - -11721, - 6208, - -36, - 147, - 0, - -47, - 20 ], - "TxRefAmp": 246.888, - "PhaseResolution": 1, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC1-7;NC1,2", - "CoilString": "HC1-7;NC1_2", - "PulseSequenceDetails": "%SiemensSeq%_tfl", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 81.25, - "PhaseEncodingSteps": 259, - "AcquisitionMatrixPE": 260, - "ReconMatrixPE": 320, - "PixelBandwidth": 150, - "DwellTime": 1.04e-05, - "ImageOrientationPatientDICOM": [ - 0, - 1, - 0, - -0.0104717, - 0, - -0.999945 ], - "InPlanePhaseEncodingDirectionDICOM": "ROW", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181125 (JP2:OpenJPEG) (JP-LS:CharLS) Clang8.1.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 123.257, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma", + "InstitutionName": "Fondation_Campus_Biotech_Geneva", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "Chemin_des_Mines_9_Geneve_District_CH_1211", + "DeviceSerialNumber": "66054", + "StationName": "AWP66054", + "BodyPartExamined": "SPINE", + "PatientPosition": "HFS", + "ProcedureStepDescription": "D.Van_de_Ville_Nawal", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "T1w", + "ProtocolName": "T1w", + "ScanningSequence": "GR_IR", + "SequenceVariant": "SK_SP_MP", + "ScanOptions": "IR", + "SequenceName": "_tfl3d1_16", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS3D", + "DIS2D" + ], + "SeriesNumber": 11, + "AcquisitionTime": "16:57:32.027500", + "AcquisitionNumber": 1, + "SliceThickness": 1, + "SAR": 0.0736135, + "EchoTime": 0.00372, + "RepetitionTime": 2, + "InversionTime": 1, + "FlipAngle": 9, + "PartialFourier": 1, + "BaseResolution": 320, + "ShimSetting": [ + -1265, + -11721, + 6208, + -36, + 147, + 0, + -47, + 20 + ], + "TxRefAmp": 246.888, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC1-7;NC1,2", + "CoilString": "HC1-7;NC1_2", + "PulseSequenceDetails": "%SiemensSeq%_tfl", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 81.25, + "PhaseEncodingSteps": 259, + "AcquisitionMatrixPE": 260, + "ReconMatrixPE": 320, + "PixelBandwidth": 150, + "DwellTime": 1.04e-05, + "ImageOrientationPatientDICOM": [ + 0, + 1, + 0, + -0.0104717, + 0, + -0.999945 + ], + "InPlanePhaseEncodingDirectionDICOM": "ROW", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181125 (JP2:OpenJPEG) (JP-LS:CharLS) Clang8.1.0", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-geneva04/anat/sub-geneva04_space-other_T2star.json b/derivatives/data_preprocessed/sub-geneva04/anat/sub-geneva04_space-other_T2star.json index 2ce745fb16..e3852b04cd 100644 --- a/derivatives/data_preprocessed/sub-geneva04/anat/sub-geneva04_space-other_T2star.json +++ b/derivatives/data_preprocessed/sub-geneva04/anat/sub-geneva04_space-other_T2star.json @@ -74,5 +74,9 @@ "InPlanePhaseEncodingDirectionDICOM": "COL", "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20181125 (JP2:OpenJPEG) (JP-LS:CharLS) Clang8.1.0", - "AcquisitionDuration": 285.0 + "AcquisitionDuration": 285.0, + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-geneva04/anat/sub-geneva04_space-other_T2w.json b/derivatives/data_preprocessed/sub-geneva04/anat/sub-geneva04_space-other_T2w.json index acdec2a778..dfb39bec74 100644 --- a/derivatives/data_preprocessed/sub-geneva04/anat/sub-geneva04_space-other_T2w.json +++ b/derivatives/data_preprocessed/sub-geneva04/anat/sub-geneva04_space-other_T2w.json @@ -1,68 +1,81 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.257, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma", - "InstitutionName": "Fondation_Campus_Biotech_Geneva", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "Chemin_des_Mines_9_Geneve_District_CH_1211", - "DeviceSerialNumber": "66054", - "StationName": "AWP66054", - "BodyPartExamined": "SPINE", - "PatientPosition": "HFS", - "ProcedureStepDescription": "D.Van_de_Ville_Nawal", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "T2w", - "ProtocolName": "T2w", - "ScanningSequence": "SE", - "SequenceVariant": "SK_SP_OSP", - "ScanOptions": "PFP", - "SequenceName": "_spcR_100", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS3D", "DIS2D"], - "SeriesNumber": 12, - "AcquisitionTime": "17:02:33.110000", - "AcquisitionNumber": 1, - "SliceThickness": 0.8, - "SAR": 0.683266, - "EchoTime": 0.12, - "RepetitionTime": 1.5, - "FlipAngle": 120, - "PartialFourier": 1, - "BaseResolution": 320, - "ShimSetting": [ - -1265, - -11721, - 6208, - -36, - 147, - 0, - -47, - 20 ], - "TxRefAmp": 265.616, - "PhaseResolution": 1, - "PhaseOversampling": 0.8, - "ReceiveCoilName": "Spine_32", - "ReceiveCoilActiveElements": "HC5-7;NC1,2;SP1", - "CoilString": "HC5-7;NC1_2;SP1", - "PulseSequenceDetails": "%SiemensSeq%_tse_vfl", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 100, - "EchoTrainLength": 76, - "PhaseEncodingSteps": 422, - "AcquisitionMatrixPE": 320, - "ReconMatrixPE": 320, - "PixelBandwidth": 625, - "DwellTime": 2.5e-06, - "ImageOrientationPatientDICOM": [ - 1.11e-13, - 1, - 4.895e-12, - -0.0226874, - 4.897e-12, - -0.999743 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181125 (JP2:OpenJPEG) (JP-LS:CharLS) Clang8.1.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 123.257, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma", + "InstitutionName": "Fondation_Campus_Biotech_Geneva", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "Chemin_des_Mines_9_Geneve_District_CH_1211", + "DeviceSerialNumber": "66054", + "StationName": "AWP66054", + "BodyPartExamined": "SPINE", + "PatientPosition": "HFS", + "ProcedureStepDescription": "D.Van_de_Ville_Nawal", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "T2w", + "ProtocolName": "T2w", + "ScanningSequence": "SE", + "SequenceVariant": "SK_SP_OSP", + "ScanOptions": "PFP", + "SequenceName": "_spcR_100", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS3D", + "DIS2D" + ], + "SeriesNumber": 12, + "AcquisitionTime": "17:02:33.110000", + "AcquisitionNumber": 1, + "SliceThickness": 0.8, + "SAR": 0.683266, + "EchoTime": 0.12, + "RepetitionTime": 1.5, + "FlipAngle": 120, + "PartialFourier": 1, + "BaseResolution": 320, + "ShimSetting": [ + -1265, + -11721, + 6208, + -36, + 147, + 0, + -47, + 20 + ], + "TxRefAmp": 265.616, + "PhaseResolution": 1, + "PhaseOversampling": 0.8, + "ReceiveCoilName": "Spine_32", + "ReceiveCoilActiveElements": "HC5-7;NC1,2;SP1", + "CoilString": "HC5-7;NC1_2;SP1", + "PulseSequenceDetails": "%SiemensSeq%_tse_vfl", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "EchoTrainLength": 76, + "PhaseEncodingSteps": 422, + "AcquisitionMatrixPE": 320, + "ReconMatrixPE": 320, + "PixelBandwidth": 625, + "DwellTime": 2.5e-06, + "ImageOrientationPatientDICOM": [ + 1.11e-13, + 1, + 4.895e-12, + -0.0226874, + 4.897e-12, + -0.999743 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181125 (JP2:OpenJPEG) (JP-LS:CharLS) Clang8.1.0", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-geneva05/anat/sub-geneva05_flip-1_mt-on_space-other_MTS.json b/derivatives/data_preprocessed/sub-geneva05/anat/sub-geneva05_flip-1_mt-on_space-other_MTS.json index cb5033b7dc..4eba675c98 100644 --- a/derivatives/data_preprocessed/sub-geneva05/anat/sub-geneva05_flip-1_mt-on_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-geneva05/anat/sub-geneva05_flip-1_mt-on_space-other_MTS.json @@ -1,66 +1,76 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.257, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma", - "InstitutionName": "Fondation_Campus_Biotech_Geneva", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "Chemin_des_Mines_9_Geneve_District_CH_1211", - "DeviceSerialNumber": "66054", - "StationName": "AWP66054", - "BodyPartExamined": "SPINE", - "PatientPosition": "HFS", - "ProcedureStepDescription": "D.Van_de_Ville_Nawal", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-MT1", - "ProtocolName": "GRE-MT1", - "ScanningSequence": "GR", - "SequenceVariant": "MTC_SP", - "ScanOptions": "MT", - "SequenceName": "_fl3d1", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "DIS2D"], - "SeriesNumber": 14, - "AcquisitionTime": "15:38:32.960000", - "AcquisitionNumber": 1, - 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3, + "ImagingFrequency": 123.257, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma", + "InstitutionName": "Fondation_Campus_Biotech_Geneva", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "Chemin_des_Mines_9_Geneve_District_CH_1211", + "DeviceSerialNumber": "66054", + "StationName": "AWP66054", + "BodyPartExamined": "SPINE", + "PatientPosition": "HFS", + "ProcedureStepDescription": "D.Van_de_Ville_Nawal", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-MT1", + "ProtocolName": "GRE-MT1", + "ScanningSequence": "GR", + "SequenceVariant": "MTC_SP", + "ScanOptions": "MT", + "SequenceName": "_fl3d1", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "DIS2D" + ], + "SeriesNumber": 14, + "AcquisitionTime": "15:38:32.960000", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SAR": 0.588559, + "EchoTime": 0.00313, + "RepetitionTime": 0.035, + "FlipAngle": 9, + "PartialFourier": 1, + "BaseResolution": 256, + "ShimSetting": [ + -1279, + -11930, + 6267, + -985, + 45, + 2586, + -158, + 89 + ], + "TxRefAmp": 263.682, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC5-7;NC1,2;SP1", + "CoilString": "HC5-7;NC1_2;SP1", + "PulseSequenceDetails": "%SiemensSeq%_gre", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 255, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "PixelBandwidth": 260, + "DwellTime": 7.5e-06, + "ImageOrientationPatientDICOM": [ + 0.999252, + 0.0103425, + -0.0372636, + -3.16686e-08, + 0.963575, + 0.267438 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181125 (JP2:OpenJPEG) (JP-LS:CharLS) Clang8.1.0", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-geneva05/anat/sub-geneva05_flip-2_mt-off_space-other_MTS.json b/derivatives/data_preprocessed/sub-geneva05/anat/sub-geneva05_flip-2_mt-off_space-other_MTS.json index 2938fb93a6..055828ae32 100644 --- a/derivatives/data_preprocessed/sub-geneva05/anat/sub-geneva05_flip-2_mt-off_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-geneva05/anat/sub-geneva05_flip-2_mt-off_space-other_MTS.json @@ -1,65 +1,75 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.257, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma", - "InstitutionName": "Fondation_Campus_Biotech_Geneva", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "Chemin_des_Mines_9_Geneve_District_CH_1211", - "DeviceSerialNumber": "66054", - "StationName": "AWP66054", - "BodyPartExamined": "SPINE", - "PatientPosition": "HFS", - "ProcedureStepDescription": "D.Van_de_Ville_Nawal", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-T1w", - "ProtocolName": "GRE-T1w", - "ScanningSequence": "GR", - "SequenceVariant": "SP", - "SequenceName": "_fl3d1", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "DIS2D"], - "SeriesNumber": 16, - "AcquisitionTime": "15:42:58.955000", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SAR": 0.0381603, - "EchoTime": 0.00313, - "RepetitionTime": 0.015, - "FlipAngle": 15, - "PartialFourier": 1, - "BaseResolution": 256, - "ShimSetting": [ - -1279, - -11930, - 6267, - -985, - 45, - 2586, - -158, - 89 ], - "TxRefAmp": 263.682, - "PhaseResolution": 1, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC5-7;NC1,2;SP1", - "CoilString": "HC5-7;NC1_2;SP1", - "PulseSequenceDetails": "%SiemensSeq%_gre", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 100, - "PhaseEncodingSteps": 255, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 256, - "PixelBandwidth": 260, - "DwellTime": 7.5e-06, - "ImageOrientationPatientDICOM": [ - 0.999252, - 0.0103425, - -0.0372636, - -3.16686e-08, - 0.963575, - 0.267438 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181125 (JP2:OpenJPEG) (JP-LS:CharLS) Clang8.1.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 123.257, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma", + "InstitutionName": "Fondation_Campus_Biotech_Geneva", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "Chemin_des_Mines_9_Geneve_District_CH_1211", + "DeviceSerialNumber": "66054", + "StationName": "AWP66054", + "BodyPartExamined": "SPINE", + "PatientPosition": "HFS", + "ProcedureStepDescription": "D.Van_de_Ville_Nawal", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-T1w", + "ProtocolName": "GRE-T1w", + "ScanningSequence": "GR", + "SequenceVariant": "SP", + "SequenceName": "_fl3d1", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "DIS2D" + ], + "SeriesNumber": 16, + "AcquisitionTime": "15:42:58.955000", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SAR": 0.0381603, + "EchoTime": 0.00313, + "RepetitionTime": 0.015, + "FlipAngle": 15, + "PartialFourier": 1, + "BaseResolution": 256, + "ShimSetting": [ + -1279, + -11930, + 6267, + -985, + 45, + 2586, + -158, + 89 + ], + "TxRefAmp": 263.682, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC5-7;NC1,2;SP1", + "CoilString": "HC5-7;NC1_2;SP1", + "PulseSequenceDetails": "%SiemensSeq%_gre", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 255, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "PixelBandwidth": 260, + "DwellTime": 7.5e-06, + "ImageOrientationPatientDICOM": [ + 0.999252, + 0.0103425, + -0.0372636, + -3.16686e-08, + 0.963575, + 0.267438 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181125 (JP2:OpenJPEG) (JP-LS:CharLS) Clang8.1.0", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-geneva05/anat/sub-geneva05_space-other_T1w.json b/derivatives/data_preprocessed/sub-geneva05/anat/sub-geneva05_space-other_T1w.json index b374455d38..60ae05e765 100644 --- a/derivatives/data_preprocessed/sub-geneva05/anat/sub-geneva05_space-other_T1w.json +++ b/derivatives/data_preprocessed/sub-geneva05/anat/sub-geneva05_space-other_T1w.json @@ -1,67 +1,80 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.257, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma", - "InstitutionName": "Fondation_Campus_Biotech_Geneva", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "Chemin_des_Mines_9_Geneve_District_CH_1211", - "DeviceSerialNumber": "66054", - "StationName": "AWP66054", - "BodyPartExamined": "SPINE", - "PatientPosition": "HFS", - "ProcedureStepDescription": "D.Van_de_Ville_Nawal", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "T1w", - "ProtocolName": "T1w", - "ScanningSequence": "GR_IR", - "SequenceVariant": "SK_SP_MP", - "ScanOptions": "IR", - "SequenceName": "_tfl3d1_16", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS3D", "DIS2D"], - "SeriesNumber": 11, - "AcquisitionTime": "15:25:33.052500", - "AcquisitionNumber": 1, - "SliceThickness": 1, - "SAR": 0.0737708, - "EchoTime": 0.00372, - "RepetitionTime": 2, - "InversionTime": 1, - "FlipAngle": 9, - "PartialFourier": 1, - "BaseResolution": 320, - "ShimSetting": [ - -1265, - -11721, - 6208, - -36, - 147, - 0, - -47, - 20 ], - "TxRefAmp": 258.427, - "PhaseResolution": 1, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC1,3-7;NC1,2;SP1", - "CoilString": "HC1_3-7;NC1_2;SP1", - "PulseSequenceDetails": "%SiemensSeq%_tfl", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 81.25, - "PhaseEncodingSteps": 259, - "AcquisitionMatrixPE": 260, - "ReconMatrixPE": 320, - "PixelBandwidth": 150, - "DwellTime": 1.04e-05, - "ImageOrientationPatientDICOM": [ - 0, - 1, - 0, - -0.0191974, - 0, - -0.999816 ], - "InPlanePhaseEncodingDirectionDICOM": "ROW", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181125 (JP2:OpenJPEG) (JP-LS:CharLS) Clang8.1.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 123.257, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma", + "InstitutionName": "Fondation_Campus_Biotech_Geneva", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "Chemin_des_Mines_9_Geneve_District_CH_1211", + "DeviceSerialNumber": "66054", + "StationName": "AWP66054", + "BodyPartExamined": "SPINE", + "PatientPosition": "HFS", + "ProcedureStepDescription": "D.Van_de_Ville_Nawal", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "T1w", + "ProtocolName": "T1w", + "ScanningSequence": "GR_IR", + "SequenceVariant": "SK_SP_MP", + "ScanOptions": "IR", + "SequenceName": "_tfl3d1_16", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS3D", + "DIS2D" + ], + "SeriesNumber": 11, + "AcquisitionTime": "15:25:33.052500", + "AcquisitionNumber": 1, + "SliceThickness": 1, + "SAR": 0.0737708, + "EchoTime": 0.00372, + "RepetitionTime": 2, + "InversionTime": 1, + "FlipAngle": 9, + "PartialFourier": 1, + "BaseResolution": 320, + "ShimSetting": [ + -1265, + -11721, + 6208, + -36, + 147, + 0, + -47, + 20 + ], + "TxRefAmp": 258.427, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC1,3-7;NC1,2;SP1", + "CoilString": "HC1_3-7;NC1_2;SP1", + "PulseSequenceDetails": "%SiemensSeq%_tfl", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 81.25, + "PhaseEncodingSteps": 259, + "AcquisitionMatrixPE": 260, + "ReconMatrixPE": 320, + "PixelBandwidth": 150, + "DwellTime": 1.04e-05, + "ImageOrientationPatientDICOM": [ + 0, + 1, + 0, + -0.0191974, + 0, + -0.999816 + ], + "InPlanePhaseEncodingDirectionDICOM": "ROW", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181125 (JP2:OpenJPEG) (JP-LS:CharLS) Clang8.1.0", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-geneva05/anat/sub-geneva05_space-other_T2star.json b/derivatives/data_preprocessed/sub-geneva05/anat/sub-geneva05_space-other_T2star.json index 97754c2cd3..2163259c9c 100644 --- a/derivatives/data_preprocessed/sub-geneva05/anat/sub-geneva05_space-other_T2star.json +++ b/derivatives/data_preprocessed/sub-geneva05/anat/sub-geneva05_space-other_T2star.json @@ -74,5 +74,9 @@ "InPlanePhaseEncodingDirectionDICOM": "COL", "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20181125 (JP2:OpenJPEG) (JP-LS:CharLS) Clang8.1.0", - "AcquisitionDuration": 285.0 + "AcquisitionDuration": 285.0, + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-geneva05/anat/sub-geneva05_space-other_T2w.json b/derivatives/data_preprocessed/sub-geneva05/anat/sub-geneva05_space-other_T2w.json index 113409212f..54f8b21414 100644 --- a/derivatives/data_preprocessed/sub-geneva05/anat/sub-geneva05_space-other_T2w.json +++ b/derivatives/data_preprocessed/sub-geneva05/anat/sub-geneva05_space-other_T2w.json @@ -1,68 +1,81 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.257, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma", - "InstitutionName": "Fondation_Campus_Biotech_Geneva", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "Chemin_des_Mines_9_Geneve_District_CH_1211", - "DeviceSerialNumber": "66054", - "StationName": "AWP66054", - "BodyPartExamined": "SPINE", - "PatientPosition": "HFS", - "ProcedureStepDescription": "D.Van_de_Ville_Nawal", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "T2w", - "ProtocolName": "T2w", - "ScanningSequence": "SE", - "SequenceVariant": "SK_SP_OSP", - "ScanOptions": "PFP", - "SequenceName": "_spcR_100", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS3D", "DIS2D"], - "SeriesNumber": 12, - "AcquisitionTime": "15:30:44.990000", - "AcquisitionNumber": 1, - "SliceThickness": 0.8, - "SAR": 0.59507, - "EchoTime": 0.12, - "RepetitionTime": 1.5, - "FlipAngle": 120, - "PartialFourier": 1, - "BaseResolution": 320, - "ShimSetting": [ - -1265, - -11721, - 6208, - -36, - 147, - 0, - -47, - 20 ], - "TxRefAmp": 263.682, - "PhaseResolution": 1, - "PhaseOversampling": 0.8, - "ReceiveCoilName": "Spine_32", - "ReceiveCoilActiveElements": "HC5-7;NC1,2;SP1", - "CoilString": "HC5-7;NC1_2;SP1", - "PulseSequenceDetails": "%SiemensSeq%_tse_vfl", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 100, - "EchoTrainLength": 76, - "PhaseEncodingSteps": 422, - "AcquisitionMatrixPE": 320, - "ReconMatrixPE": 320, - "PixelBandwidth": 625, - "DwellTime": 2.5e-06, - "ImageOrientationPatientDICOM": [ - 1.37e-13, - 1, - 4.895e-12, - -0.0279216, - 4.897e-12, - -0.99961 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181125 (JP2:OpenJPEG) (JP-LS:CharLS) Clang8.1.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 123.257, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma", + "InstitutionName": "Fondation_Campus_Biotech_Geneva", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "Chemin_des_Mines_9_Geneve_District_CH_1211", + "DeviceSerialNumber": "66054", + "StationName": "AWP66054", + "BodyPartExamined": "SPINE", + "PatientPosition": "HFS", + "ProcedureStepDescription": "D.Van_de_Ville_Nawal", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "T2w", + "ProtocolName": "T2w", + "ScanningSequence": "SE", + "SequenceVariant": "SK_SP_OSP", + "ScanOptions": "PFP", + "SequenceName": "_spcR_100", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS3D", + "DIS2D" + ], + "SeriesNumber": 12, + "AcquisitionTime": "15:30:44.990000", + "AcquisitionNumber": 1, + "SliceThickness": 0.8, + "SAR": 0.59507, + "EchoTime": 0.12, + "RepetitionTime": 1.5, + "FlipAngle": 120, + "PartialFourier": 1, + "BaseResolution": 320, + "ShimSetting": [ + -1265, + -11721, + 6208, + -36, + 147, + 0, + -47, + 20 + ], + "TxRefAmp": 263.682, + "PhaseResolution": 1, + "PhaseOversampling": 0.8, + "ReceiveCoilName": "Spine_32", + "ReceiveCoilActiveElements": "HC5-7;NC1,2;SP1", + "CoilString": "HC5-7;NC1_2;SP1", + "PulseSequenceDetails": "%SiemensSeq%_tse_vfl", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "EchoTrainLength": 76, + 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"Fondation_Campus_Biotech_Geneva", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "Chemin_des_Mines_9_Geneve_District_CH_1211", + "DeviceSerialNumber": "66054", + "StationName": "AWP66054", + "BodyPartExamined": "SPINE", + "PatientPosition": "HFS", + "ProcedureStepDescription": "D.Van_de_Ville_Nawal", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-MT1", + "ProtocolName": "GRE-MT1", + "ScanningSequence": "GR", + "SequenceVariant": "MTC_SP", + "ScanOptions": "MT", + "SequenceName": "_fl3d1", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "DIS2D" + ], + "SeriesNumber": 14, + "AcquisitionTime": "11:00:38.967500", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SAR": 0.686618, + "EchoTime": 0.00313, + "RepetitionTime": 0.035, + "FlipAngle": 9, + "PartialFourier": 1, + "BaseResolution": 256, + "ShimSetting": [ + -1265, + -11803, + 6118, + -1479, + 193, + 2495, + -850, + -59 + ], + "TxRefAmp": 302.322, + 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a/derivatives/data_preprocessed/sub-geneva06/anat/sub-geneva06_flip-2_mt-off_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-geneva06/anat/sub-geneva06_flip-2_mt-off_space-other_MTS.json @@ -1,65 +1,75 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.257, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma", - "InstitutionName": "Fondation_Campus_Biotech_Geneva", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "Chemin_des_Mines_9_Geneve_District_CH_1211", - "DeviceSerialNumber": "66054", - "StationName": "AWP66054", - "BodyPartExamined": "SPINE", - "PatientPosition": "HFS", - "ProcedureStepDescription": "D.Van_de_Ville_Nawal", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-T1w", - "ProtocolName": "GRE-T1w", - "ScanningSequence": "GR", - "SequenceVariant": "SP", - "SequenceName": "_fl3d1", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "DIS2D"], - "SeriesNumber": 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b/derivatives/data_preprocessed/sub-geneva06/anat/sub-geneva06_space-other_T1w.json index d5bc5638b9..ec17e8e9a6 100644 --- a/derivatives/data_preprocessed/sub-geneva06/anat/sub-geneva06_space-other_T1w.json +++ b/derivatives/data_preprocessed/sub-geneva06/anat/sub-geneva06_space-other_T1w.json @@ -1,67 +1,80 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.257, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma", - "InstitutionName": "Fondation_Campus_Biotech_Geneva", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "Chemin_des_Mines_9_Geneve_District_CH_1211", - "DeviceSerialNumber": "66054", - "StationName": "AWP66054", - "BodyPartExamined": "SPINE", - "PatientPosition": "HFS", - "ProcedureStepDescription": "D.Van_de_Ville_Nawal", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "T1w", - "ProtocolName": "T1w", - "ScanningSequence": "GR_IR", - "SequenceVariant": "SK_SP_MP", - 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"InPlanePhaseEncodingDirectionDICOM": "ROW", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181125 (JP2:OpenJPEG) (JP-LS:CharLS) Clang8.1.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 123.257, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma", + "InstitutionName": "Fondation_Campus_Biotech_Geneva", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "Chemin_des_Mines_9_Geneve_District_CH_1211", + "DeviceSerialNumber": "66054", + "StationName": "AWP66054", + "BodyPartExamined": "SPINE", + "PatientPosition": "HFS", + "ProcedureStepDescription": "D.Van_de_Ville_Nawal", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "T1w", + "ProtocolName": "T1w", + "ScanningSequence": "GR_IR", + "SequenceVariant": "SK_SP_MP", + "ScanOptions": "IR", + "SequenceName": "_tfl3d1_16", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS3D", + "DIS2D" + ], + 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(JP-LS:CharLS) Clang8.1.0", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-geneva06/anat/sub-geneva06_space-other_T2star.json b/derivatives/data_preprocessed/sub-geneva06/anat/sub-geneva06_space-other_T2star.json index 547587f021..97c0217652 100644 --- a/derivatives/data_preprocessed/sub-geneva06/anat/sub-geneva06_space-other_T2star.json +++ b/derivatives/data_preprocessed/sub-geneva06/anat/sub-geneva06_space-other_T2star.json @@ -74,5 +74,9 @@ "InPlanePhaseEncodingDirectionDICOM": "COL", "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20181125 (JP2:OpenJPEG) (JP-LS:CharLS) Clang8.1.0", - "AcquisitionDuration": 285.0 + "AcquisitionDuration": 285.0, + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-geneva06/anat/sub-geneva06_space-other_T2w.json b/derivatives/data_preprocessed/sub-geneva06/anat/sub-geneva06_space-other_T2w.json index 21dbd33d6a..904d8c75cb 100644 --- a/derivatives/data_preprocessed/sub-geneva06/anat/sub-geneva06_space-other_T2w.json +++ b/derivatives/data_preprocessed/sub-geneva06/anat/sub-geneva06_space-other_T2w.json @@ -1,68 +1,81 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.257, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma", - "InstitutionName": "Fondation_Campus_Biotech_Geneva", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "Chemin_des_Mines_9_Geneve_District_CH_1211", - "DeviceSerialNumber": "66054", - "StationName": "AWP66054", - "BodyPartExamined": "SPINE", - "PatientPosition": "HFS", - "ProcedureStepDescription": "D.Van_de_Ville_Nawal", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "T2w", - 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"DwellTime": 2.5e-06, - "ImageOrientationPatientDICOM": [ - 1.62e-13, - 1, - 4.894e-12, - -0.0331552, - 4.897e-12, - -0.99945 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181125 (JP2:OpenJPEG) (JP-LS:CharLS) Clang8.1.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 123.257, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma", + "InstitutionName": "Fondation_Campus_Biotech_Geneva", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "Chemin_des_Mines_9_Geneve_District_CH_1211", + "DeviceSerialNumber": "66054", + "StationName": "AWP66054", + "BodyPartExamined": "SPINE", + "PatientPosition": "HFS", + "ProcedureStepDescription": "D.Van_de_Ville_Nawal", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "T2w", + "ProtocolName": "T2w", + "ScanningSequence": "SE", + "SequenceVariant": "SK_SP_OSP", + "ScanOptions": "PFP", + "SequenceName": "_spcR_100", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS3D", + "DIS2D" + ], + "SeriesNumber": 12, + "AcquisitionTime": "10:52:22.972500", + "AcquisitionNumber": 1, + "SliceThickness": 0.8, + "SAR": 0.694214, + "EchoTime": 0.12, + "RepetitionTime": 1.5, + "FlipAngle": 120, + "PartialFourier": 1, + "BaseResolution": 320, + "ShimSetting": [ + -1265, + -11721, + 6208, + -36, + 147, + 0, + -47, + 20 + ], + "TxRefAmp": 302.322, + "PhaseResolution": 1, + "PhaseOversampling": 0.8, + "ReceiveCoilName": "Spine_32", + "ReceiveCoilActiveElements": "HC5-7;NC1,2;SP1", + "CoilString": "HC5-7;NC1_2;SP1", + "PulseSequenceDetails": "%SiemensSeq%_tse_vfl", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "EchoTrainLength": 76, + "PhaseEncodingSteps": 422, + "AcquisitionMatrixPE": 320, + "ReconMatrixPE": 320, + "PixelBandwidth": 625, + "DwellTime": 2.5e-06, + "ImageOrientationPatientDICOM": [ + 1.62e-13, + 1, + 4.894e-12, + 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"BodyPartExamined": "RUECKENMARK", + "PatientPosition": "HFS", + "ProcedureStepDescription": "Systems_Neuroscience_projects", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-MT1", + "ProtocolName": "GRE-MT1", + "ScanningSequence": "GR", + "SequenceVariant": "MTC_SP", + "ScanOptions": "MT", + "SequenceName": "_fl3d1", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "DIS2D" + ], + "SeriesNumber": 9, + "AcquisitionTime": "17:31:51.077500", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SAR": 0.566026, + "EchoTime": 0.00313, + "RepetitionTime": 0.035, + "FlipAngle": 9, + "PartialFourier": 1, + "BaseResolution": 256, + "ShimSetting": [ + -210, + -12005, + -11487, + -1792, + -158, + 1203, + -498, + -152 + ], + "TxRefAmp": 307.418, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC7;NC1,2", + "CoilString": "HC7;NC1_2", + "PulseSequenceDetails": "%SiemensSeq%_gre", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 255, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "PixelBandwidth": 260, + "DwellTime": 7.5e-06, + "ImageOrientationPatientDICOM": [ + 1, + 0, + 0, + 0, + 0.995227, + -0.0975829 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181125 (JP2:OpenJPEG) (JP-LS:CharLS) GCC5.5.0", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-hamburg01/anat/sub-hamburg01_flip-2_mt-off_space-other_MTS.json b/derivatives/data_preprocessed/sub-hamburg01/anat/sub-hamburg01_flip-2_mt-off_space-other_MTS.json index 4a106c0955..f66201283b 100644 --- a/derivatives/data_preprocessed/sub-hamburg01/anat/sub-hamburg01_flip-2_mt-off_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-hamburg01/anat/sub-hamburg01_flip-2_mt-off_space-other_MTS.json @@ -1,65 +1,75 @@ { 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"InstitutionalDepartmentName": "Department", + "InstitutionAddress": "Martinistrasse_52_Hamburg_Nord_DE_20246", + "DeviceSerialNumber": "167015", + "StationName": "MRC35041", + "BodyPartExamined": "RUECKENMARK", + "PatientPosition": "HFS", + "ProcedureStepDescription": "Systems_Neuroscience_projects", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-T1w", + "ProtocolName": "GRE-T1w", + "ScanningSequence": "GR", + "SequenceVariant": "SP", + "SequenceName": "_fl3d1", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "DIS2D" + ], + "SeriesNumber": 11, + "AcquisitionTime": "17:36:49.972500", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SAR": 0.0366994, + "EchoTime": 0.00313, + "RepetitionTime": 0.015, + "FlipAngle": 15, + "PartialFourier": 1, + "BaseResolution": 256, + "ShimSetting": [ + -210, + -12005, + -11487, + -1792, + -158, + 1203, + -498, + -152 + ], + "TxRefAmp": 307.418, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC7;NC1,2", + "CoilString": "HC7;NC1_2", + "PulseSequenceDetails": "%SiemensSeq%_gre", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 255, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "PixelBandwidth": 260, + "DwellTime": 7.5e-06, + "ImageOrientationPatientDICOM": [ + 1, + 0, + 0, + 0, + 0.995227, + -0.0975829 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181125 (JP2:OpenJPEG) (JP-LS:CharLS) GCC5.5.0", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-hamburg01/anat/sub-hamburg01_space-other_T1w.json b/derivatives/data_preprocessed/sub-hamburg01/anat/sub-hamburg01_space-other_T1w.json index e86629ca58..fe47881cca 100644 --- a/derivatives/data_preprocessed/sub-hamburg01/anat/sub-hamburg01_space-other_T1w.json +++ b/derivatives/data_preprocessed/sub-hamburg01/anat/sub-hamburg01_space-other_T1w.json @@ -1,67 +1,80 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.247, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma_fit", - "InstitutionName": "Systems_Neuroscience_UKE", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "Martinistrasse_52_Hamburg_Nord_DE_20246", - "DeviceSerialNumber": "167015", - "StationName": "MRC35041", - "BodyPartExamined": "RUECKENMARK", - "PatientPosition": "HFS", - "ProcedureStepDescription": "Systems_Neuroscience_projects", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "T1w", - "ProtocolName": "T1w", - "ScanningSequence": "GR_IR", - "SequenceVariant": "SK_SP_MP", - "ScanOptions": "IR", - "SequenceName": "_tfl3d1_16", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS3D", "DIS2D"], - "SeriesNumber": 2, - "AcquisitionTime": "17:06:37.037500", - 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"ImagingFrequency": 123.247, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma_fit", + "InstitutionName": "Systems_Neuroscience_UKE", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "Martinistrasse_52_Hamburg_Nord_DE_20246", + "DeviceSerialNumber": "167015", + "StationName": "MRC35041", + "BodyPartExamined": "RUECKENMARK", + "PatientPosition": "HFS", + "ProcedureStepDescription": "Systems_Neuroscience_projects", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "T1w", + "ProtocolName": "T1w", + "ScanningSequence": "GR_IR", + "SequenceVariant": "SK_SP_MP", + "ScanOptions": "IR", + "SequenceName": "_tfl3d1_16", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS3D", + "DIS2D" + ], + "SeriesNumber": 2, + "AcquisitionTime": "17:06:37.037500", + "AcquisitionNumber": 1, + "SliceThickness": 1, + "SAR": 0.0575224, + "EchoTime": 0.00372, + "RepetitionTime": 2, + "InversionTime": 1, + "FlipAngle": 9, + "PartialFourier": 1, + "BaseResolution": 320, + "ShimSetting": [ + -176, + -12030, + -11503, + 30, + -6, + -44, + 2, + 23 + ], + "TxRefAmp": 272.637, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC1-7;NC1,2", + "CoilString": "HC1-7;NC1_2", + "PulseSequenceDetails": "%SiemensSeq%_tfl", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 81.25, + "PhaseEncodingSteps": 259, + "AcquisitionMatrixPE": 260, + "ReconMatrixPE": 320, + "PixelBandwidth": 150, + "DwellTime": 1.04e-05, + "ImageOrientationPatientDICOM": [ + 0, + 1, + 0, + 0, + 0, + -1 + ], + "InPlanePhaseEncodingDirectionDICOM": "ROW", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181125 (JP2:OpenJPEG) (JP-LS:CharLS) GCC5.5.0", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-hamburg01/anat/sub-hamburg01_space-other_T2star.json b/derivatives/data_preprocessed/sub-hamburg01/anat/sub-hamburg01_space-other_T2star.json index 78512dde34..08a53f5c7a 100644 --- a/derivatives/data_preprocessed/sub-hamburg01/anat/sub-hamburg01_space-other_T2star.json +++ b/derivatives/data_preprocessed/sub-hamburg01/anat/sub-hamburg01_space-other_T2star.json @@ -75,5 +75,9 @@ "InPlanePhaseEncodingDirectionDICOM": "COL", "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20181125 (JP2:OpenJPEG) (JP-LS:CharLS) GCC5.5.0", - "AcquisitionDuration": 285.0 + "AcquisitionDuration": 285.0, + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-hamburg01/anat/sub-hamburg01_space-other_T2w.json b/derivatives/data_preprocessed/sub-hamburg01/anat/sub-hamburg01_space-other_T2w.json index a80910c596..b72e7e9da7 100644 --- a/derivatives/data_preprocessed/sub-hamburg01/anat/sub-hamburg01_space-other_T2w.json +++ b/derivatives/data_preprocessed/sub-hamburg01/anat/sub-hamburg01_space-other_T2w.json @@ -1,68 +1,81 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.247, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma_fit", - "InstitutionName": "Systems_Neuroscience_UKE", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "Martinistrasse_52_Hamburg_Nord_DE_20246", - "DeviceSerialNumber": "167015", - "StationName": "MRC35041", - "BodyPartExamined": "RUECKENMARK", - "PatientPosition": "HFS", - "ProcedureStepDescription": "Systems_Neuroscience_projects", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "T2w", - "ProtocolName": "T2w", - "ScanningSequence": "SE", - "SequenceVariant": "SK_SP_OSP", - "ScanOptions": "PFP", - "SequenceName": "_spcR_100", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", 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"dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181125 (JP2:OpenJPEG) (JP-LS:CharLS) GCC5.5.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 123.247, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma_fit", + "InstitutionName": "Systems_Neuroscience_UKE", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "Martinistrasse_52_Hamburg_Nord_DE_20246", + "DeviceSerialNumber": "167015", + "StationName": "MRC35041", + "BodyPartExamined": "RUECKENMARK", + "PatientPosition": "HFS", + "ProcedureStepDescription": "Systems_Neuroscience_projects", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "T2w", + "ProtocolName": "T2w", + "ScanningSequence": "SE", + "SequenceVariant": "SK_SP_OSP", + "ScanOptions": "PFP", + "SequenceName": "_spcR_100", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS3D", + "DIS2D" + ], + "SeriesNumber": 3, + "AcquisitionTime": "17:11:37.080000", + 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GCC5.5.0", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-hamburg02/anat/sub-hamburg02_flip-1_mt-on_space-other_MTS.json b/derivatives/data_preprocessed/sub-hamburg02/anat/sub-hamburg02_flip-1_mt-on_space-other_MTS.json index af30e505d4..59c1633fc1 100644 --- a/derivatives/data_preprocessed/sub-hamburg02/anat/sub-hamburg02_flip-1_mt-on_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-hamburg02/anat/sub-hamburg02_flip-1_mt-on_space-other_MTS.json @@ -1,66 +1,76 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.247, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma_fit", - "InstitutionName": "Systems_Neuroscience_UKE", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "Martinistrasse_52_Hamburg_Nord_DE_20246", - "DeviceSerialNumber": "167015", - "StationName": "MRC35041", - "BodyPartExamined": 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"MRAcquisitionType": "3D", + "SeriesDescription": "GRE-MT1", + "ProtocolName": "GRE-MT1", + "ScanningSequence": "GR", + "SequenceVariant": "MTC_SP", + "ScanOptions": "MT", + "SequenceName": "_fl3d1", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "DIS2D" + ], + "SeriesNumber": 5, + "AcquisitionTime": "12:49:40.967500", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SAR": 0.539687, + "EchoTime": 0.00313, + "RepetitionTime": 0.035, + "FlipAngle": 9, + "PartialFourier": 1, + "BaseResolution": 256, + "ShimSetting": [ + -149, + -12043, + -11368, + -940, + -296, + 2599, + -670, + 271 + ], + "TxRefAmp": 264.849, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC5-7;NC1,2", + "CoilString": "HC5-7;NC1_2", + "PulseSequenceDetails": "%SiemensSeq%_gre", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 255, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "PixelBandwidth": 260, + "DwellTime": 7.5e-06, + "ImageOrientationPatientDICOM": [ + 0.995623, + -0.0109527, + 0.0928217, + 2.47924e-08, + 0.99311, + 0.117184 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181125 (JP2:OpenJPEG) (JP-LS:CharLS) GCC5.5.0", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-hamburg02/anat/sub-hamburg02_flip-2_mt-off_space-other_MTS.json b/derivatives/data_preprocessed/sub-hamburg02/anat/sub-hamburg02_flip-2_mt-off_space-other_MTS.json index 09bd2c78d6..dd8970d812 100644 --- a/derivatives/data_preprocessed/sub-hamburg02/anat/sub-hamburg02_flip-2_mt-off_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-hamburg02/anat/sub-hamburg02_flip-2_mt-off_space-other_MTS.json @@ -1,65 +1,75 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.247, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma_fit", - "InstitutionName": "Systems_Neuroscience_UKE", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "Martinistrasse_52_Hamburg_Nord_DE_20246", - "DeviceSerialNumber": "167015", - "StationName": "MRC35041", - "BodyPartExamined": "RUECKENMARK", - "PatientPosition": "HFS", - "ProcedureStepDescription": "Systems_Neuroscience_projects", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-T1w", - "ProtocolName": "GRE-T1w", - "ScanningSequence": "GR", - "SequenceVariant": "SP", - "SequenceName": "_fl3d1", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "DIS2D"], - "SeriesNumber": 7, - "AcquisitionTime": "12:54:6.930000", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SAR": 0.0349916, - "EchoTime": 0.00313, - "RepetitionTime": 0.015, - "FlipAngle": 15, - "PartialFourier": 1, - "BaseResolution": 256, - "ShimSetting": [ - -149, - -12043, - -11368, - -940, - -296, - 2599, - -670, - 271 ], - 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"Martinistrasse_52_Hamburg_Nord_DE_20246", + "DeviceSerialNumber": "167015", + "StationName": "MRC35041", + "BodyPartExamined": "RUECKENMARK", + "PatientPosition": "HFS", + "ProcedureStepDescription": "Systems_Neuroscience_projects", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-T1w", + "ProtocolName": "GRE-T1w", + "ScanningSequence": "GR", + "SequenceVariant": "SP", + "SequenceName": "_fl3d1", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "DIS2D" + ], + "SeriesNumber": 7, + "AcquisitionTime": "12:54:6.930000", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SAR": 0.0349916, + "EchoTime": 0.00313, + "RepetitionTime": 0.015, + "FlipAngle": 15, + "PartialFourier": 1, + "BaseResolution": 256, + "ShimSetting": [ + -149, + -12043, + -11368, + -940, + -296, + 2599, + -670, + 271 + ], + "TxRefAmp": 264.849, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC5-7;NC1,2", + "CoilString": "HC5-7;NC1_2", + "PulseSequenceDetails": "%SiemensSeq%_gre", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 255, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "PixelBandwidth": 260, + "DwellTime": 7.5e-06, + "ImageOrientationPatientDICOM": [ + 0.995623, + -0.0109527, + 0.0928217, + 2.47924e-08, + 0.99311, + 0.117184 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181125 (JP2:OpenJPEG) (JP-LS:CharLS) GCC5.5.0", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-hamburg02/anat/sub-hamburg02_space-other_T1w.json b/derivatives/data_preprocessed/sub-hamburg02/anat/sub-hamburg02_space-other_T1w.json index 2ca9e2124d..5319fb9d28 100644 --- a/derivatives/data_preprocessed/sub-hamburg02/anat/sub-hamburg02_space-other_T1w.json +++ b/derivatives/data_preprocessed/sub-hamburg02/anat/sub-hamburg02_space-other_T1w.json @@ -1,67 +1,80 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.247, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma_fit", - "InstitutionName": "Systems_Neuroscience_UKE", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "Martinistrasse_52_Hamburg_Nord_DE_20246", - "DeviceSerialNumber": "167015", - "StationName": "MRC35041", - "BodyPartExamined": "RUECKENMARK", - "PatientPosition": "HFS", - "ProcedureStepDescription": "Systems_Neuroscience_projects", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "T1w", - "ProtocolName": "T1w", - "ScanningSequence": "GR_IR", - "SequenceVariant": "SK_SP_MP", - "ScanOptions": "IR", - "SequenceName": "_tfl3d1_16", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS3D", "DIS2D"], - "SeriesNumber": 2, - "AcquisitionTime": "12:36:36.695000", - 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+ "ImagingFrequency": 123.247, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma_fit", + "InstitutionName": "Systems_Neuroscience_UKE", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "Martinistrasse_52_Hamburg_Nord_DE_20246", + "DeviceSerialNumber": "167015", + "StationName": "MRC35041", + "BodyPartExamined": "RUECKENMARK", + "PatientPosition": "HFS", + "ProcedureStepDescription": "Systems_Neuroscience_projects", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "T1w", + "ProtocolName": "T1w", + "ScanningSequence": "GR_IR", + "SequenceVariant": "SK_SP_MP", + "ScanOptions": "IR", + "SequenceName": "_tfl3d1_16", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS3D", + "DIS2D" + ], + "SeriesNumber": 2, + "AcquisitionTime": "12:36:36.695000", + "AcquisitionNumber": 1, + "SliceThickness": 1, + "SAR": 0.0595054, + "EchoTime": 0.00372, + "RepetitionTime": 2, + "InversionTime": 1, + "FlipAngle": 9, + "PartialFourier": 1, + "BaseResolution": 320, + "ShimSetting": [ + -176, + -12030, + -11503, + 30, + -6, + -44, + 2, + 23 + ], + "TxRefAmp": 245.217, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC1-7;NC1,2", + "CoilString": "HC1-7;NC1_2", + "PulseSequenceDetails": "%SiemensSeq%_tfl", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 81.25, + "PhaseEncodingSteps": 259, + "AcquisitionMatrixPE": 260, + "ReconMatrixPE": 320, + "PixelBandwidth": 150, + "DwellTime": 1.04e-05, + "ImageOrientationPatientDICOM": [ + 0, + 1, + 0, + 0.050593, + 0, + -0.998719 + ], + "InPlanePhaseEncodingDirectionDICOM": "ROW", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181125 (JP2:OpenJPEG) (JP-LS:CharLS) GCC5.5.0", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-hamburg02/anat/sub-hamburg02_space-other_T2star.json b/derivatives/data_preprocessed/sub-hamburg02/anat/sub-hamburg02_space-other_T2star.json index 11c929b4bd..5070dcda11 100644 --- a/derivatives/data_preprocessed/sub-hamburg02/anat/sub-hamburg02_space-other_T2star.json +++ b/derivatives/data_preprocessed/sub-hamburg02/anat/sub-hamburg02_space-other_T2star.json @@ -75,5 +75,9 @@ "InPlanePhaseEncodingDirectionDICOM": "COL", "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20181125 (JP2:OpenJPEG) (JP-LS:CharLS) GCC5.5.0", - "AcquisitionDuration": 285.0 + "AcquisitionDuration": 285.0, + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-hamburg02/anat/sub-hamburg02_space-other_T2w.json b/derivatives/data_preprocessed/sub-hamburg02/anat/sub-hamburg02_space-other_T2w.json index 55b676eac1..dc0bd4c67f 100644 --- a/derivatives/data_preprocessed/sub-hamburg02/anat/sub-hamburg02_space-other_T2w.json +++ b/derivatives/data_preprocessed/sub-hamburg02/anat/sub-hamburg02_space-other_T2w.json @@ -1,68 +1,81 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.247, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma_fit", - "InstitutionName": "Systems_Neuroscience_UKE", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "Martinistrasse_52_Hamburg_Nord_DE_20246", - "DeviceSerialNumber": "167015", - "StationName": "MRC35041", - "BodyPartExamined": "RUECKENMARK", - "PatientPosition": "HFS", - "ProcedureStepDescription": "Systems_Neuroscience_projects", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "T2w", - "ProtocolName": "T2w", - "ScanningSequence": "SE", - "SequenceVariant": "SK_SP_OSP", - "ScanOptions": "PFP", - "SequenceName": "_spcR_100", - "ImageType": 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"COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181125 (JP2:OpenJPEG) (JP-LS:CharLS) GCC5.5.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 123.247, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma_fit", + "InstitutionName": "Systems_Neuroscience_UKE", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "Martinistrasse_52_Hamburg_Nord_DE_20246", + "DeviceSerialNumber": "167015", + "StationName": "MRC35041", + "BodyPartExamined": "RUECKENMARK", + "PatientPosition": "HFS", + "ProcedureStepDescription": "Systems_Neuroscience_projects", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "T2w", + "ProtocolName": "T2w", + "ScanningSequence": "SE", + "SequenceVariant": "SK_SP_OSP", + "ScanOptions": "PFP", + "SequenceName": "_spcR_100", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS3D", + "DIS2D" + ], + "SeriesNumber": 3, + "AcquisitionTime": "12:41:51.692500", + "AcquisitionNumber": 1, + "SliceThickness": 0.8, + "SAR": 0.545658, + "EchoTime": 0.12, + "RepetitionTime": 1.5, + "FlipAngle": 120, + "PartialFourier": 1, + "BaseResolution": 320, + "ShimSetting": [ + -176, + -12030, + -11503, + 30, + -6, + -44, + 2, + 23 + ], + "TxRefAmp": 264.849, + "PhaseResolution": 1, + "PhaseOversampling": 0.8, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC5-7;NC1,2", + "CoilString": "HC5-7;NC1_2", + "PulseSequenceDetails": "%SiemensSeq%_tse_vfl", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "EchoTrainLength": 76, + "PhaseEncodingSteps": 422, + "AcquisitionMatrixPE": 320, + "ReconMatrixPE": 320, + "PixelBandwidth": 625, + "DwellTime": 2.5e-06, + "ImageOrientationPatientDICOM": [ + -2.65e-13, + 1, + 4.889e-12, + 0.0540788, + 4.897e-12, + -0.998537 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181125 (JP2:OpenJPEG) (JP-LS:CharLS) GCC5.5.0", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-hamburg03/anat/sub-hamburg03_flip-1_mt-on_space-other_MTS.json b/derivatives/data_preprocessed/sub-hamburg03/anat/sub-hamburg03_flip-1_mt-on_space-other_MTS.json index 0b8d220933..195f8ae263 100644 --- a/derivatives/data_preprocessed/sub-hamburg03/anat/sub-hamburg03_flip-1_mt-on_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-hamburg03/anat/sub-hamburg03_flip-1_mt-on_space-other_MTS.json @@ -1,66 +1,76 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.247, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma_fit", - "InstitutionName": "Systems_Neuroscience_UKE", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "Martinistrasse_52_Hamburg_Nord_DE_20246", - "DeviceSerialNumber": "167015", - "StationName": "MRC35041", - "BodyPartExamined": "RUECKENMARK", - "PatientPosition": "HFS", - "ProcedureStepDescription": "Systems_Neuroscience_projects", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-MT1", - "ProtocolName": "GRE-MT1", - "ScanningSequence": "GR", - "SequenceVariant": "MTC_SP", - "ScanOptions": "MT", - "SequenceName": "_fl3d1", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "DIS2D"], - "SeriesNumber": 5, - "AcquisitionTime": "09:37:33.002500", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SAR": 0.479524, - "EchoTime": 0.00313, - "RepetitionTime": 0.035, - "FlipAngle": 9, - "PartialFourier": 1, - "BaseResolution": 256, - "ShimSetting": [ - -188, - -12176, - -11458, - -1311, - -81, - 2226, - -312, - 42 ], - "TxRefAmp": 281.347, - "PhaseResolution": 1, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC7;NC1,2", - "CoilString": "HC7;NC1_2", - "PulseSequenceDetails": "%SiemensSeq%_gre", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 100, - "PhaseEncodingSteps": 255, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 256, - "PixelBandwidth": 260, - "DwellTime": 7.5e-06, - "ImageOrientationPatientDICOM": [ - 0.999657, - -0.00132438, - 0.0261434, - 1.09521e-08, - 0.998719, - 0.0505929 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181125 (JP2:OpenJPEG) (JP-LS:CharLS) GCC5.5.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 123.247, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma_fit", + "InstitutionName": "Systems_Neuroscience_UKE", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "Martinistrasse_52_Hamburg_Nord_DE_20246", + "DeviceSerialNumber": "167015", + "StationName": "MRC35041", + "BodyPartExamined": "RUECKENMARK", + "PatientPosition": "HFS", + "ProcedureStepDescription": "Systems_Neuroscience_projects", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-MT1", + "ProtocolName": "GRE-MT1", + "ScanningSequence": "GR", + "SequenceVariant": "MTC_SP", + "ScanOptions": "MT", + "SequenceName": "_fl3d1", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "DIS2D" + ], + "SeriesNumber": 5, + "AcquisitionTime": "09:37:33.002500", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SAR": 0.479524, + "EchoTime": 0.00313, + "RepetitionTime": 0.035, + "FlipAngle": 9, + "PartialFourier": 1, + "BaseResolution": 256, + "ShimSetting": [ + -188, + -12176, + -11458, + -1311, + -81, + 2226, + -312, + 42 + ], + "TxRefAmp": 281.347, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC7;NC1,2", + "CoilString": "HC7;NC1_2", + "PulseSequenceDetails": "%SiemensSeq%_gre", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 255, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "PixelBandwidth": 260, + "DwellTime": 7.5e-06, + "ImageOrientationPatientDICOM": [ + 0.999657, + -0.00132438, + 0.0261434, + 1.09521e-08, + 0.998719, + 0.0505929 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181125 (JP2:OpenJPEG) (JP-LS:CharLS) GCC5.5.0", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-hamburg03/anat/sub-hamburg03_flip-2_mt-off_space-other_MTS.json b/derivatives/data_preprocessed/sub-hamburg03/anat/sub-hamburg03_flip-2_mt-off_space-other_MTS.json index 476b91397c..d41896cf3f 100644 --- a/derivatives/data_preprocessed/sub-hamburg03/anat/sub-hamburg03_flip-2_mt-off_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-hamburg03/anat/sub-hamburg03_flip-2_mt-off_space-other_MTS.json @@ -1,65 +1,75 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.247, - "Manufacturer": 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"Martinistrasse_52_Hamburg_Nord_DE_20246", + "DeviceSerialNumber": "167015", + "StationName": "MRC35041", + "BodyPartExamined": "RUECKENMARK", + "PatientPosition": "HFS", + "ProcedureStepDescription": "Systems_Neuroscience_projects", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-T1w", + "ProtocolName": "GRE-T1w", + "ScanningSequence": "GR", + "SequenceVariant": "SP", + "SequenceName": "_fl3d1", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "DIS2D" + ], + "SeriesNumber": 7, + "AcquisitionTime": "09:41:58.887500", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SAR": 0.0310908, + "EchoTime": 0.00313, + "RepetitionTime": 0.015, + "FlipAngle": 15, + "PartialFourier": 1, + "BaseResolution": 256, + "ShimSetting": [ + -188, + -12176, + -11458, + -1311, + -81, + 2226, + -312, + 42 + ], + "TxRefAmp": 281.347, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC7;NC1,2", + "CoilString": "HC7;NC1_2", + "PulseSequenceDetails": "%SiemensSeq%_gre", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 255, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "PixelBandwidth": 260, + "DwellTime": 7.5e-06, + "ImageOrientationPatientDICOM": [ + 0.999657, + -0.00132438, + 0.0261434, + 1.09521e-08, + 0.998719, + 0.0505929 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181125 (JP2:OpenJPEG) (JP-LS:CharLS) GCC5.5.0", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-hamburg03/anat/sub-hamburg03_space-other_T1w.json b/derivatives/data_preprocessed/sub-hamburg03/anat/sub-hamburg03_space-other_T1w.json index b3d0498935..35f80d4302 100644 --- a/derivatives/data_preprocessed/sub-hamburg03/anat/sub-hamburg03_space-other_T1w.json +++ b/derivatives/data_preprocessed/sub-hamburg03/anat/sub-hamburg03_space-other_T1w.json @@ -1,67 +1,80 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.247, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma_fit", - "InstitutionName": "Systems_Neuroscience_UKE", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "Martinistrasse_52_Hamburg_Nord_DE_20246", - "DeviceSerialNumber": "167015", - "StationName": "MRC35041", - "BodyPartExamined": "RUECKENMARK", - "PatientPosition": "HFS", - "ProcedureStepDescription": "Systems_Neuroscience_projects", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "T1w", - "ProtocolName": "T1w", - "ScanningSequence": "GR_IR", - "SequenceVariant": "SK_SP_MP", - "ScanOptions": "IR", - "SequenceName": "_tfl3d1_16", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS3D", "DIS2D"], - "SeriesNumber": 2, - "AcquisitionTime": "09:21:29.685000", - 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3, + "ImagingFrequency": 123.247, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma_fit", + "InstitutionName": "Systems_Neuroscience_UKE", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "Martinistrasse_52_Hamburg_Nord_DE_20246", + "DeviceSerialNumber": "167015", + "StationName": "MRC35041", + "BodyPartExamined": "RUECKENMARK", + "PatientPosition": "HFS", + "ProcedureStepDescription": "Systems_Neuroscience_projects", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "T1w", + "ProtocolName": "T1w", + "ScanningSequence": "GR_IR", + "SequenceVariant": "SK_SP_MP", + "ScanOptions": "IR", + "SequenceName": "_tfl3d1_16", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS3D", + "DIS2D" + ], + "SeriesNumber": 2, + "AcquisitionTime": "09:21:29.685000", + "AcquisitionNumber": 1, + "SliceThickness": 1, + "SAR": 0.0588669, + "EchoTime": 0.00372, + "RepetitionTime": 2, + "InversionTime": 1, + "FlipAngle": 9, + "PartialFourier": 1, + "BaseResolution": 320, + "ShimSetting": [ + -176, + -12030, + -11503, + 30, + -6, + -44, + 2, + 23 + ], + "TxRefAmp": 274.017, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC1-7;NC1,2", + "CoilString": "HC1-7;NC1_2", + "PulseSequenceDetails": "%SiemensSeq%_tfl", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 81.25, + "PhaseEncodingSteps": 259, + "AcquisitionMatrixPE": 260, + "ReconMatrixPE": 320, + "PixelBandwidth": 150, + "DwellTime": 1.04e-05, + "ImageOrientationPatientDICOM": [ + 0, + 1, + 0, + 0.0209424, + 0, + -0.999781 + ], + "InPlanePhaseEncodingDirectionDICOM": "ROW", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181125 (JP2:OpenJPEG) (JP-LS:CharLS) GCC5.5.0", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-hamburg03/anat/sub-hamburg03_space-other_T2star.json b/derivatives/data_preprocessed/sub-hamburg03/anat/sub-hamburg03_space-other_T2star.json index 254d5be77e..c579caf225 100644 --- a/derivatives/data_preprocessed/sub-hamburg03/anat/sub-hamburg03_space-other_T2star.json +++ b/derivatives/data_preprocessed/sub-hamburg03/anat/sub-hamburg03_space-other_T2star.json @@ -75,5 +75,9 @@ "InPlanePhaseEncodingDirectionDICOM": "COL", "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20181125 (JP2:OpenJPEG) (JP-LS:CharLS) GCC5.5.0", - "AcquisitionDuration": 285.0 + "AcquisitionDuration": 285.0, + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-hamburg03/anat/sub-hamburg03_space-other_T2w.json b/derivatives/data_preprocessed/sub-hamburg03/anat/sub-hamburg03_space-other_T2w.json index 63479b3201..20e575425f 100644 --- a/derivatives/data_preprocessed/sub-hamburg03/anat/sub-hamburg03_space-other_T2w.json +++ b/derivatives/data_preprocessed/sub-hamburg03/anat/sub-hamburg03_space-other_T2w.json @@ -1,68 +1,81 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.247, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma_fit", - "InstitutionName": "Systems_Neuroscience_UKE", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "Martinistrasse_52_Hamburg_Nord_DE_20246", - "DeviceSerialNumber": "167015", - "StationName": "MRC35041", - "BodyPartExamined": "RUECKENMARK", - "PatientPosition": "HFS", - "ProcedureStepDescription": "Systems_Neuroscience_projects", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "T2w", - "ProtocolName": "T2w", - "ScanningSequence": "SE", - "SequenceVariant": "SK_SP_OSP", - "ScanOptions": "PFP", - "SequenceName": "_spcR_100", - "ImageType": 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"COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181125 (JP2:OpenJPEG) (JP-LS:CharLS) GCC5.5.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 123.247, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma_fit", + "InstitutionName": "Systems_Neuroscience_UKE", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "Martinistrasse_52_Hamburg_Nord_DE_20246", + "DeviceSerialNumber": "167015", + "StationName": "MRC35041", + "BodyPartExamined": "RUECKENMARK", + "PatientPosition": "HFS", + "ProcedureStepDescription": "Systems_Neuroscience_projects", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "T2w", + "ProtocolName": "T2w", + "ScanningSequence": "SE", + "SequenceVariant": "SK_SP_OSP", + "ScanOptions": "PFP", + "SequenceName": "_spcR_100", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS3D", + "DIS2D" + ], + "SeriesNumber": 3, + "AcquisitionTime": "09:27:3.697500", + "AcquisitionNumber": 1, + "SliceThickness": 0.8, + "SAR": 0.484829, + "EchoTime": 0.12, + "RepetitionTime": 1.5, + "FlipAngle": 120, + "PartialFourier": 1, + "BaseResolution": 320, + "ShimSetting": [ + -176, + -12030, + -11503, + 30, + -6, + -44, + 2, + 23 + ], + "TxRefAmp": 281.347, + "PhaseResolution": 1, + "PhaseOversampling": 0.8, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC5-7;NC1,2", + "CoilString": "HC5-7;NC1_2", + "PulseSequenceDetails": "%SiemensSeq%_tse_vfl", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "EchoTrainLength": 76, + "PhaseEncodingSteps": 422, + "AcquisitionMatrixPE": 320, + "ReconMatrixPE": 320, + "PixelBandwidth": 625, + "DwellTime": 2.5e-06, + "ImageOrientationPatientDICOM": [ + -1.97e-13, + 1, + 4.893e-12, + 0.0401318, + 4.897e-12, + -0.999194 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181125 (JP2:OpenJPEG) (JP-LS:CharLS) GCC5.5.0", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-hamburg04/anat/sub-hamburg04_flip-1_mt-on_space-other_MTS.json b/derivatives/data_preprocessed/sub-hamburg04/anat/sub-hamburg04_flip-1_mt-on_space-other_MTS.json index f3f56228b6..b46c3dbddd 100644 --- a/derivatives/data_preprocessed/sub-hamburg04/anat/sub-hamburg04_flip-1_mt-on_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-hamburg04/anat/sub-hamburg04_flip-1_mt-on_space-other_MTS.json @@ -1,66 +1,76 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.247, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma_fit", - "InstitutionName": "Systems_Neuroscience_UKE", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "Martinistrasse_52_Hamburg_Nord_DE_20246", - "DeviceSerialNumber": "167015", - "StationName": "MRC35041", - "BodyPartExamined": "RUECKENMARK", - "PatientPosition": "HFS", - "ProcedureStepDescription": "Systems_Neuroscience_projects", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-MT1", - "ProtocolName": "GRE-MT1", - "ScanningSequence": "GR", - "SequenceVariant": "MTC_SP", - "ScanOptions": "MT", - "SequenceName": "_fl3d1", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "DIS2D"], - "SeriesNumber": 5, - "AcquisitionTime": "16:19:15.975000", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SAR": 0.507828, - "EchoTime": 0.00313, - "RepetitionTime": 0.035, - "FlipAngle": 9, - "PartialFourier": 1, - "BaseResolution": 256, - "ShimSetting": [ - -226, - -12089, - -11479, - -1370, - -294, - 1897, - -318, - 152 ], - "TxRefAmp": 259.247, - "PhaseResolution": 1, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC5-7;NC1,2", - "CoilString": "HC5-7;NC1_2", - "PulseSequenceDetails": "%SiemensSeq%_gre", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 100, - "PhaseEncodingSteps": 255, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 256, - "PixelBandwidth": 260, - "DwellTime": 7.5e-06, - "ImageOrientationPatientDICOM": [ - 0.997072, - -0.006151, - 0.0762241, - 2.1874e-08, - 0.99676, - 0.0804345 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181125 (JP2:OpenJPEG) (JP-LS:CharLS) GCC5.5.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 123.247, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma_fit", + "InstitutionName": "Systems_Neuroscience_UKE", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "Martinistrasse_52_Hamburg_Nord_DE_20246", + "DeviceSerialNumber": "167015", + "StationName": "MRC35041", + "BodyPartExamined": "RUECKENMARK", + "PatientPosition": "HFS", + "ProcedureStepDescription": "Systems_Neuroscience_projects", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-MT1", + "ProtocolName": "GRE-MT1", + "ScanningSequence": "GR", + "SequenceVariant": "MTC_SP", + "ScanOptions": "MT", + "SequenceName": "_fl3d1", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "DIS2D" + ], + "SeriesNumber": 5, + "AcquisitionTime": "16:19:15.975000", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SAR": 0.507828, + "EchoTime": 0.00313, + "RepetitionTime": 0.035, + "FlipAngle": 9, + "PartialFourier": 1, + "BaseResolution": 256, + "ShimSetting": [ + -226, + -12089, + -11479, + -1370, + -294, + 1897, + -318, + 152 + ], + "TxRefAmp": 259.247, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC5-7;NC1,2", + "CoilString": "HC5-7;NC1_2", + "PulseSequenceDetails": "%SiemensSeq%_gre", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 255, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "PixelBandwidth": 260, + "DwellTime": 7.5e-06, + "ImageOrientationPatientDICOM": [ + 0.997072, + -0.006151, + 0.0762241, + 2.1874e-08, + 0.99676, + 0.0804345 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181125 (JP2:OpenJPEG) (JP-LS:CharLS) GCC5.5.0", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-hamburg04/anat/sub-hamburg04_flip-2_mt-off_space-other_MTS.json b/derivatives/data_preprocessed/sub-hamburg04/anat/sub-hamburg04_flip-2_mt-off_space-other_MTS.json index 96f4ccd120..a7bcfe8304 100644 --- a/derivatives/data_preprocessed/sub-hamburg04/anat/sub-hamburg04_flip-2_mt-off_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-hamburg04/anat/sub-hamburg04_flip-2_mt-off_space-other_MTS.json @@ -1,65 +1,75 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.247, - "Manufacturer": 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"HC5-7;NC1_2", + "PulseSequenceDetails": "%SiemensSeq%_gre", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 255, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "PixelBandwidth": 260, + "DwellTime": 7.5e-06, + "ImageOrientationPatientDICOM": [ + 0.997072, + -0.006151, + 0.0762241, + 2.1874e-08, + 0.99676, + 0.0804345 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181125 (JP2:OpenJPEG) (JP-LS:CharLS) GCC5.5.0", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-hamburg04/anat/sub-hamburg04_space-other_T1w.json b/derivatives/data_preprocessed/sub-hamburg04/anat/sub-hamburg04_space-other_T1w.json index 08a29b8bdf..0a08b398a0 100644 --- a/derivatives/data_preprocessed/sub-hamburg04/anat/sub-hamburg04_space-other_T1w.json +++ b/derivatives/data_preprocessed/sub-hamburg04/anat/sub-hamburg04_space-other_T1w.json @@ -1,67 +1,80 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.247, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma_fit", - "InstitutionName": "Systems_Neuroscience_UKE", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "Martinistrasse_52_Hamburg_Nord_DE_20246", - "DeviceSerialNumber": "167015", - "StationName": "MRC35041", - "BodyPartExamined": "RUECKENMARK", - "PatientPosition": "HFS", - "ProcedureStepDescription": "Systems_Neuroscience_projects", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "T1w", - "ProtocolName": "T1w", - "ScanningSequence": "GR_IR", - "SequenceVariant": "SK_SP_MP", - "ScanOptions": "IR", - "SequenceName": "_tfl3d1_16", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS3D", "DIS2D"], - "SeriesNumber": 2, - "AcquisitionTime": "16:05:30.015000", - 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3, + "ImagingFrequency": 123.247, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma_fit", + "InstitutionName": "Systems_Neuroscience_UKE", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "Martinistrasse_52_Hamburg_Nord_DE_20246", + "DeviceSerialNumber": "167015", + "StationName": "MRC35041", + "BodyPartExamined": "RUECKENMARK", + "PatientPosition": "HFS", + "ProcedureStepDescription": "Systems_Neuroscience_projects", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "T1w", + "ProtocolName": "T1w", + "ScanningSequence": "GR_IR", + "SequenceVariant": "SK_SP_MP", + "ScanOptions": "IR", + "SequenceName": "_tfl3d1_16", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS3D", + "DIS2D" + ], + "SeriesNumber": 2, + "AcquisitionTime": "16:05:30.015000", + "AcquisitionNumber": 1, + "SliceThickness": 1, + "SAR": 0.0591286, + "EchoTime": 0.00372, + "RepetitionTime": 2, + "InversionTime": 1, + "FlipAngle": 9, + "PartialFourier": 1, + "BaseResolution": 320, + "ShimSetting": [ + -176, + -12030, + -11503, + 30, + -6, + -44, + 2, + 23 + ], + "TxRefAmp": 246.882, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC1-7;NC1,2", + "CoilString": "HC1-7;NC1_2", + "PulseSequenceDetails": "%SiemensSeq%_tfl", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 81.25, + "PhaseEncodingSteps": 259, + "AcquisitionMatrixPE": 260, + "ReconMatrixPE": 320, + "PixelBandwidth": 150, + "DwellTime": 1.04e-05, + "ImageOrientationPatientDICOM": [ + 0, + 1, + 0, + 0.0401318, + 0, + -0.999194 + ], + "InPlanePhaseEncodingDirectionDICOM": "ROW", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181125 (JP2:OpenJPEG) (JP-LS:CharLS) GCC5.5.0", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-hamburg04/anat/sub-hamburg04_space-other_T2star.json b/derivatives/data_preprocessed/sub-hamburg04/anat/sub-hamburg04_space-other_T2star.json index 0a087c0c66..8f69782de0 100644 --- a/derivatives/data_preprocessed/sub-hamburg04/anat/sub-hamburg04_space-other_T2star.json +++ b/derivatives/data_preprocessed/sub-hamburg04/anat/sub-hamburg04_space-other_T2star.json @@ -75,5 +75,9 @@ "InPlanePhaseEncodingDirectionDICOM": "COL", "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20181125 (JP2:OpenJPEG) (JP-LS:CharLS) GCC5.5.0", - "AcquisitionDuration": 285.0 + "AcquisitionDuration": 285.0, + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-hamburg04/anat/sub-hamburg04_space-other_T2w.json b/derivatives/data_preprocessed/sub-hamburg04/anat/sub-hamburg04_space-other_T2w.json index 7dad2ff29e..e1fa002c61 100644 --- a/derivatives/data_preprocessed/sub-hamburg04/anat/sub-hamburg04_space-other_T2w.json +++ b/derivatives/data_preprocessed/sub-hamburg04/anat/sub-hamburg04_space-other_T2w.json @@ -1,68 +1,81 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.247, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma_fit", - "InstitutionName": "Systems_Neuroscience_UKE", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "Martinistrasse_52_Hamburg_Nord_DE_20246", - "DeviceSerialNumber": "167015", - "StationName": "MRC35041", - "BodyPartExamined": "RUECKENMARK", - "PatientPosition": "HFS", - "ProcedureStepDescription": "Systems_Neuroscience_projects", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "T2w", - "ProtocolName": "T2w", - "ScanningSequence": "SE", - "SequenceVariant": "SK_SP_OSP", - "ScanOptions": "PFP", - "SequenceName": "_spcR_100", - "ImageType": 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"COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181125 (JP2:OpenJPEG) (JP-LS:CharLS) GCC5.5.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 123.247, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma_fit", + "InstitutionName": "Systems_Neuroscience_UKE", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "Martinistrasse_52_Hamburg_Nord_DE_20246", + "DeviceSerialNumber": "167015", + "StationName": "MRC35041", + "BodyPartExamined": "RUECKENMARK", + "PatientPosition": "HFS", + "ProcedureStepDescription": "Systems_Neuroscience_projects", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "T2w", + "ProtocolName": "T2w", + "ScanningSequence": "SE", + "SequenceVariant": "SK_SP_OSP", + "ScanOptions": "PFP", + "SequenceName": "_spcR_100", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS3D", + "DIS2D" + ], + "SeriesNumber": 3, + 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"v1.0.20181125 (JP2:OpenJPEG) (JP-LS:CharLS) GCC5.5.0", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-hamburg05/anat/sub-hamburg05_flip-1_mt-on_space-other_MTS.json b/derivatives/data_preprocessed/sub-hamburg05/anat/sub-hamburg05_flip-1_mt-on_space-other_MTS.json index 80ebc1f85f..0ea5a5a646 100644 --- a/derivatives/data_preprocessed/sub-hamburg05/anat/sub-hamburg05_flip-1_mt-on_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-hamburg05/anat/sub-hamburg05_flip-1_mt-on_space-other_MTS.json @@ -1,66 +1,76 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.247, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma_fit", - "InstitutionName": "Systems_Neuroscience_UKE", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "Martinistrasse_52_Hamburg_Nord_DE_20246", - "DeviceSerialNumber": "167015", - 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"syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-MT1", + "ProtocolName": "GRE-MT1", + "ScanningSequence": "GR", + "SequenceVariant": "MTC_SP", + "ScanOptions": "MT", + "SequenceName": "_fl3d1", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "DIS2D" + ], + "SeriesNumber": 5, + "AcquisitionTime": "16:48:49.932500", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SAR": 0.443254, + "EchoTime": 0.00313, + "RepetitionTime": 0.035, + "FlipAngle": 9, + "PartialFourier": 1, + "BaseResolution": 256, + "ShimSetting": [ + -185, + -12103, + -11466, + -1859, + -183, + 1820, + 76, + -35 + ], + "TxRefAmp": 260.276, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC5-7;NC1,2", + "CoilString": "HC5-7;NC1_2", + "PulseSequenceDetails": "%SiemensSeq%_gre", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 255, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "PixelBandwidth": 260, + "DwellTime": 7.5e-06, + "ImageOrientationPatientDICOM": [ + 1, + 0, + 0, + 0, + 0.996195, + 0.0871557 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181125 (JP2:OpenJPEG) (JP-LS:CharLS) GCC5.5.0", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-hamburg05/anat/sub-hamburg05_flip-2_mt-off_space-other_MTS.json b/derivatives/data_preprocessed/sub-hamburg05/anat/sub-hamburg05_flip-2_mt-off_space-other_MTS.json index 8e627266f3..f7c3d0016c 100644 --- a/derivatives/data_preprocessed/sub-hamburg05/anat/sub-hamburg05_flip-2_mt-off_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-hamburg05/anat/sub-hamburg05_flip-2_mt-off_space-other_MTS.json @@ -1,65 +1,75 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.247, - "Manufacturer": "Siemens", - "ManufacturersModelName": 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"N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 255, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "PixelBandwidth": 260, + "DwellTime": 7.5e-06, + "ImageOrientationPatientDICOM": [ + 1, + 0, + 0, + 0, + 0.996195, + 0.0871557 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181125 (JP2:OpenJPEG) (JP-LS:CharLS) GCC5.5.0", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-hamburg05/anat/sub-hamburg05_space-other_T1w.json b/derivatives/data_preprocessed/sub-hamburg05/anat/sub-hamburg05_space-other_T1w.json index 2cca6a7324..e290abaaed 100644 --- a/derivatives/data_preprocessed/sub-hamburg05/anat/sub-hamburg05_space-other_T1w.json +++ b/derivatives/data_preprocessed/sub-hamburg05/anat/sub-hamburg05_space-other_T1w.json @@ -1,67 +1,80 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.247, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma_fit", - "InstitutionName": "Systems_Neuroscience_UKE", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "Martinistrasse_52_Hamburg_Nord_DE_20246", - "DeviceSerialNumber": "167015", - "StationName": "MRC35041", - "BodyPartExamined": "RUECKENMARK", - "PatientPosition": "HFS", - "ProcedureStepDescription": "Systems_Neuroscience_projects", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "T1w", - "ProtocolName": "T1w", - "ScanningSequence": "GR_IR", - "SequenceVariant": "SK_SP_MP", - "ScanOptions": "IR", - "SequenceName": "_tfl3d1_16", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS3D", "DIS2D"], - "SeriesNumber": 2, - "AcquisitionTime": "16:34:47.045000", - "AcquisitionNumber": 1, - "SliceThickness": 1, - "SAR": 0.0467326, - "EchoTime": 0.00372, - "RepetitionTime": 2, - "InversionTime": 1, - "FlipAngle": 9, - 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"InstitutionalDepartmentName": "Department", + "InstitutionAddress": "Martinistrasse_52_Hamburg_Nord_DE_20246", + "DeviceSerialNumber": "167015", + "StationName": "MRC35041", + "BodyPartExamined": "RUECKENMARK", + "PatientPosition": "HFS", + "ProcedureStepDescription": "Systems_Neuroscience_projects", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "T1w", + "ProtocolName": "T1w", + "ScanningSequence": "GR_IR", + "SequenceVariant": "SK_SP_MP", + "ScanOptions": "IR", + "SequenceName": "_tfl3d1_16", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS3D", + "DIS2D" + ], + "SeriesNumber": 2, + "AcquisitionTime": "16:34:47.045000", + "AcquisitionNumber": 1, + "SliceThickness": 1, + "SAR": 0.0467326, + "EchoTime": 0.00372, + "RepetitionTime": 2, + "InversionTime": 1, + "FlipAngle": 9, + "PartialFourier": 1, + "BaseResolution": 320, + "ShimSetting": [ + -176, + -12030, + -11503, + 30, + -6, + -44, + 2, + 23 + ], + "TxRefAmp": 237.158, + 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a/derivatives/data_preprocessed/sub-hamburg05/anat/sub-hamburg05_space-other_T2star.json +++ b/derivatives/data_preprocessed/sub-hamburg05/anat/sub-hamburg05_space-other_T2star.json @@ -75,5 +75,9 @@ "InPlanePhaseEncodingDirectionDICOM": "COL", "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20181125 (JP2:OpenJPEG) (JP-LS:CharLS) GCC5.5.0", - "AcquisitionDuration": 285.0 + "AcquisitionDuration": 285.0, + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-hamburg05/anat/sub-hamburg05_space-other_T2w.json b/derivatives/data_preprocessed/sub-hamburg05/anat/sub-hamburg05_space-other_T2w.json index 8cf0c13abd..86cdad93a1 100644 --- a/derivatives/data_preprocessed/sub-hamburg05/anat/sub-hamburg05_space-other_T2w.json +++ b/derivatives/data_preprocessed/sub-hamburg05/anat/sub-hamburg05_space-other_T2w.json @@ -1,68 +1,81 @@ { - 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"Siemens", + "ManufacturersModelName": "Prisma_fit", + "InstitutionName": "Systems_Neuroscience_UKE", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "Martinistrasse_52_Hamburg_Nord_DE_20246", + "DeviceSerialNumber": "167015", + "StationName": "MRC35041", + "BodyPartExamined": "RUECKENMARK", + "PatientPosition": "HFS", + "ProcedureStepDescription": "Systems_Neuroscience_projects", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "T2w", + "ProtocolName": "T2w", + "ScanningSequence": "SE", + "SequenceVariant": "SK_SP_OSP", + "ScanOptions": "PFP", + "SequenceName": "_spcR_100", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS3D", + "DIS2D" + ], + "SeriesNumber": 3, + "AcquisitionTime": "16:40:3.057500", + "AcquisitionNumber": 1, + "SliceThickness": 0.8, + "SAR": 0.448158, + "EchoTime": 0.12, + "RepetitionTime": 1.5, + "FlipAngle": 120, + "PartialFourier": 1, + "BaseResolution": 320, + "ShimSetting": [ + -176, + -12030, + -11503, + 30, + -6, + -44, + 2, + 23 + ], + "TxRefAmp": 260.276, + "PhaseResolution": 1, + "PhaseOversampling": 0.8, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC5-7;NC1,2", + "CoilString": "HC5-7;NC1_2", + "PulseSequenceDetails": "%SiemensSeq%_tse_vfl", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "EchoTrainLength": 76, + "PhaseEncodingSteps": 422, + "AcquisitionMatrixPE": 320, + "ReconMatrixPE": 320, + "PixelBandwidth": 625, + "DwellTime": 2.5e-06, + "ImageOrientationPatientDICOM": [ + -2.14e-13, + 1, + 4.892e-12, + 0.0436194, + 4.897e-12, + -0.999048 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181125 (JP2:OpenJPEG) (JP-LS:CharLS) GCC5.5.0", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-hamburg06/anat/sub-hamburg06_flip-1_mt-on_space-other_MTS.json b/derivatives/data_preprocessed/sub-hamburg06/anat/sub-hamburg06_flip-1_mt-on_space-other_MTS.json index 43ba2cbb00..088d7af924 100644 --- a/derivatives/data_preprocessed/sub-hamburg06/anat/sub-hamburg06_flip-1_mt-on_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-hamburg06/anat/sub-hamburg06_flip-1_mt-on_space-other_MTS.json @@ -1,66 +1,76 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.247, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma_fit", - "InstitutionName": "Systems_Neuroscience_UKE", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "Martinistrasse_52_Hamburg_Nord_DE_20246", - "DeviceSerialNumber": "167015", - "StationName": "MRC35041", - "BodyPartExamined": "RUECKENMARK", - "PatientPosition": "HFS", - "ProcedureStepDescription": "Systems_Neuroscience_projects", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-MT1", - "ProtocolName": "GRE-MT1", - "ScanningSequence": "GR", - "SequenceVariant": "MTC_SP", - "ScanOptions": "MT", - "SequenceName": "_fl3d1", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "DIS2D"], - "SeriesNumber": 5, - "AcquisitionTime": "10:18:39.947500", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SAR": 0.729249, - "EchoTime": 0.00313, - "RepetitionTime": 0.035, - "FlipAngle": 9, - "PartialFourier": 1, - "BaseResolution": 256, - "ShimSetting": [ - -175, - -12098, - -11519, - -1409, - 143, - 2250, - -779, - -92 ], - "TxRefAmp": 342.425, - "PhaseResolution": 1, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC7;NC1,2", - "CoilString": "HC7;NC1_2", - "PulseSequenceDetails": "%SiemensSeq%_gre", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 100, - "PhaseEncodingSteps": 255, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 256, - "PixelBandwidth": 260, - 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"SequenceName": "_fl3d1", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "DIS2D" + ], + "SeriesNumber": 5, + "AcquisitionTime": "10:18:39.947500", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SAR": 0.729249, + "EchoTime": 0.00313, + "RepetitionTime": 0.035, + "FlipAngle": 9, + "PartialFourier": 1, + "BaseResolution": 256, + "ShimSetting": [ + -175, + -12098, + -11519, + -1409, + 143, + 2250, + -779, + -92 + ], + "TxRefAmp": 342.425, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC7;NC1,2", + "CoilString": "HC7;NC1_2", + "PulseSequenceDetails": "%SiemensSeq%_gre", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 255, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "PixelBandwidth": 260, + "DwellTime": 7.5e-06, + "ImageOrientationPatientDICOM": [ + 1, + 0, + 0, + 0, + 0.996041, + 0.0888943 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181125 (JP2:OpenJPEG) (JP-LS:CharLS) GCC5.5.0", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-hamburg06/anat/sub-hamburg06_flip-2_mt-off_space-other_MTS.json b/derivatives/data_preprocessed/sub-hamburg06/anat/sub-hamburg06_flip-2_mt-off_space-other_MTS.json index 4a6ce3e51e..2b2feea878 100644 --- a/derivatives/data_preprocessed/sub-hamburg06/anat/sub-hamburg06_flip-2_mt-off_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-hamburg06/anat/sub-hamburg06_flip-2_mt-off_space-other_MTS.json @@ -1,65 +1,75 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.247, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma_fit", - "InstitutionName": "Systems_Neuroscience_UKE", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "Martinistrasse_52_Hamburg_Nord_DE_20246", - "DeviceSerialNumber": "167015", - "StationName": "MRC35041", - "BodyPartExamined": "RUECKENMARK", - "PatientPosition": "HFS", - "ProcedureStepDescription": "Systems_Neuroscience_projects", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-T1w", - "ProtocolName": "GRE-T1w", - "ScanningSequence": "GR", - "SequenceVariant": "SP", - "SequenceName": "_fl3d1", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "DIS2D"], - "SeriesNumber": 7, - "AcquisitionTime": "10:23:5.935000", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SAR": 0.0472823, - "EchoTime": 0.00313, - "RepetitionTime": 0.015, - "FlipAngle": 15, - "PartialFourier": 1, - "BaseResolution": 256, - "ShimSetting": [ - -175, - -12098, - -11519, - -1409, - 143, - 2250, - -779, - -92 ], - "TxRefAmp": 342.425, - "PhaseResolution": 1, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC7;NC1,2", - "CoilString": "HC7;NC1_2", - "PulseSequenceDetails": "%SiemensSeq%_gre", - "ConsistencyInfo": 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"MRAcquisitionType": "3D", + "SeriesDescription": "GRE-T1w", + "ProtocolName": "GRE-T1w", + "ScanningSequence": "GR", + "SequenceVariant": "SP", + "SequenceName": "_fl3d1", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "DIS2D" + ], + "SeriesNumber": 7, + "AcquisitionTime": "10:23:5.935000", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SAR": 0.0472823, + "EchoTime": 0.00313, + "RepetitionTime": 0.015, + "FlipAngle": 15, + "PartialFourier": 1, + "BaseResolution": 256, + "ShimSetting": [ + -175, + -12098, + -11519, + -1409, + 143, + 2250, + -779, + -92 + ], + "TxRefAmp": 342.425, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC7;NC1,2", + "CoilString": "HC7;NC1_2", + "PulseSequenceDetails": "%SiemensSeq%_gre", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 255, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "PixelBandwidth": 260, + "DwellTime": 7.5e-06, + "ImageOrientationPatientDICOM": [ + 1, + 0, + 0, + 0, + 0.996041, + 0.0888943 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181125 (JP2:OpenJPEG) (JP-LS:CharLS) GCC5.5.0", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-hamburg06/anat/sub-hamburg06_space-other_T1w.json b/derivatives/data_preprocessed/sub-hamburg06/anat/sub-hamburg06_space-other_T1w.json index 1281294fb4..998f439147 100644 --- a/derivatives/data_preprocessed/sub-hamburg06/anat/sub-hamburg06_space-other_T1w.json +++ b/derivatives/data_preprocessed/sub-hamburg06/anat/sub-hamburg06_space-other_T1w.json @@ -1,67 +1,80 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.247, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma_fit", - "InstitutionName": "Systems_Neuroscience_UKE", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "Martinistrasse_52_Hamburg_Nord_DE_20246", - "DeviceSerialNumber": "167015", - "StationName": "MRC35041", - "BodyPartExamined": "RUECKENMARK", - "PatientPosition": "HFS", - "ProcedureStepDescription": "Systems_Neuroscience_projects", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "T1w", - "ProtocolName": "T1w", - "ScanningSequence": "GR_IR", - "SequenceVariant": "SK_SP_MP", - "ScanOptions": "IR", - "SequenceName": "_tfl3d1_16", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS3D", "DIS2D"], - "SeriesNumber": 2, - "AcquisitionTime": "10:05:30.020000", - "AcquisitionNumber": 1, - "SliceThickness": 1, - "SAR": 0.077035, - "EchoTime": 0.00372, - "RepetitionTime": 2, - "InversionTime": 1, - "FlipAngle": 9, - "PartialFourier": 1, - "BaseResolution": 320, - "ShimSetting": [ - -176, - -12030, - -11503, - 30, - -6, - -44, - 2, - 23 ], - "TxRefAmp": 304.543, - "PhaseResolution": 1, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC1-7;NC1,2", - "CoilString": "HC1-7;NC1_2", - "PulseSequenceDetails": "%SiemensSeq%_tfl", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 81.25, - "PhaseEncodingSteps": 259, - "AcquisitionMatrixPE": 260, - "ReconMatrixPE": 320, - "PixelBandwidth": 150, - "DwellTime": 1.04e-05, - "ImageOrientationPatientDICOM": [ - 0, - 1, - 0, - 0, - 0, - -1 ], - "InPlanePhaseEncodingDirectionDICOM": "ROW", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181125 (JP2:OpenJPEG) (JP-LS:CharLS) GCC5.5.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 123.247, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma_fit", + "InstitutionName": "Systems_Neuroscience_UKE", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "Martinistrasse_52_Hamburg_Nord_DE_20246", + "DeviceSerialNumber": "167015", + "StationName": "MRC35041", + "BodyPartExamined": "RUECKENMARK", + "PatientPosition": "HFS", + "ProcedureStepDescription": "Systems_Neuroscience_projects", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "T1w", + "ProtocolName": "T1w", + "ScanningSequence": "GR_IR", + "SequenceVariant": "SK_SP_MP", + "ScanOptions": "IR", + "SequenceName": "_tfl3d1_16", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS3D", + "DIS2D" + ], + "SeriesNumber": 2, + "AcquisitionTime": "10:05:30.020000", + "AcquisitionNumber": 1, + "SliceThickness": 1, + "SAR": 0.077035, + "EchoTime": 0.00372, + "RepetitionTime": 2, + "InversionTime": 1, + "FlipAngle": 9, + "PartialFourier": 1, + "BaseResolution": 320, + "ShimSetting": [ + -176, + -12030, + -11503, + 30, + -6, + -44, + 2, + 23 + ], + "TxRefAmp": 304.543, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC1-7;NC1,2", + "CoilString": "HC1-7;NC1_2", + "PulseSequenceDetails": "%SiemensSeq%_tfl", + 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"InPlanePhaseEncodingDirectionDICOM": "COL", "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20181125 (JP2:OpenJPEG) (JP-LS:CharLS) GCC5.5.0", - "AcquisitionDuration": 285.0 + "AcquisitionDuration": 285.0, + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-hamburg06/anat/sub-hamburg06_space-other_T2w.json b/derivatives/data_preprocessed/sub-hamburg06/anat/sub-hamburg06_space-other_T2w.json index 8f63766367..e5b2d93b0f 100644 --- a/derivatives/data_preprocessed/sub-hamburg06/anat/sub-hamburg06_space-other_T2w.json +++ b/derivatives/data_preprocessed/sub-hamburg06/anat/sub-hamburg06_space-other_T2w.json @@ -1,68 +1,81 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.247, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma_fit", - "InstitutionName": "Systems_Neuroscience_UKE", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "Martinistrasse_52_Hamburg_Nord_DE_20246", - "DeviceSerialNumber": "167015", - "StationName": "MRC35041", - "BodyPartExamined": "RUECKENMARK", - "PatientPosition": "HFS", - "ProcedureStepDescription": "Systems_Neuroscience_projects", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "T2w", - "ProtocolName": "T2w", - "ScanningSequence": "SE", - "SequenceVariant": "SK_SP_OSP", - "ScanOptions": "PFP", - "SequenceName": "_spcR_100", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS3D", "DIS2D"], - "SeriesNumber": 3, - "AcquisitionTime": "10:10:29.002500", - "AcquisitionNumber": 1, - "SliceThickness": 0.8, - "SAR": 0.737317, - "EchoTime": 0.12, - "RepetitionTime": 1.5, - "FlipAngle": 120, - "PartialFourier": 1, - "BaseResolution": 320, - "ShimSetting": [ - -176, - -12030, - -11503, - 30, - -6, - -44, - 2, - 23 ], - "TxRefAmp": 342.425, - "PhaseResolution": 1, - 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"DeviceSerialNumber": "167015", + "StationName": "MRC35041", + "BodyPartExamined": "RUECKENMARK", + "PatientPosition": "HFS", + "ProcedureStepDescription": "Systems_Neuroscience_projects", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "T2w", + "ProtocolName": "T2w", + "ScanningSequence": "SE", + "SequenceVariant": "SK_SP_OSP", + "ScanOptions": "PFP", + "SequenceName": "_spcR_100", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS3D", + "DIS2D" + ], + "SeriesNumber": 3, + "AcquisitionTime": "10:10:29.002500", + "AcquisitionNumber": 1, + "SliceThickness": 0.8, + "SAR": 0.737317, + "EchoTime": 0.12, + "RepetitionTime": 1.5, + "FlipAngle": 120, + "PartialFourier": 1, + "BaseResolution": 320, + "ShimSetting": [ + -176, + -12030, + -11503, + 30, + -6, + -44, + 2, + 23 + ], + "TxRefAmp": 342.425, + "PhaseResolution": 1, + "PhaseOversampling": 0.8, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC5-7;NC1,2", + "CoilString": "HC5-7;NC1_2", + "PulseSequenceDetails": "%SiemensSeq%_tse_vfl", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "EchoTrainLength": 76, + "PhaseEncodingSteps": 422, + "AcquisitionMatrixPE": 320, + "ReconMatrixPE": 320, + "PixelBandwidth": 625, + "DwellTime": 2.5e-06, + "ImageOrientationPatientDICOM": [ + 0, + 1, + 4.897e-12, + 0, + 4.897e-12, + -1 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181125 (JP2:OpenJPEG) (JP-LS:CharLS) GCC5.5.0", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-juntendo750w01/anat/sub-juntendo750w01_flip-1_mt-on_space-other_MTS.json b/derivatives/data_preprocessed/sub-juntendo750w01/anat/sub-juntendo750w01_flip-1_mt-on_space-other_MTS.json index 2c46599e3f..34b2ea553a 100644 --- a/derivatives/data_preprocessed/sub-juntendo750w01/anat/sub-juntendo750w01_flip-1_mt-on_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-juntendo750w01/anat/sub-juntendo750w01_flip-1_mt-on_space-other_MTS.json @@ -1,42 +1,50 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "GE", - "ManufacturersModelName": "DISCOVERY_MR750w", - "InstitutionName": "JUNTENDO_UNV_HP", - "DeviceSerialNumber": "0000000000EM0236", - "StationName": "GEMR750W", - "BodyPartExamined": "NECK", - "PatientPosition": "HFS", - "SoftwareVersions": "27_LX_MR_Software_release:DV26.0_R02_1810.b", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-MT1", - "ProtocolName": "GRE-MT1", - "ScanningSequence": "GR", - "SequenceVariant": "SS_SP", - "ScanOptions": "EDR_GEMS_MT_GEMS_FILTERED_GEMS_PFF", - "ImageType": ["ORIGINAL", "PRIMARY", "OTHER"], - "SeriesNumber": 8, - "AcquisitionTime": "20:21:35.000000", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SpacingBetweenSlices": 5, - "SAR": 0.987032, - "EchoTime": 0.004, - "RepetitionTime": 0.047, - "FlipAngle": 9, - "PercentPhaseFOV": 100, - "AcquisitionMatrixPE": 192, - "ReconMatrixPE": 192, - "PixelBandwidth": 434.062, - "ImageOrientationPatientDICOM": [ - 0.99969, - 0.00218, - 0.02465, - -0.00829, - 0.96814, - 0.25028 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20171215 (OpenJPEG build) Clang8.1.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "GE", + "ManufacturersModelName": "DISCOVERY_MR750w", + "InstitutionName": "JUNTENDO_UNV_HP", + "DeviceSerialNumber": "0000000000EM0236", + "StationName": "GEMR750W", + "BodyPartExamined": "NECK", + "PatientPosition": "HFS", + "SoftwareVersions": "27_LX_MR_Software_release:DV26.0_R02_1810.b", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-MT1", + "ProtocolName": "GRE-MT1", + "ScanningSequence": "GR", + "SequenceVariant": "SS_SP", + "ScanOptions": "EDR_GEMS_MT_GEMS_FILTERED_GEMS_PFF", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "OTHER" + ], + "SeriesNumber": 8, + "AcquisitionTime": "20:21:35.000000", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SpacingBetweenSlices": 5, + "SAR": 0.987032, + "EchoTime": 0.004, + "RepetitionTime": 0.047, + "FlipAngle": 9, + "PercentPhaseFOV": 100, + "AcquisitionMatrixPE": 192, + "ReconMatrixPE": 192, + "PixelBandwidth": 434.062, + "ImageOrientationPatientDICOM": [ + 0.99969, + 0.00218, + 0.02465, + -0.00829, + 0.96814, + 0.25028 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20171215 (OpenJPEG build) Clang8.1.0", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-juntendo750w01/anat/sub-juntendo750w01_flip-2_mt-off_space-other_MTS.json b/derivatives/data_preprocessed/sub-juntendo750w01/anat/sub-juntendo750w01_flip-2_mt-off_space-other_MTS.json index e4754fb9eb..f93366d506 100644 --- a/derivatives/data_preprocessed/sub-juntendo750w01/anat/sub-juntendo750w01_flip-2_mt-off_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-juntendo750w01/anat/sub-juntendo750w01_flip-2_mt-off_space-other_MTS.json @@ -1,42 +1,50 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "GE", - "ManufacturersModelName": "DISCOVERY_MR750w", - "InstitutionName": "JUNTENDO_UNV_HP", - "DeviceSerialNumber": "0000000000EM0236", - "StationName": "GEMR750W", - "BodyPartExamined": "NECK", - "PatientPosition": "HFS", - "SoftwareVersions": "27_LX_MR_Software_release:DV26.0_R02_1810.b", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-T1w", - "ProtocolName": "GRE-T1w", - "ScanningSequence": "GR", - "SequenceVariant": "SS_SP", - "ScanOptions": "EDR_GEMS_FILTERED_GEMS_PFF", - "ImageType": ["ORIGINAL", "PRIMARY", 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a/derivatives/data_preprocessed/sub-juntendo750w01/anat/sub-juntendo750w01_space-other_T1w.json b/derivatives/data_preprocessed/sub-juntendo750w01/anat/sub-juntendo750w01_space-other_T1w.json index a937fa1681..face4946b5 100644 --- a/derivatives/data_preprocessed/sub-juntendo750w01/anat/sub-juntendo750w01_space-other_T1w.json +++ b/derivatives/data_preprocessed/sub-juntendo750w01/anat/sub-juntendo750w01_space-other_T1w.json @@ -1,43 +1,52 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "GE", - "ManufacturersModelName": "DISCOVERY_MR750w", - "InstitutionName": "JUNTENDO_UNV_HP", - "DeviceSerialNumber": "0000000000EM0236", - "StationName": "GEMR750W", - "BodyPartExamined": "CSPINE", - "PatientPosition": "HFS", - "SoftwareVersions": "27_LX_MR_Software_release:DV26.0_R02_1810.b", - "MRAcquisitionType": "3D", - "SeriesDescription": "T1w", - "ProtocolName": "T1w", - "ScanningSequence": "GR", - "SequenceVariant": "SS_SP_SK", - "ScanOptions": "FAST_GEMS_EDR_GEMS_FILTERED_GEMS_ACC_GEMS_PFF_IR_GEMS", - "ImageType": ["ORIGINAL", "PRIMARY", "OTHER"], - "SeriesNumber": 4, - "AcquisitionTime": "20:05:1.000000", - "AcquisitionNumber": 1, - "SliceThickness": 1, - "SpacingBetweenSlices": 1, - "SAR": 0.115603, - "EchoTime": 0.00128, - "RepetitionTime": 0.003816, - "InversionTime": 1, - "FlipAngle": 9, - "PercentPhaseFOV": 80, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 320, - "PixelBandwidth": 892.875, - "ImageOrientationPatientDICOM": [ - -0.03655, - 0.99933, - 0.00052, - 0.02469, - 0.00142, - -0.99969 ], - "InPlanePhaseEncodingDirectionDICOM": "ROW", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20171215 (OpenJPEG build) Clang8.1.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "GE", + "ManufacturersModelName": "DISCOVERY_MR750w", + "InstitutionName": "JUNTENDO_UNV_HP", + "DeviceSerialNumber": "0000000000EM0236", + "StationName": "GEMR750W", + "BodyPartExamined": "CSPINE", + "PatientPosition": "HFS", + "SoftwareVersions": "27_LX_MR_Software_release:DV26.0_R02_1810.b", + "MRAcquisitionType": "3D", + "SeriesDescription": "T1w", + "ProtocolName": "T1w", + "ScanningSequence": "GR", + "SequenceVariant": "SS_SP_SK", + "ScanOptions": "FAST_GEMS_EDR_GEMS_FILTERED_GEMS_ACC_GEMS_PFF_IR_GEMS", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "OTHER" + ], + "SeriesNumber": 4, + "AcquisitionTime": "20:05:1.000000", + "AcquisitionNumber": 1, + "SliceThickness": 1, + "SpacingBetweenSlices": 1, + "SAR": 0.115603, + "EchoTime": 0.00128, + "RepetitionTime": 0.003816, + "InversionTime": 1, + "FlipAngle": 9, + "PercentPhaseFOV": 80, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 320, + "PixelBandwidth": 892.875, + "ImageOrientationPatientDICOM": [ + -0.03655, + 0.99933, + 0.00052, + 0.02469, + 0.00142, + -0.99969 + ], + "InPlanePhaseEncodingDirectionDICOM": "ROW", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20171215 (OpenJPEG build) Clang8.1.0", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-juntendo750w01/anat/sub-juntendo750w01_space-other_T2star.json b/derivatives/data_preprocessed/sub-juntendo750w01/anat/sub-juntendo750w01_space-other_T2star.json index 3abbe994e5..cfe100b600 100644 --- a/derivatives/data_preprocessed/sub-juntendo750w01/anat/sub-juntendo750w01_space-other_T2star.json +++ b/derivatives/data_preprocessed/sub-juntendo750w01/anat/sub-juntendo750w01_space-other_T2star.json @@ -45,5 +45,9 @@ "InPlanePhaseEncodingDirectionDICOM": "COL", "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20171215 (OpenJPEG build) Clang8.1.0", - "AcquisitionDuration": 288.0 + "AcquisitionDuration": 288.0, + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-juntendo750w01/anat/sub-juntendo750w01_space-other_T2w.json b/derivatives/data_preprocessed/sub-juntendo750w01/anat/sub-juntendo750w01_space-other_T2w.json index d3ab20b963..2d820ffdaf 100644 --- a/derivatives/data_preprocessed/sub-juntendo750w01/anat/sub-juntendo750w01_space-other_T2w.json +++ b/derivatives/data_preprocessed/sub-juntendo750w01/anat/sub-juntendo750w01_space-other_T2w.json @@ -1,43 +1,52 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "GE", - "ManufacturersModelName": "DISCOVERY_MR750w", - "InstitutionName": "JUNTENDO_UNV_HP", - "DeviceSerialNumber": "0000000000EM0236", - "StationName": "GEMR750W", - "BodyPartExamined": "CSPINE", - "PatientPosition": "HFS", - "SoftwareVersions": "27_LX_MR_Software_release:DV26.0_R02_1810.b", - "MRAcquisitionType": "3D", - "SeriesDescription": "T2w", - "ProtocolName": "T2w", - "ScanningSequence": "SE", - "SequenceVariant": "SK_OSP", - "ScanOptions": "FC_FREQ_AX_GEMS_FC_NPW_EDR_GEMS_FILTERED_GEMS_ACC_GEMS", - "ImageType": ["ORIGINAL", "PRIMARY", "OTHER"], - "SeriesNumber": 6, - "AcquisitionTime": "20:11:39.000000", - "AcquisitionNumber": 1, - "SliceThickness": 0.8, - "SpacingBetweenSlices": 0.8, - "SAR": 0.3191, - "EchoTime": 0.134243, - "RepetitionTime": 2.502, - "FlipAngle": 90, - "PercentPhaseFOV": 100, - "EchoTrainLength": 78, - "AcquisitionMatrixPE": 320, - "ReconMatrixPE": 320, - "PixelBandwidth": 520.812, - "ImageOrientationPatientDICOM": [ - -0.05192, - 0.99865, - 0.00015, - 0.01273, - 0.00081, - -0.99992 ], - "InPlanePhaseEncodingDirectionDICOM": "ROW", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20171215 (OpenJPEG build) Clang8.1.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "GE", + "ManufacturersModelName": "DISCOVERY_MR750w", + "InstitutionName": "JUNTENDO_UNV_HP", + "DeviceSerialNumber": "0000000000EM0236", + "StationName": "GEMR750W", + "BodyPartExamined": "CSPINE", + "PatientPosition": "HFS", + "SoftwareVersions": "27_LX_MR_Software_release:DV26.0_R02_1810.b", + "MRAcquisitionType": "3D", + "SeriesDescription": "T2w", + "ProtocolName": "T2w", + "ScanningSequence": "SE", + "SequenceVariant": "SK_OSP", + "ScanOptions": "FC_FREQ_AX_GEMS_FC_NPW_EDR_GEMS_FILTERED_GEMS_ACC_GEMS", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "OTHER" + ], + "SeriesNumber": 6, + "AcquisitionTime": "20:11:39.000000", + "AcquisitionNumber": 1, + "SliceThickness": 0.8, + "SpacingBetweenSlices": 0.8, + "SAR": 0.3191, + "EchoTime": 0.134243, + "RepetitionTime": 2.502, + "FlipAngle": 90, + "PercentPhaseFOV": 100, + "EchoTrainLength": 78, + "AcquisitionMatrixPE": 320, + "ReconMatrixPE": 320, + "PixelBandwidth": 520.812, + "ImageOrientationPatientDICOM": [ + -0.05192, + 0.99865, + 0.00015, + 0.01273, + 0.00081, + -0.99992 + ], + "InPlanePhaseEncodingDirectionDICOM": "ROW", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20171215 (OpenJPEG build) Clang8.1.0", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-juntendo750w02/anat/sub-juntendo750w02_flip-1_mt-on_space-other_MTS.json b/derivatives/data_preprocessed/sub-juntendo750w02/anat/sub-juntendo750w02_flip-1_mt-on_space-other_MTS.json index 3a3998bbe8..727216b539 100644 --- a/derivatives/data_preprocessed/sub-juntendo750w02/anat/sub-juntendo750w02_flip-1_mt-on_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-juntendo750w02/anat/sub-juntendo750w02_flip-1_mt-on_space-other_MTS.json @@ -1,42 +1,50 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "GE", - "ManufacturersModelName": "DISCOVERY_MR750w", - "InstitutionName": "JUNTENDO_UNV_HP", - "DeviceSerialNumber": "0000000000EM0236", - "StationName": "GEMR750W", - "BodyPartExamined": "NECK", - "PatientPosition": "HFS", - "SoftwareVersions": "27_LX_MR_Software_release:DV26.0_R02_1810.b", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-MT1", - "ProtocolName": "GRE-MT1", - "ScanningSequence": "GR", - "SequenceVariant": "SS_SP", - "ScanOptions": "EDR_GEMS_MT_GEMS_FILTERED_GEMS_PFF", - "ImageType": ["ORIGINAL", "PRIMARY", "OTHER"], - "SeriesNumber": 8, - "AcquisitionTime": "19:36:37.000000", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SpacingBetweenSlices": 5, - "SAR": 0.951492, - "EchoTime": 0.004, - "RepetitionTime": 0.047, - "FlipAngle": 9, - "PercentPhaseFOV": 100, - "AcquisitionMatrixPE": 192, - "ReconMatrixPE": 192, - "PixelBandwidth": 434.062, - "ImageOrientationPatientDICOM": [ - 0.99686, - 0.03462, - -0.07127, - -0.01023, - 0.9482, - 0.3175 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20171215 (OpenJPEG build) Clang8.1.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "GE", + "ManufacturersModelName": "DISCOVERY_MR750w", + "InstitutionName": "JUNTENDO_UNV_HP", + "DeviceSerialNumber": "0000000000EM0236", + "StationName": "GEMR750W", + "BodyPartExamined": "NECK", + "PatientPosition": "HFS", + "SoftwareVersions": "27_LX_MR_Software_release:DV26.0_R02_1810.b", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-MT1", + "ProtocolName": "GRE-MT1", + "ScanningSequence": "GR", + "SequenceVariant": "SS_SP", + "ScanOptions": "EDR_GEMS_MT_GEMS_FILTERED_GEMS_PFF", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "OTHER" + ], + "SeriesNumber": 8, + "AcquisitionTime": "19:36:37.000000", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SpacingBetweenSlices": 5, + "SAR": 0.951492, + "EchoTime": 0.004, + "RepetitionTime": 0.047, + "FlipAngle": 9, + "PercentPhaseFOV": 100, + "AcquisitionMatrixPE": 192, + "ReconMatrixPE": 192, + "PixelBandwidth": 434.062, + "ImageOrientationPatientDICOM": [ + 0.99686, + 0.03462, + -0.07127, + -0.01023, + 0.9482, + 0.3175 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20171215 (OpenJPEG build) Clang8.1.0", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-juntendo750w02/anat/sub-juntendo750w02_flip-2_mt-off_space-other_MTS.json b/derivatives/data_preprocessed/sub-juntendo750w02/anat/sub-juntendo750w02_flip-2_mt-off_space-other_MTS.json index ab4799d860..c3f2b7a5ea 100644 --- a/derivatives/data_preprocessed/sub-juntendo750w02/anat/sub-juntendo750w02_flip-2_mt-off_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-juntendo750w02/anat/sub-juntendo750w02_flip-2_mt-off_space-other_MTS.json @@ -1,42 +1,50 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "GE", - "ManufacturersModelName": "DISCOVERY_MR750w", - "InstitutionName": "JUNTENDO_UNV_HP", - "DeviceSerialNumber": "0000000000EM0236", - "StationName": "GEMR750W", - "BodyPartExamined": "NECK", - "PatientPosition": "HFS", - "SoftwareVersions": "27_LX_MR_Software_release:DV26.0_R02_1810.b", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-T1w", - "ProtocolName": "GRE-T1w", - "ScanningSequence": "GR", - "SequenceVariant": "SS_SP", - "ScanOptions": "EDR_GEMS_FILTERED_GEMS_PFF", - "ImageType": ["ORIGINAL", "PRIMARY", "OTHER"], - "SeriesNumber": 10, - "AcquisitionTime": "19:48:0.000000", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SpacingBetweenSlices": 5, - "SAR": 0.0205551, - "EchoTime": 0.004, - "RepetitionTime": 0.015, - "FlipAngle": 15, - "PercentPhaseFOV": 100, - "AcquisitionMatrixPE": 192, - "ReconMatrixPE": 192, - "PixelBandwidth": 434.062, - "ImageOrientationPatientDICOM": [ - 0.99686, - 0.03462, - -0.07127, - -0.01023, - 0.9482, - 0.3175 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20171215 (OpenJPEG build) Clang8.1.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "GE", + "ManufacturersModelName": "DISCOVERY_MR750w", + "InstitutionName": "JUNTENDO_UNV_HP", + "DeviceSerialNumber": "0000000000EM0236", + "StationName": "GEMR750W", + "BodyPartExamined": "NECK", + "PatientPosition": "HFS", + "SoftwareVersions": "27_LX_MR_Software_release:DV26.0_R02_1810.b", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-T1w", + "ProtocolName": "GRE-T1w", + "ScanningSequence": "GR", + "SequenceVariant": "SS_SP", + "ScanOptions": "EDR_GEMS_FILTERED_GEMS_PFF", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "OTHER" + ], + "SeriesNumber": 10, + "AcquisitionTime": "19:48:0.000000", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SpacingBetweenSlices": 5, + "SAR": 0.0205551, + "EchoTime": 0.004, + "RepetitionTime": 0.015, + "FlipAngle": 15, + "PercentPhaseFOV": 100, + "AcquisitionMatrixPE": 192, + "ReconMatrixPE": 192, + "PixelBandwidth": 434.062, + "ImageOrientationPatientDICOM": [ + 0.99686, + 0.03462, + -0.07127, + -0.01023, + 0.9482, + 0.3175 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20171215 (OpenJPEG build) Clang8.1.0", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-juntendo750w02/anat/sub-juntendo750w02_space-other_T1w.json b/derivatives/data_preprocessed/sub-juntendo750w02/anat/sub-juntendo750w02_space-other_T1w.json index 4874abf5a8..d1bdd83b2c 100644 --- a/derivatives/data_preprocessed/sub-juntendo750w02/anat/sub-juntendo750w02_space-other_T1w.json +++ b/derivatives/data_preprocessed/sub-juntendo750w02/anat/sub-juntendo750w02_space-other_T1w.json @@ -1,43 +1,52 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "GE", - "ManufacturersModelName": "DISCOVERY_MR750w", - "InstitutionName": "JUNTENDO_UNV_HP", - "DeviceSerialNumber": "0000000000EM0236", - "StationName": "GEMR750W", - "BodyPartExamined": "CSPINE", - "PatientPosition": "HFS", - "SoftwareVersions": "27_LX_MR_Software_release:DV26.0_R02_1810.b", - "MRAcquisitionType": "3D", - "SeriesDescription": "T1w", - "ProtocolName": "T1w", - "ScanningSequence": "GR", - "SequenceVariant": "SS_SP_SK", - "ScanOptions": "FAST_GEMS_EDR_GEMS_FILTERED_GEMS_ACC_GEMS_PFF_IR_GEMS", - "ImageType": ["ORIGINAL", "PRIMARY", "OTHER"], - "SeriesNumber": 4, - "AcquisitionTime": "19:20:1.000000", - "AcquisitionNumber": 1, - "SliceThickness": 1, - "SpacingBetweenSlices": 1, - "SAR": 0.114869, - "EchoTime": 0.00128, - "RepetitionTime": 0.003792, - "InversionTime": 1, - "FlipAngle": 9, - "PercentPhaseFOV": 80, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 320, - "PixelBandwidth": 892.875, - "ImageOrientationPatientDICOM": [ - -0.0058, - 0.99998, - 0.00078, - -0.02739, - 0.00062, - -0.99962 ], - "InPlanePhaseEncodingDirectionDICOM": "ROW", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20171215 (OpenJPEG build) Clang8.1.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "GE", + "ManufacturersModelName": "DISCOVERY_MR750w", + "InstitutionName": "JUNTENDO_UNV_HP", + "DeviceSerialNumber": "0000000000EM0236", + "StationName": "GEMR750W", + "BodyPartExamined": "CSPINE", + "PatientPosition": "HFS", + "SoftwareVersions": "27_LX_MR_Software_release:DV26.0_R02_1810.b", + "MRAcquisitionType": "3D", + "SeriesDescription": "T1w", + "ProtocolName": "T1w", + "ScanningSequence": "GR", + "SequenceVariant": "SS_SP_SK", + "ScanOptions": "FAST_GEMS_EDR_GEMS_FILTERED_GEMS_ACC_GEMS_PFF_IR_GEMS", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "OTHER" + ], + "SeriesNumber": 4, + "AcquisitionTime": "19:20:1.000000", + "AcquisitionNumber": 1, + "SliceThickness": 1, + "SpacingBetweenSlices": 1, + "SAR": 0.114869, + "EchoTime": 0.00128, + "RepetitionTime": 0.003792, + "InversionTime": 1, + "FlipAngle": 9, + "PercentPhaseFOV": 80, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 320, + "PixelBandwidth": 892.875, + "ImageOrientationPatientDICOM": [ + -0.0058, + 0.99998, + 0.00078, + -0.02739, + 0.00062, + -0.99962 + ], + "InPlanePhaseEncodingDirectionDICOM": "ROW", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20171215 (OpenJPEG build) Clang8.1.0", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-juntendo750w02/anat/sub-juntendo750w02_space-other_T2star.json b/derivatives/data_preprocessed/sub-juntendo750w02/anat/sub-juntendo750w02_space-other_T2star.json index 1b73a0d5a4..4518364180 100644 --- a/derivatives/data_preprocessed/sub-juntendo750w02/anat/sub-juntendo750w02_space-other_T2star.json +++ b/derivatives/data_preprocessed/sub-juntendo750w02/anat/sub-juntendo750w02_space-other_T2star.json @@ -45,5 +45,9 @@ "InPlanePhaseEncodingDirectionDICOM": "COL", "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20171215 (OpenJPEG build) Clang8.1.0", - "AcquisitionDuration": 288.0 + "AcquisitionDuration": 288.0, + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-juntendo750w02/anat/sub-juntendo750w02_space-other_T2w.json b/derivatives/data_preprocessed/sub-juntendo750w02/anat/sub-juntendo750w02_space-other_T2w.json index 9f059ac980..e4191a085f 100644 --- a/derivatives/data_preprocessed/sub-juntendo750w02/anat/sub-juntendo750w02_space-other_T2w.json +++ b/derivatives/data_preprocessed/sub-juntendo750w02/anat/sub-juntendo750w02_space-other_T2w.json @@ -1,43 +1,52 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "GE", - "ManufacturersModelName": "DISCOVERY_MR750w", - "InstitutionName": "JUNTENDO_UNV_HP", - "DeviceSerialNumber": "0000000000EM0236", - "StationName": "GEMR750W", - "BodyPartExamined": "CSPINE", - "PatientPosition": "HFS", - "SoftwareVersions": "27_LX_MR_Software_release:DV26.0_R02_1810.b", - "MRAcquisitionType": "3D", - "SeriesDescription": "T2w", - "ProtocolName": "T2w", - "ScanningSequence": "SE", - "SequenceVariant": "SK_OSP", - "ScanOptions": "FC_FREQ_AX_GEMS_FC_NPW_EDR_GEMS_FILTERED_GEMS_ACC_GEMS", - "ImageType": ["ORIGINAL", "PRIMARY", "OTHER"], - "SeriesNumber": 6, - "AcquisitionTime": "19:26:50.000000", - "AcquisitionNumber": 1, - "SliceThickness": 0.8, - "SpacingBetweenSlices": 0.8, - "SAR": 0.3549, - "EchoTime": 0.135657, - "RepetitionTime": 2.502, - "FlipAngle": 90, - "PercentPhaseFOV": 100, - "EchoTrainLength": 78, - "AcquisitionMatrixPE": 320, - "ReconMatrixPE": 320, - "PixelBandwidth": 520.812, - "ImageOrientationPatientDICOM": [ - -0.01253, - 0.99992, - 0.00081, - -0.03545, - 0.00036, - -0.99937 ], - "InPlanePhaseEncodingDirectionDICOM": "ROW", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20171215 (OpenJPEG build) Clang8.1.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "GE", + "ManufacturersModelName": "DISCOVERY_MR750w", + "InstitutionName": "JUNTENDO_UNV_HP", + "DeviceSerialNumber": "0000000000EM0236", + "StationName": "GEMR750W", + "BodyPartExamined": "CSPINE", + "PatientPosition": "HFS", + "SoftwareVersions": "27_LX_MR_Software_release:DV26.0_R02_1810.b", + "MRAcquisitionType": "3D", + "SeriesDescription": "T2w", + "ProtocolName": "T2w", + "ScanningSequence": "SE", + "SequenceVariant": "SK_OSP", + "ScanOptions": "FC_FREQ_AX_GEMS_FC_NPW_EDR_GEMS_FILTERED_GEMS_ACC_GEMS", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "OTHER" + ], + "SeriesNumber": 6, + "AcquisitionTime": "19:26:50.000000", + "AcquisitionNumber": 1, + "SliceThickness": 0.8, + "SpacingBetweenSlices": 0.8, + "SAR": 0.3549, + "EchoTime": 0.135657, + "RepetitionTime": 2.502, + "FlipAngle": 90, + "PercentPhaseFOV": 100, + "EchoTrainLength": 78, + "AcquisitionMatrixPE": 320, + "ReconMatrixPE": 320, + "PixelBandwidth": 520.812, + "ImageOrientationPatientDICOM": [ + -0.01253, + 0.99992, + 0.00081, + -0.03545, + 0.00036, + -0.99937 + ], + "InPlanePhaseEncodingDirectionDICOM": "ROW", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20171215 (OpenJPEG build) Clang8.1.0", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-juntendo750w03/anat/sub-juntendo750w03_flip-1_mt-on_space-other_MTS.json b/derivatives/data_preprocessed/sub-juntendo750w03/anat/sub-juntendo750w03_flip-1_mt-on_space-other_MTS.json index d9258cadcc..8c6d620dde 100644 --- a/derivatives/data_preprocessed/sub-juntendo750w03/anat/sub-juntendo750w03_flip-1_mt-on_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-juntendo750w03/anat/sub-juntendo750w03_flip-1_mt-on_space-other_MTS.json @@ -1,42 +1,50 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "GE", - "ManufacturersModelName": "DISCOVERY_MR750w", - "InstitutionName": "JUNTENDO_UNV_HP", - "DeviceSerialNumber": "0000000000EM0236", - "StationName": "GEMR750W", - "BodyPartExamined": "NECK", - "PatientPosition": "HFS", - "SoftwareVersions": "27_LX_MR_Software_release:DV26.0_R02_1810.b", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-MT1", - "ProtocolName": "GRE-MT1", - "ScanningSequence": "GR", - "SequenceVariant": "SS_SP", - "ScanOptions": "EDR_GEMS_MT_GEMS_FILTERED_GEMS_PFF", - "ImageType": ["ORIGINAL", "PRIMARY", "OTHER"], - "SeriesNumber": 10, - "AcquisitionTime": "19:22:31.000000", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SpacingBetweenSlices": 5, - "SAR": 1.02926, - "EchoTime": 0.004, - "RepetitionTime": 0.047, - "FlipAngle": 9, - "PercentPhaseFOV": 100, - "AcquisitionMatrixPE": 192, - "ReconMatrixPE": 192, - "PixelBandwidth": 434.062, - "ImageOrientationPatientDICOM": [ - 0.99969, - 0.00414, - 0.0244, - -0.00829, - 0.98499, - 0.1724 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20171215 (OpenJPEG build) Clang8.1.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "GE", + "ManufacturersModelName": "DISCOVERY_MR750w", + "InstitutionName": "JUNTENDO_UNV_HP", + "DeviceSerialNumber": "0000000000EM0236", + "StationName": "GEMR750W", + "BodyPartExamined": "NECK", + "PatientPosition": "HFS", + "SoftwareVersions": "27_LX_MR_Software_release:DV26.0_R02_1810.b", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-MT1", + "ProtocolName": "GRE-MT1", + "ScanningSequence": "GR", + "SequenceVariant": "SS_SP", + "ScanOptions": "EDR_GEMS_MT_GEMS_FILTERED_GEMS_PFF", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "OTHER" + ], + "SeriesNumber": 10, + "AcquisitionTime": "19:22:31.000000", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SpacingBetweenSlices": 5, + "SAR": 1.02926, + "EchoTime": 0.004, + "RepetitionTime": 0.047, + "FlipAngle": 9, + "PercentPhaseFOV": 100, + "AcquisitionMatrixPE": 192, + "ReconMatrixPE": 192, + "PixelBandwidth": 434.062, + "ImageOrientationPatientDICOM": [ + 0.99969, + 0.00414, + 0.0244, + -0.00829, + 0.98499, + 0.1724 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20171215 (OpenJPEG build) Clang8.1.0", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-juntendo750w03/anat/sub-juntendo750w03_flip-2_mt-off_space-other_MTS.json b/derivatives/data_preprocessed/sub-juntendo750w03/anat/sub-juntendo750w03_flip-2_mt-off_space-other_MTS.json index 8ae13c1971..7fdb33b6bc 100644 --- a/derivatives/data_preprocessed/sub-juntendo750w03/anat/sub-juntendo750w03_flip-2_mt-off_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-juntendo750w03/anat/sub-juntendo750w03_flip-2_mt-off_space-other_MTS.json @@ -1,42 +1,50 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "GE", - "ManufacturersModelName": "DISCOVERY_MR750w", - "InstitutionName": "JUNTENDO_UNV_HP", - "DeviceSerialNumber": "0000000000EM0236", - "StationName": "GEMR750W", - "BodyPartExamined": "NECK", - "PatientPosition": "HFS", - "SoftwareVersions": "27_LX_MR_Software_release:DV26.0_R02_1810.b", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-T1w", - "ProtocolName": "GRE-T1w", - "ScanningSequence": "GR", - "SequenceVariant": "SS_SP", - "ScanOptions": "EDR_GEMS_FILTERED_GEMS_PFF", - "ImageType": ["ORIGINAL", "PRIMARY", "OTHER"], - "SeriesNumber": 12, - "AcquisitionTime": "19:34:31.000000", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SpacingBetweenSlices": 5, - "SAR": 0.0220847, - "EchoTime": 0.004, - "RepetitionTime": 0.015, - "FlipAngle": 15, - "PercentPhaseFOV": 100, - "AcquisitionMatrixPE": 192, - "ReconMatrixPE": 192, - "PixelBandwidth": 434.062, - "ImageOrientationPatientDICOM": [ - 0.99969, - 0.00414, - 0.0244, - -0.00829, - 0.98499, - 0.1724 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20171215 (OpenJPEG build) Clang8.1.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "GE", + "ManufacturersModelName": "DISCOVERY_MR750w", + "InstitutionName": "JUNTENDO_UNV_HP", + "DeviceSerialNumber": "0000000000EM0236", + "StationName": "GEMR750W", + "BodyPartExamined": "NECK", + "PatientPosition": "HFS", + "SoftwareVersions": "27_LX_MR_Software_release:DV26.0_R02_1810.b", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-T1w", + "ProtocolName": "GRE-T1w", + "ScanningSequence": "GR", + "SequenceVariant": "SS_SP", + "ScanOptions": "EDR_GEMS_FILTERED_GEMS_PFF", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "OTHER" + ], + "SeriesNumber": 12, + "AcquisitionTime": "19:34:31.000000", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SpacingBetweenSlices": 5, + "SAR": 0.0220847, + "EchoTime": 0.004, + "RepetitionTime": 0.015, + "FlipAngle": 15, + "PercentPhaseFOV": 100, + "AcquisitionMatrixPE": 192, + "ReconMatrixPE": 192, + "PixelBandwidth": 434.062, + "ImageOrientationPatientDICOM": [ + 0.99969, + 0.00414, + 0.0244, + -0.00829, + 0.98499, + 0.1724 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20171215 (OpenJPEG build) Clang8.1.0", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-juntendo750w03/anat/sub-juntendo750w03_space-other_T1w.json b/derivatives/data_preprocessed/sub-juntendo750w03/anat/sub-juntendo750w03_space-other_T1w.json index 8be745f3b4..3ab26300fb 100644 --- a/derivatives/data_preprocessed/sub-juntendo750w03/anat/sub-juntendo750w03_space-other_T1w.json +++ b/derivatives/data_preprocessed/sub-juntendo750w03/anat/sub-juntendo750w03_space-other_T1w.json @@ -1,43 +1,52 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "GE", - "ManufacturersModelName": "DISCOVERY_MR750w", - "InstitutionName": "JUNTENDO_UNV_HP", - "DeviceSerialNumber": "0000000000EM0236", - "StationName": "GEMR750W", - "BodyPartExamined": "CSPINE", - "PatientPosition": "HFS", - "SoftwareVersions": "27_LX_MR_Software_release:DV26.0_R02_1810.b", - "MRAcquisitionType": "3D", - "SeriesDescription": "T1w", - "ProtocolName": "T1w", - "ScanningSequence": "GR", - "SequenceVariant": "SS_SP_SK", - "ScanOptions": "FAST_GEMS_EDR_GEMS_FILTERED_GEMS_ACC_GEMS_PFF_IR_GEMS", - "ImageType": ["ORIGINAL", "PRIMARY", "OTHER"], - "SeriesNumber": 5, - "AcquisitionTime": "18:57:20.000000", - "AcquisitionNumber": 1, - "SliceThickness": 1, - "SpacingBetweenSlices": 1, - "SAR": 0.115282, - "EchoTime": 0.001288, - "RepetitionTime": 0.003832, - "InversionTime": 1, - "FlipAngle": 9, - "PercentPhaseFOV": 80, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 320, - "PixelBandwidth": 892.875, - "ImageOrientationPatientDICOM": [ - -0.01508, - 0.99989, - 0.00105, - -0.05352, - 0.00024, - -0.99857 ], - "InPlanePhaseEncodingDirectionDICOM": "ROW", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20171215 (OpenJPEG build) Clang8.1.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "GE", + "ManufacturersModelName": "DISCOVERY_MR750w", + "InstitutionName": "JUNTENDO_UNV_HP", + "DeviceSerialNumber": "0000000000EM0236", + "StationName": "GEMR750W", + "BodyPartExamined": "CSPINE", + "PatientPosition": "HFS", + "SoftwareVersions": "27_LX_MR_Software_release:DV26.0_R02_1810.b", + "MRAcquisitionType": "3D", + "SeriesDescription": "T1w", + "ProtocolName": "T1w", + "ScanningSequence": "GR", + "SequenceVariant": "SS_SP_SK", + "ScanOptions": "FAST_GEMS_EDR_GEMS_FILTERED_GEMS_ACC_GEMS_PFF_IR_GEMS", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "OTHER" + ], + "SeriesNumber": 5, + "AcquisitionTime": "18:57:20.000000", + "AcquisitionNumber": 1, + "SliceThickness": 1, + "SpacingBetweenSlices": 1, + "SAR": 0.115282, + "EchoTime": 0.001288, + "RepetitionTime": 0.003832, + "InversionTime": 1, + "FlipAngle": 9, + "PercentPhaseFOV": 80, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 320, + "PixelBandwidth": 892.875, + "ImageOrientationPatientDICOM": [ + -0.01508, + 0.99989, + 0.00105, + -0.05352, + 0.00024, + -0.99857 + ], + "InPlanePhaseEncodingDirectionDICOM": "ROW", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20171215 (OpenJPEG build) Clang8.1.0", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-juntendo750w03/anat/sub-juntendo750w03_space-other_T2star.json b/derivatives/data_preprocessed/sub-juntendo750w03/anat/sub-juntendo750w03_space-other_T2star.json index 23135d5a4d..6d29c72620 100644 --- a/derivatives/data_preprocessed/sub-juntendo750w03/anat/sub-juntendo750w03_space-other_T2star.json +++ b/derivatives/data_preprocessed/sub-juntendo750w03/anat/sub-juntendo750w03_space-other_T2star.json @@ -45,5 +45,9 @@ "InPlanePhaseEncodingDirectionDICOM": "COL", "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20171215 (OpenJPEG build) Clang8.1.0", - "AcquisitionDuration": 288.0 + "AcquisitionDuration": 288.0, + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-juntendo750w03/anat/sub-juntendo750w03_space-other_T2w.json b/derivatives/data_preprocessed/sub-juntendo750w03/anat/sub-juntendo750w03_space-other_T2w.json index 984d5cb0ad..0979ed476a 100644 --- a/derivatives/data_preprocessed/sub-juntendo750w03/anat/sub-juntendo750w03_space-other_T2w.json +++ b/derivatives/data_preprocessed/sub-juntendo750w03/anat/sub-juntendo750w03_space-other_T2w.json @@ -1,43 +1,52 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "GE", - "ManufacturersModelName": "DISCOVERY_MR750w", - "InstitutionName": "JUNTENDO_UNV_HP", - "DeviceSerialNumber": "0000000000EM0236", - "StationName": "GEMR750W", - "BodyPartExamined": "CSPINE", - "PatientPosition": "HFS", - "SoftwareVersions": "27_LX_MR_Software_release:DV26.0_R02_1810.b", - "MRAcquisitionType": "3D", - "SeriesDescription": "T2w", - "ProtocolName": "T2w", - "ScanningSequence": "SE", - "SequenceVariant": "SK_OSP", - "ScanOptions": "FC_FREQ_AX_GEMS_FC_NPW_EDR_GEMS_FILTERED_GEMS_ACC_GEMS", - "ImageType": ["ORIGINAL", "PRIMARY", "OTHER"], - "SeriesNumber": 7, - "AcquisitionTime": "19:04:39.000000", - "AcquisitionNumber": 1, - "SliceThickness": 0.8, - "SpacingBetweenSlices": 0.8, - "SAR": 0.3342, - "EchoTime": 0.136111, - "RepetitionTime": 2.502, - "FlipAngle": 90, - "PercentPhaseFOV": 100, - "EchoTrainLength": 78, - "AcquisitionMatrixPE": 320, - "ReconMatrixPE": 320, - "PixelBandwidth": 520.812, - "ImageOrientationPatientDICOM": [ - -0.0128, - 0.99992, - 0.00082, - -0.03621, - 0.00035, - -0.99934 ], - "InPlanePhaseEncodingDirectionDICOM": "ROW", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20171215 (OpenJPEG build) Clang8.1.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "GE", + "ManufacturersModelName": "DISCOVERY_MR750w", + "InstitutionName": "JUNTENDO_UNV_HP", + "DeviceSerialNumber": "0000000000EM0236", + "StationName": "GEMR750W", + "BodyPartExamined": "CSPINE", + "PatientPosition": "HFS", + "SoftwareVersions": "27_LX_MR_Software_release:DV26.0_R02_1810.b", + "MRAcquisitionType": "3D", + "SeriesDescription": "T2w", + "ProtocolName": "T2w", + "ScanningSequence": "SE", + "SequenceVariant": "SK_OSP", + "ScanOptions": "FC_FREQ_AX_GEMS_FC_NPW_EDR_GEMS_FILTERED_GEMS_ACC_GEMS", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "OTHER" + ], + "SeriesNumber": 7, + "AcquisitionTime": "19:04:39.000000", + "AcquisitionNumber": 1, + "SliceThickness": 0.8, + "SpacingBetweenSlices": 0.8, + "SAR": 0.3342, + "EchoTime": 0.136111, + "RepetitionTime": 2.502, + "FlipAngle": 90, + "PercentPhaseFOV": 100, + "EchoTrainLength": 78, + "AcquisitionMatrixPE": 320, + "ReconMatrixPE": 320, + "PixelBandwidth": 520.812, + "ImageOrientationPatientDICOM": [ + -0.0128, + 0.99992, + 0.00082, + -0.03621, + 0.00035, + -0.99934 + ], + "InPlanePhaseEncodingDirectionDICOM": "ROW", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20171215 (OpenJPEG build) Clang8.1.0", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-juntendo750w04/anat/sub-juntendo750w04_flip-1_mt-on_space-other_MTS.json b/derivatives/data_preprocessed/sub-juntendo750w04/anat/sub-juntendo750w04_flip-1_mt-on_space-other_MTS.json index ec47709741..162293428a 100644 --- a/derivatives/data_preprocessed/sub-juntendo750w04/anat/sub-juntendo750w04_flip-1_mt-on_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-juntendo750w04/anat/sub-juntendo750w04_flip-1_mt-on_space-other_MTS.json @@ -1,42 +1,50 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "GE", - "ManufacturersModelName": "DISCOVERY_MR750w", - "InstitutionName": "JUNTENDO_UNV_HP", - "DeviceSerialNumber": "0000000000EM0236", - "StationName": "GEMR750W", - "BodyPartExamined": "NECK", - "PatientPosition": "HFS", - "SoftwareVersions": "27_LX_MR_Software_release:DV26.0_R02_1810.b", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-MT1", - "ProtocolName": "GRE-MT1", - "ScanningSequence": "GR", - "SequenceVariant": "SS_SP", - "ScanOptions": "EDR_GEMS_MT_GEMS_FILTERED_GEMS_PFF", - "ImageType": ["ORIGINAL", "PRIMARY", "OTHER"], - "SeriesNumber": 8, - "AcquisitionTime": "20:33:38.000000", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SpacingBetweenSlices": 5, - "SAR": 1.27294, - "EchoTime": 0.004, - "RepetitionTime": 0.047, - "FlipAngle": 9, - "PercentPhaseFOV": 100, - "AcquisitionMatrixPE": 192, - "ReconMatrixPE": 192, - "PixelBandwidth": 434.062, - "ImageOrientationPatientDICOM": [ - 0.99994, - 0.01062, - -0.00067, - -0.01017, - 0.97239, - 0.23312 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20171215 (OpenJPEG build) Clang8.1.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "GE", + "ManufacturersModelName": "DISCOVERY_MR750w", + "InstitutionName": "JUNTENDO_UNV_HP", + "DeviceSerialNumber": "0000000000EM0236", + "StationName": "GEMR750W", + "BodyPartExamined": "NECK", + "PatientPosition": "HFS", + "SoftwareVersions": "27_LX_MR_Software_release:DV26.0_R02_1810.b", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-MT1", + "ProtocolName": "GRE-MT1", + "ScanningSequence": "GR", + "SequenceVariant": "SS_SP", + "ScanOptions": "EDR_GEMS_MT_GEMS_FILTERED_GEMS_PFF", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "OTHER" + ], + "SeriesNumber": 8, + "AcquisitionTime": "20:33:38.000000", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SpacingBetweenSlices": 5, + "SAR": 1.27294, + "EchoTime": 0.004, + "RepetitionTime": 0.047, + "FlipAngle": 9, + "PercentPhaseFOV": 100, + "AcquisitionMatrixPE": 192, + "ReconMatrixPE": 192, + "PixelBandwidth": 434.062, + "ImageOrientationPatientDICOM": [ + 0.99994, + 0.01062, + -0.00067, + -0.01017, + 0.97239, + 0.23312 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20171215 (OpenJPEG build) Clang8.1.0", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-juntendo750w04/anat/sub-juntendo750w04_flip-2_mt-off_space-other_MTS.json b/derivatives/data_preprocessed/sub-juntendo750w04/anat/sub-juntendo750w04_flip-2_mt-off_space-other_MTS.json index 6e9341f077..add09a43e7 100644 --- a/derivatives/data_preprocessed/sub-juntendo750w04/anat/sub-juntendo750w04_flip-2_mt-off_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-juntendo750w04/anat/sub-juntendo750w04_flip-2_mt-off_space-other_MTS.json @@ -1,42 +1,50 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "GE", - "ManufacturersModelName": "DISCOVERY_MR750w", - "InstitutionName": "JUNTENDO_UNV_HP", - "DeviceSerialNumber": "0000000000EM0236", - "StationName": "GEMR750W", - "BodyPartExamined": "NECK", - "PatientPosition": "HFS", - "SoftwareVersions": "27_LX_MR_Software_release:DV26.0_R02_1810.b", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-T1w", - "ProtocolName": "GRE-T1w", - "ScanningSequence": "GR", - "SequenceVariant": "SS_SP", - "ScanOptions": "EDR_GEMS_FILTERED_GEMS_PFF", - "ImageType": ["ORIGINAL", "PRIMARY", "OTHER"], - "SeriesNumber": 10, - "AcquisitionTime": "20:44:52.000000", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SpacingBetweenSlices": 5, - "SAR": 0.027274, - "EchoTime": 0.004, - "RepetitionTime": 0.015, - "FlipAngle": 15, - "PercentPhaseFOV": 100, - "AcquisitionMatrixPE": 192, - "ReconMatrixPE": 192, - "PixelBandwidth": 434.062, - "ImageOrientationPatientDICOM": [ - 0.99994, - 0.01062, - -0.00067, - -0.01017, - 0.97239, - 0.23312 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20171215 (OpenJPEG build) Clang8.1.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "GE", + "ManufacturersModelName": "DISCOVERY_MR750w", + "InstitutionName": "JUNTENDO_UNV_HP", + "DeviceSerialNumber": "0000000000EM0236", + "StationName": "GEMR750W", + "BodyPartExamined": "NECK", + "PatientPosition": "HFS", + "SoftwareVersions": "27_LX_MR_Software_release:DV26.0_R02_1810.b", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-T1w", + "ProtocolName": "GRE-T1w", + "ScanningSequence": "GR", + "SequenceVariant": "SS_SP", + "ScanOptions": "EDR_GEMS_FILTERED_GEMS_PFF", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "OTHER" + ], + "SeriesNumber": 10, + "AcquisitionTime": "20:44:52.000000", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SpacingBetweenSlices": 5, + "SAR": 0.027274, + "EchoTime": 0.004, + "RepetitionTime": 0.015, + "FlipAngle": 15, + "PercentPhaseFOV": 100, + "AcquisitionMatrixPE": 192, + "ReconMatrixPE": 192, + "PixelBandwidth": 434.062, + "ImageOrientationPatientDICOM": [ + 0.99994, + 0.01062, + -0.00067, + -0.01017, + 0.97239, + 0.23312 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20171215 (OpenJPEG build) Clang8.1.0", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-juntendo750w04/anat/sub-juntendo750w04_space-other_T1w.json b/derivatives/data_preprocessed/sub-juntendo750w04/anat/sub-juntendo750w04_space-other_T1w.json index f2c714c0f5..86714d11d4 100644 --- a/derivatives/data_preprocessed/sub-juntendo750w04/anat/sub-juntendo750w04_space-other_T1w.json +++ b/derivatives/data_preprocessed/sub-juntendo750w04/anat/sub-juntendo750w04_space-other_T1w.json @@ -1,43 +1,52 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "GE", - "ManufacturersModelName": "DISCOVERY_MR750w", - "InstitutionName": "JUNTENDO_UNV_HP", - "DeviceSerialNumber": "0000000000EM0236", - "StationName": "GEMR750W", - "BodyPartExamined": "CSPINE", - "PatientPosition": "HFS", - "SoftwareVersions": "27_LX_MR_Software_release:DV26.0_R02_1810.b", - "MRAcquisitionType": "3D", - "SeriesDescription": "T1w", - "ProtocolName": "T1w", - "ScanningSequence": "GR", - "SequenceVariant": "SS_SP_SK", - "ScanOptions": "FAST_GEMS_EDR_GEMS_FILTERED_GEMS_ACC_GEMS_PFF_IR_GEMS", - "ImageType": ["ORIGINAL", "PRIMARY", "OTHER"], - "SeriesNumber": 4, - "AcquisitionTime": "20:15:29.000000", - "AcquisitionNumber": 1, - "SliceThickness": 1, - "SpacingBetweenSlices": 1, - "SAR": 0.138347, - "EchoTime": 0.001276, - "RepetitionTime": 0.003828, - "InversionTime": 1, - "FlipAngle": 9, - "PercentPhaseFOV": 80, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 320, - "PixelBandwidth": 892.875, - "ImageOrientationPatientDICOM": [ - 0.04544, - 0.99896, - 0.00337, - -0.03608, - 0.00501, - -0.99934 ], - "InPlanePhaseEncodingDirectionDICOM": "ROW", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20171215 (OpenJPEG build) Clang8.1.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "GE", + "ManufacturersModelName": "DISCOVERY_MR750w", + "InstitutionName": "JUNTENDO_UNV_HP", + "DeviceSerialNumber": "0000000000EM0236", + "StationName": "GEMR750W", + "BodyPartExamined": "CSPINE", + "PatientPosition": "HFS", + "SoftwareVersions": "27_LX_MR_Software_release:DV26.0_R02_1810.b", + "MRAcquisitionType": "3D", + "SeriesDescription": "T1w", + "ProtocolName": "T1w", + "ScanningSequence": "GR", + "SequenceVariant": "SS_SP_SK", + "ScanOptions": "FAST_GEMS_EDR_GEMS_FILTERED_GEMS_ACC_GEMS_PFF_IR_GEMS", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "OTHER" + ], + "SeriesNumber": 4, + "AcquisitionTime": "20:15:29.000000", + "AcquisitionNumber": 1, + "SliceThickness": 1, + "SpacingBetweenSlices": 1, + "SAR": 0.138347, + "EchoTime": 0.001276, + "RepetitionTime": 0.003828, + "InversionTime": 1, + "FlipAngle": 9, + "PercentPhaseFOV": 80, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 320, + "PixelBandwidth": 892.875, + "ImageOrientationPatientDICOM": [ + 0.04544, + 0.99896, + 0.00337, + -0.03608, + 0.00501, + -0.99934 + ], + "InPlanePhaseEncodingDirectionDICOM": "ROW", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20171215 (OpenJPEG build) Clang8.1.0", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-juntendo750w04/anat/sub-juntendo750w04_space-other_T2star.json b/derivatives/data_preprocessed/sub-juntendo750w04/anat/sub-juntendo750w04_space-other_T2star.json index c502901baa..3b7598874b 100644 --- a/derivatives/data_preprocessed/sub-juntendo750w04/anat/sub-juntendo750w04_space-other_T2star.json +++ b/derivatives/data_preprocessed/sub-juntendo750w04/anat/sub-juntendo750w04_space-other_T2star.json @@ -45,5 +45,9 @@ "InPlanePhaseEncodingDirectionDICOM": "COL", "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20171215 (OpenJPEG build) Clang8.1.0", - "AcquisitionDuration": 288.0 + "AcquisitionDuration": 288.0, + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-juntendo750w04/anat/sub-juntendo750w04_space-other_T2w.json b/derivatives/data_preprocessed/sub-juntendo750w04/anat/sub-juntendo750w04_space-other_T2w.json index e01a738d37..16752f6280 100644 --- a/derivatives/data_preprocessed/sub-juntendo750w04/anat/sub-juntendo750w04_space-other_T2w.json +++ b/derivatives/data_preprocessed/sub-juntendo750w04/anat/sub-juntendo750w04_space-other_T2w.json @@ -1,43 +1,52 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "GE", - "ManufacturersModelName": "DISCOVERY_MR750w", - "InstitutionName": "JUNTENDO_UNV_HP", - "DeviceSerialNumber": "0000000000EM0236", - "StationName": "GEMR750W", - "BodyPartExamined": "CSPINE", - "PatientPosition": "HFS", - "SoftwareVersions": "27_LX_MR_Software_release:DV26.0_R02_1810.b", - "MRAcquisitionType": "3D", - "SeriesDescription": "T2w", - "ProtocolName": "T2w", - "ScanningSequence": "SE", - "SequenceVariant": "SK_OSP", - "ScanOptions": "FC_FREQ_AX_GEMS_FC_NPW_EDR_GEMS_FILTERED_GEMS_ACC_GEMS", - "ImageType": ["ORIGINAL", "PRIMARY", "OTHER"], - "SeriesNumber": 6, - "AcquisitionTime": "20:22:24.000000", - "AcquisitionNumber": 1, - "SliceThickness": 0.8, - "SpacingBetweenSlices": 0.8, - "SAR": 0.3165, - "EchoTime": 0.134971, - "RepetitionTime": 2.502, - "FlipAngle": 90, - "PercentPhaseFOV": 100, - "EchoTrainLength": 78, - "AcquisitionMatrixPE": 320, - "ReconMatrixPE": 320, - "PixelBandwidth": 520.812, - "ImageOrientationPatientDICOM": [ - 0.03531, - 0.99937, - 0.00299, - -0.0482, - 0.00469, - -0.99883 ], - "InPlanePhaseEncodingDirectionDICOM": "ROW", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20171215 (OpenJPEG build) Clang8.1.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "GE", + "ManufacturersModelName": "DISCOVERY_MR750w", + "InstitutionName": "JUNTENDO_UNV_HP", + "DeviceSerialNumber": "0000000000EM0236", + "StationName": "GEMR750W", + "BodyPartExamined": "CSPINE", + "PatientPosition": "HFS", + "SoftwareVersions": "27_LX_MR_Software_release:DV26.0_R02_1810.b", + "MRAcquisitionType": "3D", + "SeriesDescription": "T2w", + "ProtocolName": "T2w", + "ScanningSequence": "SE", + "SequenceVariant": "SK_OSP", + "ScanOptions": "FC_FREQ_AX_GEMS_FC_NPW_EDR_GEMS_FILTERED_GEMS_ACC_GEMS", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "OTHER" + ], + "SeriesNumber": 6, + "AcquisitionTime": "20:22:24.000000", + "AcquisitionNumber": 1, + "SliceThickness": 0.8, + "SpacingBetweenSlices": 0.8, + "SAR": 0.3165, + "EchoTime": 0.134971, + "RepetitionTime": 2.502, + "FlipAngle": 90, + "PercentPhaseFOV": 100, + "EchoTrainLength": 78, + "AcquisitionMatrixPE": 320, + "ReconMatrixPE": 320, + "PixelBandwidth": 520.812, + "ImageOrientationPatientDICOM": [ + 0.03531, + 0.99937, + 0.00299, + -0.0482, + 0.00469, + -0.99883 + ], + "InPlanePhaseEncodingDirectionDICOM": "ROW", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20171215 (OpenJPEG build) Clang8.1.0", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-juntendo750w05/anat/sub-juntendo750w05_flip-1_mt-on_space-other_MTS.json b/derivatives/data_preprocessed/sub-juntendo750w05/anat/sub-juntendo750w05_flip-1_mt-on_space-other_MTS.json index 65fcc6307d..11434a63af 100644 --- a/derivatives/data_preprocessed/sub-juntendo750w05/anat/sub-juntendo750w05_flip-1_mt-on_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-juntendo750w05/anat/sub-juntendo750w05_flip-1_mt-on_space-other_MTS.json @@ -1,42 +1,50 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "GE", - "ManufacturersModelName": "DISCOVERY_MR750w", - "InstitutionName": "JUNTENDO_UNV_HP", - "DeviceSerialNumber": "0000000000EM0236", - "StationName": "GEMR750W", - "BodyPartExamined": "NECK", - "PatientPosition": "HFS", - "SoftwareVersions": "27_LX_MR_Software_release:DV26.0_R02_1810.b", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-MT1", - "ProtocolName": "GRE-MT1", - "ScanningSequence": "GR", - "SequenceVariant": "SS_SP", - "ScanOptions": "EDR_GEMS_MT_GEMS_FILTERED_GEMS_PFF", - "ImageType": ["ORIGINAL", "PRIMARY", "OTHER"], - "SeriesNumber": 10, - "AcquisitionTime": "20:47:38.000000", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SpacingBetweenSlices": 5, - "SAR": 1.0859, - "EchoTime": 0.004, - "RepetitionTime": 0.042, - "FlipAngle": 9, - "PercentPhaseFOV": 100, - "AcquisitionMatrixPE": 192, - "ReconMatrixPE": 256, - "PixelBandwidth": 325.547, - "ImageOrientationPatientDICOM": [ - 0.9997, - -0, - 0.02461, - -0.00826, - 0.94196, - 0.33562 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 Clang10.0.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "GE", + "ManufacturersModelName": "DISCOVERY_MR750w", + "InstitutionName": "JUNTENDO_UNV_HP", + "DeviceSerialNumber": "0000000000EM0236", + "StationName": "GEMR750W", + "BodyPartExamined": "NECK", + "PatientPosition": "HFS", + "SoftwareVersions": "27_LX_MR_Software_release:DV26.0_R02_1810.b", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-MT1", + "ProtocolName": "GRE-MT1", + "ScanningSequence": "GR", + "SequenceVariant": "SS_SP", + "ScanOptions": "EDR_GEMS_MT_GEMS_FILTERED_GEMS_PFF", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "OTHER" + ], + "SeriesNumber": 10, + "AcquisitionTime": "20:47:38.000000", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SpacingBetweenSlices": 5, + "SAR": 1.0859, + "EchoTime": 0.004, + "RepetitionTime": 0.042, + "FlipAngle": 9, + "PercentPhaseFOV": 100, + "AcquisitionMatrixPE": 192, + "ReconMatrixPE": 256, + "PixelBandwidth": 325.547, + "ImageOrientationPatientDICOM": [ + 0.9997, + 0, + 0.02461, + -0.00826, + 0.94196, + 0.33562 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 Clang10.0.0", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-juntendo750w05/anat/sub-juntendo750w05_flip-2_mt-off_space-other_MTS.json b/derivatives/data_preprocessed/sub-juntendo750w05/anat/sub-juntendo750w05_flip-2_mt-off_space-other_MTS.json index 67ae4c20d8..7709fc8a1b 100644 --- a/derivatives/data_preprocessed/sub-juntendo750w05/anat/sub-juntendo750w05_flip-2_mt-off_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-juntendo750w05/anat/sub-juntendo750w05_flip-2_mt-off_space-other_MTS.json @@ -1,42 +1,50 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "GE", - "ManufacturersModelName": "DISCOVERY_MR750w", - "InstitutionName": "JUNTENDO_UNV_HP", - "DeviceSerialNumber": "0000000000EM0236", - "StationName": "GEMR750W", - "BodyPartExamined": "NECK", - "PatientPosition": "HFS", - "SoftwareVersions": "27_LX_MR_Software_release:DV26.0_R02_1810.b", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-T1w", - "ProtocolName": "GRE-T1w", - "ScanningSequence": "GR", - "SequenceVariant": "SS_SP", - "ScanOptions": "EDR_GEMS_FILTERED_GEMS_PFF", - "ImageType": ["ORIGINAL", "PRIMARY", "OTHER"], - "SeriesNumber": 12, - "AcquisitionTime": "20:58:0.000000", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SpacingBetweenSlices": 5, - "SAR": 0.0206904, - "EchoTime": 0.004, - "RepetitionTime": 0.015, - "FlipAngle": 15, - "PercentPhaseFOV": 100, - "AcquisitionMatrixPE": 192, - "ReconMatrixPE": 230, - "PixelBandwidth": 362.348, - "ImageOrientationPatientDICOM": [ - 0.9997, - -0, - 0.02461, - -0.00826, - 0.94196, - 0.33562 ], - "InPlanePhaseEncodingDirectionDICOM": "ROW", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 Clang10.0.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "GE", + "ManufacturersModelName": "DISCOVERY_MR750w", + "InstitutionName": "JUNTENDO_UNV_HP", + "DeviceSerialNumber": "0000000000EM0236", + "StationName": "GEMR750W", + "BodyPartExamined": "NECK", + "PatientPosition": "HFS", + "SoftwareVersions": "27_LX_MR_Software_release:DV26.0_R02_1810.b", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-T1w", + "ProtocolName": "GRE-T1w", + "ScanningSequence": "GR", + "SequenceVariant": "SS_SP", + "ScanOptions": "EDR_GEMS_FILTERED_GEMS_PFF", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "OTHER" + ], + "SeriesNumber": 12, + "AcquisitionTime": "20:58:0.000000", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SpacingBetweenSlices": 5, + "SAR": 0.0206904, + "EchoTime": 0.004, + "RepetitionTime": 0.015, + "FlipAngle": 15, + "PercentPhaseFOV": 100, + "AcquisitionMatrixPE": 192, + "ReconMatrixPE": 230, + "PixelBandwidth": 362.348, + "ImageOrientationPatientDICOM": [ + 0.9997, + 0, + 0.02461, + -0.00826, + 0.94196, + 0.33562 + ], + "InPlanePhaseEncodingDirectionDICOM": "ROW", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 Clang10.0.0", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-juntendo750w05/anat/sub-juntendo750w05_space-other_T1w.json b/derivatives/data_preprocessed/sub-juntendo750w05/anat/sub-juntendo750w05_space-other_T1w.json index 2f011bc53e..4ea0ab8bee 100644 --- a/derivatives/data_preprocessed/sub-juntendo750w05/anat/sub-juntendo750w05_space-other_T1w.json +++ b/derivatives/data_preprocessed/sub-juntendo750w05/anat/sub-juntendo750w05_space-other_T1w.json @@ -1,43 +1,52 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "GE", - "ManufacturersModelName": "DISCOVERY_MR750w", - "InstitutionName": "JUNTENDO_UNV_HP", - "DeviceSerialNumber": "0000000000EM0236", - "StationName": "GEMR750W", - "BodyPartExamined": "CSPINE", - "PatientPosition": "HFS", - "SoftwareVersions": "27_LX_MR_Software_release:DV26.0_R02_1810.b", - "MRAcquisitionType": "3D", - "SeriesDescription": "T1w", - "ProtocolName": "T1w", - "ScanningSequence": "GR", - "SequenceVariant": "SS_SP_SK", - "ScanOptions": "FAST_GEMS_EDR_GEMS_FILTERED_GEMS_ACC_GEMS_PFF_IR_GEMS", - "ImageType": ["ORIGINAL", "PRIMARY", "OTHER"], - "SeriesNumber": 4, - "AcquisitionTime": "20:20:1.000000", - "AcquisitionNumber": 1, - "SliceThickness": 1, - "SpacingBetweenSlices": 1, - "SAR": 0.116265, - "EchoTime": 0.001292, - "RepetitionTime": 0.0038, - "InversionTime": 1, - "FlipAngle": 9, - "PercentPhaseFOV": 80, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 320, - "PixelBandwidth": 892.875, - "ImageOrientationPatientDICOM": [ - -0, - 1, - 0, - 0.02653, - -0, - -0.99965 ], - "InPlanePhaseEncodingDirectionDICOM": "ROW", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 Clang10.0.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "GE", + "ManufacturersModelName": "DISCOVERY_MR750w", + "InstitutionName": "JUNTENDO_UNV_HP", + "DeviceSerialNumber": "0000000000EM0236", + "StationName": "GEMR750W", + "BodyPartExamined": "CSPINE", + "PatientPosition": "HFS", + "SoftwareVersions": "27_LX_MR_Software_release:DV26.0_R02_1810.b", + "MRAcquisitionType": "3D", + "SeriesDescription": "T1w", + "ProtocolName": "T1w", + "ScanningSequence": "GR", + "SequenceVariant": "SS_SP_SK", + "ScanOptions": "FAST_GEMS_EDR_GEMS_FILTERED_GEMS_ACC_GEMS_PFF_IR_GEMS", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "OTHER" + ], + "SeriesNumber": 4, + "AcquisitionTime": "20:20:1.000000", + "AcquisitionNumber": 1, + "SliceThickness": 1, + "SpacingBetweenSlices": 1, + "SAR": 0.116265, + "EchoTime": 0.001292, + "RepetitionTime": 0.0038, + "InversionTime": 1, + "FlipAngle": 9, + "PercentPhaseFOV": 80, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 320, + "PixelBandwidth": 892.875, + "ImageOrientationPatientDICOM": [ + 0, + 1, + 0, + 0.02653, + 0, + -0.99965 + ], + "InPlanePhaseEncodingDirectionDICOM": "ROW", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 Clang10.0.0", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-juntendo750w05/anat/sub-juntendo750w05_space-other_T2star.json b/derivatives/data_preprocessed/sub-juntendo750w05/anat/sub-juntendo750w05_space-other_T2star.json index 520441472a..019471bef0 100644 --- a/derivatives/data_preprocessed/sub-juntendo750w05/anat/sub-juntendo750w05_space-other_T2star.json +++ b/derivatives/data_preprocessed/sub-juntendo750w05/anat/sub-juntendo750w05_space-other_T2star.json @@ -46,5 +46,9 @@ "InPlanePhaseEncodingDirectionDICOM": "COL", "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20180622 Clang10.0.0", - "AcquisitionDuration": 288.0 + "AcquisitionDuration": 288.0, + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-juntendo750w05/anat/sub-juntendo750w05_space-other_T2w.json b/derivatives/data_preprocessed/sub-juntendo750w05/anat/sub-juntendo750w05_space-other_T2w.json index 8ce1bed81f..cf8a664ac8 100644 --- a/derivatives/data_preprocessed/sub-juntendo750w05/anat/sub-juntendo750w05_space-other_T2w.json +++ b/derivatives/data_preprocessed/sub-juntendo750w05/anat/sub-juntendo750w05_space-other_T2w.json @@ -1,43 +1,52 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "GE", - "ManufacturersModelName": "DISCOVERY_MR750w", - "InstitutionName": "JUNTENDO_UNV_HP", - "DeviceSerialNumber": "0000000000EM0236", - "StationName": "GEMR750W", - "BodyPartExamined": "CSPINE", - "PatientPosition": "HFS", - "SoftwareVersions": "27_LX_MR_Software_release:DV26.0_R02_1810.b", - "MRAcquisitionType": "3D", - "SeriesDescription": "T2w", - "ProtocolName": "T2w", - "ScanningSequence": "SE", - "SequenceVariant": "SK_OSP", - "ScanOptions": "FC_FREQ_AX_GEMS_FC_NPW_EDR_GEMS_FILTERED_GEMS_ACC_GEMS", - "ImageType": ["ORIGINAL", "PRIMARY", "OTHER"], - "SeriesNumber": 6, - "AcquisitionTime": "20:26:12.000000", - "AcquisitionNumber": 1, - "SliceThickness": 0.8, - "SpacingBetweenSlices": 0.8, - "SAR": 0.3135, - "EchoTime": 0.135355, - "RepetitionTime": 2.502, - "FlipAngle": 90, - "PercentPhaseFOV": 100, - "EchoTrainLength": 78, - "AcquisitionMatrixPE": 320, - "ReconMatrixPE": 320, - "PixelBandwidth": 520.812, - "ImageOrientationPatientDICOM": [ - -0, - 1, - 0, - 0.03173, - -0, - -0.9995 ], - "InPlanePhaseEncodingDirectionDICOM": "ROW", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 Clang10.0.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "GE", + "ManufacturersModelName": "DISCOVERY_MR750w", + "InstitutionName": "JUNTENDO_UNV_HP", + "DeviceSerialNumber": "0000000000EM0236", + "StationName": "GEMR750W", + "BodyPartExamined": "CSPINE", + "PatientPosition": "HFS", + "SoftwareVersions": "27_LX_MR_Software_release:DV26.0_R02_1810.b", + "MRAcquisitionType": "3D", + "SeriesDescription": "T2w", + "ProtocolName": "T2w", + "ScanningSequence": "SE", + "SequenceVariant": "SK_OSP", + "ScanOptions": "FC_FREQ_AX_GEMS_FC_NPW_EDR_GEMS_FILTERED_GEMS_ACC_GEMS", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "OTHER" + ], + "SeriesNumber": 6, + "AcquisitionTime": "20:26:12.000000", + "AcquisitionNumber": 1, + "SliceThickness": 0.8, + "SpacingBetweenSlices": 0.8, + "SAR": 0.3135, + "EchoTime": 0.135355, + "RepetitionTime": 2.502, + "FlipAngle": 90, + "PercentPhaseFOV": 100, + "EchoTrainLength": 78, + "AcquisitionMatrixPE": 320, + "ReconMatrixPE": 320, + "PixelBandwidth": 520.812, + "ImageOrientationPatientDICOM": [ + 0, + 1, + 0, + 0.03173, + 0, + -0.9995 + ], + "InPlanePhaseEncodingDirectionDICOM": "ROW", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 Clang10.0.0", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-juntendo750w06/anat/sub-juntendo750w06_flip-1_mt-on_space-other_MTS.json b/derivatives/data_preprocessed/sub-juntendo750w06/anat/sub-juntendo750w06_flip-1_mt-on_space-other_MTS.json index 28430bb4f3..a086766e9c 100644 --- a/derivatives/data_preprocessed/sub-juntendo750w06/anat/sub-juntendo750w06_flip-1_mt-on_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-juntendo750w06/anat/sub-juntendo750w06_flip-1_mt-on_space-other_MTS.json @@ -1,42 +1,50 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "GE", - "ManufacturersModelName": "DISCOVERY_MR750w", - "InstitutionName": "JUNTENDO_UNV_HP", - "DeviceSerialNumber": "0000000000EM0236", - "StationName": "GEMR750W", - "BodyPartExamined": "NECK", - "PatientPosition": "HFS", - "SoftwareVersions": "27_LX_MR_Software_release:DV26.0_R02_1810.b", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-MT1", - "ProtocolName": "GRE-MT1", - "ScanningSequence": "GR", - "SequenceVariant": "SS_SP", - "ScanOptions": "EDR_GEMS_MT_GEMS_FILTERED_GEMS_PFF", - "ImageType": ["ORIGINAL", "PRIMARY", "OTHER"], - "SeriesNumber": 8, - "AcquisitionTime": "18:34:59.000000", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SpacingBetweenSlices": 5, - "SAR": 1.09738, - "EchoTime": 0.004, - "RepetitionTime": 0.047, - "FlipAngle": 9, - "PercentPhaseFOV": 100, - "AcquisitionMatrixPE": 192, - "ReconMatrixPE": 256, - "PixelBandwidth": 325.547, - "ImageOrientationPatientDICOM": [ - 0.99869, - -0.00219, - 0.05105, - -0.0106, - 0.96848, - 0.24887 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20171215 (OpenJPEG build) Clang8.1.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "GE", + "ManufacturersModelName": "DISCOVERY_MR750w", + "InstitutionName": "JUNTENDO_UNV_HP", + "DeviceSerialNumber": "0000000000EM0236", + "StationName": "GEMR750W", + "BodyPartExamined": "NECK", + "PatientPosition": "HFS", + "SoftwareVersions": "27_LX_MR_Software_release:DV26.0_R02_1810.b", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-MT1", + "ProtocolName": "GRE-MT1", + "ScanningSequence": "GR", + "SequenceVariant": "SS_SP", + "ScanOptions": "EDR_GEMS_MT_GEMS_FILTERED_GEMS_PFF", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "OTHER" + ], + "SeriesNumber": 8, + "AcquisitionTime": "18:34:59.000000", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SpacingBetweenSlices": 5, + "SAR": 1.09738, + "EchoTime": 0.004, + "RepetitionTime": 0.047, + "FlipAngle": 9, + "PercentPhaseFOV": 100, + "AcquisitionMatrixPE": 192, + "ReconMatrixPE": 256, + "PixelBandwidth": 325.547, + "ImageOrientationPatientDICOM": [ + 0.99869, + -0.00219, + 0.05105, + -0.0106, + 0.96848, + 0.24887 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20171215 (OpenJPEG build) Clang8.1.0", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-juntendo750w06/anat/sub-juntendo750w06_flip-2_mt-off_space-other_MTS.json b/derivatives/data_preprocessed/sub-juntendo750w06/anat/sub-juntendo750w06_flip-2_mt-off_space-other_MTS.json index e3b0a30b93..423028807c 100644 --- a/derivatives/data_preprocessed/sub-juntendo750w06/anat/sub-juntendo750w06_flip-2_mt-off_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-juntendo750w06/anat/sub-juntendo750w06_flip-2_mt-off_space-other_MTS.json @@ -1,42 +1,50 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "GE", - "ManufacturersModelName": "DISCOVERY_MR750w", - "InstitutionName": "JUNTENDO_UNV_HP", - "DeviceSerialNumber": "0000000000EM0236", - "StationName": "GEMR750W", - "BodyPartExamined": "NECK", - "PatientPosition": "HFS", - "SoftwareVersions": "27_LX_MR_Software_release:DV26.0_R02_1810.b", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-T1w", - "ProtocolName": "GRE-T1w", - "ScanningSequence": "GR", - "SequenceVariant": "SS_SP", - "ScanOptions": "EDR_GEMS_FILTERED_GEMS_PFF", - "ImageType": ["ORIGINAL", "PRIMARY", "OTHER"], - "SeriesNumber": 10, - "AcquisitionTime": "18:46:46.000000", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SpacingBetweenSlices": 5, - "SAR": 0.0235463, - "EchoTime": 0.004, - "RepetitionTime": 0.015, - "FlipAngle": 15, - "PercentPhaseFOV": 100, - "AcquisitionMatrixPE": 192, - "ReconMatrixPE": 230, - "PixelBandwidth": 362.348, - "ImageOrientationPatientDICOM": [ - 0.99869, - -0.00219, - 0.05105, - -0.0106, - 0.96848, - 0.24887 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20171215 (OpenJPEG build) Clang8.1.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "GE", + "ManufacturersModelName": "DISCOVERY_MR750w", + "InstitutionName": "JUNTENDO_UNV_HP", + "DeviceSerialNumber": "0000000000EM0236", + "StationName": "GEMR750W", + "BodyPartExamined": "NECK", + "PatientPosition": "HFS", + "SoftwareVersions": "27_LX_MR_Software_release:DV26.0_R02_1810.b", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-T1w", + "ProtocolName": "GRE-T1w", + "ScanningSequence": "GR", + "SequenceVariant": "SS_SP", + "ScanOptions": "EDR_GEMS_FILTERED_GEMS_PFF", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "OTHER" + ], + "SeriesNumber": 10, + "AcquisitionTime": "18:46:46.000000", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SpacingBetweenSlices": 5, + "SAR": 0.0235463, + "EchoTime": 0.004, + "RepetitionTime": 0.015, + "FlipAngle": 15, + "PercentPhaseFOV": 100, + "AcquisitionMatrixPE": 192, + "ReconMatrixPE": 230, + "PixelBandwidth": 362.348, + "ImageOrientationPatientDICOM": [ + 0.99869, + -0.00219, + 0.05105, + -0.0106, + 0.96848, + 0.24887 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20171215 (OpenJPEG build) Clang8.1.0", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-juntendo750w06/anat/sub-juntendo750w06_space-other_T1w.json b/derivatives/data_preprocessed/sub-juntendo750w06/anat/sub-juntendo750w06_space-other_T1w.json index f4dca3b171..6a7a5b2778 100644 --- a/derivatives/data_preprocessed/sub-juntendo750w06/anat/sub-juntendo750w06_space-other_T1w.json +++ b/derivatives/data_preprocessed/sub-juntendo750w06/anat/sub-juntendo750w06_space-other_T1w.json @@ -1,43 +1,52 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "GE", - "ManufacturersModelName": "DISCOVERY_MR750w", - "InstitutionName": "JUNTENDO_UNV_HP", - "DeviceSerialNumber": "0000000000EM0236", - "StationName": "GEMR750W", - "BodyPartExamined": "CSPINE", - "PatientPosition": "HFS", - "SoftwareVersions": "27_LX_MR_Software_release:DV26.0_R02_1810.b", - "MRAcquisitionType": "3D", - "SeriesDescription": "T1w", - "ProtocolName": "T1w", - "ScanningSequence": "GR", - "SequenceVariant": "SS_SP_SK", - "ScanOptions": "FAST_GEMS_EDR_GEMS_FILTERED_GEMS_ACC_GEMS_PFF_IR_GEMS", - "ImageType": ["ORIGINAL", "PRIMARY", "OTHER"], - "SeriesNumber": 4, - "AcquisitionTime": "18:15:17.000000", - "AcquisitionNumber": 1, - "SliceThickness": 1, - "SpacingBetweenSlices": 1, - "SAR": 0.128576, - "EchoTime": 0.001304, - "RepetitionTime": 0.003908, - "InversionTime": 1, - "FlipAngle": 9, - "PercentPhaseFOV": 80, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 320, - "PixelBandwidth": 892.875, - "ImageOrientationPatientDICOM": [ - 0.08675, - 0.99623, - -0.00073, - 0.0467, - -0.0048, - -0.9989 ], - "InPlanePhaseEncodingDirectionDICOM": "ROW", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20171215 (OpenJPEG build) Clang8.1.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "GE", + "ManufacturersModelName": "DISCOVERY_MR750w", + "InstitutionName": "JUNTENDO_UNV_HP", + "DeviceSerialNumber": "0000000000EM0236", + "StationName": "GEMR750W", + "BodyPartExamined": "CSPINE", + "PatientPosition": "HFS", + "SoftwareVersions": "27_LX_MR_Software_release:DV26.0_R02_1810.b", + "MRAcquisitionType": "3D", + "SeriesDescription": "T1w", + "ProtocolName": "T1w", + "ScanningSequence": "GR", + "SequenceVariant": "SS_SP_SK", + "ScanOptions": "FAST_GEMS_EDR_GEMS_FILTERED_GEMS_ACC_GEMS_PFF_IR_GEMS", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "OTHER" + ], + "SeriesNumber": 4, + "AcquisitionTime": "18:15:17.000000", + "AcquisitionNumber": 1, + "SliceThickness": 1, + "SpacingBetweenSlices": 1, + "SAR": 0.128576, + "EchoTime": 0.001304, + "RepetitionTime": 0.003908, + "InversionTime": 1, + "FlipAngle": 9, + "PercentPhaseFOV": 80, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 320, + "PixelBandwidth": 892.875, + "ImageOrientationPatientDICOM": [ + 0.08675, + 0.99623, + -0.00073, + 0.0467, + -0.0048, + -0.9989 + ], + "InPlanePhaseEncodingDirectionDICOM": "ROW", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20171215 (OpenJPEG build) Clang8.1.0", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-juntendo750w06/anat/sub-juntendo750w06_space-other_T2star.json b/derivatives/data_preprocessed/sub-juntendo750w06/anat/sub-juntendo750w06_space-other_T2star.json index 07d939e99d..277565961e 100644 --- a/derivatives/data_preprocessed/sub-juntendo750w06/anat/sub-juntendo750w06_space-other_T2star.json +++ b/derivatives/data_preprocessed/sub-juntendo750w06/anat/sub-juntendo750w06_space-other_T2star.json @@ -45,5 +45,9 @@ "InPlanePhaseEncodingDirectionDICOM": "COL", "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20171215 (OpenJPEG build) Clang8.1.0", - "AcquisitionDuration": 288.0 + "AcquisitionDuration": 288.0, + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-juntendo750w06/anat/sub-juntendo750w06_space-other_T2w.json b/derivatives/data_preprocessed/sub-juntendo750w06/anat/sub-juntendo750w06_space-other_T2w.json index 5e9c8668fe..0f85f5ae6f 100644 --- a/derivatives/data_preprocessed/sub-juntendo750w06/anat/sub-juntendo750w06_space-other_T2w.json +++ b/derivatives/data_preprocessed/sub-juntendo750w06/anat/sub-juntendo750w06_space-other_T2w.json @@ -1,43 +1,52 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "GE", - "ManufacturersModelName": "DISCOVERY_MR750w", - "InstitutionName": "JUNTENDO_UNV_HP", - "DeviceSerialNumber": "0000000000EM0236", - "StationName": "GEMR750W", - "BodyPartExamined": "CSPINE", - "PatientPosition": "HFS", - "SoftwareVersions": "27_LX_MR_Software_release:DV26.0_R02_1810.b", - "MRAcquisitionType": "3D", - "SeriesDescription": "T2w", - "ProtocolName": "T2w", - "ScanningSequence": "SE", - "SequenceVariant": "SK_OSP", - "ScanOptions": "FC_FREQ_AX_GEMS_FC_NPW_EDR_GEMS_FILTERED_GEMS_ACC_GEMS", - "ImageType": ["ORIGINAL", "PRIMARY", "OTHER"], - "SeriesNumber": 6, - "AcquisitionTime": "18:21:33.000000", - "AcquisitionNumber": 1, - "SliceThickness": 0.8, - "SpacingBetweenSlices": 0.8, - "SAR": 0.3145, - "EchoTime": 0.13468, - "RepetitionTime": 2.502, - "FlipAngle": 90, - "PercentPhaseFOV": 100, - "EchoTrainLength": 78, - "AcquisitionMatrixPE": 320, - "ReconMatrixPE": 320, - "PixelBandwidth": 520.812, - "ImageOrientationPatientDICOM": [ - 0.06372, - 0.99797, - -0.00034, - 0.05321, - -0.00374, - -0.99858 ], - "InPlanePhaseEncodingDirectionDICOM": "ROW", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20171215 (OpenJPEG build) Clang8.1.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "GE", + "ManufacturersModelName": "DISCOVERY_MR750w", + "InstitutionName": "JUNTENDO_UNV_HP", + "DeviceSerialNumber": "0000000000EM0236", + "StationName": "GEMR750W", + "BodyPartExamined": "CSPINE", + "PatientPosition": "HFS", + "SoftwareVersions": "27_LX_MR_Software_release:DV26.0_R02_1810.b", + "MRAcquisitionType": "3D", + "SeriesDescription": "T2w", + "ProtocolName": "T2w", + "ScanningSequence": "SE", + "SequenceVariant": "SK_OSP", + "ScanOptions": "FC_FREQ_AX_GEMS_FC_NPW_EDR_GEMS_FILTERED_GEMS_ACC_GEMS", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "OTHER" + ], + "SeriesNumber": 6, + "AcquisitionTime": "18:21:33.000000", + "AcquisitionNumber": 1, + "SliceThickness": 0.8, + "SpacingBetweenSlices": 0.8, + "SAR": 0.3145, + "EchoTime": 0.13468, + "RepetitionTime": 2.502, + "FlipAngle": 90, + "PercentPhaseFOV": 100, + "EchoTrainLength": 78, + "AcquisitionMatrixPE": 320, + "ReconMatrixPE": 320, + "PixelBandwidth": 520.812, + "ImageOrientationPatientDICOM": [ + 0.06372, + 0.99797, + -0.00034, + 0.05321, + -0.00374, + -0.99858 + ], + "InPlanePhaseEncodingDirectionDICOM": "ROW", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20171215 (OpenJPEG build) Clang8.1.0", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-mgh01/anat/sub-mgh01_flip-1_mt-on_space-other_MTS.json b/derivatives/data_preprocessed/sub-mgh01/anat/sub-mgh01_flip-1_mt-on_space-other_MTS.json index 9ed99b40cf..dfa2c1ee35 100644 --- a/derivatives/data_preprocessed/sub-mgh01/anat/sub-mgh01_flip-1_mt-on_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-mgh01/anat/sub-mgh01_flip-1_mt-on_space-other_MTS.json @@ -1,66 +1,76 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.254, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Skyra", - "InstitutionName": "Martinos_Center_Bay_1", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "13th_149_Charlestown_MA_US_02129", - "DeviceSerialNumber": "45407", - "StationName": "BAY1OC", - "BodyPartExamined": "BRAIN", - "PatientPosition": "HFS", - "ProcedureStepDescription": "INVESTIGATORS_Barry", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-MT1", - "ProtocolName": "GRE-MT1", - "ScanningSequence": "GR", - "SequenceVariant": "MTC_SP", - "ScanOptions": "MT", - "SequenceName": "_fl3d1", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "DIS2D"], - "SeriesNumber": 5, - "AcquisitionTime": "15:30:15.007500", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SAR": 0.492674, - "EchoTime": 0.00313, - "RepetitionTime": 0.035, - "FlipAngle": 9, - "PartialFourier": 1, - "BaseResolution": 256, - "ShimSetting": [ - -4977, - 11796, - -12033, - -1529, - -246, - 4999, - -1524, - -104 ], - "TxRefAmp": 348.107, - "PhaseResolution": 1, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC7;NC1,2", - "CoilString": "HC7;NC1_2", - "PulseSequenceDetails": "%SiemensSeq%_gre", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 100, - "PhaseEncodingSteps": 255, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 256, - "PixelBandwidth": 260, - "DwellTime": 7.5e-06, - "ImageOrientationPatientDICOM": [ - 0.999194, - 0, - -0.0401318, - 0, - 1, - 0 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181125 (JP2:OpenJPEG) (JP-LS:CharLS) Clang8.1.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 123.254, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Skyra", + "InstitutionName": "Martinos_Center_Bay_1", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "13th_149_Charlestown_MA_US_02129", + "DeviceSerialNumber": "45407", + "StationName": "BAY1OC", + "BodyPartExamined": "BRAIN", + "PatientPosition": "HFS", + "ProcedureStepDescription": "INVESTIGATORS_Barry", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-MT1", + "ProtocolName": "GRE-MT1", + "ScanningSequence": "GR", + "SequenceVariant": "MTC_SP", + "ScanOptions": "MT", + "SequenceName": "_fl3d1", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "DIS2D" + ], + "SeriesNumber": 5, + "AcquisitionTime": "15:30:15.007500", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SAR": 0.492674, + "EchoTime": 0.00313, + "RepetitionTime": 0.035, + "FlipAngle": 9, + "PartialFourier": 1, + "BaseResolution": 256, + "ShimSetting": [ + -4977, + 11796, + -12033, + -1529, + -246, + 4999, + -1524, + -104 + ], + "TxRefAmp": 348.107, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC7;NC1,2", + "CoilString": "HC7;NC1_2", + "PulseSequenceDetails": "%SiemensSeq%_gre", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 255, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "PixelBandwidth": 260, + "DwellTime": 7.5e-06, + "ImageOrientationPatientDICOM": [ + 0.999194, + 0, + -0.0401318, + 0, + 1, + 0 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181125 (JP2:OpenJPEG) (JP-LS:CharLS) Clang8.1.0", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-mgh01/anat/sub-mgh01_flip-2_mt-off_space-other_MTS.json b/derivatives/data_preprocessed/sub-mgh01/anat/sub-mgh01_flip-2_mt-off_space-other_MTS.json index ba96bbe031..7780a9e458 100644 --- a/derivatives/data_preprocessed/sub-mgh01/anat/sub-mgh01_flip-2_mt-off_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-mgh01/anat/sub-mgh01_flip-2_mt-off_space-other_MTS.json @@ -1,65 +1,75 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.254, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Skyra", - "InstitutionName": "Martinos_Center_Bay_1", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "13th_149_Charlestown_MA_US_02129", - "DeviceSerialNumber": "45407", - "StationName": "BAY1OC", - "BodyPartExamined": "BRAIN", - "PatientPosition": "HFS", - "ProcedureStepDescription": "INVESTIGATORS_Barry", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-T1w", - "ProtocolName": "GRE-T1w", - "ScanningSequence": "GR", - "SequenceVariant": "SP", - "SequenceName": "_fl3d1", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "DIS2D"], - "SeriesNumber": 7, - "AcquisitionTime": "15:35:5.037500", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SAR": 0.0319434, - "EchoTime": 0.00313, - "RepetitionTime": 0.015, - "FlipAngle": 15, - "PartialFourier": 1, - "BaseResolution": 256, - "ShimSetting": [ - -4977, - 11796, - -12033, - -1529, - -246, - 4999, - -1524, - -104 ], - "TxRefAmp": 348.107, - "PhaseResolution": 1, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC7;NC1,2", - "CoilString": "HC7;NC1_2", - "PulseSequenceDetails": "%SiemensSeq%_gre", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 100, - "PhaseEncodingSteps": 255, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 256, - "PixelBandwidth": 260, - "DwellTime": 7.5e-06, - "ImageOrientationPatientDICOM": [ - 0.999194, - 0, - -0.0401318, - 0, - 1, - 0 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181125 (JP2:OpenJPEG) (JP-LS:CharLS) Clang8.1.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 123.254, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Skyra", + "InstitutionName": "Martinos_Center_Bay_1", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "13th_149_Charlestown_MA_US_02129", + "DeviceSerialNumber": "45407", + "StationName": "BAY1OC", + "BodyPartExamined": "BRAIN", + "PatientPosition": "HFS", + "ProcedureStepDescription": "INVESTIGATORS_Barry", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-T1w", + "ProtocolName": "GRE-T1w", + "ScanningSequence": "GR", + "SequenceVariant": "SP", + "SequenceName": "_fl3d1", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "DIS2D" + ], + "SeriesNumber": 7, + "AcquisitionTime": "15:35:5.037500", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SAR": 0.0319434, + "EchoTime": 0.00313, + "RepetitionTime": 0.015, + "FlipAngle": 15, + "PartialFourier": 1, + "BaseResolution": 256, + "ShimSetting": [ + -4977, + 11796, + -12033, + -1529, + -246, + 4999, + -1524, + -104 + ], + "TxRefAmp": 348.107, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC7;NC1,2", + "CoilString": "HC7;NC1_2", + "PulseSequenceDetails": "%SiemensSeq%_gre", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 255, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "PixelBandwidth": 260, + "DwellTime": 7.5e-06, + "ImageOrientationPatientDICOM": [ + 0.999194, + 0, + -0.0401318, + 0, + 1, + 0 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181125 (JP2:OpenJPEG) (JP-LS:CharLS) Clang8.1.0", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-mgh01/anat/sub-mgh01_space-other_T1w.json b/derivatives/data_preprocessed/sub-mgh01/anat/sub-mgh01_space-other_T1w.json index 7da1171e22..91de1dcb75 100644 --- a/derivatives/data_preprocessed/sub-mgh01/anat/sub-mgh01_space-other_T1w.json +++ b/derivatives/data_preprocessed/sub-mgh01/anat/sub-mgh01_space-other_T1w.json @@ -1,67 +1,80 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.254, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Skyra", - "InstitutionName": "Martinos_Center_Bay_1", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "13th_149_Charlestown_MA_US_02129", - "DeviceSerialNumber": "45407", - "StationName": "BAY1OC", - "BodyPartExamined": "BRAIN", - "PatientPosition": "HFS", - "ProcedureStepDescription": "INVESTIGATORS_Barry", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "T1w", - "ProtocolName": "T1w", - "ScanningSequence": "GR_IR", - "SequenceVariant": "SK_SP_MP", - "ScanOptions": "IR", - "SequenceName": "_tfl3d1_16", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS3D", "DIS2D"], - "SeriesNumber": 2, - "AcquisitionTime": "15:13:28.092500", - "AcquisitionNumber": 1, - "SliceThickness": 1, - "SAR": 0.0603763, - "EchoTime": 0.00372, - "RepetitionTime": 2, - "InversionTime": 1, - "FlipAngle": 9, - "PartialFourier": 1, - "BaseResolution": 320, - "ShimSetting": [ - -5032, - 11836, - -12111, - 59, - -651, - 142, - -25, - 75 ], - "TxRefAmp": 339.508, - "PhaseResolution": 1, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC1-7;NC1,2", - "CoilString": "HC1-7;NC1_2", - "PulseSequenceDetails": "%SiemensSeq%_tfl", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 81.25, - "PhaseEncodingSteps": 259, - "AcquisitionMatrixPE": 260, - "ReconMatrixPE": 320, - "PixelBandwidth": 150, - "DwellTime": 1.04e-05, - "ImageOrientationPatientDICOM": [ - 0, - 1, - 0, - 0.0209424, - 0, - -0.999781 ], - "InPlanePhaseEncodingDirectionDICOM": "ROW", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181125 (JP2:OpenJPEG) (JP-LS:CharLS) Clang8.1.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 123.254, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Skyra", + "InstitutionName": "Martinos_Center_Bay_1", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "13th_149_Charlestown_MA_US_02129", + "DeviceSerialNumber": "45407", + "StationName": "BAY1OC", + "BodyPartExamined": "BRAIN", + "PatientPosition": "HFS", + "ProcedureStepDescription": "INVESTIGATORS_Barry", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "T1w", + "ProtocolName": "T1w", + "ScanningSequence": "GR_IR", + "SequenceVariant": "SK_SP_MP", + "ScanOptions": "IR", + "SequenceName": "_tfl3d1_16", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS3D", + "DIS2D" + ], + "SeriesNumber": 2, + "AcquisitionTime": "15:13:28.092500", + "AcquisitionNumber": 1, + "SliceThickness": 1, + "SAR": 0.0603763, + "EchoTime": 0.00372, + "RepetitionTime": 2, + "InversionTime": 1, + "FlipAngle": 9, + "PartialFourier": 1, + "BaseResolution": 320, + "ShimSetting": [ + -5032, + 11836, + -12111, + 59, + -651, + 142, + -25, + 75 + ], + "TxRefAmp": 339.508, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC1-7;NC1,2", + "CoilString": "HC1-7;NC1_2", + "PulseSequenceDetails": "%SiemensSeq%_tfl", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 81.25, + "PhaseEncodingSteps": 259, + "AcquisitionMatrixPE": 260, + "ReconMatrixPE": 320, + "PixelBandwidth": 150, + "DwellTime": 1.04e-05, + "ImageOrientationPatientDICOM": [ + 0, + 1, + 0, + 0.0209424, + 0, + -0.999781 + ], + "InPlanePhaseEncodingDirectionDICOM": "ROW", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181125 (JP2:OpenJPEG) (JP-LS:CharLS) Clang8.1.0", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-mgh01/anat/sub-mgh01_space-other_T2star.json b/derivatives/data_preprocessed/sub-mgh01/anat/sub-mgh01_space-other_T2star.json index 78698b7788..9eeabdd118 100644 --- a/derivatives/data_preprocessed/sub-mgh01/anat/sub-mgh01_space-other_T2star.json +++ b/derivatives/data_preprocessed/sub-mgh01/anat/sub-mgh01_space-other_T2star.json @@ -75,5 +75,9 @@ "InPlanePhaseEncodingDirectionDICOM": "COL", "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20181125 (JP2:OpenJPEG) (JP-LS:CharLS) Clang8.1.0", - "AcquisitionDuration": 285.0 + "AcquisitionDuration": 285.0, + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-mgh01/anat/sub-mgh01_space-other_T2w.json b/derivatives/data_preprocessed/sub-mgh01/anat/sub-mgh01_space-other_T2w.json index 39c42db2c1..ae7df0a580 100644 --- a/derivatives/data_preprocessed/sub-mgh01/anat/sub-mgh01_space-other_T2w.json +++ b/derivatives/data_preprocessed/sub-mgh01/anat/sub-mgh01_space-other_T2w.json @@ -1,68 +1,81 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.254, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Skyra", - "InstitutionName": "Martinos_Center_Bay_1", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "13th_149_Charlestown_MA_US_02129", - "DeviceSerialNumber": "45407", - "StationName": "BAY1OC", - "BodyPartExamined": "BRAIN", - "PatientPosition": "HFS", - "ProcedureStepDescription": "INVESTIGATORS_Barry", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "T2w", - "ProtocolName": "T2w", - "ScanningSequence": "SE", - "SequenceVariant": "SK_SP_OSP", - "ScanOptions": "PFP", - "SequenceName": "_spcR_100", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS3D", "DIS2D"], - "SeriesNumber": 3, - "AcquisitionTime": "15:19:44.887500", - "AcquisitionNumber": 1, - "SliceThickness": 0.8, - "SAR": 0.498124, - "EchoTime": 0.12, - "RepetitionTime": 1.5, - "FlipAngle": 120, - "PartialFourier": 1, - "BaseResolution": 320, - "ShimSetting": [ - -5032, - 11836, - -12111, - 59, - -651, - 142, - -25, - 75 ], - "TxRefAmp": 348.107, - "PhaseResolution": 1, - "PhaseOversampling": 0.8, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC5-7;NC1,2", - "CoilString": "HC5-7;NC1_2", - "PulseSequenceDetails": "%SiemensSeq%_tse_vfl", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 100, - "EchoTrainLength": 76, - "PhaseEncodingSteps": 422, - "AcquisitionMatrixPE": 320, - "ReconMatrixPE": 320, - "PixelBandwidth": 625, - "DwellTime": 2.5e-06, - "ImageOrientationPatientDICOM": [ - 1.11e-13, - 1, - 4.895e-12, - -0.0226874, - 4.897e-12, - -0.999743 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181125 (JP2:OpenJPEG) (JP-LS:CharLS) Clang8.1.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 123.254, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Skyra", + "InstitutionName": "Martinos_Center_Bay_1", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "13th_149_Charlestown_MA_US_02129", + "DeviceSerialNumber": "45407", + "StationName": "BAY1OC", + "BodyPartExamined": "BRAIN", + "PatientPosition": "HFS", + "ProcedureStepDescription": "INVESTIGATORS_Barry", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "T2w", + "ProtocolName": "T2w", + "ScanningSequence": "SE", + "SequenceVariant": "SK_SP_OSP", + "ScanOptions": "PFP", + "SequenceName": "_spcR_100", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS3D", + "DIS2D" + ], + "SeriesNumber": 3, + "AcquisitionTime": "15:19:44.887500", + "AcquisitionNumber": 1, + "SliceThickness": 0.8, + "SAR": 0.498124, + "EchoTime": 0.12, + "RepetitionTime": 1.5, + "FlipAngle": 120, + "PartialFourier": 1, + "BaseResolution": 320, + "ShimSetting": [ + -5032, + 11836, + -12111, + 59, + -651, + 142, + -25, + 75 + ], + "TxRefAmp": 348.107, + "PhaseResolution": 1, + "PhaseOversampling": 0.8, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC5-7;NC1,2", + "CoilString": "HC5-7;NC1_2", + "PulseSequenceDetails": "%SiemensSeq%_tse_vfl", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "EchoTrainLength": 76, + "PhaseEncodingSteps": 422, + "AcquisitionMatrixPE": 320, + "ReconMatrixPE": 320, + "PixelBandwidth": 625, + "DwellTime": 2.5e-06, + "ImageOrientationPatientDICOM": [ + 1.11e-13, + 1, + 4.895e-12, + -0.0226874, + 4.897e-12, + -0.999743 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181125 (JP2:OpenJPEG) (JP-LS:CharLS) Clang8.1.0", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-mgh02/anat/sub-mgh02_flip-1_mt-on_space-other_MTS.json b/derivatives/data_preprocessed/sub-mgh02/anat/sub-mgh02_flip-1_mt-on_space-other_MTS.json index 6a849a3107..a6c48a7882 100644 --- a/derivatives/data_preprocessed/sub-mgh02/anat/sub-mgh02_flip-1_mt-on_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-mgh02/anat/sub-mgh02_flip-1_mt-on_space-other_MTS.json @@ 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"InstitutionalDepartmentName": "Department", + "InstitutionAddress": "13th_149_Charlestown_MA_US_02129", + "DeviceSerialNumber": "45407", + "StationName": "BAY1OC", + "BodyPartExamined": "BRAIN", + "PatientPosition": "HFS", + "ProcedureStepDescription": "INVESTIGATORS_Barry", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-MT1", + "ProtocolName": "GRE-MT1", + "ScanningSequence": "GR", + "SequenceVariant": "MTC_SP", + "ScanOptions": "MT", + "SequenceName": "_fl3d1", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "DIS2D" + ], + "SeriesNumber": 5, + "AcquisitionTime": "15:50:28.057500", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SAR": 0.685302, + "EchoTime": 0.00313, + "RepetitionTime": 0.035, + "FlipAngle": 9, + "PartialFourier": 1, + "BaseResolution": 256, + "ShimSetting": [ + -4956, + 12117, + -11448, + -870, + -920, + 4999, + -2385, + 859 + ], + "TxRefAmp": 351.858, + "PhaseResolution": 1, + "ReceiveCoilName": 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a/derivatives/data_preprocessed/sub-mgh02/anat/sub-mgh02_flip-2_mt-off_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-mgh02/anat/sub-mgh02_flip-2_mt-off_space-other_MTS.json @@ -1,65 +1,75 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.254, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Skyra", - "InstitutionName": "Martinos_Center_Bay_1", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "13th_149_Charlestown_MA_US_02129", - "DeviceSerialNumber": "45407", - "StationName": "BAY1OC", - "BodyPartExamined": "BRAIN", - "PatientPosition": "HFS", - "ProcedureStepDescription": "INVESTIGATORS_Barry", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-T1w", - "ProtocolName": "GRE-T1w", - "ScanningSequence": "GR", - "SequenceVariant": "SP", - "SequenceName": "_fl3d1", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "DIS2D"], - "SeriesNumber": 7, - "AcquisitionTime": 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"MagneticFieldStrength": 3, + "ImagingFrequency": 123.254, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Skyra", + "InstitutionName": "Martinos_Center_Bay_1", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "13th_149_Charlestown_MA_US_02129", + "DeviceSerialNumber": "45407", + "StationName": "BAY1OC", + "BodyPartExamined": "BRAIN", + "PatientPosition": "HFS", + "ProcedureStepDescription": "INVESTIGATORS_Barry", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-T1w", + "ProtocolName": "GRE-T1w", + "ScanningSequence": "GR", + "SequenceVariant": "SP", + "SequenceName": "_fl3d1", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "DIS2D" + ], + "SeriesNumber": 7, + "AcquisitionTime": "15:54:54.170000", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SAR": 0.0444329, + "EchoTime": 0.00313, + "RepetitionTime": 0.015, + "FlipAngle": 15, + "PartialFourier": 1, + "BaseResolution": 256, + "ShimSetting": [ + -4956, + 12117, + -11448, + -870, + -920, + 4999, + -2385, + 859 + ], + "TxRefAmp": 351.858, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC5-7;NC1,2", + "CoilString": "HC5-7;NC1_2", + "PulseSequenceDetails": "%SiemensSeq%_gre", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 255, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "PixelBandwidth": 260, + "DwellTime": 7.5e-06, + "ImageOrientationPatientDICOM": [ + 1, + 0, + 0, + 0, + 0.998719, + -0.0505929 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181125 (JP2:OpenJPEG) (JP-LS:CharLS) Clang8.1.0", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-mgh02/anat/sub-mgh02_space-other_T1w.json b/derivatives/data_preprocessed/sub-mgh02/anat/sub-mgh02_space-other_T1w.json index ca8f178eb1..dba7856a38 100644 --- a/derivatives/data_preprocessed/sub-mgh02/anat/sub-mgh02_space-other_T1w.json +++ b/derivatives/data_preprocessed/sub-mgh02/anat/sub-mgh02_space-other_T1w.json @@ -1,67 +1,80 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.254, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Skyra", - "InstitutionName": "Martinos_Center_Bay_1", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "13th_149_Charlestown_MA_US_02129", - "DeviceSerialNumber": "45407", - "StationName": "BAY1OC", - "BodyPartExamined": "BRAIN", - "PatientPosition": "HFS", - "ProcedureStepDescription": "INVESTIGATORS_Barry", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "T1w", - "ProtocolName": "T1w", - "ScanningSequence": "GR_IR", - "SequenceVariant": "SK_SP_MP", - "ScanOptions": "IR", - "SequenceName": "_tfl3d1_16", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS3D", "DIS2D"], - 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-} + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 123.254, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Skyra", + "InstitutionName": "Martinos_Center_Bay_1", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "13th_149_Charlestown_MA_US_02129", + "DeviceSerialNumber": "45407", + "StationName": "BAY1OC", + "BodyPartExamined": "BRAIN", + "PatientPosition": "HFS", + "ProcedureStepDescription": "INVESTIGATORS_Barry", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "T1w", + "ProtocolName": "T1w", + "ScanningSequence": "GR_IR", + "SequenceVariant": "SK_SP_MP", + "ScanOptions": "IR", + "SequenceName": "_tfl3d1_16", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS3D", + "DIS2D" + ], + "SeriesNumber": 2, + "AcquisitionTime": "15:34:22.110000", + "AcquisitionNumber": 1, + "SliceThickness": 1, + "SAR": 0.0818031, + "EchoTime": 0.00372, + "RepetitionTime": 2, + "InversionTime": 1, + "FlipAngle": 9, + "PartialFourier": 1, + "BaseResolution": 320, + "ShimSetting": [ + -5032, + 11836, + -12111, + 59, + -651, + 142, + -25, + 75 + ], + "TxRefAmp": 335.591, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC1-7;NC1,2", + "CoilString": "HC1-7;NC1_2", + "PulseSequenceDetails": "%SiemensSeq%_tfl", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 81.25, + "PhaseEncodingSteps": 259, + "AcquisitionMatrixPE": 260, + "ReconMatrixPE": 320, + "PixelBandwidth": 150, + "DwellTime": 1.04e-05, + "ImageOrientationPatientDICOM": [ + 0, + 1, + 0, + 0, + 0, + -1 + ], + "InPlanePhaseEncodingDirectionDICOM": "ROW", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181125 (JP2:OpenJPEG) (JP-LS:CharLS) Clang8.1.0", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-mgh02/anat/sub-mgh02_space-other_T2star.json b/derivatives/data_preprocessed/sub-mgh02/anat/sub-mgh02_space-other_T2star.json index 34408497d4..3262987052 100644 --- a/derivatives/data_preprocessed/sub-mgh02/anat/sub-mgh02_space-other_T2star.json +++ b/derivatives/data_preprocessed/sub-mgh02/anat/sub-mgh02_space-other_T2star.json @@ -75,5 +75,9 @@ "InPlanePhaseEncodingDirectionDICOM": "COL", "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20181125 (JP2:OpenJPEG) (JP-LS:CharLS) Clang8.1.0", - "AcquisitionDuration": 285.0 + "AcquisitionDuration": 285.0, + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-mgh02/anat/sub-mgh02_space-other_T2w.json b/derivatives/data_preprocessed/sub-mgh02/anat/sub-mgh02_space-other_T2w.json index 9ca5d51f67..ecb5d557df 100644 --- a/derivatives/data_preprocessed/sub-mgh02/anat/sub-mgh02_space-other_T2w.json +++ b/derivatives/data_preprocessed/sub-mgh02/anat/sub-mgh02_space-other_T2w.json @@ -1,68 +1,81 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.254, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Skyra", - "InstitutionName": "Martinos_Center_Bay_1", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "13th_149_Charlestown_MA_US_02129", - "DeviceSerialNumber": "45407", - "StationName": "BAY1OC", - "BodyPartExamined": "BRAIN", - "PatientPosition": "HFS", - "ProcedureStepDescription": "INVESTIGATORS_Barry", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "T2w", - "ProtocolName": "T2w", - "ScanningSequence": "SE", - "SequenceVariant": "SK_SP_OSP", - "ScanOptions": "PFP", - "SequenceName": "_spcR_100", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS3D", "DIS2D"], - "SeriesNumber": 3, - 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"v1.0.20181125 (JP2:OpenJPEG) (JP-LS:CharLS) Clang8.1.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 123.254, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Skyra", + "InstitutionName": "Martinos_Center_Bay_1", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "13th_149_Charlestown_MA_US_02129", + "DeviceSerialNumber": "45407", + "StationName": "BAY1OC", + "BodyPartExamined": "BRAIN", + "PatientPosition": "HFS", + "ProcedureStepDescription": "INVESTIGATORS_Barry", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "T2w", + "ProtocolName": "T2w", + "ScanningSequence": "SE", + "SequenceVariant": "SK_SP_OSP", + "ScanOptions": "PFP", + "SequenceName": "_spcR_100", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS3D", + "DIS2D" + ], + "SeriesNumber": 3, + "AcquisitionTime": "15:40:45.122500", + "AcquisitionNumber": 1, + "SliceThickness": 0.8, + "SAR": 0.692884, + 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"0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-mgh03/anat/sub-mgh03_flip-1_mt-on_space-other_MTS.json b/derivatives/data_preprocessed/sub-mgh03/anat/sub-mgh03_flip-1_mt-on_space-other_MTS.json index 0d24767ac4..9ad3ea103e 100644 --- a/derivatives/data_preprocessed/sub-mgh03/anat/sub-mgh03_flip-1_mt-on_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-mgh03/anat/sub-mgh03_flip-1_mt-on_space-other_MTS.json @@ -1,66 +1,76 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.254, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Skyra", - "InstitutionName": "Martinos_Center_Bay_1", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "13th_149_Charlestown_MA_US_02129", - "DeviceSerialNumber": "45407", - "StationName": "BAY1OC", - "BodyPartExamined": "BRAIN", - "PatientPosition": "HFS", - "ProcedureStepDescription": "INVESTIGATORS_Barry", - 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"SequenceName": "_fl3d1", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "DIS2D" + ], + "SeriesNumber": 5, + "AcquisitionTime": "14:42:39.015000", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SAR": 0.69482, + "EchoTime": 0.00313, + "RepetitionTime": 0.035, + "FlipAngle": 9, + "PartialFourier": 1, + "BaseResolution": 256, + "ShimSetting": [ + -4982, + 11981, + -11775, + -1920, + -476, + 4999, + -2210, + 361 + ], + "TxRefAmp": 369.641, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC5-7;NC1,2", + "CoilString": "HC5-7;NC1_2", + "PulseSequenceDetails": "%SiemensSeq%_gre", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 255, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "PixelBandwidth": 260, + "DwellTime": 7.5e-06, + "ImageOrientationPatientDICOM": [ + 1, + 0, + 0, + 0, + 0.978867, + 0.204496 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181125 (JP2:OpenJPEG) (JP-LS:CharLS) Clang8.1.0", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-mgh03/anat/sub-mgh03_flip-2_mt-off_space-other_MTS.json b/derivatives/data_preprocessed/sub-mgh03/anat/sub-mgh03_flip-2_mt-off_space-other_MTS.json index 20680e7f79..dfc41d8a1c 100644 --- a/derivatives/data_preprocessed/sub-mgh03/anat/sub-mgh03_flip-2_mt-off_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-mgh03/anat/sub-mgh03_flip-2_mt-off_space-other_MTS.json @@ -1,65 +1,75 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.254, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Skyra", - "InstitutionName": "Martinos_Center_Bay_1", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "13th_149_Charlestown_MA_US_02129", - "DeviceSerialNumber": "45407", - "StationName": "BAY1OC", - "BodyPartExamined": "BRAIN", - "PatientPosition": "HFS", - "ProcedureStepDescription": "INVESTIGATORS_Barry", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-T1w", - "ProtocolName": "GRE-T1w", - "ScanningSequence": "GR", - "SequenceVariant": "SP", - "SequenceName": "_fl3d1", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "DIS2D"], - "SeriesNumber": 7, - "AcquisitionTime": "14:47:23.112500", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SAR": 0.04505, - "EchoTime": 0.00313, - "RepetitionTime": 0.015, - "FlipAngle": 15, - "PartialFourier": 1, - "BaseResolution": 256, - "ShimSetting": [ - -4982, - 11981, - -11775, - -1920, - -476, - 4999, - -2210, - 361 ], - "TxRefAmp": 369.641, - "PhaseResolution": 1, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC5-7;NC1,2", - "CoilString": "HC5-7;NC1_2", - "PulseSequenceDetails": "%SiemensSeq%_gre", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 100, - 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"ScanningSequence": "GR", + "SequenceVariant": "SP", + "SequenceName": "_fl3d1", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "DIS2D" + ], + "SeriesNumber": 7, + "AcquisitionTime": "14:47:23.112500", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SAR": 0.04505, + "EchoTime": 0.00313, + "RepetitionTime": 0.015, + "FlipAngle": 15, + "PartialFourier": 1, + "BaseResolution": 256, + "ShimSetting": [ + -4982, + 11981, + -11775, + -1920, + -476, + 4999, + -2210, + 361 + ], + "TxRefAmp": 369.641, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC5-7;NC1,2", + "CoilString": "HC5-7;NC1_2", + "PulseSequenceDetails": "%SiemensSeq%_gre", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 255, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "PixelBandwidth": 260, + "DwellTime": 7.5e-06, + "ImageOrientationPatientDICOM": [ + 1, + 0, + 0, + 0, + 0.978867, + 0.204496 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181125 (JP2:OpenJPEG) (JP-LS:CharLS) Clang8.1.0", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-mgh03/anat/sub-mgh03_space-other_T1w.json b/derivatives/data_preprocessed/sub-mgh03/anat/sub-mgh03_space-other_T1w.json index 39567daa75..8edc6a274a 100644 --- a/derivatives/data_preprocessed/sub-mgh03/anat/sub-mgh03_space-other_T1w.json +++ b/derivatives/data_preprocessed/sub-mgh03/anat/sub-mgh03_space-other_T1w.json @@ -1,67 +1,80 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.254, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Skyra", - "InstitutionName": "Martinos_Center_Bay_1", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "13th_149_Charlestown_MA_US_02129", - "DeviceSerialNumber": "45407", - "StationName": "BAY1OC", - "BodyPartExamined": "BRAIN", - "PatientPosition": "HFS", - "ProcedureStepDescription": "INVESTIGATORS_Barry", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "T1w", - "ProtocolName": "T1w", - "ScanningSequence": "GR_IR", - "SequenceVariant": "SK_SP_MP", - "ScanOptions": "IR", - "SequenceName": "_tfl3d1_16", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS3D", "DIS2D"], - "SeriesNumber": 2, - "AcquisitionTime": "14:26:10.057500", - "AcquisitionNumber": 1, - "SliceThickness": 1, - "SAR": 0.0842896, - "EchoTime": 0.00372, - "RepetitionTime": 2, - "InversionTime": 1, - "FlipAngle": 9, - "PartialFourier": 1, - "BaseResolution": 320, - "ShimSetting": [ - -5032, - 11836, - -12111, - 59, - -651, - 142, - -25, - 75 ], - "TxRefAmp": 356.316, - "PhaseResolution": 1, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC1-7;NC1,2", - "CoilString": "HC1-7;NC1_2", - "PulseSequenceDetails": "%SiemensSeq%_tfl", - "ConsistencyInfo": 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+ "ProtocolName": "T1w", + "ScanningSequence": "GR_IR", + "SequenceVariant": "SK_SP_MP", + "ScanOptions": "IR", + "SequenceName": "_tfl3d1_16", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS3D", + "DIS2D" + ], + "SeriesNumber": 2, + "AcquisitionTime": "14:26:10.057500", + "AcquisitionNumber": 1, + "SliceThickness": 1, + "SAR": 0.0842896, + "EchoTime": 0.00372, + "RepetitionTime": 2, + "InversionTime": 1, + "FlipAngle": 9, + "PartialFourier": 1, + "BaseResolution": 320, + "ShimSetting": [ + -5032, + 11836, + -12111, + 59, + -651, + 142, + -25, + 75 + ], + "TxRefAmp": 356.316, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC1-7;NC1,2", + "CoilString": "HC1-7;NC1_2", + "PulseSequenceDetails": "%SiemensSeq%_tfl", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 81.25, + "PhaseEncodingSteps": 259, + "AcquisitionMatrixPE": 260, + "ReconMatrixPE": 320, + "PixelBandwidth": 150, + "DwellTime": 1.04e-05, + "ImageOrientationPatientDICOM": [ + 0, + 1, + 0, + 0, + 0, + -1 + ], + "InPlanePhaseEncodingDirectionDICOM": "ROW", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181125 (JP2:OpenJPEG) (JP-LS:CharLS) Clang8.1.0", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-mgh03/anat/sub-mgh03_space-other_T2star.json b/derivatives/data_preprocessed/sub-mgh03/anat/sub-mgh03_space-other_T2star.json index de6bfe53ea..bcf0966322 100644 --- a/derivatives/data_preprocessed/sub-mgh03/anat/sub-mgh03_space-other_T2star.json +++ b/derivatives/data_preprocessed/sub-mgh03/anat/sub-mgh03_space-other_T2star.json @@ -75,5 +75,9 @@ "InPlanePhaseEncodingDirectionDICOM": "COL", "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20181125 (JP2:OpenJPEG) (JP-LS:CharLS) Clang8.1.0", - "AcquisitionDuration": 285.0 + "AcquisitionDuration": 285.0, + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-mgh03/anat/sub-mgh03_space-other_T2w.json b/derivatives/data_preprocessed/sub-mgh03/anat/sub-mgh03_space-other_T2w.json index 08d7fa8536..4fd56c818b 100644 --- a/derivatives/data_preprocessed/sub-mgh03/anat/sub-mgh03_space-other_T2w.json +++ b/derivatives/data_preprocessed/sub-mgh03/anat/sub-mgh03_space-other_T2w.json @@ -1,68 +1,81 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.254, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Skyra", - "InstitutionName": "Martinos_Center_Bay_1", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "13th_149_Charlestown_MA_US_02129", - "DeviceSerialNumber": "45407", - "StationName": "BAY1OC", - "BodyPartExamined": "BRAIN", - "PatientPosition": "HFS", - "ProcedureStepDescription": 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"T2w", + "ScanningSequence": "SE", + "SequenceVariant": "SK_SP_OSP", + "ScanOptions": "PFP", + "SequenceName": "_spcR_100", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS3D", + "DIS2D" + ], + "SeriesNumber": 3, + "AcquisitionTime": "14:31:48.057500", + "AcquisitionNumber": 1, + "SliceThickness": 0.8, + "SAR": 0.702507, + "EchoTime": 0.12, + "RepetitionTime": 1.5, + "FlipAngle": 120, + "PartialFourier": 1, + "BaseResolution": 320, + "ShimSetting": [ + -5032, + 11836, + -12111, + 59, + -651, + 142, + -25, + 75 + ], + "TxRefAmp": 369.641, + "PhaseResolution": 1, + "PhaseOversampling": 0.8, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC5-7;NC1,2", + "CoilString": "HC5-7;NC1_2", + "PulseSequenceDetails": "%SiemensSeq%_tse_vfl", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "EchoTrainLength": 76, + "PhaseEncodingSteps": 422, + "AcquisitionMatrixPE": 320, + "ReconMatrixPE": 320, + "PixelBandwidth": 625, + "DwellTime": 2.5e-06, + "ImageOrientationPatientDICOM": [ + 1.11e-13, + 1, + 4.895e-12, + -0.0226874, + 4.897e-12, + -0.999743 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181125 (JP2:OpenJPEG) (JP-LS:CharLS) Clang8.1.0", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-mgh04/anat/sub-mgh04_flip-1_mt-on_space-other_MTS.json b/derivatives/data_preprocessed/sub-mgh04/anat/sub-mgh04_flip-1_mt-on_space-other_MTS.json index 05b252f332..b903b90412 100644 --- a/derivatives/data_preprocessed/sub-mgh04/anat/sub-mgh04_flip-1_mt-on_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-mgh04/anat/sub-mgh04_flip-1_mt-on_space-other_MTS.json @@ -1,66 +1,76 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.254, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Skyra", - "InstitutionName": "Martinos_Center_Bay_1", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "13th_149_Charlestown_MA_US_02129", - "DeviceSerialNumber": "45407", - "StationName": "BAY1OC", - "BodyPartExamined": "BRAIN", - "PatientPosition": "HFS", - "ProcedureStepDescription": "INVESTIGATORS_Barry", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-MT1", - "ProtocolName": "GRE-MT1", - "ScanningSequence": "GR", - "SequenceVariant": "MTC_SP", - "ScanOptions": "MT", - "SequenceName": "_fl3d1", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "DIS2D"], - "SeriesNumber": 5, - "AcquisitionTime": "13:31:6.062500", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SAR": 0.774328, - "EchoTime": 0.00313, - "RepetitionTime": 0.035, - "FlipAngle": 9, - "PartialFourier": 1, - "BaseResolution": 256, - "ShimSetting": [ - -5014, - 11955, - -11578, - -2356, - 494, - 3794, - -502, - -632 ], - "TxRefAmp": 407.241, - "PhaseResolution": 1, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC7;NC1,2", - "CoilString": "HC7;NC1_2", - "PulseSequenceDetails": "%SiemensSeq%_gre", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 100, - "PhaseEncodingSteps": 255, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 256, - "PixelBandwidth": 260, - "DwellTime": 7.5e-06, - "ImageOrientationPatientDICOM": [ - 0.997314, - 0, - -0.0732382, - 0, - 1, - 0 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181125 (JP2:OpenJPEG) (JP-LS:CharLS) Clang8.1.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 123.254, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Skyra", + "InstitutionName": "Martinos_Center_Bay_1", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "13th_149_Charlestown_MA_US_02129", + "DeviceSerialNumber": "45407", + "StationName": "BAY1OC", + "BodyPartExamined": "BRAIN", + "PatientPosition": "HFS", + "ProcedureStepDescription": "INVESTIGATORS_Barry", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-MT1", + "ProtocolName": "GRE-MT1", + "ScanningSequence": "GR", + "SequenceVariant": "MTC_SP", + "ScanOptions": "MT", + "SequenceName": "_fl3d1", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "DIS2D" + ], + "SeriesNumber": 5, + "AcquisitionTime": "13:31:6.062500", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SAR": 0.774328, + "EchoTime": 0.00313, + "RepetitionTime": 0.035, + "FlipAngle": 9, + "PartialFourier": 1, + "BaseResolution": 256, + "ShimSetting": [ + -5014, + 11955, + -11578, + -2356, + 494, + 3794, + -502, + -632 + ], + "TxRefAmp": 407.241, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC7;NC1,2", + "CoilString": "HC7;NC1_2", + "PulseSequenceDetails": "%SiemensSeq%_gre", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 255, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "PixelBandwidth": 260, + "DwellTime": 7.5e-06, + "ImageOrientationPatientDICOM": [ + 0.997314, + 0, + -0.0732382, + 0, + 1, + 0 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181125 (JP2:OpenJPEG) (JP-LS:CharLS) Clang8.1.0", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-mgh04/anat/sub-mgh04_flip-2_mt-off_space-other_MTS.json b/derivatives/data_preprocessed/sub-mgh04/anat/sub-mgh04_flip-2_mt-off_space-other_MTS.json index bc5572fa9a..f83abc16af 100644 --- a/derivatives/data_preprocessed/sub-mgh04/anat/sub-mgh04_flip-2_mt-off_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-mgh04/anat/sub-mgh04_flip-2_mt-off_space-other_MTS.json @@ -1,65 +1,75 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.254, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Skyra", - "InstitutionName": "Martinos_Center_Bay_1", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "13th_149_Charlestown_MA_US_02129", - "DeviceSerialNumber": "45407", - "StationName": "BAY1OC", - "BodyPartExamined": "BRAIN", - "PatientPosition": "HFS", - "ProcedureStepDescription": "INVESTIGATORS_Barry", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-T1w", - "ProtocolName": "GRE-T1w", - "ScanningSequence": "GR", - "SequenceVariant": "SP", - "SequenceName": "_fl3d1", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "DIS2D"], - "SeriesNumber": 7, - "AcquisitionTime": "13:35:32.440000", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SAR": 0.050205, - "EchoTime": 0.00313, - "RepetitionTime": 0.015, - "FlipAngle": 15, - "PartialFourier": 1, - "BaseResolution": 256, - "ShimSetting": [ - -5014, - 11955, - -11578, - -2356, - 494, - 3794, - -502, - -632 ], - "TxRefAmp": 407.241, - "PhaseResolution": 1, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC7;NC1,2", - "CoilString": "HC7;NC1_2", - "PulseSequenceDetails": "%SiemensSeq%_gre", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 100, - "PhaseEncodingSteps": 255, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 256, - "PixelBandwidth": 260, - "DwellTime": 7.5e-06, - "ImageOrientationPatientDICOM": [ - 0.997314, - 0, - -0.0732382, - 0, - 1, - 0 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181125 (JP2:OpenJPEG) (JP-LS:CharLS) Clang8.1.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 123.254, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Skyra", + "InstitutionName": "Martinos_Center_Bay_1", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "13th_149_Charlestown_MA_US_02129", + "DeviceSerialNumber": "45407", + "StationName": "BAY1OC", + "BodyPartExamined": "BRAIN", + "PatientPosition": "HFS", + "ProcedureStepDescription": "INVESTIGATORS_Barry", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-T1w", + "ProtocolName": "GRE-T1w", + "ScanningSequence": "GR", + "SequenceVariant": "SP", + "SequenceName": "_fl3d1", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "DIS2D" + ], + "SeriesNumber": 7, + "AcquisitionTime": "13:35:32.440000", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SAR": 0.050205, + "EchoTime": 0.00313, + "RepetitionTime": 0.015, + "FlipAngle": 15, + "PartialFourier": 1, + "BaseResolution": 256, + "ShimSetting": [ + -5014, + 11955, + -11578, + -2356, + 494, + 3794, + -502, + -632 + ], + "TxRefAmp": 407.241, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC7;NC1,2", + "CoilString": "HC7;NC1_2", + "PulseSequenceDetails": "%SiemensSeq%_gre", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 255, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "PixelBandwidth": 260, + "DwellTime": 7.5e-06, + "ImageOrientationPatientDICOM": [ + 0.997314, + 0, + -0.0732382, + 0, + 1, + 0 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181125 (JP2:OpenJPEG) (JP-LS:CharLS) Clang8.1.0", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-mgh04/anat/sub-mgh04_space-other_T1w.json b/derivatives/data_preprocessed/sub-mgh04/anat/sub-mgh04_space-other_T1w.json index c2752f44e6..bea9411c8b 100644 --- a/derivatives/data_preprocessed/sub-mgh04/anat/sub-mgh04_space-other_T1w.json +++ b/derivatives/data_preprocessed/sub-mgh04/anat/sub-mgh04_space-other_T1w.json @@ -1,67 +1,80 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.254, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Skyra", - "InstitutionName": "Martinos_Center_Bay_1", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "13th_149_Charlestown_MA_US_02129", - "DeviceSerialNumber": "45407", - "StationName": "BAY1OC", - "BodyPartExamined": "BRAIN", - "PatientPosition": "HFS", - "ProcedureStepDescription": "INVESTIGATORS_Barry", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "T1w", - "ProtocolName": "T1w", - "ScanningSequence": "GR_IR", - "SequenceVariant": "SK_SP_MP", - "ScanOptions": "IR", - "SequenceName": "_tfl3d1_16", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS3D", "DIS2D"], - "SeriesNumber": 2, - "AcquisitionTime": "13:12:20.097500", - "AcquisitionNumber": 1, - "SliceThickness": 1, - "SAR": 0.0833139, - "EchoTime": 0.00372, - "RepetitionTime": 2, - "InversionTime": 1, - "FlipAngle": 9, - "PartialFourier": 1, - "BaseResolution": 320, - "ShimSetting": [ - -5032, - 11836, - -12111, - 59, - -651, - 142, - -25, - 75 ], - "TxRefAmp": 377.234, - "PhaseResolution": 1, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC1-7;NC1,2", - "CoilString": "HC1-7;NC1_2", - "PulseSequenceDetails": "%SiemensSeq%_tfl", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 81.25, - "PhaseEncodingSteps": 259, - "AcquisitionMatrixPE": 260, - "ReconMatrixPE": 320, - "PixelBandwidth": 150, - "DwellTime": 1.04e-05, - "ImageOrientationPatientDICOM": [ - 0, - 1, - 0, - -0.0174524, - 0, - -0.999848 ], - "InPlanePhaseEncodingDirectionDICOM": "ROW", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181125 (JP2:OpenJPEG) (JP-LS:CharLS) Clang8.1.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 123.254, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Skyra", + "InstitutionName": "Martinos_Center_Bay_1", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "13th_149_Charlestown_MA_US_02129", + "DeviceSerialNumber": "45407", + "StationName": "BAY1OC", + "BodyPartExamined": "BRAIN", + "PatientPosition": "HFS", + "ProcedureStepDescription": "INVESTIGATORS_Barry", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "T1w", + "ProtocolName": "T1w", + "ScanningSequence": "GR_IR", + "SequenceVariant": "SK_SP_MP", + "ScanOptions": "IR", + "SequenceName": "_tfl3d1_16", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS3D", + "DIS2D" + ], + "SeriesNumber": 2, + "AcquisitionTime": "13:12:20.097500", + "AcquisitionNumber": 1, + "SliceThickness": 1, + "SAR": 0.0833139, + "EchoTime": 0.00372, + "RepetitionTime": 2, + "InversionTime": 1, + "FlipAngle": 9, + "PartialFourier": 1, + "BaseResolution": 320, + "ShimSetting": [ + -5032, + 11836, + -12111, + 59, + -651, + 142, + -25, + 75 + ], + "TxRefAmp": 377.234, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC1-7;NC1,2", + "CoilString": "HC1-7;NC1_2", + "PulseSequenceDetails": "%SiemensSeq%_tfl", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 81.25, + "PhaseEncodingSteps": 259, + "AcquisitionMatrixPE": 260, + "ReconMatrixPE": 320, + "PixelBandwidth": 150, + "DwellTime": 1.04e-05, + "ImageOrientationPatientDICOM": [ + 0, + 1, + 0, + -0.0174524, + 0, + -0.999848 + ], + "InPlanePhaseEncodingDirectionDICOM": "ROW", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181125 (JP2:OpenJPEG) (JP-LS:CharLS) Clang8.1.0", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-mgh04/anat/sub-mgh04_space-other_T2star.json b/derivatives/data_preprocessed/sub-mgh04/anat/sub-mgh04_space-other_T2star.json index e5df7bd2f8..5b10ccdd74 100644 --- a/derivatives/data_preprocessed/sub-mgh04/anat/sub-mgh04_space-other_T2star.json +++ b/derivatives/data_preprocessed/sub-mgh04/anat/sub-mgh04_space-other_T2star.json @@ -75,5 +75,9 @@ "InPlanePhaseEncodingDirectionDICOM": "COL", "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20181125 (JP2:OpenJPEG) (JP-LS:CharLS) Clang8.1.0", - "AcquisitionDuration": 285.0 + "AcquisitionDuration": 285.0, + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-mgh04/anat/sub-mgh04_space-other_T2w.json b/derivatives/data_preprocessed/sub-mgh04/anat/sub-mgh04_space-other_T2w.json index 4a26fe454f..f200acba8f 100644 --- a/derivatives/data_preprocessed/sub-mgh04/anat/sub-mgh04_space-other_T2w.json +++ b/derivatives/data_preprocessed/sub-mgh04/anat/sub-mgh04_space-other_T2w.json @@ -1,68 +1,81 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.254, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Skyra", - "InstitutionName": "Martinos_Center_Bay_1", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "13th_149_Charlestown_MA_US_02129", - "DeviceSerialNumber": "45407", - "StationName": "BAY1OC", - "BodyPartExamined": "BRAIN", - "PatientPosition": "HFS", - "ProcedureStepDescription": "INVESTIGATORS_Barry", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "T2w", - "ProtocolName": "T2w", - "ScanningSequence": "SE", - "SequenceVariant": "SK_SP_OSP", - "ScanOptions": "PFP", - "SequenceName": "_spcR_100", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS3D", "DIS2D"], - "SeriesNumber": 3, - "AcquisitionTime": "13:18:50.240000", - "AcquisitionNumber": 1, - "SliceThickness": 0.8, - "SAR": 0.782894, - "EchoTime": 0.12, - "RepetitionTime": 1.5, - "FlipAngle": 120, - "PartialFourier": 1, - "BaseResolution": 320, - "ShimSetting": [ - -5032, - 11836, - -12111, - 59, - -651, - 142, - -25, - 75 ], - "TxRefAmp": 407.241, - "PhaseResolution": 1, - "PhaseOversampling": 0.8, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC5-7;NC1,2", - "CoilString": "HC5-7;NC1_2", - "PulseSequenceDetails": "%SiemensSeq%_tse_vfl", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 100, - "EchoTrainLength": 76, - "PhaseEncodingSteps": 422, - "AcquisitionMatrixPE": 320, - "ReconMatrixPE": 320, - "PixelBandwidth": 625, - "DwellTime": 2.5e-06, - "ImageOrientationPatientDICOM": [ - 1.11e-13, - 1, - 4.895e-12, - -0.0226874, - 4.897e-12, - -0.999743 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181125 (JP2:OpenJPEG) (JP-LS:CharLS) Clang8.1.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 123.254, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Skyra", + "InstitutionName": "Martinos_Center_Bay_1", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "13th_149_Charlestown_MA_US_02129", + "DeviceSerialNumber": "45407", + "StationName": "BAY1OC", + "BodyPartExamined": "BRAIN", + "PatientPosition": "HFS", + "ProcedureStepDescription": "INVESTIGATORS_Barry", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "T2w", + "ProtocolName": "T2w", + "ScanningSequence": "SE", + "SequenceVariant": "SK_SP_OSP", + "ScanOptions": "PFP", + "SequenceName": "_spcR_100", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS3D", + "DIS2D" + ], + "SeriesNumber": 3, + "AcquisitionTime": "13:18:50.240000", + "AcquisitionNumber": 1, + "SliceThickness": 0.8, + "SAR": 0.782894, + "EchoTime": 0.12, + "RepetitionTime": 1.5, + "FlipAngle": 120, + "PartialFourier": 1, + "BaseResolution": 320, + "ShimSetting": [ + -5032, + 11836, + -12111, + 59, + -651, + 142, + -25, + 75 + ], + "TxRefAmp": 407.241, + "PhaseResolution": 1, + "PhaseOversampling": 0.8, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC5-7;NC1,2", + "CoilString": "HC5-7;NC1_2", + "PulseSequenceDetails": "%SiemensSeq%_tse_vfl", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "EchoTrainLength": 76, + "PhaseEncodingSteps": 422, + "AcquisitionMatrixPE": 320, + "ReconMatrixPE": 320, + "PixelBandwidth": 625, + "DwellTime": 2.5e-06, + "ImageOrientationPatientDICOM": [ + 1.11e-13, + 1, + 4.895e-12, + -0.0226874, + 4.897e-12, + -0.999743 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181125 (JP2:OpenJPEG) (JP-LS:CharLS) Clang8.1.0", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-mgh05/anat/sub-mgh05_flip-1_mt-on_space-other_MTS.json b/derivatives/data_preprocessed/sub-mgh05/anat/sub-mgh05_flip-1_mt-on_space-other_MTS.json index d6ac2bc6c3..99f1c0f50e 100644 --- a/derivatives/data_preprocessed/sub-mgh05/anat/sub-mgh05_flip-1_mt-on_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-mgh05/anat/sub-mgh05_flip-1_mt-on_space-other_MTS.json @@ -1,66 +1,76 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.254, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Skyra", - "InstitutionName": "Martinos_Center_Bay_1", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "13th_149_Charlestown_MA_US_02129", - "DeviceSerialNumber": "45407", - "StationName": "BAY1OC", - "BodyPartExamined": "BRAIN", - "PatientPosition": "HFS", - "ProcedureStepDescription": "INVESTIGATORS_Barry", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-MT1", - "ProtocolName": "GRE-MT1", - "ScanningSequence": "GR", - "SequenceVariant": "MTC_SP", - "ScanOptions": "MT", - "SequenceName": "_fl3d1", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "DIS2D"], - "SeriesNumber": 5, - "AcquisitionTime": "12:55:12.022500", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SAR": 0.783483, - "EchoTime": 0.00313, - "RepetitionTime": 0.035, - "FlipAngle": 9, - "PartialFourier": 1, - "BaseResolution": 256, - "ShimSetting": [ - -5037, - 11859, - -11869, - -2241, - -1122, - 4239, - -895, - -111 ], - "TxRefAmp": 426.659, - "PhaseResolution": 1, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC7;NC1,2", - "CoilString": "HC7;NC1_2", - "PulseSequenceDetails": "%SiemensSeq%_gre", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 100, - "PhaseEncodingSteps": 255, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 256, - "PixelBandwidth": 260, - "DwellTime": 7.5e-06, - "ImageOrientationPatientDICOM": [ - 0.998815, - -0.00500858, - -0.0484158, - -7.59417e-08, - 0.994691, - -0.102902 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181125 (JP2:OpenJPEG) (JP-LS:CharLS) Clang8.1.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 123.254, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Skyra", + "InstitutionName": "Martinos_Center_Bay_1", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "13th_149_Charlestown_MA_US_02129", + "DeviceSerialNumber": "45407", + "StationName": "BAY1OC", + "BodyPartExamined": "BRAIN", + "PatientPosition": "HFS", + "ProcedureStepDescription": "INVESTIGATORS_Barry", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-MT1", + "ProtocolName": "GRE-MT1", + "ScanningSequence": "GR", + "SequenceVariant": "MTC_SP", + "ScanOptions": "MT", + "SequenceName": "_fl3d1", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "DIS2D" + ], + "SeriesNumber": 5, + "AcquisitionTime": "12:55:12.022500", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SAR": 0.783483, + "EchoTime": 0.00313, + "RepetitionTime": 0.035, + "FlipAngle": 9, + "PartialFourier": 1, + "BaseResolution": 256, + "ShimSetting": [ + -5037, + 11859, + -11869, + -2241, + -1122, + 4239, + -895, + -111 + ], + "TxRefAmp": 426.659, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC7;NC1,2", + "CoilString": "HC7;NC1_2", + "PulseSequenceDetails": "%SiemensSeq%_gre", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 255, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "PixelBandwidth": 260, + "DwellTime": 7.5e-06, + "ImageOrientationPatientDICOM": [ + 0.998815, + -0.00500858, + -0.0484158, + -7.59417e-08, + 0.994691, + -0.102902 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181125 (JP2:OpenJPEG) (JP-LS:CharLS) Clang8.1.0", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-mgh05/anat/sub-mgh05_flip-2_mt-off_space-other_MTS.json b/derivatives/data_preprocessed/sub-mgh05/anat/sub-mgh05_flip-2_mt-off_space-other_MTS.json index 2025ae769e..c5befec3f6 100644 --- a/derivatives/data_preprocessed/sub-mgh05/anat/sub-mgh05_flip-2_mt-off_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-mgh05/anat/sub-mgh05_flip-2_mt-off_space-other_MTS.json @@ -1,65 +1,75 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.254, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Skyra", - "InstitutionName": "Martinos_Center_Bay_1", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "13th_149_Charlestown_MA_US_02129", - "DeviceSerialNumber": "45407", - "StationName": "BAY1OC", - "BodyPartExamined": "BRAIN", - "PatientPosition": "HFS", - "ProcedureStepDescription": "INVESTIGATORS_Barry", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-T1w", - "ProtocolName": "GRE-T1w", - "ScanningSequence": "GR", - "SequenceVariant": "SP", - "SequenceName": "_fl3d1", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "DIS2D"], - "SeriesNumber": 7, - "AcquisitionTime": "12:59:38.037500", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SAR": 0.0507986, - "EchoTime": 0.00313, - "RepetitionTime": 0.015, - "FlipAngle": 15, - "PartialFourier": 1, - "BaseResolution": 256, - "ShimSetting": [ - -5037, - 11859, - -11869, - -2241, - -1122, - 4239, - -895, - -111 ], - "TxRefAmp": 426.659, - "PhaseResolution": 1, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC7;NC1,2", - "CoilString": "HC7;NC1_2", - "PulseSequenceDetails": "%SiemensSeq%_gre", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 100, - "PhaseEncodingSteps": 255, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 256, - "PixelBandwidth": 260, - "DwellTime": 7.5e-06, - "ImageOrientationPatientDICOM": [ - 0.998815, - -0.00500858, - -0.0484158, - -7.59417e-08, - 0.994691, - -0.102902 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181125 (JP2:OpenJPEG) (JP-LS:CharLS) Clang8.1.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 123.254, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Skyra", + "InstitutionName": "Martinos_Center_Bay_1", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "13th_149_Charlestown_MA_US_02129", + "DeviceSerialNumber": "45407", + "StationName": "BAY1OC", + "BodyPartExamined": "BRAIN", + "PatientPosition": "HFS", + "ProcedureStepDescription": "INVESTIGATORS_Barry", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-T1w", + "ProtocolName": "GRE-T1w", + "ScanningSequence": "GR", + "SequenceVariant": "SP", + "SequenceName": "_fl3d1", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "DIS2D" + ], + "SeriesNumber": 7, + "AcquisitionTime": "12:59:38.037500", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SAR": 0.0507986, + "EchoTime": 0.00313, + "RepetitionTime": 0.015, + "FlipAngle": 15, + "PartialFourier": 1, + "BaseResolution": 256, + "ShimSetting": [ + -5037, + 11859, + -11869, + -2241, + -1122, + 4239, + -895, + -111 + ], + "TxRefAmp": 426.659, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC7;NC1,2", + "CoilString": "HC7;NC1_2", + "PulseSequenceDetails": "%SiemensSeq%_gre", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 255, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "PixelBandwidth": 260, + "DwellTime": 7.5e-06, + "ImageOrientationPatientDICOM": [ + 0.998815, + -0.00500858, + -0.0484158, + -7.59417e-08, + 0.994691, + -0.102902 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181125 (JP2:OpenJPEG) (JP-LS:CharLS) Clang8.1.0", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-mgh05/anat/sub-mgh05_space-other_T1w.json b/derivatives/data_preprocessed/sub-mgh05/anat/sub-mgh05_space-other_T1w.json index 2af274507b..6dc525b90d 100644 --- a/derivatives/data_preprocessed/sub-mgh05/anat/sub-mgh05_space-other_T1w.json +++ b/derivatives/data_preprocessed/sub-mgh05/anat/sub-mgh05_space-other_T1w.json @@ -1,67 +1,80 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.254, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Skyra", - "InstitutionName": "Martinos_Center_Bay_1", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "13th_149_Charlestown_MA_US_02129", - "DeviceSerialNumber": "45407", - "StationName": "BAY1OC", - "BodyPartExamined": "BRAIN", - "PatientPosition": "HFS", - "ProcedureStepDescription": "INVESTIGATORS_Barry", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "T1w", - "ProtocolName": "T1w", - "ScanningSequence": "GR_IR", - "SequenceVariant": "SK_SP_MP", - "ScanOptions": "IR", - "SequenceName": "_tfl3d1_16", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS3D", "DIS2D"], - "SeriesNumber": 2, - "AcquisitionTime": "12:37:36.095000", - "AcquisitionNumber": 1, - "SliceThickness": 1, - "SAR": 0.0709889, - "EchoTime": 0.00372, - "RepetitionTime": 2, - "InversionTime": 1, - "FlipAngle": 9, - "PartialFourier": 1, - "BaseResolution": 320, - "ShimSetting": [ - -5032, - 11836, - -12111, - 59, - -651, - 142, - -25, - 75 ], - "TxRefAmp": 373.561, - "PhaseResolution": 1, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC1-7;NC1,2", - "CoilString": "HC1-7;NC1_2", - "PulseSequenceDetails": "%SiemensSeq%_tfl", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 81.25, - "PhaseEncodingSteps": 259, - "AcquisitionMatrixPE": 260, - "ReconMatrixPE": 320, - "PixelBandwidth": 150, - "DwellTime": 1.04e-05, - "ImageOrientationPatientDICOM": [ - 0, - 1, - 0, - 0.0157074, - 0, - -0.999877 ], - "InPlanePhaseEncodingDirectionDICOM": "ROW", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181125 (JP2:OpenJPEG) (JP-LS:CharLS) Clang8.1.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 123.254, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Skyra", + "InstitutionName": "Martinos_Center_Bay_1", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "13th_149_Charlestown_MA_US_02129", + "DeviceSerialNumber": "45407", + "StationName": "BAY1OC", + "BodyPartExamined": "BRAIN", + "PatientPosition": "HFS", + "ProcedureStepDescription": "INVESTIGATORS_Barry", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "T1w", + "ProtocolName": "T1w", + "ScanningSequence": "GR_IR", + "SequenceVariant": "SK_SP_MP", + "ScanOptions": "IR", + "SequenceName": "_tfl3d1_16", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS3D", + "DIS2D" + ], + "SeriesNumber": 2, + "AcquisitionTime": "12:37:36.095000", + "AcquisitionNumber": 1, + "SliceThickness": 1, + "SAR": 0.0709889, + "EchoTime": 0.00372, + "RepetitionTime": 2, + "InversionTime": 1, + "FlipAngle": 9, + "PartialFourier": 1, + "BaseResolution": 320, + "ShimSetting": [ + -5032, + 11836, + -12111, + 59, + -651, + 142, + -25, + 75 + ], + "TxRefAmp": 373.561, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC1-7;NC1,2", + "CoilString": "HC1-7;NC1_2", + "PulseSequenceDetails": "%SiemensSeq%_tfl", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 81.25, + "PhaseEncodingSteps": 259, + "AcquisitionMatrixPE": 260, + "ReconMatrixPE": 320, + "PixelBandwidth": 150, + "DwellTime": 1.04e-05, + "ImageOrientationPatientDICOM": [ + 0, + 1, + 0, + 0.0157074, + 0, + -0.999877 + ], + "InPlanePhaseEncodingDirectionDICOM": "ROW", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181125 (JP2:OpenJPEG) (JP-LS:CharLS) Clang8.1.0", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-mgh05/anat/sub-mgh05_space-other_T2star.json b/derivatives/data_preprocessed/sub-mgh05/anat/sub-mgh05_space-other_T2star.json index ba11cd468b..76d1e4a6df 100644 --- a/derivatives/data_preprocessed/sub-mgh05/anat/sub-mgh05_space-other_T2star.json +++ b/derivatives/data_preprocessed/sub-mgh05/anat/sub-mgh05_space-other_T2star.json @@ -75,5 +75,9 @@ "InPlanePhaseEncodingDirectionDICOM": "COL", "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20181125 (JP2:OpenJPEG) (JP-LS:CharLS) Clang8.1.0", - "AcquisitionDuration": 285.0 + "AcquisitionDuration": 285.0, + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-mgh05/anat/sub-mgh05_space-other_T2w.json b/derivatives/data_preprocessed/sub-mgh05/anat/sub-mgh05_space-other_T2w.json index 3f3be8c02e..3d8d6615e0 100644 --- a/derivatives/data_preprocessed/sub-mgh05/anat/sub-mgh05_space-other_T2w.json +++ b/derivatives/data_preprocessed/sub-mgh05/anat/sub-mgh05_space-other_T2w.json @@ -1,68 +1,81 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.254, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Skyra", - "InstitutionName": "Martinos_Center_Bay_1", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "13th_149_Charlestown_MA_US_02129", - "DeviceSerialNumber": "45407", - "StationName": "BAY1OC", - "BodyPartExamined": "BRAIN", - "PatientPosition": "HFS", - "ProcedureStepDescription": "INVESTIGATORS_Barry", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "T2w", - "ProtocolName": "T2w", - "ScanningSequence": "SE", - "SequenceVariant": "SK_SP_OSP", - "ScanOptions": "PFP", - "SequenceName": "_spcR_100", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS3D", "DIS2D"], - "SeriesNumber": 3, - "AcquisitionTime": "12:43:30.132500", - "AcquisitionNumber": 1, - "SliceThickness": 0.8, - "SAR": 0.792151, - "EchoTime": 0.12, - "RepetitionTime": 1.5, - "FlipAngle": 120, - "PartialFourier": 1, - "BaseResolution": 320, - "ShimSetting": [ - -5032, - 11836, - -12111, - 59, - -651, - 142, - -25, - 75 ], - "TxRefAmp": 426.659, - "PhaseResolution": 1, - "PhaseOversampling": 0.8, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC5-7;NC1,2", - "CoilString": "HC5-7;NC1_2", - "PulseSequenceDetails": "%SiemensSeq%_tse_vfl", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 100, - "EchoTrainLength": 76, - "PhaseEncodingSteps": 422, - "AcquisitionMatrixPE": 320, - "ReconMatrixPE": 320, - "PixelBandwidth": 625, - "DwellTime": 2.5e-06, - "ImageOrientationPatientDICOM": [ - 1.11e-13, - 1, - 4.895e-12, - -0.0226874, - 4.897e-12, - -0.999743 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181125 (JP2:OpenJPEG) (JP-LS:CharLS) Clang8.1.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 123.254, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Skyra", + "InstitutionName": "Martinos_Center_Bay_1", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "13th_149_Charlestown_MA_US_02129", + "DeviceSerialNumber": "45407", + "StationName": "BAY1OC", + "BodyPartExamined": "BRAIN", + "PatientPosition": "HFS", + "ProcedureStepDescription": "INVESTIGATORS_Barry", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "T2w", + "ProtocolName": "T2w", + "ScanningSequence": "SE", + "SequenceVariant": "SK_SP_OSP", + "ScanOptions": "PFP", + "SequenceName": "_spcR_100", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS3D", + "DIS2D" + ], + "SeriesNumber": 3, + "AcquisitionTime": "12:43:30.132500", + "AcquisitionNumber": 1, + "SliceThickness": 0.8, + "SAR": 0.792151, + "EchoTime": 0.12, + "RepetitionTime": 1.5, + "FlipAngle": 120, + "PartialFourier": 1, + "BaseResolution": 320, + "ShimSetting": [ + -5032, + 11836, + -12111, + 59, + -651, + 142, + -25, + 75 + ], + "TxRefAmp": 426.659, + "PhaseResolution": 1, + "PhaseOversampling": 0.8, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC5-7;NC1,2", + "CoilString": "HC5-7;NC1_2", + "PulseSequenceDetails": "%SiemensSeq%_tse_vfl", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "EchoTrainLength": 76, + "PhaseEncodingSteps": 422, + "AcquisitionMatrixPE": 320, + "ReconMatrixPE": 320, + "PixelBandwidth": 625, + "DwellTime": 2.5e-06, + "ImageOrientationPatientDICOM": [ + 1.11e-13, + 1, + 4.895e-12, + -0.0226874, + 4.897e-12, + -0.999743 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181125 (JP2:OpenJPEG) (JP-LS:CharLS) Clang8.1.0", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-mgh06/anat/sub-mgh06_flip-1_mt-on_space-other_MTS.json b/derivatives/data_preprocessed/sub-mgh06/anat/sub-mgh06_flip-1_mt-on_space-other_MTS.json index 348b95e763..1ed5aa1214 100644 --- a/derivatives/data_preprocessed/sub-mgh06/anat/sub-mgh06_flip-1_mt-on_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-mgh06/anat/sub-mgh06_flip-1_mt-on_space-other_MTS.json @@ -1,66 +1,76 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.254, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Skyra", - "InstitutionName": "Martinos_Center_Bay_1", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "13th_149_Charlestown_MA_US_02129", - "DeviceSerialNumber": "45407", - "StationName": "BAY1OC", - "BodyPartExamined": "BRAIN", - "PatientPosition": "HFS", - "ProcedureStepDescription": "INVESTIGATORS_Barry", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-MT1", - "ProtocolName": "GRE-MT1", - "ScanningSequence": "GR", - "SequenceVariant": "MTC_SP", - "ScanOptions": "MT", - "SequenceName": "_fl3d1", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "DIS2D"], - "SeriesNumber": 5, - "AcquisitionTime": "12:04:59.265000", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SAR": 0.721644, - "EchoTime": 0.00313, - "RepetitionTime": 0.035, - "FlipAngle": 9, - "PartialFourier": 1, - "BaseResolution": 256, - "ShimSetting": [ - -5082, - 11963, - -11737, - -1980, - -1522, - 4999, - -1614, - 883 ], - "TxRefAmp": 403.698, - "PhaseResolution": 1, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC7;NC1,2", - "CoilString": "HC7;NC1_2", - "PulseSequenceDetails": "%SiemensSeq%_gre", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 100, - "PhaseEncodingSteps": 255, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 256, - "PixelBandwidth": 260, - "DwellTime": 7.5e-06, - "ImageOrientationPatientDICOM": [ - 0.993171, - 0, - 0.116671, - 0, - 1, - 0 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181125 (JP2:OpenJPEG) (JP-LS:CharLS) Clang8.1.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 123.254, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Skyra", + "InstitutionName": "Martinos_Center_Bay_1", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "13th_149_Charlestown_MA_US_02129", + "DeviceSerialNumber": "45407", + "StationName": "BAY1OC", + "BodyPartExamined": "BRAIN", + "PatientPosition": "HFS", + "ProcedureStepDescription": "INVESTIGATORS_Barry", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-MT1", + "ProtocolName": "GRE-MT1", + "ScanningSequence": "GR", + "SequenceVariant": "MTC_SP", + "ScanOptions": "MT", + "SequenceName": "_fl3d1", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "DIS2D" + ], + "SeriesNumber": 5, + "AcquisitionTime": "12:04:59.265000", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SAR": 0.721644, + "EchoTime": 0.00313, + "RepetitionTime": 0.035, + "FlipAngle": 9, + "PartialFourier": 1, + "BaseResolution": 256, + "ShimSetting": [ + -5082, + 11963, + -11737, + -1980, + -1522, + 4999, + -1614, + 883 + ], + "TxRefAmp": 403.698, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC7;NC1,2", + "CoilString": "HC7;NC1_2", + "PulseSequenceDetails": "%SiemensSeq%_gre", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 255, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "PixelBandwidth": 260, + "DwellTime": 7.5e-06, + "ImageOrientationPatientDICOM": [ + 0.993171, + 0, + 0.116671, + 0, + 1, + 0 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181125 (JP2:OpenJPEG) (JP-LS:CharLS) Clang8.1.0", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-mgh06/anat/sub-mgh06_flip-2_mt-off_space-other_MTS.json b/derivatives/data_preprocessed/sub-mgh06/anat/sub-mgh06_flip-2_mt-off_space-other_MTS.json index 8c307db9bc..02976e2ef4 100644 --- a/derivatives/data_preprocessed/sub-mgh06/anat/sub-mgh06_flip-2_mt-off_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-mgh06/anat/sub-mgh06_flip-2_mt-off_space-other_MTS.json @@ -1,65 +1,75 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.254, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Skyra", - "InstitutionName": "Martinos_Center_Bay_1", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "13th_149_Charlestown_MA_US_02129", - "DeviceSerialNumber": "45407", - "StationName": "BAY1OC", - "BodyPartExamined": "BRAIN", - "PatientPosition": "HFS", - "ProcedureStepDescription": "INVESTIGATORS_Barry", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-T1w", - "ProtocolName": "GRE-T1w", - "ScanningSequence": "GR", - "SequenceVariant": "SP", - "SequenceName": "_fl3d1", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "DIS2D"], - "SeriesNumber": 7, - "AcquisitionTime": "12:09:45.520000", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SAR": 0.0467892, - "EchoTime": 0.00313, - "RepetitionTime": 0.015, - "FlipAngle": 15, - "PartialFourier": 1, - "BaseResolution": 256, - "ShimSetting": [ - -5082, - 11963, - -11737, - -1980, - -1522, - 4999, - -1614, - 883 ], - "TxRefAmp": 403.698, - "PhaseResolution": 1, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC7;NC1,2", - "CoilString": "HC7;NC1_2", - "PulseSequenceDetails": "%SiemensSeq%_gre", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 100, - "PhaseEncodingSteps": 255, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 256, - "PixelBandwidth": 260, - "DwellTime": 7.5e-06, - "ImageOrientationPatientDICOM": [ - 0.993171, - 0, - 0.116671, - 0, - 1, - 0 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181125 (JP2:OpenJPEG) (JP-LS:CharLS) Clang8.1.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 123.254, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Skyra", + "InstitutionName": "Martinos_Center_Bay_1", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "13th_149_Charlestown_MA_US_02129", + "DeviceSerialNumber": "45407", + "StationName": "BAY1OC", + "BodyPartExamined": "BRAIN", + "PatientPosition": "HFS", + "ProcedureStepDescription": "INVESTIGATORS_Barry", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-T1w", + "ProtocolName": "GRE-T1w", + "ScanningSequence": "GR", + "SequenceVariant": "SP", + "SequenceName": "_fl3d1", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "DIS2D" + ], + "SeriesNumber": 7, + "AcquisitionTime": "12:09:45.520000", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SAR": 0.0467892, + "EchoTime": 0.00313, + "RepetitionTime": 0.015, + "FlipAngle": 15, + "PartialFourier": 1, + "BaseResolution": 256, + "ShimSetting": [ + -5082, + 11963, + -11737, + -1980, + -1522, + 4999, + -1614, + 883 + ], + "TxRefAmp": 403.698, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC7;NC1,2", + "CoilString": "HC7;NC1_2", + "PulseSequenceDetails": "%SiemensSeq%_gre", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 255, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "PixelBandwidth": 260, + "DwellTime": 7.5e-06, + "ImageOrientationPatientDICOM": [ + 0.993171, + 0, + 0.116671, + 0, + 1, + 0 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181125 (JP2:OpenJPEG) (JP-LS:CharLS) Clang8.1.0", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-mgh06/anat/sub-mgh06_space-other_T1w.json b/derivatives/data_preprocessed/sub-mgh06/anat/sub-mgh06_space-other_T1w.json index 1d3fa3fc79..78c1ce070c 100644 --- a/derivatives/data_preprocessed/sub-mgh06/anat/sub-mgh06_space-other_T1w.json +++ b/derivatives/data_preprocessed/sub-mgh06/anat/sub-mgh06_space-other_T1w.json @@ -1,67 +1,80 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.254, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Skyra", - "InstitutionName": "Martinos_Center_Bay_1", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "13th_149_Charlestown_MA_US_02129", - "DeviceSerialNumber": "45407", - "StationName": "BAY1OC", - "BodyPartExamined": "BRAIN", - "PatientPosition": "HFS", - "ProcedureStepDescription": "INVESTIGATORS_Barry", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "T1w", - "ProtocolName": "T1w", - "ScanningSequence": "GR_IR", - "SequenceVariant": "SK_SP_MP", - "ScanOptions": "IR", - "SequenceName": "_tfl3d1_16", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS3D", "DIS2D"], - "SeriesNumber": 2, - "AcquisitionTime": "11:46:40.145000", - "AcquisitionNumber": 1, - "SliceThickness": 1, - "SAR": 0.0757624, - "EchoTime": 0.00372, - "RepetitionTime": 2, - "InversionTime": 1, - "FlipAngle": 9, - "PartialFourier": 1, - "BaseResolution": 320, - "ShimSetting": [ - -5032, - 11836, - -12111, - 59, - -651, - 142, - -25, - 75 ], - "TxRefAmp": 377.787, - "PhaseResolution": 1, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC1-7;NC1,2", - "CoilString": "HC1-7;NC1_2", - "PulseSequenceDetails": "%SiemensSeq%_tfl", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 81.25, - "PhaseEncodingSteps": 259, - "AcquisitionMatrixPE": 260, - "ReconMatrixPE": 320, - "PixelBandwidth": 150, - "DwellTime": 1.04e-05, - "ImageOrientationPatientDICOM": [ - 0, - 1, - 0, - 0.120137, - 0, - -0.992757 ], - "InPlanePhaseEncodingDirectionDICOM": "ROW", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181125 (JP2:OpenJPEG) (JP-LS:CharLS) Clang8.1.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 123.254, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Skyra", + "InstitutionName": "Martinos_Center_Bay_1", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "13th_149_Charlestown_MA_US_02129", + "DeviceSerialNumber": "45407", + "StationName": "BAY1OC", + "BodyPartExamined": "BRAIN", + "PatientPosition": "HFS", + "ProcedureStepDescription": "INVESTIGATORS_Barry", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "T1w", + "ProtocolName": "T1w", + "ScanningSequence": "GR_IR", + "SequenceVariant": "SK_SP_MP", + "ScanOptions": "IR", + "SequenceName": "_tfl3d1_16", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS3D", + "DIS2D" + ], + "SeriesNumber": 2, + "AcquisitionTime": "11:46:40.145000", + "AcquisitionNumber": 1, + "SliceThickness": 1, + "SAR": 0.0757624, + "EchoTime": 0.00372, + "RepetitionTime": 2, + "InversionTime": 1, + "FlipAngle": 9, + "PartialFourier": 1, + "BaseResolution": 320, + "ShimSetting": [ + -5032, + 11836, + -12111, + 59, + -651, + 142, + -25, + 75 + ], + "TxRefAmp": 377.787, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC1-7;NC1,2", + "CoilString": "HC1-7;NC1_2", + "PulseSequenceDetails": "%SiemensSeq%_tfl", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 81.25, + "PhaseEncodingSteps": 259, + "AcquisitionMatrixPE": 260, + "ReconMatrixPE": 320, + "PixelBandwidth": 150, + "DwellTime": 1.04e-05, + "ImageOrientationPatientDICOM": [ + 0, + 1, + 0, + 0.120137, + 0, + -0.992757 + ], + "InPlanePhaseEncodingDirectionDICOM": "ROW", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181125 (JP2:OpenJPEG) (JP-LS:CharLS) Clang8.1.0", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-mgh06/anat/sub-mgh06_space-other_T2star.json b/derivatives/data_preprocessed/sub-mgh06/anat/sub-mgh06_space-other_T2star.json index c90e52f9d2..e9f8128629 100644 --- a/derivatives/data_preprocessed/sub-mgh06/anat/sub-mgh06_space-other_T2star.json +++ b/derivatives/data_preprocessed/sub-mgh06/anat/sub-mgh06_space-other_T2star.json @@ -75,5 +75,9 @@ "InPlanePhaseEncodingDirectionDICOM": "COL", "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20181125 (JP2:OpenJPEG) (JP-LS:CharLS) Clang8.1.0", - "AcquisitionDuration": 285.0 + "AcquisitionDuration": 285.0, + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-mgh06/anat/sub-mgh06_space-other_T2w.json b/derivatives/data_preprocessed/sub-mgh06/anat/sub-mgh06_space-other_T2w.json index 137483c549..7393f79e0b 100644 --- a/derivatives/data_preprocessed/sub-mgh06/anat/sub-mgh06_space-other_T2w.json +++ b/derivatives/data_preprocessed/sub-mgh06/anat/sub-mgh06_space-other_T2w.json @@ -1,68 +1,81 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.254, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Skyra", - "InstitutionName": "Martinos_Center_Bay_1", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "13th_149_Charlestown_MA_US_02129", - "DeviceSerialNumber": "45407", - "StationName": "BAY1OC", - "BodyPartExamined": "BRAIN", - "PatientPosition": "HFS", - "ProcedureStepDescription": "INVESTIGATORS_Barry", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "T2w", - "ProtocolName": "T2w", - "ScanningSequence": "SE", - "SequenceVariant": "SK_SP_OSP", - "ScanOptions": "PFP", - "SequenceName": "_spcR_100", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS3D", "DIS2D"], - "SeriesNumber": 3, - "AcquisitionTime": "11:53:40.220000", - "AcquisitionNumber": 1, - "SliceThickness": 0.8, - "SAR": 0.729628, - "EchoTime": 0.12, - "RepetitionTime": 1.5, - "FlipAngle": 120, - "PartialFourier": 1, - "BaseResolution": 320, - "ShimSetting": [ - -5032, - 11836, - -12111, - 59, - -651, - 142, - -25, - 75 ], - "TxRefAmp": 403.698, - "PhaseResolution": 1, - "PhaseOversampling": 0.8, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC5-7;NC1,2", - "CoilString": "HC5-7;NC1_2", - "PulseSequenceDetails": "%SiemensSeq%_tse_vfl", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 100, - "EchoTrainLength": 76, - "PhaseEncodingSteps": 422, - "AcquisitionMatrixPE": 320, - "ReconMatrixPE": 320, - "PixelBandwidth": 625, - "DwellTime": 2.5e-06, - "ImageOrientationPatientDICOM": [ - -5.71e-13, - 1, - 4.863e-12, - 0.116671, - 4.897e-12, - -0.993171 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181125 (JP2:OpenJPEG) (JP-LS:CharLS) Clang8.1.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 123.254, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Skyra", + "InstitutionName": "Martinos_Center_Bay_1", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "13th_149_Charlestown_MA_US_02129", + "DeviceSerialNumber": "45407", + "StationName": "BAY1OC", + "BodyPartExamined": "BRAIN", + "PatientPosition": "HFS", + "ProcedureStepDescription": "INVESTIGATORS_Barry", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "T2w", + "ProtocolName": "T2w", + "ScanningSequence": "SE", + "SequenceVariant": "SK_SP_OSP", + "ScanOptions": "PFP", + "SequenceName": "_spcR_100", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS3D", + "DIS2D" + ], + "SeriesNumber": 3, + "AcquisitionTime": "11:53:40.220000", + "AcquisitionNumber": 1, + "SliceThickness": 0.8, + "SAR": 0.729628, + "EchoTime": 0.12, + "RepetitionTime": 1.5, + "FlipAngle": 120, + "PartialFourier": 1, + "BaseResolution": 320, + "ShimSetting": [ + -5032, + 11836, + -12111, + 59, + -651, + 142, + -25, + 75 + ], + "TxRefAmp": 403.698, + "PhaseResolution": 1, + "PhaseOversampling": 0.8, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC5-7;NC1,2", + "CoilString": "HC5-7;NC1_2", + "PulseSequenceDetails": "%SiemensSeq%_tse_vfl", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "EchoTrainLength": 76, + "PhaseEncodingSteps": 422, + "AcquisitionMatrixPE": 320, + "ReconMatrixPE": 320, + "PixelBandwidth": 625, + "DwellTime": 2.5e-06, + "ImageOrientationPatientDICOM": [ + -5.71e-13, + 1, + 4.863e-12, + 0.116671, + 4.897e-12, + -0.993171 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181125 (JP2:OpenJPEG) (JP-LS:CharLS) Clang8.1.0", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-milan01/anat/sub-milan01_flip-1_mt-on_space-other_MTS.json b/derivatives/data_preprocessed/sub-milan01/anat/sub-milan01_flip-1_mt-on_space-other_MTS.json index 03a2c5d3dc..cb4f3cdc11 100644 --- a/derivatives/data_preprocessed/sub-milan01/anat/sub-milan01_flip-1_mt-on_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-milan01/anat/sub-milan01_flip-1_mt-on_space-other_MTS.json @@ -1,16 +1,24 @@ { - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma", - "ProcedureStepDescription": "STANDARD_ENCEFALO_MIDOLLO", - "ProtocolName": "GRE-MT1", - "SequenceName": "_fl3d1", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "DIS2D"], - "AcquisitionDateTime": "2018-12-18T14:32:54.906250", - "MagneticFieldStrength": 3, - "FlipAngle": 9, - "EchoTime": 0.00313, - "RepetitionTime": 0.041, - "PhaseEncodingDirection": "j-", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20170207" -} + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma", + "ProcedureStepDescription": "STANDARD_ENCEFALO_MIDOLLO", + "ProtocolName": "GRE-MT1", + "SequenceName": "_fl3d1", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "DIS2D" + ], + "AcquisitionDateTime": "2018-12-18T14:32:54.906250", + "MagneticFieldStrength": 3, + "FlipAngle": 9, + "EchoTime": 0.00313, + "RepetitionTime": 0.041, + "PhaseEncodingDirection": "j-", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20170207", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-milan01/anat/sub-milan01_flip-2_mt-off_space-other_MTS.json b/derivatives/data_preprocessed/sub-milan01/anat/sub-milan01_flip-2_mt-off_space-other_MTS.json index 1ab0c34d24..3d82469564 100644 --- a/derivatives/data_preprocessed/sub-milan01/anat/sub-milan01_flip-2_mt-off_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-milan01/anat/sub-milan01_flip-2_mt-off_space-other_MTS.json @@ -1,16 +1,24 @@ { - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma", - "ProcedureStepDescription": "STANDARD_ENCEFALO_MIDOLLO", - "ProtocolName": "GRE-T1w", - "SequenceName": "_fl3d1", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "DIS2D"], - "AcquisitionDateTime": "2018-12-18T14:37:42.968750", - "MagneticFieldStrength": 3, - "FlipAngle": 15, - "EchoTime": 0.00313, - "RepetitionTime": 0.015, - "PhaseEncodingDirection": "j-", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20170207" -} + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma", + "ProcedureStepDescription": "STANDARD_ENCEFALO_MIDOLLO", + "ProtocolName": "GRE-T1w", + "SequenceName": "_fl3d1", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "DIS2D" + ], + "AcquisitionDateTime": "2018-12-18T14:37:42.968750", + "MagneticFieldStrength": 3, + "FlipAngle": 15, + "EchoTime": 0.00313, + "RepetitionTime": 0.015, + "PhaseEncodingDirection": "j-", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20170207", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-milan01/anat/sub-milan01_space-other_T1w.json b/derivatives/data_preprocessed/sub-milan01/anat/sub-milan01_space-other_T1w.json index 4d8b7ec308..7b3aacbec9 100644 --- a/derivatives/data_preprocessed/sub-milan01/anat/sub-milan01_space-other_T1w.json +++ b/derivatives/data_preprocessed/sub-milan01/anat/sub-milan01_space-other_T1w.json @@ -1,16 +1,27 @@ { - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma", - "ProcedureStepDescription": "STANDARD_ENCEFALO_MIDOLLO", - "ProtocolName": "T1w", - "SequenceName": "_tfl3d1_16", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS3D", "DIS2D"], - "AcquisitionDateTime": "2018-12-18T14:15:56.000000", - "MagneticFieldStrength": 3, - "FlipAngle": 9, - "EchoTime": 0.00372, - "RepetitionTime": 2, - "PhaseEncodingDirection": "i-", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20170207" -} + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma", + "ProcedureStepDescription": "STANDARD_ENCEFALO_MIDOLLO", + "ProtocolName": "T1w", + "SequenceName": "_tfl3d1_16", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS3D", + "DIS2D" + ], + "AcquisitionDateTime": "2018-12-18T14:15:56.000000", + "MagneticFieldStrength": 3, + "FlipAngle": 9, + "EchoTime": 0.00372, + "RepetitionTime": 2, + "PhaseEncodingDirection": "i-", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20170207", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-milan01/anat/sub-milan01_space-other_T2star.json b/derivatives/data_preprocessed/sub-milan01/anat/sub-milan01_space-other_T2star.json index 009ffd619e..30d4643ec9 100644 --- a/derivatives/data_preprocessed/sub-milan01/anat/sub-milan01_space-other_T2star.json +++ b/derivatives/data_preprocessed/sub-milan01/anat/sub-milan01_space-other_T2star.json @@ -19,5 +19,9 @@ "PhaseEncodingDirection": "j-", "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20170207", - "AcquisitionDuration": 285.0 + "AcquisitionDuration": 285.0, + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-milan01/anat/sub-milan01_space-other_T2w.json b/derivatives/data_preprocessed/sub-milan01/anat/sub-milan01_space-other_T2w.json index d32b72d6d8..4edf74374f 100644 --- a/derivatives/data_preprocessed/sub-milan01/anat/sub-milan01_space-other_T2w.json +++ b/derivatives/data_preprocessed/sub-milan01/anat/sub-milan01_space-other_T2w.json @@ -1,16 +1,27 @@ { - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma", - "ProcedureStepDescription": "STANDARD_ENCEFALO_MIDOLLO", - "ProtocolName": "T2w", - "SequenceName": "_spcR_100", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS3D", "DIS2D"], - "AcquisitionDateTime": "2018-12-18T14:21:46.046875", - "MagneticFieldStrength": 3, - "FlipAngle": 120, - "EchoTime": 0.12, - "RepetitionTime": 1.5, - "PhaseEncodingDirection": "j-", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20170207" -} + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma", + "ProcedureStepDescription": "STANDARD_ENCEFALO_MIDOLLO", + "ProtocolName": "T2w", + "SequenceName": "_spcR_100", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS3D", + "DIS2D" + ], + "AcquisitionDateTime": "2018-12-18T14:21:46.046875", + "MagneticFieldStrength": 3, + "FlipAngle": 120, + "EchoTime": 0.12, + "RepetitionTime": 1.5, + "PhaseEncodingDirection": "j-", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20170207", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-milan02/anat/sub-milan02_flip-1_mt-on_space-other_MTS.json b/derivatives/data_preprocessed/sub-milan02/anat/sub-milan02_flip-1_mt-on_space-other_MTS.json index aabac9f4f8..1a13fece29 100644 --- a/derivatives/data_preprocessed/sub-milan02/anat/sub-milan02_flip-1_mt-on_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-milan02/anat/sub-milan02_flip-1_mt-on_space-other_MTS.json @@ -1,16 +1,24 @@ { - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma", - "ProcedureStepDescription": "spine_Montreal", - "ProtocolName": "GRE-MT1", - "SequenceName": "_fl3d1", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "DIS2D"], - "AcquisitionDateTime": "2018-12-21T15:11:11.750000", - "MagneticFieldStrength": 3, - "FlipAngle": 9, - "EchoTime": 0.00313, - "RepetitionTime": 0.035, - "PhaseEncodingDirection": "j-", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20170207" -} + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma", + "ProcedureStepDescription": "spine_Montreal", + "ProtocolName": "GRE-MT1", + "SequenceName": "_fl3d1", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "DIS2D" + ], + "AcquisitionDateTime": "2018-12-21T15:11:11.750000", + "MagneticFieldStrength": 3, + "FlipAngle": 9, + "EchoTime": 0.00313, + "RepetitionTime": 0.035, + "PhaseEncodingDirection": "j-", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20170207", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-milan02/anat/sub-milan02_flip-2_mt-off_space-other_MTS.json b/derivatives/data_preprocessed/sub-milan02/anat/sub-milan02_flip-2_mt-off_space-other_MTS.json index 1771f95266..15dd1be733 100644 --- a/derivatives/data_preprocessed/sub-milan02/anat/sub-milan02_flip-2_mt-off_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-milan02/anat/sub-milan02_flip-2_mt-off_space-other_MTS.json @@ -1,16 +1,24 @@ { - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma", - "ProcedureStepDescription": "spine_Montreal", - "ProtocolName": "GRE-T1w", - "SequenceName": "_fl3d1", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "DIS2D"], - "AcquisitionDateTime": "2018-12-21T15:15:37.968750", - "MagneticFieldStrength": 3, - "FlipAngle": 15, - "EchoTime": 0.00313, - "RepetitionTime": 0.015, - "PhaseEncodingDirection": "j-", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20170207" -} + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma", + "ProcedureStepDescription": "spine_Montreal", + "ProtocolName": "GRE-T1w", + "SequenceName": "_fl3d1", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "DIS2D" + ], + "AcquisitionDateTime": "2018-12-21T15:15:37.968750", + "MagneticFieldStrength": 3, + "FlipAngle": 15, + "EchoTime": 0.00313, + "RepetitionTime": 0.015, + "PhaseEncodingDirection": "j-", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20170207", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-milan02/anat/sub-milan02_space-other_T1w.json b/derivatives/data_preprocessed/sub-milan02/anat/sub-milan02_space-other_T1w.json index 60af9574c7..c1a4d6ad52 100644 --- a/derivatives/data_preprocessed/sub-milan02/anat/sub-milan02_space-other_T1w.json +++ b/derivatives/data_preprocessed/sub-milan02/anat/sub-milan02_space-other_T1w.json @@ -1,16 +1,27 @@ { - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma", - "ProcedureStepDescription": "spine_Montreal", - "ProtocolName": "T1w", - "SequenceName": "_tfl3d1_16", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS3D", "DIS2D"], - "AcquisitionDateTime": "2018-12-21T14:56:11.062500", - "MagneticFieldStrength": 3, - "FlipAngle": 9, - "EchoTime": 0.00372, - "RepetitionTime": 2, - "PhaseEncodingDirection": "i-", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20170207" -} + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma", + "ProcedureStepDescription": "spine_Montreal", + "ProtocolName": "T1w", + "SequenceName": "_tfl3d1_16", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS3D", + "DIS2D" + ], + "AcquisitionDateTime": "2018-12-21T14:56:11.062500", + "MagneticFieldStrength": 3, + "FlipAngle": 9, + "EchoTime": 0.00372, + "RepetitionTime": 2, + "PhaseEncodingDirection": "i-", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20170207", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-milan02/anat/sub-milan02_space-other_T2star.json b/derivatives/data_preprocessed/sub-milan02/anat/sub-milan02_space-other_T2star.json index 7313620610..f2f7df5074 100644 --- a/derivatives/data_preprocessed/sub-milan02/anat/sub-milan02_space-other_T2star.json +++ b/derivatives/data_preprocessed/sub-milan02/anat/sub-milan02_space-other_T2star.json @@ -19,5 +19,9 @@ "PhaseEncodingDirection": "j-", "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20170207", - "AcquisitionDuration": 285.0 + "AcquisitionDuration": 285.0, + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-milan02/anat/sub-milan02_space-other_T2w.json b/derivatives/data_preprocessed/sub-milan02/anat/sub-milan02_space-other_T2w.json index 1514436c2b..321608767a 100644 --- a/derivatives/data_preprocessed/sub-milan02/anat/sub-milan02_space-other_T2w.json +++ b/derivatives/data_preprocessed/sub-milan02/anat/sub-milan02_space-other_T2w.json @@ -1,16 +1,27 @@ { - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma", - "ProcedureStepDescription": "spine_Montreal", - "ProtocolName": "T2w", - "SequenceName": "_spcR_100", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS3D", "DIS2D"], - "AcquisitionDateTime": "2018-12-21T15:01:18.046875", - "MagneticFieldStrength": 3, - "FlipAngle": 120, - "EchoTime": 0.12, - "RepetitionTime": 1.5, - "PhaseEncodingDirection": "j-", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20170207" -} + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma", + "ProcedureStepDescription": "spine_Montreal", + "ProtocolName": "T2w", + "SequenceName": "_spcR_100", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS3D", + "DIS2D" + ], + "AcquisitionDateTime": "2018-12-21T15:01:18.046875", + "MagneticFieldStrength": 3, + "FlipAngle": 120, + "EchoTime": 0.12, + "RepetitionTime": 1.5, + "PhaseEncodingDirection": "j-", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20170207", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-milan03/anat/sub-milan03_flip-1_mt-on_space-other_MTS.json b/derivatives/data_preprocessed/sub-milan03/anat/sub-milan03_flip-1_mt-on_space-other_MTS.json index bba2762b93..8bba6f151c 100644 --- a/derivatives/data_preprocessed/sub-milan03/anat/sub-milan03_flip-1_mt-on_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-milan03/anat/sub-milan03_flip-1_mt-on_space-other_MTS.json @@ -1,16 +1,24 @@ { - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma", - "ProcedureStepDescription": "spine_generic", - "ProtocolName": "GRE-MT1", - "SequenceName": "_fl3d1", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "DIS2D"], - "AcquisitionDateTime": "2018-12-20T11:23:43.382812", - "MagneticFieldStrength": 3, - "FlipAngle": 9, - "EchoTime": 0.00313, - "RepetitionTime": 0.035, - "PhaseEncodingDirection": "j-", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20170207" -} + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma", + "ProcedureStepDescription": "spine_generic", + "ProtocolName": "GRE-MT1", + "SequenceName": "_fl3d1", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "DIS2D" + ], + "AcquisitionDateTime": "2018-12-20T11:23:43.382812", + "MagneticFieldStrength": 3, + "FlipAngle": 9, + "EchoTime": 0.00313, + "RepetitionTime": 0.035, + "PhaseEncodingDirection": "j-", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20170207", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-milan03/anat/sub-milan03_flip-2_mt-off_space-other_MTS.json b/derivatives/data_preprocessed/sub-milan03/anat/sub-milan03_flip-2_mt-off_space-other_MTS.json index fa85acf839..a76cd8ed4c 100644 --- a/derivatives/data_preprocessed/sub-milan03/anat/sub-milan03_flip-2_mt-off_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-milan03/anat/sub-milan03_flip-2_mt-off_space-other_MTS.json @@ -1,16 +1,24 @@ { - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma", - "ProcedureStepDescription": "spine_generic", - "ProtocolName": "GRE-T1w", - "SequenceName": "_fl3d1", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "DIS2D"], - "AcquisitionDateTime": "2018-12-20T11:28:15.257812", - "MagneticFieldStrength": 3, - "FlipAngle": 15, - "EchoTime": 0.00313, - "RepetitionTime": 0.015, - "PhaseEncodingDirection": "j-", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20170207" -} + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma", + "ProcedureStepDescription": "spine_generic", + "ProtocolName": "GRE-T1w", + "SequenceName": "_fl3d1", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "DIS2D" + ], + "AcquisitionDateTime": "2018-12-20T11:28:15.257812", + "MagneticFieldStrength": 3, + "FlipAngle": 15, + "EchoTime": 0.00313, + "RepetitionTime": 0.015, + "PhaseEncodingDirection": "j-", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20170207", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-milan03/anat/sub-milan03_space-other_T1w.json b/derivatives/data_preprocessed/sub-milan03/anat/sub-milan03_space-other_T1w.json index 0a5984e11a..548d6abab1 100644 --- a/derivatives/data_preprocessed/sub-milan03/anat/sub-milan03_space-other_T1w.json +++ b/derivatives/data_preprocessed/sub-milan03/anat/sub-milan03_space-other_T1w.json @@ -1,16 +1,27 @@ { - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma", - "ProcedureStepDescription": "spine_generic", - "ProtocolName": "T1w", - "SequenceName": "_tfl3d1_16", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS3D", "DIS2D"], - "AcquisitionDateTime": "2018-12-20T11:07:2.031250", - "MagneticFieldStrength": 3, - "FlipAngle": 9, - "EchoTime": 0.00372, - "RepetitionTime": 2, - "PhaseEncodingDirection": "i-", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20170207" -} + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma", + "ProcedureStepDescription": "spine_generic", + "ProtocolName": "T1w", + "SequenceName": "_tfl3d1_16", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS3D", + "DIS2D" + ], + "AcquisitionDateTime": "2018-12-20T11:07:2.031250", + "MagneticFieldStrength": 3, + "FlipAngle": 9, + "EchoTime": 0.00372, + "RepetitionTime": 2, + "PhaseEncodingDirection": "i-", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20170207", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-milan03/anat/sub-milan03_space-other_T2star.json b/derivatives/data_preprocessed/sub-milan03/anat/sub-milan03_space-other_T2star.json index 3829d662e3..992552bc77 100644 --- a/derivatives/data_preprocessed/sub-milan03/anat/sub-milan03_space-other_T2star.json +++ b/derivatives/data_preprocessed/sub-milan03/anat/sub-milan03_space-other_T2star.json @@ -19,5 +19,9 @@ "PhaseEncodingDirection": "j-", "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20170207", - "AcquisitionDuration": 285.0 + "AcquisitionDuration": 285.0, + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-milan03/anat/sub-milan03_space-other_T2w.json b/derivatives/data_preprocessed/sub-milan03/anat/sub-milan03_space-other_T2w.json index 5f63c5871a..838a165bc1 100644 --- a/derivatives/data_preprocessed/sub-milan03/anat/sub-milan03_space-other_T2w.json +++ b/derivatives/data_preprocessed/sub-milan03/anat/sub-milan03_space-other_T2w.json @@ -1,16 +1,27 @@ { - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma", - "ProcedureStepDescription": "spine_generic", - "ProtocolName": "T2w", - "SequenceName": "_spcR_100", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS3D", "DIS2D"], - "AcquisitionDateTime": "2018-12-20T11:12:9.031250", - "MagneticFieldStrength": 3, - "FlipAngle": 120, - "EchoTime": 0.12, - "RepetitionTime": 1.5, - "PhaseEncodingDirection": "j-", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20170207" -} + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma", + "ProcedureStepDescription": "spine_generic", + "ProtocolName": "T2w", + "SequenceName": "_spcR_100", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS3D", + "DIS2D" + ], + "AcquisitionDateTime": "2018-12-20T11:12:9.031250", + "MagneticFieldStrength": 3, + "FlipAngle": 120, + "EchoTime": 0.12, + "RepetitionTime": 1.5, + "PhaseEncodingDirection": "j-", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20170207", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-milan04/anat/sub-milan04_flip-1_mt-on_space-other_MTS.json b/derivatives/data_preprocessed/sub-milan04/anat/sub-milan04_flip-1_mt-on_space-other_MTS.json index b2c2df026f..af1ada0802 100644 --- a/derivatives/data_preprocessed/sub-milan04/anat/sub-milan04_flip-1_mt-on_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-milan04/anat/sub-milan04_flip-1_mt-on_space-other_MTS.json @@ -1,16 +1,24 @@ { - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma", - "ProcedureStepDescription": "spine_Montreal", - "ProtocolName": "GRE-MT1", - "SequenceName": "_fl3d1", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "DIS2D"], - "AcquisitionDateTime": "2018-12-20T13:10:33.023438", - "MagneticFieldStrength": 3, - "FlipAngle": 9, - "EchoTime": 0.00313, - "RepetitionTime": 0.035, - "PhaseEncodingDirection": "j-", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20170207" -} + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma", + "ProcedureStepDescription": "spine_Montreal", + "ProtocolName": "GRE-MT1", + "SequenceName": "_fl3d1", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "DIS2D" + ], + "AcquisitionDateTime": "2018-12-20T13:10:33.023438", + "MagneticFieldStrength": 3, + "FlipAngle": 9, + "EchoTime": 0.00313, + "RepetitionTime": 0.035, + "PhaseEncodingDirection": "j-", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20170207", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-milan04/anat/sub-milan04_flip-2_mt-off_space-other_MTS.json b/derivatives/data_preprocessed/sub-milan04/anat/sub-milan04_flip-2_mt-off_space-other_MTS.json index 65a0c7f0dc..78179ce4b9 100644 --- a/derivatives/data_preprocessed/sub-milan04/anat/sub-milan04_flip-2_mt-off_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-milan04/anat/sub-milan04_flip-2_mt-off_space-other_MTS.json @@ -1,16 +1,24 @@ { - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma", - "ProcedureStepDescription": "spine_Montreal", - "ProtocolName": "GRE-T1w", - "SequenceName": "_fl3d1", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "DIS2D"], - "AcquisitionDateTime": "2018-12-20T13:14:58.984375", - "MagneticFieldStrength": 3, - "FlipAngle": 15, - "EchoTime": 0.00313, - "RepetitionTime": 0.015, - "PhaseEncodingDirection": "j-", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20170207" -} + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma", + "ProcedureStepDescription": "spine_Montreal", + "ProtocolName": "GRE-T1w", + "SequenceName": "_fl3d1", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "DIS2D" + ], + "AcquisitionDateTime": "2018-12-20T13:14:58.984375", + "MagneticFieldStrength": 3, + "FlipAngle": 15, + "EchoTime": 0.00313, + "RepetitionTime": 0.015, + "PhaseEncodingDirection": "j-", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20170207", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-milan04/anat/sub-milan04_space-other_T1w.json b/derivatives/data_preprocessed/sub-milan04/anat/sub-milan04_space-other_T1w.json index b7930d78f4..4a87ca5ce4 100644 --- a/derivatives/data_preprocessed/sub-milan04/anat/sub-milan04_space-other_T1w.json +++ b/derivatives/data_preprocessed/sub-milan04/anat/sub-milan04_space-other_T1w.json @@ -1,16 +1,27 @@ { - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma", - "ProcedureStepDescription": "spine_Montreal", - "ProtocolName": "T1w", - "SequenceName": "_tfl3d1_16", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS3D", "DIS2D"], - "AcquisitionDateTime": "2018-12-20T12:53:36.085938", - "MagneticFieldStrength": 3, - "FlipAngle": 9, - "EchoTime": 0.00372, - "RepetitionTime": 2, - "PhaseEncodingDirection": "i-", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20170207" -} + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma", + "ProcedureStepDescription": "spine_Montreal", + "ProtocolName": "T1w", + "SequenceName": "_tfl3d1_16", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS3D", + "DIS2D" + ], + "AcquisitionDateTime": "2018-12-20T12:53:36.085938", + "MagneticFieldStrength": 3, + "FlipAngle": 9, + "EchoTime": 0.00372, + "RepetitionTime": 2, + "PhaseEncodingDirection": "i-", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20170207", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-milan04/anat/sub-milan04_space-other_T2star.json b/derivatives/data_preprocessed/sub-milan04/anat/sub-milan04_space-other_T2star.json index 16e939673c..7e816f5369 100644 --- a/derivatives/data_preprocessed/sub-milan04/anat/sub-milan04_space-other_T2star.json +++ b/derivatives/data_preprocessed/sub-milan04/anat/sub-milan04_space-other_T2star.json @@ -19,5 +19,9 @@ "PhaseEncodingDirection": "j-", "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20170207", - "AcquisitionDuration": 285.0 + "AcquisitionDuration": 285.0, + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-milan04/anat/sub-milan04_space-other_T2w.json b/derivatives/data_preprocessed/sub-milan04/anat/sub-milan04_space-other_T2w.json index bd714add6c..77e8afd61d 100644 --- a/derivatives/data_preprocessed/sub-milan04/anat/sub-milan04_space-other_T2w.json +++ b/derivatives/data_preprocessed/sub-milan04/anat/sub-milan04_space-other_T2w.json @@ -1,16 +1,27 @@ { - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma", - "ProcedureStepDescription": "spine_Montreal", - "ProtocolName": "T2w", - "SequenceName": "_spcR_100", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS3D", "DIS2D"], - "AcquisitionDateTime": "2018-12-20T12:58:38.070312", - "MagneticFieldStrength": 3, - "FlipAngle": 120, - "EchoTime": 0.12, - "RepetitionTime": 1.5, - "PhaseEncodingDirection": "j-", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20170207" -} + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma", + "ProcedureStepDescription": "spine_Montreal", + "ProtocolName": "T2w", + "SequenceName": "_spcR_100", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS3D", + "DIS2D" + ], + "AcquisitionDateTime": "2018-12-20T12:58:38.070312", + "MagneticFieldStrength": 3, + "FlipAngle": 120, + "EchoTime": 0.12, + "RepetitionTime": 1.5, + "PhaseEncodingDirection": "j-", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20170207", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-milan05/anat/sub-milan05_flip-1_mt-on_space-other_MTS.json b/derivatives/data_preprocessed/sub-milan05/anat/sub-milan05_flip-1_mt-on_space-other_MTS.json index b3a169bf73..352c7c0510 100644 --- a/derivatives/data_preprocessed/sub-milan05/anat/sub-milan05_flip-1_mt-on_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-milan05/anat/sub-milan05_flip-1_mt-on_space-other_MTS.json @@ -1,16 +1,24 @@ { - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma", - "ProcedureStepDescription": "spine_Montreal", - "ProtocolName": "GRE-MT1", - "SequenceName": "_fl3d1", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "DIS2D"], - "AcquisitionDateTime": "2019-01-09T10:26:21.007812", - "MagneticFieldStrength": 3, - "FlipAngle": 9, - "EchoTime": 0.00313, - "RepetitionTime": 0.035, - "PhaseEncodingDirection": "j-", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20170207" -} + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma", + "ProcedureStepDescription": "spine_Montreal", + "ProtocolName": "GRE-MT1", + "SequenceName": "_fl3d1", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "DIS2D" + ], + "AcquisitionDateTime": "2019-01-09T10:26:21.007812", + "MagneticFieldStrength": 3, + "FlipAngle": 9, + "EchoTime": 0.00313, + "RepetitionTime": 0.035, + "PhaseEncodingDirection": "j-", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20170207", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-milan05/anat/sub-milan05_flip-2_mt-off_space-other_MTS.json b/derivatives/data_preprocessed/sub-milan05/anat/sub-milan05_flip-2_mt-off_space-other_MTS.json index 722350b0c6..21402f5091 100644 --- a/derivatives/data_preprocessed/sub-milan05/anat/sub-milan05_flip-2_mt-off_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-milan05/anat/sub-milan05_flip-2_mt-off_space-other_MTS.json @@ -1,16 +1,24 @@ { - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma", - "ProcedureStepDescription": "spine_Montreal", - "ProtocolName": "GRE-T1w", - "SequenceName": "_fl3d1", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "DIS2D"], - "AcquisitionDateTime": "2019-01-09T10:32:50.960938", - "MagneticFieldStrength": 3, - "FlipAngle": 15, - "EchoTime": 0.00313, - "RepetitionTime": 0.015, - "PhaseEncodingDirection": "j-", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20170207" -} + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma", + "ProcedureStepDescription": "spine_Montreal", + "ProtocolName": "GRE-T1w", + "SequenceName": "_fl3d1", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "DIS2D" + ], + "AcquisitionDateTime": "2019-01-09T10:32:50.960938", + "MagneticFieldStrength": 3, + "FlipAngle": 15, + "EchoTime": 0.00313, + "RepetitionTime": 0.015, + "PhaseEncodingDirection": "j-", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20170207", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-milan05/anat/sub-milan05_space-other_T1w.json b/derivatives/data_preprocessed/sub-milan05/anat/sub-milan05_space-other_T1w.json index 5f9032ee32..d8add5c6e4 100644 --- a/derivatives/data_preprocessed/sub-milan05/anat/sub-milan05_space-other_T1w.json +++ b/derivatives/data_preprocessed/sub-milan05/anat/sub-milan05_space-other_T1w.json @@ -1,16 +1,27 @@ { - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma", - "ProcedureStepDescription": "spine_Montreal", - "ProtocolName": "T1w", - "SequenceName": "_tfl3d1_16", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS3D", "DIS2D"], - "AcquisitionDateTime": "2019-01-09T10:14:24.671875", - "MagneticFieldStrength": 3, - "FlipAngle": 9, - "EchoTime": 0.00372, - "RepetitionTime": 2, - "PhaseEncodingDirection": "i-", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20170207" -} + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma", + "ProcedureStepDescription": "spine_Montreal", + "ProtocolName": "T1w", + "SequenceName": "_tfl3d1_16", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS3D", + "DIS2D" + ], + "AcquisitionDateTime": "2019-01-09T10:14:24.671875", + "MagneticFieldStrength": 3, + "FlipAngle": 9, + "EchoTime": 0.00372, + "RepetitionTime": 2, + "PhaseEncodingDirection": "i-", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20170207", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-milan05/anat/sub-milan05_space-other_T2star.json b/derivatives/data_preprocessed/sub-milan05/anat/sub-milan05_space-other_T2star.json index c881266775..7895af9539 100644 --- a/derivatives/data_preprocessed/sub-milan05/anat/sub-milan05_space-other_T2star.json +++ b/derivatives/data_preprocessed/sub-milan05/anat/sub-milan05_space-other_T2star.json @@ -19,5 +19,9 @@ "PhaseEncodingDirection": "j-", "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20170207", - "AcquisitionDuration": 285.0 + "AcquisitionDuration": 285.0, + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-milan05/anat/sub-milan05_space-other_T2w.json b/derivatives/data_preprocessed/sub-milan05/anat/sub-milan05_space-other_T2w.json index 9cdcb3cc3a..13c3cc0f98 100644 --- a/derivatives/data_preprocessed/sub-milan05/anat/sub-milan05_space-other_T2w.json +++ b/derivatives/data_preprocessed/sub-milan05/anat/sub-milan05_space-other_T2w.json @@ -1,16 +1,27 @@ { - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma", - "ProcedureStepDescription": "spine_Montreal", - "ProtocolName": "T2w", - "SequenceName": "_spcR_100", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS3D", "DIS2D"], - "AcquisitionDateTime": "2019-01-09T10:19:37.687500", - "MagneticFieldStrength": 3, - "FlipAngle": 120, - "EchoTime": 0.12, - "RepetitionTime": 1.5, - "PhaseEncodingDirection": "j-", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20170207" -} + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma", + "ProcedureStepDescription": "spine_Montreal", + "ProtocolName": "T2w", + "SequenceName": "_spcR_100", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS3D", + "DIS2D" + ], + "AcquisitionDateTime": "2019-01-09T10:19:37.687500", + "MagneticFieldStrength": 3, + "FlipAngle": 120, + "EchoTime": 0.12, + "RepetitionTime": 1.5, + "PhaseEncodingDirection": "j-", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20170207", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-milan06/anat/sub-milan06_flip-1_mt-on_space-other_MTS.json b/derivatives/data_preprocessed/sub-milan06/anat/sub-milan06_flip-1_mt-on_space-other_MTS.json index 85573e14b6..050a9dd24f 100644 --- a/derivatives/data_preprocessed/sub-milan06/anat/sub-milan06_flip-1_mt-on_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-milan06/anat/sub-milan06_flip-1_mt-on_space-other_MTS.json @@ -1,16 +1,24 @@ { - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma", - "ProcedureStepDescription": "spine_Montreal", - "ProtocolName": "GRE-MT1", - "SequenceName": "_fl3d1", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "DIS2D"], - "AcquisitionDateTime": "2019-01-10T16:43:17.031250", - "MagneticFieldStrength": 3, - "FlipAngle": 9, - "EchoTime": 0.00313, - "RepetitionTime": 0.035, - "PhaseEncodingDirection": "j-", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20170207" -} + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma", + "ProcedureStepDescription": "spine_Montreal", + "ProtocolName": "GRE-MT1", + "SequenceName": "_fl3d1", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "DIS2D" + ], + "AcquisitionDateTime": "2019-01-10T16:43:17.031250", + "MagneticFieldStrength": 3, + "FlipAngle": 9, + "EchoTime": 0.00313, + "RepetitionTime": 0.035, + "PhaseEncodingDirection": "j-", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20170207", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-milan06/anat/sub-milan06_flip-2_mt-off_space-other_MTS.json b/derivatives/data_preprocessed/sub-milan06/anat/sub-milan06_flip-2_mt-off_space-other_MTS.json index dd33b1705b..bbc1cd69ed 100644 --- a/derivatives/data_preprocessed/sub-milan06/anat/sub-milan06_flip-2_mt-off_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-milan06/anat/sub-milan06_flip-2_mt-off_space-other_MTS.json @@ -1,16 +1,24 @@ { - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma", - "ProcedureStepDescription": "spine_Montreal", - "ProtocolName": "GRE-T1w", - "SequenceName": "_fl3d1", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "DIS2D"], - "AcquisitionDateTime": "2019-01-10T16:37:19.968750", - "MagneticFieldStrength": 3, - "FlipAngle": 15, - "EchoTime": 0.00313, - "RepetitionTime": 0.015, - "PhaseEncodingDirection": "j-", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20170207" -} + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma", + "ProcedureStepDescription": "spine_Montreal", + "ProtocolName": "GRE-T1w", + "SequenceName": "_fl3d1", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "DIS2D" + ], + "AcquisitionDateTime": "2019-01-10T16:37:19.968750", + "MagneticFieldStrength": 3, + "FlipAngle": 15, + "EchoTime": 0.00313, + "RepetitionTime": 0.015, + "PhaseEncodingDirection": "j-", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20170207", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-milan06/anat/sub-milan06_space-other_T1w.json b/derivatives/data_preprocessed/sub-milan06/anat/sub-milan06_space-other_T1w.json index d4a879e37c..7c81365ea9 100644 --- a/derivatives/data_preprocessed/sub-milan06/anat/sub-milan06_space-other_T1w.json +++ b/derivatives/data_preprocessed/sub-milan06/anat/sub-milan06_space-other_T1w.json @@ -1,16 +1,27 @@ { - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma", - "ProcedureStepDescription": "spine_Montreal", - "ProtocolName": "T1w", - "SequenceName": "_tfl3d1_16", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS3D", "DIS2D"], - "AcquisitionDateTime": "2019-01-10T16:18:17.046875", - "MagneticFieldStrength": 3, - "FlipAngle": 9, - "EchoTime": 0.00372, - "RepetitionTime": 2, - "PhaseEncodingDirection": "i-", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20170207" -} + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma", + "ProcedureStepDescription": "spine_Montreal", + "ProtocolName": "T1w", + "SequenceName": "_tfl3d1_16", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS3D", + "DIS2D" + ], + "AcquisitionDateTime": "2019-01-10T16:18:17.046875", + "MagneticFieldStrength": 3, + "FlipAngle": 9, + "EchoTime": 0.00372, + "RepetitionTime": 2, + "PhaseEncodingDirection": "i-", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20170207", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-milan06/anat/sub-milan06_space-other_T2star.json b/derivatives/data_preprocessed/sub-milan06/anat/sub-milan06_space-other_T2star.json index b362c93708..b6accd8b39 100644 --- a/derivatives/data_preprocessed/sub-milan06/anat/sub-milan06_space-other_T2star.json +++ b/derivatives/data_preprocessed/sub-milan06/anat/sub-milan06_space-other_T2star.json @@ -19,5 +19,9 @@ "PhaseEncodingDirection": "j-", "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20170207", - "AcquisitionDuration": 285.0 + "AcquisitionDuration": 285.0, + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-milan06/anat/sub-milan06_space-other_T2w.json b/derivatives/data_preprocessed/sub-milan06/anat/sub-milan06_space-other_T2w.json index 49057c2587..448af1ac2f 100644 --- a/derivatives/data_preprocessed/sub-milan06/anat/sub-milan06_space-other_T2w.json +++ b/derivatives/data_preprocessed/sub-milan06/anat/sub-milan06_space-other_T2w.json @@ -1,16 +1,27 @@ { - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma", - "ProcedureStepDescription": "spine_Montreal", - "ProtocolName": "T2w", - "SequenceName": "_spcR_100", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS3D", "DIS2D"], - "AcquisitionDateTime": "2019-01-10T16:24:6.718750", - "MagneticFieldStrength": 3, - "FlipAngle": 120, - "EchoTime": 0.12, - "RepetitionTime": 1.5, - "PhaseEncodingDirection": "j-", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20170207" -} + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma", + "ProcedureStepDescription": "spine_Montreal", + "ProtocolName": "T2w", + "SequenceName": "_spcR_100", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS3D", + "DIS2D" + ], + "AcquisitionDateTime": "2019-01-10T16:24:6.718750", + "MagneticFieldStrength": 3, + "FlipAngle": 120, + "EchoTime": 0.12, + "RepetitionTime": 1.5, + "PhaseEncodingDirection": "j-", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20170207", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-milan07/anat/sub-milan07_flip-1_mt-on_space-other_MTS.json b/derivatives/data_preprocessed/sub-milan07/anat/sub-milan07_flip-1_mt-on_space-other_MTS.json index 8e182996bf..0987ccbbd1 100644 --- a/derivatives/data_preprocessed/sub-milan07/anat/sub-milan07_flip-1_mt-on_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-milan07/anat/sub-milan07_flip-1_mt-on_space-other_MTS.json @@ -1,16 +1,24 @@ { - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma", - "ProcedureStepDescription": "spine_Montreal", - "ProtocolName": "GRE-MT1", - "SequenceName": "_fl3d1", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "DIS2D"], - "AcquisitionDateTime": "2019-01-15T14:35:1.000000", - "MagneticFieldStrength": 3, - "FlipAngle": 9, - "EchoTime": 0.00313, - "RepetitionTime": 0.035, - "PhaseEncodingDirection": "j-", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20170207" -} + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma", + "ProcedureStepDescription": "spine_Montreal", + "ProtocolName": "GRE-MT1", + "SequenceName": "_fl3d1", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "DIS2D" + ], + "AcquisitionDateTime": "2019-01-15T14:35:1.000000", + "MagneticFieldStrength": 3, + "FlipAngle": 9, + "EchoTime": 0.00313, + "RepetitionTime": 0.035, + "PhaseEncodingDirection": "j-", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20170207", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-milan07/anat/sub-milan07_flip-2_mt-off_space-other_MTS.json b/derivatives/data_preprocessed/sub-milan07/anat/sub-milan07_flip-2_mt-off_space-other_MTS.json index 6d679e34c5..11e7b5926e 100644 --- a/derivatives/data_preprocessed/sub-milan07/anat/sub-milan07_flip-2_mt-off_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-milan07/anat/sub-milan07_flip-2_mt-off_space-other_MTS.json @@ -1,16 +1,24 @@ { - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma", - "ProcedureStepDescription": "spine_Montreal", - "ProtocolName": "GRE-T1w", - "SequenceName": "_fl3d1", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "DIS2D"], - "AcquisitionDateTime": "2019-01-15T14:39:25.937500", - "MagneticFieldStrength": 3, - "FlipAngle": 15, - "EchoTime": 0.00313, - "RepetitionTime": 0.015, - "PhaseEncodingDirection": "j-", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20170207" -} + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma", + "ProcedureStepDescription": "spine_Montreal", + "ProtocolName": "GRE-T1w", + "SequenceName": "_fl3d1", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "DIS2D" + ], + "AcquisitionDateTime": "2019-01-15T14:39:25.937500", + "MagneticFieldStrength": 3, + "FlipAngle": 15, + "EchoTime": 0.00313, + "RepetitionTime": 0.015, + "PhaseEncodingDirection": "j-", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20170207", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-milan07/anat/sub-milan07_space-other_T1w.json b/derivatives/data_preprocessed/sub-milan07/anat/sub-milan07_space-other_T1w.json index 5f1228c6fd..5a7f552c5b 100644 --- a/derivatives/data_preprocessed/sub-milan07/anat/sub-milan07_space-other_T1w.json +++ b/derivatives/data_preprocessed/sub-milan07/anat/sub-milan07_space-other_T1w.json @@ -1,16 +1,27 @@ { - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma", - "ProcedureStepDescription": "spine_Montreal", - "ProtocolName": "T1w", - "SequenceName": "_tfl3d1_16", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS3D", "DIS2D"], - "AcquisitionDateTime": "2019-01-15T14:20:42.687500", - "MagneticFieldStrength": 3, - "FlipAngle": 9, - "EchoTime": 0.00372, - "RepetitionTime": 2, - "PhaseEncodingDirection": "i-", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20170207" -} + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma", + "ProcedureStepDescription": "spine_Montreal", + "ProtocolName": "T1w", + "SequenceName": "_tfl3d1_16", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS3D", + "DIS2D" + ], + "AcquisitionDateTime": "2019-01-15T14:20:42.687500", + "MagneticFieldStrength": 3, + "FlipAngle": 9, + "EchoTime": 0.00372, + "RepetitionTime": 2, + "PhaseEncodingDirection": "i-", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20170207", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-milan07/anat/sub-milan07_space-other_T2star.json b/derivatives/data_preprocessed/sub-milan07/anat/sub-milan07_space-other_T2star.json index c3b5e8eefa..8d27b78ab3 100644 --- a/derivatives/data_preprocessed/sub-milan07/anat/sub-milan07_space-other_T2star.json +++ b/derivatives/data_preprocessed/sub-milan07/anat/sub-milan07_space-other_T2star.json @@ -19,5 +19,9 @@ "PhaseEncodingDirection": "j-", "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20170207", - "AcquisitionDuration": 285.0 + "AcquisitionDuration": 285.0, + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-milan07/anat/sub-milan07_space-other_T2w.json b/derivatives/data_preprocessed/sub-milan07/anat/sub-milan07_space-other_T2w.json index 7da1424927..d4fc6acfd2 100644 --- a/derivatives/data_preprocessed/sub-milan07/anat/sub-milan07_space-other_T2w.json +++ b/derivatives/data_preprocessed/sub-milan07/anat/sub-milan07_space-other_T2w.json @@ -1,16 +1,27 @@ { - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma", - "ProcedureStepDescription": "spine_Montreal", - "ProtocolName": "T2w", - "SequenceName": "_spcR_100", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS3D", "DIS2D"], - "AcquisitionDateTime": "2019-01-15T14:45:39.015625", - "MagneticFieldStrength": 3, - "FlipAngle": 120, - "EchoTime": 0.12, - "RepetitionTime": 1.5, - "PhaseEncodingDirection": "j-", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20170207" -} + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma", + "ProcedureStepDescription": "spine_Montreal", + "ProtocolName": "T2w", + "SequenceName": "_spcR_100", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS3D", + "DIS2D" + ], + "AcquisitionDateTime": "2019-01-15T14:45:39.015625", + "MagneticFieldStrength": 3, + "FlipAngle": 120, + "EchoTime": 0.12, + "RepetitionTime": 1.5, + "PhaseEncodingDirection": "j-", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20170207", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-mniPilot1/anat/sub-mniPilot1_flip-1_mt-on_space-other_MTS.json b/derivatives/data_preprocessed/sub-mniPilot1/anat/sub-mniPilot1_flip-1_mt-on_space-other_MTS.json index 170e5368e6..81db769677 100644 --- a/derivatives/data_preprocessed/sub-mniPilot1/anat/sub-mniPilot1_flip-1_mt-on_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-mniPilot1/anat/sub-mniPilot1_flip-1_mt-on_space-other_MTS.json @@ -1,65 +1,75 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma_fit", - "InstitutionName": "Mc_Connell_Brain_Imaging_Centre", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "University_Street_3801_Montreal_District_CA_H3A_2B4", - "DeviceSerialNumber": "167017", - "StationName": "MRC35056", - "BodyPartExamined": "BRAIN", - "PatientPosition": "HFS", - "ProcedureStepDescription": "Functional_Dr._Doyon", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-MT1", - "ProtocolName": "GRE-MT1", - "ScanningSequence": "GR", - "SequenceVariant": "MTC_SP", - "ScanOptions": "MT", - "SequenceName": "_fl3d1", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "DIS2D"], - "SeriesNumber": 8, - "AcquisitionTime": "16:18:38.060000", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SAR": 0.479139, - "EchoTime": 0.00313, - "RepetitionTime": 0.035, - "FlipAngle": 9, - "PartialFourier": 1, - "BaseResolution": 256, - "ShimSetting": [ - 297, - -11856, - -6619, - -1643, - 50, - 2052, - -250, - -156 ], - "TxRefAmp": 256.564, - "PhaseResolution": 1, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC7;NC1,2", - "PulseSequenceDetails": "%SiemensSeq%_gre", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 100, - "PhaseEncodingSteps": 255, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 256, - "ParallelReductionFactorInPlane": 2, - "PixelBandwidth": 260, - "DwellTime": 7.5e-06, - "ImageOrientationPatientDICOM": [ - 1, - 0, - 0, - 0, - 1, - 0 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 GCC5.3.1" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma_fit", + "InstitutionName": "Mc_Connell_Brain_Imaging_Centre", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "University_Street_3801_Montreal_District_CA_H3A_2B4", + "DeviceSerialNumber": "167017", + "StationName": "MRC35056", + "BodyPartExamined": "BRAIN", + "PatientPosition": "HFS", + "ProcedureStepDescription": "Functional_Dr._Doyon", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-MT1", + "ProtocolName": "GRE-MT1", + "ScanningSequence": "GR", + "SequenceVariant": "MTC_SP", + "ScanOptions": "MT", + "SequenceName": "_fl3d1", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "DIS2D" + ], + "SeriesNumber": 8, + "AcquisitionTime": "16:18:38.060000", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SAR": 0.479139, + "EchoTime": 0.00313, + "RepetitionTime": 0.035, + "FlipAngle": 9, + "PartialFourier": 1, + "BaseResolution": 256, + "ShimSetting": [ + 297, + -11856, + -6619, + -1643, + 50, + 2052, + -250, + -156 + ], + "TxRefAmp": 256.564, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC7;NC1,2", + "PulseSequenceDetails": "%SiemensSeq%_gre", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 255, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "ParallelReductionFactorInPlane": 2, + "PixelBandwidth": 260, + "DwellTime": 7.5e-06, + "ImageOrientationPatientDICOM": [ + 1, + 0, + 0, + 0, + 1, + 0 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 GCC5.3.1", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-mniPilot1/anat/sub-mniPilot1_flip-2_mt-off_space-other_MTS.json b/derivatives/data_preprocessed/sub-mniPilot1/anat/sub-mniPilot1_flip-2_mt-off_space-other_MTS.json index c6db153cd4..311a694450 100644 --- a/derivatives/data_preprocessed/sub-mniPilot1/anat/sub-mniPilot1_flip-2_mt-off_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-mniPilot1/anat/sub-mniPilot1_flip-2_mt-off_space-other_MTS.json @@ -1,64 +1,74 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma_fit", - "InstitutionName": "Mc_Connell_Brain_Imaging_Centre", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "University_Street_3801_Montreal_District_CA_H3A_2B4", - "DeviceSerialNumber": "167017", - "StationName": "MRC35056", - "BodyPartExamined": "BRAIN", - "PatientPosition": "HFS", - "ProcedureStepDescription": "Functional_Dr._Doyon", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-T1w", - "ProtocolName": "GRE-T1w", - "ScanningSequence": "GR", - "SequenceVariant": "SP", - "SequenceName": "_fl3d1", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "DIS2D"], - "SeriesNumber": 10, - "AcquisitionTime": "16:23:20.992500", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SAR": 0.0310659, - "EchoTime": 0.00313, - "RepetitionTime": 0.015, - "FlipAngle": 15, - "PartialFourier": 1, - "BaseResolution": 256, - "ShimSetting": [ - 297, - -11856, - -6619, - -1643, - 50, - 2052, - -250, - -156 ], - "TxRefAmp": 256.564, - "PhaseResolution": 1, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC7;NC1,2", - "PulseSequenceDetails": "%SiemensSeq%_gre", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 100, - "PhaseEncodingSteps": 255, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 256, - "ParallelReductionFactorInPlane": 2, - "PixelBandwidth": 260, - "DwellTime": 7.5e-06, - "ImageOrientationPatientDICOM": [ - 1, - 0, - 0, - 0, - 1, - 0 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 GCC5.3.1" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma_fit", + "InstitutionName": "Mc_Connell_Brain_Imaging_Centre", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "University_Street_3801_Montreal_District_CA_H3A_2B4", + "DeviceSerialNumber": "167017", + "StationName": "MRC35056", + "BodyPartExamined": "BRAIN", + "PatientPosition": "HFS", + "ProcedureStepDescription": "Functional_Dr._Doyon", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-T1w", + "ProtocolName": "GRE-T1w", + "ScanningSequence": "GR", + "SequenceVariant": "SP", + "SequenceName": "_fl3d1", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "DIS2D" + ], + "SeriesNumber": 10, + "AcquisitionTime": "16:23:20.992500", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SAR": 0.0310659, + "EchoTime": 0.00313, + "RepetitionTime": 0.015, + "FlipAngle": 15, + "PartialFourier": 1, + "BaseResolution": 256, + "ShimSetting": [ + 297, + -11856, + -6619, + -1643, + 50, + 2052, + -250, + -156 + ], + "TxRefAmp": 256.564, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC7;NC1,2", + "PulseSequenceDetails": "%SiemensSeq%_gre", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 255, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "ParallelReductionFactorInPlane": 2, + "PixelBandwidth": 260, + "DwellTime": 7.5e-06, + "ImageOrientationPatientDICOM": [ + 1, + 0, + 0, + 0, + 1, + 0 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 GCC5.3.1", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-mniPilot1/anat/sub-mniPilot1_space-other_T1w.json b/derivatives/data_preprocessed/sub-mniPilot1/anat/sub-mniPilot1_space-other_T1w.json index c473765765..ad652045f5 100644 --- a/derivatives/data_preprocessed/sub-mniPilot1/anat/sub-mniPilot1_space-other_T1w.json +++ b/derivatives/data_preprocessed/sub-mniPilot1/anat/sub-mniPilot1_space-other_T1w.json @@ -1,66 +1,79 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma_fit", - "InstitutionName": "Mc_Connell_Brain_Imaging_Centre", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "University_Street_3801_Montreal_District_CA_H3A_2B4", - "DeviceSerialNumber": "167017", - "StationName": "MRC35056", - "BodyPartExamined": "BRAIN", - "PatientPosition": "HFS", - "ProcedureStepDescription": "Functional_Dr._Doyon", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "T1w", - "ProtocolName": "T1w", - "ScanningSequence": "GR_IR", - "SequenceVariant": "SK_SP_MP", - "ScanOptions": "IR", - "SequenceName": "_tfl3d1_16", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS3D", "DIS2D"], - "SeriesNumber": 3, - "AcquisitionTime": "16:04:9.165000", - "AcquisitionNumber": 1, - "SliceThickness": 1, - "SAR": 0.0573982, - "EchoTime": 0.00372, - "RepetitionTime": 2, - "InversionTime": 1, - "FlipAngle": 9, - "PartialFourier": 1, - "BaseResolution": 320, - "ShimSetting": [ - 326, - -11589, - -6664, - 57, - 16, - 3, - -26, - 6 ], - "TxRefAmp": 246.37, - "PhaseResolution": 1, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC1-7;NC1,2", - "PulseSequenceDetails": "%SiemensSeq%_tfl", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 81.25, - "PhaseEncodingSteps": 259, - "AcquisitionMatrixPE": 260, - "ReconMatrixPE": 320, - "ParallelReductionFactorInPlane": 2, - "PixelBandwidth": 150, - "DwellTime": 1.04e-05, - "ImageOrientationPatientDICOM": [ - 0, - 1, - 0, - 0, - 0, - -1 ], - "InPlanePhaseEncodingDirectionDICOM": "ROW", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 GCC5.3.1" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma_fit", + "InstitutionName": "Mc_Connell_Brain_Imaging_Centre", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "University_Street_3801_Montreal_District_CA_H3A_2B4", + "DeviceSerialNumber": "167017", + "StationName": "MRC35056", + "BodyPartExamined": "BRAIN", + "PatientPosition": "HFS", + "ProcedureStepDescription": "Functional_Dr._Doyon", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "T1w", + "ProtocolName": "T1w", + "ScanningSequence": "GR_IR", + "SequenceVariant": "SK_SP_MP", + "ScanOptions": "IR", + "SequenceName": "_tfl3d1_16", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS3D", + "DIS2D" + ], + "SeriesNumber": 3, + "AcquisitionTime": "16:04:9.165000", + "AcquisitionNumber": 1, + "SliceThickness": 1, + "SAR": 0.0573982, + "EchoTime": 0.00372, + "RepetitionTime": 2, + "InversionTime": 1, + "FlipAngle": 9, + "PartialFourier": 1, + "BaseResolution": 320, + "ShimSetting": [ + 326, + -11589, + -6664, + 57, + 16, + 3, + -26, + 6 + ], + "TxRefAmp": 246.37, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC1-7;NC1,2", + "PulseSequenceDetails": "%SiemensSeq%_tfl", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 81.25, + "PhaseEncodingSteps": 259, + "AcquisitionMatrixPE": 260, + "ReconMatrixPE": 320, + "ParallelReductionFactorInPlane": 2, + "PixelBandwidth": 150, + "DwellTime": 1.04e-05, + "ImageOrientationPatientDICOM": [ + 0, + 1, + 0, + 0, + 0, + -1 + ], + "InPlanePhaseEncodingDirectionDICOM": "ROW", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 GCC5.3.1", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-mniPilot1/anat/sub-mniPilot1_space-other_T2star.json b/derivatives/data_preprocessed/sub-mniPilot1/anat/sub-mniPilot1_space-other_T2star.json index 7228f68f4c..a7b8b9317f 100644 --- a/derivatives/data_preprocessed/sub-mniPilot1/anat/sub-mniPilot1_space-other_T2star.json +++ b/derivatives/data_preprocessed/sub-mniPilot1/anat/sub-mniPilot1_space-other_T2star.json @@ -73,5 +73,9 @@ "InPlanePhaseEncodingDirectionDICOM": "COL", "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20180622 GCC5.3.1", - "AcquisitionDuration": 285.0 + "AcquisitionDuration": 285.0, + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-mniPilot1/anat/sub-mniPilot1_space-other_T2w.json b/derivatives/data_preprocessed/sub-mniPilot1/anat/sub-mniPilot1_space-other_T2w.json index e1e2dd822a..2a7566a85c 100644 --- a/derivatives/data_preprocessed/sub-mniPilot1/anat/sub-mniPilot1_space-other_T2w.json +++ b/derivatives/data_preprocessed/sub-mniPilot1/anat/sub-mniPilot1_space-other_T2w.json @@ -1,67 +1,80 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma_fit", - "InstitutionName": "Mc_Connell_Brain_Imaging_Centre", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "University_Street_3801_Montreal_District_CA_H3A_2B4", - "DeviceSerialNumber": "167017", - "StationName": "MRC35056", - "BodyPartExamined": "BRAIN", - "PatientPosition": "HFS", - "ProcedureStepDescription": "Functional_Dr._Doyon", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "T2w", - "ProtocolName": "T2w", - "ScanningSequence": "SE", - "SequenceVariant": "SK_SP_OSP", - "ScanOptions": "PFP", - "SequenceName": "_spcR_100", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS3D", "DIS2D"], - "SeriesNumber": 6, - "AcquisitionTime": "16:09:33.702500", - "AcquisitionNumber": 1, - "SliceThickness": 0.8, - "SAR": 0.506122, - "EchoTime": 0.12, - "RepetitionTime": 1.5, - "FlipAngle": 120, - "PartialFourier": 1, - "BaseResolution": 320, - "ShimSetting": [ - 326, - -11589, - -6664, - 57, - 16, - 3, - -26, - 6 ], - "TxRefAmp": 261.769, - "PhaseResolution": 1, - "PhaseOversampling": 0.8, - "ReceiveCoilName": "Spine_32", - "ReceiveCoilActiveElements": "HC5-7;NC1,2;SP1", - "PulseSequenceDetails": "%SiemensSeq%_tse_vfl", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 100, - "EchoTrainLength": 76, - "PhaseEncodingSteps": 422, - "AcquisitionMatrixPE": 320, - "ReconMatrixPE": 320, - "ParallelReductionFactorInPlane": 3, - "PixelBandwidth": 625, - "DwellTime": 2.5e-06, - "ImageOrientationPatientDICOM": [ - 0, - 1, - 0, - 0, - 0, - -1 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 GCC5.3.1" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma_fit", + "InstitutionName": "Mc_Connell_Brain_Imaging_Centre", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "University_Street_3801_Montreal_District_CA_H3A_2B4", + "DeviceSerialNumber": "167017", + "StationName": "MRC35056", + "BodyPartExamined": "BRAIN", + "PatientPosition": "HFS", + "ProcedureStepDescription": "Functional_Dr._Doyon", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "T2w", + "ProtocolName": "T2w", + "ScanningSequence": "SE", + "SequenceVariant": "SK_SP_OSP", + "ScanOptions": "PFP", + "SequenceName": "_spcR_100", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS3D", + "DIS2D" + ], + "SeriesNumber": 6, + "AcquisitionTime": "16:09:33.702500", + "AcquisitionNumber": 1, + "SliceThickness": 0.8, + "SAR": 0.506122, + "EchoTime": 0.12, + "RepetitionTime": 1.5, + "FlipAngle": 120, + "PartialFourier": 1, + "BaseResolution": 320, + "ShimSetting": [ + 326, + -11589, + -6664, + 57, + 16, + 3, + -26, + 6 + ], + "TxRefAmp": 261.769, + "PhaseResolution": 1, + "PhaseOversampling": 0.8, + "ReceiveCoilName": "Spine_32", + "ReceiveCoilActiveElements": "HC5-7;NC1,2;SP1", + "PulseSequenceDetails": "%SiemensSeq%_tse_vfl", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "EchoTrainLength": 76, + "PhaseEncodingSteps": 422, + "AcquisitionMatrixPE": 320, + "ReconMatrixPE": 320, + "ParallelReductionFactorInPlane": 3, + "PixelBandwidth": 625, + "DwellTime": 2.5e-06, + "ImageOrientationPatientDICOM": [ + 0, + 1, + 0, + 0, + 0, + -1 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 GCC5.3.1", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-mniS01/anat/sub-mniS01_flip-1_mt-on_space-other_MTS.json b/derivatives/data_preprocessed/sub-mniS01/anat/sub-mniS01_flip-1_mt-on_space-other_MTS.json index 7d0aa97d2a..04ac699d36 100644 --- a/derivatives/data_preprocessed/sub-mniS01/anat/sub-mniS01_flip-1_mt-on_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-mniS01/anat/sub-mniS01_flip-1_mt-on_space-other_MTS.json @@ -1,65 +1,76 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma_fit", - "InstitutionName": "Mc_Connell_Brain_Imaging_Centre", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "University_Street_3801_Montreal_District_CA_H3A_2B4", - "DeviceSerialNumber": "167017", - "StationName": "MRC35056", - "BodyPartExamined": "BRAIN", - "PatientPosition": "HFS", - "ProcedureStepDescription": "Functional_Dr._Doyon", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-MT1", - "ProtocolName": "GRE-MT1", - "ScanningSequence": "GR", - "SequenceVariant": "MTC_SP", - "ScanOptions": "MT", - "SequenceName": "_fl3d1", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS2D"], - "SeriesNumber": 8, - "AcquisitionTime": "12:30:0.935000", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SAR": 0.629389, - "EchoTime": 0.00313, - "RepetitionTime": 0.035, - "FlipAngle": 9, - "PartialFourier": 1, - "BaseResolution": 256, - "ShimSetting": [ - 315, - -11811, - -6682, - -240, - 20, - 1588, - -379, - -33 ], - "TxRefAmp": 305.502, - "PhaseResolution": 1, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC7;NC1,2", - "PulseSequenceDetails": "%SiemensSeq%_gre", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 100, - "PhaseEncodingSteps": 255, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 256, - "ParallelReductionFactorInPlane": 2, - "PixelBandwidth": 260, - "DwellTime": 7.5e-06, - "ImageOrientationPatientDICOM": [ - 1, - 0, - 0, - 0, - 0.989526, - 0.144356 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 GCC5.3.1" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma_fit", + "InstitutionName": "Mc_Connell_Brain_Imaging_Centre", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "University_Street_3801_Montreal_District_CA_H3A_2B4", + "DeviceSerialNumber": "167017", + "StationName": "MRC35056", + "BodyPartExamined": "BRAIN", + "PatientPosition": "HFS", + "ProcedureStepDescription": "Functional_Dr._Doyon", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-MT1", + "ProtocolName": "GRE-MT1", + "ScanningSequence": "GR", + "SequenceVariant": "MTC_SP", + "ScanOptions": "MT", + "SequenceName": "_fl3d1", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS2D" + ], + "SeriesNumber": 8, + "AcquisitionTime": "12:30:0.935000", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SAR": 0.629389, + "EchoTime": 0.00313, + "RepetitionTime": 0.035, + "FlipAngle": 9, + "PartialFourier": 1, + "BaseResolution": 256, + "ShimSetting": [ + 315, + -11811, + -6682, + -240, + 20, + 1588, + -379, + -33 + ], + "TxRefAmp": 305.502, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC7;NC1,2", + "PulseSequenceDetails": "%SiemensSeq%_gre", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 255, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "ParallelReductionFactorInPlane": 2, + "PixelBandwidth": 260, + "DwellTime": 7.5e-06, + "ImageOrientationPatientDICOM": [ + 1, + 0, + 0, + 0, + 0.989526, + 0.144356 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 GCC5.3.1", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-mniS01/anat/sub-mniS01_flip-2_mt-off_space-other_MTS.json b/derivatives/data_preprocessed/sub-mniS01/anat/sub-mniS01_flip-2_mt-off_space-other_MTS.json index 5f906c2b2e..48444c783f 100644 --- a/derivatives/data_preprocessed/sub-mniS01/anat/sub-mniS01_flip-2_mt-off_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-mniS01/anat/sub-mniS01_flip-2_mt-off_space-other_MTS.json @@ -1,64 +1,75 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma_fit", - "InstitutionName": "Mc_Connell_Brain_Imaging_Centre", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "University_Street_3801_Montreal_District_CA_H3A_2B4", - "DeviceSerialNumber": "167017", - "StationName": "MRC35056", - "BodyPartExamined": "BRAIN", - "PatientPosition": "HFS", - "ProcedureStepDescription": "Functional_Dr._Doyon", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-T1w", - "ProtocolName": "GRE-T1w", - "ScanningSequence": "GR", - "SequenceVariant": "SP", - "SequenceName": "_fl3d1", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS2D"], - "SeriesNumber": 10, - "AcquisitionTime": "12:34:25.992500", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SAR": 0.0408076, - "EchoTime": 0.00313, - "RepetitionTime": 0.015, - "FlipAngle": 15, - "PartialFourier": 1, - "BaseResolution": 256, - "ShimSetting": [ - 315, - -11811, - -6682, - -240, - 20, - 1588, - -379, - -33 ], - "TxRefAmp": 305.502, - "PhaseResolution": 1, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC7;NC1,2", - "PulseSequenceDetails": "%SiemensSeq%_gre", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 100, - "PhaseEncodingSteps": 255, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 256, - "ParallelReductionFactorInPlane": 2, - "PixelBandwidth": 260, - "DwellTime": 7.5e-06, - "ImageOrientationPatientDICOM": [ - 1, - 0, - 0, - 0, - 0.989526, - 0.144356 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 GCC5.3.1" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma_fit", + "InstitutionName": "Mc_Connell_Brain_Imaging_Centre", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "University_Street_3801_Montreal_District_CA_H3A_2B4", + "DeviceSerialNumber": "167017", + "StationName": "MRC35056", + "BodyPartExamined": "BRAIN", + "PatientPosition": "HFS", + "ProcedureStepDescription": "Functional_Dr._Doyon", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-T1w", + "ProtocolName": "GRE-T1w", + "ScanningSequence": "GR", + "SequenceVariant": "SP", + "SequenceName": "_fl3d1", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS2D" + ], + "SeriesNumber": 10, + "AcquisitionTime": "12:34:25.992500", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SAR": 0.0408076, + "EchoTime": 0.00313, + "RepetitionTime": 0.015, + "FlipAngle": 15, + "PartialFourier": 1, + "BaseResolution": 256, + "ShimSetting": [ + 315, + -11811, + -6682, + -240, + 20, + 1588, + -379, + -33 + ], + "TxRefAmp": 305.502, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC7;NC1,2", + "PulseSequenceDetails": "%SiemensSeq%_gre", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 255, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "ParallelReductionFactorInPlane": 2, + "PixelBandwidth": 260, + "DwellTime": 7.5e-06, + "ImageOrientationPatientDICOM": [ + 1, + 0, + 0, + 0, + 0.989526, + 0.144356 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 GCC5.3.1", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-mniS01/anat/sub-mniS01_space-other_T1w.json b/derivatives/data_preprocessed/sub-mniS01/anat/sub-mniS01_space-other_T1w.json index 1d9eadad55..4c9e21ca9d 100644 --- a/derivatives/data_preprocessed/sub-mniS01/anat/sub-mniS01_space-other_T1w.json +++ b/derivatives/data_preprocessed/sub-mniS01/anat/sub-mniS01_space-other_T1w.json @@ -1,66 +1,79 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma_fit", - "InstitutionName": "Mc_Connell_Brain_Imaging_Centre", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "University_Street_3801_Montreal_District_CA_H3A_2B4", - "DeviceSerialNumber": "167017", - "StationName": "MRC35056", - "BodyPartExamined": "BRAIN", - "PatientPosition": "HFS", - "ProcedureStepDescription": "Functional_Dr._Doyon", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "T1w", - "ProtocolName": "T1w", - "ScanningSequence": "GR_IR", - "SequenceVariant": "SK_SP_MP", - "ScanOptions": "IR", - "SequenceName": "_tfl3d1_16", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS3D", "DIS2D"], - "SeriesNumber": 6, - "AcquisitionTime": "12:20:34.562500", - "AcquisitionNumber": 1, - "SliceThickness": 1, - "SAR": 0.0703238, - "EchoTime": 0.00372, - "RepetitionTime": 2, - "InversionTime": 1, - "FlipAngle": 9, - "PartialFourier": 1, - "BaseResolution": 320, - "ShimSetting": [ - 326, - -11589, - -6664, - 57, - 16, - 3, - -26, - 6 ], - "TxRefAmp": 283.525, - "PhaseResolution": 1, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC1-7;NC1,2", - "PulseSequenceDetails": "%SiemensSeq%_tfl", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 81.25, - "PhaseEncodingSteps": 259, - "AcquisitionMatrixPE": 260, - "ReconMatrixPE": 320, - "ParallelReductionFactorInPlane": 2, - "PixelBandwidth": 150, - "DwellTime": 1.04e-05, - "ImageOrientationPatientDICOM": [ - 0, - 1, - 0, - 0, - 0, - -1 ], - "InPlanePhaseEncodingDirectionDICOM": "ROW", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 GCC5.3.1" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma_fit", + "InstitutionName": "Mc_Connell_Brain_Imaging_Centre", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "University_Street_3801_Montreal_District_CA_H3A_2B4", + "DeviceSerialNumber": "167017", + "StationName": "MRC35056", + "BodyPartExamined": "BRAIN", + "PatientPosition": "HFS", + "ProcedureStepDescription": "Functional_Dr._Doyon", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "T1w", + "ProtocolName": "T1w", + "ScanningSequence": "GR_IR", + "SequenceVariant": "SK_SP_MP", + "ScanOptions": "IR", + "SequenceName": "_tfl3d1_16", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS3D", + "DIS2D" + ], + "SeriesNumber": 6, + "AcquisitionTime": "12:20:34.562500", + "AcquisitionNumber": 1, + "SliceThickness": 1, + "SAR": 0.0703238, + "EchoTime": 0.00372, + "RepetitionTime": 2, + "InversionTime": 1, + "FlipAngle": 9, + "PartialFourier": 1, + "BaseResolution": 320, + "ShimSetting": [ + 326, + -11589, + -6664, + 57, + 16, + 3, + -26, + 6 + ], + "TxRefAmp": 283.525, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC1-7;NC1,2", + "PulseSequenceDetails": "%SiemensSeq%_tfl", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 81.25, + "PhaseEncodingSteps": 259, + "AcquisitionMatrixPE": 260, + "ReconMatrixPE": 320, + "ParallelReductionFactorInPlane": 2, + "PixelBandwidth": 150, + "DwellTime": 1.04e-05, + "ImageOrientationPatientDICOM": [ + 0, + 1, + 0, + 0, + 0, + -1 + ], + "InPlanePhaseEncodingDirectionDICOM": "ROW", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 GCC5.3.1", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-mniS01/anat/sub-mniS01_space-other_T2star.json b/derivatives/data_preprocessed/sub-mniS01/anat/sub-mniS01_space-other_T2star.json index 52e6712dca..1610730e85 100644 --- a/derivatives/data_preprocessed/sub-mniS01/anat/sub-mniS01_space-other_T2star.json +++ b/derivatives/data_preprocessed/sub-mniS01/anat/sub-mniS01_space-other_T2star.json @@ -73,5 +73,9 @@ "InPlanePhaseEncodingDirectionDICOM": "COL", "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20180622 GCC5.3.1", - "AcquisitionDuration": 285.0 + "AcquisitionDuration": 285.0, + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-mniS01/anat/sub-mniS01_space-other_T2w.json b/derivatives/data_preprocessed/sub-mniS01/anat/sub-mniS01_space-other_T2w.json index 4e2d7abc6d..b58f310ebd 100644 --- a/derivatives/data_preprocessed/sub-mniS01/anat/sub-mniS01_space-other_T2w.json +++ b/derivatives/data_preprocessed/sub-mniS01/anat/sub-mniS01_space-other_T2w.json @@ -1,67 +1,80 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma_fit", - "InstitutionName": "Mc_Connell_Brain_Imaging_Centre", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "University_Street_3801_Montreal_District_CA_H3A_2B4", - "DeviceSerialNumber": "167017", - "StationName": "MRC35056", - "BodyPartExamined": "BRAIN", - "PatientPosition": "HFS", - "ProcedureStepDescription": "Functional_Dr._Doyon", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "T2w", - "ProtocolName": "T2w", - "ScanningSequence": "SE", - "SequenceVariant": "SK_SP_OSP", - "ScanOptions": "PFP", - "SequenceName": "_spcR_100", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS3D", "DIS2D"], - "SeriesNumber": 5, - "AcquisitionTime": "12:16:0.110000", - "AcquisitionNumber": 1, - "SliceThickness": 0.8, - "SAR": 0.636352, - "EchoTime": 0.12, - "RepetitionTime": 1.5, - "FlipAngle": 120, - "PartialFourier": 1, - "BaseResolution": 320, - "ShimSetting": [ - 326, - -11589, - -6664, - 57, - 16, - 3, - -26, - 6 ], - "TxRefAmp": 305.502, - "PhaseResolution": 1, - "PhaseOversampling": 0.8, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC5-7;NC1,2", - "PulseSequenceDetails": "%SiemensSeq%_tse_vfl", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 100, - "EchoTrainLength": 76, - "PhaseEncodingSteps": 422, - "AcquisitionMatrixPE": 320, - "ReconMatrixPE": 320, - "ParallelReductionFactorInPlane": 3, - "PixelBandwidth": 625, - "DwellTime": 2.5e-06, - "ImageOrientationPatientDICOM": [ - 0, - 1, - 4.897e-12, - 0, - 4.897e-12, - -1 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 GCC5.3.1" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma_fit", + "InstitutionName": "Mc_Connell_Brain_Imaging_Centre", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "University_Street_3801_Montreal_District_CA_H3A_2B4", + "DeviceSerialNumber": "167017", + "StationName": "MRC35056", + "BodyPartExamined": "BRAIN", + "PatientPosition": "HFS", + "ProcedureStepDescription": "Functional_Dr._Doyon", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "T2w", + "ProtocolName": "T2w", + "ScanningSequence": "SE", + "SequenceVariant": "SK_SP_OSP", + "ScanOptions": "PFP", + "SequenceName": "_spcR_100", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS3D", + "DIS2D" + ], + "SeriesNumber": 5, + "AcquisitionTime": "12:16:0.110000", + "AcquisitionNumber": 1, + "SliceThickness": 0.8, + "SAR": 0.636352, + "EchoTime": 0.12, + "RepetitionTime": 1.5, + "FlipAngle": 120, + "PartialFourier": 1, + "BaseResolution": 320, + "ShimSetting": [ + 326, + -11589, + -6664, + 57, + 16, + 3, + -26, + 6 + ], + "TxRefAmp": 305.502, + "PhaseResolution": 1, + "PhaseOversampling": 0.8, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC5-7;NC1,2", + "PulseSequenceDetails": "%SiemensSeq%_tse_vfl", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "EchoTrainLength": 76, + "PhaseEncodingSteps": 422, + "AcquisitionMatrixPE": 320, + "ReconMatrixPE": 320, + "ParallelReductionFactorInPlane": 3, + "PixelBandwidth": 625, + "DwellTime": 2.5e-06, + "ImageOrientationPatientDICOM": [ + 0, + 1, + 4.897e-12, + 0, + 4.897e-12, + -1 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 GCC5.3.1", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-mniS02/anat/sub-mniS02_flip-1_mt-on_space-other_MTS.json b/derivatives/data_preprocessed/sub-mniS02/anat/sub-mniS02_flip-1_mt-on_space-other_MTS.json index b8bb8b563e..19c7db07e8 100644 --- a/derivatives/data_preprocessed/sub-mniS02/anat/sub-mniS02_flip-1_mt-on_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-mniS02/anat/sub-mniS02_flip-1_mt-on_space-other_MTS.json @@ -1,65 +1,76 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma_fit", - "InstitutionName": "Mc_Connell_Brain_Imaging_Centre", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "University_Street_3801_Montreal_District_CA_H3A_2B4", - "DeviceSerialNumber": "167017", - "StationName": "MRC35056", - "BodyPartExamined": "BRAIN", - "PatientPosition": "HFS", - "ProcedureStepDescription": "Functional_Dr._Doyon", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-MT1", - "ProtocolName": "GRE-MT1", - "ScanningSequence": "GR", - "SequenceVariant": "MTC_SP", - "ScanOptions": "MT", - "SequenceName": "_fl3d1", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS2D"], - "SeriesNumber": 6, - "AcquisitionTime": "13:27:53.947500", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SAR": 0.497425, - "EchoTime": 0.00313, - "RepetitionTime": 0.035, - "FlipAngle": 9, - "PartialFourier": 1, - "BaseResolution": 256, - "ShimSetting": [ - 326, - -11744, - -6769, - -1184, - 295, - 2342, - -166, - -72 ], - "TxRefAmp": 275.75, - "PhaseResolution": 1, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC7;NC1,2", - "PulseSequenceDetails": "%SiemensSeq%_gre", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 100, - "PhaseEncodingSteps": 255, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 256, - "ParallelReductionFactorInPlane": 2, - "PixelBandwidth": 260, - "DwellTime": 7.5e-06, - "ImageOrientationPatientDICOM": [ - 1, - 0, - 0, - 0, - 0.99863, - -0.052336 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 GCC5.3.1" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma_fit", + "InstitutionName": "Mc_Connell_Brain_Imaging_Centre", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "University_Street_3801_Montreal_District_CA_H3A_2B4", + "DeviceSerialNumber": "167017", + "StationName": "MRC35056", + "BodyPartExamined": "BRAIN", + "PatientPosition": "HFS", + "ProcedureStepDescription": "Functional_Dr._Doyon", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-MT1", + "ProtocolName": "GRE-MT1", + "ScanningSequence": "GR", + "SequenceVariant": "MTC_SP", + "ScanOptions": "MT", + "SequenceName": "_fl3d1", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS2D" + ], + "SeriesNumber": 6, + "AcquisitionTime": "13:27:53.947500", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SAR": 0.497425, + "EchoTime": 0.00313, + "RepetitionTime": 0.035, + "FlipAngle": 9, + "PartialFourier": 1, + "BaseResolution": 256, + "ShimSetting": [ + 326, + -11744, + -6769, + -1184, + 295, + 2342, + -166, + -72 + ], + "TxRefAmp": 275.75, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC7;NC1,2", + "PulseSequenceDetails": "%SiemensSeq%_gre", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 255, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "ParallelReductionFactorInPlane": 2, + "PixelBandwidth": 260, + "DwellTime": 7.5e-06, + "ImageOrientationPatientDICOM": [ + 1, + 0, + 0, + 0, + 0.99863, + -0.052336 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 GCC5.3.1", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-mniS02/anat/sub-mniS02_flip-2_mt-off_space-other_MTS.json b/derivatives/data_preprocessed/sub-mniS02/anat/sub-mniS02_flip-2_mt-off_space-other_MTS.json index 40a7338bcd..9880a31f51 100644 --- a/derivatives/data_preprocessed/sub-mniS02/anat/sub-mniS02_flip-2_mt-off_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-mniS02/anat/sub-mniS02_flip-2_mt-off_space-other_MTS.json @@ -1,64 +1,75 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma_fit", - "InstitutionName": "Mc_Connell_Brain_Imaging_Centre", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "University_Street_3801_Montreal_District_CA_H3A_2B4", - "DeviceSerialNumber": "167017", - "StationName": "MRC35056", - "BodyPartExamined": "BRAIN", - "PatientPosition": "HFS", - "ProcedureStepDescription": "Functional_Dr._Doyon", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-T1w", - "ProtocolName": "GRE-T1w", - "ScanningSequence": "GR", - "SequenceVariant": "SP", - "SequenceName": "_fl3d1", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS2D"], - "SeriesNumber": 8, - "AcquisitionTime": "13:32:19.977500", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SAR": 0.0322515, - "EchoTime": 0.00313, - "RepetitionTime": 0.015, - "FlipAngle": 15, - "PartialFourier": 1, - "BaseResolution": 256, - "ShimSetting": [ - 326, - -11744, - -6769, - -1184, - 295, - 2342, - -166, - -72 ], - "TxRefAmp": 275.75, - "PhaseResolution": 1, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC7;NC1,2", - "PulseSequenceDetails": "%SiemensSeq%_gre", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 100, - "PhaseEncodingSteps": 255, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 256, - "ParallelReductionFactorInPlane": 2, - "PixelBandwidth": 260, - "DwellTime": 7.5e-06, - "ImageOrientationPatientDICOM": [ - 1, - 0, - 0, - 0, - 0.99863, - -0.052336 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 GCC5.3.1" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma_fit", + "InstitutionName": "Mc_Connell_Brain_Imaging_Centre", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "University_Street_3801_Montreal_District_CA_H3A_2B4", + "DeviceSerialNumber": "167017", + "StationName": "MRC35056", + "BodyPartExamined": "BRAIN", + "PatientPosition": "HFS", + "ProcedureStepDescription": "Functional_Dr._Doyon", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-T1w", + "ProtocolName": "GRE-T1w", + "ScanningSequence": "GR", + "SequenceVariant": "SP", + "SequenceName": "_fl3d1", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS2D" + ], + "SeriesNumber": 8, + "AcquisitionTime": "13:32:19.977500", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SAR": 0.0322515, + "EchoTime": 0.00313, + "RepetitionTime": 0.015, + "FlipAngle": 15, + "PartialFourier": 1, + "BaseResolution": 256, + "ShimSetting": [ + 326, + -11744, + -6769, + -1184, + 295, + 2342, + -166, + -72 + ], + "TxRefAmp": 275.75, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC7;NC1,2", + "PulseSequenceDetails": "%SiemensSeq%_gre", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 255, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "ParallelReductionFactorInPlane": 2, + "PixelBandwidth": 260, + "DwellTime": 7.5e-06, + "ImageOrientationPatientDICOM": [ + 1, + 0, + 0, + 0, + 0.99863, + -0.052336 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 GCC5.3.1", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-mniS02/anat/sub-mniS02_space-other_T1w.json b/derivatives/data_preprocessed/sub-mniS02/anat/sub-mniS02_space-other_T1w.json index 093b0dad9b..cdba9c361b 100644 --- a/derivatives/data_preprocessed/sub-mniS02/anat/sub-mniS02_space-other_T1w.json +++ b/derivatives/data_preprocessed/sub-mniS02/anat/sub-mniS02_space-other_T1w.json @@ -1,66 +1,79 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma_fit", - "InstitutionName": "Mc_Connell_Brain_Imaging_Centre", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "University_Street_3801_Montreal_District_CA_H3A_2B4", - "DeviceSerialNumber": "167017", - "StationName": "MRC35056", - "BodyPartExamined": "BRAIN", - "PatientPosition": "HFS", - "ProcedureStepDescription": "Functional_Dr._Doyon", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "T1w", - "ProtocolName": "T1w", - "ScanningSequence": "GR_IR", - "SequenceVariant": "SK_SP_MP", - "ScanOptions": "IR", - "SequenceName": "_tfl3d1_16", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS3D", "DIS2D"], - "SeriesNumber": 2, - "AcquisitionTime": "13:14:25.027500", - "AcquisitionNumber": 1, - "SliceThickness": 1, - "SAR": 0.0580755, - "EchoTime": 0.00372, - "RepetitionTime": 2, - "InversionTime": 1, - "FlipAngle": 9, - "PartialFourier": 1, - "BaseResolution": 320, - "ShimSetting": [ - 326, - -11589, - -6664, - 57, - 16, - 3, - -26, - 6 ], - "TxRefAmp": 261.569, - "PhaseResolution": 1, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC1-7;NC1,2", - "PulseSequenceDetails": "%SiemensSeq%_tfl", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 81.25, - "PhaseEncodingSteps": 259, - "AcquisitionMatrixPE": 260, - "ReconMatrixPE": 320, - "ParallelReductionFactorInPlane": 2, - "PixelBandwidth": 150, - "DwellTime": 1.04e-05, - "ImageOrientationPatientDICOM": [ - 0, - 1, - 0, - 0, - 0, - -1 ], - "InPlanePhaseEncodingDirectionDICOM": "ROW", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 GCC5.3.1" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma_fit", + "InstitutionName": "Mc_Connell_Brain_Imaging_Centre", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "University_Street_3801_Montreal_District_CA_H3A_2B4", + "DeviceSerialNumber": "167017", + "StationName": "MRC35056", + "BodyPartExamined": "BRAIN", + "PatientPosition": "HFS", + "ProcedureStepDescription": "Functional_Dr._Doyon", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "T1w", + "ProtocolName": "T1w", + "ScanningSequence": "GR_IR", + "SequenceVariant": "SK_SP_MP", + "ScanOptions": "IR", + "SequenceName": "_tfl3d1_16", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS3D", + "DIS2D" + ], + "SeriesNumber": 2, + "AcquisitionTime": "13:14:25.027500", + "AcquisitionNumber": 1, + "SliceThickness": 1, + "SAR": 0.0580755, + "EchoTime": 0.00372, + "RepetitionTime": 2, + "InversionTime": 1, + "FlipAngle": 9, + "PartialFourier": 1, + "BaseResolution": 320, + "ShimSetting": [ + 326, + -11589, + -6664, + 57, + 16, + 3, + -26, + 6 + ], + "TxRefAmp": 261.569, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC1-7;NC1,2", + "PulseSequenceDetails": "%SiemensSeq%_tfl", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 81.25, + "PhaseEncodingSteps": 259, + "AcquisitionMatrixPE": 260, + "ReconMatrixPE": 320, + "ParallelReductionFactorInPlane": 2, + "PixelBandwidth": 150, + "DwellTime": 1.04e-05, + "ImageOrientationPatientDICOM": [ + 0, + 1, + 0, + 0, + 0, + -1 + ], + "InPlanePhaseEncodingDirectionDICOM": "ROW", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 GCC5.3.1", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-mniS02/anat/sub-mniS02_space-other_T2star.json b/derivatives/data_preprocessed/sub-mniS02/anat/sub-mniS02_space-other_T2star.json index 5e1f2a62e1..11a10c1631 100644 --- a/derivatives/data_preprocessed/sub-mniS02/anat/sub-mniS02_space-other_T2star.json +++ b/derivatives/data_preprocessed/sub-mniS02/anat/sub-mniS02_space-other_T2star.json @@ -73,5 +73,9 @@ "InPlanePhaseEncodingDirectionDICOM": "COL", "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20180622 GCC5.3.1", - "AcquisitionDuration": 285.0 + "AcquisitionDuration": 285.0, + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-mniS02/anat/sub-mniS02_space-other_T2w.json b/derivatives/data_preprocessed/sub-mniS02/anat/sub-mniS02_space-other_T2w.json index 90d7f96f7e..b1e69492e0 100644 --- a/derivatives/data_preprocessed/sub-mniS02/anat/sub-mniS02_space-other_T2w.json +++ b/derivatives/data_preprocessed/sub-mniS02/anat/sub-mniS02_space-other_T2w.json @@ -1,67 +1,80 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma_fit", - "InstitutionName": "Mc_Connell_Brain_Imaging_Centre", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "University_Street_3801_Montreal_District_CA_H3A_2B4", - "DeviceSerialNumber": "167017", - "StationName": "MRC35056", - "BodyPartExamined": "BRAIN", - "PatientPosition": "HFS", - "ProcedureStepDescription": "Functional_Dr._Doyon", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "T2w", - "ProtocolName": "T2w", - "ScanningSequence": "SE", - "SequenceVariant": "SK_SP_OSP", - "ScanOptions": "PFP", - "SequenceName": "_spcR_100", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS3D", "DIS2D"], - "SeriesNumber": 4, - "AcquisitionTime": "13:19:28.992500", - "AcquisitionNumber": 1, - "SliceThickness": 0.8, - "SAR": 0.502928, - "EchoTime": 0.12, - "RepetitionTime": 1.5, - "FlipAngle": 120, - "PartialFourier": 1, - "BaseResolution": 320, - "ShimSetting": [ - 326, - -11589, - -6664, - 57, - 16, - 3, - -26, - 6 ], - "TxRefAmp": 275.75, - "PhaseResolution": 1, - "PhaseOversampling": 0.8, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC5-7;NC1,2", - "PulseSequenceDetails": "%SiemensSeq%_tse_vfl", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 100, - "EchoTrainLength": 76, - "PhaseEncodingSteps": 422, - "AcquisitionMatrixPE": 320, - "ReconMatrixPE": 320, - "ParallelReductionFactorInPlane": 3, - "PixelBandwidth": 625, - "DwellTime": 2.5e-06, - "ImageOrientationPatientDICOM": [ - 0, - 1, - 4.897e-12, - 0, - 4.897e-12, - -1 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 GCC5.3.1" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma_fit", + "InstitutionName": "Mc_Connell_Brain_Imaging_Centre", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "University_Street_3801_Montreal_District_CA_H3A_2B4", + "DeviceSerialNumber": "167017", + "StationName": "MRC35056", + "BodyPartExamined": "BRAIN", + "PatientPosition": "HFS", + "ProcedureStepDescription": "Functional_Dr._Doyon", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "T2w", + "ProtocolName": "T2w", + "ScanningSequence": "SE", + "SequenceVariant": "SK_SP_OSP", + "ScanOptions": "PFP", + "SequenceName": "_spcR_100", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS3D", + "DIS2D" + ], + "SeriesNumber": 4, + "AcquisitionTime": "13:19:28.992500", + "AcquisitionNumber": 1, + "SliceThickness": 0.8, + "SAR": 0.502928, + "EchoTime": 0.12, + "RepetitionTime": 1.5, + "FlipAngle": 120, + "PartialFourier": 1, + "BaseResolution": 320, + "ShimSetting": [ + 326, + -11589, + -6664, + 57, + 16, + 3, + -26, + 6 + ], + "TxRefAmp": 275.75, + "PhaseResolution": 1, + "PhaseOversampling": 0.8, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC5-7;NC1,2", + "PulseSequenceDetails": "%SiemensSeq%_tse_vfl", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "EchoTrainLength": 76, + "PhaseEncodingSteps": 422, + "AcquisitionMatrixPE": 320, + "ReconMatrixPE": 320, + "ParallelReductionFactorInPlane": 3, + "PixelBandwidth": 625, + "DwellTime": 2.5e-06, + "ImageOrientationPatientDICOM": [ + 0, + 1, + 4.897e-12, + 0, + 4.897e-12, + -1 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 GCC5.3.1", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-mniS03/anat/sub-mniS03_flip-1_mt-on_space-other_MTS.json b/derivatives/data_preprocessed/sub-mniS03/anat/sub-mniS03_flip-1_mt-on_space-other_MTS.json index 42f956c00f..55b2cf736c 100644 --- a/derivatives/data_preprocessed/sub-mniS03/anat/sub-mniS03_flip-1_mt-on_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-mniS03/anat/sub-mniS03_flip-1_mt-on_space-other_MTS.json @@ -1,65 +1,76 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma_fit", - "InstitutionName": "Mc_Connell_Brain_Imaging_Centre", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "University_Street_3801_Montreal_District_CA_H3A_2B4", - "DeviceSerialNumber": "167017", - "StationName": "MRC35056", - "BodyPartExamined": "BRAIN", - "PatientPosition": "HFS", - "ProcedureStepDescription": "Functional_Dr._Doyon", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-MT1", - "ProtocolName": "GRE-MT1", - "ScanningSequence": "GR", - "SequenceVariant": "MTC_SP", - "ScanOptions": "MT", - "SequenceName": "_fl3d1", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS2D"], - "SeriesNumber": 7, - "AcquisitionTime": "11:27:53.012500", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SAR": 0.544473, - "EchoTime": 0.00313, - "RepetitionTime": 0.035, - "FlipAngle": 9, - "PartialFourier": 1, - "BaseResolution": 256, - "ShimSetting": [ - 317, - -11725, - -6713, - -1538, - -38, - 2228, - -386, - 41 ], - "TxRefAmp": 276.233, - "PhaseResolution": 1, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC7;NC1,2", - "PulseSequenceDetails": "%SiemensSeq%_gre", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 100, - "PhaseEncodingSteps": 255, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 256, - "ParallelReductionFactorInPlane": 2, - "PixelBandwidth": 260, - "DwellTime": 7.5e-06, - "ImageOrientationPatientDICOM": [ - 1, - 0, - 0, - 0, - 0.996195, - 0.0871557 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 GCC5.3.1" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma_fit", + "InstitutionName": "Mc_Connell_Brain_Imaging_Centre", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "University_Street_3801_Montreal_District_CA_H3A_2B4", + "DeviceSerialNumber": "167017", + "StationName": "MRC35056", + "BodyPartExamined": "BRAIN", + "PatientPosition": "HFS", + "ProcedureStepDescription": "Functional_Dr._Doyon", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-MT1", + "ProtocolName": "GRE-MT1", + "ScanningSequence": "GR", + "SequenceVariant": "MTC_SP", + "ScanOptions": "MT", + "SequenceName": "_fl3d1", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS2D" + ], + "SeriesNumber": 7, + "AcquisitionTime": "11:27:53.012500", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SAR": 0.544473, + "EchoTime": 0.00313, + "RepetitionTime": 0.035, + "FlipAngle": 9, + "PartialFourier": 1, + "BaseResolution": 256, + "ShimSetting": [ + 317, + -11725, + -6713, + -1538, + -38, + 2228, + -386, + 41 + ], + "TxRefAmp": 276.233, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC7;NC1,2", + "PulseSequenceDetails": "%SiemensSeq%_gre", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 255, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "ParallelReductionFactorInPlane": 2, + "PixelBandwidth": 260, + "DwellTime": 7.5e-06, + "ImageOrientationPatientDICOM": [ + 1, + 0, + 0, + 0, + 0.996195, + 0.0871557 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 GCC5.3.1", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-mniS03/anat/sub-mniS03_flip-2_mt-off_space-other_MTS.json b/derivatives/data_preprocessed/sub-mniS03/anat/sub-mniS03_flip-2_mt-off_space-other_MTS.json index cb65fdd68d..5e6df042ec 100644 --- a/derivatives/data_preprocessed/sub-mniS03/anat/sub-mniS03_flip-2_mt-off_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-mniS03/anat/sub-mniS03_flip-2_mt-off_space-other_MTS.json @@ -1,64 +1,75 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma_fit", - "InstitutionName": "Mc_Connell_Brain_Imaging_Centre", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "University_Street_3801_Montreal_District_CA_H3A_2B4", - "DeviceSerialNumber": "167017", - "StationName": "MRC35056", - "BodyPartExamined": "BRAIN", - "PatientPosition": "HFS", - "ProcedureStepDescription": "Functional_Dr._Doyon", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-T1w", - "ProtocolName": "GRE-T1w", - "ScanningSequence": "GR", - "SequenceVariant": "SP", - "SequenceName": "_fl3d1", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS2D"], - "SeriesNumber": 9, - "AcquisitionTime": "11:33:9.035000", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SAR": 0.035302, - "EchoTime": 0.00313, - "RepetitionTime": 0.015, - "FlipAngle": 15, - "PartialFourier": 1, - "BaseResolution": 256, - "ShimSetting": [ - 317, - -11725, - -6713, - -1538, - -38, - 2228, - -386, - 41 ], - "TxRefAmp": 276.233, - "PhaseResolution": 1, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC7;NC1,2", - "PulseSequenceDetails": "%SiemensSeq%_gre", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 100, - "PhaseEncodingSteps": 255, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 256, - "ParallelReductionFactorInPlane": 2, - "PixelBandwidth": 260, - "DwellTime": 7.5e-06, - "ImageOrientationPatientDICOM": [ - 1, - 0, - 0, - 0, - 0.996195, - 0.0871557 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 GCC5.3.1" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma_fit", + "InstitutionName": "Mc_Connell_Brain_Imaging_Centre", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "University_Street_3801_Montreal_District_CA_H3A_2B4", + "DeviceSerialNumber": "167017", + "StationName": "MRC35056", + "BodyPartExamined": "BRAIN", + "PatientPosition": "HFS", + "ProcedureStepDescription": "Functional_Dr._Doyon", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-T1w", + "ProtocolName": "GRE-T1w", + "ScanningSequence": "GR", + "SequenceVariant": "SP", + "SequenceName": "_fl3d1", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS2D" + ], + "SeriesNumber": 9, + "AcquisitionTime": "11:33:9.035000", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SAR": 0.035302, + "EchoTime": 0.00313, + "RepetitionTime": 0.015, + "FlipAngle": 15, + "PartialFourier": 1, + "BaseResolution": 256, + "ShimSetting": [ + 317, + -11725, + -6713, + -1538, + -38, + 2228, + -386, + 41 + ], + "TxRefAmp": 276.233, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC7;NC1,2", + "PulseSequenceDetails": "%SiemensSeq%_gre", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 255, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "ParallelReductionFactorInPlane": 2, + "PixelBandwidth": 260, + "DwellTime": 7.5e-06, + "ImageOrientationPatientDICOM": [ + 1, + 0, + 0, + 0, + 0.996195, + 0.0871557 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 GCC5.3.1", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-mniS03/anat/sub-mniS03_space-other_T1w.json b/derivatives/data_preprocessed/sub-mniS03/anat/sub-mniS03_space-other_T1w.json index 746f228dc0..f3732a2183 100644 --- a/derivatives/data_preprocessed/sub-mniS03/anat/sub-mniS03_space-other_T1w.json +++ b/derivatives/data_preprocessed/sub-mniS03/anat/sub-mniS03_space-other_T1w.json @@ -1,66 +1,79 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma_fit", - "InstitutionName": "Mc_Connell_Brain_Imaging_Centre", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "University_Street_3801_Montreal_District_CA_H3A_2B4", - "DeviceSerialNumber": "167017", - "StationName": "MRC35056", - "BodyPartExamined": "BRAIN", - "PatientPosition": "HFS", - "ProcedureStepDescription": "Functional_Dr._Doyon", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "T1w", - "ProtocolName": "T1w", - "ScanningSequence": "GR_IR", - "SequenceVariant": "SK_SP_MP", - "ScanOptions": "IR", - "SequenceName": "_tfl3d1_16", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS3D", "DIS2D"], - "SeriesNumber": 3, - "AcquisitionTime": "11:10:42.050000", - "AcquisitionNumber": 1, - "SliceThickness": 1, - "SAR": 0.0649536, - "EchoTime": 0.00372, - "RepetitionTime": 2, - "InversionTime": 1, - "FlipAngle": 9, - "PartialFourier": 1, - "BaseResolution": 320, - "ShimSetting": [ - 326, - -11589, - -6664, - 57, - 16, - 3, - -26, - 6 ], - "TxRefAmp": 264.128, - "PhaseResolution": 1, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC1-7;NC1,2", - "PulseSequenceDetails": "%SiemensSeq%_tfl", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 81.25, - "PhaseEncodingSteps": 259, - "AcquisitionMatrixPE": 260, - "ReconMatrixPE": 320, - "ParallelReductionFactorInPlane": 2, - "PixelBandwidth": 150, - "DwellTime": 1.04e-05, - "ImageOrientationPatientDICOM": [ - 0, - 1, - 0, - 0, - 0, - -1 ], - "InPlanePhaseEncodingDirectionDICOM": "ROW", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 GCC5.3.1" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma_fit", + "InstitutionName": "Mc_Connell_Brain_Imaging_Centre", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "University_Street_3801_Montreal_District_CA_H3A_2B4", + "DeviceSerialNumber": "167017", + "StationName": "MRC35056", + "BodyPartExamined": "BRAIN", + "PatientPosition": "HFS", + "ProcedureStepDescription": "Functional_Dr._Doyon", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "T1w", + "ProtocolName": "T1w", + "ScanningSequence": "GR_IR", + "SequenceVariant": "SK_SP_MP", + "ScanOptions": "IR", + "SequenceName": "_tfl3d1_16", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS3D", + "DIS2D" + ], + "SeriesNumber": 3, + "AcquisitionTime": "11:10:42.050000", + "AcquisitionNumber": 1, + "SliceThickness": 1, + "SAR": 0.0649536, + "EchoTime": 0.00372, + "RepetitionTime": 2, + "InversionTime": 1, + "FlipAngle": 9, + "PartialFourier": 1, + "BaseResolution": 320, + "ShimSetting": [ + 326, + -11589, + -6664, + 57, + 16, + 3, + -26, + 6 + ], + "TxRefAmp": 264.128, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC1-7;NC1,2", + "PulseSequenceDetails": "%SiemensSeq%_tfl", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 81.25, + "PhaseEncodingSteps": 259, + "AcquisitionMatrixPE": 260, + "ReconMatrixPE": 320, + "ParallelReductionFactorInPlane": 2, + "PixelBandwidth": 150, + "DwellTime": 1.04e-05, + "ImageOrientationPatientDICOM": [ + 0, + 1, + 0, + 0, + 0, + -1 + ], + "InPlanePhaseEncodingDirectionDICOM": "ROW", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 GCC5.3.1", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-mniS03/anat/sub-mniS03_space-other_T2star.json b/derivatives/data_preprocessed/sub-mniS03/anat/sub-mniS03_space-other_T2star.json index 7946ccde53..b776985e44 100644 --- a/derivatives/data_preprocessed/sub-mniS03/anat/sub-mniS03_space-other_T2star.json +++ b/derivatives/data_preprocessed/sub-mniS03/anat/sub-mniS03_space-other_T2star.json @@ -73,5 +73,9 @@ "InPlanePhaseEncodingDirectionDICOM": "COL", "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20180622 GCC5.3.1", - "AcquisitionDuration": 285.0 + "AcquisitionDuration": 285.0, + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-mniS03/anat/sub-mniS03_space-other_T2w.json b/derivatives/data_preprocessed/sub-mniS03/anat/sub-mniS03_space-other_T2w.json index 1f1987c530..53afef7905 100644 --- a/derivatives/data_preprocessed/sub-mniS03/anat/sub-mniS03_space-other_T2w.json +++ b/derivatives/data_preprocessed/sub-mniS03/anat/sub-mniS03_space-other_T2w.json @@ -1,67 +1,80 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma_fit", - "InstitutionName": "Mc_Connell_Brain_Imaging_Centre", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "University_Street_3801_Montreal_District_CA_H3A_2B4", - "DeviceSerialNumber": "167017", - "StationName": "MRC35056", - "BodyPartExamined": "BRAIN", - "PatientPosition": "HFS", - "ProcedureStepDescription": "Functional_Dr._Doyon", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "T2w", - "ProtocolName": "T2w", - "ScanningSequence": "SE", - "SequenceVariant": "SK_SP_OSP", - "ScanOptions": "PFP", - "SequenceName": "_spcR_100", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS3D", "DIS2D"], - "SeriesNumber": 5, - "AcquisitionTime": "11:17:17.997500", - "AcquisitionNumber": 1, - "SliceThickness": 0.8, - "SAR": 0.564674, - "EchoTime": 0.12, - "RepetitionTime": 1.5, - "FlipAngle": 120, - "PartialFourier": 1, - "BaseResolution": 320, - "ShimSetting": [ - 326, - -11589, - -6664, - 57, - 16, - 3, - -26, - 6 ], - "TxRefAmp": 279.127, - "PhaseResolution": 1, - "PhaseOversampling": 0.8, - "ReceiveCoilName": "Spine_32", - "ReceiveCoilActiveElements": "HC5-7;NC1,2;SP1", - "PulseSequenceDetails": "%SiemensSeq%_tse_vfl", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 100, - "EchoTrainLength": 76, - "PhaseEncodingSteps": 422, - "AcquisitionMatrixPE": 320, - "ReconMatrixPE": 320, - "ParallelReductionFactorInPlane": 3, - "PixelBandwidth": 625, - "DwellTime": 2.5e-06, - "ImageOrientationPatientDICOM": [ - 0, - 1, - 4.897e-12, - 0, - 4.897e-12, - -1 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 GCC5.3.1" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma_fit", + "InstitutionName": "Mc_Connell_Brain_Imaging_Centre", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "University_Street_3801_Montreal_District_CA_H3A_2B4", + "DeviceSerialNumber": "167017", + "StationName": "MRC35056", + "BodyPartExamined": "BRAIN", + "PatientPosition": "HFS", + "ProcedureStepDescription": "Functional_Dr._Doyon", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "T2w", + "ProtocolName": "T2w", + "ScanningSequence": "SE", + "SequenceVariant": "SK_SP_OSP", + "ScanOptions": "PFP", + "SequenceName": "_spcR_100", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS3D", + "DIS2D" + ], + "SeriesNumber": 5, + "AcquisitionTime": "11:17:17.997500", + "AcquisitionNumber": 1, + "SliceThickness": 0.8, + "SAR": 0.564674, + "EchoTime": 0.12, + "RepetitionTime": 1.5, + "FlipAngle": 120, + "PartialFourier": 1, + "BaseResolution": 320, + "ShimSetting": [ + 326, + -11589, + -6664, + 57, + 16, + 3, + -26, + 6 + ], + "TxRefAmp": 279.127, + "PhaseResolution": 1, + "PhaseOversampling": 0.8, + "ReceiveCoilName": "Spine_32", + "ReceiveCoilActiveElements": "HC5-7;NC1,2;SP1", + "PulseSequenceDetails": "%SiemensSeq%_tse_vfl", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "EchoTrainLength": 76, + "PhaseEncodingSteps": 422, + "AcquisitionMatrixPE": 320, + "ReconMatrixPE": 320, + "ParallelReductionFactorInPlane": 3, + "PixelBandwidth": 625, + "DwellTime": 2.5e-06, + "ImageOrientationPatientDICOM": [ + 0, + 1, + 4.897e-12, + 0, + 4.897e-12, + -1 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 GCC5.3.1", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-mniS04/anat/sub-mniS04_flip-1_mt-on_space-other_MTS.json b/derivatives/data_preprocessed/sub-mniS04/anat/sub-mniS04_flip-1_mt-on_space-other_MTS.json index 421b983579..df70ac8b24 100644 --- a/derivatives/data_preprocessed/sub-mniS04/anat/sub-mniS04_flip-1_mt-on_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-mniS04/anat/sub-mniS04_flip-1_mt-on_space-other_MTS.json @@ -1,65 +1,76 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma_fit", - "InstitutionName": "Mc_Connell_Brain_Imaging_Centre", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "University_Street_3801_Montreal_District_CA_H3A_2B4", - "DeviceSerialNumber": "167017", - "StationName": "MRC35056", - "BodyPartExamined": "BRAIN", - "PatientPosition": "HFS", - "ProcedureStepDescription": "Functional_Dr._Doyon", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-MT1", - "ProtocolName": "GRE-MT1", - "ScanningSequence": "GR", - "SequenceVariant": "MTC_SP", - "ScanOptions": "MT", - "SequenceName": "_fl3d1", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS2D"], - "SeriesNumber": 7, - "AcquisitionTime": "13:35:39.957500", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SAR": 0.548223, - "EchoTime": 0.00313, - "RepetitionTime": 0.035, - "FlipAngle": 9, - "PartialFourier": 1, - "BaseResolution": 256, - "ShimSetting": [ - 354, - -11676, - -6757, - -1484, - 213, - 3034, - -209, - -46 ], - "TxRefAmp": 293.863, - "PhaseResolution": 1, - "ReceiveCoilName": "Spine_32", - "ReceiveCoilActiveElements": "HC7;NC1,2;SP1", - "PulseSequenceDetails": "%SiemensSeq%_gre", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 100, - "PhaseEncodingSteps": 255, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 256, - "ParallelReductionFactorInPlane": 2, - "PixelBandwidth": 260, - "DwellTime": 7.5e-06, - "ImageOrientationPatientDICOM": [ - 1, - -6.84436e-05, - 0.00047011, - -7.77667e-09, - 0.989565, - 0.144088 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 GCC5.3.1" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma_fit", + "InstitutionName": "Mc_Connell_Brain_Imaging_Centre", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "University_Street_3801_Montreal_District_CA_H3A_2B4", + "DeviceSerialNumber": "167017", + "StationName": "MRC35056", + "BodyPartExamined": "BRAIN", + "PatientPosition": "HFS", + "ProcedureStepDescription": "Functional_Dr._Doyon", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-MT1", + "ProtocolName": "GRE-MT1", + "ScanningSequence": "GR", + "SequenceVariant": "MTC_SP", + "ScanOptions": "MT", + "SequenceName": "_fl3d1", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS2D" + ], + "SeriesNumber": 7, + "AcquisitionTime": "13:35:39.957500", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SAR": 0.548223, + "EchoTime": 0.00313, + "RepetitionTime": 0.035, + "FlipAngle": 9, + "PartialFourier": 1, + "BaseResolution": 256, + "ShimSetting": [ + 354, + -11676, + -6757, + -1484, + 213, + 3034, + -209, + -46 + ], + "TxRefAmp": 293.863, + "PhaseResolution": 1, + "ReceiveCoilName": "Spine_32", + "ReceiveCoilActiveElements": "HC7;NC1,2;SP1", + "PulseSequenceDetails": "%SiemensSeq%_gre", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 255, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "ParallelReductionFactorInPlane": 2, + "PixelBandwidth": 260, + "DwellTime": 7.5e-06, + "ImageOrientationPatientDICOM": [ + 1, + -6.84436e-05, + 0.00047011, + -7.77667e-09, + 0.989565, + 0.144088 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 GCC5.3.1", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-mniS04/anat/sub-mniS04_flip-2_mt-off_space-other_MTS.json b/derivatives/data_preprocessed/sub-mniS04/anat/sub-mniS04_flip-2_mt-off_space-other_MTS.json index 8171eee7a9..1c31fc24a7 100644 --- a/derivatives/data_preprocessed/sub-mniS04/anat/sub-mniS04_flip-2_mt-off_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-mniS04/anat/sub-mniS04_flip-2_mt-off_space-other_MTS.json @@ -1,64 +1,75 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma_fit", - "InstitutionName": "Mc_Connell_Brain_Imaging_Centre", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "University_Street_3801_Montreal_District_CA_H3A_2B4", - "DeviceSerialNumber": "167017", - "StationName": "MRC35056", - "BodyPartExamined": "BRAIN", - "PatientPosition": "HFS", - "ProcedureStepDescription": "Functional_Dr._Doyon", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-T1w", - "ProtocolName": "GRE-T1w", - "ScanningSequence": "GR", - "SequenceVariant": "SP", - "SequenceName": "_fl3d1", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS2D"], - "SeriesNumber": 9, - "AcquisitionTime": "13:40:6.157500", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SAR": 0.0355451, - "EchoTime": 0.00313, - "RepetitionTime": 0.015, - "FlipAngle": 15, - "PartialFourier": 1, - "BaseResolution": 256, - "ShimSetting": [ - 354, - -11676, - -6757, - -1484, - 213, - 3034, - -209, - -46 ], - "TxRefAmp": 293.863, - "PhaseResolution": 1, - "ReceiveCoilName": "Spine_32", - "ReceiveCoilActiveElements": "HC7;NC1,2;SP1", - "PulseSequenceDetails": "%SiemensSeq%_gre", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 100, - "PhaseEncodingSteps": 255, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 256, - "ParallelReductionFactorInPlane": 2, - "PixelBandwidth": 260, - "DwellTime": 7.5e-06, - "ImageOrientationPatientDICOM": [ - 1, - -6.84436e-05, - 0.00047011, - -7.77667e-09, - 0.989565, - 0.144088 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 GCC5.3.1" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma_fit", + "InstitutionName": "Mc_Connell_Brain_Imaging_Centre", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "University_Street_3801_Montreal_District_CA_H3A_2B4", + "DeviceSerialNumber": "167017", + "StationName": "MRC35056", + "BodyPartExamined": "BRAIN", + "PatientPosition": "HFS", + "ProcedureStepDescription": "Functional_Dr._Doyon", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-T1w", + "ProtocolName": "GRE-T1w", + "ScanningSequence": "GR", + "SequenceVariant": "SP", + "SequenceName": "_fl3d1", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS2D" + ], + "SeriesNumber": 9, + "AcquisitionTime": "13:40:6.157500", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SAR": 0.0355451, + "EchoTime": 0.00313, + "RepetitionTime": 0.015, + "FlipAngle": 15, + "PartialFourier": 1, + "BaseResolution": 256, + "ShimSetting": [ + 354, + -11676, + -6757, + -1484, + 213, + 3034, + -209, + -46 + ], + "TxRefAmp": 293.863, + "PhaseResolution": 1, + "ReceiveCoilName": "Spine_32", + "ReceiveCoilActiveElements": "HC7;NC1,2;SP1", + "PulseSequenceDetails": "%SiemensSeq%_gre", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 255, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "ParallelReductionFactorInPlane": 2, + "PixelBandwidth": 260, + "DwellTime": 7.5e-06, + "ImageOrientationPatientDICOM": [ + 1, + -6.84436e-05, + 0.00047011, + -7.77667e-09, + 0.989565, + 0.144088 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 GCC5.3.1", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-mniS04/anat/sub-mniS04_space-other_T1w.json b/derivatives/data_preprocessed/sub-mniS04/anat/sub-mniS04_space-other_T1w.json index 783dfaa5ec..f2eaad16b3 100644 --- a/derivatives/data_preprocessed/sub-mniS04/anat/sub-mniS04_space-other_T1w.json +++ b/derivatives/data_preprocessed/sub-mniS04/anat/sub-mniS04_space-other_T1w.json @@ -1,66 +1,79 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma_fit", - "InstitutionName": "Mc_Connell_Brain_Imaging_Centre", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "University_Street_3801_Montreal_District_CA_H3A_2B4", - "DeviceSerialNumber": "167017", - "StationName": "MRC35056", - "BodyPartExamined": "BRAIN", - "PatientPosition": "HFS", - "ProcedureStepDescription": "Functional_Dr._Doyon", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "T1w", - "ProtocolName": "T1w", - "ScanningSequence": "GR_IR", - "SequenceVariant": "SK_SP_MP", - "ScanOptions": "IR", - "SequenceName": "_tfl3d1_16", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS3D", "DIS2D"], - "SeriesNumber": 3, - "AcquisitionTime": "13:19:27.177500", - "AcquisitionNumber": 1, - "SliceThickness": 1, - "SAR": 0.0690802, - "EchoTime": 0.00372, - "RepetitionTime": 2, - "InversionTime": 1, - "FlipAngle": 9, - "PartialFourier": 1, - "BaseResolution": 320, - "ShimSetting": [ - 326, - -11589, - -6664, - 57, - 16, - 3, - -26, - 6 ], - "TxRefAmp": 288.34, - "PhaseResolution": 1, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC1-7;NC1,2", - "PulseSequenceDetails": "%SiemensSeq%_tfl", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 81.25, - "PhaseEncodingSteps": 259, - "AcquisitionMatrixPE": 260, - "ReconMatrixPE": 320, - "ParallelReductionFactorInPlane": 2, - "PixelBandwidth": 150, - "DwellTime": 1.04e-05, - "ImageOrientationPatientDICOM": [ - 0, - 1, - 0, - -0.052336, - 0, - -0.99863 ], - "InPlanePhaseEncodingDirectionDICOM": "ROW", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 GCC5.3.1" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma_fit", + "InstitutionName": "Mc_Connell_Brain_Imaging_Centre", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "University_Street_3801_Montreal_District_CA_H3A_2B4", + "DeviceSerialNumber": "167017", + "StationName": "MRC35056", + "BodyPartExamined": "BRAIN", + "PatientPosition": "HFS", + "ProcedureStepDescription": "Functional_Dr._Doyon", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "T1w", + "ProtocolName": "T1w", + "ScanningSequence": "GR_IR", + "SequenceVariant": "SK_SP_MP", + "ScanOptions": "IR", + "SequenceName": "_tfl3d1_16", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS3D", + "DIS2D" + ], + "SeriesNumber": 3, + "AcquisitionTime": "13:19:27.177500", + "AcquisitionNumber": 1, + "SliceThickness": 1, + "SAR": 0.0690802, + "EchoTime": 0.00372, + "RepetitionTime": 2, + "InversionTime": 1, + "FlipAngle": 9, + "PartialFourier": 1, + "BaseResolution": 320, + "ShimSetting": [ + 326, + -11589, + -6664, + 57, + 16, + 3, + -26, + 6 + ], + "TxRefAmp": 288.34, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC1-7;NC1,2", + "PulseSequenceDetails": "%SiemensSeq%_tfl", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 81.25, + "PhaseEncodingSteps": 259, + "AcquisitionMatrixPE": 260, + "ReconMatrixPE": 320, + "ParallelReductionFactorInPlane": 2, + "PixelBandwidth": 150, + "DwellTime": 1.04e-05, + "ImageOrientationPatientDICOM": [ + 0, + 1, + 0, + -0.052336, + 0, + -0.99863 + ], + "InPlanePhaseEncodingDirectionDICOM": "ROW", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 GCC5.3.1", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-mniS04/anat/sub-mniS04_space-other_T2star.json b/derivatives/data_preprocessed/sub-mniS04/anat/sub-mniS04_space-other_T2star.json index c59b11f006..ddb21dae95 100644 --- a/derivatives/data_preprocessed/sub-mniS04/anat/sub-mniS04_space-other_T2star.json +++ b/derivatives/data_preprocessed/sub-mniS04/anat/sub-mniS04_space-other_T2star.json @@ -73,5 +73,9 @@ "InPlanePhaseEncodingDirectionDICOM": "COL", "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20180622 GCC5.3.1", - "AcquisitionDuration": 285.0 + "AcquisitionDuration": 285.0, + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-mniS04/anat/sub-mniS04_space-other_T2w.json b/derivatives/data_preprocessed/sub-mniS04/anat/sub-mniS04_space-other_T2w.json index 046e892ebb..0a108efea0 100644 --- a/derivatives/data_preprocessed/sub-mniS04/anat/sub-mniS04_space-other_T2w.json +++ b/derivatives/data_preprocessed/sub-mniS04/anat/sub-mniS04_space-other_T2w.json @@ -1,67 +1,80 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma_fit", - "InstitutionName": "Mc_Connell_Brain_Imaging_Centre", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "University_Street_3801_Montreal_District_CA_H3A_2B4", - "DeviceSerialNumber": "167017", - "StationName": "MRC35056", - "BodyPartExamined": "BRAIN", - "PatientPosition": "HFS", - "ProcedureStepDescription": "Functional_Dr._Doyon", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "T2w", - "ProtocolName": "T2w", - "ScanningSequence": "SE", - "SequenceVariant": "SK_SP_OSP", - "ScanOptions": "PFP", - "SequenceName": "_spcR_100", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS3D", "DIS2D"], - "SeriesNumber": 5, - "AcquisitionTime": "13:26:30.012500", - "AcquisitionNumber": 1, - "SliceThickness": 0.8, - "SAR": 0.554289, - "EchoTime": 0.12, - "RepetitionTime": 1.5, - "FlipAngle": 120, - "PartialFourier": 1, - "BaseResolution": 320, - "ShimSetting": [ - 326, - -11589, - -6664, - 57, - 16, - 3, - -26, - 6 ], - "TxRefAmp": 293.863, - "PhaseResolution": 1, - "PhaseOversampling": 0.8, - "ReceiveCoilName": "Spine_32", - "ReceiveCoilActiveElements": "HC5-7;NC1,2;SP1", - "PulseSequenceDetails": "%SiemensSeq%_tse_vfl", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 100, - "EchoTrainLength": 76, - "PhaseEncodingSteps": 422, - "AcquisitionMatrixPE": 320, - "ReconMatrixPE": 320, - "ParallelReductionFactorInPlane": 3, - "PixelBandwidth": 625, - "DwellTime": 2.5e-06, - "ImageOrientationPatientDICOM": [ - 2.56e-13, - 1, - 4.89e-12, - -0.052336, - 4.897e-12, - -0.99863 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 GCC5.3.1" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma_fit", + "InstitutionName": "Mc_Connell_Brain_Imaging_Centre", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "University_Street_3801_Montreal_District_CA_H3A_2B4", + "DeviceSerialNumber": "167017", + "StationName": "MRC35056", + "BodyPartExamined": "BRAIN", + "PatientPosition": "HFS", + "ProcedureStepDescription": "Functional_Dr._Doyon", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "T2w", + "ProtocolName": "T2w", + "ScanningSequence": "SE", + "SequenceVariant": "SK_SP_OSP", + "ScanOptions": "PFP", + "SequenceName": "_spcR_100", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS3D", + "DIS2D" + ], + "SeriesNumber": 5, + "AcquisitionTime": "13:26:30.012500", + "AcquisitionNumber": 1, + "SliceThickness": 0.8, + "SAR": 0.554289, + "EchoTime": 0.12, + "RepetitionTime": 1.5, + "FlipAngle": 120, + "PartialFourier": 1, + "BaseResolution": 320, + "ShimSetting": [ + 326, + -11589, + -6664, + 57, + 16, + 3, + -26, + 6 + ], + "TxRefAmp": 293.863, + "PhaseResolution": 1, + "PhaseOversampling": 0.8, + "ReceiveCoilName": "Spine_32", + "ReceiveCoilActiveElements": "HC5-7;NC1,2;SP1", + "PulseSequenceDetails": "%SiemensSeq%_tse_vfl", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "EchoTrainLength": 76, + "PhaseEncodingSteps": 422, + "AcquisitionMatrixPE": 320, + "ReconMatrixPE": 320, + "ParallelReductionFactorInPlane": 3, + "PixelBandwidth": 625, + "DwellTime": 2.5e-06, + "ImageOrientationPatientDICOM": [ + 2.56e-13, + 1, + 4.89e-12, + -0.052336, + 4.897e-12, + -0.99863 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 GCC5.3.1", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-mniS05/anat/sub-mniS05_flip-1_mt-on_space-other_MTS.json b/derivatives/data_preprocessed/sub-mniS05/anat/sub-mniS05_flip-1_mt-on_space-other_MTS.json index 413bfe3494..94ccfc82bb 100644 --- a/derivatives/data_preprocessed/sub-mniS05/anat/sub-mniS05_flip-1_mt-on_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-mniS05/anat/sub-mniS05_flip-1_mt-on_space-other_MTS.json @@ -1,65 +1,76 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma_fit", - "InstitutionName": "Mc_Connell_Brain_Imaging_Centre", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "University_Street_3801_Montreal_District_CA_H3A_2B4", - "DeviceSerialNumber": "167017", - "StationName": "MRC35056", - "BodyPartExamined": "BRAIN", - "PatientPosition": "HFS", - "ProcedureStepDescription": "Functional_Dr._Doyon", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-MT1", - "ProtocolName": "GRE-MT1", - "ScanningSequence": "GR", - "SequenceVariant": "MTC_SP", - "ScanOptions": "MT", - "SequenceName": "_fl3d1", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS2D"], - "SeriesNumber": 7, - "AcquisitionTime": "14:12:51.960000", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SAR": 0.557782, - "EchoTime": 0.00313, - "RepetitionTime": 0.035, - "FlipAngle": 9, - "PartialFourier": 1, - "BaseResolution": 256, - "ShimSetting": [ - 304, - -11739, - -6615, - -1192, - 226, - 2200, - -168, - -106 ], - "TxRefAmp": 282.842, - "PhaseResolution": 1, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC7;NC1,2", - "PulseSequenceDetails": "%SiemensSeq%_gre", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 100, - "PhaseEncodingSteps": 255, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 256, - "ParallelReductionFactorInPlane": 2, - "PixelBandwidth": 260, - "DwellTime": 7.5e-06, - "ImageOrientationPatientDICOM": [ - 1, - 0, - 0, - 0, - 0.996195, - 0.0871557 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 GCC5.3.1" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma_fit", + "InstitutionName": "Mc_Connell_Brain_Imaging_Centre", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "University_Street_3801_Montreal_District_CA_H3A_2B4", + "DeviceSerialNumber": "167017", + "StationName": "MRC35056", + "BodyPartExamined": "BRAIN", + "PatientPosition": "HFS", + "ProcedureStepDescription": "Functional_Dr._Doyon", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-MT1", + "ProtocolName": "GRE-MT1", + "ScanningSequence": "GR", + "SequenceVariant": "MTC_SP", + "ScanOptions": "MT", + "SequenceName": "_fl3d1", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS2D" + ], + "SeriesNumber": 7, + "AcquisitionTime": "14:12:51.960000", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SAR": 0.557782, + "EchoTime": 0.00313, + "RepetitionTime": 0.035, + "FlipAngle": 9, + "PartialFourier": 1, + "BaseResolution": 256, + "ShimSetting": [ + 304, + -11739, + -6615, + -1192, + 226, + 2200, + -168, + -106 + ], + "TxRefAmp": 282.842, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC7;NC1,2", + "PulseSequenceDetails": "%SiemensSeq%_gre", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 255, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "ParallelReductionFactorInPlane": 2, + "PixelBandwidth": 260, + "DwellTime": 7.5e-06, + "ImageOrientationPatientDICOM": [ + 1, + 0, + 0, + 0, + 0.996195, + 0.0871557 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 GCC5.3.1", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-mniS05/anat/sub-mniS05_flip-2_mt-off_space-other_MTS.json b/derivatives/data_preprocessed/sub-mniS05/anat/sub-mniS05_flip-2_mt-off_space-other_MTS.json index e447454a47..8bef221360 100644 --- a/derivatives/data_preprocessed/sub-mniS05/anat/sub-mniS05_flip-2_mt-off_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-mniS05/anat/sub-mniS05_flip-2_mt-off_space-other_MTS.json @@ -1,64 +1,75 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma_fit", - "InstitutionName": "Mc_Connell_Brain_Imaging_Centre", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "University_Street_3801_Montreal_District_CA_H3A_2B4", - "DeviceSerialNumber": "167017", - "StationName": "MRC35056", - "BodyPartExamined": "BRAIN", - "PatientPosition": "HFS", - "ProcedureStepDescription": "Functional_Dr._Doyon", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-T1w", - "ProtocolName": "GRE-T1w", - "ScanningSequence": "GR", - "SequenceVariant": "SP", - "SequenceName": "_fl3d1", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS2D"], - "SeriesNumber": 11, - "AcquisitionTime": "14:17:29.012500", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SAR": 0.0361648, - "EchoTime": 0.00313, - "RepetitionTime": 0.015, - "FlipAngle": 15, - "PartialFourier": 1, - "BaseResolution": 256, - "ShimSetting": [ - 304, - -11739, - -6615, - -1192, - 226, - 2200, - -168, - -106 ], - "TxRefAmp": 282.842, - "PhaseResolution": 1, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC7;NC1,2", - "PulseSequenceDetails": "%SiemensSeq%_gre", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 100, - "PhaseEncodingSteps": 255, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 256, - "ParallelReductionFactorInPlane": 2, - "PixelBandwidth": 260, - "DwellTime": 7.5e-06, - "ImageOrientationPatientDICOM": [ - 1, - 0, - 0, - 0, - 0.996195, - 0.0871557 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 GCC5.3.1" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma_fit", + "InstitutionName": "Mc_Connell_Brain_Imaging_Centre", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "University_Street_3801_Montreal_District_CA_H3A_2B4", + "DeviceSerialNumber": "167017", + "StationName": "MRC35056", + "BodyPartExamined": "BRAIN", + "PatientPosition": "HFS", + "ProcedureStepDescription": "Functional_Dr._Doyon", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-T1w", + "ProtocolName": "GRE-T1w", + "ScanningSequence": "GR", + "SequenceVariant": "SP", + "SequenceName": "_fl3d1", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS2D" + ], + "SeriesNumber": 11, + "AcquisitionTime": "14:17:29.012500", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SAR": 0.0361648, + "EchoTime": 0.00313, + "RepetitionTime": 0.015, + "FlipAngle": 15, + "PartialFourier": 1, + "BaseResolution": 256, + "ShimSetting": [ + 304, + -11739, + -6615, + -1192, + 226, + 2200, + -168, + -106 + ], + "TxRefAmp": 282.842, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC7;NC1,2", + "PulseSequenceDetails": "%SiemensSeq%_gre", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 255, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "ParallelReductionFactorInPlane": 2, + "PixelBandwidth": 260, + "DwellTime": 7.5e-06, + "ImageOrientationPatientDICOM": [ + 1, + 0, + 0, + 0, + 0.996195, + 0.0871557 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 GCC5.3.1", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-mniS05/anat/sub-mniS05_space-other_T1w.json b/derivatives/data_preprocessed/sub-mniS05/anat/sub-mniS05_space-other_T1w.json index 34d1edad8e..61762fd53c 100644 --- a/derivatives/data_preprocessed/sub-mniS05/anat/sub-mniS05_space-other_T1w.json +++ b/derivatives/data_preprocessed/sub-mniS05/anat/sub-mniS05_space-other_T1w.json @@ -1,66 +1,79 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma_fit", - "InstitutionName": "Mc_Connell_Brain_Imaging_Centre", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "University_Street_3801_Montreal_District_CA_H3A_2B4", - "DeviceSerialNumber": "167017", - "StationName": "MRC35056", - "BodyPartExamined": "BRAIN", - "PatientPosition": "HFS", - "ProcedureStepDescription": "Functional_Dr._Doyon", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "T1w", - "ProtocolName": "T1w", - "ScanningSequence": "GR_IR", - "SequenceVariant": "SK_SP_MP", - "ScanOptions": "IR", - "SequenceName": "_tfl3d1_16", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS3D", "DIS2D"], - "SeriesNumber": 2, - "AcquisitionTime": "13:56:7.197500", - "AcquisitionNumber": 1, - "SliceThickness": 1, - "SAR": 0.0633876, - "EchoTime": 0.00372, - "RepetitionTime": 2, - "InversionTime": 1, - "FlipAngle": 9, - "PartialFourier": 1, - "BaseResolution": 320, - "ShimSetting": [ - 326, - -11589, - -6664, - 57, - 16, - 3, - -26, - 6 ], - "TxRefAmp": 262.665, - "PhaseResolution": 1, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC1-7;NC1,2", - "PulseSequenceDetails": "%SiemensSeq%_tfl", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 81.25, - "PhaseEncodingSteps": 259, - "AcquisitionMatrixPE": 260, - "ReconMatrixPE": 320, - "ParallelReductionFactorInPlane": 2, - "PixelBandwidth": 150, - "DwellTime": 1.04e-05, - "ImageOrientationPatientDICOM": [ - 0, - 1, - 0, - 0, - 0, - -1 ], - "InPlanePhaseEncodingDirectionDICOM": "ROW", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 GCC5.3.1" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma_fit", + "InstitutionName": "Mc_Connell_Brain_Imaging_Centre", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "University_Street_3801_Montreal_District_CA_H3A_2B4", + "DeviceSerialNumber": "167017", + "StationName": "MRC35056", + "BodyPartExamined": "BRAIN", + "PatientPosition": "HFS", + "ProcedureStepDescription": "Functional_Dr._Doyon", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "T1w", + "ProtocolName": "T1w", + "ScanningSequence": "GR_IR", + "SequenceVariant": "SK_SP_MP", + "ScanOptions": "IR", + "SequenceName": "_tfl3d1_16", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS3D", + "DIS2D" + ], + "SeriesNumber": 2, + "AcquisitionTime": "13:56:7.197500", + "AcquisitionNumber": 1, + "SliceThickness": 1, + "SAR": 0.0633876, + "EchoTime": 0.00372, + "RepetitionTime": 2, + "InversionTime": 1, + "FlipAngle": 9, + "PartialFourier": 1, + "BaseResolution": 320, + "ShimSetting": [ + 326, + -11589, + -6664, + 57, + 16, + 3, + -26, + 6 + ], + "TxRefAmp": 262.665, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC1-7;NC1,2", + "PulseSequenceDetails": "%SiemensSeq%_tfl", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 81.25, + "PhaseEncodingSteps": 259, + "AcquisitionMatrixPE": 260, + "ReconMatrixPE": 320, + "ParallelReductionFactorInPlane": 2, + "PixelBandwidth": 150, + "DwellTime": 1.04e-05, + "ImageOrientationPatientDICOM": [ + 0, + 1, + 0, + 0, + 0, + -1 + ], + "InPlanePhaseEncodingDirectionDICOM": "ROW", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 GCC5.3.1", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-mniS05/anat/sub-mniS05_space-other_T2star.json b/derivatives/data_preprocessed/sub-mniS05/anat/sub-mniS05_space-other_T2star.json index 9a050a6455..de0b62cac2 100644 --- a/derivatives/data_preprocessed/sub-mniS05/anat/sub-mniS05_space-other_T2star.json +++ b/derivatives/data_preprocessed/sub-mniS05/anat/sub-mniS05_space-other_T2star.json @@ -73,5 +73,9 @@ "InPlanePhaseEncodingDirectionDICOM": "COL", "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20180622 GCC5.3.1", - "AcquisitionDuration": 285.0 + "AcquisitionDuration": 285.0, + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-mniS05/anat/sub-mniS05_space-other_T2w.json b/derivatives/data_preprocessed/sub-mniS05/anat/sub-mniS05_space-other_T2w.json index 71ea5a0d4a..710c720e65 100644 --- a/derivatives/data_preprocessed/sub-mniS05/anat/sub-mniS05_space-other_T2w.json +++ b/derivatives/data_preprocessed/sub-mniS05/anat/sub-mniS05_space-other_T2w.json @@ -1,67 +1,80 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma_fit", - "InstitutionName": "Mc_Connell_Brain_Imaging_Centre", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "University_Street_3801_Montreal_District_CA_H3A_2B4", - "DeviceSerialNumber": "167017", - "StationName": "MRC35056", - "BodyPartExamined": "BRAIN", - "PatientPosition": "HFS", - "ProcedureStepDescription": "Functional_Dr._Doyon", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "T2w", - "ProtocolName": "T2w", - "ScanningSequence": "SE", - "SequenceVariant": "SK_SP_OSP", - "ScanOptions": "PFP", - "SequenceName": "_spcR_100", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS3D", "DIS2D"], - "SeriesNumber": 4, - "AcquisitionTime": "14:02:31.707500", - "AcquisitionNumber": 1, - "SliceThickness": 0.8, - "SAR": 0.606183, - "EchoTime": 0.12, - "RepetitionTime": 1.5, - "FlipAngle": 120, - "PartialFourier": 1, - "BaseResolution": 320, - "ShimSetting": [ - 326, - -11589, - -6664, - 57, - 16, - 3, - -26, - 6 ], - "TxRefAmp": 290.993, - "PhaseResolution": 1, - "PhaseOversampling": 0.8, - "ReceiveCoilName": "Spine_32", - "ReceiveCoilActiveElements": "HC5-7;NC1,2;SP1", - "PulseSequenceDetails": "%SiemensSeq%_tse_vfl", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 100, - "EchoTrainLength": 76, - "PhaseEncodingSteps": 422, - "AcquisitionMatrixPE": 320, - "ReconMatrixPE": 320, - "ParallelReductionFactorInPlane": 3, - "PixelBandwidth": 625, - "DwellTime": 2.5e-06, - "ImageOrientationPatientDICOM": [ - 0, - 1, - 4.897e-12, - 0, - 4.897e-12, - -1 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 GCC5.3.1" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma_fit", + "InstitutionName": "Mc_Connell_Brain_Imaging_Centre", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "University_Street_3801_Montreal_District_CA_H3A_2B4", + "DeviceSerialNumber": "167017", + "StationName": "MRC35056", + "BodyPartExamined": "BRAIN", + "PatientPosition": "HFS", + "ProcedureStepDescription": "Functional_Dr._Doyon", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "T2w", + "ProtocolName": "T2w", + "ScanningSequence": "SE", + "SequenceVariant": "SK_SP_OSP", + "ScanOptions": "PFP", + "SequenceName": "_spcR_100", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS3D", + "DIS2D" + ], + "SeriesNumber": 4, + "AcquisitionTime": "14:02:31.707500", + "AcquisitionNumber": 1, + "SliceThickness": 0.8, + "SAR": 0.606183, + "EchoTime": 0.12, + "RepetitionTime": 1.5, + "FlipAngle": 120, + "PartialFourier": 1, + "BaseResolution": 320, + "ShimSetting": [ + 326, + -11589, + -6664, + 57, + 16, + 3, + -26, + 6 + ], + "TxRefAmp": 290.993, + "PhaseResolution": 1, + "PhaseOversampling": 0.8, + "ReceiveCoilName": "Spine_32", + "ReceiveCoilActiveElements": "HC5-7;NC1,2;SP1", + "PulseSequenceDetails": "%SiemensSeq%_tse_vfl", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "EchoTrainLength": 76, + "PhaseEncodingSteps": 422, + "AcquisitionMatrixPE": 320, + "ReconMatrixPE": 320, + "ParallelReductionFactorInPlane": 3, + "PixelBandwidth": 625, + "DwellTime": 2.5e-06, + "ImageOrientationPatientDICOM": [ + 0, + 1, + 4.897e-12, + 0, + 4.897e-12, + -1 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 GCC5.3.1", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-mniS06/anat/sub-mniS06_flip-1_mt-on_space-other_MTS.json b/derivatives/data_preprocessed/sub-mniS06/anat/sub-mniS06_flip-1_mt-on_space-other_MTS.json index 1a02291dff..ee5d67d1ac 100644 --- a/derivatives/data_preprocessed/sub-mniS06/anat/sub-mniS06_flip-1_mt-on_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-mniS06/anat/sub-mniS06_flip-1_mt-on_space-other_MTS.json @@ -1,65 +1,76 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma_fit", - "InstitutionName": "Mc_Connell_Brain_Imaging_Centre", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "University_Street_3801_Montreal_District_CA_H3A_2B4", - "DeviceSerialNumber": "167017", - "StationName": "MRC35056", - "BodyPartExamined": "BRAIN", - "PatientPosition": "HFS", - "ProcedureStepDescription": "Functional_Dr._Doyon", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-MT1", - "ProtocolName": "GRE-MT1", - "ScanningSequence": "GR", - "SequenceVariant": "MTC_SP", - "ScanOptions": "MT", - "SequenceName": "_fl3d1", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS2D"], - "SeriesNumber": 7, - "AcquisitionTime": "16:34:5.042500", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SAR": 0.594357, - "EchoTime": 0.00313, - "RepetitionTime": 0.035, - "FlipAngle": 9, - "PartialFourier": 1, - "BaseResolution": 256, - "ShimSetting": [ - 281, - -11739, - -6695, - -1204, - -90, - 1868, - -260, - -18 ], - "TxRefAmp": 307.887, - "PhaseResolution": 1, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC7;NC1,2", - "PulseSequenceDetails": "%SiemensSeq%_gre", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 100, - "PhaseEncodingSteps": 255, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 256, - "ParallelReductionFactorInPlane": 2, - "PixelBandwidth": 260, - "DwellTime": 7.5e-06, - "ImageOrientationPatientDICOM": [ - 1, - 0, - 0, - 0, - 0.997564, - 0.0697565 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 GCC5.3.1" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma_fit", + "InstitutionName": "Mc_Connell_Brain_Imaging_Centre", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "University_Street_3801_Montreal_District_CA_H3A_2B4", + "DeviceSerialNumber": "167017", + "StationName": "MRC35056", + "BodyPartExamined": "BRAIN", + "PatientPosition": "HFS", + "ProcedureStepDescription": "Functional_Dr._Doyon", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-MT1", + "ProtocolName": "GRE-MT1", + "ScanningSequence": "GR", + "SequenceVariant": "MTC_SP", + "ScanOptions": "MT", + "SequenceName": "_fl3d1", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS2D" + ], + "SeriesNumber": 7, + "AcquisitionTime": "16:34:5.042500", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SAR": 0.594357, + "EchoTime": 0.00313, + "RepetitionTime": 0.035, + "FlipAngle": 9, + "PartialFourier": 1, + "BaseResolution": 256, + "ShimSetting": [ + 281, + -11739, + -6695, + -1204, + -90, + 1868, + -260, + -18 + ], + "TxRefAmp": 307.887, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC7;NC1,2", + "PulseSequenceDetails": "%SiemensSeq%_gre", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 255, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "ParallelReductionFactorInPlane": 2, + "PixelBandwidth": 260, + "DwellTime": 7.5e-06, + "ImageOrientationPatientDICOM": [ + 1, + 0, + 0, + 0, + 0.997564, + 0.0697565 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 GCC5.3.1", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-mniS06/anat/sub-mniS06_flip-2_mt-off_space-other_MTS.json b/derivatives/data_preprocessed/sub-mniS06/anat/sub-mniS06_flip-2_mt-off_space-other_MTS.json index 18157544b9..1382dbfcf1 100644 --- a/derivatives/data_preprocessed/sub-mniS06/anat/sub-mniS06_flip-2_mt-off_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-mniS06/anat/sub-mniS06_flip-2_mt-off_space-other_MTS.json @@ -1,64 +1,75 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma_fit", - "InstitutionName": "Mc_Connell_Brain_Imaging_Centre", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "University_Street_3801_Montreal_District_CA_H3A_2B4", - "DeviceSerialNumber": "167017", - "StationName": "MRC35056", - "BodyPartExamined": "BRAIN", - "PatientPosition": "HFS", - "ProcedureStepDescription": "Functional_Dr._Doyon", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-T1w", - "ProtocolName": "GRE-T1w", - "ScanningSequence": "GR", - "SequenceVariant": "SP", - "SequenceName": "_fl3d1", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS2D"], - "SeriesNumber": 11, - "AcquisitionTime": "16:38:30.957500", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SAR": 0.0385363, - "EchoTime": 0.00313, - "RepetitionTime": 0.015, - "FlipAngle": 15, - "PartialFourier": 1, - "BaseResolution": 256, - "ShimSetting": [ - 281, - -11739, - -6695, - -1204, - -90, - 1868, - -260, - -18 ], - "TxRefAmp": 307.887, - "PhaseResolution": 1, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC7;NC1,2", - "PulseSequenceDetails": "%SiemensSeq%_gre", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 100, - "PhaseEncodingSteps": 255, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 256, - "ParallelReductionFactorInPlane": 2, - "PixelBandwidth": 260, - "DwellTime": 7.5e-06, - "ImageOrientationPatientDICOM": [ - 1, - 0, - 0, - 0, - 0.997564, - 0.0697565 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 GCC5.3.1" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma_fit", + "InstitutionName": "Mc_Connell_Brain_Imaging_Centre", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "University_Street_3801_Montreal_District_CA_H3A_2B4", + "DeviceSerialNumber": "167017", + "StationName": "MRC35056", + "BodyPartExamined": "BRAIN", + "PatientPosition": "HFS", + "ProcedureStepDescription": "Functional_Dr._Doyon", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-T1w", + "ProtocolName": "GRE-T1w", + "ScanningSequence": "GR", + "SequenceVariant": "SP", + "SequenceName": "_fl3d1", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS2D" + ], + "SeriesNumber": 11, + "AcquisitionTime": "16:38:30.957500", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SAR": 0.0385363, + "EchoTime": 0.00313, + "RepetitionTime": 0.015, + "FlipAngle": 15, + "PartialFourier": 1, + "BaseResolution": 256, + "ShimSetting": [ + 281, + -11739, + -6695, + -1204, + -90, + 1868, + -260, + -18 + ], + "TxRefAmp": 307.887, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC7;NC1,2", + "PulseSequenceDetails": "%SiemensSeq%_gre", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 255, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "ParallelReductionFactorInPlane": 2, + "PixelBandwidth": 260, + "DwellTime": 7.5e-06, + "ImageOrientationPatientDICOM": [ + 1, + 0, + 0, + 0, + 0.997564, + 0.0697565 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 GCC5.3.1", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-mniS06/anat/sub-mniS06_space-other_T1w.json b/derivatives/data_preprocessed/sub-mniS06/anat/sub-mniS06_space-other_T1w.json index 0ed346772f..f21fcc20eb 100644 --- a/derivatives/data_preprocessed/sub-mniS06/anat/sub-mniS06_space-other_T1w.json +++ b/derivatives/data_preprocessed/sub-mniS06/anat/sub-mniS06_space-other_T1w.json @@ -1,66 +1,79 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma_fit", - "InstitutionName": "Mc_Connell_Brain_Imaging_Centre", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "University_Street_3801_Montreal_District_CA_H3A_2B4", - "DeviceSerialNumber": "167017", - "StationName": "MRC35056", - "BodyPartExamined": "BRAIN", - "PatientPosition": "HFS", - "ProcedureStepDescription": "Functional_Dr._Doyon", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "T1w", - "ProtocolName": "T1w", - "ScanningSequence": "GR_IR", - "SequenceVariant": "SK_SP_MP", - "ScanOptions": "IR", - "SequenceName": "_tfl3d1_16", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS3D", "DIS2D"], - "SeriesNumber": 2, - "AcquisitionTime": "16:17:24.037500", - "AcquisitionNumber": 1, - "SliceThickness": 1, - "SAR": 0.0748233, - "EchoTime": 0.00372, - "RepetitionTime": 2, - "InversionTime": 1, - "FlipAngle": 9, - "PartialFourier": 1, - "BaseResolution": 320, - "ShimSetting": [ - 326, - -11589, - -6664, - 57, - 16, - 3, - -26, - 6 ], - "TxRefAmp": 302.755, - "PhaseResolution": 1, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC1-7;NC1,2", - "PulseSequenceDetails": "%SiemensSeq%_tfl", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 81.25, - "PhaseEncodingSteps": 259, - "AcquisitionMatrixPE": 260, - "ReconMatrixPE": 320, - "ParallelReductionFactorInPlane": 2, - "PixelBandwidth": 150, - "DwellTime": 1.04e-05, - "ImageOrientationPatientDICOM": [ - 0, - 1, - 0, - 0, - 0, - -1 ], - "InPlanePhaseEncodingDirectionDICOM": "ROW", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 GCC5.3.1" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma_fit", + "InstitutionName": "Mc_Connell_Brain_Imaging_Centre", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "University_Street_3801_Montreal_District_CA_H3A_2B4", + "DeviceSerialNumber": "167017", + "StationName": "MRC35056", + "BodyPartExamined": "BRAIN", + "PatientPosition": "HFS", + "ProcedureStepDescription": "Functional_Dr._Doyon", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "T1w", + "ProtocolName": "T1w", + "ScanningSequence": "GR_IR", + "SequenceVariant": "SK_SP_MP", + "ScanOptions": "IR", + "SequenceName": "_tfl3d1_16", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS3D", + "DIS2D" + ], + "SeriesNumber": 2, + "AcquisitionTime": "16:17:24.037500", + "AcquisitionNumber": 1, + "SliceThickness": 1, + "SAR": 0.0748233, + "EchoTime": 0.00372, + "RepetitionTime": 2, + "InversionTime": 1, + "FlipAngle": 9, + "PartialFourier": 1, + "BaseResolution": 320, + "ShimSetting": [ + 326, + -11589, + -6664, + 57, + 16, + 3, + -26, + 6 + ], + "TxRefAmp": 302.755, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC1-7;NC1,2", + "PulseSequenceDetails": "%SiemensSeq%_tfl", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 81.25, + "PhaseEncodingSteps": 259, + "AcquisitionMatrixPE": 260, + "ReconMatrixPE": 320, + "ParallelReductionFactorInPlane": 2, + "PixelBandwidth": 150, + "DwellTime": 1.04e-05, + "ImageOrientationPatientDICOM": [ + 0, + 1, + 0, + 0, + 0, + -1 + ], + "InPlanePhaseEncodingDirectionDICOM": "ROW", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 GCC5.3.1", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-mniS06/anat/sub-mniS06_space-other_T2star.json b/derivatives/data_preprocessed/sub-mniS06/anat/sub-mniS06_space-other_T2star.json index 9a6425ab4b..f9daa9f663 100644 --- a/derivatives/data_preprocessed/sub-mniS06/anat/sub-mniS06_space-other_T2star.json +++ b/derivatives/data_preprocessed/sub-mniS06/anat/sub-mniS06_space-other_T2star.json @@ -73,5 +73,9 @@ "InPlanePhaseEncodingDirectionDICOM": "COL", "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20180622 GCC5.3.1", - "AcquisitionDuration": 285.0 + "AcquisitionDuration": 285.0, + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-mniS06/anat/sub-mniS06_space-other_T2w.json b/derivatives/data_preprocessed/sub-mniS06/anat/sub-mniS06_space-other_T2w.json index 1f5ef503e1..d535ac6f13 100644 --- a/derivatives/data_preprocessed/sub-mniS06/anat/sub-mniS06_space-other_T2w.json +++ b/derivatives/data_preprocessed/sub-mniS06/anat/sub-mniS06_space-other_T2w.json @@ -1,67 +1,80 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma_fit", - "InstitutionName": "Mc_Connell_Brain_Imaging_Centre", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "University_Street_3801_Montreal_District_CA_H3A_2B4", - "DeviceSerialNumber": "167017", - "StationName": "MRC35056", - "BodyPartExamined": "BRAIN", - "PatientPosition": "HFS", - "ProcedureStepDescription": "Functional_Dr._Doyon", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "T2w", - "ProtocolName": "T2w", - "ScanningSequence": "SE", - "SequenceVariant": "SK_SP_OSP", - "ScanOptions": "PFP", - "SequenceName": "_spcR_100", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS3D", "DIS2D"], - "SeriesNumber": 4, - "AcquisitionTime": "16:24:30.015000", - "AcquisitionNumber": 1, - "SliceThickness": 0.8, - "SAR": 0.651107, - "EchoTime": 0.12, - "RepetitionTime": 1.5, - "FlipAngle": 120, - "PartialFourier": 1, - "BaseResolution": 320, - "ShimSetting": [ - 326, - -11589, - -6664, - 57, - 16, - 3, - -26, - 6 ], - "TxRefAmp": 319.738, - "PhaseResolution": 1, - "PhaseOversampling": 0.8, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC5-7;NC1,2;SP1", - "PulseSequenceDetails": "%SiemensSeq%_tse_vfl", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 100, - "EchoTrainLength": 76, - "PhaseEncodingSteps": 422, - "AcquisitionMatrixPE": 320, - "ReconMatrixPE": 320, - "ParallelReductionFactorInPlane": 3, - "PixelBandwidth": 625, - "DwellTime": 2.5e-06, - "ImageOrientationPatientDICOM": [ - 0, - 1, - 4.897e-12, - 0, - 4.897e-12, - -1 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 GCC5.3.1" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma_fit", + "InstitutionName": "Mc_Connell_Brain_Imaging_Centre", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "University_Street_3801_Montreal_District_CA_H3A_2B4", + "DeviceSerialNumber": "167017", + "StationName": "MRC35056", + "BodyPartExamined": "BRAIN", + "PatientPosition": "HFS", + "ProcedureStepDescription": "Functional_Dr._Doyon", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "T2w", + "ProtocolName": "T2w", + "ScanningSequence": "SE", + "SequenceVariant": "SK_SP_OSP", + "ScanOptions": "PFP", + "SequenceName": "_spcR_100", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS3D", + "DIS2D" + ], + "SeriesNumber": 4, + "AcquisitionTime": "16:24:30.015000", + "AcquisitionNumber": 1, + "SliceThickness": 0.8, + "SAR": 0.651107, + "EchoTime": 0.12, + "RepetitionTime": 1.5, + "FlipAngle": 120, + "PartialFourier": 1, + "BaseResolution": 320, + "ShimSetting": [ + 326, + -11589, + -6664, + 57, + 16, + 3, + -26, + 6 + ], + "TxRefAmp": 319.738, + "PhaseResolution": 1, + "PhaseOversampling": 0.8, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC5-7;NC1,2;SP1", + "PulseSequenceDetails": "%SiemensSeq%_tse_vfl", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "EchoTrainLength": 76, + "PhaseEncodingSteps": 422, + "AcquisitionMatrixPE": 320, + "ReconMatrixPE": 320, + "ParallelReductionFactorInPlane": 3, + "PixelBandwidth": 625, + "DwellTime": 2.5e-06, + "ImageOrientationPatientDICOM": [ + 0, + 1, + 4.897e-12, + 0, + 4.897e-12, + -1 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 GCC5.3.1", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-mniS07/anat/sub-mniS07_flip-1_mt-on_space-other_MTS.json b/derivatives/data_preprocessed/sub-mniS07/anat/sub-mniS07_flip-1_mt-on_space-other_MTS.json index 3d7a74e0a5..d8b852e04b 100644 --- a/derivatives/data_preprocessed/sub-mniS07/anat/sub-mniS07_flip-1_mt-on_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-mniS07/anat/sub-mniS07_flip-1_mt-on_space-other_MTS.json @@ -1,65 +1,76 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma_fit", - "InstitutionName": "Mc_Connell_Brain_Imaging_Centre", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "University_Street_3801_Montreal_District_CA_H3A_2B4", - "DeviceSerialNumber": "167017", - "StationName": "MRC35056", - "BodyPartExamined": "BRAIN", - "PatientPosition": "HFS", - "ProcedureStepDescription": "Functional_Dr._Doyon", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-MT1", - "ProtocolName": "GRE-MT1", - "ScanningSequence": "GR", - "SequenceVariant": "MTC_SP", - "ScanOptions": "MT", - "SequenceName": "_fl3d1", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS2D"], - "SeriesNumber": 7, - "AcquisitionTime": "09:52:37.925000", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SAR": 0.584234, - "EchoTime": 0.00313, - "RepetitionTime": 0.035, - "FlipAngle": 9, - "PartialFourier": 1, - "BaseResolution": 256, - "ShimSetting": [ - 324, - -11591, - -6743, - -1445, - 97, - 2433, - -1160, - -16 ], - "TxRefAmp": 308.343, - "PhaseResolution": 1, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC7;NC1,2", - "PulseSequenceDetails": "%SiemensSeq%_gre", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 100, - "PhaseEncodingSteps": 255, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 256, - "ParallelReductionFactorInPlane": 2, - "PixelBandwidth": 260, - "DwellTime": 7.5e-06, - "ImageOrientationPatientDICOM": [ - 1, - 0, - 0, - 0, - 1, - 0 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 GCC5.3.1" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma_fit", + "InstitutionName": "Mc_Connell_Brain_Imaging_Centre", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "University_Street_3801_Montreal_District_CA_H3A_2B4", + "DeviceSerialNumber": "167017", + "StationName": "MRC35056", + "BodyPartExamined": "BRAIN", + "PatientPosition": "HFS", + "ProcedureStepDescription": "Functional_Dr._Doyon", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-MT1", + "ProtocolName": "GRE-MT1", + "ScanningSequence": "GR", + "SequenceVariant": "MTC_SP", + "ScanOptions": "MT", + "SequenceName": "_fl3d1", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS2D" + ], + "SeriesNumber": 7, + "AcquisitionTime": "09:52:37.925000", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SAR": 0.584234, + "EchoTime": 0.00313, + "RepetitionTime": 0.035, + "FlipAngle": 9, + "PartialFourier": 1, + "BaseResolution": 256, + "ShimSetting": [ + 324, + -11591, + -6743, + -1445, + 97, + 2433, + -1160, + -16 + ], + "TxRefAmp": 308.343, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC7;NC1,2", + "PulseSequenceDetails": "%SiemensSeq%_gre", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 255, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "ParallelReductionFactorInPlane": 2, + "PixelBandwidth": 260, + "DwellTime": 7.5e-06, + "ImageOrientationPatientDICOM": [ + 1, + 0, + 0, + 0, + 1, + 0 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 GCC5.3.1", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-mniS07/anat/sub-mniS07_flip-2_mt-off_space-other_MTS.json b/derivatives/data_preprocessed/sub-mniS07/anat/sub-mniS07_flip-2_mt-off_space-other_MTS.json index 7fbc14bcd1..cfd6715686 100644 --- a/derivatives/data_preprocessed/sub-mniS07/anat/sub-mniS07_flip-2_mt-off_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-mniS07/anat/sub-mniS07_flip-2_mt-off_space-other_MTS.json @@ -1,64 +1,75 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma_fit", - "InstitutionName": "Mc_Connell_Brain_Imaging_Centre", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "University_Street_3801_Montreal_District_CA_H3A_2B4", - "DeviceSerialNumber": "167017", - "StationName": "MRC35056", - "BodyPartExamined": "BRAIN", - "PatientPosition": "HFS", - "ProcedureStepDescription": "Functional_Dr._Doyon", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-T1w", - "ProtocolName": "GRE-T1w", - "ScanningSequence": "GR", - "SequenceVariant": "SP", - "SequenceName": "_fl3d1", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS2D"], - "SeriesNumber": 11, - "AcquisitionTime": "09:57:3.985000", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SAR": 0.0378799, - "EchoTime": 0.00313, - "RepetitionTime": 0.015, - "FlipAngle": 15, - "PartialFourier": 1, - "BaseResolution": 256, - "ShimSetting": [ - 324, - -11591, - -6743, - -1445, - 97, - 2433, - -1160, - -16 ], - "TxRefAmp": 308.343, - "PhaseResolution": 1, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC7;NC1,2", - "PulseSequenceDetails": "%SiemensSeq%_gre", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 100, - "PhaseEncodingSteps": 255, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 256, - "ParallelReductionFactorInPlane": 2, - "PixelBandwidth": 260, - "DwellTime": 7.5e-06, - "ImageOrientationPatientDICOM": [ - 1, - 0, - 0, - 0, - 1, - 0 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 GCC5.3.1" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma_fit", + "InstitutionName": "Mc_Connell_Brain_Imaging_Centre", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "University_Street_3801_Montreal_District_CA_H3A_2B4", + "DeviceSerialNumber": "167017", + "StationName": "MRC35056", + "BodyPartExamined": "BRAIN", + "PatientPosition": "HFS", + "ProcedureStepDescription": "Functional_Dr._Doyon", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-T1w", + "ProtocolName": "GRE-T1w", + "ScanningSequence": "GR", + "SequenceVariant": "SP", + "SequenceName": "_fl3d1", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS2D" + ], + "SeriesNumber": 11, + "AcquisitionTime": "09:57:3.985000", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SAR": 0.0378799, + "EchoTime": 0.00313, + "RepetitionTime": 0.015, + "FlipAngle": 15, + "PartialFourier": 1, + "BaseResolution": 256, + "ShimSetting": [ + 324, + -11591, + -6743, + -1445, + 97, + 2433, + -1160, + -16 + ], + "TxRefAmp": 308.343, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC7;NC1,2", + "PulseSequenceDetails": "%SiemensSeq%_gre", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 255, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "ParallelReductionFactorInPlane": 2, + "PixelBandwidth": 260, + "DwellTime": 7.5e-06, + "ImageOrientationPatientDICOM": [ + 1, + 0, + 0, + 0, + 1, + 0 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 GCC5.3.1", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-mniS07/anat/sub-mniS07_space-other_T1w.json b/derivatives/data_preprocessed/sub-mniS07/anat/sub-mniS07_space-other_T1w.json index c35fc30039..debe833091 100644 --- a/derivatives/data_preprocessed/sub-mniS07/anat/sub-mniS07_space-other_T1w.json +++ b/derivatives/data_preprocessed/sub-mniS07/anat/sub-mniS07_space-other_T1w.json @@ -1,66 +1,79 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma_fit", - "InstitutionName": "Mc_Connell_Brain_Imaging_Centre", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "University_Street_3801_Montreal_District_CA_H3A_2B4", - "DeviceSerialNumber": "167017", - "StationName": "MRC35056", - "BodyPartExamined": "BRAIN", - "PatientPosition": "HFS", - "ProcedureStepDescription": "Functional_Dr._Doyon", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "T1w", - "ProtocolName": "T1w", - "ScanningSequence": "GR_IR", - "SequenceVariant": "SK_SP_MP", - "ScanOptions": "IR", - "SequenceName": "_tfl3d1_16", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS3D", "DIS2D"], - "SeriesNumber": 2, - "AcquisitionTime": "09:37:13.255000", - "AcquisitionNumber": 1, - "SliceThickness": 1, - "SAR": 0.0760591, - "EchoTime": 0.00372, - "RepetitionTime": 2, - "InversionTime": 1, - "FlipAngle": 9, - "PartialFourier": 1, - "BaseResolution": 320, - "ShimSetting": [ - 326, - -11589, - -6664, - 57, - 16, - 3, - -26, - 6 ], - "TxRefAmp": 305.661, - "PhaseResolution": 1, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC1-7;NC1,2", - "PulseSequenceDetails": "%SiemensSeq%_tfl", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 81.25, - "PhaseEncodingSteps": 259, - "AcquisitionMatrixPE": 260, - "ReconMatrixPE": 320, - "ParallelReductionFactorInPlane": 2, - "PixelBandwidth": 150, - "DwellTime": 1.04e-05, - "ImageOrientationPatientDICOM": [ - 0, - 1, - 0, - 0, - 0, - -1 ], - "InPlanePhaseEncodingDirectionDICOM": "ROW", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 GCC5.3.1" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma_fit", + "InstitutionName": "Mc_Connell_Brain_Imaging_Centre", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "University_Street_3801_Montreal_District_CA_H3A_2B4", + "DeviceSerialNumber": "167017", + "StationName": "MRC35056", + "BodyPartExamined": "BRAIN", + "PatientPosition": "HFS", + "ProcedureStepDescription": "Functional_Dr._Doyon", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "T1w", + "ProtocolName": "T1w", + "ScanningSequence": "GR_IR", + "SequenceVariant": "SK_SP_MP", + "ScanOptions": "IR", + "SequenceName": "_tfl3d1_16", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS3D", + "DIS2D" + ], + "SeriesNumber": 2, + "AcquisitionTime": "09:37:13.255000", + "AcquisitionNumber": 1, + "SliceThickness": 1, + "SAR": 0.0760591, + "EchoTime": 0.00372, + "RepetitionTime": 2, + "InversionTime": 1, + "FlipAngle": 9, + "PartialFourier": 1, + "BaseResolution": 320, + "ShimSetting": [ + 326, + -11589, + -6664, + 57, + 16, + 3, + -26, + 6 + ], + "TxRefAmp": 305.661, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC1-7;NC1,2", + "PulseSequenceDetails": "%SiemensSeq%_tfl", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 81.25, + "PhaseEncodingSteps": 259, + "AcquisitionMatrixPE": 260, + "ReconMatrixPE": 320, + "ParallelReductionFactorInPlane": 2, + "PixelBandwidth": 150, + "DwellTime": 1.04e-05, + "ImageOrientationPatientDICOM": [ + 0, + 1, + 0, + 0, + 0, + -1 + ], + "InPlanePhaseEncodingDirectionDICOM": "ROW", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 GCC5.3.1", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-mniS07/anat/sub-mniS07_space-other_T2star.json b/derivatives/data_preprocessed/sub-mniS07/anat/sub-mniS07_space-other_T2star.json index 316d59a9be..055fe39b5f 100644 --- a/derivatives/data_preprocessed/sub-mniS07/anat/sub-mniS07_space-other_T2star.json +++ b/derivatives/data_preprocessed/sub-mniS07/anat/sub-mniS07_space-other_T2star.json @@ -73,5 +73,9 @@ "InPlanePhaseEncodingDirectionDICOM": "COL", "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20180622 GCC5.3.1", - "AcquisitionDuration": 285.0 + "AcquisitionDuration": 285.0, + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-mniS07/anat/sub-mniS07_space-other_T2w.json b/derivatives/data_preprocessed/sub-mniS07/anat/sub-mniS07_space-other_T2w.json index 1789a0685c..efedfd7751 100644 --- a/derivatives/data_preprocessed/sub-mniS07/anat/sub-mniS07_space-other_T2w.json +++ b/derivatives/data_preprocessed/sub-mniS07/anat/sub-mniS07_space-other_T2w.json @@ -1,67 +1,80 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma_fit", - "InstitutionName": "Mc_Connell_Brain_Imaging_Centre", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "University_Street_3801_Montreal_District_CA_H3A_2B4", - "DeviceSerialNumber": "167017", - "StationName": "MRC35056", - "BodyPartExamined": "BRAIN", - "PatientPosition": "HFS", - "ProcedureStepDescription": "Functional_Dr._Doyon", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "T2w", - "ProtocolName": "T2w", - "ScanningSequence": "SE", - "SequenceVariant": "SK_SP_OSP", - "ScanOptions": "PFP", - "SequenceName": "_spcR_100", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS3D", "DIS2D"], - "SeriesNumber": 4, - "AcquisitionTime": "09:43:6.017500", - "AcquisitionNumber": 1, - "SliceThickness": 0.8, - "SAR": 0.605876, - "EchoTime": 0.12, - "RepetitionTime": 1.5, - "FlipAngle": 120, - "PartialFourier": 1, - "BaseResolution": 320, - "ShimSetting": [ - 326, - -11589, - -6664, - 57, - 16, - 3, - -26, - 6 ], - "TxRefAmp": 313.175, - "PhaseResolution": 1, - "PhaseOversampling": 0.8, - "ReceiveCoilName": "Spine_32", - "ReceiveCoilActiveElements": "HC5-7;NC1,2;SP1", - "PulseSequenceDetails": "%SiemensSeq%_tse_vfl", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 100, - "EchoTrainLength": 76, - "PhaseEncodingSteps": 422, - "AcquisitionMatrixPE": 320, - "ReconMatrixPE": 320, - "ParallelReductionFactorInPlane": 3, - "PixelBandwidth": 625, - "DwellTime": 2.5e-06, - "ImageOrientationPatientDICOM": [ - 0, - 1, - 4.897e-12, - 0, - 4.897e-12, - -1 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 GCC5.3.1" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma_fit", + "InstitutionName": "Mc_Connell_Brain_Imaging_Centre", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "University_Street_3801_Montreal_District_CA_H3A_2B4", + "DeviceSerialNumber": "167017", + "StationName": "MRC35056", + "BodyPartExamined": "BRAIN", + "PatientPosition": "HFS", + "ProcedureStepDescription": "Functional_Dr._Doyon", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "T2w", + "ProtocolName": "T2w", + "ScanningSequence": "SE", + "SequenceVariant": "SK_SP_OSP", + "ScanOptions": "PFP", + "SequenceName": "_spcR_100", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS3D", + "DIS2D" + ], + "SeriesNumber": 4, + "AcquisitionTime": "09:43:6.017500", + "AcquisitionNumber": 1, + "SliceThickness": 0.8, + "SAR": 0.605876, + "EchoTime": 0.12, + "RepetitionTime": 1.5, + "FlipAngle": 120, + "PartialFourier": 1, + "BaseResolution": 320, + "ShimSetting": [ + 326, + -11589, + -6664, + 57, + 16, + 3, + -26, + 6 + ], + "TxRefAmp": 313.175, + "PhaseResolution": 1, + "PhaseOversampling": 0.8, + "ReceiveCoilName": "Spine_32", + "ReceiveCoilActiveElements": "HC5-7;NC1,2;SP1", + "PulseSequenceDetails": "%SiemensSeq%_tse_vfl", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "EchoTrainLength": 76, + "PhaseEncodingSteps": 422, + "AcquisitionMatrixPE": 320, + "ReconMatrixPE": 320, + "ParallelReductionFactorInPlane": 3, + "PixelBandwidth": 625, + "DwellTime": 2.5e-06, + "ImageOrientationPatientDICOM": [ + 0, + 1, + 4.897e-12, + 0, + 4.897e-12, + -1 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 GCC5.3.1", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-mniS08/anat/sub-mniS08_flip-1_mt-on_space-other_MTS.json b/derivatives/data_preprocessed/sub-mniS08/anat/sub-mniS08_flip-1_mt-on_space-other_MTS.json index 939e3d0faa..6a14021b83 100644 --- a/derivatives/data_preprocessed/sub-mniS08/anat/sub-mniS08_flip-1_mt-on_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-mniS08/anat/sub-mniS08_flip-1_mt-on_space-other_MTS.json @@ -1,65 +1,76 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma_fit", - "InstitutionName": "Mc_Connell_Brain_Imaging_Centre", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "University_Street_3801_Montreal_District_CA_H3A_2B4", - "DeviceSerialNumber": "167017", - "StationName": "MRC35056", - "BodyPartExamined": "BRAIN", - "PatientPosition": "HFS", - "ProcedureStepDescription": "Functional_Dr._Doyon", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-MT1", - "ProtocolName": "GRE-MT1", - "ScanningSequence": "GR", - "SequenceVariant": "MTC_SP", - "ScanOptions": "MT", - "SequenceName": "_fl3d1", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS2D"], - "SeriesNumber": 7, - "AcquisitionTime": "09:22:34.935000", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SAR": 0.470542, - "EchoTime": 0.00313, - "RepetitionTime": 0.035, - "FlipAngle": 9, - "PartialFourier": 1, - "BaseResolution": 256, - "ShimSetting": [ - 291, - -11596, - -6521, - -2126, - -47, - 2756, - -594, - -43 ], - "TxRefAmp": 274.967, - "PhaseResolution": 1, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC7;NC1,2", - "PulseSequenceDetails": "%SiemensSeq%_gre", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 100, - "PhaseEncodingSteps": 255, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 256, - "ParallelReductionFactorInPlane": 2, - "PixelBandwidth": 260, - "DwellTime": 7.5e-06, - "ImageOrientationPatientDICOM": [ - 1, - 0, - 0, - 0, - 0.99863, - 0.052336 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 GCC5.3.1" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma_fit", + "InstitutionName": "Mc_Connell_Brain_Imaging_Centre", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "University_Street_3801_Montreal_District_CA_H3A_2B4", + "DeviceSerialNumber": "167017", + "StationName": "MRC35056", + "BodyPartExamined": "BRAIN", + "PatientPosition": "HFS", + "ProcedureStepDescription": "Functional_Dr._Doyon", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-MT1", + "ProtocolName": "GRE-MT1", + "ScanningSequence": "GR", + "SequenceVariant": "MTC_SP", + "ScanOptions": "MT", + "SequenceName": "_fl3d1", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS2D" + ], + "SeriesNumber": 7, + "AcquisitionTime": "09:22:34.935000", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SAR": 0.470542, + "EchoTime": 0.00313, + "RepetitionTime": 0.035, + "FlipAngle": 9, + "PartialFourier": 1, + "BaseResolution": 256, + "ShimSetting": [ + 291, + -11596, + -6521, + -2126, + -47, + 2756, + -594, + -43 + ], + "TxRefAmp": 274.967, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC7;NC1,2", + "PulseSequenceDetails": "%SiemensSeq%_gre", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 255, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "ParallelReductionFactorInPlane": 2, + "PixelBandwidth": 260, + "DwellTime": 7.5e-06, + "ImageOrientationPatientDICOM": [ + 1, + 0, + 0, + 0, + 0.99863, + 0.052336 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 GCC5.3.1", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-mniS08/anat/sub-mniS08_flip-2_mt-off_space-other_MTS.json b/derivatives/data_preprocessed/sub-mniS08/anat/sub-mniS08_flip-2_mt-off_space-other_MTS.json index 5d359e6335..ee60975ab3 100644 --- a/derivatives/data_preprocessed/sub-mniS08/anat/sub-mniS08_flip-2_mt-off_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-mniS08/anat/sub-mniS08_flip-2_mt-off_space-other_MTS.json @@ -1,64 +1,75 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma_fit", - "InstitutionName": "Mc_Connell_Brain_Imaging_Centre", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "University_Street_3801_Montreal_District_CA_H3A_2B4", - "DeviceSerialNumber": "167017", - "StationName": "MRC35056", - "BodyPartExamined": "BRAIN", - "PatientPosition": "HFS", - "ProcedureStepDescription": "Functional_Dr._Doyon", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-T1w", - "ProtocolName": "GRE-T1w", - "ScanningSequence": "GR", - "SequenceVariant": "SP", - "SequenceName": "_fl3d1", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS2D"], - "SeriesNumber": 11, - "AcquisitionTime": "09:27:0.985000", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SAR": 0.0305085, - "EchoTime": 0.00313, - "RepetitionTime": 0.015, - "FlipAngle": 15, - "PartialFourier": 1, - "BaseResolution": 256, - "ShimSetting": [ - 291, - -11596, - -6521, - -2126, - -47, - 2756, - -594, - -43 ], - "TxRefAmp": 274.967, - "PhaseResolution": 1, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC7;NC1,2", - "PulseSequenceDetails": "%SiemensSeq%_gre", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 100, - "PhaseEncodingSteps": 255, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 256, - "ParallelReductionFactorInPlane": 2, - "PixelBandwidth": 260, - "DwellTime": 7.5e-06, - "ImageOrientationPatientDICOM": [ - 1, - 0, - 0, - 0, - 0.99863, - 0.052336 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 GCC5.3.1" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma_fit", + "InstitutionName": "Mc_Connell_Brain_Imaging_Centre", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "University_Street_3801_Montreal_District_CA_H3A_2B4", + "DeviceSerialNumber": "167017", + "StationName": "MRC35056", + "BodyPartExamined": "BRAIN", + "PatientPosition": "HFS", + "ProcedureStepDescription": "Functional_Dr._Doyon", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-T1w", + "ProtocolName": "GRE-T1w", + "ScanningSequence": "GR", + "SequenceVariant": "SP", + "SequenceName": "_fl3d1", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS2D" + ], + "SeriesNumber": 11, + "AcquisitionTime": "09:27:0.985000", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SAR": 0.0305085, + "EchoTime": 0.00313, + "RepetitionTime": 0.015, + "FlipAngle": 15, + "PartialFourier": 1, + "BaseResolution": 256, + "ShimSetting": [ + 291, + -11596, + -6521, + -2126, + -47, + 2756, + -594, + -43 + ], + "TxRefAmp": 274.967, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC7;NC1,2", + "PulseSequenceDetails": "%SiemensSeq%_gre", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 255, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "ParallelReductionFactorInPlane": 2, + "PixelBandwidth": 260, + "DwellTime": 7.5e-06, + "ImageOrientationPatientDICOM": [ + 1, + 0, + 0, + 0, + 0.99863, + 0.052336 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 GCC5.3.1", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-mniS08/anat/sub-mniS08_space-other_T1w.json b/derivatives/data_preprocessed/sub-mniS08/anat/sub-mniS08_space-other_T1w.json index c7f9aacc9a..d5a762beca 100644 --- a/derivatives/data_preprocessed/sub-mniS08/anat/sub-mniS08_space-other_T1w.json +++ b/derivatives/data_preprocessed/sub-mniS08/anat/sub-mniS08_space-other_T1w.json @@ -1,66 +1,79 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma_fit", - "InstitutionName": "Mc_Connell_Brain_Imaging_Centre", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "University_Street_3801_Montreal_District_CA_H3A_2B4", - "DeviceSerialNumber": "167017", - "StationName": "MRC35056", - "BodyPartExamined": "BRAIN", - "PatientPosition": "HFS", - "ProcedureStepDescription": "Functional_Dr._Doyon", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "T1w", - "ProtocolName": "T1w", - "ScanningSequence": "GR_IR", - "SequenceVariant": "SK_SP_MP", - "ScanOptions": "IR", - "SequenceName": "_tfl3d1_16", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS3D", "DIS2D"], - "SeriesNumber": 2, - "AcquisitionTime": "09:08:21.687500", - "AcquisitionNumber": 1, - "SliceThickness": 1, - "SAR": 0.0518808, - "EchoTime": 0.00372, - "RepetitionTime": 2, - "InversionTime": 1, - "FlipAngle": 9, - "PartialFourier": 1, - "BaseResolution": 320, - "ShimSetting": [ - 326, - -11589, - -6664, - 57, - 16, - 3, - -26, - 6 ], - "TxRefAmp": 253.955, - "PhaseResolution": 1, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC1-7;NC1,2", - "PulseSequenceDetails": "%SiemensSeq%_tfl", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 81.25, - "PhaseEncodingSteps": 259, - "AcquisitionMatrixPE": 260, - "ReconMatrixPE": 320, - "ParallelReductionFactorInPlane": 2, - "PixelBandwidth": 150, - "DwellTime": 1.04e-05, - "ImageOrientationPatientDICOM": [ - 0, - 1, - 0, - 0, - 0, - -1 ], - "InPlanePhaseEncodingDirectionDICOM": "ROW", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 GCC5.3.1" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma_fit", + "InstitutionName": "Mc_Connell_Brain_Imaging_Centre", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "University_Street_3801_Montreal_District_CA_H3A_2B4", + "DeviceSerialNumber": "167017", + "StationName": "MRC35056", + "BodyPartExamined": "BRAIN", + "PatientPosition": "HFS", + "ProcedureStepDescription": "Functional_Dr._Doyon", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "T1w", + "ProtocolName": "T1w", + "ScanningSequence": "GR_IR", + "SequenceVariant": "SK_SP_MP", + "ScanOptions": "IR", + "SequenceName": "_tfl3d1_16", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS3D", + "DIS2D" + ], + "SeriesNumber": 2, + "AcquisitionTime": "09:08:21.687500", + "AcquisitionNumber": 1, + "SliceThickness": 1, + "SAR": 0.0518808, + "EchoTime": 0.00372, + "RepetitionTime": 2, + "InversionTime": 1, + "FlipAngle": 9, + "PartialFourier": 1, + "BaseResolution": 320, + "ShimSetting": [ + 326, + -11589, + -6664, + 57, + 16, + 3, + -26, + 6 + ], + "TxRefAmp": 253.955, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC1-7;NC1,2", + "PulseSequenceDetails": "%SiemensSeq%_tfl", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 81.25, + "PhaseEncodingSteps": 259, + "AcquisitionMatrixPE": 260, + "ReconMatrixPE": 320, + "ParallelReductionFactorInPlane": 2, + "PixelBandwidth": 150, + "DwellTime": 1.04e-05, + "ImageOrientationPatientDICOM": [ + 0, + 1, + 0, + 0, + 0, + -1 + ], + "InPlanePhaseEncodingDirectionDICOM": "ROW", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 GCC5.3.1", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-mniS08/anat/sub-mniS08_space-other_T2star.json b/derivatives/data_preprocessed/sub-mniS08/anat/sub-mniS08_space-other_T2star.json index be98816080..45d2ef531e 100644 --- a/derivatives/data_preprocessed/sub-mniS08/anat/sub-mniS08_space-other_T2star.json +++ b/derivatives/data_preprocessed/sub-mniS08/anat/sub-mniS08_space-other_T2star.json @@ -73,5 +73,9 @@ "InPlanePhaseEncodingDirectionDICOM": "COL", "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20180622 GCC5.3.1", - "AcquisitionDuration": 285.0 + "AcquisitionDuration": 285.0, + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-mniS08/anat/sub-mniS08_space-other_T2w.json b/derivatives/data_preprocessed/sub-mniS08/anat/sub-mniS08_space-other_T2w.json index a6052171c5..a35212ba71 100644 --- a/derivatives/data_preprocessed/sub-mniS08/anat/sub-mniS08_space-other_T2w.json +++ b/derivatives/data_preprocessed/sub-mniS08/anat/sub-mniS08_space-other_T2w.json @@ -1,67 +1,80 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma_fit", - "InstitutionName": "Mc_Connell_Brain_Imaging_Centre", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "University_Street_3801_Montreal_District_CA_H3A_2B4", - "DeviceSerialNumber": "167017", - "StationName": "MRC35056", - "BodyPartExamined": "BRAIN", - "PatientPosition": "HFS", - "ProcedureStepDescription": "Functional_Dr._Doyon", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "T2w", - "ProtocolName": "T2w", - "ScanningSequence": "SE", - "SequenceVariant": "SK_SP_OSP", - "ScanOptions": "PFP", - "SequenceName": "_spcR_100", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS3D", "DIS2D"], - "SeriesNumber": 4, - "AcquisitionTime": "09:13:55.692500", - "AcquisitionNumber": 1, - "SliceThickness": 0.8, - "SAR": 0.477023, - "EchoTime": 0.12, - "RepetitionTime": 1.5, - "FlipAngle": 120, - "PartialFourier": 1, - "BaseResolution": 320, - "ShimSetting": [ - 326, - -11589, - -6664, - 57, - 16, - 3, - -26, - 6 ], - "TxRefAmp": 275.526, - "PhaseResolution": 1, - "PhaseOversampling": 0.8, - "ReceiveCoilName": "Spine_32", - "ReceiveCoilActiveElements": "HC5-7;NC1,2;SP1", - "PulseSequenceDetails": "%SiemensSeq%_tse_vfl", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 100, - "EchoTrainLength": 76, - "PhaseEncodingSteps": 422, - "AcquisitionMatrixPE": 320, - "ReconMatrixPE": 320, - "ParallelReductionFactorInPlane": 3, - "PixelBandwidth": 625, - "DwellTime": 2.5e-06, - "ImageOrientationPatientDICOM": [ - 0, - 1, - 4.897e-12, - 0, - 4.897e-12, - -1 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 GCC5.3.1" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma_fit", + "InstitutionName": "Mc_Connell_Brain_Imaging_Centre", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "University_Street_3801_Montreal_District_CA_H3A_2B4", + "DeviceSerialNumber": "167017", + "StationName": "MRC35056", + "BodyPartExamined": "BRAIN", + "PatientPosition": "HFS", + "ProcedureStepDescription": "Functional_Dr._Doyon", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "T2w", + "ProtocolName": "T2w", + "ScanningSequence": "SE", + "SequenceVariant": "SK_SP_OSP", + "ScanOptions": "PFP", + "SequenceName": "_spcR_100", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS3D", + "DIS2D" + ], + "SeriesNumber": 4, + "AcquisitionTime": "09:13:55.692500", + "AcquisitionNumber": 1, + "SliceThickness": 0.8, + "SAR": 0.477023, + "EchoTime": 0.12, + "RepetitionTime": 1.5, + "FlipAngle": 120, + "PartialFourier": 1, + "BaseResolution": 320, + "ShimSetting": [ + 326, + -11589, + -6664, + 57, + 16, + 3, + -26, + 6 + ], + "TxRefAmp": 275.526, + "PhaseResolution": 1, + "PhaseOversampling": 0.8, + "ReceiveCoilName": "Spine_32", + "ReceiveCoilActiveElements": "HC5-7;NC1,2;SP1", + "PulseSequenceDetails": "%SiemensSeq%_tse_vfl", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "EchoTrainLength": 76, + "PhaseEncodingSteps": 422, + "AcquisitionMatrixPE": 320, + "ReconMatrixPE": 320, + "ParallelReductionFactorInPlane": 3, + "PixelBandwidth": 625, + "DwellTime": 2.5e-06, + "ImageOrientationPatientDICOM": [ + 0, + 1, + 4.897e-12, + 0, + 4.897e-12, + -1 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 GCC5.3.1", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-mniS09/anat/sub-mniS09_flip-1_mt-on_space-other_MTS.json b/derivatives/data_preprocessed/sub-mniS09/anat/sub-mniS09_flip-1_mt-on_space-other_MTS.json index 2199b5cac1..78325acc4d 100644 --- a/derivatives/data_preprocessed/sub-mniS09/anat/sub-mniS09_flip-1_mt-on_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-mniS09/anat/sub-mniS09_flip-1_mt-on_space-other_MTS.json @@ -1,65 +1,76 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma_fit", - "InstitutionName": "Mc_Connell_Brain_Imaging_Centre", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "University_Street_3801_Montreal_District_CA_H3A_2B4", - "DeviceSerialNumber": "167017", - "StationName": "MRC35056", - "BodyPartExamined": "BRAIN", - "PatientPosition": "HFS", - "ProcedureStepDescription": "Functional_Dr._Doyon", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-MT1", - "ProtocolName": "GRE-MT1", - "ScanningSequence": "GR", - "SequenceVariant": "MTC_SP", - "ScanOptions": "MT", - "SequenceName": "_fl3d1", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS2D"], - "SeriesNumber": 8, - "AcquisitionTime": "10:37:41.420000", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SAR": 0.584003, - "EchoTime": 0.00313, - "RepetitionTime": 0.035, - "FlipAngle": 9, - "PartialFourier": 1, - "BaseResolution": 256, - "ShimSetting": [ - 345, - -11681, - -6634, - -1370, - 137, - 2544, - -931, - 21 ], - "TxRefAmp": 278.07, - "PhaseResolution": 1, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC5-7;NC1,2", - "PulseSequenceDetails": "%SiemensSeq%_gre", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 100, - "PhaseEncodingSteps": 255, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 256, - "ParallelReductionFactorInPlane": 2, - "PixelBandwidth": 260, - "DwellTime": 7.5e-06, - "ImageOrientationPatientDICOM": [ - 1, - 0, - 0, - 0, - 0.994522, - 0.104528 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 GCC5.3.1" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma_fit", + "InstitutionName": "Mc_Connell_Brain_Imaging_Centre", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "University_Street_3801_Montreal_District_CA_H3A_2B4", + "DeviceSerialNumber": "167017", + "StationName": "MRC35056", + "BodyPartExamined": "BRAIN", + "PatientPosition": "HFS", + "ProcedureStepDescription": "Functional_Dr._Doyon", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-MT1", + "ProtocolName": "GRE-MT1", + "ScanningSequence": "GR", + "SequenceVariant": "MTC_SP", + "ScanOptions": "MT", + "SequenceName": "_fl3d1", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS2D" + ], + "SeriesNumber": 8, + "AcquisitionTime": "10:37:41.420000", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SAR": 0.584003, + "EchoTime": 0.00313, + "RepetitionTime": 0.035, + "FlipAngle": 9, + "PartialFourier": 1, + "BaseResolution": 256, + "ShimSetting": [ + 345, + -11681, + -6634, + -1370, + 137, + 2544, + -931, + 21 + ], + "TxRefAmp": 278.07, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC5-7;NC1,2", + "PulseSequenceDetails": "%SiemensSeq%_gre", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 255, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "ParallelReductionFactorInPlane": 2, + "PixelBandwidth": 260, + "DwellTime": 7.5e-06, + "ImageOrientationPatientDICOM": [ + 1, + 0, + 0, + 0, + 0.994522, + 0.104528 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 GCC5.3.1", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-mniS09/anat/sub-mniS09_flip-2_mt-off_space-other_MTS.json b/derivatives/data_preprocessed/sub-mniS09/anat/sub-mniS09_flip-2_mt-off_space-other_MTS.json index 996509dd20..9ab381f217 100644 --- a/derivatives/data_preprocessed/sub-mniS09/anat/sub-mniS09_flip-2_mt-off_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-mniS09/anat/sub-mniS09_flip-2_mt-off_space-other_MTS.json @@ -1,64 +1,75 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma_fit", - "InstitutionName": "Mc_Connell_Brain_Imaging_Centre", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "University_Street_3801_Montreal_District_CA_H3A_2B4", - "DeviceSerialNumber": "167017", - "StationName": "MRC35056", - "BodyPartExamined": "BRAIN", - "PatientPosition": "HFS", - "ProcedureStepDescription": "Functional_Dr._Doyon", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-T1w", - "ProtocolName": "GRE-T1w", - "ScanningSequence": "GR", - "SequenceVariant": "SP", - "SequenceName": "_fl3d1", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS2D"], - "SeriesNumber": 12, - "AcquisitionTime": "10:42:6.952500", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SAR": 0.037865, - "EchoTime": 0.00313, - "RepetitionTime": 0.015, - "FlipAngle": 15, - "PartialFourier": 1, - "BaseResolution": 256, - "ShimSetting": [ - 345, - -11681, - -6634, - -1370, - 137, - 2544, - -931, - 21 ], - "TxRefAmp": 278.07, - "PhaseResolution": 1, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC5-7;NC1,2", - "PulseSequenceDetails": "%SiemensSeq%_gre", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 100, - "PhaseEncodingSteps": 255, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 256, - "ParallelReductionFactorInPlane": 2, - "PixelBandwidth": 260, - "DwellTime": 7.5e-06, - "ImageOrientationPatientDICOM": [ - 1, - 0, - 0, - 0, - 0.994522, - 0.104528 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 GCC5.3.1" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma_fit", + "InstitutionName": "Mc_Connell_Brain_Imaging_Centre", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "University_Street_3801_Montreal_District_CA_H3A_2B4", + "DeviceSerialNumber": "167017", + "StationName": "MRC35056", + "BodyPartExamined": "BRAIN", + "PatientPosition": "HFS", + "ProcedureStepDescription": "Functional_Dr._Doyon", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-T1w", + "ProtocolName": "GRE-T1w", + "ScanningSequence": "GR", + "SequenceVariant": "SP", + "SequenceName": "_fl3d1", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS2D" + ], + "SeriesNumber": 12, + "AcquisitionTime": "10:42:6.952500", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SAR": 0.037865, + "EchoTime": 0.00313, + "RepetitionTime": 0.015, + "FlipAngle": 15, + "PartialFourier": 1, + "BaseResolution": 256, + "ShimSetting": [ + 345, + -11681, + -6634, + -1370, + 137, + 2544, + -931, + 21 + ], + "TxRefAmp": 278.07, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC5-7;NC1,2", + "PulseSequenceDetails": "%SiemensSeq%_gre", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 255, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "ParallelReductionFactorInPlane": 2, + "PixelBandwidth": 260, + "DwellTime": 7.5e-06, + "ImageOrientationPatientDICOM": [ + 1, + 0, + 0, + 0, + 0.994522, + 0.104528 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 GCC5.3.1", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-mniS09/anat/sub-mniS09_space-other_T1w.json b/derivatives/data_preprocessed/sub-mniS09/anat/sub-mniS09_space-other_T1w.json index d9b85def2d..c9c071676f 100644 --- a/derivatives/data_preprocessed/sub-mniS09/anat/sub-mniS09_space-other_T1w.json +++ b/derivatives/data_preprocessed/sub-mniS09/anat/sub-mniS09_space-other_T1w.json @@ -1,66 +1,79 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma_fit", - "InstitutionName": "Mc_Connell_Brain_Imaging_Centre", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "University_Street_3801_Montreal_District_CA_H3A_2B4", - "DeviceSerialNumber": "167017", - "StationName": "MRC35056", - "BodyPartExamined": "BRAIN", - "PatientPosition": "HFS", - "ProcedureStepDescription": "Functional_Dr._Doyon", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "T1w", - "ProtocolName": "T1w", - "ScanningSequence": "GR_IR", - "SequenceVariant": "SK_SP_MP", - "ScanOptions": "IR", - "SequenceName": "_tfl3d1_16", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS3D", "DIS2D"], - "SeriesNumber": 3, - "AcquisitionTime": "10:19:4.007500", - "AcquisitionNumber": 1, - "SliceThickness": 1, - "SAR": 0.0716462, - "EchoTime": 0.00372, - "RepetitionTime": 2, - "InversionTime": 1, - "FlipAngle": 9, - "PartialFourier": 1, - "BaseResolution": 320, - "ShimSetting": [ - 326, - -11589, - -6664, - 57, - 16, - 3, - -26, - 6 ], - "TxRefAmp": 267.584, - "PhaseResolution": 1, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC1-7;NC1,2", - "PulseSequenceDetails": "%SiemensSeq%_tfl", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 81.25, - "PhaseEncodingSteps": 259, - "AcquisitionMatrixPE": 260, - "ReconMatrixPE": 320, - "ParallelReductionFactorInPlane": 2, - "PixelBandwidth": 150, - "DwellTime": 1.04e-05, - "ImageOrientationPatientDICOM": [ - 0, - 1, - 0, - 0, - 0, - -1 ], - "InPlanePhaseEncodingDirectionDICOM": "ROW", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 GCC5.3.1" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma_fit", + "InstitutionName": "Mc_Connell_Brain_Imaging_Centre", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "University_Street_3801_Montreal_District_CA_H3A_2B4", + "DeviceSerialNumber": "167017", + "StationName": "MRC35056", + "BodyPartExamined": "BRAIN", + "PatientPosition": "HFS", + "ProcedureStepDescription": "Functional_Dr._Doyon", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "T1w", + "ProtocolName": "T1w", + "ScanningSequence": "GR_IR", + "SequenceVariant": "SK_SP_MP", + "ScanOptions": "IR", + "SequenceName": "_tfl3d1_16", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS3D", + "DIS2D" + ], + "SeriesNumber": 3, + "AcquisitionTime": "10:19:4.007500", + "AcquisitionNumber": 1, + "SliceThickness": 1, + "SAR": 0.0716462, + "EchoTime": 0.00372, + "RepetitionTime": 2, + "InversionTime": 1, + "FlipAngle": 9, + "PartialFourier": 1, + "BaseResolution": 320, + "ShimSetting": [ + 326, + -11589, + -6664, + 57, + 16, + 3, + -26, + 6 + ], + "TxRefAmp": 267.584, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC1-7;NC1,2", + "PulseSequenceDetails": "%SiemensSeq%_tfl", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 81.25, + "PhaseEncodingSteps": 259, + "AcquisitionMatrixPE": 260, + "ReconMatrixPE": 320, + "ParallelReductionFactorInPlane": 2, + "PixelBandwidth": 150, + "DwellTime": 1.04e-05, + "ImageOrientationPatientDICOM": [ + 0, + 1, + 0, + 0, + 0, + -1 + ], + "InPlanePhaseEncodingDirectionDICOM": "ROW", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 GCC5.3.1", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-mniS09/anat/sub-mniS09_space-other_T2star.json b/derivatives/data_preprocessed/sub-mniS09/anat/sub-mniS09_space-other_T2star.json index a51eb73b61..a6ccecb21f 100644 --- a/derivatives/data_preprocessed/sub-mniS09/anat/sub-mniS09_space-other_T2star.json +++ b/derivatives/data_preprocessed/sub-mniS09/anat/sub-mniS09_space-other_T2star.json @@ -73,5 +73,9 @@ "InPlanePhaseEncodingDirectionDICOM": "COL", "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20180622 GCC5.3.1", - "AcquisitionDuration": 285.0 + "AcquisitionDuration": 285.0, + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-mniS09/anat/sub-mniS09_space-other_T2w.json b/derivatives/data_preprocessed/sub-mniS09/anat/sub-mniS09_space-other_T2w.json index 447c5ce225..dcbfc287a8 100644 --- a/derivatives/data_preprocessed/sub-mniS09/anat/sub-mniS09_space-other_T2w.json +++ b/derivatives/data_preprocessed/sub-mniS09/anat/sub-mniS09_space-other_T2w.json @@ -1,67 +1,80 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma_fit", - "InstitutionName": "Mc_Connell_Brain_Imaging_Centre", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "University_Street_3801_Montreal_District_CA_H3A_2B4", - "DeviceSerialNumber": "167017", - "StationName": "MRC35056", - "BodyPartExamined": "BRAIN", - "PatientPosition": "HFS", - "ProcedureStepDescription": "Functional_Dr._Doyon", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "T2w", - "ProtocolName": "T2w", - "ScanningSequence": "SE", - "SequenceVariant": "SK_SP_OSP", - "ScanOptions": "PFP", - "SequenceName": "_spcR_100", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS3D", "DIS2D"], - "SeriesNumber": 5, - "AcquisitionTime": "10:26:39.002500", - "AcquisitionNumber": 1, - "SliceThickness": 0.8, - "SAR": 0.640244, - "EchoTime": 0.12, - "RepetitionTime": 1.5, - "FlipAngle": 120, - "PartialFourier": 1, - "BaseResolution": 320, - "ShimSetting": [ - 326, - -11589, - -6664, - 57, - 16, - 3, - -26, - 6 ], - "TxRefAmp": 287.209, - "PhaseResolution": 1, - "PhaseOversampling": 0.8, - "ReceiveCoilName": "Spine_32", - "ReceiveCoilActiveElements": "HC5-7;NC1,2;SP1", - "PulseSequenceDetails": "%SiemensSeq%_tse_vfl", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 100, - "EchoTrainLength": 76, - "PhaseEncodingSteps": 422, - "AcquisitionMatrixPE": 320, - "ReconMatrixPE": 320, - "ParallelReductionFactorInPlane": 3, - "PixelBandwidth": 625, - "DwellTime": 2.5e-06, - "ImageOrientationPatientDICOM": [ - 0, - 1, - 4.897e-12, - 0, - 4.897e-12, - -1 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 GCC5.3.1" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma_fit", + "InstitutionName": "Mc_Connell_Brain_Imaging_Centre", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "University_Street_3801_Montreal_District_CA_H3A_2B4", + "DeviceSerialNumber": "167017", + "StationName": "MRC35056", + "BodyPartExamined": "BRAIN", + "PatientPosition": "HFS", + "ProcedureStepDescription": "Functional_Dr._Doyon", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "T2w", + "ProtocolName": "T2w", + "ScanningSequence": "SE", + "SequenceVariant": "SK_SP_OSP", + "ScanOptions": "PFP", + "SequenceName": "_spcR_100", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS3D", + "DIS2D" + ], + "SeriesNumber": 5, + "AcquisitionTime": "10:26:39.002500", + "AcquisitionNumber": 1, + "SliceThickness": 0.8, + "SAR": 0.640244, + "EchoTime": 0.12, + "RepetitionTime": 1.5, + "FlipAngle": 120, + "PartialFourier": 1, + "BaseResolution": 320, + "ShimSetting": [ + 326, + -11589, + -6664, + 57, + 16, + 3, + -26, + 6 + ], + "TxRefAmp": 287.209, + "PhaseResolution": 1, + "PhaseOversampling": 0.8, + "ReceiveCoilName": "Spine_32", + "ReceiveCoilActiveElements": "HC5-7;NC1,2;SP1", + "PulseSequenceDetails": "%SiemensSeq%_tse_vfl", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "EchoTrainLength": 76, + "PhaseEncodingSteps": 422, + "AcquisitionMatrixPE": 320, + "ReconMatrixPE": 320, + "ParallelReductionFactorInPlane": 3, + "PixelBandwidth": 625, + "DwellTime": 2.5e-06, + "ImageOrientationPatientDICOM": [ + 0, + 1, + 4.897e-12, + 0, + 4.897e-12, + -1 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 GCC5.3.1", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-mountSinai01/anat/sub-mountSinai01_flip-1_mt-on_space-other_MTS.json b/derivatives/data_preprocessed/sub-mountSinai01/anat/sub-mountSinai01_flip-1_mt-on_space-other_MTS.json index 3a88e6553c..c7c2153cdc 100644 --- a/derivatives/data_preprocessed/sub-mountSinai01/anat/sub-mountSinai01_flip-1_mt-on_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-mountSinai01/anat/sub-mountSinai01_flip-1_mt-on_space-other_MTS.json @@ -1,65 +1,76 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Skyra", - "InstitutionName": "MT_SINAI_MED_CTR_3T_SKYRA_RE_MR12", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "Madison_Avenue_1470_New_York_NYC_US_10029", - "DeviceSerialNumber": "45435", - "StationName": "AWP45435", - "BodyPartExamined": "CSPINE", - "PatientPosition": "HFS", - "ProcedureStepDescription": "RE_MRI_SPINE_CERVICAL_WITHOUT_CONTRAST", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-MT1", - "ProtocolName": "GRE-MT1", - "ScanningSequence": "GR", - "SequenceVariant": "MTC_SP", - "ScanOptions": "MT", - "SequenceName": "_fl3d1", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS2D"], - "SeriesNumber": 8, - "AcquisitionTime": "14:30:15.072500", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SAR": 0.719477, - "EchoTime": 0.00313, - "RepetitionTime": 0.035, - "FlipAngle": 9, - "PartialFourier": 1, - "BaseResolution": 256, - "ShimSetting": [ - 3138, - -11508, - 10306, - -1088, - 927, - 4999, - -170, - -74 ], - "TxRefAmp": 392.56, - "PhaseResolution": 1, - "ReceiveCoilName": "Spine_32", - "ReceiveCoilActiveElements": "HE3,4;NE1,2;SP1", - "PulseSequenceDetails": "%SiemensSeq%_gre", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 100, - "PhaseEncodingSteps": 255, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 256, - "ParallelReductionFactorInPlane": 2, - "PixelBandwidth": 260, - "DwellTime": 7.5e-06, - "ImageOrientationPatientDICOM": [ - 0.999825, - 0.00111634, - -0.0186748, - -8.58299e-09, - 0.998218, - 0.0596708 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20171215 GCC4.8.5" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Skyra", + "InstitutionName": "MT_SINAI_MED_CTR_3T_SKYRA_RE_MR12", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "Madison_Avenue_1470_New_York_NYC_US_10029", + "DeviceSerialNumber": "45435", + "StationName": "AWP45435", + "BodyPartExamined": "CSPINE", + "PatientPosition": "HFS", + "ProcedureStepDescription": "RE_MRI_SPINE_CERVICAL_WITHOUT_CONTRAST", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-MT1", + "ProtocolName": "GRE-MT1", + "ScanningSequence": "GR", + "SequenceVariant": "MTC_SP", + "ScanOptions": "MT", + "SequenceName": "_fl3d1", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS2D" + ], + "SeriesNumber": 8, + "AcquisitionTime": "14:30:15.072500", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SAR": 0.719477, + "EchoTime": 0.00313, + "RepetitionTime": 0.035, + "FlipAngle": 9, + "PartialFourier": 1, + "BaseResolution": 256, + "ShimSetting": [ + 3138, + -11508, + 10306, + -1088, + 927, + 4999, + -170, + -74 + ], + "TxRefAmp": 392.56, + "PhaseResolution": 1, + "ReceiveCoilName": "Spine_32", + "ReceiveCoilActiveElements": "HE3,4;NE1,2;SP1", + "PulseSequenceDetails": "%SiemensSeq%_gre", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 255, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "ParallelReductionFactorInPlane": 2, + "PixelBandwidth": 260, + "DwellTime": 7.5e-06, + "ImageOrientationPatientDICOM": [ + 0.999825, + 0.00111634, + -0.0186748, + -8.58299e-09, + 0.998218, + 0.0596708 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20171215 GCC4.8.5", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-mountSinai01/anat/sub-mountSinai01_flip-2_mt-off_space-other_MTS.json b/derivatives/data_preprocessed/sub-mountSinai01/anat/sub-mountSinai01_flip-2_mt-off_space-other_MTS.json index e594e9b585..2db1d5d388 100644 --- a/derivatives/data_preprocessed/sub-mountSinai01/anat/sub-mountSinai01_flip-2_mt-off_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-mountSinai01/anat/sub-mountSinai01_flip-2_mt-off_space-other_MTS.json @@ -1,64 +1,75 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Skyra", - "InstitutionName": "MT_SINAI_MED_CTR_3T_SKYRA_RE_MR12", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "Madison_Avenue_1470_New_York_NYC_US_10029", - "DeviceSerialNumber": "45435", - "StationName": "AWP45435", - "BodyPartExamined": "CSPINE", - "PatientPosition": "HFS", - "ProcedureStepDescription": "RE_MRI_SPINE_CERVICAL_WITHOUT_CONTRAST", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-T1w", - "ProtocolName": "GRE-T1w", - "ScanningSequence": "GR", - "SequenceVariant": "SP", - "SequenceName": "_fl3d1", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS2D"], - "SeriesNumber": 10, - "AcquisitionTime": "14:35:54.000000", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SAR": 0.0466487, - "EchoTime": 0.00313, - "RepetitionTime": 0.015, - "FlipAngle": 15, - "PartialFourier": 1, - "BaseResolution": 256, - "ShimSetting": [ - 3138, - -11508, - 10306, - -1088, - 927, - 4999, - -170, - -74 ], - "TxRefAmp": 392.56, - "PhaseResolution": 1, - "ReceiveCoilName": "Spine_32", - "ReceiveCoilActiveElements": "HE3,4;NE1,2;SP1", - "PulseSequenceDetails": "%SiemensSeq%_gre", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 100, - "PhaseEncodingSteps": 255, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 256, - "ParallelReductionFactorInPlane": 2, - "PixelBandwidth": 260, - "DwellTime": 7.5e-06, - "ImageOrientationPatientDICOM": [ - 0.999825, - 0.00111634, - -0.0186748, - -8.58299e-09, - 0.998218, - 0.0596708 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20171215 GCC4.8.5" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Skyra", + "InstitutionName": "MT_SINAI_MED_CTR_3T_SKYRA_RE_MR12", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "Madison_Avenue_1470_New_York_NYC_US_10029", + "DeviceSerialNumber": "45435", + "StationName": "AWP45435", + "BodyPartExamined": "CSPINE", + "PatientPosition": "HFS", + "ProcedureStepDescription": "RE_MRI_SPINE_CERVICAL_WITHOUT_CONTRAST", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-T1w", + "ProtocolName": "GRE-T1w", + "ScanningSequence": "GR", + "SequenceVariant": "SP", + "SequenceName": "_fl3d1", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS2D" + ], + "SeriesNumber": 10, + "AcquisitionTime": "14:35:54.000000", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SAR": 0.0466487, + "EchoTime": 0.00313, + "RepetitionTime": 0.015, + "FlipAngle": 15, + "PartialFourier": 1, + "BaseResolution": 256, + "ShimSetting": [ + 3138, + -11508, + 10306, + -1088, + 927, + 4999, + -170, + -74 + ], + "TxRefAmp": 392.56, + "PhaseResolution": 1, + "ReceiveCoilName": "Spine_32", + "ReceiveCoilActiveElements": "HE3,4;NE1,2;SP1", + "PulseSequenceDetails": "%SiemensSeq%_gre", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 255, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "ParallelReductionFactorInPlane": 2, + "PixelBandwidth": 260, + "DwellTime": 7.5e-06, + "ImageOrientationPatientDICOM": [ + 0.999825, + 0.00111634, + -0.0186748, + -8.58299e-09, + 0.998218, + 0.0596708 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20171215 GCC4.8.5", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-mountSinai01/anat/sub-mountSinai01_space-other_T1w.json b/derivatives/data_preprocessed/sub-mountSinai01/anat/sub-mountSinai01_space-other_T1w.json index ca5d90f8e9..b67e0f7771 100644 --- a/derivatives/data_preprocessed/sub-mountSinai01/anat/sub-mountSinai01_space-other_T1w.json +++ b/derivatives/data_preprocessed/sub-mountSinai01/anat/sub-mountSinai01_space-other_T1w.json @@ -1,66 +1,79 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Skyra", - "InstitutionName": "MT_SINAI_MED_CTR_3T_SKYRA_RE_MR12", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "Madison_Avenue_1470_New_York_NYC_US_10029", - "DeviceSerialNumber": "45435", - "StationName": "AWP45435", - "BodyPartExamined": "CSPINE", - "PatientPosition": "HFS", - "ProcedureStepDescription": "RE_MRI_SPINE_CERVICAL_WITHOUT_CONTRAST", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "T1w", - "ProtocolName": "T1w", - "ScanningSequence": "GR_IR", - "SequenceVariant": "SK_SP_MP", - "ScanOptions": "IR", - "SequenceName": "_tfl3d1_16", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS3D", "DIS2D"], - "SeriesNumber": 2, - "AcquisitionTime": "14:06:48.670000", - "AcquisitionNumber": 1, - "SliceThickness": 1, - "SAR": 0.0905968, - "EchoTime": 0.00372, - "RepetitionTime": 2, - "InversionTime": 1, - "FlipAngle": 9, - "PartialFourier": 1, - "BaseResolution": 320, - "ShimSetting": [ - 3251, - -11475, - 10272, - -472, - 352, - -348, - 98, - -60 ], - "TxRefAmp": 388.447, - "PhaseResolution": 1, - "ReceiveCoilName": "Spine_32", - "ReceiveCoilActiveElements": "HE1-4;NE1,2;SP1", - "PulseSequenceDetails": "%SiemensSeq%_tfl", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 81.25, - "PhaseEncodingSteps": 259, - "AcquisitionMatrixPE": 260, - "ReconMatrixPE": 320, - "ParallelReductionFactorInPlane": 2, - "PixelBandwidth": 150, - "DwellTime": 1.04e-05, - "ImageOrientationPatientDICOM": [ - 0, - 1, - 0, - -0.0279217, - 0, - -0.99961 ], - "InPlanePhaseEncodingDirectionDICOM": "ROW", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20171215 GCC4.8.5" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Skyra", + "InstitutionName": "MT_SINAI_MED_CTR_3T_SKYRA_RE_MR12", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "Madison_Avenue_1470_New_York_NYC_US_10029", + "DeviceSerialNumber": "45435", + "StationName": "AWP45435", + "BodyPartExamined": "CSPINE", + "PatientPosition": "HFS", + "ProcedureStepDescription": "RE_MRI_SPINE_CERVICAL_WITHOUT_CONTRAST", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "T1w", + "ProtocolName": "T1w", + "ScanningSequence": "GR_IR", + "SequenceVariant": "SK_SP_MP", + "ScanOptions": "IR", + "SequenceName": "_tfl3d1_16", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS3D", + "DIS2D" + ], + "SeriesNumber": 2, + "AcquisitionTime": "14:06:48.670000", + "AcquisitionNumber": 1, + "SliceThickness": 1, + "SAR": 0.0905968, + "EchoTime": 0.00372, + "RepetitionTime": 2, + "InversionTime": 1, + "FlipAngle": 9, + "PartialFourier": 1, + "BaseResolution": 320, + "ShimSetting": [ + 3251, + -11475, + 10272, + -472, + 352, + -348, + 98, + -60 + ], + "TxRefAmp": 388.447, + "PhaseResolution": 1, + "ReceiveCoilName": "Spine_32", + "ReceiveCoilActiveElements": "HE1-4;NE1,2;SP1", + "PulseSequenceDetails": "%SiemensSeq%_tfl", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 81.25, + "PhaseEncodingSteps": 259, + "AcquisitionMatrixPE": 260, + "ReconMatrixPE": 320, + "ParallelReductionFactorInPlane": 2, + "PixelBandwidth": 150, + "DwellTime": 1.04e-05, + "ImageOrientationPatientDICOM": [ + 0, + 1, + 0, + -0.0279217, + 0, + -0.99961 + ], + "InPlanePhaseEncodingDirectionDICOM": "ROW", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20171215 GCC4.8.5", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-mountSinai01/anat/sub-mountSinai01_space-other_T2star.json b/derivatives/data_preprocessed/sub-mountSinai01/anat/sub-mountSinai01_space-other_T2star.json index 5ae9d88282..9b6a43a7e9 100644 --- a/derivatives/data_preprocessed/sub-mountSinai01/anat/sub-mountSinai01_space-other_T2star.json +++ b/derivatives/data_preprocessed/sub-mountSinai01/anat/sub-mountSinai01_space-other_T2star.json @@ -73,5 +73,9 @@ "InPlanePhaseEncodingDirectionDICOM": "COL", "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20171215 GCC4.8.5", - "AcquisitionDuration": 285.0 + "AcquisitionDuration": 285.0, + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-mountSinai01/anat/sub-mountSinai01_space-other_T2w.json b/derivatives/data_preprocessed/sub-mountSinai01/anat/sub-mountSinai01_space-other_T2w.json index 9a39aa7cba..8b396c0c75 100644 --- a/derivatives/data_preprocessed/sub-mountSinai01/anat/sub-mountSinai01_space-other_T2w.json +++ b/derivatives/data_preprocessed/sub-mountSinai01/anat/sub-mountSinai01_space-other_T2w.json @@ -1,67 +1,82 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Skyra", - "InstitutionName": "MT_SINAI_MED_CTR_3T_SKYRA_RE_MR12", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "Madison_Avenue_1470_New_York_NYC_US_10029", - "DeviceSerialNumber": "45435", - "StationName": "AWP45435", - "BodyPartExamined": "CSPINE", - "PatientPosition": "HFS", - "ProcedureStepDescription": "RE_MRI_SPINE_CERVICAL_WITHOUT_CONTRAST", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "T2w", - "ProtocolName": "T2w", - "ScanningSequence": "SE", - "SequenceVariant": "SK_SP_OSP", - "ScanOptions": "PFP", - "SequenceName": "_spcR_100", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS3D", "DIS2D", "SH", "FIL"], - "SeriesNumber": 5, - "AcquisitionTime": "14:12:12.007500", - "AcquisitionNumber": 1, - "SliceThickness": 0.8, - "SAR": 0.727437, - "EchoTime": 0.12, - "RepetitionTime": 1.5, - "FlipAngle": 120, - "PartialFourier": 1, - "BaseResolution": 320, - "ShimSetting": [ - 3229, - -11310, - 10162, - -174, - 499, - -389, - 119, - 1 ], - "TxRefAmp": 392.56, - "PhaseResolution": 1, - "PhaseOversampling": 0.8, - "ReceiveCoilName": "Spine_32", - "ReceiveCoilActiveElements": "HE3,4;NE1,2;SP1", - "PulseSequenceDetails": "%SiemensSeq%_tse_vfl", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 100, - "EchoTrainLength": 76, - "PhaseEncodingSteps": 422, - "AcquisitionMatrixPE": 320, - "ReconMatrixPE": 320, - "ParallelReductionFactorInPlane": 3, - "PixelBandwidth": 625, - "DwellTime": 2.5e-06, - "ImageOrientationPatientDICOM": [ - 1.54e-13, - 1, - 4.894e-12, - -0.0314108, - 4.897e-12, - -0.999507 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20171215 GCC4.8.5" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Skyra", + "InstitutionName": "MT_SINAI_MED_CTR_3T_SKYRA_RE_MR12", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "Madison_Avenue_1470_New_York_NYC_US_10029", + "DeviceSerialNumber": "45435", + "StationName": "AWP45435", + "BodyPartExamined": "CSPINE", + "PatientPosition": "HFS", + "ProcedureStepDescription": "RE_MRI_SPINE_CERVICAL_WITHOUT_CONTRAST", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "T2w", + "ProtocolName": "T2w", + "ScanningSequence": "SE", + "SequenceVariant": "SK_SP_OSP", + "ScanOptions": "PFP", + "SequenceName": "_spcR_100", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS3D", + "DIS2D", + "SH", + "FIL" + ], + "SeriesNumber": 5, + "AcquisitionTime": "14:12:12.007500", + "AcquisitionNumber": 1, + "SliceThickness": 0.8, + "SAR": 0.727437, + "EchoTime": 0.12, + "RepetitionTime": 1.5, + "FlipAngle": 120, + "PartialFourier": 1, + "BaseResolution": 320, + "ShimSetting": [ + 3229, + -11310, + 10162, + -174, + 499, + -389, + 119, + 1 + ], + "TxRefAmp": 392.56, + "PhaseResolution": 1, + "PhaseOversampling": 0.8, + "ReceiveCoilName": "Spine_32", + "ReceiveCoilActiveElements": "HE3,4;NE1,2;SP1", + "PulseSequenceDetails": "%SiemensSeq%_tse_vfl", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "EchoTrainLength": 76, + "PhaseEncodingSteps": 422, + "AcquisitionMatrixPE": 320, + "ReconMatrixPE": 320, + "ParallelReductionFactorInPlane": 3, + "PixelBandwidth": 625, + "DwellTime": 2.5e-06, + "ImageOrientationPatientDICOM": [ + 1.54e-13, + 1, + 4.894e-12, + -0.0314108, + 4.897e-12, + -0.999507 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20171215 GCC4.8.5", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-mountSinai02/anat/sub-mountSinai02_flip-1_mt-on_space-other_MTS.json b/derivatives/data_preprocessed/sub-mountSinai02/anat/sub-mountSinai02_flip-1_mt-on_space-other_MTS.json index 7ef4c93ba6..9daa33844b 100644 --- a/derivatives/data_preprocessed/sub-mountSinai02/anat/sub-mountSinai02_flip-1_mt-on_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-mountSinai02/anat/sub-mountSinai02_flip-1_mt-on_space-other_MTS.json @@ -1,65 +1,76 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Skyra", - "InstitutionName": "MT_SINAI_MED_CTR_3T_SKYRA_RE_MR12", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "Madison_Avenue_1470_New_York_NYC_US_10029", - "DeviceSerialNumber": "45435", - "StationName": "AWP45435", - "BodyPartExamined": "CSPINE", - "PatientPosition": "HFS", - "ProcedureStepDescription": "RE_MRI_SPINE_CERVICAL_WITHOUT_CONTRAST", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-MT1", - "ProtocolName": "GRE-MT1", - "ScanningSequence": "GR", - "SequenceVariant": "MTC_SP", - "ScanOptions": "MT", - "SequenceName": "_fl3d1", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS2D"], - "SeriesNumber": 7, - "AcquisitionTime": "15:49:9.647500", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SAR": 0.927027, - "EchoTime": 0.00313, - "RepetitionTime": 0.035, - "FlipAngle": 9, - "PartialFourier": 1, - "BaseResolution": 256, - "ShimSetting": [ - 3203, - -10863, - 10340, - -2220, - 441, - 4999, - -4194, - 27 ], - "TxRefAmp": 432.169, - "PhaseResolution": 1, - "ReceiveCoilName": "HeadNeck_20", - "ReceiveCoilActiveElements": "HE3,4;NE1,2", - "PulseSequenceDetails": "%SiemensSeq%_gre", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 100, - "PhaseEncodingSteps": 255, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 256, - "ParallelReductionFactorInPlane": 2, - "PixelBandwidth": 260, - "DwellTime": 7.5e-06, - "ImageOrientationPatientDICOM": [ - 1, - 1.01522e-05, - -0.00011577, - 4.6718e-08, - 0.996142, - 0.0877582 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20171215 GCC4.8.5" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Skyra", + "InstitutionName": "MT_SINAI_MED_CTR_3T_SKYRA_RE_MR12", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "Madison_Avenue_1470_New_York_NYC_US_10029", + "DeviceSerialNumber": "45435", + "StationName": "AWP45435", + "BodyPartExamined": "CSPINE", + "PatientPosition": "HFS", + "ProcedureStepDescription": "RE_MRI_SPINE_CERVICAL_WITHOUT_CONTRAST", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-MT1", + "ProtocolName": "GRE-MT1", + "ScanningSequence": "GR", + "SequenceVariant": "MTC_SP", + "ScanOptions": "MT", + "SequenceName": "_fl3d1", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS2D" + ], + "SeriesNumber": 7, + "AcquisitionTime": "15:49:9.647500", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SAR": 0.927027, + "EchoTime": 0.00313, + "RepetitionTime": 0.035, + "FlipAngle": 9, + "PartialFourier": 1, + "BaseResolution": 256, + "ShimSetting": [ + 3203, + -10863, + 10340, + -2220, + 441, + 4999, + -4194, + 27 + ], + "TxRefAmp": 432.169, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_20", + "ReceiveCoilActiveElements": "HE3,4;NE1,2", + "PulseSequenceDetails": "%SiemensSeq%_gre", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 255, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "ParallelReductionFactorInPlane": 2, + "PixelBandwidth": 260, + "DwellTime": 7.5e-06, + "ImageOrientationPatientDICOM": [ + 1, + 1.01522e-05, + -0.00011577, + 4.6718e-08, + 0.996142, + 0.0877582 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20171215 GCC4.8.5", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-mountSinai02/anat/sub-mountSinai02_flip-2_mt-off_space-other_MTS.json b/derivatives/data_preprocessed/sub-mountSinai02/anat/sub-mountSinai02_flip-2_mt-off_space-other_MTS.json index afc597dee2..35ac4a9d3d 100644 --- a/derivatives/data_preprocessed/sub-mountSinai02/anat/sub-mountSinai02_flip-2_mt-off_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-mountSinai02/anat/sub-mountSinai02_flip-2_mt-off_space-other_MTS.json @@ -1,64 +1,75 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Skyra", - "InstitutionName": "MT_SINAI_MED_CTR_3T_SKYRA_RE_MR12", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "Madison_Avenue_1470_New_York_NYC_US_10029", - "DeviceSerialNumber": "45435", - "StationName": "AWP45435", - "BodyPartExamined": "CSPINE", - "PatientPosition": "HFS", - "ProcedureStepDescription": "RE_MRI_SPINE_CERVICAL_WITHOUT_CONTRAST", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-T1w", - "ProtocolName": "GRE-T1w", - "ScanningSequence": "GR", - "SequenceVariant": "SP", - "SequenceName": "_fl3d1", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS2D"], - "SeriesNumber": 9, - "AcquisitionTime": "15:53:45.105000", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SAR": 0.0637514, - "EchoTime": 0.00313, - "RepetitionTime": 0.015, - "FlipAngle": 15, - "PartialFourier": 1, - "BaseResolution": 256, - "ShimSetting": [ - 3203, - -10863, - 10340, - -2220, - 441, - 4999, - -4194, - 27 ], - "TxRefAmp": 432.169, - "PhaseResolution": 1, - "ReceiveCoilName": "HeadNeck_20", - "ReceiveCoilActiveElements": "HE3,4;NE1,2", - "PulseSequenceDetails": "%SiemensSeq%_gre", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 100, - "PhaseEncodingSteps": 255, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 256, - "ParallelReductionFactorInPlane": 2, - "PixelBandwidth": 260, - "DwellTime": 7.5e-06, - "ImageOrientationPatientDICOM": [ - 1, - 1.01522e-05, - -0.00011577, - 4.6718e-08, - 0.996142, - 0.0877582 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20171215 GCC4.8.5" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Skyra", + "InstitutionName": "MT_SINAI_MED_CTR_3T_SKYRA_RE_MR12", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "Madison_Avenue_1470_New_York_NYC_US_10029", + "DeviceSerialNumber": "45435", + "StationName": "AWP45435", + "BodyPartExamined": "CSPINE", + "PatientPosition": "HFS", + "ProcedureStepDescription": "RE_MRI_SPINE_CERVICAL_WITHOUT_CONTRAST", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-T1w", + "ProtocolName": "GRE-T1w", + "ScanningSequence": "GR", + "SequenceVariant": "SP", + "SequenceName": "_fl3d1", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS2D" + ], + "SeriesNumber": 9, + "AcquisitionTime": "15:53:45.105000", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SAR": 0.0637514, + "EchoTime": 0.00313, + "RepetitionTime": 0.015, + "FlipAngle": 15, + "PartialFourier": 1, + "BaseResolution": 256, + "ShimSetting": [ + 3203, + -10863, + 10340, + -2220, + 441, + 4999, + -4194, + 27 + ], + "TxRefAmp": 432.169, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_20", + "ReceiveCoilActiveElements": "HE3,4;NE1,2", + "PulseSequenceDetails": "%SiemensSeq%_gre", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 255, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "ParallelReductionFactorInPlane": 2, + "PixelBandwidth": 260, + "DwellTime": 7.5e-06, + "ImageOrientationPatientDICOM": [ + 1, + 1.01522e-05, + -0.00011577, + 4.6718e-08, + 0.996142, + 0.0877582 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20171215 GCC4.8.5", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-mountSinai02/anat/sub-mountSinai02_space-other_T1w.json b/derivatives/data_preprocessed/sub-mountSinai02/anat/sub-mountSinai02_space-other_T1w.json index a548418a46..fb8a3e7a9a 100644 --- a/derivatives/data_preprocessed/sub-mountSinai02/anat/sub-mountSinai02_space-other_T1w.json +++ b/derivatives/data_preprocessed/sub-mountSinai02/anat/sub-mountSinai02_space-other_T1w.json @@ -1,66 +1,79 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Skyra", - "InstitutionName": "MT_SINAI_MED_CTR_3T_SKYRA_RE_MR12", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "Madison_Avenue_1470_New_York_NYC_US_10029", - "DeviceSerialNumber": "45435", - "StationName": "AWP45435", - "BodyPartExamined": "CSPINE", - "PatientPosition": "HFS", - "ProcedureStepDescription": "RE_MRI_SPINE_CERVICAL_WITHOUT_CONTRAST", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "T1w", - "ProtocolName": "T1w", - "ScanningSequence": "GR_IR", - "SequenceVariant": "SK_SP_MP", - "ScanOptions": "IR", - "SequenceName": "_tfl3d1_16", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS3D", "DIS2D"], - "SeriesNumber": 2, - "AcquisitionTime": "15:23:17.067500", - "AcquisitionNumber": 1, - "SliceThickness": 1, - "SAR": 0.116436, - "EchoTime": 0.00372, - "RepetitionTime": 2, - "InversionTime": 1, - "FlipAngle": 9, - "PartialFourier": 1, - "BaseResolution": 320, - "ShimSetting": [ - 3229, - -11310, - 10162, - -174, - 499, - -389, - 119, - 1 ], - "TxRefAmp": 416.763, - "PhaseResolution": 1, - "ReceiveCoilName": "Spine_32", - "ReceiveCoilActiveElements": "HE1-4;NE1,2;SP1", - "PulseSequenceDetails": "%SiemensSeq%_tfl", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 81.25, - "PhaseEncodingSteps": 259, - "AcquisitionMatrixPE": 260, - "ReconMatrixPE": 320, - "ParallelReductionFactorInPlane": 2, - "PixelBandwidth": 150, - "DwellTime": 1.04e-05, - "ImageOrientationPatientDICOM": [ - 0, - 1, - 0, - -0.00872651, - 0, - -0.999962 ], - "InPlanePhaseEncodingDirectionDICOM": "ROW", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20171215 GCC4.8.5" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Skyra", + "InstitutionName": "MT_SINAI_MED_CTR_3T_SKYRA_RE_MR12", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "Madison_Avenue_1470_New_York_NYC_US_10029", + "DeviceSerialNumber": "45435", + "StationName": "AWP45435", + "BodyPartExamined": "CSPINE", + "PatientPosition": "HFS", + "ProcedureStepDescription": "RE_MRI_SPINE_CERVICAL_WITHOUT_CONTRAST", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "T1w", + "ProtocolName": "T1w", + "ScanningSequence": "GR_IR", + "SequenceVariant": "SK_SP_MP", + "ScanOptions": "IR", + "SequenceName": "_tfl3d1_16", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS3D", + "DIS2D" + ], + "SeriesNumber": 2, + "AcquisitionTime": "15:23:17.067500", + "AcquisitionNumber": 1, + "SliceThickness": 1, + "SAR": 0.116436, + "EchoTime": 0.00372, + "RepetitionTime": 2, + "InversionTime": 1, + "FlipAngle": 9, + "PartialFourier": 1, + "BaseResolution": 320, + "ShimSetting": [ + 3229, + -11310, + 10162, + -174, + 499, + -389, + 119, + 1 + ], + "TxRefAmp": 416.763, + "PhaseResolution": 1, + "ReceiveCoilName": "Spine_32", + "ReceiveCoilActiveElements": "HE1-4;NE1,2;SP1", + "PulseSequenceDetails": "%SiemensSeq%_tfl", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 81.25, + "PhaseEncodingSteps": 259, + "AcquisitionMatrixPE": 260, + "ReconMatrixPE": 320, + "ParallelReductionFactorInPlane": 2, + "PixelBandwidth": 150, + "DwellTime": 1.04e-05, + "ImageOrientationPatientDICOM": [ + 0, + 1, + 0, + -0.00872651, + 0, + -0.999962 + ], + "InPlanePhaseEncodingDirectionDICOM": "ROW", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20171215 GCC4.8.5", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-mountSinai02/anat/sub-mountSinai02_space-other_T2star.json b/derivatives/data_preprocessed/sub-mountSinai02/anat/sub-mountSinai02_space-other_T2star.json index 1d7d534f07..b2512e0b49 100644 --- a/derivatives/data_preprocessed/sub-mountSinai02/anat/sub-mountSinai02_space-other_T2star.json +++ b/derivatives/data_preprocessed/sub-mountSinai02/anat/sub-mountSinai02_space-other_T2star.json @@ -73,5 +73,9 @@ "InPlanePhaseEncodingDirectionDICOM": "COL", "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20171215 GCC4.8.5", - "AcquisitionDuration": 285.0 + "AcquisitionDuration": 285.0, + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-mountSinai02/anat/sub-mountSinai02_space-other_T2w.json b/derivatives/data_preprocessed/sub-mountSinai02/anat/sub-mountSinai02_space-other_T2w.json index 5a7b994a89..ab96d598d8 100644 --- a/derivatives/data_preprocessed/sub-mountSinai02/anat/sub-mountSinai02_space-other_T2w.json +++ b/derivatives/data_preprocessed/sub-mountSinai02/anat/sub-mountSinai02_space-other_T2w.json @@ -1,67 +1,82 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Skyra", - "InstitutionName": "MT_SINAI_MED_CTR_3T_SKYRA_RE_MR12", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "Madison_Avenue_1470_New_York_NYC_US_10029", - "DeviceSerialNumber": "45435", - "StationName": "AWP45435", - "BodyPartExamined": "CSPINE", - "PatientPosition": "HFS", - "ProcedureStepDescription": "RE_MRI_SPINE_CERVICAL_WITHOUT_CONTRAST", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "T2w", - "ProtocolName": "T2w", - "ScanningSequence": "SE", - "SequenceVariant": "SK_SP_OSP", - "ScanOptions": "PFP", - "SequenceName": "_spcR_100", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS3D", "DIS2D", "SH", "FIL"], - "SeriesNumber": 4, - "AcquisitionTime": "15:29:34.760000", - "AcquisitionNumber": 1, - "SliceThickness": 0.8, - "SAR": 0.927027, - "EchoTime": 0.12, - "RepetitionTime": 1.5, - "FlipAngle": 120, - "PartialFourier": 1, - "BaseResolution": 320, - "ShimSetting": [ - 3229, - -11310, - 10162, - -174, - 499, - -389, - 119, - 1 ], - "TxRefAmp": 442.614, - "PhaseResolution": 1, - "PhaseOversampling": 0.8, - "ReceiveCoilName": "Spine_32", - "ReceiveCoilActiveElements": "HE3,4;NE1,2;SP1", - "PulseSequenceDetails": "%SiemensSeq%_tse_vfl", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 100, - "EchoTrainLength": 76, - "PhaseEncodingSteps": 422, - "AcquisitionMatrixPE": 320, - "ReconMatrixPE": 320, - "ParallelReductionFactorInPlane": 3, - "PixelBandwidth": 625, - "DwellTime": 2.5e-06, - "ImageOrientationPatientDICOM": [ - 0, - 1, - 0, - -0.00872651, - 0, - -0.999962 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20171215 GCC4.8.5" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Skyra", + "InstitutionName": "MT_SINAI_MED_CTR_3T_SKYRA_RE_MR12", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "Madison_Avenue_1470_New_York_NYC_US_10029", + "DeviceSerialNumber": "45435", + "StationName": "AWP45435", + "BodyPartExamined": "CSPINE", + "PatientPosition": "HFS", + "ProcedureStepDescription": "RE_MRI_SPINE_CERVICAL_WITHOUT_CONTRAST", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "T2w", + "ProtocolName": "T2w", + "ScanningSequence": "SE", + "SequenceVariant": "SK_SP_OSP", + "ScanOptions": "PFP", + "SequenceName": "_spcR_100", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS3D", + "DIS2D", + "SH", + "FIL" + ], + "SeriesNumber": 4, + "AcquisitionTime": "15:29:34.760000", + "AcquisitionNumber": 1, + "SliceThickness": 0.8, + "SAR": 0.927027, + "EchoTime": 0.12, + "RepetitionTime": 1.5, + "FlipAngle": 120, + "PartialFourier": 1, + "BaseResolution": 320, + "ShimSetting": [ + 3229, + -11310, + 10162, + -174, + 499, + -389, + 119, + 1 + ], + "TxRefAmp": 442.614, + "PhaseResolution": 1, + "PhaseOversampling": 0.8, + "ReceiveCoilName": "Spine_32", + "ReceiveCoilActiveElements": "HE3,4;NE1,2;SP1", + "PulseSequenceDetails": "%SiemensSeq%_tse_vfl", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "EchoTrainLength": 76, + "PhaseEncodingSteps": 422, + "AcquisitionMatrixPE": 320, + "ReconMatrixPE": 320, + "ParallelReductionFactorInPlane": 3, + "PixelBandwidth": 625, + "DwellTime": 2.5e-06, + "ImageOrientationPatientDICOM": [ + 0, + 1, + 0, + -0.00872651, + 0, + -0.999962 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20171215 GCC4.8.5", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-mountSinai03/anat/sub-mountSinai03_flip-1_mt-on_space-other_MTS.json b/derivatives/data_preprocessed/sub-mountSinai03/anat/sub-mountSinai03_flip-1_mt-on_space-other_MTS.json index e86b0c979b..cc9063bfad 100644 --- a/derivatives/data_preprocessed/sub-mountSinai03/anat/sub-mountSinai03_flip-1_mt-on_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-mountSinai03/anat/sub-mountSinai03_flip-1_mt-on_space-other_MTS.json @@ -1,65 +1,75 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Skyra", - "InstitutionName": "MT_SINAI_MED_CTR_3T_SKYRA_RE_MR12", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "Madison_Avenue_1470_New_York_NYC_US_10029", - "DeviceSerialNumber": "45435", - "StationName": "AWP45435", - "BodyPartExamined": "CSPINE", - "PatientPosition": "HFS", - "ProcedureStepDescription": "RE_MRI_SPINE_CERVICAL_WITHOUT_CONTRAST", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-MT1", - "ProtocolName": "GRE-MT1", - "ScanningSequence": "GR", - "SequenceVariant": "MTC_SP", - "ScanOptions": "MT", - "SequenceName": "_fl3d1", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "DIS2D"], - "SeriesNumber": 8, - "AcquisitionTime": "14:29:6.932500", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SAR": 0.761559, - "EchoTime": 0.00313, - "RepetitionTime": 0.035, - "FlipAngle": 9, - "PartialFourier": 1, - "BaseResolution": 256, - "ShimSetting": [ - 3571, - -11517, - 10598, - -1252, - 1761, - 4021, - 4999, - 2847 ], - "TxRefAmp": 395.776, - "PhaseResolution": 1, - "ReceiveCoilName": "Spine_32", - "ReceiveCoilActiveElements": "HE3,4;NE1,2;SP1", - "PulseSequenceDetails": "%SiemensSeq%_gre", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 100, - "PhaseEncodingSteps": 255, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 256, - "ParallelReductionFactorInPlane": 2, - "PixelBandwidth": 260, - "DwellTime": 7.5e-06, - "ImageOrientationPatientDICOM": [ - 0.998398, - 0.0104412, - -0.0556068, - -3.31906e-08, - 0.982825, - 0.184542 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20171215 Clang9.0.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Skyra", + "InstitutionName": "MT_SINAI_MED_CTR_3T_SKYRA_RE_MR12", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "Madison_Avenue_1470_New_York_NYC_US_10029", + "DeviceSerialNumber": "45435", + "StationName": "AWP45435", + "BodyPartExamined": "CSPINE", + "PatientPosition": "HFS", + "ProcedureStepDescription": "RE_MRI_SPINE_CERVICAL_WITHOUT_CONTRAST", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-MT1", + "ProtocolName": "GRE-MT1", + "ScanningSequence": "GR", + "SequenceVariant": "MTC_SP", + "ScanOptions": "MT", + "SequenceName": "_fl3d1", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "DIS2D" + ], + "SeriesNumber": 8, + "AcquisitionTime": "14:29:6.932500", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SAR": 0.761559, + "EchoTime": 0.00313, + "RepetitionTime": 0.035, + "FlipAngle": 9, + "PartialFourier": 1, + "BaseResolution": 256, + "ShimSetting": [ + 3571, + -11517, + 10598, + -1252, + 1761, + 4021, + 4999, + 2847 + ], + "TxRefAmp": 395.776, + "PhaseResolution": 1, + "ReceiveCoilName": "Spine_32", + "ReceiveCoilActiveElements": "HE3,4;NE1,2;SP1", + "PulseSequenceDetails": "%SiemensSeq%_gre", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 255, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "ParallelReductionFactorInPlane": 2, + "PixelBandwidth": 260, + "DwellTime": 7.5e-06, + "ImageOrientationPatientDICOM": [ + 0.998398, + 0.0104412, + -0.0556068, + -3.31906e-08, + 0.982825, + 0.184542 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20171215 Clang9.0.0", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-mountSinai03/anat/sub-mountSinai03_flip-2_mt-off_space-other_MTS.json b/derivatives/data_preprocessed/sub-mountSinai03/anat/sub-mountSinai03_flip-2_mt-off_space-other_MTS.json index 47853858a5..bd39fea9e7 100644 --- a/derivatives/data_preprocessed/sub-mountSinai03/anat/sub-mountSinai03_flip-2_mt-off_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-mountSinai03/anat/sub-mountSinai03_flip-2_mt-off_space-other_MTS.json @@ -1,64 +1,74 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Skyra", - "InstitutionName": "MT_SINAI_MED_CTR_3T_SKYRA_RE_MR12", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "Madison_Avenue_1470_New_York_NYC_US_10029", - "DeviceSerialNumber": "45435", - "StationName": "AWP45435", - "BodyPartExamined": "CSPINE", - "PatientPosition": "HFS", - "ProcedureStepDescription": "RE_MRI_SPINE_CERVICAL_WITHOUT_CONTRAST", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-T1w", - "ProtocolName": "GRE-T1w", - "ScanningSequence": "GR", - "SequenceVariant": "SP", - "SequenceName": "_fl3d1", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "DIS2D"], - "SeriesNumber": 10, - "AcquisitionTime": "14:33:51.877500", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SAR": 0.0493771, - "EchoTime": 0.00313, - "RepetitionTime": 0.015, - "FlipAngle": 15, - "PartialFourier": 1, - "BaseResolution": 256, - "ShimSetting": [ - 3571, - -11517, - 10598, - -1252, - 1761, - 4021, - 4999, - 2847 ], - "TxRefAmp": 395.776, - "PhaseResolution": 1, - "ReceiveCoilName": "Spine_32", - "ReceiveCoilActiveElements": "HE3,4;NE1,2;SP1", - "PulseSequenceDetails": "%SiemensSeq%_gre", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 100, - "PhaseEncodingSteps": 255, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 256, - "ParallelReductionFactorInPlane": 2, - "PixelBandwidth": 260, - "DwellTime": 7.5e-06, - "ImageOrientationPatientDICOM": [ - 0.998398, - 0.0104412, - -0.0556068, - -3.31906e-08, - 0.982825, - 0.184542 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20171215 Clang9.0.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Skyra", + "InstitutionName": "MT_SINAI_MED_CTR_3T_SKYRA_RE_MR12", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "Madison_Avenue_1470_New_York_NYC_US_10029", + "DeviceSerialNumber": "45435", + "StationName": "AWP45435", + "BodyPartExamined": "CSPINE", + "PatientPosition": "HFS", + "ProcedureStepDescription": "RE_MRI_SPINE_CERVICAL_WITHOUT_CONTRAST", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-T1w", + "ProtocolName": "GRE-T1w", + "ScanningSequence": "GR", + "SequenceVariant": "SP", + "SequenceName": "_fl3d1", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "DIS2D" + ], + "SeriesNumber": 10, + "AcquisitionTime": "14:33:51.877500", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SAR": 0.0493771, + "EchoTime": 0.00313, + "RepetitionTime": 0.015, + "FlipAngle": 15, + "PartialFourier": 1, + "BaseResolution": 256, + "ShimSetting": [ + 3571, + -11517, + 10598, + -1252, + 1761, + 4021, + 4999, + 2847 + ], + "TxRefAmp": 395.776, + "PhaseResolution": 1, + "ReceiveCoilName": "Spine_32", + "ReceiveCoilActiveElements": "HE3,4;NE1,2;SP1", + "PulseSequenceDetails": "%SiemensSeq%_gre", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 255, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "ParallelReductionFactorInPlane": 2, + "PixelBandwidth": 260, + "DwellTime": 7.5e-06, + "ImageOrientationPatientDICOM": [ + 0.998398, + 0.0104412, + -0.0556068, + -3.31906e-08, + 0.982825, + 0.184542 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20171215 Clang9.0.0", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-mountSinai03/anat/sub-mountSinai03_space-other_T1w.json b/derivatives/data_preprocessed/sub-mountSinai03/anat/sub-mountSinai03_space-other_T1w.json index a173d47b70..dd8d0c9b40 100644 --- a/derivatives/data_preprocessed/sub-mountSinai03/anat/sub-mountSinai03_space-other_T1w.json +++ b/derivatives/data_preprocessed/sub-mountSinai03/anat/sub-mountSinai03_space-other_T1w.json @@ -1,66 +1,79 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Skyra", - "InstitutionName": "MT_SINAI_MED_CTR_3T_SKYRA_RE_MR12", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "Madison_Avenue_1470_New_York_NYC_US_10029", - "DeviceSerialNumber": "45435", - "StationName": "AWP45435", - "BodyPartExamined": "CSPINE", - "PatientPosition": "HFS", - "ProcedureStepDescription": "RE_MRI_SPINE_CERVICAL_WITHOUT_CONTRAST", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "T1w", - "ProtocolName": "T1w", - "ScanningSequence": "GR_IR", - "SequenceVariant": "SK_SP_MP", - "ScanOptions": "IR", - "SequenceName": "_tfl3d1_16", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS3D", "DIS2D"], - "SeriesNumber": 3, - "AcquisitionTime": "14:04:28.690000", - "AcquisitionNumber": 1, - "SliceThickness": 1, - "SAR": 0.0857342, - "EchoTime": 0.00372, - "RepetitionTime": 2, - "InversionTime": 1, - "FlipAngle": 9, - "PartialFourier": 1, - "BaseResolution": 320, - "ShimSetting": [ - 3229, - -11310, - 10162, - -174, - 499, - -389, - 119, - 1 ], - "TxRefAmp": 371.619, - "PhaseResolution": 1, - "ReceiveCoilName": "Spine_32", - "ReceiveCoilActiveElements": "HE1-4;NE1,2;SP1", - "PulseSequenceDetails": "%SiemensSeq%_tfl", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 81.25, - "PhaseEncodingSteps": 259, - "AcquisitionMatrixPE": 260, - "ReconMatrixPE": 320, - "ParallelReductionFactorInPlane": 2, - "PixelBandwidth": 150, - "DwellTime": 1.04e-05, - "ImageOrientationPatientDICOM": [ - 0, - 1, - 0, - -0.057564, - 0, - -0.998342 ], - "InPlanePhaseEncodingDirectionDICOM": "ROW", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20171215 Clang9.0.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Skyra", + "InstitutionName": "MT_SINAI_MED_CTR_3T_SKYRA_RE_MR12", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "Madison_Avenue_1470_New_York_NYC_US_10029", + "DeviceSerialNumber": "45435", + "StationName": "AWP45435", + "BodyPartExamined": "CSPINE", + "PatientPosition": "HFS", + "ProcedureStepDescription": "RE_MRI_SPINE_CERVICAL_WITHOUT_CONTRAST", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "T1w", + "ProtocolName": "T1w", + "ScanningSequence": "GR_IR", + "SequenceVariant": "SK_SP_MP", + "ScanOptions": "IR", + "SequenceName": "_tfl3d1_16", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS3D", + "DIS2D" + ], + "SeriesNumber": 3, + "AcquisitionTime": "14:04:28.690000", + "AcquisitionNumber": 1, + "SliceThickness": 1, + "SAR": 0.0857342, + "EchoTime": 0.00372, + "RepetitionTime": 2, + "InversionTime": 1, + "FlipAngle": 9, + "PartialFourier": 1, + "BaseResolution": 320, + "ShimSetting": [ + 3229, + -11310, + 10162, + -174, + 499, + -389, + 119, + 1 + ], + "TxRefAmp": 371.619, + "PhaseResolution": 1, + "ReceiveCoilName": "Spine_32", + "ReceiveCoilActiveElements": "HE1-4;NE1,2;SP1", + "PulseSequenceDetails": "%SiemensSeq%_tfl", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 81.25, + "PhaseEncodingSteps": 259, + "AcquisitionMatrixPE": 260, + "ReconMatrixPE": 320, + "ParallelReductionFactorInPlane": 2, + "PixelBandwidth": 150, + "DwellTime": 1.04e-05, + "ImageOrientationPatientDICOM": [ + 0, + 1, + 0, + -0.057564, + 0, + -0.998342 + ], + "InPlanePhaseEncodingDirectionDICOM": "ROW", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20171215 Clang9.0.0", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-mountSinai03/anat/sub-mountSinai03_space-other_T2star.json b/derivatives/data_preprocessed/sub-mountSinai03/anat/sub-mountSinai03_space-other_T2star.json index 69b394f82a..203b33fcaa 100644 --- a/derivatives/data_preprocessed/sub-mountSinai03/anat/sub-mountSinai03_space-other_T2star.json +++ b/derivatives/data_preprocessed/sub-mountSinai03/anat/sub-mountSinai03_space-other_T2star.json @@ -73,5 +73,9 @@ "InPlanePhaseEncodingDirectionDICOM": "COL", "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20171215 Clang9.0.0", - "AcquisitionDuration": 285.0 + "AcquisitionDuration": 285.0, + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-mountSinai03/anat/sub-mountSinai03_space-other_T2w.json b/derivatives/data_preprocessed/sub-mountSinai03/anat/sub-mountSinai03_space-other_T2w.json index fbbd5c1e8c..96b6e3eedb 100644 --- a/derivatives/data_preprocessed/sub-mountSinai03/anat/sub-mountSinai03_space-other_T2w.json +++ b/derivatives/data_preprocessed/sub-mountSinai03/anat/sub-mountSinai03_space-other_T2w.json @@ -1,68 +1,83 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.258, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Skyra", - "InstitutionName": "MT_SINAI_MED_CTR_3T_SKYRA_RE_MR12", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "Madison_Avenue_1470_New_York_NYC_US_10029", - "DeviceSerialNumber": "45435", - "StationName": "AWP45435", - "BodyPartExamined": "BRAIN", - "PatientPosition": "HFS", - "ProcedureStepDescription": "RE_MRI_BRAIN_WITHOUT_CONTRAST", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "T2w", - "ProtocolName": "T2w", - "ScanningSequence": "SE", - "SequenceVariant": "SK_SP_OSP", - "ScanOptions": "PFP", - "SequenceName": "_spcR_100", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS3D", "DIS2D", "SH", "FIL"], - "SeriesNumber": 2, - "AcquisitionTime": "16:02:5.057500", - "AcquisitionNumber": 1, - "SliceThickness": 0.8, - "SAR": 0.760111, - "EchoTime": 0.12, - "RepetitionTime": 1.5, - "FlipAngle": 120, - "PartialFourier": 1, - "BaseResolution": 320, - "ShimSetting": [ - 3232, - -11271, - 10164, - -164, - 485, - -369, - 146, - -10 ], - "TxRefAmp": 387.924, - "PhaseResolution": 1, - "PhaseOversampling": 0.8, - "ReceiveCoilName": "Spine_32", - "ReceiveCoilActiveElements": "HE3,4;NE1,2;SP1", - "CoilString": "HE3_4;NE1_2;SP1", - "PulseSequenceDetails": "%SiemensSeq%_tse_vfl", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 100, - "EchoTrainLength": 76, - "PhaseEncodingSteps": 422, - "AcquisitionMatrixPE": 320, - "ReconMatrixPE": 320, - "PixelBandwidth": 625, - "DwellTime": 2.5e-06, - "ImageOrientationPatientDICOM": [ - 2.82e-13, - 1, - 4.888e-12, - -0.0575641, - 4.897e-12, - -0.998342 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181114 GCC5.4.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 123.258, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Skyra", + "InstitutionName": "MT_SINAI_MED_CTR_3T_SKYRA_RE_MR12", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "Madison_Avenue_1470_New_York_NYC_US_10029", + "DeviceSerialNumber": "45435", + "StationName": "AWP45435", + "BodyPartExamined": "BRAIN", + "PatientPosition": "HFS", + "ProcedureStepDescription": "RE_MRI_BRAIN_WITHOUT_CONTRAST", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "T2w", + "ProtocolName": "T2w", + "ScanningSequence": "SE", + "SequenceVariant": "SK_SP_OSP", + "ScanOptions": "PFP", + "SequenceName": "_spcR_100", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS3D", + "DIS2D", + "SH", + "FIL" + ], + "SeriesNumber": 2, + "AcquisitionTime": "16:02:5.057500", + "AcquisitionNumber": 1, + "SliceThickness": 0.8, + "SAR": 0.760111, + "EchoTime": 0.12, + "RepetitionTime": 1.5, + "FlipAngle": 120, + "PartialFourier": 1, + "BaseResolution": 320, + "ShimSetting": [ + 3232, + -11271, + 10164, + -164, + 485, + -369, + 146, + -10 + ], + "TxRefAmp": 387.924, + "PhaseResolution": 1, + "PhaseOversampling": 0.8, + "ReceiveCoilName": "Spine_32", + "ReceiveCoilActiveElements": "HE3,4;NE1,2;SP1", + "CoilString": "HE3_4;NE1_2;SP1", + "PulseSequenceDetails": "%SiemensSeq%_tse_vfl", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "EchoTrainLength": 76, + "PhaseEncodingSteps": 422, + "AcquisitionMatrixPE": 320, + "ReconMatrixPE": 320, + "PixelBandwidth": 625, + "DwellTime": 2.5e-06, + "ImageOrientationPatientDICOM": [ + 2.82e-13, + 1, + 4.888e-12, + -0.0575641, + 4.897e-12, + -0.998342 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181114 GCC5.4.0", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-mountSinai04/anat/sub-mountSinai04_flip-1_mt-on_space-other_MTS.json b/derivatives/data_preprocessed/sub-mountSinai04/anat/sub-mountSinai04_flip-1_mt-on_space-other_MTS.json index 386cc22c17..ef119bc0cb 100644 --- a/derivatives/data_preprocessed/sub-mountSinai04/anat/sub-mountSinai04_flip-1_mt-on_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-mountSinai04/anat/sub-mountSinai04_flip-1_mt-on_space-other_MTS.json @@ -1,66 +1,77 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.258, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Skyra", - "InstitutionName": "MT_SINAI_MED_CTR_3T_SKYRA_RE_MR12", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "Madison_Avenue_1470_New_York_NYC_US_10029", - "DeviceSerialNumber": "45435", - "StationName": "AWP45435", - "BodyPartExamined": "CSPINE", - "PatientPosition": "HFS", - "ProcedureStepDescription": "RE_MRI_SPINE_CERVICAL_WITHOUT_CONTRAST", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-MT1", - "ProtocolName": "GRE-MT1", - "ScanningSequence": "GR", - "SequenceVariant": "MTC_SP", - "ScanOptions": "MT", - "SequenceName": "_fl3d1", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS2D"], - "SeriesNumber": 8, - "AcquisitionTime": "12:53:56.987500", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SAR": 0.815535, - "EchoTime": 0.00313, - "RepetitionTime": 0.035, - "FlipAngle": 9, - "PartialFourier": 1, - "BaseResolution": 256, - "ShimSetting": [ - 3173, - -11740, - 10160, - -605, - -221, - 2672, - 4999, - -560 ], - "TxRefAmp": 375.07, - "PhaseResolution": 1, - "ReceiveCoilName": "HeadNeck_20", - "ReceiveCoilActiveElements": "HE3,4;NE1,2", - "CoilString": "HE3_4;NE1_2", - "PulseSequenceDetails": "%SiemensSeq%_gre", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 100, - "PhaseEncodingSteps": 255, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 256, - "PixelBandwidth": 260, - "DwellTime": 7.5e-06, - "ImageOrientationPatientDICOM": [ - 0.997626, - -0.0102394, - 0.0681013, - -4.20969e-08, - 0.988885, - 0.148685 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181114 GCC5.4.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 123.258, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Skyra", + "InstitutionName": "MT_SINAI_MED_CTR_3T_SKYRA_RE_MR12", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "Madison_Avenue_1470_New_York_NYC_US_10029", + "DeviceSerialNumber": "45435", + "StationName": "AWP45435", + "BodyPartExamined": "CSPINE", + "PatientPosition": "HFS", + "ProcedureStepDescription": "RE_MRI_SPINE_CERVICAL_WITHOUT_CONTRAST", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-MT1", + "ProtocolName": "GRE-MT1", + "ScanningSequence": "GR", + "SequenceVariant": "MTC_SP", + "ScanOptions": "MT", + "SequenceName": "_fl3d1", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS2D" + ], + "SeriesNumber": 8, + "AcquisitionTime": "12:53:56.987500", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SAR": 0.815535, + "EchoTime": 0.00313, + "RepetitionTime": 0.035, + "FlipAngle": 9, + "PartialFourier": 1, + "BaseResolution": 256, + "ShimSetting": [ + 3173, + -11740, + 10160, + -605, + -221, + 2672, + 4999, + -560 + ], + "TxRefAmp": 375.07, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_20", + "ReceiveCoilActiveElements": "HE3,4;NE1,2", + "CoilString": "HE3_4;NE1_2", + "PulseSequenceDetails": "%SiemensSeq%_gre", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 255, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "PixelBandwidth": 260, + "DwellTime": 7.5e-06, + "ImageOrientationPatientDICOM": [ + 0.997626, + -0.0102394, + 0.0681013, + -4.20969e-08, + 0.988885, + 0.148685 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181114 GCC5.4.0", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-mountSinai04/anat/sub-mountSinai04_flip-2_mt-off_space-other_MTS.json b/derivatives/data_preprocessed/sub-mountSinai04/anat/sub-mountSinai04_flip-2_mt-off_space-other_MTS.json index cd3bb2cf63..89893e88d7 100644 --- a/derivatives/data_preprocessed/sub-mountSinai04/anat/sub-mountSinai04_flip-2_mt-off_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-mountSinai04/anat/sub-mountSinai04_flip-2_mt-off_space-other_MTS.json @@ -1,65 +1,76 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.258, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Skyra", - "InstitutionName": "MT_SINAI_MED_CTR_3T_SKYRA_RE_MR12", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "Madison_Avenue_1470_New_York_NYC_US_10029", - "DeviceSerialNumber": "45435", - "StationName": "AWP45435", - "BodyPartExamined": "CSPINE", - "PatientPosition": "HFS", - "ProcedureStepDescription": "RE_MRI_SPINE_CERVICAL_WITHOUT_CONTRAST", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-T1w", - "ProtocolName": "GRE-T1w", - "ScanningSequence": "GR", - "SequenceVariant": "SP", - "SequenceName": "_fl3d1", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS2D"], - "SeriesNumber": 10, - "AcquisitionTime": "12:58:22.962500", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SAR": 0.0528768, - "EchoTime": 0.00313, - "RepetitionTime": 0.015, - "FlipAngle": 15, - "PartialFourier": 1, - "BaseResolution": 256, - "ShimSetting": [ - 3173, - -11740, - 10160, - -605, - -221, - 2672, - 4999, - -560 ], - "TxRefAmp": 375.07, - "PhaseResolution": 1, - "ReceiveCoilName": "HeadNeck_20", - "ReceiveCoilActiveElements": "HE3,4;NE1,2", - "CoilString": "HE3_4;NE1_2", - "PulseSequenceDetails": "%SiemensSeq%_gre", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 100, - "PhaseEncodingSteps": 255, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 256, - "PixelBandwidth": 260, - "DwellTime": 7.5e-06, - "ImageOrientationPatientDICOM": [ - 0.997626, - -0.0102394, - 0.0681013, - -4.20969e-08, - 0.988885, - 0.148685 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181114 GCC5.4.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 123.258, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Skyra", + "InstitutionName": "MT_SINAI_MED_CTR_3T_SKYRA_RE_MR12", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "Madison_Avenue_1470_New_York_NYC_US_10029", + "DeviceSerialNumber": "45435", + "StationName": "AWP45435", + "BodyPartExamined": "CSPINE", + "PatientPosition": "HFS", + "ProcedureStepDescription": "RE_MRI_SPINE_CERVICAL_WITHOUT_CONTRAST", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-T1w", + "ProtocolName": "GRE-T1w", + "ScanningSequence": "GR", + "SequenceVariant": "SP", + "SequenceName": "_fl3d1", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS2D" + ], + "SeriesNumber": 10, + "AcquisitionTime": "12:58:22.962500", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SAR": 0.0528768, + "EchoTime": 0.00313, + "RepetitionTime": 0.015, + "FlipAngle": 15, + "PartialFourier": 1, + "BaseResolution": 256, + "ShimSetting": [ + 3173, + -11740, + 10160, + -605, + -221, + 2672, + 4999, + -560 + ], + "TxRefAmp": 375.07, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_20", + "ReceiveCoilActiveElements": "HE3,4;NE1,2", + "CoilString": "HE3_4;NE1_2", + "PulseSequenceDetails": "%SiemensSeq%_gre", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 255, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "PixelBandwidth": 260, + "DwellTime": 7.5e-06, + "ImageOrientationPatientDICOM": [ + 0.997626, + -0.0102394, + 0.0681013, + -4.20969e-08, + 0.988885, + 0.148685 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181114 GCC5.4.0", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-mountSinai04/anat/sub-mountSinai04_space-other_T1w.json b/derivatives/data_preprocessed/sub-mountSinai04/anat/sub-mountSinai04_space-other_T1w.json index 27e841441b..615567c8e8 100644 --- a/derivatives/data_preprocessed/sub-mountSinai04/anat/sub-mountSinai04_space-other_T1w.json +++ b/derivatives/data_preprocessed/sub-mountSinai04/anat/sub-mountSinai04_space-other_T1w.json @@ -1,67 +1,80 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.258, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Skyra", - "InstitutionName": "MT_SINAI_MED_CTR_3T_SKYRA_RE_MR12", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "Madison_Avenue_1470_New_York_NYC_US_10029", - "DeviceSerialNumber": "45435", - "StationName": "AWP45435", - "BodyPartExamined": "CSPINE", - "PatientPosition": "HFS", - "ProcedureStepDescription": "RE_MRI_SPINE_CERVICAL_WITHOUT_CONTRAST", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "T1w", - "ProtocolName": "T1w", - "ScanningSequence": "GR_IR", - "SequenceVariant": "SK_SP_MP", - "ScanOptions": "IR", - "SequenceName": "_tfl3d1_16", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS3D", "DIS2D"], - "SeriesNumber": 3, - "AcquisitionTime": "12:28:24.002500", - "AcquisitionNumber": 1, - "SliceThickness": 1, - "SAR": 0.103165, - "EchoTime": 0.00372, - "RepetitionTime": 2, - "InversionTime": 1, - "FlipAngle": 9, - "PartialFourier": 1, - "BaseResolution": 320, - "ShimSetting": [ - 3232, - -11271, - 10164, - -164, - 485, - -369, - 146, - -10 ], - "TxRefAmp": 372.387, - "PhaseResolution": 1, - "ReceiveCoilName": "Spine_32", - "ReceiveCoilActiveElements": "HE1-4;NE1,2;SP1", - "CoilString": "HE1-4;NE1_2;SP1", - "PulseSequenceDetails": "%SiemensSeq%_tfl", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 81.25, - "PhaseEncodingSteps": 259, - "AcquisitionMatrixPE": 260, - "ReconMatrixPE": 320, - "PixelBandwidth": 150, - "DwellTime": 1.04e-05, - "ImageOrientationPatientDICOM": [ - 0, - 1, - 0, - 0.0436194, - 0, - -0.999048 ], - "InPlanePhaseEncodingDirectionDICOM": "ROW", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181114 GCC5.4.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 123.258, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Skyra", + "InstitutionName": "MT_SINAI_MED_CTR_3T_SKYRA_RE_MR12", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "Madison_Avenue_1470_New_York_NYC_US_10029", + "DeviceSerialNumber": "45435", + "StationName": "AWP45435", + "BodyPartExamined": "CSPINE", + "PatientPosition": "HFS", + "ProcedureStepDescription": "RE_MRI_SPINE_CERVICAL_WITHOUT_CONTRAST", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "T1w", + "ProtocolName": "T1w", + "ScanningSequence": "GR_IR", + "SequenceVariant": "SK_SP_MP", + "ScanOptions": "IR", + "SequenceName": "_tfl3d1_16", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS3D", + "DIS2D" + ], + "SeriesNumber": 3, + "AcquisitionTime": "12:28:24.002500", + "AcquisitionNumber": 1, + "SliceThickness": 1, + "SAR": 0.103165, + "EchoTime": 0.00372, + "RepetitionTime": 2, + "InversionTime": 1, + "FlipAngle": 9, + "PartialFourier": 1, + "BaseResolution": 320, + "ShimSetting": [ + 3232, + -11271, + 10164, + -164, + 485, + -369, + 146, + -10 + ], + "TxRefAmp": 372.387, + "PhaseResolution": 1, + "ReceiveCoilName": "Spine_32", + "ReceiveCoilActiveElements": "HE1-4;NE1,2;SP1", + "CoilString": "HE1-4;NE1_2;SP1", + "PulseSequenceDetails": "%SiemensSeq%_tfl", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 81.25, + "PhaseEncodingSteps": 259, + "AcquisitionMatrixPE": 260, + "ReconMatrixPE": 320, + "PixelBandwidth": 150, + "DwellTime": 1.04e-05, + "ImageOrientationPatientDICOM": [ + 0, + 1, + 0, + 0.0436194, + 0, + -0.999048 + ], + "InPlanePhaseEncodingDirectionDICOM": "ROW", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181114 GCC5.4.0", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-mountSinai04/anat/sub-mountSinai04_space-other_T2star.json b/derivatives/data_preprocessed/sub-mountSinai04/anat/sub-mountSinai04_space-other_T2star.json index 7e03fbdde7..dd45d2530e 100644 --- a/derivatives/data_preprocessed/sub-mountSinai04/anat/sub-mountSinai04_space-other_T2star.json +++ b/derivatives/data_preprocessed/sub-mountSinai04/anat/sub-mountSinai04_space-other_T2star.json @@ -75,5 +75,9 @@ "InPlanePhaseEncodingDirectionDICOM": "COL", "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20181114 GCC5.4.0", - "AcquisitionDuration": 285.0 + "AcquisitionDuration": 285.0, + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-mountSinai04/anat/sub-mountSinai04_space-other_T2w.json b/derivatives/data_preprocessed/sub-mountSinai04/anat/sub-mountSinai04_space-other_T2w.json index 4fcc263c41..66cd277212 100644 --- a/derivatives/data_preprocessed/sub-mountSinai04/anat/sub-mountSinai04_space-other_T2w.json +++ b/derivatives/data_preprocessed/sub-mountSinai04/anat/sub-mountSinai04_space-other_T2w.json @@ -1,68 +1,83 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.258, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Skyra", - "InstitutionName": "MT_SINAI_MED_CTR_3T_SKYRA_RE_MR12", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "Madison_Avenue_1470_New_York_NYC_US_10029", - "DeviceSerialNumber": "45435", - "StationName": "AWP45435", - "BodyPartExamined": "CSPINE", - "PatientPosition": "HFS", - "ProcedureStepDescription": "RE_MRI_SPINE_CERVICAL_WITHOUT_CONTRAST", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "T2w", - "ProtocolName": "T2w", - "ScanningSequence": "SE", - "SequenceVariant": "SK_SP_OSP", - "ScanOptions": "PFP", - "SequenceName": "_spcR_100", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS3D", "DIS2D", "SH", "FIL"], - "SeriesNumber": 5, - "AcquisitionTime": "12:34:55.172500", - "AcquisitionNumber": 1, - "SliceThickness": 0.8, - "SAR": 0.824703, - "EchoTime": 0.12, - "RepetitionTime": 1.5, - "FlipAngle": 120, - "PartialFourier": 1, - "BaseResolution": 320, - "ShimSetting": [ - 3232, - -11271, - 10164, - -164, - 485, - -369, - 146, - -10 ], - "TxRefAmp": 375.836, - "PhaseResolution": 1, - "PhaseOversampling": 0.8, - "ReceiveCoilName": "Spine_32", - "ReceiveCoilActiveElements": "HE3,4;NE1,2;SP1", - "CoilString": "HE3_4;NE1_2;SP1", - "PulseSequenceDetails": "%SiemensSeq%_tse_vfl", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 100, - "EchoTrainLength": 76, - "PhaseEncodingSteps": 422, - "AcquisitionMatrixPE": 320, - "ReconMatrixPE": 320, - "PixelBandwidth": 625, - "DwellTime": 2.5e-06, - "ImageOrientationPatientDICOM": [ - 0, - 1, - 0, - 0.0436194, - 0, - -0.999048 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181114 GCC5.4.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 123.258, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Skyra", + "InstitutionName": "MT_SINAI_MED_CTR_3T_SKYRA_RE_MR12", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "Madison_Avenue_1470_New_York_NYC_US_10029", + "DeviceSerialNumber": "45435", + "StationName": "AWP45435", + "BodyPartExamined": "CSPINE", + "PatientPosition": "HFS", + "ProcedureStepDescription": "RE_MRI_SPINE_CERVICAL_WITHOUT_CONTRAST", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "T2w", + "ProtocolName": "T2w", + "ScanningSequence": "SE", + "SequenceVariant": "SK_SP_OSP", + "ScanOptions": "PFP", + "SequenceName": "_spcR_100", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS3D", + "DIS2D", + "SH", + "FIL" + ], + "SeriesNumber": 5, + "AcquisitionTime": "12:34:55.172500", + "AcquisitionNumber": 1, + "SliceThickness": 0.8, + "SAR": 0.824703, + "EchoTime": 0.12, + "RepetitionTime": 1.5, + "FlipAngle": 120, + "PartialFourier": 1, + "BaseResolution": 320, + "ShimSetting": [ + 3232, + -11271, + 10164, + -164, + 485, + -369, + 146, + -10 + ], + "TxRefAmp": 375.836, + "PhaseResolution": 1, + "PhaseOversampling": 0.8, + "ReceiveCoilName": "Spine_32", + "ReceiveCoilActiveElements": "HE3,4;NE1,2;SP1", + "CoilString": "HE3_4;NE1_2;SP1", + "PulseSequenceDetails": "%SiemensSeq%_tse_vfl", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "EchoTrainLength": 76, + "PhaseEncodingSteps": 422, + "AcquisitionMatrixPE": 320, + "ReconMatrixPE": 320, + "PixelBandwidth": 625, + "DwellTime": 2.5e-06, + "ImageOrientationPatientDICOM": [ + 0, + 1, + 0, + 0.0436194, + 0, + -0.999048 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181114 GCC5.4.0", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-mountSinai05/anat/sub-mountSinai05_flip-1_mt-on_space-other_MTS.json b/derivatives/data_preprocessed/sub-mountSinai05/anat/sub-mountSinai05_flip-1_mt-on_space-other_MTS.json index 7de3141e19..645a3759c6 100644 --- a/derivatives/data_preprocessed/sub-mountSinai05/anat/sub-mountSinai05_flip-1_mt-on_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-mountSinai05/anat/sub-mountSinai05_flip-1_mt-on_space-other_MTS.json @@ -1,66 +1,77 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.258, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Skyra", - "InstitutionName": "MT_SINAI_MED_CTR_3T_SKYRA_RE_MR12", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "Madison_Avenue_1470_New_York_NYC_US_10029", - "DeviceSerialNumber": "45435", - "StationName": "AWP45435", - "BodyPartExamined": "CSPINE", - "PatientPosition": "HFS", - "ProcedureStepDescription": "RE_MRI_SPINE_CERVICAL_WITHOUT_CONTRAST", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-MT1", - "ProtocolName": "GRE-MT1", - "ScanningSequence": "GR", - "SequenceVariant": "MTC_SP", - "ScanOptions": "MT", - "SequenceName": "_fl3d1", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS2D"], - "SeriesNumber": 7, - "AcquisitionTime": "14:02:45.195000", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SAR": 0.814763, - "EchoTime": 0.00313, - "RepetitionTime": 0.035, - "FlipAngle": 9, - "PartialFourier": 1, - "BaseResolution": 256, - "ShimSetting": [ - 3168, - -11226, - 10564, - -1916, - 539, - 3553, - 1396, - -776 ], - "TxRefAmp": 407.515, - "PhaseResolution": 1, - "ReceiveCoilName": "HeadNeck_20", - "ReceiveCoilActiveElements": "HE3,4;NE1,2", - "CoilString": "HE3_4;NE1_2", - "PulseSequenceDetails": "%SiemensSeq%_gre", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 100, - "PhaseEncodingSteps": 255, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 256, - "PixelBandwidth": 260, - "DwellTime": 7.5e-06, - "ImageOrientationPatientDICOM": [ - 0.999963, - 0.00158211, - -0.00842959, - 1.65298e-08, - 0.982839, - 0.184466 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181114 GCC5.4.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 123.258, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Skyra", + "InstitutionName": "MT_SINAI_MED_CTR_3T_SKYRA_RE_MR12", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "Madison_Avenue_1470_New_York_NYC_US_10029", + "DeviceSerialNumber": "45435", + "StationName": "AWP45435", + "BodyPartExamined": "CSPINE", + "PatientPosition": "HFS", + "ProcedureStepDescription": "RE_MRI_SPINE_CERVICAL_WITHOUT_CONTRAST", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-MT1", + "ProtocolName": "GRE-MT1", + "ScanningSequence": "GR", + "SequenceVariant": "MTC_SP", + "ScanOptions": "MT", + "SequenceName": "_fl3d1", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS2D" + ], + "SeriesNumber": 7, + "AcquisitionTime": "14:02:45.195000", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SAR": 0.814763, + "EchoTime": 0.00313, + "RepetitionTime": 0.035, + "FlipAngle": 9, + "PartialFourier": 1, + "BaseResolution": 256, + "ShimSetting": [ + 3168, + -11226, + 10564, + -1916, + 539, + 3553, + 1396, + -776 + ], + "TxRefAmp": 407.515, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_20", + "ReceiveCoilActiveElements": "HE3,4;NE1,2", + "CoilString": "HE3_4;NE1_2", + "PulseSequenceDetails": "%SiemensSeq%_gre", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 255, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "PixelBandwidth": 260, + "DwellTime": 7.5e-06, + "ImageOrientationPatientDICOM": [ + 0.999963, + 0.00158211, + -0.00842959, + 1.65298e-08, + 0.982839, + 0.184466 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181114 GCC5.4.0", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-mountSinai05/anat/sub-mountSinai05_flip-2_mt-off_space-other_MTS.json b/derivatives/data_preprocessed/sub-mountSinai05/anat/sub-mountSinai05_flip-2_mt-off_space-other_MTS.json index 3282b8e38d..c722ca068c 100644 --- a/derivatives/data_preprocessed/sub-mountSinai05/anat/sub-mountSinai05_flip-2_mt-off_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-mountSinai05/anat/sub-mountSinai05_flip-2_mt-off_space-other_MTS.json @@ -1,65 +1,76 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.258, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Skyra", - "InstitutionName": "MT_SINAI_MED_CTR_3T_SKYRA_RE_MR12", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "Madison_Avenue_1470_New_York_NYC_US_10029", - "DeviceSerialNumber": "45435", - "StationName": "AWP45435", - "BodyPartExamined": "CSPINE", - "PatientPosition": "HFS", - "ProcedureStepDescription": "RE_MRI_SPINE_CERVICAL_WITHOUT_CONTRAST", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-T1w", - "ProtocolName": "GRE-T1w", - "ScanningSequence": "GR", - "SequenceVariant": "SP", - "SequenceName": "_fl3d1", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS2D"], - "SeriesNumber": 9, - "AcquisitionTime": "14:07:11.072500", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SAR": 0.0528267, - "EchoTime": 0.00313, - "RepetitionTime": 0.015, - "FlipAngle": 15, - "PartialFourier": 1, - "BaseResolution": 256, - "ShimSetting": [ - 3168, - -11226, - 10564, - -1916, - 539, - 3553, - 1396, - -776 ], - "TxRefAmp": 407.515, - "PhaseResolution": 1, - "ReceiveCoilName": "HeadNeck_20", - "ReceiveCoilActiveElements": "HE3,4;NE1,2", - "CoilString": "HE3_4;NE1_2", - "PulseSequenceDetails": "%SiemensSeq%_gre", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 100, - "PhaseEncodingSteps": 255, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 256, - "PixelBandwidth": 260, - "DwellTime": 7.5e-06, - "ImageOrientationPatientDICOM": [ - 0.999963, - 0.00158211, - -0.00842959, - 1.65298e-08, - 0.982839, - 0.184466 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181114 GCC5.4.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 123.258, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Skyra", + "InstitutionName": "MT_SINAI_MED_CTR_3T_SKYRA_RE_MR12", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "Madison_Avenue_1470_New_York_NYC_US_10029", + "DeviceSerialNumber": "45435", + "StationName": "AWP45435", + "BodyPartExamined": "CSPINE", + "PatientPosition": "HFS", + "ProcedureStepDescription": "RE_MRI_SPINE_CERVICAL_WITHOUT_CONTRAST", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-T1w", + "ProtocolName": "GRE-T1w", + "ScanningSequence": "GR", + "SequenceVariant": "SP", + "SequenceName": "_fl3d1", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS2D" + ], + "SeriesNumber": 9, + "AcquisitionTime": "14:07:11.072500", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SAR": 0.0528267, + "EchoTime": 0.00313, + "RepetitionTime": 0.015, + "FlipAngle": 15, + "PartialFourier": 1, + "BaseResolution": 256, + "ShimSetting": [ + 3168, + -11226, + 10564, + -1916, + 539, + 3553, + 1396, + -776 + ], + "TxRefAmp": 407.515, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_20", + "ReceiveCoilActiveElements": "HE3,4;NE1,2", + "CoilString": "HE3_4;NE1_2", + "PulseSequenceDetails": "%SiemensSeq%_gre", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 255, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "PixelBandwidth": 260, + "DwellTime": 7.5e-06, + "ImageOrientationPatientDICOM": [ + 0.999963, + 0.00158211, + -0.00842959, + 1.65298e-08, + 0.982839, + 0.184466 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181114 GCC5.4.0", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-mountSinai05/anat/sub-mountSinai05_space-other_T1w.json b/derivatives/data_preprocessed/sub-mountSinai05/anat/sub-mountSinai05_space-other_T1w.json index 9474583b43..eb39d94699 100644 --- a/derivatives/data_preprocessed/sub-mountSinai05/anat/sub-mountSinai05_space-other_T1w.json +++ b/derivatives/data_preprocessed/sub-mountSinai05/anat/sub-mountSinai05_space-other_T1w.json @@ -1,67 +1,80 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.258, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Skyra", - "InstitutionName": "MT_SINAI_MED_CTR_3T_SKYRA_RE_MR12", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "Madison_Avenue_1470_New_York_NYC_US_10029", - "DeviceSerialNumber": "45435", - "StationName": "AWP45435", - "BodyPartExamined": "CSPINE", - "PatientPosition": "HFS", - "ProcedureStepDescription": "RE_MRI_SPINE_CERVICAL_WITHOUT_CONTRAST", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "T1w", - "ProtocolName": "T1w", - "ScanningSequence": "GR_IR", - "SequenceVariant": "SK_SP_MP", - "ScanOptions": "IR", - "SequenceName": "_tfl3d1_16", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS3D", "DIS2D"], - "SeriesNumber": 2, - "AcquisitionTime": "13:40:30.955000", - "AcquisitionNumber": 1, - "SliceThickness": 1, - "SAR": 0.0906445, - "EchoTime": 0.00372, - "RepetitionTime": 2, - "InversionTime": 1, - "FlipAngle": 9, - "PartialFourier": 1, - "BaseResolution": 320, - "ShimSetting": [ - 3232, - -11271, - 10164, - -164, - 485, - -369, - 146, - -10 ], - "TxRefAmp": 383.928, - "PhaseResolution": 1, - "ReceiveCoilName": "Spine_32", - "ReceiveCoilActiveElements": "HE1-4;NE1,2;SP1", - "CoilString": "HE1-4;NE1_2;SP1", - "PulseSequenceDetails": "%SiemensSeq%_tfl", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 81.25, - "PhaseEncodingSteps": 259, - "AcquisitionMatrixPE": 260, - "ReconMatrixPE": 320, - "PixelBandwidth": 150, - "DwellTime": 1.04e-05, - "ImageOrientationPatientDICOM": [ - 0, - 1, - 0, - -0.00872651, - 0, - -0.999962 ], - "InPlanePhaseEncodingDirectionDICOM": "ROW", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181114 GCC5.4.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 123.258, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Skyra", + "InstitutionName": "MT_SINAI_MED_CTR_3T_SKYRA_RE_MR12", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "Madison_Avenue_1470_New_York_NYC_US_10029", + "DeviceSerialNumber": "45435", + "StationName": "AWP45435", + "BodyPartExamined": "CSPINE", + "PatientPosition": "HFS", + "ProcedureStepDescription": "RE_MRI_SPINE_CERVICAL_WITHOUT_CONTRAST", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "T1w", + "ProtocolName": "T1w", + "ScanningSequence": "GR_IR", + "SequenceVariant": "SK_SP_MP", + "ScanOptions": "IR", + "SequenceName": "_tfl3d1_16", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS3D", + "DIS2D" + ], + "SeriesNumber": 2, + "AcquisitionTime": "13:40:30.955000", + "AcquisitionNumber": 1, + "SliceThickness": 1, + "SAR": 0.0906445, + "EchoTime": 0.00372, + "RepetitionTime": 2, + "InversionTime": 1, + "FlipAngle": 9, + "PartialFourier": 1, + "BaseResolution": 320, + "ShimSetting": [ + 3232, + -11271, + 10164, + -164, + 485, + -369, + 146, + -10 + ], + "TxRefAmp": 383.928, + "PhaseResolution": 1, + "ReceiveCoilName": "Spine_32", + "ReceiveCoilActiveElements": "HE1-4;NE1,2;SP1", + "CoilString": "HE1-4;NE1_2;SP1", + "PulseSequenceDetails": "%SiemensSeq%_tfl", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 81.25, + "PhaseEncodingSteps": 259, + "AcquisitionMatrixPE": 260, + "ReconMatrixPE": 320, + "PixelBandwidth": 150, + "DwellTime": 1.04e-05, + "ImageOrientationPatientDICOM": [ + 0, + 1, + 0, + -0.00872651, + 0, + -0.999962 + ], + "InPlanePhaseEncodingDirectionDICOM": "ROW", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181114 GCC5.4.0", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-mountSinai05/anat/sub-mountSinai05_space-other_T2star.json b/derivatives/data_preprocessed/sub-mountSinai05/anat/sub-mountSinai05_space-other_T2star.json index 6526716b9e..544537bade 100644 --- a/derivatives/data_preprocessed/sub-mountSinai05/anat/sub-mountSinai05_space-other_T2star.json +++ b/derivatives/data_preprocessed/sub-mountSinai05/anat/sub-mountSinai05_space-other_T2star.json @@ -75,5 +75,9 @@ "InPlanePhaseEncodingDirectionDICOM": "COL", "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20181114 GCC5.4.0", - "AcquisitionDuration": 285.0 + "AcquisitionDuration": 285.0, + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-mountSinai05/anat/sub-mountSinai05_space-other_T2w.json b/derivatives/data_preprocessed/sub-mountSinai05/anat/sub-mountSinai05_space-other_T2w.json index 5312d292b6..a307badd74 100644 --- a/derivatives/data_preprocessed/sub-mountSinai05/anat/sub-mountSinai05_space-other_T2w.json +++ b/derivatives/data_preprocessed/sub-mountSinai05/anat/sub-mountSinai05_space-other_T2w.json @@ -1,68 +1,83 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.258, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Skyra", - "InstitutionName": "MT_SINAI_MED_CTR_3T_SKYRA_RE_MR12", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "Madison_Avenue_1470_New_York_NYC_US_10029", - "DeviceSerialNumber": "45435", - "StationName": "AWP45435", - "BodyPartExamined": "CSPINE", - "PatientPosition": "HFS", - "ProcedureStepDescription": "RE_MRI_SPINE_CERVICAL_WITHOUT_CONTRAST", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "T2w", - "ProtocolName": "T2w", - "ScanningSequence": "SE", - "SequenceVariant": "SK_SP_OSP", - "ScanOptions": "PFP", - "SequenceName": "_spcR_100", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS3D", "DIS2D", "SH", "FIL"], - "SeriesNumber": 4, - "AcquisitionTime": "13:45:55.275000", - "AcquisitionNumber": 1, - "SliceThickness": 0.8, - "SAR": 0.864014, - "EchoTime": 0.12, - "RepetitionTime": 1.5, - "FlipAngle": 120, - "PartialFourier": 1, - "BaseResolution": 320, - "ShimSetting": [ - 3232, - -11271, - 10164, - -164, - 485, - -369, - 146, - -10 ], - "TxRefAmp": 416.492, - "PhaseResolution": 1, - "PhaseOversampling": 0.8, - "ReceiveCoilName": "Spine_32", - "ReceiveCoilActiveElements": "HE3,4;NE1,2;SP1", - "CoilString": "HE3_4;NE1_2;SP1", - "PulseSequenceDetails": "%SiemensSeq%_tse_vfl", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 100, - "EchoTrainLength": 76, - "PhaseEncodingSteps": 422, - "AcquisitionMatrixPE": 320, - "ReconMatrixPE": 320, - "PixelBandwidth": 625, - "DwellTime": 2.5e-06, - "ImageOrientationPatientDICOM": [ - 0, - 1, - 0, - -0.0296663, - 0, - -0.99956 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181114 GCC5.4.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 123.258, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Skyra", + "InstitutionName": "MT_SINAI_MED_CTR_3T_SKYRA_RE_MR12", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "Madison_Avenue_1470_New_York_NYC_US_10029", + "DeviceSerialNumber": "45435", + "StationName": "AWP45435", + "BodyPartExamined": "CSPINE", + "PatientPosition": "HFS", + "ProcedureStepDescription": "RE_MRI_SPINE_CERVICAL_WITHOUT_CONTRAST", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "T2w", + "ProtocolName": "T2w", + "ScanningSequence": "SE", + "SequenceVariant": "SK_SP_OSP", + "ScanOptions": "PFP", + "SequenceName": "_spcR_100", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS3D", + "DIS2D", + "SH", + "FIL" + ], + "SeriesNumber": 4, + "AcquisitionTime": "13:45:55.275000", + "AcquisitionNumber": 1, + "SliceThickness": 0.8, + "SAR": 0.864014, + "EchoTime": 0.12, + "RepetitionTime": 1.5, + "FlipAngle": 120, + "PartialFourier": 1, + "BaseResolution": 320, + "ShimSetting": [ + 3232, + -11271, + 10164, + -164, + 485, + -369, + 146, + -10 + ], + "TxRefAmp": 416.492, + "PhaseResolution": 1, + "PhaseOversampling": 0.8, + "ReceiveCoilName": "Spine_32", + "ReceiveCoilActiveElements": "HE3,4;NE1,2;SP1", + "CoilString": "HE3_4;NE1_2;SP1", + "PulseSequenceDetails": "%SiemensSeq%_tse_vfl", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "EchoTrainLength": 76, + "PhaseEncodingSteps": 422, + "AcquisitionMatrixPE": 320, + "ReconMatrixPE": 320, + "PixelBandwidth": 625, + "DwellTime": 2.5e-06, + "ImageOrientationPatientDICOM": [ + 0, + 1, + 0, + -0.0296663, + 0, + -0.99956 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181114 GCC5.4.0", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-mountSinai06/anat/sub-mountSinai06_flip-1_mt-on_space-other_MTS.json b/derivatives/data_preprocessed/sub-mountSinai06/anat/sub-mountSinai06_flip-1_mt-on_space-other_MTS.json index d6f081f45d..7a4918c09b 100644 --- a/derivatives/data_preprocessed/sub-mountSinai06/anat/sub-mountSinai06_flip-1_mt-on_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-mountSinai06/anat/sub-mountSinai06_flip-1_mt-on_space-other_MTS.json @@ -1,66 +1,77 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.258, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Skyra", - "InstitutionName": "MT_SINAI_MED_CTR_3T_SKYRA_RE_MR12", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "Madison_Avenue_1470_New_York_NYC_US_10029", - "DeviceSerialNumber": "45435", - "StationName": "AWP45435", - "BodyPartExamined": "CSPINE", - "PatientPosition": "HFS", - "ProcedureStepDescription": "RE_MRI_SPINE_CERVICAL_WITHOUT_CONTRAST", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-MT1", - "ProtocolName": "GRE-MT1", - "ScanningSequence": "GR", - "SequenceVariant": "MTC_SP", - "ScanOptions": "MT", - "SequenceName": "_fl3d1", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS2D"], - "SeriesNumber": 7, - "AcquisitionTime": "15:13:46.365000", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SAR": 0.855874, - "EchoTime": 0.00313, - "RepetitionTime": 0.035, - "FlipAngle": 9, - "PartialFourier": 1, - "BaseResolution": 256, - "ShimSetting": [ - 2825, - -11446, - 10134, - -2117, - 563, - 2470, - 4244, - -2330 ], - "TxRefAmp": 443.241, - "PhaseResolution": 1, - "ReceiveCoilName": "Spine_32", - "ReceiveCoilActiveElements": "HE3,4;NE1,2;SP1", - "CoilString": "HE3_4;NE1_2;SP1", - "PulseSequenceDetails": "%SiemensSeq%_gre", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 100, - "PhaseEncodingSteps": 255, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 256, - "PixelBandwidth": 260, - "DwellTime": 7.5e-06, - "ImageOrientationPatientDICOM": [ - 0.999999, - -0.000316582, - 0.00168583, - 5.33354e-09, - 0.982821, - 0.184561 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181114 GCC5.4.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 123.258, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Skyra", + "InstitutionName": "MT_SINAI_MED_CTR_3T_SKYRA_RE_MR12", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "Madison_Avenue_1470_New_York_NYC_US_10029", + "DeviceSerialNumber": "45435", + "StationName": "AWP45435", + "BodyPartExamined": "CSPINE", + "PatientPosition": "HFS", + "ProcedureStepDescription": "RE_MRI_SPINE_CERVICAL_WITHOUT_CONTRAST", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-MT1", + "ProtocolName": "GRE-MT1", + "ScanningSequence": "GR", + "SequenceVariant": "MTC_SP", + "ScanOptions": "MT", + "SequenceName": "_fl3d1", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS2D" + ], + "SeriesNumber": 7, + "AcquisitionTime": "15:13:46.365000", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SAR": 0.855874, + "EchoTime": 0.00313, + "RepetitionTime": 0.035, + "FlipAngle": 9, + "PartialFourier": 1, + "BaseResolution": 256, + "ShimSetting": [ + 2825, + -11446, + 10134, + -2117, + 563, + 2470, + 4244, + -2330 + ], + "TxRefAmp": 443.241, + "PhaseResolution": 1, + "ReceiveCoilName": "Spine_32", + "ReceiveCoilActiveElements": "HE3,4;NE1,2;SP1", + "CoilString": "HE3_4;NE1_2;SP1", + "PulseSequenceDetails": "%SiemensSeq%_gre", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 255, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "PixelBandwidth": 260, + "DwellTime": 7.5e-06, + "ImageOrientationPatientDICOM": [ + 0.999999, + -0.000316582, + 0.00168583, + 5.33354e-09, + 0.982821, + 0.184561 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181114 GCC5.4.0", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-mountSinai06/anat/sub-mountSinai06_flip-2_mt-off_space-other_MTS.json b/derivatives/data_preprocessed/sub-mountSinai06/anat/sub-mountSinai06_flip-2_mt-off_space-other_MTS.json index d0543073dc..ec0617be59 100644 --- a/derivatives/data_preprocessed/sub-mountSinai06/anat/sub-mountSinai06_flip-2_mt-off_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-mountSinai06/anat/sub-mountSinai06_flip-2_mt-off_space-other_MTS.json @@ -1,65 +1,76 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.258, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Skyra", - "InstitutionName": "MT_SINAI_MED_CTR_3T_SKYRA_RE_MR12", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "Madison_Avenue_1470_New_York_NYC_US_10029", - "DeviceSerialNumber": "45435", - "StationName": "AWP45435", - "BodyPartExamined": "CSPINE", - "PatientPosition": "HFS", - "ProcedureStepDescription": "RE_MRI_SPINE_CERVICAL_WITHOUT_CONTRAST", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-T1w", - "ProtocolName": "GRE-T1w", - "ScanningSequence": "GR", - "SequenceVariant": "SP", - "SequenceName": "_fl3d1", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS2D"], - "SeriesNumber": 9, - "AcquisitionTime": "15:18:11.995000", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SAR": 0.0554922, - "EchoTime": 0.00313, - "RepetitionTime": 0.015, - "FlipAngle": 15, - "PartialFourier": 1, - "BaseResolution": 256, - "ShimSetting": [ - 2825, - -11446, - 10134, - -2117, - 563, - 2470, - 4244, - -2330 ], - "TxRefAmp": 443.241, - "PhaseResolution": 1, - "ReceiveCoilName": "Spine_32", - "ReceiveCoilActiveElements": "HE3,4;NE1,2;SP1", - "CoilString": "HE3_4;NE1_2;SP1", - "PulseSequenceDetails": "%SiemensSeq%_gre", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 100, - "PhaseEncodingSteps": 255, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 256, - "PixelBandwidth": 260, - "DwellTime": 7.5e-06, - "ImageOrientationPatientDICOM": [ - 0.999999, - -0.000316582, - 0.00168583, - 5.33354e-09, - 0.982821, - 0.184561 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181114 GCC5.4.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 123.258, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Skyra", + "InstitutionName": "MT_SINAI_MED_CTR_3T_SKYRA_RE_MR12", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "Madison_Avenue_1470_New_York_NYC_US_10029", + "DeviceSerialNumber": "45435", + "StationName": "AWP45435", + "BodyPartExamined": "CSPINE", + "PatientPosition": "HFS", + "ProcedureStepDescription": "RE_MRI_SPINE_CERVICAL_WITHOUT_CONTRAST", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-T1w", + "ProtocolName": "GRE-T1w", + "ScanningSequence": "GR", + "SequenceVariant": "SP", + "SequenceName": "_fl3d1", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS2D" + ], + "SeriesNumber": 9, + "AcquisitionTime": "15:18:11.995000", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SAR": 0.0554922, + "EchoTime": 0.00313, + "RepetitionTime": 0.015, + "FlipAngle": 15, + "PartialFourier": 1, + "BaseResolution": 256, + "ShimSetting": [ + 2825, + -11446, + 10134, + -2117, + 563, + 2470, + 4244, + -2330 + ], + "TxRefAmp": 443.241, + "PhaseResolution": 1, + "ReceiveCoilName": "Spine_32", + "ReceiveCoilActiveElements": "HE3,4;NE1,2;SP1", + "CoilString": "HE3_4;NE1_2;SP1", + "PulseSequenceDetails": "%SiemensSeq%_gre", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 255, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "PixelBandwidth": 260, + "DwellTime": 7.5e-06, + "ImageOrientationPatientDICOM": [ + 0.999999, + -0.000316582, + 0.00168583, + 5.33354e-09, + 0.982821, + 0.184561 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181114 GCC5.4.0", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-mountSinai06/anat/sub-mountSinai06_space-other_T1w.json b/derivatives/data_preprocessed/sub-mountSinai06/anat/sub-mountSinai06_space-other_T1w.json index 2b0b568d17..0c460d677a 100644 --- a/derivatives/data_preprocessed/sub-mountSinai06/anat/sub-mountSinai06_space-other_T1w.json +++ b/derivatives/data_preprocessed/sub-mountSinai06/anat/sub-mountSinai06_space-other_T1w.json @@ -1,67 +1,80 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.258, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Skyra", - "InstitutionName": "MT_SINAI_MED_CTR_3T_SKYRA_RE_MR12", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "Madison_Avenue_1470_New_York_NYC_US_10029", - "DeviceSerialNumber": "45435", - "StationName": "AWP45435", - "BodyPartExamined": "CSPINE", - "PatientPosition": "HFS", - "ProcedureStepDescription": "RE_MRI_SPINE_CERVICAL_WITHOUT_CONTRAST", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "T1w", - "ProtocolName": "T1w", - "ScanningSequence": "GR_IR", - "SequenceVariant": "SK_SP_MP", - "ScanOptions": "IR", - "SequenceName": "_tfl3d1_16", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS3D", "DIS2D"], - "SeriesNumber": 2, - "AcquisitionTime": "14:51:2.327500", - "AcquisitionNumber": 1, - "SliceThickness": 1, - "SAR": 0.0876608, - "EchoTime": 0.00372, - "RepetitionTime": 2, - "InversionTime": 1, - "FlipAngle": 9, - "PartialFourier": 1, - "BaseResolution": 320, - "ShimSetting": [ - 3232, - -11271, - 10164, - -164, - 485, - -369, - 146, - -10 ], - "TxRefAmp": 398.295, - "PhaseResolution": 1, - "ReceiveCoilName": "Spine_32", - "ReceiveCoilActiveElements": "HE1-4;NE1,2;SP1", - "CoilString": "HE1-4;NE1_2;SP1", - "PulseSequenceDetails": "%SiemensSeq%_tfl", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 81.25, - "PhaseEncodingSteps": 259, - "AcquisitionMatrixPE": 260, - "ReconMatrixPE": 320, - "PixelBandwidth": 150, - "DwellTime": 1.04e-05, - "ImageOrientationPatientDICOM": [ - 0, - 1, - 0, - 0.00174528, - 0, - -0.999998 ], - "InPlanePhaseEncodingDirectionDICOM": "ROW", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181114 GCC5.4.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 123.258, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Skyra", + "InstitutionName": "MT_SINAI_MED_CTR_3T_SKYRA_RE_MR12", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "Madison_Avenue_1470_New_York_NYC_US_10029", + "DeviceSerialNumber": "45435", + "StationName": "AWP45435", + "BodyPartExamined": "CSPINE", + "PatientPosition": "HFS", + "ProcedureStepDescription": "RE_MRI_SPINE_CERVICAL_WITHOUT_CONTRAST", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "T1w", + "ProtocolName": "T1w", + "ScanningSequence": "GR_IR", + "SequenceVariant": "SK_SP_MP", + "ScanOptions": "IR", + "SequenceName": "_tfl3d1_16", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS3D", + "DIS2D" + ], + "SeriesNumber": 2, + "AcquisitionTime": "14:51:2.327500", + "AcquisitionNumber": 1, + "SliceThickness": 1, + "SAR": 0.0876608, + "EchoTime": 0.00372, + "RepetitionTime": 2, + "InversionTime": 1, + "FlipAngle": 9, + "PartialFourier": 1, + "BaseResolution": 320, + "ShimSetting": [ + 3232, + -11271, + 10164, + -164, + 485, + -369, + 146, + -10 + ], + "TxRefAmp": 398.295, + "PhaseResolution": 1, + "ReceiveCoilName": "Spine_32", + "ReceiveCoilActiveElements": "HE1-4;NE1,2;SP1", + "CoilString": "HE1-4;NE1_2;SP1", + "PulseSequenceDetails": "%SiemensSeq%_tfl", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 81.25, + "PhaseEncodingSteps": 259, + "AcquisitionMatrixPE": 260, + "ReconMatrixPE": 320, + "PixelBandwidth": 150, + "DwellTime": 1.04e-05, + "ImageOrientationPatientDICOM": [ + 0, + 1, + 0, + 0.00174528, + 0, + -0.999998 + ], + "InPlanePhaseEncodingDirectionDICOM": "ROW", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181114 GCC5.4.0", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-mountSinai06/anat/sub-mountSinai06_space-other_T2star.json b/derivatives/data_preprocessed/sub-mountSinai06/anat/sub-mountSinai06_space-other_T2star.json index d63b27d959..2ded352798 100644 --- a/derivatives/data_preprocessed/sub-mountSinai06/anat/sub-mountSinai06_space-other_T2star.json +++ b/derivatives/data_preprocessed/sub-mountSinai06/anat/sub-mountSinai06_space-other_T2star.json @@ -75,5 +75,9 @@ "InPlanePhaseEncodingDirectionDICOM": "COL", "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20181114 GCC5.4.0", - "AcquisitionDuration": 285.0 + "AcquisitionDuration": 285.0, + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-mountSinai06/anat/sub-mountSinai06_space-other_T2w.json b/derivatives/data_preprocessed/sub-mountSinai06/anat/sub-mountSinai06_space-other_T2w.json index 6e1c9888d8..cf83097d5a 100644 --- a/derivatives/data_preprocessed/sub-mountSinai06/anat/sub-mountSinai06_space-other_T2w.json +++ b/derivatives/data_preprocessed/sub-mountSinai06/anat/sub-mountSinai06_space-other_T2w.json @@ -1,68 +1,83 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.258, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Skyra", - "InstitutionName": "MT_SINAI_MED_CTR_3T_SKYRA_RE_MR12", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "Madison_Avenue_1470_New_York_NYC_US_10029", - "DeviceSerialNumber": "45435", - "StationName": "AWP45435", - "BodyPartExamined": "CSPINE", - "PatientPosition": "HFS", - "ProcedureStepDescription": "RE_MRI_SPINE_CERVICAL_WITHOUT_CONTRAST", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "T2w", - "ProtocolName": "T2w", - "ScanningSequence": "SE", - "SequenceVariant": "SK_SP_OSP", - "ScanOptions": "PFP", - "SequenceName": "_spcR_100", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS3D", "DIS2D", "SH", "FIL"], - "SeriesNumber": 4, - "AcquisitionTime": "14:56:17.975000", - "AcquisitionNumber": 1, - "SliceThickness": 0.8, - "SAR": 0.865343, - "EchoTime": 0.12, - "RepetitionTime": 1.5, - "FlipAngle": 120, - "PartialFourier": 1, - "BaseResolution": 320, - "ShimSetting": [ - 3232, - -11271, - 10164, - -164, - 485, - -369, - 146, - -10 ], - "TxRefAmp": 443.241, - "PhaseResolution": 1, - "PhaseOversampling": 0.8, - "ReceiveCoilName": "Spine_32", - "ReceiveCoilActiveElements": "HE3,4;NE1,2;SP1", - "CoilString": "HE3_4;NE1_2;SP1", - "PulseSequenceDetails": "%SiemensSeq%_tse_vfl", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 100, - "EchoTrainLength": 76, - "PhaseEncodingSteps": 422, - "AcquisitionMatrixPE": 320, - "ReconMatrixPE": 320, - "PixelBandwidth": 625, - "DwellTime": 2.5e-06, - "ImageOrientationPatientDICOM": [ - 0, - 1, - 0, - 0.0017453, - 0, - -0.999998 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181114 GCC5.4.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 123.258, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Skyra", + "InstitutionName": "MT_SINAI_MED_CTR_3T_SKYRA_RE_MR12", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "Madison_Avenue_1470_New_York_NYC_US_10029", + "DeviceSerialNumber": "45435", + "StationName": "AWP45435", + "BodyPartExamined": "CSPINE", + "PatientPosition": "HFS", + "ProcedureStepDescription": "RE_MRI_SPINE_CERVICAL_WITHOUT_CONTRAST", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "T2w", + "ProtocolName": "T2w", + "ScanningSequence": "SE", + "SequenceVariant": "SK_SP_OSP", + "ScanOptions": "PFP", + "SequenceName": "_spcR_100", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS3D", + "DIS2D", + "SH", + "FIL" + ], + "SeriesNumber": 4, + "AcquisitionTime": "14:56:17.975000", + "AcquisitionNumber": 1, + "SliceThickness": 0.8, + "SAR": 0.865343, + "EchoTime": 0.12, + "RepetitionTime": 1.5, + "FlipAngle": 120, + "PartialFourier": 1, + "BaseResolution": 320, + "ShimSetting": [ + 3232, + -11271, + 10164, + -164, + 485, + -369, + 146, + -10 + ], + "TxRefAmp": 443.241, + "PhaseResolution": 1, + "PhaseOversampling": 0.8, + "ReceiveCoilName": "Spine_32", + "ReceiveCoilActiveElements": "HE3,4;NE1,2;SP1", + "CoilString": "HE3_4;NE1_2;SP1", + "PulseSequenceDetails": "%SiemensSeq%_tse_vfl", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "EchoTrainLength": 76, + "PhaseEncodingSteps": 422, + "AcquisitionMatrixPE": 320, + "ReconMatrixPE": 320, + "PixelBandwidth": 625, + "DwellTime": 2.5e-06, + "ImageOrientationPatientDICOM": [ + 0, + 1, + 0, + 0.0017453, + 0, + -0.999998 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181114 GCC5.4.0", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-mpicbs01/anat/sub-mpicbs01_flip-1_mt-on_space-other_MTS.json b/derivatives/data_preprocessed/sub-mpicbs01/anat/sub-mpicbs01_flip-1_mt-on_space-other_MTS.json index 75fcfd28a2..bf47c33af9 100644 --- a/derivatives/data_preprocessed/sub-mpicbs01/anat/sub-mpicbs01_flip-1_mt-on_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-mpicbs01/anat/sub-mpicbs01_flip-1_mt-on_space-other_MTS.json @@ -1,65 +1,76 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma_fit", - "InstitutionName": "MPI_Leipzig", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "Stephanstrasse_1A_Leipzig_District_DE_04103", - "DeviceSerialNumber": "67037", - "StationName": "TRIOSYS", - "BodyPartExamined": "HEADNECK", - "PatientPosition": "HFS", - "ProcedureStepDescription": "FE_SpinalCordMRI_new", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-MT1", - "ProtocolName": "GRE-MT1", - "ScanningSequence": "GR", - "SequenceVariant": "MTC_SP", - "ScanOptions": "MT", - "SequenceName": "_fl3d1", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS2D"], - "SeriesNumber": 5, - "AcquisitionTime": "16:24:17.930000", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SAR": 0.486767, - "EchoTime": 0.00313, - "RepetitionTime": 0.035, - "FlipAngle": 9, - "PartialFourier": 1, - "BaseResolution": 256, - "ShimSetting": [ - -5306, - -9048, - -4849, - -1718, - 399, - 2942, - -1060, - -116 ], - "TxRefAmp": 256.283, - "PhaseResolution": 1, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC5-7;NC1,2", - "PulseSequenceDetails": "%SiemensSeq%_gre", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 100, - "PhaseEncodingSteps": 255, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 256, - "ParallelReductionFactorInPlane": 2, - "PixelBandwidth": 260, - "DwellTime": 7.5e-06, - "ImageOrientationPatientDICOM": [ - 0.998355, - 0.00510524, - -0.0571084, - 1.06519e-08, - 0.996028, - 0.0890408 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 GCC4.9.2" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma_fit", + "InstitutionName": "MPI_Leipzig", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "Stephanstrasse_1A_Leipzig_District_DE_04103", + "DeviceSerialNumber": "67037", + "StationName": "TRIOSYS", + "BodyPartExamined": "HEADNECK", + "PatientPosition": "HFS", + "ProcedureStepDescription": "FE_SpinalCordMRI_new", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-MT1", + "ProtocolName": "GRE-MT1", + "ScanningSequence": "GR", + "SequenceVariant": "MTC_SP", + "ScanOptions": "MT", + "SequenceName": "_fl3d1", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS2D" + ], + "SeriesNumber": 5, + "AcquisitionTime": "16:24:17.930000", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SAR": 0.486767, + "EchoTime": 0.00313, + "RepetitionTime": 0.035, + "FlipAngle": 9, + "PartialFourier": 1, + "BaseResolution": 256, + "ShimSetting": [ + -5306, + -9048, + -4849, + -1718, + 399, + 2942, + -1060, + -116 + ], + "TxRefAmp": 256.283, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC5-7;NC1,2", + "PulseSequenceDetails": "%SiemensSeq%_gre", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 255, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "ParallelReductionFactorInPlane": 2, + "PixelBandwidth": 260, + "DwellTime": 7.5e-06, + "ImageOrientationPatientDICOM": [ + 0.998355, + 0.00510524, + -0.0571084, + 1.06519e-08, + 0.996028, + 0.0890408 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 GCC4.9.2", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-mpicbs01/anat/sub-mpicbs01_flip-2_mt-off_space-other_MTS.json b/derivatives/data_preprocessed/sub-mpicbs01/anat/sub-mpicbs01_flip-2_mt-off_space-other_MTS.json index 5df074e4c9..c27d0c0ada 100644 --- a/derivatives/data_preprocessed/sub-mpicbs01/anat/sub-mpicbs01_flip-2_mt-off_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-mpicbs01/anat/sub-mpicbs01_flip-2_mt-off_space-other_MTS.json @@ -1,64 +1,75 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma_fit", - "InstitutionName": "MPI_Leipzig", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "Stephanstrasse_1A_Leipzig_District_DE_04103", - "DeviceSerialNumber": "67037", - "StationName": "TRIOSYS", - "BodyPartExamined": "HEADNECK", - "PatientPosition": "HFS", - "ProcedureStepDescription": "FE_SpinalCordMRI_new", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-T1w", - "ProtocolName": "GRE-T1w", - "ScanningSequence": "GR", - "SequenceVariant": "SP", - "SequenceName": "_fl3d1", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS2D"], - "SeriesNumber": 7, - "AcquisitionTime": "16:28:42.957500", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SAR": 0.0315605, - "EchoTime": 0.00313, - "RepetitionTime": 0.015, - "FlipAngle": 15, - "PartialFourier": 1, - "BaseResolution": 256, - "ShimSetting": [ - -5306, - -9048, - -4849, - -1718, - 399, - 2942, - -1060, - -116 ], - "TxRefAmp": 256.283, - "PhaseResolution": 1, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC5-7;NC1,2", - "PulseSequenceDetails": "%SiemensSeq%_gre", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 100, - "PhaseEncodingSteps": 255, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 256, - "ParallelReductionFactorInPlane": 2, - "PixelBandwidth": 260, - "DwellTime": 7.5e-06, - "ImageOrientationPatientDICOM": [ - 0.998355, - 0.00510524, - -0.0571084, - 1.06519e-08, - 0.996028, - 0.0890408 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 GCC4.9.2" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma_fit", + "InstitutionName": "MPI_Leipzig", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "Stephanstrasse_1A_Leipzig_District_DE_04103", + "DeviceSerialNumber": "67037", + "StationName": "TRIOSYS", + "BodyPartExamined": "HEADNECK", + "PatientPosition": "HFS", + "ProcedureStepDescription": "FE_SpinalCordMRI_new", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-T1w", + "ProtocolName": "GRE-T1w", + "ScanningSequence": "GR", + "SequenceVariant": "SP", + "SequenceName": "_fl3d1", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS2D" + ], + "SeriesNumber": 7, + "AcquisitionTime": "16:28:42.957500", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SAR": 0.0315605, + "EchoTime": 0.00313, + "RepetitionTime": 0.015, + "FlipAngle": 15, + "PartialFourier": 1, + "BaseResolution": 256, + "ShimSetting": [ + -5306, + -9048, + -4849, + -1718, + 399, + 2942, + -1060, + -116 + ], + "TxRefAmp": 256.283, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC5-7;NC1,2", + "PulseSequenceDetails": "%SiemensSeq%_gre", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 255, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "ParallelReductionFactorInPlane": 2, + "PixelBandwidth": 260, + "DwellTime": 7.5e-06, + "ImageOrientationPatientDICOM": [ + 0.998355, + 0.00510524, + -0.0571084, + 1.06519e-08, + 0.996028, + 0.0890408 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 GCC4.9.2", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-mpicbs01/anat/sub-mpicbs01_space-other_T1w.json b/derivatives/data_preprocessed/sub-mpicbs01/anat/sub-mpicbs01_space-other_T1w.json index 87001f317c..3500757345 100644 --- a/derivatives/data_preprocessed/sub-mpicbs01/anat/sub-mpicbs01_space-other_T1w.json +++ b/derivatives/data_preprocessed/sub-mpicbs01/anat/sub-mpicbs01_space-other_T1w.json @@ -1,66 +1,79 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma_fit", - "InstitutionName": "MPI_Leipzig", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "Stephanstrasse_1A_Leipzig_District_DE_04103", - "DeviceSerialNumber": "67037", - "StationName": "TRIOSYS", - "BodyPartExamined": "HEADNECK", - "PatientPosition": "HFS", - "ProcedureStepDescription": "FE_SpinalCordMRI_new", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "T1w", - "ProtocolName": "T1w", - "ScanningSequence": "GR_IR", - "SequenceVariant": "SK_SP_MP", - "ScanOptions": "IR", - "SequenceName": "_tfl3d1_16", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS3D", "DIS2D"], - "SeriesNumber": 2, - "AcquisitionTime": "16:10:16.952500", - "AcquisitionNumber": 1, - "SliceThickness": 1, - "SAR": 0.0548416, - "EchoTime": 0.00372, - "RepetitionTime": 2, - "InversionTime": 1, - "FlipAngle": 9, - "PartialFourier": 1, - "BaseResolution": 320, - "ShimSetting": [ - -5296, - -9104, - -4764, - -51, - 51, - -26, - 73, - 24 ], - "TxRefAmp": 238.673, - "PhaseResolution": 1, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC1-7;NC1,2", - "PulseSequenceDetails": "%SiemensSeq%_tfl", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 81.25, - "PhaseEncodingSteps": 259, - "AcquisitionMatrixPE": 260, - "ReconMatrixPE": 320, - "ParallelReductionFactorInPlane": 2, - "PixelBandwidth": 150, - "DwellTime": 1.04e-05, - "ImageOrientationPatientDICOM": [ - 0, - 1, - 0, - -0.0279217, - 0, - -0.99961 ], - "InPlanePhaseEncodingDirectionDICOM": "ROW", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 GCC4.9.2" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma_fit", + "InstitutionName": "MPI_Leipzig", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "Stephanstrasse_1A_Leipzig_District_DE_04103", + "DeviceSerialNumber": "67037", + "StationName": "TRIOSYS", + "BodyPartExamined": "HEADNECK", + "PatientPosition": "HFS", + "ProcedureStepDescription": "FE_SpinalCordMRI_new", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "T1w", + "ProtocolName": "T1w", + "ScanningSequence": "GR_IR", + "SequenceVariant": "SK_SP_MP", + "ScanOptions": "IR", + "SequenceName": "_tfl3d1_16", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS3D", + "DIS2D" + ], + "SeriesNumber": 2, + "AcquisitionTime": "16:10:16.952500", + "AcquisitionNumber": 1, + "SliceThickness": 1, + "SAR": 0.0548416, + "EchoTime": 0.00372, + "RepetitionTime": 2, + "InversionTime": 1, + "FlipAngle": 9, + "PartialFourier": 1, + "BaseResolution": 320, + "ShimSetting": [ + -5296, + -9104, + -4764, + -51, + 51, + -26, + 73, + 24 + ], + "TxRefAmp": 238.673, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC1-7;NC1,2", + "PulseSequenceDetails": "%SiemensSeq%_tfl", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 81.25, + "PhaseEncodingSteps": 259, + "AcquisitionMatrixPE": 260, + "ReconMatrixPE": 320, + "ParallelReductionFactorInPlane": 2, + "PixelBandwidth": 150, + "DwellTime": 1.04e-05, + "ImageOrientationPatientDICOM": [ + 0, + 1, + 0, + -0.0279217, + 0, + -0.99961 + ], + "InPlanePhaseEncodingDirectionDICOM": "ROW", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 GCC4.9.2", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-mpicbs01/anat/sub-mpicbs01_space-other_T2star.json b/derivatives/data_preprocessed/sub-mpicbs01/anat/sub-mpicbs01_space-other_T2star.json index 6effef0ad5..addf617217 100644 --- a/derivatives/data_preprocessed/sub-mpicbs01/anat/sub-mpicbs01_space-other_T2star.json +++ b/derivatives/data_preprocessed/sub-mpicbs01/anat/sub-mpicbs01_space-other_T2star.json @@ -73,5 +73,9 @@ "InPlanePhaseEncodingDirectionDICOM": "COL", "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20180622 GCC4.9.2", - "AcquisitionDuration": 285.0 + "AcquisitionDuration": 285.0, + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-mpicbs01/anat/sub-mpicbs01_space-other_T2w.json b/derivatives/data_preprocessed/sub-mpicbs01/anat/sub-mpicbs01_space-other_T2w.json index 8cd31080c7..bc936a3702 100644 --- a/derivatives/data_preprocessed/sub-mpicbs01/anat/sub-mpicbs01_space-other_T2w.json +++ b/derivatives/data_preprocessed/sub-mpicbs01/anat/sub-mpicbs01_space-other_T2w.json @@ -1,67 +1,80 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma_fit", - "InstitutionName": "MPI_Leipzig", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "Stephanstrasse_1A_Leipzig_District_DE_04103", - "DeviceSerialNumber": "67037", - "StationName": "TRIOSYS", - "BodyPartExamined": "HEADNECK", - "PatientPosition": "HFS", - "ProcedureStepDescription": "FE_SpinalCordMRI_new", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "T2w", - "ProtocolName": "T2w", - "ScanningSequence": "SE", - "SequenceVariant": "SK_SP_OSP", - "ScanOptions": "PFP", - "SequenceName": "_spcR_100", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS3D", "DIS2D"], - "SeriesNumber": 3, - "AcquisitionTime": "16:16:39.160000", - "AcquisitionNumber": 1, - "SliceThickness": 0.8, - "SAR": 0.468942, - "EchoTime": 0.12, - "RepetitionTime": 1.5, - "FlipAngle": 120, - "PartialFourier": 1, - "BaseResolution": 320, - "ShimSetting": [ - -5272, - -9179, - -4804, - -311, - 146, - -114, - 801, - 11 ], - "TxRefAmp": 250.38, - "PhaseResolution": 1, - "PhaseOversampling": 0.8, - "ReceiveCoilName": "Spine_32", - "ReceiveCoilActiveElements": "HC3-7;NC1,2;SP1", - "PulseSequenceDetails": "%SiemensSeq%_tse_vfl", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 100, - "EchoTrainLength": 76, - "PhaseEncodingSteps": 422, - "AcquisitionMatrixPE": 320, - "ReconMatrixPE": 320, - "ParallelReductionFactorInPlane": 3, - "PixelBandwidth": 625, - "DwellTime": 2.5e-06, - "ImageOrientationPatientDICOM": [ - 2.05e-13, - 1, - 4.892e-12, - -0.0418756, - 4.897e-12, - -0.999123 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 GCC4.9.2" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma_fit", + "InstitutionName": "MPI_Leipzig", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "Stephanstrasse_1A_Leipzig_District_DE_04103", + "DeviceSerialNumber": "67037", + "StationName": "TRIOSYS", + "BodyPartExamined": "HEADNECK", + "PatientPosition": "HFS", + "ProcedureStepDescription": "FE_SpinalCordMRI_new", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "T2w", + "ProtocolName": "T2w", + "ScanningSequence": "SE", + "SequenceVariant": "SK_SP_OSP", + "ScanOptions": "PFP", + "SequenceName": "_spcR_100", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS3D", + "DIS2D" + ], + "SeriesNumber": 3, + "AcquisitionTime": "16:16:39.160000", + "AcquisitionNumber": 1, + "SliceThickness": 0.8, + "SAR": 0.468942, + "EchoTime": 0.12, + "RepetitionTime": 1.5, + "FlipAngle": 120, + "PartialFourier": 1, + "BaseResolution": 320, + "ShimSetting": [ + -5272, + -9179, + -4804, + -311, + 146, + -114, + 801, + 11 + ], + "TxRefAmp": 250.38, + "PhaseResolution": 1, + "PhaseOversampling": 0.8, + "ReceiveCoilName": "Spine_32", + "ReceiveCoilActiveElements": "HC3-7;NC1,2;SP1", + "PulseSequenceDetails": "%SiemensSeq%_tse_vfl", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "EchoTrainLength": 76, + "PhaseEncodingSteps": 422, + "AcquisitionMatrixPE": 320, + "ReconMatrixPE": 320, + "ParallelReductionFactorInPlane": 3, + "PixelBandwidth": 625, + "DwellTime": 2.5e-06, + "ImageOrientationPatientDICOM": [ + 2.05e-13, + 1, + 4.892e-12, + -0.0418756, + 4.897e-12, + -0.999123 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 GCC4.9.2", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-mpicbs02/anat/sub-mpicbs02_flip-1_mt-on_space-other_MTS.json b/derivatives/data_preprocessed/sub-mpicbs02/anat/sub-mpicbs02_flip-1_mt-on_space-other_MTS.json index 68397ab559..a7465e81f9 100644 --- a/derivatives/data_preprocessed/sub-mpicbs02/anat/sub-mpicbs02_flip-1_mt-on_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-mpicbs02/anat/sub-mpicbs02_flip-1_mt-on_space-other_MTS.json @@ -1,65 +1,76 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma_fit", - "InstitutionName": "MPI_Leipzig", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "Stephanstrasse_1A_Leipzig_District_DE_04103", - "DeviceSerialNumber": "67037", - "StationName": "TRIOSYS", - "BodyPartExamined": "HEADNECK", - "PatientPosition": "HFS", - "ProcedureStepDescription": "FE_Standard_Spinal", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-MT1", - "ProtocolName": "GRE-MT1", - "ScanningSequence": "GR", - "SequenceVariant": "MTC_SP", - "ScanOptions": "MT", - "SequenceName": "_fl3d1", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS2D"], - "SeriesNumber": 5, - "AcquisitionTime": "08:27:8.945000", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SAR": 0.59604, - "EchoTime": 0.00313, - "RepetitionTime": 0.035, - "FlipAngle": 9, - "PartialFourier": 1, - "BaseResolution": 256, - "ShimSetting": [ - -5292, - -9179, - -4981, - -880, - 79, - 635, - 575, - -189 ], - "TxRefAmp": 274.993, - "PhaseResolution": 1, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC5-7;NC1,2", - "PulseSequenceDetails": "%SiemensSeq%_gre", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 100, - "PhaseEncodingSteps": 255, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 256, - "ParallelReductionFactorInPlane": 2, - "PixelBandwidth": 260, - "DwellTime": 7.5e-06, - "ImageOrientationPatientDICOM": [ - 0.999573, - 0.00497785, - -0.0288064, - 6.8485e-08, - 0.985395, - 0.170282 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 GCC4.9.2" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma_fit", + "InstitutionName": "MPI_Leipzig", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "Stephanstrasse_1A_Leipzig_District_DE_04103", + "DeviceSerialNumber": "67037", + "StationName": "TRIOSYS", + "BodyPartExamined": "HEADNECK", + "PatientPosition": "HFS", + "ProcedureStepDescription": "FE_Standard_Spinal", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-MT1", + "ProtocolName": "GRE-MT1", + "ScanningSequence": "GR", + "SequenceVariant": "MTC_SP", + "ScanOptions": "MT", + "SequenceName": "_fl3d1", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS2D" + ], + "SeriesNumber": 5, + "AcquisitionTime": "08:27:8.945000", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SAR": 0.59604, + "EchoTime": 0.00313, + "RepetitionTime": 0.035, + "FlipAngle": 9, + "PartialFourier": 1, + "BaseResolution": 256, + "ShimSetting": [ + -5292, + -9179, + -4981, + -880, + 79, + 635, + 575, + -189 + ], + "TxRefAmp": 274.993, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC5-7;NC1,2", + "PulseSequenceDetails": "%SiemensSeq%_gre", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 255, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "ParallelReductionFactorInPlane": 2, + "PixelBandwidth": 260, + "DwellTime": 7.5e-06, + "ImageOrientationPatientDICOM": [ + 0.999573, + 0.00497785, + -0.0288064, + 6.8485e-08, + 0.985395, + 0.170282 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 GCC4.9.2", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-mpicbs02/anat/sub-mpicbs02_flip-2_mt-off_space-other_MTS.json b/derivatives/data_preprocessed/sub-mpicbs02/anat/sub-mpicbs02_flip-2_mt-off_space-other_MTS.json index a507ddf0ce..ca19281d78 100644 --- a/derivatives/data_preprocessed/sub-mpicbs02/anat/sub-mpicbs02_flip-2_mt-off_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-mpicbs02/anat/sub-mpicbs02_flip-2_mt-off_space-other_MTS.json @@ -1,64 +1,75 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma_fit", - "InstitutionName": "MPI_Leipzig", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "Stephanstrasse_1A_Leipzig_District_DE_04103", - "DeviceSerialNumber": "67037", - "StationName": "TRIOSYS", - "BodyPartExamined": "HEADNECK", - "PatientPosition": "HFS", - "ProcedureStepDescription": "FE_Standard_Spinal", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-T1w", - "ProtocolName": "GRE-T1w", - "ScanningSequence": "GR", - "SequenceVariant": "SP", - "SequenceName": "_fl3d1", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS2D"], - "SeriesNumber": 7, - "AcquisitionTime": "08:31:33.912500", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SAR": 0.0386454, - "EchoTime": 0.00313, - "RepetitionTime": 0.015, - "FlipAngle": 15, - "PartialFourier": 1, - "BaseResolution": 256, - "ShimSetting": [ - -5292, - -9179, - -4981, - -880, - 79, - 635, - 575, - -189 ], - "TxRefAmp": 274.993, - "PhaseResolution": 1, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC5-7;NC1,2", - "PulseSequenceDetails": "%SiemensSeq%_gre", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 100, - "PhaseEncodingSteps": 255, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 256, - "ParallelReductionFactorInPlane": 2, - "PixelBandwidth": 260, - "DwellTime": 7.5e-06, - "ImageOrientationPatientDICOM": [ - 0.999573, - 0.00497785, - -0.0288064, - 6.8485e-08, - 0.985395, - 0.170282 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 GCC4.9.2" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma_fit", + "InstitutionName": "MPI_Leipzig", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "Stephanstrasse_1A_Leipzig_District_DE_04103", + "DeviceSerialNumber": "67037", + "StationName": "TRIOSYS", + "BodyPartExamined": "HEADNECK", + "PatientPosition": "HFS", + "ProcedureStepDescription": "FE_Standard_Spinal", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-T1w", + "ProtocolName": "GRE-T1w", + "ScanningSequence": "GR", + "SequenceVariant": "SP", + "SequenceName": "_fl3d1", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS2D" + ], + "SeriesNumber": 7, + "AcquisitionTime": "08:31:33.912500", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SAR": 0.0386454, + "EchoTime": 0.00313, + "RepetitionTime": 0.015, + "FlipAngle": 15, + "PartialFourier": 1, + "BaseResolution": 256, + "ShimSetting": [ + -5292, + -9179, + -4981, + -880, + 79, + 635, + 575, + -189 + ], + "TxRefAmp": 274.993, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC5-7;NC1,2", + "PulseSequenceDetails": "%SiemensSeq%_gre", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 255, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "ParallelReductionFactorInPlane": 2, + "PixelBandwidth": 260, + "DwellTime": 7.5e-06, + "ImageOrientationPatientDICOM": [ + 0.999573, + 0.00497785, + -0.0288064, + 6.8485e-08, + 0.985395, + 0.170282 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 GCC4.9.2", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-mpicbs02/anat/sub-mpicbs02_space-other_T1w.json b/derivatives/data_preprocessed/sub-mpicbs02/anat/sub-mpicbs02_space-other_T1w.json index cfe2d65561..c48519dd2f 100644 --- a/derivatives/data_preprocessed/sub-mpicbs02/anat/sub-mpicbs02_space-other_T1w.json +++ b/derivatives/data_preprocessed/sub-mpicbs02/anat/sub-mpicbs02_space-other_T1w.json @@ -1,66 +1,79 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma_fit", - "InstitutionName": "MPI_Leipzig", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "Stephanstrasse_1A_Leipzig_District_DE_04103", - "DeviceSerialNumber": "67037", - "StationName": "TRIOSYS", - "BodyPartExamined": "HEADNECK", - "PatientPosition": "HFS", - "ProcedureStepDescription": "FE_Standard_Spinal", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "T1w", - "ProtocolName": "T1w", - "ScanningSequence": "GR_IR", - "SequenceVariant": "SK_SP_MP", - "ScanOptions": "IR", - "SequenceName": "_tfl3d1_16", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS3D", "DIS2D"], - "SeriesNumber": 2, - "AcquisitionTime": "08:13:51.695000", - "AcquisitionNumber": 1, - "SliceThickness": 1, - "SAR": 0.0679061, - "EchoTime": 0.00372, - "RepetitionTime": 2, - "InversionTime": 1, - "FlipAngle": 9, - "PartialFourier": 1, - "BaseResolution": 320, - "ShimSetting": [ - -5301, - -9040, - -4753, - 100, - 22, - 142, - 100, - 21 ], - "TxRefAmp": 256.552, - "PhaseResolution": 1, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC1-7;NC1,2", - "PulseSequenceDetails": "%SiemensSeq%_tfl", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 81.25, - "PhaseEncodingSteps": 259, - "AcquisitionMatrixPE": 260, - "ReconMatrixPE": 320, - "ParallelReductionFactorInPlane": 2, - "PixelBandwidth": 150, - "DwellTime": 1.04e-05, - "ImageOrientationPatientDICOM": [ - 0, - 1, - 0, - -0.026177, - 0, - -0.999657 ], - "InPlanePhaseEncodingDirectionDICOM": "ROW", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 GCC4.9.2" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma_fit", + "InstitutionName": "MPI_Leipzig", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "Stephanstrasse_1A_Leipzig_District_DE_04103", + "DeviceSerialNumber": "67037", + "StationName": "TRIOSYS", + "BodyPartExamined": "HEADNECK", + "PatientPosition": "HFS", + "ProcedureStepDescription": "FE_Standard_Spinal", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "T1w", + "ProtocolName": "T1w", + "ScanningSequence": "GR_IR", + "SequenceVariant": "SK_SP_MP", + "ScanOptions": "IR", + "SequenceName": "_tfl3d1_16", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS3D", + "DIS2D" + ], + "SeriesNumber": 2, + "AcquisitionTime": "08:13:51.695000", + "AcquisitionNumber": 1, + "SliceThickness": 1, + "SAR": 0.0679061, + "EchoTime": 0.00372, + "RepetitionTime": 2, + "InversionTime": 1, + "FlipAngle": 9, + "PartialFourier": 1, + "BaseResolution": 320, + "ShimSetting": [ + -5301, + -9040, + -4753, + 100, + 22, + 142, + 100, + 21 + ], + "TxRefAmp": 256.552, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC1-7;NC1,2", + "PulseSequenceDetails": "%SiemensSeq%_tfl", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 81.25, + "PhaseEncodingSteps": 259, + "AcquisitionMatrixPE": 260, + "ReconMatrixPE": 320, + "ParallelReductionFactorInPlane": 2, + "PixelBandwidth": 150, + "DwellTime": 1.04e-05, + "ImageOrientationPatientDICOM": [ + 0, + 1, + 0, + -0.026177, + 0, + -0.999657 + ], + "InPlanePhaseEncodingDirectionDICOM": "ROW", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 GCC4.9.2", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-mpicbs02/anat/sub-mpicbs02_space-other_T2star.json b/derivatives/data_preprocessed/sub-mpicbs02/anat/sub-mpicbs02_space-other_T2star.json index f5c2af102b..eb95264e91 100644 --- a/derivatives/data_preprocessed/sub-mpicbs02/anat/sub-mpicbs02_space-other_T2star.json +++ b/derivatives/data_preprocessed/sub-mpicbs02/anat/sub-mpicbs02_space-other_T2star.json @@ -73,5 +73,9 @@ "InPlanePhaseEncodingDirectionDICOM": "COL", "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20180622 GCC4.9.2", - "AcquisitionDuration": 285.0 + "AcquisitionDuration": 285.0, + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-mpicbs02/anat/sub-mpicbs02_space-other_T2w.json b/derivatives/data_preprocessed/sub-mpicbs02/anat/sub-mpicbs02_space-other_T2w.json index 08aa5eaf0a..e792d76f28 100644 --- a/derivatives/data_preprocessed/sub-mpicbs02/anat/sub-mpicbs02_space-other_T2w.json +++ b/derivatives/data_preprocessed/sub-mpicbs02/anat/sub-mpicbs02_space-other_T2w.json @@ -1,67 +1,80 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma_fit", - "InstitutionName": "MPI_Leipzig", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "Stephanstrasse_1A_Leipzig_District_DE_04103", - "DeviceSerialNumber": "67037", - "StationName": "TRIOSYS", - "BodyPartExamined": "HEADNECK", - "PatientPosition": "HFS", - "ProcedureStepDescription": "FE_Standard_Spinal", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "T2w", - "ProtocolName": "T2w", - "ScanningSequence": "SE", - "SequenceVariant": "SK_SP_OSP", - "ScanOptions": "PFP", - "SequenceName": "_spcR_100", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS3D", "DIS2D"], - "SeriesNumber": 3, - "AcquisitionTime": "08:19:27.942500", - "AcquisitionNumber": 1, - "SliceThickness": 0.8, - "SAR": 0.605342, - "EchoTime": 0.12, - "RepetitionTime": 1.5, - "FlipAngle": 120, - "PartialFourier": 1, - "BaseResolution": 320, - "ShimSetting": [ - -5239, - -9022, - -4851, - -307, - 152, - 120, - 749, - 9 ], - "TxRefAmp": 276.073, - "PhaseResolution": 1, - "PhaseOversampling": 0.8, - "ReceiveCoilName": "Spine_32", - "ReceiveCoilActiveElements": "HC5-7;NC1,2;SP1", - "PulseSequenceDetails": "%SiemensSeq%_tse_vfl", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 100, - "EchoTrainLength": 76, - "PhaseEncodingSteps": 422, - "AcquisitionMatrixPE": 320, - "ReconMatrixPE": 320, - "ParallelReductionFactorInPlane": 3, - "PixelBandwidth": 625, - "DwellTime": 2.5e-06, - "ImageOrientationPatientDICOM": [ - 1.71e-13, - 1, - 4.894e-12, - -0.0348994, - 4.897e-12, - -0.999391 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 GCC4.9.2" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma_fit", + "InstitutionName": "MPI_Leipzig", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "Stephanstrasse_1A_Leipzig_District_DE_04103", + "DeviceSerialNumber": "67037", + "StationName": "TRIOSYS", + "BodyPartExamined": "HEADNECK", + "PatientPosition": "HFS", + "ProcedureStepDescription": "FE_Standard_Spinal", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "T2w", + "ProtocolName": "T2w", + "ScanningSequence": "SE", + "SequenceVariant": "SK_SP_OSP", + "ScanOptions": "PFP", + "SequenceName": "_spcR_100", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS3D", + "DIS2D" + ], + "SeriesNumber": 3, + "AcquisitionTime": "08:19:27.942500", + "AcquisitionNumber": 1, + "SliceThickness": 0.8, + "SAR": 0.605342, + "EchoTime": 0.12, + "RepetitionTime": 1.5, + "FlipAngle": 120, + "PartialFourier": 1, + "BaseResolution": 320, + "ShimSetting": [ + -5239, + -9022, + -4851, + -307, + 152, + 120, + 749, + 9 + ], + "TxRefAmp": 276.073, + "PhaseResolution": 1, + "PhaseOversampling": 0.8, + "ReceiveCoilName": "Spine_32", + "ReceiveCoilActiveElements": "HC5-7;NC1,2;SP1", + "PulseSequenceDetails": "%SiemensSeq%_tse_vfl", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "EchoTrainLength": 76, + "PhaseEncodingSteps": 422, + "AcquisitionMatrixPE": 320, + "ReconMatrixPE": 320, + "ParallelReductionFactorInPlane": 3, + "PixelBandwidth": 625, + "DwellTime": 2.5e-06, + "ImageOrientationPatientDICOM": [ + 1.71e-13, + 1, + 4.894e-12, + -0.0348994, + 4.897e-12, + -0.999391 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 GCC4.9.2", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-mpicbs03/anat/sub-mpicbs03_flip-1_mt-on_space-other_MTS.json b/derivatives/data_preprocessed/sub-mpicbs03/anat/sub-mpicbs03_flip-1_mt-on_space-other_MTS.json index 0eabe3e683..67f35eabd8 100644 --- a/derivatives/data_preprocessed/sub-mpicbs03/anat/sub-mpicbs03_flip-1_mt-on_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-mpicbs03/anat/sub-mpicbs03_flip-1_mt-on_space-other_MTS.json @@ -1,65 +1,76 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma_fit", - "InstitutionName": "MPI_Leipzig", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "Stephanstrasse_1A_Leipzig_District_DE_04103", - "DeviceSerialNumber": "67037", - "StationName": "TRIOSYS", - "BodyPartExamined": "HEADNECK", - "PatientPosition": "HFS", - "ProcedureStepDescription": "FE_Standard_Spinal", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-MT1", - "ProtocolName": "GRE-MT1", - "ScanningSequence": "GR", - "SequenceVariant": "MTC_SP", - "ScanOptions": "MT", - "SequenceName": "_fl3d1", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS2D"], - "SeriesNumber": 5, - "AcquisitionTime": "09:17:50.947500", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SAR": 0.589693, - "EchoTime": 0.00313, - "RepetitionTime": 0.035, - "FlipAngle": 9, - "PartialFourier": 1, - "BaseResolution": 256, - "ShimSetting": [ - -5311, - -9170, - -4923, - -528, - 17, - 1, - 92, - -166 ], - "TxRefAmp": 290.068, - "PhaseResolution": 1, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC7;NC1,2", - "PulseSequenceDetails": "%SiemensSeq%_gre", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 100, - "PhaseEncodingSteps": 255, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 256, - "ParallelReductionFactorInPlane": 2, - "PixelBandwidth": 260, - "DwellTime": 7.5e-06, - "ImageOrientationPatientDICOM": [ - 1, - 0, - 0, - 0, - 0.997801, - 0.0662739 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 GCC4.9.2" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma_fit", + "InstitutionName": "MPI_Leipzig", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "Stephanstrasse_1A_Leipzig_District_DE_04103", + "DeviceSerialNumber": "67037", + "StationName": "TRIOSYS", + "BodyPartExamined": "HEADNECK", + "PatientPosition": "HFS", + "ProcedureStepDescription": "FE_Standard_Spinal", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-MT1", + "ProtocolName": "GRE-MT1", + "ScanningSequence": "GR", + "SequenceVariant": "MTC_SP", + "ScanOptions": "MT", + "SequenceName": "_fl3d1", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS2D" + ], + "SeriesNumber": 5, + "AcquisitionTime": "09:17:50.947500", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SAR": 0.589693, + "EchoTime": 0.00313, + "RepetitionTime": 0.035, + "FlipAngle": 9, + "PartialFourier": 1, + "BaseResolution": 256, + "ShimSetting": [ + -5311, + -9170, + -4923, + -528, + 17, + 1, + 92, + -166 + ], + "TxRefAmp": 290.068, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC7;NC1,2", + "PulseSequenceDetails": "%SiemensSeq%_gre", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 255, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "ParallelReductionFactorInPlane": 2, + "PixelBandwidth": 260, + "DwellTime": 7.5e-06, + "ImageOrientationPatientDICOM": [ + 1, + 0, + 0, + 0, + 0.997801, + 0.0662739 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 GCC4.9.2", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-mpicbs03/anat/sub-mpicbs03_flip-2_mt-off_space-other_MTS.json b/derivatives/data_preprocessed/sub-mpicbs03/anat/sub-mpicbs03_flip-2_mt-off_space-other_MTS.json index 37d1c539c5..ec0f683c6b 100644 --- a/derivatives/data_preprocessed/sub-mpicbs03/anat/sub-mpicbs03_flip-2_mt-off_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-mpicbs03/anat/sub-mpicbs03_flip-2_mt-off_space-other_MTS.json @@ -1,64 +1,75 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma_fit", - "InstitutionName": "MPI_Leipzig", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "Stephanstrasse_1A_Leipzig_District_DE_04103", - "DeviceSerialNumber": "67037", - "StationName": "TRIOSYS", - "BodyPartExamined": "HEADNECK", - "PatientPosition": "HFS", - "ProcedureStepDescription": "FE_Standard_Spinal", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-T1w", - "ProtocolName": "GRE-T1w", - "ScanningSequence": "GR", - "SequenceVariant": "SP", - "SequenceName": "_fl3d1", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS2D"], - "SeriesNumber": 7, - "AcquisitionTime": "09:22:16.947500", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SAR": 0.0382339, - "EchoTime": 0.00313, - "RepetitionTime": 0.015, - "FlipAngle": 15, - "PartialFourier": 1, - "BaseResolution": 256, - "ShimSetting": [ - -5311, - -9170, - -4923, - -528, - 17, - 1, - 92, - -166 ], - "TxRefAmp": 290.068, - "PhaseResolution": 1, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC7;NC1,2", - "PulseSequenceDetails": "%SiemensSeq%_gre", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 100, - "PhaseEncodingSteps": 255, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 256, - "ParallelReductionFactorInPlane": 2, - "PixelBandwidth": 260, - "DwellTime": 7.5e-06, - "ImageOrientationPatientDICOM": [ - 1, - 0, - 0, - 0, - 0.997801, - 0.0662739 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 GCC4.9.2" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma_fit", + "InstitutionName": "MPI_Leipzig", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "Stephanstrasse_1A_Leipzig_District_DE_04103", + "DeviceSerialNumber": "67037", + "StationName": "TRIOSYS", + "BodyPartExamined": "HEADNECK", + "PatientPosition": "HFS", + "ProcedureStepDescription": "FE_Standard_Spinal", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-T1w", + "ProtocolName": "GRE-T1w", + "ScanningSequence": "GR", + "SequenceVariant": "SP", + "SequenceName": "_fl3d1", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS2D" + ], + "SeriesNumber": 7, + "AcquisitionTime": "09:22:16.947500", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SAR": 0.0382339, + "EchoTime": 0.00313, + "RepetitionTime": 0.015, + "FlipAngle": 15, + "PartialFourier": 1, + "BaseResolution": 256, + "ShimSetting": [ + -5311, + -9170, + -4923, + -528, + 17, + 1, + 92, + -166 + ], + "TxRefAmp": 290.068, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC7;NC1,2", + "PulseSequenceDetails": "%SiemensSeq%_gre", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 255, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "ParallelReductionFactorInPlane": 2, + "PixelBandwidth": 260, + "DwellTime": 7.5e-06, + "ImageOrientationPatientDICOM": [ + 1, + 0, + 0, + 0, + 0.997801, + 0.0662739 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 GCC4.9.2", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-mpicbs03/anat/sub-mpicbs03_space-other_T1w.json b/derivatives/data_preprocessed/sub-mpicbs03/anat/sub-mpicbs03_space-other_T1w.json index 842d4d4cc2..76d0c092f6 100644 --- a/derivatives/data_preprocessed/sub-mpicbs03/anat/sub-mpicbs03_space-other_T1w.json +++ b/derivatives/data_preprocessed/sub-mpicbs03/anat/sub-mpicbs03_space-other_T1w.json @@ -1,66 +1,79 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma_fit", - "InstitutionName": "MPI_Leipzig", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "Stephanstrasse_1A_Leipzig_District_DE_04103", - "DeviceSerialNumber": "67037", - "StationName": "TRIOSYS", - "BodyPartExamined": "HEADNECK", - "PatientPosition": "HFS", - "ProcedureStepDescription": "FE_Standard_Spinal", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "T1w", - "ProtocolName": "T1w", - "ScanningSequence": "GR_IR", - "SequenceVariant": "SK_SP_MP", - "ScanOptions": "IR", - "SequenceName": "_tfl3d1_16", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS3D", "DIS2D"], - "SeriesNumber": 2, - "AcquisitionTime": "09:04:50.947500", - "AcquisitionNumber": 1, - "SliceThickness": 1, - "SAR": 0.0660137, - "EchoTime": 0.00372, - "RepetitionTime": 2, - "InversionTime": 1, - "FlipAngle": 9, - "PartialFourier": 1, - "BaseResolution": 320, - "ShimSetting": [ - -5308, - -9161, - -4698, - 0, - -29, - -104, - 15, - -11 ], - "TxRefAmp": 266.893, - "PhaseResolution": 1, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC1-7;NC1,2", - "PulseSequenceDetails": "%SiemensSeq%_tfl", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 81.25, - "PhaseEncodingSteps": 259, - "AcquisitionMatrixPE": 260, - "ReconMatrixPE": 320, - "ParallelReductionFactorInPlane": 2, - "PixelBandwidth": 150, - "DwellTime": 1.04e-05, - "ImageOrientationPatientDICOM": [ - 0, - 1, - 0, - 0, - 0, - -1 ], - "InPlanePhaseEncodingDirectionDICOM": "ROW", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 GCC4.9.2" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma_fit", + "InstitutionName": "MPI_Leipzig", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "Stephanstrasse_1A_Leipzig_District_DE_04103", + "DeviceSerialNumber": "67037", + "StationName": "TRIOSYS", + "BodyPartExamined": "HEADNECK", + "PatientPosition": "HFS", + "ProcedureStepDescription": "FE_Standard_Spinal", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "T1w", + "ProtocolName": "T1w", + "ScanningSequence": "GR_IR", + "SequenceVariant": "SK_SP_MP", + "ScanOptions": "IR", + "SequenceName": "_tfl3d1_16", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS3D", + "DIS2D" + ], + "SeriesNumber": 2, + "AcquisitionTime": "09:04:50.947500", + "AcquisitionNumber": 1, + "SliceThickness": 1, + "SAR": 0.0660137, + "EchoTime": 0.00372, + "RepetitionTime": 2, + "InversionTime": 1, + "FlipAngle": 9, + "PartialFourier": 1, + "BaseResolution": 320, + "ShimSetting": [ + -5308, + -9161, + -4698, + 0, + -29, + -104, + 15, + -11 + ], + "TxRefAmp": 266.893, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC1-7;NC1,2", + "PulseSequenceDetails": "%SiemensSeq%_tfl", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 81.25, + "PhaseEncodingSteps": 259, + "AcquisitionMatrixPE": 260, + "ReconMatrixPE": 320, + "ParallelReductionFactorInPlane": 2, + "PixelBandwidth": 150, + "DwellTime": 1.04e-05, + "ImageOrientationPatientDICOM": [ + 0, + 1, + 0, + 0, + 0, + -1 + ], + "InPlanePhaseEncodingDirectionDICOM": "ROW", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 GCC4.9.2", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-mpicbs03/anat/sub-mpicbs03_space-other_T2star.json b/derivatives/data_preprocessed/sub-mpicbs03/anat/sub-mpicbs03_space-other_T2star.json index af43f4d3e3..d0bdf83803 100644 --- a/derivatives/data_preprocessed/sub-mpicbs03/anat/sub-mpicbs03_space-other_T2star.json +++ b/derivatives/data_preprocessed/sub-mpicbs03/anat/sub-mpicbs03_space-other_T2star.json @@ -73,5 +73,9 @@ "InPlanePhaseEncodingDirectionDICOM": "COL", "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20180622 GCC4.9.2", - "AcquisitionDuration": 285.0 + "AcquisitionDuration": 285.0, + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-mpicbs03/anat/sub-mpicbs03_space-other_T2w.json b/derivatives/data_preprocessed/sub-mpicbs03/anat/sub-mpicbs03_space-other_T2w.json index 760dbf5e61..e681d269b8 100644 --- a/derivatives/data_preprocessed/sub-mpicbs03/anat/sub-mpicbs03_space-other_T2w.json +++ b/derivatives/data_preprocessed/sub-mpicbs03/anat/sub-mpicbs03_space-other_T2w.json @@ -1,67 +1,80 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma_fit", - "InstitutionName": "MPI_Leipzig", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "Stephanstrasse_1A_Leipzig_District_DE_04103", - "DeviceSerialNumber": "67037", - "StationName": "TRIOSYS", - "BodyPartExamined": "HEADNECK", - "PatientPosition": "HFS", - "ProcedureStepDescription": "FE_Standard_Spinal", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "T2w", - "ProtocolName": "T2w", - "ScanningSequence": "SE", - "SequenceVariant": "SK_SP_OSP", - "ScanOptions": "PFP", - "SequenceName": "_spcR_100", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS3D", "DIS2D"], - "SeriesNumber": 3, - "AcquisitionTime": "09:10:26.955000", - "AcquisitionNumber": 1, - "SliceThickness": 0.8, - "SAR": 0.607823, - "EchoTime": 0.12, - "RepetitionTime": 1.5, - "FlipAngle": 120, - "PartialFourier": 1, - "BaseResolution": 320, - "ShimSetting": [ - -5284, - -9176, - -4841, - -381, - 69, - -198, - 613, - 40 ], - "TxRefAmp": 293.106, - "PhaseResolution": 1, - "PhaseOversampling": 0.8, - "ReceiveCoilName": "Spine_32", - "ReceiveCoilActiveElements": "HC5-7;NC1,2;SP1", - "PulseSequenceDetails": "%SiemensSeq%_tse_vfl", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 100, - "EchoTrainLength": 76, - "PhaseEncodingSteps": 422, - "AcquisitionMatrixPE": 320, - "ReconMatrixPE": 320, - "ParallelReductionFactorInPlane": 3, - "PixelBandwidth": 625, - "DwellTime": 2.5e-06, - "ImageOrientationPatientDICOM": [ - 0, - 1, - 4.897e-12, - 0, - 4.897e-12, - -1 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 GCC4.9.2" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma_fit", + "InstitutionName": "MPI_Leipzig", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "Stephanstrasse_1A_Leipzig_District_DE_04103", + "DeviceSerialNumber": "67037", + "StationName": "TRIOSYS", + "BodyPartExamined": "HEADNECK", + "PatientPosition": "HFS", + "ProcedureStepDescription": "FE_Standard_Spinal", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "T2w", + "ProtocolName": "T2w", + "ScanningSequence": "SE", + "SequenceVariant": "SK_SP_OSP", + "ScanOptions": "PFP", + "SequenceName": "_spcR_100", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS3D", + "DIS2D" + ], + "SeriesNumber": 3, + "AcquisitionTime": "09:10:26.955000", + "AcquisitionNumber": 1, + "SliceThickness": 0.8, + "SAR": 0.607823, + "EchoTime": 0.12, + "RepetitionTime": 1.5, + "FlipAngle": 120, + "PartialFourier": 1, + "BaseResolution": 320, + "ShimSetting": [ + -5284, + -9176, + -4841, + -381, + 69, + -198, + 613, + 40 + ], + "TxRefAmp": 293.106, + "PhaseResolution": 1, + "PhaseOversampling": 0.8, + "ReceiveCoilName": "Spine_32", + "ReceiveCoilActiveElements": "HC5-7;NC1,2;SP1", + "PulseSequenceDetails": "%SiemensSeq%_tse_vfl", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "EchoTrainLength": 76, + "PhaseEncodingSteps": 422, + "AcquisitionMatrixPE": 320, + "ReconMatrixPE": 320, + "ParallelReductionFactorInPlane": 3, + "PixelBandwidth": 625, + "DwellTime": 2.5e-06, + "ImageOrientationPatientDICOM": [ + 0, + 1, + 4.897e-12, + 0, + 4.897e-12, + -1 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 GCC4.9.2", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-mpicbs05/anat/sub-mpicbs05_flip-1_mt-on_space-other_MTS.json b/derivatives/data_preprocessed/sub-mpicbs05/anat/sub-mpicbs05_flip-1_mt-on_space-other_MTS.json index 97258a5ada..aa55be5021 100644 --- a/derivatives/data_preprocessed/sub-mpicbs05/anat/sub-mpicbs05_flip-1_mt-on_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-mpicbs05/anat/sub-mpicbs05_flip-1_mt-on_space-other_MTS.json @@ -1,65 +1,76 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma_fit", - "InstitutionName": "MPI_CBS", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "Stephanstrasse_1A_Leipzig_District_DE_04103", - "DeviceSerialNumber": "67037", - "StationName": "TRIOSYS", - "BodyPartExamined": "BRAIN", - "PatientPosition": "HFS", - "ProcedureStepDescription": "FE_Standard_Spinal", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-MT1", - "ProtocolName": "GRE-MT1", - "ScanningSequence": "GR", - "SequenceVariant": "MTC_SP", - "ScanOptions": "MT", - "SequenceName": "_fl3d1", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS2D"], - "SeriesNumber": 5, - "AcquisitionTime": "10:30:28.995000", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SAR": 0.569947, - "EchoTime": 0.00313, - "RepetitionTime": 0.035, - "FlipAngle": 9, - "PartialFourier": 1, - "BaseResolution": 256, - "ShimSetting": [ - -5317, - -9187, - -5064, - -1167, - -43, - 749, - 163, - -34 ], - "TxRefAmp": 269.298, - "PhaseResolution": 1, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC7;NC1,2", - "PulseSequenceDetails": "%SiemensSeq%_gre", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 100, - "PhaseEncodingSteps": 255, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 256, - "ParallelReductionFactorInPlane": 2, - "PixelBandwidth": 260, - "DwellTime": 7.5e-06, - "ImageOrientationPatientDICOM": [ - 1, - 0, - 0, - 0, - 0.990983, - 0.133986 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 GCC4.9.2" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma_fit", + "InstitutionName": "MPI_CBS", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "Stephanstrasse_1A_Leipzig_District_DE_04103", + "DeviceSerialNumber": "67037", + "StationName": "TRIOSYS", + "BodyPartExamined": "BRAIN", + "PatientPosition": "HFS", + "ProcedureStepDescription": "FE_Standard_Spinal", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-MT1", + "ProtocolName": "GRE-MT1", + "ScanningSequence": "GR", + "SequenceVariant": "MTC_SP", + "ScanOptions": "MT", + "SequenceName": "_fl3d1", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS2D" + ], + "SeriesNumber": 5, + "AcquisitionTime": "10:30:28.995000", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SAR": 0.569947, + "EchoTime": 0.00313, + "RepetitionTime": 0.035, + "FlipAngle": 9, + "PartialFourier": 1, + "BaseResolution": 256, + "ShimSetting": [ + -5317, + -9187, + -5064, + -1167, + -43, + 749, + 163, + -34 + ], + "TxRefAmp": 269.298, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC7;NC1,2", + "PulseSequenceDetails": "%SiemensSeq%_gre", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 255, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "ParallelReductionFactorInPlane": 2, + "PixelBandwidth": 260, + "DwellTime": 7.5e-06, + "ImageOrientationPatientDICOM": [ + 1, + 0, + 0, + 0, + 0.990983, + 0.133986 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 GCC4.9.2", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-mpicbs05/anat/sub-mpicbs05_flip-2_mt-off_space-other_MTS.json b/derivatives/data_preprocessed/sub-mpicbs05/anat/sub-mpicbs05_flip-2_mt-off_space-other_MTS.json index 5f31944fa0..4f30bde22e 100644 --- a/derivatives/data_preprocessed/sub-mpicbs05/anat/sub-mpicbs05_flip-2_mt-off_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-mpicbs05/anat/sub-mpicbs05_flip-2_mt-off_space-other_MTS.json @@ -1,64 +1,75 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma_fit", - "InstitutionName": "MPI_CBS", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "Stephanstrasse_1A_Leipzig_District_DE_04103", - "DeviceSerialNumber": "67037", - "StationName": "TRIOSYS", - "BodyPartExamined": "BRAIN", - "PatientPosition": "HFS", - "ProcedureStepDescription": "FE_Standard_Spinal", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-T1w", - "ProtocolName": "GRE-T1w", - "ScanningSequence": "GR", - "SequenceVariant": "SP", - "SequenceName": "_fl3d1", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS2D"], - "SeriesNumber": 7, - "AcquisitionTime": "10:35:44.945000", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SAR": 0.0369536, - "EchoTime": 0.00313, - "RepetitionTime": 0.015, - "FlipAngle": 15, - "PartialFourier": 1, - "BaseResolution": 256, - "ShimSetting": [ - -5317, - -9187, - -5064, - -1167, - -43, - 749, - 163, - -34 ], - "TxRefAmp": 269.298, - "PhaseResolution": 1, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC7;NC1,2", - "PulseSequenceDetails": "%SiemensSeq%_gre", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 100, - "PhaseEncodingSteps": 255, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 256, - "ParallelReductionFactorInPlane": 2, - "PixelBandwidth": 260, - "DwellTime": 7.5e-06, - "ImageOrientationPatientDICOM": [ - 1, - 0, - 0, - 0, - 0.990983, - 0.133986 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 GCC4.9.2" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma_fit", + "InstitutionName": "MPI_CBS", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "Stephanstrasse_1A_Leipzig_District_DE_04103", + "DeviceSerialNumber": "67037", + "StationName": "TRIOSYS", + "BodyPartExamined": "BRAIN", + "PatientPosition": "HFS", + "ProcedureStepDescription": "FE_Standard_Spinal", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-T1w", + "ProtocolName": "GRE-T1w", + "ScanningSequence": "GR", + "SequenceVariant": "SP", + "SequenceName": "_fl3d1", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS2D" + ], + "SeriesNumber": 7, + "AcquisitionTime": "10:35:44.945000", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SAR": 0.0369536, + "EchoTime": 0.00313, + "RepetitionTime": 0.015, + "FlipAngle": 15, + "PartialFourier": 1, + "BaseResolution": 256, + "ShimSetting": [ + -5317, + -9187, + -5064, + -1167, + -43, + 749, + 163, + -34 + ], + "TxRefAmp": 269.298, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC7;NC1,2", + "PulseSequenceDetails": "%SiemensSeq%_gre", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 255, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "ParallelReductionFactorInPlane": 2, + "PixelBandwidth": 260, + "DwellTime": 7.5e-06, + "ImageOrientationPatientDICOM": [ + 1, + 0, + 0, + 0, + 0.990983, + 0.133986 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 GCC4.9.2", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-mpicbs05/anat/sub-mpicbs05_space-other_T1w.json b/derivatives/data_preprocessed/sub-mpicbs05/anat/sub-mpicbs05_space-other_T1w.json index 5278df7849..2cb45b1763 100644 --- a/derivatives/data_preprocessed/sub-mpicbs05/anat/sub-mpicbs05_space-other_T1w.json +++ b/derivatives/data_preprocessed/sub-mpicbs05/anat/sub-mpicbs05_space-other_T1w.json @@ -1,66 +1,79 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma_fit", - "InstitutionName": "MPI_CBS", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "Stephanstrasse_1A_Leipzig_District_DE_04103", - "DeviceSerialNumber": "67037", - "StationName": "TRIOSYS", - "BodyPartExamined": "BRAIN", - "PatientPosition": "HFS", - "ProcedureStepDescription": "FE_Standard_Spinal", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "T1w", - "ProtocolName": "T1w", - "ScanningSequence": "GR_IR", - "SequenceVariant": "SK_SP_MP", - "ScanOptions": "IR", - "SequenceName": "_tfl3d1_16", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS3D", "DIS2D"], - "SeriesNumber": 2, - "AcquisitionTime": "10:16:30.047500", - "AcquisitionNumber": 1, - "SliceThickness": 1, - "SAR": 0.0597508, - "EchoTime": 0.00372, - "RepetitionTime": 2, - "InversionTime": 1, - "FlipAngle": 9, - "PartialFourier": 1, - "BaseResolution": 320, - "ShimSetting": [ - -5308, - -9111, - -4756, - -27, - -19, - -57, - 129, - 0 ], - "TxRefAmp": 242.241, - "PhaseResolution": 1, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC1-7;NC1,2", - "PulseSequenceDetails": "%SiemensSeq%_tfl", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 81.25, - "PhaseEncodingSteps": 259, - "AcquisitionMatrixPE": 260, - "ReconMatrixPE": 320, - "ParallelReductionFactorInPlane": 2, - "PixelBandwidth": 150, - "DwellTime": 1.04e-05, - "ImageOrientationPatientDICOM": [ - 0, - 1, - 0, - 0, - 0, - -1 ], - "InPlanePhaseEncodingDirectionDICOM": "ROW", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 GCC4.9.2" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma_fit", + "InstitutionName": "MPI_CBS", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "Stephanstrasse_1A_Leipzig_District_DE_04103", + "DeviceSerialNumber": "67037", + "StationName": "TRIOSYS", + "BodyPartExamined": "BRAIN", + "PatientPosition": "HFS", + "ProcedureStepDescription": "FE_Standard_Spinal", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "T1w", + "ProtocolName": "T1w", + "ScanningSequence": "GR_IR", + "SequenceVariant": "SK_SP_MP", + "ScanOptions": "IR", + "SequenceName": "_tfl3d1_16", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS3D", + "DIS2D" + ], + "SeriesNumber": 2, + "AcquisitionTime": "10:16:30.047500", + "AcquisitionNumber": 1, + "SliceThickness": 1, + "SAR": 0.0597508, + "EchoTime": 0.00372, + "RepetitionTime": 2, + "InversionTime": 1, + "FlipAngle": 9, + "PartialFourier": 1, + "BaseResolution": 320, + "ShimSetting": [ + -5308, + -9111, + -4756, + -27, + -19, + -57, + 129, + 0 + ], + "TxRefAmp": 242.241, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC1-7;NC1,2", + "PulseSequenceDetails": "%SiemensSeq%_tfl", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 81.25, + "PhaseEncodingSteps": 259, + "AcquisitionMatrixPE": 260, + "ReconMatrixPE": 320, + "ParallelReductionFactorInPlane": 2, + "PixelBandwidth": 150, + "DwellTime": 1.04e-05, + "ImageOrientationPatientDICOM": [ + 0, + 1, + 0, + 0, + 0, + -1 + ], + "InPlanePhaseEncodingDirectionDICOM": "ROW", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 GCC4.9.2", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-mpicbs05/anat/sub-mpicbs05_space-other_T2star.json b/derivatives/data_preprocessed/sub-mpicbs05/anat/sub-mpicbs05_space-other_T2star.json index 5317e1da05..829f48e78c 100644 --- a/derivatives/data_preprocessed/sub-mpicbs05/anat/sub-mpicbs05_space-other_T2star.json +++ b/derivatives/data_preprocessed/sub-mpicbs05/anat/sub-mpicbs05_space-other_T2star.json @@ -73,5 +73,9 @@ "InPlanePhaseEncodingDirectionDICOM": "COL", "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20180622 GCC4.9.2", - "AcquisitionDuration": 285.0 + "AcquisitionDuration": 285.0, + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-mpicbs05/anat/sub-mpicbs05_space-other_T2w.json b/derivatives/data_preprocessed/sub-mpicbs05/anat/sub-mpicbs05_space-other_T2w.json index 96d9c6f9c8..b637a6dffa 100644 --- a/derivatives/data_preprocessed/sub-mpicbs05/anat/sub-mpicbs05_space-other_T2w.json +++ b/derivatives/data_preprocessed/sub-mpicbs05/anat/sub-mpicbs05_space-other_T2w.json @@ -1,67 +1,80 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma_fit", - "InstitutionName": "MPI_CBS", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "Stephanstrasse_1A_Leipzig_District_DE_04103", - "DeviceSerialNumber": "67037", - "StationName": "TRIOSYS", - "BodyPartExamined": "BRAIN", - "PatientPosition": "HFS", - "ProcedureStepDescription": "FE_Standard_Spinal", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "T2w", - "ProtocolName": "T2w", - "ScanningSequence": "SE", - "SequenceVariant": "SK_SP_OSP", - "ScanOptions": "PFP", - "SequenceName": "_spcR_100", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS3D", "DIS2D"], - "SeriesNumber": 3, - "AcquisitionTime": "10:22:13.120000", - "AcquisitionNumber": 1, - "SliceThickness": 0.8, - "SAR": 0.557428, - "EchoTime": 0.12, - "RepetitionTime": 1.5, - "FlipAngle": 120, - "PartialFourier": 1, - "BaseResolution": 320, - "ShimSetting": [ - -5271, - -9117, - -4980, - -624, - 68, - -80, - 793, - 10 ], - "TxRefAmp": 265.404, - "PhaseResolution": 1, - "PhaseOversampling": 0.8, - "ReceiveCoilName": "Spine_32", - "ReceiveCoilActiveElements": "HC5-7;NC1,2;SP1", - "PulseSequenceDetails": "%SiemensSeq%_tse_vfl", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 100, - "EchoTrainLength": 76, - "PhaseEncodingSteps": 422, - "AcquisitionMatrixPE": 320, - "ReconMatrixPE": 320, - "ParallelReductionFactorInPlane": 3, - "PixelBandwidth": 625, - "DwellTime": 2.5e-06, - "ImageOrientationPatientDICOM": [ - 0, - 1, - 4.897e-12, - 0, - 4.897e-12, - -1 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 GCC4.9.2" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma_fit", + "InstitutionName": "MPI_CBS", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "Stephanstrasse_1A_Leipzig_District_DE_04103", + "DeviceSerialNumber": "67037", + "StationName": "TRIOSYS", + "BodyPartExamined": "BRAIN", + "PatientPosition": "HFS", + "ProcedureStepDescription": "FE_Standard_Spinal", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "T2w", + "ProtocolName": "T2w", + "ScanningSequence": "SE", + "SequenceVariant": "SK_SP_OSP", + "ScanOptions": "PFP", + "SequenceName": "_spcR_100", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS3D", + "DIS2D" + ], + "SeriesNumber": 3, + "AcquisitionTime": "10:22:13.120000", + "AcquisitionNumber": 1, + "SliceThickness": 0.8, + "SAR": 0.557428, + "EchoTime": 0.12, + "RepetitionTime": 1.5, + "FlipAngle": 120, + "PartialFourier": 1, + "BaseResolution": 320, + "ShimSetting": [ + -5271, + -9117, + -4980, + -624, + 68, + -80, + 793, + 10 + ], + "TxRefAmp": 265.404, + "PhaseResolution": 1, + "PhaseOversampling": 0.8, + "ReceiveCoilName": "Spine_32", + "ReceiveCoilActiveElements": "HC5-7;NC1,2;SP1", + "PulseSequenceDetails": "%SiemensSeq%_tse_vfl", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "EchoTrainLength": 76, + "PhaseEncodingSteps": 422, + "AcquisitionMatrixPE": 320, + "ReconMatrixPE": 320, + "ParallelReductionFactorInPlane": 3, + "PixelBandwidth": 625, + "DwellTime": 2.5e-06, + "ImageOrientationPatientDICOM": [ + 0, + 1, + 4.897e-12, + 0, + 4.897e-12, + -1 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 GCC4.9.2", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-mpicbs06/anat/sub-mpicbs06_flip-1_mt-on_space-other_MTS.json b/derivatives/data_preprocessed/sub-mpicbs06/anat/sub-mpicbs06_flip-1_mt-on_space-other_MTS.json index 38616f3a8e..7d452b4501 100644 --- a/derivatives/data_preprocessed/sub-mpicbs06/anat/sub-mpicbs06_flip-1_mt-on_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-mpicbs06/anat/sub-mpicbs06_flip-1_mt-on_space-other_MTS.json @@ -1,65 +1,76 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma_fit", - "InstitutionName": "MPI_CBS", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "Stephanstrasse_1A_Leipzig_District_DE_04103", - "DeviceSerialNumber": "67037", - "StationName": "TRIOSYS", - "BodyPartExamined": "BRAIN", - "PatientPosition": "HFS", - "ProcedureStepDescription": "FE_Standard_Spinal", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-MT1", - "ProtocolName": "GRE-MT1", - "ScanningSequence": "GR", - "SequenceVariant": "MTC_SP", - "ScanOptions": "MT", - "SequenceName": "_fl3d1", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS2D"], - "SeriesNumber": 5, - "AcquisitionTime": "11:24:50.932500", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SAR": 0.715122, - "EchoTime": 0.00313, - "RepetitionTime": 0.035, - "FlipAngle": 9, - "PartialFourier": 1, - "BaseResolution": 256, - "ShimSetting": [ - -5287, - -9251, - -4822, - -672, - 161, - 331, - 207, - -281 ], - "TxRefAmp": 335.442, - "PhaseResolution": 1, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC5-7;NC1,2", - "PulseSequenceDetails": "%SiemensSeq%_gre", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 100, - "PhaseEncodingSteps": 255, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 256, - "ParallelReductionFactorInPlane": 2, - "PixelBandwidth": 260, - "DwellTime": 7.5e-06, - "ImageOrientationPatientDICOM": [ - 1, - 0, - 0, - 0, - 0.985109, - 0.171929 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 GCC4.9.2" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma_fit", + "InstitutionName": "MPI_CBS", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "Stephanstrasse_1A_Leipzig_District_DE_04103", + "DeviceSerialNumber": "67037", + "StationName": "TRIOSYS", + "BodyPartExamined": "BRAIN", + "PatientPosition": "HFS", + "ProcedureStepDescription": "FE_Standard_Spinal", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-MT1", + "ProtocolName": "GRE-MT1", + "ScanningSequence": "GR", + "SequenceVariant": "MTC_SP", + "ScanOptions": "MT", + "SequenceName": "_fl3d1", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS2D" + ], + "SeriesNumber": 5, + "AcquisitionTime": "11:24:50.932500", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SAR": 0.715122, + "EchoTime": 0.00313, + "RepetitionTime": 0.035, + "FlipAngle": 9, + "PartialFourier": 1, + "BaseResolution": 256, + "ShimSetting": [ + -5287, + -9251, + -4822, + -672, + 161, + 331, + 207, + -281 + ], + "TxRefAmp": 335.442, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC5-7;NC1,2", + "PulseSequenceDetails": "%SiemensSeq%_gre", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 255, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "ParallelReductionFactorInPlane": 2, + "PixelBandwidth": 260, + "DwellTime": 7.5e-06, + "ImageOrientationPatientDICOM": [ + 1, + 0, + 0, + 0, + 0.985109, + 0.171929 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 GCC4.9.2", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-mpicbs06/anat/sub-mpicbs06_flip-2_mt-off_space-other_MTS.json b/derivatives/data_preprocessed/sub-mpicbs06/anat/sub-mpicbs06_flip-2_mt-off_space-other_MTS.json index af3778334f..02ee0334b9 100644 --- a/derivatives/data_preprocessed/sub-mpicbs06/anat/sub-mpicbs06_flip-2_mt-off_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-mpicbs06/anat/sub-mpicbs06_flip-2_mt-off_space-other_MTS.json @@ -1,64 +1,75 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma_fit", - "InstitutionName": "MPI_CBS", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "Stephanstrasse_1A_Leipzig_District_DE_04103", - "DeviceSerialNumber": "67037", - "StationName": "TRIOSYS", - "BodyPartExamined": "BRAIN", - "PatientPosition": "HFS", - "ProcedureStepDescription": "FE_Standard_Spinal", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-T1w", - "ProtocolName": "GRE-T1w", - "ScanningSequence": "GR", - "SequenceVariant": "SP", - "SequenceName": "_fl3d1", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS2D"], - "SeriesNumber": 7, - "AcquisitionTime": "11:29:15.927500", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SAR": 0.0463663, - "EchoTime": 0.00313, - "RepetitionTime": 0.015, - "FlipAngle": 15, - "PartialFourier": 1, - "BaseResolution": 256, - "ShimSetting": [ - -5287, - -9251, - -4822, - -672, - 161, - 331, - 207, - -281 ], - "TxRefAmp": 335.442, - "PhaseResolution": 1, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC5-7;NC1,2", - "PulseSequenceDetails": "%SiemensSeq%_gre", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 100, - "PhaseEncodingSteps": 255, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 256, - "ParallelReductionFactorInPlane": 2, - "PixelBandwidth": 260, - "DwellTime": 7.5e-06, - "ImageOrientationPatientDICOM": [ - 1, - 0, - 0, - 0, - 0.985109, - 0.171929 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 GCC4.9.2" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma_fit", + "InstitutionName": "MPI_CBS", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "Stephanstrasse_1A_Leipzig_District_DE_04103", + "DeviceSerialNumber": "67037", + "StationName": "TRIOSYS", + "BodyPartExamined": "BRAIN", + "PatientPosition": "HFS", + "ProcedureStepDescription": "FE_Standard_Spinal", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-T1w", + "ProtocolName": "GRE-T1w", + "ScanningSequence": "GR", + "SequenceVariant": "SP", + "SequenceName": "_fl3d1", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS2D" + ], + "SeriesNumber": 7, + "AcquisitionTime": "11:29:15.927500", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SAR": 0.0463663, + "EchoTime": 0.00313, + "RepetitionTime": 0.015, + "FlipAngle": 15, + "PartialFourier": 1, + "BaseResolution": 256, + "ShimSetting": [ + -5287, + -9251, + -4822, + -672, + 161, + 331, + 207, + -281 + ], + "TxRefAmp": 335.442, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC5-7;NC1,2", + "PulseSequenceDetails": "%SiemensSeq%_gre", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 255, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "ParallelReductionFactorInPlane": 2, + "PixelBandwidth": 260, + "DwellTime": 7.5e-06, + "ImageOrientationPatientDICOM": [ + 1, + 0, + 0, + 0, + 0.985109, + 0.171929 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 GCC4.9.2", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-mpicbs06/anat/sub-mpicbs06_space-other_T1w.json b/derivatives/data_preprocessed/sub-mpicbs06/anat/sub-mpicbs06_space-other_T1w.json index ce390eca1d..b0ba84fab8 100644 --- a/derivatives/data_preprocessed/sub-mpicbs06/anat/sub-mpicbs06_space-other_T1w.json +++ b/derivatives/data_preprocessed/sub-mpicbs06/anat/sub-mpicbs06_space-other_T1w.json @@ -1,66 +1,79 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma_fit", - "InstitutionName": "MPI_CBS", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "Stephanstrasse_1A_Leipzig_District_DE_04103", - "DeviceSerialNumber": "67037", - "StationName": "TRIOSYS", - "BodyPartExamined": "BRAIN", - "PatientPosition": "HFS", - "ProcedureStepDescription": "FE_Standard_Spinal", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "T1w", - "ProtocolName": "T1w", - "ScanningSequence": "GR_IR", - "SequenceVariant": "SK_SP_MP", - "ScanOptions": "IR", - "SequenceName": "_tfl3d1_16", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS3D", "DIS2D"], - "SeriesNumber": 2, - "AcquisitionTime": "11:10:57.997500", - "AcquisitionNumber": 1, - "SliceThickness": 1, - "SAR": 0.0840473, - "EchoTime": 0.00372, - "RepetitionTime": 2, - "InversionTime": 1, - "FlipAngle": 9, - "PartialFourier": 1, - "BaseResolution": 320, - "ShimSetting": [ - -5307, - -9150, - -4715, - 0, - 21, - -119, - 98, - -68 ], - "TxRefAmp": 313.932, - "PhaseResolution": 1, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC1-7;NC1,2", - "PulseSequenceDetails": "%SiemensSeq%_tfl", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 81.25, - "PhaseEncodingSteps": 259, - "AcquisitionMatrixPE": 260, - "ReconMatrixPE": 320, - "ParallelReductionFactorInPlane": 2, - "PixelBandwidth": 150, - "DwellTime": 1.04e-05, - "ImageOrientationPatientDICOM": [ - 0, - 1, - 0, - -0.0174524, - 0, - -0.999848 ], - "InPlanePhaseEncodingDirectionDICOM": "ROW", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 GCC4.9.2" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma_fit", + "InstitutionName": "MPI_CBS", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "Stephanstrasse_1A_Leipzig_District_DE_04103", + "DeviceSerialNumber": "67037", + "StationName": "TRIOSYS", + "BodyPartExamined": "BRAIN", + "PatientPosition": "HFS", + "ProcedureStepDescription": "FE_Standard_Spinal", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "T1w", + "ProtocolName": "T1w", + "ScanningSequence": "GR_IR", + "SequenceVariant": "SK_SP_MP", + "ScanOptions": "IR", + "SequenceName": "_tfl3d1_16", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS3D", + "DIS2D" + ], + "SeriesNumber": 2, + "AcquisitionTime": "11:10:57.997500", + "AcquisitionNumber": 1, + "SliceThickness": 1, + "SAR": 0.0840473, + "EchoTime": 0.00372, + "RepetitionTime": 2, + "InversionTime": 1, + "FlipAngle": 9, + "PartialFourier": 1, + "BaseResolution": 320, + "ShimSetting": [ + -5307, + -9150, + -4715, + 0, + 21, + -119, + 98, + -68 + ], + "TxRefAmp": 313.932, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC1-7;NC1,2", + "PulseSequenceDetails": "%SiemensSeq%_tfl", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 81.25, + "PhaseEncodingSteps": 259, + "AcquisitionMatrixPE": 260, + "ReconMatrixPE": 320, + "ParallelReductionFactorInPlane": 2, + "PixelBandwidth": 150, + "DwellTime": 1.04e-05, + "ImageOrientationPatientDICOM": [ + 0, + 1, + 0, + -0.0174524, + 0, + -0.999848 + ], + "InPlanePhaseEncodingDirectionDICOM": "ROW", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 GCC4.9.2", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-mpicbs06/anat/sub-mpicbs06_space-other_T2star.json b/derivatives/data_preprocessed/sub-mpicbs06/anat/sub-mpicbs06_space-other_T2star.json index 207e0d0a8b..8196fdfb17 100644 --- a/derivatives/data_preprocessed/sub-mpicbs06/anat/sub-mpicbs06_space-other_T2star.json +++ b/derivatives/data_preprocessed/sub-mpicbs06/anat/sub-mpicbs06_space-other_T2star.json @@ -73,5 +73,9 @@ "InPlanePhaseEncodingDirectionDICOM": "COL", "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20180622 GCC4.9.2", - "AcquisitionDuration": 285.0 + "AcquisitionDuration": 285.0, + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-mpicbs06/anat/sub-mpicbs06_space-other_T2w.json b/derivatives/data_preprocessed/sub-mpicbs06/anat/sub-mpicbs06_space-other_T2w.json index 636fe7974a..c6ae552be8 100644 --- a/derivatives/data_preprocessed/sub-mpicbs06/anat/sub-mpicbs06_space-other_T2w.json +++ b/derivatives/data_preprocessed/sub-mpicbs06/anat/sub-mpicbs06_space-other_T2w.json @@ -1,67 +1,80 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma_fit", - "InstitutionName": "MPI_CBS", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "Stephanstrasse_1A_Leipzig_District_DE_04103", - "DeviceSerialNumber": "67037", - "StationName": "TRIOSYS", - "BodyPartExamined": "BRAIN", - "PatientPosition": "HFS", - "ProcedureStepDescription": "FE_Standard_Spinal", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "T2w", - "ProtocolName": "T2w", - "ScanningSequence": "SE", - "SequenceVariant": "SK_SP_OSP", - "ScanOptions": "PFP", - "SequenceName": "_spcR_100", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS3D", "DIS2D"], - "SeriesNumber": 3, - "AcquisitionTime": "11:16:50.980000", - "AcquisitionNumber": 1, - "SliceThickness": 0.8, - "SAR": 0.752331, - "EchoTime": 0.12, - "RepetitionTime": 1.5, - "FlipAngle": 120, - "PartialFourier": 1, - "BaseResolution": 320, - "ShimSetting": [ - -5270, - -9177, - -4797, - -328, - 186, - -156, - 855, - -6 ], - "TxRefAmp": 342.387, - "PhaseResolution": 1, - "PhaseOversampling": 0.8, - "ReceiveCoilName": "Spine_32", - "ReceiveCoilActiveElements": "HC5-7;NC1,2;SP1", - "PulseSequenceDetails": "%SiemensSeq%_tse_vfl", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 100, - "EchoTrainLength": 76, - "PhaseEncodingSteps": 422, - "AcquisitionMatrixPE": 320, - "ReconMatrixPE": 320, - "ParallelReductionFactorInPlane": 3, - "PixelBandwidth": 625, - "DwellTime": 2.5e-06, - "ImageOrientationPatientDICOM": [ - 8.5e-14, - 1, - 4.896e-12, - -0.0174524, - 4.897e-12, - -0.999848 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 GCC4.9.2" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma_fit", + "InstitutionName": "MPI_CBS", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "Stephanstrasse_1A_Leipzig_District_DE_04103", + "DeviceSerialNumber": "67037", + "StationName": "TRIOSYS", + "BodyPartExamined": "BRAIN", + "PatientPosition": "HFS", + "ProcedureStepDescription": "FE_Standard_Spinal", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "T2w", + "ProtocolName": "T2w", + "ScanningSequence": "SE", + "SequenceVariant": "SK_SP_OSP", + "ScanOptions": "PFP", + "SequenceName": "_spcR_100", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS3D", + "DIS2D" + ], + "SeriesNumber": 3, + "AcquisitionTime": "11:16:50.980000", + "AcquisitionNumber": 1, + "SliceThickness": 0.8, + "SAR": 0.752331, + "EchoTime": 0.12, + "RepetitionTime": 1.5, + "FlipAngle": 120, + "PartialFourier": 1, + "BaseResolution": 320, + "ShimSetting": [ + -5270, + -9177, + -4797, + -328, + 186, + -156, + 855, + -6 + ], + "TxRefAmp": 342.387, + "PhaseResolution": 1, + "PhaseOversampling": 0.8, + "ReceiveCoilName": "Spine_32", + "ReceiveCoilActiveElements": "HC5-7;NC1,2;SP1", + "PulseSequenceDetails": "%SiemensSeq%_tse_vfl", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "EchoTrainLength": 76, + "PhaseEncodingSteps": 422, + "AcquisitionMatrixPE": 320, + "ReconMatrixPE": 320, + "ParallelReductionFactorInPlane": 3, + "PixelBandwidth": 625, + "DwellTime": 2.5e-06, + "ImageOrientationPatientDICOM": [ + 8.5e-14, + 1, + 4.896e-12, + -0.0174524, + 4.897e-12, + -0.999848 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 GCC4.9.2", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-mpicbs07/anat/sub-mpicbs07_flip-1_mt-on_space-other_MTS.json b/derivatives/data_preprocessed/sub-mpicbs07/anat/sub-mpicbs07_flip-1_mt-on_space-other_MTS.json index dce6599ced..3eeb0f0a86 100644 --- a/derivatives/data_preprocessed/sub-mpicbs07/anat/sub-mpicbs07_flip-1_mt-on_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-mpicbs07/anat/sub-mpicbs07_flip-1_mt-on_space-other_MTS.json @@ -1,65 +1,76 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma_fit", - "InstitutionName": "MPI_CBS", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "Stephanstrasse_1A_Leipzig_District_DE_04103", - "DeviceSerialNumber": "67037", - "StationName": "TRIOSYS", - "BodyPartExamined": "BRAIN", - "PatientPosition": "HFS", - "ProcedureStepDescription": "FE_Standard_Spinal", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-MT1", - "ProtocolName": "GRE-MT1", - "ScanningSequence": "GR", - "SequenceVariant": "MTC_SP", - "ScanOptions": "MT", - "SequenceName": "_fl3d1", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS2D"], - "SeriesNumber": 5, - "AcquisitionTime": "12:24:42.945000", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SAR": 0.578898, - "EchoTime": 0.00313, - "RepetitionTime": 0.035, - "FlipAngle": 9, - "PartialFourier": 1, - "BaseResolution": 256, - "ShimSetting": [ - -5330, - -9235, - -4920, - -360, - -144, - 618, - 70, - 37 ], - "TxRefAmp": 298.476, - "PhaseResolution": 1, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC5,7;NC1,2", - "PulseSequenceDetails": "%SiemensSeq%_gre", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 100, - "PhaseEncodingSteps": 255, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 256, - "ParallelReductionFactorInPlane": 2, - "PixelBandwidth": 260, - "DwellTime": 7.5e-06, - "ImageOrientationPatientDICOM": [ - 0.99982, - -0.00283894, - 0.0187681, - 1.44522e-08, - 0.988752, - 0.149562 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 GCC4.9.2" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma_fit", + "InstitutionName": "MPI_CBS", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "Stephanstrasse_1A_Leipzig_District_DE_04103", + "DeviceSerialNumber": "67037", + "StationName": "TRIOSYS", + "BodyPartExamined": "BRAIN", + "PatientPosition": "HFS", + "ProcedureStepDescription": "FE_Standard_Spinal", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-MT1", + "ProtocolName": "GRE-MT1", + "ScanningSequence": "GR", + "SequenceVariant": "MTC_SP", + "ScanOptions": "MT", + "SequenceName": "_fl3d1", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS2D" + ], + "SeriesNumber": 5, + "AcquisitionTime": "12:24:42.945000", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SAR": 0.578898, + "EchoTime": 0.00313, + "RepetitionTime": 0.035, + "FlipAngle": 9, + "PartialFourier": 1, + "BaseResolution": 256, + "ShimSetting": [ + -5330, + -9235, + -4920, + -360, + -144, + 618, + 70, + 37 + ], + "TxRefAmp": 298.476, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC5,7;NC1,2", + "PulseSequenceDetails": "%SiemensSeq%_gre", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 255, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "ParallelReductionFactorInPlane": 2, + "PixelBandwidth": 260, + "DwellTime": 7.5e-06, + "ImageOrientationPatientDICOM": [ + 0.99982, + -0.00283894, + 0.0187681, + 1.44522e-08, + 0.988752, + 0.149562 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 GCC4.9.2", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-mpicbs07/anat/sub-mpicbs07_flip-2_mt-off_space-other_MTS.json b/derivatives/data_preprocessed/sub-mpicbs07/anat/sub-mpicbs07_flip-2_mt-off_space-other_MTS.json index cf7fc7d0bf..e6d49febd3 100644 --- a/derivatives/data_preprocessed/sub-mpicbs07/anat/sub-mpicbs07_flip-2_mt-off_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-mpicbs07/anat/sub-mpicbs07_flip-2_mt-off_space-other_MTS.json @@ -1,64 +1,75 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma_fit", - "InstitutionName": "MPI_CBS", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "Stephanstrasse_1A_Leipzig_District_DE_04103", - "DeviceSerialNumber": "67037", - "StationName": "TRIOSYS", - "BodyPartExamined": "BRAIN", - "PatientPosition": "HFS", - "ProcedureStepDescription": "FE_Standard_Spinal", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-T1w", - "ProtocolName": "GRE-T1w", - "ScanningSequence": "GR", - "SequenceVariant": "SP", - "SequenceName": "_fl3d1", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS2D"], - "SeriesNumber": 7, - "AcquisitionTime": "12:29:7.950000", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SAR": 0.037534, - "EchoTime": 0.00313, - "RepetitionTime": 0.015, - "FlipAngle": 15, - "PartialFourier": 1, - "BaseResolution": 256, - "ShimSetting": [ - -5330, - -9235, - -4920, - -360, - -144, - 618, - 70, - 37 ], - "TxRefAmp": 298.476, - "PhaseResolution": 1, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC5,7;NC1,2", - "PulseSequenceDetails": "%SiemensSeq%_gre", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 100, - "PhaseEncodingSteps": 255, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 256, - "ParallelReductionFactorInPlane": 2, - "PixelBandwidth": 260, - "DwellTime": 7.5e-06, - "ImageOrientationPatientDICOM": [ - 0.99982, - -0.00283894, - 0.0187681, - 1.44522e-08, - 0.988752, - 0.149562 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 GCC4.9.2" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma_fit", + "InstitutionName": "MPI_CBS", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "Stephanstrasse_1A_Leipzig_District_DE_04103", + "DeviceSerialNumber": "67037", + "StationName": "TRIOSYS", + "BodyPartExamined": "BRAIN", + "PatientPosition": "HFS", + "ProcedureStepDescription": "FE_Standard_Spinal", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-T1w", + "ProtocolName": "GRE-T1w", + "ScanningSequence": "GR", + "SequenceVariant": "SP", + "SequenceName": "_fl3d1", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS2D" + ], + "SeriesNumber": 7, + "AcquisitionTime": "12:29:7.950000", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SAR": 0.037534, + "EchoTime": 0.00313, + "RepetitionTime": 0.015, + "FlipAngle": 15, + "PartialFourier": 1, + "BaseResolution": 256, + "ShimSetting": [ + -5330, + -9235, + -4920, + -360, + -144, + 618, + 70, + 37 + ], + "TxRefAmp": 298.476, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC5,7;NC1,2", + "PulseSequenceDetails": "%SiemensSeq%_gre", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 255, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "ParallelReductionFactorInPlane": 2, + "PixelBandwidth": 260, + "DwellTime": 7.5e-06, + "ImageOrientationPatientDICOM": [ + 0.99982, + -0.00283894, + 0.0187681, + 1.44522e-08, + 0.988752, + 0.149562 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 GCC4.9.2", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-mpicbs07/anat/sub-mpicbs07_space-other_T1w.json b/derivatives/data_preprocessed/sub-mpicbs07/anat/sub-mpicbs07_space-other_T1w.json index 6d64a73385..630bfe6968 100644 --- a/derivatives/data_preprocessed/sub-mpicbs07/anat/sub-mpicbs07_space-other_T1w.json +++ b/derivatives/data_preprocessed/sub-mpicbs07/anat/sub-mpicbs07_space-other_T1w.json @@ -1,66 +1,79 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma_fit", - "InstitutionName": "MPI_CBS", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "Stephanstrasse_1A_Leipzig_District_DE_04103", - "DeviceSerialNumber": "67037", - "StationName": "TRIOSYS", - "BodyPartExamined": "BRAIN", - "PatientPosition": "HFS", - "ProcedureStepDescription": "FE_Standard_Spinal", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "T1w", - "ProtocolName": "T1w", - "ScanningSequence": "GR_IR", - "SequenceVariant": "SK_SP_MP", - "ScanOptions": "IR", - "SequenceName": "_tfl3d1_16", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS3D", "DIS2D"], - "SeriesNumber": 2, - "AcquisitionTime": "12:10:1.047500", - "AcquisitionNumber": 1, - "SliceThickness": 1, - "SAR": 0.0675158, - "EchoTime": 0.00372, - "RepetitionTime": 2, - "InversionTime": 1, - "FlipAngle": 9, - "PartialFourier": 1, - "BaseResolution": 320, - "ShimSetting": [ - -5299, - -9160, - -4698, - 28, - -17, - -67, - 41, - -13 ], - "TxRefAmp": 281.903, - "PhaseResolution": 1, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC1-7;NC1,2", - "PulseSequenceDetails": "%SiemensSeq%_tfl", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 81.25, - "PhaseEncodingSteps": 259, - "AcquisitionMatrixPE": 260, - "ReconMatrixPE": 320, - "ParallelReductionFactorInPlane": 2, - "PixelBandwidth": 150, - "DwellTime": 1.04e-05, - "ImageOrientationPatientDICOM": [ - 0, - 1, - 0, - 0, - 0, - -1 ], - "InPlanePhaseEncodingDirectionDICOM": "ROW", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 GCC4.9.2" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma_fit", + "InstitutionName": "MPI_CBS", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "Stephanstrasse_1A_Leipzig_District_DE_04103", + "DeviceSerialNumber": "67037", + "StationName": "TRIOSYS", + "BodyPartExamined": "BRAIN", + "PatientPosition": "HFS", + "ProcedureStepDescription": "FE_Standard_Spinal", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "T1w", + "ProtocolName": "T1w", + "ScanningSequence": "GR_IR", + "SequenceVariant": "SK_SP_MP", + "ScanOptions": "IR", + "SequenceName": "_tfl3d1_16", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS3D", + "DIS2D" + ], + "SeriesNumber": 2, + "AcquisitionTime": "12:10:1.047500", + "AcquisitionNumber": 1, + "SliceThickness": 1, + "SAR": 0.0675158, + "EchoTime": 0.00372, + "RepetitionTime": 2, + "InversionTime": 1, + "FlipAngle": 9, + "PartialFourier": 1, + "BaseResolution": 320, + "ShimSetting": [ + -5299, + -9160, + -4698, + 28, + -17, + -67, + 41, + -13 + ], + "TxRefAmp": 281.903, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC1-7;NC1,2", + "PulseSequenceDetails": "%SiemensSeq%_tfl", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 81.25, + "PhaseEncodingSteps": 259, + "AcquisitionMatrixPE": 260, + "ReconMatrixPE": 320, + "ParallelReductionFactorInPlane": 2, + "PixelBandwidth": 150, + "DwellTime": 1.04e-05, + "ImageOrientationPatientDICOM": [ + 0, + 1, + 0, + 0, + 0, + -1 + ], + "InPlanePhaseEncodingDirectionDICOM": "ROW", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 GCC4.9.2", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-mpicbs07/anat/sub-mpicbs07_space-other_T2star.json b/derivatives/data_preprocessed/sub-mpicbs07/anat/sub-mpicbs07_space-other_T2star.json index b808c2afd0..d0c694ccb6 100644 --- a/derivatives/data_preprocessed/sub-mpicbs07/anat/sub-mpicbs07_space-other_T2star.json +++ b/derivatives/data_preprocessed/sub-mpicbs07/anat/sub-mpicbs07_space-other_T2star.json @@ -73,5 +73,9 @@ "InPlanePhaseEncodingDirectionDICOM": "COL", "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20180622 GCC4.9.2", - "AcquisitionDuration": 285.0 + "AcquisitionDuration": 285.0, + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-mpicbs07/anat/sub-mpicbs07_space-other_T2w.json b/derivatives/data_preprocessed/sub-mpicbs07/anat/sub-mpicbs07_space-other_T2w.json index 0cee81171b..7b12ded2d3 100644 --- a/derivatives/data_preprocessed/sub-mpicbs07/anat/sub-mpicbs07_space-other_T2w.json +++ b/derivatives/data_preprocessed/sub-mpicbs07/anat/sub-mpicbs07_space-other_T2w.json @@ -1,67 +1,80 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma_fit", - "InstitutionName": "MPI_CBS", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "Stephanstrasse_1A_Leipzig_District_DE_04103", - "DeviceSerialNumber": "67037", - "StationName": "TRIOSYS", - "BodyPartExamined": "BRAIN", - "PatientPosition": "HFS", - "ProcedureStepDescription": "FE_Standard_Spinal", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "T2w", - "ProtocolName": "T2w", - "ScanningSequence": "SE", - "SequenceVariant": "SK_SP_OSP", - "ScanOptions": "PFP", - "SequenceName": "_spcR_100", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS3D", "DIS2D"], - "SeriesNumber": 3, - "AcquisitionTime": "12:15:36.997500", - "AcquisitionNumber": 1, - "SliceThickness": 0.8, - "SAR": 0.664232, - "EchoTime": 0.12, - "RepetitionTime": 1.5, - "FlipAngle": 120, - "PartialFourier": 1, - "BaseResolution": 320, - "ShimSetting": [ - -5287, - -9157, - -4827, - -332, - 49, - -94, - 789, - 30 ], - "TxRefAmp": 318.008, - "PhaseResolution": 1, - "PhaseOversampling": 0.8, - "ReceiveCoilName": "Spine_32", - "ReceiveCoilActiveElements": "HC5-7;NC1,2;SP1", - "PulseSequenceDetails": "%SiemensSeq%_tse_vfl", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 100, - "EchoTrainLength": 76, - "PhaseEncodingSteps": 422, - "AcquisitionMatrixPE": 320, - "ReconMatrixPE": 320, - "ParallelReductionFactorInPlane": 3, - "PixelBandwidth": 625, - "DwellTime": 2.5e-06, - "ImageOrientationPatientDICOM": [ - 0, - 1, - 4.897e-12, - 0, - 4.897e-12, - -1 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 GCC4.9.2" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma_fit", + "InstitutionName": "MPI_CBS", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "Stephanstrasse_1A_Leipzig_District_DE_04103", + "DeviceSerialNumber": "67037", + "StationName": "TRIOSYS", + "BodyPartExamined": "BRAIN", + "PatientPosition": "HFS", + "ProcedureStepDescription": "FE_Standard_Spinal", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "T2w", + "ProtocolName": "T2w", + "ScanningSequence": "SE", + "SequenceVariant": "SK_SP_OSP", + "ScanOptions": "PFP", + "SequenceName": "_spcR_100", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS3D", + "DIS2D" + ], + "SeriesNumber": 3, + "AcquisitionTime": "12:15:36.997500", + "AcquisitionNumber": 1, + "SliceThickness": 0.8, + "SAR": 0.664232, + "EchoTime": 0.12, + "RepetitionTime": 1.5, + "FlipAngle": 120, + "PartialFourier": 1, + "BaseResolution": 320, + "ShimSetting": [ + -5287, + -9157, + -4827, + -332, + 49, + -94, + 789, + 30 + ], + "TxRefAmp": 318.008, + "PhaseResolution": 1, + "PhaseOversampling": 0.8, + "ReceiveCoilName": "Spine_32", + "ReceiveCoilActiveElements": "HC5-7;NC1,2;SP1", + "PulseSequenceDetails": "%SiemensSeq%_tse_vfl", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "EchoTrainLength": 76, + "PhaseEncodingSteps": 422, + "AcquisitionMatrixPE": 320, + "ReconMatrixPE": 320, + "ParallelReductionFactorInPlane": 3, + "PixelBandwidth": 625, + "DwellTime": 2.5e-06, + "ImageOrientationPatientDICOM": [ + 0, + 1, + 4.897e-12, + 0, + 4.897e-12, + -1 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 GCC4.9.2", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-nottwil01/anat/sub-nottwil01_flip-1_mt-on_space-other_MTS.json b/derivatives/data_preprocessed/sub-nottwil01/anat/sub-nottwil01_flip-1_mt-on_space-other_MTS.json index 80897ee9ea..b7a358f12a 100644 --- a/derivatives/data_preprocessed/sub-nottwil01/anat/sub-nottwil01_flip-1_mt-on_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-nottwil01/anat/sub-nottwil01_flip-1_mt-on_space-other_MTS.json @@ -1,7 +1,10 @@ { - "FlipAngle": 9, - "EchoTime": 0.002001, - "RepetitionTime": 0.057, - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181125 GCC4.9.2" -} + "FlipAngle": 9, + "EchoTime": 0.002001, + "RepetitionTime": 0.057, + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181125 GCC4.9.2", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-nottwil01/anat/sub-nottwil01_flip-2_mt-off_space-other_MTS.json b/derivatives/data_preprocessed/sub-nottwil01/anat/sub-nottwil01_flip-2_mt-off_space-other_MTS.json index 5a5cfee8be..e710b11117 100644 --- a/derivatives/data_preprocessed/sub-nottwil01/anat/sub-nottwil01_flip-2_mt-off_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-nottwil01/anat/sub-nottwil01_flip-2_mt-off_space-other_MTS.json @@ -1,7 +1,10 @@ { - "FlipAngle": 15, - "EchoTime": 0.002001, - "RepetitionTime": 0.015, - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181125 GCC4.9.2" -} + "FlipAngle": 15, + "EchoTime": 0.002001, + "RepetitionTime": 0.015, + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181125 GCC4.9.2", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-nottwil01/anat/sub-nottwil01_space-other_T1w.json b/derivatives/data_preprocessed/sub-nottwil01/anat/sub-nottwil01_space-other_T1w.json index cf39ea74b9..a90555771b 100644 --- a/derivatives/data_preprocessed/sub-nottwil01/anat/sub-nottwil01_space-other_T1w.json +++ b/derivatives/data_preprocessed/sub-nottwil01/anat/sub-nottwil01_space-other_T1w.json @@ -1,7 +1,11 @@ { - "EchoTime": 0.003552, - "RepetitionTime": 0.0076482, - "FlipAngle": 9, - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181125 GCC4.9.2" -} + "EchoTime": 0.003552, + "RepetitionTime": 0.0076482, + "FlipAngle": 9, + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181125 GCC4.9.2", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-nottwil01/anat/sub-nottwil01_space-other_T2star.json b/derivatives/data_preprocessed/sub-nottwil01/anat/sub-nottwil01_space-other_T2star.json index fd1e29ede9..1c8f527e63 100644 --- a/derivatives/data_preprocessed/sub-nottwil01/anat/sub-nottwil01_space-other_T2star.json +++ b/derivatives/data_preprocessed/sub-nottwil01/anat/sub-nottwil01_space-other_T2star.json @@ -4,5 +4,9 @@ "FlipAngle": 30, "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20181125 GCC4.9.2", - "AcquisitionDuration": 242.5 + "AcquisitionDuration": 242.5, + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-nottwil01/anat/sub-nottwil01_space-other_T2w.json b/derivatives/data_preprocessed/sub-nottwil01/anat/sub-nottwil01_space-other_T2w.json index ae5a75c646..dafd7a3691 100644 --- a/derivatives/data_preprocessed/sub-nottwil01/anat/sub-nottwil01_space-other_T2w.json +++ b/derivatives/data_preprocessed/sub-nottwil01/anat/sub-nottwil01_space-other_T2w.json @@ -1,7 +1,11 @@ { - "EchoTime": 0.12, - "RepetitionTime": 3.5, - "FlipAngle": 90, - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181125 GCC4.9.2" -} + "EchoTime": 0.12, + "RepetitionTime": 3.5, + "FlipAngle": 90, + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181125 GCC4.9.2", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-nottwil02/anat/sub-nottwil02_flip-1_mt-on_space-other_MTS.json b/derivatives/data_preprocessed/sub-nottwil02/anat/sub-nottwil02_flip-1_mt-on_space-other_MTS.json index 3a2ed59317..80f0f70fa4 100644 --- a/derivatives/data_preprocessed/sub-nottwil02/anat/sub-nottwil02_flip-1_mt-on_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-nottwil02/anat/sub-nottwil02_flip-1_mt-on_space-other_MTS.json @@ -1,8 +1,10 @@ { - - "EchoTime": 0.002001, - "RepetitionTime": 0.057, - "FlipAngle": 9, - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181125 GCC4.9.2" -} + "EchoTime": 0.002001, + "RepetitionTime": 0.057, + "FlipAngle": 9, + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181125 GCC4.9.2", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-nottwil02/anat/sub-nottwil02_flip-2_mt-off_space-other_MTS.json b/derivatives/data_preprocessed/sub-nottwil02/anat/sub-nottwil02_flip-2_mt-off_space-other_MTS.json index e1b0faf32d..82548ddfd6 100644 --- a/derivatives/data_preprocessed/sub-nottwil02/anat/sub-nottwil02_flip-2_mt-off_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-nottwil02/anat/sub-nottwil02_flip-2_mt-off_space-other_MTS.json @@ -1,8 +1,10 @@ { - - "EchoTime": 0.002001, - "RepetitionTime": 0.015, - "FlipAngle": 15, - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181125 GCC4.9.2" -} + "EchoTime": 0.002001, + "RepetitionTime": 0.015, + "FlipAngle": 15, + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181125 GCC4.9.2", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-nottwil02/anat/sub-nottwil02_space-other_T1w.json b/derivatives/data_preprocessed/sub-nottwil02/anat/sub-nottwil02_space-other_T1w.json index fab66e1997..46049f3e49 100644 --- a/derivatives/data_preprocessed/sub-nottwil02/anat/sub-nottwil02_space-other_T1w.json +++ b/derivatives/data_preprocessed/sub-nottwil02/anat/sub-nottwil02_space-other_T1w.json @@ -1,8 +1,11 @@ { - - "EchoTime": 0.003551, - "RepetitionTime": 0.0076276, - "FlipAngle": 9, - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181125 GCC4.9.2" -} + "EchoTime": 0.003551, + "RepetitionTime": 0.0076276, + "FlipAngle": 9, + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181125 GCC4.9.2", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-nottwil02/anat/sub-nottwil02_space-other_T2star.json b/derivatives/data_preprocessed/sub-nottwil02/anat/sub-nottwil02_space-other_T2star.json index 2a93294122..67c91f9d09 100644 --- a/derivatives/data_preprocessed/sub-nottwil02/anat/sub-nottwil02_space-other_T2star.json +++ b/derivatives/data_preprocessed/sub-nottwil02/anat/sub-nottwil02_space-other_T2star.json @@ -4,5 +4,9 @@ "FlipAngle": 30, "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20181125 GCC4.9.2", - "AcquisitionDuration": 242.5 + "AcquisitionDuration": 242.5, + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-nottwil02/anat/sub-nottwil02_space-other_T2w.json b/derivatives/data_preprocessed/sub-nottwil02/anat/sub-nottwil02_space-other_T2w.json index ae5a75c646..dafd7a3691 100644 --- a/derivatives/data_preprocessed/sub-nottwil02/anat/sub-nottwil02_space-other_T2w.json +++ b/derivatives/data_preprocessed/sub-nottwil02/anat/sub-nottwil02_space-other_T2w.json @@ -1,7 +1,11 @@ { - "EchoTime": 0.12, - "RepetitionTime": 3.5, - "FlipAngle": 90, - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181125 GCC4.9.2" -} + "EchoTime": 0.12, + "RepetitionTime": 3.5, + "FlipAngle": 90, + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181125 GCC4.9.2", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-nottwil03/anat/sub-nottwil03_flip-1_mt-on_space-other_MTS.json b/derivatives/data_preprocessed/sub-nottwil03/anat/sub-nottwil03_flip-1_mt-on_space-other_MTS.json index 765ceb2597..80f0f70fa4 100644 --- a/derivatives/data_preprocessed/sub-nottwil03/anat/sub-nottwil03_flip-1_mt-on_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-nottwil03/anat/sub-nottwil03_flip-1_mt-on_space-other_MTS.json @@ -1,7 +1,10 @@ { - "EchoTime": 0.002001, - "RepetitionTime": 0.057, - "FlipAngle": 9, - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181125 GCC4.9.2" -} + "EchoTime": 0.002001, + "RepetitionTime": 0.057, + "FlipAngle": 9, + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181125 GCC4.9.2", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-nottwil03/anat/sub-nottwil03_flip-2_mt-off_space-other_MTS.json b/derivatives/data_preprocessed/sub-nottwil03/anat/sub-nottwil03_flip-2_mt-off_space-other_MTS.json index fea9190ed7..82548ddfd6 100644 --- a/derivatives/data_preprocessed/sub-nottwil03/anat/sub-nottwil03_flip-2_mt-off_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-nottwil03/anat/sub-nottwil03_flip-2_mt-off_space-other_MTS.json @@ -1,7 +1,10 @@ { - "EchoTime": 0.002001, - "RepetitionTime": 0.015, - "FlipAngle": 15, - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181125 GCC4.9.2" -} + "EchoTime": 0.002001, + "RepetitionTime": 0.015, + "FlipAngle": 15, + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181125 GCC4.9.2", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-nottwil03/anat/sub-nottwil03_space-other_T1w.json b/derivatives/data_preprocessed/sub-nottwil03/anat/sub-nottwil03_space-other_T1w.json index da28d8e52c..c344f7d299 100644 --- a/derivatives/data_preprocessed/sub-nottwil03/anat/sub-nottwil03_space-other_T1w.json +++ b/derivatives/data_preprocessed/sub-nottwil03/anat/sub-nottwil03_space-other_T1w.json @@ -1,7 +1,11 @@ { - "EchoTime": 0.00355, - "RepetitionTime": 0.0076425, - "FlipAngle": 9, - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181125 GCC4.9.2" -} + "EchoTime": 0.00355, + "RepetitionTime": 0.0076425, + "FlipAngle": 9, + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181125 GCC4.9.2", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-nottwil03/anat/sub-nottwil03_space-other_T2star.json b/derivatives/data_preprocessed/sub-nottwil03/anat/sub-nottwil03_space-other_T2star.json index 86862baba3..38cb06a00c 100644 --- a/derivatives/data_preprocessed/sub-nottwil03/anat/sub-nottwil03_space-other_T2star.json +++ b/derivatives/data_preprocessed/sub-nottwil03/anat/sub-nottwil03_space-other_T2star.json @@ -4,5 +4,9 @@ "FlipAngle": 30, "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20181125 GCC4.9.2", - "AcquisitionDuration": 242.5 + "AcquisitionDuration": 242.5, + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-nottwil03/anat/sub-nottwil03_space-other_T2w.json b/derivatives/data_preprocessed/sub-nottwil03/anat/sub-nottwil03_space-other_T2w.json index ae5a75c646..dafd7a3691 100644 --- a/derivatives/data_preprocessed/sub-nottwil03/anat/sub-nottwil03_space-other_T2w.json +++ b/derivatives/data_preprocessed/sub-nottwil03/anat/sub-nottwil03_space-other_T2w.json @@ -1,7 +1,11 @@ { - "EchoTime": 0.12, - "RepetitionTime": 3.5, - "FlipAngle": 90, - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181125 GCC4.9.2" -} + "EchoTime": 0.12, + "RepetitionTime": 3.5, + "FlipAngle": 90, + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181125 GCC4.9.2", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-nottwil04/anat/sub-nottwil04_flip-1_mt-on_space-other_MTS.json b/derivatives/data_preprocessed/sub-nottwil04/anat/sub-nottwil04_flip-1_mt-on_space-other_MTS.json index 765ceb2597..80f0f70fa4 100644 --- a/derivatives/data_preprocessed/sub-nottwil04/anat/sub-nottwil04_flip-1_mt-on_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-nottwil04/anat/sub-nottwil04_flip-1_mt-on_space-other_MTS.json @@ -1,7 +1,10 @@ { - "EchoTime": 0.002001, - "RepetitionTime": 0.057, - "FlipAngle": 9, - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181125 GCC4.9.2" -} + "EchoTime": 0.002001, + "RepetitionTime": 0.057, + "FlipAngle": 9, + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181125 GCC4.9.2", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-nottwil04/anat/sub-nottwil04_flip-2_mt-off_space-other_MTS.json b/derivatives/data_preprocessed/sub-nottwil04/anat/sub-nottwil04_flip-2_mt-off_space-other_MTS.json index fea9190ed7..82548ddfd6 100644 --- a/derivatives/data_preprocessed/sub-nottwil04/anat/sub-nottwil04_flip-2_mt-off_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-nottwil04/anat/sub-nottwil04_flip-2_mt-off_space-other_MTS.json @@ -1,7 +1,10 @@ { - "EchoTime": 0.002001, - "RepetitionTime": 0.015, - "FlipAngle": 15, - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181125 GCC4.9.2" -} + "EchoTime": 0.002001, + "RepetitionTime": 0.015, + "FlipAngle": 15, + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181125 GCC4.9.2", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-nottwil04/anat/sub-nottwil04_space-other_T1w.json b/derivatives/data_preprocessed/sub-nottwil04/anat/sub-nottwil04_space-other_T1w.json index 678a2482e8..2d0745c733 100644 --- a/derivatives/data_preprocessed/sub-nottwil04/anat/sub-nottwil04_space-other_T1w.json +++ b/derivatives/data_preprocessed/sub-nottwil04/anat/sub-nottwil04_space-other_T1w.json @@ -1,7 +1,11 @@ { - "EchoTime": 0.003552, - "RepetitionTime": 0.0076545, - "FlipAngle": 9, - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181125 GCC4.9.2" -} + "EchoTime": 0.003552, + "RepetitionTime": 0.0076545, + "FlipAngle": 9, + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181125 GCC4.9.2", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-nottwil04/anat/sub-nottwil04_space-other_T2star.json b/derivatives/data_preprocessed/sub-nottwil04/anat/sub-nottwil04_space-other_T2star.json index d5608c1cc8..e667831e21 100644 --- a/derivatives/data_preprocessed/sub-nottwil04/anat/sub-nottwil04_space-other_T2star.json +++ b/derivatives/data_preprocessed/sub-nottwil04/anat/sub-nottwil04_space-other_T2star.json @@ -4,5 +4,9 @@ "FlipAngle": 30, "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20181125 GCC4.9.2", - "AcquisitionDuration": 242.5 + "AcquisitionDuration": 242.5, + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-nottwil04/anat/sub-nottwil04_space-other_T2w.json b/derivatives/data_preprocessed/sub-nottwil04/anat/sub-nottwil04_space-other_T2w.json index ae5a75c646..dafd7a3691 100644 --- a/derivatives/data_preprocessed/sub-nottwil04/anat/sub-nottwil04_space-other_T2w.json +++ b/derivatives/data_preprocessed/sub-nottwil04/anat/sub-nottwil04_space-other_T2w.json @@ -1,7 +1,11 @@ { - "EchoTime": 0.12, - "RepetitionTime": 3.5, - "FlipAngle": 90, - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181125 GCC4.9.2" -} + "EchoTime": 0.12, + "RepetitionTime": 3.5, + "FlipAngle": 90, + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181125 GCC4.9.2", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-nottwil05/anat/sub-nottwil05_flip-1_mt-on_space-other_MTS.json b/derivatives/data_preprocessed/sub-nottwil05/anat/sub-nottwil05_flip-1_mt-on_space-other_MTS.json index 765ceb2597..80f0f70fa4 100644 --- a/derivatives/data_preprocessed/sub-nottwil05/anat/sub-nottwil05_flip-1_mt-on_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-nottwil05/anat/sub-nottwil05_flip-1_mt-on_space-other_MTS.json @@ -1,7 +1,10 @@ { - "EchoTime": 0.002001, - "RepetitionTime": 0.057, - "FlipAngle": 9, - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181125 GCC4.9.2" -} + "EchoTime": 0.002001, + "RepetitionTime": 0.057, + "FlipAngle": 9, + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181125 GCC4.9.2", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-nottwil05/anat/sub-nottwil05_flip-2_mt-off_space-other_MTS.json b/derivatives/data_preprocessed/sub-nottwil05/anat/sub-nottwil05_flip-2_mt-off_space-other_MTS.json index fea9190ed7..82548ddfd6 100644 --- a/derivatives/data_preprocessed/sub-nottwil05/anat/sub-nottwil05_flip-2_mt-off_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-nottwil05/anat/sub-nottwil05_flip-2_mt-off_space-other_MTS.json @@ -1,7 +1,10 @@ { - "EchoTime": 0.002001, - "RepetitionTime": 0.015, - "FlipAngle": 15, - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181125 GCC4.9.2" -} + "EchoTime": 0.002001, + "RepetitionTime": 0.015, + "FlipAngle": 15, + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181125 GCC4.9.2", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-nottwil05/anat/sub-nottwil05_space-other_T1w.json b/derivatives/data_preprocessed/sub-nottwil05/anat/sub-nottwil05_space-other_T1w.json index ddd7e5f125..cf313f5b5d 100644 --- a/derivatives/data_preprocessed/sub-nottwil05/anat/sub-nottwil05_space-other_T1w.json +++ b/derivatives/data_preprocessed/sub-nottwil05/anat/sub-nottwil05_space-other_T1w.json @@ -1,7 +1,11 @@ { - "EchoTime": 0.003556, - "RepetitionTime": 0.0076473, - "FlipAngle": 9, - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181125 GCC4.9.2" -} + "EchoTime": 0.003556, + "RepetitionTime": 0.0076473, + "FlipAngle": 9, + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181125 GCC4.9.2", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-nottwil05/anat/sub-nottwil05_space-other_T2star.json b/derivatives/data_preprocessed/sub-nottwil05/anat/sub-nottwil05_space-other_T2star.json index 6376231613..68f81e9c54 100644 --- a/derivatives/data_preprocessed/sub-nottwil05/anat/sub-nottwil05_space-other_T2star.json +++ b/derivatives/data_preprocessed/sub-nottwil05/anat/sub-nottwil05_space-other_T2star.json @@ -4,5 +4,9 @@ "FlipAngle": 30, "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20181125 GCC4.9.2", - "AcquisitionDuration": 242.5 + "AcquisitionDuration": 242.5, + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-nottwil05/anat/sub-nottwil05_space-other_T2w.json b/derivatives/data_preprocessed/sub-nottwil05/anat/sub-nottwil05_space-other_T2w.json index ae5a75c646..dafd7a3691 100644 --- a/derivatives/data_preprocessed/sub-nottwil05/anat/sub-nottwil05_space-other_T2w.json +++ b/derivatives/data_preprocessed/sub-nottwil05/anat/sub-nottwil05_space-other_T2w.json @@ -1,7 +1,11 @@ { - "EchoTime": 0.12, - "RepetitionTime": 3.5, - "FlipAngle": 90, - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181125 GCC4.9.2" -} + "EchoTime": 0.12, + "RepetitionTime": 3.5, + "FlipAngle": 90, + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181125 GCC4.9.2", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-nottwil06/anat/sub-nottwil06_flip-1_mt-on_space-other_MTS.json b/derivatives/data_preprocessed/sub-nottwil06/anat/sub-nottwil06_flip-1_mt-on_space-other_MTS.json index 765ceb2597..80f0f70fa4 100644 --- a/derivatives/data_preprocessed/sub-nottwil06/anat/sub-nottwil06_flip-1_mt-on_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-nottwil06/anat/sub-nottwil06_flip-1_mt-on_space-other_MTS.json @@ -1,7 +1,10 @@ { - "EchoTime": 0.002001, - "RepetitionTime": 0.057, - "FlipAngle": 9, - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181125 GCC4.9.2" -} + "EchoTime": 0.002001, + "RepetitionTime": 0.057, + "FlipAngle": 9, + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181125 GCC4.9.2", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-nottwil06/anat/sub-nottwil06_flip-2_mt-off_space-other_MTS.json b/derivatives/data_preprocessed/sub-nottwil06/anat/sub-nottwil06_flip-2_mt-off_space-other_MTS.json index fea9190ed7..82548ddfd6 100644 --- a/derivatives/data_preprocessed/sub-nottwil06/anat/sub-nottwil06_flip-2_mt-off_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-nottwil06/anat/sub-nottwil06_flip-2_mt-off_space-other_MTS.json @@ -1,7 +1,10 @@ { - "EchoTime": 0.002001, - "RepetitionTime": 0.015, - "FlipAngle": 15, - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181125 GCC4.9.2" -} + "EchoTime": 0.002001, + "RepetitionTime": 0.015, + "FlipAngle": 15, + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181125 GCC4.9.2", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-nottwil06/anat/sub-nottwil06_space-other_T1w.json b/derivatives/data_preprocessed/sub-nottwil06/anat/sub-nottwil06_space-other_T1w.json index 7cb353e425..fb8e29d123 100644 --- a/derivatives/data_preprocessed/sub-nottwil06/anat/sub-nottwil06_space-other_T1w.json +++ b/derivatives/data_preprocessed/sub-nottwil06/anat/sub-nottwil06_space-other_T1w.json @@ -1,7 +1,11 @@ { - "EchoTime": 0.003548, - "RepetitionTime": 0.0076441, - "FlipAngle": 9, - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181125 GCC4.9.2" -} + "EchoTime": 0.003548, + "RepetitionTime": 0.0076441, + "FlipAngle": 9, + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181125 GCC4.9.2", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-nottwil06/anat/sub-nottwil06_space-other_T2star.json b/derivatives/data_preprocessed/sub-nottwil06/anat/sub-nottwil06_space-other_T2star.json index 2906d75c79..82563b0560 100644 --- a/derivatives/data_preprocessed/sub-nottwil06/anat/sub-nottwil06_space-other_T2star.json +++ b/derivatives/data_preprocessed/sub-nottwil06/anat/sub-nottwil06_space-other_T2star.json @@ -4,5 +4,9 @@ "FlipAngle": 30, "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20181125 GCC4.9.2", - "AcquisitionDuration": 242.5 + "AcquisitionDuration": 242.5, + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-nottwil06/anat/sub-nottwil06_space-other_T2w.json b/derivatives/data_preprocessed/sub-nottwil06/anat/sub-nottwil06_space-other_T2w.json index ae5a75c646..dafd7a3691 100644 --- a/derivatives/data_preprocessed/sub-nottwil06/anat/sub-nottwil06_space-other_T2w.json +++ b/derivatives/data_preprocessed/sub-nottwil06/anat/sub-nottwil06_space-other_T2w.json @@ -1,7 +1,11 @@ { - "EchoTime": 0.12, - "RepetitionTime": 3.5, - "FlipAngle": 90, - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181125 GCC4.9.2" -} + "EchoTime": 0.12, + "RepetitionTime": 3.5, + "FlipAngle": 90, + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181125 GCC4.9.2", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-nwu01/anat/sub-nwu01_flip-1_mt-on_space-other_MTS.json b/derivatives/data_preprocessed/sub-nwu01/anat/sub-nwu01_flip-1_mt-on_space-other_MTS.json index 1181dd1193..8d3710f9bd 100644 --- a/derivatives/data_preprocessed/sub-nwu01/anat/sub-nwu01_flip-1_mt-on_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-nwu01/anat/sub-nwu01_flip-1_mt-on_space-other_MTS.json @@ -1,65 +1,75 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma_fit", - "InstitutionName": "NU_Tuna", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "Fairbanks_710_Chicago_Chicago_US_60611", - "DeviceSerialNumber": "67034", - "StationName": "MRC35427", - "BodyPartExamined": "CSPINE", - "PatientPosition": "HFS", - "ProcedureStepDescription": "fMRI_STUDIES_DEWALD", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-MT1", - "ProtocolName": "GRE-MT1", - "ScanningSequence": "GR", - "SequenceVariant": "MTC_SP", - "ScanOptions": "MT", - "SequenceName": "_fl3d1", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "DIS2D"], - "SeriesNumber": 5, - "AcquisitionTime": "10:48:46.690000", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SAR": 0.609607, - "EchoTime": 0.00313, - "RepetitionTime": 0.035, - "FlipAngle": 9, - "PartialFourier": 1, - "BaseResolution": 256, - "ShimSetting": [ - 2632, - 5501, - -7855, - -113, - 126, - 1835, - 535, - -89 ], - "TxRefAmp": 295.154, - "PhaseResolution": 1, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC5-7;NC1,2", - "PulseSequenceDetails": "%SiemensSeq%_gre", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 100, - "PhaseEncodingSteps": 255, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 256, - "ParallelReductionFactorInPlane": 2, - "PixelBandwidth": 260, - "DwellTime": 7.5e-06, - "ImageOrientationPatientDICOM": [ - 1, - 0, - 0, - 0, - 0.946085, - 0.323917 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma_fit", + "InstitutionName": "NU_Tuna", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "Fairbanks_710_Chicago_Chicago_US_60611", + "DeviceSerialNumber": "67034", + "StationName": "MRC35427", + "BodyPartExamined": "CSPINE", + "PatientPosition": "HFS", + "ProcedureStepDescription": "fMRI_STUDIES_DEWALD", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-MT1", + "ProtocolName": "GRE-MT1", + "ScanningSequence": "GR", + "SequenceVariant": "MTC_SP", + "ScanOptions": "MT", + "SequenceName": "_fl3d1", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "DIS2D" + ], + "SeriesNumber": 5, + "AcquisitionTime": "10:48:46.690000", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SAR": 0.609607, + "EchoTime": 0.00313, + "RepetitionTime": 0.035, + "FlipAngle": 9, + "PartialFourier": 1, + "BaseResolution": 256, + "ShimSetting": [ + 2632, + 5501, + -7855, + -113, + 126, + 1835, + 535, + -89 + ], + "TxRefAmp": 295.154, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC5-7;NC1,2", + "PulseSequenceDetails": "%SiemensSeq%_gre", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 255, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "ParallelReductionFactorInPlane": 2, + "PixelBandwidth": 260, + "DwellTime": 7.5e-06, + "ImageOrientationPatientDICOM": [ + 1, + 0, + 0, + 0, + 0.946085, + 0.323917 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-nwu01/anat/sub-nwu01_flip-2_mt-off_space-other_MTS.json b/derivatives/data_preprocessed/sub-nwu01/anat/sub-nwu01_flip-2_mt-off_space-other_MTS.json index b62dccd31d..f6a12cadca 100644 --- a/derivatives/data_preprocessed/sub-nwu01/anat/sub-nwu01_flip-2_mt-off_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-nwu01/anat/sub-nwu01_flip-2_mt-off_space-other_MTS.json @@ -1,64 +1,74 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma_fit", - "InstitutionName": "NU_Tuna", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "Fairbanks_710_Chicago_Chicago_US_60611", - "DeviceSerialNumber": "67034", - "StationName": "MRC35427", - "BodyPartExamined": "CSPINE", - "PatientPosition": "HFS", - "ProcedureStepDescription": "fMRI_STUDIES_DEWALD", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-T1w", - "ProtocolName": "GRE-T1w", - "ScanningSequence": "GR", - "SequenceVariant": "SP", - "SequenceName": "_fl3d1", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "DIS2D"], - "SeriesNumber": 7, - "AcquisitionTime": "10:53:12.907500", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SAR": 0.039525, - "EchoTime": 0.00313, - "RepetitionTime": 0.015, - "FlipAngle": 15, - "PartialFourier": 1, - "BaseResolution": 256, - "ShimSetting": [ - 2632, - 5501, - -7855, - -113, - 126, - 1835, - 535, - -89 ], - "TxRefAmp": 295.154, - "PhaseResolution": 1, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC5-7;NC1,2", - "PulseSequenceDetails": "%SiemensSeq%_gre", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 100, - "PhaseEncodingSteps": 255, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 256, - "ParallelReductionFactorInPlane": 2, - "PixelBandwidth": 260, - "DwellTime": 7.5e-06, - "ImageOrientationPatientDICOM": [ - 1, - 0, - 0, - 0, - 0.946085, - 0.323917 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma_fit", + "InstitutionName": "NU_Tuna", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "Fairbanks_710_Chicago_Chicago_US_60611", + "DeviceSerialNumber": "67034", + "StationName": "MRC35427", + "BodyPartExamined": "CSPINE", + "PatientPosition": "HFS", + "ProcedureStepDescription": "fMRI_STUDIES_DEWALD", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-T1w", + "ProtocolName": "GRE-T1w", + "ScanningSequence": "GR", + "SequenceVariant": "SP", + "SequenceName": "_fl3d1", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "DIS2D" + ], + "SeriesNumber": 7, + "AcquisitionTime": "10:53:12.907500", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SAR": 0.039525, + "EchoTime": 0.00313, + "RepetitionTime": 0.015, + "FlipAngle": 15, + "PartialFourier": 1, + "BaseResolution": 256, + "ShimSetting": [ + 2632, + 5501, + -7855, + -113, + 126, + 1835, + 535, + -89 + ], + "TxRefAmp": 295.154, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC5-7;NC1,2", + "PulseSequenceDetails": "%SiemensSeq%_gre", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 255, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "ParallelReductionFactorInPlane": 2, + "PixelBandwidth": 260, + "DwellTime": 7.5e-06, + "ImageOrientationPatientDICOM": [ + 1, + 0, + 0, + 0, + 0.946085, + 0.323917 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-nwu01/anat/sub-nwu01_space-other_T1w.json b/derivatives/data_preprocessed/sub-nwu01/anat/sub-nwu01_space-other_T1w.json index de5b7d38f8..f3533cfe6a 100644 --- a/derivatives/data_preprocessed/sub-nwu01/anat/sub-nwu01_space-other_T1w.json +++ b/derivatives/data_preprocessed/sub-nwu01/anat/sub-nwu01_space-other_T1w.json @@ -1,66 +1,79 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma_fit", - "InstitutionName": "NU_Tuna", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "Fairbanks_710_Chicago_Chicago_US_60611", - "DeviceSerialNumber": "67034", - "StationName": "MRC35427", - "BodyPartExamined": "CSPINE", - "PatientPosition": "HFS", - "ProcedureStepDescription": "fMRI_STUDIES_DEWALD", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "T1w", - "ProtocolName": "T1w", - "ScanningSequence": "GR_IR", - "SequenceVariant": "SK_SP_MP", - "ScanOptions": "IR", - "SequenceName": "_tfl3d1_16", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS3D", "DIS2D"], - "SeriesNumber": 2, - "AcquisitionTime": "10:31:19.687500", - "AcquisitionNumber": 1, - "SliceThickness": 1, - "SAR": 0.0825928, - "EchoTime": 0.00372, - "RepetitionTime": 2, - "InversionTime": 1, - "FlipAngle": 9, - "PartialFourier": 1, - "BaseResolution": 320, - "ShimSetting": [ - 2639, - 5490, - -7665, - 208, - -44, - -590, - 119, - -158 ], - "TxRefAmp": 293.139, - "PhaseResolution": 1, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC5-7;NC1,2", - "PulseSequenceDetails": "%SiemensSeq%_tfl", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 81.25, - "PhaseEncodingSteps": 259, - "AcquisitionMatrixPE": 260, - "ReconMatrixPE": 320, - "ParallelReductionFactorInPlane": 2, - "PixelBandwidth": 150, - "DwellTime": 1.04e-05, - "ImageOrientationPatientDICOM": [ - 0, - 1, - 0, - 0, - 0, - -1 ], - "InPlanePhaseEncodingDirectionDICOM": "ROW", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma_fit", + "InstitutionName": "NU_Tuna", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "Fairbanks_710_Chicago_Chicago_US_60611", + "DeviceSerialNumber": "67034", + "StationName": "MRC35427", + "BodyPartExamined": "CSPINE", + "PatientPosition": "HFS", + "ProcedureStepDescription": "fMRI_STUDIES_DEWALD", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "T1w", + "ProtocolName": "T1w", + "ScanningSequence": "GR_IR", + "SequenceVariant": "SK_SP_MP", + "ScanOptions": "IR", + "SequenceName": "_tfl3d1_16", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS3D", + "DIS2D" + ], + "SeriesNumber": 2, + "AcquisitionTime": "10:31:19.687500", + "AcquisitionNumber": 1, + "SliceThickness": 1, + "SAR": 0.0825928, + "EchoTime": 0.00372, + "RepetitionTime": 2, + "InversionTime": 1, + "FlipAngle": 9, + "PartialFourier": 1, + "BaseResolution": 320, + "ShimSetting": [ + 2639, + 5490, + -7665, + 208, + -44, + -590, + 119, + -158 + ], + "TxRefAmp": 293.139, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC5-7;NC1,2", + "PulseSequenceDetails": "%SiemensSeq%_tfl", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 81.25, + "PhaseEncodingSteps": 259, + "AcquisitionMatrixPE": 260, + "ReconMatrixPE": 320, + "ParallelReductionFactorInPlane": 2, + "PixelBandwidth": 150, + "DwellTime": 1.04e-05, + "ImageOrientationPatientDICOM": [ + 0, + 1, + 0, + 0, + 0, + -1 + ], + "InPlanePhaseEncodingDirectionDICOM": "ROW", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-nwu01/anat/sub-nwu01_space-other_T2star.json b/derivatives/data_preprocessed/sub-nwu01/anat/sub-nwu01_space-other_T2star.json index b27e41d0ec..40d9c98040 100644 --- a/derivatives/data_preprocessed/sub-nwu01/anat/sub-nwu01_space-other_T2star.json +++ b/derivatives/data_preprocessed/sub-nwu01/anat/sub-nwu01_space-other_T2star.json @@ -73,5 +73,9 @@ "InPlanePhaseEncodingDirectionDICOM": "COL", "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0", - "AcquisitionDuration": 285.0 + "AcquisitionDuration": 285.0, + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-nwu01/anat/sub-nwu01_space-other_T2w.json b/derivatives/data_preprocessed/sub-nwu01/anat/sub-nwu01_space-other_T2w.json index 01cb69e13d..d6be60c192 100644 --- a/derivatives/data_preprocessed/sub-nwu01/anat/sub-nwu01_space-other_T2w.json +++ b/derivatives/data_preprocessed/sub-nwu01/anat/sub-nwu01_space-other_T2w.json @@ -1,67 +1,80 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma_fit", - "InstitutionName": "NU_Tuna", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "Fairbanks_710_Chicago_Chicago_US_60611", - "DeviceSerialNumber": "67034", - "StationName": "MRC35427", - "BodyPartExamined": "CSPINE", - "PatientPosition": "HFS", - "ProcedureStepDescription": "fMRI_STUDIES_DEWALD", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "T2w", - "ProtocolName": "T2w", - "ScanningSequence": "SE", - "SequenceVariant": "SK_SP_OSP", - "ScanOptions": "PFP", - "SequenceName": "_spcR_100", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS3D", "DIS2D"], - "SeriesNumber": 3, - "AcquisitionTime": "10:39:2.705000", - "AcquisitionNumber": 1, - "SliceThickness": 0.8, - "SAR": 0.61439, - "EchoTime": 0.12, - "RepetitionTime": 1.5, - "FlipAngle": 120, - "PartialFourier": 1, - "BaseResolution": 320, - "ShimSetting": [ - 2639, - 5490, - -7665, - 208, - -44, - -590, - 119, - -158 ], - "TxRefAmp": 293.139, - "PhaseResolution": 1, - "PhaseOversampling": 0.8, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC5-7;NC1,2", - "PulseSequenceDetails": "%SiemensSeq%_tse_vfl", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 100, - "EchoTrainLength": 76, - "PhaseEncodingSteps": 422, - "AcquisitionMatrixPE": 320, - "ReconMatrixPE": 320, - "ParallelReductionFactorInPlane": 3, - "PixelBandwidth": 625, - "DwellTime": 2.5e-06, - "ImageOrientationPatientDICOM": [ - 2.31e-13, - 1, - 4.891e-12, - -0.0471064, - 4.897e-12, - -0.99889 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma_fit", + "InstitutionName": "NU_Tuna", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "Fairbanks_710_Chicago_Chicago_US_60611", + "DeviceSerialNumber": "67034", + "StationName": "MRC35427", + "BodyPartExamined": "CSPINE", + "PatientPosition": "HFS", + "ProcedureStepDescription": "fMRI_STUDIES_DEWALD", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "T2w", + "ProtocolName": "T2w", + "ScanningSequence": "SE", + "SequenceVariant": "SK_SP_OSP", + "ScanOptions": "PFP", + "SequenceName": "_spcR_100", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS3D", + "DIS2D" + ], + "SeriesNumber": 3, + "AcquisitionTime": "10:39:2.705000", + "AcquisitionNumber": 1, + "SliceThickness": 0.8, + "SAR": 0.61439, + "EchoTime": 0.12, + "RepetitionTime": 1.5, + "FlipAngle": 120, + "PartialFourier": 1, + "BaseResolution": 320, + "ShimSetting": [ + 2639, + 5490, + -7665, + 208, + -44, + -590, + 119, + -158 + ], + "TxRefAmp": 293.139, + "PhaseResolution": 1, + "PhaseOversampling": 0.8, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC5-7;NC1,2", + "PulseSequenceDetails": "%SiemensSeq%_tse_vfl", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "EchoTrainLength": 76, + "PhaseEncodingSteps": 422, + "AcquisitionMatrixPE": 320, + "ReconMatrixPE": 320, + "ParallelReductionFactorInPlane": 3, + "PixelBandwidth": 625, + "DwellTime": 2.5e-06, + "ImageOrientationPatientDICOM": [ + 2.31e-13, + 1, + 4.891e-12, + -0.0471064, + 4.897e-12, + -0.99889 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-nwu02/anat/sub-nwu02_flip-1_mt-on_space-other_MTS.json b/derivatives/data_preprocessed/sub-nwu02/anat/sub-nwu02_flip-1_mt-on_space-other_MTS.json index e86b626c83..4beffc1968 100644 --- a/derivatives/data_preprocessed/sub-nwu02/anat/sub-nwu02_flip-1_mt-on_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-nwu02/anat/sub-nwu02_flip-1_mt-on_space-other_MTS.json @@ -1,65 +1,75 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma_fit", - "InstitutionName": "NU_Tuna", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "Fairbanks_710_Chicago_Chicago_US_60611", - "DeviceSerialNumber": "67034", - "StationName": "MRC35427", - "BodyPartExamined": "CSPINE", - "PatientPosition": "HFS", - "ProcedureStepDescription": "fMRI_STUDIES_DEWALD", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-MT1", - "ProtocolName": "GRE-MT1", - "ScanningSequence": "GR", - "SequenceVariant": "MTC_SP", - "ScanOptions": "MT", - "SequenceName": "_fl3d1", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "DIS2D"], - "SeriesNumber": 5, - "AcquisitionTime": "14:38:50.942500", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SAR": 0.477038, - "EchoTime": 0.00313, - "RepetitionTime": 0.035, - "FlipAngle": 9, - "PartialFourier": 1, - "BaseResolution": 256, - "ShimSetting": [ - 2552, - 5506, - -7748, - -58, - 212, - 1746, - 24, - -252 ], - "TxRefAmp": 248.964, - "PhaseResolution": 1, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC5-7;NC1,2", - "PulseSequenceDetails": "%SiemensSeq%_gre", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 100, - "PhaseEncodingSteps": 255, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 256, - "ParallelReductionFactorInPlane": 2, - "PixelBandwidth": 260, - "DwellTime": 7.5e-06, - "ImageOrientationPatientDICOM": [ - 1, - 0, - 0, - 0, - 0.946085, - 0.323917 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma_fit", + "InstitutionName": "NU_Tuna", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "Fairbanks_710_Chicago_Chicago_US_60611", + "DeviceSerialNumber": "67034", + "StationName": "MRC35427", + "BodyPartExamined": "CSPINE", + "PatientPosition": "HFS", + "ProcedureStepDescription": "fMRI_STUDIES_DEWALD", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-MT1", + "ProtocolName": "GRE-MT1", + "ScanningSequence": "GR", + "SequenceVariant": "MTC_SP", + "ScanOptions": "MT", + "SequenceName": "_fl3d1", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "DIS2D" + ], + "SeriesNumber": 5, + "AcquisitionTime": "14:38:50.942500", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SAR": 0.477038, + "EchoTime": 0.00313, + "RepetitionTime": 0.035, + "FlipAngle": 9, + "PartialFourier": 1, + "BaseResolution": 256, + "ShimSetting": [ + 2552, + 5506, + -7748, + -58, + 212, + 1746, + 24, + -252 + ], + "TxRefAmp": 248.964, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC5-7;NC1,2", + "PulseSequenceDetails": "%SiemensSeq%_gre", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 255, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "ParallelReductionFactorInPlane": 2, + "PixelBandwidth": 260, + "DwellTime": 7.5e-06, + "ImageOrientationPatientDICOM": [ + 1, + 0, + 0, + 0, + 0.946085, + 0.323917 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-nwu02/anat/sub-nwu02_flip-2_mt-off_space-other_MTS.json b/derivatives/data_preprocessed/sub-nwu02/anat/sub-nwu02_flip-2_mt-off_space-other_MTS.json index e4b2028720..00200acc20 100644 --- a/derivatives/data_preprocessed/sub-nwu02/anat/sub-nwu02_flip-2_mt-off_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-nwu02/anat/sub-nwu02_flip-2_mt-off_space-other_MTS.json @@ -1,64 +1,74 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma_fit", - "InstitutionName": "NU_Tuna", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "Fairbanks_710_Chicago_Chicago_US_60611", - "DeviceSerialNumber": "67034", - "StationName": "MRC35427", - "BodyPartExamined": "CSPINE", - "PatientPosition": "HFS", - "ProcedureStepDescription": "fMRI_STUDIES_DEWALD", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-T1w", - "ProtocolName": "GRE-T1w", - "ScanningSequence": "GR", - "SequenceVariant": "SP", - "SequenceName": "_fl3d1", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "DIS2D"], - "SeriesNumber": 7, - "AcquisitionTime": "14:43:44.857500", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SAR": 0.0309297, - "EchoTime": 0.00313, - "RepetitionTime": 0.015, - "FlipAngle": 15, - "PartialFourier": 1, - "BaseResolution": 256, - "ShimSetting": [ - 2552, - 5506, - -7748, - -58, - 212, - 1746, - 24, - -252 ], - "TxRefAmp": 248.964, - "PhaseResolution": 1, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC5-7;NC1,2", - "PulseSequenceDetails": "%SiemensSeq%_gre", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 100, - "PhaseEncodingSteps": 255, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 256, - "ParallelReductionFactorInPlane": 2, - "PixelBandwidth": 260, - "DwellTime": 7.5e-06, - "ImageOrientationPatientDICOM": [ - 1, - 0, - 0, - 0, - 0.946085, - 0.323917 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma_fit", + "InstitutionName": "NU_Tuna", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "Fairbanks_710_Chicago_Chicago_US_60611", + "DeviceSerialNumber": "67034", + "StationName": "MRC35427", + "BodyPartExamined": "CSPINE", + "PatientPosition": "HFS", + "ProcedureStepDescription": "fMRI_STUDIES_DEWALD", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-T1w", + "ProtocolName": "GRE-T1w", + "ScanningSequence": "GR", + "SequenceVariant": "SP", + "SequenceName": "_fl3d1", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "DIS2D" + ], + "SeriesNumber": 7, + "AcquisitionTime": "14:43:44.857500", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SAR": 0.0309297, + "EchoTime": 0.00313, + "RepetitionTime": 0.015, + "FlipAngle": 15, + "PartialFourier": 1, + "BaseResolution": 256, + "ShimSetting": [ + 2552, + 5506, + -7748, + -58, + 212, + 1746, + 24, + -252 + ], + "TxRefAmp": 248.964, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC5-7;NC1,2", + "PulseSequenceDetails": "%SiemensSeq%_gre", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 255, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "ParallelReductionFactorInPlane": 2, + "PixelBandwidth": 260, + "DwellTime": 7.5e-06, + "ImageOrientationPatientDICOM": [ + 1, + 0, + 0, + 0, + 0.946085, + 0.323917 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-nwu02/anat/sub-nwu02_space-other_T1w.json b/derivatives/data_preprocessed/sub-nwu02/anat/sub-nwu02_space-other_T1w.json index 616e88e963..0eea12249a 100644 --- a/derivatives/data_preprocessed/sub-nwu02/anat/sub-nwu02_space-other_T1w.json +++ b/derivatives/data_preprocessed/sub-nwu02/anat/sub-nwu02_space-other_T1w.json @@ -1,66 +1,79 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma_fit", - "InstitutionName": "NU_Tuna", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "Fairbanks_710_Chicago_Chicago_US_60611", - "DeviceSerialNumber": "67034", - "StationName": "MRC35427", - "BodyPartExamined": "CSPINE", - "PatientPosition": "HFS", - "ProcedureStepDescription": "fMRI_STUDIES_DEWALD", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "T1w", - "ProtocolName": "T1w", - "ScanningSequence": "GR_IR", - "SequenceVariant": "SK_SP_MP", - "ScanOptions": "IR", - "SequenceName": "_tfl3d1_16", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS3D", "DIS2D"], - "SeriesNumber": 2, - "AcquisitionTime": "14:25:38.017500", - "AcquisitionNumber": 1, - "SliceThickness": 1, - "SAR": 0.0561197, - "EchoTime": 0.00372, - "RepetitionTime": 2, - "InversionTime": 1, - "FlipAngle": 9, - "PartialFourier": 1, - "BaseResolution": 320, - "ShimSetting": [ - 2639, - 5490, - -7665, - 208, - -44, - -590, - 119, - -158 ], - "TxRefAmp": 238.23, - "PhaseResolution": 1, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC1-7;NC1,2", - "PulseSequenceDetails": "%SiemensSeq%_tfl", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 81.25, - "PhaseEncodingSteps": 259, - "AcquisitionMatrixPE": 260, - "ReconMatrixPE": 320, - "ParallelReductionFactorInPlane": 2, - "PixelBandwidth": 150, - "DwellTime": 1.04e-05, - "ImageOrientationPatientDICOM": [ - 0, - 1, - 0, - 0, - 0, - -1 ], - "InPlanePhaseEncodingDirectionDICOM": "ROW", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma_fit", + "InstitutionName": "NU_Tuna", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "Fairbanks_710_Chicago_Chicago_US_60611", + "DeviceSerialNumber": "67034", + "StationName": "MRC35427", + "BodyPartExamined": "CSPINE", + "PatientPosition": "HFS", + "ProcedureStepDescription": "fMRI_STUDIES_DEWALD", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "T1w", + "ProtocolName": "T1w", + "ScanningSequence": "GR_IR", + "SequenceVariant": "SK_SP_MP", + "ScanOptions": "IR", + "SequenceName": "_tfl3d1_16", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS3D", + "DIS2D" + ], + "SeriesNumber": 2, + "AcquisitionTime": "14:25:38.017500", + "AcquisitionNumber": 1, + "SliceThickness": 1, + "SAR": 0.0561197, + "EchoTime": 0.00372, + "RepetitionTime": 2, + "InversionTime": 1, + "FlipAngle": 9, + "PartialFourier": 1, + "BaseResolution": 320, + "ShimSetting": [ + 2639, + 5490, + -7665, + 208, + -44, + -590, + 119, + -158 + ], + "TxRefAmp": 238.23, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC1-7;NC1,2", + "PulseSequenceDetails": "%SiemensSeq%_tfl", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 81.25, + "PhaseEncodingSteps": 259, + "AcquisitionMatrixPE": 260, + "ReconMatrixPE": 320, + "ParallelReductionFactorInPlane": 2, + "PixelBandwidth": 150, + "DwellTime": 1.04e-05, + "ImageOrientationPatientDICOM": [ + 0, + 1, + 0, + 0, + 0, + -1 + ], + "InPlanePhaseEncodingDirectionDICOM": "ROW", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-nwu02/anat/sub-nwu02_space-other_T2star.json b/derivatives/data_preprocessed/sub-nwu02/anat/sub-nwu02_space-other_T2star.json index 9b43258ad7..aa427c0703 100644 --- a/derivatives/data_preprocessed/sub-nwu02/anat/sub-nwu02_space-other_T2star.json +++ b/derivatives/data_preprocessed/sub-nwu02/anat/sub-nwu02_space-other_T2star.json @@ -73,5 +73,9 @@ "InPlanePhaseEncodingDirectionDICOM": "COL", "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0", - "AcquisitionDuration": 285.0 + "AcquisitionDuration": 285.0, + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-nwu02/anat/sub-nwu02_space-other_T2w.json b/derivatives/data_preprocessed/sub-nwu02/anat/sub-nwu02_space-other_T2w.json index 26bd5bb8de..b0c9814c1a 100644 --- a/derivatives/data_preprocessed/sub-nwu02/anat/sub-nwu02_space-other_T2w.json +++ b/derivatives/data_preprocessed/sub-nwu02/anat/sub-nwu02_space-other_T2w.json @@ -1,67 +1,80 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma_fit", - "InstitutionName": "NU_Tuna", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "Fairbanks_710_Chicago_Chicago_US_60611", - "DeviceSerialNumber": "67034", - "StationName": "MRC35427", - "BodyPartExamined": "CSPINE", - "PatientPosition": "HFS", - "ProcedureStepDescription": "fMRI_STUDIES_DEWALD", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "T2w", - "ProtocolName": "T2w", - "ScanningSequence": "SE", - "SequenceVariant": "SK_SP_OSP", - "ScanOptions": "PFP", - "SequenceName": "_spcR_100", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS3D", "DIS2D"], - "SeriesNumber": 3, - "AcquisitionTime": "14:30:40.017500", - "AcquisitionNumber": 1, - "SliceThickness": 0.8, - "SAR": 0.417463, - "EchoTime": 0.12, - "RepetitionTime": 1.5, - "FlipAngle": 120, - "PartialFourier": 1, - "BaseResolution": 320, - "ShimSetting": [ - 2639, - 5490, - -7665, - 208, - -44, - -590, - 119, - -158 ], - "TxRefAmp": 238.23, - "PhaseResolution": 1, - "PhaseOversampling": 0.8, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC3-7;NC1,2", - "PulseSequenceDetails": "%SiemensSeq%_tse_vfl", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 100, - "EchoTrainLength": 76, - "PhaseEncodingSteps": 422, - "AcquisitionMatrixPE": 320, - "ReconMatrixPE": 320, - "ParallelReductionFactorInPlane": 3, - "PixelBandwidth": 625, - "DwellTime": 2.5e-06, - "ImageOrientationPatientDICOM": [ - -2.82e-13, - 1, - 4.888e-12, - 0.0575641, - 4.897e-12, - -0.998342 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma_fit", + "InstitutionName": "NU_Tuna", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "Fairbanks_710_Chicago_Chicago_US_60611", + "DeviceSerialNumber": "67034", + "StationName": "MRC35427", + "BodyPartExamined": "CSPINE", + "PatientPosition": "HFS", + "ProcedureStepDescription": "fMRI_STUDIES_DEWALD", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "T2w", + "ProtocolName": "T2w", + "ScanningSequence": "SE", + "SequenceVariant": "SK_SP_OSP", + "ScanOptions": "PFP", + "SequenceName": "_spcR_100", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS3D", + "DIS2D" + ], + "SeriesNumber": 3, + "AcquisitionTime": "14:30:40.017500", + "AcquisitionNumber": 1, + "SliceThickness": 0.8, + "SAR": 0.417463, + "EchoTime": 0.12, + "RepetitionTime": 1.5, + "FlipAngle": 120, + "PartialFourier": 1, + "BaseResolution": 320, + "ShimSetting": [ + 2639, + 5490, + -7665, + 208, + -44, + -590, + 119, + -158 + ], + "TxRefAmp": 238.23, + "PhaseResolution": 1, + "PhaseOversampling": 0.8, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC3-7;NC1,2", + "PulseSequenceDetails": "%SiemensSeq%_tse_vfl", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "EchoTrainLength": 76, + "PhaseEncodingSteps": 422, + "AcquisitionMatrixPE": 320, + "ReconMatrixPE": 320, + "ParallelReductionFactorInPlane": 3, + "PixelBandwidth": 625, + "DwellTime": 2.5e-06, + "ImageOrientationPatientDICOM": [ + -2.82e-13, + 1, + 4.888e-12, + 0.0575641, + 4.897e-12, + -0.998342 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-nwu03/anat/sub-nwu03_flip-1_mt-on_space-other_MTS.json b/derivatives/data_preprocessed/sub-nwu03/anat/sub-nwu03_flip-1_mt-on_space-other_MTS.json index 3d211531e4..b654cf17e2 100644 --- a/derivatives/data_preprocessed/sub-nwu03/anat/sub-nwu03_flip-1_mt-on_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-nwu03/anat/sub-nwu03_flip-1_mt-on_space-other_MTS.json @@ -1,65 +1,75 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma_fit", - "InstitutionName": "NU_Tuna", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "Fairbanks_710_Chicago_Chicago_US_60611", - "DeviceSerialNumber": "67034", - "StationName": "MRC35427", - "BodyPartExamined": "CSPINE", - "PatientPosition": "HFS", - "ProcedureStepDescription": "fMRI_STUDIES_DEWALD", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-MT1", - "ProtocolName": "GRE-MT1", - "ScanningSequence": "GR", - "SequenceVariant": "MTC_SP", - "ScanOptions": "MT", - "SequenceName": "_fl3d1", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "DIS2D"], - "SeriesNumber": 6, - "AcquisitionTime": "13:38:42.065000", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SAR": 0.508577, - "EchoTime": 0.00313, - "RepetitionTime": 0.035, - "FlipAngle": 9, - "PartialFourier": 1, - "BaseResolution": 256, - "ShimSetting": [ - 2619, - 5470, - -7651, - 325, - -468, - 1647, - 276, - -144 ], - "TxRefAmp": 266.907, - "PhaseResolution": 1, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC7;NC1,2", - "PulseSequenceDetails": "%SiemensSeq%_gre", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 100, - "PhaseEncodingSteps": 255, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 256, - "ParallelReductionFactorInPlane": 2, - "PixelBandwidth": 260, - "DwellTime": 7.5e-06, - "ImageOrientationPatientDICOM": [ - 1, - 0, - 0, - 0, - 0.946085, - 0.323917 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma_fit", + "InstitutionName": "NU_Tuna", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "Fairbanks_710_Chicago_Chicago_US_60611", + "DeviceSerialNumber": "67034", + "StationName": "MRC35427", + "BodyPartExamined": "CSPINE", + "PatientPosition": "HFS", + "ProcedureStepDescription": "fMRI_STUDIES_DEWALD", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-MT1", + "ProtocolName": "GRE-MT1", + "ScanningSequence": "GR", + "SequenceVariant": "MTC_SP", + "ScanOptions": "MT", + "SequenceName": "_fl3d1", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "DIS2D" + ], + "SeriesNumber": 6, + "AcquisitionTime": "13:38:42.065000", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SAR": 0.508577, + "EchoTime": 0.00313, + "RepetitionTime": 0.035, + "FlipAngle": 9, + "PartialFourier": 1, + "BaseResolution": 256, + "ShimSetting": [ + 2619, + 5470, + -7651, + 325, + -468, + 1647, + 276, + -144 + ], + "TxRefAmp": 266.907, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC7;NC1,2", + "PulseSequenceDetails": "%SiemensSeq%_gre", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 255, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "ParallelReductionFactorInPlane": 2, + "PixelBandwidth": 260, + "DwellTime": 7.5e-06, + "ImageOrientationPatientDICOM": [ + 1, + 0, + 0, + 0, + 0.946085, + 0.323917 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-nwu03/anat/sub-nwu03_flip-2_mt-off_space-other_MTS.json b/derivatives/data_preprocessed/sub-nwu03/anat/sub-nwu03_flip-2_mt-off_space-other_MTS.json index 326215aa2f..73ab3bd3ca 100644 --- a/derivatives/data_preprocessed/sub-nwu03/anat/sub-nwu03_flip-2_mt-off_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-nwu03/anat/sub-nwu03_flip-2_mt-off_space-other_MTS.json @@ -1,64 +1,74 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma_fit", - "InstitutionName": "NU_Tuna", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "Fairbanks_710_Chicago_Chicago_US_60611", - "DeviceSerialNumber": "67034", - "StationName": "MRC35427", - "BodyPartExamined": "CSPINE", - "PatientPosition": "HFS", - "ProcedureStepDescription": "fMRI_STUDIES_DEWALD", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-T1w", - "ProtocolName": "GRE-T1w", - "ScanningSequence": "GR", - "SequenceVariant": "SP", - "SequenceName": "_fl3d1", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "DIS2D"], - "SeriesNumber": 8, - "AcquisitionTime": "13:43:19.097500", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SAR": 0.0329745, - "EchoTime": 0.00313, - "RepetitionTime": 0.015, - "FlipAngle": 15, - "PartialFourier": 1, - "BaseResolution": 256, - "ShimSetting": [ - 2619, - 5470, - -7651, - 325, - -468, - 1647, - 276, - -144 ], - "TxRefAmp": 266.907, - "PhaseResolution": 1, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC7;NC1,2", - "PulseSequenceDetails": "%SiemensSeq%_gre", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 100, - "PhaseEncodingSteps": 255, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 256, - "ParallelReductionFactorInPlane": 2, - "PixelBandwidth": 260, - "DwellTime": 7.5e-06, - "ImageOrientationPatientDICOM": [ - 1, - 0, - 0, - 0, - 0.946085, - 0.323917 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma_fit", + "InstitutionName": "NU_Tuna", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "Fairbanks_710_Chicago_Chicago_US_60611", + "DeviceSerialNumber": "67034", + "StationName": "MRC35427", + "BodyPartExamined": "CSPINE", + "PatientPosition": "HFS", + "ProcedureStepDescription": "fMRI_STUDIES_DEWALD", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-T1w", + "ProtocolName": "GRE-T1w", + "ScanningSequence": "GR", + "SequenceVariant": "SP", + "SequenceName": "_fl3d1", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "DIS2D" + ], + "SeriesNumber": 8, + "AcquisitionTime": "13:43:19.097500", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SAR": 0.0329745, + "EchoTime": 0.00313, + "RepetitionTime": 0.015, + "FlipAngle": 15, + "PartialFourier": 1, + "BaseResolution": 256, + "ShimSetting": [ + 2619, + 5470, + -7651, + 325, + -468, + 1647, + 276, + -144 + ], + "TxRefAmp": 266.907, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC7;NC1,2", + "PulseSequenceDetails": "%SiemensSeq%_gre", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 255, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "ParallelReductionFactorInPlane": 2, + "PixelBandwidth": 260, + "DwellTime": 7.5e-06, + "ImageOrientationPatientDICOM": [ + 1, + 0, + 0, + 0, + 0.946085, + 0.323917 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-nwu03/anat/sub-nwu03_space-other_T1w.json b/derivatives/data_preprocessed/sub-nwu03/anat/sub-nwu03_space-other_T1w.json index 7f603592cb..466fbf61fa 100644 --- a/derivatives/data_preprocessed/sub-nwu03/anat/sub-nwu03_space-other_T1w.json +++ b/derivatives/data_preprocessed/sub-nwu03/anat/sub-nwu03_space-other_T1w.json @@ -1,66 +1,79 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma_fit", - "InstitutionName": "NU_Tuna", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "Fairbanks_710_Chicago_Chicago_US_60611", - "DeviceSerialNumber": "67034", - "StationName": "MRC35427", - "BodyPartExamined": "CSPINE", - "PatientPosition": "HFS", - "ProcedureStepDescription": "fMRI_STUDIES_DEWALD", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "T1w", - "ProtocolName": "T1w", - "ScanningSequence": "GR_IR", - "SequenceVariant": "SK_SP_MP", - "ScanOptions": "IR", - "SequenceName": "_tfl3d1_16", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS3D", "DIS2D"], - "SeriesNumber": 3, - "AcquisitionTime": "13:25:27.002500", - "AcquisitionNumber": 1, - "SliceThickness": 1, - "SAR": 0.0570124, - "EchoTime": 0.00372, - "RepetitionTime": 2, - "InversionTime": 1, - "FlipAngle": 9, - "PartialFourier": 1, - "BaseResolution": 320, - "ShimSetting": [ - 2639, - 5490, - -7665, - 208, - -44, - -590, - 119, - -158 ], - "TxRefAmp": 252.198, - "PhaseResolution": 1, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC1-7;NC1,2", - "PulseSequenceDetails": "%SiemensSeq%_tfl", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 81.25, - "PhaseEncodingSteps": 259, - "AcquisitionMatrixPE": 260, - "ReconMatrixPE": 320, - "ParallelReductionFactorInPlane": 2, - "PixelBandwidth": 150, - "DwellTime": 1.04e-05, - "ImageOrientationPatientDICOM": [ - 0, - 1, - 0, - 0.0348995, - 0, - -0.999391 ], - "InPlanePhaseEncodingDirectionDICOM": "ROW", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma_fit", + "InstitutionName": "NU_Tuna", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "Fairbanks_710_Chicago_Chicago_US_60611", + "DeviceSerialNumber": "67034", + "StationName": "MRC35427", + "BodyPartExamined": "CSPINE", + "PatientPosition": "HFS", + "ProcedureStepDescription": "fMRI_STUDIES_DEWALD", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "T1w", + "ProtocolName": "T1w", + "ScanningSequence": "GR_IR", + "SequenceVariant": "SK_SP_MP", + "ScanOptions": "IR", + "SequenceName": "_tfl3d1_16", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS3D", + "DIS2D" + ], + "SeriesNumber": 3, + "AcquisitionTime": "13:25:27.002500", + "AcquisitionNumber": 1, + "SliceThickness": 1, + "SAR": 0.0570124, + "EchoTime": 0.00372, + "RepetitionTime": 2, + "InversionTime": 1, + "FlipAngle": 9, + "PartialFourier": 1, + "BaseResolution": 320, + "ShimSetting": [ + 2639, + 5490, + -7665, + 208, + -44, + -590, + 119, + -158 + ], + "TxRefAmp": 252.198, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC1-7;NC1,2", + "PulseSequenceDetails": "%SiemensSeq%_tfl", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 81.25, + "PhaseEncodingSteps": 259, + "AcquisitionMatrixPE": 260, + "ReconMatrixPE": 320, + "ParallelReductionFactorInPlane": 2, + "PixelBandwidth": 150, + "DwellTime": 1.04e-05, + "ImageOrientationPatientDICOM": [ + 0, + 1, + 0, + 0.0348995, + 0, + -0.999391 + ], + "InPlanePhaseEncodingDirectionDICOM": "ROW", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-nwu03/anat/sub-nwu03_space-other_T2star.json b/derivatives/data_preprocessed/sub-nwu03/anat/sub-nwu03_space-other_T2star.json index 544a415eaa..918a53d501 100644 --- a/derivatives/data_preprocessed/sub-nwu03/anat/sub-nwu03_space-other_T2star.json +++ b/derivatives/data_preprocessed/sub-nwu03/anat/sub-nwu03_space-other_T2star.json @@ -73,5 +73,9 @@ "InPlanePhaseEncodingDirectionDICOM": "COL", "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0", - "AcquisitionDuration": 285.0 + "AcquisitionDuration": 285.0, + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-nwu03/anat/sub-nwu03_space-other_T2w.json b/derivatives/data_preprocessed/sub-nwu03/anat/sub-nwu03_space-other_T2w.json index 7634613acb..6013304524 100644 --- a/derivatives/data_preprocessed/sub-nwu03/anat/sub-nwu03_space-other_T2w.json +++ b/derivatives/data_preprocessed/sub-nwu03/anat/sub-nwu03_space-other_T2w.json @@ -1,67 +1,80 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma_fit", - "InstitutionName": "NU_Tuna", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "Fairbanks_710_Chicago_Chicago_US_60611", - "DeviceSerialNumber": "67034", - "StationName": "MRC35427", - "BodyPartExamined": "CSPINE", - "PatientPosition": "HFS", - "ProcedureStepDescription": "fMRI_STUDIES_DEWALD", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "T2w", - "ProtocolName": "T2w", - "ScanningSequence": "SE", - "SequenceVariant": "SK_SP_OSP", - "ScanOptions": "PFP", - "SequenceName": "_spcR_100", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS3D", "DIS2D"], - "SeriesNumber": 4, - "AcquisitionTime": "13:30:29.300000", - "AcquisitionNumber": 1, - "SliceThickness": 0.8, - "SAR": 0.571595, - "EchoTime": 0.12, - "RepetitionTime": 1.5, - "FlipAngle": 120, - "PartialFourier": 1, - "BaseResolution": 320, - "ShimSetting": [ - 2639, - 5490, - -7665, - 208, - -44, - -590, - 119, - -158 ], - "TxRefAmp": 266.907, - "PhaseResolution": 1, - "PhaseOversampling": 0.8, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC5-7;NC1,2", - "PulseSequenceDetails": "%SiemensSeq%_tse_vfl", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 100, - "EchoTrainLength": 76, - "PhaseEncodingSteps": 422, - "AcquisitionMatrixPE": 320, - "ReconMatrixPE": 320, - "ParallelReductionFactorInPlane": 3, - "PixelBandwidth": 625, - "DwellTime": 2.5e-06, - "ImageOrientationPatientDICOM": [ - 0, - 1, - 0, - 0.0348994, - 0, - -0.999391 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma_fit", + "InstitutionName": "NU_Tuna", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "Fairbanks_710_Chicago_Chicago_US_60611", + "DeviceSerialNumber": "67034", + "StationName": "MRC35427", + "BodyPartExamined": "CSPINE", + "PatientPosition": "HFS", + "ProcedureStepDescription": "fMRI_STUDIES_DEWALD", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "T2w", + "ProtocolName": "T2w", + "ScanningSequence": "SE", + "SequenceVariant": "SK_SP_OSP", + "ScanOptions": "PFP", + "SequenceName": "_spcR_100", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS3D", + "DIS2D" + ], + "SeriesNumber": 4, + "AcquisitionTime": "13:30:29.300000", + "AcquisitionNumber": 1, + "SliceThickness": 0.8, + "SAR": 0.571595, + "EchoTime": 0.12, + "RepetitionTime": 1.5, + "FlipAngle": 120, + "PartialFourier": 1, + "BaseResolution": 320, + "ShimSetting": [ + 2639, + 5490, + -7665, + 208, + -44, + -590, + 119, + -158 + ], + "TxRefAmp": 266.907, + "PhaseResolution": 1, + "PhaseOversampling": 0.8, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC5-7;NC1,2", + "PulseSequenceDetails": "%SiemensSeq%_tse_vfl", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "EchoTrainLength": 76, + "PhaseEncodingSteps": 422, + "AcquisitionMatrixPE": 320, + "ReconMatrixPE": 320, + "ParallelReductionFactorInPlane": 3, + "PixelBandwidth": 625, + "DwellTime": 2.5e-06, + "ImageOrientationPatientDICOM": [ + 0, + 1, + 0, + 0.0348994, + 0, + -0.999391 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-nwu04/anat/sub-nwu04_flip-1_mt-on_space-other_MTS.json b/derivatives/data_preprocessed/sub-nwu04/anat/sub-nwu04_flip-1_mt-on_space-other_MTS.json index b71a338c20..af7490a2f9 100644 --- a/derivatives/data_preprocessed/sub-nwu04/anat/sub-nwu04_flip-1_mt-on_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-nwu04/anat/sub-nwu04_flip-1_mt-on_space-other_MTS.json @@ -1,65 +1,75 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma_fit", - "InstitutionName": "NU_Tuna", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "Fairbanks_710_Chicago_Chicago_US_60611", - "DeviceSerialNumber": "67034", - "StationName": "MRC35427", - "BodyPartExamined": "CSPINE", - "PatientPosition": "HFS", - "ProcedureStepDescription": "fMRI_STUDIES_DEWALD", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-MT1", - "ProtocolName": "GRE-MT1", - "ScanningSequence": "GR", - "SequenceVariant": "MTC_SP", - "ScanOptions": "MT", - "SequenceName": "_fl3d1", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "DIS2D"], - "SeriesNumber": 5, - "AcquisitionTime": "14:28:59.482500", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SAR": 0.681531, - "EchoTime": 0.00313, - "RepetitionTime": 0.035, - "FlipAngle": 9, - "PartialFourier": 1, - "BaseResolution": 256, - "ShimSetting": [ - 2634, - 5428, - -7727, - 80, - -82, - 988, - 679, - -297 ], - "TxRefAmp": 323.767, - "PhaseResolution": 1, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC7;NC1,2", - "PulseSequenceDetails": "%SiemensSeq%_gre", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 100, - "PhaseEncodingSteps": 255, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 256, - "ParallelReductionFactorInPlane": 2, - "PixelBandwidth": 260, - "DwellTime": 7.5e-06, - "ImageOrientationPatientDICOM": [ - 1, - 0, - 0, - 0, - 0.996195, - 0.0871557 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma_fit", + "InstitutionName": "NU_Tuna", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "Fairbanks_710_Chicago_Chicago_US_60611", + "DeviceSerialNumber": "67034", + "StationName": "MRC35427", + "BodyPartExamined": "CSPINE", + "PatientPosition": "HFS", + "ProcedureStepDescription": "fMRI_STUDIES_DEWALD", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-MT1", + "ProtocolName": "GRE-MT1", + "ScanningSequence": "GR", + "SequenceVariant": "MTC_SP", + "ScanOptions": "MT", + "SequenceName": "_fl3d1", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "DIS2D" + ], + "SeriesNumber": 5, + "AcquisitionTime": "14:28:59.482500", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SAR": 0.681531, + "EchoTime": 0.00313, + "RepetitionTime": 0.035, + "FlipAngle": 9, + "PartialFourier": 1, + "BaseResolution": 256, + "ShimSetting": [ + 2634, + 5428, + -7727, + 80, + -82, + 988, + 679, + -297 + ], + "TxRefAmp": 323.767, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC7;NC1,2", + "PulseSequenceDetails": "%SiemensSeq%_gre", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 255, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "ParallelReductionFactorInPlane": 2, + "PixelBandwidth": 260, + "DwellTime": 7.5e-06, + "ImageOrientationPatientDICOM": [ + 1, + 0, + 0, + 0, + 0.996195, + 0.0871557 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-nwu04/anat/sub-nwu04_flip-2_mt-off_space-other_MTS.json b/derivatives/data_preprocessed/sub-nwu04/anat/sub-nwu04_flip-2_mt-off_space-other_MTS.json index c6b84089c5..29473e9a25 100644 --- a/derivatives/data_preprocessed/sub-nwu04/anat/sub-nwu04_flip-2_mt-off_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-nwu04/anat/sub-nwu04_flip-2_mt-off_space-other_MTS.json @@ -1,64 +1,74 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma_fit", - "InstitutionName": "NU_Tuna", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "Fairbanks_710_Chicago_Chicago_US_60611", - "DeviceSerialNumber": "67034", - "StationName": "MRC35427", - "BodyPartExamined": "CSPINE", - "PatientPosition": "HFS", - "ProcedureStepDescription": "fMRI_STUDIES_DEWALD", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-T1w", - "ProtocolName": "GRE-T1w", - "ScanningSequence": "GR", - "SequenceVariant": "SP", - "SequenceName": "_fl3d1", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "DIS2D"], - "SeriesNumber": 7, - "AcquisitionTime": "14:33:30.957500", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SAR": 0.0441884, - "EchoTime": 0.00313, - "RepetitionTime": 0.015, - "FlipAngle": 15, - "PartialFourier": 1, - "BaseResolution": 256, - "ShimSetting": [ - 2634, - 5428, - -7727, - 80, - -82, - 988, - 679, - -297 ], - "TxRefAmp": 323.767, - "PhaseResolution": 1, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC7;NC1,2", - "PulseSequenceDetails": "%SiemensSeq%_gre", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 100, - "PhaseEncodingSteps": 255, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 256, - "ParallelReductionFactorInPlane": 2, - "PixelBandwidth": 260, - "DwellTime": 7.5e-06, - "ImageOrientationPatientDICOM": [ - 1, - 0, - 0, - 0, - 0.996195, - 0.0871557 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma_fit", + "InstitutionName": "NU_Tuna", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "Fairbanks_710_Chicago_Chicago_US_60611", + "DeviceSerialNumber": "67034", + "StationName": "MRC35427", + "BodyPartExamined": "CSPINE", + "PatientPosition": "HFS", + "ProcedureStepDescription": "fMRI_STUDIES_DEWALD", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-T1w", + "ProtocolName": "GRE-T1w", + "ScanningSequence": "GR", + "SequenceVariant": "SP", + "SequenceName": "_fl3d1", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "DIS2D" + ], + "SeriesNumber": 7, + "AcquisitionTime": "14:33:30.957500", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SAR": 0.0441884, + "EchoTime": 0.00313, + "RepetitionTime": 0.015, + "FlipAngle": 15, + "PartialFourier": 1, + "BaseResolution": 256, + "ShimSetting": [ + 2634, + 5428, + -7727, + 80, + -82, + 988, + 679, + -297 + ], + "TxRefAmp": 323.767, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC7;NC1,2", + "PulseSequenceDetails": "%SiemensSeq%_gre", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 255, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "ParallelReductionFactorInPlane": 2, + "PixelBandwidth": 260, + "DwellTime": 7.5e-06, + "ImageOrientationPatientDICOM": [ + 1, + 0, + 0, + 0, + 0.996195, + 0.0871557 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-nwu04/anat/sub-nwu04_space-other_T1w.json b/derivatives/data_preprocessed/sub-nwu04/anat/sub-nwu04_space-other_T1w.json index a460b75147..d75da1fc6f 100644 --- a/derivatives/data_preprocessed/sub-nwu04/anat/sub-nwu04_space-other_T1w.json +++ b/derivatives/data_preprocessed/sub-nwu04/anat/sub-nwu04_space-other_T1w.json @@ -1,66 +1,79 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma_fit", - "InstitutionName": "NU_Tuna", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "Fairbanks_710_Chicago_Chicago_US_60611", - "DeviceSerialNumber": "67034", - "StationName": "MRC35427", - "BodyPartExamined": "CSPINE", - "PatientPosition": "HFS", - "ProcedureStepDescription": "fMRI_STUDIES_DEWALD", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "T1w", - "ProtocolName": "T1w", - "ScanningSequence": "GR_IR", - "SequenceVariant": "SK_SP_MP", - "ScanOptions": "IR", - "SequenceName": "_tfl3d1_16", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS3D", "DIS2D"], - "SeriesNumber": 2, - "AcquisitionTime": "14:14:46.007500", - "AcquisitionNumber": 1, - "SliceThickness": 1, - "SAR": 0.0694282, - "EchoTime": 0.00372, - "RepetitionTime": 2, - "InversionTime": 1, - "FlipAngle": 9, - "PartialFourier": 1, - "BaseResolution": 320, - "ShimSetting": [ - 2639, - 5490, - -7665, - 208, - -44, - -590, - 119, - -158 ], - "TxRefAmp": 286.522, - "PhaseResolution": 1, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC1-7;NC1,2", - "PulseSequenceDetails": "%SiemensSeq%_tfl", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 81.25, - "PhaseEncodingSteps": 259, - "AcquisitionMatrixPE": 260, - "ReconMatrixPE": 320, - "ParallelReductionFactorInPlane": 2, - "PixelBandwidth": 150, - "DwellTime": 1.04e-05, - "ImageOrientationPatientDICOM": [ - 0, - 1, - 0, - 0, - 0, - -1 ], - "InPlanePhaseEncodingDirectionDICOM": "ROW", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma_fit", + "InstitutionName": "NU_Tuna", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "Fairbanks_710_Chicago_Chicago_US_60611", + "DeviceSerialNumber": "67034", + "StationName": "MRC35427", + "BodyPartExamined": "CSPINE", + "PatientPosition": "HFS", + "ProcedureStepDescription": "fMRI_STUDIES_DEWALD", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "T1w", + "ProtocolName": "T1w", + "ScanningSequence": "GR_IR", + "SequenceVariant": "SK_SP_MP", + "ScanOptions": "IR", + "SequenceName": "_tfl3d1_16", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS3D", + "DIS2D" + ], + "SeriesNumber": 2, + "AcquisitionTime": "14:14:46.007500", + "AcquisitionNumber": 1, + "SliceThickness": 1, + "SAR": 0.0694282, + "EchoTime": 0.00372, + "RepetitionTime": 2, + "InversionTime": 1, + "FlipAngle": 9, + "PartialFourier": 1, + "BaseResolution": 320, + "ShimSetting": [ + 2639, + 5490, + -7665, + 208, + -44, + -590, + 119, + -158 + ], + "TxRefAmp": 286.522, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC1-7;NC1,2", + "PulseSequenceDetails": "%SiemensSeq%_tfl", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 81.25, + "PhaseEncodingSteps": 259, + "AcquisitionMatrixPE": 260, + "ReconMatrixPE": 320, + "ParallelReductionFactorInPlane": 2, + "PixelBandwidth": 150, + "DwellTime": 1.04e-05, + "ImageOrientationPatientDICOM": [ + 0, + 1, + 0, + 0, + 0, + -1 + ], + "InPlanePhaseEncodingDirectionDICOM": "ROW", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-nwu04/anat/sub-nwu04_space-other_T2star.json b/derivatives/data_preprocessed/sub-nwu04/anat/sub-nwu04_space-other_T2star.json index b0d41bd22f..ab529ee0eb 100644 --- a/derivatives/data_preprocessed/sub-nwu04/anat/sub-nwu04_space-other_T2star.json +++ b/derivatives/data_preprocessed/sub-nwu04/anat/sub-nwu04_space-other_T2star.json @@ -73,5 +73,9 @@ "InPlanePhaseEncodingDirectionDICOM": "COL", "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0", - "AcquisitionDuration": 285.0 + "AcquisitionDuration": 285.0, + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-nwu04/anat/sub-nwu04_space-other_T2w.json b/derivatives/data_preprocessed/sub-nwu04/anat/sub-nwu04_space-other_T2w.json index 336217f2e8..d58a98d458 100644 --- a/derivatives/data_preprocessed/sub-nwu04/anat/sub-nwu04_space-other_T2w.json +++ b/derivatives/data_preprocessed/sub-nwu04/anat/sub-nwu04_space-other_T2w.json @@ -1,67 +1,80 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma_fit", - "InstitutionName": "NU_Tuna", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "Fairbanks_710_Chicago_Chicago_US_60611", - "DeviceSerialNumber": "67034", - "StationName": "MRC35427", - "BodyPartExamined": "CSPINE", - "PatientPosition": "HFS", - "ProcedureStepDescription": "fMRI_STUDIES_DEWALD", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "T2w", - "ProtocolName": "T2w", - "ScanningSequence": "SE", - "SequenceVariant": "SK_SP_OSP", - "ScanOptions": "PFP_SAT1", - "SequenceName": "_spcR_100", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS3D", "DIS2D"], - "SeriesNumber": 3, - "AcquisitionTime": "14:20:6.752500", - "AcquisitionNumber": 1, - "SliceThickness": 0.8, - "SAR": 0.697838, - "EchoTime": 0.12, - "RepetitionTime": 1.5, - "FlipAngle": 120, - "PartialFourier": 1, - "BaseResolution": 320, - "ShimSetting": [ - 2639, - 5490, - -7665, - 208, - -44, - -590, - 119, - -158 ], - "TxRefAmp": 323.767, - "PhaseResolution": 1, - "PhaseOversampling": 0.8, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC5-7;NC1,2", - "PulseSequenceDetails": "%SiemensSeq%_tse_vfl", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 100, - "EchoTrainLength": 76, - "PhaseEncodingSteps": 422, - "AcquisitionMatrixPE": 320, - "ReconMatrixPE": 320, - "ParallelReductionFactorInPlane": 3, - "PixelBandwidth": 625, - "DwellTime": 2.5e-06, - "ImageOrientationPatientDICOM": [ - 0, - 1, - 0, - 0, - 0, - -1 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma_fit", + "InstitutionName": "NU_Tuna", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "Fairbanks_710_Chicago_Chicago_US_60611", + "DeviceSerialNumber": "67034", + "StationName": "MRC35427", + "BodyPartExamined": "CSPINE", + "PatientPosition": "HFS", + "ProcedureStepDescription": "fMRI_STUDIES_DEWALD", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "T2w", + "ProtocolName": "T2w", + "ScanningSequence": "SE", + "SequenceVariant": "SK_SP_OSP", + "ScanOptions": "PFP_SAT1", + "SequenceName": "_spcR_100", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS3D", + "DIS2D" + ], + "SeriesNumber": 3, + "AcquisitionTime": "14:20:6.752500", + "AcquisitionNumber": 1, + "SliceThickness": 0.8, + "SAR": 0.697838, + "EchoTime": 0.12, + "RepetitionTime": 1.5, + "FlipAngle": 120, + "PartialFourier": 1, + "BaseResolution": 320, + "ShimSetting": [ + 2639, + 5490, + -7665, + 208, + -44, + -590, + 119, + -158 + ], + "TxRefAmp": 323.767, + "PhaseResolution": 1, + "PhaseOversampling": 0.8, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC5-7;NC1,2", + "PulseSequenceDetails": "%SiemensSeq%_tse_vfl", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "EchoTrainLength": 76, + "PhaseEncodingSteps": 422, + "AcquisitionMatrixPE": 320, + "ReconMatrixPE": 320, + "ParallelReductionFactorInPlane": 3, + "PixelBandwidth": 625, + "DwellTime": 2.5e-06, + "ImageOrientationPatientDICOM": [ + 0, + 1, + 0, + 0, + 0, + -1 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-nwu05/anat/sub-nwu05_flip-1_mt-on_space-other_MTS.json b/derivatives/data_preprocessed/sub-nwu05/anat/sub-nwu05_flip-1_mt-on_space-other_MTS.json index 1622904ea6..a88d6d17d8 100644 --- a/derivatives/data_preprocessed/sub-nwu05/anat/sub-nwu05_flip-1_mt-on_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-nwu05/anat/sub-nwu05_flip-1_mt-on_space-other_MTS.json @@ -1,65 +1,75 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma_fit", - "InstitutionName": "NU_Tuna", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "Fairbanks_710_Chicago_Chicago_US_60611", - "DeviceSerialNumber": "67034", - "StationName": "MRC35427", - "BodyPartExamined": "CSPINE", - "PatientPosition": "HFS", - "ProcedureStepDescription": "fMRI_STUDIES_DEWALD", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-MT1", - 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0.992115, - 0.125333 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma_fit", + "InstitutionName": "NU_Tuna", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "Fairbanks_710_Chicago_Chicago_US_60611", + "DeviceSerialNumber": "67034", + "StationName": "MRC35427", + "BodyPartExamined": "CSPINE", + "PatientPosition": "HFS", + "ProcedureStepDescription": "fMRI_STUDIES_DEWALD", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-MT1", + "ProtocolName": "GRE-MT1", + "ScanningSequence": "GR", + "SequenceVariant": "MTC_SP", + "ScanOptions": "MT", + "SequenceName": "_fl3d1", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "DIS2D" + ], + "SeriesNumber": 5, + "AcquisitionTime": "15:04:22.182500", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SAR": 0.815861, + "EchoTime": 0.00313, + "RepetitionTime": 0.035, + "FlipAngle": 9, + "PartialFourier": 1, + "BaseResolution": 256, + "ShimSetting": [ + 2592, + 5407, + -7758, + -519, + -320, + 1132, + 277, + 43 + ], + "TxRefAmp": 313.219, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC7;NC1,2", + "PulseSequenceDetails": "%SiemensSeq%_gre", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 255, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "ParallelReductionFactorInPlane": 2, + "PixelBandwidth": 260, + "DwellTime": 7.5e-06, + "ImageOrientationPatientDICOM": [ + 1, + 0, + 0, + 0, + 0.992115, + 0.125333 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-nwu05/anat/sub-nwu05_flip-2_mt-off_space-other_MTS.json b/derivatives/data_preprocessed/sub-nwu05/anat/sub-nwu05_flip-2_mt-off_space-other_MTS.json index e0a046b876..42f230de11 100644 --- a/derivatives/data_preprocessed/sub-nwu05/anat/sub-nwu05_flip-2_mt-off_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-nwu05/anat/sub-nwu05_flip-2_mt-off_space-other_MTS.json @@ -1,64 +1,74 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma_fit", - "InstitutionName": "NU_Tuna", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "Fairbanks_710_Chicago_Chicago_US_60611", - "DeviceSerialNumber": "67034", - "StationName": "MRC35427", - "BodyPartExamined": "CSPINE", - "PatientPosition": "HFS", - "ProcedureStepDescription": "fMRI_STUDIES_DEWALD", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-T1w", - "ProtocolName": "GRE-T1w", - "ScanningSequence": "GR", - "SequenceVariant": "SP", - "SequenceName": "_fl3d1", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "DIS2D"], - "SeriesNumber": 7, - "AcquisitionTime": "15:09:24.777500", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SAR": 0.0528979, - "EchoTime": 0.00313, - "RepetitionTime": 0.015, - "FlipAngle": 15, - "PartialFourier": 1, - "BaseResolution": 256, - "ShimSetting": [ - 2592, - 5407, - -7758, - -519, - -320, - 1132, - 277, - 43 ], - "TxRefAmp": 313.219, - "PhaseResolution": 1, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC7;NC1,2", - "PulseSequenceDetails": "%SiemensSeq%_gre", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 100, - "PhaseEncodingSteps": 255, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 256, - "ParallelReductionFactorInPlane": 2, - "PixelBandwidth": 260, - "DwellTime": 7.5e-06, - "ImageOrientationPatientDICOM": [ - 1, - 0, - 0, - 0, - 0.992115, - 0.125333 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma_fit", + "InstitutionName": "NU_Tuna", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "Fairbanks_710_Chicago_Chicago_US_60611", + "DeviceSerialNumber": "67034", + "StationName": "MRC35427", + "BodyPartExamined": "CSPINE", + "PatientPosition": "HFS", + "ProcedureStepDescription": "fMRI_STUDIES_DEWALD", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-T1w", + "ProtocolName": "GRE-T1w", + "ScanningSequence": "GR", + "SequenceVariant": "SP", + "SequenceName": "_fl3d1", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "DIS2D" + ], + "SeriesNumber": 7, + "AcquisitionTime": "15:09:24.777500", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SAR": 0.0528979, + "EchoTime": 0.00313, + "RepetitionTime": 0.015, + "FlipAngle": 15, + "PartialFourier": 1, + "BaseResolution": 256, + "ShimSetting": [ + 2592, + 5407, + -7758, + -519, + -320, + 1132, + 277, + 43 + ], + "TxRefAmp": 313.219, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC7;NC1,2", + "PulseSequenceDetails": "%SiemensSeq%_gre", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 255, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "ParallelReductionFactorInPlane": 2, + "PixelBandwidth": 260, + "DwellTime": 7.5e-06, + "ImageOrientationPatientDICOM": [ + 1, + 0, + 0, + 0, + 0.992115, + 0.125333 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-nwu05/anat/sub-nwu05_space-other_T1w.json b/derivatives/data_preprocessed/sub-nwu05/anat/sub-nwu05_space-other_T1w.json index 3e599f8a25..5a0562b684 100644 --- a/derivatives/data_preprocessed/sub-nwu05/anat/sub-nwu05_space-other_T1w.json +++ b/derivatives/data_preprocessed/sub-nwu05/anat/sub-nwu05_space-other_T1w.json @@ -1,66 +1,79 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma_fit", - "InstitutionName": "NU_Tuna", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "Fairbanks_710_Chicago_Chicago_US_60611", - "DeviceSerialNumber": "67034", - "StationName": "MRC35427", - "BodyPartExamined": "CSPINE", - "PatientPosition": "HFS", - "ProcedureStepDescription": "fMRI_STUDIES_DEWALD", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "T1w", - "ProtocolName": "T1w", - "ScanningSequence": "GR_IR", - "SequenceVariant": "SK_SP_MP", - "ScanOptions": "IR", - "SequenceName": "_tfl3d1_16", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS3D", "DIS2D"], - "SeriesNumber": 2, - "AcquisitionTime": "14:51:15.030000", - "AcquisitionNumber": 1, - "SliceThickness": 1, - "SAR": 0.0896526, - "EchoTime": 0.00372, - "RepetitionTime": 2, - "InversionTime": 1, - "FlipAngle": 9, - "PartialFourier": 1, - "BaseResolution": 320, - "ShimSetting": [ - 2639, - 5490, - -7665, - 208, - -44, - -590, - 119, - -158 ], - "TxRefAmp": 288.07, - "PhaseResolution": 1, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC1-7;NC1,2", - "PulseSequenceDetails": "%SiemensSeq%_tfl", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 81.25, - "PhaseEncodingSteps": 259, - "AcquisitionMatrixPE": 260, - "ReconMatrixPE": 320, - "ParallelReductionFactorInPlane": 2, - "PixelBandwidth": 150, - "DwellTime": 1.04e-05, - "ImageOrientationPatientDICOM": [ - 0, - 1, - 0, - 0, - 0, - -1 ], - "InPlanePhaseEncodingDirectionDICOM": "ROW", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma_fit", + "InstitutionName": "NU_Tuna", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "Fairbanks_710_Chicago_Chicago_US_60611", + "DeviceSerialNumber": "67034", + "StationName": "MRC35427", + "BodyPartExamined": "CSPINE", + "PatientPosition": "HFS", + "ProcedureStepDescription": "fMRI_STUDIES_DEWALD", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "T1w", + "ProtocolName": "T1w", + "ScanningSequence": "GR_IR", + "SequenceVariant": "SK_SP_MP", + "ScanOptions": "IR", + "SequenceName": "_tfl3d1_16", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS3D", + "DIS2D" + ], + "SeriesNumber": 2, + "AcquisitionTime": "14:51:15.030000", + "AcquisitionNumber": 1, + "SliceThickness": 1, + "SAR": 0.0896526, + "EchoTime": 0.00372, + "RepetitionTime": 2, + "InversionTime": 1, + "FlipAngle": 9, + "PartialFourier": 1, + "BaseResolution": 320, + "ShimSetting": [ + 2639, + 5490, + -7665, + 208, + -44, + -590, + 119, + -158 + ], + "TxRefAmp": 288.07, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC1-7;NC1,2", + "PulseSequenceDetails": "%SiemensSeq%_tfl", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 81.25, + "PhaseEncodingSteps": 259, + "AcquisitionMatrixPE": 260, + "ReconMatrixPE": 320, + "ParallelReductionFactorInPlane": 2, + "PixelBandwidth": 150, + "DwellTime": 1.04e-05, + "ImageOrientationPatientDICOM": [ + 0, + 1, + 0, + 0, + 0, + -1 + ], + "InPlanePhaseEncodingDirectionDICOM": "ROW", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-nwu05/anat/sub-nwu05_space-other_T2star.json b/derivatives/data_preprocessed/sub-nwu05/anat/sub-nwu05_space-other_T2star.json index 10c95e0b4a..03da61882c 100644 --- a/derivatives/data_preprocessed/sub-nwu05/anat/sub-nwu05_space-other_T2star.json +++ b/derivatives/data_preprocessed/sub-nwu05/anat/sub-nwu05_space-other_T2star.json @@ -73,5 +73,9 @@ "InPlanePhaseEncodingDirectionDICOM": "COL", "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0", - "AcquisitionDuration": 285.0 + "AcquisitionDuration": 285.0, + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-nwu05/anat/sub-nwu05_space-other_T2w.json b/derivatives/data_preprocessed/sub-nwu05/anat/sub-nwu05_space-other_T2w.json index df25785250..636d3edd06 100644 --- a/derivatives/data_preprocessed/sub-nwu05/anat/sub-nwu05_space-other_T2w.json +++ b/derivatives/data_preprocessed/sub-nwu05/anat/sub-nwu05_space-other_T2w.json @@ -1,67 +1,80 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma_fit", - "InstitutionName": "NU_Tuna", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "Fairbanks_710_Chicago_Chicago_US_60611", - "DeviceSerialNumber": "67034", - "StationName": "MRC35427", - "BodyPartExamined": "CSPINE", - "PatientPosition": "HFS", - "ProcedureStepDescription": "fMRI_STUDIES_DEWALD", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "T2w", - "ProtocolName": "T2w", - "ScanningSequence": "SE", - "SequenceVariant": "SK_SP_OSP", - "ScanOptions": "PFP", - "SequenceName": "_spcR_100", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS3D", "DIS2D"], - "SeriesNumber": 3, - "AcquisitionTime": "14:56:31.157500", - "AcquisitionNumber": 1, - "SliceThickness": 0.8, - "SAR": 0.824888, - "EchoTime": 0.12, - "RepetitionTime": 1.5, - "FlipAngle": 120, - "PartialFourier": 1, - "BaseResolution": 320, - "ShimSetting": [ - 2639, - 5490, - -7665, - 208, - -44, - -590, - 119, - -158 ], - "TxRefAmp": 313.219, - "PhaseResolution": 1, - "PhaseOversampling": 0.8, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC5-7;NC1,2", - "PulseSequenceDetails": "%SiemensSeq%_tse_vfl", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 100, - "EchoTrainLength": 76, - "PhaseEncodingSteps": 422, - "AcquisitionMatrixPE": 320, - "ReconMatrixPE": 320, - "ParallelReductionFactorInPlane": 3, - "PixelBandwidth": 625, - "DwellTime": 2.5e-06, - "ImageOrientationPatientDICOM": [ - -1.28e-13, - 1, - 4.895e-12, - 0.0261769, - 4.897e-12, - -0.999657 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma_fit", + "InstitutionName": "NU_Tuna", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "Fairbanks_710_Chicago_Chicago_US_60611", + "DeviceSerialNumber": "67034", + "StationName": "MRC35427", + "BodyPartExamined": "CSPINE", + "PatientPosition": "HFS", + "ProcedureStepDescription": "fMRI_STUDIES_DEWALD", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "T2w", + "ProtocolName": "T2w", + "ScanningSequence": "SE", + "SequenceVariant": "SK_SP_OSP", + "ScanOptions": "PFP", + "SequenceName": "_spcR_100", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS3D", + "DIS2D" + ], + "SeriesNumber": 3, + "AcquisitionTime": "14:56:31.157500", + "AcquisitionNumber": 1, + "SliceThickness": 0.8, + "SAR": 0.824888, + "EchoTime": 0.12, + "RepetitionTime": 1.5, + "FlipAngle": 120, + "PartialFourier": 1, + "BaseResolution": 320, + "ShimSetting": [ + 2639, + 5490, + -7665, + 208, + -44, + -590, + 119, + -158 + ], + "TxRefAmp": 313.219, + "PhaseResolution": 1, + "PhaseOversampling": 0.8, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC5-7;NC1,2", + "PulseSequenceDetails": "%SiemensSeq%_tse_vfl", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "EchoTrainLength": 76, + "PhaseEncodingSteps": 422, + "AcquisitionMatrixPE": 320, + "ReconMatrixPE": 320, + "ParallelReductionFactorInPlane": 3, + "PixelBandwidth": 625, + "DwellTime": 2.5e-06, + "ImageOrientationPatientDICOM": [ + -1.28e-13, + 1, + 4.895e-12, + 0.0261769, + 4.897e-12, + -0.999657 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-nwu06/anat/sub-nwu06_flip-1_mt-on_space-other_MTS.json b/derivatives/data_preprocessed/sub-nwu06/anat/sub-nwu06_flip-1_mt-on_space-other_MTS.json index c9ee0da2c2..5eded32069 100644 --- a/derivatives/data_preprocessed/sub-nwu06/anat/sub-nwu06_flip-1_mt-on_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-nwu06/anat/sub-nwu06_flip-1_mt-on_space-other_MTS.json @@ -1,65 +1,75 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma_fit", - "InstitutionName": "NU_Tuna", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "Fairbanks_710_Chicago_Chicago_US_60611", - "DeviceSerialNumber": "67034", - "StationName": "MRC35427", - "BodyPartExamined": "BRAIN", - "PatientPosition": "HFS", - "ProcedureStepDescription": "fMRI_STUDIES_DEWALD", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-MT1", - "ProtocolName": "GRE-MT1", - "ScanningSequence": "GR", - "SequenceVariant": "MTC_SP", - "ScanOptions": "MT", - "SequenceName": "_fl3d1", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "DIS2D"], - "SeriesNumber": 5, - "AcquisitionTime": "14:08:50.395000", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SAR": 0.495247, - "EchoTime": 0.00313, - "RepetitionTime": 0.035, - "FlipAngle": 9, - "PartialFourier": 1, - "BaseResolution": 256, - "ShimSetting": [ - 2640, - 5444, - -7868, - 75, - -118, - 1701, - 39, - -414 ], - "TxRefAmp": 260.938, - "PhaseResolution": 1, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC7;NC1,2", - "PulseSequenceDetails": "%SiemensSeq%_gre", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 100, - "PhaseEncodingSteps": 255, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 256, - "ParallelReductionFactorInPlane": 2, - "PixelBandwidth": 260, - "DwellTime": 7.5e-06, - "ImageOrientationPatientDICOM": [ - 1, - 0, - 0, - 0, - 0.996041, - 0.0888943 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma_fit", + "InstitutionName": "NU_Tuna", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "Fairbanks_710_Chicago_Chicago_US_60611", + "DeviceSerialNumber": "67034", + "StationName": "MRC35427", + "BodyPartExamined": "BRAIN", + "PatientPosition": "HFS", + "ProcedureStepDescription": "fMRI_STUDIES_DEWALD", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-MT1", + "ProtocolName": "GRE-MT1", + "ScanningSequence": "GR", + "SequenceVariant": "MTC_SP", + "ScanOptions": "MT", + "SequenceName": "_fl3d1", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "DIS2D" + ], + "SeriesNumber": 5, + "AcquisitionTime": "14:08:50.395000", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SAR": 0.495247, + "EchoTime": 0.00313, + "RepetitionTime": 0.035, + "FlipAngle": 9, + "PartialFourier": 1, + "BaseResolution": 256, + "ShimSetting": [ + 2640, + 5444, + -7868, + 75, + -118, + 1701, + 39, + -414 + ], + "TxRefAmp": 260.938, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC7;NC1,2", + "PulseSequenceDetails": "%SiemensSeq%_gre", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 255, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "ParallelReductionFactorInPlane": 2, + "PixelBandwidth": 260, + "DwellTime": 7.5e-06, + "ImageOrientationPatientDICOM": [ + 1, + 0, + 0, + 0, + 0.996041, + 0.0888943 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-nwu06/anat/sub-nwu06_flip-2_mt-off_space-other_MTS.json b/derivatives/data_preprocessed/sub-nwu06/anat/sub-nwu06_flip-2_mt-off_space-other_MTS.json index 4cfa789d0a..f89e76e988 100644 --- a/derivatives/data_preprocessed/sub-nwu06/anat/sub-nwu06_flip-2_mt-off_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-nwu06/anat/sub-nwu06_flip-2_mt-off_space-other_MTS.json @@ -1,64 +1,74 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma_fit", - "InstitutionName": "NU_Tuna", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "Fairbanks_710_Chicago_Chicago_US_60611", - "DeviceSerialNumber": "67034", - "StationName": "MRC35427", - "BodyPartExamined": "BRAIN", - "PatientPosition": "HFS", - "ProcedureStepDescription": "fMRI_STUDIES_DEWALD", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-T1w", - "ProtocolName": "GRE-T1w", - "ScanningSequence": "GR", - "SequenceVariant": "SP", - "SequenceName": "_fl3d1", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "DIS2D"], - "SeriesNumber": 7, - "AcquisitionTime": "14:13:41.557500", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SAR": 0.0321103, - "EchoTime": 0.00313, - "RepetitionTime": 0.015, - "FlipAngle": 15, - "PartialFourier": 1, - "BaseResolution": 256, - "ShimSetting": [ - 2640, - 5444, - -7868, - 75, - -118, - 1701, - 39, - -414 ], - "TxRefAmp": 260.938, - "PhaseResolution": 1, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC7;NC1,2", - "PulseSequenceDetails": "%SiemensSeq%_gre", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 100, - "PhaseEncodingSteps": 255, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 256, - "ParallelReductionFactorInPlane": 2, - "PixelBandwidth": 260, - "DwellTime": 7.5e-06, - "ImageOrientationPatientDICOM": [ - 1, - 0, - 0, - 0, - 0.996041, - 0.0888943 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma_fit", + "InstitutionName": "NU_Tuna", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "Fairbanks_710_Chicago_Chicago_US_60611", + "DeviceSerialNumber": "67034", + "StationName": "MRC35427", + "BodyPartExamined": "BRAIN", + "PatientPosition": "HFS", + "ProcedureStepDescription": "fMRI_STUDIES_DEWALD", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-T1w", + "ProtocolName": "GRE-T1w", + "ScanningSequence": "GR", + "SequenceVariant": "SP", + "SequenceName": "_fl3d1", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "DIS2D" + ], + "SeriesNumber": 7, + "AcquisitionTime": "14:13:41.557500", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SAR": 0.0321103, + "EchoTime": 0.00313, + "RepetitionTime": 0.015, + "FlipAngle": 15, + "PartialFourier": 1, + "BaseResolution": 256, + "ShimSetting": [ + 2640, + 5444, + -7868, + 75, + -118, + 1701, + 39, + -414 + ], + "TxRefAmp": 260.938, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC7;NC1,2", + "PulseSequenceDetails": "%SiemensSeq%_gre", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 255, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "ParallelReductionFactorInPlane": 2, + "PixelBandwidth": 260, + "DwellTime": 7.5e-06, + "ImageOrientationPatientDICOM": [ + 1, + 0, + 0, + 0, + 0.996041, + 0.0888943 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-nwu06/anat/sub-nwu06_space-other_T1w.json b/derivatives/data_preprocessed/sub-nwu06/anat/sub-nwu06_space-other_T1w.json index 239a800b13..51fdcfd098 100644 --- a/derivatives/data_preprocessed/sub-nwu06/anat/sub-nwu06_space-other_T1w.json +++ b/derivatives/data_preprocessed/sub-nwu06/anat/sub-nwu06_space-other_T1w.json @@ -1,66 +1,79 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma_fit", - "InstitutionName": "NU_Tuna", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "Fairbanks_710_Chicago_Chicago_US_60611", - "DeviceSerialNumber": "67034", - "StationName": "MRC35427", - "BodyPartExamined": "BRAIN", - "PatientPosition": "HFS", - "ProcedureStepDescription": "fMRI_STUDIES_DEWALD", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "T1w", - "ProtocolName": "T1w", - "ScanningSequence": "GR_IR", - "SequenceVariant": "SK_SP_MP", - "ScanOptions": "IR", - "SequenceName": "_tfl3d1_16", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS3D", "DIS2D"], - "SeriesNumber": 2, - "AcquisitionTime": "13:55:36.010000", - "AcquisitionNumber": 1, - "SliceThickness": 1, - "SAR": 0.0555161, - "EchoTime": 0.00372, - "RepetitionTime": 2, - "InversionTime": 1, - "FlipAngle": 9, - "PartialFourier": 1, - "BaseResolution": 320, - "ShimSetting": [ - 2639, - 5490, - -7665, - 208, - -44, - -590, - 119, - -158 ], - "TxRefAmp": 243.668, - "PhaseResolution": 1, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC1-7;NC1,2", - "PulseSequenceDetails": "%SiemensSeq%_tfl", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 81.25, - "PhaseEncodingSteps": 259, - "AcquisitionMatrixPE": 260, - "ReconMatrixPE": 320, - "ParallelReductionFactorInPlane": 2, - "PixelBandwidth": 150, - "DwellTime": 1.04e-05, - "ImageOrientationPatientDICOM": [ - 0, - 1, - 0, - 0, - 0, - -1 ], - "InPlanePhaseEncodingDirectionDICOM": "ROW", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma_fit", + "InstitutionName": "NU_Tuna", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "Fairbanks_710_Chicago_Chicago_US_60611", + "DeviceSerialNumber": "67034", + "StationName": "MRC35427", + "BodyPartExamined": "BRAIN", + "PatientPosition": "HFS", + "ProcedureStepDescription": "fMRI_STUDIES_DEWALD", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "T1w", + "ProtocolName": "T1w", + "ScanningSequence": "GR_IR", + "SequenceVariant": "SK_SP_MP", + "ScanOptions": "IR", + "SequenceName": "_tfl3d1_16", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS3D", + "DIS2D" + ], + "SeriesNumber": 2, + "AcquisitionTime": "13:55:36.010000", + "AcquisitionNumber": 1, + "SliceThickness": 1, + "SAR": 0.0555161, + "EchoTime": 0.00372, + "RepetitionTime": 2, + "InversionTime": 1, + "FlipAngle": 9, + "PartialFourier": 1, + "BaseResolution": 320, + "ShimSetting": [ + 2639, + 5490, + -7665, + 208, + -44, + -590, + 119, + -158 + ], + "TxRefAmp": 243.668, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC1-7;NC1,2", + "PulseSequenceDetails": "%SiemensSeq%_tfl", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 81.25, + "PhaseEncodingSteps": 259, + "AcquisitionMatrixPE": 260, + "ReconMatrixPE": 320, + "ParallelReductionFactorInPlane": 2, + "PixelBandwidth": 150, + "DwellTime": 1.04e-05, + "ImageOrientationPatientDICOM": [ + 0, + 1, + 0, + 0, + 0, + -1 + ], + "InPlanePhaseEncodingDirectionDICOM": "ROW", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-nwu06/anat/sub-nwu06_space-other_T2star.json b/derivatives/data_preprocessed/sub-nwu06/anat/sub-nwu06_space-other_T2star.json index be965193c6..7ab3ee3b56 100644 --- a/derivatives/data_preprocessed/sub-nwu06/anat/sub-nwu06_space-other_T2star.json +++ b/derivatives/data_preprocessed/sub-nwu06/anat/sub-nwu06_space-other_T2star.json @@ -73,5 +73,9 @@ "InPlanePhaseEncodingDirectionDICOM": "COL", "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0", - "AcquisitionDuration": 285.0 + "AcquisitionDuration": 285.0, + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-nwu06/anat/sub-nwu06_space-other_T2w.json b/derivatives/data_preprocessed/sub-nwu06/anat/sub-nwu06_space-other_T2w.json index 7249841a49..16302be525 100644 --- a/derivatives/data_preprocessed/sub-nwu06/anat/sub-nwu06_space-other_T2w.json +++ b/derivatives/data_preprocessed/sub-nwu06/anat/sub-nwu06_space-other_T2w.json @@ -1,67 +1,80 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma_fit", - "InstitutionName": "NU_Tuna", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "Fairbanks_710_Chicago_Chicago_US_60611", - "DeviceSerialNumber": "67034", - "StationName": "MRC35427", - "BodyPartExamined": "BRAIN", - "PatientPosition": "HFS", - "ProcedureStepDescription": "fMRI_STUDIES_DEWALD", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "T2w", - "ProtocolName": "T2w", - "ScanningSequence": "SE", - "SequenceVariant": "SK_SP_OSP", - "ScanOptions": "PFP", - "SequenceName": "_spcR_100", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS3D", "DIS2D"], - "SeriesNumber": 3, - "AcquisitionTime": "14:00:45.405000", - "AcquisitionNumber": 1, - "SliceThickness": 0.8, - "SAR": 0.500727, - "EchoTime": 0.12, - "RepetitionTime": 1.5, - "FlipAngle": 120, - "PartialFourier": 1, - "BaseResolution": 320, - "ShimSetting": [ - 2639, - 5490, - -7665, - 208, - -44, - -590, - 119, - -158 ], - "TxRefAmp": 260.938, - "PhaseResolution": 1, - "PhaseOversampling": 0.8, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC5-7;NC1,2", - "PulseSequenceDetails": "%SiemensSeq%_tse_vfl", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 100, - "EchoTrainLength": 76, - "PhaseEncodingSteps": 422, - "AcquisitionMatrixPE": 320, - "ReconMatrixPE": 320, - "ParallelReductionFactorInPlane": 3, - "PixelBandwidth": 625, - "DwellTime": 2.5e-06, - "ImageOrientationPatientDICOM": [ - -6e-14, - 1, - 4.896e-12, - 0.012217, - 4.897e-12, - -0.999925 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma_fit", + "InstitutionName": "NU_Tuna", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "Fairbanks_710_Chicago_Chicago_US_60611", + "DeviceSerialNumber": "67034", + "StationName": "MRC35427", + "BodyPartExamined": "BRAIN", + "PatientPosition": "HFS", + "ProcedureStepDescription": "fMRI_STUDIES_DEWALD", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "T2w", + "ProtocolName": "T2w", + "ScanningSequence": "SE", + "SequenceVariant": "SK_SP_OSP", + "ScanOptions": "PFP", + "SequenceName": "_spcR_100", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS3D", + "DIS2D" + ], + "SeriesNumber": 3, + "AcquisitionTime": "14:00:45.405000", + "AcquisitionNumber": 1, + "SliceThickness": 0.8, + "SAR": 0.500727, + "EchoTime": 0.12, + "RepetitionTime": 1.5, + "FlipAngle": 120, + "PartialFourier": 1, + "BaseResolution": 320, + "ShimSetting": [ + 2639, + 5490, + -7665, + 208, + -44, + -590, + 119, + -158 + ], + "TxRefAmp": 260.938, + "PhaseResolution": 1, + "PhaseOversampling": 0.8, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC5-7;NC1,2", + "PulseSequenceDetails": "%SiemensSeq%_tse_vfl", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "EchoTrainLength": 76, + "PhaseEncodingSteps": 422, + "AcquisitionMatrixPE": 320, + "ReconMatrixPE": 320, + "ParallelReductionFactorInPlane": 3, + "PixelBandwidth": 625, + "DwellTime": 2.5e-06, + "ImageOrientationPatientDICOM": [ + -6e-14, + 1, + 4.896e-12, + 0.012217, + 4.897e-12, + -0.999925 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-oxfordFmrib01/anat/sub-oxfordFmrib01_flip-1_mt-on_space-other_MTS.json b/derivatives/data_preprocessed/sub-oxfordFmrib01/anat/sub-oxfordFmrib01_flip-1_mt-on_space-other_MTS.json index aeb34f9028..efa683dbb6 100644 --- a/derivatives/data_preprocessed/sub-oxfordFmrib01/anat/sub-oxfordFmrib01_flip-1_mt-on_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-oxfordFmrib01/anat/sub-oxfordFmrib01_flip-1_mt-on_space-other_MTS.json @@ -1,65 +1,75 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.227, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma", - "InstitutionName": "The_John_Radcliffe", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "Headley_Way_StreetNo_Oxford_District_GB_OX3_9DU", - "DeviceSerialNumber": "66050", - "StationName": "AWP66050", - "BodyPartExamined": "CSPINE", - "PatientPosition": "HFS", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-MT1", - "ProtocolName": "GRE-MT1", - "ScanningSequence": "GR", - "SequenceVariant": "MTC_SP", - "ScanOptions": "MT", - "SequenceName": "_fl3d1", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "DIS2D"], - "SeriesNumber": 12, - "AcquisitionTime": "15:35:51.947500", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SAR": 0.481144, - "EchoTime": 0.00313, - "RepetitionTime": 0.035, - "FlipAngle": 9, - "PartialFourier": 1, - "BaseResolution": 256, - "ShimSetting": [ - 300, - -11383, - 1203, - -2066, - 368, - 2052, - -676, - -71 ], - "TxRefAmp": 269.398, - "PhaseResolution": 1, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC7;NC1,2", - "CoilString": "HC7;NC1_2", - "PulseSequenceDetails": "%SiemensSeq%_gre", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 100, - "PhaseEncodingSteps": 255, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 256, - "PixelBandwidth": 260, - "DwellTime": 7.5e-06, - "ImageOrientationPatientDICOM": [ - 1, - 0, - 0, - 0, - 0.99945, - 0.0331552 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 123.227, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma", + "InstitutionName": "The_John_Radcliffe", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "Headley_Way_StreetNo_Oxford_District_GB_OX3_9DU", + "DeviceSerialNumber": "66050", + "StationName": "AWP66050", + "BodyPartExamined": "CSPINE", + "PatientPosition": "HFS", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-MT1", + "ProtocolName": "GRE-MT1", + "ScanningSequence": "GR", + "SequenceVariant": "MTC_SP", + "ScanOptions": "MT", + "SequenceName": "_fl3d1", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "DIS2D" + ], + "SeriesNumber": 12, + "AcquisitionTime": "15:35:51.947500", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SAR": 0.481144, + "EchoTime": 0.00313, + "RepetitionTime": 0.035, + "FlipAngle": 9, + "PartialFourier": 1, + "BaseResolution": 256, + "ShimSetting": [ + 300, + -11383, + 1203, + -2066, + 368, + 2052, + -676, + -71 + ], + "TxRefAmp": 269.398, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC7;NC1,2", + "CoilString": "HC7;NC1_2", + "PulseSequenceDetails": "%SiemensSeq%_gre", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 255, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "PixelBandwidth": 260, + "DwellTime": 7.5e-06, + "ImageOrientationPatientDICOM": [ + 1, + 0, + 0, + 0, + 0.99945, + 0.0331552 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-oxfordFmrib01/anat/sub-oxfordFmrib01_flip-2_mt-off_space-other_MTS.json b/derivatives/data_preprocessed/sub-oxfordFmrib01/anat/sub-oxfordFmrib01_flip-2_mt-off_space-other_MTS.json index 7333adf06b..e297770760 100644 --- a/derivatives/data_preprocessed/sub-oxfordFmrib01/anat/sub-oxfordFmrib01_flip-2_mt-off_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-oxfordFmrib01/anat/sub-oxfordFmrib01_flip-2_mt-off_space-other_MTS.json @@ -1,64 +1,74 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.227, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma", - "InstitutionName": "The_John_Radcliffe", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "Headley_Way_StreetNo_Oxford_District_GB_OX3_9DU", - "DeviceSerialNumber": "66050", - "StationName": "AWP66050", - "BodyPartExamined": "CSPINE", - "PatientPosition": "HFS", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-T1w", - "ProtocolName": "GRE-T1w", - "ScanningSequence": "GR", - "SequenceVariant": "SP", - "SequenceName": "_fl3d1", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "DIS2D"], - "SeriesNumber": 13, - "AcquisitionTime": "15:38:4.937500", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SAR": 0.0311959, - "EchoTime": 0.00313, - "RepetitionTime": 0.015, - "FlipAngle": 15, - "PartialFourier": 1, - "BaseResolution": 256, - "ShimSetting": [ - 300, - -11383, - 1203, - -2066, - 368, - 2052, - -676, - -71 ], - "TxRefAmp": 269.398, - "PhaseResolution": 1, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC7;NC1,2", - "CoilString": "HC7;NC1_2", - "PulseSequenceDetails": "%SiemensSeq%_gre", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 100, - "PhaseEncodingSteps": 255, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 256, - "PixelBandwidth": 260, - "DwellTime": 7.5e-06, - "ImageOrientationPatientDICOM": [ - 1, - 0, - 0, - 0, - 0.99945, - 0.0331552 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 123.227, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma", + "InstitutionName": "The_John_Radcliffe", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "Headley_Way_StreetNo_Oxford_District_GB_OX3_9DU", + "DeviceSerialNumber": "66050", + "StationName": "AWP66050", + "BodyPartExamined": "CSPINE", + "PatientPosition": "HFS", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-T1w", + "ProtocolName": "GRE-T1w", + "ScanningSequence": "GR", + "SequenceVariant": "SP", + "SequenceName": "_fl3d1", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "DIS2D" + ], + "SeriesNumber": 13, + "AcquisitionTime": "15:38:4.937500", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SAR": 0.0311959, + "EchoTime": 0.00313, + "RepetitionTime": 0.015, + "FlipAngle": 15, + "PartialFourier": 1, + "BaseResolution": 256, + "ShimSetting": [ + 300, + -11383, + 1203, + -2066, + 368, + 2052, + -676, + -71 + ], + "TxRefAmp": 269.398, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC7;NC1,2", + "CoilString": "HC7;NC1_2", + "PulseSequenceDetails": "%SiemensSeq%_gre", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 255, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "PixelBandwidth": 260, + "DwellTime": 7.5e-06, + "ImageOrientationPatientDICOM": [ + 1, + 0, + 0, + 0, + 0.99945, + 0.0331552 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-oxfordFmrib01/anat/sub-oxfordFmrib01_space-other_T1w.json b/derivatives/data_preprocessed/sub-oxfordFmrib01/anat/sub-oxfordFmrib01_space-other_T1w.json index 1827f417d8..7622626dd5 100644 --- a/derivatives/data_preprocessed/sub-oxfordFmrib01/anat/sub-oxfordFmrib01_space-other_T1w.json +++ b/derivatives/data_preprocessed/sub-oxfordFmrib01/anat/sub-oxfordFmrib01_space-other_T1w.json @@ -1,66 +1,79 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.227, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma", - "InstitutionName": "The_John_Radcliffe", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "Headley_Way_StreetNo_Oxford_District_GB_OX3_9DU", - "DeviceSerialNumber": "66050", - "StationName": "AWP66050", - "BodyPartExamined": "CSPINE", - "PatientPosition": "HFS", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "T1w", - "ProtocolName": "T1w", - "ScanningSequence": "GR_IR", - "SequenceVariant": "SK_SP_MP", - "ScanOptions": "IR", - "SequenceName": "_tfl3d1_16", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS3D", "DIS2D"], - "SeriesNumber": 4, - "AcquisitionTime": "15:07:57.047500", - "AcquisitionNumber": 1, - "SliceThickness": 1, - "SAR": 0.0551066, - "EchoTime": 0.00372, - "RepetitionTime": 2, - "InversionTime": 1, - "FlipAngle": 9, - "PartialFourier": 1, - "BaseResolution": 320, - "ShimSetting": [ - 329, - -11489, - 1437, - -30, - 234, - 212, - 86, - -1 ], - "TxRefAmp": 253.612, - "PhaseResolution": 1, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC1-7;NC1,2", - "CoilString": "HC1-7;NC1_2", - "PulseSequenceDetails": "%SiemensSeq%_tfl", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 81.25, - "PhaseEncodingSteps": 259, - "AcquisitionMatrixPE": 260, - "ReconMatrixPE": 320, - "PixelBandwidth": 150, - "DwellTime": 1.04e-05, - "ImageOrientationPatientDICOM": [ - 0, - 1, - 0, - 0, - 0, - -1 ], - "InPlanePhaseEncodingDirectionDICOM": "ROW", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 123.227, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma", + "InstitutionName": "The_John_Radcliffe", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "Headley_Way_StreetNo_Oxford_District_GB_OX3_9DU", + "DeviceSerialNumber": "66050", + "StationName": "AWP66050", + "BodyPartExamined": "CSPINE", + "PatientPosition": "HFS", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "T1w", + "ProtocolName": "T1w", + "ScanningSequence": "GR_IR", + "SequenceVariant": "SK_SP_MP", + "ScanOptions": "IR", + "SequenceName": "_tfl3d1_16", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS3D", + "DIS2D" + ], + "SeriesNumber": 4, + "AcquisitionTime": "15:07:57.047500", + "AcquisitionNumber": 1, + "SliceThickness": 1, + "SAR": 0.0551066, + "EchoTime": 0.00372, + "RepetitionTime": 2, + "InversionTime": 1, + "FlipAngle": 9, + "PartialFourier": 1, + "BaseResolution": 320, + "ShimSetting": [ + 329, + -11489, + 1437, + -30, + 234, + 212, + 86, + -1 + ], + "TxRefAmp": 253.612, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC1-7;NC1,2", + "CoilString": "HC1-7;NC1_2", + "PulseSequenceDetails": "%SiemensSeq%_tfl", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 81.25, + "PhaseEncodingSteps": 259, + "AcquisitionMatrixPE": 260, + "ReconMatrixPE": 320, + "PixelBandwidth": 150, + "DwellTime": 1.04e-05, + "ImageOrientationPatientDICOM": [ + 0, + 1, + 0, + 0, + 0, + -1 + ], + "InPlanePhaseEncodingDirectionDICOM": "ROW", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-oxfordFmrib01/anat/sub-oxfordFmrib01_space-other_T2star.json b/derivatives/data_preprocessed/sub-oxfordFmrib01/anat/sub-oxfordFmrib01_space-other_T2star.json index 77c15b9b7d..9c383a2115 100644 --- a/derivatives/data_preprocessed/sub-oxfordFmrib01/anat/sub-oxfordFmrib01_space-other_T2star.json +++ b/derivatives/data_preprocessed/sub-oxfordFmrib01/anat/sub-oxfordFmrib01_space-other_T2star.json @@ -74,5 +74,9 @@ "InPlanePhaseEncodingDirectionDICOM": "COL", "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0", - "AcquisitionDuration": 285.0 + "AcquisitionDuration": 285.0, + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-oxfordFmrib01/anat/sub-oxfordFmrib01_space-other_T2w.json b/derivatives/data_preprocessed/sub-oxfordFmrib01/anat/sub-oxfordFmrib01_space-other_T2w.json index a02c4f791f..e0df4f2698 100644 --- a/derivatives/data_preprocessed/sub-oxfordFmrib01/anat/sub-oxfordFmrib01_space-other_T2w.json +++ b/derivatives/data_preprocessed/sub-oxfordFmrib01/anat/sub-oxfordFmrib01_space-other_T2w.json @@ -1,67 +1,80 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.227, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma", - "InstitutionName": "The_John_Radcliffe", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "Headley_Way_StreetNo_Oxford_District_GB_OX3_9DU", - "DeviceSerialNumber": "66050", - "StationName": "AWP66050", - "BodyPartExamined": "CSPINE", - "PatientPosition": "HFS", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "T2w", - "ProtocolName": "T2w", - "ScanningSequence": "SE", - "SequenceVariant": "SK_SP_OSP", - "ScanOptions": "PFP", - "SequenceName": "_spcR_100", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS3D", "DIS2D"], - "SeriesNumber": 5, - "AcquisitionTime": "15:12:59.035000", - "AcquisitionNumber": 1, - "SliceThickness": 0.8, - "SAR": 0.486467, - "EchoTime": 0.12, - "RepetitionTime": 1.5, - "FlipAngle": 120, - "PartialFourier": 1, - "BaseResolution": 320, - "ShimSetting": [ - 329, - -11489, - 1437, - -30, - 234, - 212, - 86, - -1 ], - "TxRefAmp": 269.398, - "PhaseResolution": 1, - "PhaseOversampling": 0.8, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC5-7;NC1,2", - "CoilString": "HC5-7;NC1_2", - "PulseSequenceDetails": "%SiemensSeq%_tse_vfl", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 100, - "EchoTrainLength": 76, - "PhaseEncodingSteps": 422, - "AcquisitionMatrixPE": 320, - "ReconMatrixPE": 320, - "PixelBandwidth": 625, - "DwellTime": 2.5e-06, - "ImageOrientationPatientDICOM": [ - 0, - 1, - 4.897e-12, - 0, - 4.897e-12, - -1 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 123.227, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma", + "InstitutionName": "The_John_Radcliffe", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "Headley_Way_StreetNo_Oxford_District_GB_OX3_9DU", + "DeviceSerialNumber": "66050", + "StationName": "AWP66050", + "BodyPartExamined": "CSPINE", + "PatientPosition": "HFS", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "T2w", + "ProtocolName": "T2w", + "ScanningSequence": "SE", + "SequenceVariant": "SK_SP_OSP", + "ScanOptions": "PFP", + "SequenceName": "_spcR_100", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS3D", + "DIS2D" + ], + "SeriesNumber": 5, + "AcquisitionTime": "15:12:59.035000", + "AcquisitionNumber": 1, + "SliceThickness": 0.8, + "SAR": 0.486467, + "EchoTime": 0.12, + "RepetitionTime": 1.5, + "FlipAngle": 120, + "PartialFourier": 1, + "BaseResolution": 320, + "ShimSetting": [ + 329, + -11489, + 1437, + -30, + 234, + 212, + 86, + -1 + ], + "TxRefAmp": 269.398, + "PhaseResolution": 1, + "PhaseOversampling": 0.8, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC5-7;NC1,2", + "CoilString": "HC5-7;NC1_2", + "PulseSequenceDetails": "%SiemensSeq%_tse_vfl", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "EchoTrainLength": 76, + "PhaseEncodingSteps": 422, + "AcquisitionMatrixPE": 320, + "ReconMatrixPE": 320, + "PixelBandwidth": 625, + "DwellTime": 2.5e-06, + "ImageOrientationPatientDICOM": [ + 0, + 1, + 4.897e-12, + 0, + 4.897e-12, + -1 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-oxfordFmrib02/anat/sub-oxfordFmrib02_flip-1_mt-on_space-other_MTS.json b/derivatives/data_preprocessed/sub-oxfordFmrib02/anat/sub-oxfordFmrib02_flip-1_mt-on_space-other_MTS.json index 5849657af7..a4b2308636 100644 --- a/derivatives/data_preprocessed/sub-oxfordFmrib02/anat/sub-oxfordFmrib02_flip-1_mt-on_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-oxfordFmrib02/anat/sub-oxfordFmrib02_flip-1_mt-on_space-other_MTS.json @@ -1,65 +1,75 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.227, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma", - "InstitutionName": "The_John_Radcliffe", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "Headley_Way_StreetNo_Oxford_District_GB_OX3_9DU", - "DeviceSerialNumber": "66050", - "StationName": "AWP66050", - "BodyPartExamined": "CSPINE", - "PatientPosition": "HFS", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-MT1", - "ProtocolName": "GRE-MT1", - "ScanningSequence": "GR", - "SequenceVariant": "MTC_SP", - "ScanOptions": "MT", - "SequenceName": "_fl3d1", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "DIS2D"], - "SeriesNumber": 6, - "AcquisitionTime": "17:00:15.002500", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SAR": 0.455501, - "EchoTime": 0.00313, - "RepetitionTime": 0.035, - "FlipAngle": 9, - "PartialFourier": 1, - "BaseResolution": 256, - "ShimSetting": [ - 321, - -11684, - 1449, - -1706, - 240, - 1710, - -96, - 142 ], - "TxRefAmp": 278.716, - "PhaseResolution": 1, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC7;NC1,2", - "CoilString": "HC7;NC1_2", - "PulseSequenceDetails": "%SiemensSeq%_gre", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 100, - "PhaseEncodingSteps": 255, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 256, - "PixelBandwidth": 260, - "DwellTime": 7.5e-06, - "ImageOrientationPatientDICOM": [ - 1, - 0, - 0, - 0, - 1, - 0 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 123.227, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma", + "InstitutionName": "The_John_Radcliffe", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "Headley_Way_StreetNo_Oxford_District_GB_OX3_9DU", + "DeviceSerialNumber": "66050", + "StationName": "AWP66050", + "BodyPartExamined": "CSPINE", + "PatientPosition": "HFS", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-MT1", + "ProtocolName": "GRE-MT1", + "ScanningSequence": "GR", + "SequenceVariant": "MTC_SP", + "ScanOptions": "MT", + "SequenceName": "_fl3d1", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "DIS2D" + ], + "SeriesNumber": 6, + "AcquisitionTime": "17:00:15.002500", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SAR": 0.455501, + "EchoTime": 0.00313, + "RepetitionTime": 0.035, + "FlipAngle": 9, + "PartialFourier": 1, + "BaseResolution": 256, + "ShimSetting": [ + 321, + -11684, + 1449, + -1706, + 240, + 1710, + -96, + 142 + ], + "TxRefAmp": 278.716, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC7;NC1,2", + "CoilString": "HC7;NC1_2", + "PulseSequenceDetails": "%SiemensSeq%_gre", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 255, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "PixelBandwidth": 260, + "DwellTime": 7.5e-06, + "ImageOrientationPatientDICOM": [ + 1, + 0, + 0, + 0, + 1, + 0 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-oxfordFmrib02/anat/sub-oxfordFmrib02_flip-2_mt-off_space-other_MTS.json b/derivatives/data_preprocessed/sub-oxfordFmrib02/anat/sub-oxfordFmrib02_flip-2_mt-off_space-other_MTS.json index 1c54cb527a..17e2a2934e 100644 --- a/derivatives/data_preprocessed/sub-oxfordFmrib02/anat/sub-oxfordFmrib02_flip-2_mt-off_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-oxfordFmrib02/anat/sub-oxfordFmrib02_flip-2_mt-off_space-other_MTS.json @@ -1,64 +1,74 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.227, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma", - "InstitutionName": "The_John_Radcliffe", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "Headley_Way_StreetNo_Oxford_District_GB_OX3_9DU", - "DeviceSerialNumber": "66050", - "StationName": "AWP66050", - "BodyPartExamined": "CSPINE", - "PatientPosition": "HFS", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-T1w", - "ProtocolName": "GRE-T1w", - "ScanningSequence": "GR", - "SequenceVariant": "SP", - "SequenceName": "_fl3d1", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "DIS2D"], - "SeriesNumber": 8, - "AcquisitionTime": "17:04:40.992500", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SAR": 0.0295333, - "EchoTime": 0.00313, - "RepetitionTime": 0.015, - "FlipAngle": 15, - "PartialFourier": 1, - "BaseResolution": 256, - "ShimSetting": [ - 321, - -11684, - 1449, - -1706, - 240, - 1710, - -96, - 142 ], - "TxRefAmp": 278.716, - "PhaseResolution": 1, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC7;NC1,2", - "CoilString": "HC7;NC1_2", - "PulseSequenceDetails": "%SiemensSeq%_gre", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 100, - "PhaseEncodingSteps": 255, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 256, - "PixelBandwidth": 260, - "DwellTime": 7.5e-06, - "ImageOrientationPatientDICOM": [ - 1, - 0, - 0, - 0, - 1, - 0 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 123.227, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma", + "InstitutionName": "The_John_Radcliffe", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "Headley_Way_StreetNo_Oxford_District_GB_OX3_9DU", + "DeviceSerialNumber": "66050", + "StationName": "AWP66050", + "BodyPartExamined": "CSPINE", + "PatientPosition": "HFS", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-T1w", + "ProtocolName": "GRE-T1w", + "ScanningSequence": "GR", + "SequenceVariant": "SP", + "SequenceName": "_fl3d1", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "DIS2D" + ], + "SeriesNumber": 8, + "AcquisitionTime": "17:04:40.992500", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SAR": 0.0295333, + "EchoTime": 0.00313, + "RepetitionTime": 0.015, + "FlipAngle": 15, + "PartialFourier": 1, + "BaseResolution": 256, + "ShimSetting": [ + 321, + -11684, + 1449, + -1706, + 240, + 1710, + -96, + 142 + ], + "TxRefAmp": 278.716, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC7;NC1,2", + "CoilString": "HC7;NC1_2", + "PulseSequenceDetails": "%SiemensSeq%_gre", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 255, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "PixelBandwidth": 260, + "DwellTime": 7.5e-06, + "ImageOrientationPatientDICOM": [ + 1, + 0, + 0, + 0, + 1, + 0 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-oxfordFmrib02/anat/sub-oxfordFmrib02_space-other_T1w.json b/derivatives/data_preprocessed/sub-oxfordFmrib02/anat/sub-oxfordFmrib02_space-other_T1w.json index eef83e1ab4..3b0860b52b 100644 --- a/derivatives/data_preprocessed/sub-oxfordFmrib02/anat/sub-oxfordFmrib02_space-other_T1w.json +++ b/derivatives/data_preprocessed/sub-oxfordFmrib02/anat/sub-oxfordFmrib02_space-other_T1w.json @@ -1,66 +1,79 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.227, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma", - "InstitutionName": "The_John_Radcliffe", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "Headley_Way_StreetNo_Oxford_District_GB_OX3_9DU", - "DeviceSerialNumber": "66050", - "StationName": "AWP66050", - "BodyPartExamined": "CSPINE", - "PatientPosition": "HFS", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "T1w", - "ProtocolName": "T1w", - "ScanningSequence": "GR_IR", - "SequenceVariant": "SK_SP_MP", - "ScanOptions": "IR", - "SequenceName": "_tfl3d1_16", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS3D", "DIS2D"], - "SeriesNumber": 3, - "AcquisitionTime": "16:45:59.002500", - "AcquisitionNumber": 1, - "SliceThickness": 1, - "SAR": 0.051371, - "EchoTime": 0.00372, - "RepetitionTime": 2, - "InversionTime": 1, - "FlipAngle": 9, - "PartialFourier": 1, - "BaseResolution": 320, - "ShimSetting": [ - 329, - -11489, - 1437, - -30, - 234, - 212, - 86, - -1 ], - "TxRefAmp": 260.794, - "PhaseResolution": 1, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC1-7;NC1,2", - "CoilString": "HC1-7;NC1_2", - "PulseSequenceDetails": "%SiemensSeq%_tfl", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 81.25, - "PhaseEncodingSteps": 259, - "AcquisitionMatrixPE": 260, - "ReconMatrixPE": 320, - "PixelBandwidth": 150, - "DwellTime": 1.04e-05, - "ImageOrientationPatientDICOM": [ - 0, - 1, - 0, - 0, - 0, - -1 ], - "InPlanePhaseEncodingDirectionDICOM": "ROW", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 123.227, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma", + "InstitutionName": "The_John_Radcliffe", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "Headley_Way_StreetNo_Oxford_District_GB_OX3_9DU", + "DeviceSerialNumber": "66050", + "StationName": "AWP66050", + "BodyPartExamined": "CSPINE", + "PatientPosition": "HFS", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "T1w", + "ProtocolName": "T1w", + "ScanningSequence": "GR_IR", + "SequenceVariant": "SK_SP_MP", + "ScanOptions": "IR", + "SequenceName": "_tfl3d1_16", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS3D", + "DIS2D" + ], + "SeriesNumber": 3, + "AcquisitionTime": "16:45:59.002500", + "AcquisitionNumber": 1, + "SliceThickness": 1, + "SAR": 0.051371, + "EchoTime": 0.00372, + "RepetitionTime": 2, + "InversionTime": 1, + "FlipAngle": 9, + "PartialFourier": 1, + "BaseResolution": 320, + "ShimSetting": [ + 329, + -11489, + 1437, + -30, + 234, + 212, + 86, + -1 + ], + "TxRefAmp": 260.794, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC1-7;NC1,2", + "CoilString": "HC1-7;NC1_2", + "PulseSequenceDetails": "%SiemensSeq%_tfl", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 81.25, + "PhaseEncodingSteps": 259, + "AcquisitionMatrixPE": 260, + "ReconMatrixPE": 320, + "PixelBandwidth": 150, + "DwellTime": 1.04e-05, + "ImageOrientationPatientDICOM": [ + 0, + 1, + 0, + 0, + 0, + -1 + ], + "InPlanePhaseEncodingDirectionDICOM": "ROW", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-oxfordFmrib02/anat/sub-oxfordFmrib02_space-other_T2star.json b/derivatives/data_preprocessed/sub-oxfordFmrib02/anat/sub-oxfordFmrib02_space-other_T2star.json index f16c161921..d003806d89 100644 --- a/derivatives/data_preprocessed/sub-oxfordFmrib02/anat/sub-oxfordFmrib02_space-other_T2star.json +++ b/derivatives/data_preprocessed/sub-oxfordFmrib02/anat/sub-oxfordFmrib02_space-other_T2star.json @@ -74,5 +74,9 @@ "InPlanePhaseEncodingDirectionDICOM": "COL", "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0", - "AcquisitionDuration": 285.0 + "AcquisitionDuration": 285.0, + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-oxfordFmrib02/anat/sub-oxfordFmrib02_space-other_T2w.json b/derivatives/data_preprocessed/sub-oxfordFmrib02/anat/sub-oxfordFmrib02_space-other_T2w.json index 8e2595fd1e..4443c5279e 100644 --- a/derivatives/data_preprocessed/sub-oxfordFmrib02/anat/sub-oxfordFmrib02_space-other_T2w.json +++ b/derivatives/data_preprocessed/sub-oxfordFmrib02/anat/sub-oxfordFmrib02_space-other_T2w.json @@ -1,67 +1,80 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.227, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma", - "InstitutionName": "The_John_Radcliffe", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "Headley_Way_StreetNo_Oxford_District_GB_OX3_9DU", - "DeviceSerialNumber": "66050", - "StationName": "AWP66050", - "BodyPartExamined": "CSPINE", - "PatientPosition": "HFS", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "T2w", - "ProtocolName": "T2w", - "ScanningSequence": "SE", - "SequenceVariant": "SK_SP_OSP", - "ScanOptions": "PFP", - "SequenceName": "_spcR_100", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS3D", "DIS2D"], - "SeriesNumber": 4, - "AcquisitionTime": "16:51:17.007500", - "AcquisitionNumber": 1, - "SliceThickness": 0.8, - "SAR": 0.460541, - "EchoTime": 0.12, - "RepetitionTime": 1.5, - "FlipAngle": 120, - "PartialFourier": 1, - "BaseResolution": 320, - "ShimSetting": [ - 329, - -11489, - 1437, - -30, - 234, - 212, - 86, - -1 ], - "TxRefAmp": 278.716, - "PhaseResolution": 1, - "PhaseOversampling": 0.8, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC5-7;NC1,2", - "CoilString": "HC5-7;NC1_2", - "PulseSequenceDetails": "%SiemensSeq%_tse_vfl", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 100, - "EchoTrainLength": 76, - "PhaseEncodingSteps": 422, - "AcquisitionMatrixPE": 320, - "ReconMatrixPE": 320, - "PixelBandwidth": 625, - "DwellTime": 2.5e-06, - "ImageOrientationPatientDICOM": [ - 0, - 1, - 4.897e-12, - 0, - 4.897e-12, - -1 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 123.227, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma", + "InstitutionName": "The_John_Radcliffe", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "Headley_Way_StreetNo_Oxford_District_GB_OX3_9DU", + "DeviceSerialNumber": "66050", + "StationName": "AWP66050", + "BodyPartExamined": "CSPINE", + "PatientPosition": "HFS", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "T2w", + "ProtocolName": "T2w", + "ScanningSequence": "SE", + "SequenceVariant": "SK_SP_OSP", + "ScanOptions": "PFP", + "SequenceName": "_spcR_100", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS3D", + "DIS2D" + ], + "SeriesNumber": 4, + "AcquisitionTime": "16:51:17.007500", + "AcquisitionNumber": 1, + 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"Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-oxfordFmrib03/anat/sub-oxfordFmrib03_flip-1_mt-on_space-other_MTS.json b/derivatives/data_preprocessed/sub-oxfordFmrib03/anat/sub-oxfordFmrib03_flip-1_mt-on_space-other_MTS.json index 5062dec891..12d8f5515c 100644 --- a/derivatives/data_preprocessed/sub-oxfordFmrib03/anat/sub-oxfordFmrib03_flip-1_mt-on_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-oxfordFmrib03/anat/sub-oxfordFmrib03_flip-1_mt-on_space-other_MTS.json @@ -1,65 +1,75 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.227, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma", - "InstitutionName": "The_John_Radcliffe", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "Headley_Way_StreetNo_Oxford_District_GB_OX3_9DU", - "DeviceSerialNumber": "66050", - "StationName": "AWP66050", - "BodyPartExamined": "CSPINE", - "PatientPosition": "HFS", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-MT1", - "ProtocolName": "GRE-MT1", - "ScanningSequence": "GR", - "SequenceVariant": "MTC_SP", - "ScanOptions": "MT", - "SequenceName": "_fl3d1", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "DIS2D"], - "SeriesNumber": 5, - "AcquisitionTime": "15:21:22.977500", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SAR": 0.514633, - "EchoTime": 0.00313, - "RepetitionTime": 0.035, - "FlipAngle": 9, - "PartialFourier": 1, - "BaseResolution": 256, - "ShimSetting": [ - 328, - -11627, - 1407, - -2335, - 365, - 1269, - -314, - 58 ], - "TxRefAmp": 272.469, - "PhaseResolution": 1, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC7;NC1,2", - "CoilString": "HC7;NC1_2", - "PulseSequenceDetails": "%SiemensSeq%_gre", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 100, - "PhaseEncodingSteps": 255, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 256, - "PixelBandwidth": 260, - "DwellTime": 7.5e-06, - "ImageOrientationPatientDICOM": [ - 1, - 0, - 0, - 0, - 0.984808, - -0.173648 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 123.227, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma", + "InstitutionName": "The_John_Radcliffe", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "Headley_Way_StreetNo_Oxford_District_GB_OX3_9DU", + "DeviceSerialNumber": "66050", + "StationName": "AWP66050", + "BodyPartExamined": "CSPINE", + "PatientPosition": "HFS", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-MT1", + "ProtocolName": "GRE-MT1", + "ScanningSequence": "GR", + "SequenceVariant": "MTC_SP", + "ScanOptions": "MT", + "SequenceName": "_fl3d1", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "DIS2D" + ], + "SeriesNumber": 5, + "AcquisitionTime": "15:21:22.977500", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SAR": 0.514633, + "EchoTime": 0.00313, + "RepetitionTime": 0.035, + "FlipAngle": 9, + "PartialFourier": 1, + "BaseResolution": 256, + "ShimSetting": [ + 328, + -11627, + 1407, + -2335, + 365, + 1269, + -314, + 58 + ], + "TxRefAmp": 272.469, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC7;NC1,2", + "CoilString": "HC7;NC1_2", + "PulseSequenceDetails": "%SiemensSeq%_gre", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 255, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "PixelBandwidth": 260, + "DwellTime": 7.5e-06, + "ImageOrientationPatientDICOM": [ + 1, + 0, + 0, + 0, + 0.984808, + -0.173648 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-oxfordFmrib03/anat/sub-oxfordFmrib03_flip-2_mt-off_space-other_MTS.json b/derivatives/data_preprocessed/sub-oxfordFmrib03/anat/sub-oxfordFmrib03_flip-2_mt-off_space-other_MTS.json index 0fce729900..efaf156880 100644 --- a/derivatives/data_preprocessed/sub-oxfordFmrib03/anat/sub-oxfordFmrib03_flip-2_mt-off_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-oxfordFmrib03/anat/sub-oxfordFmrib03_flip-2_mt-off_space-other_MTS.json @@ -1,64 +1,74 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.227, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma", - "InstitutionName": "The_John_Radcliffe", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "Headley_Way_StreetNo_Oxford_District_GB_OX3_9DU", - "DeviceSerialNumber": "66050", - "StationName": "AWP66050", - "BodyPartExamined": "CSPINE", - "PatientPosition": "HFS", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-T1w", - "ProtocolName": "GRE-T1w", - "ScanningSequence": "GR", - "SequenceVariant": "SP", - "SequenceName": "_fl3d1", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "DIS2D"], - "SeriesNumber": 7, - "AcquisitionTime": "15:25:55.962500", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SAR": 0.0333672, - "EchoTime": 0.00313, - "RepetitionTime": 0.015, - "FlipAngle": 15, - "PartialFourier": 1, - "BaseResolution": 256, - "ShimSetting": [ - 328, - -11627, - 1407, - -2335, - 365, - 1269, - -314, - 58 ], - "TxRefAmp": 272.469, - "PhaseResolution": 1, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC7;NC1,2", - "CoilString": "HC7;NC1_2", - "PulseSequenceDetails": "%SiemensSeq%_gre", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 100, - "PhaseEncodingSteps": 255, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 256, - "PixelBandwidth": 260, - "DwellTime": 7.5e-06, - "ImageOrientationPatientDICOM": [ - 1, - 0, - 0, - 0, - 0.984808, - -0.173648 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 123.227, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma", + "InstitutionName": "The_John_Radcliffe", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "Headley_Way_StreetNo_Oxford_District_GB_OX3_9DU", + "DeviceSerialNumber": "66050", + "StationName": "AWP66050", + "BodyPartExamined": "CSPINE", + "PatientPosition": "HFS", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-T1w", + "ProtocolName": "GRE-T1w", + "ScanningSequence": "GR", + "SequenceVariant": "SP", + "SequenceName": "_fl3d1", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "DIS2D" + ], + "SeriesNumber": 7, + "AcquisitionTime": "15:25:55.962500", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SAR": 0.0333672, + "EchoTime": 0.00313, + "RepetitionTime": 0.015, + "FlipAngle": 15, + "PartialFourier": 1, + "BaseResolution": 256, + "ShimSetting": [ + 328, + -11627, + 1407, + -2335, + 365, + 1269, + -314, + 58 + ], + "TxRefAmp": 272.469, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC7;NC1,2", + "CoilString": "HC7;NC1_2", + "PulseSequenceDetails": "%SiemensSeq%_gre", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 255, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "PixelBandwidth": 260, + "DwellTime": 7.5e-06, + "ImageOrientationPatientDICOM": [ + 1, + 0, + 0, + 0, + 0.984808, + -0.173648 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-oxfordFmrib03/anat/sub-oxfordFmrib03_space-other_T1w.json b/derivatives/data_preprocessed/sub-oxfordFmrib03/anat/sub-oxfordFmrib03_space-other_T1w.json index f48510cb7e..8e8371f7bd 100644 --- a/derivatives/data_preprocessed/sub-oxfordFmrib03/anat/sub-oxfordFmrib03_space-other_T1w.json +++ b/derivatives/data_preprocessed/sub-oxfordFmrib03/anat/sub-oxfordFmrib03_space-other_T1w.json @@ -1,66 +1,79 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.227, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma", - "InstitutionName": "The_John_Radcliffe", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "Headley_Way_StreetNo_Oxford_District_GB_OX3_9DU", - "DeviceSerialNumber": "66050", - "StationName": "AWP66050", - "BodyPartExamined": "CSPINE", - "PatientPosition": "HFS", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "T1w", - "ProtocolName": "T1w", - "ScanningSequence": "GR_IR", - "SequenceVariant": "SK_SP_MP", - "ScanOptions": "IR", - "SequenceName": "_tfl3d1_16", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS3D", "DIS2D"], - "SeriesNumber": 2, - "AcquisitionTime": "15:06:38.055000", - "AcquisitionNumber": 1, - "SliceThickness": 1, - "SAR": 0.0589441, - "EchoTime": 0.00372, - "RepetitionTime": 2, - "InversionTime": 1, - "FlipAngle": 9, - "PartialFourier": 1, - "BaseResolution": 320, - "ShimSetting": [ - 329, - -11489, - 1437, - -30, - 234, - 212, - 86, - -1 ], - "TxRefAmp": 257.831, - "PhaseResolution": 1, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC3-7;NC1,2", - "CoilString": "HC3-7;NC1_2", - "PulseSequenceDetails": "%SiemensSeq%_tfl", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 81.25, - "PhaseEncodingSteps": 259, - "AcquisitionMatrixPE": 260, - "ReconMatrixPE": 320, - "PixelBandwidth": 150, - "DwellTime": 1.04e-05, - "ImageOrientationPatientDICOM": [ - 0, - 1, - 0, - 0, - 0, - -1 ], - "InPlanePhaseEncodingDirectionDICOM": "ROW", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 123.227, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma", + "InstitutionName": "The_John_Radcliffe", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "Headley_Way_StreetNo_Oxford_District_GB_OX3_9DU", + "DeviceSerialNumber": "66050", + "StationName": "AWP66050", + "BodyPartExamined": "CSPINE", + "PatientPosition": "HFS", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "T1w", + "ProtocolName": "T1w", + "ScanningSequence": "GR_IR", + "SequenceVariant": "SK_SP_MP", + "ScanOptions": "IR", + "SequenceName": "_tfl3d1_16", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS3D", + "DIS2D" + ], + "SeriesNumber": 2, + "AcquisitionTime": "15:06:38.055000", + "AcquisitionNumber": 1, + "SliceThickness": 1, + "SAR": 0.0589441, + "EchoTime": 0.00372, + "RepetitionTime": 2, + "InversionTime": 1, + "FlipAngle": 9, + "PartialFourier": 1, + "BaseResolution": 320, + "ShimSetting": [ + 329, + -11489, + 1437, + -30, + 234, + 212, + 86, + -1 + ], + "TxRefAmp": 257.831, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC3-7;NC1,2", + "CoilString": "HC3-7;NC1_2", + "PulseSequenceDetails": "%SiemensSeq%_tfl", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 81.25, + "PhaseEncodingSteps": 259, + "AcquisitionMatrixPE": 260, + "ReconMatrixPE": 320, + "PixelBandwidth": 150, + "DwellTime": 1.04e-05, + "ImageOrientationPatientDICOM": [ + 0, + 1, + 0, + 0, + 0, + -1 + ], + "InPlanePhaseEncodingDirectionDICOM": "ROW", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-oxfordFmrib03/anat/sub-oxfordFmrib03_space-other_T2star.json b/derivatives/data_preprocessed/sub-oxfordFmrib03/anat/sub-oxfordFmrib03_space-other_T2star.json index cc7d843457..1bba7195a2 100644 --- a/derivatives/data_preprocessed/sub-oxfordFmrib03/anat/sub-oxfordFmrib03_space-other_T2star.json +++ b/derivatives/data_preprocessed/sub-oxfordFmrib03/anat/sub-oxfordFmrib03_space-other_T2star.json @@ -74,5 +74,9 @@ "InPlanePhaseEncodingDirectionDICOM": "COL", "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0", - "AcquisitionDuration": 285.0 + "AcquisitionDuration": 285.0, + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-oxfordFmrib03/anat/sub-oxfordFmrib03_space-other_T2w.json b/derivatives/data_preprocessed/sub-oxfordFmrib03/anat/sub-oxfordFmrib03_space-other_T2w.json index 7489eb0346..8611a222ab 100644 --- a/derivatives/data_preprocessed/sub-oxfordFmrib03/anat/sub-oxfordFmrib03_space-other_T2w.json +++ b/derivatives/data_preprocessed/sub-oxfordFmrib03/anat/sub-oxfordFmrib03_space-other_T2w.json @@ -1,67 +1,80 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.227, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma", - "InstitutionName": "The_John_Radcliffe", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "Headley_Way_StreetNo_Oxford_District_GB_OX3_9DU", - "DeviceSerialNumber": "66050", - "StationName": "AWP66050", - "BodyPartExamined": "CSPINE", - "PatientPosition": "HFS", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "T2w", - "ProtocolName": "T2w", - "ScanningSequence": "SE", - "SequenceVariant": "SK_SP_OSP", - "ScanOptions": "PFP", - "SequenceName": "_spcR_100", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS3D", "DIS2D"], - "SeriesNumber": 3, - "AcquisitionTime": "15:11:43.040000", - "AcquisitionNumber": 1, - "SliceThickness": 0.8, - "SAR": 0.520327, - "EchoTime": 0.12, - "RepetitionTime": 1.5, - "FlipAngle": 120, - "PartialFourier": 1, - "BaseResolution": 320, - "ShimSetting": [ - 329, - -11489, - 1437, - -30, - 234, - 212, - 86, - -1 ], - "TxRefAmp": 272.469, - "PhaseResolution": 1, - "PhaseOversampling": 0.8, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC5-7;NC1,2", - "CoilString": "HC5-7;NC1_2", - "PulseSequenceDetails": "%SiemensSeq%_tse_vfl", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 100, - "EchoTrainLength": 76, - "PhaseEncodingSteps": 422, - "AcquisitionMatrixPE": 320, - "ReconMatrixPE": 320, - "PixelBandwidth": 625, - "DwellTime": 2.5e-06, - "ImageOrientationPatientDICOM": [ - 0, - 1, - 4.897e-12, - 0, - 4.897e-12, - -1 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 123.227, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma", + "InstitutionName": "The_John_Radcliffe", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "Headley_Way_StreetNo_Oxford_District_GB_OX3_9DU", + "DeviceSerialNumber": "66050", + "StationName": "AWP66050", + "BodyPartExamined": "CSPINE", + "PatientPosition": "HFS", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "T2w", + "ProtocolName": "T2w", + "ScanningSequence": "SE", + "SequenceVariant": "SK_SP_OSP", + "ScanOptions": "PFP", + "SequenceName": "_spcR_100", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS3D", + "DIS2D" + ], + "SeriesNumber": 3, + "AcquisitionTime": "15:11:43.040000", + "AcquisitionNumber": 1, + 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"Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-oxfordFmrib04/anat/sub-oxfordFmrib04_flip-1_mt-on_space-other_MTS.json b/derivatives/data_preprocessed/sub-oxfordFmrib04/anat/sub-oxfordFmrib04_flip-1_mt-on_space-other_MTS.json index eef9ee189f..e5813e3593 100644 --- a/derivatives/data_preprocessed/sub-oxfordFmrib04/anat/sub-oxfordFmrib04_flip-1_mt-on_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-oxfordFmrib04/anat/sub-oxfordFmrib04_flip-1_mt-on_space-other_MTS.json @@ -1,65 +1,75 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.227, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma", - "InstitutionName": "The_John_Radcliffe", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "Headley_Way_StreetNo_Oxford_District_GB_OX3_9DU", - "DeviceSerialNumber": "66050", - "StationName": "AWP66050", - "BodyPartExamined": "HEAD", - "PatientPosition": "HFS", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-MT1", - "ProtocolName": "GRE-MT1", - "ScanningSequence": "GR", - "SequenceVariant": "MTC_SP", - "ScanOptions": "MT", - "SequenceName": "_fl3d1", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "DIS2D"], - "SeriesNumber": 7, - "AcquisitionTime": "17:02:2.962500", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SAR": 0.449227, - "EchoTime": 0.00313, - "RepetitionTime": 0.035, - "FlipAngle": 9, - "PartialFourier": 1, - "BaseResolution": 256, - "ShimSetting": [ - 224, - -11648, - 1472, - -1779, - -506, - 2298, - -480, - 412 ], - "TxRefAmp": 260.547, - "PhaseResolution": 1, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC5-7;NC1,2", - "CoilString": "HC5-7;NC1_2", - "PulseSequenceDetails": "%SiemensSeq%_gre", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 100, - "PhaseEncodingSteps": 255, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 256, - "PixelBandwidth": 260, - "DwellTime": 7.5e-06, - "ImageOrientationPatientDICOM": [ - 0.984808, - 0, - 0.173648, - 0, - 1, - 0 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 123.227, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma", + "InstitutionName": "The_John_Radcliffe", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "Headley_Way_StreetNo_Oxford_District_GB_OX3_9DU", + "DeviceSerialNumber": "66050", + "StationName": "AWP66050", + "BodyPartExamined": "HEAD", + "PatientPosition": "HFS", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-MT1", + "ProtocolName": "GRE-MT1", + "ScanningSequence": "GR", + "SequenceVariant": "MTC_SP", + "ScanOptions": "MT", + "SequenceName": "_fl3d1", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "DIS2D" + ], + "SeriesNumber": 7, + "AcquisitionTime": "17:02:2.962500", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SAR": 0.449227, + "EchoTime": 0.00313, + "RepetitionTime": 0.035, + "FlipAngle": 9, + "PartialFourier": 1, + "BaseResolution": 256, + "ShimSetting": [ + 224, + -11648, + 1472, + -1779, + -506, + 2298, + -480, + 412 + ], + "TxRefAmp": 260.547, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC5-7;NC1,2", + "CoilString": "HC5-7;NC1_2", + "PulseSequenceDetails": "%SiemensSeq%_gre", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 255, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "PixelBandwidth": 260, + "DwellTime": 7.5e-06, + "ImageOrientationPatientDICOM": [ + 0.984808, + 0, + 0.173648, + 0, + 1, + 0 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-oxfordFmrib04/anat/sub-oxfordFmrib04_flip-2_mt-off_space-other_MTS.json b/derivatives/data_preprocessed/sub-oxfordFmrib04/anat/sub-oxfordFmrib04_flip-2_mt-off_space-other_MTS.json index 5b10cc8e50..0e0fefb4b5 100644 --- a/derivatives/data_preprocessed/sub-oxfordFmrib04/anat/sub-oxfordFmrib04_flip-2_mt-off_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-oxfordFmrib04/anat/sub-oxfordFmrib04_flip-2_mt-off_space-other_MTS.json @@ -1,64 +1,74 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.227, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma", - "InstitutionName": "The_John_Radcliffe", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "Headley_Way_StreetNo_Oxford_District_GB_OX3_9DU", - "DeviceSerialNumber": "66050", - "StationName": "AWP66050", - "BodyPartExamined": "HEAD", - "PatientPosition": "HFS", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-T1w", - "ProtocolName": "GRE-T1w", - "ScanningSequence": "GR", - "SequenceVariant": "SP", - "SequenceName": "_fl3d1", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "DIS2D"], - "SeriesNumber": 9, - "AcquisitionTime": "17:06:28.990000", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SAR": 0.0291265, - "EchoTime": 0.00313, - "RepetitionTime": 0.015, - "FlipAngle": 15, - "PartialFourier": 1, - "BaseResolution": 256, - "ShimSetting": [ - 224, - -11648, - 1472, - -1779, - -506, - 2298, - -480, - 412 ], - "TxRefAmp": 260.547, - "PhaseResolution": 1, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC5-7;NC1,2", - "CoilString": "HC5-7;NC1_2", - "PulseSequenceDetails": "%SiemensSeq%_gre", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 100, - "PhaseEncodingSteps": 255, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 256, - "PixelBandwidth": 260, - "DwellTime": 7.5e-06, - "ImageOrientationPatientDICOM": [ - 0.984808, - 0, - 0.173648, - 0, - 1, - 0 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 123.227, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma", + "InstitutionName": "The_John_Radcliffe", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "Headley_Way_StreetNo_Oxford_District_GB_OX3_9DU", + "DeviceSerialNumber": "66050", + "StationName": "AWP66050", + "BodyPartExamined": "HEAD", + "PatientPosition": "HFS", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-T1w", + "ProtocolName": "GRE-T1w", + "ScanningSequence": "GR", + "SequenceVariant": "SP", + "SequenceName": "_fl3d1", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "DIS2D" + ], + "SeriesNumber": 9, + "AcquisitionTime": "17:06:28.990000", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SAR": 0.0291265, + "EchoTime": 0.00313, + "RepetitionTime": 0.015, + "FlipAngle": 15, + "PartialFourier": 1, + "BaseResolution": 256, + "ShimSetting": [ + 224, + -11648, + 1472, + -1779, + -506, + 2298, + -480, + 412 + ], + "TxRefAmp": 260.547, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC5-7;NC1,2", + "CoilString": "HC5-7;NC1_2", + "PulseSequenceDetails": "%SiemensSeq%_gre", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 255, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "PixelBandwidth": 260, + "DwellTime": 7.5e-06, + "ImageOrientationPatientDICOM": [ + 0.984808, + 0, + 0.173648, + 0, + 1, + 0 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-oxfordFmrib04/anat/sub-oxfordFmrib04_space-other_T1w.json b/derivatives/data_preprocessed/sub-oxfordFmrib04/anat/sub-oxfordFmrib04_space-other_T1w.json index a92731a755..0f33b412e0 100644 --- a/derivatives/data_preprocessed/sub-oxfordFmrib04/anat/sub-oxfordFmrib04_space-other_T1w.json +++ b/derivatives/data_preprocessed/sub-oxfordFmrib04/anat/sub-oxfordFmrib04_space-other_T1w.json @@ -1,66 +1,79 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.227, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma", - "InstitutionName": "The_John_Radcliffe", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "Headley_Way_StreetNo_Oxford_District_GB_OX3_9DU", - "DeviceSerialNumber": "66050", - "StationName": "AWP66050", - "BodyPartExamined": "HEAD", - "PatientPosition": "HFS", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "T1w", - "ProtocolName": "T1w", - "ScanningSequence": "GR_IR", - "SequenceVariant": "SK_SP_MP", - "ScanOptions": "IR", - "SequenceName": "_tfl3d1_16", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS3D", "DIS2D"], - "SeriesNumber": 2, - "AcquisitionTime": "16:36:13.057500", - "AcquisitionNumber": 1, - "SliceThickness": 1, - "SAR": 0.055889, - "EchoTime": 0.00372, - "RepetitionTime": 2, - "InversionTime": 1, - "FlipAngle": 9, - "PartialFourier": 1, - "BaseResolution": 320, - "ShimSetting": [ - 329, - -11489, - 1437, - -30, - 234, - 212, - 86, - -1 ], - "TxRefAmp": 256.354, - "PhaseResolution": 1, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC1-7;NC1,2", - "CoilString": "HC1-7;NC1_2", - "PulseSequenceDetails": "%SiemensSeq%_tfl", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 81.25, - "PhaseEncodingSteps": 259, - "AcquisitionMatrixPE": 260, - "ReconMatrixPE": 320, - "PixelBandwidth": 150, - "DwellTime": 1.04e-05, - "ImageOrientationPatientDICOM": [ - 0, - 1, - 0, - 0.140901, - 0, - -0.990024 ], - "InPlanePhaseEncodingDirectionDICOM": "ROW", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 123.227, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma", + "InstitutionName": "The_John_Radcliffe", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "Headley_Way_StreetNo_Oxford_District_GB_OX3_9DU", + "DeviceSerialNumber": "66050", + "StationName": "AWP66050", + "BodyPartExamined": "HEAD", + "PatientPosition": "HFS", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "T1w", + "ProtocolName": "T1w", + "ScanningSequence": "GR_IR", + "SequenceVariant": "SK_SP_MP", + "ScanOptions": "IR", + "SequenceName": "_tfl3d1_16", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS3D", + "DIS2D" + ], + "SeriesNumber": 2, + "AcquisitionTime": "16:36:13.057500", + "AcquisitionNumber": 1, + "SliceThickness": 1, + "SAR": 0.055889, + "EchoTime": 0.00372, + "RepetitionTime": 2, + "InversionTime": 1, + "FlipAngle": 9, + "PartialFourier": 1, + "BaseResolution": 320, + "ShimSetting": [ + 329, + -11489, + 1437, + -30, + 234, + 212, + 86, + -1 + ], + "TxRefAmp": 256.354, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC1-7;NC1,2", + "CoilString": "HC1-7;NC1_2", + "PulseSequenceDetails": "%SiemensSeq%_tfl", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 81.25, + "PhaseEncodingSteps": 259, + "AcquisitionMatrixPE": 260, + "ReconMatrixPE": 320, + "PixelBandwidth": 150, + "DwellTime": 1.04e-05, + "ImageOrientationPatientDICOM": [ + 0, + 1, + 0, + 0.140901, + 0, + -0.990024 + ], + "InPlanePhaseEncodingDirectionDICOM": "ROW", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-oxfordFmrib04/anat/sub-oxfordFmrib04_space-other_T2star.json b/derivatives/data_preprocessed/sub-oxfordFmrib04/anat/sub-oxfordFmrib04_space-other_T2star.json index 695a97158a..494ab11ed6 100644 --- a/derivatives/data_preprocessed/sub-oxfordFmrib04/anat/sub-oxfordFmrib04_space-other_T2star.json +++ b/derivatives/data_preprocessed/sub-oxfordFmrib04/anat/sub-oxfordFmrib04_space-other_T2star.json @@ -74,5 +74,9 @@ "InPlanePhaseEncodingDirectionDICOM": "COL", "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0", - "AcquisitionDuration": 285.0 + "AcquisitionDuration": 285.0, + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-oxfordFmrib04/anat/sub-oxfordFmrib04_space-other_T2w.json b/derivatives/data_preprocessed/sub-oxfordFmrib04/anat/sub-oxfordFmrib04_space-other_T2w.json index 9882a3ae9f..715148d19e 100644 --- a/derivatives/data_preprocessed/sub-oxfordFmrib04/anat/sub-oxfordFmrib04_space-other_T2w.json +++ b/derivatives/data_preprocessed/sub-oxfordFmrib04/anat/sub-oxfordFmrib04_space-other_T2w.json @@ -1,67 +1,80 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.227, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma", - "InstitutionName": "The_John_Radcliffe", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "Headley_Way_StreetNo_Oxford_District_GB_OX3_9DU", - "DeviceSerialNumber": "66050", - "StationName": "AWP66050", - "BodyPartExamined": "HEAD", - "PatientPosition": "HFS", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "T2w", - "ProtocolName": "T2w", - "ScanningSequence": "SE", - "SequenceVariant": "SK_SP_OSP", - "ScanOptions": "PFP", - "SequenceName": "_spcR_100", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS3D", "DIS2D"], - "SeriesNumber": 5, - "AcquisitionTime": "16:53:37.082500", - "AcquisitionNumber": 1, - "SliceThickness": 0.8, - "SAR": 0.454197, - "EchoTime": 0.12, - "RepetitionTime": 1.5, - "FlipAngle": 120, - "PartialFourier": 1, - "BaseResolution": 320, - "ShimSetting": [ - 329, - -11489, - 1437, - -30, - 234, - 212, - 86, - -1 ], - "TxRefAmp": 260.547, - "PhaseResolution": 1, - "PhaseOversampling": 0.8, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC5-7;NC1,2", - "CoilString": "HC5-7;NC1_2", - "PulseSequenceDetails": "%SiemensSeq%_tse_vfl", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 100, - "EchoTrainLength": 76, - "PhaseEncodingSteps": 422, - "AcquisitionMatrixPE": 320, - "ReconMatrixPE": 320, - "PixelBandwidth": 625, - "DwellTime": 2.5e-06, - "ImageOrientationPatientDICOM": [ - -1.118e-12, - 1, - 4.767e-12, - 0.228351, - 4.897e-12, - -0.973579 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 123.227, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma", + "InstitutionName": "The_John_Radcliffe", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "Headley_Way_StreetNo_Oxford_District_GB_OX3_9DU", + "DeviceSerialNumber": "66050", + "StationName": "AWP66050", + "BodyPartExamined": "HEAD", + "PatientPosition": "HFS", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "T2w", + "ProtocolName": "T2w", + "ScanningSequence": "SE", + "SequenceVariant": "SK_SP_OSP", + "ScanOptions": "PFP", + "SequenceName": "_spcR_100", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS3D", + "DIS2D" + ], + "SeriesNumber": 5, + "AcquisitionTime": "16:53:37.082500", + "AcquisitionNumber": 1, + "SliceThickness": 0.8, + "SAR": 0.454197, + "EchoTime": 0.12, + "RepetitionTime": 1.5, + "FlipAngle": 120, + "PartialFourier": 1, + "BaseResolution": 320, + "ShimSetting": [ + 329, + -11489, + 1437, + -30, + 234, + 212, + 86, + -1 + ], + "TxRefAmp": 260.547, + "PhaseResolution": 1, + "PhaseOversampling": 0.8, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC5-7;NC1,2", + "CoilString": "HC5-7;NC1_2", + "PulseSequenceDetails": "%SiemensSeq%_tse_vfl", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "EchoTrainLength": 76, + "PhaseEncodingSteps": 422, + "AcquisitionMatrixPE": 320, + "ReconMatrixPE": 320, + "PixelBandwidth": 625, + "DwellTime": 2.5e-06, + "ImageOrientationPatientDICOM": [ + -1.118e-12, + 1, + 4.767e-12, + 0.228351, + 4.897e-12, + -0.973579 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-oxfordFmrib05/anat/sub-oxfordFmrib05_flip-1_mt-on_space-other_MTS.json b/derivatives/data_preprocessed/sub-oxfordFmrib05/anat/sub-oxfordFmrib05_flip-1_mt-on_space-other_MTS.json index b46aae678a..240fe9d9d5 100644 --- a/derivatives/data_preprocessed/sub-oxfordFmrib05/anat/sub-oxfordFmrib05_flip-1_mt-on_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-oxfordFmrib05/anat/sub-oxfordFmrib05_flip-1_mt-on_space-other_MTS.json @@ -1,65 +1,75 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.227, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma", - "InstitutionName": "The_John_Radcliffe", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "Headley_Way_StreetNo_Oxford_District_GB_OX3_9DU", - "DeviceSerialNumber": "66050", - "StationName": "AWP66050", - "BodyPartExamined": "CSPINE", - "PatientPosition": "HFS", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-MT1", - "ProtocolName": "GRE-MT1", - "ScanningSequence": "GR", - "SequenceVariant": "MTC_SP", - "ScanOptions": "MT", - "SequenceName": "_fl3d1", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "DIS2D"], - "SeriesNumber": 12, - "AcquisitionTime": "14:06:19.970000", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SAR": 0.506254, - "EchoTime": 0.00313, - "RepetitionTime": 0.035, - "FlipAngle": 9, - "PartialFourier": 1, - "BaseResolution": 256, - "ShimSetting": [ - 328, - -11775, - 1495, - -2477, - 555, - 1461, - -259, - -260 ], - "TxRefAmp": 250.169, - "PhaseResolution": 1, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC7;NC1,2", - "CoilString": "HC7;NC1_2", - "PulseSequenceDetails": "%SiemensSeq%_gre", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 100, - "PhaseEncodingSteps": 255, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 256, - "PixelBandwidth": 260, - "DwellTime": 7.5e-06, - "ImageOrientationPatientDICOM": [ - 0.997588, - -0.0045949, - -0.0692653, - 5.18318e-08, - 0.997807, - -0.0661914 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 123.227, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma", + "InstitutionName": "The_John_Radcliffe", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "Headley_Way_StreetNo_Oxford_District_GB_OX3_9DU", + "DeviceSerialNumber": "66050", + "StationName": "AWP66050", + "BodyPartExamined": "CSPINE", + "PatientPosition": "HFS", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-MT1", + "ProtocolName": "GRE-MT1", + "ScanningSequence": "GR", + "SequenceVariant": "MTC_SP", + "ScanOptions": "MT", + "SequenceName": "_fl3d1", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "DIS2D" + ], + "SeriesNumber": 12, + "AcquisitionTime": "14:06:19.970000", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SAR": 0.506254, + "EchoTime": 0.00313, + "RepetitionTime": 0.035, + "FlipAngle": 9, + "PartialFourier": 1, + "BaseResolution": 256, + "ShimSetting": [ + 328, + -11775, + 1495, + -2477, + 555, + 1461, + -259, + -260 + ], + "TxRefAmp": 250.169, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC7;NC1,2", + "CoilString": "HC7;NC1_2", + "PulseSequenceDetails": "%SiemensSeq%_gre", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 255, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "PixelBandwidth": 260, + "DwellTime": 7.5e-06, + "ImageOrientationPatientDICOM": [ + 0.997588, + -0.0045949, + -0.0692653, + 5.18318e-08, + 0.997807, + -0.0661914 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-oxfordFmrib05/anat/sub-oxfordFmrib05_flip-2_mt-off_space-other_MTS.json b/derivatives/data_preprocessed/sub-oxfordFmrib05/anat/sub-oxfordFmrib05_flip-2_mt-off_space-other_MTS.json index 9056d78cc1..8d019a1b07 100644 --- a/derivatives/data_preprocessed/sub-oxfordFmrib05/anat/sub-oxfordFmrib05_flip-2_mt-off_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-oxfordFmrib05/anat/sub-oxfordFmrib05_flip-2_mt-off_space-other_MTS.json @@ -1,64 +1,74 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.227, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma", - "InstitutionName": "The_John_Radcliffe", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "Headley_Way_StreetNo_Oxford_District_GB_OX3_9DU", - "DeviceSerialNumber": "66050", - "StationName": "AWP66050", - "BodyPartExamined": "CSPINE", - "PatientPosition": "HFS", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-T1w", - "ProtocolName": "GRE-T1w", - "ScanningSequence": "GR", - "SequenceVariant": "SP", - "SequenceName": "_fl3d1", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "DIS2D"], - "SeriesNumber": 14, - "AcquisitionTime": "14:10:45.945000", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SAR": 0.0328239, - "EchoTime": 0.00313, - "RepetitionTime": 0.015, - "FlipAngle": 15, - "PartialFourier": 1, - "BaseResolution": 256, - "ShimSetting": [ - 328, - -11775, - 1495, - -2477, - 555, - 1461, - -259, - -260 ], - "TxRefAmp": 250.169, - "PhaseResolution": 1, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC7;NC1,2", - "CoilString": "HC7;NC1_2", - "PulseSequenceDetails": "%SiemensSeq%_gre", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 100, - "PhaseEncodingSteps": 255, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 256, - "PixelBandwidth": 260, - "DwellTime": 7.5e-06, - "ImageOrientationPatientDICOM": [ - 0.997588, - -0.0045949, - -0.0692653, - 5.18318e-08, - 0.997807, - -0.0661914 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 123.227, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma", + "InstitutionName": "The_John_Radcliffe", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "Headley_Way_StreetNo_Oxford_District_GB_OX3_9DU", + "DeviceSerialNumber": "66050", + "StationName": "AWP66050", + "BodyPartExamined": "CSPINE", + "PatientPosition": "HFS", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-T1w", + "ProtocolName": "GRE-T1w", + "ScanningSequence": "GR", + "SequenceVariant": "SP", + "SequenceName": "_fl3d1", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "DIS2D" + ], + "SeriesNumber": 14, + "AcquisitionTime": "14:10:45.945000", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SAR": 0.0328239, + "EchoTime": 0.00313, + "RepetitionTime": 0.015, + "FlipAngle": 15, + "PartialFourier": 1, + "BaseResolution": 256, + "ShimSetting": [ + 328, + -11775, + 1495, + -2477, + 555, + 1461, + -259, + -260 + ], + "TxRefAmp": 250.169, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC7;NC1,2", + "CoilString": "HC7;NC1_2", + "PulseSequenceDetails": "%SiemensSeq%_gre", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 255, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "PixelBandwidth": 260, + "DwellTime": 7.5e-06, + "ImageOrientationPatientDICOM": [ + 0.997588, + -0.0045949, + -0.0692653, + 5.18318e-08, + 0.997807, + -0.0661914 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-oxfordFmrib05/anat/sub-oxfordFmrib05_space-other_T1w.json b/derivatives/data_preprocessed/sub-oxfordFmrib05/anat/sub-oxfordFmrib05_space-other_T1w.json index 5c3867d45c..bc864869dd 100644 --- a/derivatives/data_preprocessed/sub-oxfordFmrib05/anat/sub-oxfordFmrib05_space-other_T1w.json +++ b/derivatives/data_preprocessed/sub-oxfordFmrib05/anat/sub-oxfordFmrib05_space-other_T1w.json @@ -1,66 +1,79 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.227, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma", - "InstitutionName": "The_John_Radcliffe", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "Headley_Way_StreetNo_Oxford_District_GB_OX3_9DU", - "DeviceSerialNumber": "66050", - "StationName": "AWP66050", - "BodyPartExamined": "CSPINE", - "PatientPosition": "HFS", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "T1w", - "ProtocolName": "T1w", - "ScanningSequence": "GR_IR", - "SequenceVariant": "SK_SP_MP", - "ScanOptions": "IR", - "SequenceName": "_tfl3d1_16", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS3D", "DIS2D"], - "SeriesNumber": 9, - "AcquisitionTime": "13:52:38.025000", - "AcquisitionNumber": 1, - "SliceThickness": 1, - "SAR": 0.0567702, - "EchoTime": 0.00372, - "RepetitionTime": 2, - "InversionTime": 1, - "FlipAngle": 9, - "PartialFourier": 1, - "BaseResolution": 320, - "ShimSetting": [ - 329, - -11489, - 1437, - -30, - 234, - 212, - 86, - -1 ], - "TxRefAmp": 235.367, - "PhaseResolution": 1, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC1-7;NC1,2", - "CoilString": "HC1-7;NC1_2", - "PulseSequenceDetails": "%SiemensSeq%_tfl", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 81.25, - "PhaseEncodingSteps": 259, - "AcquisitionMatrixPE": 260, - "ReconMatrixPE": 320, - "PixelBandwidth": 150, - "DwellTime": 1.04e-05, - "ImageOrientationPatientDICOM": [ - 0, - 1, - 0, - -0.0854169, - 0, - -0.996345 ], - "InPlanePhaseEncodingDirectionDICOM": "ROW", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 123.227, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma", + "InstitutionName": "The_John_Radcliffe", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "Headley_Way_StreetNo_Oxford_District_GB_OX3_9DU", + "DeviceSerialNumber": "66050", + "StationName": "AWP66050", + "BodyPartExamined": "CSPINE", + "PatientPosition": "HFS", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "T1w", + "ProtocolName": "T1w", + "ScanningSequence": "GR_IR", + "SequenceVariant": "SK_SP_MP", + "ScanOptions": "IR", + "SequenceName": "_tfl3d1_16", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS3D", + "DIS2D" + ], + "SeriesNumber": 9, + "AcquisitionTime": "13:52:38.025000", + "AcquisitionNumber": 1, + "SliceThickness": 1, + "SAR": 0.0567702, + "EchoTime": 0.00372, + "RepetitionTime": 2, + "InversionTime": 1, + "FlipAngle": 9, + "PartialFourier": 1, + "BaseResolution": 320, + "ShimSetting": [ + 329, + -11489, + 1437, + -30, + 234, + 212, + 86, + -1 + ], + "TxRefAmp": 235.367, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC1-7;NC1,2", + "CoilString": "HC1-7;NC1_2", + "PulseSequenceDetails": "%SiemensSeq%_tfl", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 81.25, + "PhaseEncodingSteps": 259, + "AcquisitionMatrixPE": 260, + "ReconMatrixPE": 320, + "PixelBandwidth": 150, + "DwellTime": 1.04e-05, + "ImageOrientationPatientDICOM": [ + 0, + 1, + 0, + -0.0854169, + 0, + -0.996345 + ], + "InPlanePhaseEncodingDirectionDICOM": "ROW", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-oxfordFmrib05/anat/sub-oxfordFmrib05_space-other_T2star.json b/derivatives/data_preprocessed/sub-oxfordFmrib05/anat/sub-oxfordFmrib05_space-other_T2star.json index 9894ea8abe..1d96ca6c7f 100644 --- a/derivatives/data_preprocessed/sub-oxfordFmrib05/anat/sub-oxfordFmrib05_space-other_T2star.json +++ b/derivatives/data_preprocessed/sub-oxfordFmrib05/anat/sub-oxfordFmrib05_space-other_T2star.json @@ -74,5 +74,9 @@ "InPlanePhaseEncodingDirectionDICOM": "COL", "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0", - "AcquisitionDuration": 285.0 + "AcquisitionDuration": 285.0, + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-oxfordFmrib05/anat/sub-oxfordFmrib05_space-other_T2w.json b/derivatives/data_preprocessed/sub-oxfordFmrib05/anat/sub-oxfordFmrib05_space-other_T2w.json index 79330c2974..c8a39fb23e 100644 --- a/derivatives/data_preprocessed/sub-oxfordFmrib05/anat/sub-oxfordFmrib05_space-other_T2w.json +++ b/derivatives/data_preprocessed/sub-oxfordFmrib05/anat/sub-oxfordFmrib05_space-other_T2w.json @@ -1,67 +1,80 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.227, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma", - "InstitutionName": "The_John_Radcliffe", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "Headley_Way_StreetNo_Oxford_District_GB_OX3_9DU", - "DeviceSerialNumber": "66050", - "StationName": "AWP66050", - "BodyPartExamined": "CSPINE", - "PatientPosition": "HFS", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "T2w", - "ProtocolName": "T2w", - "ScanningSequence": "SE", - "SequenceVariant": "SK_SP_OSP", - "ScanOptions": "PFP", - "SequenceName": "_spcR_100", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS3D", "DIS2D"], - "SeriesNumber": 10, - "AcquisitionTime": "13:58:0.997500", - "AcquisitionNumber": 1, - "SliceThickness": 0.8, - "SAR": 0.511855, - "EchoTime": 0.12, - "RepetitionTime": 1.5, - "FlipAngle": 120, - "PartialFourier": 1, - "BaseResolution": 320, - "ShimSetting": [ - 329, - -11489, - 1437, - -30, - 234, - 212, - 86, - -1 ], - "TxRefAmp": 250.169, - "PhaseResolution": 1, - "PhaseOversampling": 0.8, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC5-7;NC1,2", - "CoilString": "HC5-7;NC1_2", - "PulseSequenceDetails": "%SiemensSeq%_tse_vfl", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 100, - "EchoTrainLength": 76, - "PhaseEncodingSteps": 422, - "AcquisitionMatrixPE": 320, - "ReconMatrixPE": 320, - "PixelBandwidth": 625, - "DwellTime": 2.5e-06, - "ImageOrientationPatientDICOM": [ - 1.11e-13, - 1, - 4.895e-12, - -0.0226874, - 4.897e-12, - -0.999743 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 123.227, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma", + "InstitutionName": "The_John_Radcliffe", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "Headley_Way_StreetNo_Oxford_District_GB_OX3_9DU", + "DeviceSerialNumber": "66050", + "StationName": "AWP66050", + "BodyPartExamined": "CSPINE", + "PatientPosition": "HFS", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "T2w", + "ProtocolName": "T2w", + "ScanningSequence": "SE", + "SequenceVariant": "SK_SP_OSP", + "ScanOptions": "PFP", + "SequenceName": "_spcR_100", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS3D", + "DIS2D" + ], + "SeriesNumber": 10, + "AcquisitionTime": "13:58:0.997500", + "AcquisitionNumber": 1, + "SliceThickness": 0.8, + "SAR": 0.511855, + "EchoTime": 0.12, + "RepetitionTime": 1.5, + "FlipAngle": 120, + "PartialFourier": 1, + "BaseResolution": 320, + "ShimSetting": [ + 329, + -11489, + 1437, + -30, + 234, + 212, + 86, + -1 + ], + "TxRefAmp": 250.169, + "PhaseResolution": 1, + "PhaseOversampling": 0.8, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC5-7;NC1,2", + "CoilString": "HC5-7;NC1_2", + "PulseSequenceDetails": "%SiemensSeq%_tse_vfl", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "EchoTrainLength": 76, + "PhaseEncodingSteps": 422, + "AcquisitionMatrixPE": 320, + "ReconMatrixPE": 320, + "PixelBandwidth": 625, + "DwellTime": 2.5e-06, + "ImageOrientationPatientDICOM": [ + 1.11e-13, + 1, + 4.895e-12, + -0.0226874, + 4.897e-12, + -0.999743 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-oxfordFmrib06/anat/sub-oxfordFmrib06_flip-1_mt-on_space-other_MTS.json b/derivatives/data_preprocessed/sub-oxfordFmrib06/anat/sub-oxfordFmrib06_flip-1_mt-on_space-other_MTS.json index db0ea1b564..398947f446 100644 --- a/derivatives/data_preprocessed/sub-oxfordFmrib06/anat/sub-oxfordFmrib06_flip-1_mt-on_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-oxfordFmrib06/anat/sub-oxfordFmrib06_flip-1_mt-on_space-other_MTS.json @@ -1,65 +1,75 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.227, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma", - "InstitutionName": "The_John_Radcliffe", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "Headley_Way_StreetNo_Oxford_District_GB_OX3_9DU", - "DeviceSerialNumber": "66050", - "StationName": "AWP66050", - "BodyPartExamined": "CSPINE", - "PatientPosition": "HFS", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-MT1", - "ProtocolName": "GRE-MT1", - "ScanningSequence": "GR", - "SequenceVariant": "MTC_SP", - "ScanOptions": "MT", - "SequenceName": "_fl3d1", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "DIS2D"], - "SeriesNumber": 5, - "AcquisitionTime": "16:40:5.935000", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SAR": 0.433257, - "EchoTime": 0.00313, - "RepetitionTime": 0.035, - "FlipAngle": 9, - "PartialFourier": 1, - "BaseResolution": 256, - "ShimSetting": [ - 328, - -11539, - 1409, - -2301, - 380, - 1453, - -1057, - -199 ], - "TxRefAmp": 261.329, - "PhaseResolution": 1, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC7;NC1,2", - "CoilString": "HC7;NC1_2", - "PulseSequenceDetails": "%SiemensSeq%_gre", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 100, - "PhaseEncodingSteps": 255, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 256, - "PixelBandwidth": 260, - "DwellTime": 7.5e-06, - "ImageOrientationPatientDICOM": [ - 1, - 0, - 0, - 0, - 0.984808, - -0.173648 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 123.227, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma", + "InstitutionName": "The_John_Radcliffe", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "Headley_Way_StreetNo_Oxford_District_GB_OX3_9DU", + "DeviceSerialNumber": "66050", + "StationName": "AWP66050", + "BodyPartExamined": "CSPINE", + "PatientPosition": "HFS", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-MT1", + "ProtocolName": "GRE-MT1", + "ScanningSequence": "GR", + "SequenceVariant": "MTC_SP", + "ScanOptions": "MT", + "SequenceName": "_fl3d1", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "DIS2D" + ], + "SeriesNumber": 5, + "AcquisitionTime": "16:40:5.935000", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SAR": 0.433257, + "EchoTime": 0.00313, + "RepetitionTime": 0.035, + "FlipAngle": 9, + "PartialFourier": 1, + "BaseResolution": 256, + "ShimSetting": [ + 328, + -11539, + 1409, + -2301, + 380, + 1453, + -1057, + -199 + ], + "TxRefAmp": 261.329, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC7;NC1,2", + "CoilString": "HC7;NC1_2", + "PulseSequenceDetails": "%SiemensSeq%_gre", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 255, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "PixelBandwidth": 260, + "DwellTime": 7.5e-06, + "ImageOrientationPatientDICOM": [ + 1, + 0, + 0, + 0, + 0.984808, + -0.173648 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-oxfordFmrib06/anat/sub-oxfordFmrib06_flip-2_mt-off_space-other_MTS.json b/derivatives/data_preprocessed/sub-oxfordFmrib06/anat/sub-oxfordFmrib06_flip-2_mt-off_space-other_MTS.json index 18eab3089a..25e0f14d32 100644 --- a/derivatives/data_preprocessed/sub-oxfordFmrib06/anat/sub-oxfordFmrib06_flip-2_mt-off_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-oxfordFmrib06/anat/sub-oxfordFmrib06_flip-2_mt-off_space-other_MTS.json @@ -1,64 +1,74 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.227, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma", - "InstitutionName": "The_John_Radcliffe", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "Headley_Way_StreetNo_Oxford_District_GB_OX3_9DU", - "DeviceSerialNumber": "66050", - "StationName": "AWP66050", - "BodyPartExamined": "CSPINE", - "PatientPosition": "HFS", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-T1w", - "ProtocolName": "GRE-T1w", - "ScanningSequence": "GR", - "SequenceVariant": "SP", - "SequenceName": "_fl3d1", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "DIS2D"], - "SeriesNumber": 7, - "AcquisitionTime": "16:44:39.930000", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SAR": 0.0280911, - "EchoTime": 0.00313, - "RepetitionTime": 0.015, - "FlipAngle": 15, - "PartialFourier": 1, - "BaseResolution": 256, - "ShimSetting": [ - 328, - -11539, - 1409, - -2301, - 380, - 1453, - -1057, - -199 ], - "TxRefAmp": 261.329, - "PhaseResolution": 1, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC7;NC1,2", - "CoilString": "HC7;NC1_2", - "PulseSequenceDetails": "%SiemensSeq%_gre", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 100, - "PhaseEncodingSteps": 255, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 256, - "PixelBandwidth": 260, - "DwellTime": 7.5e-06, - "ImageOrientationPatientDICOM": [ - 1, - 0, - 0, - 0, - 0.984808, - -0.173648 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 123.227, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma", + "InstitutionName": "The_John_Radcliffe", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "Headley_Way_StreetNo_Oxford_District_GB_OX3_9DU", + "DeviceSerialNumber": "66050", + "StationName": "AWP66050", + "BodyPartExamined": "CSPINE", + "PatientPosition": "HFS", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-T1w", + "ProtocolName": "GRE-T1w", + "ScanningSequence": "GR", + "SequenceVariant": "SP", + "SequenceName": "_fl3d1", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "DIS2D" + ], + "SeriesNumber": 7, + "AcquisitionTime": "16:44:39.930000", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SAR": 0.0280911, + "EchoTime": 0.00313, + "RepetitionTime": 0.015, + "FlipAngle": 15, + "PartialFourier": 1, + "BaseResolution": 256, + "ShimSetting": [ + 328, + -11539, + 1409, + -2301, + 380, + 1453, + -1057, + -199 + ], + "TxRefAmp": 261.329, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC7;NC1,2", + "CoilString": "HC7;NC1_2", + "PulseSequenceDetails": "%SiemensSeq%_gre", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 255, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "PixelBandwidth": 260, + "DwellTime": 7.5e-06, + "ImageOrientationPatientDICOM": [ + 1, + 0, + 0, + 0, + 0.984808, + -0.173648 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-oxfordFmrib06/anat/sub-oxfordFmrib06_space-other_T1w.json b/derivatives/data_preprocessed/sub-oxfordFmrib06/anat/sub-oxfordFmrib06_space-other_T1w.json index 015749cc2f..d3ba2d7637 100644 --- a/derivatives/data_preprocessed/sub-oxfordFmrib06/anat/sub-oxfordFmrib06_space-other_T1w.json +++ b/derivatives/data_preprocessed/sub-oxfordFmrib06/anat/sub-oxfordFmrib06_space-other_T1w.json @@ -1,66 +1,79 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.227, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma", - "InstitutionName": "The_John_Radcliffe", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "Headley_Way_StreetNo_Oxford_District_GB_OX3_9DU", - "DeviceSerialNumber": "66050", - "StationName": "AWP66050", - "BodyPartExamined": "CSPINE", - "PatientPosition": "HFS", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "T1w", - "ProtocolName": "T1w", - "ScanningSequence": "GR_IR", - "SequenceVariant": "SK_SP_MP", - "ScanOptions": "IR", - "SequenceName": "_tfl3d1_16", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS3D", "DIS2D"], - "SeriesNumber": 2, - "AcquisitionTime": "16:26:47.007500", - "AcquisitionNumber": 1, - "SliceThickness": 1, - "SAR": 0.055041, - "EchoTime": 0.00372, - "RepetitionTime": 2, - "InversionTime": 1, - "FlipAngle": 9, - "PartialFourier": 1, - "BaseResolution": 320, - "ShimSetting": [ - 329, - -11489, - 1437, - -30, - 234, - 212, - 86, - -1 ], - "TxRefAmp": 258.62, - "PhaseResolution": 1, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC1-7;NC1,2", - "CoilString": "HC1-7;NC1_2", - "PulseSequenceDetails": "%SiemensSeq%_tfl", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 81.25, - "PhaseEncodingSteps": 259, - "AcquisitionMatrixPE": 260, - "ReconMatrixPE": 320, - "PixelBandwidth": 150, - "DwellTime": 1.04e-05, - "ImageOrientationPatientDICOM": [ - 0, - 1, - 0, - -0.0714974, - 0, - -0.997441 ], - "InPlanePhaseEncodingDirectionDICOM": "ROW", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 123.227, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma", + "InstitutionName": "The_John_Radcliffe", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "Headley_Way_StreetNo_Oxford_District_GB_OX3_9DU", + "DeviceSerialNumber": "66050", + "StationName": "AWP66050", + "BodyPartExamined": "CSPINE", + "PatientPosition": "HFS", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "T1w", + "ProtocolName": "T1w", + "ScanningSequence": "GR_IR", + "SequenceVariant": "SK_SP_MP", + "ScanOptions": "IR", + "SequenceName": "_tfl3d1_16", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS3D", + "DIS2D" + ], + "SeriesNumber": 2, + "AcquisitionTime": "16:26:47.007500", + "AcquisitionNumber": 1, + "SliceThickness": 1, + "SAR": 0.055041, + "EchoTime": 0.00372, + "RepetitionTime": 2, + "InversionTime": 1, + "FlipAngle": 9, + "PartialFourier": 1, + "BaseResolution": 320, + "ShimSetting": [ + 329, + -11489, + 1437, + -30, + 234, + 212, + 86, + -1 + ], + "TxRefAmp": 258.62, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC1-7;NC1,2", + "CoilString": "HC1-7;NC1_2", + "PulseSequenceDetails": "%SiemensSeq%_tfl", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 81.25, + "PhaseEncodingSteps": 259, + "AcquisitionMatrixPE": 260, + "ReconMatrixPE": 320, + "PixelBandwidth": 150, + "DwellTime": 1.04e-05, + "ImageOrientationPatientDICOM": [ + 0, + 1, + 0, + -0.0714974, + 0, + -0.997441 + ], + "InPlanePhaseEncodingDirectionDICOM": "ROW", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-oxfordFmrib06/anat/sub-oxfordFmrib06_space-other_T2star.json b/derivatives/data_preprocessed/sub-oxfordFmrib06/anat/sub-oxfordFmrib06_space-other_T2star.json index fbb1bbc9af..5b29c5cd7d 100644 --- a/derivatives/data_preprocessed/sub-oxfordFmrib06/anat/sub-oxfordFmrib06_space-other_T2star.json +++ b/derivatives/data_preprocessed/sub-oxfordFmrib06/anat/sub-oxfordFmrib06_space-other_T2star.json @@ -74,5 +74,9 @@ "InPlanePhaseEncodingDirectionDICOM": "COL", "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0", - "AcquisitionDuration": 285.0 + "AcquisitionDuration": 285.0, + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-oxfordFmrib06/anat/sub-oxfordFmrib06_space-other_T2w.json b/derivatives/data_preprocessed/sub-oxfordFmrib06/anat/sub-oxfordFmrib06_space-other_T2w.json index 8ea465bbd4..3e99b028ab 100644 --- a/derivatives/data_preprocessed/sub-oxfordFmrib06/anat/sub-oxfordFmrib06_space-other_T2w.json +++ b/derivatives/data_preprocessed/sub-oxfordFmrib06/anat/sub-oxfordFmrib06_space-other_T2w.json @@ -1,67 +1,80 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.227, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma", - "InstitutionName": "The_John_Radcliffe", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "Headley_Way_StreetNo_Oxford_District_GB_OX3_9DU", - "DeviceSerialNumber": "66050", - "StationName": "AWP66050", - "BodyPartExamined": "CSPINE", - "PatientPosition": "HFS", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "T2w", - "ProtocolName": "T2w", - "ScanningSequence": "SE", - "SequenceVariant": "SK_SP_OSP", - "ScanOptions": "PFP", - "SequenceName": "_spcR_100", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS3D", "DIS2D"], - "SeriesNumber": 3, - "AcquisitionTime": "16:31:48.010000", - "AcquisitionNumber": 1, - "SliceThickness": 0.8, - "SAR": 0.438051, - "EchoTime": 0.12, - "RepetitionTime": 1.5, - "FlipAngle": 120, - "PartialFourier": 1, - "BaseResolution": 320, - "ShimSetting": [ - 329, - -11489, - 1437, - -30, - 234, - 212, - 86, - -1 ], - "TxRefAmp": 261.329, - "PhaseResolution": 1, - "PhaseOversampling": 0.8, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC5-7;NC1,2", - "CoilString": "HC5-7;NC1_2", - "PulseSequenceDetails": "%SiemensSeq%_tse_vfl", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 100, - "EchoTrainLength": 76, - "PhaseEncodingSteps": 422, - "AcquisitionMatrixPE": 320, - "ReconMatrixPE": 320, - "PixelBandwidth": 625, - "DwellTime": 2.5e-06, - "ImageOrientationPatientDICOM": [ - 2.48e-13, - 1, - 4.89e-12, - -0.050593, - 4.897e-12, - -0.998719 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 123.227, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma", + "InstitutionName": "The_John_Radcliffe", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "Headley_Way_StreetNo_Oxford_District_GB_OX3_9DU", + "DeviceSerialNumber": "66050", + "StationName": "AWP66050", + "BodyPartExamined": "CSPINE", + "PatientPosition": "HFS", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "T2w", + "ProtocolName": "T2w", + "ScanningSequence": "SE", + "SequenceVariant": "SK_SP_OSP", + "ScanOptions": "PFP", + "SequenceName": "_spcR_100", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS3D", + "DIS2D" + ], + "SeriesNumber": 3, + "AcquisitionTime": "16:31:48.010000", + "AcquisitionNumber": 1, + "SliceThickness": 0.8, + "SAR": 0.438051, + "EchoTime": 0.12, + "RepetitionTime": 1.5, + "FlipAngle": 120, + "PartialFourier": 1, + "BaseResolution": 320, + "ShimSetting": [ + 329, + -11489, + 1437, + -30, + 234, + 212, + 86, + -1 + ], + "TxRefAmp": 261.329, + "PhaseResolution": 1, + "PhaseOversampling": 0.8, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC5-7;NC1,2", + "CoilString": "HC5-7;NC1_2", + "PulseSequenceDetails": "%SiemensSeq%_tse_vfl", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "EchoTrainLength": 76, + "PhaseEncodingSteps": 422, + "AcquisitionMatrixPE": 320, + "ReconMatrixPE": 320, + "PixelBandwidth": 625, + "DwellTime": 2.5e-06, + "ImageOrientationPatientDICOM": [ + 2.48e-13, + 1, + 4.89e-12, + -0.050593, + 4.897e-12, + -0.998719 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-oxfordFmrib07/anat/sub-oxfordFmrib07_flip-1_mt-on_space-other_MTS.json b/derivatives/data_preprocessed/sub-oxfordFmrib07/anat/sub-oxfordFmrib07_flip-1_mt-on_space-other_MTS.json index 9f97296097..44ac44bc21 100644 --- a/derivatives/data_preprocessed/sub-oxfordFmrib07/anat/sub-oxfordFmrib07_flip-1_mt-on_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-oxfordFmrib07/anat/sub-oxfordFmrib07_flip-1_mt-on_space-other_MTS.json @@ -1,65 +1,75 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.227, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma", - "InstitutionName": "The_John_Radcliffe", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "Headley_Way_StreetNo_Oxford_District_GB_OX3_9DU", - "DeviceSerialNumber": "66050", - "StationName": "AWP66050", - "BodyPartExamined": "CSPINE", - "PatientPosition": "HFS", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-MT1", - "ProtocolName": "GRE-MT1", - "ScanningSequence": "GR", - "SequenceVariant": "MTC_SP", - "ScanOptions": "MT", - "SequenceName": "_fl3d1", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "DIS2D"], - "SeriesNumber": 5, - "AcquisitionTime": "15:22:38.080000", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SAR": 0.51689, - "EchoTime": 0.00313, - "RepetitionTime": 0.035, - "FlipAngle": 9, - "PartialFourier": 1, - "BaseResolution": 256, - "ShimSetting": [ - 252, - -11718, - 1302, - -1817, - 4, - 1793, - -376, - -135 ], - "TxRefAmp": 304.39, - "PhaseResolution": 1, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC7;NC1,2", - "CoilString": "HC7;NC1_2", - "PulseSequenceDetails": "%SiemensSeq%_gre", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 100, - "PhaseEncodingSteps": 255, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 256, - "PixelBandwidth": 260, - "DwellTime": 7.5e-06, - "ImageOrientationPatientDICOM": [ - 1, - 0, - 0, - 0, - 0.998719, - -0.0505929 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 123.227, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma", + "InstitutionName": "The_John_Radcliffe", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "Headley_Way_StreetNo_Oxford_District_GB_OX3_9DU", + "DeviceSerialNumber": "66050", + "StationName": "AWP66050", + "BodyPartExamined": "CSPINE", + "PatientPosition": "HFS", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-MT1", + "ProtocolName": "GRE-MT1", + "ScanningSequence": "GR", + "SequenceVariant": "MTC_SP", + "ScanOptions": "MT", + "SequenceName": "_fl3d1", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "DIS2D" + ], + "SeriesNumber": 5, + "AcquisitionTime": "15:22:38.080000", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SAR": 0.51689, + "EchoTime": 0.00313, + "RepetitionTime": 0.035, + "FlipAngle": 9, + "PartialFourier": 1, + "BaseResolution": 256, + "ShimSetting": [ + 252, + -11718, + 1302, + -1817, + 4, + 1793, + -376, + -135 + ], + "TxRefAmp": 304.39, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC7;NC1,2", + "CoilString": "HC7;NC1_2", + "PulseSequenceDetails": "%SiemensSeq%_gre", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 255, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "PixelBandwidth": 260, + "DwellTime": 7.5e-06, + "ImageOrientationPatientDICOM": [ + 1, + 0, + 0, + 0, + 0.998719, + -0.0505929 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-oxfordFmrib07/anat/sub-oxfordFmrib07_flip-2_mt-off_space-other_MTS.json b/derivatives/data_preprocessed/sub-oxfordFmrib07/anat/sub-oxfordFmrib07_flip-2_mt-off_space-other_MTS.json index 514860fd62..2f01caab52 100644 --- a/derivatives/data_preprocessed/sub-oxfordFmrib07/anat/sub-oxfordFmrib07_flip-2_mt-off_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-oxfordFmrib07/anat/sub-oxfordFmrib07_flip-2_mt-off_space-other_MTS.json @@ -1,64 +1,74 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.227, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma", - "InstitutionName": "The_John_Radcliffe", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "Headley_Way_StreetNo_Oxford_District_GB_OX3_9DU", - "DeviceSerialNumber": "66050", - "StationName": "AWP66050", - "BodyPartExamined": "CSPINE", - "PatientPosition": "HFS", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-T1w", - "ProtocolName": "GRE-T1w", - "ScanningSequence": "GR", - "SequenceVariant": "SP", - "SequenceName": "_fl3d1", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "DIS2D"], - "SeriesNumber": 7, - "AcquisitionTime": "15:27:2.950000", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SAR": 0.0335136, - "EchoTime": 0.00313, - "RepetitionTime": 0.015, - "FlipAngle": 15, - "PartialFourier": 1, - "BaseResolution": 256, - "ShimSetting": [ - 252, - -11718, - 1302, - -1817, - 4, - 1793, - -376, - -135 ], - "TxRefAmp": 304.39, - "PhaseResolution": 1, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC7;NC1,2", - "CoilString": "HC7;NC1_2", - "PulseSequenceDetails": "%SiemensSeq%_gre", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 100, - "PhaseEncodingSteps": 255, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 256, - "PixelBandwidth": 260, - "DwellTime": 7.5e-06, - "ImageOrientationPatientDICOM": [ - 1, - 0, - 0, - 0, - 0.998719, - -0.0505929 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 123.227, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma", + "InstitutionName": "The_John_Radcliffe", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "Headley_Way_StreetNo_Oxford_District_GB_OX3_9DU", + "DeviceSerialNumber": "66050", + "StationName": "AWP66050", + "BodyPartExamined": "CSPINE", + "PatientPosition": "HFS", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-T1w", + "ProtocolName": "GRE-T1w", + "ScanningSequence": "GR", + "SequenceVariant": "SP", + "SequenceName": "_fl3d1", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "DIS2D" + ], + "SeriesNumber": 7, + "AcquisitionTime": "15:27:2.950000", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SAR": 0.0335136, + "EchoTime": 0.00313, + "RepetitionTime": 0.015, + "FlipAngle": 15, + "PartialFourier": 1, + "BaseResolution": 256, + "ShimSetting": [ + 252, + -11718, + 1302, + -1817, + 4, + 1793, + -376, + -135 + ], + "TxRefAmp": 304.39, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC7;NC1,2", + "CoilString": "HC7;NC1_2", + "PulseSequenceDetails": "%SiemensSeq%_gre", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 255, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "PixelBandwidth": 260, + "DwellTime": 7.5e-06, + "ImageOrientationPatientDICOM": [ + 1, + 0, + 0, + 0, + 0.998719, + -0.0505929 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-oxfordFmrib07/anat/sub-oxfordFmrib07_space-other_T1w.json b/derivatives/data_preprocessed/sub-oxfordFmrib07/anat/sub-oxfordFmrib07_space-other_T1w.json index bbdb47ba54..9c3a4a2907 100644 --- a/derivatives/data_preprocessed/sub-oxfordFmrib07/anat/sub-oxfordFmrib07_space-other_T1w.json +++ b/derivatives/data_preprocessed/sub-oxfordFmrib07/anat/sub-oxfordFmrib07_space-other_T1w.json @@ -1,66 +1,79 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.228, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma", - "InstitutionName": "The_John_Radcliffe", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "Headley_Way_StreetNo_Oxford_District_GB_OX3_9DU", - "DeviceSerialNumber": "66050", - "StationName": "AWP66050", - "BodyPartExamined": "CSPINE", - "PatientPosition": "HFS", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "T1w", - "ProtocolName": "T1w", - "ScanningSequence": "GR_IR", - "SequenceVariant": "SK_SP_MP", - "ScanOptions": "IR", - "SequenceName": "_tfl3d1_16", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS3D", "DIS2D"], - "SeriesNumber": 2, - "AcquisitionTime": "15:08:23.027500", - "AcquisitionNumber": 1, - "SliceThickness": 1, - "SAR": 0.0608295, - "EchoTime": 0.00372, - "RepetitionTime": 2, - "InversionTime": 1, - "FlipAngle": 9, - "PartialFourier": 1, - "BaseResolution": 320, - "ShimSetting": [ - 329, - -11489, - 1437, - -30, - 234, - 212, - 86, - -1 ], - "TxRefAmp": 288.237, - "PhaseResolution": 1, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC1-7;NC1,2", - "CoilString": "HC1-7;NC1_2", - "PulseSequenceDetails": "%SiemensSeq%_tfl", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 81.25, - "PhaseEncodingSteps": 259, - "AcquisitionMatrixPE": 260, - "ReconMatrixPE": 320, - "PixelBandwidth": 150, - "DwellTime": 1.04e-05, - "ImageOrientationPatientDICOM": [ - 0, - 1, - 0, - 0, - 0, - -1 ], - "InPlanePhaseEncodingDirectionDICOM": "ROW", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 123.228, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma", + "InstitutionName": "The_John_Radcliffe", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "Headley_Way_StreetNo_Oxford_District_GB_OX3_9DU", + "DeviceSerialNumber": "66050", + "StationName": "AWP66050", + "BodyPartExamined": "CSPINE", + "PatientPosition": "HFS", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "T1w", + "ProtocolName": "T1w", + "ScanningSequence": "GR_IR", + "SequenceVariant": "SK_SP_MP", + "ScanOptions": "IR", + "SequenceName": "_tfl3d1_16", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS3D", + "DIS2D" + ], + "SeriesNumber": 2, + "AcquisitionTime": "15:08:23.027500", + "AcquisitionNumber": 1, + "SliceThickness": 1, + "SAR": 0.0608295, + "EchoTime": 0.00372, + "RepetitionTime": 2, + "InversionTime": 1, + "FlipAngle": 9, + "PartialFourier": 1, + "BaseResolution": 320, + "ShimSetting": [ + 329, + -11489, + 1437, + -30, + 234, + 212, + 86, + -1 + ], + "TxRefAmp": 288.237, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC1-7;NC1,2", + "CoilString": "HC1-7;NC1_2", + "PulseSequenceDetails": "%SiemensSeq%_tfl", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 81.25, + "PhaseEncodingSteps": 259, + "AcquisitionMatrixPE": 260, + "ReconMatrixPE": 320, + "PixelBandwidth": 150, + "DwellTime": 1.04e-05, + "ImageOrientationPatientDICOM": [ + 0, + 1, + 0, + 0, + 0, + -1 + ], + "InPlanePhaseEncodingDirectionDICOM": "ROW", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-oxfordFmrib07/anat/sub-oxfordFmrib07_space-other_T2star.json b/derivatives/data_preprocessed/sub-oxfordFmrib07/anat/sub-oxfordFmrib07_space-other_T2star.json index ccda3b870e..ca6a41d22f 100644 --- a/derivatives/data_preprocessed/sub-oxfordFmrib07/anat/sub-oxfordFmrib07_space-other_T2star.json +++ b/derivatives/data_preprocessed/sub-oxfordFmrib07/anat/sub-oxfordFmrib07_space-other_T2star.json @@ -74,5 +74,9 @@ "InPlanePhaseEncodingDirectionDICOM": "COL", "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0", - "AcquisitionDuration": 285.0 + "AcquisitionDuration": 285.0, + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-oxfordFmrib07/anat/sub-oxfordFmrib07_space-other_T2w.json b/derivatives/data_preprocessed/sub-oxfordFmrib07/anat/sub-oxfordFmrib07_space-other_T2w.json index 0b0dfb8a28..6b57fbed6c 100644 --- a/derivatives/data_preprocessed/sub-oxfordFmrib07/anat/sub-oxfordFmrib07_space-other_T2w.json +++ b/derivatives/data_preprocessed/sub-oxfordFmrib07/anat/sub-oxfordFmrib07_space-other_T2w.json @@ -1,67 +1,80 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.228, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma", - "InstitutionName": "The_John_Radcliffe", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "Headley_Way_StreetNo_Oxford_District_GB_OX3_9DU", - "DeviceSerialNumber": "66050", - "StationName": "AWP66050", - "BodyPartExamined": "CSPINE", - "PatientPosition": "HFS", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "T2w", - "ProtocolName": "T2w", - "ScanningSequence": "SE", - "SequenceVariant": "SK_SP_OSP", - "ScanOptions": "PFP", - "SequenceName": "_spcR_100", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS3D", "DIS2D"], - "SeriesNumber": 3, - "AcquisitionTime": "15:13:34.040000", - "AcquisitionNumber": 1, - "SliceThickness": 0.8, - "SAR": 0.522608, - "EchoTime": 0.12, - "RepetitionTime": 1.5, - "FlipAngle": 120, - "PartialFourier": 1, - "BaseResolution": 320, - "ShimSetting": [ - 329, - -11489, - 1437, - -30, - 234, - 212, - 86, - -1 ], - "TxRefAmp": 304.39, - "PhaseResolution": 1, - "PhaseOversampling": 0.8, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC5-7;NC1,2", - "CoilString": "HC5-7;NC1_2", - "PulseSequenceDetails": "%SiemensSeq%_tse_vfl", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 100, - "EchoTrainLength": 76, - "PhaseEncodingSteps": 422, - "AcquisitionMatrixPE": 320, - "ReconMatrixPE": 320, - "PixelBandwidth": 625, - "DwellTime": 2.5e-06, - "ImageOrientationPatientDICOM": [ - 0, - 1, - 4.897e-12, - 0, - 4.897e-12, - -1 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 123.228, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma", + "InstitutionName": "The_John_Radcliffe", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "Headley_Way_StreetNo_Oxford_District_GB_OX3_9DU", + "DeviceSerialNumber": "66050", + "StationName": "AWP66050", + "BodyPartExamined": "CSPINE", + "PatientPosition": "HFS", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "T2w", + "ProtocolName": "T2w", + "ScanningSequence": "SE", + "SequenceVariant": "SK_SP_OSP", + "ScanOptions": "PFP", + "SequenceName": "_spcR_100", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS3D", + "DIS2D" + ], + "SeriesNumber": 3, + "AcquisitionTime": "15:13:34.040000", + "AcquisitionNumber": 1, + "SliceThickness": 0.8, + "SAR": 0.522608, + "EchoTime": 0.12, + "RepetitionTime": 1.5, + "FlipAngle": 120, + "PartialFourier": 1, + "BaseResolution": 320, + "ShimSetting": [ + 329, + -11489, + 1437, + -30, + 234, + 212, + 86, + -1 + ], + "TxRefAmp": 304.39, + "PhaseResolution": 1, + "PhaseOversampling": 0.8, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC5-7;NC1,2", + "CoilString": "HC5-7;NC1_2", + "PulseSequenceDetails": "%SiemensSeq%_tse_vfl", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "EchoTrainLength": 76, + "PhaseEncodingSteps": 422, + "AcquisitionMatrixPE": 320, + "ReconMatrixPE": 320, + "PixelBandwidth": 625, + "DwellTime": 2.5e-06, + "ImageOrientationPatientDICOM": [ + 0, + 1, + 4.897e-12, + 0, + 4.897e-12, + -1 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-oxfordFmrib08/anat/sub-oxfordFmrib08_flip-1_mt-on_space-other_MTS.json b/derivatives/data_preprocessed/sub-oxfordFmrib08/anat/sub-oxfordFmrib08_flip-1_mt-on_space-other_MTS.json index a70d19102b..2a053e5e4b 100644 --- a/derivatives/data_preprocessed/sub-oxfordFmrib08/anat/sub-oxfordFmrib08_flip-1_mt-on_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-oxfordFmrib08/anat/sub-oxfordFmrib08_flip-1_mt-on_space-other_MTS.json @@ -1,65 +1,75 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.227, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma", - "InstitutionName": "The_John_Radcliffe", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "Headley_Way_StreetNo_Oxford_District_GB_OX3_9DU", - "DeviceSerialNumber": "66050", - "StationName": "AWP66050", - "BodyPartExamined": "CSPINE", - "PatientPosition": "HFS", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-MT1", - "ProtocolName": "GRE-MT1", - "ScanningSequence": "GR", - "SequenceVariant": "MTC_SP", - "ScanOptions": "MT", - "SequenceName": "_fl3d1", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "DIS2D"], - "SeriesNumber": 5, - "AcquisitionTime": "16:44:36.477500", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SAR": 0.505386, - "EchoTime": 0.00313, - "RepetitionTime": 0.035, - "FlipAngle": 9, - "PartialFourier": 1, - "BaseResolution": 256, - "ShimSetting": [ - 327, - -11566, - 1493, - -2210, - 471, - 2248, - -717, - -104 ], - "TxRefAmp": 244.874, - "PhaseResolution": 1, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC7;NC1,2", - "CoilString": "HC7;NC1_2", - "PulseSequenceDetails": "%SiemensSeq%_gre", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 100, - "PhaseEncodingSteps": 255, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 256, - "PixelBandwidth": 260, - "DwellTime": 7.5e-06, - "ImageOrientationPatientDICOM": [ - 0.99945, - 0.000231596, - -0.0331536, - -9.62353e-09, - 0.999976, - 0.0069851 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 123.227, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma", + "InstitutionName": "The_John_Radcliffe", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "Headley_Way_StreetNo_Oxford_District_GB_OX3_9DU", + "DeviceSerialNumber": "66050", + "StationName": "AWP66050", + "BodyPartExamined": "CSPINE", + "PatientPosition": "HFS", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-MT1", + "ProtocolName": "GRE-MT1", + "ScanningSequence": "GR", + "SequenceVariant": "MTC_SP", + "ScanOptions": "MT", + "SequenceName": "_fl3d1", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "DIS2D" + ], + "SeriesNumber": 5, + "AcquisitionTime": "16:44:36.477500", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SAR": 0.505386, + "EchoTime": 0.00313, + "RepetitionTime": 0.035, + "FlipAngle": 9, + "PartialFourier": 1, + "BaseResolution": 256, + "ShimSetting": [ + 327, + -11566, + 1493, + -2210, + 471, + 2248, + -717, + -104 + ], + "TxRefAmp": 244.874, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC7;NC1,2", + "CoilString": "HC7;NC1_2", + "PulseSequenceDetails": "%SiemensSeq%_gre", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 255, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "PixelBandwidth": 260, + "DwellTime": 7.5e-06, + "ImageOrientationPatientDICOM": [ + 0.99945, + 0.000231596, + -0.0331536, + -9.62353e-09, + 0.999976, + 0.0069851 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-oxfordFmrib08/anat/sub-oxfordFmrib08_flip-2_mt-off_space-other_MTS.json b/derivatives/data_preprocessed/sub-oxfordFmrib08/anat/sub-oxfordFmrib08_flip-2_mt-off_space-other_MTS.json index 8bfc1a9c7e..4da925233e 100644 --- a/derivatives/data_preprocessed/sub-oxfordFmrib08/anat/sub-oxfordFmrib08_flip-2_mt-off_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-oxfordFmrib08/anat/sub-oxfordFmrib08_flip-2_mt-off_space-other_MTS.json @@ -1,64 +1,74 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.227, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma", - "InstitutionName": "The_John_Radcliffe", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "Headley_Way_StreetNo_Oxford_District_GB_OX3_9DU", - "DeviceSerialNumber": "66050", - "StationName": "AWP66050", - "BodyPartExamined": "CSPINE", - "PatientPosition": "HFS", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-T1w", - "ProtocolName": "GRE-T1w", - "ScanningSequence": "GR", - "SequenceVariant": "SP", - "SequenceName": "_fl3d1", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "DIS2D"], - "SeriesNumber": 7, - "AcquisitionTime": "16:49:1.960000", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SAR": 0.0327676, - "EchoTime": 0.00313, - "RepetitionTime": 0.015, - "FlipAngle": 15, - "PartialFourier": 1, - "BaseResolution": 256, - "ShimSetting": [ - 327, - -11566, - 1493, - -2210, - 471, - 2248, - -717, - -104 ], - "TxRefAmp": 244.874, - "PhaseResolution": 1, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC7;NC1,2", - "CoilString": "HC7;NC1_2", - "PulseSequenceDetails": "%SiemensSeq%_gre", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 100, - "PhaseEncodingSteps": 255, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 256, - "PixelBandwidth": 260, - "DwellTime": 7.5e-06, - "ImageOrientationPatientDICOM": [ - 0.99945, - 0.000231596, - -0.0331536, - -9.62353e-09, - 0.999976, - 0.0069851 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 123.227, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma", + "InstitutionName": "The_John_Radcliffe", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "Headley_Way_StreetNo_Oxford_District_GB_OX3_9DU", + "DeviceSerialNumber": "66050", + "StationName": "AWP66050", + "BodyPartExamined": "CSPINE", + "PatientPosition": "HFS", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-T1w", + "ProtocolName": "GRE-T1w", + "ScanningSequence": "GR", + "SequenceVariant": "SP", + "SequenceName": "_fl3d1", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "DIS2D" + ], + "SeriesNumber": 7, + "AcquisitionTime": "16:49:1.960000", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SAR": 0.0327676, + "EchoTime": 0.00313, + "RepetitionTime": 0.015, + "FlipAngle": 15, + "PartialFourier": 1, + "BaseResolution": 256, + "ShimSetting": [ + 327, + -11566, + 1493, + -2210, + 471, + 2248, + -717, + -104 + ], + "TxRefAmp": 244.874, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC7;NC1,2", + "CoilString": "HC7;NC1_2", + "PulseSequenceDetails": "%SiemensSeq%_gre", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 255, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "PixelBandwidth": 260, + "DwellTime": 7.5e-06, + "ImageOrientationPatientDICOM": [ + 0.99945, + 0.000231596, + -0.0331536, + -9.62353e-09, + 0.999976, + 0.0069851 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-oxfordFmrib08/anat/sub-oxfordFmrib08_space-other_T1w.json b/derivatives/data_preprocessed/sub-oxfordFmrib08/anat/sub-oxfordFmrib08_space-other_T1w.json index f72eab10bc..3d7e27806e 100644 --- a/derivatives/data_preprocessed/sub-oxfordFmrib08/anat/sub-oxfordFmrib08_space-other_T1w.json +++ b/derivatives/data_preprocessed/sub-oxfordFmrib08/anat/sub-oxfordFmrib08_space-other_T1w.json @@ -1,66 +1,79 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.228, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma", - "InstitutionName": "The_John_Radcliffe", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "Headley_Way_StreetNo_Oxford_District_GB_OX3_9DU", - "DeviceSerialNumber": "66050", - "StationName": "AWP66050", - "BodyPartExamined": "CSPINE", - "PatientPosition": "HFS", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "T1w", - "ProtocolName": "T1w", - "ScanningSequence": "GR_IR", - "SequenceVariant": "SK_SP_MP", - "ScanOptions": "IR", - "SequenceName": "_tfl3d1_16", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS3D", "DIS2D"], - "SeriesNumber": 2, - "AcquisitionTime": "16:31:54.155000", - "AcquisitionNumber": 1, - "SliceThickness": 1, - "SAR": 0.0548792, - "EchoTime": 0.00372, - "RepetitionTime": 2, - "InversionTime": 1, - "FlipAngle": 9, - "PartialFourier": 1, - "BaseResolution": 320, - "ShimSetting": [ - 329, - -11489, - 1437, - -30, - 234, - 212, - 86, - -1 ], - "TxRefAmp": 228.383, - "PhaseResolution": 1, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC1-7;NC1,2", - "CoilString": "HC1-7;NC1_2", - "PulseSequenceDetails": "%SiemensSeq%_tfl", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 81.25, - "PhaseEncodingSteps": 259, - "AcquisitionMatrixPE": 260, - "ReconMatrixPE": 320, - "PixelBandwidth": 150, - "DwellTime": 1.04e-05, - "ImageOrientationPatientDICOM": [ - 0, - 1, - 0, - -0.0401318, - 0, - -0.999194 ], - "InPlanePhaseEncodingDirectionDICOM": "ROW", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 123.228, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma", + "InstitutionName": "The_John_Radcliffe", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "Headley_Way_StreetNo_Oxford_District_GB_OX3_9DU", + "DeviceSerialNumber": "66050", + "StationName": "AWP66050", + "BodyPartExamined": "CSPINE", + "PatientPosition": "HFS", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "T1w", + "ProtocolName": "T1w", + "ScanningSequence": "GR_IR", + "SequenceVariant": "SK_SP_MP", + "ScanOptions": "IR", + "SequenceName": "_tfl3d1_16", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS3D", + "DIS2D" + ], + "SeriesNumber": 2, + "AcquisitionTime": "16:31:54.155000", + "AcquisitionNumber": 1, + "SliceThickness": 1, + "SAR": 0.0548792, + "EchoTime": 0.00372, + "RepetitionTime": 2, + "InversionTime": 1, + "FlipAngle": 9, + "PartialFourier": 1, + "BaseResolution": 320, + "ShimSetting": [ + 329, + -11489, + 1437, + -30, + 234, + 212, + 86, + -1 + ], + "TxRefAmp": 228.383, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC1-7;NC1,2", + "CoilString": "HC1-7;NC1_2", + "PulseSequenceDetails": "%SiemensSeq%_tfl", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 81.25, + "PhaseEncodingSteps": 259, + "AcquisitionMatrixPE": 260, + "ReconMatrixPE": 320, + "PixelBandwidth": 150, + "DwellTime": 1.04e-05, + "ImageOrientationPatientDICOM": [ + 0, + 1, + 0, + -0.0401318, + 0, + -0.999194 + ], + "InPlanePhaseEncodingDirectionDICOM": "ROW", + 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newline at end of file diff --git a/derivatives/data_preprocessed/sub-oxfordFmrib08/anat/sub-oxfordFmrib08_space-other_T2w.json b/derivatives/data_preprocessed/sub-oxfordFmrib08/anat/sub-oxfordFmrib08_space-other_T2w.json index 94d46f2b61..7931e3b814 100644 --- a/derivatives/data_preprocessed/sub-oxfordFmrib08/anat/sub-oxfordFmrib08_space-other_T2w.json +++ b/derivatives/data_preprocessed/sub-oxfordFmrib08/anat/sub-oxfordFmrib08_space-other_T2w.json @@ -1,67 +1,80 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.228, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma", - "InstitutionName": "The_John_Radcliffe", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "Headley_Way_StreetNo_Oxford_District_GB_OX3_9DU", - "DeviceSerialNumber": "66050", - "StationName": "AWP66050", - "BodyPartExamined": "CSPINE", - "PatientPosition": "HFS", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "T2w", - "ProtocolName": "T2w", - "ScanningSequence": "SE", - "SequenceVariant": "SK_SP_OSP", - "ScanOptions": "PFP", - "SequenceName": "_spcR_100", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS3D", "DIS2D"], - "SeriesNumber": 3, - "AcquisitionTime": "16:36:56.080000", - "AcquisitionNumber": 1, - "SliceThickness": 0.8, - "SAR": 0.510977, - "EchoTime": 0.12, - "RepetitionTime": 1.5, - "FlipAngle": 120, - "PartialFourier": 1, - "BaseResolution": 320, - "ShimSetting": [ - 329, - -11489, - 1437, - -30, - 234, - 212, - 86, - -1 ], - "TxRefAmp": 244.874, - "PhaseResolution": 1, - "PhaseOversampling": 0.8, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC5-7;NC1,2", - "CoilString": "HC5-7;NC1_2", - "PulseSequenceDetails": "%SiemensSeq%_tse_vfl", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 100, - "EchoTrainLength": 76, - "PhaseEncodingSteps": 422, - "AcquisitionMatrixPE": 320, - "ReconMatrixPE": 320, - "PixelBandwidth": 625, - "DwellTime": 2.5e-06, - "ImageOrientationPatientDICOM": [ - 1.03e-13, - 1, - 4.896e-12, - -0.0209424, - 4.897e-12, - -0.999781 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 123.228, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma", + "InstitutionName": "The_John_Radcliffe", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "Headley_Way_StreetNo_Oxford_District_GB_OX3_9DU", + "DeviceSerialNumber": "66050", + "StationName": "AWP66050", + "BodyPartExamined": "CSPINE", + "PatientPosition": "HFS", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "T2w", + "ProtocolName": "T2w", + "ScanningSequence": "SE", + "SequenceVariant": "SK_SP_OSP", + "ScanOptions": "PFP", + "SequenceName": "_spcR_100", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS3D", + "DIS2D" + ], + "SeriesNumber": 3, + "AcquisitionTime": "16:36:56.080000", + "AcquisitionNumber": 1, + "SliceThickness": 0.8, + "SAR": 0.510977, + "EchoTime": 0.12, + "RepetitionTime": 1.5, + "FlipAngle": 120, + "PartialFourier": 1, + "BaseResolution": 320, + "ShimSetting": [ + 329, + -11489, + 1437, + -30, + 234, + 212, + 86, + -1 + ], + "TxRefAmp": 244.874, + "PhaseResolution": 1, + "PhaseOversampling": 0.8, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC5-7;NC1,2", + "CoilString": "HC5-7;NC1_2", + "PulseSequenceDetails": "%SiemensSeq%_tse_vfl", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "EchoTrainLength": 76, + "PhaseEncodingSteps": 422, + "AcquisitionMatrixPE": 320, + "ReconMatrixPE": 320, + "PixelBandwidth": 625, + "DwellTime": 2.5e-06, + "ImageOrientationPatientDICOM": [ + 1.03e-13, + 1, + 4.896e-12, + -0.0209424, + 4.897e-12, + -0.999781 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-oxfordFmrib09/anat/sub-oxfordFmrib09_flip-1_mt-on_space-other_MTS.json b/derivatives/data_preprocessed/sub-oxfordFmrib09/anat/sub-oxfordFmrib09_flip-1_mt-on_space-other_MTS.json index b9db4b7a0f..da7fd7dce4 100644 --- a/derivatives/data_preprocessed/sub-oxfordFmrib09/anat/sub-oxfordFmrib09_flip-1_mt-on_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-oxfordFmrib09/anat/sub-oxfordFmrib09_flip-1_mt-on_space-other_MTS.json @@ -1,65 +1,75 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.227, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma", - "InstitutionName": "The_John_Radcliffe", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": 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"ScanningSequence": "GR", + "SequenceVariant": "MTC_SP", + "ScanOptions": "MT", + "SequenceName": "_fl3d1", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "DIS2D" + ], + "SeriesNumber": 7, + "AcquisitionTime": "15:54:59.965000", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SAR": 0.470294, + "EchoTime": 0.00313, + "RepetitionTime": 0.035, + "FlipAngle": 9, + "PartialFourier": 1, + "BaseResolution": 256, + "ShimSetting": [ + 332, + -11698, + 1268, + -884, + 386, + 2955, + 86, + -57 + ], + "TxRefAmp": 273.684, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC7;NC1,2", + "CoilString": "HC7;NC1_2", + "PulseSequenceDetails": "%SiemensSeq%_gre", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 255, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "PixelBandwidth": 260, + "DwellTime": 7.5e-06, + "ImageOrientationPatientDICOM": [ + 1, + 0, + 0, + 0, + 0.993768, + 0.111469 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-oxfordFmrib09/anat/sub-oxfordFmrib09_flip-2_mt-off_space-other_MTS.json b/derivatives/data_preprocessed/sub-oxfordFmrib09/anat/sub-oxfordFmrib09_flip-2_mt-off_space-other_MTS.json index 423fe3b7fa..e98e4388bf 100644 --- a/derivatives/data_preprocessed/sub-oxfordFmrib09/anat/sub-oxfordFmrib09_flip-2_mt-off_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-oxfordFmrib09/anat/sub-oxfordFmrib09_flip-2_mt-off_space-other_MTS.json @@ -1,64 +1,74 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.227, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma", - "InstitutionName": "The_John_Radcliffe", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": 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"GR", + "SequenceVariant": "SP", + "SequenceName": "_fl3d1", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "DIS2D" + ], + "SeriesNumber": 9, + "AcquisitionTime": "15:59:25.957500", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SAR": 0.0304924, + "EchoTime": 0.00313, + "RepetitionTime": 0.015, + "FlipAngle": 15, + "PartialFourier": 1, + "BaseResolution": 256, + "ShimSetting": [ + 332, + -11698, + 1268, + -884, + 386, + 2955, + 86, + -57 + ], + "TxRefAmp": 273.684, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC7;NC1,2", + "CoilString": "HC7;NC1_2", + "PulseSequenceDetails": "%SiemensSeq%_gre", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 255, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "PixelBandwidth": 260, + "DwellTime": 7.5e-06, + "ImageOrientationPatientDICOM": [ + 1, + 0, + 0, + 0, + 0.993768, + 0.111469 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-oxfordFmrib09/anat/sub-oxfordFmrib09_space-other_T1w.json b/derivatives/data_preprocessed/sub-oxfordFmrib09/anat/sub-oxfordFmrib09_space-other_T1w.json index 872217a9b0..62a79ed5e7 100644 --- a/derivatives/data_preprocessed/sub-oxfordFmrib09/anat/sub-oxfordFmrib09_space-other_T1w.json +++ b/derivatives/data_preprocessed/sub-oxfordFmrib09/anat/sub-oxfordFmrib09_space-other_T1w.json @@ -1,66 +1,79 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.228, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma", - "InstitutionName": "The_John_Radcliffe", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "Headley_Way_StreetNo_Oxford_District_GB_OX3_9DU", - "DeviceSerialNumber": "66050", - "StationName": "AWP66050", - "BodyPartExamined": "CSPINE", - "PatientPosition": "HFS", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "T1w", - "ProtocolName": "T1w", - "ScanningSequence": "GR_IR", - "SequenceVariant": "SK_SP_MP", - "ScanOptions": "IR", - "SequenceName": "_tfl3d1_16", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS3D", "DIS2D"], - "SeriesNumber": 4, - "AcquisitionTime": "15:42:24.037500", - "AcquisitionNumber": 1, - "SliceThickness": 1, - "SAR": 0.0557156, - "EchoTime": 0.00372, - "RepetitionTime": 2, - "InversionTime": 1, - "FlipAngle": 9, - "PartialFourier": 1, - "BaseResolution": 320, - "ShimSetting": [ - 329, - -11489, - 1437, - -30, - 234, - 212, - 86, - -1 ], - "TxRefAmp": 259.159, - "PhaseResolution": 1, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC1-7;NC1,2", - "CoilString": "HC1-7;NC1_2", - "PulseSequenceDetails": "%SiemensSeq%_tfl", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 81.25, - "PhaseEncodingSteps": 259, - "AcquisitionMatrixPE": 260, - "ReconMatrixPE": 320, - "PixelBandwidth": 150, - "DwellTime": 1.04e-05, - "ImageOrientationPatientDICOM": [ - 0, - 1, - 0, - 0, - 0, - -1 ], - "InPlanePhaseEncodingDirectionDICOM": "ROW", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 123.228, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma", + "InstitutionName": "The_John_Radcliffe", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "Headley_Way_StreetNo_Oxford_District_GB_OX3_9DU", + "DeviceSerialNumber": "66050", + "StationName": "AWP66050", + "BodyPartExamined": "CSPINE", + "PatientPosition": "HFS", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "T1w", + "ProtocolName": "T1w", + "ScanningSequence": "GR_IR", + "SequenceVariant": "SK_SP_MP", + "ScanOptions": "IR", + "SequenceName": "_tfl3d1_16", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS3D", + "DIS2D" + ], + "SeriesNumber": 4, + "AcquisitionTime": "15:42:24.037500", + "AcquisitionNumber": 1, + "SliceThickness": 1, + "SAR": 0.0557156, + "EchoTime": 0.00372, + "RepetitionTime": 2, + "InversionTime": 1, + "FlipAngle": 9, + "PartialFourier": 1, + "BaseResolution": 320, + "ShimSetting": [ + 329, + -11489, + 1437, + -30, + 234, + 212, + 86, + -1 + ], + "TxRefAmp": 259.159, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC1-7;NC1,2", + "CoilString": "HC1-7;NC1_2", + "PulseSequenceDetails": "%SiemensSeq%_tfl", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 81.25, + "PhaseEncodingSteps": 259, + "AcquisitionMatrixPE": 260, + "ReconMatrixPE": 320, + "PixelBandwidth": 150, + "DwellTime": 1.04e-05, + "ImageOrientationPatientDICOM": [ + 0, + 1, + 0, + 0, + 0, + -1 + ], + "InPlanePhaseEncodingDirectionDICOM": "ROW", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-oxfordFmrib09/anat/sub-oxfordFmrib09_space-other_T2star.json b/derivatives/data_preprocessed/sub-oxfordFmrib09/anat/sub-oxfordFmrib09_space-other_T2star.json index f7033f0ca7..d0b33fe192 100644 --- a/derivatives/data_preprocessed/sub-oxfordFmrib09/anat/sub-oxfordFmrib09_space-other_T2star.json +++ b/derivatives/data_preprocessed/sub-oxfordFmrib09/anat/sub-oxfordFmrib09_space-other_T2star.json @@ -74,5 +74,9 @@ "InPlanePhaseEncodingDirectionDICOM": "COL", "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0", - "AcquisitionDuration": 285.0 + "AcquisitionDuration": 285.0, + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-oxfordFmrib09/anat/sub-oxfordFmrib09_space-other_T2w.json b/derivatives/data_preprocessed/sub-oxfordFmrib09/anat/sub-oxfordFmrib09_space-other_T2w.json index f4e7cb65f3..8e17ee616d 100644 --- a/derivatives/data_preprocessed/sub-oxfordFmrib09/anat/sub-oxfordFmrib09_space-other_T2w.json +++ b/derivatives/data_preprocessed/sub-oxfordFmrib09/anat/sub-oxfordFmrib09_space-other_T2w.json @@ -1,67 +1,80 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.228, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma", - "InstitutionName": "The_John_Radcliffe", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "Headley_Way_StreetNo_Oxford_District_GB_OX3_9DU", - "DeviceSerialNumber": "66050", - "StationName": "AWP66050", - "BodyPartExamined": "CSPINE", - "PatientPosition": "HFS", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "T2w", - "ProtocolName": "T2w", - "ScanningSequence": "SE", - "SequenceVariant": "SK_SP_OSP", - "ScanOptions": "PFP", - "SequenceName": "_spcR_100", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS3D", "DIS2D"], - "SeriesNumber": 5, - "AcquisitionTime": "15:47:30.680000", - "AcquisitionNumber": 1, - "SliceThickness": 0.8, - "SAR": 0.475497, - "EchoTime": 0.12, - "RepetitionTime": 1.5, - "FlipAngle": 120, - "PartialFourier": 1, - "BaseResolution": 320, - "ShimSetting": [ - 329, - -11489, - 1437, - -30, - 234, - 212, - 86, - -1 ], - "TxRefAmp": 273.684, - "PhaseResolution": 1, - "PhaseOversampling": 0.8, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC5-7;NC1,2", - "CoilString": "HC5-7;NC1_2", - "PulseSequenceDetails": "%SiemensSeq%_tse_vfl", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 100, - "EchoTrainLength": 76, - "PhaseEncodingSteps": 422, - "AcquisitionMatrixPE": 320, - "ReconMatrixPE": 320, - "PixelBandwidth": 625, - "DwellTime": 2.5e-06, - "ImageOrientationPatientDICOM": [ - 0, - 1, - 4.897e-12, - 0, - 4.897e-12, - -1 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 123.228, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma", + "InstitutionName": "The_John_Radcliffe", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "Headley_Way_StreetNo_Oxford_District_GB_OX3_9DU", + "DeviceSerialNumber": "66050", + "StationName": "AWP66050", + "BodyPartExamined": "CSPINE", + "PatientPosition": "HFS", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "T2w", + "ProtocolName": "T2w", + "ScanningSequence": "SE", + "SequenceVariant": "SK_SP_OSP", + "ScanOptions": "PFP", + "SequenceName": "_spcR_100", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS3D", + "DIS2D" + ], + "SeriesNumber": 5, + "AcquisitionTime": "15:47:30.680000", + "AcquisitionNumber": 1, + "SliceThickness": 0.8, + "SAR": 0.475497, + "EchoTime": 0.12, + "RepetitionTime": 1.5, + "FlipAngle": 120, + "PartialFourier": 1, + "BaseResolution": 320, + "ShimSetting": [ + 329, + -11489, + 1437, + -30, + 234, + 212, + 86, + -1 + ], + "TxRefAmp": 273.684, + "PhaseResolution": 1, + "PhaseOversampling": 0.8, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC5-7;NC1,2", + "CoilString": "HC5-7;NC1_2", + "PulseSequenceDetails": "%SiemensSeq%_tse_vfl", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "EchoTrainLength": 76, + "PhaseEncodingSteps": 422, + "AcquisitionMatrixPE": 320, + "ReconMatrixPE": 320, + "PixelBandwidth": 625, + "DwellTime": 2.5e-06, + "ImageOrientationPatientDICOM": [ + 0, + 1, + 4.897e-12, + 0, + 4.897e-12, + -1 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-oxfordFmrib10/anat/sub-oxfordFmrib10_flip-1_mt-on_space-other_MTS.json b/derivatives/data_preprocessed/sub-oxfordFmrib10/anat/sub-oxfordFmrib10_flip-1_mt-on_space-other_MTS.json index b492fafd90..ff37b42b77 100644 --- a/derivatives/data_preprocessed/sub-oxfordFmrib10/anat/sub-oxfordFmrib10_flip-1_mt-on_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-oxfordFmrib10/anat/sub-oxfordFmrib10_flip-1_mt-on_space-other_MTS.json @@ -1,65 +1,75 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.227, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma", - "InstitutionName": "The_John_Radcliffe", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "Headley_Way_StreetNo_Oxford_District_GB_OX3_9DU", - "DeviceSerialNumber": "66050", - "StationName": "AWP66050", - "BodyPartExamined": "CSPINE", - "PatientPosition": "HFS", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-MT1", - "ProtocolName": "GRE-MT1", - "ScanningSequence": "GR", - "SequenceVariant": "MTC_SP", - "ScanOptions": "MT", - "SequenceName": "_fl3d1", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "DIS2D"], - "SeriesNumber": 5, - "AcquisitionTime": "15:22:45.020000", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SAR": 0.514122, - "EchoTime": 0.00313, - "RepetitionTime": 0.035, - "FlipAngle": 9, - "PartialFourier": 1, - "BaseResolution": 256, - "ShimSetting": [ - 277, - -11629, - 1355, - -1611, - 32, - 3355, - -610, - -27 ], - "TxRefAmp": 251.926, - "PhaseResolution": 1, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC7;NC1,2", - "CoilString": "HC7;NC1_2", - "PulseSequenceDetails": "%SiemensSeq%_gre", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 100, - "PhaseEncodingSteps": 255, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 256, - "PixelBandwidth": 260, - "DwellTime": 7.5e-06, - "ImageOrientationPatientDICOM": [ - 0.998907, - -0.00578413, - 0.046386, - 2.23546e-08, - 0.992315, - 0.123737 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 123.227, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma", + "InstitutionName": "The_John_Radcliffe", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "Headley_Way_StreetNo_Oxford_District_GB_OX3_9DU", + "DeviceSerialNumber": "66050", + "StationName": "AWP66050", + "BodyPartExamined": "CSPINE", + "PatientPosition": "HFS", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-MT1", + "ProtocolName": "GRE-MT1", + "ScanningSequence": "GR", + "SequenceVariant": "MTC_SP", + "ScanOptions": "MT", + "SequenceName": "_fl3d1", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "DIS2D" + ], + "SeriesNumber": 5, + "AcquisitionTime": "15:22:45.020000", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SAR": 0.514122, + "EchoTime": 0.00313, + "RepetitionTime": 0.035, + "FlipAngle": 9, + "PartialFourier": 1, + "BaseResolution": 256, + "ShimSetting": [ + 277, + -11629, + 1355, + -1611, + 32, + 3355, + -610, + -27 + ], + "TxRefAmp": 251.926, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC7;NC1,2", + "CoilString": "HC7;NC1_2", + "PulseSequenceDetails": "%SiemensSeq%_gre", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 255, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "PixelBandwidth": 260, + "DwellTime": 7.5e-06, + "ImageOrientationPatientDICOM": [ + 0.998907, + -0.00578413, + 0.046386, + 2.23546e-08, + 0.992315, + 0.123737 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-oxfordFmrib10/anat/sub-oxfordFmrib10_flip-2_mt-off_space-other_MTS.json b/derivatives/data_preprocessed/sub-oxfordFmrib10/anat/sub-oxfordFmrib10_flip-2_mt-off_space-other_MTS.json index e89b59f4f3..8ba5e8b9a2 100644 --- a/derivatives/data_preprocessed/sub-oxfordFmrib10/anat/sub-oxfordFmrib10_flip-2_mt-off_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-oxfordFmrib10/anat/sub-oxfordFmrib10_flip-2_mt-off_space-other_MTS.json @@ -1,64 +1,74 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.227, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma", - "InstitutionName": "The_John_Radcliffe", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "Headley_Way_StreetNo_Oxford_District_GB_OX3_9DU", - "DeviceSerialNumber": "66050", - "StationName": "AWP66050", - "BodyPartExamined": "CSPINE", - "PatientPosition": "HFS", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-T1w", - "ProtocolName": "GRE-T1w", - "ScanningSequence": "GR", - "SequenceVariant": "SP", - "SequenceName": "_fl3d1", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "DIS2D"], - "SeriesNumber": 7, - "AcquisitionTime": "15:27:10.937500", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SAR": 0.0333341, - "EchoTime": 0.00313, - "RepetitionTime": 0.015, - "FlipAngle": 15, - "PartialFourier": 1, - "BaseResolution": 256, - "ShimSetting": [ - 277, - -11629, - 1355, - -1611, - 32, - 3355, - -610, - -27 ], - "TxRefAmp": 251.926, - "PhaseResolution": 1, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC7;NC1,2", - "CoilString": "HC7;NC1_2", - "PulseSequenceDetails": "%SiemensSeq%_gre", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 100, - "PhaseEncodingSteps": 255, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 256, - "PixelBandwidth": 260, - "DwellTime": 7.5e-06, - "ImageOrientationPatientDICOM": [ - 0.998907, - -0.00578413, - 0.046386, - 2.23546e-08, - 0.992315, - 0.123737 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 123.227, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma", + "InstitutionName": "The_John_Radcliffe", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "Headley_Way_StreetNo_Oxford_District_GB_OX3_9DU", + "DeviceSerialNumber": "66050", + "StationName": "AWP66050", + "BodyPartExamined": "CSPINE", + "PatientPosition": "HFS", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-T1w", + "ProtocolName": "GRE-T1w", + "ScanningSequence": "GR", + "SequenceVariant": "SP", + "SequenceName": "_fl3d1", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "DIS2D" + ], + "SeriesNumber": 7, + "AcquisitionTime": "15:27:10.937500", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SAR": 0.0333341, + "EchoTime": 0.00313, + "RepetitionTime": 0.015, + "FlipAngle": 15, + "PartialFourier": 1, + "BaseResolution": 256, + "ShimSetting": [ + 277, + -11629, + 1355, + -1611, + 32, + 3355, + -610, + -27 + ], + "TxRefAmp": 251.926, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC7;NC1,2", + "CoilString": "HC7;NC1_2", + "PulseSequenceDetails": "%SiemensSeq%_gre", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 255, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "PixelBandwidth": 260, + "DwellTime": 7.5e-06, + "ImageOrientationPatientDICOM": [ + 0.998907, + -0.00578413, + 0.046386, + 2.23546e-08, + 0.992315, + 0.123737 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-oxfordFmrib10/anat/sub-oxfordFmrib10_space-other_T1w.json b/derivatives/data_preprocessed/sub-oxfordFmrib10/anat/sub-oxfordFmrib10_space-other_T1w.json index d8d0ea0219..f4cb44213d 100644 --- a/derivatives/data_preprocessed/sub-oxfordFmrib10/anat/sub-oxfordFmrib10_space-other_T1w.json +++ b/derivatives/data_preprocessed/sub-oxfordFmrib10/anat/sub-oxfordFmrib10_space-other_T1w.json @@ -1,66 +1,79 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.228, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma", - "InstitutionName": "The_John_Radcliffe", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "Headley_Way_StreetNo_Oxford_District_GB_OX3_9DU", - "DeviceSerialNumber": "66050", - "StationName": "AWP66050", - "BodyPartExamined": "CSPINE", - "PatientPosition": "HFS", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "T1w", - "ProtocolName": "T1w", - "ScanningSequence": "GR_IR", - "SequenceVariant": "SK_SP_MP", - "ScanOptions": "IR", - "SequenceName": "_tfl3d1_16", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS3D", "DIS2D"], - "SeriesNumber": 2, - "AcquisitionTime": "15:09:11.047500", - "AcquisitionNumber": 1, - "SliceThickness": 1, - "SAR": 0.0585813, - "EchoTime": 0.00372, - "RepetitionTime": 2, - "InversionTime": 1, - "FlipAngle": 9, - "PartialFourier": 1, - "BaseResolution": 320, - "ShimSetting": [ - 329, - -11489, - 1437, - -30, - 234, - 212, - 86, - -1 ], - "TxRefAmp": 240.954, - "PhaseResolution": 1, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC1-7;NC1,2", - "CoilString": "HC1-7;NC1_2", - "PulseSequenceDetails": "%SiemensSeq%_tfl", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 81.25, - "PhaseEncodingSteps": 259, - "AcquisitionMatrixPE": 260, - "ReconMatrixPE": 320, - "PixelBandwidth": 150, - "DwellTime": 1.04e-05, - "ImageOrientationPatientDICOM": [ - 0, - 1, - 0, - 0, - 0, - -1 ], - "InPlanePhaseEncodingDirectionDICOM": "ROW", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 123.228, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma", + "InstitutionName": "The_John_Radcliffe", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "Headley_Way_StreetNo_Oxford_District_GB_OX3_9DU", + "DeviceSerialNumber": "66050", + "StationName": "AWP66050", + "BodyPartExamined": "CSPINE", + "PatientPosition": "HFS", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "T1w", + "ProtocolName": "T1w", + "ScanningSequence": "GR_IR", + "SequenceVariant": "SK_SP_MP", + "ScanOptions": "IR", + "SequenceName": "_tfl3d1_16", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS3D", + "DIS2D" + ], + "SeriesNumber": 2, + "AcquisitionTime": "15:09:11.047500", + "AcquisitionNumber": 1, + "SliceThickness": 1, + "SAR": 0.0585813, + "EchoTime": 0.00372, + "RepetitionTime": 2, + "InversionTime": 1, + "FlipAngle": 9, + "PartialFourier": 1, + "BaseResolution": 320, + "ShimSetting": [ + 329, + -11489, + 1437, + -30, + 234, + 212, + 86, + -1 + ], + "TxRefAmp": 240.954, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC1-7;NC1,2", + "CoilString": "HC1-7;NC1_2", + "PulseSequenceDetails": "%SiemensSeq%_tfl", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 81.25, + "PhaseEncodingSteps": 259, + "AcquisitionMatrixPE": 260, + "ReconMatrixPE": 320, + "PixelBandwidth": 150, + "DwellTime": 1.04e-05, + "ImageOrientationPatientDICOM": [ + 0, + 1, + 0, + 0, + 0, + -1 + ], + "InPlanePhaseEncodingDirectionDICOM": "ROW", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-oxfordFmrib10/anat/sub-oxfordFmrib10_space-other_T2star.json b/derivatives/data_preprocessed/sub-oxfordFmrib10/anat/sub-oxfordFmrib10_space-other_T2star.json index 0aa2444dc4..71ebbcc177 100644 --- a/derivatives/data_preprocessed/sub-oxfordFmrib10/anat/sub-oxfordFmrib10_space-other_T2star.json +++ b/derivatives/data_preprocessed/sub-oxfordFmrib10/anat/sub-oxfordFmrib10_space-other_T2star.json @@ -74,5 +74,9 @@ "InPlanePhaseEncodingDirectionDICOM": "COL", "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0", - "AcquisitionDuration": 285.0 + "AcquisitionDuration": 285.0, + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-oxfordFmrib10/anat/sub-oxfordFmrib10_space-other_T2w.json b/derivatives/data_preprocessed/sub-oxfordFmrib10/anat/sub-oxfordFmrib10_space-other_T2w.json index 776158a3f5..6508306813 100644 --- a/derivatives/data_preprocessed/sub-oxfordFmrib10/anat/sub-oxfordFmrib10_space-other_T2w.json +++ b/derivatives/data_preprocessed/sub-oxfordFmrib10/anat/sub-oxfordFmrib10_space-other_T2w.json @@ -1,67 +1,80 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.228, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma", - "InstitutionName": "The_John_Radcliffe", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "Headley_Way_StreetNo_Oxford_District_GB_OX3_9DU", - "DeviceSerialNumber": "66050", - "StationName": "AWP66050", - "BodyPartExamined": "CSPINE", - "PatientPosition": "HFS", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "T2w", - "ProtocolName": "T2w", - "ScanningSequence": "SE", - "SequenceVariant": "SK_SP_OSP", - "ScanOptions": "PFP", - "SequenceName": "_spcR_100", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS3D", "DIS2D"], - "SeriesNumber": 3, - "AcquisitionTime": "15:14:12.027500", - "AcquisitionNumber": 1, - "SliceThickness": 0.8, - "SAR": 0.51981, - "EchoTime": 0.12, - "RepetitionTime": 1.5, - "FlipAngle": 120, - "PartialFourier": 1, - "BaseResolution": 320, - "ShimSetting": [ - 329, - -11489, - 1437, - -30, - 234, - 212, - 86, - -1 ], - "TxRefAmp": 251.926, - "PhaseResolution": 1, - "PhaseOversampling": 0.8, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC5-7;NC1,2", - "CoilString": "HC5-7;NC1_2", - "PulseSequenceDetails": "%SiemensSeq%_tse_vfl", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 100, - "EchoTrainLength": 76, - "PhaseEncodingSteps": 422, - "AcquisitionMatrixPE": 320, - "ReconMatrixPE": 320, - "PixelBandwidth": 625, - "DwellTime": 2.5e-06, - "ImageOrientationPatientDICOM": [ - 0, - 1, - 4.897e-12, - 0, - 4.897e-12, - -1 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 123.228, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma", + "InstitutionName": "The_John_Radcliffe", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "Headley_Way_StreetNo_Oxford_District_GB_OX3_9DU", + "DeviceSerialNumber": "66050", + "StationName": "AWP66050", + "BodyPartExamined": "CSPINE", + "PatientPosition": "HFS", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "T2w", + "ProtocolName": "T2w", + "ScanningSequence": "SE", + "SequenceVariant": "SK_SP_OSP", + "ScanOptions": "PFP", + "SequenceName": "_spcR_100", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS3D", + "DIS2D" + ], + "SeriesNumber": 3, + "AcquisitionTime": "15:14:12.027500", + "AcquisitionNumber": 1, + "SliceThickness": 0.8, + "SAR": 0.51981, + "EchoTime": 0.12, + "RepetitionTime": 1.5, + "FlipAngle": 120, + "PartialFourier": 1, + "BaseResolution": 320, + "ShimSetting": [ + 329, + -11489, + 1437, + -30, + 234, + 212, + 86, + -1 + ], + "TxRefAmp": 251.926, + "PhaseResolution": 1, + "PhaseOversampling": 0.8, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC5-7;NC1,2", + "CoilString": "HC5-7;NC1_2", + "PulseSequenceDetails": "%SiemensSeq%_tse_vfl", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "EchoTrainLength": 76, + "PhaseEncodingSteps": 422, + "AcquisitionMatrixPE": 320, + "ReconMatrixPE": 320, + "PixelBandwidth": 625, + "DwellTime": 2.5e-06, + "ImageOrientationPatientDICOM": [ + 0, + 1, + 4.897e-12, + 0, + 4.897e-12, + -1 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-oxfordFmrib11/anat/sub-oxfordFmrib11_flip-1_mt-on_space-other_MTS.json b/derivatives/data_preprocessed/sub-oxfordFmrib11/anat/sub-oxfordFmrib11_flip-1_mt-on_space-other_MTS.json index 973877f217..ccb56d322a 100644 --- a/derivatives/data_preprocessed/sub-oxfordFmrib11/anat/sub-oxfordFmrib11_flip-1_mt-on_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-oxfordFmrib11/anat/sub-oxfordFmrib11_flip-1_mt-on_space-other_MTS.json @@ -1,65 +1,75 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.227, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma", - "InstitutionName": "The_John_Radcliffe", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "Headley_Way_StreetNo_Oxford_District_GB_OX3_9DU", - "DeviceSerialNumber": "66050", - "StationName": "AWP66050", - "BodyPartExamined": "CSPINE", - "PatientPosition": "HFS", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-MT1", - "ProtocolName": "GRE-MT1", - "ScanningSequence": "GR", - "SequenceVariant": "MTC_SP", - "ScanOptions": "MT", - "SequenceName": "_fl3d1", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "DIS2D"], - "SeriesNumber": 5, - "AcquisitionTime": "17:03:10.987500", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SAR": 0.480494, - "EchoTime": 0.00313, - "RepetitionTime": 0.035, - "FlipAngle": 9, - "PartialFourier": 1, - "BaseResolution": 256, - "ShimSetting": [ - 323, - -11675, - 1362, - -721, - 153, - 2577, - -350, - 2 ], - "TxRefAmp": 274.188, - "PhaseResolution": 1, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC7;NC1,2", - "CoilString": "HC7;NC1_2", - "PulseSequenceDetails": "%SiemensSeq%_gre", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 100, - "PhaseEncodingSteps": 255, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 256, - "PixelBandwidth": 260, - "DwellTime": 7.5e-06, - "ImageOrientationPatientDICOM": [ - 0.998907, - -0.00764098, - 0.0461165, - -2.21946e-08, - 0.98655, - 0.16346 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 123.227, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma", + "InstitutionName": "The_John_Radcliffe", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "Headley_Way_StreetNo_Oxford_District_GB_OX3_9DU", + "DeviceSerialNumber": "66050", + "StationName": "AWP66050", + "BodyPartExamined": "CSPINE", + "PatientPosition": "HFS", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-MT1", + "ProtocolName": "GRE-MT1", + "ScanningSequence": "GR", + "SequenceVariant": "MTC_SP", + "ScanOptions": "MT", + "SequenceName": "_fl3d1", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "DIS2D" + ], + "SeriesNumber": 5, + "AcquisitionTime": "17:03:10.987500", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SAR": 0.480494, + "EchoTime": 0.00313, + "RepetitionTime": 0.035, + "FlipAngle": 9, + "PartialFourier": 1, + "BaseResolution": 256, + "ShimSetting": [ + 323, + -11675, + 1362, + -721, + 153, + 2577, + -350, + 2 + ], + "TxRefAmp": 274.188, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC7;NC1,2", + "CoilString": "HC7;NC1_2", + "PulseSequenceDetails": "%SiemensSeq%_gre", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 255, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "PixelBandwidth": 260, + "DwellTime": 7.5e-06, + "ImageOrientationPatientDICOM": [ + 0.998907, + -0.00764098, + 0.0461165, + -2.21946e-08, + 0.98655, + 0.16346 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-oxfordFmrib11/anat/sub-oxfordFmrib11_flip-2_mt-off_space-other_MTS.json b/derivatives/data_preprocessed/sub-oxfordFmrib11/anat/sub-oxfordFmrib11_flip-2_mt-off_space-other_MTS.json index 3674e71c69..283025033c 100644 --- a/derivatives/data_preprocessed/sub-oxfordFmrib11/anat/sub-oxfordFmrib11_flip-2_mt-off_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-oxfordFmrib11/anat/sub-oxfordFmrib11_flip-2_mt-off_space-other_MTS.json @@ -1,64 +1,74 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.227, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma", - "InstitutionName": "The_John_Radcliffe", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "Headley_Way_StreetNo_Oxford_District_GB_OX3_9DU", - "DeviceSerialNumber": "66050", - "StationName": "AWP66050", - "BodyPartExamined": "CSPINE", - "PatientPosition": "HFS", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-T1w", - "ProtocolName": "GRE-T1w", - "ScanningSequence": "GR", - "SequenceVariant": "SP", - "SequenceName": "_fl3d1", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "DIS2D"], - "SeriesNumber": 7, - "AcquisitionTime": "17:07:35.937500", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SAR": 0.0311537, - "EchoTime": 0.00313, - "RepetitionTime": 0.015, - "FlipAngle": 15, - "PartialFourier": 1, - "BaseResolution": 256, - "ShimSetting": [ - 323, - -11675, - 1362, - -721, - 153, - 2577, - -350, - 2 ], - "TxRefAmp": 274.188, - "PhaseResolution": 1, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC7;NC1,2", - "CoilString": "HC7;NC1_2", - "PulseSequenceDetails": "%SiemensSeq%_gre", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 100, - "PhaseEncodingSteps": 255, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 256, - "PixelBandwidth": 260, - "DwellTime": 7.5e-06, - "ImageOrientationPatientDICOM": [ - 0.998907, - -0.00764098, - 0.0461165, - -2.21946e-08, - 0.98655, - 0.16346 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 123.227, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma", + "InstitutionName": "The_John_Radcliffe", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "Headley_Way_StreetNo_Oxford_District_GB_OX3_9DU", + "DeviceSerialNumber": "66050", + "StationName": "AWP66050", + "BodyPartExamined": "CSPINE", + "PatientPosition": "HFS", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-T1w", + "ProtocolName": "GRE-T1w", + "ScanningSequence": "GR", + "SequenceVariant": "SP", + "SequenceName": "_fl3d1", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "DIS2D" + ], + "SeriesNumber": 7, + "AcquisitionTime": "17:07:35.937500", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SAR": 0.0311537, + "EchoTime": 0.00313, + "RepetitionTime": 0.015, + "FlipAngle": 15, + "PartialFourier": 1, + "BaseResolution": 256, + "ShimSetting": [ + 323, + -11675, + 1362, + -721, + 153, + 2577, + -350, + 2 + ], + "TxRefAmp": 274.188, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC7;NC1,2", + "CoilString": "HC7;NC1_2", + "PulseSequenceDetails": "%SiemensSeq%_gre", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 255, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "PixelBandwidth": 260, + "DwellTime": 7.5e-06, + "ImageOrientationPatientDICOM": [ + 0.998907, + -0.00764098, + 0.0461165, + -2.21946e-08, + 0.98655, + 0.16346 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-oxfordFmrib11/anat/sub-oxfordFmrib11_space-other_T1w.json b/derivatives/data_preprocessed/sub-oxfordFmrib11/anat/sub-oxfordFmrib11_space-other_T1w.json index ee4c75c031..53bf381972 100644 --- a/derivatives/data_preprocessed/sub-oxfordFmrib11/anat/sub-oxfordFmrib11_space-other_T1w.json +++ b/derivatives/data_preprocessed/sub-oxfordFmrib11/anat/sub-oxfordFmrib11_space-other_T1w.json @@ -1,66 +1,79 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.227, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma", - "InstitutionName": "The_John_Radcliffe", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "Headley_Way_StreetNo_Oxford_District_GB_OX3_9DU", - "DeviceSerialNumber": "66050", - "StationName": "AWP66050", - "BodyPartExamined": "CSPINE", - "PatientPosition": "HFS", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "T1w", - "ProtocolName": "T1w", - "ScanningSequence": "GR_IR", - "SequenceVariant": "SK_SP_MP", - "ScanOptions": "IR", - "SequenceName": "_tfl3d1_16", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS3D", "DIS2D"], - "SeriesNumber": 2, - "AcquisitionTime": "16:50:7.045000", - "AcquisitionNumber": 1, - "SliceThickness": 1, - "SAR": 0.0587632, - "EchoTime": 0.00372, - "RepetitionTime": 2, - "InversionTime": 1, - "FlipAngle": 9, - "PartialFourier": 1, - "BaseResolution": 320, - "ShimSetting": [ - 329, - -11489, - 1437, - -30, - 234, - 212, - 86, - -1 ], - "TxRefAmp": 263.927, - "PhaseResolution": 1, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC1-7;NC1,2", - "CoilString": "HC1-7;NC1_2", - "PulseSequenceDetails": "%SiemensSeq%_tfl", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 81.25, - "PhaseEncodingSteps": 259, - "AcquisitionMatrixPE": 260, - "ReconMatrixPE": 320, - "PixelBandwidth": 150, - "DwellTime": 1.04e-05, - "ImageOrientationPatientDICOM": [ - 0, - 1, - 0, - 0, - 0, - -1 ], - "InPlanePhaseEncodingDirectionDICOM": "ROW", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 123.227, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma", + "InstitutionName": "The_John_Radcliffe", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "Headley_Way_StreetNo_Oxford_District_GB_OX3_9DU", + "DeviceSerialNumber": "66050", + "StationName": "AWP66050", + "BodyPartExamined": "CSPINE", + "PatientPosition": "HFS", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "T1w", + "ProtocolName": "T1w", + "ScanningSequence": "GR_IR", + "SequenceVariant": "SK_SP_MP", + "ScanOptions": "IR", + "SequenceName": "_tfl3d1_16", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS3D", + "DIS2D" + ], + "SeriesNumber": 2, + "AcquisitionTime": "16:50:7.045000", + "AcquisitionNumber": 1, + "SliceThickness": 1, + "SAR": 0.0587632, + "EchoTime": 0.00372, + "RepetitionTime": 2, + "InversionTime": 1, + "FlipAngle": 9, + "PartialFourier": 1, + "BaseResolution": 320, + "ShimSetting": [ + 329, + -11489, + 1437, + -30, + 234, + 212, + 86, + -1 + ], + "TxRefAmp": 263.927, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC1-7;NC1,2", + "CoilString": "HC1-7;NC1_2", + "PulseSequenceDetails": "%SiemensSeq%_tfl", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 81.25, + "PhaseEncodingSteps": 259, + "AcquisitionMatrixPE": 260, + "ReconMatrixPE": 320, + "PixelBandwidth": 150, + "DwellTime": 1.04e-05, + "ImageOrientationPatientDICOM": [ + 0, + 1, + 0, + 0, + 0, + -1 + ], + "InPlanePhaseEncodingDirectionDICOM": "ROW", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-oxfordFmrib11/anat/sub-oxfordFmrib11_space-other_T2star.json b/derivatives/data_preprocessed/sub-oxfordFmrib11/anat/sub-oxfordFmrib11_space-other_T2star.json index 10aed39c5a..b3a6d52c0a 100644 --- a/derivatives/data_preprocessed/sub-oxfordFmrib11/anat/sub-oxfordFmrib11_space-other_T2star.json +++ b/derivatives/data_preprocessed/sub-oxfordFmrib11/anat/sub-oxfordFmrib11_space-other_T2star.json @@ -74,5 +74,9 @@ "InPlanePhaseEncodingDirectionDICOM": "COL", "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0", - "AcquisitionDuration": 285.0 + "AcquisitionDuration": 285.0, + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-oxfordFmrib11/anat/sub-oxfordFmrib11_space-other_T2w.json b/derivatives/data_preprocessed/sub-oxfordFmrib11/anat/sub-oxfordFmrib11_space-other_T2w.json index 64db977839..709c79aaab 100644 --- a/derivatives/data_preprocessed/sub-oxfordFmrib11/anat/sub-oxfordFmrib11_space-other_T2w.json +++ b/derivatives/data_preprocessed/sub-oxfordFmrib11/anat/sub-oxfordFmrib11_space-other_T2w.json @@ -1,67 +1,80 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.227, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma", - "InstitutionName": "The_John_Radcliffe", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "Headley_Way_StreetNo_Oxford_District_GB_OX3_9DU", - "DeviceSerialNumber": "66050", - "StationName": "AWP66050", - "BodyPartExamined": "CSPINE", - "PatientPosition": "HFS", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "T2w", - "ProtocolName": "T2w", - "ScanningSequence": "SE", - "SequenceVariant": "SK_SP_OSP", - "ScanOptions": "PFP", - "SequenceName": "_spcR_100", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS3D", "DIS2D"], - "SeriesNumber": 3, - "AcquisitionTime": "16:55:13.987500", - "AcquisitionNumber": 1, - "SliceThickness": 0.8, - "SAR": 0.48581, - "EchoTime": 0.12, - "RepetitionTime": 1.5, - "FlipAngle": 120, - "PartialFourier": 1, - "BaseResolution": 320, - "ShimSetting": [ - 329, - -11489, - 1437, - -30, - 234, - 212, - 86, - -1 ], - "TxRefAmp": 274.188, - "PhaseResolution": 1, - "PhaseOversampling": 0.8, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC5-7;NC1,2", - "CoilString": "HC5-7;NC1_2", - "PulseSequenceDetails": "%SiemensSeq%_tse_vfl", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 100, - "EchoTrainLength": 76, - "PhaseEncodingSteps": 422, - "AcquisitionMatrixPE": 320, - "ReconMatrixPE": 320, - "PixelBandwidth": 625, - "DwellTime": 2.5e-06, - "ImageOrientationPatientDICOM": [ - 0, - 1, - 4.897e-12, - 0, - 4.897e-12, - -1 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 123.227, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma", + "InstitutionName": "The_John_Radcliffe", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "Headley_Way_StreetNo_Oxford_District_GB_OX3_9DU", + "DeviceSerialNumber": "66050", + "StationName": "AWP66050", + "BodyPartExamined": "CSPINE", + "PatientPosition": "HFS", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "T2w", + "ProtocolName": "T2w", + "ScanningSequence": "SE", + "SequenceVariant": "SK_SP_OSP", + "ScanOptions": "PFP", + "SequenceName": "_spcR_100", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS3D", + "DIS2D" + ], + "SeriesNumber": 3, + "AcquisitionTime": "16:55:13.987500", + "AcquisitionNumber": 1, + "SliceThickness": 0.8, + "SAR": 0.48581, + "EchoTime": 0.12, + "RepetitionTime": 1.5, + "FlipAngle": 120, + "PartialFourier": 1, + "BaseResolution": 320, + "ShimSetting": [ + 329, + -11489, + 1437, + -30, + 234, + 212, + 86, + -1 + ], + "TxRefAmp": 274.188, + "PhaseResolution": 1, + "PhaseOversampling": 0.8, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC5-7;NC1,2", + "CoilString": "HC5-7;NC1_2", + "PulseSequenceDetails": "%SiemensSeq%_tse_vfl", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "EchoTrainLength": 76, + "PhaseEncodingSteps": 422, + "AcquisitionMatrixPE": 320, + "ReconMatrixPE": 320, + "PixelBandwidth": 625, + "DwellTime": 2.5e-06, + "ImageOrientationPatientDICOM": [ + 0, + 1, + 4.897e-12, + 0, + 4.897e-12, + -1 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-oxfordOhba01/anat/sub-oxfordOhba01_flip-1_mt-on_space-other_MTS.json b/derivatives/data_preprocessed/sub-oxfordOhba01/anat/sub-oxfordOhba01_flip-1_mt-on_space-other_MTS.json index 8605543a54..1adb6561fb 100644 --- a/derivatives/data_preprocessed/sub-oxfordOhba01/anat/sub-oxfordOhba01_flip-1_mt-on_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-oxfordOhba01/anat/sub-oxfordOhba01_flip-1_mt-on_space-other_MTS.json @@ -1,65 +1,75 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.259, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma", - "InstitutionName": "Warneford_Hospital", - "InstitutionalDepartmentName": "BE3597", - "InstitutionAddress": "Warneford_Lane_StreetNo_Oxford_District_GB_OX3_7JX", - "DeviceSerialNumber": "66093", - "StationName": "AWP66093", - "BodyPartExamined": "CSPINE", - "PatientPosition": "HFS", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-MT1", - "ProtocolName": "GRE-MT1", - "ScanningSequence": "GR", - "SequenceVariant": "MTC_SP", - "ScanOptions": "MT", - "SequenceName": "_fl3d1", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "DIS2D"], - "SeriesNumber": 6, - "AcquisitionTime": "10:33:48.990000", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SAR": 0.45428, - "EchoTime": 0.00313, - "RepetitionTime": 0.035, - "FlipAngle": 9, - "PartialFourier": 1, - "BaseResolution": 256, - "ShimSetting": [ - 4970, - -11502, - -1462, - -1077, - 209, - 2101, - -474, - -104 ], - "TxRefAmp": 270.368, - "PhaseResolution": 1, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC5-7;NC1,2", - "CoilString": "HC5-7;NC1_2", - "PulseSequenceDetails": "%SiemensSeq%_gre", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 100, - "PhaseEncodingSteps": 255, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 256, - "PixelBandwidth": 260, - "DwellTime": 7.5e-06, - "ImageOrientationPatientDICOM": [ - 0.987878, - 0.0194227, - -0.154015, - 2.0464e-09, - 0.992142, - 0.125118 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 123.259, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma", + "InstitutionName": "Warneford_Hospital", + "InstitutionalDepartmentName": "BE3597", + "InstitutionAddress": "Warneford_Lane_StreetNo_Oxford_District_GB_OX3_7JX", + "DeviceSerialNumber": "66093", + "StationName": "AWP66093", + "BodyPartExamined": "CSPINE", + "PatientPosition": "HFS", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-MT1", + "ProtocolName": "GRE-MT1", + "ScanningSequence": "GR", + "SequenceVariant": "MTC_SP", + "ScanOptions": "MT", + "SequenceName": "_fl3d1", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "DIS2D" + ], + "SeriesNumber": 6, + "AcquisitionTime": "10:33:48.990000", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SAR": 0.45428, + "EchoTime": 0.00313, + "RepetitionTime": 0.035, + "FlipAngle": 9, + "PartialFourier": 1, + "BaseResolution": 256, + "ShimSetting": [ + 4970, + -11502, + -1462, + -1077, + 209, + 2101, + -474, + -104 + ], + "TxRefAmp": 270.368, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC5-7;NC1,2", + "CoilString": "HC5-7;NC1_2", + "PulseSequenceDetails": "%SiemensSeq%_gre", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 255, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "PixelBandwidth": 260, + "DwellTime": 7.5e-06, + "ImageOrientationPatientDICOM": [ + 0.987878, + 0.0194227, + -0.154015, + 2.0464e-09, + 0.992142, + 0.125118 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-oxfordOhba01/anat/sub-oxfordOhba01_flip-2_mt-off_space-other_MTS.json b/derivatives/data_preprocessed/sub-oxfordOhba01/anat/sub-oxfordOhba01_flip-2_mt-off_space-other_MTS.json index 849d6261c3..3e452f11b1 100644 --- a/derivatives/data_preprocessed/sub-oxfordOhba01/anat/sub-oxfordOhba01_flip-2_mt-off_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-oxfordOhba01/anat/sub-oxfordOhba01_flip-2_mt-off_space-other_MTS.json @@ -1,64 +1,74 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.259, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma", - "InstitutionName": "Warneford_Hospital", - "InstitutionalDepartmentName": "BE3597", - "InstitutionAddress": "Warneford_Lane_StreetNo_Oxford_District_GB_OX3_7JX", - "DeviceSerialNumber": "66093", - "StationName": "AWP66093", - "BodyPartExamined": "CSPINE", - "PatientPosition": "HFS", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-T1w", - "ProtocolName": "GRE-T1w", - "ScanningSequence": "GR", - "SequenceVariant": "SP", - "SequenceName": "_fl3d1", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "DIS2D"], - "SeriesNumber": 8, - "AcquisitionTime": "10:38:14.980000", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SAR": 0.0294541, - "EchoTime": 0.00313, - "RepetitionTime": 0.015, - "FlipAngle": 15, - "PartialFourier": 1, - "BaseResolution": 256, - "ShimSetting": [ - 4970, - -11502, - -1462, - -1077, - 209, - 2101, - -474, - -104 ], - "TxRefAmp": 270.368, - "PhaseResolution": 1, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC5-7;NC1,2", - "CoilString": "HC5-7;NC1_2", - "PulseSequenceDetails": "%SiemensSeq%_gre", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 100, - "PhaseEncodingSteps": 255, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 256, - "PixelBandwidth": 260, - "DwellTime": 7.5e-06, - "ImageOrientationPatientDICOM": [ - 0.987878, - 0.0194227, - -0.154015, - 2.0464e-09, - 0.992142, - 0.125118 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 123.259, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma", + "InstitutionName": "Warneford_Hospital", + "InstitutionalDepartmentName": "BE3597", + "InstitutionAddress": "Warneford_Lane_StreetNo_Oxford_District_GB_OX3_7JX", + "DeviceSerialNumber": "66093", + "StationName": "AWP66093", + "BodyPartExamined": "CSPINE", + "PatientPosition": "HFS", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-T1w", + "ProtocolName": "GRE-T1w", + "ScanningSequence": "GR", + "SequenceVariant": "SP", + "SequenceName": "_fl3d1", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "DIS2D" + ], + "SeriesNumber": 8, + "AcquisitionTime": "10:38:14.980000", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SAR": 0.0294541, + "EchoTime": 0.00313, + "RepetitionTime": 0.015, + "FlipAngle": 15, + "PartialFourier": 1, + "BaseResolution": 256, + "ShimSetting": [ + 4970, + -11502, + -1462, + -1077, + 209, + 2101, + -474, + -104 + ], + "TxRefAmp": 270.368, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC5-7;NC1,2", + "CoilString": "HC5-7;NC1_2", + "PulseSequenceDetails": "%SiemensSeq%_gre", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 255, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "PixelBandwidth": 260, + "DwellTime": 7.5e-06, + "ImageOrientationPatientDICOM": [ + 0.987878, + 0.0194227, + -0.154015, + 2.0464e-09, + 0.992142, + 0.125118 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-oxfordOhba01/anat/sub-oxfordOhba01_space-other_T1w.json b/derivatives/data_preprocessed/sub-oxfordOhba01/anat/sub-oxfordOhba01_space-other_T1w.json index bea953f27c..810b40df13 100644 --- a/derivatives/data_preprocessed/sub-oxfordOhba01/anat/sub-oxfordOhba01_space-other_T1w.json +++ b/derivatives/data_preprocessed/sub-oxfordOhba01/anat/sub-oxfordOhba01_space-other_T1w.json @@ -1,66 +1,79 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.259, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma", - "InstitutionName": "Warneford_Hospital", - "InstitutionalDepartmentName": "BE3597", - "InstitutionAddress": "Warneford_Lane_StreetNo_Oxford_District_GB_OX3_7JX", - "DeviceSerialNumber": "66093", - "StationName": "AWP66093", - "BodyPartExamined": "CSPINE", - "PatientPosition": "HFS", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "T1w", - "ProtocolName": "T1w", - "ScanningSequence": "GR_IR", - "SequenceVariant": "SK_SP_MP", - "ScanOptions": "IR", - "SequenceName": "_tfl3d1_16", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS3D", "DIS2D"], - "SeriesNumber": 3, - "AcquisitionTime": "10:20:19.027500", - "AcquisitionNumber": 1, - "SliceThickness": 1, - "SAR": 0.0567153, - "EchoTime": 0.00372, - "RepetitionTime": 2, - "InversionTime": 1, - "FlipAngle": 9, - "PartialFourier": 1, - "BaseResolution": 320, - "ShimSetting": [ - 4952, - -11384, - -1600, - 67, - 40, - -1, - -5, - 13 ], - "TxRefAmp": 262.32, - "PhaseResolution": 1, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC1-7;NC1,2", - "CoilString": "HC1-7;NC1_2", - "PulseSequenceDetails": "%SiemensSeq%_tfl", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 81.25, - "PhaseEncodingSteps": 259, - "AcquisitionMatrixPE": 260, - "ReconMatrixPE": 320, - "PixelBandwidth": 150, - "DwellTime": 1.04e-05, - "ImageOrientationPatientDICOM": [ - 0, - 1, - 0, - -0.127065, - 0, - -0.991894 ], - "InPlanePhaseEncodingDirectionDICOM": "ROW", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 123.259, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma", + "InstitutionName": "Warneford_Hospital", + "InstitutionalDepartmentName": "BE3597", + "InstitutionAddress": "Warneford_Lane_StreetNo_Oxford_District_GB_OX3_7JX", + "DeviceSerialNumber": "66093", + "StationName": "AWP66093", + "BodyPartExamined": "CSPINE", + "PatientPosition": "HFS", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "T1w", + "ProtocolName": "T1w", + "ScanningSequence": "GR_IR", + "SequenceVariant": "SK_SP_MP", + "ScanOptions": "IR", + "SequenceName": "_tfl3d1_16", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS3D", + "DIS2D" + ], + "SeriesNumber": 3, + "AcquisitionTime": "10:20:19.027500", + "AcquisitionNumber": 1, + "SliceThickness": 1, + "SAR": 0.0567153, + "EchoTime": 0.00372, + "RepetitionTime": 2, + "InversionTime": 1, + "FlipAngle": 9, + "PartialFourier": 1, + "BaseResolution": 320, + "ShimSetting": [ + 4952, + -11384, + -1600, + 67, + 40, + -1, + -5, + 13 + ], + "TxRefAmp": 262.32, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC1-7;NC1,2", + "CoilString": "HC1-7;NC1_2", + "PulseSequenceDetails": "%SiemensSeq%_tfl", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 81.25, + "PhaseEncodingSteps": 259, + "AcquisitionMatrixPE": 260, + "ReconMatrixPE": 320, + "PixelBandwidth": 150, + "DwellTime": 1.04e-05, + "ImageOrientationPatientDICOM": [ + 0, + 1, + 0, + -0.127065, + 0, + -0.991894 + ], + "InPlanePhaseEncodingDirectionDICOM": "ROW", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-oxfordOhba01/anat/sub-oxfordOhba01_space-other_T2star.json b/derivatives/data_preprocessed/sub-oxfordOhba01/anat/sub-oxfordOhba01_space-other_T2star.json index 6d7965facc..de99917503 100644 --- a/derivatives/data_preprocessed/sub-oxfordOhba01/anat/sub-oxfordOhba01_space-other_T2star.json +++ b/derivatives/data_preprocessed/sub-oxfordOhba01/anat/sub-oxfordOhba01_space-other_T2star.json @@ -74,5 +74,9 @@ "InPlanePhaseEncodingDirectionDICOM": "COL", "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0", - "AcquisitionDuration": 285.0 + "AcquisitionDuration": 285.0, + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-oxfordOhba01/anat/sub-oxfordOhba01_space-other_T2w.json b/derivatives/data_preprocessed/sub-oxfordOhba01/anat/sub-oxfordOhba01_space-other_T2w.json index 44d0f2b80a..ebc192d4a2 100644 --- a/derivatives/data_preprocessed/sub-oxfordOhba01/anat/sub-oxfordOhba01_space-other_T2w.json +++ b/derivatives/data_preprocessed/sub-oxfordOhba01/anat/sub-oxfordOhba01_space-other_T2w.json @@ -1,67 +1,80 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.259, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma", - "InstitutionName": "Warneford_Hospital", - "InstitutionalDepartmentName": "BE3597", - "InstitutionAddress": "Warneford_Lane_StreetNo_Oxford_District_GB_OX3_7JX", - "DeviceSerialNumber": "66093", - "StationName": "AWP66093", - "BodyPartExamined": "CSPINE", - "PatientPosition": "HFS", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "T2w", - "ProtocolName": "T2w", - "ScanningSequence": "SE", - "SequenceVariant": "SK_SP_OSP", - "ScanOptions": "PFP", - "SequenceName": "_spcR_100", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS3D", "DIS2D"], - "SeriesNumber": 4, - "AcquisitionTime": "10:25:19.042500", - "AcquisitionNumber": 1, - "SliceThickness": 0.8, - "SAR": 0.459306, - "EchoTime": 0.12, - "RepetitionTime": 1.5, - "FlipAngle": 120, - "PartialFourier": 1, - "BaseResolution": 320, - "ShimSetting": [ - 4952, - -11384, - -1600, - 67, - 40, - -1, - -5, - 13 ], - "TxRefAmp": 270.368, - "PhaseResolution": 1, - "PhaseOversampling": 0.8, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC5-7;NC1,2", - "CoilString": "HC5-7;NC1_2", - "PulseSequenceDetails": "%SiemensSeq%_tse_vfl", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 100, - "EchoTrainLength": 76, - "PhaseEncodingSteps": 422, - "AcquisitionMatrixPE": 320, - "ReconMatrixPE": 320, - "PixelBandwidth": 625, - "DwellTime": 2.5e-06, - "ImageOrientationPatientDICOM": [ - 5.46e-13, - 1, - 4.866e-12, - -0.111469, - 4.897e-12, - -0.993768 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 123.259, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma", + "InstitutionName": "Warneford_Hospital", + "InstitutionalDepartmentName": "BE3597", + "InstitutionAddress": "Warneford_Lane_StreetNo_Oxford_District_GB_OX3_7JX", + "DeviceSerialNumber": "66093", + "StationName": "AWP66093", + "BodyPartExamined": "CSPINE", + "PatientPosition": "HFS", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "T2w", + "ProtocolName": "T2w", + "ScanningSequence": "SE", + "SequenceVariant": "SK_SP_OSP", + "ScanOptions": "PFP", + "SequenceName": "_spcR_100", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS3D", + "DIS2D" + ], + "SeriesNumber": 4, + "AcquisitionTime": "10:25:19.042500", + "AcquisitionNumber": 1, + "SliceThickness": 0.8, + "SAR": 0.459306, + "EchoTime": 0.12, + "RepetitionTime": 1.5, + "FlipAngle": 120, + "PartialFourier": 1, + "BaseResolution": 320, + "ShimSetting": [ + 4952, + -11384, + -1600, + 67, + 40, + -1, + -5, + 13 + ], + "TxRefAmp": 270.368, + "PhaseResolution": 1, + "PhaseOversampling": 0.8, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC5-7;NC1,2", + "CoilString": "HC5-7;NC1_2", + "PulseSequenceDetails": "%SiemensSeq%_tse_vfl", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "EchoTrainLength": 76, + "PhaseEncodingSteps": 422, + "AcquisitionMatrixPE": 320, + "ReconMatrixPE": 320, + "PixelBandwidth": 625, + "DwellTime": 2.5e-06, + "ImageOrientationPatientDICOM": [ + 5.46e-13, + 1, + 4.866e-12, + -0.111469, + 4.897e-12, + -0.993768 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-oxfordOhba02/anat/sub-oxfordOhba02_flip-1_mt-on_space-other_MTS.json b/derivatives/data_preprocessed/sub-oxfordOhba02/anat/sub-oxfordOhba02_flip-1_mt-on_space-other_MTS.json index 6bdae79612..2887514869 100644 --- a/derivatives/data_preprocessed/sub-oxfordOhba02/anat/sub-oxfordOhba02_flip-1_mt-on_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-oxfordOhba02/anat/sub-oxfordOhba02_flip-1_mt-on_space-other_MTS.json @@ -1,65 +1,75 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.259, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma", - "InstitutionName": "Warneford_Hospital", - "InstitutionalDepartmentName": "BE3597", - "InstitutionAddress": "Warneford_Lane_StreetNo_Oxford_District_GB_OX3_7JX", - "DeviceSerialNumber": "66093", - "StationName": "AWP66093", - "BodyPartExamined": "CSPINE", - "PatientPosition": "HFS", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-MT1", - "ProtocolName": "GRE-MT1", - "ScanningSequence": "GR", - "SequenceVariant": "MTC_SP", - "ScanOptions": "MT", - "SequenceName": "_fl3d1", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "DIS2D"], - "SeriesNumber": 5, - "AcquisitionTime": "10:25:0.940000", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SAR": 0.572325, - "EchoTime": 0.00313, - "RepetitionTime": 0.035, - "FlipAngle": 9, - "PartialFourier": 1, - "BaseResolution": 256, - "ShimSetting": [ - 4907, - -11527, - -1722, - -1175, - -127, - 2028, - -58, - -168 ], - "TxRefAmp": 316.391, - "PhaseResolution": 1, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC5-7;NC1,2", - "CoilString": "HC5-7;NC1_2", - "PulseSequenceDetails": "%SiemensSeq%_gre", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 100, - "PhaseEncodingSteps": 255, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 256, - "PixelBandwidth": 260, - "DwellTime": 7.5e-06, - "ImageOrientationPatientDICOM": [ - 0.992817, - 0.0121809, - -0.119019, - 1.92554e-08, - 0.994804, - 0.101813 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 123.259, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma", + "InstitutionName": "Warneford_Hospital", + "InstitutionalDepartmentName": "BE3597", + "InstitutionAddress": "Warneford_Lane_StreetNo_Oxford_District_GB_OX3_7JX", + "DeviceSerialNumber": "66093", + "StationName": "AWP66093", + "BodyPartExamined": "CSPINE", + "PatientPosition": "HFS", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-MT1", + "ProtocolName": "GRE-MT1", + "ScanningSequence": "GR", + "SequenceVariant": "MTC_SP", + "ScanOptions": "MT", + "SequenceName": "_fl3d1", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "DIS2D" + ], + "SeriesNumber": 5, + "AcquisitionTime": "10:25:0.940000", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SAR": 0.572325, + "EchoTime": 0.00313, + "RepetitionTime": 0.035, + "FlipAngle": 9, + "PartialFourier": 1, + "BaseResolution": 256, + "ShimSetting": [ + 4907, + -11527, + -1722, + -1175, + -127, + 2028, + -58, + -168 + ], + "TxRefAmp": 316.391, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC5-7;NC1,2", + "CoilString": "HC5-7;NC1_2", + "PulseSequenceDetails": "%SiemensSeq%_gre", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 255, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "PixelBandwidth": 260, + "DwellTime": 7.5e-06, + "ImageOrientationPatientDICOM": [ + 0.992817, + 0.0121809, + -0.119019, + 1.92554e-08, + 0.994804, + 0.101813 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-oxfordOhba02/anat/sub-oxfordOhba02_flip-2_mt-off_space-other_MTS.json b/derivatives/data_preprocessed/sub-oxfordOhba02/anat/sub-oxfordOhba02_flip-2_mt-off_space-other_MTS.json index 1b7a9f245a..16131f5587 100644 --- a/derivatives/data_preprocessed/sub-oxfordOhba02/anat/sub-oxfordOhba02_flip-2_mt-off_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-oxfordOhba02/anat/sub-oxfordOhba02_flip-2_mt-off_space-other_MTS.json @@ -1,64 +1,74 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.259, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma", - "InstitutionName": "Warneford_Hospital", - "InstitutionalDepartmentName": "BE3597", - "InstitutionAddress": "Warneford_Lane_StreetNo_Oxford_District_GB_OX3_7JX", - "DeviceSerialNumber": "66093", - "StationName": "AWP66093", - "BodyPartExamined": "CSPINE", - "PatientPosition": "HFS", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-T1w", - "ProtocolName": "GRE-T1w", - "ScanningSequence": "GR", - "SequenceVariant": "SP", - "SequenceName": "_fl3d1", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "DIS2D"], - "SeriesNumber": 7, - "AcquisitionTime": "10:30:10.047500", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SAR": 0.0371078, - "EchoTime": 0.00313, - "RepetitionTime": 0.015, - "FlipAngle": 15, - "PartialFourier": 1, - "BaseResolution": 256, - "ShimSetting": [ - 4907, - -11527, - -1722, - -1175, - -127, - 2028, - -58, - -168 ], - "TxRefAmp": 316.391, - "PhaseResolution": 1, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC5-7;NC1,2", - "CoilString": "HC5-7;NC1_2", - "PulseSequenceDetails": "%SiemensSeq%_gre", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 100, - "PhaseEncodingSteps": 255, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 256, - "PixelBandwidth": 260, - "DwellTime": 7.5e-06, - "ImageOrientationPatientDICOM": [ - 0.992817, - 0.0121809, - -0.119019, - 1.92554e-08, - 0.994804, - 0.101813 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 123.259, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma", + "InstitutionName": "Warneford_Hospital", + "InstitutionalDepartmentName": "BE3597", + "InstitutionAddress": "Warneford_Lane_StreetNo_Oxford_District_GB_OX3_7JX", + "DeviceSerialNumber": "66093", + "StationName": "AWP66093", + "BodyPartExamined": "CSPINE", + "PatientPosition": "HFS", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-T1w", + "ProtocolName": "GRE-T1w", + "ScanningSequence": "GR", + "SequenceVariant": "SP", + "SequenceName": "_fl3d1", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "DIS2D" + ], + "SeriesNumber": 7, + "AcquisitionTime": "10:30:10.047500", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SAR": 0.0371078, + "EchoTime": 0.00313, + "RepetitionTime": 0.015, + "FlipAngle": 15, + "PartialFourier": 1, + "BaseResolution": 256, + "ShimSetting": [ + 4907, + -11527, + -1722, + -1175, + -127, + 2028, + -58, + -168 + ], + "TxRefAmp": 316.391, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC5-7;NC1,2", + "CoilString": "HC5-7;NC1_2", + "PulseSequenceDetails": "%SiemensSeq%_gre", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 255, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "PixelBandwidth": 260, + "DwellTime": 7.5e-06, + "ImageOrientationPatientDICOM": [ + 0.992817, + 0.0121809, + -0.119019, + 1.92554e-08, + 0.994804, + 0.101813 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-oxfordOhba02/anat/sub-oxfordOhba02_space-other_T1w.json b/derivatives/data_preprocessed/sub-oxfordOhba02/anat/sub-oxfordOhba02_space-other_T1w.json index 74455f4d08..a31d1603cf 100644 --- a/derivatives/data_preprocessed/sub-oxfordOhba02/anat/sub-oxfordOhba02_space-other_T1w.json +++ b/derivatives/data_preprocessed/sub-oxfordOhba02/anat/sub-oxfordOhba02_space-other_T1w.json @@ -1,66 +1,79 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.26, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma", - "InstitutionName": "Warneford_Hospital", - "InstitutionalDepartmentName": "BE3597", - "InstitutionAddress": "Warneford_Lane_StreetNo_Oxford_District_GB_OX3_7JX", - "DeviceSerialNumber": "66093", - "StationName": "AWP66093", - "BodyPartExamined": "CSPINE", - "PatientPosition": "HFS", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "T1w", - "ProtocolName": "T1w", - "ScanningSequence": "GR_IR", - "SequenceVariant": "SK_SP_MP", - "ScanOptions": "IR", - "SequenceName": "_tfl3d1_16", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS3D", "DIS2D"], - "SeriesNumber": 2, - "AcquisitionTime": "10:12:0.035000", - "AcquisitionNumber": 1, - "SliceThickness": 1, - "SAR": 0.0668838, - "EchoTime": 0.00372, - "RepetitionTime": 2, - "InversionTime": 1, - "FlipAngle": 9, - "PartialFourier": 1, - "BaseResolution": 320, - "ShimSetting": [ - 4952, - -11384, - -1600, - 67, - 40, - -1, - -5, - 13 ], - "TxRefAmp": 296.887, - "PhaseResolution": 1, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC1-7;NC1,2", - "CoilString": "HC1-7;NC1_2", - "PulseSequenceDetails": "%SiemensSeq%_tfl", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 81.25, - "PhaseEncodingSteps": 259, - "AcquisitionMatrixPE": 260, - "ReconMatrixPE": 320, - "PixelBandwidth": 150, - "DwellTime": 1.04e-05, - "ImageOrientationPatientDICOM": [ - 0, - 1, - 0, - -0.0558215, - 0, - -0.998441 ], - "InPlanePhaseEncodingDirectionDICOM": "ROW", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 123.26, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma", + "InstitutionName": "Warneford_Hospital", + "InstitutionalDepartmentName": "BE3597", + "InstitutionAddress": "Warneford_Lane_StreetNo_Oxford_District_GB_OX3_7JX", + "DeviceSerialNumber": "66093", + "StationName": "AWP66093", + "BodyPartExamined": "CSPINE", + "PatientPosition": "HFS", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "T1w", + "ProtocolName": "T1w", + "ScanningSequence": "GR_IR", + "SequenceVariant": "SK_SP_MP", + "ScanOptions": "IR", + "SequenceName": "_tfl3d1_16", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS3D", + "DIS2D" + ], + "SeriesNumber": 2, + "AcquisitionTime": "10:12:0.035000", + "AcquisitionNumber": 1, + "SliceThickness": 1, + "SAR": 0.0668838, + "EchoTime": 0.00372, + "RepetitionTime": 2, + "InversionTime": 1, + "FlipAngle": 9, + "PartialFourier": 1, + "BaseResolution": 320, + "ShimSetting": [ + 4952, + -11384, + -1600, + 67, + 40, + -1, + -5, + 13 + ], + "TxRefAmp": 296.887, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC1-7;NC1,2", + "CoilString": "HC1-7;NC1_2", + "PulseSequenceDetails": "%SiemensSeq%_tfl", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 81.25, + "PhaseEncodingSteps": 259, + "AcquisitionMatrixPE": 260, + "ReconMatrixPE": 320, + "PixelBandwidth": 150, + "DwellTime": 1.04e-05, + "ImageOrientationPatientDICOM": [ + 0, + 1, + 0, + -0.0558215, + 0, + -0.998441 + ], + "InPlanePhaseEncodingDirectionDICOM": "ROW", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-oxfordOhba02/anat/sub-oxfordOhba02_space-other_T2star.json b/derivatives/data_preprocessed/sub-oxfordOhba02/anat/sub-oxfordOhba02_space-other_T2star.json index 2702890679..8e1f82c00a 100644 --- a/derivatives/data_preprocessed/sub-oxfordOhba02/anat/sub-oxfordOhba02_space-other_T2star.json +++ b/derivatives/data_preprocessed/sub-oxfordOhba02/anat/sub-oxfordOhba02_space-other_T2star.json @@ -74,5 +74,9 @@ "InPlanePhaseEncodingDirectionDICOM": "COL", "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0", - "AcquisitionDuration": 285.0 + "AcquisitionDuration": 285.0, + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-oxfordOhba02/anat/sub-oxfordOhba02_space-other_T2w.json b/derivatives/data_preprocessed/sub-oxfordOhba02/anat/sub-oxfordOhba02_space-other_T2w.json index 2d5ef368d2..cc9d3c82ac 100644 --- a/derivatives/data_preprocessed/sub-oxfordOhba02/anat/sub-oxfordOhba02_space-other_T2w.json +++ b/derivatives/data_preprocessed/sub-oxfordOhba02/anat/sub-oxfordOhba02_space-other_T2w.json @@ -1,67 +1,80 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.259, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma", - "InstitutionName": "Warneford_Hospital", - "InstitutionalDepartmentName": "BE3597", - "InstitutionAddress": "Warneford_Lane_StreetNo_Oxford_District_GB_OX3_7JX", - "DeviceSerialNumber": "66093", - "StationName": "AWP66093", - "BodyPartExamined": "CSPINE", - "PatientPosition": "HFS", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "T2w", - "ProtocolName": "T2w", - "ScanningSequence": "SE", - "SequenceVariant": "SK_SP_OSP", - "ScanOptions": "PFP", - "SequenceName": "_spcR_100", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS3D", "DIS2D"], - "SeriesNumber": 3, - "AcquisitionTime": "10:17:7.975000", - "AcquisitionNumber": 1, - "SliceThickness": 0.8, - "SAR": 0.578657, - "EchoTime": 0.12, - "RepetitionTime": 1.5, - "FlipAngle": 120, - "PartialFourier": 1, - "BaseResolution": 320, - "ShimSetting": [ - 4952, - -11384, - -1600, - 67, - 40, - -1, - -5, - 13 ], - "TxRefAmp": 316.391, - "PhaseResolution": 1, - "PhaseOversampling": 0.8, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC5-7;NC1,2", - "CoilString": "HC5-7;NC1_2", - "PulseSequenceDetails": "%SiemensSeq%_tse_vfl", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 100, - "EchoTrainLength": 76, - "PhaseEncodingSteps": 422, - "AcquisitionMatrixPE": 320, - "ReconMatrixPE": 320, - "PixelBandwidth": 625, - "DwellTime": 2.5e-06, - "ImageOrientationPatientDICOM": [ - 3.5e-13, - 1, - 4.884e-12, - -0.0714974, - 4.897e-12, - -0.997441 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 123.259, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma", + "InstitutionName": "Warneford_Hospital", + "InstitutionalDepartmentName": "BE3597", + "InstitutionAddress": "Warneford_Lane_StreetNo_Oxford_District_GB_OX3_7JX", + "DeviceSerialNumber": "66093", + "StationName": "AWP66093", + "BodyPartExamined": "CSPINE", + "PatientPosition": "HFS", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "T2w", + "ProtocolName": "T2w", + "ScanningSequence": "SE", + "SequenceVariant": "SK_SP_OSP", + "ScanOptions": "PFP", + "SequenceName": "_spcR_100", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS3D", + "DIS2D" + ], + "SeriesNumber": 3, + "AcquisitionTime": "10:17:7.975000", + "AcquisitionNumber": 1, + "SliceThickness": 0.8, + "SAR": 0.578657, + "EchoTime": 0.12, + "RepetitionTime": 1.5, + "FlipAngle": 120, + "PartialFourier": 1, + "BaseResolution": 320, + "ShimSetting": [ + 4952, + -11384, + -1600, + 67, + 40, + -1, + -5, + 13 + ], + "TxRefAmp": 316.391, + "PhaseResolution": 1, + "PhaseOversampling": 0.8, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC5-7;NC1,2", + "CoilString": "HC5-7;NC1_2", + "PulseSequenceDetails": "%SiemensSeq%_tse_vfl", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "EchoTrainLength": 76, + "PhaseEncodingSteps": 422, + "AcquisitionMatrixPE": 320, + "ReconMatrixPE": 320, + "PixelBandwidth": 625, + "DwellTime": 2.5e-06, + "ImageOrientationPatientDICOM": [ + 3.5e-13, + 1, + 4.884e-12, + -0.0714974, + 4.897e-12, + -0.997441 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-oxfordOhba03/anat/sub-oxfordOhba03_flip-1_mt-on_space-other_MTS.json b/derivatives/data_preprocessed/sub-oxfordOhba03/anat/sub-oxfordOhba03_flip-1_mt-on_space-other_MTS.json index 6692cac2fb..f1297453bf 100644 --- a/derivatives/data_preprocessed/sub-oxfordOhba03/anat/sub-oxfordOhba03_flip-1_mt-on_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-oxfordOhba03/anat/sub-oxfordOhba03_flip-1_mt-on_space-other_MTS.json @@ -1,65 +1,75 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.259, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma", - "InstitutionName": "Warneford_Hospital", - "InstitutionalDepartmentName": "BE3597", - "InstitutionAddress": "Warneford_Lane_StreetNo_Oxford_District_GB_OX3_7JX", - "DeviceSerialNumber": "66093", - "StationName": "AWP66093", - "BodyPartExamined": "CSPINE", - "PatientPosition": "HFS", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-MT1", - "ProtocolName": "GRE-MT1", - "ScanningSequence": "GR", - "SequenceVariant": "MTC_SP", - "ScanOptions": "MT", - "SequenceName": "_fl3d1", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "DIS2D"], - "SeriesNumber": 5, - "AcquisitionTime": "12:36:52.957500", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SAR": 0.557318, - "EchoTime": 0.00313, - "RepetitionTime": 0.035, - "FlipAngle": 9, - "PartialFourier": 1, - "BaseResolution": 256, - "ShimSetting": [ - 4912, - -11685, - -1493, - -936, - 150, - 1343, - 178, - -296 ], - "TxRefAmp": 264.693, - "PhaseResolution": 1, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC7;NC1,2", - "CoilString": "HC7;NC1_2", - "PulseSequenceDetails": "%SiemensSeq%_gre", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 100, - "PhaseEncodingSteps": 255, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 256, - "PixelBandwidth": 260, - "DwellTime": 7.5e-06, - "ImageOrientationPatientDICOM": [ - 0.998197, - 0.00961088, - -0.0592449, - -1.31674e-08, - 0.987096, - 0.16013 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 123.259, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma", + "InstitutionName": "Warneford_Hospital", + "InstitutionalDepartmentName": "BE3597", + "InstitutionAddress": "Warneford_Lane_StreetNo_Oxford_District_GB_OX3_7JX", + "DeviceSerialNumber": "66093", + "StationName": "AWP66093", + "BodyPartExamined": "CSPINE", + "PatientPosition": "HFS", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-MT1", + "ProtocolName": "GRE-MT1", + "ScanningSequence": "GR", + "SequenceVariant": "MTC_SP", + "ScanOptions": "MT", + "SequenceName": "_fl3d1", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "DIS2D" + ], + "SeriesNumber": 5, + "AcquisitionTime": "12:36:52.957500", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SAR": 0.557318, + "EchoTime": 0.00313, + "RepetitionTime": 0.035, + "FlipAngle": 9, + "PartialFourier": 1, + "BaseResolution": 256, + "ShimSetting": [ + 4912, + -11685, + -1493, + -936, + 150, + 1343, + 178, + -296 + ], + "TxRefAmp": 264.693, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC7;NC1,2", + "CoilString": "HC7;NC1_2", + "PulseSequenceDetails": "%SiemensSeq%_gre", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 255, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "PixelBandwidth": 260, + "DwellTime": 7.5e-06, + "ImageOrientationPatientDICOM": [ + 0.998197, + 0.00961088, + -0.0592449, + -1.31674e-08, + 0.987096, + 0.16013 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-oxfordOhba03/anat/sub-oxfordOhba03_flip-2_mt-off_space-other_MTS.json b/derivatives/data_preprocessed/sub-oxfordOhba03/anat/sub-oxfordOhba03_flip-2_mt-off_space-other_MTS.json index 167c719f0d..42f93aa9a8 100644 --- a/derivatives/data_preprocessed/sub-oxfordOhba03/anat/sub-oxfordOhba03_flip-2_mt-off_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-oxfordOhba03/anat/sub-oxfordOhba03_flip-2_mt-off_space-other_MTS.json @@ -1,64 +1,74 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.259, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma", - "InstitutionName": "Warneford_Hospital", - "InstitutionalDepartmentName": "BE3597", - "InstitutionAddress": "Warneford_Lane_StreetNo_Oxford_District_GB_OX3_7JX", - "DeviceSerialNumber": "66093", - "StationName": "AWP66093", - "BodyPartExamined": "CSPINE", - "PatientPosition": "HFS", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-T1w", - "ProtocolName": "GRE-T1w", - "ScanningSequence": "GR", - "SequenceVariant": "SP", - "SequenceName": "_fl3d1", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "DIS2D"], - "SeriesNumber": 7, - "AcquisitionTime": "12:41:18.012500", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SAR": 0.0361348, - "EchoTime": 0.00313, - "RepetitionTime": 0.015, - "FlipAngle": 15, - "PartialFourier": 1, - "BaseResolution": 256, - "ShimSetting": [ - 4912, - -11685, - -1493, - -936, - 150, - 1343, - 178, - -296 ], - "TxRefAmp": 264.693, - "PhaseResolution": 1, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC7;NC1,2", - "CoilString": "HC7;NC1_2", - "PulseSequenceDetails": "%SiemensSeq%_gre", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 100, - "PhaseEncodingSteps": 255, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 256, - "PixelBandwidth": 260, - "DwellTime": 7.5e-06, - "ImageOrientationPatientDICOM": [ - 0.998197, - 0.00961088, - -0.0592449, - -1.31674e-08, - 0.987096, - 0.16013 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 123.259, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma", + "InstitutionName": "Warneford_Hospital", + "InstitutionalDepartmentName": "BE3597", + "InstitutionAddress": "Warneford_Lane_StreetNo_Oxford_District_GB_OX3_7JX", + "DeviceSerialNumber": "66093", + "StationName": "AWP66093", + "BodyPartExamined": "CSPINE", + "PatientPosition": "HFS", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-T1w", + "ProtocolName": "GRE-T1w", + "ScanningSequence": "GR", + "SequenceVariant": "SP", + "SequenceName": "_fl3d1", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "DIS2D" + ], + "SeriesNumber": 7, + "AcquisitionTime": "12:41:18.012500", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SAR": 0.0361348, + "EchoTime": 0.00313, + "RepetitionTime": 0.015, + "FlipAngle": 15, + "PartialFourier": 1, + "BaseResolution": 256, + "ShimSetting": [ + 4912, + -11685, + -1493, + -936, + 150, + 1343, + 178, + -296 + ], + "TxRefAmp": 264.693, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC7;NC1,2", + "CoilString": "HC7;NC1_2", + "PulseSequenceDetails": "%SiemensSeq%_gre", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 255, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "PixelBandwidth": 260, + "DwellTime": 7.5e-06, + "ImageOrientationPatientDICOM": [ + 0.998197, + 0.00961088, + -0.0592449, + -1.31674e-08, + 0.987096, + 0.16013 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-oxfordOhba03/anat/sub-oxfordOhba03_space-other_T1w.json b/derivatives/data_preprocessed/sub-oxfordOhba03/anat/sub-oxfordOhba03_space-other_T1w.json index a1ea6c8f2c..cdda48407a 100644 --- a/derivatives/data_preprocessed/sub-oxfordOhba03/anat/sub-oxfordOhba03_space-other_T1w.json +++ b/derivatives/data_preprocessed/sub-oxfordOhba03/anat/sub-oxfordOhba03_space-other_T1w.json @@ -1,66 +1,79 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.26, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma", - "InstitutionName": "Warneford_Hospital", - "InstitutionalDepartmentName": "BE3597", - "InstitutionAddress": "Warneford_Lane_StreetNo_Oxford_District_GB_OX3_7JX", - "DeviceSerialNumber": "66093", - "StationName": "AWP66093", - "BodyPartExamined": "CSPINE", - "PatientPosition": "HFS", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "T1w", - "ProtocolName": "T1w", - "ScanningSequence": "GR_IR", - "SequenceVariant": "SK_SP_MP", - "ScanOptions": "IR", - "SequenceName": "_tfl3d1_16", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS3D", "DIS2D"], - "SeriesNumber": 2, - "AcquisitionTime": "12:23:53.205000", - "AcquisitionNumber": 1, - "SliceThickness": 1, - "SAR": 0.0593814, - "EchoTime": 0.00372, - "RepetitionTime": 2, - "InversionTime": 1, - "FlipAngle": 9, - "PartialFourier": 1, - "BaseResolution": 320, - "ShimSetting": [ - 4952, - -11384, - -1600, - 67, - 40, - -1, - -5, - 13 ], - "TxRefAmp": 241.511, - "PhaseResolution": 1, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC1-7;NC1,2", - "CoilString": "HC1-7;NC1_2", - "PulseSequenceDetails": "%SiemensSeq%_tfl", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 81.25, - "PhaseEncodingSteps": 259, - "AcquisitionMatrixPE": 260, - "ReconMatrixPE": 320, - "PixelBandwidth": 150, - "DwellTime": 1.04e-05, - "ImageOrientationPatientDICOM": [ - 0, - 1, - 0, - -0.140901, - 0, - -0.990024 ], - "InPlanePhaseEncodingDirectionDICOM": "ROW", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 123.26, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma", + "InstitutionName": "Warneford_Hospital", + "InstitutionalDepartmentName": "BE3597", + "InstitutionAddress": "Warneford_Lane_StreetNo_Oxford_District_GB_OX3_7JX", + "DeviceSerialNumber": "66093", + "StationName": "AWP66093", + "BodyPartExamined": "CSPINE", + "PatientPosition": "HFS", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "T1w", + "ProtocolName": "T1w", + "ScanningSequence": "GR_IR", + "SequenceVariant": "SK_SP_MP", + "ScanOptions": "IR", + "SequenceName": "_tfl3d1_16", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS3D", + "DIS2D" + ], + "SeriesNumber": 2, + "AcquisitionTime": "12:23:53.205000", + "AcquisitionNumber": 1, + "SliceThickness": 1, + "SAR": 0.0593814, + "EchoTime": 0.00372, + "RepetitionTime": 2, + "InversionTime": 1, + "FlipAngle": 9, + "PartialFourier": 1, + "BaseResolution": 320, + "ShimSetting": [ + 4952, + -11384, + -1600, + 67, + 40, + -1, + -5, + 13 + ], + "TxRefAmp": 241.511, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC1-7;NC1,2", + "CoilString": "HC1-7;NC1_2", + "PulseSequenceDetails": "%SiemensSeq%_tfl", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 81.25, + "PhaseEncodingSteps": 259, + "AcquisitionMatrixPE": 260, + "ReconMatrixPE": 320, + "PixelBandwidth": 150, + "DwellTime": 1.04e-05, + "ImageOrientationPatientDICOM": [ + 0, + 1, + 0, + -0.140901, + 0, + -0.990024 + ], + "InPlanePhaseEncodingDirectionDICOM": "ROW", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-oxfordOhba03/anat/sub-oxfordOhba03_space-other_T2star.json b/derivatives/data_preprocessed/sub-oxfordOhba03/anat/sub-oxfordOhba03_space-other_T2star.json index 4e182ab0e8..dc9af5e1c0 100644 --- a/derivatives/data_preprocessed/sub-oxfordOhba03/anat/sub-oxfordOhba03_space-other_T2star.json +++ b/derivatives/data_preprocessed/sub-oxfordOhba03/anat/sub-oxfordOhba03_space-other_T2star.json @@ -74,5 +74,9 @@ "InPlanePhaseEncodingDirectionDICOM": "COL", "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0", - "AcquisitionDuration": 285.0 + "AcquisitionDuration": 285.0, + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-oxfordOhba03/anat/sub-oxfordOhba03_space-other_T2w.json b/derivatives/data_preprocessed/sub-oxfordOhba03/anat/sub-oxfordOhba03_space-other_T2w.json index fae2fa5daf..721f03cd81 100644 --- a/derivatives/data_preprocessed/sub-oxfordOhba03/anat/sub-oxfordOhba03_space-other_T2w.json +++ b/derivatives/data_preprocessed/sub-oxfordOhba03/anat/sub-oxfordOhba03_space-other_T2w.json @@ -1,67 +1,80 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.26, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma", - "InstitutionName": "Warneford_Hospital", - "InstitutionalDepartmentName": "BE3597", - "InstitutionAddress": "Warneford_Lane_StreetNo_Oxford_District_GB_OX3_7JX", - "DeviceSerialNumber": "66093", - "StationName": "AWP66093", - "BodyPartExamined": "CSPINE", - "PatientPosition": "HFS", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "T2w", - "ProtocolName": "T2w", - "ScanningSequence": "SE", - "SequenceVariant": "SK_SP_OSP", - "ScanOptions": "PFP", - "SequenceName": "_spcR_100", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS3D", "DIS2D"], - "SeriesNumber": 3, - "AcquisitionTime": "12:28:59.030000", - "AcquisitionNumber": 1, - "SliceThickness": 0.8, - "SAR": 0.563484, - "EchoTime": 0.12, - "RepetitionTime": 1.5, - "FlipAngle": 120, - "PartialFourier": 1, - "BaseResolution": 320, - "ShimSetting": [ - 4952, - -11384, - -1600, - 67, - 40, - -1, - -5, - 13 ], - "TxRefAmp": 264.693, - "PhaseResolution": 1, - "PhaseOversampling": 0.8, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC5-7;NC1,2", - "CoilString": "HC5-7;NC1_2", - "PulseSequenceDetails": "%SiemensSeq%_tse_vfl", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 100, - "EchoTrainLength": 76, - "PhaseEncodingSteps": 422, - "AcquisitionMatrixPE": 320, - "ReconMatrixPE": 320, - "PixelBandwidth": 625, - "DwellTime": 2.5e-06, - "ImageOrientationPatientDICOM": [ - 4.69e-13, - 1, - 4.874e-12, - -0.0958457, - 4.897e-12, - -0.995396 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 123.26, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma", + "InstitutionName": "Warneford_Hospital", + "InstitutionalDepartmentName": "BE3597", + "InstitutionAddress": "Warneford_Lane_StreetNo_Oxford_District_GB_OX3_7JX", + "DeviceSerialNumber": "66093", + "StationName": "AWP66093", + "BodyPartExamined": "CSPINE", + "PatientPosition": "HFS", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "T2w", + "ProtocolName": "T2w", + "ScanningSequence": "SE", + "SequenceVariant": "SK_SP_OSP", + "ScanOptions": "PFP", + "SequenceName": "_spcR_100", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS3D", + "DIS2D" + ], + "SeriesNumber": 3, + "AcquisitionTime": "12:28:59.030000", + "AcquisitionNumber": 1, + "SliceThickness": 0.8, + "SAR": 0.563484, + "EchoTime": 0.12, + "RepetitionTime": 1.5, + "FlipAngle": 120, + "PartialFourier": 1, + "BaseResolution": 320, + "ShimSetting": [ + 4952, + -11384, + -1600, + 67, + 40, + -1, + -5, + 13 + ], + "TxRefAmp": 264.693, + "PhaseResolution": 1, + "PhaseOversampling": 0.8, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC5-7;NC1,2", + "CoilString": "HC5-7;NC1_2", + "PulseSequenceDetails": "%SiemensSeq%_tse_vfl", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "EchoTrainLength": 76, + 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-11468, - -1558, - -1590, - -189, - 2521, - 23, - 74 ], - "TxRefAmp": 293.67, - "PhaseResolution": 1, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC7;NC1,2", - "CoilString": "HC7;NC1_2", - "PulseSequenceDetails": "%SiemensSeq%_gre", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 100, - "PhaseEncodingSteps": 255, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 256, - "PixelBandwidth": 260, - "DwellTime": 7.5e-06, - "ImageOrientationPatientDICOM": [ - 0.998906, - -0.000495428, - 0.0467519, - 7.66356e-08, - 0.999944, - 0.0105947 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 123.259, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma", + "InstitutionName": "Warneford_Hospital", + "InstitutionalDepartmentName": "BE3597", + "InstitutionAddress": "Warneford_Lane_StreetNo_Oxford_District_GB_OX3_7JX", + "DeviceSerialNumber": "66093", + "StationName": "AWP66093", + "BodyPartExamined": "HEAD", + "PatientPosition": "HFS", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-MT1", + "ProtocolName": "GRE-MT1", + "ScanningSequence": "GR", + "SequenceVariant": "MTC_SP", + "ScanOptions": "MT", + "SequenceName": "_fl3d1", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "DIS2D" + ], + "SeriesNumber": 5, + "AcquisitionTime": "14:29:42.982500", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SAR": 0.554014, + "EchoTime": 0.00313, + "RepetitionTime": 0.035, + "FlipAngle": 9, + "PartialFourier": 1, + "BaseResolution": 256, + "ShimSetting": [ + 4876, + -11468, + -1558, + -1590, + -189, + 2521, + 23, + 74 + ], + "TxRefAmp": 293.67, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC7;NC1,2", + "CoilString": "HC7;NC1_2", + "PulseSequenceDetails": "%SiemensSeq%_gre", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 255, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "PixelBandwidth": 260, + "DwellTime": 7.5e-06, + "ImageOrientationPatientDICOM": [ + 0.998906, + -0.000495428, + 0.0467519, + 7.66356e-08, + 0.999944, + 0.0105947 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-oxfordOhba04/anat/sub-oxfordOhba04_flip-2_mt-off_space-other_MTS.json b/derivatives/data_preprocessed/sub-oxfordOhba04/anat/sub-oxfordOhba04_flip-2_mt-off_space-other_MTS.json index 7dde5ce68a..299b51089b 100644 --- a/derivatives/data_preprocessed/sub-oxfordOhba04/anat/sub-oxfordOhba04_flip-2_mt-off_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-oxfordOhba04/anat/sub-oxfordOhba04_flip-2_mt-off_space-other_MTS.json @@ -1,64 +1,74 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.259, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma", - "InstitutionName": "Warneford_Hospital", - "InstitutionalDepartmentName": "BE3597", - "InstitutionAddress": "Warneford_Lane_StreetNo_Oxford_District_GB_OX3_7JX", - "DeviceSerialNumber": "66093", - "StationName": "AWP66093", - "BodyPartExamined": "HEAD", - "PatientPosition": "HFS", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-T1w", - "ProtocolName": "GRE-T1w", - "ScanningSequence": "GR", - "SequenceVariant": "SP", - "SequenceName": "_fl3d1", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "DIS2D"], - "SeriesNumber": 7, - "AcquisitionTime": "14:34:9.000000", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SAR": 0.0359206, - "EchoTime": 0.00313, - "RepetitionTime": 0.015, - "FlipAngle": 15, - "PartialFourier": 1, - "BaseResolution": 256, - "ShimSetting": [ - 4876, - -11468, - -1558, - -1590, - -189, - 2521, - 23, - 74 ], - "TxRefAmp": 293.67, - "PhaseResolution": 1, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC7;NC1,2", - "CoilString": "HC7;NC1_2", - "PulseSequenceDetails": "%SiemensSeq%_gre", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 100, - "PhaseEncodingSteps": 255, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 256, - "PixelBandwidth": 260, - "DwellTime": 7.5e-06, - "ImageOrientationPatientDICOM": [ - 0.998906, - -0.000495428, - 0.0467519, - 7.66356e-08, - 0.999944, - 0.0105947 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 123.259, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma", + "InstitutionName": "Warneford_Hospital", + "InstitutionalDepartmentName": "BE3597", + "InstitutionAddress": "Warneford_Lane_StreetNo_Oxford_District_GB_OX3_7JX", + "DeviceSerialNumber": "66093", + "StationName": "AWP66093", + "BodyPartExamined": "HEAD", + "PatientPosition": "HFS", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-T1w", + "ProtocolName": "GRE-T1w", + "ScanningSequence": "GR", + "SequenceVariant": "SP", + "SequenceName": "_fl3d1", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "DIS2D" + ], + "SeriesNumber": 7, + "AcquisitionTime": "14:34:9.000000", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SAR": 0.0359206, + "EchoTime": 0.00313, + "RepetitionTime": 0.015, + "FlipAngle": 15, + "PartialFourier": 1, + "BaseResolution": 256, + "ShimSetting": [ + 4876, + -11468, + -1558, + -1590, + -189, + 2521, + 23, + 74 + ], + "TxRefAmp": 293.67, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC7;NC1,2", + "CoilString": "HC7;NC1_2", + "PulseSequenceDetails": "%SiemensSeq%_gre", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 255, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "PixelBandwidth": 260, + "DwellTime": 7.5e-06, + "ImageOrientationPatientDICOM": [ + 0.998906, + -0.000495428, + 0.0467519, + 7.66356e-08, + 0.999944, + 0.0105947 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-oxfordOhba04/anat/sub-oxfordOhba04_space-other_T1w.json b/derivatives/data_preprocessed/sub-oxfordOhba04/anat/sub-oxfordOhba04_space-other_T1w.json index be3465d433..9541043a7e 100644 --- a/derivatives/data_preprocessed/sub-oxfordOhba04/anat/sub-oxfordOhba04_space-other_T1w.json +++ b/derivatives/data_preprocessed/sub-oxfordOhba04/anat/sub-oxfordOhba04_space-other_T1w.json @@ -1,66 +1,79 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.26, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma", - "InstitutionName": "Warneford_Hospital", - "InstitutionalDepartmentName": "BE3597", - "InstitutionAddress": "Warneford_Lane_StreetNo_Oxford_District_GB_OX3_7JX", - "DeviceSerialNumber": "66093", - "StationName": "AWP66093", - "BodyPartExamined": "HEAD", - "PatientPosition": "HFS", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "T1w", - "ProtocolName": "T1w", - "ScanningSequence": "GR_IR", - "SequenceVariant": "SK_SP_MP", - "ScanOptions": "IR", - "SequenceName": "_tfl3d1_16", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS3D", "DIS2D"], - "SeriesNumber": 2, - "AcquisitionTime": "14:16:49.220000", - "AcquisitionNumber": 1, - "SliceThickness": 1, - "SAR": 0.0597219, - "EchoTime": 0.00372, - "RepetitionTime": 2, - "InversionTime": 1, - "FlipAngle": 9, - "PartialFourier": 1, - "BaseResolution": 320, - "ShimSetting": [ - 4952, - -11384, - -1600, - 67, - 40, - -1, - -5, - 13 ], - "TxRefAmp": 267.422, - "PhaseResolution": 1, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC1-7;NC1,2", - "CoilString": "HC1-7;NC1_2", - "PulseSequenceDetails": "%SiemensSeq%_tfl", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 81.25, - "PhaseEncodingSteps": 259, - "AcquisitionMatrixPE": 260, - "ReconMatrixPE": 320, - "PixelBandwidth": 150, - "DwellTime": 1.04e-05, - "ImageOrientationPatientDICOM": [ - 0, - 1, - 0, - 0.045363, - 0, - -0.998971 ], - "InPlanePhaseEncodingDirectionDICOM": "ROW", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 123.26, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma", + "InstitutionName": "Warneford_Hospital", + "InstitutionalDepartmentName": "BE3597", + "InstitutionAddress": "Warneford_Lane_StreetNo_Oxford_District_GB_OX3_7JX", + "DeviceSerialNumber": "66093", + "StationName": "AWP66093", + "BodyPartExamined": "HEAD", + "PatientPosition": "HFS", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "T1w", + "ProtocolName": "T1w", + "ScanningSequence": "GR_IR", + "SequenceVariant": "SK_SP_MP", + "ScanOptions": "IR", + "SequenceName": "_tfl3d1_16", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS3D", + "DIS2D" + ], + "SeriesNumber": 2, + "AcquisitionTime": "14:16:49.220000", + "AcquisitionNumber": 1, + "SliceThickness": 1, + "SAR": 0.0597219, + "EchoTime": 0.00372, + "RepetitionTime": 2, + "InversionTime": 1, + "FlipAngle": 9, + "PartialFourier": 1, + "BaseResolution": 320, + "ShimSetting": [ + 4952, + -11384, + -1600, + 67, + 40, + -1, + -5, + 13 + ], + "TxRefAmp": 267.422, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC1-7;NC1,2", + "CoilString": "HC1-7;NC1_2", + "PulseSequenceDetails": "%SiemensSeq%_tfl", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 81.25, + "PhaseEncodingSteps": 259, + "AcquisitionMatrixPE": 260, + "ReconMatrixPE": 320, + "PixelBandwidth": 150, + "DwellTime": 1.04e-05, + "ImageOrientationPatientDICOM": [ + 0, + 1, + 0, + 0.045363, + 0, + -0.998971 + ], + "InPlanePhaseEncodingDirectionDICOM": "ROW", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-oxfordOhba04/anat/sub-oxfordOhba04_space-other_T2star.json b/derivatives/data_preprocessed/sub-oxfordOhba04/anat/sub-oxfordOhba04_space-other_T2star.json index b453ccc87e..e2cfd17997 100644 --- a/derivatives/data_preprocessed/sub-oxfordOhba04/anat/sub-oxfordOhba04_space-other_T2star.json +++ b/derivatives/data_preprocessed/sub-oxfordOhba04/anat/sub-oxfordOhba04_space-other_T2star.json @@ -74,5 +74,9 @@ "InPlanePhaseEncodingDirectionDICOM": "COL", "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0", - "AcquisitionDuration": 285.0 + "AcquisitionDuration": 285.0, + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-oxfordOhba04/anat/sub-oxfordOhba04_space-other_T2w.json b/derivatives/data_preprocessed/sub-oxfordOhba04/anat/sub-oxfordOhba04_space-other_T2w.json index 3adaf0e3d6..5363f249ae 100644 --- a/derivatives/data_preprocessed/sub-oxfordOhba04/anat/sub-oxfordOhba04_space-other_T2w.json +++ b/derivatives/data_preprocessed/sub-oxfordOhba04/anat/sub-oxfordOhba04_space-other_T2w.json @@ -1,67 +1,80 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.26, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma", - "InstitutionName": "Warneford_Hospital", - "InstitutionalDepartmentName": "BE3597", - "InstitutionAddress": "Warneford_Lane_StreetNo_Oxford_District_GB_OX3_7JX", - "DeviceSerialNumber": "66093", - "StationName": "AWP66093", - "BodyPartExamined": "HEAD", - "PatientPosition": "HFS", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "T2w", - "ProtocolName": "T2w", - "ScanningSequence": "SE", - "SequenceVariant": "SK_SP_OSP", - "ScanOptions": "PFP", - "SequenceName": "_spcR_100", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS3D", "DIS2D"], - "SeriesNumber": 3, - "AcquisitionTime": "14:21:58.127500", - "AcquisitionNumber": 1, - "SliceThickness": 0.8, - "SAR": 0.560143, - "EchoTime": 0.12, - "RepetitionTime": 1.5, - "FlipAngle": 120, - "PartialFourier": 1, - "BaseResolution": 320, - 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"InstitutionalDepartmentName": "BE3597", + "InstitutionAddress": "Warneford_Lane_StreetNo_Oxford_District_GB_OX3_7JX", + "DeviceSerialNumber": "66093", + "StationName": "AWP66093", + "BodyPartExamined": "HEAD", + "PatientPosition": "HFS", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "T2w", + "ProtocolName": "T2w", + "ScanningSequence": "SE", + "SequenceVariant": "SK_SP_OSP", + "ScanOptions": "PFP", + "SequenceName": "_spcR_100", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS3D", + "DIS2D" + ], + "SeriesNumber": 3, + "AcquisitionTime": "14:21:58.127500", + "AcquisitionNumber": 1, + "SliceThickness": 0.8, + "SAR": 0.560143, + "EchoTime": 0.12, + "RepetitionTime": 1.5, + "FlipAngle": 120, + "PartialFourier": 1, + "BaseResolution": 320, + "ShimSetting": [ + 4952, + -11384, + -1600, + 67, + 40, + -1, + -5, + 13 + ], + "TxRefAmp": 293.67, + "PhaseResolution": 1, + "PhaseOversampling": 0.8, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC5-7;NC1,2", + "CoilString": "HC5-7;NC1_2", + "PulseSequenceDetails": "%SiemensSeq%_tse_vfl", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "EchoTrainLength": 76, + "PhaseEncodingSteps": 422, + "AcquisitionMatrixPE": 320, + "ReconMatrixPE": 320, + "PixelBandwidth": 625, + "DwellTime": 2.5e-06, + "ImageOrientationPatientDICOM": [ + -2.14e-13, + 1, + 4.892e-12, + 0.0436194, + 4.897e-12, + -0.999048 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-oxfordOhba05/anat/sub-oxfordOhba05_flip-1_mt-on_space-other_MTS.json b/derivatives/data_preprocessed/sub-oxfordOhba05/anat/sub-oxfordOhba05_flip-1_mt-on_space-other_MTS.json index c3568258ce..5a5012c32d 100644 --- a/derivatives/data_preprocessed/sub-oxfordOhba05/anat/sub-oxfordOhba05_flip-1_mt-on_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-oxfordOhba05/anat/sub-oxfordOhba05_flip-1_mt-on_space-other_MTS.json @@ -1,65 +1,75 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.259, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma", - "InstitutionName": "Warneford_Hospital", - "InstitutionalDepartmentName": "BE3597", - "InstitutionAddress": "Warneford_Lane_StreetNo_Oxford_District_GB_OX3_7JX", - "DeviceSerialNumber": "66093", - "StationName": "AWP66093", - "BodyPartExamined": "CSPINE", - "PatientPosition": "HFS", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-MT1", - "ProtocolName": "GRE-MT1", - "ScanningSequence": "GR", - "SequenceVariant": "MTC_SP", - "ScanOptions": "MT", - "SequenceName": "_fl3d1", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "DIS2D"], - "SeriesNumber": 6, - 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+ "MagneticFieldStrength": 3, + "ImagingFrequency": 123.259, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma", + "InstitutionName": "Warneford_Hospital", + "InstitutionalDepartmentName": "BE3597", + "InstitutionAddress": "Warneford_Lane_StreetNo_Oxford_District_GB_OX3_7JX", + "DeviceSerialNumber": "66093", + "StationName": "AWP66093", + "BodyPartExamined": "CSPINE", + "PatientPosition": "HFS", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-MT1", + "ProtocolName": "GRE-MT1", + "ScanningSequence": "GR", + "SequenceVariant": "MTC_SP", + "ScanOptions": "MT", + "SequenceName": "_fl3d1", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "DIS2D" + ], + "SeriesNumber": 6, + "AcquisitionTime": "16:21:26.965000", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SAR": 0.495715, + "EchoTime": 0.00313, + "RepetitionTime": 0.035, + "FlipAngle": 9, + "PartialFourier": 1, + "BaseResolution": 256, + "ShimSetting": [ + 4954, + -11537, + -1575, + -1456, + 117, + 1540, + -75, + 1 + ], + "TxRefAmp": 290.977, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC7;NC1,2", + "CoilString": "HC7;NC1_2", + "PulseSequenceDetails": "%SiemensSeq%_gre", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 255, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "PixelBandwidth": 260, + "DwellTime": 7.5e-06, + "ImageOrientationPatientDICOM": [ + 0.999942, + -0.000244227, + -0.0108113, + 3.65653e-08, + 0.999745, + -0.0225808 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-oxfordOhba05/anat/sub-oxfordOhba05_flip-2_mt-off_space-other_MTS.json b/derivatives/data_preprocessed/sub-oxfordOhba05/anat/sub-oxfordOhba05_flip-2_mt-off_space-other_MTS.json index 81ba010ff1..f2602475e4 100644 --- a/derivatives/data_preprocessed/sub-oxfordOhba05/anat/sub-oxfordOhba05_flip-2_mt-off_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-oxfordOhba05/anat/sub-oxfordOhba05_flip-2_mt-off_space-other_MTS.json @@ -1,64 +1,74 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.259, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma", - "InstitutionName": "Warneford_Hospital", - "InstitutionalDepartmentName": "BE3597", - "InstitutionAddress": "Warneford_Lane_StreetNo_Oxford_District_GB_OX3_7JX", - "DeviceSerialNumber": "66093", - "StationName": "AWP66093", - "BodyPartExamined": "CSPINE", - "PatientPosition": "HFS", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-T1w", - "ProtocolName": "GRE-T1w", - "ScanningSequence": "GR", - "SequenceVariant": "SP", - "SequenceName": "_fl3d1", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "DIS2D"], - "SeriesNumber": 8, - "AcquisitionTime": "16:25:52.957500", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SAR": 0.0321407, - "EchoTime": 0.00313, - "RepetitionTime": 0.015, - "FlipAngle": 15, - "PartialFourier": 1, - "BaseResolution": 256, - "ShimSetting": [ - 4954, - -11537, - -1575, - -1456, - 117, - 1540, - -75, - 1 ], - "TxRefAmp": 290.977, - "PhaseResolution": 1, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC7;NC1,2", - "CoilString": "HC7;NC1_2", - "PulseSequenceDetails": "%SiemensSeq%_gre", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 100, - "PhaseEncodingSteps": 255, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 256, - "PixelBandwidth": 260, - "DwellTime": 7.5e-06, - "ImageOrientationPatientDICOM": [ - 0.999942, - -0.000244227, - -0.0108113, - 3.65653e-08, - 0.999745, - -0.0225808 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 123.259, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma", + "InstitutionName": "Warneford_Hospital", + "InstitutionalDepartmentName": "BE3597", + "InstitutionAddress": "Warneford_Lane_StreetNo_Oxford_District_GB_OX3_7JX", + "DeviceSerialNumber": "66093", + "StationName": "AWP66093", + "BodyPartExamined": "CSPINE", + "PatientPosition": "HFS", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-T1w", + "ProtocolName": "GRE-T1w", + "ScanningSequence": "GR", + "SequenceVariant": "SP", + "SequenceName": "_fl3d1", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "DIS2D" + ], + "SeriesNumber": 8, + "AcquisitionTime": "16:25:52.957500", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SAR": 0.0321407, + "EchoTime": 0.00313, + "RepetitionTime": 0.015, + "FlipAngle": 15, + "PartialFourier": 1, + "BaseResolution": 256, + "ShimSetting": [ + 4954, + -11537, + -1575, + -1456, + 117, + 1540, + -75, + 1 + ], + "TxRefAmp": 290.977, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC7;NC1,2", + "CoilString": "HC7;NC1_2", + "PulseSequenceDetails": "%SiemensSeq%_gre", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 255, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "PixelBandwidth": 260, + "DwellTime": 7.5e-06, + "ImageOrientationPatientDICOM": [ + 0.999942, + -0.000244227, + -0.0108113, + 3.65653e-08, + 0.999745, + -0.0225808 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-oxfordOhba05/anat/sub-oxfordOhba05_space-other_T1w.json b/derivatives/data_preprocessed/sub-oxfordOhba05/anat/sub-oxfordOhba05_space-other_T1w.json index cfe4833a4e..d22588d97e 100644 --- a/derivatives/data_preprocessed/sub-oxfordOhba05/anat/sub-oxfordOhba05_space-other_T1w.json +++ b/derivatives/data_preprocessed/sub-oxfordOhba05/anat/sub-oxfordOhba05_space-other_T1w.json @@ -1,66 +1,79 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.26, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma", - "InstitutionName": "Warneford_Hospital", - "InstitutionalDepartmentName": "BE3597", - "InstitutionAddress": "Warneford_Lane_StreetNo_Oxford_District_GB_OX3_7JX", - "DeviceSerialNumber": "66093", - "StationName": "AWP66093", - "BodyPartExamined": "CSPINE", - "PatientPosition": "HFS", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "T1w", - "ProtocolName": "T1w", - "ScanningSequence": "GR_IR", - "SequenceVariant": "SK_SP_MP", - "ScanOptions": "IR", - "SequenceName": "_tfl3d1_16", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS3D", "DIS2D"], - "SeriesNumber": 3, - "AcquisitionTime": "16:07:51.177500", - "AcquisitionNumber": 1, - "SliceThickness": 1, - "SAR": 0.053311, - "EchoTime": 0.00372, - "RepetitionTime": 2, - "InversionTime": 1, - "FlipAngle": 9, - "PartialFourier": 1, - "BaseResolution": 320, - "ShimSetting": [ - 4952, - -11384, - -1600, - 67, - 40, - -1, - -5, - 13 ], - "TxRefAmp": 265.418, - "PhaseResolution": 1, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC1-7;NC1,2", - "CoilString": "HC1-7;NC1_2", - "PulseSequenceDetails": "%SiemensSeq%_tfl", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 81.25, - "PhaseEncodingSteps": 259, - "AcquisitionMatrixPE": 260, - "ReconMatrixPE": 320, - "PixelBandwidth": 150, - "DwellTime": 1.04e-05, - "ImageOrientationPatientDICOM": [ - 0, - 1, - 0, - -0.00698133, - 0, - -0.999976 ], - "InPlanePhaseEncodingDirectionDICOM": "ROW", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 123.26, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma", + "InstitutionName": "Warneford_Hospital", + "InstitutionalDepartmentName": "BE3597", + "InstitutionAddress": "Warneford_Lane_StreetNo_Oxford_District_GB_OX3_7JX", + "DeviceSerialNumber": "66093", + "StationName": "AWP66093", + "BodyPartExamined": "CSPINE", + "PatientPosition": "HFS", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "T1w", + "ProtocolName": "T1w", + "ScanningSequence": "GR_IR", + "SequenceVariant": "SK_SP_MP", + "ScanOptions": "IR", + "SequenceName": "_tfl3d1_16", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS3D", + "DIS2D" + ], + "SeriesNumber": 3, + "AcquisitionTime": "16:07:51.177500", + "AcquisitionNumber": 1, + "SliceThickness": 1, + "SAR": 0.053311, + "EchoTime": 0.00372, + "RepetitionTime": 2, + "InversionTime": 1, + "FlipAngle": 9, + "PartialFourier": 1, + "BaseResolution": 320, + "ShimSetting": [ + 4952, + -11384, + -1600, + 67, + 40, + -1, + -5, + 13 + ], + "TxRefAmp": 265.418, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC1-7;NC1,2", + "CoilString": "HC1-7;NC1_2", + "PulseSequenceDetails": "%SiemensSeq%_tfl", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 81.25, + "PhaseEncodingSteps": 259, + "AcquisitionMatrixPE": 260, + "ReconMatrixPE": 320, + "PixelBandwidth": 150, + "DwellTime": 1.04e-05, + "ImageOrientationPatientDICOM": [ + 0, + 1, + 0, + -0.00698133, + 0, + -0.999976 + ], + "InPlanePhaseEncodingDirectionDICOM": "ROW", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-oxfordOhba05/anat/sub-oxfordOhba05_space-other_T2star.json b/derivatives/data_preprocessed/sub-oxfordOhba05/anat/sub-oxfordOhba05_space-other_T2star.json index 938f5fcdc8..228ca91281 100644 --- a/derivatives/data_preprocessed/sub-oxfordOhba05/anat/sub-oxfordOhba05_space-other_T2star.json +++ b/derivatives/data_preprocessed/sub-oxfordOhba05/anat/sub-oxfordOhba05_space-other_T2star.json @@ -74,5 +74,9 @@ "InPlanePhaseEncodingDirectionDICOM": "COL", "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0", - "AcquisitionDuration": 285.0 + "AcquisitionDuration": 285.0, + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-oxfordOhba05/anat/sub-oxfordOhba05_space-other_T2w.json b/derivatives/data_preprocessed/sub-oxfordOhba05/anat/sub-oxfordOhba05_space-other_T2w.json index 4fb03ceea4..121606faa9 100644 --- a/derivatives/data_preprocessed/sub-oxfordOhba05/anat/sub-oxfordOhba05_space-other_T2w.json +++ b/derivatives/data_preprocessed/sub-oxfordOhba05/anat/sub-oxfordOhba05_space-other_T2w.json @@ -1,67 +1,80 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.26, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma", - "InstitutionName": "Warneford_Hospital", - "InstitutionalDepartmentName": "BE3597", - "InstitutionAddress": "Warneford_Lane_StreetNo_Oxford_District_GB_OX3_7JX", - "DeviceSerialNumber": "66093", - "StationName": "AWP66093", - "BodyPartExamined": "CSPINE", - "PatientPosition": "HFS", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "T2w", - "ProtocolName": "T2w", - "ScanningSequence": "SE", - "SequenceVariant": "SK_SP_OSP", - "ScanOptions": "PFP", - "SequenceName": "_spcR_100", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS3D", "DIS2D"], - "SeriesNumber": 4, - "AcquisitionTime": "16:12:57.092500", - "AcquisitionNumber": 1, - "SliceThickness": 0.8, - "SAR": 0.5012, - "EchoTime": 0.12, - "RepetitionTime": 1.5, - "FlipAngle": 120, - "PartialFourier": 1, - "BaseResolution": 320, - "ShimSetting": [ - 4952, - -11384, - -1600, - 67, - 40, - -1, - -5, - 13 ], - "TxRefAmp": 290.977, - "PhaseResolution": 1, - "PhaseOversampling": 0.8, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC5-7;NC1,2", - "CoilString": "HC5-7;NC1_2", - "PulseSequenceDetails": "%SiemensSeq%_tse_vfl", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 100, - "EchoTrainLength": 76, - "PhaseEncodingSteps": 422, - "AcquisitionMatrixPE": 320, - "ReconMatrixPE": 320, - "PixelBandwidth": 625, - "DwellTime": 2.5e-06, - "ImageOrientationPatientDICOM": [ - 8.5e-14, - 1, - 4.896e-12, - -0.0174524, - 4.897e-12, - -0.999848 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 123.26, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma", + "InstitutionName": "Warneford_Hospital", + "InstitutionalDepartmentName": "BE3597", + "InstitutionAddress": "Warneford_Lane_StreetNo_Oxford_District_GB_OX3_7JX", + "DeviceSerialNumber": "66093", + "StationName": "AWP66093", + "BodyPartExamined": "CSPINE", + "PatientPosition": "HFS", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "T2w", + "ProtocolName": "T2w", + "ScanningSequence": "SE", + "SequenceVariant": "SK_SP_OSP", + "ScanOptions": "PFP", + "SequenceName": "_spcR_100", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS3D", + "DIS2D" + ], + "SeriesNumber": 4, + "AcquisitionTime": "16:12:57.092500", + "AcquisitionNumber": 1, + "SliceThickness": 0.8, + "SAR": 0.5012, + "EchoTime": 0.12, + "RepetitionTime": 1.5, + "FlipAngle": 120, + "PartialFourier": 1, + "BaseResolution": 320, + "ShimSetting": [ + 4952, + -11384, + -1600, + 67, + 40, + -1, + -5, + 13 + ], + "TxRefAmp": 290.977, + "PhaseResolution": 1, + "PhaseOversampling": 0.8, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC5-7;NC1,2", + "CoilString": "HC5-7;NC1_2", + "PulseSequenceDetails": "%SiemensSeq%_tse_vfl", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "EchoTrainLength": 76, + "PhaseEncodingSteps": 422, + "AcquisitionMatrixPE": 320, + "ReconMatrixPE": 320, + "PixelBandwidth": 625, + "DwellTime": 2.5e-06, + "ImageOrientationPatientDICOM": [ + 8.5e-14, + 1, + 4.896e-12, + -0.0174524, + 4.897e-12, + -0.999848 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-pavia01/anat/sub-pavia01_flip-1_mt-on_space-other_MTS.json b/derivatives/data_preprocessed/sub-pavia01/anat/sub-pavia01_flip-1_mt-on_space-other_MTS.json index 2204e99458..c3bc1f1021 100644 --- a/derivatives/data_preprocessed/sub-pavia01/anat/sub-pavia01_flip-1_mt-on_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-pavia01/anat/sub-pavia01_flip-1_mt-on_space-other_MTS.json @@ -1,75 +1,78 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.228, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Skyra", - "InstitutionName": "Istituto_Neurologico_Mondino", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "Via_Mondino_2_Pavia_District_IT_27100", - "DeviceSerialNumber": "45358", - "StationName": "AWP45358", - "BodyPartExamined": "HEAD", - "PatientPosition": "HFS", - "ProcedureStepDescription": "R.M._DEL_CERVELLO_E_DEL_TRONCO_ENCEFALICO_-_3T", - "SoftwareVersions": "syngo_MR_D13C", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-MT1", - "ProtocolName": "GRE-MT1", - "ScanningSequence": "GR", - "SequenceVariant": "MTC_SP", - "ScanOptions": "MT", - "SequenceName": "_fl3d1", + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 123.228, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Skyra", + "InstitutionName": "Istituto_Neurologico_Mondino", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "Via_Mondino_2_Pavia_District_IT_27100", + "DeviceSerialNumber": "45358", + "StationName": "AWP45358", + "BodyPartExamined": "HEAD", + "PatientPosition": "HFS", + "ProcedureStepDescription": "R.M._DEL_CERVELLO_E_DEL_TRONCO_ENCEFALICO_-_3T", + "SoftwareVersions": "syngo_MR_D13C", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-MT1", + "ProtocolName": "GRE-MT1", + "ScanningSequence": "GR", + "SequenceVariant": "MTC_SP", + "ScanOptions": "MT", + "SequenceName": "_fl3d1", "ImageType": [ - "ORIGINAL", - "PRIMARY", - "M", - "NORM", + "ORIGINAL", + "PRIMARY", + "M", + "NORM", "DIS2D" - ], - "SeriesNumber": 6, - "AcquisitionTime": "16:03:6.232500", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SAR": 0.675222, - "EchoTime": 0.00316, - "RepetitionTime": 0.035, - "FlipAngle": 9, - "PartialFourier": 1, - "BaseResolution": 256, + ], + "SeriesNumber": 6, + "AcquisitionTime": "16:03:6.232500", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SAR": 0.675222, + "EchoTime": 0.00316, + "RepetitionTime": 0.035, + "FlipAngle": 9, + "PartialFourier": 1, + "BaseResolution": 256, "ShimSetting": [ - 6760, - -878, - 6881, - -181, - 214, - 673, - 205, + 6760, + -878, + 6881, + -181, + 214, + 673, + 205, -50 - ], - "TxRefAmp": 382.374, - "PhaseResolution": 1, - "ReceiveCoilName": "Spine_32", - "ReceiveCoilActiveElements": "HE3,4;NE1,2;SP1", - "CoilString": "HE3_4;NE1_2;SP1", - "PulseSequenceDetails": "%SiemensSeq%_gre", - "ConsistencyInfo": "N4_VD13C_LATEST_20121124", - "PercentPhaseFOV": 100, - "PhaseEncodingSteps": 255, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 256, - "PixelBandwidth": 260, - "DwellTime": 7.5e-06, + ], + "TxRefAmp": 382.374, + "PhaseResolution": 1, + "ReceiveCoilName": "Spine_32", + "ReceiveCoilActiveElements": "HE3,4;NE1,2;SP1", + "CoilString": "HE3_4;NE1_2;SP1", + "PulseSequenceDetails": "%SiemensSeq%_gre", + "ConsistencyInfo": "N4_VD13C_LATEST_20121124", + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 255, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "PixelBandwidth": 260, + "DwellTime": 7.5e-06, "ImageOrientationPatientDICOM": [ - 1, - 0, - 0, - 0, - 0.984808, + 1, + 0, + 0, + 0, + 0.984808, 0.173648 - ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181125 GCC4.8.2", - "Dcm2bidsVersion": "2.1.4" + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181125 GCC4.8.2", + "Dcm2bidsVersion": "2.1.4", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-pavia01/anat/sub-pavia01_flip-2_mt-off_space-other_MTS.json b/derivatives/data_preprocessed/sub-pavia01/anat/sub-pavia01_flip-2_mt-off_space-other_MTS.json index 58b6d0e6b5..4c2d4ae30a 100644 --- a/derivatives/data_preprocessed/sub-pavia01/anat/sub-pavia01_flip-2_mt-off_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-pavia01/anat/sub-pavia01_flip-2_mt-off_space-other_MTS.json @@ -1,74 +1,77 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.228, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Skyra", - "InstitutionName": "Istituto_Neurologico_Mondino", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "Via_Mondino_2_Pavia_District_IT_27100", - "DeviceSerialNumber": "45358", - "StationName": "AWP45358", 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285.0, + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-pavia01/anat/sub-pavia01_space-other_T2w.json b/derivatives/data_preprocessed/sub-pavia01/anat/sub-pavia01_space-other_T2w.json index 3c6b78d5aa..02196ec411 100644 --- a/derivatives/data_preprocessed/sub-pavia01/anat/sub-pavia01_space-other_T2w.json +++ b/derivatives/data_preprocessed/sub-pavia01/anat/sub-pavia01_space-other_T2w.json @@ -1,78 +1,82 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.228, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Skyra", - "InstitutionName": "Istituto_Neurologico_Mondino", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "Via_Mondino_2_Pavia_District_IT_27100", - "DeviceSerialNumber": "45358", - "StationName": "AWP45358", - "BodyPartExamined": "HEAD", - "PatientPosition": "HFS", - 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"ManufacturersModelName": "Skyra", - "InstitutionName": "Istituto_Neurologico_Mondino", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "Via_Mondino_2_Pavia_District_IT_27100", - "DeviceSerialNumber": "45358", - "StationName": "AWP45358", - "BodyPartExamined": "HEAD", - "PatientPosition": "HFS", - "ProcedureStepDescription": "R.M._DEL_CERVELLO_E_DEL_TRONCO_ENCEFALICO_-_3T", - "SoftwareVersions": "syngo_MR_D13C", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-MT1", - "ProtocolName": "GRE-MT1", - "ScanningSequence": "GR", - "SequenceVariant": "MTC_SP", - "ScanOptions": "MT", - "SequenceName": "_fl3d1", + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 123.228, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Skyra", + "InstitutionName": "Istituto_Neurologico_Mondino", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "Via_Mondino_2_Pavia_District_IT_27100", + "DeviceSerialNumber": "45358", + 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b/derivatives/data_preprocessed/sub-pavia02/anat/sub-pavia02_flip-2_mt-off_space-other_MTS.json @@ -1,74 +1,77 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.228, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Skyra", - "InstitutionName": "Istituto_Neurologico_Mondino", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "Via_Mondino_2_Pavia_District_IT_27100", - "DeviceSerialNumber": "45358", - "StationName": "AWP45358", - "BodyPartExamined": "HEAD", - "PatientPosition": "HFS", - "ProcedureStepDescription": "R.M._DEL_CERVELLO_E_DEL_TRONCO_ENCEFALICO_-_3T", - "SoftwareVersions": "syngo_MR_D13C", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-T1w", - "ProtocolName": "GRE-T1w", - "ScanningSequence": "GR", - "SequenceVariant": "SP", - "SequenceName": "_fl3d1", + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 123.228, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Skyra", + 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100644 --- a/derivatives/data_preprocessed/sub-pavia02/anat/sub-pavia02_space-other_T1w.json +++ b/derivatives/data_preprocessed/sub-pavia02/anat/sub-pavia02_space-other_T1w.json @@ -1,77 +1,81 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.228, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Skyra", - "InstitutionName": "Istituto_Neurologico_Mondino", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "Via_Mondino_2_Pavia_District_IT_27100", - "DeviceSerialNumber": "45358", - "StationName": "AWP45358", - "BodyPartExamined": "HEAD", - "PatientPosition": "HFS", - "ProcedureStepDescription": "R.M._DEL_CERVELLO_E_DEL_TRONCO_ENCEFALICO_-_3T", - "SoftwareVersions": "syngo_MR_D13C", - "MRAcquisitionType": "3D", - "SeriesDescription": "T1w", - "ProtocolName": "T1w", - "ScanningSequence": "GR_IR", - "SequenceVariant": "SK_SP_MP", - "ScanOptions": "IR", - "SequenceName": "_tfl3d1_16", + "Modality": "MR", + "MagneticFieldStrength": 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a/derivatives/data_preprocessed/sub-pavia02/anat/sub-pavia02_space-other_T2w.json +++ b/derivatives/data_preprocessed/sub-pavia02/anat/sub-pavia02_space-other_T2w.json @@ -1,78 +1,82 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.228, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Skyra", - "InstitutionName": "Istituto_Neurologico_Mondino", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "Via_Mondino_2_Pavia_District_IT_27100", - "DeviceSerialNumber": "45358", - "StationName": "AWP45358", - "BodyPartExamined": "HEAD", - "PatientPosition": "HFS", - "ProcedureStepDescription": "R.M._DEL_CERVELLO_E_DEL_TRONCO_ENCEFALICO_-_3T", - "SoftwareVersions": "syngo_MR_D13C", - "MRAcquisitionType": "3D", - "SeriesDescription": "T2w", - "ProtocolName": "T2w", - "ScanningSequence": "SE", - "SequenceVariant": "SK_SP_OSP", - "ScanOptions": "PFP", - "SequenceName": "_spcR_100", + "Modality": "MR", + "MagneticFieldStrength": 3, + 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of file diff --git a/derivatives/data_preprocessed/sub-pavia03/anat/sub-pavia03_flip-1_mt-on_space-other_MTS.json b/derivatives/data_preprocessed/sub-pavia03/anat/sub-pavia03_flip-1_mt-on_space-other_MTS.json index 1f861f0185..0d5ab025c2 100644 --- a/derivatives/data_preprocessed/sub-pavia03/anat/sub-pavia03_flip-1_mt-on_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-pavia03/anat/sub-pavia03_flip-1_mt-on_space-other_MTS.json @@ -1,75 +1,78 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.228, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Skyra", - "InstitutionName": "Istituto_Neurologico_Mondino", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "Via_Mondino_2_Pavia_District_IT_27100", - "DeviceSerialNumber": "45358", - "StationName": "AWP45358", - "BodyPartExamined": "HEADNECK", - "PatientPosition": "HFS", - "ProcedureStepDescription": "R.M._DEL_CERVELLO_E_DEL_TRONCO_ENCEFALICO_-_3T", - "SoftwareVersions": 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7413, - 252, - 90, - -254, - 726, + 6776, + -672, + 7413, + 252, + 90, + -254, + 726, -167 - ], - "TxRefAmp": 388.197, - "PhaseResolution": 1, - "ReceiveCoilName": "Spine_32", - "ReceiveCoilActiveElements": "HE1-4;NE1,2;SP1,2", - "CoilString": "HE1-4;NE1_2;SP1_2", - "PulseSequenceDetails": "%SiemensSeq%_tfl", - "ConsistencyInfo": "N4_VD13C_LATEST_20121124", - "PercentPhaseFOV": 81.25, - "PhaseEncodingSteps": 259, - "AcquisitionMatrixPE": 260, - "ReconMatrixPE": 320, - "PixelBandwidth": 150, - "DwellTime": 1.04e-05, + ], + "TxRefAmp": 388.197, + "PhaseResolution": 1, + "ReceiveCoilName": "Spine_32", + "ReceiveCoilActiveElements": "HE1-4;NE1,2;SP1,2", + "CoilString": "HE1-4;NE1_2;SP1_2", + "PulseSequenceDetails": "%SiemensSeq%_tfl", + "ConsistencyInfo": "N4_VD13C_LATEST_20121124", + "PercentPhaseFOV": 81.25, + "PhaseEncodingSteps": 259, + "AcquisitionMatrixPE": 260, + "ReconMatrixPE": 320, + "PixelBandwidth": 150, + "DwellTime": 1.04e-05, "ImageOrientationPatientDICOM": [ - 1.21997e-05, 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6694, + -1005, + 7272, + 177, + -59, + -1056, + 1941, -313 - ], - "TxRefAmp": 405.067, - "PhaseResolution": 1, - "PhaseOversampling": 0.8, - "ReceiveCoilName": "Spine_32", - "ReceiveCoilActiveElements": "HE1-4;NE1,2;SP1,2", - "CoilString": "HE1-4;NE1_2;SP1_2", - "PulseSequenceDetails": "%SiemensSeq%_tse_vfl", - "ConsistencyInfo": "N4_VD13C_LATEST_20121124", - "PercentPhaseFOV": 100, - "EchoTrainLength": 77, - "PhaseEncodingSteps": 431, - "AcquisitionMatrixPE": 320, - "ReconMatrixPE": 320, - "PixelBandwidth": 625, - "DwellTime": 2.5e-06, + ], + "TxRefAmp": 405.067, + "PhaseResolution": 1, + "PhaseOversampling": 0.8, + "ReceiveCoilName": "Spine_32", + "ReceiveCoilActiveElements": "HE1-4;NE1,2;SP1,2", + "CoilString": "HE1-4;NE1_2;SP1_2", + "PulseSequenceDetails": "%SiemensSeq%_tse_vfl", + "ConsistencyInfo": "N4_VD13C_LATEST_20121124", + "PercentPhaseFOV": 100, + "EchoTrainLength": 77, + "PhaseEncodingSteps": 431, + "AcquisitionMatrixPE": 320, + "ReconMatrixPE": 320, + "PixelBandwidth": 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a/derivatives/data_preprocessed/sub-pavia04/anat/sub-pavia04_flip-1_mt-on_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-pavia04/anat/sub-pavia04_flip-1_mt-on_space-other_MTS.json @@ -1,75 +1,78 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.228, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Skyra", - "InstitutionName": "Istituto_Neurologico_Mondino", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "Via_Mondino_2_Pavia_District_IT_27100", - "DeviceSerialNumber": "45358", - "StationName": "AWP45358", - "BodyPartExamined": "HEAD", - "PatientPosition": "HFS", - "ProcedureStepDescription": "R.M._DEL_CERVELLO_E_DEL_TRONCO_ENCEFALICO_-_3T", - "SoftwareVersions": "syngo_MR_D13C", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-MT1", - "ProtocolName": "GRE-MT1", - "ScanningSequence": "GR", - "SequenceVariant": "MTC_SP", - "ScanOptions": "MT", - "SequenceName": "_fl3d1", + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 123.228, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Skyra", + "InstitutionName": "Istituto_Neurologico_Mondino", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "Via_Mondino_2_Pavia_District_IT_27100", + "DeviceSerialNumber": "45358", + "StationName": "AWP45358", + "BodyPartExamined": "HEAD", + "PatientPosition": "HFS", + "ProcedureStepDescription": "R.M._DEL_CERVELLO_E_DEL_TRONCO_ENCEFALICO_-_3T", + "SoftwareVersions": "syngo_MR_D13C", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-MT1", + "ProtocolName": "GRE-MT1", + "ScanningSequence": "GR", + "SequenceVariant": "MTC_SP", + "ScanOptions": "MT", + "SequenceName": "_fl3d1", "ImageType": [ - "ORIGINAL", - "PRIMARY", - "M", - "NORM", + "ORIGINAL", + "PRIMARY", + "M", + "NORM", "DIS2D" - ], - "SeriesNumber": 6, - "AcquisitionTime": "19:11:10.430000", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SAR": 0.766275, - "EchoTime": 0.00316, - "RepetitionTime": 0.035, - "FlipAngle": 9, - "PartialFourier": 1, - "BaseResolution": 256, + ], + "SeriesNumber": 6, + "AcquisitionTime": "19:11:10.430000", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SAR": 0.766275, + "EchoTime": 0.00316, + "RepetitionTime": 0.035, + "FlipAngle": 9, + "PartialFourier": 1, + "BaseResolution": 256, "ShimSetting": [ - 6663, - -728, - 6960, - -474, - -156, - 549, - 335, + 6663, + -728, + 6960, + -474, + -156, + 549, + 335, -57 - ], - "TxRefAmp": 389.196, - "PhaseResolution": 1, - "ReceiveCoilName": "Spine_32", - "ReceiveCoilActiveElements": "HE3,4;NE1,2;SP1", - "CoilString": "HE3_4;NE1_2;SP1", - "PulseSequenceDetails": "%SiemensSeq%_gre", - "ConsistencyInfo": "N4_VD13C_LATEST_20121124", - "PercentPhaseFOV": 100, - "PhaseEncodingSteps": 255, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 256, - "PixelBandwidth": 260, - "DwellTime": 7.5e-06, + ], + "TxRefAmp": 389.196, + "PhaseResolution": 1, + "ReceiveCoilName": "Spine_32", + "ReceiveCoilActiveElements": "HE3,4;NE1,2;SP1", + "CoilString": "HE3_4;NE1_2;SP1", + "PulseSequenceDetails": "%SiemensSeq%_gre", + "ConsistencyInfo": "N4_VD13C_LATEST_20121124", + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 255, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "PixelBandwidth": 260, + "DwellTime": 7.5e-06, "ImageOrientationPatientDICOM": [ - 0.999658, - -0.00593107, - 0.0254863, - -3.23784e-08, - 0.973974, + 0.999658, + -0.00593107, + 0.0254863, + -3.23784e-08, + 0.973974, 0.22666 - ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181125 GCC4.8.2", - "Dcm2bidsVersion": "2.1.4" + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181125 GCC4.8.2", + "Dcm2bidsVersion": "2.1.4", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-pavia04/anat/sub-pavia04_flip-2_mt-off_space-other_MTS.json b/derivatives/data_preprocessed/sub-pavia04/anat/sub-pavia04_flip-2_mt-off_space-other_MTS.json index 38161948d0..5dbb40c2c3 100644 --- a/derivatives/data_preprocessed/sub-pavia04/anat/sub-pavia04_flip-2_mt-off_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-pavia04/anat/sub-pavia04_flip-2_mt-off_space-other_MTS.json @@ -1,74 +1,77 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.228, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Skyra", - "InstitutionName": "Istituto_Neurologico_Mondino", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "Via_Mondino_2_Pavia_District_IT_27100", - "DeviceSerialNumber": "45358", - "StationName": "AWP45358", - "BodyPartExamined": "HEAD", - "PatientPosition": "HFS", - "ProcedureStepDescription": "R.M._DEL_CERVELLO_E_DEL_TRONCO_ENCEFALICO_-_3T", - "SoftwareVersions": "syngo_MR_D13C", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-T1w", - "ProtocolName": "GRE-T1w", - "ScanningSequence": "GR", - "SequenceVariant": "SP", - "SequenceName": "_fl3d1", + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 123.228, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Skyra", + "InstitutionName": "Istituto_Neurologico_Mondino", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "Via_Mondino_2_Pavia_District_IT_27100", + "DeviceSerialNumber": "45358", + "StationName": "AWP45358", + "BodyPartExamined": "HEAD", + "PatientPosition": "HFS", + "ProcedureStepDescription": "R.M._DEL_CERVELLO_E_DEL_TRONCO_ENCEFALICO_-_3T", + "SoftwareVersions": "syngo_MR_D13C", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-T1w", + "ProtocolName": "GRE-T1w", + "ScanningSequence": "GR", + "SequenceVariant": "SP", + "SequenceName": "_fl3d1", "ImageType": [ - "ORIGINAL", - "PRIMARY", - "M", - "NORM", + "ORIGINAL", + "PRIMARY", + "M", + 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"Dcm2bidsVersion": "2.1.4", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-pavia04/anat/sub-pavia04_space-other_T1w.json b/derivatives/data_preprocessed/sub-pavia04/anat/sub-pavia04_space-other_T1w.json index 20a0339859..2ec4ccd073 100644 --- a/derivatives/data_preprocessed/sub-pavia04/anat/sub-pavia04_space-other_T1w.json +++ b/derivatives/data_preprocessed/sub-pavia04/anat/sub-pavia04_space-other_T1w.json @@ -1,77 +1,81 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.228, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Skyra", - "InstitutionName": "Istituto_Neurologico_Mondino", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "Via_Mondino_2_Pavia_District_IT_27100", - "DeviceSerialNumber": "45358", - "StationName": "AWP45358", - "BodyPartExamined": "HEAD", - "PatientPosition": "HFS", - "ProcedureStepDescription": 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"ScanOptions": "IR", + "SequenceName": "_tfl3d1_16", "ImageType": [ - "ORIGINAL", - "PRIMARY", - "M", - "NORM", - "DIS3D", + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS3D", "DIS2D" - ], - "SeriesNumber": 3, - "AcquisitionTime": "18:53:31.720000", - "AcquisitionNumber": 1, - "SliceThickness": 1, - "SAR": 0.0992274, - "EchoTime": 0.00372, - "RepetitionTime": 2, - "InversionTime": 1, - "FlipAngle": 9, - "PartialFourier": 1, - "BaseResolution": 320, + ], + "SeriesNumber": 3, + "AcquisitionTime": "18:53:31.720000", + "AcquisitionNumber": 1, + "SliceThickness": 1, + "SAR": 0.0992274, + "EchoTime": 0.00372, + "RepetitionTime": 2, + "InversionTime": 1, + "FlipAngle": 9, + "PartialFourier": 1, + "BaseResolution": 320, "ShimSetting": [ - 6774, - -818, - 7225, - 262, - 113, - -376, - 604, + 6774, + -818, + 7225, + 262, + 113, + -376, + 604, 71 - ], - "TxRefAmp": 385.02, - "PhaseResolution": 1, - "ReceiveCoilName": "HeadNeck_20", - "ReceiveCoilActiveElements": "HE1-4;NE1,2;SP1", - "CoilString": "HE1-4;NE1_2;SP1", - "PulseSequenceDetails": "%SiemensSeq%_tfl", - "ConsistencyInfo": "N4_VD13C_LATEST_20121124", - "PercentPhaseFOV": 81.25, - "PhaseEncodingSteps": 259, - "AcquisitionMatrixPE": 260, - "ReconMatrixPE": 320, - "PixelBandwidth": 150, - "DwellTime": 1.04e-05, + ], + "TxRefAmp": 385.02, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_20", + "ReceiveCoilActiveElements": "HE1-4;NE1,2;SP1", + "CoilString": "HE1-4;NE1_2;SP1", + "PulseSequenceDetails": "%SiemensSeq%_tfl", + "ConsistencyInfo": "N4_VD13C_LATEST_20121124", + "PercentPhaseFOV": 81.25, + "PhaseEncodingSteps": 259, + "AcquisitionMatrixPE": 260, + "ReconMatrixPE": 320, + "PixelBandwidth": 150, + "DwellTime": 1.04e-05, "ImageOrientationPatientDICOM": [ - 0, - 1, - -0.000349045, - 0, - -0.000349045, + 0, + 1, + -0.000349045, + 0, + -0.000349045, -1 - ], - "InPlanePhaseEncodingDirectionDICOM": "ROW", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181125 GCC4.8.2", - "Dcm2bidsVersion": "2.1.4" + ], + "InPlanePhaseEncodingDirectionDICOM": "ROW", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181125 GCC4.8.2", + "Dcm2bidsVersion": "2.1.4", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-pavia04/anat/sub-pavia04_space-other_T2star.json b/derivatives/data_preprocessed/sub-pavia04/anat/sub-pavia04_space-other_T2star.json index 8fa84b2467..108baeba0d 100644 --- a/derivatives/data_preprocessed/sub-pavia04/anat/sub-pavia04_space-other_T2star.json +++ b/derivatives/data_preprocessed/sub-pavia04/anat/sub-pavia04_space-other_T2star.json @@ -76,5 +76,9 @@ "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20181125 GCC4.8.2", "Dcm2bidsVersion": "2.1.4", - "AcquisitionDuration": 285.0 + "AcquisitionDuration": 285.0, + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-pavia04/anat/sub-pavia04_space-other_T2w.json b/derivatives/data_preprocessed/sub-pavia04/anat/sub-pavia04_space-other_T2w.json index 268e2b8620..9df1f41f21 100644 --- a/derivatives/data_preprocessed/sub-pavia04/anat/sub-pavia04_space-other_T2w.json +++ b/derivatives/data_preprocessed/sub-pavia04/anat/sub-pavia04_space-other_T2w.json @@ -1,78 +1,82 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.228, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Skyra", - "InstitutionName": "Istituto_Neurologico_Mondino", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "Via_Mondino_2_Pavia_District_IT_27100", - "DeviceSerialNumber": "45358", - "StationName": "AWP45358", - "BodyPartExamined": "HEAD", - "PatientPosition": "HFS", - "ProcedureStepDescription": "R.M._DEL_CERVELLO_E_DEL_TRONCO_ENCEFALICO_-_3T", - "SoftwareVersions": 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"PRIMARY", - "M", - "NORM", - "DIS3D", + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS3D", "DIS2D" - ], - "SeriesNumber": 4, - "AcquisitionTime": "19:02:39.185000", - "AcquisitionNumber": 1, - "SliceThickness": 0.8, - "SAR": 0.779903, - "EchoTime": 0.122, - "RepetitionTime": 1.5, - "FlipAngle": 120, - "PartialFourier": 1, - "BaseResolution": 320, + ], + "SeriesNumber": 4, + "AcquisitionTime": "19:02:39.185000", + "AcquisitionNumber": 1, + "SliceThickness": 0.8, + "SAR": 0.779903, + "EchoTime": 0.122, + "RepetitionTime": 1.5, + "FlipAngle": 120, + "PartialFourier": 1, + "BaseResolution": 320, "ShimSetting": [ - 6753, - -1194, - 6903, - -102, - 91, - -962, - 2826, + 6753, + -1194, + 6903, + -102, + 91, + -962, + 2826, 339 - ], - "TxRefAmp": 389.196, - "PhaseResolution": 1, - "PhaseOversampling": 0.8, - "ReceiveCoilName": "Spine_32", - "ReceiveCoilActiveElements": "HE3,4;NE1,2;SP1", - "CoilString": "HE3_4;NE1_2;SP1", - "PulseSequenceDetails": "%SiemensSeq%_tse_vfl", - 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"ConversionSoftwareVersion": "v1.0.20181125 GCC4.8.2", - "Dcm2bidsVersion": "2.1.4" + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181125 GCC4.8.2", + "Dcm2bidsVersion": "2.1.4", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-pavia05/anat/sub-pavia05_flip-1_mt-on_space-other_MTS.json b/derivatives/data_preprocessed/sub-pavia05/anat/sub-pavia05_flip-1_mt-on_space-other_MTS.json index 2f6d075bff..cfbe1e484e 100644 --- a/derivatives/data_preprocessed/sub-pavia05/anat/sub-pavia05_flip-1_mt-on_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-pavia05/anat/sub-pavia05_flip-1_mt-on_space-other_MTS.json @@ -1,75 +1,78 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.228, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Skyra", - "InstitutionName": 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"PatientPosition": "HFS", + "ProcedureStepDescription": "R.M._DEL_CERVELLO_E_DEL_TRONCO_ENCEFALICO_-_3T", + "SoftwareVersions": "syngo_MR_D13C", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-MT1", + "ProtocolName": "GRE-MT1", + "ScanningSequence": "GR", + "SequenceVariant": "MTC_SP", + "ScanOptions": "MT", + "SequenceName": "_fl3d1", "ImageType": [ - "ORIGINAL", - "PRIMARY", - "M", - "NORM", + "ORIGINAL", + "PRIMARY", + "M", + "NORM", "DIS2D" - ], - "SeriesNumber": 5, - "AcquisitionTime": "19:58:33.387500", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SAR": 0.900128, - "EchoTime": 0.00316, - "RepetitionTime": 0.035, - "FlipAngle": 9, - "PartialFourier": 1, - "BaseResolution": 256, + ], + "SeriesNumber": 5, + "AcquisitionTime": "19:58:33.387500", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SAR": 0.900128, + "EchoTime": 0.00316, + "RepetitionTime": 0.035, + "FlipAngle": 9, + "PartialFourier": 1, + "BaseResolution": 256, "ShimSetting": [ - 6836, - -755, - 7232, - -565, - -6, - 1567, - 1246, + 6836, + -755, + 7232, + -565, + -6, + 1567, + 1246, 570 - ], - "TxRefAmp": 464.031, - "PhaseResolution": 1, - "ReceiveCoilName": "HeadNeck_20", - "ReceiveCoilActiveElements": "NE1,2;SP1", - "CoilString": "NE1_2;SP1", - "PulseSequenceDetails": "%SiemensSeq%_gre", - "ConsistencyInfo": "N4_VD13C_LATEST_20121124", - "PercentPhaseFOV": 100, - "PhaseEncodingSteps": 255, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 256, - "PixelBandwidth": 260, - "DwellTime": 7.5e-06, + ], + "TxRefAmp": 464.031, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_20", + "ReceiveCoilActiveElements": "NE1,2;SP1", + "CoilString": "NE1_2;SP1", + "PulseSequenceDetails": "%SiemensSeq%_gre", + "ConsistencyInfo": "N4_VD13C_LATEST_20121124", + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 255, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "PixelBandwidth": 260, + "DwellTime": 7.5e-06, "ImageOrientationPatientDICOM": [ - 0.998935, - -0.010859, - 0.044836, - -3.24159e-08, 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b/derivatives/data_preprocessed/sub-pavia05/anat/sub-pavia05_space-other_T1w.json @@ -1,77 +1,81 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.228, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Skyra", - "InstitutionName": "Istituto_Neurologico_Mondino", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "Via_Mondino_2_Pavia_District_IT_27100", - "DeviceSerialNumber": "45358", - "StationName": "AWP45358", - "BodyPartExamined": "HEADNECK", - "PatientPosition": "HFS", - "ProcedureStepDescription": "R.M._DEL_CERVELLO_E_DEL_TRONCO_ENCEFALICO_-_3T", - "SoftwareVersions": "syngo_MR_D13C", - "MRAcquisitionType": "3D", - "SeriesDescription": "T1w", - "ProtocolName": "T1w", - "ScanningSequence": "GR_IR", - "SequenceVariant": "SK_SP_MP", - "ScanOptions": "IR", - "SequenceName": "_tfl3d1_16", + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 123.228, + "Manufacturer": "Siemens", + "ManufacturersModelName": 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a/derivatives/data_preprocessed/sub-pavia05/anat/sub-pavia05_space-other_T2star.json b/derivatives/data_preprocessed/sub-pavia05/anat/sub-pavia05_space-other_T2star.json index 5713fdb3d9..930b552d52 100644 --- a/derivatives/data_preprocessed/sub-pavia05/anat/sub-pavia05_space-other_T2star.json +++ b/derivatives/data_preprocessed/sub-pavia05/anat/sub-pavia05_space-other_T2star.json @@ -76,5 +76,9 @@ "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20181125 GCC4.8.2", "Dcm2bidsVersion": "2.1.4", - "AcquisitionDuration": 285.0 + "AcquisitionDuration": 285.0, + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-pavia05/anat/sub-pavia05_space-other_T2w.json b/derivatives/data_preprocessed/sub-pavia05/anat/sub-pavia05_space-other_T2w.json index 68d3a0b20b..809e598422 100644 --- a/derivatives/data_preprocessed/sub-pavia05/anat/sub-pavia05_space-other_T2w.json +++ b/derivatives/data_preprocessed/sub-pavia05/anat/sub-pavia05_space-other_T2w.json @@ -1,78 +1,82 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.228, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Skyra", - "InstitutionName": "Istituto_Neurologico_Mondino", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "Via_Mondino_2_Pavia_District_IT_27100", - "DeviceSerialNumber": "45358", - "StationName": "AWP45358", - "BodyPartExamined": "HEADNECK", - "PatientPosition": "HFS", - "ProcedureStepDescription": "R.M._DEL_CERVELLO_E_DEL_TRONCO_ENCEFALICO_-_3T", - "SoftwareVersions": "syngo_MR_D13C", - "MRAcquisitionType": "3D", - "SeriesDescription": "T2w", - "ProtocolName": "T2w", - "ScanningSequence": "SE", - "SequenceVariant": "SK_SP_OSP", - "ScanOptions": "PFP", - "SequenceName": "_spcR_100", + "Modality": "MR", + "MagneticFieldStrength": 3, + 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"Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-pavia06/anat/sub-pavia06_flip-1_mt-on_space-other_MTS.json b/derivatives/data_preprocessed/sub-pavia06/anat/sub-pavia06_flip-1_mt-on_space-other_MTS.json index 1a92a3f415..ead3f44698 100644 --- a/derivatives/data_preprocessed/sub-pavia06/anat/sub-pavia06_flip-1_mt-on_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-pavia06/anat/sub-pavia06_flip-1_mt-on_space-other_MTS.json @@ -1,75 +1,78 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.228, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Skyra", - "InstitutionName": "Istituto_Neurologico_Mondino", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "Via_Mondino_2_Pavia_District_IT_27100", - "DeviceSerialNumber": "45358", - "StationName": "AWP45358", - "BodyPartExamined": "CSPINE", - "PatientPosition": "HFS", - 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GCC4.8.2", + "Dcm2bidsVersion": "2.1.4", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-pavia06/anat/sub-pavia06_flip-2_mt-off_space-other_MTS.json b/derivatives/data_preprocessed/sub-pavia06/anat/sub-pavia06_flip-2_mt-off_space-other_MTS.json index 207efef595..c0eddf9a9a 100644 --- a/derivatives/data_preprocessed/sub-pavia06/anat/sub-pavia06_flip-2_mt-off_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-pavia06/anat/sub-pavia06_flip-2_mt-off_space-other_MTS.json @@ -1,74 +1,77 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.228, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Skyra", - "InstitutionName": "Istituto_Neurologico_Mondino", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "Via_Mondino_2_Pavia_District_IT_27100", - "DeviceSerialNumber": "45358", - "StationName": "AWP45358", - "BodyPartExamined": "CSPINE", - 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GCC4.8.2", + "Dcm2bidsVersion": "2.1.4", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-pavia06/anat/sub-pavia06_space-other_T1w.json b/derivatives/data_preprocessed/sub-pavia06/anat/sub-pavia06_space-other_T1w.json index 201ded3417..dec43e74c9 100644 --- a/derivatives/data_preprocessed/sub-pavia06/anat/sub-pavia06_space-other_T1w.json +++ b/derivatives/data_preprocessed/sub-pavia06/anat/sub-pavia06_space-other_T1w.json @@ -1,77 +1,81 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.228, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Skyra", - "InstitutionName": "Istituto_Neurologico_Mondino", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "Via_Mondino_2_Pavia_District_IT_27100", - "DeviceSerialNumber": "45358", - "StationName": "AWP45358", - "BodyPartExamined": "CSPINE", - "PatientPosition": "HFS", - "ProcedureStepDescription": 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"ImageType": [ - "ORIGINAL", - "PRIMARY", - "M", - "NORM", - "DIS3D", + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS3D", "DIS2D" - ], - "SeriesNumber": 2, - "AcquisitionTime": "19:12:21.662500", - "AcquisitionNumber": 1, - "SliceThickness": 1, - "SAR": 0.0925812, - "EchoTime": 0.00372, - "RepetitionTime": 2, - "InversionTime": 1, - "FlipAngle": 9, - "PartialFourier": 1, - "BaseResolution": 320, + ], + "SeriesNumber": 2, + "AcquisitionTime": "19:12:21.662500", + "AcquisitionNumber": 1, + "SliceThickness": 1, + "SAR": 0.0925812, + "EchoTime": 0.00372, + "RepetitionTime": 2, + "InversionTime": 1, + "FlipAngle": 9, + "PartialFourier": 1, + "BaseResolution": 320, "ShimSetting": [ - 6782, - -649, - 7418, - 296, - 274, - -287, - 354, + 6782, + -649, + 7418, + 296, + 274, + -287, + 354, 18 - ], - "TxRefAmp": 406.021, - "PhaseResolution": 1, - "ReceiveCoilName": "Spine_32", - "ReceiveCoilActiveElements": "HE1-4;NE1,2;SP1", - "CoilString": "HE1-4;NE1_2;SP1", - "PulseSequenceDetails": 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"2.1.4" + ], + "InPlanePhaseEncodingDirectionDICOM": "ROW", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181125 GCC4.8.2", + "Dcm2bidsVersion": "2.1.4", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-pavia06/anat/sub-pavia06_space-other_T2star.json b/derivatives/data_preprocessed/sub-pavia06/anat/sub-pavia06_space-other_T2star.json index d49b3ba024..06c95a2ff0 100644 --- a/derivatives/data_preprocessed/sub-pavia06/anat/sub-pavia06_space-other_T2star.json +++ b/derivatives/data_preprocessed/sub-pavia06/anat/sub-pavia06_space-other_T2star.json @@ -76,5 +76,9 @@ "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20181125 GCC4.8.2", "Dcm2bidsVersion": "2.1.4", - "AcquisitionDuration": 285.0 + "AcquisitionDuration": 285.0, + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-pavia06/anat/sub-pavia06_space-other_T2w.json b/derivatives/data_preprocessed/sub-pavia06/anat/sub-pavia06_space-other_T2w.json index 3e398e6152..eeeb340e0d 100644 --- a/derivatives/data_preprocessed/sub-pavia06/anat/sub-pavia06_space-other_T2w.json +++ b/derivatives/data_preprocessed/sub-pavia06/anat/sub-pavia06_space-other_T2w.json @@ -1,78 +1,82 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.228, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Skyra", - "InstitutionName": "Istituto_Neurologico_Mondino", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "Via_Mondino_2_Pavia_District_IT_27100", - "DeviceSerialNumber": "45358", - "StationName": "AWP45358", - "BodyPartExamined": "CSPINE", - "PatientPosition": "HFS", - "ProcedureStepDescription": "R.M._CERVICALE_-_3T", - "SoftwareVersions": "syngo_MR_D13C", - "MRAcquisitionType": "3D", - "SeriesDescription": "T2w", - "ProtocolName": "T2w", - "ScanningSequence": "SE", - "SequenceVariant": "SK_SP_OSP", - "ScanOptions": "PFP", - "SequenceName": "_spcR_100", + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 123.228, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Skyra", + "InstitutionName": "Istituto_Neurologico_Mondino", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "Via_Mondino_2_Pavia_District_IT_27100", + "DeviceSerialNumber": "45358", + "StationName": "AWP45358", + "BodyPartExamined": "CSPINE", + "PatientPosition": "HFS", + "ProcedureStepDescription": "R.M._CERVICALE_-_3T", + "SoftwareVersions": "syngo_MR_D13C", + "MRAcquisitionType": "3D", + "SeriesDescription": "T2w", + "ProtocolName": "T2w", + "ScanningSequence": "SE", + "SequenceVariant": "SK_SP_OSP", + "ScanOptions": "PFP", + "SequenceName": "_spcR_100", "ImageType": [ - "ORIGINAL", - "PRIMARY", - "M", - "NORM", - "DIS3D", + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS3D", "DIS2D" - ], - "SeriesNumber": 3, - "AcquisitionTime": "19:19:45.262500", - "AcquisitionNumber": 1, - "SliceThickness": 0.8, - "SAR": 0.741625, - "EchoTime": 0.122, - "RepetitionTime": 1.5, - "FlipAngle": 120, - "PartialFourier": 1, - "BaseResolution": 320, + ], + "SeriesNumber": 3, + "AcquisitionTime": "19:19:45.262500", + "AcquisitionNumber": 1, + "SliceThickness": 0.8, + "SAR": 0.741625, + "EchoTime": 0.122, + "RepetitionTime": 1.5, + "FlipAngle": 120, + "PartialFourier": 1, + "BaseResolution": 320, "ShimSetting": [ - 6699, - -713, - 6974, - -317, - 119, - -991, - 1549, + 6699, + -713, + 6974, + -317, + 119, + -991, + 1549, -416 - ], - "TxRefAmp": 407.77, - "PhaseResolution": 1, - "PhaseOversampling": 0.8, - "ReceiveCoilName": "Spine_32", - "ReceiveCoilActiveElements": "HE3,4;NE1,2;SP1", - "CoilString": "HE3_4;NE1_2;SP1", - "PulseSequenceDetails": "%SiemensSeq%_tse_vfl", - "ConsistencyInfo": "N4_VD13C_LATEST_20121124", - "PercentPhaseFOV": 100, - "EchoTrainLength": 77, - "PhaseEncodingSteps": 431, - "AcquisitionMatrixPE": 320, - "ReconMatrixPE": 320, - "PixelBandwidth": 625, - "DwellTime": 2.5e-06, + ], + "TxRefAmp": 407.77, + "PhaseResolution": 1, + "PhaseOversampling": 0.8, + "ReceiveCoilName": "Spine_32", + "ReceiveCoilActiveElements": "HE3,4;NE1,2;SP1", + "CoilString": "HE3_4;NE1_2;SP1", + "PulseSequenceDetails": "%SiemensSeq%_tse_vfl", + "ConsistencyInfo": "N4_VD13C_LATEST_20121124", + "PercentPhaseFOV": 100, + "EchoTrainLength": 77, + "PhaseEncodingSteps": 431, + "AcquisitionMatrixPE": 320, + "ReconMatrixPE": 320, + "PixelBandwidth": 625, + "DwellTime": 2.5e-06, "ImageOrientationPatientDICOM": [ - 0, - 1, - -2.05103e-10, - 0, - -2.05103e-10, + 0, + 1, + -2.05103e-10, + 0, + -2.05103e-10, -1 - ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181125 GCC4.8.2", - "Dcm2bidsVersion": "2.1.4" + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181125 GCC4.8.2", + "Dcm2bidsVersion": "2.1.4", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-perform01/anat/sub-perform01_flip-1_mt-on_space-other_MTS.json b/derivatives/data_preprocessed/sub-perform01/anat/sub-perform01_flip-1_mt-on_space-other_MTS.json index fe9d1b2af8..6a37a73146 100644 --- a/derivatives/data_preprocessed/sub-perform01/anat/sub-perform01_flip-1_mt-on_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-perform01/anat/sub-perform01_flip-1_mt-on_space-other_MTS.json @@ -1,42 +1,50 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "GE", - "ManufacturersModelName": "DISCOVERY_MR750", - "InstitutionName": "Concordia_University_Perform_Ctr", - "DeviceSerialNumber": "0000000514848MR1", - "StationName": "GEMR750", - "BodyPartExamined": "NECK", - "PatientPosition": "HFS", - "SoftwareVersions": "27_LX_MR_Software_release:DV25.1_R02_1649.a", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-MT1", - "ProtocolName": "GRE-MT1", - "ScanningSequence": "GR", - "SequenceVariant": "SS_SP", - "ScanOptions": "EDR_GEMS_MT_GEMS_FILTERED_GEMS_PFF", - "ImageType": ["ORIGINAL", "PRIMARY", "OTHER"], - "SeriesNumber": 10, - "AcquisitionTime": "10:41:49.000000", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SpacingBetweenSlices": 5, - "SAR": 2.75654, - "EchoTime": 0.004, - "RepetitionTime": 0.035, - "FlipAngle": 9, - "PercentPhaseFOV": 100, - "AcquisitionMatrixPE": 192, - "ReconMatrixPE": 230, - "PixelBandwidth": 362.348, - "ImageOrientationPatientDICOM": [ - 0.9998, - 0.0200121, - 0.000407108, - -0.0198678, - 0.98971, - 0.141699 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "GE", + "ManufacturersModelName": "DISCOVERY_MR750", + "InstitutionName": "Concordia_University_Perform_Ctr", + "DeviceSerialNumber": "0000000514848MR1", + "StationName": "GEMR750", + "BodyPartExamined": "NECK", + "PatientPosition": "HFS", + "SoftwareVersions": "27_LX_MR_Software_release:DV25.1_R02_1649.a", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-MT1", + "ProtocolName": "GRE-MT1", + "ScanningSequence": "GR", + "SequenceVariant": "SS_SP", + "ScanOptions": "EDR_GEMS_MT_GEMS_FILTERED_GEMS_PFF", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "OTHER" + ], + "SeriesNumber": 10, + "AcquisitionTime": "10:41:49.000000", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SpacingBetweenSlices": 5, + "SAR": 2.75654, + "EchoTime": 0.004, + "RepetitionTime": 0.035, + "FlipAngle": 9, + "PercentPhaseFOV": 100, + "AcquisitionMatrixPE": 192, + "ReconMatrixPE": 230, + "PixelBandwidth": 362.348, + "ImageOrientationPatientDICOM": [ + 0.9998, + 0.0200121, + 0.000407108, + -0.0198678, + 0.98971, + 0.141699 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-perform01/anat/sub-perform01_flip-2_mt-off_space-other_MTS.json b/derivatives/data_preprocessed/sub-perform01/anat/sub-perform01_flip-2_mt-off_space-other_MTS.json index bc11100e31..570a31e186 100644 --- a/derivatives/data_preprocessed/sub-perform01/anat/sub-perform01_flip-2_mt-off_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-perform01/anat/sub-perform01_flip-2_mt-off_space-other_MTS.json @@ -1,42 +1,50 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "GE", - "ManufacturersModelName": "DISCOVERY_MR750", - "InstitutionName": "Concordia_University_Perform_Ctr", - "DeviceSerialNumber": "0000000514848MR1", - "StationName": "GEMR750", - "BodyPartExamined": "NECK", - "PatientPosition": "HFS", - "SoftwareVersions": "27_LX_MR_Software_release:DV25.1_R02_1649.a", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-T1w", - "ProtocolName": "GRE-T1w", - "ScanningSequence": "GR", - "SequenceVariant": "SS_SP", - "ScanOptions": "EDR_GEMS_FILTERED_GEMS_PFF", - "ImageType": ["ORIGINAL", "PRIMARY", "OTHER"], - "SeriesNumber": 12, - "AcquisitionTime": "10:49:51.000000", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SpacingBetweenSlices": 5, - "SAR": 0.0440453, - "EchoTime": 0.004, - "RepetitionTime": 0.015, - "FlipAngle": 15, - "PercentPhaseFOV": 100, - "AcquisitionMatrixPE": 192, - "ReconMatrixPE": 230, - "PixelBandwidth": 362.348, - "ImageOrientationPatientDICOM": [ - 0.9998, - 0.0200121, - 0.000407108, - -0.0198678, - 0.98971, - 0.141699 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "GE", + "ManufacturersModelName": "DISCOVERY_MR750", + "InstitutionName": "Concordia_University_Perform_Ctr", + "DeviceSerialNumber": "0000000514848MR1", + "StationName": "GEMR750", + "BodyPartExamined": "NECK", + "PatientPosition": "HFS", + "SoftwareVersions": "27_LX_MR_Software_release:DV25.1_R02_1649.a", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-T1w", + "ProtocolName": "GRE-T1w", + "ScanningSequence": "GR", + "SequenceVariant": "SS_SP", + "ScanOptions": "EDR_GEMS_FILTERED_GEMS_PFF", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "OTHER" + ], + "SeriesNumber": 12, + "AcquisitionTime": "10:49:51.000000", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SpacingBetweenSlices": 5, + "SAR": 0.0440453, + "EchoTime": 0.004, + "RepetitionTime": 0.015, + "FlipAngle": 15, + "PercentPhaseFOV": 100, + "AcquisitionMatrixPE": 192, + "ReconMatrixPE": 230, + "PixelBandwidth": 362.348, + "ImageOrientationPatientDICOM": [ + 0.9998, + 0.0200121, + 0.000407108, + -0.0198678, + 0.98971, + 0.141699 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-perform01/anat/sub-perform01_space-other_T1w.json b/derivatives/data_preprocessed/sub-perform01/anat/sub-perform01_space-other_T1w.json index f611b56fe8..c933c4de84 100644 --- a/derivatives/data_preprocessed/sub-perform01/anat/sub-perform01_space-other_T1w.json +++ b/derivatives/data_preprocessed/sub-perform01/anat/sub-perform01_space-other_T1w.json @@ -1,43 +1,52 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "GE", - "ManufacturersModelName": "DISCOVERY_MR750", - "InstitutionName": "Concordia_University_Perform_Ctr", - "DeviceSerialNumber": "0000000514848MR1", - "StationName": "GEMR750", - "BodyPartExamined": "CSPINE", - "PatientPosition": "HFS", - "SoftwareVersions": "27_LX_MR_Software_release:DV25.1_R02_1649.a", - "MRAcquisitionType": "3D", - "SeriesDescription": "T1w", - "ProtocolName": "T1w", - "ScanningSequence": "GR", - "SequenceVariant": "SS_SP_SK", - "ScanOptions": "FAST_GEMS_EDR_GEMS_FILTERED_GEMS_ACC_GEMS_PFF", - "ImageType": ["ORIGINAL", "PRIMARY", "OTHER"], - "SeriesNumber": 6, - "AcquisitionTime": "10:20:24.000000", - "AcquisitionNumber": 1, - "SliceThickness": 1, - "SpacingBetweenSlices": 1, - "SAR": 0.659945, - "EchoTime": 0.001188, - "RepetitionTime": 0.003044, - "InversionTime": 1, - "FlipAngle": 9, - "PercentPhaseFOV": 80, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 320, - "PixelBandwidth": 892.875, - "ImageOrientationPatientDICOM": [ - -0, - 1, - 0, - -0, - -0, - -1 ], - "InPlanePhaseEncodingDirectionDICOM": "ROW", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "GE", + "ManufacturersModelName": "DISCOVERY_MR750", + "InstitutionName": "Concordia_University_Perform_Ctr", + "DeviceSerialNumber": "0000000514848MR1", + "StationName": "GEMR750", + "BodyPartExamined": "CSPINE", + "PatientPosition": "HFS", + "SoftwareVersions": "27_LX_MR_Software_release:DV25.1_R02_1649.a", + "MRAcquisitionType": "3D", + "SeriesDescription": "T1w", + "ProtocolName": "T1w", + "ScanningSequence": "GR", + "SequenceVariant": "SS_SP_SK", + "ScanOptions": "FAST_GEMS_EDR_GEMS_FILTERED_GEMS_ACC_GEMS_PFF", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "OTHER" + ], + "SeriesNumber": 6, + "AcquisitionTime": "10:20:24.000000", + "AcquisitionNumber": 1, + "SliceThickness": 1, + "SpacingBetweenSlices": 1, + "SAR": 0.659945, + "EchoTime": 0.001188, + "RepetitionTime": 0.003044, + "InversionTime": 1, + "FlipAngle": 9, + "PercentPhaseFOV": 80, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 320, + "PixelBandwidth": 892.875, + "ImageOrientationPatientDICOM": [ + 0, + 1, + 0, + 0, + 0, + -1 + ], + "InPlanePhaseEncodingDirectionDICOM": "ROW", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-perform01/anat/sub-perform01_space-other_T2star.json b/derivatives/data_preprocessed/sub-perform01/anat/sub-perform01_space-other_T2star.json index ada7cc2dda..e4d283ba84 100644 --- a/derivatives/data_preprocessed/sub-perform01/anat/sub-perform01_space-other_T2star.json +++ b/derivatives/data_preprocessed/sub-perform01/anat/sub-perform01_space-other_T2star.json @@ -46,5 +46,9 @@ "InPlanePhaseEncodingDirectionDICOM": "ROW", "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0", - "AcquisitionDuration": 288.0 + "AcquisitionDuration": 288.0, + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-perform01/anat/sub-perform01_space-other_T2w.json b/derivatives/data_preprocessed/sub-perform01/anat/sub-perform01_space-other_T2w.json index f7e3d75c3f..37fde01202 100644 --- a/derivatives/data_preprocessed/sub-perform01/anat/sub-perform01_space-other_T2w.json +++ b/derivatives/data_preprocessed/sub-perform01/anat/sub-perform01_space-other_T2w.json @@ -1,43 +1,52 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "GE", - "ManufacturersModelName": "DISCOVERY_MR750", - "InstitutionName": "Concordia_University_Perform_Ctr", - "DeviceSerialNumber": "0000000514848MR1", - "StationName": "GEMR750", - "BodyPartExamined": "CSPINE", - "PatientPosition": "HFS", - "SoftwareVersions": "27_LX_MR_Software_release:DV25.1_R02_1649.a", - "MRAcquisitionType": "3D", - "SeriesDescription": "T2w", - "ProtocolName": "T2w", - "ScanningSequence": "SE", - "SequenceVariant": "SK_OSP", - "ScanOptions": "FC_FREQ_AX_GEMS_FC_NPW_EDR_GEMS_FILTERED_GEMS_ACC_GEMS", - "ImageType": ["ORIGINAL", "PRIMARY", "OTHER"], - "SeriesNumber": 7, - "AcquisitionTime": "10:26:9.000000", - "AcquisitionNumber": 1, - "SliceThickness": 0.8, - "SpacingBetweenSlices": 0.8, - "SAR": 1.24608, - "EchoTime": 0.134698, - "RepetitionTime": 2.5, - "FlipAngle": 90, - "PercentPhaseFOV": 100, - "EchoTrainLength": 78, - "AcquisitionMatrixPE": 320, - "ReconMatrixPE": 320, - "PixelBandwidth": 520.812, - "ImageOrientationPatientDICOM": [ - -0, - 1, - 0, - -0, - -0, - -1 ], - "InPlanePhaseEncodingDirectionDICOM": "ROW", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "GE", + "ManufacturersModelName": "DISCOVERY_MR750", + "InstitutionName": "Concordia_University_Perform_Ctr", + "DeviceSerialNumber": "0000000514848MR1", + "StationName": "GEMR750", + "BodyPartExamined": "CSPINE", + "PatientPosition": "HFS", + "SoftwareVersions": "27_LX_MR_Software_release:DV25.1_R02_1649.a", + "MRAcquisitionType": "3D", + "SeriesDescription": "T2w", + "ProtocolName": "T2w", + "ScanningSequence": "SE", + "SequenceVariant": "SK_OSP", + "ScanOptions": "FC_FREQ_AX_GEMS_FC_NPW_EDR_GEMS_FILTERED_GEMS_ACC_GEMS", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "OTHER" + ], + "SeriesNumber": 7, + "AcquisitionTime": "10:26:9.000000", + "AcquisitionNumber": 1, + "SliceThickness": 0.8, + "SpacingBetweenSlices": 0.8, + "SAR": 1.24608, + "EchoTime": 0.134698, + "RepetitionTime": 2.5, + "FlipAngle": 90, + "PercentPhaseFOV": 100, + "EchoTrainLength": 78, + "AcquisitionMatrixPE": 320, + "ReconMatrixPE": 320, + "PixelBandwidth": 520.812, + "ImageOrientationPatientDICOM": [ + 0, + 1, + 0, + 0, + 0, + -1 + ], + "InPlanePhaseEncodingDirectionDICOM": "ROW", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-perform02/anat/sub-perform02_flip-1_mt-on_space-other_MTS.json b/derivatives/data_preprocessed/sub-perform02/anat/sub-perform02_flip-1_mt-on_space-other_MTS.json index 38f847d014..992b021843 100644 --- a/derivatives/data_preprocessed/sub-perform02/anat/sub-perform02_flip-1_mt-on_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-perform02/anat/sub-perform02_flip-1_mt-on_space-other_MTS.json @@ -1,42 +1,50 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "GE", - "ManufacturersModelName": "DISCOVERY_MR750", - "InstitutionName": "Concordia_University_Perform_Ctr", - "DeviceSerialNumber": "0000000514848MR1", - "StationName": "GEMR750", - "BodyPartExamined": "NECK", - "PatientPosition": "HFS", - "SoftwareVersions": "27_LX_MR_Software_release:DV25.1_R02_1649.a", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-MT1", - "ProtocolName": "GRE-MT1", - "ScanningSequence": "GR", - "SequenceVariant": "SS_SP", - "ScanOptions": "EDR_GEMS_MT_GEMS_FILTERED_GEMS_PFF", - "ImageType": ["ORIGINAL", "PRIMARY", "OTHER"], - "SeriesNumber": 7, - "AcquisitionTime": "11:22:8.000000", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SpacingBetweenSlices": 5, - "SAR": 2.87395, - "EchoTime": 0.004, - "RepetitionTime": 0.035, - "FlipAngle": 9, - "PercentPhaseFOV": 100, - "AcquisitionMatrixPE": 192, - "ReconMatrixPE": 230, - "PixelBandwidth": 362.348, - "ImageOrientationPatientDICOM": [ - 0.9998, - 0.0200158, - 0.000144005, - -0.0198681, - 0.991486, - 0.128686 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "GE", + "ManufacturersModelName": "DISCOVERY_MR750", + "InstitutionName": "Concordia_University_Perform_Ctr", + "DeviceSerialNumber": "0000000514848MR1", + "StationName": "GEMR750", + "BodyPartExamined": "NECK", + "PatientPosition": "HFS", + "SoftwareVersions": "27_LX_MR_Software_release:DV25.1_R02_1649.a", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-MT1", + "ProtocolName": "GRE-MT1", + "ScanningSequence": "GR", + "SequenceVariant": "SS_SP", + "ScanOptions": "EDR_GEMS_MT_GEMS_FILTERED_GEMS_PFF", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "OTHER" + ], + "SeriesNumber": 7, + "AcquisitionTime": "11:22:8.000000", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SpacingBetweenSlices": 5, + "SAR": 2.87395, + "EchoTime": 0.004, + "RepetitionTime": 0.035, + "FlipAngle": 9, + "PercentPhaseFOV": 100, + "AcquisitionMatrixPE": 192, + "ReconMatrixPE": 230, + "PixelBandwidth": 362.348, + "ImageOrientationPatientDICOM": [ + 0.9998, + 0.0200158, + 0.000144005, + -0.0198681, + 0.991486, + 0.128686 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-perform02/anat/sub-perform02_flip-2_mt-off_space-other_MTS.json b/derivatives/data_preprocessed/sub-perform02/anat/sub-perform02_flip-2_mt-off_space-other_MTS.json index fb19802913..8132846eec 100644 --- a/derivatives/data_preprocessed/sub-perform02/anat/sub-perform02_flip-2_mt-off_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-perform02/anat/sub-perform02_flip-2_mt-off_space-other_MTS.json @@ -1,42 +1,50 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "GE", - "ManufacturersModelName": "DISCOVERY_MR750", - "InstitutionName": "Concordia_University_Perform_Ctr", - "DeviceSerialNumber": "0000000514848MR1", - "StationName": "GEMR750", - "BodyPartExamined": "NECK", - "PatientPosition": "HFS", - "SoftwareVersions": "27_LX_MR_Software_release:DV25.1_R02_1649.a", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-T1w", - "ProtocolName": "GRE-T1w", - "ScanningSequence": "GR", - "SequenceVariant": "SS_SP", - "ScanOptions": "EDR_GEMS_FILTERED_GEMS_PFF", - "ImageType": ["ORIGINAL", "PRIMARY", "OTHER"], - "SeriesNumber": 9, - "AcquisitionTime": "11:29:54.000000", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SpacingBetweenSlices": 5, - "SAR": 0.0459214, - "EchoTime": 0.004, - "RepetitionTime": 0.015, - "FlipAngle": 15, - "PercentPhaseFOV": 100, - "AcquisitionMatrixPE": 192, - "ReconMatrixPE": 230, - "PixelBandwidth": 362.348, - "ImageOrientationPatientDICOM": [ - 0.9998, - 0.0200158, - 0.000144005, - -0.0198681, - 0.991486, - 0.128686 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "GE", + "ManufacturersModelName": "DISCOVERY_MR750", + "InstitutionName": "Concordia_University_Perform_Ctr", + "DeviceSerialNumber": "0000000514848MR1", + "StationName": "GEMR750", + "BodyPartExamined": "NECK", + "PatientPosition": "HFS", + "SoftwareVersions": "27_LX_MR_Software_release:DV25.1_R02_1649.a", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-T1w", + "ProtocolName": "GRE-T1w", + "ScanningSequence": "GR", + "SequenceVariant": "SS_SP", + "ScanOptions": "EDR_GEMS_FILTERED_GEMS_PFF", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "OTHER" + ], + "SeriesNumber": 9, + "AcquisitionTime": "11:29:54.000000", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SpacingBetweenSlices": 5, + "SAR": 0.0459214, + "EchoTime": 0.004, + "RepetitionTime": 0.015, + "FlipAngle": 15, + "PercentPhaseFOV": 100, + "AcquisitionMatrixPE": 192, + "ReconMatrixPE": 230, + "PixelBandwidth": 362.348, + "ImageOrientationPatientDICOM": [ + 0.9998, + 0.0200158, + 0.000144005, + -0.0198681, + 0.991486, + 0.128686 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-perform02/anat/sub-perform02_space-other_T1w.json b/derivatives/data_preprocessed/sub-perform02/anat/sub-perform02_space-other_T1w.json index e1ac5e72ba..5123386cf8 100644 --- a/derivatives/data_preprocessed/sub-perform02/anat/sub-perform02_space-other_T1w.json +++ b/derivatives/data_preprocessed/sub-perform02/anat/sub-perform02_space-other_T1w.json @@ -1,43 +1,52 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "GE", - "ManufacturersModelName": "DISCOVERY_MR750", - "InstitutionName": "Concordia_University_Perform_Ctr", - "DeviceSerialNumber": "0000000514848MR1", - "StationName": "GEMR750", - "BodyPartExamined": "CSPINE", - "PatientPosition": "HFS", - "SoftwareVersions": "27_LX_MR_Software_release:DV25.1_R02_1649.a", - "MRAcquisitionType": "3D", - "SeriesDescription": "T1w", - "ProtocolName": "T1w", - "ScanningSequence": "GR", - "SequenceVariant": "SS_SP_SK", - "ScanOptions": "FAST_GEMS_EDR_GEMS_FILTERED_GEMS_ACC_GEMS_PFF", - "ImageType": ["ORIGINAL", "PRIMARY", "OTHER"], - "SeriesNumber": 4, - "AcquisitionTime": "11:06:11.000000", - "AcquisitionNumber": 1, - "SliceThickness": 1, - "SpacingBetweenSlices": 1, - "SAR": 0.651669, - "EchoTime": 0.001204, - "RepetitionTime": 0.003084, - "InversionTime": 1, - "FlipAngle": 9, - "PercentPhaseFOV": 80, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 320, - "PixelBandwidth": 892.875, - "ImageOrientationPatientDICOM": [ - -0, - 1, - 0, - -0, - -0, - -1 ], - "InPlanePhaseEncodingDirectionDICOM": "ROW", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "GE", + "ManufacturersModelName": "DISCOVERY_MR750", + "InstitutionName": "Concordia_University_Perform_Ctr", + "DeviceSerialNumber": "0000000514848MR1", + "StationName": "GEMR750", + "BodyPartExamined": "CSPINE", + "PatientPosition": "HFS", + "SoftwareVersions": "27_LX_MR_Software_release:DV25.1_R02_1649.a", + "MRAcquisitionType": "3D", + "SeriesDescription": "T1w", + "ProtocolName": "T1w", + "ScanningSequence": "GR", + "SequenceVariant": "SS_SP_SK", + "ScanOptions": "FAST_GEMS_EDR_GEMS_FILTERED_GEMS_ACC_GEMS_PFF", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "OTHER" + ], + "SeriesNumber": 4, + "AcquisitionTime": "11:06:11.000000", + "AcquisitionNumber": 1, + "SliceThickness": 1, + "SpacingBetweenSlices": 1, + "SAR": 0.651669, + "EchoTime": 0.001204, + "RepetitionTime": 0.003084, + "InversionTime": 1, + "FlipAngle": 9, + "PercentPhaseFOV": 80, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 320, + "PixelBandwidth": 892.875, + "ImageOrientationPatientDICOM": [ + 0, + 1, + 0, + 0, + 0, + -1 + ], + "InPlanePhaseEncodingDirectionDICOM": "ROW", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-perform02/anat/sub-perform02_space-other_T2star.json b/derivatives/data_preprocessed/sub-perform02/anat/sub-perform02_space-other_T2star.json index 4842941a83..c49d8baec7 100644 --- a/derivatives/data_preprocessed/sub-perform02/anat/sub-perform02_space-other_T2star.json +++ b/derivatives/data_preprocessed/sub-perform02/anat/sub-perform02_space-other_T2star.json @@ -46,5 +46,9 @@ "InPlanePhaseEncodingDirectionDICOM": "ROW", "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0", - "AcquisitionDuration": 288.0 + "AcquisitionDuration": 288.0, + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-perform02/anat/sub-perform02_space-other_T2w.json b/derivatives/data_preprocessed/sub-perform02/anat/sub-perform02_space-other_T2w.json index 52c7fda0f1..5435d6c503 100644 --- a/derivatives/data_preprocessed/sub-perform02/anat/sub-perform02_space-other_T2w.json +++ b/derivatives/data_preprocessed/sub-perform02/anat/sub-perform02_space-other_T2w.json @@ -1,43 +1,52 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "GE", - "ManufacturersModelName": "DISCOVERY_MR750", - "InstitutionName": "Concordia_University_Perform_Ctr", - "DeviceSerialNumber": "0000000514848MR1", - "StationName": "GEMR750", - "BodyPartExamined": "CSPINE", - "PatientPosition": "HFS", - "SoftwareVersions": "27_LX_MR_Software_release:DV25.1_R02_1649.a", - "MRAcquisitionType": "3D", - "SeriesDescription": "T2w", - "ProtocolName": "T2w", - "ScanningSequence": "SE", - "SequenceVariant": "SK_OSP", - "ScanOptions": "FC_FREQ_AX_GEMS_FC_NPW_EDR_GEMS_FILTERED_GEMS_ACC_GEMS", - "ImageType": ["ORIGINAL", "PRIMARY", "OTHER"], - "SeriesNumber": 5, - "AcquisitionTime": "11:11:42.000000", - "AcquisitionNumber": 1, - "SliceThickness": 0.8, - "SpacingBetweenSlices": 0.8, - "SAR": 0.987155, - "EchoTime": 0.135555, - "RepetitionTime": 2.5, - "FlipAngle": 90, - "PercentPhaseFOV": 100, - "EchoTrainLength": 78, - "AcquisitionMatrixPE": 320, - "ReconMatrixPE": 320, - "PixelBandwidth": 520.812, - "ImageOrientationPatientDICOM": [ - -0, - 1, - 0, - -0, - -0, - -1 ], - "InPlanePhaseEncodingDirectionDICOM": "ROW", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "GE", + "ManufacturersModelName": "DISCOVERY_MR750", + "InstitutionName": "Concordia_University_Perform_Ctr", + "DeviceSerialNumber": "0000000514848MR1", + "StationName": "GEMR750", + "BodyPartExamined": "CSPINE", + "PatientPosition": "HFS", + "SoftwareVersions": "27_LX_MR_Software_release:DV25.1_R02_1649.a", + "MRAcquisitionType": "3D", + "SeriesDescription": "T2w", + "ProtocolName": "T2w", + "ScanningSequence": "SE", + "SequenceVariant": "SK_OSP", + "ScanOptions": "FC_FREQ_AX_GEMS_FC_NPW_EDR_GEMS_FILTERED_GEMS_ACC_GEMS", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "OTHER" + ], + "SeriesNumber": 5, + "AcquisitionTime": "11:11:42.000000", + "AcquisitionNumber": 1, + "SliceThickness": 0.8, + "SpacingBetweenSlices": 0.8, + "SAR": 0.987155, + "EchoTime": 0.135555, + "RepetitionTime": 2.5, + "FlipAngle": 90, + "PercentPhaseFOV": 100, + "EchoTrainLength": 78, + "AcquisitionMatrixPE": 320, + "ReconMatrixPE": 320, + "PixelBandwidth": 520.812, + "ImageOrientationPatientDICOM": [ + 0, + 1, + 0, + 0, + 0, + -1 + ], + "InPlanePhaseEncodingDirectionDICOM": "ROW", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-perform03/anat/sub-perform03_flip-1_mt-on_space-other_MTS.json b/derivatives/data_preprocessed/sub-perform03/anat/sub-perform03_flip-1_mt-on_space-other_MTS.json index e7d1b07def..8f200d99b8 100644 --- a/derivatives/data_preprocessed/sub-perform03/anat/sub-perform03_flip-1_mt-on_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-perform03/anat/sub-perform03_flip-1_mt-on_space-other_MTS.json @@ -1,42 +1,50 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "GE", - "ManufacturersModelName": "DISCOVERY_MR750", - "InstitutionName": "Concordia_University_Perform_Ctr", - "DeviceSerialNumber": "0000000514848MR1", - "StationName": "GEMR750", - "BodyPartExamined": "NECK", - "PatientPosition": "HFS", - "SoftwareVersions": "27_LX_MR_Software_release:DV25.1_R02_1649.a", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-MT1", - "ProtocolName": "GRE-MT1", - "ScanningSequence": "GR", - "SequenceVariant": "SS_SP", - "ScanOptions": "EDR_GEMS_MT_GEMS_FILTERED_GEMS_PFF", - "ImageType": ["ORIGINAL", "PRIMARY", "OTHER"], - "SeriesNumber": 9, - "AcquisitionTime": "12:09:46.000000", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SpacingBetweenSlices": 5, - "SAR": 2.73623, - "EchoTime": 0.004, - "RepetitionTime": 0.035, - "FlipAngle": 9, - "PercentPhaseFOV": 100, - "AcquisitionMatrixPE": 192, - "ReconMatrixPE": 230, - "PixelBandwidth": 362.348, - "ImageOrientationPatientDICOM": [ - 0.998888, - 0.0227988, - 0.0412691, - -0.0253259, - 0.997768, - 0.0617866 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "GE", + "ManufacturersModelName": "DISCOVERY_MR750", + "InstitutionName": "Concordia_University_Perform_Ctr", + "DeviceSerialNumber": "0000000514848MR1", + "StationName": "GEMR750", + "BodyPartExamined": "NECK", + "PatientPosition": "HFS", + "SoftwareVersions": "27_LX_MR_Software_release:DV25.1_R02_1649.a", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-MT1", + "ProtocolName": "GRE-MT1", + "ScanningSequence": "GR", + "SequenceVariant": "SS_SP", + "ScanOptions": "EDR_GEMS_MT_GEMS_FILTERED_GEMS_PFF", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "OTHER" + ], + "SeriesNumber": 9, + "AcquisitionTime": "12:09:46.000000", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SpacingBetweenSlices": 5, + "SAR": 2.73623, + "EchoTime": 0.004, + "RepetitionTime": 0.035, + "FlipAngle": 9, + "PercentPhaseFOV": 100, + "AcquisitionMatrixPE": 192, + "ReconMatrixPE": 230, + "PixelBandwidth": 362.348, + "ImageOrientationPatientDICOM": [ + 0.998888, + 0.0227988, + 0.0412691, + -0.0253259, + 0.997768, + 0.0617866 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-perform03/anat/sub-perform03_flip-2_mt-off_space-other_MTS.json b/derivatives/data_preprocessed/sub-perform03/anat/sub-perform03_flip-2_mt-off_space-other_MTS.json index 74286ace4e..fb4c2d4bbe 100644 --- a/derivatives/data_preprocessed/sub-perform03/anat/sub-perform03_flip-2_mt-off_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-perform03/anat/sub-perform03_flip-2_mt-off_space-other_MTS.json @@ -1,42 +1,50 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "GE", - "ManufacturersModelName": "DISCOVERY_MR750", - "InstitutionName": "Concordia_University_Perform_Ctr", - "DeviceSerialNumber": "0000000514848MR1", - "StationName": "GEMR750", - "BodyPartExamined": "NECK", - "PatientPosition": "HFS", - "SoftwareVersions": "27_LX_MR_Software_release:DV25.1_R02_1649.a", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-T1w", - "ProtocolName": "GRE-T1w", - "ScanningSequence": "GR", - "SequenceVariant": "SS_SP", - "ScanOptions": "EDR_GEMS_FILTERED_GEMS_PFF", - "ImageType": ["ORIGINAL", "PRIMARY", "OTHER"], - "SeriesNumber": 11, - "AcquisitionTime": "12:17:13.000000", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SpacingBetweenSlices": 5, - "SAR": 0.0437208, - "EchoTime": 0.004, - "RepetitionTime": 0.015, - "FlipAngle": 15, - "PercentPhaseFOV": 100, - "AcquisitionMatrixPE": 192, - "ReconMatrixPE": 230, - "PixelBandwidth": 362.348, - "ImageOrientationPatientDICOM": [ - 0.998888, - 0.0227988, - 0.0412691, - -0.0253259, - 0.997768, - 0.0617866 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "GE", + "ManufacturersModelName": "DISCOVERY_MR750", + "InstitutionName": "Concordia_University_Perform_Ctr", + "DeviceSerialNumber": "0000000514848MR1", + "StationName": "GEMR750", + "BodyPartExamined": "NECK", + "PatientPosition": "HFS", + "SoftwareVersions": "27_LX_MR_Software_release:DV25.1_R02_1649.a", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-T1w", + "ProtocolName": "GRE-T1w", + "ScanningSequence": "GR", + "SequenceVariant": "SS_SP", + "ScanOptions": "EDR_GEMS_FILTERED_GEMS_PFF", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "OTHER" + ], + "SeriesNumber": 11, + "AcquisitionTime": "12:17:13.000000", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SpacingBetweenSlices": 5, + "SAR": 0.0437208, + "EchoTime": 0.004, + "RepetitionTime": 0.015, + "FlipAngle": 15, + "PercentPhaseFOV": 100, + "AcquisitionMatrixPE": 192, + "ReconMatrixPE": 230, + "PixelBandwidth": 362.348, + "ImageOrientationPatientDICOM": [ + 0.998888, + 0.0227988, + 0.0412691, + -0.0253259, + 0.997768, + 0.0617866 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-perform03/anat/sub-perform03_space-other_T1w.json b/derivatives/data_preprocessed/sub-perform03/anat/sub-perform03_space-other_T1w.json index a5dceb26ea..be10de6636 100644 --- a/derivatives/data_preprocessed/sub-perform03/anat/sub-perform03_space-other_T1w.json +++ b/derivatives/data_preprocessed/sub-perform03/anat/sub-perform03_space-other_T1w.json @@ -1,43 +1,52 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "GE", - "ManufacturersModelName": "DISCOVERY_MR750", - "InstitutionName": "Concordia_University_Perform_Ctr", - "DeviceSerialNumber": "0000000514848MR1", - "StationName": "GEMR750", - "BodyPartExamined": "CSPINE", - "PatientPosition": "HFS", - "SoftwareVersions": "27_LX_MR_Software_release:DV25.1_R02_1649.a", - "MRAcquisitionType": "3D", - "SeriesDescription": "T1w", - "ProtocolName": "T1w", - "ScanningSequence": "GR", - "SequenceVariant": "SS_SP_SK", - "ScanOptions": "FAST_GEMS_EDR_GEMS_FILTERED_GEMS_ACC_GEMS_PFF", - "ImageType": ["ORIGINAL", "PRIMARY", "OTHER"], - "SeriesNumber": 5, - "AcquisitionTime": "11:51:41.000000", - "AcquisitionNumber": 1, - "SliceThickness": 1, - "SpacingBetweenSlices": 1, - "SAR": 0.655769, - "EchoTime": 0.001188, - "RepetitionTime": 0.003044, - "InversionTime": 1, - "FlipAngle": 9, - "PercentPhaseFOV": 80, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 512, - "PixelBandwidth": 558.047, - "ImageOrientationPatientDICOM": [ - -0, - 1, - 0, - -0, - -0, - -1 ], - "InPlanePhaseEncodingDirectionDICOM": "ROW", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "GE", + "ManufacturersModelName": "DISCOVERY_MR750", + "InstitutionName": "Concordia_University_Perform_Ctr", + "DeviceSerialNumber": "0000000514848MR1", + "StationName": "GEMR750", + "BodyPartExamined": "CSPINE", + "PatientPosition": "HFS", + "SoftwareVersions": "27_LX_MR_Software_release:DV25.1_R02_1649.a", + "MRAcquisitionType": "3D", + "SeriesDescription": "T1w", + "ProtocolName": "T1w", + "ScanningSequence": "GR", + "SequenceVariant": "SS_SP_SK", + "ScanOptions": "FAST_GEMS_EDR_GEMS_FILTERED_GEMS_ACC_GEMS_PFF", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "OTHER" + ], + "SeriesNumber": 5, + "AcquisitionTime": "11:51:41.000000", + "AcquisitionNumber": 1, + "SliceThickness": 1, + "SpacingBetweenSlices": 1, + "SAR": 0.655769, + "EchoTime": 0.001188, + "RepetitionTime": 0.003044, + "InversionTime": 1, + "FlipAngle": 9, + "PercentPhaseFOV": 80, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 512, + "PixelBandwidth": 558.047, + "ImageOrientationPatientDICOM": [ + 0, + 1, + 0, + 0, + 0, + -1 + ], + "InPlanePhaseEncodingDirectionDICOM": "ROW", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-perform03/anat/sub-perform03_space-other_T2star.json b/derivatives/data_preprocessed/sub-perform03/anat/sub-perform03_space-other_T2star.json index c8be2d4799..05378a8a8f 100644 --- a/derivatives/data_preprocessed/sub-perform03/anat/sub-perform03_space-other_T2star.json +++ b/derivatives/data_preprocessed/sub-perform03/anat/sub-perform03_space-other_T2star.json @@ -46,5 +46,9 @@ "InPlanePhaseEncodingDirectionDICOM": "ROW", "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0", - "AcquisitionDuration": 288.0 + "AcquisitionDuration": 288.0, + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-perform03/anat/sub-perform03_space-other_T2w.json b/derivatives/data_preprocessed/sub-perform03/anat/sub-perform03_space-other_T2w.json index 3d157f764b..549ebb42df 100644 --- a/derivatives/data_preprocessed/sub-perform03/anat/sub-perform03_space-other_T2w.json +++ b/derivatives/data_preprocessed/sub-perform03/anat/sub-perform03_space-other_T2w.json @@ -1,43 +1,52 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "GE", - "ManufacturersModelName": "DISCOVERY_MR750", - "InstitutionName": "Concordia_University_Perform_Ctr", - "DeviceSerialNumber": "0000000514848MR1", - "StationName": "GEMR750", - "BodyPartExamined": "CSPINE", - "PatientPosition": "HFS", - "SoftwareVersions": "27_LX_MR_Software_release:DV25.1_R02_1649.a", - "MRAcquisitionType": "3D", - "SeriesDescription": "T2w", - "ProtocolName": "T2w", - "ScanningSequence": "SE", - "SequenceVariant": "SK_OSP", - "ScanOptions": "FC_FREQ_AX_GEMS_FC_NPW_EDR_GEMS_FILTERED_GEMS_ACC_GEMS", - "ImageType": ["ORIGINAL", "PRIMARY", "OTHER"], - "SeriesNumber": 6, - "AcquisitionTime": "11:57:49.000000", - "AcquisitionNumber": 1, - "SliceThickness": 0.8, - "SpacingBetweenSlices": 0.8, - "SAR": 1.30509, - "EchoTime": 0.136222, - "RepetitionTime": 2.5, - "FlipAngle": 90, - "PercentPhaseFOV": 100, - "EchoTrainLength": 78, - "AcquisitionMatrixPE": 320, - "ReconMatrixPE": 320, - "PixelBandwidth": 520.812, - "ImageOrientationPatientDICOM": [ - -0, - 1, - 0, - -0, - -0, - -1 ], - "InPlanePhaseEncodingDirectionDICOM": "ROW", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "GE", + "ManufacturersModelName": "DISCOVERY_MR750", + "InstitutionName": "Concordia_University_Perform_Ctr", + "DeviceSerialNumber": "0000000514848MR1", + "StationName": "GEMR750", + "BodyPartExamined": "CSPINE", + "PatientPosition": "HFS", + "SoftwareVersions": "27_LX_MR_Software_release:DV25.1_R02_1649.a", + "MRAcquisitionType": "3D", + "SeriesDescription": "T2w", + "ProtocolName": "T2w", + "ScanningSequence": "SE", + "SequenceVariant": "SK_OSP", + "ScanOptions": "FC_FREQ_AX_GEMS_FC_NPW_EDR_GEMS_FILTERED_GEMS_ACC_GEMS", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "OTHER" + ], + "SeriesNumber": 6, + "AcquisitionTime": "11:57:49.000000", + "AcquisitionNumber": 1, + "SliceThickness": 0.8, + "SpacingBetweenSlices": 0.8, + "SAR": 1.30509, + "EchoTime": 0.136222, + "RepetitionTime": 2.5, + "FlipAngle": 90, + "PercentPhaseFOV": 100, + "EchoTrainLength": 78, + "AcquisitionMatrixPE": 320, + "ReconMatrixPE": 320, + "PixelBandwidth": 520.812, + "ImageOrientationPatientDICOM": [ + 0, + 1, + 0, + 0, + 0, + -1 + ], + "InPlanePhaseEncodingDirectionDICOM": "ROW", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-perform04/anat/sub-perform04_flip-1_mt-on_space-other_MTS.json b/derivatives/data_preprocessed/sub-perform04/anat/sub-perform04_flip-1_mt-on_space-other_MTS.json index d67076ba2a..62f2ec395f 100644 --- a/derivatives/data_preprocessed/sub-perform04/anat/sub-perform04_flip-1_mt-on_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-perform04/anat/sub-perform04_flip-1_mt-on_space-other_MTS.json @@ -1,42 +1,50 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "GE", - "ManufacturersModelName": "DISCOVERY_MR750", - "InstitutionName": "Concordia_University_Perform_Ctr", - "DeviceSerialNumber": "0000000514848MR1", - "StationName": "GEMR750", - "BodyPartExamined": "NECK", - "PatientPosition": "HFS", - "SoftwareVersions": "27_LX_MR_Software_release:DV25.1_R02_1649.a", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-MT1", - "ProtocolName": "GRE-MT1", - "ScanningSequence": "GR", - "SequenceVariant": "SS_SP", - "ScanOptions": "EDR_GEMS_MT_GEMS_FILTERED_GEMS_PFF", - "ImageType": ["ORIGINAL", "PRIMARY", "OTHER"], - "SeriesNumber": 7, - "AcquisitionTime": "12:50:43.000000", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SpacingBetweenSlices": 5, - "SAR": 2.7078, - "EchoTime": 0.004, - "RepetitionTime": 0.035, - "FlipAngle": 9, - "PercentPhaseFOV": 100, - "AcquisitionMatrixPE": 192, - "ReconMatrixPE": 230, - "PixelBandwidth": 362.348, - "ImageOrientationPatientDICOM": [ - 0.999726, - 0.020444, - 0.0114359, - -0.021656, - 0.99272, - 0.118482 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "GE", + "ManufacturersModelName": "DISCOVERY_MR750", + "InstitutionName": "Concordia_University_Perform_Ctr", + "DeviceSerialNumber": "0000000514848MR1", + "StationName": "GEMR750", + "BodyPartExamined": "NECK", + "PatientPosition": "HFS", + "SoftwareVersions": "27_LX_MR_Software_release:DV25.1_R02_1649.a", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-MT1", + "ProtocolName": "GRE-MT1", + "ScanningSequence": "GR", + "SequenceVariant": "SS_SP", + "ScanOptions": "EDR_GEMS_MT_GEMS_FILTERED_GEMS_PFF", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "OTHER" + ], + "SeriesNumber": 7, + "AcquisitionTime": "12:50:43.000000", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SpacingBetweenSlices": 5, + "SAR": 2.7078, + "EchoTime": 0.004, + "RepetitionTime": 0.035, + "FlipAngle": 9, + "PercentPhaseFOV": 100, + "AcquisitionMatrixPE": 192, + "ReconMatrixPE": 230, + "PixelBandwidth": 362.348, + "ImageOrientationPatientDICOM": [ + 0.999726, + 0.020444, + 0.0114359, + -0.021656, + 0.99272, + 0.118482 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-perform04/anat/sub-perform04_flip-2_mt-off_space-other_MTS.json b/derivatives/data_preprocessed/sub-perform04/anat/sub-perform04_flip-2_mt-off_space-other_MTS.json index 8191f411dc..9d305d18a9 100644 --- a/derivatives/data_preprocessed/sub-perform04/anat/sub-perform04_flip-2_mt-off_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-perform04/anat/sub-perform04_flip-2_mt-off_space-other_MTS.json @@ -1,42 +1,50 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "GE", - "ManufacturersModelName": "DISCOVERY_MR750", - "InstitutionName": "Concordia_University_Perform_Ctr", - "DeviceSerialNumber": "0000000514848MR1", - "StationName": "GEMR750", - "BodyPartExamined": "NECK", - "PatientPosition": "HFS", - "SoftwareVersions": "27_LX_MR_Software_release:DV25.1_R02_1649.a", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-T1w", - "ProtocolName": "GRE-T1w", - "ScanningSequence": "GR", - "SequenceVariant": "SS_SP", - "ScanOptions": "EDR_GEMS_FILTERED_GEMS_PFF", - "ImageType": ["ORIGINAL", "PRIMARY", "OTHER"], - "SeriesNumber": 9, - "AcquisitionTime": "12:58:28.000000", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SpacingBetweenSlices": 5, - "SAR": 0.0432666, - "EchoTime": 0.004, - "RepetitionTime": 0.015, - "FlipAngle": 15, - "PercentPhaseFOV": 100, - "AcquisitionMatrixPE": 192, - "ReconMatrixPE": 230, - "PixelBandwidth": 362.348, - "ImageOrientationPatientDICOM": [ - 0.999726, - 0.020444, - 0.0114359, - -0.021656, - 0.99272, - 0.118482 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "GE", + "ManufacturersModelName": "DISCOVERY_MR750", + "InstitutionName": "Concordia_University_Perform_Ctr", + "DeviceSerialNumber": "0000000514848MR1", + "StationName": "GEMR750", + "BodyPartExamined": "NECK", + "PatientPosition": "HFS", + "SoftwareVersions": "27_LX_MR_Software_release:DV25.1_R02_1649.a", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-T1w", + "ProtocolName": "GRE-T1w", + "ScanningSequence": "GR", + "SequenceVariant": "SS_SP", + "ScanOptions": "EDR_GEMS_FILTERED_GEMS_PFF", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "OTHER" + ], + "SeriesNumber": 9, + "AcquisitionTime": "12:58:28.000000", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SpacingBetweenSlices": 5, + "SAR": 0.0432666, + "EchoTime": 0.004, + "RepetitionTime": 0.015, + "FlipAngle": 15, + "PercentPhaseFOV": 100, + "AcquisitionMatrixPE": 192, + "ReconMatrixPE": 230, + "PixelBandwidth": 362.348, + "ImageOrientationPatientDICOM": [ + 0.999726, + 0.020444, + 0.0114359, + -0.021656, + 0.99272, + 0.118482 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-perform04/anat/sub-perform04_space-other_T1w.json b/derivatives/data_preprocessed/sub-perform04/anat/sub-perform04_space-other_T1w.json index a386894de6..c84d8477ba 100644 --- a/derivatives/data_preprocessed/sub-perform04/anat/sub-perform04_space-other_T1w.json +++ b/derivatives/data_preprocessed/sub-perform04/anat/sub-perform04_space-other_T1w.json @@ -1,43 +1,52 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "GE", - "ManufacturersModelName": "DISCOVERY_MR750", - "InstitutionName": "Concordia_University_Perform_Ctr", - "DeviceSerialNumber": "0000000514848MR1", - "StationName": "GEMR750", - "BodyPartExamined": "CSPINE", - "PatientPosition": "HFS", - "SoftwareVersions": "27_LX_MR_Software_release:DV25.1_R02_1649.a", - "MRAcquisitionType": "3D", - "SeriesDescription": "T1w", - "ProtocolName": "T1w", - "ScanningSequence": "GR", - "SequenceVariant": "SS_SP_SK", - "ScanOptions": "FAST_GEMS_EDR_GEMS_FILTERED_GEMS_ACC_GEMS_PFF", - "ImageType": ["ORIGINAL", "PRIMARY", "OTHER"], - "SeriesNumber": 4, - "AcquisitionTime": "12:32:53.000000", - "AcquisitionNumber": 1, - "SliceThickness": 1, - "SpacingBetweenSlices": 1, - "SAR": 0.649916, - "EchoTime": 0.001188, - "RepetitionTime": 0.003044, - "InversionTime": 1, - "FlipAngle": 9, - "PercentPhaseFOV": 80, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 320, - "PixelBandwidth": 892.875, - "ImageOrientationPatientDICOM": [ - -0, - 1, - 0, - -0, - -0, - -1 ], - "InPlanePhaseEncodingDirectionDICOM": "ROW", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "GE", + "ManufacturersModelName": "DISCOVERY_MR750", + "InstitutionName": "Concordia_University_Perform_Ctr", + "DeviceSerialNumber": "0000000514848MR1", + "StationName": "GEMR750", + "BodyPartExamined": "CSPINE", + "PatientPosition": "HFS", + "SoftwareVersions": "27_LX_MR_Software_release:DV25.1_R02_1649.a", + "MRAcquisitionType": "3D", + "SeriesDescription": "T1w", + "ProtocolName": "T1w", + "ScanningSequence": "GR", + "SequenceVariant": "SS_SP_SK", + "ScanOptions": "FAST_GEMS_EDR_GEMS_FILTERED_GEMS_ACC_GEMS_PFF", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "OTHER" + ], + "SeriesNumber": 4, + "AcquisitionTime": "12:32:53.000000", + "AcquisitionNumber": 1, + "SliceThickness": 1, + "SpacingBetweenSlices": 1, + "SAR": 0.649916, + "EchoTime": 0.001188, + "RepetitionTime": 0.003044, + "InversionTime": 1, + "FlipAngle": 9, + "PercentPhaseFOV": 80, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 320, + "PixelBandwidth": 892.875, + "ImageOrientationPatientDICOM": [ + 0, + 1, + 0, + 0, + 0, + -1 + ], + "InPlanePhaseEncodingDirectionDICOM": "ROW", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-perform04/anat/sub-perform04_space-other_T2star.json b/derivatives/data_preprocessed/sub-perform04/anat/sub-perform04_space-other_T2star.json index ce68568fd8..2f2b45c089 100644 --- a/derivatives/data_preprocessed/sub-perform04/anat/sub-perform04_space-other_T2star.json +++ b/derivatives/data_preprocessed/sub-perform04/anat/sub-perform04_space-other_T2star.json @@ -46,5 +46,9 @@ "InPlanePhaseEncodingDirectionDICOM": "ROW", "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0", - "AcquisitionDuration": 288.0 + "AcquisitionDuration": 288.0, + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-perform04/anat/sub-perform04_space-other_T2w.json b/derivatives/data_preprocessed/sub-perform04/anat/sub-perform04_space-other_T2w.json index 27b209c652..27d74a4f46 100644 --- a/derivatives/data_preprocessed/sub-perform04/anat/sub-perform04_space-other_T2w.json +++ b/derivatives/data_preprocessed/sub-perform04/anat/sub-perform04_space-other_T2w.json @@ -1,43 +1,52 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "GE", - "ManufacturersModelName": "DISCOVERY_MR750", - "InstitutionName": "Concordia_University_Perform_Ctr", - "DeviceSerialNumber": "0000000514848MR1", - "StationName": "GEMR750", - "BodyPartExamined": "CSPINE", - "PatientPosition": "HFS", - "SoftwareVersions": "27_LX_MR_Software_release:DV25.1_R02_1649.a", - "MRAcquisitionType": "3D", - "SeriesDescription": "T2w", - "ProtocolName": "T2w", - "ScanningSequence": "SE", - "SequenceVariant": "SK_OSP", - "ScanOptions": "FC_FREQ_AX_GEMS_FC_NPW_EDR_GEMS_FILTERED_GEMS_ACC_GEMS", - "ImageType": ["ORIGINAL", "PRIMARY", "OTHER"], - "SeriesNumber": 5, - "AcquisitionTime": "12:38:31.000000", - "AcquisitionNumber": 1, - "SliceThickness": 0.8, - "SpacingBetweenSlices": 0.8, - "SAR": 1.38682, - "EchoTime": 0.135691, - "RepetitionTime": 2.5, - "FlipAngle": 90, - "PercentPhaseFOV": 100, - "EchoTrainLength": 78, - "AcquisitionMatrixPE": 320, - "ReconMatrixPE": 320, - "PixelBandwidth": 520.812, - "ImageOrientationPatientDICOM": [ - -0, - 1, - 0, - -0, - -0, - -1 ], - "InPlanePhaseEncodingDirectionDICOM": "ROW", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "GE", + "ManufacturersModelName": "DISCOVERY_MR750", + "InstitutionName": "Concordia_University_Perform_Ctr", + "DeviceSerialNumber": "0000000514848MR1", + "StationName": "GEMR750", + "BodyPartExamined": "CSPINE", + "PatientPosition": "HFS", + "SoftwareVersions": "27_LX_MR_Software_release:DV25.1_R02_1649.a", + "MRAcquisitionType": "3D", + "SeriesDescription": "T2w", + "ProtocolName": "T2w", + "ScanningSequence": "SE", + "SequenceVariant": "SK_OSP", + "ScanOptions": "FC_FREQ_AX_GEMS_FC_NPW_EDR_GEMS_FILTERED_GEMS_ACC_GEMS", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "OTHER" + ], + "SeriesNumber": 5, + "AcquisitionTime": "12:38:31.000000", + "AcquisitionNumber": 1, + "SliceThickness": 0.8, + "SpacingBetweenSlices": 0.8, + "SAR": 1.38682, + "EchoTime": 0.135691, + "RepetitionTime": 2.5, + "FlipAngle": 90, + "PercentPhaseFOV": 100, + "EchoTrainLength": 78, + "AcquisitionMatrixPE": 320, + "ReconMatrixPE": 320, + "PixelBandwidth": 520.812, + "ImageOrientationPatientDICOM": [ + 0, + 1, + 0, + 0, + 0, + -1 + ], + "InPlanePhaseEncodingDirectionDICOM": "ROW", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-perform05/anat/sub-perform05_flip-1_mt-on_space-other_MTS.json b/derivatives/data_preprocessed/sub-perform05/anat/sub-perform05_flip-1_mt-on_space-other_MTS.json index d280902693..1a1abadf82 100644 --- a/derivatives/data_preprocessed/sub-perform05/anat/sub-perform05_flip-1_mt-on_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-perform05/anat/sub-perform05_flip-1_mt-on_space-other_MTS.json @@ -1,42 +1,50 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "GE", - "ManufacturersModelName": "DISCOVERY_MR750", - "InstitutionName": "Concordia_University_Perform_Ctr", - "DeviceSerialNumber": "0000000514848MR1", - "StationName": "GEMR750", - "BodyPartExamined": "NECK", - "PatientPosition": "HFS", - "SoftwareVersions": "27_LX_MR_Software_release:DV25.1_R02_1649.a", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-MT1", - "ProtocolName": "GRE-MT1", - "ScanningSequence": "GR", - "SequenceVariant": "SS_SP", - "ScanOptions": "EDR_GEMS_MT_GEMS_FILTERED_GEMS_PFF", - "ImageType": ["ORIGINAL", "PRIMARY", "OTHER"], - "SeriesNumber": 6, - "AcquisitionTime": "13:32:1.000000", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SpacingBetweenSlices": 5, - "SAR": 2.66979, - "EchoTime": 0.004, - "RepetitionTime": 0.035, - "FlipAngle": 9, - "PercentPhaseFOV": 100, - "AcquisitionMatrixPE": 192, - "ReconMatrixPE": 230, - "PixelBandwidth": 362.348, - "ImageOrientationPatientDICOM": [ - 0.999735, - 0.0227988, - 0.00332293, - -0.0229624, - 0.997768, - 0.0627038 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "GE", + "ManufacturersModelName": "DISCOVERY_MR750", + "InstitutionName": "Concordia_University_Perform_Ctr", + "DeviceSerialNumber": "0000000514848MR1", + "StationName": "GEMR750", + "BodyPartExamined": "NECK", + "PatientPosition": "HFS", + "SoftwareVersions": "27_LX_MR_Software_release:DV25.1_R02_1649.a", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-MT1", + "ProtocolName": "GRE-MT1", + "ScanningSequence": "GR", + "SequenceVariant": "SS_SP", + "ScanOptions": "EDR_GEMS_MT_GEMS_FILTERED_GEMS_PFF", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "OTHER" + ], + "SeriesNumber": 6, + "AcquisitionTime": "13:32:1.000000", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SpacingBetweenSlices": 5, + "SAR": 2.66979, + "EchoTime": 0.004, + "RepetitionTime": 0.035, + "FlipAngle": 9, + "PercentPhaseFOV": 100, + "AcquisitionMatrixPE": 192, + "ReconMatrixPE": 230, + "PixelBandwidth": 362.348, + "ImageOrientationPatientDICOM": [ + 0.999735, + 0.0227988, + 0.00332293, + -0.0229624, + 0.997768, + 0.0627038 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-perform05/anat/sub-perform05_flip-2_mt-off_space-other_MTS.json b/derivatives/data_preprocessed/sub-perform05/anat/sub-perform05_flip-2_mt-off_space-other_MTS.json index ec7cfcd215..97dcd32273 100644 --- a/derivatives/data_preprocessed/sub-perform05/anat/sub-perform05_flip-2_mt-off_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-perform05/anat/sub-perform05_flip-2_mt-off_space-other_MTS.json @@ -1,42 +1,50 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "GE", - "ManufacturersModelName": "DISCOVERY_MR750", - "InstitutionName": "Concordia_University_Perform_Ctr", - "DeviceSerialNumber": "0000000514848MR1", - "StationName": "GEMR750", - "BodyPartExamined": "NECK", - "PatientPosition": "HFS", - "SoftwareVersions": "27_LX_MR_Software_release:DV25.1_R02_1649.a", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-T1w", - "ProtocolName": "GRE-T1w", - "ScanningSequence": "GR", - "SequenceVariant": "SS_SP", - "ScanOptions": "EDR_GEMS_FILTERED_GEMS_PFF", - "ImageType": ["ORIGINAL", "PRIMARY", "OTHER"], - "SeriesNumber": 9, - "AcquisitionTime": "13:45:30.000000", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SpacingBetweenSlices": 5, - "SAR": 0.0426591, - "EchoTime": 0.004, - "RepetitionTime": 0.015, - "FlipAngle": 15, - "PercentPhaseFOV": 100, - "AcquisitionMatrixPE": 192, - "ReconMatrixPE": 230, - "PixelBandwidth": 362.348, - "ImageOrientationPatientDICOM": [ - 0.999735, - 0.0227988, - 0.00332293, - -0.0229624, - 0.997768, - 0.0627038 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "GE", + "ManufacturersModelName": "DISCOVERY_MR750", + "InstitutionName": "Concordia_University_Perform_Ctr", + "DeviceSerialNumber": "0000000514848MR1", + "StationName": "GEMR750", + "BodyPartExamined": "NECK", + "PatientPosition": "HFS", + "SoftwareVersions": "27_LX_MR_Software_release:DV25.1_R02_1649.a", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-T1w", + "ProtocolName": "GRE-T1w", + "ScanningSequence": "GR", + "SequenceVariant": "SS_SP", + "ScanOptions": "EDR_GEMS_FILTERED_GEMS_PFF", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "OTHER" + ], + "SeriesNumber": 9, + "AcquisitionTime": "13:45:30.000000", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SpacingBetweenSlices": 5, + "SAR": 0.0426591, + "EchoTime": 0.004, + "RepetitionTime": 0.015, + "FlipAngle": 15, + "PercentPhaseFOV": 100, + "AcquisitionMatrixPE": 192, + "ReconMatrixPE": 230, + "PixelBandwidth": 362.348, + "ImageOrientationPatientDICOM": [ + 0.999735, + 0.0227988, + 0.00332293, + -0.0229624, + 0.997768, + 0.0627038 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-perform05/anat/sub-perform05_space-other_T1w.json b/derivatives/data_preprocessed/sub-perform05/anat/sub-perform05_space-other_T1w.json index ee3bc26564..cec0b98e54 100644 --- a/derivatives/data_preprocessed/sub-perform05/anat/sub-perform05_space-other_T1w.json +++ b/derivatives/data_preprocessed/sub-perform05/anat/sub-perform05_space-other_T1w.json @@ -1,43 +1,52 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "GE", - "ManufacturersModelName": "DISCOVERY_MR750", - "InstitutionName": "Concordia_University_Perform_Ctr", - "DeviceSerialNumber": "0000000514848MR1", - "StationName": "GEMR750", - "BodyPartExamined": "CSPINE", - "PatientPosition": "HFS", - "SoftwareVersions": "27_LX_MR_Software_release:DV25.1_R02_1649.a", - "MRAcquisitionType": "3D", - "SeriesDescription": "T1w", - "ProtocolName": "T1w", - "ScanningSequence": "GR", - "SequenceVariant": "SS_SP_SK", - "ScanOptions": "FAST_GEMS_EDR_GEMS_FILTERED_GEMS_ACC_GEMS_PFF", - "ImageType": ["ORIGINAL", "PRIMARY", "OTHER"], - "SeriesNumber": 3, - "AcquisitionTime": "13:16:6.000000", - "AcquisitionNumber": 1, - "SliceThickness": 1, - "SpacingBetweenSlices": 1, - "SAR": 0.642075, - "EchoTime": 0.001188, - "RepetitionTime": 0.003044, - "InversionTime": 1, - "FlipAngle": 9, - "PercentPhaseFOV": 80, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 320, - "PixelBandwidth": 892.875, - "ImageOrientationPatientDICOM": [ - -0, - 1, - 0, - -0, - -0, - -1 ], - "InPlanePhaseEncodingDirectionDICOM": "ROW", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "GE", + "ManufacturersModelName": "DISCOVERY_MR750", + "InstitutionName": "Concordia_University_Perform_Ctr", + "DeviceSerialNumber": "0000000514848MR1", + "StationName": "GEMR750", + "BodyPartExamined": "CSPINE", + "PatientPosition": "HFS", + "SoftwareVersions": "27_LX_MR_Software_release:DV25.1_R02_1649.a", + "MRAcquisitionType": "3D", + "SeriesDescription": "T1w", + "ProtocolName": "T1w", + "ScanningSequence": "GR", + "SequenceVariant": "SS_SP_SK", + "ScanOptions": "FAST_GEMS_EDR_GEMS_FILTERED_GEMS_ACC_GEMS_PFF", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "OTHER" + ], + "SeriesNumber": 3, + "AcquisitionTime": "13:16:6.000000", + "AcquisitionNumber": 1, + "SliceThickness": 1, + "SpacingBetweenSlices": 1, + "SAR": 0.642075, + "EchoTime": 0.001188, + "RepetitionTime": 0.003044, + "InversionTime": 1, + "FlipAngle": 9, + "PercentPhaseFOV": 80, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 320, + "PixelBandwidth": 892.875, + "ImageOrientationPatientDICOM": [ + 0, + 1, + 0, + 0, + 0, + -1 + ], + "InPlanePhaseEncodingDirectionDICOM": "ROW", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-perform05/anat/sub-perform05_space-other_T2star.json b/derivatives/data_preprocessed/sub-perform05/anat/sub-perform05_space-other_T2star.json index 2a57318af6..b8de05c338 100644 --- a/derivatives/data_preprocessed/sub-perform05/anat/sub-perform05_space-other_T2star.json +++ b/derivatives/data_preprocessed/sub-perform05/anat/sub-perform05_space-other_T2star.json @@ -46,5 +46,9 @@ "InPlanePhaseEncodingDirectionDICOM": "ROW", "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0", - "AcquisitionDuration": 288.0 + "AcquisitionDuration": 288.0, + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-perform05/anat/sub-perform05_space-other_T2w.json b/derivatives/data_preprocessed/sub-perform05/anat/sub-perform05_space-other_T2w.json index 7a85e022ab..24b6d28735 100644 --- a/derivatives/data_preprocessed/sub-perform05/anat/sub-perform05_space-other_T2w.json +++ b/derivatives/data_preprocessed/sub-perform05/anat/sub-perform05_space-other_T2w.json @@ -1,43 +1,52 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "GE", - "ManufacturersModelName": "DISCOVERY_MR750", - "InstitutionName": "Concordia_University_Perform_Ctr", - "DeviceSerialNumber": "0000000514848MR1", - "StationName": "GEMR750", - "BodyPartExamined": "CSPINE", - "PatientPosition": "HFS", - "SoftwareVersions": "27_LX_MR_Software_release:DV25.1_R02_1649.a", - "MRAcquisitionType": "3D", - "SeriesDescription": "T2w", - "ProtocolName": "T2w", - "ScanningSequence": "SE", - "SequenceVariant": "SK_OSP", - "ScanOptions": "FC_FREQ_AX_GEMS_FC_NPW_EDR_GEMS_FILTERED_GEMS_ACC_GEMS", - "ImageType": ["ORIGINAL", "PRIMARY", "OTHER"], - "SeriesNumber": 4, - "AcquisitionTime": "13:21:30.000000", - "AcquisitionNumber": 1, - "SliceThickness": 0.8, - "SpacingBetweenSlices": 0.8, - "SAR": 1.44607, - "EchoTime": 0.135159, - "RepetitionTime": 2.5, - "FlipAngle": 90, - "PercentPhaseFOV": 100, - "EchoTrainLength": 78, - "AcquisitionMatrixPE": 320, - "ReconMatrixPE": 320, - "PixelBandwidth": 520.812, - "ImageOrientationPatientDICOM": [ - -0, - 1, - 0, - -0, - -0, - -1 ], - "InPlanePhaseEncodingDirectionDICOM": "ROW", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "GE", + "ManufacturersModelName": "DISCOVERY_MR750", + "InstitutionName": "Concordia_University_Perform_Ctr", + "DeviceSerialNumber": "0000000514848MR1", + "StationName": "GEMR750", + "BodyPartExamined": "CSPINE", + "PatientPosition": "HFS", + "SoftwareVersions": "27_LX_MR_Software_release:DV25.1_R02_1649.a", + "MRAcquisitionType": "3D", + "SeriesDescription": "T2w", + "ProtocolName": "T2w", + "ScanningSequence": "SE", + "SequenceVariant": "SK_OSP", + "ScanOptions": "FC_FREQ_AX_GEMS_FC_NPW_EDR_GEMS_FILTERED_GEMS_ACC_GEMS", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "OTHER" + ], + "SeriesNumber": 4, + "AcquisitionTime": "13:21:30.000000", + "AcquisitionNumber": 1, + "SliceThickness": 0.8, + "SpacingBetweenSlices": 0.8, + "SAR": 1.44607, + "EchoTime": 0.135159, + "RepetitionTime": 2.5, + "FlipAngle": 90, + "PercentPhaseFOV": 100, + "EchoTrainLength": 78, + "AcquisitionMatrixPE": 320, + "ReconMatrixPE": 320, + "PixelBandwidth": 520.812, + "ImageOrientationPatientDICOM": [ + 0, + 1, + 0, + 0, + 0, + -1 + ], + "InPlanePhaseEncodingDirectionDICOM": "ROW", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-perform06/anat/sub-perform06_flip-1_mt-on_space-other_MTS.json b/derivatives/data_preprocessed/sub-perform06/anat/sub-perform06_flip-1_mt-on_space-other_MTS.json index 64f2d6497e..e4e803b068 100644 --- a/derivatives/data_preprocessed/sub-perform06/anat/sub-perform06_flip-1_mt-on_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-perform06/anat/sub-perform06_flip-1_mt-on_space-other_MTS.json @@ -1,42 +1,50 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "GE", - "ManufacturersModelName": "DISCOVERY_MR750", - "InstitutionName": "Concordia_University_Perform_Ctr", - "DeviceSerialNumber": "0000000514848MR1", - "StationName": "GEMR750", - "BodyPartExamined": "NECK", - "PatientPosition": "HFS", - "SoftwareVersions": "27_LX_MR_Software_release:DV25.1_R02_1649.a", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-MT1", - "ProtocolName": "GRE-MT1", - "ScanningSequence": "GR", - "SequenceVariant": "SS_SP", - "ScanOptions": "EDR_GEMS_MT_GEMS_FILTERED_GEMS_PFF", - "ImageType": ["ORIGINAL", "PRIMARY", "OTHER"], - "SeriesNumber": 7, - "AcquisitionTime": "14:11:28.000000", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SpacingBetweenSlices": 5, - "SAR": 2.88486, - "EchoTime": 0.004, - "RepetitionTime": 0.035, - "FlipAngle": 9, - "PercentPhaseFOV": 100, - "AcquisitionMatrixPE": 192, - "ReconMatrixPE": 230, - "PixelBandwidth": 362.348, - "ImageOrientationPatientDICOM": [ - 0.99916, - 0.0226222, - 0.0341837, - -0.0248799, - 0.997434, - 0.0671313 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "GE", + "ManufacturersModelName": "DISCOVERY_MR750", + "InstitutionName": "Concordia_University_Perform_Ctr", + "DeviceSerialNumber": "0000000514848MR1", + "StationName": "GEMR750", + "BodyPartExamined": "NECK", + "PatientPosition": "HFS", + "SoftwareVersions": "27_LX_MR_Software_release:DV25.1_R02_1649.a", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-MT1", + "ProtocolName": "GRE-MT1", + "ScanningSequence": "GR", + "SequenceVariant": "SS_SP", + "ScanOptions": "EDR_GEMS_MT_GEMS_FILTERED_GEMS_PFF", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "OTHER" + ], + "SeriesNumber": 7, + "AcquisitionTime": "14:11:28.000000", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SpacingBetweenSlices": 5, + "SAR": 2.88486, + "EchoTime": 0.004, + "RepetitionTime": 0.035, + "FlipAngle": 9, + "PercentPhaseFOV": 100, + "AcquisitionMatrixPE": 192, + "ReconMatrixPE": 230, + "PixelBandwidth": 362.348, + "ImageOrientationPatientDICOM": [ + 0.99916, + 0.0226222, + 0.0341837, + -0.0248799, + 0.997434, + 0.0671313 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-perform06/anat/sub-perform06_flip-2_mt-off_space-other_MTS.json b/derivatives/data_preprocessed/sub-perform06/anat/sub-perform06_flip-2_mt-off_space-other_MTS.json index 10c42aaec7..0f6fec413d 100644 --- a/derivatives/data_preprocessed/sub-perform06/anat/sub-perform06_flip-2_mt-off_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-perform06/anat/sub-perform06_flip-2_mt-off_space-other_MTS.json @@ -1,42 +1,50 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "GE", - "ManufacturersModelName": "DISCOVERY_MR750", - "InstitutionName": "Concordia_University_Perform_Ctr", - "DeviceSerialNumber": "0000000514848MR1", - "StationName": "GEMR750", - "BodyPartExamined": "NECK", - "PatientPosition": "HFS", - "SoftwareVersions": "27_LX_MR_Software_release:DV25.1_R02_1649.a", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-T1w", - "ProtocolName": "GRE-T1w", - "ScanningSequence": "GR", - "SequenceVariant": "SS_SP", - "ScanOptions": "EDR_GEMS_FILTERED_GEMS_PFF", - "ImageType": ["ORIGINAL", "PRIMARY", "OTHER"], - "SeriesNumber": 9, - "AcquisitionTime": "14:19:8.000000", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SpacingBetweenSlices": 5, - "SAR": 0.0460957, - "EchoTime": 0.004, - "RepetitionTime": 0.015, - "FlipAngle": 15, - "PercentPhaseFOV": 100, - "AcquisitionMatrixPE": 192, - "ReconMatrixPE": 230, - "PixelBandwidth": 362.348, - "ImageOrientationPatientDICOM": [ - 0.99916, - 0.0226222, - 0.0341837, - -0.0248799, - 0.997434, - 0.0671313 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "GE", + "ManufacturersModelName": "DISCOVERY_MR750", + "InstitutionName": "Concordia_University_Perform_Ctr", + "DeviceSerialNumber": "0000000514848MR1", + "StationName": "GEMR750", + "BodyPartExamined": "NECK", + "PatientPosition": "HFS", + "SoftwareVersions": "27_LX_MR_Software_release:DV25.1_R02_1649.a", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-T1w", + "ProtocolName": "GRE-T1w", + "ScanningSequence": "GR", + "SequenceVariant": "SS_SP", + "ScanOptions": "EDR_GEMS_FILTERED_GEMS_PFF", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "OTHER" + ], + "SeriesNumber": 9, + "AcquisitionTime": "14:19:8.000000", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SpacingBetweenSlices": 5, + "SAR": 0.0460957, + "EchoTime": 0.004, + "RepetitionTime": 0.015, + "FlipAngle": 15, + "PercentPhaseFOV": 100, + "AcquisitionMatrixPE": 192, + "ReconMatrixPE": 230, + "PixelBandwidth": 362.348, + "ImageOrientationPatientDICOM": [ + 0.99916, + 0.0226222, + 0.0341837, + -0.0248799, + 0.997434, + 0.0671313 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-perform06/anat/sub-perform06_space-other_T1w.json b/derivatives/data_preprocessed/sub-perform06/anat/sub-perform06_space-other_T1w.json index 57dab4267e..84b0f9a4bc 100644 --- a/derivatives/data_preprocessed/sub-perform06/anat/sub-perform06_space-other_T1w.json +++ b/derivatives/data_preprocessed/sub-perform06/anat/sub-perform06_space-other_T1w.json @@ -1,43 +1,52 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "GE", - "ManufacturersModelName": "DISCOVERY_MR750", - "InstitutionName": "Concordia_University_Perform_Ctr", - "DeviceSerialNumber": "0000000514848MR1", - "StationName": "GEMR750", - "BodyPartExamined": "CSPINE", - "PatientPosition": "HFS", - "SoftwareVersions": "27_LX_MR_Software_release:DV25.1_R02_1649.a", - "MRAcquisitionType": "3D", - "SeriesDescription": "T1w", - "ProtocolName": "T1w", - "ScanningSequence": "GR", - "SequenceVariant": "SS_SP_SK", - "ScanOptions": "FAST_GEMS_EDR_GEMS_FILTERED_GEMS_ACC_GEMS_PFF", - "ImageType": ["ORIGINAL", "PRIMARY", "OTHER"], - "SeriesNumber": 4, - "AcquisitionTime": "13:55:58.000000", - "AcquisitionNumber": 1, - "SliceThickness": 1, - "SpacingBetweenSlices": 1, - "SAR": 0.644293, - "EchoTime": 0.001208, - "RepetitionTime": 0.003092, - "InversionTime": 1, - "FlipAngle": 9, - "PercentPhaseFOV": 80, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 320, - "PixelBandwidth": 892.875, - "ImageOrientationPatientDICOM": [ - -0, - 1, - 0, - -0, - -0, - -1 ], - "InPlanePhaseEncodingDirectionDICOM": "ROW", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "GE", + "ManufacturersModelName": "DISCOVERY_MR750", + "InstitutionName": "Concordia_University_Perform_Ctr", + "DeviceSerialNumber": "0000000514848MR1", + "StationName": "GEMR750", + "BodyPartExamined": "CSPINE", + "PatientPosition": "HFS", + "SoftwareVersions": "27_LX_MR_Software_release:DV25.1_R02_1649.a", + "MRAcquisitionType": "3D", + "SeriesDescription": "T1w", + "ProtocolName": "T1w", + "ScanningSequence": "GR", + "SequenceVariant": "SS_SP_SK", + "ScanOptions": "FAST_GEMS_EDR_GEMS_FILTERED_GEMS_ACC_GEMS_PFF", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "OTHER" + ], + "SeriesNumber": 4, + "AcquisitionTime": "13:55:58.000000", + "AcquisitionNumber": 1, + "SliceThickness": 1, + "SpacingBetweenSlices": 1, + "SAR": 0.644293, + "EchoTime": 0.001208, + "RepetitionTime": 0.003092, + "InversionTime": 1, + "FlipAngle": 9, + "PercentPhaseFOV": 80, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 320, + "PixelBandwidth": 892.875, + "ImageOrientationPatientDICOM": [ + 0, + 1, + 0, + 0, + 0, + -1 + ], + "InPlanePhaseEncodingDirectionDICOM": "ROW", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-perform06/anat/sub-perform06_space-other_T2star.json b/derivatives/data_preprocessed/sub-perform06/anat/sub-perform06_space-other_T2star.json index af233875a8..bf5d8b3595 100644 --- a/derivatives/data_preprocessed/sub-perform06/anat/sub-perform06_space-other_T2star.json +++ b/derivatives/data_preprocessed/sub-perform06/anat/sub-perform06_space-other_T2star.json @@ -46,5 +46,9 @@ "InPlanePhaseEncodingDirectionDICOM": "ROW", "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0", - "AcquisitionDuration": 288.0 + "AcquisitionDuration": 288.0, + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-perform06/anat/sub-perform06_space-other_T2w.json b/derivatives/data_preprocessed/sub-perform06/anat/sub-perform06_space-other_T2w.json index 28da2df986..8172366dc4 100644 --- a/derivatives/data_preprocessed/sub-perform06/anat/sub-perform06_space-other_T2w.json +++ b/derivatives/data_preprocessed/sub-perform06/anat/sub-perform06_space-other_T2w.json @@ -1,43 +1,52 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "GE", - "ManufacturersModelName": "DISCOVERY_MR750", - "InstitutionName": "Concordia_University_Perform_Ctr", - "DeviceSerialNumber": "0000000514848MR1", - "StationName": "GEMR750", - "BodyPartExamined": "CSPINE", - "PatientPosition": "HFS", - "SoftwareVersions": "27_LX_MR_Software_release:DV25.1_R02_1649.a", - "MRAcquisitionType": "3D", - "SeriesDescription": "T2w", - "ProtocolName": "T2w", - "ScanningSequence": "SE", - "SequenceVariant": "SK_OSP", - "ScanOptions": "FC_FREQ_AX_GEMS_FC_NPW_EDR_GEMS_FILTERED_GEMS_ACC_GEMS", - "ImageType": ["ORIGINAL", "PRIMARY", "OTHER"], - "SeriesNumber": 6, - "AcquisitionTime": "14:05:33.000000", - "AcquisitionNumber": 1, - "SliceThickness": 0.8, - "SpacingBetweenSlices": 0.8, - "SAR": 0.966742, - "EchoTime": 0.135896, - "RepetitionTime": 2.5, - "FlipAngle": 90, - "PercentPhaseFOV": 100, - "EchoTrainLength": 78, - "AcquisitionMatrixPE": 320, - "ReconMatrixPE": 320, - "PixelBandwidth": 520.812, - "ImageOrientationPatientDICOM": [ - -0, - 1, - 0, - -0, - -0, - -1 ], - "InPlanePhaseEncodingDirectionDICOM": "ROW", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "GE", + "ManufacturersModelName": "DISCOVERY_MR750", + "InstitutionName": "Concordia_University_Perform_Ctr", + "DeviceSerialNumber": "0000000514848MR1", + "StationName": "GEMR750", + "BodyPartExamined": "CSPINE", + "PatientPosition": "HFS", + "SoftwareVersions": "27_LX_MR_Software_release:DV25.1_R02_1649.a", + "MRAcquisitionType": "3D", + "SeriesDescription": "T2w", + "ProtocolName": "T2w", + "ScanningSequence": "SE", + "SequenceVariant": "SK_OSP", + "ScanOptions": "FC_FREQ_AX_GEMS_FC_NPW_EDR_GEMS_FILTERED_GEMS_ACC_GEMS", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "OTHER" + ], + "SeriesNumber": 6, + "AcquisitionTime": "14:05:33.000000", + "AcquisitionNumber": 1, + "SliceThickness": 0.8, + "SpacingBetweenSlices": 0.8, + "SAR": 0.966742, + "EchoTime": 0.135896, + "RepetitionTime": 2.5, + "FlipAngle": 90, + "PercentPhaseFOV": 100, + "EchoTrainLength": 78, + "AcquisitionMatrixPE": 320, + "ReconMatrixPE": 320, + "PixelBandwidth": 520.812, + "ImageOrientationPatientDICOM": [ + 0, + 1, + 0, + 0, + 0, + -1 + ], + "InPlanePhaseEncodingDirectionDICOM": "ROW", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-queensland01/anat/sub-queensland01_flip-1_mt-on_space-other_MTS.json b/derivatives/data_preprocessed/sub-queensland01/anat/sub-queensland01_flip-1_mt-on_space-other_MTS.json index 99475bb04d..f52e64803b 100644 --- a/derivatives/data_preprocessed/sub-queensland01/anat/sub-queensland01_flip-1_mt-on_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-queensland01/anat/sub-queensland01_flip-1_mt-on_space-other_MTS.json @@ -1,65 +1,75 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma_fit", - "InstitutionName": "St_Lucia_Campus", - "InstitutionalDepartmentName": "Gehrmann_Labs_MRI", - "InstitutionAddress": "Cooper_60_St._Lucia_QLD_AU_4072", - "DeviceSerialNumber": "167001", - "StationName": "mrc_Trio", - "BodyPartExamined": "CSPINE", - "PatientPosition": "HFS", - "ProcedureStepDescription": "Research_14057_DTI_spine", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-MT1", - "ProtocolName": "GRE-MT1", - "ScanningSequence": "GR", - "SequenceVariant": "MTC_SP", - "ScanOptions": "MT", - "SequenceName": "_fl3d1", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "DIS2D"], - "SeriesNumber": 7, - "AcquisitionTime": "14:18:35.002500", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SAR": 0.56312, - "EchoTime": 0.00313, - "RepetitionTime": 0.035, - "FlipAngle": 9, - "PartialFourier": 1, - "BaseResolution": 256, - "ShimSetting": [ - 3043, - -4372, - -1308, - -1122, - -68, - 2198, - -527, - 56 ], - "TxRefAmp": 308.828, - "PhaseResolution": 1, - "ReceiveCoilName": "Spine_32", - "ReceiveCoilActiveElements": "HC7;NC1,2;SP1", - "PulseSequenceDetails": "%SiemensSeq%_gre", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 100, - "PhaseEncodingSteps": 255, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 256, - "ParallelReductionFactorInPlane": 2, - "PixelBandwidth": 260, - "DwellTime": 7.5e-06, - "ImageOrientationPatientDICOM": [ - 0.999132, - -0.00232389, - 0.0415828, - 2.42517e-08, - 0.998442, - 0.0557982 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 GCC4.9.2" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma_fit", + "InstitutionName": "St_Lucia_Campus", + "InstitutionalDepartmentName": "Gehrmann_Labs_MRI", + "InstitutionAddress": "Cooper_60_St._Lucia_QLD_AU_4072", + "DeviceSerialNumber": "167001", + "StationName": "mrc_Trio", + "BodyPartExamined": "CSPINE", + "PatientPosition": "HFS", + "ProcedureStepDescription": "Research_14057_DTI_spine", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-MT1", + "ProtocolName": "GRE-MT1", + "ScanningSequence": "GR", + "SequenceVariant": "MTC_SP", + "ScanOptions": "MT", + "SequenceName": "_fl3d1", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "DIS2D" + ], + "SeriesNumber": 7, + "AcquisitionTime": "14:18:35.002500", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SAR": 0.56312, + "EchoTime": 0.00313, + "RepetitionTime": 0.035, + "FlipAngle": 9, + "PartialFourier": 1, + "BaseResolution": 256, + "ShimSetting": [ + 3043, + -4372, + -1308, + -1122, + -68, + 2198, + -527, + 56 + ], + "TxRefAmp": 308.828, + "PhaseResolution": 1, + "ReceiveCoilName": "Spine_32", + "ReceiveCoilActiveElements": "HC7;NC1,2;SP1", + "PulseSequenceDetails": "%SiemensSeq%_gre", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 255, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "ParallelReductionFactorInPlane": 2, + "PixelBandwidth": 260, + "DwellTime": 7.5e-06, + "ImageOrientationPatientDICOM": [ + 0.999132, + -0.00232389, + 0.0415828, + 2.42517e-08, + 0.998442, + 0.0557982 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 GCC4.9.2", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-queensland01/anat/sub-queensland01_flip-2_mt-off_space-other_MTS.json b/derivatives/data_preprocessed/sub-queensland01/anat/sub-queensland01_flip-2_mt-off_space-other_MTS.json index 84bcca1399..9806d46cc5 100644 --- a/derivatives/data_preprocessed/sub-queensland01/anat/sub-queensland01_flip-2_mt-off_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-queensland01/anat/sub-queensland01_flip-2_mt-off_space-other_MTS.json @@ -1,64 +1,74 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma_fit", - "InstitutionName": "St_Lucia_Campus", - "InstitutionalDepartmentName": "Gehrmann_Labs_MRI", - "InstitutionAddress": "Cooper_60_St._Lucia_QLD_AU_4072", - "DeviceSerialNumber": "167001", - "StationName": "mrc_Trio", - "BodyPartExamined": "CSPINE", - "PatientPosition": "HFS", - "ProcedureStepDescription": "Research_14057_DTI_spine", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-T1w", - "ProtocolName": "GRE-T1w", - "ScanningSequence": "GR", - "SequenceVariant": "SP", - "SequenceName": "_fl3d1", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "DIS2D"], - "SeriesNumber": 9, - "AcquisitionTime": "14:23:1.000000", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SAR": 0.0365109, - "EchoTime": 0.00313, - "RepetitionTime": 0.015, - "FlipAngle": 15, - "PartialFourier": 1, - "BaseResolution": 256, - "ShimSetting": [ - 3043, - -4372, - -1308, - -1122, - -68, - 2198, - -527, - 56 ], - "TxRefAmp": 308.828, - "PhaseResolution": 1, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC7;NC1,2;SP1", - "PulseSequenceDetails": "%SiemensSeq%_gre", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 100, - "PhaseEncodingSteps": 255, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 256, - "ParallelReductionFactorInPlane": 2, - "PixelBandwidth": 260, - "DwellTime": 7.5e-06, - "ImageOrientationPatientDICOM": [ - 0.999132, - -0.00232389, - 0.0415828, - 2.42517e-08, - 0.998442, - 0.0557982 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 GCC4.9.2" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma_fit", + "InstitutionName": "St_Lucia_Campus", + "InstitutionalDepartmentName": "Gehrmann_Labs_MRI", + "InstitutionAddress": "Cooper_60_St._Lucia_QLD_AU_4072", + "DeviceSerialNumber": "167001", + "StationName": "mrc_Trio", + "BodyPartExamined": "CSPINE", + "PatientPosition": "HFS", + "ProcedureStepDescription": "Research_14057_DTI_spine", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-T1w", + "ProtocolName": "GRE-T1w", + "ScanningSequence": "GR", + "SequenceVariant": "SP", + "SequenceName": "_fl3d1", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "DIS2D" + ], + "SeriesNumber": 9, + "AcquisitionTime": "14:23:1.000000", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SAR": 0.0365109, + "EchoTime": 0.00313, + "RepetitionTime": 0.015, + "FlipAngle": 15, + "PartialFourier": 1, + "BaseResolution": 256, + "ShimSetting": [ + 3043, + -4372, + -1308, + -1122, + -68, + 2198, + -527, + 56 + ], + "TxRefAmp": 308.828, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC7;NC1,2;SP1", + "PulseSequenceDetails": "%SiemensSeq%_gre", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 255, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "ParallelReductionFactorInPlane": 2, + "PixelBandwidth": 260, + "DwellTime": 7.5e-06, + "ImageOrientationPatientDICOM": [ + 0.999132, + -0.00232389, + 0.0415828, + 2.42517e-08, + 0.998442, + 0.0557982 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 GCC4.9.2", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-queensland01/anat/sub-queensland01_space-other_T1w.json b/derivatives/data_preprocessed/sub-queensland01/anat/sub-queensland01_space-other_T1w.json index 2f33396a61..fe2094c9cf 100644 --- a/derivatives/data_preprocessed/sub-queensland01/anat/sub-queensland01_space-other_T1w.json +++ b/derivatives/data_preprocessed/sub-queensland01/anat/sub-queensland01_space-other_T1w.json @@ -1,66 +1,79 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma_fit", - "InstitutionName": "St_Lucia_Campus", - "InstitutionalDepartmentName": "Gehrmann_Labs_MRI", - "InstitutionAddress": "Cooper_60_St._Lucia_QLD_AU_4072", - "DeviceSerialNumber": "167001", - "StationName": "mrc_Trio", - "BodyPartExamined": "CSPINE", - "PatientPosition": "HFS", - "ProcedureStepDescription": "Research_14057_DTI_spine", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "T1w", - "ProtocolName": "T1w", - "ScanningSequence": "GR_IR", - "SequenceVariant": "SK_SP_MP", - "ScanOptions": "IR", - "SequenceName": "_tfl3d1_16", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS3D", "DIS2D"], - "SeriesNumber": 2, - "AcquisitionTime": "13:47:27.687500", - "AcquisitionNumber": 1, - "SliceThickness": 1, - "SAR": 0.0735021, - "EchoTime": 0.00372, - "RepetitionTime": 2, - "InversionTime": 1, - "FlipAngle": 9, - "PartialFourier": 1, - "BaseResolution": 320, - "ShimSetting": [ - 3044, - -4172, - -1039, - -11, - -3, - 35, - -21, - -13 ], - "TxRefAmp": 308.825, - "PhaseResolution": 1, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC1-7;NC1,2", - "PulseSequenceDetails": "%SiemensSeq%_tfl", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 81.25, - "PhaseEncodingSteps": 259, - "AcquisitionMatrixPE": 260, - "ReconMatrixPE": 320, - "ParallelReductionFactorInPlane": 2, - "PixelBandwidth": 150, - "DwellTime": 1.04e-05, - "ImageOrientationPatientDICOM": [ - 0, - 1, - 0, - 0.0401318, - 0, - -0.999194 ], - "InPlanePhaseEncodingDirectionDICOM": "ROW", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 GCC4.9.2" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma_fit", + "InstitutionName": "St_Lucia_Campus", + "InstitutionalDepartmentName": "Gehrmann_Labs_MRI", + "InstitutionAddress": "Cooper_60_St._Lucia_QLD_AU_4072", + "DeviceSerialNumber": "167001", + "StationName": "mrc_Trio", + "BodyPartExamined": "CSPINE", + "PatientPosition": "HFS", + "ProcedureStepDescription": "Research_14057_DTI_spine", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "T1w", + "ProtocolName": "T1w", + "ScanningSequence": "GR_IR", + "SequenceVariant": "SK_SP_MP", + "ScanOptions": "IR", + "SequenceName": "_tfl3d1_16", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS3D", + "DIS2D" + ], + "SeriesNumber": 2, + "AcquisitionTime": "13:47:27.687500", + "AcquisitionNumber": 1, + "SliceThickness": 1, + "SAR": 0.0735021, + "EchoTime": 0.00372, + "RepetitionTime": 2, + "InversionTime": 1, + "FlipAngle": 9, + "PartialFourier": 1, + "BaseResolution": 320, + "ShimSetting": [ + 3044, + -4172, + -1039, + -11, + -3, + 35, + -21, + -13 + ], + "TxRefAmp": 308.825, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC1-7;NC1,2", + "PulseSequenceDetails": "%SiemensSeq%_tfl", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 81.25, + "PhaseEncodingSteps": 259, + "AcquisitionMatrixPE": 260, + "ReconMatrixPE": 320, + "ParallelReductionFactorInPlane": 2, + "PixelBandwidth": 150, + "DwellTime": 1.04e-05, + "ImageOrientationPatientDICOM": [ + 0, + 1, + 0, + 0.0401318, + 0, + -0.999194 + ], + "InPlanePhaseEncodingDirectionDICOM": "ROW", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 GCC4.9.2", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-queensland01/anat/sub-queensland01_space-other_T2star.json b/derivatives/data_preprocessed/sub-queensland01/anat/sub-queensland01_space-other_T2star.json index 2af0fe6a2b..ded03da23d 100644 --- a/derivatives/data_preprocessed/sub-queensland01/anat/sub-queensland01_space-other_T2star.json +++ b/derivatives/data_preprocessed/sub-queensland01/anat/sub-queensland01_space-other_T2star.json @@ -73,5 +73,9 @@ "InPlanePhaseEncodingDirectionDICOM": "COL", "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20180622 GCC4.9.2", - "AcquisitionDuration": 285.0 + "AcquisitionDuration": 285.0, + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-queensland01/anat/sub-queensland01_space-other_T2w.json b/derivatives/data_preprocessed/sub-queensland01/anat/sub-queensland01_space-other_T2w.json index 7f1992a53a..5319c0ee16 100644 --- a/derivatives/data_preprocessed/sub-queensland01/anat/sub-queensland01_space-other_T2w.json +++ b/derivatives/data_preprocessed/sub-queensland01/anat/sub-queensland01_space-other_T2w.json @@ -1,67 +1,80 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma_fit", - "InstitutionName": "St_Lucia_Campus", - "InstitutionalDepartmentName": "Gehrmann_Labs_MRI", - "InstitutionAddress": "Cooper_60_St._Lucia_QLD_AU_4072", - "DeviceSerialNumber": "167001", - "StationName": "mrc_Trio", - "BodyPartExamined": "CSPINE", - "PatientPosition": "HFS", - "ProcedureStepDescription": "Research_14057_DTI_spine", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "T2w", - "ProtocolName": "T2w", - "ScanningSequence": "SE", - "SequenceVariant": "SK_SP_OSP", - "ScanOptions": "PFP", - "SequenceName": "_spcR_100", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS3D", "DIS2D"], - "SeriesNumber": 3, - "AcquisitionTime": "13:52:40.992500", - "AcquisitionNumber": 1, - "SliceThickness": 0.8, - "SAR": 0.56935, - "EchoTime": 0.12, - "RepetitionTime": 1.5, - "FlipAngle": 120, - "PartialFourier": 1, - "BaseResolution": 320, - "ShimSetting": [ - 3044, - -4172, - -1039, - -11, - -3, - 35, - -21, - -13 ], - "TxRefAmp": 308.828, - "PhaseResolution": 1, - "PhaseOversampling": 0.8, - "ReceiveCoilName": "Spine_32", - "ReceiveCoilActiveElements": "HC5-7;NC1,2;SP1", - "PulseSequenceDetails": "%SiemensSeq%_tse_vfl", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 100, - "EchoTrainLength": 76, - "PhaseEncodingSteps": 422, - "AcquisitionMatrixPE": 320, - "ReconMatrixPE": 320, - "ParallelReductionFactorInPlane": 3, - "PixelBandwidth": 625, - "DwellTime": 2.5e-06, - "ImageOrientationPatientDICOM": [ - -2.14e-13, - 1, - 4.892e-12, - 0.0436194, - 4.897e-12, - -0.999048 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 GCC4.9.2" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma_fit", + "InstitutionName": "St_Lucia_Campus", + "InstitutionalDepartmentName": "Gehrmann_Labs_MRI", + "InstitutionAddress": "Cooper_60_St._Lucia_QLD_AU_4072", + "DeviceSerialNumber": "167001", + "StationName": "mrc_Trio", + "BodyPartExamined": "CSPINE", + "PatientPosition": "HFS", + "ProcedureStepDescription": "Research_14057_DTI_spine", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "T2w", + "ProtocolName": "T2w", + "ScanningSequence": "SE", + "SequenceVariant": "SK_SP_OSP", + "ScanOptions": "PFP", + "SequenceName": "_spcR_100", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS3D", + "DIS2D" + ], + "SeriesNumber": 3, + "AcquisitionTime": "13:52:40.992500", + "AcquisitionNumber": 1, + "SliceThickness": 0.8, + "SAR": 0.56935, + "EchoTime": 0.12, + "RepetitionTime": 1.5, + "FlipAngle": 120, + "PartialFourier": 1, + "BaseResolution": 320, + "ShimSetting": [ + 3044, + -4172, + -1039, + -11, + -3, + 35, + -21, + -13 + ], + "TxRefAmp": 308.828, + "PhaseResolution": 1, + "PhaseOversampling": 0.8, + "ReceiveCoilName": "Spine_32", + "ReceiveCoilActiveElements": "HC5-7;NC1,2;SP1", + "PulseSequenceDetails": "%SiemensSeq%_tse_vfl", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "EchoTrainLength": 76, + "PhaseEncodingSteps": 422, + "AcquisitionMatrixPE": 320, + "ReconMatrixPE": 320, + "ParallelReductionFactorInPlane": 3, + "PixelBandwidth": 625, + "DwellTime": 2.5e-06, + "ImageOrientationPatientDICOM": [ + -2.14e-13, + 1, + 4.892e-12, + 0.0436194, + 4.897e-12, + -0.999048 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 GCC4.9.2", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-queensland02/anat/sub-queensland02_flip-1_mt-on_space-other_MTS.json b/derivatives/data_preprocessed/sub-queensland02/anat/sub-queensland02_flip-1_mt-on_space-other_MTS.json index f4b4ca1610..fcffc5deb4 100644 --- a/derivatives/data_preprocessed/sub-queensland02/anat/sub-queensland02_flip-1_mt-on_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-queensland02/anat/sub-queensland02_flip-1_mt-on_space-other_MTS.json @@ -1,65 +1,75 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma_fit", - "InstitutionName": "St_Lucia_Campus", - "InstitutionalDepartmentName": "Gehrmann_Labs_MRI", - "InstitutionAddress": "Cooper_60_St._Lucia_QLD_AU_4072", - "DeviceSerialNumber": "167001", - "StationName": "mrc_Trio", - "BodyPartExamined": "CSPINE", - "PatientPosition": "HFS", - "ProcedureStepDescription": "Research_14057_DTI_spine", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-MT1", - "ProtocolName": "GRE-MT1", - "ScanningSequence": "GR", - "SequenceVariant": "MTC_SP", - "ScanOptions": "MT", - "SequenceName": "_fl3d1", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "DIS2D"], - "SeriesNumber": 9, - "AcquisitionTime": "09:37:16.062500", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SAR": 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"Prisma_fit", + "InstitutionName": "St_Lucia_Campus", + "InstitutionalDepartmentName": "Gehrmann_Labs_MRI", + "InstitutionAddress": "Cooper_60_St._Lucia_QLD_AU_4072", + "DeviceSerialNumber": "167001", + "StationName": "mrc_Trio", + "BodyPartExamined": "CSPINE", + "PatientPosition": "HFS", + "ProcedureStepDescription": "Research_14057_DTI_spine", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-MT1", + "ProtocolName": "GRE-MT1", + "ScanningSequence": "GR", + "SequenceVariant": "MTC_SP", + "ScanOptions": "MT", + "SequenceName": "_fl3d1", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "DIS2D" + ], + "SeriesNumber": 9, + "AcquisitionTime": "09:37:16.062500", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SAR": 0.610905, + "EchoTime": 0.00313, + "RepetitionTime": 0.035, + "FlipAngle": 9, + "PartialFourier": 1, + "BaseResolution": 256, + "ShimSetting": [ + 3030, + -4349, + -987, + -966, + 160, + 2057, + -196, + -251 + ], + "TxRefAmp": 286.279, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC5,7;NC1,2", + "PulseSequenceDetails": "%SiemensSeq%_gre", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 255, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "ParallelReductionFactorInPlane": 2, + "PixelBandwidth": 260, + "DwellTime": 7.5e-06, + "ImageOrientationPatientDICOM": [ + 1, + 8.67973e-05, + -0.000455298, + 2.42123e-08, + 0.9823, + 0.187317 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 GCC4.9.2", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-queensland02/anat/sub-queensland02_flip-2_mt-off_space-other_MTS.json b/derivatives/data_preprocessed/sub-queensland02/anat/sub-queensland02_flip-2_mt-off_space-other_MTS.json index 92b078df67..43857508f6 100644 --- a/derivatives/data_preprocessed/sub-queensland02/anat/sub-queensland02_flip-2_mt-off_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-queensland02/anat/sub-queensland02_flip-2_mt-off_space-other_MTS.json @@ -1,64 +1,74 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma_fit", - "InstitutionName": "St_Lucia_Campus", - "InstitutionalDepartmentName": "Gehrmann_Labs_MRI", - "InstitutionAddress": "Cooper_60_St._Lucia_QLD_AU_4072", - "DeviceSerialNumber": "167001", - "StationName": "mrc_Trio", - "BodyPartExamined": "CSPINE", - "PatientPosition": "HFS", - "ProcedureStepDescription": "Research_14057_DTI_spine", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-T1w", - "ProtocolName": "GRE-T1w", - "ScanningSequence": "GR", - "SequenceVariant": "SP", - "SequenceName": "_fl3d1", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "DIS2D"], - "SeriesNumber": 11, - 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"MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma_fit", + "InstitutionName": "St_Lucia_Campus", + "InstitutionalDepartmentName": "Gehrmann_Labs_MRI", + "InstitutionAddress": "Cooper_60_St._Lucia_QLD_AU_4072", + "DeviceSerialNumber": "167001", + "StationName": "mrc_Trio", + "BodyPartExamined": "CSPINE", + "PatientPosition": "HFS", + "ProcedureStepDescription": "Research_14057_DTI_spine", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-T1w", + "ProtocolName": "GRE-T1w", + "ScanningSequence": "GR", + "SequenceVariant": "SP", + "SequenceName": "_fl3d1", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "DIS2D" + ], + "SeriesNumber": 11, + "AcquisitionTime": "09:41:42.005000", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SAR": 0.0396092, + "EchoTime": 0.00313, + "RepetitionTime": 0.015, + "FlipAngle": 15, + "PartialFourier": 1, + "BaseResolution": 256, + "ShimSetting": [ + 3030, + -4349, + -987, + -966, + 160, + 2057, + -196, + -251 + ], + "TxRefAmp": 286.279, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC5,7;NC1,2", + "PulseSequenceDetails": "%SiemensSeq%_gre", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 255, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "ParallelReductionFactorInPlane": 2, + "PixelBandwidth": 260, + "DwellTime": 7.5e-06, + "ImageOrientationPatientDICOM": [ + 1, + 8.67973e-05, + -0.000455298, + 2.42123e-08, + 0.9823, + 0.187317 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 GCC4.9.2", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-queensland02/anat/sub-queensland02_space-other_T1w.json b/derivatives/data_preprocessed/sub-queensland02/anat/sub-queensland02_space-other_T1w.json index 5ef8922053..13218b27ac 100644 --- a/derivatives/data_preprocessed/sub-queensland02/anat/sub-queensland02_space-other_T1w.json +++ b/derivatives/data_preprocessed/sub-queensland02/anat/sub-queensland02_space-other_T1w.json @@ -1,66 +1,79 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma_fit", - "InstitutionName": "St_Lucia_Campus", - "InstitutionalDepartmentName": "Gehrmann_Labs_MRI", - "InstitutionAddress": "Cooper_60_St._Lucia_QLD_AU_4072", - "DeviceSerialNumber": "167001", - "StationName": "mrc_Trio", - "BodyPartExamined": "CSPINE", - "PatientPosition": "HFS", - "ProcedureStepDescription": "Research_14057_DTI_spine", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "T1w", - "ProtocolName": "T1w", - "ScanningSequence": "GR_IR", - "SequenceVariant": "SK_SP_MP", - "ScanOptions": 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"ROW", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 GCC4.9.2" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma_fit", + "InstitutionName": "St_Lucia_Campus", + "InstitutionalDepartmentName": "Gehrmann_Labs_MRI", + "InstitutionAddress": "Cooper_60_St._Lucia_QLD_AU_4072", + "DeviceSerialNumber": "167001", + "StationName": "mrc_Trio", + "BodyPartExamined": "CSPINE", + "PatientPosition": "HFS", + "ProcedureStepDescription": "Research_14057_DTI_spine", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "T1w", + "ProtocolName": "T1w", + "ScanningSequence": "GR_IR", + "SequenceVariant": "SK_SP_MP", + "ScanOptions": "IR", + "SequenceName": "_tfl3d1_16", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS3D", + "DIS2D" + ], + "SeriesNumber": 3, + "AcquisitionTime": "09:18:56.712500", + "AcquisitionNumber": 1, + "SliceThickness": 1, + 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diff --git a/derivatives/data_preprocessed/sub-queensland02/anat/sub-queensland02_space-other_T2star.json b/derivatives/data_preprocessed/sub-queensland02/anat/sub-queensland02_space-other_T2star.json index 45fb57ee4b..8c8c2ef4c4 100644 --- a/derivatives/data_preprocessed/sub-queensland02/anat/sub-queensland02_space-other_T2star.json +++ b/derivatives/data_preprocessed/sub-queensland02/anat/sub-queensland02_space-other_T2star.json @@ -73,5 +73,9 @@ "InPlanePhaseEncodingDirectionDICOM": "COL", "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20180622 GCC4.9.2", - "AcquisitionDuration": 285.0 + "AcquisitionDuration": 285.0, + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-queensland02/anat/sub-queensland02_space-other_T2w.json b/derivatives/data_preprocessed/sub-queensland02/anat/sub-queensland02_space-other_T2w.json index adf6a0bfe1..32ef56c699 100644 --- a/derivatives/data_preprocessed/sub-queensland02/anat/sub-queensland02_space-other_T2w.json +++ b/derivatives/data_preprocessed/sub-queensland02/anat/sub-queensland02_space-other_T2w.json @@ -1,67 +1,80 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma_fit", - "InstitutionName": "St_Lucia_Campus", - "InstitutionalDepartmentName": "Gehrmann_Labs_MRI", - "InstitutionAddress": "Cooper_60_St._Lucia_QLD_AU_4072", - "DeviceSerialNumber": "167001", - "StationName": "mrc_Trio", - "BodyPartExamined": "CSPINE", - "PatientPosition": "HFS", - "ProcedureStepDescription": "Research_14057_DTI_spine", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "T2w", - "ProtocolName": "T2w", - "ScanningSequence": "SE", - "SequenceVariant": "SK_SP_OSP", - "ScanOptions": "PFP", - "SequenceName": "_spcR_100", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS3D", 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"dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 GCC4.9.2" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma_fit", + "InstitutionName": "St_Lucia_Campus", + "InstitutionalDepartmentName": "Gehrmann_Labs_MRI", + "InstitutionAddress": "Cooper_60_St._Lucia_QLD_AU_4072", + "DeviceSerialNumber": "167001", + "StationName": "mrc_Trio", + "BodyPartExamined": "CSPINE", + "PatientPosition": "HFS", + "ProcedureStepDescription": "Research_14057_DTI_spine", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "T2w", + "ProtocolName": "T2w", + "ScanningSequence": "SE", + "SequenceVariant": "SK_SP_OSP", + "ScanOptions": "PFP", + "SequenceName": "_spcR_100", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS3D", + "DIS2D" + ], + "SeriesNumber": 4, + "AcquisitionTime": "09:25:35.895000", + "AcquisitionNumber": 1, + "SliceThickness": 0.8, + "SAR": 0.560053, + "EchoTime": 0.12, + "RepetitionTime": 1.5, + "FlipAngle": 120, + "PartialFourier": 1, + "BaseResolution": 320, + "ShimSetting": [ + 3044, + -4172, + -1039, + -11, + -3, + 35, + -21, + -13 + ], + "TxRefAmp": 271.828, + "PhaseResolution": 1, + "PhaseOversampling": 0.8, + "ReceiveCoilName": "Spine_32", + "ReceiveCoilActiveElements": "HC5-7;NC1,2;SP1", + "PulseSequenceDetails": "%SiemensSeq%_tse_vfl", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "EchoTrainLength": 76, + "PhaseEncodingSteps": 422, + "AcquisitionMatrixPE": 320, + "ReconMatrixPE": 320, + "ParallelReductionFactorInPlane": 3, + "PixelBandwidth": 625, + "DwellTime": 2.5e-06, + "ImageOrientationPatientDICOM": [ + -9.4e-14, + 1, + 4.896e-12, + 0.0191974, + 4.897e-12, + -0.999816 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 GCC4.9.2", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-queensland03/anat/sub-queensland03_flip-1_mt-on_space-other_MTS.json b/derivatives/data_preprocessed/sub-queensland03/anat/sub-queensland03_flip-1_mt-on_space-other_MTS.json index 9d43a5332f..3b78891599 100644 --- a/derivatives/data_preprocessed/sub-queensland03/anat/sub-queensland03_flip-1_mt-on_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-queensland03/anat/sub-queensland03_flip-1_mt-on_space-other_MTS.json @@ -1,65 +1,75 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma_fit", - "InstitutionName": "St_Lucia_Campus", - "InstitutionalDepartmentName": "Gehrmann_Labs_MRI", - "InstitutionAddress": "Cooper_60_St._Lucia_QLD_AU_4072", - "DeviceSerialNumber": "167001", - "StationName": "mrc_Trio", - "BodyPartExamined": "CSPINE", - "PatientPosition": "HFS", - "ProcedureStepDescription": "Research_14057_DTI_spine", - "SoftwareVersions": 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260, - "DwellTime": 7.5e-06, - "ImageOrientationPatientDICOM": [ - 0.998346, - -0.00401545, - 0.0573471, - 5.92905e-08, - 0.997558, - 0.0698481 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 GCC4.9.2" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma_fit", + "InstitutionName": "St_Lucia_Campus", + "InstitutionalDepartmentName": "Gehrmann_Labs_MRI", + "InstitutionAddress": "Cooper_60_St._Lucia_QLD_AU_4072", + "DeviceSerialNumber": "167001", + "StationName": "mrc_Trio", + "BodyPartExamined": "CSPINE", + "PatientPosition": "HFS", + "ProcedureStepDescription": "Research_14057_DTI_spine", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-MT1", + "ProtocolName": "GRE-MT1", + "ScanningSequence": "GR", + "SequenceVariant": "MTC_SP", + "ScanOptions": "MT", + "SequenceName": "_fl3d1", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "DIS2D" + ], + "SeriesNumber": 8, + "AcquisitionTime": "14:26:2.030000", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SAR": 0.613885, + "EchoTime": 0.00313, + "RepetitionTime": 0.035, + "FlipAngle": 9, + "PartialFourier": 1, + "BaseResolution": 256, + "ShimSetting": [ + 3049, + -4332, + -1008, + -1599, + -299, + 1845, + -277, + 253 + ], + "TxRefAmp": 286.133, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC7;NC1,2;SP1", + "PulseSequenceDetails": "%SiemensSeq%_gre", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 255, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "ParallelReductionFactorInPlane": 2, + "PixelBandwidth": 260, + "DwellTime": 7.5e-06, + "ImageOrientationPatientDICOM": [ + 0.998346, + -0.00401545, + 0.0573471, + 5.92905e-08, + 0.997558, + 0.0698481 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 GCC4.9.2", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-queensland03/anat/sub-queensland03_flip-2_mt-off_space-other_MTS.json b/derivatives/data_preprocessed/sub-queensland03/anat/sub-queensland03_flip-2_mt-off_space-other_MTS.json index 5c66ee2de4..747a5c229a 100644 --- a/derivatives/data_preprocessed/sub-queensland03/anat/sub-queensland03_flip-2_mt-off_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-queensland03/anat/sub-queensland03_flip-2_mt-off_space-other_MTS.json @@ -1,64 +1,74 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma_fit", - "InstitutionName": "St_Lucia_Campus", - "InstitutionalDepartmentName": "Gehrmann_Labs_MRI", - "InstitutionAddress": "Cooper_60_St._Lucia_QLD_AU_4072", - "DeviceSerialNumber": "167001", - "StationName": "mrc_Trio", - "BodyPartExamined": "CSPINE", - "PatientPosition": "HFS", - "ProcedureStepDescription": "Research_14057_DTI_spine", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-T1w", - "ProtocolName": "GRE-T1w", - "ScanningSequence": "GR", - "SequenceVariant": "SP", - "SequenceName": "_fl3d1", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "DIS2D"], - "SeriesNumber": 10, - "AcquisitionTime": "14:30:28.062500", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SAR": 0.0398024, - "EchoTime": 0.00313, - "RepetitionTime": 0.015, - "FlipAngle": 15, - "PartialFourier": 1, - "BaseResolution": 256, - "ShimSetting": [ - 3049, - -4332, - -1008, - -1599, - -299, - 1845, - -277, - 253 ], - "TxRefAmp": 286.133, - "PhaseResolution": 1, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC7;NC1,2;SP1", - "PulseSequenceDetails": "%SiemensSeq%_gre", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 100, - "PhaseEncodingSteps": 255, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 256, - "ParallelReductionFactorInPlane": 2, - "PixelBandwidth": 260, - "DwellTime": 7.5e-06, - "ImageOrientationPatientDICOM": [ - 0.998346, - -0.00401545, - 0.0573471, - 5.92905e-08, - 0.997558, - 0.0698481 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 GCC4.9.2" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma_fit", + "InstitutionName": "St_Lucia_Campus", + "InstitutionalDepartmentName": "Gehrmann_Labs_MRI", + "InstitutionAddress": "Cooper_60_St._Lucia_QLD_AU_4072", + "DeviceSerialNumber": "167001", + "StationName": "mrc_Trio", + "BodyPartExamined": "CSPINE", + "PatientPosition": "HFS", + "ProcedureStepDescription": "Research_14057_DTI_spine", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-T1w", + "ProtocolName": "GRE-T1w", + "ScanningSequence": "GR", + "SequenceVariant": "SP", + "SequenceName": "_fl3d1", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "DIS2D" + ], + "SeriesNumber": 10, + "AcquisitionTime": "14:30:28.062500", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SAR": 0.0398024, + "EchoTime": 0.00313, + "RepetitionTime": 0.015, + "FlipAngle": 15, + "PartialFourier": 1, + "BaseResolution": 256, + "ShimSetting": [ + 3049, + -4332, + -1008, + -1599, + -299, + 1845, + -277, + 253 + ], + "TxRefAmp": 286.133, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC7;NC1,2;SP1", + "PulseSequenceDetails": "%SiemensSeq%_gre", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 255, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "ParallelReductionFactorInPlane": 2, + "PixelBandwidth": 260, + "DwellTime": 7.5e-06, + "ImageOrientationPatientDICOM": [ + 0.998346, + -0.00401545, + 0.0573471, + 5.92905e-08, + 0.997558, + 0.0698481 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 GCC4.9.2", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-queensland03/anat/sub-queensland03_space-other_T1w.json b/derivatives/data_preprocessed/sub-queensland03/anat/sub-queensland03_space-other_T1w.json index eea501995b..0a7f1f4e08 100644 --- a/derivatives/data_preprocessed/sub-queensland03/anat/sub-queensland03_space-other_T1w.json +++ b/derivatives/data_preprocessed/sub-queensland03/anat/sub-queensland03_space-other_T1w.json @@ -1,66 +1,79 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma_fit", - "InstitutionName": "St_Lucia_Campus", - "InstitutionalDepartmentName": "Gehrmann_Labs_MRI", - "InstitutionAddress": "Cooper_60_St._Lucia_QLD_AU_4072", - "DeviceSerialNumber": 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"ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 81.25, - "PhaseEncodingSteps": 259, - "AcquisitionMatrixPE": 260, - "ReconMatrixPE": 320, - "ParallelReductionFactorInPlane": 2, - "PixelBandwidth": 150, - "DwellTime": 1.04e-05, - "ImageOrientationPatientDICOM": [ - 0, - 1, - 0, - 0.045363, - 0, - -0.998971 ], - "InPlanePhaseEncodingDirectionDICOM": "ROW", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 GCC4.9.2" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma_fit", + "InstitutionName": "St_Lucia_Campus", + "InstitutionalDepartmentName": "Gehrmann_Labs_MRI", + "InstitutionAddress": "Cooper_60_St._Lucia_QLD_AU_4072", + "DeviceSerialNumber": "167001", + "StationName": "mrc_Trio", + "BodyPartExamined": "CSPINE", + "PatientPosition": "HFS", + "ProcedureStepDescription": "Research_14057_DTI_spine", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "T1w", + "ProtocolName": "T1w", + "ScanningSequence": "GR_IR", + "SequenceVariant": "SK_SP_MP", + "ScanOptions": "IR", + "SequenceName": "_tfl3d1_16", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS3D", + "DIS2D" + ], + "SeriesNumber": 2, + "AcquisitionTime": "14:12:44.692500", + "AcquisitionNumber": 1, + "SliceThickness": 1, + "SAR": 0.0615976, + "EchoTime": 0.00372, + "RepetitionTime": 2, + "InversionTime": 1, + "FlipAngle": 9, + "PartialFourier": 1, + "BaseResolution": 320, + "ShimSetting": [ + 3044, + -4172, + -1039, + -11, + -3, + 35, + -21, + -13 + ], + "TxRefAmp": 255.226, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC1-7;NC1,2", + "PulseSequenceDetails": "%SiemensSeq%_tfl", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 81.25, + "PhaseEncodingSteps": 259, + "AcquisitionMatrixPE": 260, + "ReconMatrixPE": 320, + "ParallelReductionFactorInPlane": 2, + "PixelBandwidth": 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"AcquisitionDuration": 285.0, + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-queensland03/anat/sub-queensland03_space-other_T2w.json b/derivatives/data_preprocessed/sub-queensland03/anat/sub-queensland03_space-other_T2w.json index bd545abbf0..44f86e2859 100644 --- a/derivatives/data_preprocessed/sub-queensland03/anat/sub-queensland03_space-other_T2w.json +++ b/derivatives/data_preprocessed/sub-queensland03/anat/sub-queensland03_space-other_T2w.json @@ -1,67 +1,80 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma_fit", - "InstitutionName": "St_Lucia_Campus", - "InstitutionalDepartmentName": "Gehrmann_Labs_MRI", - "InstitutionAddress": "Cooper_60_St._Lucia_QLD_AU_4072", - "DeviceSerialNumber": "167001", - "StationName": "mrc_Trio", - "BodyPartExamined": "CSPINE", - 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"ProtocolName": "T2w", + "ScanningSequence": "SE", + "SequenceVariant": "SK_SP_OSP", + "ScanOptions": "PFP", + "SequenceName": "_spcR_100", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS3D", + "DIS2D" + ], + "SeriesNumber": 3, + "AcquisitionTime": "14:17:56.727500", + "AcquisitionNumber": 1, + "SliceThickness": 0.8, + "SAR": 0.620676, + "EchoTime": 0.12, + "RepetitionTime": 1.5, + "FlipAngle": 120, + "PartialFourier": 1, + "BaseResolution": 320, + "ShimSetting": [ + 3044, + -4172, + -1039, + -11, + -3, + 35, + -21, + -13 + ], + "TxRefAmp": 286.133, + "PhaseResolution": 1, + "PhaseOversampling": 0.8, + "ReceiveCoilName": "Spine_32", + "ReceiveCoilActiveElements": "HC5-7;NC1,2;SP1", + "PulseSequenceDetails": "%SiemensSeq%_tse_vfl", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "EchoTrainLength": 76, + "PhaseEncodingSteps": 422, + "AcquisitionMatrixPE": 320, + "ReconMatrixPE": 320, + "ParallelReductionFactorInPlane": 3, + 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"StationName": "mrc_Trio", + "BodyPartExamined": "CSPINE", + "PatientPosition": "HFS", + "ProcedureStepDescription": "Research_14057_DTI_spine", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-MT1", + "ProtocolName": "GRE-MT1", + "ScanningSequence": "GR", + "SequenceVariant": "MTC_SP", + "ScanOptions": "MT", + "SequenceName": "_fl3d1", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "DIS2D" + ], + "SeriesNumber": 6, + "AcquisitionTime": "15:14:40.972500", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SAR": 0.476336, + "EchoTime": 0.00313, + "RepetitionTime": 0.035, + "FlipAngle": 9, + "PartialFourier": 1, + "BaseResolution": 256, + "ShimSetting": [ + 3039, + -4141, + -1035, + -856, + 83, + 2200, + -963, + -169 + ], + "TxRefAmp": 281.482, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC5-7;NC1,2", + "PulseSequenceDetails": "%SiemensSeq%_gre", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 255, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "ParallelReductionFactorInPlane": 2, + "PixelBandwidth": 260, + "DwellTime": 7.5e-06, + "ImageOrientationPatientDICOM": [ + 0.99945, + 0.00358076, + -0.0329612, + -2.49013e-08, + 0.994151, + 0.107999 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 GCC4.9.2", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-queensland04/anat/sub-queensland04_flip-2_mt-off_space-other_MTS.json b/derivatives/data_preprocessed/sub-queensland04/anat/sub-queensland04_flip-2_mt-off_space-other_MTS.json index c828727e86..b1602bfa04 100644 --- a/derivatives/data_preprocessed/sub-queensland04/anat/sub-queensland04_flip-2_mt-off_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-queensland04/anat/sub-queensland04_flip-2_mt-off_space-other_MTS.json @@ -1,64 +1,74 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma_fit", - "InstitutionName": "St_Lucia_Campus", - "InstitutionalDepartmentName": "Gehrmann_Labs_MRI", - "InstitutionAddress": "Cooper_60_St._Lucia_QLD_AU_4072", - "DeviceSerialNumber": "167001", - "StationName": "mrc_Trio", - "BodyPartExamined": "CSPINE", - "PatientPosition": "HFS", - "ProcedureStepDescription": "Research_14057_DTI_spine", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-T1w", - "ProtocolName": "GRE-T1w", - "ScanningSequence": "GR", - "SequenceVariant": "SP", - "SequenceName": "_fl3d1", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "DIS2D"], - "SeriesNumber": 8, - "AcquisitionTime": "15:19:29.007500", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SAR": 0.0308841, - "EchoTime": 0.00313, - "RepetitionTime": 0.015, - "FlipAngle": 15, - "PartialFourier": 1, - "BaseResolution": 256, - "ShimSetting": [ - 3039, - -4141, - -1035, - -856, - 83, - 2200, - -963, - -169 ], - "TxRefAmp": 281.482, - "PhaseResolution": 1, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC5-7;NC1,2", - "PulseSequenceDetails": "%SiemensSeq%_gre", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 100, - "PhaseEncodingSteps": 255, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 256, - "ParallelReductionFactorInPlane": 2, - "PixelBandwidth": 260, - "DwellTime": 7.5e-06, - "ImageOrientationPatientDICOM": [ - 0.99945, - 0.00358076, - -0.0329612, - -2.49013e-08, - 0.994151, - 0.107999 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 GCC4.9.2" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma_fit", + "InstitutionName": "St_Lucia_Campus", + "InstitutionalDepartmentName": "Gehrmann_Labs_MRI", + "InstitutionAddress": "Cooper_60_St._Lucia_QLD_AU_4072", + "DeviceSerialNumber": "167001", + "StationName": "mrc_Trio", + "BodyPartExamined": "CSPINE", + "PatientPosition": "HFS", + "ProcedureStepDescription": "Research_14057_DTI_spine", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-T1w", + "ProtocolName": "GRE-T1w", + "ScanningSequence": "GR", + "SequenceVariant": "SP", + "SequenceName": "_fl3d1", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "DIS2D" + ], + "SeriesNumber": 8, + "AcquisitionTime": "15:19:29.007500", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SAR": 0.0308841, + "EchoTime": 0.00313, + "RepetitionTime": 0.015, + "FlipAngle": 15, + "PartialFourier": 1, + "BaseResolution": 256, + "ShimSetting": [ + 3039, + -4141, + -1035, + -856, + 83, + 2200, + -963, + -169 + ], + "TxRefAmp": 281.482, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC5-7;NC1,2", + "PulseSequenceDetails": "%SiemensSeq%_gre", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 255, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "ParallelReductionFactorInPlane": 2, + "PixelBandwidth": 260, + "DwellTime": 7.5e-06, + "ImageOrientationPatientDICOM": [ + 0.99945, + 0.00358076, + -0.0329612, + -2.49013e-08, + 0.994151, + 0.107999 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 GCC4.9.2", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-queensland04/anat/sub-queensland04_space-other_T1w.json b/derivatives/data_preprocessed/sub-queensland04/anat/sub-queensland04_space-other_T1w.json index 0a9b265bc2..ad41c72b13 100644 --- a/derivatives/data_preprocessed/sub-queensland04/anat/sub-queensland04_space-other_T1w.json +++ b/derivatives/data_preprocessed/sub-queensland04/anat/sub-queensland04_space-other_T1w.json @@ -1,66 +1,79 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma_fit", - "InstitutionName": "St_Lucia_Campus", - "InstitutionalDepartmentName": "Gehrmann_Labs_MRI", - "InstitutionAddress": "Cooper_60_St._Lucia_QLD_AU_4072", - "DeviceSerialNumber": "167001", - "StationName": "mrc_Trio", - "BodyPartExamined": "CSPINE", - "PatientPosition": "HFS", - "ProcedureStepDescription": "Research_14057_DTI_spine", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "T1w", - "ProtocolName": "T1w", - "ScanningSequence": "GR_IR", - "SequenceVariant": "SK_SP_MP", - "ScanOptions": "IR", - "SequenceName": "_tfl3d1_16", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS3D", "DIS2D"], - "SeriesNumber": 2, - "AcquisitionTime": "14:46:39.237500", - "AcquisitionNumber": 1, - "SliceThickness": 1, - "SAR": 0.0571882, - "EchoTime": 0.00372, - "RepetitionTime": 2, - "InversionTime": 1, - "FlipAngle": 9, - "PartialFourier": 1, - "BaseResolution": 320, - "ShimSetting": [ - 3044, - -4172, - -1039, - -11, - -3, - 35, - -21, - -13 ], - "TxRefAmp": 269.906, - "PhaseResolution": 1, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC1-7;NC1,2", - "PulseSequenceDetails": "%SiemensSeq%_tfl", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 81.25, - "PhaseEncodingSteps": 259, - "AcquisitionMatrixPE": 260, - "ReconMatrixPE": 320, - "ParallelReductionFactorInPlane": 2, - "PixelBandwidth": 150, - "DwellTime": 1.04e-05, - "ImageOrientationPatientDICOM": [ - 0, - 1, - 0, - -0.0314108, - 0, - -0.999507 ], - "InPlanePhaseEncodingDirectionDICOM": "ROW", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 GCC4.9.2" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma_fit", + "InstitutionName": "St_Lucia_Campus", + "InstitutionalDepartmentName": "Gehrmann_Labs_MRI", + "InstitutionAddress": "Cooper_60_St._Lucia_QLD_AU_4072", + "DeviceSerialNumber": "167001", + "StationName": "mrc_Trio", + "BodyPartExamined": "CSPINE", + "PatientPosition": "HFS", + "ProcedureStepDescription": "Research_14057_DTI_spine", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "T1w", + "ProtocolName": "T1w", + "ScanningSequence": "GR_IR", + "SequenceVariant": "SK_SP_MP", + "ScanOptions": "IR", + "SequenceName": "_tfl3d1_16", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS3D", + "DIS2D" + ], + "SeriesNumber": 2, + "AcquisitionTime": "14:46:39.237500", + "AcquisitionNumber": 1, + "SliceThickness": 1, + "SAR": 0.0571882, + "EchoTime": 0.00372, + "RepetitionTime": 2, + "InversionTime": 1, + "FlipAngle": 9, + "PartialFourier": 1, + "BaseResolution": 320, + "ShimSetting": [ + 3044, + -4172, + -1039, + -11, + -3, + 35, + -21, + -13 + ], + "TxRefAmp": 269.906, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC1-7;NC1,2", + "PulseSequenceDetails": "%SiemensSeq%_tfl", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 81.25, + "PhaseEncodingSteps": 259, + "AcquisitionMatrixPE": 260, + "ReconMatrixPE": 320, + "ParallelReductionFactorInPlane": 2, + "PixelBandwidth": 150, + "DwellTime": 1.04e-05, + "ImageOrientationPatientDICOM": [ + 0, + 1, + 0, + -0.0314108, + 0, + -0.999507 + ], + "InPlanePhaseEncodingDirectionDICOM": "ROW", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 GCC4.9.2", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-queensland04/anat/sub-queensland04_space-other_T2star.json b/derivatives/data_preprocessed/sub-queensland04/anat/sub-queensland04_space-other_T2star.json index b63067543b..3c9bbff00b 100644 --- a/derivatives/data_preprocessed/sub-queensland04/anat/sub-queensland04_space-other_T2star.json +++ b/derivatives/data_preprocessed/sub-queensland04/anat/sub-queensland04_space-other_T2star.json @@ -73,5 +73,9 @@ "InPlanePhaseEncodingDirectionDICOM": "COL", "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20180622 GCC4.9.2", - "AcquisitionDuration": 285.0 + "AcquisitionDuration": 285.0, + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-queensland04/anat/sub-queensland04_space-other_T2w.json b/derivatives/data_preprocessed/sub-queensland04/anat/sub-queensland04_space-other_T2w.json index cce4d48036..c5b5b18b0b 100644 --- a/derivatives/data_preprocessed/sub-queensland04/anat/sub-queensland04_space-other_T2w.json +++ b/derivatives/data_preprocessed/sub-queensland04/anat/sub-queensland04_space-other_T2w.json @@ -1,67 +1,80 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma_fit", - "InstitutionName": "St_Lucia_Campus", - "InstitutionalDepartmentName": "Gehrmann_Labs_MRI", - "InstitutionAddress": "Cooper_60_St._Lucia_QLD_AU_4072", - "DeviceSerialNumber": "167001", - "StationName": "mrc_Trio", - "BodyPartExamined": "CSPINE", - "PatientPosition": "HFS", - "ProcedureStepDescription": "Research_14057_DTI_spine", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "T2w", - "ProtocolName": "T2w", - "ScanningSequence": "SE", - "SequenceVariant": "SK_SP_OSP", - "ScanOptions": "PFP", - "SequenceName": "_spcR_100", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS3D", "DIS2D"], - "SeriesNumber": 3, - "AcquisitionTime": "14:51:47.060000", - "AcquisitionNumber": 1, - "SliceThickness": 0.8, - "SAR": 0.475001, - "EchoTime": 0.12, - "RepetitionTime": 1.5, - "FlipAngle": 120, - "PartialFourier": 1, - "BaseResolution": 320, - "ShimSetting": [ - 3044, - -4172, - -1039, - -11, - -3, - 35, - -21, - -13 ], - "TxRefAmp": 281.302, - "PhaseResolution": 1, - "PhaseOversampling": 0.8, - "ReceiveCoilName": "Spine_32", - "ReceiveCoilActiveElements": "HC5-7;NC1,2;SP1", - "PulseSequenceDetails": "%SiemensSeq%_tse_vfl", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 100, - "EchoTrainLength": 76, - "PhaseEncodingSteps": 422, - "AcquisitionMatrixPE": 320, - "ReconMatrixPE": 320, - "ParallelReductionFactorInPlane": 3, - "PixelBandwidth": 625, - "DwellTime": 2.5e-06, - "ImageOrientationPatientDICOM": [ - 2.48e-13, - 1, - 4.89e-12, - -0.050593, - 4.897e-12, - -0.998719 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 GCC4.9.2" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma_fit", + "InstitutionName": "St_Lucia_Campus", + "InstitutionalDepartmentName": "Gehrmann_Labs_MRI", + "InstitutionAddress": "Cooper_60_St._Lucia_QLD_AU_4072", + "DeviceSerialNumber": "167001", + "StationName": "mrc_Trio", + "BodyPartExamined": "CSPINE", + "PatientPosition": "HFS", + "ProcedureStepDescription": "Research_14057_DTI_spine", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "T2w", + "ProtocolName": "T2w", + "ScanningSequence": "SE", + "SequenceVariant": "SK_SP_OSP", + "ScanOptions": "PFP", + "SequenceName": "_spcR_100", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS3D", + "DIS2D" + ], + "SeriesNumber": 3, + "AcquisitionTime": "14:51:47.060000", + "AcquisitionNumber": 1, + "SliceThickness": 0.8, + "SAR": 0.475001, + "EchoTime": 0.12, + "RepetitionTime": 1.5, + "FlipAngle": 120, + "PartialFourier": 1, + "BaseResolution": 320, + "ShimSetting": [ + 3044, + -4172, + -1039, + -11, + -3, + 35, + -21, + -13 + ], + "TxRefAmp": 281.302, + "PhaseResolution": 1, + "PhaseOversampling": 0.8, + "ReceiveCoilName": "Spine_32", + "ReceiveCoilActiveElements": "HC5-7;NC1,2;SP1", + "PulseSequenceDetails": "%SiemensSeq%_tse_vfl", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "EchoTrainLength": 76, + "PhaseEncodingSteps": 422, + "AcquisitionMatrixPE": 320, + "ReconMatrixPE": 320, + "ParallelReductionFactorInPlane": 3, + "PixelBandwidth": 625, + "DwellTime": 2.5e-06, + "ImageOrientationPatientDICOM": [ + 2.48e-13, + 1, + 4.89e-12, + -0.050593, + 4.897e-12, + -0.998719 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 GCC4.9.2", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-queensland05/anat/sub-queensland05_flip-1_mt-on_space-other_MTS.json b/derivatives/data_preprocessed/sub-queensland05/anat/sub-queensland05_flip-1_mt-on_space-other_MTS.json index 06990a1019..2434409cf8 100644 --- a/derivatives/data_preprocessed/sub-queensland05/anat/sub-queensland05_flip-1_mt-on_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-queensland05/anat/sub-queensland05_flip-1_mt-on_space-other_MTS.json @@ -1,65 +1,75 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma_fit", - "InstitutionName": "St_Lucia_Campus", - "InstitutionalDepartmentName": "Gehrmann_Labs_MRI", - "InstitutionAddress": "Cooper_60_St._Lucia_QLD_AU_4072", - "DeviceSerialNumber": "167001", - "StationName": "mrc_Trio", - "BodyPartExamined": "CSPINE", - "PatientPosition": "HFS", - "ProcedureStepDescription": "Research_14057_DTI_spine", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-MT1", - "ProtocolName": "GRE-MT1", - "ScanningSequence": "GR", - "SequenceVariant": "MTC_SP", - "ScanOptions": "MT", - "SequenceName": "_fl3d1", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "DIS2D"], - "SeriesNumber": 8, - "AcquisitionTime": "15:48:53.645000", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SAR": 0.491255, - "EchoTime": 0.00313, - "RepetitionTime": 0.035, - "FlipAngle": 9, - "PartialFourier": 1, - "BaseResolution": 256, - "ShimSetting": [ - 3049, - -4300, - -1060, - -1270, - 31, - 2652, - -301, - -60 ], - "TxRefAmp": 267.007, - "PhaseResolution": 1, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC7;NC1,2;SP1", - "PulseSequenceDetails": "%SiemensSeq%_gre", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 100, - "PhaseEncodingSteps": 255, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 256, - "ParallelReductionFactorInPlane": 2, - "PixelBandwidth": 260, - "DwellTime": 7.5e-06, - "ImageOrientationPatientDICOM": [ - 0.99889, - 0.00377794, - -0.0469547, - -5.34808e-08, - 0.996779, - 0.0801989 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 GCC4.9.2" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma_fit", + "InstitutionName": "St_Lucia_Campus", + "InstitutionalDepartmentName": "Gehrmann_Labs_MRI", + "InstitutionAddress": "Cooper_60_St._Lucia_QLD_AU_4072", + "DeviceSerialNumber": "167001", + "StationName": "mrc_Trio", + "BodyPartExamined": "CSPINE", + "PatientPosition": "HFS", + "ProcedureStepDescription": "Research_14057_DTI_spine", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-MT1", + "ProtocolName": "GRE-MT1", + "ScanningSequence": "GR", + "SequenceVariant": "MTC_SP", + "ScanOptions": "MT", + "SequenceName": "_fl3d1", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "DIS2D" + ], + "SeriesNumber": 8, + "AcquisitionTime": "15:48:53.645000", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SAR": 0.491255, + "EchoTime": 0.00313, + "RepetitionTime": 0.035, + "FlipAngle": 9, + "PartialFourier": 1, + "BaseResolution": 256, + "ShimSetting": [ + 3049, + -4300, + -1060, + -1270, + 31, + 2652, + -301, + -60 + ], + "TxRefAmp": 267.007, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC7;NC1,2;SP1", + "PulseSequenceDetails": "%SiemensSeq%_gre", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 255, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "ParallelReductionFactorInPlane": 2, + "PixelBandwidth": 260, + "DwellTime": 7.5e-06, + "ImageOrientationPatientDICOM": [ + 0.99889, + 0.00377794, + -0.0469547, + -5.34808e-08, + 0.996779, + 0.0801989 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 GCC4.9.2", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-queensland05/anat/sub-queensland05_flip-2_mt-off_space-other_MTS.json b/derivatives/data_preprocessed/sub-queensland05/anat/sub-queensland05_flip-2_mt-off_space-other_MTS.json index 69f01f228f..a3ac4bda4d 100644 --- a/derivatives/data_preprocessed/sub-queensland05/anat/sub-queensland05_flip-2_mt-off_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-queensland05/anat/sub-queensland05_flip-2_mt-off_space-other_MTS.json @@ -1,64 +1,74 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma_fit", - "InstitutionName": "St_Lucia_Campus", - "InstitutionalDepartmentName": "Gehrmann_Labs_MRI", - "InstitutionAddress": "Cooper_60_St._Lucia_QLD_AU_4072", - "DeviceSerialNumber": "167001", - "StationName": "mrc_Trio", - "BodyPartExamined": "CSPINE", - "PatientPosition": "HFS", - "ProcedureStepDescription": "Research_14057_DTI_spine", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-T1w", - "ProtocolName": "GRE-T1w", - "ScanningSequence": "GR", - "SequenceVariant": "SP", - "SequenceName": "_fl3d1", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "DIS2D"], - "SeriesNumber": 10, - "AcquisitionTime": "15:53:29.005000", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SAR": 0.0318515, - "EchoTime": 0.00313, - "RepetitionTime": 0.015, - "FlipAngle": 15, - "PartialFourier": 1, - "BaseResolution": 256, - "ShimSetting": [ - 3049, - -4300, - -1060, - -1270, - 31, - 2652, - -301, - -60 ], - "TxRefAmp": 267.007, - "PhaseResolution": 1, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC7;NC1,2;SP1", - "PulseSequenceDetails": "%SiemensSeq%_gre", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 100, - "PhaseEncodingSteps": 255, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 256, - "ParallelReductionFactorInPlane": 2, - "PixelBandwidth": 260, - "DwellTime": 7.5e-06, - "ImageOrientationPatientDICOM": [ - 0.99889, - 0.00377794, - -0.0469547, - -5.34808e-08, - 0.996779, - 0.0801989 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 GCC4.9.2" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma_fit", + "InstitutionName": "St_Lucia_Campus", + "InstitutionalDepartmentName": "Gehrmann_Labs_MRI", + "InstitutionAddress": "Cooper_60_St._Lucia_QLD_AU_4072", + "DeviceSerialNumber": "167001", + "StationName": "mrc_Trio", + "BodyPartExamined": "CSPINE", + "PatientPosition": "HFS", + "ProcedureStepDescription": "Research_14057_DTI_spine", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-T1w", + "ProtocolName": "GRE-T1w", + "ScanningSequence": "GR", + "SequenceVariant": "SP", + "SequenceName": "_fl3d1", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "DIS2D" + ], + "SeriesNumber": 10, + "AcquisitionTime": "15:53:29.005000", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SAR": 0.0318515, + "EchoTime": 0.00313, + "RepetitionTime": 0.015, + "FlipAngle": 15, + "PartialFourier": 1, + "BaseResolution": 256, + "ShimSetting": [ + 3049, + -4300, + -1060, + -1270, + 31, + 2652, + -301, + -60 + ], + "TxRefAmp": 267.007, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC7;NC1,2;SP1", + "PulseSequenceDetails": "%SiemensSeq%_gre", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 255, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "ParallelReductionFactorInPlane": 2, + "PixelBandwidth": 260, + "DwellTime": 7.5e-06, + "ImageOrientationPatientDICOM": [ + 0.99889, + 0.00377794, + -0.0469547, + -5.34808e-08, + 0.996779, + 0.0801989 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 GCC4.9.2", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-queensland05/anat/sub-queensland05_space-other_T1w.json b/derivatives/data_preprocessed/sub-queensland05/anat/sub-queensland05_space-other_T1w.json index c922854f37..619e12b116 100644 --- a/derivatives/data_preprocessed/sub-queensland05/anat/sub-queensland05_space-other_T1w.json +++ b/derivatives/data_preprocessed/sub-queensland05/anat/sub-queensland05_space-other_T1w.json @@ -1,66 +1,79 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma_fit", - "InstitutionName": "St_Lucia_Campus", - "InstitutionalDepartmentName": "Gehrmann_Labs_MRI", - "InstitutionAddress": "Cooper_60_St._Lucia_QLD_AU_4072", - "DeviceSerialNumber": "167001", - "StationName": "mrc_Trio", - "BodyPartExamined": "CSPINE", - "PatientPosition": "HFS", - "ProcedureStepDescription": "Research_14057_DTI_spine", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "T1w", - "ProtocolName": "T1w", - "ScanningSequence": "GR_IR", - "SequenceVariant": "SK_SP_MP", - "ScanOptions": "IR", - "SequenceName": "_tfl3d1_16", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS3D", "DIS2D"], - "SeriesNumber": 2, - "AcquisitionTime": "15:34:9.175000", - "AcquisitionNumber": 1, - "SliceThickness": 1, - "SAR": 0.060466, - "EchoTime": 0.00372, - "RepetitionTime": 2, - "InversionTime": 1, - "FlipAngle": 9, - "PartialFourier": 1, - "BaseResolution": 320, - "ShimSetting": [ - 3044, - -4172, - -1039, - -11, - -3, - 35, - -21, - -13 ], - "TxRefAmp": 260.811, - "PhaseResolution": 1, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC1-7;NC1,2", - "PulseSequenceDetails": "%SiemensSeq%_tfl", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 81.25, - "PhaseEncodingSteps": 259, - "AcquisitionMatrixPE": 260, - "ReconMatrixPE": 320, - "ParallelReductionFactorInPlane": 2, - "PixelBandwidth": 150, - "DwellTime": 1.04e-05, - "ImageOrientationPatientDICOM": [ - 0, - 1, - 0, - 0, - 0, - -1 ], - "InPlanePhaseEncodingDirectionDICOM": "ROW", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 GCC4.9.2" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma_fit", + "InstitutionName": "St_Lucia_Campus", + "InstitutionalDepartmentName": "Gehrmann_Labs_MRI", + "InstitutionAddress": "Cooper_60_St._Lucia_QLD_AU_4072", + "DeviceSerialNumber": "167001", + "StationName": "mrc_Trio", + "BodyPartExamined": "CSPINE", + "PatientPosition": "HFS", + "ProcedureStepDescription": "Research_14057_DTI_spine", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "T1w", + "ProtocolName": "T1w", + "ScanningSequence": "GR_IR", + "SequenceVariant": "SK_SP_MP", + "ScanOptions": "IR", + "SequenceName": "_tfl3d1_16", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS3D", + "DIS2D" + ], + "SeriesNumber": 2, + "AcquisitionTime": "15:34:9.175000", + "AcquisitionNumber": 1, + "SliceThickness": 1, + "SAR": 0.060466, + "EchoTime": 0.00372, + "RepetitionTime": 2, + "InversionTime": 1, + "FlipAngle": 9, + "PartialFourier": 1, + "BaseResolution": 320, + "ShimSetting": [ + 3044, + -4172, + -1039, + -11, + -3, + 35, + -21, + -13 + ], + "TxRefAmp": 260.811, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC1-7;NC1,2", + "PulseSequenceDetails": "%SiemensSeq%_tfl", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 81.25, + "PhaseEncodingSteps": 259, + "AcquisitionMatrixPE": 260, + "ReconMatrixPE": 320, + "ParallelReductionFactorInPlane": 2, + "PixelBandwidth": 150, + "DwellTime": 1.04e-05, + "ImageOrientationPatientDICOM": [ + 0, + 1, + 0, + 0, + 0, + -1 + ], + "InPlanePhaseEncodingDirectionDICOM": "ROW", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 GCC4.9.2", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-queensland05/anat/sub-queensland05_space-other_T2star.json b/derivatives/data_preprocessed/sub-queensland05/anat/sub-queensland05_space-other_T2star.json index 1679a329ef..e647718939 100644 --- a/derivatives/data_preprocessed/sub-queensland05/anat/sub-queensland05_space-other_T2star.json +++ b/derivatives/data_preprocessed/sub-queensland05/anat/sub-queensland05_space-other_T2star.json @@ -73,5 +73,9 @@ "InPlanePhaseEncodingDirectionDICOM": "COL", "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20180622 GCC4.9.2", - "AcquisitionDuration": 285.0 + "AcquisitionDuration": 285.0, + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-queensland05/anat/sub-queensland05_space-other_T2w.json b/derivatives/data_preprocessed/sub-queensland05/anat/sub-queensland05_space-other_T2w.json index f5c6829871..84a0cd80ba 100644 --- a/derivatives/data_preprocessed/sub-queensland05/anat/sub-queensland05_space-other_T2w.json +++ b/derivatives/data_preprocessed/sub-queensland05/anat/sub-queensland05_space-other_T2w.json @@ -1,67 +1,80 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma_fit", - "InstitutionName": "St_Lucia_Campus", - "InstitutionalDepartmentName": "Gehrmann_Labs_MRI", - "InstitutionAddress": "Cooper_60_St._Lucia_QLD_AU_4072", - "DeviceSerialNumber": "167001", - "StationName": "mrc_Trio", - "BodyPartExamined": "CSPINE", - "PatientPosition": "HFS", - "ProcedureStepDescription": "Research_14057_DTI_spine", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "T2w", - "ProtocolName": "T2w", - "ScanningSequence": "SE", - "SequenceVariant": "SK_SP_OSP", - "ScanOptions": "PFP", - "SequenceName": "_spcR_100", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS3D", "DIS2D"], - "SeriesNumber": 3, - "AcquisitionTime": "15:39:13.102500", - "AcquisitionNumber": 1, - "SliceThickness": 0.8, - "SAR": 0.49669, - "EchoTime": 0.12, - "RepetitionTime": 1.5, - "FlipAngle": 120, - "PartialFourier": 1, - "BaseResolution": 320, - "ShimSetting": [ - 3044, - -4172, - -1039, - -11, - -3, - 35, - -21, - -13 ], - "TxRefAmp": 267.007, - "PhaseResolution": 1, - "PhaseOversampling": 0.8, - "ReceiveCoilName": "Spine_32", - "ReceiveCoilActiveElements": "HC5-7;NC1,2;SP1", - "PulseSequenceDetails": "%SiemensSeq%_tse_vfl", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 100, - "EchoTrainLength": 76, - "PhaseEncodingSteps": 422, - "AcquisitionMatrixPE": 320, - "ReconMatrixPE": 320, - "ParallelReductionFactorInPlane": 3, - "PixelBandwidth": 625, - "DwellTime": 2.5e-06, - "ImageOrientationPatientDICOM": [ - 1.54e-13, - 1, - 4.894e-12, - -0.0314108, - 4.897e-12, - -0.999507 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 GCC4.9.2" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma_fit", + "InstitutionName": "St_Lucia_Campus", + "InstitutionalDepartmentName": "Gehrmann_Labs_MRI", + "InstitutionAddress": "Cooper_60_St._Lucia_QLD_AU_4072", + "DeviceSerialNumber": "167001", + "StationName": "mrc_Trio", + "BodyPartExamined": "CSPINE", + "PatientPosition": "HFS", + "ProcedureStepDescription": "Research_14057_DTI_spine", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "T2w", + "ProtocolName": "T2w", + "ScanningSequence": "SE", + "SequenceVariant": "SK_SP_OSP", + "ScanOptions": "PFP", + "SequenceName": "_spcR_100", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS3D", + "DIS2D" + ], + "SeriesNumber": 3, + "AcquisitionTime": "15:39:13.102500", + "AcquisitionNumber": 1, + "SliceThickness": 0.8, + "SAR": 0.49669, + "EchoTime": 0.12, + "RepetitionTime": 1.5, + "FlipAngle": 120, + "PartialFourier": 1, + "BaseResolution": 320, + "ShimSetting": [ + 3044, + -4172, + -1039, + -11, + -3, + 35, + -21, + -13 + ], + "TxRefAmp": 267.007, + "PhaseResolution": 1, + "PhaseOversampling": 0.8, + "ReceiveCoilName": "Spine_32", + "ReceiveCoilActiveElements": "HC5-7;NC1,2;SP1", + "PulseSequenceDetails": "%SiemensSeq%_tse_vfl", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "EchoTrainLength": 76, + "PhaseEncodingSteps": 422, + "AcquisitionMatrixPE": 320, + "ReconMatrixPE": 320, + "ParallelReductionFactorInPlane": 3, + "PixelBandwidth": 625, + "DwellTime": 2.5e-06, + "ImageOrientationPatientDICOM": [ + 1.54e-13, + 1, + 4.894e-12, + -0.0314108, + 4.897e-12, + -0.999507 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 GCC4.9.2", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-queensland06/anat/sub-queensland06_flip-1_mt-on_space-other_MTS.json b/derivatives/data_preprocessed/sub-queensland06/anat/sub-queensland06_flip-1_mt-on_space-other_MTS.json index 7e33fbf774..8616b8702a 100644 --- a/derivatives/data_preprocessed/sub-queensland06/anat/sub-queensland06_flip-1_mt-on_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-queensland06/anat/sub-queensland06_flip-1_mt-on_space-other_MTS.json @@ -1,65 +1,75 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma_fit", - "InstitutionName": "St_Lucia_Campus", - "InstitutionalDepartmentName": "Gehrmann_Labs_MRI", - "InstitutionAddress": "Cooper_60_St._Lucia_QLD_AU_4072", - "DeviceSerialNumber": "167001", - "StationName": "mrc_Trio", - "BodyPartExamined": "CSPINE", - "PatientPosition": "HFS", - "ProcedureStepDescription": "Research_14057_DTI_spine", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-MT1", - "ProtocolName": "GRE-MT1", - "ScanningSequence": "GR", - "SequenceVariant": "MTC_SP", - "ScanOptions": "MT", - "SequenceName": "_fl3d1", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "DIS2D"], - "SeriesNumber": 8, - "AcquisitionTime": "16:25:19.092500", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SAR": 0.677888, - "EchoTime": 0.00313, - "RepetitionTime": 0.035, - "FlipAngle": 9, - "PartialFourier": 1, - "BaseResolution": 256, - "ShimSetting": [ - 3019, - -4416, - -1003, - -841, - 50, - 1295, - -250, - -99 ], - "TxRefAmp": 309.897, - "PhaseResolution": 1, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC7;NC1,2", - "PulseSequenceDetails": "%SiemensSeq%_gre", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 100, - "PhaseEncodingSteps": 255, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 256, - "ParallelReductionFactorInPlane": 2, - "PixelBandwidth": 260, - "DwellTime": 7.5e-06, - "ImageOrientationPatientDICOM": [ - 1, - 0, - 0, - 0, - 0.992966, - 0.118404 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 GCC4.9.2" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma_fit", + "InstitutionName": "St_Lucia_Campus", + "InstitutionalDepartmentName": "Gehrmann_Labs_MRI", + "InstitutionAddress": "Cooper_60_St._Lucia_QLD_AU_4072", + "DeviceSerialNumber": "167001", + "StationName": "mrc_Trio", + "BodyPartExamined": "CSPINE", + "PatientPosition": "HFS", + "ProcedureStepDescription": "Research_14057_DTI_spine", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-MT1", + "ProtocolName": "GRE-MT1", + "ScanningSequence": "GR", + "SequenceVariant": "MTC_SP", + "ScanOptions": "MT", + "SequenceName": "_fl3d1", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "DIS2D" + ], + "SeriesNumber": 8, + "AcquisitionTime": "16:25:19.092500", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SAR": 0.677888, + "EchoTime": 0.00313, + "RepetitionTime": 0.035, + "FlipAngle": 9, + "PartialFourier": 1, + "BaseResolution": 256, + "ShimSetting": [ + 3019, + -4416, + -1003, + -841, + 50, + 1295, + -250, + -99 + ], + "TxRefAmp": 309.897, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC7;NC1,2", + "PulseSequenceDetails": "%SiemensSeq%_gre", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 255, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "ParallelReductionFactorInPlane": 2, + "PixelBandwidth": 260, + "DwellTime": 7.5e-06, + "ImageOrientationPatientDICOM": [ + 1, + 0, + 0, + 0, + 0.992966, + 0.118404 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 GCC4.9.2", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-queensland06/anat/sub-queensland06_flip-2_mt-off_space-other_MTS.json b/derivatives/data_preprocessed/sub-queensland06/anat/sub-queensland06_flip-2_mt-off_space-other_MTS.json index 968ecb61f1..7283cd9537 100644 --- a/derivatives/data_preprocessed/sub-queensland06/anat/sub-queensland06_flip-2_mt-off_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-queensland06/anat/sub-queensland06_flip-2_mt-off_space-other_MTS.json @@ -1,64 +1,74 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma_fit", - "InstitutionName": "St_Lucia_Campus", - "InstitutionalDepartmentName": "Gehrmann_Labs_MRI", - "InstitutionAddress": "Cooper_60_St._Lucia_QLD_AU_4072", - "DeviceSerialNumber": "167001", - "StationName": "mrc_Trio", - "BodyPartExamined": "CSPINE", - "PatientPosition": "HFS", - "ProcedureStepDescription": "Research_14057_DTI_spine", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-T1w", - "ProtocolName": "GRE-T1w", - "ScanningSequence": "GR", - "SequenceVariant": "SP", - "SequenceName": "_fl3d1", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "DIS2D"], - "SeriesNumber": 10, - "AcquisitionTime": "16:29:56.977500", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SAR": 0.0439522, - "EchoTime": 0.00313, - "RepetitionTime": 0.015, - "FlipAngle": 15, - "PartialFourier": 1, - "BaseResolution": 256, - "ShimSetting": [ - 3019, - -4416, - -1003, - -841, - 50, - 1295, - -250, - -99 ], - "TxRefAmp": 309.897, - "PhaseResolution": 1, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC7;NC1,2", - "PulseSequenceDetails": "%SiemensSeq%_gre", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 100, - "PhaseEncodingSteps": 255, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 256, - "ParallelReductionFactorInPlane": 2, - "PixelBandwidth": 260, - "DwellTime": 7.5e-06, - "ImageOrientationPatientDICOM": [ - 1, - 0, - 0, - 0, - 0.992966, - 0.118404 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 GCC4.9.2" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma_fit", + "InstitutionName": "St_Lucia_Campus", + "InstitutionalDepartmentName": "Gehrmann_Labs_MRI", + "InstitutionAddress": "Cooper_60_St._Lucia_QLD_AU_4072", + "DeviceSerialNumber": "167001", + "StationName": "mrc_Trio", + "BodyPartExamined": "CSPINE", + "PatientPosition": "HFS", + "ProcedureStepDescription": "Research_14057_DTI_spine", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-T1w", + "ProtocolName": "GRE-T1w", + "ScanningSequence": "GR", + "SequenceVariant": "SP", + "SequenceName": "_fl3d1", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "DIS2D" + ], + "SeriesNumber": 10, + "AcquisitionTime": "16:29:56.977500", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SAR": 0.0439522, + "EchoTime": 0.00313, + "RepetitionTime": 0.015, + "FlipAngle": 15, + "PartialFourier": 1, + "BaseResolution": 256, + "ShimSetting": [ + 3019, + -4416, + -1003, + -841, + 50, + 1295, + -250, + -99 + ], + "TxRefAmp": 309.897, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC7;NC1,2", + "PulseSequenceDetails": "%SiemensSeq%_gre", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 255, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "ParallelReductionFactorInPlane": 2, + "PixelBandwidth": 260, + "DwellTime": 7.5e-06, + "ImageOrientationPatientDICOM": [ + 1, + 0, + 0, + 0, + 0.992966, + 0.118404 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 GCC4.9.2", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-queensland06/anat/sub-queensland06_space-other_T1w.json b/derivatives/data_preprocessed/sub-queensland06/anat/sub-queensland06_space-other_T1w.json index d235779959..d02362267f 100644 --- a/derivatives/data_preprocessed/sub-queensland06/anat/sub-queensland06_space-other_T1w.json +++ b/derivatives/data_preprocessed/sub-queensland06/anat/sub-queensland06_space-other_T1w.json @@ -1,66 +1,79 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma_fit", - "InstitutionName": "St_Lucia_Campus", - "InstitutionalDepartmentName": "Gehrmann_Labs_MRI", - "InstitutionAddress": "Cooper_60_St._Lucia_QLD_AU_4072", - "DeviceSerialNumber": "167001", - "StationName": "mrc_Trio", - "BodyPartExamined": "CSPINE", - "PatientPosition": "HFS", - "ProcedureStepDescription": "Research_14057_DTI_spine", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "T1w", - "ProtocolName": "T1w", - "ScanningSequence": "GR_IR", - "SequenceVariant": "SK_SP_MP", - "ScanOptions": "IR", - "SequenceName": "_tfl3d1_16", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS3D", "DIS2D"], - "SeriesNumber": 2, - "AcquisitionTime": "16:11:56.090000", - "AcquisitionNumber": 1, - "SliceThickness": 1, - "SAR": 0.0803299, - "EchoTime": 0.00372, - "RepetitionTime": 2, - "InversionTime": 1, - "FlipAngle": 9, - "PartialFourier": 1, - "BaseResolution": 320, - "ShimSetting": [ - 3044, - -4172, - -1039, - -11, - -3, - 35, - -21, - -13 ], - "TxRefAmp": 293.35, - "PhaseResolution": 1, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC1-7;NC1,2", - "PulseSequenceDetails": "%SiemensSeq%_tfl", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 81.25, - "PhaseEncodingSteps": 259, - "AcquisitionMatrixPE": 260, - "ReconMatrixPE": 320, - "ParallelReductionFactorInPlane": 2, - "PixelBandwidth": 150, - "DwellTime": 1.04e-05, - "ImageOrientationPatientDICOM": [ - 0, - 1, - 0, - 0, - 0, - -1 ], - "InPlanePhaseEncodingDirectionDICOM": "ROW", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 GCC4.9.2" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma_fit", + "InstitutionName": "St_Lucia_Campus", + "InstitutionalDepartmentName": "Gehrmann_Labs_MRI", + "InstitutionAddress": "Cooper_60_St._Lucia_QLD_AU_4072", + "DeviceSerialNumber": "167001", + "StationName": "mrc_Trio", + "BodyPartExamined": "CSPINE", + "PatientPosition": "HFS", + "ProcedureStepDescription": "Research_14057_DTI_spine", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "T1w", + "ProtocolName": "T1w", + "ScanningSequence": "GR_IR", + "SequenceVariant": "SK_SP_MP", + "ScanOptions": "IR", + "SequenceName": "_tfl3d1_16", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS3D", + "DIS2D" + ], + "SeriesNumber": 2, + "AcquisitionTime": "16:11:56.090000", + "AcquisitionNumber": 1, + "SliceThickness": 1, + "SAR": 0.0803299, + "EchoTime": 0.00372, + "RepetitionTime": 2, + "InversionTime": 1, + "FlipAngle": 9, + "PartialFourier": 1, + "BaseResolution": 320, + "ShimSetting": [ + 3044, + -4172, + -1039, + -11, + -3, + 35, + -21, + -13 + ], + "TxRefAmp": 293.35, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC1-7;NC1,2", + "PulseSequenceDetails": "%SiemensSeq%_tfl", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 81.25, + "PhaseEncodingSteps": 259, + "AcquisitionMatrixPE": 260, + "ReconMatrixPE": 320, + "ParallelReductionFactorInPlane": 2, + "PixelBandwidth": 150, + "DwellTime": 1.04e-05, + "ImageOrientationPatientDICOM": [ + 0, + 1, + 0, + 0, + 0, + -1 + ], + "InPlanePhaseEncodingDirectionDICOM": "ROW", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 GCC4.9.2", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-queensland06/anat/sub-queensland06_space-other_T2star.json b/derivatives/data_preprocessed/sub-queensland06/anat/sub-queensland06_space-other_T2star.json index 65da49b043..d515daf922 100644 --- a/derivatives/data_preprocessed/sub-queensland06/anat/sub-queensland06_space-other_T2star.json +++ b/derivatives/data_preprocessed/sub-queensland06/anat/sub-queensland06_space-other_T2star.json @@ -73,5 +73,9 @@ "InPlanePhaseEncodingDirectionDICOM": "COL", "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20180622 GCC4.9.2", - "AcquisitionDuration": 285.0 + "AcquisitionDuration": 285.0, + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-queensland06/anat/sub-queensland06_space-other_T2w.json b/derivatives/data_preprocessed/sub-queensland06/anat/sub-queensland06_space-other_T2w.json index 1044ad38e6..eaade5cd83 100644 --- a/derivatives/data_preprocessed/sub-queensland06/anat/sub-queensland06_space-other_T2w.json +++ b/derivatives/data_preprocessed/sub-queensland06/anat/sub-queensland06_space-other_T2w.json @@ -1,67 +1,80 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma_fit", - "InstitutionName": "St_Lucia_Campus", - "InstitutionalDepartmentName": "Gehrmann_Labs_MRI", - "InstitutionAddress": "Cooper_60_St._Lucia_QLD_AU_4072", - "DeviceSerialNumber": "167001", - "StationName": "mrc_Trio", - "BodyPartExamined": "CSPINE", - "PatientPosition": "HFS", - "ProcedureStepDescription": "Research_14057_DTI_spine", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "T2w", - "ProtocolName": "T2w", - "ScanningSequence": "SE", - "SequenceVariant": "SK_SP_OSP", - "ScanOptions": "PFP", - "SequenceName": "_spcR_100", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS3D", "DIS2D"], - "SeriesNumber": 3, - "AcquisitionTime": "16:16:59.075000", - "AcquisitionNumber": 1, - "SliceThickness": 0.8, - "SAR": 0.685685, - "EchoTime": 0.12, - "RepetitionTime": 1.5, - "FlipAngle": 120, - "PartialFourier": 1, - "BaseResolution": 320, - "ShimSetting": [ - 3044, - -4172, - -1039, - -11, - -3, - 35, - -21, - -13 ], - "TxRefAmp": 310.515, - "PhaseResolution": 1, - "PhaseOversampling": 0.8, - "ReceiveCoilName": "Spine_32", - "ReceiveCoilActiveElements": "HC5-7;NC1,2;SP1", - "PulseSequenceDetails": "%SiemensSeq%_tse_vfl", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 100, - "EchoTrainLength": 76, - "PhaseEncodingSteps": 422, - "AcquisitionMatrixPE": 320, - "ReconMatrixPE": 320, - "ParallelReductionFactorInPlane": 3, - "PixelBandwidth": 625, - "DwellTime": 2.5e-06, - "ImageOrientationPatientDICOM": [ - 0, - 1, - 4.897e-12, - 0, - 4.897e-12, - -1 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 GCC4.9.2" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma_fit", + "InstitutionName": "St_Lucia_Campus", + "InstitutionalDepartmentName": "Gehrmann_Labs_MRI", + "InstitutionAddress": "Cooper_60_St._Lucia_QLD_AU_4072", + "DeviceSerialNumber": "167001", + "StationName": "mrc_Trio", + "BodyPartExamined": "CSPINE", + "PatientPosition": "HFS", + "ProcedureStepDescription": "Research_14057_DTI_spine", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "T2w", + "ProtocolName": "T2w", + "ScanningSequence": "SE", + "SequenceVariant": "SK_SP_OSP", + "ScanOptions": "PFP", + "SequenceName": "_spcR_100", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS3D", + "DIS2D" + ], + "SeriesNumber": 3, + "AcquisitionTime": "16:16:59.075000", + "AcquisitionNumber": 1, + "SliceThickness": 0.8, + "SAR": 0.685685, + "EchoTime": 0.12, + "RepetitionTime": 1.5, + "FlipAngle": 120, + "PartialFourier": 1, + "BaseResolution": 320, + "ShimSetting": [ + 3044, + -4172, + -1039, + -11, + -3, + 35, + -21, + -13 + ], + "TxRefAmp": 310.515, + "PhaseResolution": 1, + "PhaseOversampling": 0.8, + "ReceiveCoilName": "Spine_32", + "ReceiveCoilActiveElements": "HC5-7;NC1,2;SP1", + "PulseSequenceDetails": "%SiemensSeq%_tse_vfl", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "EchoTrainLength": 76, + "PhaseEncodingSteps": 422, + "AcquisitionMatrixPE": 320, + "ReconMatrixPE": 320, + "ParallelReductionFactorInPlane": 3, + "PixelBandwidth": 625, + "DwellTime": 2.5e-06, + "ImageOrientationPatientDICOM": [ + 0, + 1, + 4.897e-12, + 0, + 4.897e-12, + -1 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 GCC4.9.2", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-sherbrooke01/anat/sub-sherbrooke01_flip-1_mt-on_space-other_MTS.json b/derivatives/data_preprocessed/sub-sherbrooke01/anat/sub-sherbrooke01_flip-1_mt-on_space-other_MTS.json index 45968bbb70..7160f5573d 100644 --- a/derivatives/data_preprocessed/sub-sherbrooke01/anat/sub-sherbrooke01_flip-1_mt-on_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-sherbrooke01/anat/sub-sherbrooke01_flip-1_mt-on_space-other_MTS.json @@ -1,13 +1,23 @@ { - "Manufacturer": "Philips", - "ManufacturersModelName": "Ingenia", - "ProtocolName": "WIP_GRE-MT", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "FFE", "M", "FFE"], - "AcquisitionDateTime": "2019-01-10T93:84:0.039062", - "MagneticFieldStrength": 3, - "FlipAngle": 9, - "EchoTime": 0.002001, - "RepetitionTime": 0.057, - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20170130 (openJPEG build)" -} + "Manufacturer": "Philips", + "ManufacturersModelName": "Ingenia", + "ProtocolName": "WIP_GRE-MT", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "FFE", + "M", + "FFE" + ], + "AcquisitionDateTime": "2019-01-10T93:84:0.039062", + "MagneticFieldStrength": 3, + "FlipAngle": 9, + "EchoTime": 0.002001, + "RepetitionTime": 0.057, + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20170130 (openJPEG build)", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-sherbrooke01/anat/sub-sherbrooke01_flip-2_mt-off_space-other_MTS.json b/derivatives/data_preprocessed/sub-sherbrooke01/anat/sub-sherbrooke01_flip-2_mt-off_space-other_MTS.json index c10e971e01..c29ecc3391 100644 --- a/derivatives/data_preprocessed/sub-sherbrooke01/anat/sub-sherbrooke01_flip-2_mt-off_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-sherbrooke01/anat/sub-sherbrooke01_flip-2_mt-off_space-other_MTS.json @@ -1,13 +1,23 @@ { - "Manufacturer": "Philips", - "ManufacturersModelName": "Ingenia", - "ProtocolName": "WIP_GRE-T1", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "FFE", "M", "FFE"], - "AcquisitionDateTime": "2019-01-10T94:30:7.460938", - "MagneticFieldStrength": 3, - "FlipAngle": 15, - "EchoTime": 0.002001, - "RepetitionTime": 0.015, - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20170130 (openJPEG build)" -} + "Manufacturer": "Philips", + "ManufacturersModelName": "Ingenia", + "ProtocolName": "WIP_GRE-T1", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "FFE", + "M", + "FFE" + ], + "AcquisitionDateTime": "2019-01-10T94:30:7.460938", + "MagneticFieldStrength": 3, + "FlipAngle": 15, + "EchoTime": 0.002001, + "RepetitionTime": 0.015, + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20170130 (openJPEG build)", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-sherbrooke01/anat/sub-sherbrooke01_space-other_T1w.json b/derivatives/data_preprocessed/sub-sherbrooke01/anat/sub-sherbrooke01_space-other_T1w.json index f6b65e7e80..8ad2b268d9 100644 --- a/derivatives/data_preprocessed/sub-sherbrooke01/anat/sub-sherbrooke01_space-other_T1w.json +++ b/derivatives/data_preprocessed/sub-sherbrooke01/anat/sub-sherbrooke01_space-other_T1w.json @@ -1,13 +1,24 @@ { - "Manufacturer": "Philips", - "ManufacturersModelName": "Ingenia", - "ProtocolName": "WIP_T1w", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "FFE", "M", "FFE"], - "AcquisitionDateTime": "2019-01-10T91:60:0.101562", - "MagneticFieldStrength": 3, - "FlipAngle": 9, - "EchoTime": 0.003558, - "RepetitionTime": 0.0077864, - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20170130 (openJPEG build)" -} + "Manufacturer": "Philips", + "ManufacturersModelName": "Ingenia", + "ProtocolName": "WIP_T1w", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "FFE", + "M", + "FFE" + ], + "AcquisitionDateTime": "2019-01-10T91:60:0.101562", + "MagneticFieldStrength": 3, + "FlipAngle": 9, + "EchoTime": 0.003558, + "RepetitionTime": 0.0077864, + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20170130 (openJPEG build)", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-sherbrooke01/anat/sub-sherbrooke01_space-other_T2star.json b/derivatives/data_preprocessed/sub-sherbrooke01/anat/sub-sherbrooke01_space-other_T2star.json index cc113f4e26..e33c882cc0 100644 --- a/derivatives/data_preprocessed/sub-sherbrooke01/anat/sub-sherbrooke01_space-other_T2star.json +++ b/derivatives/data_preprocessed/sub-sherbrooke01/anat/sub-sherbrooke01_space-other_T2star.json @@ -17,5 +17,9 @@ "RepetitionTime": 0.625, "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20170130 (openJPEG build)", - "AcquisitionDuration": 242.5 + "AcquisitionDuration": 242.5, + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-sherbrooke01/anat/sub-sherbrooke01_space-other_T2w.json b/derivatives/data_preprocessed/sub-sherbrooke01/anat/sub-sherbrooke01_space-other_T2w.json index 996fecf25c..49994ea99c 100644 --- a/derivatives/data_preprocessed/sub-sherbrooke01/anat/sub-sherbrooke01_space-other_T2w.json +++ b/derivatives/data_preprocessed/sub-sherbrooke01/anat/sub-sherbrooke01_space-other_T2w.json @@ -1,13 +1,24 @@ { - "Manufacturer": "Philips", - "ManufacturersModelName": "Ingenia", - "ProtocolName": "WIP_T2w", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "SE", "M", "SE"], - "AcquisitionDateTime": "2019-01-10T92:04:1.710938", - "MagneticFieldStrength": 3, - "FlipAngle": 90, - "EchoTime": 0.12, - "RepetitionTime": 3.5, - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20170130 (openJPEG build)" -} + "Manufacturer": "Philips", + "ManufacturersModelName": "Ingenia", + "ProtocolName": "WIP_T2w", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "SE", + "M", + "SE" + ], + "AcquisitionDateTime": "2019-01-10T92:04:1.710938", + "MagneticFieldStrength": 3, + "FlipAngle": 90, + "EchoTime": 0.12, + "RepetitionTime": 3.5, + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20170130 (openJPEG build)", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-sherbrooke02/anat/sub-sherbrooke02_flip-1_mt-on_space-other_MTS.json b/derivatives/data_preprocessed/sub-sherbrooke02/anat/sub-sherbrooke02_flip-1_mt-on_space-other_MTS.json index 244ac41841..3a7d535714 100644 --- a/derivatives/data_preprocessed/sub-sherbrooke02/anat/sub-sherbrooke02_flip-1_mt-on_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-sherbrooke02/anat/sub-sherbrooke02_flip-1_mt-on_space-other_MTS.json @@ -1,13 +1,23 @@ { - "Manufacturer": "Philips", - "ManufacturersModelName": "Ingenia", - "ProtocolName": "WIP_GRE-MT", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "FFE", "M", "FFE"], - "AcquisitionDateTime": "2019-01-10T10:27:52.242188", - "MagneticFieldStrength": 3, - "FlipAngle": 9, - "EchoTime": 0.002001, - "RepetitionTime": 0.057, - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20170130 (openJPEG build)" -} + "Manufacturer": "Philips", + "ManufacturersModelName": "Ingenia", + "ProtocolName": "WIP_GRE-MT", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "FFE", + "M", + "FFE" + ], + "AcquisitionDateTime": "2019-01-10T10:27:52.242188", + "MagneticFieldStrength": 3, + "FlipAngle": 9, + "EchoTime": 0.002001, + "RepetitionTime": 0.057, + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20170130 (openJPEG build)", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-sherbrooke02/anat/sub-sherbrooke02_flip-2_mt-off_space-other_MTS.json b/derivatives/data_preprocessed/sub-sherbrooke02/anat/sub-sherbrooke02_flip-2_mt-off_space-other_MTS.json index a3670101d7..71f5a17a4c 100644 --- a/derivatives/data_preprocessed/sub-sherbrooke02/anat/sub-sherbrooke02_flip-2_mt-off_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-sherbrooke02/anat/sub-sherbrooke02_flip-2_mt-off_space-other_MTS.json @@ -1,13 +1,23 @@ { - "Manufacturer": "Philips", - "ManufacturersModelName": "Ingenia", - "ProtocolName": "WIP_GRE-T1", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "FFE", "M", "FFE"], - "AcquisitionDateTime": "2019-01-10T10:32:20.500000", - "MagneticFieldStrength": 3, - "FlipAngle": 15, - "EchoTime": 0.002001, - "RepetitionTime": 0.015, - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20170130 (openJPEG build)" -} + "Manufacturer": "Philips", + "ManufacturersModelName": "Ingenia", + "ProtocolName": "WIP_GRE-T1", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "FFE", + "M", + "FFE" + ], + "AcquisitionDateTime": "2019-01-10T10:32:20.500000", + "MagneticFieldStrength": 3, + "FlipAngle": 15, + "EchoTime": 0.002001, + "RepetitionTime": 0.015, + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20170130 (openJPEG build)", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-sherbrooke02/anat/sub-sherbrooke02_space-other_T1w.json b/derivatives/data_preprocessed/sub-sherbrooke02/anat/sub-sherbrooke02_space-other_T1w.json index 04af20acd0..39cdf48b86 100644 --- a/derivatives/data_preprocessed/sub-sherbrooke02/anat/sub-sherbrooke02_space-other_T1w.json +++ b/derivatives/data_preprocessed/sub-sherbrooke02/anat/sub-sherbrooke02_space-other_T1w.json @@ -1,13 +1,24 @@ { - "Manufacturer": "Philips", - "ManufacturersModelName": "Ingenia", - "ProtocolName": "WIP_T1w", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "FFE", "M", "FFE"], - "AcquisitionDateTime": "2019-01-10T10:22:45.117188", - "MagneticFieldStrength": 3, - "FlipAngle": 9, - "EchoTime": 0.003535, - "RepetitionTime": 0.0077424, - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20170130 (openJPEG build)" -} + "Manufacturer": "Philips", + "ManufacturersModelName": "Ingenia", + "ProtocolName": "WIP_T1w", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "FFE", + "M", + "FFE" + ], + "AcquisitionDateTime": "2019-01-10T10:22:45.117188", + "MagneticFieldStrength": 3, + "FlipAngle": 9, + "EchoTime": 0.003535, + "RepetitionTime": 0.0077424, + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20170130 (openJPEG build)", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-sherbrooke02/anat/sub-sherbrooke02_space-other_T2star.json b/derivatives/data_preprocessed/sub-sherbrooke02/anat/sub-sherbrooke02_space-other_T2star.json index bf68b5351d..a62442c2a0 100644 --- a/derivatives/data_preprocessed/sub-sherbrooke02/anat/sub-sherbrooke02_space-other_T2star.json +++ b/derivatives/data_preprocessed/sub-sherbrooke02/anat/sub-sherbrooke02_space-other_T2star.json @@ -17,5 +17,9 @@ "RepetitionTime": 0.625, "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20170130 (openJPEG build)", - "AcquisitionDuration": 242.5 + "AcquisitionDuration": 242.5, + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-sherbrooke02/anat/sub-sherbrooke02_space-other_T2w.json b/derivatives/data_preprocessed/sub-sherbrooke02/anat/sub-sherbrooke02_space-other_T2w.json index 8a3600225a..c6b533d8c8 100644 --- a/derivatives/data_preprocessed/sub-sherbrooke02/anat/sub-sherbrooke02_space-other_T2w.json +++ b/derivatives/data_preprocessed/sub-sherbrooke02/anat/sub-sherbrooke02_space-other_T2w.json @@ -1,13 +1,24 @@ { - "Manufacturer": "Philips", - "ManufacturersModelName": "Ingenia", - "ProtocolName": "WIP_T2w", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "SE", "M", "SE"], - "AcquisitionDateTime": "2019-01-10T10:03:59.687500", - "MagneticFieldStrength": 3, - "FlipAngle": 90, - "EchoTime": 0.12, - "RepetitionTime": 3.5, - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20170130 (openJPEG build)" -} + "Manufacturer": "Philips", + "ManufacturersModelName": "Ingenia", + "ProtocolName": "WIP_T2w", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "SE", + "M", + "SE" + ], + "AcquisitionDateTime": "2019-01-10T10:03:59.687500", + "MagneticFieldStrength": 3, + "FlipAngle": 90, + "EchoTime": 0.12, + "RepetitionTime": 3.5, + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20170130 (openJPEG build)", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-sherbrooke03/anat/sub-sherbrooke03_flip-1_mt-on_space-other_MTS.json b/derivatives/data_preprocessed/sub-sherbrooke03/anat/sub-sherbrooke03_flip-1_mt-on_space-other_MTS.json index b4a9ba1eda..4dcca4627c 100644 --- a/derivatives/data_preprocessed/sub-sherbrooke03/anat/sub-sherbrooke03_flip-1_mt-on_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-sherbrooke03/anat/sub-sherbrooke03_flip-1_mt-on_space-other_MTS.json @@ -1,13 +1,23 @@ { - "Manufacturer": "Philips", - "ManufacturersModelName": "Ingenia", - "ProtocolName": "WIP_GRE-MT", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "FFE", "M", "FFE"], - "AcquisitionDateTime": "2019-01-10T11:22:50.640625", - "MagneticFieldStrength": 3, - "FlipAngle": 9, - "EchoTime": 0.002001, - "RepetitionTime": 0.0645023, - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20170130 (openJPEG build)" -} + "Manufacturer": "Philips", + "ManufacturersModelName": "Ingenia", + "ProtocolName": "WIP_GRE-MT", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "FFE", + "M", + "FFE" + ], + "AcquisitionDateTime": "2019-01-10T11:22:50.640625", + "MagneticFieldStrength": 3, + "FlipAngle": 9, + "EchoTime": 0.002001, + "RepetitionTime": 0.0645023, + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20170130 (openJPEG build)", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-sherbrooke03/anat/sub-sherbrooke03_flip-2_mt-off_space-other_MTS.json b/derivatives/data_preprocessed/sub-sherbrooke03/anat/sub-sherbrooke03_flip-2_mt-off_space-other_MTS.json index 1985ab5da1..3239dbfffd 100644 --- a/derivatives/data_preprocessed/sub-sherbrooke03/anat/sub-sherbrooke03_flip-2_mt-off_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-sherbrooke03/anat/sub-sherbrooke03_flip-2_mt-off_space-other_MTS.json @@ -1,13 +1,23 @@ { - "Manufacturer": "Philips", - "ManufacturersModelName": "Ingenia", - "ProtocolName": "WIP_GRE-T1", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "FFE", "M", "FFE"], - "AcquisitionDateTime": "2019-01-10T11:16:23.867188", - "MagneticFieldStrength": 3, - "FlipAngle": 15, - "EchoTime": 0.002001, - "RepetitionTime": 0.015, - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20170130 (openJPEG build)" -} + "Manufacturer": "Philips", + "ManufacturersModelName": "Ingenia", + "ProtocolName": "WIP_GRE-T1", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "FFE", + "M", + "FFE" + ], + "AcquisitionDateTime": "2019-01-10T11:16:23.867188", + "MagneticFieldStrength": 3, + "FlipAngle": 15, + "EchoTime": 0.002001, + "RepetitionTime": 0.015, + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20170130 (openJPEG build)", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-sherbrooke03/anat/sub-sherbrooke03_space-other_T1w.json b/derivatives/data_preprocessed/sub-sherbrooke03/anat/sub-sherbrooke03_space-other_T1w.json index a53f41f4b5..9c681b4ca8 100644 --- a/derivatives/data_preprocessed/sub-sherbrooke03/anat/sub-sherbrooke03_space-other_T1w.json +++ b/derivatives/data_preprocessed/sub-sherbrooke03/anat/sub-sherbrooke03_space-other_T1w.json @@ -1,13 +1,24 @@ { - "Manufacturer": "Philips", - "ManufacturersModelName": "Ingenia", - "ProtocolName": "WIP_T1w", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "FFE", "M", "FFE"], - "AcquisitionDateTime": "2019-01-10T10:46:32.218750", - "MagneticFieldStrength": 3, - "FlipAngle": 9, - "EchoTime": 0.003532, - "RepetitionTime": 0.0077372, - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20170130 (openJPEG build)" -} + "Manufacturer": "Philips", + "ManufacturersModelName": "Ingenia", + "ProtocolName": "WIP_T1w", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "FFE", + "M", + "FFE" + ], + "AcquisitionDateTime": "2019-01-10T10:46:32.218750", + "MagneticFieldStrength": 3, + "FlipAngle": 9, + "EchoTime": 0.003532, + "RepetitionTime": 0.0077372, + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20170130 (openJPEG build)", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-sherbrooke03/anat/sub-sherbrooke03_space-other_T2star.json b/derivatives/data_preprocessed/sub-sherbrooke03/anat/sub-sherbrooke03_space-other_T2star.json index e3898bd4bd..22e0731e88 100644 --- a/derivatives/data_preprocessed/sub-sherbrooke03/anat/sub-sherbrooke03_space-other_T2star.json +++ b/derivatives/data_preprocessed/sub-sherbrooke03/anat/sub-sherbrooke03_space-other_T2star.json @@ -17,5 +17,9 @@ "RepetitionTime": 0.625, "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20170130 (openJPEG build)", - "AcquisitionDuration": 242.5 + "AcquisitionDuration": 242.5, + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-sherbrooke03/anat/sub-sherbrooke03_space-other_T2w.json b/derivatives/data_preprocessed/sub-sherbrooke03/anat/sub-sherbrooke03_space-other_T2w.json index 5b3999cea6..c98eff8d28 100644 --- a/derivatives/data_preprocessed/sub-sherbrooke03/anat/sub-sherbrooke03_space-other_T2w.json +++ b/derivatives/data_preprocessed/sub-sherbrooke03/anat/sub-sherbrooke03_space-other_T2w.json @@ -1,13 +1,24 @@ { - "Manufacturer": "Philips", - "ManufacturersModelName": "Ingenia", - "ProtocolName": "WIP_T2w", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "SE", "M", "SE"], - "AcquisitionDateTime": "2019-01-10T10:51:44.320312", - "MagneticFieldStrength": 3, - "FlipAngle": 90, - "EchoTime": 0.12, - "RepetitionTime": 3.5, - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20170130 (openJPEG build)" -} + "Manufacturer": "Philips", + "ManufacturersModelName": "Ingenia", + "ProtocolName": "WIP_T2w", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "SE", + "M", + "SE" + ], + "AcquisitionDateTime": "2019-01-10T10:51:44.320312", + "MagneticFieldStrength": 3, + "FlipAngle": 90, + "EchoTime": 0.12, + "RepetitionTime": 3.5, + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20170130 (openJPEG build)", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-sherbrooke04/anat/sub-sherbrooke04_flip-1_mt-on_space-other_MTS.json b/derivatives/data_preprocessed/sub-sherbrooke04/anat/sub-sherbrooke04_flip-1_mt-on_space-other_MTS.json index d21d9d219f..3b136ff74a 100644 --- a/derivatives/data_preprocessed/sub-sherbrooke04/anat/sub-sherbrooke04_flip-1_mt-on_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-sherbrooke04/anat/sub-sherbrooke04_flip-1_mt-on_space-other_MTS.json @@ -1,13 +1,23 @@ { - "Manufacturer": "Philips", - "ManufacturersModelName": "Ingenia", - "ProtocolName": "WIP_GRE-MT", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "FFE", "M", "FFE"], - "AcquisitionDateTime": "2019-01-10T12:00:56.257812", - "MagneticFieldStrength": 3, - "FlipAngle": 9, - "EchoTime": 0.002001, - "RepetitionTime": 0.057, - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20170130 (openJPEG build)" -} + "Manufacturer": "Philips", + "ManufacturersModelName": "Ingenia", + "ProtocolName": "WIP_GRE-MT", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "FFE", + "M", + "FFE" + ], + "AcquisitionDateTime": "2019-01-10T12:00:56.257812", + "MagneticFieldStrength": 3, + "FlipAngle": 9, + "EchoTime": 0.002001, + "RepetitionTime": 0.057, + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20170130 (openJPEG build)", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-sherbrooke04/anat/sub-sherbrooke04_flip-2_mt-off_space-other_MTS.json b/derivatives/data_preprocessed/sub-sherbrooke04/anat/sub-sherbrooke04_flip-2_mt-off_space-other_MTS.json index 84f88ef163..28f9576750 100644 --- a/derivatives/data_preprocessed/sub-sherbrooke04/anat/sub-sherbrooke04_flip-2_mt-off_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-sherbrooke04/anat/sub-sherbrooke04_flip-2_mt-off_space-other_MTS.json @@ -1,13 +1,23 @@ { - "Manufacturer": "Philips", - "ManufacturersModelName": "Ingenia", - "ProtocolName": "WIP_GRE-T1", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "FFE", "M", "FFE"], - "AcquisitionDateTime": "2019-01-10T12:05:23.703125", - "MagneticFieldStrength": 3, - "FlipAngle": 15, - "EchoTime": 0.002001, - "RepetitionTime": 0.015, - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20170130 (openJPEG build)" -} + "Manufacturer": "Philips", + "ManufacturersModelName": "Ingenia", + "ProtocolName": "WIP_GRE-T1", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "FFE", + "M", + "FFE" + ], + "AcquisitionDateTime": "2019-01-10T12:05:23.703125", + "MagneticFieldStrength": 3, + "FlipAngle": 15, + "EchoTime": 0.002001, + "RepetitionTime": 0.015, + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20170130 (openJPEG build)", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-sherbrooke04/anat/sub-sherbrooke04_space-other_T1w.json b/derivatives/data_preprocessed/sub-sherbrooke04/anat/sub-sherbrooke04_space-other_T1w.json index 38dccaa479..f5c514f14b 100644 --- a/derivatives/data_preprocessed/sub-sherbrooke04/anat/sub-sherbrooke04_space-other_T1w.json +++ b/derivatives/data_preprocessed/sub-sherbrooke04/anat/sub-sherbrooke04_space-other_T1w.json @@ -1,13 +1,24 @@ { - "Manufacturer": "Philips", - "ManufacturersModelName": "Ingenia", - "ProtocolName": "WIP_T1w", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "FFE", "M", "FFE"], - "AcquisitionDateTime": "2019-01-10T11:40:57.312500", - "MagneticFieldStrength": 3, - "FlipAngle": 9, - "EchoTime": 0.003529, - "RepetitionTime": 0.0077301, - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20170130 (openJPEG build)" -} + "Manufacturer": "Philips", + "ManufacturersModelName": "Ingenia", + "ProtocolName": "WIP_T1w", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "FFE", + "M", + "FFE" + ], + "AcquisitionDateTime": "2019-01-10T11:40:57.312500", + "MagneticFieldStrength": 3, + "FlipAngle": 9, + "EchoTime": 0.003529, + "RepetitionTime": 0.0077301, + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20170130 (openJPEG build)", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-sherbrooke04/anat/sub-sherbrooke04_space-other_T2star.json b/derivatives/data_preprocessed/sub-sherbrooke04/anat/sub-sherbrooke04_space-other_T2star.json index 560798eb78..999107625f 100644 --- a/derivatives/data_preprocessed/sub-sherbrooke04/anat/sub-sherbrooke04_space-other_T2star.json +++ b/derivatives/data_preprocessed/sub-sherbrooke04/anat/sub-sherbrooke04_space-other_T2star.json @@ -17,5 +17,9 @@ "RepetitionTime": 0.625, "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20170130 (openJPEG build)", - "AcquisitionDuration": 242.5 + "AcquisitionDuration": 242.5, + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-sherbrooke04/anat/sub-sherbrooke04_space-other_T2w.json b/derivatives/data_preprocessed/sub-sherbrooke04/anat/sub-sherbrooke04_space-other_T2w.json index e40823d16c..882025502a 100644 --- a/derivatives/data_preprocessed/sub-sherbrooke04/anat/sub-sherbrooke04_space-other_T2w.json +++ b/derivatives/data_preprocessed/sub-sherbrooke04/anat/sub-sherbrooke04_space-other_T2w.json @@ -1,13 +1,24 @@ { - "Manufacturer": "Philips", - "ManufacturersModelName": "Ingenia", - "ProtocolName": "WIP_T2w", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "SE", "M", "SE"], - "AcquisitionDateTime": "2019-01-10T11:45:35.609375", - "MagneticFieldStrength": 3, - "FlipAngle": 90, - "EchoTime": 0.12, - "RepetitionTime": 3.5, - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20170130 (openJPEG build)" -} + "Manufacturer": "Philips", + "ManufacturersModelName": "Ingenia", + "ProtocolName": "WIP_T2w", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "SE", + "M", + "SE" + ], + "AcquisitionDateTime": "2019-01-10T11:45:35.609375", + "MagneticFieldStrength": 3, + "FlipAngle": 90, + "EchoTime": 0.12, + "RepetitionTime": 3.5, + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20170130 (openJPEG build)", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-sherbrooke05/anat/sub-sherbrooke05_flip-1_mt-on_space-other_MTS.json b/derivatives/data_preprocessed/sub-sherbrooke05/anat/sub-sherbrooke05_flip-1_mt-on_space-other_MTS.json index 88b4d777d5..5068ab348d 100644 --- a/derivatives/data_preprocessed/sub-sherbrooke05/anat/sub-sherbrooke05_flip-1_mt-on_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-sherbrooke05/anat/sub-sherbrooke05_flip-1_mt-on_space-other_MTS.json @@ -1,13 +1,23 @@ { - "Manufacturer": "Philips", - "ManufacturersModelName": "Ingenia", - "ProtocolName": "WIP_GRE-MT", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "FFE", "M", "FFE"], - "AcquisitionDateTime": "2019-01-10T13:37:8.750000", - "MagneticFieldStrength": 3, - "FlipAngle": 9, - "EchoTime": 0.002001, - "RepetitionTime": 0.057, - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20170130 (openJPEG build)" -} + "Manufacturer": "Philips", + "ManufacturersModelName": "Ingenia", + "ProtocolName": "WIP_GRE-MT", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "FFE", + "M", + "FFE" + ], + "AcquisitionDateTime": "2019-01-10T13:37:8.750000", + "MagneticFieldStrength": 3, + "FlipAngle": 9, + "EchoTime": 0.002001, + "RepetitionTime": 0.057, + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20170130 (openJPEG build)", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-sherbrooke05/anat/sub-sherbrooke05_flip-2_mt-off_space-other_MTS.json b/derivatives/data_preprocessed/sub-sherbrooke05/anat/sub-sherbrooke05_flip-2_mt-off_space-other_MTS.json index 83b7ab35e0..dd6093d795 100644 --- a/derivatives/data_preprocessed/sub-sherbrooke05/anat/sub-sherbrooke05_flip-2_mt-off_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-sherbrooke05/anat/sub-sherbrooke05_flip-2_mt-off_space-other_MTS.json @@ -1,13 +1,23 @@ { - "Manufacturer": "Philips", - "ManufacturersModelName": "Ingenia", - "ProtocolName": "WIP_GRE-T1", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "FFE", "M", "FFE"], - "AcquisitionDateTime": "2019-01-10T13:41:35.937500", - "MagneticFieldStrength": 3, - "FlipAngle": 15, - "EchoTime": 0.002001, - "RepetitionTime": 0.015, - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20170130 (openJPEG build)" -} + "Manufacturer": "Philips", + "ManufacturersModelName": "Ingenia", + "ProtocolName": "WIP_GRE-T1", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "FFE", + "M", + "FFE" + ], + "AcquisitionDateTime": "2019-01-10T13:41:35.937500", + "MagneticFieldStrength": 3, + "FlipAngle": 15, + "EchoTime": 0.002001, + "RepetitionTime": 0.015, + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20170130 (openJPEG build)", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-sherbrooke05/anat/sub-sherbrooke05_space-other_T1w.json b/derivatives/data_preprocessed/sub-sherbrooke05/anat/sub-sherbrooke05_space-other_T1w.json index 75bf1dab12..f97851638e 100644 --- a/derivatives/data_preprocessed/sub-sherbrooke05/anat/sub-sherbrooke05_space-other_T1w.json +++ b/derivatives/data_preprocessed/sub-sherbrooke05/anat/sub-sherbrooke05_space-other_T1w.json @@ -1,13 +1,24 @@ { - "Manufacturer": "Philips", - "ManufacturersModelName": "Ingenia", - "ProtocolName": "WIP_T1w", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "FFE", "M", "FFE"], - "AcquisitionDateTime": "2019-01-10T13:47:12.765625", - "MagneticFieldStrength": 3, - "FlipAngle": 9, - "EchoTime": 0.003527, - "RepetitionTime": 0.0077261, - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20170130 (openJPEG build)" -} + "Manufacturer": "Philips", + "ManufacturersModelName": "Ingenia", + "ProtocolName": "WIP_T1w", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "FFE", + "M", + "FFE" + ], + "AcquisitionDateTime": "2019-01-10T13:47:12.765625", + "MagneticFieldStrength": 3, + "FlipAngle": 9, + "EchoTime": 0.003527, + "RepetitionTime": 0.0077261, + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20170130 (openJPEG build)", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-sherbrooke05/anat/sub-sherbrooke05_space-other_T2star.json b/derivatives/data_preprocessed/sub-sherbrooke05/anat/sub-sherbrooke05_space-other_T2star.json index 9a53eb0ca0..5e36d83565 100644 --- a/derivatives/data_preprocessed/sub-sherbrooke05/anat/sub-sherbrooke05_space-other_T2star.json +++ b/derivatives/data_preprocessed/sub-sherbrooke05/anat/sub-sherbrooke05_space-other_T2star.json @@ -17,5 +17,9 @@ "RepetitionTime": 0.625, "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20170130 (openJPEG build)", - "AcquisitionDuration": 242.5 + "AcquisitionDuration": 242.5, + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-sherbrooke05/anat/sub-sherbrooke05_space-other_T2w.json b/derivatives/data_preprocessed/sub-sherbrooke05/anat/sub-sherbrooke05_space-other_T2w.json index e9c4ab54f5..469d7ed62a 100644 --- a/derivatives/data_preprocessed/sub-sherbrooke05/anat/sub-sherbrooke05_space-other_T2w.json +++ b/derivatives/data_preprocessed/sub-sherbrooke05/anat/sub-sherbrooke05_space-other_T2w.json @@ -1,13 +1,24 @@ { - "Manufacturer": "Philips", - "ManufacturersModelName": "Ingenia", - "ProtocolName": "WIP_T2w", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "SE", "M", "SE"], - "AcquisitionDateTime": "2019-01-10T13:16:1.718750", - "MagneticFieldStrength": 3, - "FlipAngle": 90, - "EchoTime": 0.12, - "RepetitionTime": 3.5, - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20170130 (openJPEG build)" -} + "Manufacturer": "Philips", + "ManufacturersModelName": "Ingenia", + "ProtocolName": "WIP_T2w", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "SE", + "M", + "SE" + ], + "AcquisitionDateTime": "2019-01-10T13:16:1.718750", + "MagneticFieldStrength": 3, + "FlipAngle": 90, + "EchoTime": 0.12, + "RepetitionTime": 3.5, + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20170130 (openJPEG build)", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-sherbrooke06/anat/sub-sherbrooke06_flip-1_mt-on_space-other_MTS.json b/derivatives/data_preprocessed/sub-sherbrooke06/anat/sub-sherbrooke06_flip-1_mt-on_space-other_MTS.json index bae82de3ab..b0352a00a8 100644 --- a/derivatives/data_preprocessed/sub-sherbrooke06/anat/sub-sherbrooke06_flip-1_mt-on_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-sherbrooke06/anat/sub-sherbrooke06_flip-1_mt-on_space-other_MTS.json @@ -1,13 +1,23 @@ { - "Manufacturer": "Philips", - "ManufacturersModelName": "Ingenia", - "ProtocolName": "WIP_GRE-MT", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "FFE", "M", "FFE"], - "AcquisitionDateTime": "2019-01-10T14:21:6.015625", - "MagneticFieldStrength": 3, - "FlipAngle": 9, - "EchoTime": 0.002001, - "RepetitionTime": 0.057, - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20170130 (openJPEG build)" -} + "Manufacturer": "Philips", + "ManufacturersModelName": "Ingenia", + "ProtocolName": "WIP_GRE-MT", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "FFE", + "M", + "FFE" + ], + "AcquisitionDateTime": "2019-01-10T14:21:6.015625", + "MagneticFieldStrength": 3, + "FlipAngle": 9, + "EchoTime": 0.002001, + "RepetitionTime": 0.057, + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20170130 (openJPEG build)", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-sherbrooke06/anat/sub-sherbrooke06_flip-2_mt-off_space-other_MTS.json b/derivatives/data_preprocessed/sub-sherbrooke06/anat/sub-sherbrooke06_flip-2_mt-off_space-other_MTS.json index 6f5f3bf3f9..57b808f901 100644 --- a/derivatives/data_preprocessed/sub-sherbrooke06/anat/sub-sherbrooke06_flip-2_mt-off_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-sherbrooke06/anat/sub-sherbrooke06_flip-2_mt-off_space-other_MTS.json @@ -1,13 +1,23 @@ { - "Manufacturer": "Philips", - "ManufacturersModelName": "Ingenia", - "ProtocolName": "WIP_GRE-T1", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "FFE", "M", "FFE"], - "AcquisitionDateTime": "2019-01-10T14:25:34.718750", - "MagneticFieldStrength": 3, - "FlipAngle": 15, - "EchoTime": 0.002001, - "RepetitionTime": 0.015, - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20170130 (openJPEG build)" -} + "Manufacturer": "Philips", + "ManufacturersModelName": "Ingenia", + "ProtocolName": "WIP_GRE-T1", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "FFE", + "M", + "FFE" + ], + "AcquisitionDateTime": "2019-01-10T14:25:34.718750", + "MagneticFieldStrength": 3, + "FlipAngle": 15, + "EchoTime": 0.002001, + "RepetitionTime": 0.015, + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20170130 (openJPEG build)", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-sherbrooke06/anat/sub-sherbrooke06_space-other_T1w.json b/derivatives/data_preprocessed/sub-sherbrooke06/anat/sub-sherbrooke06_space-other_T1w.json index a7c7bff4d5..456ef62ce3 100644 --- a/derivatives/data_preprocessed/sub-sherbrooke06/anat/sub-sherbrooke06_space-other_T1w.json +++ b/derivatives/data_preprocessed/sub-sherbrooke06/anat/sub-sherbrooke06_space-other_T1w.json @@ -1,13 +1,24 @@ { - "Manufacturer": "Philips", - "ManufacturersModelName": "Ingenia", - "ProtocolName": "WIP_T1w", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "FFE", "M", "FFE"], - "AcquisitionDateTime": "2019-01-10T13:58:52.125000", - "MagneticFieldStrength": 3, - "FlipAngle": 9, - "EchoTime": 0.00355, - "RepetitionTime": 0.0077705, - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20170130 (openJPEG build)" -} + "Manufacturer": "Philips", + "ManufacturersModelName": "Ingenia", + "ProtocolName": "WIP_T1w", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "FFE", + "M", + "FFE" + ], + "AcquisitionDateTime": "2019-01-10T13:58:52.125000", + "MagneticFieldStrength": 3, + "FlipAngle": 9, + "EchoTime": 0.00355, + "RepetitionTime": 0.0077705, + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20170130 (openJPEG build)", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-sherbrooke06/anat/sub-sherbrooke06_space-other_T2star.json b/derivatives/data_preprocessed/sub-sherbrooke06/anat/sub-sherbrooke06_space-other_T2star.json index bca4edac38..691ed164b7 100644 --- a/derivatives/data_preprocessed/sub-sherbrooke06/anat/sub-sherbrooke06_space-other_T2star.json +++ b/derivatives/data_preprocessed/sub-sherbrooke06/anat/sub-sherbrooke06_space-other_T2star.json @@ -17,5 +17,9 @@ "RepetitionTime": 0.625, "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20170130 (openJPEG build)", - "AcquisitionDuration": 242.5 + "AcquisitionDuration": 242.5, + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-sherbrooke06/anat/sub-sherbrooke06_space-other_T2w.json b/derivatives/data_preprocessed/sub-sherbrooke06/anat/sub-sherbrooke06_space-other_T2w.json index 16e5ef42f2..b8d8e41303 100644 --- a/derivatives/data_preprocessed/sub-sherbrooke06/anat/sub-sherbrooke06_space-other_T2w.json +++ b/derivatives/data_preprocessed/sub-sherbrooke06/anat/sub-sherbrooke06_space-other_T2w.json @@ -1,13 +1,24 @@ { - "Manufacturer": "Philips", - "ManufacturersModelName": "Ingenia", - "ProtocolName": "WIP_T2w", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "SE", "M", "SE"], - "AcquisitionDateTime": "2019-01-10T14:03:29.750000", - "MagneticFieldStrength": 3, - "FlipAngle": 90, - "EchoTime": 0.12, - "RepetitionTime": 3.5, - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20170130 (openJPEG build)" -} + "Manufacturer": "Philips", + "ManufacturersModelName": "Ingenia", + "ProtocolName": "WIP_T2w", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "SE", + "M", + "SE" + ], + "AcquisitionDateTime": "2019-01-10T14:03:29.750000", + "MagneticFieldStrength": 3, + "FlipAngle": 90, + "EchoTime": 0.12, + "RepetitionTime": 3.5, + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20170130 (openJPEG build)", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-sherbrooke07/anat/sub-sherbrooke07_flip-1_mt-on_space-other_MTS.json b/derivatives/data_preprocessed/sub-sherbrooke07/anat/sub-sherbrooke07_flip-1_mt-on_space-other_MTS.json index 74c2a2940d..470e16e991 100644 --- a/derivatives/data_preprocessed/sub-sherbrooke07/anat/sub-sherbrooke07_flip-1_mt-on_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-sherbrooke07/anat/sub-sherbrooke07_flip-1_mt-on_space-other_MTS.json @@ -1,13 +1,23 @@ { - "Manufacturer": "Philips", - "ManufacturersModelName": "Ingenia", - "ProtocolName": "WIP_GRE-MT", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "FFE", "M", "FFE"], - "AcquisitionDateTime": "2019-01-10T15:18:30.781250", - "MagneticFieldStrength": 3, - "FlipAngle": 9, - "EchoTime": 0.002001, - "RepetitionTime": 0.057, - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20170130 (openJPEG build)" -} + "Manufacturer": "Philips", + "ManufacturersModelName": "Ingenia", + "ProtocolName": "WIP_GRE-MT", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "FFE", + "M", + "FFE" + ], + "AcquisitionDateTime": "2019-01-10T15:18:30.781250", + "MagneticFieldStrength": 3, + "FlipAngle": 9, + "EchoTime": 0.002001, + "RepetitionTime": 0.057, + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20170130 (openJPEG build)", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-sherbrooke07/anat/sub-sherbrooke07_flip-2_mt-off_space-other_MTS.json b/derivatives/data_preprocessed/sub-sherbrooke07/anat/sub-sherbrooke07_flip-2_mt-off_space-other_MTS.json index 0ca0e09618..7b13b0f22c 100644 --- a/derivatives/data_preprocessed/sub-sherbrooke07/anat/sub-sherbrooke07_flip-2_mt-off_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-sherbrooke07/anat/sub-sherbrooke07_flip-2_mt-off_space-other_MTS.json @@ -1,13 +1,23 @@ { - "Manufacturer": "Philips", - "ManufacturersModelName": "Ingenia", - "ProtocolName": "WIP_GRE-T1", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "FFE", "M", "FFE"], - "AcquisitionDateTime": "2019-01-10T15:22:57.484375", - "MagneticFieldStrength": 3, - "FlipAngle": 15, - "EchoTime": 0.002001, - "RepetitionTime": 0.015, - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20170130 (openJPEG build)" -} + "Manufacturer": "Philips", + "ManufacturersModelName": "Ingenia", + "ProtocolName": "WIP_GRE-T1", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "FFE", + "M", + "FFE" + ], + "AcquisitionDateTime": "2019-01-10T15:22:57.484375", + "MagneticFieldStrength": 3, + "FlipAngle": 15, + "EchoTime": 0.002001, + "RepetitionTime": 0.015, + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20170130 (openJPEG build)", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-sherbrooke07/anat/sub-sherbrooke07_space-other_T1w.json b/derivatives/data_preprocessed/sub-sherbrooke07/anat/sub-sherbrooke07_space-other_T1w.json index fe1e7cb50b..161e8fe87b 100644 --- a/derivatives/data_preprocessed/sub-sherbrooke07/anat/sub-sherbrooke07_space-other_T1w.json +++ b/derivatives/data_preprocessed/sub-sherbrooke07/anat/sub-sherbrooke07_space-other_T1w.json @@ -1,13 +1,24 @@ { - "Manufacturer": "Philips", - "ManufacturersModelName": "Ingenia", - "ProtocolName": "WIP_T1w", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "FFE", "M", "FFE"], - "AcquisitionDateTime": "2019-01-10T14:57:18.515625", - "MagneticFieldStrength": 3, - "FlipAngle": 9, - "EchoTime": 0.00353, - "RepetitionTime": 0.0077327, - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20170130 (openJPEG build)" -} + "Manufacturer": "Philips", + "ManufacturersModelName": "Ingenia", + "ProtocolName": "WIP_T1w", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "FFE", + "M", + "FFE" + ], + "AcquisitionDateTime": "2019-01-10T14:57:18.515625", + "MagneticFieldStrength": 3, + "FlipAngle": 9, + "EchoTime": 0.00353, + "RepetitionTime": 0.0077327, + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20170130 (openJPEG build)", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-sherbrooke07/anat/sub-sherbrooke07_space-other_T2star.json b/derivatives/data_preprocessed/sub-sherbrooke07/anat/sub-sherbrooke07_space-other_T2star.json index f788c00f07..aad6b916fe 100644 --- a/derivatives/data_preprocessed/sub-sherbrooke07/anat/sub-sherbrooke07_space-other_T2star.json +++ b/derivatives/data_preprocessed/sub-sherbrooke07/anat/sub-sherbrooke07_space-other_T2star.json @@ -17,5 +17,9 @@ "RepetitionTime": 0.625, "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20170130 (openJPEG build)", - "AcquisitionDuration": 242.5 + "AcquisitionDuration": 242.5, + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-sherbrooke07/anat/sub-sherbrooke07_space-other_T2w.json b/derivatives/data_preprocessed/sub-sherbrooke07/anat/sub-sherbrooke07_space-other_T2w.json index ce99be09d3..2955c46114 100644 --- a/derivatives/data_preprocessed/sub-sherbrooke07/anat/sub-sherbrooke07_space-other_T2w.json +++ b/derivatives/data_preprocessed/sub-sherbrooke07/anat/sub-sherbrooke07_space-other_T2w.json @@ -1,13 +1,24 @@ { - "Manufacturer": "Philips", - "ManufacturersModelName": "Ingenia", - "ProtocolName": "WIP_T2w", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "SE", "M", "SE"], - "AcquisitionDateTime": "2019-01-10T15:02:31.312500", - "MagneticFieldStrength": 3, - "FlipAngle": 90, - "EchoTime": 0.12, - "RepetitionTime": 3.5, - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20170130 (openJPEG build)" -} + "Manufacturer": "Philips", + "ManufacturersModelName": "Ingenia", + "ProtocolName": "WIP_T2w", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "SE", + "M", + "SE" + ], + "AcquisitionDateTime": "2019-01-10T15:02:31.312500", + "MagneticFieldStrength": 3, + "FlipAngle": 90, + "EchoTime": 0.12, + "RepetitionTime": 3.5, + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20170130 (openJPEG build)", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-stanford01/anat/sub-stanford01_flip-1_mt-on_space-other_MTS.json b/derivatives/data_preprocessed/sub-stanford01/anat/sub-stanford01_flip-1_mt-on_space-other_MTS.json index 8c78f14788..32e726617d 100644 --- a/derivatives/data_preprocessed/sub-stanford01/anat/sub-stanford01_flip-1_mt-on_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-stanford01/anat/sub-stanford01_flip-1_mt-on_space-other_MTS.json @@ -1,42 +1,50 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "GE", - "ManufacturersModelName": "DISCOVERY_MR750", - "InstitutionName": "Stanford_Lucas_Center", - "DeviceSerialNumber": "0000415723SCHMR2", - "StationName": "lc3t3", - "BodyPartExamined": "NECK", - "PatientPosition": "HFS", - "SoftwareVersions": "27_LX_MR_Software_release:DV26.0_R01_1725.a", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-MT1", - "ProtocolName": "GRE-MT1", - "ScanningSequence": "GR", - "SequenceVariant": "SS_SP", - "ScanOptions": "EDR_GEMS_MT_GEMS_FILTERED_GEMS_PFF", - "ImageType": ["ORIGINAL", "PRIMARY", "OTHER"], - "SeriesNumber": 7, - "AcquisitionTime": "21:09:4.000000", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SpacingBetweenSlices": 5, - "SAR": 1.54309, - "EchoTime": 0.004, - "RepetitionTime": 0.108, - "FlipAngle": 9, - "PercentPhaseFOV": 100, - "AcquisitionMatrixPE": 192, - "ReconMatrixPE": 192, - "PixelBandwidth": 434.062, - "ImageOrientationPatientDICOM": [ - 1, - -0, - 0, - 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"RepetitionTime": 0.108, + "FlipAngle": 9, + "PercentPhaseFOV": 100, + "AcquisitionMatrixPE": 192, + "ReconMatrixPE": 192, + "PixelBandwidth": 434.062, + "ImageOrientationPatientDICOM": [ + 1, + 0, + 0, + 0, + 0.99926, + -0.03837 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20171215 (OpenJPEG build) GCC7.3.0", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-stanford01/anat/sub-stanford01_flip-2_mt-off_space-other_MTS.json b/derivatives/data_preprocessed/sub-stanford01/anat/sub-stanford01_flip-2_mt-off_space-other_MTS.json index 5562c92c85..e7363f6139 100644 --- a/derivatives/data_preprocessed/sub-stanford01/anat/sub-stanford01_flip-2_mt-off_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-stanford01/anat/sub-stanford01_flip-2_mt-off_space-other_MTS.json @@ -1,42 +1,50 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "GE", - "ManufacturersModelName": "DISCOVERY_MR750", - "InstitutionName": "Stanford_Lucas_Center", - "DeviceSerialNumber": "0000415723SCHMR2", - "StationName": "lc3t3", - "BodyPartExamined": "NECK", - "PatientPosition": "HFS", - "SoftwareVersions": "27_LX_MR_Software_release:DV26.0_R01_1725.a", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-T1w", - "ProtocolName": "GRE-T1w", - "ScanningSequence": "GR", - "SequenceVariant": "SS_SP", - "ScanOptions": "EDR_GEMS_FILTERED_GEMS_PFF", - "ImageType": ["ORIGINAL", "PRIMARY", "OTHER"], - "SeriesNumber": 9, - "AcquisitionTime": "21:32:35.000000", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SpacingBetweenSlices": 5, - "SAR": 0.0760819, - "EchoTime": 0.004, - "RepetitionTime": 0.015, - "FlipAngle": 15, - "PercentPhaseFOV": 100, - "AcquisitionMatrixPE": 192, - "ReconMatrixPE": 192, - "PixelBandwidth": 434.062, - "ImageOrientationPatientDICOM": [ - 1, - -0, - 0, - -0, - 0.99926, - -0.03837 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20171215 (OpenJPEG build) GCC7.3.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "GE", + "ManufacturersModelName": "DISCOVERY_MR750", + "InstitutionName": "Stanford_Lucas_Center", + "DeviceSerialNumber": "0000415723SCHMR2", + "StationName": "lc3t3", + "BodyPartExamined": "NECK", + "PatientPosition": "HFS", + "SoftwareVersions": "27_LX_MR_Software_release:DV26.0_R01_1725.a", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-T1w", + "ProtocolName": "GRE-T1w", + "ScanningSequence": "GR", + "SequenceVariant": "SS_SP", + "ScanOptions": "EDR_GEMS_FILTERED_GEMS_PFF", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "OTHER" + ], + "SeriesNumber": 9, + "AcquisitionTime": "21:32:35.000000", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SpacingBetweenSlices": 5, + "SAR": 0.0760819, + "EchoTime": 0.004, + "RepetitionTime": 0.015, + "FlipAngle": 15, + "PercentPhaseFOV": 100, + "AcquisitionMatrixPE": 192, + "ReconMatrixPE": 192, + "PixelBandwidth": 434.062, + "ImageOrientationPatientDICOM": [ + 1, + 0, + 0, + 0, + 0.99926, + -0.03837 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20171215 (OpenJPEG build) GCC7.3.0", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-stanford01/anat/sub-stanford01_space-other_T1w.json b/derivatives/data_preprocessed/sub-stanford01/anat/sub-stanford01_space-other_T1w.json index f017b07135..9006026f96 100644 --- a/derivatives/data_preprocessed/sub-stanford01/anat/sub-stanford01_space-other_T1w.json +++ b/derivatives/data_preprocessed/sub-stanford01/anat/sub-stanford01_space-other_T1w.json @@ -1,43 +1,52 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "GE", - "ManufacturersModelName": "DISCOVERY_MR750", - "InstitutionName": "Stanford_Lucas_Center", - "DeviceSerialNumber": "0000415723SCHMR2", - "StationName": "lc3t3", - "BodyPartExamined": "HEAD", - "PatientPosition": "HFS", - "SoftwareVersions": "27_LX_MR_Software_release:DV26.0_R01_1725.a", - "MRAcquisitionType": "3D", - "SeriesDescription": "T1w", - "ProtocolName": "T1w", - "ScanningSequence": "GR", - "SequenceVariant": "SS_SP_SK", - "ScanOptions": "FAST_GEMS_EDR_GEMS_FILTERED_GEMS_ACC_GEMS_PFF_IR_GEMS", - "ImageType": ["ORIGINAL", "PRIMARY", "OTHER"], - "SeriesNumber": 4, - "AcquisitionTime": "20:48:44.000000", - "AcquisitionNumber": 1, - "SliceThickness": 1, - "SpacingBetweenSlices": 1, - "SAR": 0.409303, - "EchoTime": 0.0013, - "RepetitionTime": 0.003624, - "InversionTime": 1, - "FlipAngle": 9, - "PercentPhaseFOV": 80, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 320, - "PixelBandwidth": 892.875, - "ImageOrientationPatientDICOM": [ - -0, - 1, - 0, - -0, - -0, - -1 ], - "InPlanePhaseEncodingDirectionDICOM": "ROW", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20171215 (OpenJPEG build) GCC7.3.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "GE", + "ManufacturersModelName": "DISCOVERY_MR750", + "InstitutionName": "Stanford_Lucas_Center", + "DeviceSerialNumber": "0000415723SCHMR2", + "StationName": "lc3t3", + "BodyPartExamined": "HEAD", + "PatientPosition": "HFS", + "SoftwareVersions": "27_LX_MR_Software_release:DV26.0_R01_1725.a", + "MRAcquisitionType": "3D", + "SeriesDescription": "T1w", + "ProtocolName": "T1w", + "ScanningSequence": "GR", + "SequenceVariant": "SS_SP_SK", + "ScanOptions": "FAST_GEMS_EDR_GEMS_FILTERED_GEMS_ACC_GEMS_PFF_IR_GEMS", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "OTHER" + ], + "SeriesNumber": 4, + "AcquisitionTime": "20:48:44.000000", + "AcquisitionNumber": 1, + "SliceThickness": 1, + "SpacingBetweenSlices": 1, + "SAR": 0.409303, + "EchoTime": 0.0013, + "RepetitionTime": 0.003624, + "InversionTime": 1, + "FlipAngle": 9, + "PercentPhaseFOV": 80, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 320, + "PixelBandwidth": 892.875, + "ImageOrientationPatientDICOM": [ + 0, + 1, + 0, + 0, + 0, + -1 + ], + "InPlanePhaseEncodingDirectionDICOM": "ROW", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20171215 (OpenJPEG build) GCC7.3.0", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-stanford01/anat/sub-stanford01_space-other_T2star.json b/derivatives/data_preprocessed/sub-stanford01/anat/sub-stanford01_space-other_T2star.json index 63e0845d33..71ec4b805b 100644 --- a/derivatives/data_preprocessed/sub-stanford01/anat/sub-stanford01_space-other_T2star.json +++ b/derivatives/data_preprocessed/sub-stanford01/anat/sub-stanford01_space-other_T2star.json @@ -45,5 +45,9 @@ "InPlanePhaseEncodingDirectionDICOM": "COL", "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20171215 (OpenJPEG build) GCC7.3.0", - "AcquisitionDuration": 288.0 + "AcquisitionDuration": 288.0, + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-stanford01/anat/sub-stanford01_space-other_T2w.json b/derivatives/data_preprocessed/sub-stanford01/anat/sub-stanford01_space-other_T2w.json index 6950f58701..856d4e0eb9 100644 --- a/derivatives/data_preprocessed/sub-stanford01/anat/sub-stanford01_space-other_T2w.json +++ b/derivatives/data_preprocessed/sub-stanford01/anat/sub-stanford01_space-other_T2w.json @@ -1,43 +1,52 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "GE", - "ManufacturersModelName": "DISCOVERY_MR750", - "InstitutionName": "Stanford_Lucas_Center", - "DeviceSerialNumber": "0000415723SCHMR2", - "StationName": "lc3t3", - "BodyPartExamined": "CSPINE", - "PatientPosition": "HFS", - "SoftwareVersions": "27_LX_MR_Software_release:DV26.0_R01_1725.a", - "MRAcquisitionType": "3D", - "SeriesDescription": "ORIG_T2w", - "ProtocolName": "ORIG_T2w", - "ScanningSequence": "SE", - "SequenceVariant": "SK_OSP", - "ScanOptions": "FC_FREQ_AX_GEMS_FC_NPW_EDR_GEMS_ACC_GEMS", - "ImageType": ["ORIGINAL", "PRIMARY", "OTHER"], - "SeriesNumber": 40005, - "AcquisitionTime": "20:54:44.000000", - "AcquisitionNumber": 1, - "SliceThickness": 0.8, - "SpacingBetweenSlices": 0.8, - "SAR": 1.0135, - "EchoTime": 0.136337, - "RepetitionTime": 2.502, - "FlipAngle": 90, - "PercentPhaseFOV": 100, - "EchoTrainLength": 78, - "AcquisitionMatrixPE": 320, - "ReconMatrixPE": 320, - "PixelBandwidth": 520.812, - "ImageOrientationPatientDICOM": [ - -0, - 1, - 0, - -0, - -0, - -1 ], - "InPlanePhaseEncodingDirectionDICOM": "ROW", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20171215 (OpenJPEG build) GCC7.3.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "GE", + "ManufacturersModelName": "DISCOVERY_MR750", + "InstitutionName": "Stanford_Lucas_Center", + "DeviceSerialNumber": "0000415723SCHMR2", + "StationName": "lc3t3", + "BodyPartExamined": "CSPINE", + "PatientPosition": "HFS", + "SoftwareVersions": "27_LX_MR_Software_release:DV26.0_R01_1725.a", + "MRAcquisitionType": "3D", + "SeriesDescription": "ORIG_T2w", + "ProtocolName": "ORIG_T2w", + "ScanningSequence": "SE", + "SequenceVariant": "SK_OSP", + "ScanOptions": "FC_FREQ_AX_GEMS_FC_NPW_EDR_GEMS_ACC_GEMS", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "OTHER" + ], + "SeriesNumber": 40005, + "AcquisitionTime": "20:54:44.000000", + "AcquisitionNumber": 1, + "SliceThickness": 0.8, + "SpacingBetweenSlices": 0.8, + "SAR": 1.0135, + "EchoTime": 0.136337, + "RepetitionTime": 2.502, + "FlipAngle": 90, + "PercentPhaseFOV": 100, + "EchoTrainLength": 78, + "AcquisitionMatrixPE": 320, + "ReconMatrixPE": 320, + "PixelBandwidth": 520.812, + "ImageOrientationPatientDICOM": [ + 0, + 1, + 0, + 0, + 0, + -1 + ], + "InPlanePhaseEncodingDirectionDICOM": "ROW", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20171215 (OpenJPEG build) GCC7.3.0", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-stanford02/anat/sub-stanford02_flip-1_mt-on_space-other_MTS.json b/derivatives/data_preprocessed/sub-stanford02/anat/sub-stanford02_flip-1_mt-on_space-other_MTS.json index fab56255fa..ecb7ea9304 100644 --- a/derivatives/data_preprocessed/sub-stanford02/anat/sub-stanford02_flip-1_mt-on_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-stanford02/anat/sub-stanford02_flip-1_mt-on_space-other_MTS.json @@ -1,42 +1,50 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "GE", - "ManufacturersModelName": "DISCOVERY_MR750", - "InstitutionName": "Stanford_Lucas_Center", - "DeviceSerialNumber": "0000415723SCHMR2", - "StationName": "lc3t3", - "BodyPartExamined": "NECK", - "PatientPosition": "HFS", - "SoftwareVersions": "27_LX_MR_Software_release:DV26.0_R01_1725.a", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-MT1", - "ProtocolName": "GRE-MT1", - "ScanningSequence": "GR", - "SequenceVariant": "SS_SP", - "ScanOptions": "EDR_GEMS_MT_GEMS_FILTERED_GEMS_PFF", - "ImageType": ["ORIGINAL", "PRIMARY", "OTHER"], - "SeriesNumber": 7, - "AcquisitionTime": "22:14:8.000000", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SpacingBetweenSlices": 5, - "SAR": 1.32228, - "EchoTime": 0.004, - "RepetitionTime": 0.108, - "FlipAngle": 9, - "PercentPhaseFOV": 100, - "AcquisitionMatrixPE": 192, - "ReconMatrixPE": 192, - "PixelBandwidth": 434.062, - "ImageOrientationPatientDICOM": [ - 0.99653, - -0, - 0.08318, - -0.00601, - 0.99739, - 0.07196 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20171215 (OpenJPEG build) GCC7.3.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "GE", + "ManufacturersModelName": "DISCOVERY_MR750", + "InstitutionName": "Stanford_Lucas_Center", + "DeviceSerialNumber": "0000415723SCHMR2", + "StationName": "lc3t3", + "BodyPartExamined": "NECK", + "PatientPosition": "HFS", + "SoftwareVersions": "27_LX_MR_Software_release:DV26.0_R01_1725.a", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-MT1", + "ProtocolName": "GRE-MT1", + "ScanningSequence": "GR", + "SequenceVariant": "SS_SP", + "ScanOptions": "EDR_GEMS_MT_GEMS_FILTERED_GEMS_PFF", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "OTHER" + ], + "SeriesNumber": 7, + "AcquisitionTime": "22:14:8.000000", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SpacingBetweenSlices": 5, + "SAR": 1.32228, + "EchoTime": 0.004, + "RepetitionTime": 0.108, + "FlipAngle": 9, + "PercentPhaseFOV": 100, + "AcquisitionMatrixPE": 192, + "ReconMatrixPE": 192, + "PixelBandwidth": 434.062, + "ImageOrientationPatientDICOM": [ + 0.99653, + 0, + 0.08318, + -0.00601, + 0.99739, + 0.07196 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20171215 (OpenJPEG build) GCC7.3.0", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-stanford02/anat/sub-stanford02_flip-2_mt-off_space-other_MTS.json b/derivatives/data_preprocessed/sub-stanford02/anat/sub-stanford02_flip-2_mt-off_space-other_MTS.json index d2547ba330..b662ce3d9f 100644 --- a/derivatives/data_preprocessed/sub-stanford02/anat/sub-stanford02_flip-2_mt-off_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-stanford02/anat/sub-stanford02_flip-2_mt-off_space-other_MTS.json @@ -1,42 +1,50 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "GE", - "ManufacturersModelName": "DISCOVERY_MR750", - "InstitutionName": "Stanford_Lucas_Center", - "DeviceSerialNumber": "0000415723SCHMR2", - "StationName": "lc3t3", - "BodyPartExamined": "NECK", - "PatientPosition": "HFS", - "SoftwareVersions": "27_LX_MR_Software_release:DV26.0_R01_1725.a", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-T1w", - "ProtocolName": "GRE-T1w", - "ScanningSequence": "GR", - "SequenceVariant": "SS_SP", - "ScanOptions": "EDR_GEMS_FILTERED_GEMS_PFF", - "ImageType": ["ORIGINAL", "PRIMARY", "OTHER"], - "SeriesNumber": 9, - "AcquisitionTime": "22:38:59.000000", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SpacingBetweenSlices": 5, - "SAR": 0.0651951, - "EchoTime": 0.004, - "RepetitionTime": 0.015, - "FlipAngle": 15, - "PercentPhaseFOV": 100, - "AcquisitionMatrixPE": 192, - "ReconMatrixPE": 192, - "PixelBandwidth": 434.062, - "ImageOrientationPatientDICOM": [ - 0.99653, - -0, - 0.08318, - -0.00601, - 0.99739, - 0.07196 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20171215 (OpenJPEG build) GCC7.3.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "GE", + "ManufacturersModelName": "DISCOVERY_MR750", + "InstitutionName": "Stanford_Lucas_Center", + "DeviceSerialNumber": "0000415723SCHMR2", + "StationName": "lc3t3", + "BodyPartExamined": "NECK", + "PatientPosition": "HFS", + "SoftwareVersions": "27_LX_MR_Software_release:DV26.0_R01_1725.a", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-T1w", + "ProtocolName": "GRE-T1w", + "ScanningSequence": "GR", + "SequenceVariant": "SS_SP", + "ScanOptions": "EDR_GEMS_FILTERED_GEMS_PFF", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "OTHER" + ], + "SeriesNumber": 9, + "AcquisitionTime": "22:38:59.000000", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SpacingBetweenSlices": 5, + "SAR": 0.0651951, + "EchoTime": 0.004, + "RepetitionTime": 0.015, + "FlipAngle": 15, + "PercentPhaseFOV": 100, + "AcquisitionMatrixPE": 192, + "ReconMatrixPE": 192, + "PixelBandwidth": 434.062, + "ImageOrientationPatientDICOM": [ + 0.99653, + 0, + 0.08318, + -0.00601, + 0.99739, + 0.07196 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20171215 (OpenJPEG build) GCC7.3.0", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-stanford02/anat/sub-stanford02_space-other_T1w.json b/derivatives/data_preprocessed/sub-stanford02/anat/sub-stanford02_space-other_T1w.json index 66e1d486e6..72130e9d7c 100644 --- a/derivatives/data_preprocessed/sub-stanford02/anat/sub-stanford02_space-other_T1w.json +++ b/derivatives/data_preprocessed/sub-stanford02/anat/sub-stanford02_space-other_T1w.json @@ -1,43 +1,52 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "GE", - "ManufacturersModelName": "DISCOVERY_MR750", - "InstitutionName": "Stanford_Lucas_Center", - "DeviceSerialNumber": "0000415723SCHMR2", - "StationName": "lc3t3", - "BodyPartExamined": "HEAD", - "PatientPosition": "HFS", - "SoftwareVersions": "27_LX_MR_Software_release:DV26.0_R01_1725.a", - "MRAcquisitionType": "3D", - "SeriesDescription": "T1w", - "ProtocolName": "T1w", - "ScanningSequence": "GR", - "SequenceVariant": "SS_SP_SK", - "ScanOptions": "FAST_GEMS_EDR_GEMS_FILTERED_GEMS_ACC_GEMS_PFF_IR_GEMS", - "ImageType": ["ORIGINAL", "PRIMARY", "OTHER"], - "SeriesNumber": 4, - "AcquisitionTime": "21:54:48.000000", - "AcquisitionNumber": 1, - "SliceThickness": 1, - "SpacingBetweenSlices": 1, - "SAR": 0.401017, - "EchoTime": 0.001256, - "RepetitionTime": 0.00352, - "InversionTime": 1, - "FlipAngle": 9, - "PercentPhaseFOV": 80, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 320, - "PixelBandwidth": 892.875, - "ImageOrientationPatientDICOM": [ - -0, - 1, - 0, - 0.05379, - -0, - -0.99855 ], - "InPlanePhaseEncodingDirectionDICOM": "ROW", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20171215 (OpenJPEG build) GCC7.3.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "GE", + "ManufacturersModelName": "DISCOVERY_MR750", + "InstitutionName": "Stanford_Lucas_Center", + "DeviceSerialNumber": "0000415723SCHMR2", + "StationName": "lc3t3", + "BodyPartExamined": "HEAD", + "PatientPosition": "HFS", + "SoftwareVersions": "27_LX_MR_Software_release:DV26.0_R01_1725.a", + "MRAcquisitionType": "3D", + "SeriesDescription": "T1w", + "ProtocolName": "T1w", + "ScanningSequence": "GR", + "SequenceVariant": "SS_SP_SK", + "ScanOptions": "FAST_GEMS_EDR_GEMS_FILTERED_GEMS_ACC_GEMS_PFF_IR_GEMS", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "OTHER" + ], + "SeriesNumber": 4, + "AcquisitionTime": "21:54:48.000000", + "AcquisitionNumber": 1, + "SliceThickness": 1, + "SpacingBetweenSlices": 1, + "SAR": 0.401017, + "EchoTime": 0.001256, + "RepetitionTime": 0.00352, + "InversionTime": 1, + "FlipAngle": 9, + "PercentPhaseFOV": 80, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 320, + "PixelBandwidth": 892.875, + "ImageOrientationPatientDICOM": [ + 0, + 1, + 0, + 0.05379, + 0, + -0.99855 + ], + "InPlanePhaseEncodingDirectionDICOM": "ROW", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20171215 (OpenJPEG build) GCC7.3.0", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-stanford02/anat/sub-stanford02_space-other_T2star.json b/derivatives/data_preprocessed/sub-stanford02/anat/sub-stanford02_space-other_T2star.json index 61c1f762f5..15ec159cb0 100644 --- a/derivatives/data_preprocessed/sub-stanford02/anat/sub-stanford02_space-other_T2star.json +++ b/derivatives/data_preprocessed/sub-stanford02/anat/sub-stanford02_space-other_T2star.json @@ -45,5 +45,9 @@ "InPlanePhaseEncodingDirectionDICOM": "COL", "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20171215 (OpenJPEG build) GCC7.3.0", - "AcquisitionDuration": 288.0 + "AcquisitionDuration": 288.0, + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-stanford02/anat/sub-stanford02_space-other_T2w.json b/derivatives/data_preprocessed/sub-stanford02/anat/sub-stanford02_space-other_T2w.json index 1092d9aeb6..a3b9bbc7c6 100644 --- a/derivatives/data_preprocessed/sub-stanford02/anat/sub-stanford02_space-other_T2w.json +++ b/derivatives/data_preprocessed/sub-stanford02/anat/sub-stanford02_space-other_T2w.json @@ -1,43 +1,52 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "GE", - "ManufacturersModelName": "DISCOVERY_MR750", - "InstitutionName": "Stanford_Lucas_Center", - "DeviceSerialNumber": "0000415723SCHMR2", - "StationName": "lc3t3", - "BodyPartExamined": "CSPINE", - "PatientPosition": "HFS", - "SoftwareVersions": "27_LX_MR_Software_release:DV26.0_R01_1725.a", - "MRAcquisitionType": "3D", - "SeriesDescription": "T2w", - "ProtocolName": "T2w", - "ScanningSequence": "SE", - "SequenceVariant": "SK_OSP", - "ScanOptions": "FC_FREQ_AX_GEMS_FC_NPW_EDR_GEMS_FILTERED_GEMS_ACC_GEMS", - "ImageType": ["ORIGINAL", "PRIMARY", "OTHER"], - "SeriesNumber": 5, - "AcquisitionTime": "22:01:21.000000", - "AcquisitionNumber": 1, - "SliceThickness": 0.8, - "SpacingBetweenSlices": 0.8, - "SAR": 1.0756, - "EchoTime": 0.136169, - "RepetitionTime": 2.502, - "FlipAngle": 90, - "PercentPhaseFOV": 100, - "EchoTrainLength": 78, - "AcquisitionMatrixPE": 320, - "ReconMatrixPE": 320, - "PixelBandwidth": 520.812, - "ImageOrientationPatientDICOM": [ - -0, - 1, - 0, - 0.07366, - -0, - -0.99728 ], - "InPlanePhaseEncodingDirectionDICOM": "ROW", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20171215 (OpenJPEG build) GCC7.3.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "GE", + "ManufacturersModelName": "DISCOVERY_MR750", + "InstitutionName": "Stanford_Lucas_Center", + "DeviceSerialNumber": "0000415723SCHMR2", + "StationName": "lc3t3", + "BodyPartExamined": "CSPINE", + "PatientPosition": "HFS", + "SoftwareVersions": "27_LX_MR_Software_release:DV26.0_R01_1725.a", + "MRAcquisitionType": "3D", + "SeriesDescription": "T2w", + "ProtocolName": "T2w", + "ScanningSequence": "SE", + "SequenceVariant": "SK_OSP", + "ScanOptions": "FC_FREQ_AX_GEMS_FC_NPW_EDR_GEMS_FILTERED_GEMS_ACC_GEMS", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "OTHER" + ], + "SeriesNumber": 5, + "AcquisitionTime": "22:01:21.000000", + "AcquisitionNumber": 1, + "SliceThickness": 0.8, + "SpacingBetweenSlices": 0.8, + "SAR": 1.0756, + "EchoTime": 0.136169, + "RepetitionTime": 2.502, + "FlipAngle": 90, + "PercentPhaseFOV": 100, + "EchoTrainLength": 78, + "AcquisitionMatrixPE": 320, + "ReconMatrixPE": 320, + "PixelBandwidth": 520.812, + "ImageOrientationPatientDICOM": [ + 0, + 1, + 0, + 0.07366, + 0, + -0.99728 + ], + "InPlanePhaseEncodingDirectionDICOM": "ROW", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20171215 (OpenJPEG build) GCC7.3.0", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-stanford03/anat/sub-stanford03_flip-1_mt-on_space-other_MTS.json b/derivatives/data_preprocessed/sub-stanford03/anat/sub-stanford03_flip-1_mt-on_space-other_MTS.json index 265405b7f7..0d39dc8bee 100644 --- a/derivatives/data_preprocessed/sub-stanford03/anat/sub-stanford03_flip-1_mt-on_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-stanford03/anat/sub-stanford03_flip-1_mt-on_space-other_MTS.json @@ -1,42 +1,50 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "GE", - "ManufacturersModelName": "DISCOVERY_MR750", - "InstitutionName": "Stanford_Lucas_Center", - "DeviceSerialNumber": "0000415723SCHMR2", - "StationName": "lc3t3", - "BodyPartExamined": "NECK", - "PatientPosition": "HFS", - "SoftwareVersions": "27_LX_MR_Software_release:DV26.0_R01_1725.a", - "MRAcquisitionType": "3D", - "SeriesDescription": "ORIG_GRE-MT1", - "ProtocolName": "ORIG_GRE-MT1", - "ScanningSequence": "GR", - "SequenceVariant": "SS_SP", - "ScanOptions": "EDR_GEMS_MT_GEMS_PFF", - "ImageType": ["ORIGINAL", "PRIMARY", "OTHER"], - "SeriesNumber": 40007, - "AcquisitionTime": "13:52:38.000000", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SpacingBetweenSlices": 5, - "SAR": 0.675773, - "EchoTime": 0.004, - "RepetitionTime": 0.108, - "FlipAngle": 9, - "PercentPhaseFOV": 100, - "AcquisitionMatrixPE": 192, - "ReconMatrixPE": 192, - "PixelBandwidth": 434.062, - "ImageOrientationPatientDICOM": [ - 1, - -0, - 0, - -0, - 0.99926, - -0.03837 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20171215 (OpenJPEG build) GCC7.3.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "GE", + "ManufacturersModelName": "DISCOVERY_MR750", + "InstitutionName": "Stanford_Lucas_Center", + "DeviceSerialNumber": "0000415723SCHMR2", + "StationName": "lc3t3", + "BodyPartExamined": "NECK", + "PatientPosition": "HFS", + "SoftwareVersions": "27_LX_MR_Software_release:DV26.0_R01_1725.a", + "MRAcquisitionType": "3D", + "SeriesDescription": "ORIG_GRE-MT1", + "ProtocolName": "ORIG_GRE-MT1", + "ScanningSequence": "GR", + "SequenceVariant": "SS_SP", + "ScanOptions": "EDR_GEMS_MT_GEMS_PFF", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "OTHER" + ], + "SeriesNumber": 40007, + "AcquisitionTime": "13:52:38.000000", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SpacingBetweenSlices": 5, + "SAR": 0.675773, + "EchoTime": 0.004, + "RepetitionTime": 0.108, + "FlipAngle": 9, + "PercentPhaseFOV": 100, + "AcquisitionMatrixPE": 192, + "ReconMatrixPE": 192, + "PixelBandwidth": 434.062, + "ImageOrientationPatientDICOM": [ + 1, + 0, + 0, + 0, + 0.99926, + -0.03837 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20171215 (OpenJPEG build) GCC7.3.0", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-stanford03/anat/sub-stanford03_flip-2_mt-off_space-other_MTS.json b/derivatives/data_preprocessed/sub-stanford03/anat/sub-stanford03_flip-2_mt-off_space-other_MTS.json index 92bcc93c61..54d0da5b05 100644 --- a/derivatives/data_preprocessed/sub-stanford03/anat/sub-stanford03_flip-2_mt-off_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-stanford03/anat/sub-stanford03_flip-2_mt-off_space-other_MTS.json @@ -1,42 +1,50 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "GE", - "ManufacturersModelName": "DISCOVERY_MR750", - "InstitutionName": "Stanford_Lucas_Center", - "DeviceSerialNumber": "0000415723SCHMR2", - "StationName": "lc3t3", - "BodyPartExamined": "NECK", - "PatientPosition": "HFS", - "SoftwareVersions": "27_LX_MR_Software_release:DV26.0_R01_1725.a", - "MRAcquisitionType": "3D", - "SeriesDescription": "ORIG_GRE-T1w", - "ProtocolName": "ORIG_GRE-T1w", - "ScanningSequence": "GR", - "SequenceVariant": "SS_SP", - "ScanOptions": "EDR_GEMS_PFF", - "ImageType": ["ORIGINAL", "PRIMARY", "OTHER"], - "SeriesNumber": 40009, - "AcquisitionTime": "14:16:42.000000", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SpacingBetweenSlices": 5, - "SAR": 0.033319, - "EchoTime": 0.004, - "RepetitionTime": 0.015, - "FlipAngle": 15, - "PercentPhaseFOV": 100, - "AcquisitionMatrixPE": 192, - "ReconMatrixPE": 192, - "PixelBandwidth": 434.062, - "ImageOrientationPatientDICOM": [ - 1, - -0, - 0, - -0, - 0.99926, - -0.03837 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20171215 (OpenJPEG build) GCC7.3.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "GE", + "ManufacturersModelName": "DISCOVERY_MR750", + "InstitutionName": "Stanford_Lucas_Center", + "DeviceSerialNumber": "0000415723SCHMR2", + "StationName": "lc3t3", + "BodyPartExamined": "NECK", + "PatientPosition": "HFS", + "SoftwareVersions": "27_LX_MR_Software_release:DV26.0_R01_1725.a", + "MRAcquisitionType": "3D", + "SeriesDescription": "ORIG_GRE-T1w", + "ProtocolName": "ORIG_GRE-T1w", + "ScanningSequence": "GR", + "SequenceVariant": "SS_SP", + "ScanOptions": "EDR_GEMS_PFF", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "OTHER" + ], + "SeriesNumber": 40009, + "AcquisitionTime": "14:16:42.000000", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SpacingBetweenSlices": 5, + "SAR": 0.033319, + "EchoTime": 0.004, + "RepetitionTime": 0.015, + "FlipAngle": 15, + "PercentPhaseFOV": 100, + "AcquisitionMatrixPE": 192, + "ReconMatrixPE": 192, + "PixelBandwidth": 434.062, + "ImageOrientationPatientDICOM": [ + 1, + 0, + 0, + 0, + 0.99926, + -0.03837 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20171215 (OpenJPEG build) GCC7.3.0", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-stanford03/anat/sub-stanford03_space-other_T1w.json b/derivatives/data_preprocessed/sub-stanford03/anat/sub-stanford03_space-other_T1w.json index 0ce8bd8abc..2666bcbfd1 100644 --- a/derivatives/data_preprocessed/sub-stanford03/anat/sub-stanford03_space-other_T1w.json +++ b/derivatives/data_preprocessed/sub-stanford03/anat/sub-stanford03_space-other_T1w.json @@ -1,43 +1,52 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "GE", - "ManufacturersModelName": "DISCOVERY_MR750", - "InstitutionName": "Stanford_Lucas_Center", - "DeviceSerialNumber": "0000415723SCHMR2", - "StationName": "lc3t3", - "BodyPartExamined": "HEAD", - "PatientPosition": "HFS", - "SoftwareVersions": "27_LX_MR_Software_release:DV26.0_R01_1725.a", - "MRAcquisitionType": "3D", - "SeriesDescription": "ORIG_T1w", - "ProtocolName": "ORIG_T1w", - "ScanningSequence": "GR", - "SequenceVariant": "SS_SP_SK", - "ScanOptions": "FAST_GEMS_EDR_GEMS_ACC_GEMS_PFF_IR_GEMS", - "ImageType": ["ORIGINAL", "PRIMARY", "OTHER"], - "SeriesNumber": 40004, - "AcquisitionTime": "13:35:14.000000", - "AcquisitionNumber": 1, - "SliceThickness": 1, - "SpacingBetweenSlices": 1, - "SAR": 0.185271, - "EchoTime": 0.001276, - "RepetitionTime": 0.003532, - "InversionTime": 1, - "FlipAngle": 9, - "PercentPhaseFOV": 80, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 320, - "PixelBandwidth": 892.875, - "ImageOrientationPatientDICOM": [ - -0, - 1, - 0, - -0, - -0, - -1 ], - "InPlanePhaseEncodingDirectionDICOM": "ROW", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20171215 (OpenJPEG build) GCC7.3.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "GE", + "ManufacturersModelName": "DISCOVERY_MR750", + "InstitutionName": "Stanford_Lucas_Center", + "DeviceSerialNumber": "0000415723SCHMR2", + "StationName": "lc3t3", + "BodyPartExamined": "HEAD", + "PatientPosition": "HFS", + "SoftwareVersions": "27_LX_MR_Software_release:DV26.0_R01_1725.a", + "MRAcquisitionType": "3D", + "SeriesDescription": "ORIG_T1w", + "ProtocolName": "ORIG_T1w", + "ScanningSequence": "GR", + "SequenceVariant": "SS_SP_SK", + "ScanOptions": "FAST_GEMS_EDR_GEMS_ACC_GEMS_PFF_IR_GEMS", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "OTHER" + ], + "SeriesNumber": 40004, + "AcquisitionTime": "13:35:14.000000", + "AcquisitionNumber": 1, + "SliceThickness": 1, + "SpacingBetweenSlices": 1, + "SAR": 0.185271, + "EchoTime": 0.001276, + "RepetitionTime": 0.003532, + "InversionTime": 1, + "FlipAngle": 9, + "PercentPhaseFOV": 80, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 320, + "PixelBandwidth": 892.875, + "ImageOrientationPatientDICOM": [ + 0, + 1, + 0, + 0, + 0, + -1 + ], + "InPlanePhaseEncodingDirectionDICOM": "ROW", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20171215 (OpenJPEG build) GCC7.3.0", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-stanford03/anat/sub-stanford03_space-other_T2star.json b/derivatives/data_preprocessed/sub-stanford03/anat/sub-stanford03_space-other_T2star.json index 899b7ace9b..68d40d2128 100644 --- a/derivatives/data_preprocessed/sub-stanford03/anat/sub-stanford03_space-other_T2star.json +++ b/derivatives/data_preprocessed/sub-stanford03/anat/sub-stanford03_space-other_T2star.json @@ -45,5 +45,9 @@ "InPlanePhaseEncodingDirectionDICOM": "COL", "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20171215 (OpenJPEG build) GCC7.3.0", - "AcquisitionDuration": 288.0 + "AcquisitionDuration": 288.0, + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-stanford03/anat/sub-stanford03_space-other_T2w.json b/derivatives/data_preprocessed/sub-stanford03/anat/sub-stanford03_space-other_T2w.json index cdf50d18df..98359c4937 100644 --- a/derivatives/data_preprocessed/sub-stanford03/anat/sub-stanford03_space-other_T2w.json +++ b/derivatives/data_preprocessed/sub-stanford03/anat/sub-stanford03_space-other_T2w.json @@ -1,43 +1,52 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "GE", - "ManufacturersModelName": "DISCOVERY_MR750", - "InstitutionName": "Stanford_Lucas_Center", - "DeviceSerialNumber": "0000415723SCHMR2", - "StationName": "lc3t3", - "BodyPartExamined": "CSPINE", - "PatientPosition": "HFS", - "SoftwareVersions": "27_LX_MR_Software_release:DV26.0_R01_1725.a", - "MRAcquisitionType": "3D", - "SeriesDescription": "T2w", - "ProtocolName": "T2w", - "ScanningSequence": "SE", - "SequenceVariant": "SK_OSP", - "ScanOptions": "FC_FREQ_AX_GEMS_FC_NPW_EDR_GEMS_FILTERED_GEMS_ACC_GEMS", - "ImageType": ["ORIGINAL", "PRIMARY", "OTHER"], - "SeriesNumber": 5, - "AcquisitionTime": "13:41:23.000000", - "AcquisitionNumber": 1, - "SliceThickness": 0.8, - "SpacingBetweenSlices": 0.8, - "SAR": 0.4405, - "EchoTime": 0.134986, - "RepetitionTime": 2.502, - "FlipAngle": 90, - "PercentPhaseFOV": 100, - "EchoTrainLength": 78, - "AcquisitionMatrixPE": 320, - "ReconMatrixPE": 320, - "PixelBandwidth": 520.812, - "ImageOrientationPatientDICOM": [ - -0, - 1, - 0, - -0.02962, - -0, - -0.99956 ], - "InPlanePhaseEncodingDirectionDICOM": "ROW", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20171215 (OpenJPEG build) GCC7.3.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "GE", + "ManufacturersModelName": "DISCOVERY_MR750", + "InstitutionName": "Stanford_Lucas_Center", + "DeviceSerialNumber": "0000415723SCHMR2", + "StationName": "lc3t3", + "BodyPartExamined": "CSPINE", + "PatientPosition": "HFS", + "SoftwareVersions": "27_LX_MR_Software_release:DV26.0_R01_1725.a", + "MRAcquisitionType": "3D", + "SeriesDescription": "T2w", + "ProtocolName": "T2w", + "ScanningSequence": "SE", + "SequenceVariant": "SK_OSP", + "ScanOptions": "FC_FREQ_AX_GEMS_FC_NPW_EDR_GEMS_FILTERED_GEMS_ACC_GEMS", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "OTHER" + ], + "SeriesNumber": 5, + "AcquisitionTime": "13:41:23.000000", + "AcquisitionNumber": 1, + "SliceThickness": 0.8, + "SpacingBetweenSlices": 0.8, + "SAR": 0.4405, + "EchoTime": 0.134986, + "RepetitionTime": 2.502, + "FlipAngle": 90, + "PercentPhaseFOV": 100, + "EchoTrainLength": 78, + "AcquisitionMatrixPE": 320, + "ReconMatrixPE": 320, + "PixelBandwidth": 520.812, + "ImageOrientationPatientDICOM": [ + 0, + 1, + 0, + -0.02962, + 0, + -0.99956 + ], + "InPlanePhaseEncodingDirectionDICOM": "ROW", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20171215 (OpenJPEG build) GCC7.3.0", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-stanford04/anat/sub-stanford04_flip-1_mt-on_space-other_MTS.json b/derivatives/data_preprocessed/sub-stanford04/anat/sub-stanford04_flip-1_mt-on_space-other_MTS.json index 623cfa2ccc..1682e31435 100644 --- a/derivatives/data_preprocessed/sub-stanford04/anat/sub-stanford04_flip-1_mt-on_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-stanford04/anat/sub-stanford04_flip-1_mt-on_space-other_MTS.json @@ -1,42 +1,50 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "GE", - "ManufacturersModelName": "DISCOVERY_MR750", - "InstitutionName": "Stanford_Lucas_Center", - "DeviceSerialNumber": "0000415723SCHMR2", - "StationName": "lc3t3", - "BodyPartExamined": "NECK", - "PatientPosition": "HFS", - "SoftwareVersions": "27_LX_MR_Software_release:DV26.0_R01_1725.a", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-MT1", - "ProtocolName": "GRE-MT1", - "ScanningSequence": "GR", - "SequenceVariant": "SS_SP", - "ScanOptions": "EDR_GEMS_MT_GEMS_FILTERED_GEMS_PFF", - "ImageType": ["ORIGINAL", "PRIMARY", "OTHER"], - "SeriesNumber": 7, - "AcquisitionTime": "17:12:54.000000", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SpacingBetweenSlices": 5, - "SAR": 0.628008, - "EchoTime": 0.004, - "RepetitionTime": 0.108, - "FlipAngle": 9, - "PercentPhaseFOV": 100, - "AcquisitionMatrixPE": 192, - "ReconMatrixPE": 192, - "PixelBandwidth": 434.062, - "ImageOrientationPatientDICOM": [ - 1, - -0, - 0, - -0, - 0.99763, - 0.06875 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20171215 (OpenJPEG build) GCC7.3.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "GE", + "ManufacturersModelName": "DISCOVERY_MR750", + "InstitutionName": "Stanford_Lucas_Center", + "DeviceSerialNumber": "0000415723SCHMR2", + "StationName": "lc3t3", + "BodyPartExamined": "NECK", + "PatientPosition": "HFS", + "SoftwareVersions": "27_LX_MR_Software_release:DV26.0_R01_1725.a", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-MT1", + "ProtocolName": "GRE-MT1", + "ScanningSequence": "GR", + "SequenceVariant": "SS_SP", + "ScanOptions": "EDR_GEMS_MT_GEMS_FILTERED_GEMS_PFF", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "OTHER" + ], + "SeriesNumber": 7, + "AcquisitionTime": "17:12:54.000000", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SpacingBetweenSlices": 5, + "SAR": 0.628008, + "EchoTime": 0.004, + "RepetitionTime": 0.108, + "FlipAngle": 9, + "PercentPhaseFOV": 100, + "AcquisitionMatrixPE": 192, + "ReconMatrixPE": 192, + "PixelBandwidth": 434.062, + "ImageOrientationPatientDICOM": [ + 1, + 0, + 0, + 0, + 0.99763, + 0.06875 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20171215 (OpenJPEG build) GCC7.3.0", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-stanford04/anat/sub-stanford04_flip-2_mt-off_space-other_MTS.json b/derivatives/data_preprocessed/sub-stanford04/anat/sub-stanford04_flip-2_mt-off_space-other_MTS.json index 6c9c37b63e..298742bf66 100644 --- a/derivatives/data_preprocessed/sub-stanford04/anat/sub-stanford04_flip-2_mt-off_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-stanford04/anat/sub-stanford04_flip-2_mt-off_space-other_MTS.json @@ -1,42 +1,50 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "GE", - "ManufacturersModelName": "DISCOVERY_MR750", - "InstitutionName": "Stanford_Lucas_Center", - "DeviceSerialNumber": "0000415723SCHMR2", - "StationName": "lc3t3", - "BodyPartExamined": "NECK", - "PatientPosition": "HFS", - "SoftwareVersions": "27_LX_MR_Software_release:DV26.0_R01_1725.a", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-T1w", - "ProtocolName": "GRE-T1w", - "ScanningSequence": "GR", - "SequenceVariant": "SS_SP", - "ScanOptions": "EDR_GEMS_FILTERED_GEMS_PFF", - "ImageType": ["ORIGINAL", "PRIMARY", "OTHER"], - "SeriesNumber": 8, - "AcquisitionTime": "17:24:58.000000", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SpacingBetweenSlices": 5, - "SAR": 0.0309639, - "EchoTime": 0.004, - "RepetitionTime": 0.015, - "FlipAngle": 15, - "PercentPhaseFOV": 100, - "AcquisitionMatrixPE": 192, - "ReconMatrixPE": 192, - "PixelBandwidth": 434.062, - "ImageOrientationPatientDICOM": [ - 1, - -0, - 0, - -0, - 0.99763, - 0.06875 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20171215 (OpenJPEG build) GCC7.3.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "GE", + "ManufacturersModelName": "DISCOVERY_MR750", + "InstitutionName": "Stanford_Lucas_Center", + "DeviceSerialNumber": "0000415723SCHMR2", + "StationName": "lc3t3", + "BodyPartExamined": "NECK", + "PatientPosition": "HFS", + "SoftwareVersions": "27_LX_MR_Software_release:DV26.0_R01_1725.a", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-T1w", + "ProtocolName": "GRE-T1w", + "ScanningSequence": "GR", + "SequenceVariant": "SS_SP", + "ScanOptions": "EDR_GEMS_FILTERED_GEMS_PFF", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "OTHER" + ], + "SeriesNumber": 8, + "AcquisitionTime": "17:24:58.000000", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SpacingBetweenSlices": 5, + "SAR": 0.0309639, + "EchoTime": 0.004, + "RepetitionTime": 0.015, + "FlipAngle": 15, + "PercentPhaseFOV": 100, + "AcquisitionMatrixPE": 192, + "ReconMatrixPE": 192, + "PixelBandwidth": 434.062, + "ImageOrientationPatientDICOM": [ + 1, + 0, + 0, + 0, + 0.99763, + 0.06875 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20171215 (OpenJPEG build) GCC7.3.0", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-stanford04/anat/sub-stanford04_space-other_T1w.json b/derivatives/data_preprocessed/sub-stanford04/anat/sub-stanford04_space-other_T1w.json index 2f28f61361..9b3b7378d1 100644 --- a/derivatives/data_preprocessed/sub-stanford04/anat/sub-stanford04_space-other_T1w.json +++ b/derivatives/data_preprocessed/sub-stanford04/anat/sub-stanford04_space-other_T1w.json @@ -1,43 +1,52 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "GE", - "ManufacturersModelName": "DISCOVERY_MR750", - "InstitutionName": "Stanford_Lucas_Center", - "DeviceSerialNumber": "0000415723SCHMR2", - "StationName": "lc3t3", - "BodyPartExamined": "HEAD", - "PatientPosition": "HFS", - "SoftwareVersions": "27_LX_MR_Software_release:DV26.0_R01_1725.a", - "MRAcquisitionType": "3D", - "SeriesDescription": "T1w", - "ProtocolName": "T1w", - "ScanningSequence": "GR", - "SequenceVariant": "SS_SP_SK", - "ScanOptions": "FAST_GEMS_EDR_GEMS_FILTERED_GEMS_ACC_GEMS_PFF_IR_GEMS", - "ImageType": ["ORIGINAL", "PRIMARY", "OTHER"], - "SeriesNumber": 4, - "AcquisitionTime": "16:54:28.000000", - "AcquisitionNumber": 1, - "SliceThickness": 1, - "SpacingBetweenSlices": 1, - "SAR": 0.152142, - "EchoTime": 0.00128, - "RepetitionTime": 0.003548, - "InversionTime": 1, - "FlipAngle": 9, - "PercentPhaseFOV": 80, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 320, - "PixelBandwidth": 892.875, - "ImageOrientationPatientDICOM": [ - -0, - 1, - 0, - -0.04726, - -0, - -0.99888 ], - "InPlanePhaseEncodingDirectionDICOM": "ROW", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20171215 (OpenJPEG build) GCC7.3.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "GE", + "ManufacturersModelName": "DISCOVERY_MR750", + "InstitutionName": "Stanford_Lucas_Center", + "DeviceSerialNumber": "0000415723SCHMR2", + "StationName": "lc3t3", + "BodyPartExamined": "HEAD", + "PatientPosition": "HFS", + "SoftwareVersions": "27_LX_MR_Software_release:DV26.0_R01_1725.a", + "MRAcquisitionType": "3D", + "SeriesDescription": "T1w", + "ProtocolName": "T1w", + "ScanningSequence": "GR", + "SequenceVariant": "SS_SP_SK", + "ScanOptions": "FAST_GEMS_EDR_GEMS_FILTERED_GEMS_ACC_GEMS_PFF_IR_GEMS", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "OTHER" + ], + "SeriesNumber": 4, + "AcquisitionTime": "16:54:28.000000", + "AcquisitionNumber": 1, + "SliceThickness": 1, + "SpacingBetweenSlices": 1, + "SAR": 0.152142, + "EchoTime": 0.00128, + "RepetitionTime": 0.003548, + "InversionTime": 1, + "FlipAngle": 9, + "PercentPhaseFOV": 80, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 320, + "PixelBandwidth": 892.875, + "ImageOrientationPatientDICOM": [ + 0, + 1, + 0, + -0.04726, + 0, + -0.99888 + ], + "InPlanePhaseEncodingDirectionDICOM": "ROW", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20171215 (OpenJPEG build) GCC7.3.0", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-stanford04/anat/sub-stanford04_space-other_T2star.json b/derivatives/data_preprocessed/sub-stanford04/anat/sub-stanford04_space-other_T2star.json index da752d135a..b89072d26f 100644 --- a/derivatives/data_preprocessed/sub-stanford04/anat/sub-stanford04_space-other_T2star.json +++ b/derivatives/data_preprocessed/sub-stanford04/anat/sub-stanford04_space-other_T2star.json @@ -45,5 +45,9 @@ "InPlanePhaseEncodingDirectionDICOM": "COL", "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20171215 (OpenJPEG build) GCC7.3.0", - "AcquisitionDuration": 288.0 + "AcquisitionDuration": 288.0, + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-stanford04/anat/sub-stanford04_space-other_T2w.json b/derivatives/data_preprocessed/sub-stanford04/anat/sub-stanford04_space-other_T2w.json index adbda880d3..cf9c33f261 100644 --- a/derivatives/data_preprocessed/sub-stanford04/anat/sub-stanford04_space-other_T2w.json +++ b/derivatives/data_preprocessed/sub-stanford04/anat/sub-stanford04_space-other_T2w.json @@ -1,43 +1,52 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "GE", - "ManufacturersModelName": "DISCOVERY_MR750", - "InstitutionName": "Stanford_Lucas_Center", - "DeviceSerialNumber": "0000415723SCHMR2", - "StationName": "lc3t3", - "BodyPartExamined": "CSPINE", - "PatientPosition": "HFS", - "SoftwareVersions": "27_LX_MR_Software_release:DV26.0_R01_1725.a", - "MRAcquisitionType": "3D", - "SeriesDescription": "ORIG_T2w", - "ProtocolName": "ORIG_T2w", - "ScanningSequence": "SE", - "SequenceVariant": "SK_OSP", - "ScanOptions": "FC_FREQ_AX_GEMS_FC_NPW_EDR_GEMS_ACC_GEMS", - "ImageType": ["ORIGINAL", "PRIMARY", "OTHER"], - "SeriesNumber": 40005, - "AcquisitionTime": "17:00:38.000000", - "AcquisitionNumber": 1, - "SliceThickness": 0.8, - "SpacingBetweenSlices": 0.8, - "SAR": 0.5024, - "EchoTime": 0.134996, - "RepetitionTime": 2.502, - "FlipAngle": 90, - "PercentPhaseFOV": 100, - "EchoTrainLength": 78, - "AcquisitionMatrixPE": 320, - "ReconMatrixPE": 320, - "PixelBandwidth": 520.812, - "ImageOrientationPatientDICOM": [ - -0, - 1, - 0, - -0.03042, - -0, - -0.99954 ], - "InPlanePhaseEncodingDirectionDICOM": "ROW", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20171215 (OpenJPEG build) GCC7.3.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "GE", + "ManufacturersModelName": "DISCOVERY_MR750", + "InstitutionName": "Stanford_Lucas_Center", + "DeviceSerialNumber": "0000415723SCHMR2", + "StationName": "lc3t3", + "BodyPartExamined": "CSPINE", + "PatientPosition": "HFS", + "SoftwareVersions": "27_LX_MR_Software_release:DV26.0_R01_1725.a", + "MRAcquisitionType": "3D", + "SeriesDescription": "ORIG_T2w", + "ProtocolName": "ORIG_T2w", + "ScanningSequence": "SE", + "SequenceVariant": "SK_OSP", + "ScanOptions": "FC_FREQ_AX_GEMS_FC_NPW_EDR_GEMS_ACC_GEMS", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "OTHER" + ], + "SeriesNumber": 40005, + "AcquisitionTime": "17:00:38.000000", + "AcquisitionNumber": 1, + "SliceThickness": 0.8, + "SpacingBetweenSlices": 0.8, + "SAR": 0.5024, + "EchoTime": 0.134996, + "RepetitionTime": 2.502, + "FlipAngle": 90, + "PercentPhaseFOV": 100, + "EchoTrainLength": 78, + "AcquisitionMatrixPE": 320, + "ReconMatrixPE": 320, + "PixelBandwidth": 520.812, + "ImageOrientationPatientDICOM": [ + 0, + 1, + 0, + -0.03042, + 0, + -0.99954 + ], + "InPlanePhaseEncodingDirectionDICOM": "ROW", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20171215 (OpenJPEG build) GCC7.3.0", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-stanford05/anat/sub-stanford05_flip-1_mt-on_space-other_MTS.json b/derivatives/data_preprocessed/sub-stanford05/anat/sub-stanford05_flip-1_mt-on_space-other_MTS.json index 933410c35d..8559e13d32 100644 --- a/derivatives/data_preprocessed/sub-stanford05/anat/sub-stanford05_flip-1_mt-on_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-stanford05/anat/sub-stanford05_flip-1_mt-on_space-other_MTS.json @@ -1,42 +1,50 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "GE", - "ManufacturersModelName": "DISCOVERY_MR750", - "InstitutionName": "Stanford_Lucas_Center", - "DeviceSerialNumber": "0000415723SCHMR2", - "StationName": "lc3t3", - "BodyPartExamined": "NECK", - "PatientPosition": "HFS", - "SoftwareVersions": "27_LX_MR_Software_release:DV26.0_R01_1725.a", - "MRAcquisitionType": "3D", - "SeriesDescription": "ORIG_GRE-MT1", - "ProtocolName": "ORIG_GRE-MT1", - "ScanningSequence": "GR", - "SequenceVariant": "SS_SP", - "ScanOptions": "EDR_GEMS_MT_GEMS_PFF", - "ImageType": ["ORIGINAL", "PRIMARY", "OTHER"], - "SeriesNumber": 40007, - "AcquisitionTime": "18:42:20.000000", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SpacingBetweenSlices": 5, - "SAR": 0.579508, - "EchoTime": 0.004, - "RepetitionTime": 0.108, - "FlipAngle": 9, - "PercentPhaseFOV": 100, - "AcquisitionMatrixPE": 192, - "ReconMatrixPE": 192, - "PixelBandwidth": 434.062, - "ImageOrientationPatientDICOM": [ - 0.99902, - -0, - 0.04432, - -0.00631, - 0.9898, - 0.14231 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20171215 (OpenJPEG build) GCC7.3.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "GE", + "ManufacturersModelName": "DISCOVERY_MR750", + "InstitutionName": "Stanford_Lucas_Center", + "DeviceSerialNumber": "0000415723SCHMR2", + "StationName": "lc3t3", + "BodyPartExamined": "NECK", + "PatientPosition": "HFS", + "SoftwareVersions": "27_LX_MR_Software_release:DV26.0_R01_1725.a", + "MRAcquisitionType": "3D", + "SeriesDescription": "ORIG_GRE-MT1", + "ProtocolName": "ORIG_GRE-MT1", + "ScanningSequence": "GR", + "SequenceVariant": "SS_SP", + "ScanOptions": "EDR_GEMS_MT_GEMS_PFF", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "OTHER" + ], + "SeriesNumber": 40007, + "AcquisitionTime": "18:42:20.000000", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SpacingBetweenSlices": 5, + "SAR": 0.579508, + "EchoTime": 0.004, + "RepetitionTime": 0.108, + "FlipAngle": 9, + "PercentPhaseFOV": 100, + "AcquisitionMatrixPE": 192, + "ReconMatrixPE": 192, + "PixelBandwidth": 434.062, + "ImageOrientationPatientDICOM": [ + 0.99902, + 0, + 0.04432, + -0.00631, + 0.9898, + 0.14231 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20171215 (OpenJPEG build) GCC7.3.0", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-stanford05/anat/sub-stanford05_flip-2_mt-off_space-other_MTS.json b/derivatives/data_preprocessed/sub-stanford05/anat/sub-stanford05_flip-2_mt-off_space-other_MTS.json index e633d758db..fbc0e476f3 100644 --- a/derivatives/data_preprocessed/sub-stanford05/anat/sub-stanford05_flip-2_mt-off_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-stanford05/anat/sub-stanford05_flip-2_mt-off_space-other_MTS.json @@ -1,42 +1,50 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "GE", - "ManufacturersModelName": "DISCOVERY_MR750", - "InstitutionName": "Stanford_Lucas_Center", - "DeviceSerialNumber": "0000415723SCHMR2", - "StationName": "lc3t3", - "BodyPartExamined": "NECK", - "PatientPosition": "HFS", - "SoftwareVersions": "27_LX_MR_Software_release:DV26.0_R01_1725.a", - "MRAcquisitionType": "3D", - "SeriesDescription": "ORIG_GRE-T1w", - "ProtocolName": "ORIG_GRE-T1w", - "ScanningSequence": "GR", - "SequenceVariant": "SS_SP", - "ScanOptions": "EDR_GEMS_PFF", - "ImageType": ["ORIGINAL", "PRIMARY", "OTHER"], - "SeriesNumber": 40009, - "AcquisitionTime": "19:06:18.000000", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SpacingBetweenSlices": 5, - "SAR": 0.0285727, - "EchoTime": 0.004, - "RepetitionTime": 0.015, - "FlipAngle": 15, - "PercentPhaseFOV": 100, - "AcquisitionMatrixPE": 192, - "ReconMatrixPE": 192, - "PixelBandwidth": 434.062, - "ImageOrientationPatientDICOM": [ - 0.99902, - -0, - 0.04432, - -0.00631, - 0.9898, - 0.14231 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20171215 (OpenJPEG build) GCC7.3.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "GE", + "ManufacturersModelName": "DISCOVERY_MR750", + "InstitutionName": "Stanford_Lucas_Center", + "DeviceSerialNumber": "0000415723SCHMR2", + "StationName": "lc3t3", + "BodyPartExamined": "NECK", + "PatientPosition": "HFS", + "SoftwareVersions": "27_LX_MR_Software_release:DV26.0_R01_1725.a", + "MRAcquisitionType": "3D", + "SeriesDescription": "ORIG_GRE-T1w", + "ProtocolName": "ORIG_GRE-T1w", + "ScanningSequence": "GR", + "SequenceVariant": "SS_SP", + "ScanOptions": "EDR_GEMS_PFF", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "OTHER" + ], + "SeriesNumber": 40009, + "AcquisitionTime": "19:06:18.000000", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SpacingBetweenSlices": 5, + "SAR": 0.0285727, + "EchoTime": 0.004, + "RepetitionTime": 0.015, + "FlipAngle": 15, + "PercentPhaseFOV": 100, + "AcquisitionMatrixPE": 192, + "ReconMatrixPE": 192, + "PixelBandwidth": 434.062, + "ImageOrientationPatientDICOM": [ + 0.99902, + 0, + 0.04432, + -0.00631, + 0.9898, + 0.14231 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20171215 (OpenJPEG build) GCC7.3.0", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-stanford05/anat/sub-stanford05_space-other_T1w.json b/derivatives/data_preprocessed/sub-stanford05/anat/sub-stanford05_space-other_T1w.json index 42cfccc64f..ec2cda2f04 100644 --- a/derivatives/data_preprocessed/sub-stanford05/anat/sub-stanford05_space-other_T1w.json +++ b/derivatives/data_preprocessed/sub-stanford05/anat/sub-stanford05_space-other_T1w.json @@ -1,43 +1,52 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "GE", - "ManufacturersModelName": "DISCOVERY_MR750", - "InstitutionName": "Stanford_Lucas_Center", - "DeviceSerialNumber": "0000415723SCHMR2", - "StationName": "lc3t3", - "BodyPartExamined": "HEAD", - "PatientPosition": "HFS", - "SoftwareVersions": "27_LX_MR_Software_release:DV26.0_R01_1725.a", - "MRAcquisitionType": "3D", - "SeriesDescription": "T1w", - "ProtocolName": "T1w", - "ScanningSequence": "GR", - "SequenceVariant": "SS_SP_SK", - "ScanOptions": "FAST_GEMS_EDR_GEMS_FILTERED_GEMS_ACC_GEMS_PFF_IR_GEMS", - "ImageType": ["ORIGINAL", "PRIMARY", "OTHER"], - "SeriesNumber": 4, - "AcquisitionTime": "18:22:58.000000", - "AcquisitionNumber": 1, - "SliceThickness": 1, - "SpacingBetweenSlices": 1, - "SAR": 0.155747, - "EchoTime": 0.001276, - "RepetitionTime": 0.003544, - "InversionTime": 1, - "FlipAngle": 9, - "PercentPhaseFOV": 80, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 320, - "PixelBandwidth": 892.875, - "ImageOrientationPatientDICOM": [ - -0, - 1, - 0, - 0.03457, - -0, - -0.9994 ], - "InPlanePhaseEncodingDirectionDICOM": "ROW", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20171215 (OpenJPEG build) GCC7.3.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "GE", + "ManufacturersModelName": "DISCOVERY_MR750", + "InstitutionName": "Stanford_Lucas_Center", + "DeviceSerialNumber": "0000415723SCHMR2", + "StationName": "lc3t3", + "BodyPartExamined": "HEAD", + "PatientPosition": "HFS", + "SoftwareVersions": "27_LX_MR_Software_release:DV26.0_R01_1725.a", + "MRAcquisitionType": "3D", + "SeriesDescription": "T1w", + "ProtocolName": "T1w", + "ScanningSequence": "GR", + "SequenceVariant": "SS_SP_SK", + "ScanOptions": "FAST_GEMS_EDR_GEMS_FILTERED_GEMS_ACC_GEMS_PFF_IR_GEMS", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "OTHER" + ], + "SeriesNumber": 4, + "AcquisitionTime": "18:22:58.000000", + "AcquisitionNumber": 1, + "SliceThickness": 1, + "SpacingBetweenSlices": 1, + "SAR": 0.155747, + "EchoTime": 0.001276, + "RepetitionTime": 0.003544, + "InversionTime": 1, + "FlipAngle": 9, + "PercentPhaseFOV": 80, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 320, + "PixelBandwidth": 892.875, + "ImageOrientationPatientDICOM": [ + 0, + 1, + 0, + 0.03457, + 0, + -0.9994 + ], + "InPlanePhaseEncodingDirectionDICOM": "ROW", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20171215 (OpenJPEG build) GCC7.3.0", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-stanford05/anat/sub-stanford05_space-other_T2star.json b/derivatives/data_preprocessed/sub-stanford05/anat/sub-stanford05_space-other_T2star.json index 5d25cefe15..708544b725 100644 --- a/derivatives/data_preprocessed/sub-stanford05/anat/sub-stanford05_space-other_T2star.json +++ b/derivatives/data_preprocessed/sub-stanford05/anat/sub-stanford05_space-other_T2star.json @@ -45,5 +45,9 @@ "InPlanePhaseEncodingDirectionDICOM": "COL", "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20171215 (OpenJPEG build) GCC7.3.0", - "AcquisitionDuration": 288.0 + "AcquisitionDuration": 288.0, + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-stanford05/anat/sub-stanford05_space-other_T2w.json b/derivatives/data_preprocessed/sub-stanford05/anat/sub-stanford05_space-other_T2w.json index e70dc55b74..c1f90e46af 100644 --- a/derivatives/data_preprocessed/sub-stanford05/anat/sub-stanford05_space-other_T2w.json +++ b/derivatives/data_preprocessed/sub-stanford05/anat/sub-stanford05_space-other_T2w.json @@ -1,43 +1,52 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "GE", - "ManufacturersModelName": "DISCOVERY_MR750", - "InstitutionName": "Stanford_Lucas_Center", - "DeviceSerialNumber": "0000415723SCHMR2", - "StationName": "lc3t3", - "BodyPartExamined": "CSPINE", - "PatientPosition": "HFS", - "SoftwareVersions": "27_LX_MR_Software_release:DV26.0_R01_1725.a", - "MRAcquisitionType": "3D", - "SeriesDescription": "T2w", - "ProtocolName": "T2w", - "ScanningSequence": "SE", - "SequenceVariant": "SK_OSP", - "ScanOptions": "FC_FREQ_AX_GEMS_FC_NPW_EDR_GEMS_FILTERED_GEMS_ACC_GEMS", - "ImageType": ["ORIGINAL", "PRIMARY", "OTHER"], - "SeriesNumber": 11, - "AcquisitionTime": "19:15:37.000000", - "AcquisitionNumber": 1, - "SliceThickness": 0.8, - "SpacingBetweenSlices": 0.8, - "SAR": 0.4514, - "EchoTime": 0.136337, - "RepetitionTime": 2.502, - "FlipAngle": 90, - "PercentPhaseFOV": 100, - "EchoTrainLength": 78, - "AcquisitionMatrixPE": 320, - "ReconMatrixPE": 320, - "PixelBandwidth": 520.812, - "ImageOrientationPatientDICOM": [ - -0, - 1, - 0, - 0.02896, - -0, - -0.99958 ], - "InPlanePhaseEncodingDirectionDICOM": "ROW", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20171215 (OpenJPEG build) GCC7.3.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "GE", + "ManufacturersModelName": "DISCOVERY_MR750", + "InstitutionName": "Stanford_Lucas_Center", + "DeviceSerialNumber": "0000415723SCHMR2", + "StationName": "lc3t3", + "BodyPartExamined": "CSPINE", + "PatientPosition": "HFS", + "SoftwareVersions": "27_LX_MR_Software_release:DV26.0_R01_1725.a", + "MRAcquisitionType": "3D", + "SeriesDescription": "T2w", + "ProtocolName": "T2w", + "ScanningSequence": "SE", + "SequenceVariant": "SK_OSP", + "ScanOptions": "FC_FREQ_AX_GEMS_FC_NPW_EDR_GEMS_FILTERED_GEMS_ACC_GEMS", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "OTHER" + ], + "SeriesNumber": 11, + "AcquisitionTime": "19:15:37.000000", + "AcquisitionNumber": 1, + "SliceThickness": 0.8, + "SpacingBetweenSlices": 0.8, + "SAR": 0.4514, + "EchoTime": 0.136337, + "RepetitionTime": 2.502, + "FlipAngle": 90, + "PercentPhaseFOV": 100, + "EchoTrainLength": 78, + "AcquisitionMatrixPE": 320, + "ReconMatrixPE": 320, + "PixelBandwidth": 520.812, + "ImageOrientationPatientDICOM": [ + 0, + 1, + 0, + 0.02896, + 0, + -0.99958 + ], + "InPlanePhaseEncodingDirectionDICOM": "ROW", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20171215 (OpenJPEG build) GCC7.3.0", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-stanford06/anat/sub-stanford06_flip-1_mt-on_space-other_MTS.json b/derivatives/data_preprocessed/sub-stanford06/anat/sub-stanford06_flip-1_mt-on_space-other_MTS.json index a6d514bdcd..218e0ac936 100644 --- a/derivatives/data_preprocessed/sub-stanford06/anat/sub-stanford06_flip-1_mt-on_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-stanford06/anat/sub-stanford06_flip-1_mt-on_space-other_MTS.json @@ -1,42 +1,50 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "GE", - "ManufacturersModelName": "DISCOVERY_MR750", - "InstitutionName": "Stanford_Lucas_Center", - "DeviceSerialNumber": "0000415723SCHMR2", - "StationName": "lc3t3", - "BodyPartExamined": "NECK", - "PatientPosition": "HFS", - "SoftwareVersions": "27_LX_MR_Software_release:DV26.0_R01_1725.a", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-MT1", - "ProtocolName": "GRE-MT1", - "ScanningSequence": "GR", - "SequenceVariant": "SS_SP", - "ScanOptions": "EDR_GEMS_MT_GEMS_FILTERED_GEMS_PFF", - "ImageType": ["ORIGINAL", "PRIMARY", "OTHER"], - "SeriesNumber": 7, - "AcquisitionTime": "18:26:13.000000", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SpacingBetweenSlices": 5, - "SAR": 1.27419, - "EchoTime": 0.004, - "RepetitionTime": 0.108, - "FlipAngle": 9, - "PercentPhaseFOV": 100, - "AcquisitionMatrixPE": 192, - "ReconMatrixPE": 192, - "PixelBandwidth": 434.062, - "ImageOrientationPatientDICOM": [ - 1, - -0, - 0, - -0, - 0.99985, - -0.01711 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20171215 (OpenJPEG build) GCC7.3.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "GE", + "ManufacturersModelName": "DISCOVERY_MR750", + "InstitutionName": "Stanford_Lucas_Center", + "DeviceSerialNumber": "0000415723SCHMR2", + "StationName": "lc3t3", + "BodyPartExamined": "NECK", + "PatientPosition": "HFS", + "SoftwareVersions": "27_LX_MR_Software_release:DV26.0_R01_1725.a", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-MT1", + "ProtocolName": "GRE-MT1", + "ScanningSequence": "GR", + "SequenceVariant": "SS_SP", + "ScanOptions": "EDR_GEMS_MT_GEMS_FILTERED_GEMS_PFF", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "OTHER" + ], + "SeriesNumber": 7, + "AcquisitionTime": "18:26:13.000000", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SpacingBetweenSlices": 5, + "SAR": 1.27419, + "EchoTime": 0.004, + "RepetitionTime": 0.108, + "FlipAngle": 9, + "PercentPhaseFOV": 100, + "AcquisitionMatrixPE": 192, + "ReconMatrixPE": 192, + "PixelBandwidth": 434.062, + "ImageOrientationPatientDICOM": [ + 1, + 0, + 0, + 0, + 0.99985, + -0.01711 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20171215 (OpenJPEG build) GCC7.3.0", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-stanford06/anat/sub-stanford06_flip-2_mt-off_space-other_MTS.json b/derivatives/data_preprocessed/sub-stanford06/anat/sub-stanford06_flip-2_mt-off_space-other_MTS.json index ad3a8cdf54..c19608085a 100644 --- a/derivatives/data_preprocessed/sub-stanford06/anat/sub-stanford06_flip-2_mt-off_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-stanford06/anat/sub-stanford06_flip-2_mt-off_space-other_MTS.json @@ -1,42 +1,50 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "GE", - "ManufacturersModelName": "DISCOVERY_MR750", - "InstitutionName": "Stanford_Lucas_Center", - "DeviceSerialNumber": "0000415723SCHMR2", - "StationName": "lc3t3", - "BodyPartExamined": "NECK", - "PatientPosition": "HFS", - "SoftwareVersions": "27_LX_MR_Software_release:DV26.0_R01_1725.a", - "MRAcquisitionType": "3D", - "SeriesDescription": "ORIG_GRE-T1w", - "ProtocolName": "ORIG_GRE-T1w", - "ScanningSequence": "GR", - "SequenceVariant": "SS_SP", - "ScanOptions": "EDR_GEMS_PFF", - "ImageType": ["ORIGINAL", "PRIMARY", "OTHER"], - "SeriesNumber": 40009, - "AcquisitionTime": "18:49:39.000000", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SpacingBetweenSlices": 5, - "SAR": 0.0628237, - "EchoTime": 0.004, - "RepetitionTime": 0.015, - "FlipAngle": 15, - "PercentPhaseFOV": 100, - "AcquisitionMatrixPE": 192, - "ReconMatrixPE": 192, - "PixelBandwidth": 434.062, - "ImageOrientationPatientDICOM": [ - 1, - -0, - 0, - -0, - 0.99985, - -0.01711 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20171215 (OpenJPEG build) GCC7.3.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "GE", + "ManufacturersModelName": "DISCOVERY_MR750", + "InstitutionName": "Stanford_Lucas_Center", + "DeviceSerialNumber": "0000415723SCHMR2", + "StationName": "lc3t3", + "BodyPartExamined": "NECK", + "PatientPosition": "HFS", + "SoftwareVersions": "27_LX_MR_Software_release:DV26.0_R01_1725.a", + "MRAcquisitionType": "3D", + "SeriesDescription": "ORIG_GRE-T1w", + "ProtocolName": "ORIG_GRE-T1w", + "ScanningSequence": "GR", + "SequenceVariant": "SS_SP", + "ScanOptions": "EDR_GEMS_PFF", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "OTHER" + ], + "SeriesNumber": 40009, + "AcquisitionTime": "18:49:39.000000", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SpacingBetweenSlices": 5, + "SAR": 0.0628237, + "EchoTime": 0.004, + "RepetitionTime": 0.015, + "FlipAngle": 15, + "PercentPhaseFOV": 100, + "AcquisitionMatrixPE": 192, + "ReconMatrixPE": 192, + "PixelBandwidth": 434.062, + "ImageOrientationPatientDICOM": [ + 1, + 0, + 0, + 0, + 0.99985, + -0.01711 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20171215 (OpenJPEG build) GCC7.3.0", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-stanford06/anat/sub-stanford06_space-other_T1w.json b/derivatives/data_preprocessed/sub-stanford06/anat/sub-stanford06_space-other_T1w.json index ccbc482740..aedf03ad1c 100644 --- a/derivatives/data_preprocessed/sub-stanford06/anat/sub-stanford06_space-other_T1w.json +++ b/derivatives/data_preprocessed/sub-stanford06/anat/sub-stanford06_space-other_T1w.json @@ -1,43 +1,52 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "GE", - "ManufacturersModelName": "DISCOVERY_MR750", - "InstitutionName": "Stanford_Lucas_Center", - "DeviceSerialNumber": "0000415723SCHMR2", - "StationName": "lc3t3", - "BodyPartExamined": "HEAD", - "PatientPosition": "HFS", - "SoftwareVersions": "27_LX_MR_Software_release:DV26.0_R01_1725.a", - "MRAcquisitionType": "3D", - "SeriesDescription": "ORIG_T1w", - "ProtocolName": "ORIG_T1w", - "ScanningSequence": "GR", - "SequenceVariant": "SS_SP_SK", - "ScanOptions": "FAST_GEMS_EDR_GEMS_ACC_GEMS_PFF_IR_GEMS", - "ImageType": ["ORIGINAL", "PRIMARY", "OTHER"], - "SeriesNumber": 40004, - "AcquisitionTime": "18:09:59.000000", - "AcquisitionNumber": 1, - "SliceThickness": 1, - "SpacingBetweenSlices": 1, - "SAR": 0.398167, - "EchoTime": 0.001276, - "RepetitionTime": 0.003532, - "InversionTime": 1, - "FlipAngle": 9, - "PercentPhaseFOV": 80, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 320, - "PixelBandwidth": 892.875, - "ImageOrientationPatientDICOM": [ - -0, - 1, - 0, - -0, - -0, - -1 ], - "InPlanePhaseEncodingDirectionDICOM": "ROW", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20171215 (OpenJPEG build) GCC7.3.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "GE", + "ManufacturersModelName": "DISCOVERY_MR750", + "InstitutionName": "Stanford_Lucas_Center", + "DeviceSerialNumber": "0000415723SCHMR2", + "StationName": "lc3t3", + "BodyPartExamined": "HEAD", + "PatientPosition": "HFS", + "SoftwareVersions": "27_LX_MR_Software_release:DV26.0_R01_1725.a", + "MRAcquisitionType": "3D", + "SeriesDescription": "ORIG_T1w", + "ProtocolName": "ORIG_T1w", + "ScanningSequence": "GR", + "SequenceVariant": "SS_SP_SK", + "ScanOptions": "FAST_GEMS_EDR_GEMS_ACC_GEMS_PFF_IR_GEMS", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "OTHER" + ], + "SeriesNumber": 40004, + "AcquisitionTime": "18:09:59.000000", + "AcquisitionNumber": 1, + "SliceThickness": 1, + "SpacingBetweenSlices": 1, + "SAR": 0.398167, + "EchoTime": 0.001276, + "RepetitionTime": 0.003532, + "InversionTime": 1, + "FlipAngle": 9, + "PercentPhaseFOV": 80, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 320, + "PixelBandwidth": 892.875, + "ImageOrientationPatientDICOM": [ + 0, + 1, + 0, + 0, + 0, + -1 + ], + "InPlanePhaseEncodingDirectionDICOM": "ROW", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20171215 (OpenJPEG build) GCC7.3.0", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-stanford06/anat/sub-stanford06_space-other_T2star.json b/derivatives/data_preprocessed/sub-stanford06/anat/sub-stanford06_space-other_T2star.json index 324325ae62..d43d4e4ad6 100644 --- a/derivatives/data_preprocessed/sub-stanford06/anat/sub-stanford06_space-other_T2star.json +++ b/derivatives/data_preprocessed/sub-stanford06/anat/sub-stanford06_space-other_T2star.json @@ -45,5 +45,9 @@ "InPlanePhaseEncodingDirectionDICOM": "COL", "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20171215 (OpenJPEG build) GCC7.3.0", - "AcquisitionDuration": 288.0 + "AcquisitionDuration": 288.0, + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-stanford06/anat/sub-stanford06_space-other_T2w.json b/derivatives/data_preprocessed/sub-stanford06/anat/sub-stanford06_space-other_T2w.json index fae17f092a..4d4716b782 100644 --- a/derivatives/data_preprocessed/sub-stanford06/anat/sub-stanford06_space-other_T2w.json +++ b/derivatives/data_preprocessed/sub-stanford06/anat/sub-stanford06_space-other_T2w.json @@ -1,43 +1,52 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "GE", - "ManufacturersModelName": "DISCOVERY_MR750", - "InstitutionName": "Stanford_Lucas_Center", - "DeviceSerialNumber": "0000415723SCHMR2", - "StationName": "lc3t3", - "BodyPartExamined": "CSPINE", - "PatientPosition": "HFS", - "SoftwareVersions": "27_LX_MR_Software_release:DV26.0_R01_1725.a", - "MRAcquisitionType": "3D", - "SeriesDescription": "T2w", - "ProtocolName": "T2w", - "ScanningSequence": "SE", - "SequenceVariant": "SK_OSP", - "ScanOptions": "FC_FREQ_AX_GEMS_FC_NPW_EDR_GEMS_FILTERED_GEMS_ACC_GEMS", - "ImageType": ["ORIGINAL", "PRIMARY", "OTHER"], - "SeriesNumber": 5, - "AcquisitionTime": "18:15:32.000000", - "AcquisitionNumber": 1, - "SliceThickness": 0.8, - "SpacingBetweenSlices": 0.8, - "SAR": 1.074, - "EchoTime": 0.135615, - "RepetitionTime": 2.502, - "FlipAngle": 90, - "PercentPhaseFOV": 100, - "EchoTrainLength": 78, - "AcquisitionMatrixPE": 320, - "ReconMatrixPE": 320, - "PixelBandwidth": 520.812, - "ImageOrientationPatientDICOM": [ - -0, - 1, - 0, - -0, - -0, - -1 ], - "InPlanePhaseEncodingDirectionDICOM": "ROW", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20171215 (OpenJPEG build) GCC7.3.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "GE", + "ManufacturersModelName": "DISCOVERY_MR750", + "InstitutionName": "Stanford_Lucas_Center", + "DeviceSerialNumber": "0000415723SCHMR2", + "StationName": "lc3t3", + "BodyPartExamined": "CSPINE", + "PatientPosition": "HFS", + "SoftwareVersions": "27_LX_MR_Software_release:DV26.0_R01_1725.a", + "MRAcquisitionType": "3D", + "SeriesDescription": "T2w", + "ProtocolName": "T2w", + "ScanningSequence": "SE", + "SequenceVariant": "SK_OSP", + "ScanOptions": "FC_FREQ_AX_GEMS_FC_NPW_EDR_GEMS_FILTERED_GEMS_ACC_GEMS", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "OTHER" + ], + "SeriesNumber": 5, + "AcquisitionTime": "18:15:32.000000", + "AcquisitionNumber": 1, + "SliceThickness": 0.8, + "SpacingBetweenSlices": 0.8, + "SAR": 1.074, + "EchoTime": 0.135615, + "RepetitionTime": 2.502, + "FlipAngle": 90, + "PercentPhaseFOV": 100, + "EchoTrainLength": 78, + "AcquisitionMatrixPE": 320, + "ReconMatrixPE": 320, + "PixelBandwidth": 520.812, + "ImageOrientationPatientDICOM": [ + 0, + 1, + 0, + 0, + 0, + -1 + ], + "InPlanePhaseEncodingDirectionDICOM": "ROW", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20171215 (OpenJPEG build) GCC7.3.0", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-strasbourg01/anat/sub-strasbourg01_flip-1_mt-on_space-other_MTS.json b/derivatives/data_preprocessed/sub-strasbourg01/anat/sub-strasbourg01_flip-1_mt-on_space-other_MTS.json index b35922daee..cee0b0add2 100644 --- a/derivatives/data_preprocessed/sub-strasbourg01/anat/sub-strasbourg01_flip-1_mt-on_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-strasbourg01/anat/sub-strasbourg01_flip-1_mt-on_space-other_MTS.json @@ -1,71 +1,74 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.202, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Verio", - "InstitutionName": "IRIS", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "Place_de_l_Hopital_1_Strasbourg_District_FR_67000", - "DeviceSerialNumber": "40480", - "StationName": "MEDPC", - "PatientPosition": "HFS", - "ProcedureStepDescription": "PROTOCOLES_METHODO", - "SoftwareVersions": "syngo_MR_B17", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-MT1", - "ProtocolName": "GRE-MT1", - "ScanningSequence": "GR", - "SequenceVariant": "MTC_SP", - "ScanOptions": "MT", - "SequenceName": "_fl3d1", + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 123.202, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Verio", + "InstitutionName": "IRIS", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "Place_de_l_Hopital_1_Strasbourg_District_FR_67000", + "DeviceSerialNumber": "40480", + "StationName": "MEDPC", + "PatientPosition": "HFS", + "ProcedureStepDescription": "PROTOCOLES_METHODO", + "SoftwareVersions": "syngo_MR_B17", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-MT1", + "ProtocolName": "GRE-MT1", + "ScanningSequence": "GR", + "SequenceVariant": "MTC_SP", + "ScanOptions": "MT", + "SequenceName": "_fl3d1", "ImageType": [ - "ORIGINAL", - "PRIMARY", - "M", + "ORIGINAL", + "PRIMARY", + "M", "DIS2D" - ], - "SeriesNumber": 7, - "AcquisitionTime": "10:25:6.787500", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SAR": 0.708181, - "EchoTime": 0.0035, - "RepetitionTime": 0.035, - "FlipAngle": 9, - "PartialFourier": 1, - "BaseResolution": 256, + ], + "SeriesNumber": 7, + "AcquisitionTime": "10:25:6.787500", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SAR": 0.708181, + "EchoTime": 0.0035, + "RepetitionTime": 0.035, + "FlipAngle": 9, + "PartialFourier": 1, + "BaseResolution": 256, "ShimSetting": [ - -8544, - 1245, - 1843, - -280, - 497, - 1247, - 262, + -8544, + 1245, + 1843, + -280, + 497, + 1247, + 262, 146 - ], - "TxRefAmp": 470.431, - "PhaseResolution": 1, - "ReceiveCoilName": "NeckMatrix", - "CoilString": "D:NE1_2", - "PulseSequenceDetails": "%SiemensSeq%_gre", - "PercentPhaseFOV": 100, - "PhaseEncodingSteps": 255, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 256, - "PixelBandwidth": 260, - "DwellTime": 7.5e-06, + ], + "TxRefAmp": 470.431, + "PhaseResolution": 1, + "ReceiveCoilName": "NeckMatrix", + "CoilString": 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b/derivatives/data_preprocessed/sub-strasbourg01/anat/sub-strasbourg01_flip-2_mt-off_space-other_MTS.json index e6ac0558a6..19065fa688 100644 --- a/derivatives/data_preprocessed/sub-strasbourg01/anat/sub-strasbourg01_flip-2_mt-off_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-strasbourg01/anat/sub-strasbourg01_flip-2_mt-off_space-other_MTS.json @@ -1,70 +1,73 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.202, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Verio", - "InstitutionName": "IRIS", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "Place_de_l_Hopital_1_Strasbourg_District_FR_67000", - "DeviceSerialNumber": "40480", - "StationName": "MEDPC", - "PatientPosition": "HFS", - "ProcedureStepDescription": "PROTOCOLES_METHODO", - "SoftwareVersions": "syngo_MR_B17", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-T1w", - "ProtocolName": "GRE-T1w", - "ScanningSequence": "GR", - "SequenceVariant": 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b/derivatives/data_preprocessed/sub-strasbourg01/anat/sub-strasbourg01_space-other_T1w.json @@ -1,73 +1,77 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.202, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Verio", - "InstitutionName": "IRIS", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "Place_de_l_Hopital_1_Strasbourg_District_FR_67000", - "DeviceSerialNumber": "40480", - "StationName": "MEDPC", - "PatientPosition": "HFS", - "ProcedureStepDescription": "PROTOCOLES_METHODO", - "SoftwareVersions": "syngo_MR_B17", - "MRAcquisitionType": "3D", - "SeriesDescription": "T1w", - "ProtocolName": "T1w", - "ScanningSequence": "GR_IR", - "SequenceVariant": "SP_MP", - "ScanOptions": "IR", - "SequenceName": "_tfl3d1", + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 123.202, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Verio", + "InstitutionName": "IRIS", + "InstitutionalDepartmentName": 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"2.1.4", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-strasbourg02/anat/sub-strasbourg02_flip-2_mt-off_space-other_MTS.json b/derivatives/data_preprocessed/sub-strasbourg02/anat/sub-strasbourg02_flip-2_mt-off_space-other_MTS.json index 383a2b50f2..6f22e66704 100644 --- a/derivatives/data_preprocessed/sub-strasbourg02/anat/sub-strasbourg02_flip-2_mt-off_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-strasbourg02/anat/sub-strasbourg02_flip-2_mt-off_space-other_MTS.json @@ -1,70 +1,73 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.202, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Verio", - "InstitutionName": "IRIS", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "Place_de_l_Hopital_1_Strasbourg_District_FR_67000", - "DeviceSerialNumber": "40480", - "StationName": "MEDPC", - "PatientPosition": "HFS", - 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a/derivatives/data_preprocessed/sub-strasbourg02/anat/sub-strasbourg02_space-other_T1w.json b/derivatives/data_preprocessed/sub-strasbourg02/anat/sub-strasbourg02_space-other_T1w.json index 9680cebc2c..49acefacda 100644 --- a/derivatives/data_preprocessed/sub-strasbourg02/anat/sub-strasbourg02_space-other_T1w.json +++ b/derivatives/data_preprocessed/sub-strasbourg02/anat/sub-strasbourg02_space-other_T1w.json @@ -1,73 +1,77 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.202, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Verio", - "InstitutionName": "IRIS", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "Place_de_l_Hopital_1_Strasbourg_District_FR_67000", - "DeviceSerialNumber": "40480", - "StationName": "MEDPC", - "PatientPosition": "HFS", - "ProcedureStepDescription": "PROTOCOLES_METHODO", - "SoftwareVersions": "syngo_MR_B17", - "MRAcquisitionType": "3D", - "SeriesDescription": "T1w", - "ProtocolName": "T1w", - 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b/derivatives/data_preprocessed/sub-strasbourg02/anat/sub-strasbourg02_space-other_T2star.json index f95626aa89..c1c560f500 100644 --- a/derivatives/data_preprocessed/sub-strasbourg02/anat/sub-strasbourg02_space-other_T2star.json +++ b/derivatives/data_preprocessed/sub-strasbourg02/anat/sub-strasbourg02_space-other_T2star.json @@ -71,5 +71,9 @@ "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20181125 GCC4.9.2", "Dcm2bidsVersion": "2.1.4", - "AcquisitionDuration": 290.0 + "AcquisitionDuration": 290.0, + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-strasbourg02/anat/sub-strasbourg02_space-other_T2w.json b/derivatives/data_preprocessed/sub-strasbourg02/anat/sub-strasbourg02_space-other_T2w.json index 790809753a..a3b408d5b1 100644 --- a/derivatives/data_preprocessed/sub-strasbourg02/anat/sub-strasbourg02_space-other_T2w.json +++ b/derivatives/data_preprocessed/sub-strasbourg02/anat/sub-strasbourg02_space-other_T2w.json @@ -1,73 +1,77 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.202, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Verio", - "InstitutionName": "IRIS", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "Place_de_l_Hopital_1_Strasbourg_District_FR_67000", - "DeviceSerialNumber": "40480", - "StationName": "MEDPC", - "PatientPosition": "HFS", - "ProcedureStepDescription": "PROTOCOLES_METHODO", - "SoftwareVersions": "syngo_MR_B17", - "MRAcquisitionType": "3D", - "SeriesDescription": "T2w", - "ProtocolName": "T2w", - "ScanningSequence": "SE", - "SequenceVariant": "SK_SP", - "ScanOptions": "PFP", - "SequenceName": "_spcR3d1_87", + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 123.202, + "Manufacturer": "Siemens", + 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+++ b/derivatives/data_preprocessed/sub-strasbourg03/anat/sub-strasbourg03_flip-1_mt-on_space-other_MTS.json @@ -1,72 +1,75 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.202, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Verio", - "InstitutionName": "IRIS", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "Place_de_l_Hopital_1_Strasbourg_District_FR_67000", - "DeviceSerialNumber": "40480", - "StationName": "MEDPC", - "PatientPosition": "HFS", - "ProcedureStepDescription": "PROTOCOLES_METHODO", - "SoftwareVersions": "syngo_MR_B17", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-MT1", - "ProtocolName": "GRE-MT1", - "ScanningSequence": "GR", - "SequenceVariant": "MTC_SP", - "ScanOptions": "MT", - "SequenceName": "_fl3d1", + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 123.202, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Verio", + "InstitutionName": "IRIS", + 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GCC4.9.2", - "Dcm2bidsVersion": "2.1.4" + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181125 GCC4.9.2", + "Dcm2bidsVersion": "2.1.4", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-strasbourg03/anat/sub-strasbourg03_space-other_T1w.json b/derivatives/data_preprocessed/sub-strasbourg03/anat/sub-strasbourg03_space-other_T1w.json index fc9274af4d..ee1f52ff50 100644 --- a/derivatives/data_preprocessed/sub-strasbourg03/anat/sub-strasbourg03_space-other_T1w.json +++ b/derivatives/data_preprocessed/sub-strasbourg03/anat/sub-strasbourg03_space-other_T1w.json @@ -1,73 +1,77 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.202, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Verio", - "InstitutionName": "IRIS", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": 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a/derivatives/data_preprocessed/sub-strasbourg04/anat/sub-strasbourg04_flip-1_mt-on_space-other_MTS.json b/derivatives/data_preprocessed/sub-strasbourg04/anat/sub-strasbourg04_flip-1_mt-on_space-other_MTS.json index 576ee45060..68b2d4b3ce 100644 --- a/derivatives/data_preprocessed/sub-strasbourg04/anat/sub-strasbourg04_flip-1_mt-on_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-strasbourg04/anat/sub-strasbourg04_flip-1_mt-on_space-other_MTS.json @@ -1,72 +1,75 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.202, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Verio", - "InstitutionName": "IRIS", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "Place_de_l_Hopital_1_Strasbourg_District_FR_67000", - "DeviceSerialNumber": "40480", - "StationName": "MEDPC", - "PatientPosition": "HFS", - "ProcedureStepDescription": "PROTOCOLES_METHODO", - "SoftwareVersions": "syngo_MR_B17", - "MRAcquisitionType": "3D", - 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b/derivatives/data_preprocessed/sub-strasbourg04/anat/sub-strasbourg04_flip-2_mt-off_space-other_MTS.json index ea42a82777..7b68bdd395 100644 --- a/derivatives/data_preprocessed/sub-strasbourg04/anat/sub-strasbourg04_flip-2_mt-off_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-strasbourg04/anat/sub-strasbourg04_flip-2_mt-off_space-other_MTS.json @@ -1,71 +1,74 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.202, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Verio", - "InstitutionName": "IRIS", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "Place_de_l_Hopital_1_Strasbourg_District_FR_67000", - "DeviceSerialNumber": "40480", - "StationName": "MEDPC", - "PatientPosition": "HFS", - "ProcedureStepDescription": "PROTOCOLES_METHODO", - "SoftwareVersions": "syngo_MR_B17", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-T1w", - "ProtocolName": "GRE-T1w", - "ScanningSequence": "GR", - "SequenceVariant": 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b/derivatives/data_preprocessed/sub-strasbourg04/anat/sub-strasbourg04_space-other_T1w.json @@ -1,73 +1,77 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.202, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Verio", - "InstitutionName": "IRIS", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "Place_de_l_Hopital_1_Strasbourg_District_FR_67000", - "DeviceSerialNumber": "40480", - "StationName": "MEDPC", - "PatientPosition": "HFS", - "ProcedureStepDescription": "PROTOCOLES_METHODO", - "SoftwareVersions": "syngo_MR_B17", - "MRAcquisitionType": "3D", - "SeriesDescription": "T1w", - "ProtocolName": "T1w", - "ScanningSequence": "GR_IR", - "SequenceVariant": "SP_MP", - "ScanOptions": "IR", - "SequenceName": "_tfl3d1", + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 123.202, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Verio", + "InstitutionName": "IRIS", + "InstitutionalDepartmentName": 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a/derivatives/data_preprocessed/sub-strasbourg05/anat/sub-strasbourg05_flip-2_mt-off_space-other_MTS.json b/derivatives/data_preprocessed/sub-strasbourg05/anat/sub-strasbourg05_flip-2_mt-off_space-other_MTS.json index ef19b1ee16..eb7623ebc9 100644 --- a/derivatives/data_preprocessed/sub-strasbourg05/anat/sub-strasbourg05_flip-2_mt-off_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-strasbourg05/anat/sub-strasbourg05_flip-2_mt-off_space-other_MTS.json @@ -1,71 +1,74 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.202, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Verio", - "InstitutionName": "IRIS", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "Place_de_l_Hopital_1_Strasbourg_District_FR_67000", - "DeviceSerialNumber": "40480", - "StationName": "MEDPC", - "PatientPosition": "HFS", - "ProcedureStepDescription": "PROTOCOLES_METHODO", - "SoftwareVersions": "syngo_MR_B17", - "MRAcquisitionType": "3D", - 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a/derivatives/data_preprocessed/sub-strasbourg05/anat/sub-strasbourg05_space-other_T1w.json +++ b/derivatives/data_preprocessed/sub-strasbourg05/anat/sub-strasbourg05_space-other_T1w.json @@ -1,73 +1,77 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.202, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Verio", - "InstitutionName": "IRIS", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "Place_de_l_Hopital_1_Strasbourg_District_FR_67000", - "DeviceSerialNumber": "40480", - "StationName": "MEDPC", - "PatientPosition": "HFS", - "ProcedureStepDescription": "PROTOCOLES_METHODO", - "SoftwareVersions": "syngo_MR_B17", - "MRAcquisitionType": "3D", - "SeriesDescription": "T1w", - "ProtocolName": "T1w", - "ScanningSequence": "GR_IR", - "SequenceVariant": "SP_MP", - "ScanOptions": "IR", - "SequenceName": "_tfl3d1", + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 123.202, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Verio", + "InstitutionName": "IRIS", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "Place_de_l_Hopital_1_Strasbourg_District_FR_67000", + "DeviceSerialNumber": "40480", + "StationName": "MEDPC", + "PatientPosition": "HFS", + "ProcedureStepDescription": "PROTOCOLES_METHODO", + "SoftwareVersions": "syngo_MR_B17", + "MRAcquisitionType": "3D", + "SeriesDescription": "T1w", + "ProtocolName": "T1w", + "ScanningSequence": "GR_IR", + "SequenceVariant": "SP_MP", + "ScanOptions": "IR", + "SequenceName": "_tfl3d1", "ImageType": [ - "ORIGINAL", - "PRIMARY", - "M", - "NORM", + "ORIGINAL", + "PRIMARY", + "M", + "NORM", "DIS2D" - ], - "SeriesNumber": 3, - "AcquisitionTime": "14:44:16.982500", - "AcquisitionNumber": 1, - "SliceThickness": 1, - "SAR": 0.0517148, - "EchoTime": 0.00321, - "RepetitionTime": 2, - "InversionTime": 1, - "FlipAngle": 9, - "PartialFourier": 1, - "BaseResolution": 320, + ], + "SeriesNumber": 3, + "AcquisitionTime": "14:44:16.982500", + "AcquisitionNumber": 1, + "SliceThickness": 1, + "SAR": 0.0517148, + "EchoTime": 0.00321, + "RepetitionTime": 2, + "InversionTime": 1, + "FlipAngle": 9, + "PartialFourier": 1, + "BaseResolution": 320, "ShimSetting": [ - -8596, - 1179, - 1914, - -119, - -46, - 58, - 231, + -8596, + 1179, + 1914, + -119, + -46, + 58, + 231, -44 - ], - "TxRefAmp": 390.965, - "PhaseResolution": 1, - "ReceiveCoilName": "NeckMatrix", - "CoilString": "T:HEA;HEP;NE1_2;SP1", - "PulseSequenceDetails": "%SiemensSeq%_tfl", - "PercentPhaseFOV": 81.25, - "PhaseEncodingSteps": 259, - "AcquisitionMatrixPE": 260, - "ReconMatrixPE": 320, - "PixelBandwidth": 150, - "DwellTime": 1.04e-05, + ], + "TxRefAmp": 390.965, + "PhaseResolution": 1, + "ReceiveCoilName": "NeckMatrix", + "CoilString": "T:HEA;HEP;NE1_2;SP1", + "PulseSequenceDetails": "%SiemensSeq%_tfl", + "PercentPhaseFOV": 81.25, + "PhaseEncodingSteps": 259, + "AcquisitionMatrixPE": 260, + "ReconMatrixPE": 320, + "PixelBandwidth": 150, + 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b/derivatives/data_preprocessed/sub-strasbourg05/anat/sub-strasbourg05_space-other_T2star.json @@ -71,5 +71,9 @@ "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20181125 GCC4.9.2", "Dcm2bidsVersion": "2.1.4", - "AcquisitionDuration": 290.0 + "AcquisitionDuration": 290.0, + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-strasbourg05/anat/sub-strasbourg05_space-other_T2w.json b/derivatives/data_preprocessed/sub-strasbourg05/anat/sub-strasbourg05_space-other_T2w.json index 40fa3d8e4a..4d1cb3fe33 100644 --- a/derivatives/data_preprocessed/sub-strasbourg05/anat/sub-strasbourg05_space-other_T2w.json +++ b/derivatives/data_preprocessed/sub-strasbourg05/anat/sub-strasbourg05_space-other_T2w.json @@ -1,73 +1,77 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.202, - "Manufacturer": "Siemens", - 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a/derivatives/data_preprocessed/sub-strasbourg06/anat/sub-strasbourg06_space-other_T1w.json b/derivatives/data_preprocessed/sub-strasbourg06/anat/sub-strasbourg06_space-other_T1w.json index 17a9e10be5..10762c6c80 100644 --- a/derivatives/data_preprocessed/sub-strasbourg06/anat/sub-strasbourg06_space-other_T1w.json +++ b/derivatives/data_preprocessed/sub-strasbourg06/anat/sub-strasbourg06_space-other_T1w.json @@ -1,73 +1,77 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.202, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Verio", - "InstitutionName": "IRIS", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "Place_de_l_Hopital_1_Strasbourg_District_FR_67000", - "DeviceSerialNumber": "40480", - "StationName": "MEDPC", - "PatientPosition": "HFS", - "ProcedureStepDescription": "PROTOCOLES_METHODO", - "SoftwareVersions": "syngo_MR_B17", - "MRAcquisitionType": "3D", - "SeriesDescription": "T1w", - "ProtocolName": "T1w", - 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b/derivatives/data_preprocessed/sub-strasbourg06/anat/sub-strasbourg06_space-other_T2star.json index 734a7ab866..6e46c83258 100644 --- a/derivatives/data_preprocessed/sub-strasbourg06/anat/sub-strasbourg06_space-other_T2star.json +++ b/derivatives/data_preprocessed/sub-strasbourg06/anat/sub-strasbourg06_space-other_T2star.json @@ -71,5 +71,9 @@ "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20181125 GCC4.9.2", "Dcm2bidsVersion": "2.1.4", - "AcquisitionDuration": 290.0 + "AcquisitionDuration": 290.0, + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-strasbourg06/anat/sub-strasbourg06_space-other_T2w.json b/derivatives/data_preprocessed/sub-strasbourg06/anat/sub-strasbourg06_space-other_T2w.json index bf5c8c3427..eb46e32cc1 100644 --- 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b/derivatives/data_preprocessed/sub-tehranS01/anat/sub-tehranS01_flip-1_mt-on_space-other_MTS.json @@ -1,65 +1,75 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma", - "InstitutionName": "National_Brain_Mappin_Lab.", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "Street_StreetNo_City_District_IR_ZIP", - "DeviceSerialNumber": "66088", - "StationName": "AWP66088", - "BodyPartExamined": "HEAD", - "PatientPosition": "HFS", - "ProcedureStepDescription": "NBML_Project_P-97162_KHATIBI", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-MT1", - "ProtocolName": "GRE-MT1", - "ScanningSequence": "GR", - "SequenceVariant": "MTC_SP", - "ScanOptions": "MT", - "SequenceName": "_fl3d1", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "DIS2D"], - "SeriesNumber": 7, - "AcquisitionTime": "19:27:14.930000", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SAR": 0.393938, - "EchoTime": 0.00313, - "RepetitionTime": 0.035, - "FlipAngle": 9, - "PartialFourier": 1, - "BaseResolution": 256, - "ShimSetting": [ - 2567, - -4635, - -3671, - -1342, - -274, - 3272, - 98, - -224 ], - "TxRefAmp": 257.075, - "PhaseResolution": 1, - "ReceiveCoilName": "Spine_32", - "ReceiveCoilActiveElements": "HC3,5-7;NC1,2;SP1", - "PulseSequenceDetails": "%SiemensSeq%_gre", - "ConsistencyInfo": "N4_VE11B_LATEST_20150530", - "PercentPhaseFOV": 100, - "PhaseEncodingSteps": 255, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 256, - "ParallelReductionFactorInPlane": 2, - "PixelBandwidth": 260, - "DwellTime": 7.5e-06, - "ImageOrientationPatientDICOM": [ - 1, - 0, - 0, - 0, - 0.992332, - 0.123601 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 GCC5.3.1" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma", + "InstitutionName": "National_Brain_Mappin_Lab.", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "Street_StreetNo_City_District_IR_ZIP", + "DeviceSerialNumber": "66088", + "StationName": "AWP66088", + "BodyPartExamined": "HEAD", + "PatientPosition": "HFS", + "ProcedureStepDescription": "NBML_Project_P-97162_KHATIBI", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-MT1", + "ProtocolName": "GRE-MT1", + "ScanningSequence": "GR", + "SequenceVariant": "MTC_SP", + "ScanOptions": "MT", + "SequenceName": "_fl3d1", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "DIS2D" + ], + "SeriesNumber": 7, + "AcquisitionTime": "19:27:14.930000", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SAR": 0.393938, + "EchoTime": 0.00313, + "RepetitionTime": 0.035, + "FlipAngle": 9, + "PartialFourier": 1, + "BaseResolution": 256, + "ShimSetting": [ + 2567, + -4635, + -3671, + -1342, + -274, + 3272, + 98, + -224 + ], + "TxRefAmp": 257.075, + "PhaseResolution": 1, + "ReceiveCoilName": "Spine_32", + "ReceiveCoilActiveElements": "HC3,5-7;NC1,2;SP1", + "PulseSequenceDetails": "%SiemensSeq%_gre", + "ConsistencyInfo": "N4_VE11B_LATEST_20150530", + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 255, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "ParallelReductionFactorInPlane": 2, + "PixelBandwidth": 260, + "DwellTime": 7.5e-06, + "ImageOrientationPatientDICOM": [ + 1, + 0, + 0, + 0, + 0.992332, + 0.123601 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 GCC5.3.1", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-tehranS01/anat/sub-tehranS01_flip-2_mt-off_space-other_MTS.json b/derivatives/data_preprocessed/sub-tehranS01/anat/sub-tehranS01_flip-2_mt-off_space-other_MTS.json index 0c4201aef3..11359b22c5 100644 --- a/derivatives/data_preprocessed/sub-tehranS01/anat/sub-tehranS01_flip-2_mt-off_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-tehranS01/anat/sub-tehranS01_flip-2_mt-off_space-other_MTS.json @@ -1,64 +1,74 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma", - "InstitutionName": "National_Brain_Mappin_Lab.", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "Street_StreetNo_City_District_IR_ZIP", - "DeviceSerialNumber": "66088", - "StationName": "AWP66088", - "BodyPartExamined": "HEAD", - "PatientPosition": "HFS", - "ProcedureStepDescription": "NBML_Project_P-97162_KHATIBI", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-T1w", - "ProtocolName": "GRE-T1w", - "ScanningSequence": "GR", - "SequenceVariant": "SP", - "SequenceName": "_fl3d1", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "DIS2D"], - "SeriesNumber": 10, - "AcquisitionTime": "19:36:42.920000", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SAR": 0.0255418, - "EchoTime": 0.00313, - "RepetitionTime": 0.015, - "FlipAngle": 15, - "PartialFourier": 1, - "BaseResolution": 256, - "ShimSetting": [ - 2541, - -4635, - -3688, - -1519, - -396, - 2999, - 261, - -147 ], - "TxRefAmp": 257.075, - "PhaseResolution": 1, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC3-7;NC1,2;SP1", - "PulseSequenceDetails": "%SiemensSeq%_gre", - "ConsistencyInfo": "N4_VE11B_LATEST_20150530", - "PercentPhaseFOV": 100, - "PhaseEncodingSteps": 255, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 256, - "ParallelReductionFactorInPlane": 2, - "PixelBandwidth": 260, - "DwellTime": 7.5e-06, - "ImageOrientationPatientDICOM": [ - 1, - 0, - 0, - 0, - 0.992332, - 0.123601 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 GCC5.3.1" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma", + "InstitutionName": "National_Brain_Mappin_Lab.", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "Street_StreetNo_City_District_IR_ZIP", + "DeviceSerialNumber": "66088", + "StationName": "AWP66088", + "BodyPartExamined": "HEAD", + "PatientPosition": "HFS", + "ProcedureStepDescription": "NBML_Project_P-97162_KHATIBI", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-T1w", + "ProtocolName": "GRE-T1w", + "ScanningSequence": "GR", + "SequenceVariant": "SP", + "SequenceName": "_fl3d1", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "DIS2D" + ], + "SeriesNumber": 10, + "AcquisitionTime": "19:36:42.920000", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SAR": 0.0255418, + "EchoTime": 0.00313, + "RepetitionTime": 0.015, + "FlipAngle": 15, + "PartialFourier": 1, + "BaseResolution": 256, + "ShimSetting": [ + 2541, + -4635, + -3688, + -1519, + -396, + 2999, + 261, + -147 + ], + "TxRefAmp": 257.075, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC3-7;NC1,2;SP1", + "PulseSequenceDetails": "%SiemensSeq%_gre", + "ConsistencyInfo": "N4_VE11B_LATEST_20150530", + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 255, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "ParallelReductionFactorInPlane": 2, + "PixelBandwidth": 260, + "DwellTime": 7.5e-06, + "ImageOrientationPatientDICOM": [ + 1, + 0, + 0, + 0, + 0.992332, + 0.123601 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 GCC5.3.1", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-tehranS01/anat/sub-tehranS01_space-other_T1w.json b/derivatives/data_preprocessed/sub-tehranS01/anat/sub-tehranS01_space-other_T1w.json index 99a20ae447..1ad9c65fdc 100644 --- a/derivatives/data_preprocessed/sub-tehranS01/anat/sub-tehranS01_space-other_T1w.json +++ b/derivatives/data_preprocessed/sub-tehranS01/anat/sub-tehranS01_space-other_T1w.json @@ -1,66 +1,79 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma", - "InstitutionName": "National_Brain_Mappin_Lab.", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "Street_StreetNo_City_District_IR_ZIP", - "DeviceSerialNumber": "66088", - "StationName": "AWP66088", - "BodyPartExamined": "HEAD", - "PatientPosition": "HFS", - "ProcedureStepDescription": "NBML_Project_P-97162_KHATIBI", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "T1w", - "ProtocolName": "T1w", - "ScanningSequence": "GR_IR", - "SequenceVariant": "SK_SP_MP", - "ScanOptions": "IR", - "SequenceName": "_tfl3d1_16", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS3D", "DIS2D"], - "SeriesNumber": 4, - "AcquisitionTime": "19:14:47.002500", - "AcquisitionNumber": 1, - "SliceThickness": 1, - "SAR": 0.0500315, - "EchoTime": 0.00372, - "RepetitionTime": 2, - "InversionTime": 1, - "FlipAngle": 9, - "PartialFourier": 1, - "BaseResolution": 320, - "ShimSetting": [ - 2604, - -4469, - -3523, - 64, - -4, - 77, - -23, - -9 ], - "TxRefAmp": 254.183, - "PhaseResolution": 1, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC1,3-7;NC1,2;SP1", - "PulseSequenceDetails": "%SiemensSeq%_tfl", - "ConsistencyInfo": "N4_VE11B_LATEST_20150530", - "PercentPhaseFOV": 81.25, - "PhaseEncodingSteps": 259, - "AcquisitionMatrixPE": 260, - "ReconMatrixPE": 320, - "ParallelReductionFactorInPlane": 2, - "PixelBandwidth": 150, - "DwellTime": 1.04e-05, - "ImageOrientationPatientDICOM": [ - 0, - 1, - 0, - 0, - 0, - -1 ], - "InPlanePhaseEncodingDirectionDICOM": "ROW", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 GCC5.3.1" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma", + "InstitutionName": "National_Brain_Mappin_Lab.", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "Street_StreetNo_City_District_IR_ZIP", + "DeviceSerialNumber": "66088", + "StationName": "AWP66088", + "BodyPartExamined": "HEAD", + "PatientPosition": "HFS", + "ProcedureStepDescription": "NBML_Project_P-97162_KHATIBI", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "T1w", + "ProtocolName": "T1w", + "ScanningSequence": "GR_IR", + "SequenceVariant": "SK_SP_MP", + "ScanOptions": "IR", + "SequenceName": "_tfl3d1_16", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS3D", + "DIS2D" + ], + "SeriesNumber": 4, + "AcquisitionTime": "19:14:47.002500", + "AcquisitionNumber": 1, + "SliceThickness": 1, + "SAR": 0.0500315, + "EchoTime": 0.00372, + "RepetitionTime": 2, + "InversionTime": 1, + "FlipAngle": 9, + "PartialFourier": 1, + "BaseResolution": 320, + "ShimSetting": [ + 2604, + -4469, + -3523, + 64, + -4, + 77, + -23, + -9 + ], + "TxRefAmp": 254.183, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC1,3-7;NC1,2;SP1", + "PulseSequenceDetails": "%SiemensSeq%_tfl", + "ConsistencyInfo": "N4_VE11B_LATEST_20150530", + "PercentPhaseFOV": 81.25, + "PhaseEncodingSteps": 259, + "AcquisitionMatrixPE": 260, + "ReconMatrixPE": 320, + "ParallelReductionFactorInPlane": 2, + "PixelBandwidth": 150, + "DwellTime": 1.04e-05, + "ImageOrientationPatientDICOM": [ + 0, + 1, + 0, + 0, + 0, + -1 + ], + "InPlanePhaseEncodingDirectionDICOM": "ROW", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 GCC5.3.1", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-tehranS01/anat/sub-tehranS01_space-other_T2star.json b/derivatives/data_preprocessed/sub-tehranS01/anat/sub-tehranS01_space-other_T2star.json index 7000a8c252..f5dedad1ac 100644 --- a/derivatives/data_preprocessed/sub-tehranS01/anat/sub-tehranS01_space-other_T2star.json +++ b/derivatives/data_preprocessed/sub-tehranS01/anat/sub-tehranS01_space-other_T2star.json @@ -73,5 +73,9 @@ "InPlanePhaseEncodingDirectionDICOM": "COL", "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20180622 GCC5.3.1", - "AcquisitionDuration": 285.0 + "AcquisitionDuration": 285.0, + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-tehranS01/anat/sub-tehranS01_space-other_T2w.json b/derivatives/data_preprocessed/sub-tehranS01/anat/sub-tehranS01_space-other_T2w.json index 9e3e922c9b..c294bb7c55 100644 --- a/derivatives/data_preprocessed/sub-tehranS01/anat/sub-tehranS01_space-other_T2w.json +++ b/derivatives/data_preprocessed/sub-tehranS01/anat/sub-tehranS01_space-other_T2w.json @@ -1,67 +1,80 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma", - "InstitutionName": "National_Brain_Mappin_Lab.", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "Street_StreetNo_City_District_IR_ZIP", - "DeviceSerialNumber": "66088", - "StationName": "AWP66088", - "BodyPartExamined": "HEAD", - "PatientPosition": "HFS", - "ProcedureStepDescription": "NBML_Project_P-97162_KHATIBI", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "T2w", - "ProtocolName": "T2w", - "ScanningSequence": "SE", - "SequenceVariant": "SK_SP_OSP", - "ScanOptions": "PFP", - "SequenceName": "_spcR_100", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS3D", "DIS2D"], - "SeriesNumber": 5, - "AcquisitionTime": "19:19:48.110000", - "AcquisitionNumber": 1, - "SliceThickness": 0.8, - "SAR": 0.398297, - "EchoTime": 0.12, - "RepetitionTime": 1.5, - "FlipAngle": 120, - "PartialFourier": 1, - "BaseResolution": 320, - "ShimSetting": [ - 2604, - -4469, - -3523, - 64, - -4, - 77, - -23, - -9 ], - "TxRefAmp": 257.075, - "PhaseResolution": 1, - "PhaseOversampling": 0.8, - "ReceiveCoilName": "Spine_32", - "ReceiveCoilActiveElements": "HC3-7;NC1,2;SP1", - "PulseSequenceDetails": "%SiemensSeq%_tse_vfl", - "ConsistencyInfo": "N4_VE11B_LATEST_20150530", - "PercentPhaseFOV": 100, - "EchoTrainLength": 76, - "PhaseEncodingSteps": 422, - "AcquisitionMatrixPE": 320, - "ReconMatrixPE": 320, - "ParallelReductionFactorInPlane": 3, - "PixelBandwidth": 625, - "DwellTime": 2.5e-06, - "ImageOrientationPatientDICOM": [ - -0.000626212, - 1, - -3.712e-12, - -0.0209259, - -1.3104e-05, - -0.999781 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 GCC5.3.1" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma", + "InstitutionName": "National_Brain_Mappin_Lab.", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "Street_StreetNo_City_District_IR_ZIP", + "DeviceSerialNumber": "66088", + "StationName": "AWP66088", + "BodyPartExamined": "HEAD", + "PatientPosition": "HFS", + "ProcedureStepDescription": "NBML_Project_P-97162_KHATIBI", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "T2w", + "ProtocolName": "T2w", + "ScanningSequence": "SE", + "SequenceVariant": "SK_SP_OSP", + "ScanOptions": "PFP", + "SequenceName": "_spcR_100", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS3D", + "DIS2D" + ], + "SeriesNumber": 5, + "AcquisitionTime": "19:19:48.110000", + "AcquisitionNumber": 1, + "SliceThickness": 0.8, + "SAR": 0.398297, + "EchoTime": 0.12, + "RepetitionTime": 1.5, + "FlipAngle": 120, + "PartialFourier": 1, + "BaseResolution": 320, + "ShimSetting": [ + 2604, + -4469, + -3523, + 64, + -4, + 77, + -23, + -9 + ], + "TxRefAmp": 257.075, + "PhaseResolution": 1, + "PhaseOversampling": 0.8, + "ReceiveCoilName": "Spine_32", + "ReceiveCoilActiveElements": "HC3-7;NC1,2;SP1", + "PulseSequenceDetails": "%SiemensSeq%_tse_vfl", + "ConsistencyInfo": "N4_VE11B_LATEST_20150530", + "PercentPhaseFOV": 100, + "EchoTrainLength": 76, + "PhaseEncodingSteps": 422, + "AcquisitionMatrixPE": 320, + "ReconMatrixPE": 320, + "ParallelReductionFactorInPlane": 3, + "PixelBandwidth": 625, + "DwellTime": 2.5e-06, + "ImageOrientationPatientDICOM": [ + -0.000626212, + 1, + -3.712e-12, + -0.0209259, + -1.3104e-05, + -0.999781 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 GCC5.3.1", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-tehranS02/anat/sub-tehranS02_flip-1_mt-on_space-other_MTS.json b/derivatives/data_preprocessed/sub-tehranS02/anat/sub-tehranS02_flip-1_mt-on_space-other_MTS.json index 8890c21edf..057e0c6566 100644 --- a/derivatives/data_preprocessed/sub-tehranS02/anat/sub-tehranS02_flip-1_mt-on_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-tehranS02/anat/sub-tehranS02_flip-1_mt-on_space-other_MTS.json @@ -1,65 +1,75 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma", - "InstitutionName": "National_Brain_Mappin_Lab.", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "Street_StreetNo_City_District_IR_ZIP", - "DeviceSerialNumber": "66088", - "StationName": "AWP66088", - "BodyPartExamined": "HEAD", - "PatientPosition": "HFS", - "ProcedureStepDescription": "NBML_Project_P-97162_KHATIBI", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-MT1", - "ProtocolName": "GRE-MT1", - "ScanningSequence": "GR", - "SequenceVariant": "MTC_SP", - "ScanOptions": "MT", - "SequenceName": "_fl3d1", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "DIS2D"], - "SeriesNumber": 7, - "AcquisitionTime": "21:32:39.937500", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SAR": 0.48589, - "EchoTime": 0.00313, - "RepetitionTime": 0.035, - "FlipAngle": 9, - "PartialFourier": 1, - "BaseResolution": 256, - "ShimSetting": [ - 2545, - -4347, - -3608, - -3032, - -200, - 2833, - -1116, - 296 ], - "TxRefAmp": 281.352, - "PhaseResolution": 1, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC5,7;NC1,2", - "PulseSequenceDetails": "%SiemensSeq%_gre", - "ConsistencyInfo": "N4_VE11B_LATEST_20150530", - "PercentPhaseFOV": 100, - "PhaseEncodingSteps": 255, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 256, - "ParallelReductionFactorInPlane": 2, - "PixelBandwidth": 260, - "DwellTime": 7.5e-06, - "ImageOrientationPatientDICOM": [ - 0.999263, - 0.000775991, - 0.0383746, - -3.09148e-09, - 0.999796, - -0.0202173 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 GCC5.3.1" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma", + "InstitutionName": "National_Brain_Mappin_Lab.", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "Street_StreetNo_City_District_IR_ZIP", + "DeviceSerialNumber": "66088", + "StationName": "AWP66088", + "BodyPartExamined": "HEAD", + "PatientPosition": "HFS", + "ProcedureStepDescription": "NBML_Project_P-97162_KHATIBI", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-MT1", + "ProtocolName": "GRE-MT1", + "ScanningSequence": "GR", + "SequenceVariant": "MTC_SP", + "ScanOptions": "MT", + "SequenceName": "_fl3d1", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "DIS2D" + ], + "SeriesNumber": 7, + "AcquisitionTime": "21:32:39.937500", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SAR": 0.48589, + "EchoTime": 0.00313, + "RepetitionTime": 0.035, + "FlipAngle": 9, + "PartialFourier": 1, + "BaseResolution": 256, + "ShimSetting": [ + 2545, + -4347, + -3608, + -3032, + -200, + 2833, + -1116, + 296 + ], + "TxRefAmp": 281.352, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC5,7;NC1,2", + "PulseSequenceDetails": "%SiemensSeq%_gre", + "ConsistencyInfo": "N4_VE11B_LATEST_20150530", + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 255, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "ParallelReductionFactorInPlane": 2, + "PixelBandwidth": 260, + "DwellTime": 7.5e-06, + "ImageOrientationPatientDICOM": [ + 0.999263, + 0.000775991, + 0.0383746, + -3.09148e-09, + 0.999796, + -0.0202173 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 GCC5.3.1", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-tehranS02/anat/sub-tehranS02_flip-2_mt-off_space-other_MTS.json b/derivatives/data_preprocessed/sub-tehranS02/anat/sub-tehranS02_flip-2_mt-off_space-other_MTS.json index 657b1b21d2..431e5fd512 100644 --- a/derivatives/data_preprocessed/sub-tehranS02/anat/sub-tehranS02_flip-2_mt-off_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-tehranS02/anat/sub-tehranS02_flip-2_mt-off_space-other_MTS.json @@ -1,64 +1,74 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma", - "InstitutionName": "National_Brain_Mappin_Lab.", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "Street_StreetNo_City_District_IR_ZIP", - "DeviceSerialNumber": "66088", - "StationName": "AWP66088", - "BodyPartExamined": "HEAD", - "PatientPosition": "HFS", - "ProcedureStepDescription": "NBML_Project_P-97162_KHATIBI", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-T1w", - "ProtocolName": "GRE-T1w", - "ScanningSequence": "GR", - "SequenceVariant": "SP", - "SequenceName": "_fl3d1", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "DIS2D"], - "SeriesNumber": 10, - "AcquisitionTime": "21:42:8.177500", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SAR": 0.0302752, - "EchoTime": 0.00313, - "RepetitionTime": 0.015, - "FlipAngle": 15, - "PartialFourier": 1, - "BaseResolution": 256, - "ShimSetting": [ - 2578, - -4264, - -3625, - -3231, - -83, - 2853, - -943, - 38 ], - "TxRefAmp": 274.862, - "PhaseResolution": 1, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC3-7;NC1,2;SP1", - "PulseSequenceDetails": "%SiemensSeq%_gre", - "ConsistencyInfo": "N4_VE11B_LATEST_20150530", - "PercentPhaseFOV": 100, - "PhaseEncodingSteps": 255, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 256, - "ParallelReductionFactorInPlane": 2, - "PixelBandwidth": 260, - "DwellTime": 7.5e-06, - "ImageOrientationPatientDICOM": [ - 0.999263, - 0.000775991, - 0.0383746, - -3.09148e-09, - 0.999796, - -0.0202173 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 GCC5.3.1" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma", + "InstitutionName": "National_Brain_Mappin_Lab.", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "Street_StreetNo_City_District_IR_ZIP", + "DeviceSerialNumber": "66088", + "StationName": "AWP66088", + "BodyPartExamined": "HEAD", + "PatientPosition": "HFS", + "ProcedureStepDescription": "NBML_Project_P-97162_KHATIBI", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-T1w", + "ProtocolName": "GRE-T1w", + "ScanningSequence": "GR", + "SequenceVariant": "SP", + "SequenceName": "_fl3d1", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "DIS2D" + ], + "SeriesNumber": 10, + "AcquisitionTime": "21:42:8.177500", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SAR": 0.0302752, + "EchoTime": 0.00313, + "RepetitionTime": 0.015, + "FlipAngle": 15, + "PartialFourier": 1, + "BaseResolution": 256, + "ShimSetting": [ + 2578, + -4264, + -3625, + -3231, + -83, + 2853, + -943, + 38 + ], + "TxRefAmp": 274.862, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC3-7;NC1,2;SP1", + "PulseSequenceDetails": "%SiemensSeq%_gre", + "ConsistencyInfo": "N4_VE11B_LATEST_20150530", + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 255, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "ParallelReductionFactorInPlane": 2, + "PixelBandwidth": 260, + "DwellTime": 7.5e-06, + "ImageOrientationPatientDICOM": [ + 0.999263, + 0.000775991, + 0.0383746, + -3.09148e-09, + 0.999796, + -0.0202173 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 GCC5.3.1", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-tehranS02/anat/sub-tehranS02_space-other_T1w.json b/derivatives/data_preprocessed/sub-tehranS02/anat/sub-tehranS02_space-other_T1w.json index 0713c0ad89..73352fd698 100644 --- a/derivatives/data_preprocessed/sub-tehranS02/anat/sub-tehranS02_space-other_T1w.json +++ b/derivatives/data_preprocessed/sub-tehranS02/anat/sub-tehranS02_space-other_T1w.json @@ -1,66 +1,79 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma", - "InstitutionName": "National_Brain_Mappin_Lab.", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "Street_StreetNo_City_District_IR_ZIP", - "DeviceSerialNumber": "66088", - "StationName": "AWP66088", - "BodyPartExamined": "HEAD", - "PatientPosition": "HFS", - "ProcedureStepDescription": "NBML_Project_P-97162_KHATIBI", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "T1w", - "ProtocolName": "T1w", - "ScanningSequence": "GR_IR", - "SequenceVariant": "SK_SP_MP", - "ScanOptions": "IR", - "SequenceName": "_tfl3d1_16", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS3D", "DIS2D"], - "SeriesNumber": 4, - "AcquisitionTime": "21:20:8.125000", - "AcquisitionNumber": 1, - "SliceThickness": 1, - "SAR": 0.0564284, - "EchoTime": 0.00372, - "RepetitionTime": 2, - "InversionTime": 1, - "FlipAngle": 9, - "PartialFourier": 1, - "BaseResolution": 320, - "ShimSetting": [ - 2604, - -4469, - -3523, - 64, - -4, - 77, - -23, - -9 ], - "TxRefAmp": 266.998, - "PhaseResolution": 1, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC1-7;NC1,2", - "PulseSequenceDetails": "%SiemensSeq%_tfl", - "ConsistencyInfo": "N4_VE11B_LATEST_20150530", - "PercentPhaseFOV": 81.25, - "PhaseEncodingSteps": 259, - "AcquisitionMatrixPE": 260, - "ReconMatrixPE": 320, - "ParallelReductionFactorInPlane": 2, - "PixelBandwidth": 150, - "DwellTime": 1.04e-05, - "ImageOrientationPatientDICOM": [ - 2.52769e-05, - 1, - 8.45304e-09, - 0.0383908, - -9.61952e-07, - -0.999263 ], - "InPlanePhaseEncodingDirectionDICOM": "ROW", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 GCC5.3.1" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma", + "InstitutionName": "National_Brain_Mappin_Lab.", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "Street_StreetNo_City_District_IR_ZIP", + "DeviceSerialNumber": "66088", + "StationName": "AWP66088", + "BodyPartExamined": "HEAD", + "PatientPosition": "HFS", + "ProcedureStepDescription": "NBML_Project_P-97162_KHATIBI", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "T1w", + "ProtocolName": "T1w", + "ScanningSequence": "GR_IR", + "SequenceVariant": "SK_SP_MP", + "ScanOptions": "IR", + "SequenceName": "_tfl3d1_16", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS3D", + "DIS2D" + ], + "SeriesNumber": 4, + "AcquisitionTime": "21:20:8.125000", + "AcquisitionNumber": 1, + "SliceThickness": 1, + "SAR": 0.0564284, + "EchoTime": 0.00372, + "RepetitionTime": 2, + "InversionTime": 1, + "FlipAngle": 9, + "PartialFourier": 1, + "BaseResolution": 320, + "ShimSetting": [ + 2604, + -4469, + -3523, + 64, + -4, + 77, + -23, + -9 + ], + "TxRefAmp": 266.998, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC1-7;NC1,2", + "PulseSequenceDetails": "%SiemensSeq%_tfl", + "ConsistencyInfo": "N4_VE11B_LATEST_20150530", + "PercentPhaseFOV": 81.25, + "PhaseEncodingSteps": 259, + "AcquisitionMatrixPE": 260, + "ReconMatrixPE": 320, + "ParallelReductionFactorInPlane": 2, + "PixelBandwidth": 150, + "DwellTime": 1.04e-05, + "ImageOrientationPatientDICOM": [ + 2.52769e-05, + 1, + 8.45304e-09, + 0.0383908, + -9.61952e-07, + -0.999263 + ], + "InPlanePhaseEncodingDirectionDICOM": "ROW", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 GCC5.3.1", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-tehranS02/anat/sub-tehranS02_space-other_T2star.json b/derivatives/data_preprocessed/sub-tehranS02/anat/sub-tehranS02_space-other_T2star.json index 7ce76b8789..aba19dbd0e 100644 --- a/derivatives/data_preprocessed/sub-tehranS02/anat/sub-tehranS02_space-other_T2star.json +++ b/derivatives/data_preprocessed/sub-tehranS02/anat/sub-tehranS02_space-other_T2star.json @@ -73,5 +73,9 @@ "InPlanePhaseEncodingDirectionDICOM": "COL", "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20180622 GCC5.3.1", - "AcquisitionDuration": 285.0 + "AcquisitionDuration": 285.0, + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-tehranS02/anat/sub-tehranS02_space-other_T2w.json b/derivatives/data_preprocessed/sub-tehranS02/anat/sub-tehranS02_space-other_T2w.json index 2b091db033..b72b0ab936 100644 --- a/derivatives/data_preprocessed/sub-tehranS02/anat/sub-tehranS02_space-other_T2w.json +++ b/derivatives/data_preprocessed/sub-tehranS02/anat/sub-tehranS02_space-other_T2w.json @@ -1,67 +1,80 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma", - "InstitutionName": "National_Brain_Mappin_Lab.", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "Street_StreetNo_City_District_IR_ZIP", - "DeviceSerialNumber": "66088", - "StationName": "AWP66088", - "BodyPartExamined": "HEAD", - "PatientPosition": "HFS", - "ProcedureStepDescription": "NBML_Project_P-97162_KHATIBI", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "T2w", - "ProtocolName": "T2w", - "ScanningSequence": "SE", - "SequenceVariant": "SK_SP_OSP", - "ScanOptions": "PFP", - "SequenceName": "_spcR_100", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS3D", "DIS2D"], - "SeriesNumber": 5, - "AcquisitionTime": "21:24:58.037500", - "AcquisitionNumber": 1, - "SliceThickness": 0.8, - "SAR": 0.456379, - "EchoTime": 0.12, - "RepetitionTime": 1.5, - "FlipAngle": 120, - "PartialFourier": 1, - "BaseResolution": 320, - "ShimSetting": [ - 2604, - -4469, - -3523, - 64, - -4, - 77, - -23, - -9 ], - "TxRefAmp": 273.903, - "PhaseResolution": 1, - "PhaseOversampling": 0.8, - "ReceiveCoilName": "Spine_32", - "ReceiveCoilActiveElements": "HC3-7;NC1,2;SP1", - "PulseSequenceDetails": "%SiemensSeq%_tse_vfl", - "ConsistencyInfo": "N4_VE11B_LATEST_20150530", - "PercentPhaseFOV": 100, - "EchoTrainLength": 76, - "PhaseEncodingSteps": 422, - "AcquisitionMatrixPE": 320, - "ReconMatrixPE": 320, - "ParallelReductionFactorInPlane": 3, - "PixelBandwidth": 625, - "DwellTime": 2.5e-06, - "ImageOrientationPatientDICOM": [ - -9.76175e-05, - 1, - 3.243e-12, - 0.0418612, - 4.08639e-06, - -0.999123 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 GCC5.3.1" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma", + "InstitutionName": "National_Brain_Mappin_Lab.", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "Street_StreetNo_City_District_IR_ZIP", + "DeviceSerialNumber": "66088", + "StationName": "AWP66088", + "BodyPartExamined": "HEAD", + "PatientPosition": "HFS", + "ProcedureStepDescription": "NBML_Project_P-97162_KHATIBI", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "T2w", + "ProtocolName": "T2w", + "ScanningSequence": "SE", + "SequenceVariant": "SK_SP_OSP", + "ScanOptions": "PFP", + "SequenceName": "_spcR_100", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS3D", + "DIS2D" + ], + "SeriesNumber": 5, + "AcquisitionTime": "21:24:58.037500", + "AcquisitionNumber": 1, + "SliceThickness": 0.8, + "SAR": 0.456379, + "EchoTime": 0.12, + "RepetitionTime": 1.5, + "FlipAngle": 120, + "PartialFourier": 1, + "BaseResolution": 320, + "ShimSetting": [ + 2604, + -4469, + -3523, + 64, + -4, + 77, + -23, + -9 + ], + "TxRefAmp": 273.903, + "PhaseResolution": 1, + "PhaseOversampling": 0.8, + "ReceiveCoilName": "Spine_32", + "ReceiveCoilActiveElements": "HC3-7;NC1,2;SP1", + "PulseSequenceDetails": "%SiemensSeq%_tse_vfl", + "ConsistencyInfo": "N4_VE11B_LATEST_20150530", + "PercentPhaseFOV": 100, + "EchoTrainLength": 76, + "PhaseEncodingSteps": 422, + "AcquisitionMatrixPE": 320, + "ReconMatrixPE": 320, + "ParallelReductionFactorInPlane": 3, + "PixelBandwidth": 625, + "DwellTime": 2.5e-06, + "ImageOrientationPatientDICOM": [ + -9.76175e-05, + 1, + 3.243e-12, + 0.0418612, + 4.08639e-06, + -0.999123 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 GCC5.3.1", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-tehranS03/anat/sub-tehranS03_flip-1_mt-on_space-other_MTS.json b/derivatives/data_preprocessed/sub-tehranS03/anat/sub-tehranS03_flip-1_mt-on_space-other_MTS.json index 03c716fe2a..01e784619d 100644 --- a/derivatives/data_preprocessed/sub-tehranS03/anat/sub-tehranS03_flip-1_mt-on_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-tehranS03/anat/sub-tehranS03_flip-1_mt-on_space-other_MTS.json @@ -1,65 +1,75 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma", - "InstitutionName": "National_Brain_Mappin_Lab.", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "Street_StreetNo_City_District_IR_ZIP", - "DeviceSerialNumber": "66088", - "StationName": "AWP66088", - "BodyPartExamined": "HEAD", - "PatientPosition": "HFS", - "ProcedureStepDescription": "NBML_Project_P-97162_KHATIBI", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-MT1", - "ProtocolName": "GRE-MT1", - "ScanningSequence": "GR", - "SequenceVariant": "MTC_SP", - "ScanOptions": "MT", - "SequenceName": "_fl3d1", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "DIS2D"], - "SeriesNumber": 7, - "AcquisitionTime": "21:00:16.937500", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SAR": 0.465542, - "EchoTime": 0.00313, - "RepetitionTime": 0.035, - "FlipAngle": 9, - "PartialFourier": 1, - "BaseResolution": 256, - "ShimSetting": [ - 2627, - -4447, - -3505, - -2380, - 61, - 2306, - -669, - -405 ], - "TxRefAmp": 275.596, - "PhaseResolution": 1, - "ReceiveCoilName": "Spine_32", - "ReceiveCoilActiveElements": "HC3-7;NC1,2;SP1", - "PulseSequenceDetails": "%SiemensSeq%_gre", - "ConsistencyInfo": "N4_VE11B_LATEST_20150530", - "PercentPhaseFOV": 100, - "PhaseEncodingSteps": 255, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 256, - "ParallelReductionFactorInPlane": 2, - "PixelBandwidth": 260, - "DwellTime": 7.5e-06, - "ImageOrientationPatientDICOM": [ - 0.999781, - -0.00233035, - -0.020776, - -2.24318e-08, - 0.993768, - -0.111468 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 GCC5.3.1" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma", + "InstitutionName": "National_Brain_Mappin_Lab.", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "Street_StreetNo_City_District_IR_ZIP", + "DeviceSerialNumber": "66088", + "StationName": "AWP66088", + "BodyPartExamined": "HEAD", + "PatientPosition": "HFS", + "ProcedureStepDescription": "NBML_Project_P-97162_KHATIBI", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-MT1", + "ProtocolName": "GRE-MT1", + "ScanningSequence": "GR", + "SequenceVariant": "MTC_SP", + "ScanOptions": "MT", + "SequenceName": "_fl3d1", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "DIS2D" + ], + "SeriesNumber": 7, + "AcquisitionTime": "21:00:16.937500", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SAR": 0.465542, + "EchoTime": 0.00313, + "RepetitionTime": 0.035, + "FlipAngle": 9, + "PartialFourier": 1, + "BaseResolution": 256, + "ShimSetting": [ + 2627, + -4447, + -3505, + -2380, + 61, + 2306, + -669, + -405 + ], + "TxRefAmp": 275.596, + "PhaseResolution": 1, + "ReceiveCoilName": "Spine_32", + "ReceiveCoilActiveElements": "HC3-7;NC1,2;SP1", + "PulseSequenceDetails": "%SiemensSeq%_gre", + "ConsistencyInfo": "N4_VE11B_LATEST_20150530", + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 255, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "ParallelReductionFactorInPlane": 2, + "PixelBandwidth": 260, + "DwellTime": 7.5e-06, + "ImageOrientationPatientDICOM": [ + 0.999781, + -0.00233035, + -0.020776, + -2.24318e-08, + 0.993768, + -0.111468 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 GCC5.3.1", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-tehranS03/anat/sub-tehranS03_flip-2_mt-off_space-other_MTS.json b/derivatives/data_preprocessed/sub-tehranS03/anat/sub-tehranS03_flip-2_mt-off_space-other_MTS.json index 2bc58db083..e9c6da8a96 100644 --- a/derivatives/data_preprocessed/sub-tehranS03/anat/sub-tehranS03_flip-2_mt-off_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-tehranS03/anat/sub-tehranS03_flip-2_mt-off_space-other_MTS.json @@ -1,64 +1,74 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma", - "InstitutionName": "National_Brain_Mappin_Lab.", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "Street_StreetNo_City_District_IR_ZIP", - "DeviceSerialNumber": "66088", - "StationName": "AWP66088", - "BodyPartExamined": "HEAD", - "PatientPosition": "HFS", - "ProcedureStepDescription": "NBML_Project_P-97162_KHATIBI", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-T1w", - "ProtocolName": "GRE-T1w", - "ScanningSequence": "GR", - "SequenceVariant": "SP", - "SequenceName": "_fl3d1", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "DIS2D"], - "SeriesNumber": 10, - "AcquisitionTime": "21:10:2.170000", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SAR": 0.0301843, - "EchoTime": 0.00313, - "RepetitionTime": 0.015, - "FlipAngle": 15, - "PartialFourier": 1, - "BaseResolution": 256, - "ShimSetting": [ - 2561, - -4455, - -3447, - -1807, - -44, - 1518, - -1064, - -69 ], - "TxRefAmp": 275.596, - "PhaseResolution": 1, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC3-7;NC1,2;SP1", - "PulseSequenceDetails": "%SiemensSeq%_gre", - "ConsistencyInfo": "N4_VE11B_LATEST_20150530", - "PercentPhaseFOV": 100, - "PhaseEncodingSteps": 255, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 256, - "ParallelReductionFactorInPlane": 2, - "PixelBandwidth": 260, - "DwellTime": 7.5e-06, - "ImageOrientationPatientDICOM": [ - 0.999781, - -0.00233035, - -0.020776, - -2.24318e-08, - 0.993768, - -0.111468 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 GCC5.3.1" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma", + "InstitutionName": "National_Brain_Mappin_Lab.", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "Street_StreetNo_City_District_IR_ZIP", + "DeviceSerialNumber": "66088", + "StationName": "AWP66088", + "BodyPartExamined": "HEAD", + "PatientPosition": "HFS", + "ProcedureStepDescription": "NBML_Project_P-97162_KHATIBI", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-T1w", + "ProtocolName": "GRE-T1w", + "ScanningSequence": "GR", + "SequenceVariant": "SP", + "SequenceName": "_fl3d1", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "DIS2D" + ], + "SeriesNumber": 10, + "AcquisitionTime": "21:10:2.170000", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SAR": 0.0301843, + "EchoTime": 0.00313, + "RepetitionTime": 0.015, + "FlipAngle": 15, + "PartialFourier": 1, + "BaseResolution": 256, + "ShimSetting": [ + 2561, + -4455, + -3447, + -1807, + -44, + 1518, + -1064, + -69 + ], + "TxRefAmp": 275.596, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC3-7;NC1,2;SP1", + "PulseSequenceDetails": "%SiemensSeq%_gre", + "ConsistencyInfo": "N4_VE11B_LATEST_20150530", + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 255, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "ParallelReductionFactorInPlane": 2, + "PixelBandwidth": 260, + "DwellTime": 7.5e-06, + "ImageOrientationPatientDICOM": [ + 0.999781, + -0.00233035, + -0.020776, + -2.24318e-08, + 0.993768, + -0.111468 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 GCC5.3.1", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-tehranS03/anat/sub-tehranS03_space-other_T1w.json b/derivatives/data_preprocessed/sub-tehranS03/anat/sub-tehranS03_space-other_T1w.json index a45e0765ca..be6ed1de33 100644 --- a/derivatives/data_preprocessed/sub-tehranS03/anat/sub-tehranS03_space-other_T1w.json +++ b/derivatives/data_preprocessed/sub-tehranS03/anat/sub-tehranS03_space-other_T1w.json @@ -1,66 +1,79 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma", - "InstitutionName": "National_Brain_Mappin_Lab.", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "Street_StreetNo_City_District_IR_ZIP", - "DeviceSerialNumber": "66088", - "StationName": "AWP66088", - "BodyPartExamined": "HEAD", - "PatientPosition": "HFS", - "ProcedureStepDescription": "NBML_Project_P-97162_KHATIBI", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "T1w", - "ProtocolName": "T1w", - "ScanningSequence": "GR_IR", - "SequenceVariant": "SK_SP_MP", - "ScanOptions": "IR", - "SequenceName": "_tfl3d1_16", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS3D", "DIS2D"], - "SeriesNumber": 4, - "AcquisitionTime": "20:48:13.130000", - "AcquisitionNumber": 1, - "SliceThickness": 1, - "SAR": 0.0550001, - "EchoTime": 0.00372, - "RepetitionTime": 2, - "InversionTime": 1, - "FlipAngle": 9, - "PartialFourier": 1, - "BaseResolution": 320, - "ShimSetting": [ - 2604, - -4469, - -3523, - 64, - -4, - 77, - -23, - -9 ], - "TxRefAmp": 263.983, - "PhaseResolution": 1, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC1-7;NC1,2", - "PulseSequenceDetails": "%SiemensSeq%_tfl", - "ConsistencyInfo": "N4_VE11B_LATEST_20150530", - "PercentPhaseFOV": 81.25, - "PhaseEncodingSteps": 259, - "AcquisitionMatrixPE": 260, - "ReconMatrixPE": 320, - "ParallelReductionFactorInPlane": 2, - "PixelBandwidth": 150, - "DwellTime": 1.04e-05, - "ImageOrientationPatientDICOM": [ - 0.00123683, - 0.999999, - -2.039e-08, - -0.0208986, - 2.58278e-05, - -0.999782 ], - "InPlanePhaseEncodingDirectionDICOM": "ROW", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 GCC5.3.1" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma", + "InstitutionName": "National_Brain_Mappin_Lab.", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "Street_StreetNo_City_District_IR_ZIP", + "DeviceSerialNumber": "66088", + "StationName": "AWP66088", + "BodyPartExamined": "HEAD", + "PatientPosition": "HFS", + "ProcedureStepDescription": "NBML_Project_P-97162_KHATIBI", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "T1w", + "ProtocolName": "T1w", + "ScanningSequence": "GR_IR", + "SequenceVariant": "SK_SP_MP", + "ScanOptions": "IR", + "SequenceName": "_tfl3d1_16", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS3D", + "DIS2D" + ], + "SeriesNumber": 4, + "AcquisitionTime": "20:48:13.130000", + "AcquisitionNumber": 1, + "SliceThickness": 1, + "SAR": 0.0550001, + "EchoTime": 0.00372, + "RepetitionTime": 2, + "InversionTime": 1, + "FlipAngle": 9, + "PartialFourier": 1, + "BaseResolution": 320, + "ShimSetting": [ + 2604, + -4469, + -3523, + 64, + -4, + 77, + -23, + -9 + ], + "TxRefAmp": 263.983, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC1-7;NC1,2", + "PulseSequenceDetails": "%SiemensSeq%_tfl", + "ConsistencyInfo": "N4_VE11B_LATEST_20150530", + "PercentPhaseFOV": 81.25, + "PhaseEncodingSteps": 259, + "AcquisitionMatrixPE": 260, + "ReconMatrixPE": 320, + "ParallelReductionFactorInPlane": 2, + "PixelBandwidth": 150, + "DwellTime": 1.04e-05, + "ImageOrientationPatientDICOM": [ + 0.00123683, + 0.999999, + -2.039e-08, + -0.0208986, + 2.58278e-05, + -0.999782 + ], + "InPlanePhaseEncodingDirectionDICOM": "ROW", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 GCC5.3.1", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-tehranS03/anat/sub-tehranS03_space-other_T2star.json b/derivatives/data_preprocessed/sub-tehranS03/anat/sub-tehranS03_space-other_T2star.json index a3ba8371d6..8c2703707e 100644 --- a/derivatives/data_preprocessed/sub-tehranS03/anat/sub-tehranS03_space-other_T2star.json +++ b/derivatives/data_preprocessed/sub-tehranS03/anat/sub-tehranS03_space-other_T2star.json @@ -73,5 +73,9 @@ "InPlanePhaseEncodingDirectionDICOM": "COL", "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20180622 GCC5.3.1", - "AcquisitionDuration": 285.0 + "AcquisitionDuration": 285.0, + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-tehranS03/anat/sub-tehranS03_space-other_T2w.json b/derivatives/data_preprocessed/sub-tehranS03/anat/sub-tehranS03_space-other_T2w.json index 6c493e5ffa..89a1207187 100644 --- a/derivatives/data_preprocessed/sub-tehranS03/anat/sub-tehranS03_space-other_T2w.json +++ b/derivatives/data_preprocessed/sub-tehranS03/anat/sub-tehranS03_space-other_T2w.json @@ -1,67 +1,80 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma", - "InstitutionName": "National_Brain_Mappin_Lab.", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "Street_StreetNo_City_District_IR_ZIP", - "DeviceSerialNumber": "66088", - "StationName": "AWP66088", - "BodyPartExamined": "HEAD", - "PatientPosition": "HFS", - "ProcedureStepDescription": "NBML_Project_P-97162_KHATIBI", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "T2w", - "ProtocolName": "T2w", - "ScanningSequence": "SE", - "SequenceVariant": "SK_SP_OSP", - "ScanOptions": "PFP", - "SequenceName": "_spcR_100", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS3D", "DIS2D"], - "SeriesNumber": 5, - "AcquisitionTime": "20:53:4.037500", - "AcquisitionNumber": 1, - "SliceThickness": 0.8, - "SAR": 0.451101, - "EchoTime": 0.12, - "RepetitionTime": 1.5, - "FlipAngle": 120, - "PartialFourier": 1, - "BaseResolution": 320, - "ShimSetting": [ - 2604, - -4469, - -3523, - 64, - -4, - 77, - -23, - -9 ], - "TxRefAmp": 268.941, - "PhaseResolution": 1, - "PhaseOversampling": 0.8, - "ReceiveCoilName": "Spine_32", - "ReceiveCoilActiveElements": "HC3-7;NC1,2;SP1", - "PulseSequenceDetails": "%SiemensSeq%_tse_vfl", - "ConsistencyInfo": "N4_VE11B_LATEST_20150530", - "PercentPhaseFOV": 100, - "EchoTrainLength": 76, - "PhaseEncodingSteps": 422, - "AcquisitionMatrixPE": 320, - "ReconMatrixPE": 320, - "ParallelReductionFactorInPlane": 3, - "PixelBandwidth": 625, - "DwellTime": 2.5e-06, - "ImageOrientationPatientDICOM": [ - 0.00225959, - 0.999997, - 5.4334e-11, - -0.038308, - 8.65607e-05, - -0.999266 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 GCC5.3.1" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma", + "InstitutionName": "National_Brain_Mappin_Lab.", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "Street_StreetNo_City_District_IR_ZIP", + "DeviceSerialNumber": "66088", + "StationName": "AWP66088", + "BodyPartExamined": "HEAD", + "PatientPosition": "HFS", + "ProcedureStepDescription": "NBML_Project_P-97162_KHATIBI", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "T2w", + "ProtocolName": "T2w", + "ScanningSequence": "SE", + "SequenceVariant": "SK_SP_OSP", + "ScanOptions": "PFP", + "SequenceName": "_spcR_100", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS3D", + "DIS2D" + ], + "SeriesNumber": 5, + "AcquisitionTime": "20:53:4.037500", + "AcquisitionNumber": 1, + "SliceThickness": 0.8, + "SAR": 0.451101, + "EchoTime": 0.12, + "RepetitionTime": 1.5, + "FlipAngle": 120, + "PartialFourier": 1, + "BaseResolution": 320, + "ShimSetting": [ + 2604, + -4469, + -3523, + 64, + -4, + 77, + -23, + -9 + ], + "TxRefAmp": 268.941, + "PhaseResolution": 1, + "PhaseOversampling": 0.8, + "ReceiveCoilName": "Spine_32", + "ReceiveCoilActiveElements": "HC3-7;NC1,2;SP1", + "PulseSequenceDetails": "%SiemensSeq%_tse_vfl", + "ConsistencyInfo": "N4_VE11B_LATEST_20150530", + "PercentPhaseFOV": 100, + "EchoTrainLength": 76, + "PhaseEncodingSteps": 422, + "AcquisitionMatrixPE": 320, + "ReconMatrixPE": 320, + "ParallelReductionFactorInPlane": 3, + "PixelBandwidth": 625, + "DwellTime": 2.5e-06, + "ImageOrientationPatientDICOM": [ + 0.00225959, + 0.999997, + 5.4334e-11, + -0.038308, + 8.65607e-05, + -0.999266 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 GCC5.3.1", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-tehranS04/anat/sub-tehranS04_flip-1_mt-on_space-other_MTS.json b/derivatives/data_preprocessed/sub-tehranS04/anat/sub-tehranS04_flip-1_mt-on_space-other_MTS.json index 7f514827ab..fd5300c4f4 100644 --- a/derivatives/data_preprocessed/sub-tehranS04/anat/sub-tehranS04_flip-1_mt-on_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-tehranS04/anat/sub-tehranS04_flip-1_mt-on_space-other_MTS.json @@ -71,5 +71,8 @@ "InPlanePhaseEncodingDirectionDICOM": "COL", "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20190410 Clang4.0.1", - "Dcm2bidsVersion": "2.1.4" + "Dcm2bidsVersion": "2.1.4", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-tehranS04/anat/sub-tehranS04_flip-2_mt-off_space-other_MTS.json b/derivatives/data_preprocessed/sub-tehranS04/anat/sub-tehranS04_flip-2_mt-off_space-other_MTS.json index 972cebc0dd..499edee6cf 100644 --- a/derivatives/data_preprocessed/sub-tehranS04/anat/sub-tehranS04_flip-2_mt-off_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-tehranS04/anat/sub-tehranS04_flip-2_mt-off_space-other_MTS.json @@ -70,5 +70,8 @@ "InPlanePhaseEncodingDirectionDICOM": "COL", "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20190410 Clang4.0.1", - "Dcm2bidsVersion": "2.1.4" + "Dcm2bidsVersion": "2.1.4", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-tehranS04/anat/sub-tehranS04_space-other_T1w.json b/derivatives/data_preprocessed/sub-tehranS04/anat/sub-tehranS04_space-other_T1w.json index d62fa191da..a549e82197 100644 --- a/derivatives/data_preprocessed/sub-tehranS04/anat/sub-tehranS04_space-other_T1w.json +++ b/derivatives/data_preprocessed/sub-tehranS04/anat/sub-tehranS04_space-other_T1w.json @@ -74,5 +74,9 @@ "InPlanePhaseEncodingDirectionDICOM": "ROW", "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20190410 Clang4.0.1", - "Dcm2bidsVersion": "2.1.4" + "Dcm2bidsVersion": "2.1.4", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-tehranS04/anat/sub-tehranS04_space-other_T2star.json b/derivatives/data_preprocessed/sub-tehranS04/anat/sub-tehranS04_space-other_T2star.json index 3751fc1dbb..79b418bb89 100644 --- a/derivatives/data_preprocessed/sub-tehranS04/anat/sub-tehranS04_space-other_T2star.json +++ b/derivatives/data_preprocessed/sub-tehranS04/anat/sub-tehranS04_space-other_T2star.json @@ -78,5 +78,9 @@ "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20190410 Clang4.0.1", "Dcm2bidsVersion": "2.1.4", - "AcquisitionDuration": 285.0 + "AcquisitionDuration": 285.0, + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-tehranS04/anat/sub-tehranS04_space-other_T2w.json b/derivatives/data_preprocessed/sub-tehranS04/anat/sub-tehranS04_space-other_T2w.json index f7e2a1884c..e5cc36b5b3 100644 --- a/derivatives/data_preprocessed/sub-tehranS04/anat/sub-tehranS04_space-other_T2w.json +++ b/derivatives/data_preprocessed/sub-tehranS04/anat/sub-tehranS04_space-other_T2w.json @@ -76,5 +76,9 @@ "InPlanePhaseEncodingDirectionDICOM": "COL", "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20190410 Clang4.0.1", - "Dcm2bidsVersion": "2.1.4" + "Dcm2bidsVersion": "2.1.4", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-tehranS05/anat/sub-tehranS05_flip-1_mt-on_space-other_MTS.json b/derivatives/data_preprocessed/sub-tehranS05/anat/sub-tehranS05_flip-1_mt-on_space-other_MTS.json index a01c6ec31a..2ea2058e2c 100644 --- a/derivatives/data_preprocessed/sub-tehranS05/anat/sub-tehranS05_flip-1_mt-on_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-tehranS05/anat/sub-tehranS05_flip-1_mt-on_space-other_MTS.json @@ -1,65 +1,75 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma", - "InstitutionName": "National_Brain_Mappin_Lab.", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "Street_StreetNo_City_District_IR_ZIP", - "DeviceSerialNumber": "66088", - "StationName": "AWP66088", - "BodyPartExamined": "HEAD", - "PatientPosition": "HFS", - "ProcedureStepDescription": "NBML_Project_P-97162_KHATIBI", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-MT1", - "ProtocolName": "GRE-MT1", - "ScanningSequence": "GR", - "SequenceVariant": "MTC_SP", - "ScanOptions": "MT", - "SequenceName": "_fl3d1", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "DIS2D"], - "SeriesNumber": 7, - "AcquisitionTime": "18:56:58.002500", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SAR": 1.02364, - "EchoTime": 0.00313, - "RepetitionTime": 0.035, - "FlipAngle": 9, - "PartialFourier": 1, - "BaseResolution": 256, - "ShimSetting": [ - 2635, - -4508, - -3652, - -1668, - 229, - 2352, - -645, - 372 ], - "TxRefAmp": 369.736, - "PhaseResolution": 1, - "ReceiveCoilName": "Spine_32", - "ReceiveCoilActiveElements": "HC4-7;NC1,2;SP1", - "PulseSequenceDetails": "%SiemensSeq%_gre", - "ConsistencyInfo": "N4_VE11B_LATEST_20150530", - "PercentPhaseFOV": 100, - "PhaseEncodingSteps": 255, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 256, - "ParallelReductionFactorInPlane": 2, - "PixelBandwidth": 260, - "DwellTime": 7.5e-06, - "ImageOrientationPatientDICOM": [ - 1, - 0, - 0, - 0, - 1, - 0 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 GCC5.3.1" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma", + "InstitutionName": "National_Brain_Mappin_Lab.", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "Street_StreetNo_City_District_IR_ZIP", + "DeviceSerialNumber": "66088", + "StationName": "AWP66088", + "BodyPartExamined": "HEAD", + "PatientPosition": "HFS", + "ProcedureStepDescription": "NBML_Project_P-97162_KHATIBI", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-MT1", + "ProtocolName": "GRE-MT1", + "ScanningSequence": "GR", + "SequenceVariant": "MTC_SP", + "ScanOptions": "MT", + "SequenceName": "_fl3d1", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "DIS2D" + ], + "SeriesNumber": 7, + "AcquisitionTime": "18:56:58.002500", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SAR": 1.02364, + "EchoTime": 0.00313, + "RepetitionTime": 0.035, + "FlipAngle": 9, + "PartialFourier": 1, + "BaseResolution": 256, + "ShimSetting": [ + 2635, + -4508, + -3652, + -1668, + 229, + 2352, + -645, + 372 + ], + "TxRefAmp": 369.736, + "PhaseResolution": 1, + "ReceiveCoilName": "Spine_32", + "ReceiveCoilActiveElements": "HC4-7;NC1,2;SP1", + "PulseSequenceDetails": "%SiemensSeq%_gre", + "ConsistencyInfo": "N4_VE11B_LATEST_20150530", + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 255, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "ParallelReductionFactorInPlane": 2, + "PixelBandwidth": 260, + "DwellTime": 7.5e-06, + "ImageOrientationPatientDICOM": [ + 1, + 0, + 0, + 0, + 1, + 0 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 GCC5.3.1", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-tehranS05/anat/sub-tehranS05_flip-2_mt-off_space-other_MTS.json b/derivatives/data_preprocessed/sub-tehranS05/anat/sub-tehranS05_flip-2_mt-off_space-other_MTS.json index ce38c9234f..1b79e394cf 100644 --- a/derivatives/data_preprocessed/sub-tehranS05/anat/sub-tehranS05_flip-2_mt-off_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-tehranS05/anat/sub-tehranS05_flip-2_mt-off_space-other_MTS.json @@ -1,64 +1,74 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma", - "InstitutionName": "National_Brain_Mappin_Lab.", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "Street_StreetNo_City_District_IR_ZIP", - "DeviceSerialNumber": "66088", - "StationName": "AWP66088", - "BodyPartExamined": "HEAD", - "PatientPosition": "HFS", - "ProcedureStepDescription": "NBML_Project_P-97162_KHATIBI", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-T1w", - "ProtocolName": "GRE-T1w", - "ScanningSequence": "GR", - "SequenceVariant": "SP", - "SequenceName": "_fl3d1", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "DIS2D"], - "SeriesNumber": 10, - "AcquisitionTime": "19:06:33.060000", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SAR": 0.0663699, - "EchoTime": 0.00313, - "RepetitionTime": 0.015, - "FlipAngle": 15, - "PartialFourier": 1, - "BaseResolution": 256, - "ShimSetting": [ - 2643, - -4534, - -3661, - -1755, - 84, - 2293, - -937, - 353 ], - "TxRefAmp": 369.736, - "PhaseResolution": 1, - "ReceiveCoilName": "Spine_32", - "ReceiveCoilActiveElements": "HC3-7;NC1,2;SP1", - "PulseSequenceDetails": "%SiemensSeq%_gre", - "ConsistencyInfo": "N4_VE11B_LATEST_20150530", - "PercentPhaseFOV": 100, - "PhaseEncodingSteps": 255, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 256, - "ParallelReductionFactorInPlane": 2, - "PixelBandwidth": 260, - "DwellTime": 7.5e-06, - "ImageOrientationPatientDICOM": [ - 1, - 0, - 0, - 0, - 1, - 0 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 GCC5.3.1" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma", + "InstitutionName": "National_Brain_Mappin_Lab.", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "Street_StreetNo_City_District_IR_ZIP", + "DeviceSerialNumber": "66088", + "StationName": "AWP66088", + "BodyPartExamined": "HEAD", + "PatientPosition": "HFS", + "ProcedureStepDescription": "NBML_Project_P-97162_KHATIBI", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-T1w", + "ProtocolName": "GRE-T1w", + "ScanningSequence": "GR", + "SequenceVariant": "SP", + "SequenceName": "_fl3d1", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "DIS2D" + ], + "SeriesNumber": 10, + "AcquisitionTime": "19:06:33.060000", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SAR": 0.0663699, + "EchoTime": 0.00313, + "RepetitionTime": 0.015, + "FlipAngle": 15, + "PartialFourier": 1, + "BaseResolution": 256, + "ShimSetting": [ + 2643, + -4534, + -3661, + -1755, + 84, + 2293, + -937, + 353 + ], + "TxRefAmp": 369.736, + "PhaseResolution": 1, + "ReceiveCoilName": "Spine_32", + "ReceiveCoilActiveElements": "HC3-7;NC1,2;SP1", + "PulseSequenceDetails": "%SiemensSeq%_gre", + "ConsistencyInfo": "N4_VE11B_LATEST_20150530", + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 255, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "ParallelReductionFactorInPlane": 2, + "PixelBandwidth": 260, + "DwellTime": 7.5e-06, + "ImageOrientationPatientDICOM": [ + 1, + 0, + 0, + 0, + 1, + 0 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 GCC5.3.1", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-tehranS05/anat/sub-tehranS05_space-other_T1w.json b/derivatives/data_preprocessed/sub-tehranS05/anat/sub-tehranS05_space-other_T1w.json index a063902be4..28253924e6 100644 --- a/derivatives/data_preprocessed/sub-tehranS05/anat/sub-tehranS05_space-other_T1w.json +++ b/derivatives/data_preprocessed/sub-tehranS05/anat/sub-tehranS05_space-other_T1w.json @@ -1,66 +1,79 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma", - "InstitutionName": "National_Brain_Mappin_Lab.", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "Street_StreetNo_City_District_IR_ZIP", - "DeviceSerialNumber": "66088", - "StationName": "AWP66088", - "BodyPartExamined": "HEAD", - "PatientPosition": "HFS", - "ProcedureStepDescription": "NBML_Project_P-97162_KHATIBI", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "T1w", - "ProtocolName": "T1w", - "ScanningSequence": "GR_IR", - "SequenceVariant": "SK_SP_MP", - "ScanOptions": "IR", - "SequenceName": "_tfl3d1_16", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS3D", "DIS2D"], - "SeriesNumber": 4, - "AcquisitionTime": "18:42:35.400000", - "AcquisitionNumber": 1, - "SliceThickness": 1, - "SAR": 0.0926883, - "EchoTime": 0.00372, - "RepetitionTime": 2, - "InversionTime": 1, - "FlipAngle": 9, - "PartialFourier": 1, - "BaseResolution": 320, - "ShimSetting": [ - 2604, - -4469, - -3523, - 64, - -4, - 77, - -23, - -9 ], - "TxRefAmp": 302.943, - "PhaseResolution": 1, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC1,3-7;NC1,2;SP1", - "PulseSequenceDetails": "%SiemensSeq%_tfl", - "ConsistencyInfo": "N4_VE11B_LATEST_20150530", - "PercentPhaseFOV": 81.25, - "PhaseEncodingSteps": 259, - "AcquisitionMatrixPE": 260, - "ReconMatrixPE": 320, - "ParallelReductionFactorInPlane": 2, - "PixelBandwidth": 150, - "DwellTime": 1.04e-05, - "ImageOrientationPatientDICOM": [ - 0, - 1, - 0, - 0, - 0, - -1 ], - "InPlanePhaseEncodingDirectionDICOM": "ROW", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 GCC5.3.1" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma", + "InstitutionName": "National_Brain_Mappin_Lab.", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "Street_StreetNo_City_District_IR_ZIP", + "DeviceSerialNumber": "66088", + "StationName": "AWP66088", + "BodyPartExamined": "HEAD", + "PatientPosition": "HFS", + "ProcedureStepDescription": "NBML_Project_P-97162_KHATIBI", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "T1w", + "ProtocolName": "T1w", + "ScanningSequence": "GR_IR", + "SequenceVariant": "SK_SP_MP", + "ScanOptions": "IR", + "SequenceName": "_tfl3d1_16", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS3D", + "DIS2D" + ], + "SeriesNumber": 4, + "AcquisitionTime": "18:42:35.400000", + "AcquisitionNumber": 1, + "SliceThickness": 1, + "SAR": 0.0926883, + "EchoTime": 0.00372, + "RepetitionTime": 2, + "InversionTime": 1, + "FlipAngle": 9, + "PartialFourier": 1, + "BaseResolution": 320, + "ShimSetting": [ + 2604, + -4469, + -3523, + 64, + -4, + 77, + -23, + -9 + ], + "TxRefAmp": 302.943, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC1,3-7;NC1,2;SP1", + "PulseSequenceDetails": "%SiemensSeq%_tfl", + "ConsistencyInfo": "N4_VE11B_LATEST_20150530", + "PercentPhaseFOV": 81.25, + "PhaseEncodingSteps": 259, + "AcquisitionMatrixPE": 260, + "ReconMatrixPE": 320, + "ParallelReductionFactorInPlane": 2, + "PixelBandwidth": 150, + "DwellTime": 1.04e-05, + "ImageOrientationPatientDICOM": [ + 0, + 1, + 0, + 0, + 0, + -1 + ], + "InPlanePhaseEncodingDirectionDICOM": "ROW", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 GCC5.3.1", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-tehranS05/anat/sub-tehranS05_space-other_T2star.json b/derivatives/data_preprocessed/sub-tehranS05/anat/sub-tehranS05_space-other_T2star.json index 430080d0db..905d13bf73 100644 --- a/derivatives/data_preprocessed/sub-tehranS05/anat/sub-tehranS05_space-other_T2star.json +++ b/derivatives/data_preprocessed/sub-tehranS05/anat/sub-tehranS05_space-other_T2star.json @@ -73,5 +73,9 @@ "InPlanePhaseEncodingDirectionDICOM": "COL", "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20180622 GCC5.3.1", - "AcquisitionDuration": 285.0 + "AcquisitionDuration": 285.0, + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-tehranS05/anat/sub-tehranS05_space-other_T2w.json b/derivatives/data_preprocessed/sub-tehranS05/anat/sub-tehranS05_space-other_T2w.json index b7206e379c..12543773bc 100644 --- a/derivatives/data_preprocessed/sub-tehranS05/anat/sub-tehranS05_space-other_T2w.json +++ b/derivatives/data_preprocessed/sub-tehranS05/anat/sub-tehranS05_space-other_T2w.json @@ -1,67 +1,80 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma", - "InstitutionName": "National_Brain_Mappin_Lab.", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "Street_StreetNo_City_District_IR_ZIP", - "DeviceSerialNumber": "66088", - "StationName": "AWP66088", - "BodyPartExamined": "HEAD", - "PatientPosition": "HFS", - "ProcedureStepDescription": "NBML_Project_P-97162_KHATIBI", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "T2w", - "ProtocolName": "T2w", - "ScanningSequence": "SE", - "SequenceVariant": "SK_SP_OSP", - "ScanOptions": "PFP", - "SequenceName": "_spcR_100", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS3D", "DIS2D"], - "SeriesNumber": 5, - "AcquisitionTime": "18:48:27.017500", - "AcquisitionNumber": 1, - "SliceThickness": 0.8, - "SAR": 0.926187, - "EchoTime": 0.12, - "RepetitionTime": 1.5, - "FlipAngle": 120, - "PartialFourier": 1, - "BaseResolution": 320, - "ShimSetting": [ - 2604, - -4469, - -3523, - 64, - -4, - 77, - -23, - -9 ], - "TxRefAmp": 350.614, - "PhaseResolution": 1, - "PhaseOversampling": 0.8, - "ReceiveCoilName": "Spine_32", - "ReceiveCoilActiveElements": "HC3-7;NC1,2;SP1", - "PulseSequenceDetails": "%SiemensSeq%_tse_vfl", - "ConsistencyInfo": "N4_VE11B_LATEST_20150530", - "PercentPhaseFOV": 100, - "EchoTrainLength": 76, - "PhaseEncodingSteps": 422, - "AcquisitionMatrixPE": 320, - "ReconMatrixPE": 320, - "ParallelReductionFactorInPlane": 3, - "PixelBandwidth": 625, - "DwellTime": 2.5e-06, - "ImageOrientationPatientDICOM": [ - 7.9547e-05, - 1, - 7.741e-12, - -0.0157017, - 1.24903e-06, - -0.999877 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 GCC5.3.1" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma", + "InstitutionName": "National_Brain_Mappin_Lab.", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "Street_StreetNo_City_District_IR_ZIP", + "DeviceSerialNumber": "66088", + "StationName": "AWP66088", + "BodyPartExamined": "HEAD", + "PatientPosition": "HFS", + "ProcedureStepDescription": "NBML_Project_P-97162_KHATIBI", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "T2w", + "ProtocolName": "T2w", + "ScanningSequence": "SE", + "SequenceVariant": "SK_SP_OSP", + "ScanOptions": "PFP", + "SequenceName": "_spcR_100", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS3D", + "DIS2D" + ], + "SeriesNumber": 5, + "AcquisitionTime": "18:48:27.017500", + "AcquisitionNumber": 1, + "SliceThickness": 0.8, + "SAR": 0.926187, + "EchoTime": 0.12, + "RepetitionTime": 1.5, + "FlipAngle": 120, + "PartialFourier": 1, + "BaseResolution": 320, + "ShimSetting": [ + 2604, + -4469, + -3523, + 64, + -4, + 77, + -23, + -9 + ], + "TxRefAmp": 350.614, + "PhaseResolution": 1, + "PhaseOversampling": 0.8, + "ReceiveCoilName": "Spine_32", + "ReceiveCoilActiveElements": "HC3-7;NC1,2;SP1", + "PulseSequenceDetails": "%SiemensSeq%_tse_vfl", + "ConsistencyInfo": "N4_VE11B_LATEST_20150530", + "PercentPhaseFOV": 100, + "EchoTrainLength": 76, + "PhaseEncodingSteps": 422, + "AcquisitionMatrixPE": 320, + "ReconMatrixPE": 320, + "ParallelReductionFactorInPlane": 3, + "PixelBandwidth": 625, + "DwellTime": 2.5e-06, + "ImageOrientationPatientDICOM": [ + 7.9547e-05, + 1, + 7.741e-12, + -0.0157017, + 1.24903e-06, + -0.999877 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 GCC5.3.1", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-tehranS06/anat/sub-tehranS06_flip-1_mt-on_space-other_MTS.json b/derivatives/data_preprocessed/sub-tehranS06/anat/sub-tehranS06_flip-1_mt-on_space-other_MTS.json index 44574bcffe..54236331c5 100644 --- a/derivatives/data_preprocessed/sub-tehranS06/anat/sub-tehranS06_flip-1_mt-on_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-tehranS06/anat/sub-tehranS06_flip-1_mt-on_space-other_MTS.json @@ -1,65 +1,75 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma", - "InstitutionName": "National_Brain_Mappin_Lab.", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "Street_StreetNo_City_District_IR_ZIP", - "DeviceSerialNumber": "66088", - "StationName": "AWP66088", - "BodyPartExamined": "HEAD", - "PatientPosition": "HFS", - "ProcedureStepDescription": "NBML_Project_Khatibi", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-MT1", - "ProtocolName": "GRE-MT1", - "ScanningSequence": "GR", - "SequenceVariant": "MTC_SP", - "ScanOptions": "MT", - "SequenceName": "_fl3d1", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "DIS2D"], - "SeriesNumber": 7, - "AcquisitionTime": "16:21:6.947500", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SAR": 0.732337, - "EchoTime": 0.00313, - "RepetitionTime": 0.035, - "FlipAngle": 9, - "PartialFourier": 1, - "BaseResolution": 256, - "ShimSetting": [ - 2566, - -4610, - -3593, - -1981, - -610, - 851, - -1161, - 94 ], - "TxRefAmp": 318.808, - "PhaseResolution": 1, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC7;NC1,2", - "PulseSequenceDetails": "%SiemensSeq%_gre", - "ConsistencyInfo": "N4_VE11B_LATEST_20150530", - "PercentPhaseFOV": 100, - "PhaseEncodingSteps": 255, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 256, - "ParallelReductionFactorInPlane": 2, - "PixelBandwidth": 260, - "DwellTime": 7.5e-06, - "ImageOrientationPatientDICOM": [ - 0.997061, - 0.00496325, - 0.0764562, - 5.95403e-08, - 0.9979, - -0.0647806 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 GCC5.3.1" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma", + "InstitutionName": "National_Brain_Mappin_Lab.", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "Street_StreetNo_City_District_IR_ZIP", + "DeviceSerialNumber": "66088", + "StationName": "AWP66088", + "BodyPartExamined": "HEAD", + "PatientPosition": "HFS", + "ProcedureStepDescription": "NBML_Project_Khatibi", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-MT1", + "ProtocolName": "GRE-MT1", + "ScanningSequence": "GR", + "SequenceVariant": "MTC_SP", + "ScanOptions": "MT", + "SequenceName": "_fl3d1", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "DIS2D" + ], + "SeriesNumber": 7, + "AcquisitionTime": "16:21:6.947500", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SAR": 0.732337, + "EchoTime": 0.00313, + "RepetitionTime": 0.035, + "FlipAngle": 9, + "PartialFourier": 1, + "BaseResolution": 256, + "ShimSetting": [ + 2566, + -4610, + -3593, + -1981, + -610, + 851, + -1161, + 94 + ], + "TxRefAmp": 318.808, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC7;NC1,2", + "PulseSequenceDetails": "%SiemensSeq%_gre", + "ConsistencyInfo": "N4_VE11B_LATEST_20150530", + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 255, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "ParallelReductionFactorInPlane": 2, + "PixelBandwidth": 260, + "DwellTime": 7.5e-06, + "ImageOrientationPatientDICOM": [ + 0.997061, + 0.00496325, + 0.0764562, + 5.95403e-08, + 0.9979, + -0.0647806 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 GCC5.3.1", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-tehranS06/anat/sub-tehranS06_flip-2_mt-off_space-other_MTS.json b/derivatives/data_preprocessed/sub-tehranS06/anat/sub-tehranS06_flip-2_mt-off_space-other_MTS.json index b596ab2d12..9a1fd8a986 100644 --- a/derivatives/data_preprocessed/sub-tehranS06/anat/sub-tehranS06_flip-2_mt-off_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-tehranS06/anat/sub-tehranS06_flip-2_mt-off_space-other_MTS.json @@ -1,64 +1,74 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma", - "InstitutionName": "National_Brain_Mappin_Lab.", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "Street_StreetNo_City_District_IR_ZIP", - "DeviceSerialNumber": "66088", - "StationName": "AWP66088", - "BodyPartExamined": "HEAD", - "PatientPosition": "HFS", - "ProcedureStepDescription": "NBML_Project_Khatibi", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-T1w", - "ProtocolName": "GRE-T1w", - "ScanningSequence": "GR", - "SequenceVariant": "SP", - "SequenceName": "_fl3d1", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "DIS2D"], - "SeriesNumber": 10, - "AcquisitionTime": "16:30:33.902500", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SAR": 0.0474825, - "EchoTime": 0.00313, - "RepetitionTime": 0.015, - "FlipAngle": 15, - "PartialFourier": 1, - "BaseResolution": 256, - "ShimSetting": [ - 2515, - -4580, - -3563, - -2156, - -571, - 1068, - -533, - -165 ], - "TxRefAmp": 318.808, - "PhaseResolution": 1, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC7;NC1,2", - "PulseSequenceDetails": "%SiemensSeq%_gre", - "ConsistencyInfo": "N4_VE11B_LATEST_20150530", - "PercentPhaseFOV": 100, - "PhaseEncodingSteps": 255, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 256, - "ParallelReductionFactorInPlane": 2, - "PixelBandwidth": 260, - "DwellTime": 7.5e-06, - "ImageOrientationPatientDICOM": [ - 0.997061, - 0.00496325, - 0.0764562, - 5.95403e-08, - 0.9979, - -0.0647806 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 GCC5.3.1" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma", + "InstitutionName": "National_Brain_Mappin_Lab.", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "Street_StreetNo_City_District_IR_ZIP", + "DeviceSerialNumber": "66088", + "StationName": "AWP66088", + "BodyPartExamined": "HEAD", + "PatientPosition": "HFS", + "ProcedureStepDescription": "NBML_Project_Khatibi", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-T1w", + "ProtocolName": "GRE-T1w", + "ScanningSequence": "GR", + "SequenceVariant": "SP", + "SequenceName": "_fl3d1", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "DIS2D" + ], + "SeriesNumber": 10, + "AcquisitionTime": "16:30:33.902500", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SAR": 0.0474825, + "EchoTime": 0.00313, + "RepetitionTime": 0.015, + "FlipAngle": 15, + "PartialFourier": 1, + "BaseResolution": 256, + "ShimSetting": [ + 2515, + -4580, + -3563, + -2156, + -571, + 1068, + -533, + -165 + ], + "TxRefAmp": 318.808, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC7;NC1,2", + "PulseSequenceDetails": "%SiemensSeq%_gre", + "ConsistencyInfo": "N4_VE11B_LATEST_20150530", + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 255, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "ParallelReductionFactorInPlane": 2, + "PixelBandwidth": 260, + "DwellTime": 7.5e-06, + "ImageOrientationPatientDICOM": [ + 0.997061, + 0.00496325, + 0.0764562, + 5.95403e-08, + 0.9979, + -0.0647806 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 GCC5.3.1", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-tehranS06/anat/sub-tehranS06_space-other_T1w.json b/derivatives/data_preprocessed/sub-tehranS06/anat/sub-tehranS06_space-other_T1w.json index 90c96ea8cd..38a7904770 100644 --- a/derivatives/data_preprocessed/sub-tehranS06/anat/sub-tehranS06_space-other_T1w.json +++ b/derivatives/data_preprocessed/sub-tehranS06/anat/sub-tehranS06_space-other_T1w.json @@ -1,66 +1,79 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma", - "InstitutionName": "National_Brain_Mappin_Lab.", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "Street_StreetNo_City_District_IR_ZIP", - "DeviceSerialNumber": "66088", - "StationName": "AWP66088", - "BodyPartExamined": "HEAD", - "PatientPosition": "HFS", - "ProcedureStepDescription": "NBML_Project_Khatibi", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "T1w", - "ProtocolName": "T1w", - "ScanningSequence": "GR_IR", - "SequenceVariant": "SK_SP_MP", - "ScanOptions": "IR", - "SequenceName": "_tfl3d1_16", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS3D", "DIS2D"], - "SeriesNumber": 4, - "AcquisitionTime": "16:08:27.022500", - "AcquisitionNumber": 1, - "SliceThickness": 1, - "SAR": 0.0913447, - "EchoTime": 0.00372, - "RepetitionTime": 2, - "InversionTime": 1, - "FlipAngle": 9, - "PartialFourier": 1, - "BaseResolution": 320, - "ShimSetting": [ - 2604, - -4469, - -3523, - 64, - -4, - 77, - -23, - -9 ], - "TxRefAmp": 313.494, - "PhaseResolution": 1, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC1-7;NC1,2", - "PulseSequenceDetails": "%SiemensSeq%_tfl", - "ConsistencyInfo": "N4_VE11B_LATEST_20150530", - "PercentPhaseFOV": 81.25, - "PhaseEncodingSteps": 259, - "AcquisitionMatrixPE": 260, - "ReconMatrixPE": 320, - "ParallelReductionFactorInPlane": 2, - "PixelBandwidth": 150, - "DwellTime": 1.04e-05, - "ImageOrientationPatientDICOM": [ - 0, - 1, - 0, - 0.0784591, - 0, - -0.996917 ], - "InPlanePhaseEncodingDirectionDICOM": "ROW", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 GCC5.3.1" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma", + "InstitutionName": "National_Brain_Mappin_Lab.", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "Street_StreetNo_City_District_IR_ZIP", + "DeviceSerialNumber": "66088", + "StationName": "AWP66088", + "BodyPartExamined": "HEAD", + "PatientPosition": "HFS", + "ProcedureStepDescription": "NBML_Project_Khatibi", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "T1w", + "ProtocolName": "T1w", + "ScanningSequence": "GR_IR", + "SequenceVariant": "SK_SP_MP", + "ScanOptions": "IR", + "SequenceName": "_tfl3d1_16", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS3D", + "DIS2D" + ], + "SeriesNumber": 4, + "AcquisitionTime": "16:08:27.022500", + "AcquisitionNumber": 1, + "SliceThickness": 1, + "SAR": 0.0913447, + "EchoTime": 0.00372, + "RepetitionTime": 2, + "InversionTime": 1, + "FlipAngle": 9, + "PartialFourier": 1, + "BaseResolution": 320, + "ShimSetting": [ + 2604, + -4469, + -3523, + 64, + -4, + 77, + -23, + -9 + ], + "TxRefAmp": 313.494, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC1-7;NC1,2", + "PulseSequenceDetails": "%SiemensSeq%_tfl", + "ConsistencyInfo": "N4_VE11B_LATEST_20150530", + "PercentPhaseFOV": 81.25, + "PhaseEncodingSteps": 259, + "AcquisitionMatrixPE": 260, + "ReconMatrixPE": 320, + "ParallelReductionFactorInPlane": 2, + "PixelBandwidth": 150, + "DwellTime": 1.04e-05, + "ImageOrientationPatientDICOM": [ + 0, + 1, + 0, + 0.0784591, + 0, + -0.996917 + ], + "InPlanePhaseEncodingDirectionDICOM": "ROW", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 GCC5.3.1", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-tehranS06/anat/sub-tehranS06_space-other_T2star.json b/derivatives/data_preprocessed/sub-tehranS06/anat/sub-tehranS06_space-other_T2star.json index e12e17cffe..1b714f5b8f 100644 --- a/derivatives/data_preprocessed/sub-tehranS06/anat/sub-tehranS06_space-other_T2star.json +++ b/derivatives/data_preprocessed/sub-tehranS06/anat/sub-tehranS06_space-other_T2star.json @@ -73,5 +73,9 @@ "InPlanePhaseEncodingDirectionDICOM": "COL", "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20180622 GCC5.3.1", - "AcquisitionDuration": 285.0 + "AcquisitionDuration": 285.0, + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-tehranS06/anat/sub-tehranS06_space-other_T2w.json b/derivatives/data_preprocessed/sub-tehranS06/anat/sub-tehranS06_space-other_T2w.json index 8003321d36..e5b241867f 100644 --- a/derivatives/data_preprocessed/sub-tehranS06/anat/sub-tehranS06_space-other_T2w.json +++ b/derivatives/data_preprocessed/sub-tehranS06/anat/sub-tehranS06_space-other_T2w.json @@ -1,67 +1,80 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma", - "InstitutionName": "National_Brain_Mappin_Lab.", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "Street_StreetNo_City_District_IR_ZIP", - "DeviceSerialNumber": "66088", - "StationName": "AWP66088", - "BodyPartExamined": "HEAD", - "PatientPosition": "HFS", - "ProcedureStepDescription": "NBML_Project_Khatibi", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "T2w", - "ProtocolName": "T2w", - "ScanningSequence": "SE", - "SequenceVariant": "SK_SP_OSP", - "ScanOptions": "PFP", - "SequenceName": "_spcR_100", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS3D", "DIS2D"], - "SeriesNumber": 5, - "AcquisitionTime": "16:13:30.900000", - "AcquisitionNumber": 1, - "SliceThickness": 0.8, - "SAR": 0.744475, - "EchoTime": 0.12, - "RepetitionTime": 1.5, - "FlipAngle": 120, - "PartialFourier": 1, - "BaseResolution": 320, - "ShimSetting": [ - 2604, - -4469, - -3523, - 64, - -4, - 77, - -23, - -9 ], - "TxRefAmp": 321.807, - "PhaseResolution": 1, - "PhaseOversampling": 0.8, - "ReceiveCoilName": "Spine_32", - "ReceiveCoilActiveElements": "HC5-7;NC1,2;SP1", - "PulseSequenceDetails": "%SiemensSeq%_tse_vfl", - "ConsistencyInfo": "N4_VE11B_LATEST_20150530", - "PercentPhaseFOV": 100, - "EchoTrainLength": 76, - "PhaseEncodingSteps": 422, - "AcquisitionMatrixPE": 320, - "ReconMatrixPE": 320, - "ParallelReductionFactorInPlane": 3, - "PixelBandwidth": 625, - "DwellTime": 2.5e-06, - "ImageOrientationPatientDICOM": [ - 0.000855378, - 1, - 8.701e-12, - 0.0680445, - -5.82037e-05, - -0.997682 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 GCC5.3.1" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma", + "InstitutionName": "National_Brain_Mappin_Lab.", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "Street_StreetNo_City_District_IR_ZIP", + "DeviceSerialNumber": "66088", + "StationName": "AWP66088", + "BodyPartExamined": "HEAD", + "PatientPosition": "HFS", + "ProcedureStepDescription": "NBML_Project_Khatibi", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "T2w", + "ProtocolName": "T2w", + "ScanningSequence": "SE", + "SequenceVariant": "SK_SP_OSP", + "ScanOptions": "PFP", + "SequenceName": "_spcR_100", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS3D", + "DIS2D" + ], + "SeriesNumber": 5, + "AcquisitionTime": "16:13:30.900000", + "AcquisitionNumber": 1, + "SliceThickness": 0.8, + "SAR": 0.744475, + "EchoTime": 0.12, + "RepetitionTime": 1.5, + "FlipAngle": 120, + "PartialFourier": 1, + "BaseResolution": 320, + "ShimSetting": [ + 2604, + -4469, + -3523, + 64, + -4, + 77, + -23, + -9 + ], + "TxRefAmp": 321.807, + "PhaseResolution": 1, + "PhaseOversampling": 0.8, + "ReceiveCoilName": "Spine_32", + "ReceiveCoilActiveElements": "HC5-7;NC1,2;SP1", + "PulseSequenceDetails": "%SiemensSeq%_tse_vfl", + "ConsistencyInfo": "N4_VE11B_LATEST_20150530", + "PercentPhaseFOV": 100, + "EchoTrainLength": 76, + "PhaseEncodingSteps": 422, + "AcquisitionMatrixPE": 320, + "ReconMatrixPE": 320, + "ParallelReductionFactorInPlane": 3, + "PixelBandwidth": 625, + "DwellTime": 2.5e-06, + "ImageOrientationPatientDICOM": [ + 0.000855378, + 1, + 8.701e-12, + 0.0680445, + -5.82037e-05, + -0.997682 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 GCC5.3.1", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-tokyo750w01/anat/sub-tokyo750w01_flip-1_mt-on_space-other_MTS.json b/derivatives/data_preprocessed/sub-tokyo750w01/anat/sub-tokyo750w01_flip-1_mt-on_space-other_MTS.json index da8e779a11..e1e0dd3569 100644 --- a/derivatives/data_preprocessed/sub-tokyo750w01/anat/sub-tokyo750w01_flip-1_mt-on_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-tokyo750w01/anat/sub-tokyo750w01_flip-1_mt-on_space-other_MTS.json @@ -1,43 +1,51 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 127.771, - "Manufacturer": "GE", - "ManufacturersModelName": "DISCOVERY_MR750w", - "InstitutionName": "TOKYO_UNIV_HOSPITAL", - "DeviceSerialNumber": "0000000000EM0204", - "StationName": "MRX07", - "PatientPosition": "HFS", - "SoftwareVersions": "24_LX_MR_Software_release:DV24.0_R01_1344.a", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-MT1", - "ProtocolName": "GRE-MT1", - "ScanningSequence": "GR", - "SequenceVariant": "SS_SP", - "ScanOptions": "EDR_GEMS_MT_GEMS_FILTERED_GEMS_PFF", - "ImageType": ["ORIGINAL", "PRIMARY", "OTHER"], - "SeriesNumber": 12, - "AcquisitionTime": "19:29:29.000000", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SpacingBetweenSlices": 5, - "SAR": 1.29104, - "EchoTime": 0.004, - "RepetitionTime": 0.035, - "FlipAngle": 9, - "CoilString": "Head+Neck_40", - "PercentPhaseFOV": 100, - "AcquisitionMatrixPE": 192, - "ReconMatrixPE": 230, - "PixelBandwidth": 362.348, - "ImageOrientationPatientDICOM": [ - 0.99892, - 0.00209588, - 0.046415, - -0.0048463, - 0.998233, - 0.0592256 ], - "InPlanePhaseEncodingDirectionDICOM": "ROW", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 127.771, + "Manufacturer": "GE", + "ManufacturersModelName": "DISCOVERY_MR750w", + "InstitutionName": "TOKYO_UNIV_HOSPITAL", + "DeviceSerialNumber": "0000000000EM0204", + "StationName": "MRX07", + "PatientPosition": "HFS", + "SoftwareVersions": "24_LX_MR_Software_release:DV24.0_R01_1344.a", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-MT1", + "ProtocolName": "GRE-MT1", + "ScanningSequence": "GR", + "SequenceVariant": "SS_SP", + "ScanOptions": "EDR_GEMS_MT_GEMS_FILTERED_GEMS_PFF", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "OTHER" + ], + "SeriesNumber": 12, + "AcquisitionTime": "19:29:29.000000", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SpacingBetweenSlices": 5, + "SAR": 1.29104, + "EchoTime": 0.004, + "RepetitionTime": 0.035, + "FlipAngle": 9, + "CoilString": "Head+Neck_40", + "PercentPhaseFOV": 100, + "AcquisitionMatrixPE": 192, + "ReconMatrixPE": 230, + "PixelBandwidth": 362.348, + "ImageOrientationPatientDICOM": [ + 0.99892, + 0.00209588, + 0.046415, + -0.0048463, + 0.998233, + 0.0592256 + ], + "InPlanePhaseEncodingDirectionDICOM": "ROW", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-tokyo750w01/anat/sub-tokyo750w01_flip-2_mt-off_space-other_MTS.json b/derivatives/data_preprocessed/sub-tokyo750w01/anat/sub-tokyo750w01_flip-2_mt-off_space-other_MTS.json index 3ce63bfc78..b56d2ebf81 100644 --- a/derivatives/data_preprocessed/sub-tokyo750w01/anat/sub-tokyo750w01_flip-2_mt-off_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-tokyo750w01/anat/sub-tokyo750w01_flip-2_mt-off_space-other_MTS.json @@ -1,43 +1,51 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 127.771, - "Manufacturer": "GE", - "ManufacturersModelName": "DISCOVERY_MR750w", - "InstitutionName": "TOKYO_UNIV_HOSPITAL", - "DeviceSerialNumber": "0000000000EM0204", - "StationName": "MRX07", - "PatientPosition": "HFS", - "SoftwareVersions": "24_LX_MR_Software_release:DV24.0_R01_1344.a", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-T1w", - "ProtocolName": "GRE-T1w", - "ScanningSequence": "GR", - "SequenceVariant": "SS_SP", - "ScanOptions": "EDR_GEMS_FILTERED_GEMS_PFF", - "ImageType": ["ORIGINAL", "PRIMARY", "OTHER"], - "SeriesNumber": 9, - "AcquisitionTime": "19:17:20.000000", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SpacingBetweenSlices": 5, - "SAR": 0.0206288, - "EchoTime": 0.004, - "RepetitionTime": 0.015, - "FlipAngle": 15, - "CoilString": "Head+Neck_40", - "PercentPhaseFOV": 100, - "AcquisitionMatrixPE": 192, - "ReconMatrixPE": 230, - "PixelBandwidth": 362.348, - "ImageOrientationPatientDICOM": [ - 0.99892, - 0.00209588, - 0.046415, - -0.0048463, - 0.998233, - 0.0592256 ], - "InPlanePhaseEncodingDirectionDICOM": "ROW", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 127.771, + "Manufacturer": "GE", + "ManufacturersModelName": "DISCOVERY_MR750w", + "InstitutionName": "TOKYO_UNIV_HOSPITAL", + "DeviceSerialNumber": "0000000000EM0204", + "StationName": "MRX07", + "PatientPosition": "HFS", + "SoftwareVersions": "24_LX_MR_Software_release:DV24.0_R01_1344.a", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-T1w", + "ProtocolName": "GRE-T1w", + "ScanningSequence": "GR", + "SequenceVariant": "SS_SP", + "ScanOptions": "EDR_GEMS_FILTERED_GEMS_PFF", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "OTHER" + ], + "SeriesNumber": 9, + "AcquisitionTime": "19:17:20.000000", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SpacingBetweenSlices": 5, + "SAR": 0.0206288, + "EchoTime": 0.004, + "RepetitionTime": 0.015, + "FlipAngle": 15, + "CoilString": "Head+Neck_40", + "PercentPhaseFOV": 100, + "AcquisitionMatrixPE": 192, + "ReconMatrixPE": 230, + "PixelBandwidth": 362.348, + "ImageOrientationPatientDICOM": [ + 0.99892, + 0.00209588, + 0.046415, + -0.0048463, + 0.998233, + 0.0592256 + ], + "InPlanePhaseEncodingDirectionDICOM": "ROW", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-tokyo750w01/anat/sub-tokyo750w01_space-other_T1w.json b/derivatives/data_preprocessed/sub-tokyo750w01/anat/sub-tokyo750w01_space-other_T1w.json index 965dd0a370..e18bf01a59 100644 --- a/derivatives/data_preprocessed/sub-tokyo750w01/anat/sub-tokyo750w01_space-other_T1w.json +++ b/derivatives/data_preprocessed/sub-tokyo750w01/anat/sub-tokyo750w01_space-other_T1w.json @@ -1,44 +1,53 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 127.771, - "Manufacturer": "GE", - "ManufacturersModelName": "DISCOVERY_MR750w", - "InstitutionName": "TOKYO_UNIV_HOSPITAL", - "DeviceSerialNumber": "0000000000EM0204", - "StationName": "MRX07", - "PatientPosition": "HFS", - "SoftwareVersions": "24_LX_MR_Software_release:DV24.0_R01_1344.a", - "MRAcquisitionType": "3D", - "SeriesDescription": "T1w", - "ProtocolName": "T1w", - "ScanningSequence": "GR", - "SequenceVariant": "SS_SP_SK", - "ScanOptions": "FAST_GEMS_EDR_GEMS_FILTERED_GEMS_ACC_GEMS", - "ImageType": ["ORIGINAL", "PRIMARY", "OTHER"], - "SeriesNumber": 4, - "AcquisitionTime": "18:46:59.000000", - "AcquisitionNumber": 1, - "SliceThickness": 1, - "SpacingBetweenSlices": 0.499999, - "SAR": 0.0942915, - "EchoTime": 0.001856, - "RepetitionTime": 0.004808, - "InversionTime": 1, - "FlipAngle": 9, - "CoilString": "Head+Neck_40", - "PercentPhaseFOV": 80, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 320, - "PixelBandwidth": 892.875, - "ImageOrientationPatientDICOM": [ - 4.61817e-05, - 0.999999, - -0.00154028, - 0.0631069, - -0.00154018, - -0.998006 ], - "InPlanePhaseEncodingDirectionDICOM": "ROW", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 127.771, + "Manufacturer": "GE", + "ManufacturersModelName": "DISCOVERY_MR750w", + "InstitutionName": "TOKYO_UNIV_HOSPITAL", + "DeviceSerialNumber": "0000000000EM0204", + "StationName": "MRX07", + "PatientPosition": "HFS", + "SoftwareVersions": "24_LX_MR_Software_release:DV24.0_R01_1344.a", + "MRAcquisitionType": "3D", + "SeriesDescription": "T1w", + "ProtocolName": "T1w", + "ScanningSequence": "GR", + "SequenceVariant": "SS_SP_SK", + "ScanOptions": "FAST_GEMS_EDR_GEMS_FILTERED_GEMS_ACC_GEMS", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "OTHER" + ], + "SeriesNumber": 4, + "AcquisitionTime": "18:46:59.000000", + "AcquisitionNumber": 1, + "SliceThickness": 1, + "SpacingBetweenSlices": 0.499999, + "SAR": 0.0942915, + "EchoTime": 0.001856, + "RepetitionTime": 0.004808, + "InversionTime": 1, + "FlipAngle": 9, + "CoilString": "Head+Neck_40", + "PercentPhaseFOV": 80, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 320, + "PixelBandwidth": 892.875, + "ImageOrientationPatientDICOM": [ + 4.61817e-05, + 0.999999, + -0.00154028, + 0.0631069, + -0.00154018, + -0.998006 + ], + "InPlanePhaseEncodingDirectionDICOM": "ROW", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-tokyo750w01/anat/sub-tokyo750w01_space-other_T2star.json b/derivatives/data_preprocessed/sub-tokyo750w01/anat/sub-tokyo750w01_space-other_T2star.json index ec97ff005e..e1900c2355 100644 --- a/derivatives/data_preprocessed/sub-tokyo750w01/anat/sub-tokyo750w01_space-other_T2star.json +++ b/derivatives/data_preprocessed/sub-tokyo750w01/anat/sub-tokyo750w01_space-other_T2star.json @@ -48,5 +48,9 @@ "InPlanePhaseEncodingDirectionDICOM": "ROW", "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0", - "AcquisitionDuration": 288.0 + "AcquisitionDuration": 288.0, + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-tokyo750w01/anat/sub-tokyo750w01_space-other_T2w.json b/derivatives/data_preprocessed/sub-tokyo750w01/anat/sub-tokyo750w01_space-other_T2w.json index 481d0d57c4..5bb0185f6a 100644 --- a/derivatives/data_preprocessed/sub-tokyo750w01/anat/sub-tokyo750w01_space-other_T2w.json +++ b/derivatives/data_preprocessed/sub-tokyo750w01/anat/sub-tokyo750w01_space-other_T2w.json @@ -1,44 +1,53 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 127.771, - "Manufacturer": "GE", - "ManufacturersModelName": "DISCOVERY_MR750w", - "InstitutionName": "TOKYO_UNIV_HOSPITAL", - "DeviceSerialNumber": "0000000000EM0204", - "StationName": "MRX07", - "PatientPosition": "HFS", - "SoftwareVersions": "24_LX_MR_Software_release:DV24.0_R01_1344.a", - "MRAcquisitionType": "3D", - "SeriesDescription": "T2w", - "ProtocolName": "T2w", - "ScanningSequence": "SE", - "SequenceVariant": "SK_OSP", - "ScanOptions": "FC_FREQ_AX_GEMS_FC_NPW_EDR_GEMS_FILTERED_GEMS_ACC_GEMS", - "ImageType": ["ORIGINAL", "PRIMARY", "OTHER"], - "SeriesNumber": 5, - "AcquisitionTime": "18:54:2.000000", - "AcquisitionNumber": 1, - "SliceThickness": 0.8, - "SpacingBetweenSlices": 0.8, - "SAR": 0.522791, - "EchoTime": 0.128286, - "RepetitionTime": 2.52, - "FlipAngle": 90, - "CoilString": "Head+Neck_40", - "PercentPhaseFOV": 100, - "EchoTrainLength": 78, - "AcquisitionMatrixPE": 320, - "ReconMatrixPE": 320, - "PixelBandwidth": 520.812, - "ImageOrientationPatientDICOM": [ - 8.66875e-05, - 0.999997, - -0.00232482, - 0.0432856, - -0.00232637, - -0.99906 ], - "InPlanePhaseEncodingDirectionDICOM": "ROW", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 127.771, + "Manufacturer": "GE", + "ManufacturersModelName": "DISCOVERY_MR750w", + "InstitutionName": "TOKYO_UNIV_HOSPITAL", + "DeviceSerialNumber": "0000000000EM0204", + "StationName": "MRX07", + "PatientPosition": "HFS", + "SoftwareVersions": "24_LX_MR_Software_release:DV24.0_R01_1344.a", + "MRAcquisitionType": "3D", + "SeriesDescription": "T2w", + "ProtocolName": "T2w", + "ScanningSequence": "SE", + "SequenceVariant": "SK_OSP", + "ScanOptions": "FC_FREQ_AX_GEMS_FC_NPW_EDR_GEMS_FILTERED_GEMS_ACC_GEMS", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "OTHER" + ], + "SeriesNumber": 5, + "AcquisitionTime": "18:54:2.000000", + "AcquisitionNumber": 1, + "SliceThickness": 0.8, + "SpacingBetweenSlices": 0.8, + "SAR": 0.522791, + "EchoTime": 0.128286, + "RepetitionTime": 2.52, + "FlipAngle": 90, + "CoilString": "Head+Neck_40", + "PercentPhaseFOV": 100, + "EchoTrainLength": 78, + "AcquisitionMatrixPE": 320, + "ReconMatrixPE": 320, + "PixelBandwidth": 520.812, + "ImageOrientationPatientDICOM": [ + 8.66875e-05, + 0.999997, + -0.00232482, + 0.0432856, + -0.00232637, + -0.99906 + ], + "InPlanePhaseEncodingDirectionDICOM": "ROW", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-tokyo750w02/anat/sub-tokyo750w02_flip-1_mt-on_space-other_MTS.json b/derivatives/data_preprocessed/sub-tokyo750w02/anat/sub-tokyo750w02_flip-1_mt-on_space-other_MTS.json index 273724c371..53b4347dc6 100644 --- a/derivatives/data_preprocessed/sub-tokyo750w02/anat/sub-tokyo750w02_flip-1_mt-on_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-tokyo750w02/anat/sub-tokyo750w02_flip-1_mt-on_space-other_MTS.json @@ -1,43 +1,51 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 127.771, - "Manufacturer": "GE", - "ManufacturersModelName": "DISCOVERY_MR750w", - "InstitutionName": "TOKYO_UNIV_HOSPITAL", - "DeviceSerialNumber": "0000000000EM0204", - "StationName": "MRX07", - "PatientPosition": "HFS", - "SoftwareVersions": "24_LX_MR_Software_release:DV24.0_R01_1344.a", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-MT1", - "ProtocolName": "GRE-MT1", - "ScanningSequence": "GR", - "SequenceVariant": "SS_SP", - "ScanOptions": "EDR_GEMS_MT_GEMS_FILTERED_GEMS_PFF", - "ImageType": ["ORIGINAL", "PRIMARY", "OTHER"], - "SeriesNumber": 9, - "AcquisitionTime": "19:55:34.000000", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SpacingBetweenSlices": 5, - "SAR": 1.6485, - "EchoTime": 0.004, - "RepetitionTime": 0.035, - "FlipAngle": 9, - "CoilString": "Head+Neck_40", - "PercentPhaseFOV": 100, - "AcquisitionMatrixPE": 192, - "ReconMatrixPE": 192, - "PixelBandwidth": 434.062, - "ImageOrientationPatientDICOM": [ - 0.999417, - 2.02422e-05, - 0.034151, - -0.000281053, - 0.999971, - 0.00763286 ], - "InPlanePhaseEncodingDirectionDICOM": "ROW", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 127.771, + "Manufacturer": "GE", + "ManufacturersModelName": "DISCOVERY_MR750w", + "InstitutionName": "TOKYO_UNIV_HOSPITAL", + "DeviceSerialNumber": "0000000000EM0204", + "StationName": "MRX07", + "PatientPosition": "HFS", + "SoftwareVersions": "24_LX_MR_Software_release:DV24.0_R01_1344.a", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-MT1", + "ProtocolName": "GRE-MT1", + "ScanningSequence": "GR", + "SequenceVariant": "SS_SP", + "ScanOptions": "EDR_GEMS_MT_GEMS_FILTERED_GEMS_PFF", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "OTHER" + ], + "SeriesNumber": 9, + "AcquisitionTime": "19:55:34.000000", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SpacingBetweenSlices": 5, + "SAR": 1.6485, + "EchoTime": 0.004, + "RepetitionTime": 0.035, + "FlipAngle": 9, + "CoilString": "Head+Neck_40", + "PercentPhaseFOV": 100, + "AcquisitionMatrixPE": 192, + "ReconMatrixPE": 192, + "PixelBandwidth": 434.062, + "ImageOrientationPatientDICOM": [ + 0.999417, + 2.02422e-05, + 0.034151, + -0.000281053, + 0.999971, + 0.00763286 + ], + "InPlanePhaseEncodingDirectionDICOM": "ROW", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-tokyo750w02/anat/sub-tokyo750w02_flip-2_mt-off_space-other_MTS.json b/derivatives/data_preprocessed/sub-tokyo750w02/anat/sub-tokyo750w02_flip-2_mt-off_space-other_MTS.json index 5d6a5e1a52..008b9cbbf7 100644 --- a/derivatives/data_preprocessed/sub-tokyo750w02/anat/sub-tokyo750w02_flip-2_mt-off_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-tokyo750w02/anat/sub-tokyo750w02_flip-2_mt-off_space-other_MTS.json @@ -1,43 +1,51 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 127.771, - "Manufacturer": "GE", - "ManufacturersModelName": "DISCOVERY_MR750w", - "InstitutionName": "TOKYO_UNIV_HOSPITAL", - "DeviceSerialNumber": "0000000000EM0204", - "StationName": "MRX07", - "PatientPosition": "HFS", - "SoftwareVersions": "24_LX_MR_Software_release:DV24.0_R01_1344.a", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-T1w", - "ProtocolName": "GRE-T1w", - "ScanningSequence": "GR", - "SequenceVariant": "SS_SP", - "ScanOptions": "EDR_GEMS_FILTERED_GEMS_PFF", - "ImageType": ["ORIGINAL", "PRIMARY", "OTHER"], - "SeriesNumber": 11, - "AcquisitionTime": "20:03:54.000000", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SpacingBetweenSlices": 5, - "SAR": 0.0263405, - "EchoTime": 0.004, - "RepetitionTime": 0.015, - "FlipAngle": 15, - "CoilString": "Head+Neck_40", - "PercentPhaseFOV": 100, - "AcquisitionMatrixPE": 192, - "ReconMatrixPE": 192, - "PixelBandwidth": 434.062, - "ImageOrientationPatientDICOM": [ - 0.999417, - 2.02422e-05, - 0.034151, - -0.000281053, - 0.999971, - 0.00763286 ], - "InPlanePhaseEncodingDirectionDICOM": "ROW", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 127.771, + "Manufacturer": "GE", + "ManufacturersModelName": "DISCOVERY_MR750w", + "InstitutionName": "TOKYO_UNIV_HOSPITAL", + "DeviceSerialNumber": "0000000000EM0204", + "StationName": "MRX07", + "PatientPosition": "HFS", + "SoftwareVersions": "24_LX_MR_Software_release:DV24.0_R01_1344.a", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-T1w", + "ProtocolName": "GRE-T1w", + "ScanningSequence": "GR", + "SequenceVariant": "SS_SP", + "ScanOptions": "EDR_GEMS_FILTERED_GEMS_PFF", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "OTHER" + ], + 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a/derivatives/data_preprocessed/sub-tokyo750w02/anat/sub-tokyo750w02_space-other_T1w.json +++ b/derivatives/data_preprocessed/sub-tokyo750w02/anat/sub-tokyo750w02_space-other_T1w.json @@ -1,44 +1,53 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 127.771, - "Manufacturer": "GE", - "ManufacturersModelName": "DISCOVERY_MR750w", - "InstitutionName": "TOKYO_UNIV_HOSPITAL", - "DeviceSerialNumber": "0000000000EM0204", - "StationName": "MRX07", - "PatientPosition": "HFS", - "SoftwareVersions": "24_LX_MR_Software_release:DV24.0_R01_1344.a", - "MRAcquisitionType": "3D", - "SeriesDescription": "T1w", - "ProtocolName": "T1w", - "ScanningSequence": "GR", - "SequenceVariant": "SS_SP_SK", - "ScanOptions": "FAST_GEMS_EDR_GEMS_FILTERED_GEMS_ACC_GEMS", - "ImageType": ["ORIGINAL", "PRIMARY", "OTHER"], - "SeriesNumber": 4, - "AcquisitionTime": "19:28:6.000000", - "AcquisitionNumber": 1, - "SliceThickness": 1, - "SpacingBetweenSlices": 0.499998, - "SAR": 0.12078, - "EchoTime": 0.00184, - "RepetitionTime": 0.00476, - "InversionTime": 1, - "FlipAngle": 9, - "CoilString": "Head+Neck_40", - "PercentPhaseFOV": 80, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 320, - "PixelBandwidth": 892.875, - "ImageOrientationPatientDICOM": [ - -2.07663e-05, - 1, - 1.688e-05, - 0.034151, - 1.75476e-05, - -0.999417 ], - "InPlanePhaseEncodingDirectionDICOM": "ROW", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 127.771, + "Manufacturer": "GE", + "ManufacturersModelName": "DISCOVERY_MR750w", + "InstitutionName": "TOKYO_UNIV_HOSPITAL", + "DeviceSerialNumber": "0000000000EM0204", + "StationName": "MRX07", + "PatientPosition": "HFS", + "SoftwareVersions": "24_LX_MR_Software_release:DV24.0_R01_1344.a", + "MRAcquisitionType": "3D", + "SeriesDescription": "T1w", + "ProtocolName": "T1w", + "ScanningSequence": "GR", + "SequenceVariant": "SS_SP_SK", + "ScanOptions": "FAST_GEMS_EDR_GEMS_FILTERED_GEMS_ACC_GEMS", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "OTHER" + ], + "SeriesNumber": 4, + "AcquisitionTime": "19:28:6.000000", + "AcquisitionNumber": 1, + "SliceThickness": 1, + "SpacingBetweenSlices": 0.499998, + "SAR": 0.12078, + "EchoTime": 0.00184, + "RepetitionTime": 0.00476, + "InversionTime": 1, + "FlipAngle": 9, + "CoilString": "Head+Neck_40", + "PercentPhaseFOV": 80, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 320, + "PixelBandwidth": 892.875, + "ImageOrientationPatientDICOM": [ + -2.07663e-05, + 1, + 1.688e-05, + 0.034151, + 1.75476e-05, + -0.999417 + ], + "InPlanePhaseEncodingDirectionDICOM": "ROW", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-tokyo750w02/anat/sub-tokyo750w02_space-other_T2star.json b/derivatives/data_preprocessed/sub-tokyo750w02/anat/sub-tokyo750w02_space-other_T2star.json index 7d92907e38..d48f38722f 100644 --- a/derivatives/data_preprocessed/sub-tokyo750w02/anat/sub-tokyo750w02_space-other_T2star.json +++ b/derivatives/data_preprocessed/sub-tokyo750w02/anat/sub-tokyo750w02_space-other_T2star.json @@ -48,5 +48,9 @@ "InPlanePhaseEncodingDirectionDICOM": "ROW", "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0", - "AcquisitionDuration": 288.0 + "AcquisitionDuration": 288.0, + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-tokyo750w02/anat/sub-tokyo750w02_space-other_T2w.json b/derivatives/data_preprocessed/sub-tokyo750w02/anat/sub-tokyo750w02_space-other_T2w.json index 2e43dd98bd..5124cb7106 100644 --- a/derivatives/data_preprocessed/sub-tokyo750w02/anat/sub-tokyo750w02_space-other_T2w.json +++ b/derivatives/data_preprocessed/sub-tokyo750w02/anat/sub-tokyo750w02_space-other_T2w.json @@ -1,44 +1,53 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 127.771, - "Manufacturer": "GE", - "ManufacturersModelName": "DISCOVERY_MR750w", - "InstitutionName": "TOKYO_UNIV_HOSPITAL", - "DeviceSerialNumber": "0000000000EM0204", - "StationName": "MRX07", - "PatientPosition": "HFS", - "SoftwareVersions": "24_LX_MR_Software_release:DV24.0_R01_1344.a", - "MRAcquisitionType": "3D", - "SeriesDescription": "T2w", - "ProtocolName": "T2w", - "ScanningSequence": "SE", - "SequenceVariant": "SK_OSP", - "ScanOptions": "FC_FREQ_AX_GEMS_FC_NPW_EDR_GEMS_FILTERED_GEMS_ACC_GEMS", - "ImageType": ["ORIGINAL", "PRIMARY", "OTHER"], - "SeriesNumber": 5, - "AcquisitionTime": "19:35:19.000000", - "AcquisitionNumber": 1, - "SliceThickness": 0.8, - "SpacingBetweenSlices": 0.8, - "SAR": 0.575892, - "EchoTime": 0.129519, - "RepetitionTime": 2.52, - "FlipAngle": 90, - "CoilString": "Head+Neck_40", - "PercentPhaseFOV": 100, - "EchoTrainLength": 78, - "AcquisitionMatrixPE": 320, - "ReconMatrixPE": 320, - "PixelBandwidth": 520.812, - "ImageOrientationPatientDICOM": [ - 0.0271679, - 0.99963, - -0.000941515, - 0.0343913, - -0.00187594, - -0.999407 ], - "InPlanePhaseEncodingDirectionDICOM": "ROW", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 127.771, + "Manufacturer": "GE", + "ManufacturersModelName": "DISCOVERY_MR750w", + "InstitutionName": "TOKYO_UNIV_HOSPITAL", + "DeviceSerialNumber": "0000000000EM0204", + "StationName": "MRX07", + "PatientPosition": "HFS", + "SoftwareVersions": "24_LX_MR_Software_release:DV24.0_R01_1344.a", + "MRAcquisitionType": "3D", + "SeriesDescription": "T2w", + "ProtocolName": "T2w", + "ScanningSequence": "SE", + "SequenceVariant": "SK_OSP", + "ScanOptions": "FC_FREQ_AX_GEMS_FC_NPW_EDR_GEMS_FILTERED_GEMS_ACC_GEMS", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "OTHER" + ], + "SeriesNumber": 5, + "AcquisitionTime": "19:35:19.000000", + "AcquisitionNumber": 1, + "SliceThickness": 0.8, + "SpacingBetweenSlices": 0.8, + "SAR": 0.575892, + "EchoTime": 0.129519, + "RepetitionTime": 2.52, + "FlipAngle": 90, + "CoilString": "Head+Neck_40", + "PercentPhaseFOV": 100, + "EchoTrainLength": 78, + "AcquisitionMatrixPE": 320, + "ReconMatrixPE": 320, + "PixelBandwidth": 520.812, + "ImageOrientationPatientDICOM": [ + 0.0271679, + 0.99963, + -0.000941515, + 0.0343913, + -0.00187594, + -0.999407 + ], + "InPlanePhaseEncodingDirectionDICOM": "ROW", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-tokyo750w03/anat/sub-tokyo750w03_flip-1_mt-on_space-other_MTS.json b/derivatives/data_preprocessed/sub-tokyo750w03/anat/sub-tokyo750w03_flip-1_mt-on_space-other_MTS.json index cd6887e680..1738d5b272 100644 --- a/derivatives/data_preprocessed/sub-tokyo750w03/anat/sub-tokyo750w03_flip-1_mt-on_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-tokyo750w03/anat/sub-tokyo750w03_flip-1_mt-on_space-other_MTS.json @@ -1,43 +1,51 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 127.771, - "Manufacturer": "GE", - "ManufacturersModelName": "DISCOVERY_MR750w", - "InstitutionName": "TOKYO_UNIV_HOSPITAL", - "DeviceSerialNumber": "0000000000EM0204", - "StationName": "MRX07", - "PatientPosition": "HFS", - "SoftwareVersions": "24_LX_MR_Software_release:DV24.0_R01_1344.a", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-MT1", - "ProtocolName": "GRE-MT1", - "ScanningSequence": "GR", - "SequenceVariant": "SS_SP", - "ScanOptions": "EDR_GEMS_MT_GEMS_FILTERED_GEMS_PFF", - "ImageType": ["ORIGINAL", "PRIMARY", "OTHER"], - "SeriesNumber": 9, - "AcquisitionTime": "20:03:15.000000", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SpacingBetweenSlices": 5, - "SAR": 0.754839, - "EchoTime": 0.004, - "RepetitionTime": 0.035, - "FlipAngle": 9, - "CoilString": "Head+Neck_40", - "PercentPhaseFOV": 100, - "AcquisitionMatrixPE": 192, - "ReconMatrixPE": 192, - "PixelBandwidth": 434.062, - "ImageOrientationPatientDICOM": [ - 0.999796, - 0.000903311, - 0.0201589, - -0.00382647, - 0.989359, - 0.145443 ], - "InPlanePhaseEncodingDirectionDICOM": "ROW", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 127.771, + "Manufacturer": "GE", + "ManufacturersModelName": "DISCOVERY_MR750w", + "InstitutionName": "TOKYO_UNIV_HOSPITAL", + "DeviceSerialNumber": "0000000000EM0204", + "StationName": "MRX07", + "PatientPosition": "HFS", + "SoftwareVersions": "24_LX_MR_Software_release:DV24.0_R01_1344.a", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-MT1", + "ProtocolName": "GRE-MT1", + "ScanningSequence": "GR", + "SequenceVariant": "SS_SP", + "ScanOptions": "EDR_GEMS_MT_GEMS_FILTERED_GEMS_PFF", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "OTHER" + ], + "SeriesNumber": 9, + "AcquisitionTime": "20:03:15.000000", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SpacingBetweenSlices": 5, + "SAR": 0.754839, + "EchoTime": 0.004, + "RepetitionTime": 0.035, + "FlipAngle": 9, + "CoilString": "Head+Neck_40", + "PercentPhaseFOV": 100, + "AcquisitionMatrixPE": 192, + "ReconMatrixPE": 192, + "PixelBandwidth": 434.062, + "ImageOrientationPatientDICOM": [ + 0.999796, + 0.000903311, + 0.0201589, + -0.00382647, + 0.989359, + 0.145443 + ], + "InPlanePhaseEncodingDirectionDICOM": "ROW", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-tokyo750w03/anat/sub-tokyo750w03_flip-2_mt-off_space-other_MTS.json b/derivatives/data_preprocessed/sub-tokyo750w03/anat/sub-tokyo750w03_flip-2_mt-off_space-other_MTS.json index 967b2df27a..edeb66228b 100644 --- a/derivatives/data_preprocessed/sub-tokyo750w03/anat/sub-tokyo750w03_flip-2_mt-off_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-tokyo750w03/anat/sub-tokyo750w03_flip-2_mt-off_space-other_MTS.json @@ -1,43 +1,51 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 127.771, - "Manufacturer": "GE", - "ManufacturersModelName": "DISCOVERY_MR750w", - "InstitutionName": "TOKYO_UNIV_HOSPITAL", - "DeviceSerialNumber": "0000000000EM0204", - "StationName": "MRX07", - "PatientPosition": "HFS", - "SoftwareVersions": "24_LX_MR_Software_release:DV24.0_R01_1344.a", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-T1w", - "ProtocolName": "GRE-T1w", - "ScanningSequence": "GR", - "SequenceVariant": "SS_SP", - "ScanOptions": "EDR_GEMS_FILTERED_GEMS_PFF", - "ImageType": ["ORIGINAL", "PRIMARY", "OTHER"], - "SeriesNumber": 10, - "AcquisitionTime": "20:07:29.000000", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SpacingBetweenSlices": 5, - "SAR": 0.0120612, - "EchoTime": 0.004, - "RepetitionTime": 0.015, - "FlipAngle": 15, - "CoilString": "Head+Neck_40", - "PercentPhaseFOV": 100, - "AcquisitionMatrixPE": 192, - "ReconMatrixPE": 192, - "PixelBandwidth": 434.062, - "ImageOrientationPatientDICOM": [ - 0.999796, - 0.000903311, - 0.0201589, - -0.00382647, - 0.989359, - 0.145443 ], - "InPlanePhaseEncodingDirectionDICOM": "ROW", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 127.771, + "Manufacturer": "GE", + "ManufacturersModelName": "DISCOVERY_MR750w", + "InstitutionName": "TOKYO_UNIV_HOSPITAL", + "DeviceSerialNumber": "0000000000EM0204", + "StationName": "MRX07", + "PatientPosition": "HFS", + "SoftwareVersions": "24_LX_MR_Software_release:DV24.0_R01_1344.a", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-T1w", + "ProtocolName": "GRE-T1w", + "ScanningSequence": "GR", + "SequenceVariant": "SS_SP", + "ScanOptions": "EDR_GEMS_FILTERED_GEMS_PFF", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "OTHER" + ], + "SeriesNumber": 10, + "AcquisitionTime": "20:07:29.000000", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SpacingBetweenSlices": 5, + "SAR": 0.0120612, + "EchoTime": 0.004, + "RepetitionTime": 0.015, + "FlipAngle": 15, + "CoilString": "Head+Neck_40", + "PercentPhaseFOV": 100, + "AcquisitionMatrixPE": 192, + "ReconMatrixPE": 192, + "PixelBandwidth": 434.062, + "ImageOrientationPatientDICOM": [ + 0.999796, + 0.000903311, + 0.0201589, + -0.00382647, + 0.989359, + 0.145443 + ], + "InPlanePhaseEncodingDirectionDICOM": "ROW", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-tokyo750w03/anat/sub-tokyo750w03_space-other_T1w.json b/derivatives/data_preprocessed/sub-tokyo750w03/anat/sub-tokyo750w03_space-other_T1w.json index c10857f38e..7de6d572f1 100644 --- a/derivatives/data_preprocessed/sub-tokyo750w03/anat/sub-tokyo750w03_space-other_T1w.json +++ b/derivatives/data_preprocessed/sub-tokyo750w03/anat/sub-tokyo750w03_space-other_T1w.json @@ -1,44 +1,53 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 127.772, - "Manufacturer": "GE", - "ManufacturersModelName": "DISCOVERY_MR750w", - "InstitutionName": "TOKYO_UNIV_HOSPITAL", - "DeviceSerialNumber": "0000000000EM0204", - "StationName": "MRX07", - "PatientPosition": "HFS", - "SoftwareVersions": "24_LX_MR_Software_release:DV24.0_R01_1344.a", - "MRAcquisitionType": "3D", - "SeriesDescription": "T1w", - "ProtocolName": "T1w", - "ScanningSequence": "GR", - "SequenceVariant": "SS_SP_SK", - "ScanOptions": "FAST_GEMS_EDR_GEMS_FILTERED_GEMS_ACC_GEMS", - "ImageType": ["ORIGINAL", "PRIMARY", "OTHER"], - "SeriesNumber": 4, - "AcquisitionTime": "19:36:35.000000", - "AcquisitionNumber": 1, - "SliceThickness": 1, - "SpacingBetweenSlices": 0.500001, - "SAR": 0.0553043, - "EchoTime": 0.001848, - "RepetitionTime": 0.00476, - "InversionTime": 1, - "FlipAngle": 9, - "CoilString": "Head+Neck_40", - "PercentPhaseFOV": 80, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 320, - "PixelBandwidth": 892.875, - "ImageOrientationPatientDICOM": [ - -0.000902677, - 1, - -4.10557e-05, - 0.0201589, - -2.28405e-05, - -0.999797 ], - "InPlanePhaseEncodingDirectionDICOM": "ROW", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 127.772, + "Manufacturer": "GE", + "ManufacturersModelName": "DISCOVERY_MR750w", + "InstitutionName": "TOKYO_UNIV_HOSPITAL", + "DeviceSerialNumber": "0000000000EM0204", + "StationName": "MRX07", + "PatientPosition": "HFS", + "SoftwareVersions": "24_LX_MR_Software_release:DV24.0_R01_1344.a", + "MRAcquisitionType": "3D", + "SeriesDescription": "T1w", + "ProtocolName": "T1w", + "ScanningSequence": "GR", + "SequenceVariant": "SS_SP_SK", + "ScanOptions": "FAST_GEMS_EDR_GEMS_FILTERED_GEMS_ACC_GEMS", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "OTHER" + ], + "SeriesNumber": 4, + "AcquisitionTime": "19:36:35.000000", + "AcquisitionNumber": 1, + "SliceThickness": 1, + "SpacingBetweenSlices": 0.500001, + "SAR": 0.0553043, + "EchoTime": 0.001848, + "RepetitionTime": 0.00476, + "InversionTime": 1, + "FlipAngle": 9, + "CoilString": "Head+Neck_40", + "PercentPhaseFOV": 80, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 320, + "PixelBandwidth": 892.875, + "ImageOrientationPatientDICOM": [ + -0.000902677, + 1, + -4.10557e-05, + 0.0201589, + -2.28405e-05, + -0.999797 + ], + "InPlanePhaseEncodingDirectionDICOM": "ROW", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-tokyo750w03/anat/sub-tokyo750w03_space-other_T2star.json b/derivatives/data_preprocessed/sub-tokyo750w03/anat/sub-tokyo750w03_space-other_T2star.json index f596d534f3..9645c5995e 100644 --- a/derivatives/data_preprocessed/sub-tokyo750w03/anat/sub-tokyo750w03_space-other_T2star.json +++ b/derivatives/data_preprocessed/sub-tokyo750w03/anat/sub-tokyo750w03_space-other_T2star.json @@ -48,5 +48,9 @@ "InPlanePhaseEncodingDirectionDICOM": "ROW", "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0", - "AcquisitionDuration": 288.0 + "AcquisitionDuration": 288.0, + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-tokyo750w03/anat/sub-tokyo750w03_space-other_T2w.json b/derivatives/data_preprocessed/sub-tokyo750w03/anat/sub-tokyo750w03_space-other_T2w.json index defe4d5aa2..e8556c4207 100644 --- a/derivatives/data_preprocessed/sub-tokyo750w03/anat/sub-tokyo750w03_space-other_T2w.json +++ b/derivatives/data_preprocessed/sub-tokyo750w03/anat/sub-tokyo750w03_space-other_T2w.json @@ -1,44 +1,53 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 127.771, - "Manufacturer": "GE", - "ManufacturersModelName": "DISCOVERY_MR750w", - "InstitutionName": "TOKYO_UNIV_HOSPITAL", - "DeviceSerialNumber": "0000000000EM0204", - "StationName": "MRX07", - "PatientPosition": "HFS", - "SoftwareVersions": "24_LX_MR_Software_release:DV24.0_R01_1344.a", - "MRAcquisitionType": "3D", - "SeriesDescription": "T2w", - "ProtocolName": "T2w", - "ScanningSequence": "SE", - "SequenceVariant": "SK_OSP", - "ScanOptions": "FC_FREQ_AX_GEMS_FC_NPW_EDR_GEMS_FILTERED_GEMS_ACC_GEMS", - "ImageType": ["ORIGINAL", "PRIMARY", "OTHER"], - "SeriesNumber": 7, - "AcquisitionTime": "19:53:51.000000", - "AcquisitionNumber": 1, - "SliceThickness": 0.8, - "SpacingBetweenSlices": 0.8, - "SAR": 0.387657, - "EchoTime": 0.129512, - "RepetitionTime": 2.52, - "FlipAngle": 90, - "CoilString": "Head+Neck_40", - "PercentPhaseFOV": 100, - "EchoTrainLength": 78, - "AcquisitionMatrixPE": 320, - "ReconMatrixPE": 320, - "PixelBandwidth": 520.812, - "ImageOrientationPatientDICOM": [ - 0.0011396, - 0.999999, - 7.03335e-05, - 0.018079, - 4.96507e-05, - -0.999837 ], - "InPlanePhaseEncodingDirectionDICOM": "ROW", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 127.771, + "Manufacturer": "GE", + "ManufacturersModelName": "DISCOVERY_MR750w", + "InstitutionName": "TOKYO_UNIV_HOSPITAL", + "DeviceSerialNumber": "0000000000EM0204", + "StationName": "MRX07", + "PatientPosition": "HFS", + "SoftwareVersions": "24_LX_MR_Software_release:DV24.0_R01_1344.a", + "MRAcquisitionType": "3D", + "SeriesDescription": "T2w", + "ProtocolName": "T2w", + "ScanningSequence": "SE", + "SequenceVariant": "SK_OSP", + "ScanOptions": "FC_FREQ_AX_GEMS_FC_NPW_EDR_GEMS_FILTERED_GEMS_ACC_GEMS", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "OTHER" + ], + "SeriesNumber": 7, + "AcquisitionTime": "19:53:51.000000", + "AcquisitionNumber": 1, + "SliceThickness": 0.8, + "SpacingBetweenSlices": 0.8, + "SAR": 0.387657, + "EchoTime": 0.129512, + "RepetitionTime": 2.52, + "FlipAngle": 90, + "CoilString": "Head+Neck_40", + "PercentPhaseFOV": 100, + "EchoTrainLength": 78, + "AcquisitionMatrixPE": 320, + "ReconMatrixPE": 320, + "PixelBandwidth": 520.812, + "ImageOrientationPatientDICOM": [ + 0.0011396, + 0.999999, + 7.03335e-05, + 0.018079, + 4.96507e-05, + -0.999837 + ], + "InPlanePhaseEncodingDirectionDICOM": "ROW", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-tokyo750w04/anat/sub-tokyo750w04_flip-1_mt-on_space-other_MTS.json b/derivatives/data_preprocessed/sub-tokyo750w04/anat/sub-tokyo750w04_flip-1_mt-on_space-other_MTS.json index 75f100427e..a9e0af72ca 100644 --- a/derivatives/data_preprocessed/sub-tokyo750w04/anat/sub-tokyo750w04_flip-1_mt-on_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-tokyo750w04/anat/sub-tokyo750w04_flip-1_mt-on_space-other_MTS.json @@ -1,43 +1,51 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 127.771, - "Manufacturer": "GE", - "ManufacturersModelName": "DISCOVERY_MR750w", - "InstitutionName": "TOKYO_UNIV_HOSPITAL", - "DeviceSerialNumber": "0000000000EM0204", - "StationName": "MRX07", - "PatientPosition": "HFS", - "SoftwareVersions": "24_LX_MR_Software_release:DV24.0_R01_1344.a", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-MT1", - "ProtocolName": "GRE-MT1", - "ScanningSequence": "GR", - "SequenceVariant": "SS_SP", - "ScanOptions": "EDR_GEMS_MT_GEMS_FILTERED_GEMS_PFF", - "ImageType": ["ORIGINAL", "PRIMARY", "OTHER"], - "SeriesNumber": 8, - "AcquisitionTime": "18:54:55.000000", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SpacingBetweenSlices": 5, - "SAR": 1.21954, - "EchoTime": 0.004, - "RepetitionTime": 0.035, - "FlipAngle": 9, - "CoilString": "Head+Neck_40", - "PercentPhaseFOV": 100, - "AcquisitionMatrixPE": 192, - "ReconMatrixPE": 192, - "PixelBandwidth": 434.062, - "ImageOrientationPatientDICOM": [ - 0.996906, - -0.0305727, - 0.0724152, - 0.02717, - 0.998501, - 0.0475169 ], - "InPlanePhaseEncodingDirectionDICOM": "ROW", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 127.771, + "Manufacturer": "GE", + "ManufacturersModelName": "DISCOVERY_MR750w", + "InstitutionName": "TOKYO_UNIV_HOSPITAL", + "DeviceSerialNumber": "0000000000EM0204", + "StationName": "MRX07", + "PatientPosition": "HFS", + "SoftwareVersions": "24_LX_MR_Software_release:DV24.0_R01_1344.a", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-MT1", + "ProtocolName": "GRE-MT1", + "ScanningSequence": "GR", + "SequenceVariant": "SS_SP", + "ScanOptions": "EDR_GEMS_MT_GEMS_FILTERED_GEMS_PFF", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "OTHER" + ], + "SeriesNumber": 8, + "AcquisitionTime": "18:54:55.000000", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SpacingBetweenSlices": 5, + "SAR": 1.21954, + "EchoTime": 0.004, + "RepetitionTime": 0.035, + "FlipAngle": 9, + "CoilString": "Head+Neck_40", + "PercentPhaseFOV": 100, + "AcquisitionMatrixPE": 192, + "ReconMatrixPE": 192, + "PixelBandwidth": 434.062, + "ImageOrientationPatientDICOM": [ + 0.996906, + -0.0305727, + 0.0724152, + 0.02717, + 0.998501, + 0.0475169 + ], + "InPlanePhaseEncodingDirectionDICOM": "ROW", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-tokyo750w04/anat/sub-tokyo750w04_flip-2_mt-off_space-other_MTS.json b/derivatives/data_preprocessed/sub-tokyo750w04/anat/sub-tokyo750w04_flip-2_mt-off_space-other_MTS.json index e08afcad74..eadd465e71 100644 --- a/derivatives/data_preprocessed/sub-tokyo750w04/anat/sub-tokyo750w04_flip-2_mt-off_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-tokyo750w04/anat/sub-tokyo750w04_flip-2_mt-off_space-other_MTS.json @@ -1,43 +1,51 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 127.771, - "Manufacturer": "GE", - "ManufacturersModelName": "DISCOVERY_MR750w", - "InstitutionName": "TOKYO_UNIV_HOSPITAL", - "DeviceSerialNumber": "0000000000EM0204", - "StationName": "MRX07", - "PatientPosition": "HFS", - "SoftwareVersions": "24_LX_MR_Software_release:DV24.0_R01_1344.a", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-T1w", - "ProtocolName": "GRE-T1w", - "ScanningSequence": "GR", - "SequenceVariant": "SS_SP", - "ScanOptions": "EDR_GEMS_FILTERED_GEMS_PFF", - "ImageType": ["ORIGINAL", "PRIMARY", "OTHER"], - "SeriesNumber": 9, - "AcquisitionTime": "19:00:30.000000", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SpacingBetweenSlices": 5, - "SAR": 0.0194864, - "EchoTime": 0.004, - "RepetitionTime": 0.015, - "FlipAngle": 15, - "CoilString": "Head+Neck_40", - "PercentPhaseFOV": 100, - "AcquisitionMatrixPE": 192, - "ReconMatrixPE": 192, - "PixelBandwidth": 434.062, - "ImageOrientationPatientDICOM": [ - 0.996906, - -0.0305727, - 0.0724152, - 0.02717, - 0.998501, - 0.0475169 ], - "InPlanePhaseEncodingDirectionDICOM": "ROW", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 127.771, + "Manufacturer": "GE", + "ManufacturersModelName": "DISCOVERY_MR750w", + "InstitutionName": "TOKYO_UNIV_HOSPITAL", + "DeviceSerialNumber": "0000000000EM0204", + "StationName": "MRX07", + "PatientPosition": "HFS", + "SoftwareVersions": "24_LX_MR_Software_release:DV24.0_R01_1344.a", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-T1w", + "ProtocolName": "GRE-T1w", + "ScanningSequence": "GR", + "SequenceVariant": "SS_SP", + "ScanOptions": "EDR_GEMS_FILTERED_GEMS_PFF", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "OTHER" + ], + "SeriesNumber": 9, + "AcquisitionTime": "19:00:30.000000", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SpacingBetweenSlices": 5, + "SAR": 0.0194864, + "EchoTime": 0.004, + "RepetitionTime": 0.015, + "FlipAngle": 15, + "CoilString": "Head+Neck_40", + "PercentPhaseFOV": 100, + "AcquisitionMatrixPE": 192, + "ReconMatrixPE": 192, + "PixelBandwidth": 434.062, + "ImageOrientationPatientDICOM": [ + 0.996906, + -0.0305727, + 0.0724152, + 0.02717, + 0.998501, + 0.0475169 + ], + "InPlanePhaseEncodingDirectionDICOM": "ROW", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-tokyo750w04/anat/sub-tokyo750w04_space-other_T1w.json b/derivatives/data_preprocessed/sub-tokyo750w04/anat/sub-tokyo750w04_space-other_T1w.json index b83350e67e..86aaf5d68b 100644 --- a/derivatives/data_preprocessed/sub-tokyo750w04/anat/sub-tokyo750w04_space-other_T1w.json +++ b/derivatives/data_preprocessed/sub-tokyo750w04/anat/sub-tokyo750w04_space-other_T1w.json @@ -1,44 +1,53 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 127.771, - "Manufacturer": "GE", - "ManufacturersModelName": "DISCOVERY_MR750w", - "InstitutionName": "TOKYO_UNIV_HOSPITAL", - "DeviceSerialNumber": "0000000000EM0204", - "StationName": "MRX07", - "PatientPosition": "HFS", - "SoftwareVersions": "24_LX_MR_Software_release:DV24.0_R01_1344.a", - "MRAcquisitionType": "3D", - "SeriesDescription": "T1w", - "ProtocolName": "T1w", - "ScanningSequence": "GR", - "SequenceVariant": "SS_SP_SK", - "ScanOptions": "FAST_GEMS_EDR_GEMS_FILTERED_GEMS_ACC_GEMS", - "ImageType": ["ORIGINAL", "PRIMARY", "OTHER"], - "SeriesNumber": 4, - "AcquisitionTime": "18:33:24.000000", - "AcquisitionNumber": 1, - "SliceThickness": 1, - "SpacingBetweenSlices": 0.500002, - "SAR": 0.08907, - "EchoTime": 0.001852, - "RepetitionTime": 0.004808, - "InversionTime": 1, - "FlipAngle": 9, - "CoilString": "Head+Neck_40", - "PercentPhaseFOV": 80, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 320, - "PixelBandwidth": 892.875, - "ImageOrientationPatientDICOM": [ - 0.0293944, - 0.999568, - -0.000254726, - 0.0403772, - -0.00144205, - -0.999183 ], - "InPlanePhaseEncodingDirectionDICOM": "ROW", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 127.771, + "Manufacturer": "GE", + "ManufacturersModelName": "DISCOVERY_MR750w", + "InstitutionName": "TOKYO_UNIV_HOSPITAL", + "DeviceSerialNumber": "0000000000EM0204", + "StationName": "MRX07", + "PatientPosition": "HFS", + "SoftwareVersions": "24_LX_MR_Software_release:DV24.0_R01_1344.a", + "MRAcquisitionType": "3D", + "SeriesDescription": "T1w", + "ProtocolName": "T1w", + "ScanningSequence": "GR", + "SequenceVariant": "SS_SP_SK", + "ScanOptions": "FAST_GEMS_EDR_GEMS_FILTERED_GEMS_ACC_GEMS", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "OTHER" + ], + "SeriesNumber": 4, + "AcquisitionTime": "18:33:24.000000", + "AcquisitionNumber": 1, + "SliceThickness": 1, + "SpacingBetweenSlices": 0.500002, + "SAR": 0.08907, + "EchoTime": 0.001852, + "RepetitionTime": 0.004808, + "InversionTime": 1, + "FlipAngle": 9, + "CoilString": "Head+Neck_40", + "PercentPhaseFOV": 80, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 320, + "PixelBandwidth": 892.875, + "ImageOrientationPatientDICOM": [ + 0.0293944, + 0.999568, + -0.000254726, + 0.0403772, + -0.00144205, + -0.999183 + ], + "InPlanePhaseEncodingDirectionDICOM": "ROW", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-tokyo750w04/anat/sub-tokyo750w04_space-other_T2star.json b/derivatives/data_preprocessed/sub-tokyo750w04/anat/sub-tokyo750w04_space-other_T2star.json index d68f7b919f..97b7bb672c 100644 --- a/derivatives/data_preprocessed/sub-tokyo750w04/anat/sub-tokyo750w04_space-other_T2star.json +++ b/derivatives/data_preprocessed/sub-tokyo750w04/anat/sub-tokyo750w04_space-other_T2star.json @@ -48,5 +48,9 @@ "InPlanePhaseEncodingDirectionDICOM": "ROW", "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0", - "AcquisitionDuration": 288.0 + "AcquisitionDuration": 288.0, + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-tokyo750w04/anat/sub-tokyo750w04_space-other_T2w.json b/derivatives/data_preprocessed/sub-tokyo750w04/anat/sub-tokyo750w04_space-other_T2w.json index a8b33269b7..aa4ae451b9 100644 --- a/derivatives/data_preprocessed/sub-tokyo750w04/anat/sub-tokyo750w04_space-other_T2w.json +++ b/derivatives/data_preprocessed/sub-tokyo750w04/anat/sub-tokyo750w04_space-other_T2w.json @@ -1,44 +1,53 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 127.771, - "Manufacturer": "GE", - "ManufacturersModelName": "DISCOVERY_MR750w", - "InstitutionName": "TOKYO_UNIV_HOSPITAL", - "DeviceSerialNumber": "0000000000EM0204", - "StationName": "MRX07", - "PatientPosition": "HFS", - "SoftwareVersions": "24_LX_MR_Software_release:DV24.0_R01_1344.a", - "MRAcquisitionType": "3D", - "SeriesDescription": "T2w", - "ProtocolName": "T2w", - "ScanningSequence": "SE", - "SequenceVariant": "SK_OSP", - "ScanOptions": "FC_FREQ_AX_GEMS_FC_NPW_EDR_GEMS_FILTERED_GEMS_ACC_GEMS", - "ImageType": ["ORIGINAL", "PRIMARY", "OTHER"], - "SeriesNumber": 5, - "AcquisitionTime": "18:39:33.000000", - "AcquisitionNumber": 1, - "SliceThickness": 0.8, - "SpacingBetweenSlices": 0.8, - "SAR": 0.501602, - "EchoTime": 0.128746, - "RepetitionTime": 2.52, - "FlipAngle": 90, - "CoilString": "Head+Neck_40", - "PercentPhaseFOV": 100, - "EchoTrainLength": 78, - "AcquisitionMatrixPE": 320, - "ReconMatrixPE": 320, - "PixelBandwidth": 520.812, - "ImageOrientationPatientDICOM": [ - 0.0461997, - 0.99893, - -0.00205129, - 0.0599631, - -0.00482303, - -0.998189 ], - "InPlanePhaseEncodingDirectionDICOM": "ROW", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 127.771, + "Manufacturer": "GE", + "ManufacturersModelName": "DISCOVERY_MR750w", + "InstitutionName": "TOKYO_UNIV_HOSPITAL", + "DeviceSerialNumber": "0000000000EM0204", + "StationName": "MRX07", + "PatientPosition": "HFS", + "SoftwareVersions": "24_LX_MR_Software_release:DV24.0_R01_1344.a", + "MRAcquisitionType": "3D", + "SeriesDescription": "T2w", + "ProtocolName": "T2w", + "ScanningSequence": "SE", + "SequenceVariant": "SK_OSP", + "ScanOptions": "FC_FREQ_AX_GEMS_FC_NPW_EDR_GEMS_FILTERED_GEMS_ACC_GEMS", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "OTHER" + ], + "SeriesNumber": 5, + "AcquisitionTime": "18:39:33.000000", + "AcquisitionNumber": 1, + "SliceThickness": 0.8, + "SpacingBetweenSlices": 0.8, + "SAR": 0.501602, + "EchoTime": 0.128746, + "RepetitionTime": 2.52, + "FlipAngle": 90, + "CoilString": "Head+Neck_40", + "PercentPhaseFOV": 100, + "EchoTrainLength": 78, + "AcquisitionMatrixPE": 320, + "ReconMatrixPE": 320, + "PixelBandwidth": 520.812, + "ImageOrientationPatientDICOM": [ + 0.0461997, + 0.99893, + -0.00205129, + 0.0599631, + -0.00482303, + -0.998189 + ], + "InPlanePhaseEncodingDirectionDICOM": "ROW", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-tokyo750w05/anat/sub-tokyo750w05_flip-1_mt-on_space-other_MTS.json b/derivatives/data_preprocessed/sub-tokyo750w05/anat/sub-tokyo750w05_flip-1_mt-on_space-other_MTS.json index 5b23c6def5..7748360d14 100644 --- a/derivatives/data_preprocessed/sub-tokyo750w05/anat/sub-tokyo750w05_flip-1_mt-on_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-tokyo750w05/anat/sub-tokyo750w05_flip-1_mt-on_space-other_MTS.json @@ -1,43 +1,51 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 127.771, - "Manufacturer": "GE", - "ManufacturersModelName": "DISCOVERY_MR750w", - "InstitutionName": "TOKYO_UNIV_HOSPITAL", - "DeviceSerialNumber": "0000000000EM0204", - "StationName": "MRX07", - "PatientPosition": "HFS", - "SoftwareVersions": "24_LX_MR_Software_release:DV24.0_R01_1344.a", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-MT1", - "ProtocolName": "GRE-MT1", - "ScanningSequence": "GR", - "SequenceVariant": "SS_SP", - "ScanOptions": "EDR_GEMS_MT_GEMS_FILTERED_GEMS_PFF", - "ImageType": ["ORIGINAL", "PRIMARY", "OTHER"], - "SeriesNumber": 8, - "AcquisitionTime": "13:25:48.000000", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SpacingBetweenSlices": 5, - "SAR": 0.647599, - "EchoTime": 0.004, - "RepetitionTime": 0.035, - "FlipAngle": 9, - "CoilString": "Head+Neck_40", - "PercentPhaseFOV": 100, - "AcquisitionMatrixPE": 192, - "ReconMatrixPE": 192, - "PixelBandwidth": 434.062, - "ImageOrientationPatientDICOM": [ - 0.996676, - 0.0754025, - 0.0308545, - -0.0785734, - 0.989733, - 0.119393 ], - "InPlanePhaseEncodingDirectionDICOM": "ROW", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 127.771, + "Manufacturer": "GE", + "ManufacturersModelName": "DISCOVERY_MR750w", + "InstitutionName": "TOKYO_UNIV_HOSPITAL", + "DeviceSerialNumber": "0000000000EM0204", + "StationName": "MRX07", + "PatientPosition": "HFS", + "SoftwareVersions": "24_LX_MR_Software_release:DV24.0_R01_1344.a", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-MT1", + "ProtocolName": "GRE-MT1", + "ScanningSequence": "GR", + "SequenceVariant": "SS_SP", + "ScanOptions": "EDR_GEMS_MT_GEMS_FILTERED_GEMS_PFF", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "OTHER" + ], + "SeriesNumber": 8, + "AcquisitionTime": "13:25:48.000000", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SpacingBetweenSlices": 5, + "SAR": 0.647599, + "EchoTime": 0.004, + "RepetitionTime": 0.035, + "FlipAngle": 9, + "CoilString": "Head+Neck_40", + "PercentPhaseFOV": 100, + "AcquisitionMatrixPE": 192, + "ReconMatrixPE": 192, + "PixelBandwidth": 434.062, + "ImageOrientationPatientDICOM": [ + 0.996676, + 0.0754025, + 0.0308545, + -0.0785734, + 0.989733, + 0.119393 + ], + "InPlanePhaseEncodingDirectionDICOM": "ROW", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-tokyo750w05/anat/sub-tokyo750w05_flip-2_mt-off_space-other_MTS.json b/derivatives/data_preprocessed/sub-tokyo750w05/anat/sub-tokyo750w05_flip-2_mt-off_space-other_MTS.json index f1afb83df4..7a86d64a01 100644 --- a/derivatives/data_preprocessed/sub-tokyo750w05/anat/sub-tokyo750w05_flip-2_mt-off_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-tokyo750w05/anat/sub-tokyo750w05_flip-2_mt-off_space-other_MTS.json @@ -1,43 +1,51 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 127.771, - "Manufacturer": "GE", - "ManufacturersModelName": "DISCOVERY_MR750w", - "InstitutionName": "TOKYO_UNIV_HOSPITAL", - "DeviceSerialNumber": "0000000000EM0204", - "StationName": "MRX07", - "PatientPosition": "HFS", - "SoftwareVersions": "24_LX_MR_Software_release:DV24.0_R01_1344.a", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-T1w", - "ProtocolName": "GRE-T1w", - "ScanningSequence": "GR", - "SequenceVariant": "SS_SP", - "ScanOptions": "EDR_GEMS_FILTERED_GEMS_PFF", - "ImageType": ["ORIGINAL", "PRIMARY", "OTHER"], - "SeriesNumber": 9, - "AcquisitionTime": "13:30:8.000000", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SpacingBetweenSlices": 5, - "SAR": 0.0103476, - "EchoTime": 0.004, - "RepetitionTime": 0.015, - "FlipAngle": 15, - "CoilString": "Head+Neck_40", - "PercentPhaseFOV": 100, - "AcquisitionMatrixPE": 192, - "ReconMatrixPE": 192, - "PixelBandwidth": 434.062, - "ImageOrientationPatientDICOM": [ - 0.996676, - 0.0754025, - 0.0308545, - -0.0785734, - 0.989733, - 0.119393 ], - "InPlanePhaseEncodingDirectionDICOM": "ROW", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 127.771, + "Manufacturer": "GE", + "ManufacturersModelName": "DISCOVERY_MR750w", + "InstitutionName": "TOKYO_UNIV_HOSPITAL", + "DeviceSerialNumber": "0000000000EM0204", + "StationName": "MRX07", + "PatientPosition": "HFS", + "SoftwareVersions": "24_LX_MR_Software_release:DV24.0_R01_1344.a", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-T1w", + "ProtocolName": "GRE-T1w", + "ScanningSequence": "GR", + "SequenceVariant": "SS_SP", + "ScanOptions": "EDR_GEMS_FILTERED_GEMS_PFF", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "OTHER" + ], + "SeriesNumber": 9, + "AcquisitionTime": "13:30:8.000000", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SpacingBetweenSlices": 5, + "SAR": 0.0103476, + "EchoTime": 0.004, + "RepetitionTime": 0.015, + "FlipAngle": 15, + "CoilString": "Head+Neck_40", + "PercentPhaseFOV": 100, + "AcquisitionMatrixPE": 192, + "ReconMatrixPE": 192, + "PixelBandwidth": 434.062, + "ImageOrientationPatientDICOM": [ + 0.996676, + 0.0754025, + 0.0308545, + -0.0785734, + 0.989733, + 0.119393 + ], + "InPlanePhaseEncodingDirectionDICOM": "ROW", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-tokyo750w05/anat/sub-tokyo750w05_space-other_T1w.json b/derivatives/data_preprocessed/sub-tokyo750w05/anat/sub-tokyo750w05_space-other_T1w.json index 7237838080..eb71e1d99a 100644 --- a/derivatives/data_preprocessed/sub-tokyo750w05/anat/sub-tokyo750w05_space-other_T1w.json +++ b/derivatives/data_preprocessed/sub-tokyo750w05/anat/sub-tokyo750w05_space-other_T1w.json @@ -1,44 +1,53 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 127.772, - "Manufacturer": "GE", - "ManufacturersModelName": "DISCOVERY_MR750w", - "InstitutionName": "TOKYO_UNIV_HOSPITAL", - "DeviceSerialNumber": "0000000000EM0204", - "StationName": "MRX07", - "PatientPosition": "HFS", - "SoftwareVersions": "24_LX_MR_Software_release:DV24.0_R01_1344.a", - "MRAcquisitionType": "3D", - "SeriesDescription": "T1w", - "ProtocolName": "T1w", - "ScanningSequence": "GR", - "SequenceVariant": "SS_SP_SK", - "ScanOptions": "FAST_GEMS_EDR_GEMS_FILTERED_GEMS_ACC_GEMS", - "ImageType": ["ORIGINAL", "PRIMARY", "OTHER"], - "SeriesNumber": 4, - "AcquisitionTime": "13:05:3.000000", - "AcquisitionNumber": 1, - "SliceThickness": 1, - "SpacingBetweenSlices": 0.500001, - "SAR": 0.0472471, - "EchoTime": 0.001856, - "RepetitionTime": 0.004824, - "InversionTime": 1, - "FlipAngle": 9, - "CoilString": "Head+Neck_40", - "PercentPhaseFOV": 80, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 320, - "PixelBandwidth": 892.875, - "ImageOrientationPatientDICOM": [ - -0.0779846, - 0.996937, - -0.00586877, - 0.00474381, - -0.00551558, - -0.999974 ], - "InPlanePhaseEncodingDirectionDICOM": "ROW", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 127.772, + "Manufacturer": "GE", + "ManufacturersModelName": "DISCOVERY_MR750w", + "InstitutionName": "TOKYO_UNIV_HOSPITAL", + "DeviceSerialNumber": "0000000000EM0204", + "StationName": "MRX07", + "PatientPosition": "HFS", + "SoftwareVersions": "24_LX_MR_Software_release:DV24.0_R01_1344.a", + "MRAcquisitionType": "3D", + "SeriesDescription": "T1w", + "ProtocolName": "T1w", + "ScanningSequence": "GR", + "SequenceVariant": "SS_SP_SK", + "ScanOptions": "FAST_GEMS_EDR_GEMS_FILTERED_GEMS_ACC_GEMS", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "OTHER" + ], + "SeriesNumber": 4, + "AcquisitionTime": "13:05:3.000000", + "AcquisitionNumber": 1, + "SliceThickness": 1, + "SpacingBetweenSlices": 0.500001, + "SAR": 0.0472471, + "EchoTime": 0.001856, + "RepetitionTime": 0.004824, + "InversionTime": 1, + "FlipAngle": 9, + "CoilString": "Head+Neck_40", + "PercentPhaseFOV": 80, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 320, + "PixelBandwidth": 892.875, + "ImageOrientationPatientDICOM": [ + -0.0779846, + 0.996937, + -0.00586877, + 0.00474381, + -0.00551558, + -0.999974 + ], + "InPlanePhaseEncodingDirectionDICOM": "ROW", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-tokyo750w05/anat/sub-tokyo750w05_space-other_T2star.json b/derivatives/data_preprocessed/sub-tokyo750w05/anat/sub-tokyo750w05_space-other_T2star.json index b7250f704b..0e19f71465 100644 --- a/derivatives/data_preprocessed/sub-tokyo750w05/anat/sub-tokyo750w05_space-other_T2star.json +++ b/derivatives/data_preprocessed/sub-tokyo750w05/anat/sub-tokyo750w05_space-other_T2star.json @@ -48,5 +48,9 @@ "InPlanePhaseEncodingDirectionDICOM": "ROW", "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0", - "AcquisitionDuration": 288.0 + "AcquisitionDuration": 288.0, + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-tokyo750w05/anat/sub-tokyo750w05_space-other_T2w.json b/derivatives/data_preprocessed/sub-tokyo750w05/anat/sub-tokyo750w05_space-other_T2w.json index 15710f2ec6..7e83ac44e8 100644 --- a/derivatives/data_preprocessed/sub-tokyo750w05/anat/sub-tokyo750w05_space-other_T2w.json +++ b/derivatives/data_preprocessed/sub-tokyo750w05/anat/sub-tokyo750w05_space-other_T2w.json @@ -1,44 +1,53 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 127.771, - "Manufacturer": "GE", - "ManufacturersModelName": "DISCOVERY_MR750w", - "InstitutionName": "TOKYO_UNIV_HOSPITAL", - "DeviceSerialNumber": "0000000000EM0204", - "StationName": "MRX07", - "PatientPosition": "HFS", - "SoftwareVersions": "24_LX_MR_Software_release:DV24.0_R01_1344.a", - "MRAcquisitionType": "3D", - "SeriesDescription": "T2w", - "ProtocolName": "T2w", - "ScanningSequence": "SE", - "SequenceVariant": "SK_OSP", - "ScanOptions": "FC_FREQ_AX_GEMS_FC_NPW_EDR_GEMS_FILTERED_GEMS_ACC_GEMS", - "ImageType": ["ORIGINAL", "PRIMARY", "OTHER"], - "SeriesNumber": 5, - "AcquisitionTime": "13:11:8.000000", - "AcquisitionNumber": 1, - "SliceThickness": 0.8, - "SpacingBetweenSlices": 0.8, - "SAR": 0.338966, - "EchoTime": 0.126597, - "RepetitionTime": 2.52, - "FlipAngle": 90, - "CoilString": "Head+Neck_40", - "PercentPhaseFOV": 100, - "EchoTrainLength": 78, - "AcquisitionMatrixPE": 320, - "ReconMatrixPE": 320, - "PixelBandwidth": 520.812, - "ImageOrientationPatientDICOM": [ - -0.085984, - 0.996277, - -0.00619832, - -0.00161844, - -0.00636113, - -0.999978 ], - "InPlanePhaseEncodingDirectionDICOM": "ROW", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 127.771, + "Manufacturer": "GE", + "ManufacturersModelName": "DISCOVERY_MR750w", + "InstitutionName": "TOKYO_UNIV_HOSPITAL", + "DeviceSerialNumber": "0000000000EM0204", + "StationName": "MRX07", + "PatientPosition": "HFS", + "SoftwareVersions": "24_LX_MR_Software_release:DV24.0_R01_1344.a", + "MRAcquisitionType": "3D", + "SeriesDescription": "T2w", + "ProtocolName": "T2w", + "ScanningSequence": "SE", + "SequenceVariant": "SK_OSP", + "ScanOptions": "FC_FREQ_AX_GEMS_FC_NPW_EDR_GEMS_FILTERED_GEMS_ACC_GEMS", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "OTHER" + ], + "SeriesNumber": 5, + "AcquisitionTime": "13:11:8.000000", + "AcquisitionNumber": 1, + "SliceThickness": 0.8, + "SpacingBetweenSlices": 0.8, + "SAR": 0.338966, + "EchoTime": 0.126597, + "RepetitionTime": 2.52, + "FlipAngle": 90, + "CoilString": "Head+Neck_40", + "PercentPhaseFOV": 100, + "EchoTrainLength": 78, + "AcquisitionMatrixPE": 320, + "ReconMatrixPE": 320, + "PixelBandwidth": 520.812, + "ImageOrientationPatientDICOM": [ + -0.085984, + 0.996277, + -0.00619832, + -0.00161844, + -0.00636113, + -0.999978 + ], + "InPlanePhaseEncodingDirectionDICOM": "ROW", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-tokyo750w06/anat/sub-tokyo750w06_flip-1_mt-on_space-other_MTS.json b/derivatives/data_preprocessed/sub-tokyo750w06/anat/sub-tokyo750w06_flip-1_mt-on_space-other_MTS.json index 2a35a0dcc4..596bd4e4b9 100644 --- a/derivatives/data_preprocessed/sub-tokyo750w06/anat/sub-tokyo750w06_flip-1_mt-on_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-tokyo750w06/anat/sub-tokyo750w06_flip-1_mt-on_space-other_MTS.json @@ -1,43 +1,51 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 127.771, - "Manufacturer": "GE", - "ManufacturersModelName": "DISCOVERY_MR750w", - "InstitutionName": "TOKYO_UNIV_HOSPITAL", - "DeviceSerialNumber": "0000000000EM0204", - "StationName": "MRX07", - "PatientPosition": "HFS", - "SoftwareVersions": "24_LX_MR_Software_release:DV24.0_R01_1344.a", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-MT1", - "ProtocolName": "GRE-MT1", - "ScanningSequence": "GR", - "SequenceVariant": "SS_SP", - "ScanOptions": "EDR_GEMS_MT_GEMS_FILTERED_GEMS_PFF", - "ImageType": ["ORIGINAL", "PRIMARY", "OTHER"], - "SeriesNumber": 8, - "AcquisitionTime": "17:50:35.000000", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SpacingBetweenSlices": 5, - "SAR": 0.647599, - "EchoTime": 0.004, - "RepetitionTime": 0.035, - "FlipAngle": 9, - "CoilString": "Head+Neck_40", - "PercentPhaseFOV": 100, - "AcquisitionMatrixPE": 192, - "ReconMatrixPE": 192, - "PixelBandwidth": 434.062, - "ImageOrientationPatientDICOM": [ - 0.997906, - 0.0642832, - 0.00711526, - -0.0643397, - 0.997896, - 0.00801846 ], - "InPlanePhaseEncodingDirectionDICOM": "ROW", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 127.771, + "Manufacturer": "GE", + "ManufacturersModelName": "DISCOVERY_MR750w", + "InstitutionName": "TOKYO_UNIV_HOSPITAL", + "DeviceSerialNumber": "0000000000EM0204", + "StationName": "MRX07", + "PatientPosition": "HFS", + "SoftwareVersions": "24_LX_MR_Software_release:DV24.0_R01_1344.a", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-MT1", + "ProtocolName": "GRE-MT1", + "ScanningSequence": "GR", + "SequenceVariant": "SS_SP", + "ScanOptions": "EDR_GEMS_MT_GEMS_FILTERED_GEMS_PFF", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "OTHER" + ], + "SeriesNumber": 8, + "AcquisitionTime": "17:50:35.000000", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SpacingBetweenSlices": 5, + "SAR": 0.647599, + "EchoTime": 0.004, + "RepetitionTime": 0.035, + "FlipAngle": 9, + "CoilString": "Head+Neck_40", + "PercentPhaseFOV": 100, + "AcquisitionMatrixPE": 192, + "ReconMatrixPE": 192, + "PixelBandwidth": 434.062, + "ImageOrientationPatientDICOM": [ + 0.997906, + 0.0642832, + 0.00711526, + -0.0643397, + 0.997896, + 0.00801846 + ], + "InPlanePhaseEncodingDirectionDICOM": "ROW", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-tokyo750w06/anat/sub-tokyo750w06_flip-2_mt-off_space-other_MTS.json b/derivatives/data_preprocessed/sub-tokyo750w06/anat/sub-tokyo750w06_flip-2_mt-off_space-other_MTS.json index c968600def..a00802eb36 100644 --- a/derivatives/data_preprocessed/sub-tokyo750w06/anat/sub-tokyo750w06_flip-2_mt-off_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-tokyo750w06/anat/sub-tokyo750w06_flip-2_mt-off_space-other_MTS.json @@ -1,43 +1,51 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 127.771, - "Manufacturer": "GE", - "ManufacturersModelName": "DISCOVERY_MR750w", - "InstitutionName": "TOKYO_UNIV_HOSPITAL", - "DeviceSerialNumber": "0000000000EM0204", - "StationName": "MRX07", - "PatientPosition": "HFS", - "SoftwareVersions": "24_LX_MR_Software_release:DV24.0_R01_1344.a", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-T1w", - "ProtocolName": "GRE-T1w", - "ScanningSequence": "GR", - "SequenceVariant": "SS_SP", - "ScanOptions": "EDR_GEMS_FILTERED_GEMS_PFF", - "ImageType": ["ORIGINAL", "PRIMARY", "OTHER"], - "SeriesNumber": 9, - "AcquisitionTime": "17:54:47.000000", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SpacingBetweenSlices": 5, - "SAR": 0.0103476, - "EchoTime": 0.004, - "RepetitionTime": 0.015, - "FlipAngle": 15, - "CoilString": "Head+Neck_40", - "PercentPhaseFOV": 100, - "AcquisitionMatrixPE": 192, - "ReconMatrixPE": 192, - "PixelBandwidth": 434.062, - "ImageOrientationPatientDICOM": [ - 0.997906, - 0.0642832, - 0.00711526, - -0.0643397, - 0.997896, - 0.00801846 ], - "InPlanePhaseEncodingDirectionDICOM": "ROW", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 127.771, + "Manufacturer": "GE", + "ManufacturersModelName": "DISCOVERY_MR750w", + "InstitutionName": "TOKYO_UNIV_HOSPITAL", + "DeviceSerialNumber": "0000000000EM0204", + "StationName": "MRX07", + "PatientPosition": "HFS", + "SoftwareVersions": "24_LX_MR_Software_release:DV24.0_R01_1344.a", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-T1w", + "ProtocolName": "GRE-T1w", + "ScanningSequence": "GR", + "SequenceVariant": "SS_SP", + "ScanOptions": "EDR_GEMS_FILTERED_GEMS_PFF", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "OTHER" + ], + "SeriesNumber": 9, + "AcquisitionTime": "17:54:47.000000", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SpacingBetweenSlices": 5, + "SAR": 0.0103476, + "EchoTime": 0.004, + "RepetitionTime": 0.015, + "FlipAngle": 15, + "CoilString": "Head+Neck_40", + "PercentPhaseFOV": 100, + "AcquisitionMatrixPE": 192, + "ReconMatrixPE": 192, + "PixelBandwidth": 434.062, + "ImageOrientationPatientDICOM": [ + 0.997906, + 0.0642832, + 0.00711526, + -0.0643397, + 0.997896, + 0.00801846 + ], + "InPlanePhaseEncodingDirectionDICOM": "ROW", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-tokyo750w06/anat/sub-tokyo750w06_space-other_T1w.json b/derivatives/data_preprocessed/sub-tokyo750w06/anat/sub-tokyo750w06_space-other_T1w.json index 60ceea4c0d..5e6940e89d 100644 --- a/derivatives/data_preprocessed/sub-tokyo750w06/anat/sub-tokyo750w06_space-other_T1w.json +++ b/derivatives/data_preprocessed/sub-tokyo750w06/anat/sub-tokyo750w06_space-other_T1w.json @@ -1,44 +1,53 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 127.771, - "Manufacturer": "GE", - "ManufacturersModelName": "DISCOVERY_MR750w", - "InstitutionName": "TOKYO_UNIV_HOSPITAL", - "DeviceSerialNumber": "0000000000EM0204", - "StationName": "MRX07", - "PatientPosition": "HFS", - "SoftwareVersions": "24_LX_MR_Software_release:DV24.0_R01_1344.a", - "MRAcquisitionType": "3D", - "SeriesDescription": "T1w", - "ProtocolName": "T1w", - "ScanningSequence": "GR", - "SequenceVariant": "SS_SP_SK", - "ScanOptions": "FAST_GEMS_EDR_GEMS_FILTERED_GEMS_ACC_GEMS", - "ImageType": ["ORIGINAL", "PRIMARY", "OTHER"], - "SeriesNumber": 4, - "AcquisitionTime": "17:28:57.000000", - "AcquisitionNumber": 1, - "SliceThickness": 1, - "SpacingBetweenSlices": 0.499998, - "SAR": 0.0472471, - "EchoTime": 0.001864, - "RepetitionTime": 0.004824, - "InversionTime": 1, - "FlipAngle": 9, - "CoilString": "Head+Neck_40", - "PercentPhaseFOV": 80, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 320, - "PixelBandwidth": 892.875, - "ImageOrientationPatientDICOM": [ - -0.0644098, - 0.997901, - -0.00669532, - -0.0098259, - -0.0073431, - -0.999925 ], - "InPlanePhaseEncodingDirectionDICOM": "ROW", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 127.771, + "Manufacturer": "GE", + "ManufacturersModelName": "DISCOVERY_MR750w", + "InstitutionName": "TOKYO_UNIV_HOSPITAL", + "DeviceSerialNumber": "0000000000EM0204", + "StationName": "MRX07", + "PatientPosition": "HFS", + "SoftwareVersions": "24_LX_MR_Software_release:DV24.0_R01_1344.a", + "MRAcquisitionType": "3D", + "SeriesDescription": "T1w", + "ProtocolName": "T1w", + "ScanningSequence": "GR", + "SequenceVariant": "SS_SP_SK", + "ScanOptions": "FAST_GEMS_EDR_GEMS_FILTERED_GEMS_ACC_GEMS", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "OTHER" + ], + "SeriesNumber": 4, + "AcquisitionTime": "17:28:57.000000", + "AcquisitionNumber": 1, + "SliceThickness": 1, + "SpacingBetweenSlices": 0.499998, + "SAR": 0.0472471, + "EchoTime": 0.001864, + "RepetitionTime": 0.004824, + "InversionTime": 1, + "FlipAngle": 9, + "CoilString": "Head+Neck_40", + "PercentPhaseFOV": 80, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 320, + "PixelBandwidth": 892.875, + "ImageOrientationPatientDICOM": [ + -0.0644098, + 0.997901, + -0.00669532, + -0.0098259, + -0.0073431, + -0.999925 + ], + "InPlanePhaseEncodingDirectionDICOM": "ROW", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-tokyo750w06/anat/sub-tokyo750w06_space-other_T2star.json b/derivatives/data_preprocessed/sub-tokyo750w06/anat/sub-tokyo750w06_space-other_T2star.json index aff0ec2f47..07f847054b 100644 --- a/derivatives/data_preprocessed/sub-tokyo750w06/anat/sub-tokyo750w06_space-other_T2star.json +++ b/derivatives/data_preprocessed/sub-tokyo750w06/anat/sub-tokyo750w06_space-other_T2star.json @@ -48,5 +48,9 @@ "InPlanePhaseEncodingDirectionDICOM": "ROW", "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0", - "AcquisitionDuration": 288.0 + "AcquisitionDuration": 288.0, + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-tokyo750w06/anat/sub-tokyo750w06_space-other_T2w.json b/derivatives/data_preprocessed/sub-tokyo750w06/anat/sub-tokyo750w06_space-other_T2w.json index fbb4f837bb..4ab943cd38 100644 --- a/derivatives/data_preprocessed/sub-tokyo750w06/anat/sub-tokyo750w06_space-other_T2w.json +++ b/derivatives/data_preprocessed/sub-tokyo750w06/anat/sub-tokyo750w06_space-other_T2w.json @@ -1,44 +1,53 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 127.772, - "Manufacturer": "GE", - "ManufacturersModelName": "DISCOVERY_MR750w", - "InstitutionName": "TOKYO_UNIV_HOSPITAL", - "DeviceSerialNumber": "0000000000EM0204", - "StationName": "MRX07", - "PatientPosition": "HFS", - "SoftwareVersions": "24_LX_MR_Software_release:DV24.0_R01_1344.a", - "MRAcquisitionType": "3D", - "SeriesDescription": "T2w", - "ProtocolName": "T2w", - "ScanningSequence": "SE", - "SequenceVariant": "SK_OSP", - "ScanOptions": "FC_FREQ_AX_GEMS_FC_NPW_EDR_GEMS_FILTERED_GEMS_ACC_GEMS", - "ImageType": ["ORIGINAL", "PRIMARY", "OTHER"], - "SeriesNumber": 5, - "AcquisitionTime": "17:35:35.000000", - "AcquisitionNumber": 1, - "SliceThickness": 0.8, - "SpacingBetweenSlices": 0.8, - "SAR": 0.338966, - "EchoTime": 0.130887, - "RepetitionTime": 2.52, - "FlipAngle": 90, - "CoilString": "Head+Neck_40", - "PercentPhaseFOV": 100, - "EchoTrainLength": 78, - "AcquisitionMatrixPE": 320, - "ReconMatrixPE": 320, - "PixelBandwidth": 520.812, - "ImageOrientationPatientDICOM": [ - -0.0549648, - 0.998475, - -0.00520965, - 0.00535718, - -0.00492257, - -0.999974 ], - "InPlanePhaseEncodingDirectionDICOM": "ROW", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 127.772, + "Manufacturer": "GE", + "ManufacturersModelName": "DISCOVERY_MR750w", + "InstitutionName": "TOKYO_UNIV_HOSPITAL", + "DeviceSerialNumber": "0000000000EM0204", + "StationName": "MRX07", + "PatientPosition": "HFS", + "SoftwareVersions": "24_LX_MR_Software_release:DV24.0_R01_1344.a", + "MRAcquisitionType": "3D", + "SeriesDescription": "T2w", + "ProtocolName": "T2w", + "ScanningSequence": "SE", + "SequenceVariant": "SK_OSP", + "ScanOptions": "FC_FREQ_AX_GEMS_FC_NPW_EDR_GEMS_FILTERED_GEMS_ACC_GEMS", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "OTHER" + ], + "SeriesNumber": 5, + "AcquisitionTime": "17:35:35.000000", + "AcquisitionNumber": 1, + "SliceThickness": 0.8, + "SpacingBetweenSlices": 0.8, + "SAR": 0.338966, + "EchoTime": 0.130887, + "RepetitionTime": 2.52, + "FlipAngle": 90, + "CoilString": "Head+Neck_40", + "PercentPhaseFOV": 100, + "EchoTrainLength": 78, + "AcquisitionMatrixPE": 320, + "ReconMatrixPE": 320, + "PixelBandwidth": 520.812, + "ImageOrientationPatientDICOM": [ + -0.0549648, + 0.998475, + -0.00520965, + 0.00535718, + -0.00492257, + -0.999974 + ], + "InPlanePhaseEncodingDirectionDICOM": "ROW", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-tokyo750w07/anat/sub-tokyo750w07_flip-1_mt-on_space-other_MTS.json b/derivatives/data_preprocessed/sub-tokyo750w07/anat/sub-tokyo750w07_flip-1_mt-on_space-other_MTS.json index 2cb65607d2..b069fcf952 100644 --- a/derivatives/data_preprocessed/sub-tokyo750w07/anat/sub-tokyo750w07_flip-1_mt-on_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-tokyo750w07/anat/sub-tokyo750w07_flip-1_mt-on_space-other_MTS.json @@ -1,43 +1,51 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 127.771, - "Manufacturer": "GE", - "ManufacturersModelName": "DISCOVERY_MR750w", - "InstitutionName": "TOKYO_UNIV_HOSPITAL", - "DeviceSerialNumber": "0000000000EM0204", - "StationName": "MRX07", - "PatientPosition": "HFS", - "SoftwareVersions": "24_LX_MR_Software_release:DV24.0_R01_1344.a", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-MT1", - "ProtocolName": "GRE-MT1", - "ScanningSequence": "GR", - "SequenceVariant": "SS_SP", - "ScanOptions": "EDR_GEMS_MT_GEMS_FILTERED_GEMS_PFF", - "ImageType": ["ORIGINAL", "PRIMARY", "OTHER"], - "SeriesNumber": 8, - "AcquisitionTime": "17:57:15.000000", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SpacingBetweenSlices": 5, - "SAR": 0.933571, - "EchoTime": 0.004, - "RepetitionTime": 0.035, - "FlipAngle": 9, - "CoilString": "Head+Neck_40", - "PercentPhaseFOV": 100, - "AcquisitionMatrixPE": 192, - "ReconMatrixPE": 192, - "PixelBandwidth": 434.062, - "ImageOrientationPatientDICOM": [ - 0.999738, - -0.00165148, - 0.0228436, - 0.00337188, - 0.997142, - -0.0754794 ], - "InPlanePhaseEncodingDirectionDICOM": "ROW", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 127.771, + "Manufacturer": "GE", + "ManufacturersModelName": "DISCOVERY_MR750w", + "InstitutionName": "TOKYO_UNIV_HOSPITAL", + "DeviceSerialNumber": "0000000000EM0204", + "StationName": "MRX07", + "PatientPosition": "HFS", + "SoftwareVersions": "24_LX_MR_Software_release:DV24.0_R01_1344.a", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-MT1", + "ProtocolName": "GRE-MT1", + "ScanningSequence": "GR", + "SequenceVariant": "SS_SP", + "ScanOptions": "EDR_GEMS_MT_GEMS_FILTERED_GEMS_PFF", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "OTHER" + ], + "SeriesNumber": 8, + "AcquisitionTime": "17:57:15.000000", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SpacingBetweenSlices": 5, + "SAR": 0.933571, + "EchoTime": 0.004, + "RepetitionTime": 0.035, + "FlipAngle": 9, + "CoilString": "Head+Neck_40", + "PercentPhaseFOV": 100, + "AcquisitionMatrixPE": 192, + "ReconMatrixPE": 192, + "PixelBandwidth": 434.062, + "ImageOrientationPatientDICOM": [ + 0.999738, + -0.00165148, + 0.0228436, + 0.00337188, + 0.997142, + -0.0754794 + ], + "InPlanePhaseEncodingDirectionDICOM": "ROW", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-tokyo750w07/anat/sub-tokyo750w07_flip-2_mt-off_space-other_MTS.json b/derivatives/data_preprocessed/sub-tokyo750w07/anat/sub-tokyo750w07_flip-2_mt-off_space-other_MTS.json index 86fe070642..0e9f82043a 100644 --- a/derivatives/data_preprocessed/sub-tokyo750w07/anat/sub-tokyo750w07_flip-2_mt-off_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-tokyo750w07/anat/sub-tokyo750w07_flip-2_mt-off_space-other_MTS.json @@ -1,43 +1,51 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 127.771, - "Manufacturer": "GE", - "ManufacturersModelName": "DISCOVERY_MR750w", - "InstitutionName": "TOKYO_UNIV_HOSPITAL", - "DeviceSerialNumber": "0000000000EM0204", - "StationName": "MRX07", - "PatientPosition": "HFS", - "SoftwareVersions": "24_LX_MR_Software_release:DV24.0_R01_1344.a", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-T1w", - "ProtocolName": "GRE-T1w", - "ScanningSequence": "GR", - "SequenceVariant": "SS_SP", - "ScanOptions": "EDR_GEMS_FILTERED_GEMS_PFF", - "ImageType": ["ORIGINAL", "PRIMARY", "OTHER"], - "SeriesNumber": 9, - "AcquisitionTime": "18:01:35.000000", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SpacingBetweenSlices": 5, - "SAR": 0.014917, - "EchoTime": 0.004, - "RepetitionTime": 0.015, - "FlipAngle": 15, - "CoilString": "Head+Neck_40", - "PercentPhaseFOV": 100, - "AcquisitionMatrixPE": 192, - "ReconMatrixPE": 192, - "PixelBandwidth": 434.062, - "ImageOrientationPatientDICOM": [ - 0.999738, - -0.00165148, - 0.0228436, - 0.00337188, - 0.997142, - -0.0754794 ], - "InPlanePhaseEncodingDirectionDICOM": "ROW", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 127.771, + "Manufacturer": "GE", + "ManufacturersModelName": "DISCOVERY_MR750w", + "InstitutionName": "TOKYO_UNIV_HOSPITAL", + "DeviceSerialNumber": "0000000000EM0204", + "StationName": "MRX07", + "PatientPosition": "HFS", + "SoftwareVersions": "24_LX_MR_Software_release:DV24.0_R01_1344.a", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-T1w", + "ProtocolName": "GRE-T1w", + "ScanningSequence": "GR", + "SequenceVariant": "SS_SP", + "ScanOptions": "EDR_GEMS_FILTERED_GEMS_PFF", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "OTHER" + ], + "SeriesNumber": 9, + "AcquisitionTime": "18:01:35.000000", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SpacingBetweenSlices": 5, + "SAR": 0.014917, + "EchoTime": 0.004, + "RepetitionTime": 0.015, + "FlipAngle": 15, + "CoilString": "Head+Neck_40", + "PercentPhaseFOV": 100, + "AcquisitionMatrixPE": 192, + "ReconMatrixPE": 192, + "PixelBandwidth": 434.062, + "ImageOrientationPatientDICOM": [ + 0.999738, + -0.00165148, + 0.0228436, + 0.00337188, + 0.997142, + -0.0754794 + ], + "InPlanePhaseEncodingDirectionDICOM": "ROW", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-tokyo750w07/anat/sub-tokyo750w07_space-other_T1w.json b/derivatives/data_preprocessed/sub-tokyo750w07/anat/sub-tokyo750w07_space-other_T1w.json index ebd07659ce..752d902388 100644 --- a/derivatives/data_preprocessed/sub-tokyo750w07/anat/sub-tokyo750w07_space-other_T1w.json +++ b/derivatives/data_preprocessed/sub-tokyo750w07/anat/sub-tokyo750w07_space-other_T1w.json @@ -1,44 +1,53 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 127.771, - "Manufacturer": "GE", - "ManufacturersModelName": "DISCOVERY_MR750w", - "InstitutionName": "TOKYO_UNIV_HOSPITAL", - "DeviceSerialNumber": "0000000000EM0204", - "StationName": "MRX07", - "PatientPosition": "HFS", - "SoftwareVersions": "24_LX_MR_Software_release:DV24.0_R01_1344.a", - "MRAcquisitionType": "3D", - "SeriesDescription": "T1w", - "ProtocolName": "T1w", - "ScanningSequence": "GR", - "SequenceVariant": "SS_SP_SK", - "ScanOptions": "FAST_GEMS_EDR_GEMS_FILTERED_GEMS_ACC_GEMS", - "ImageType": ["ORIGINAL", "PRIMARY", "OTHER"], - "SeriesNumber": 4, - "AcquisitionTime": "17:36:41.000000", - "AcquisitionNumber": 1, - "SliceThickness": 1, - "SpacingBetweenSlices": 0.499999, - "SAR": 0.0681839, - "EchoTime": 0.001856, - "RepetitionTime": 0.004808, - "InversionTime": 1, - "FlipAngle": 9, - "CoilString": "Head+Neck_40", - "PercentPhaseFOV": 80, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 320, - "PixelBandwidth": 892.875, - "ImageOrientationPatientDICOM": [ - 4.59909e-05, - 0.999999, - -0.00154004, - 0.063107, - -0.00153985, - -0.998006 ], - "InPlanePhaseEncodingDirectionDICOM": "ROW", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 127.771, + "Manufacturer": "GE", + "ManufacturersModelName": "DISCOVERY_MR750w", + "InstitutionName": "TOKYO_UNIV_HOSPITAL", + "DeviceSerialNumber": "0000000000EM0204", + "StationName": "MRX07", + "PatientPosition": "HFS", + "SoftwareVersions": "24_LX_MR_Software_release:DV24.0_R01_1344.a", + "MRAcquisitionType": "3D", + "SeriesDescription": "T1w", + "ProtocolName": "T1w", + "ScanningSequence": "GR", + "SequenceVariant": "SS_SP_SK", + "ScanOptions": "FAST_GEMS_EDR_GEMS_FILTERED_GEMS_ACC_GEMS", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "OTHER" + ], + "SeriesNumber": 4, + "AcquisitionTime": "17:36:41.000000", + "AcquisitionNumber": 1, + "SliceThickness": 1, + "SpacingBetweenSlices": 0.499999, + "SAR": 0.0681839, + "EchoTime": 0.001856, + "RepetitionTime": 0.004808, + "InversionTime": 1, + "FlipAngle": 9, + "CoilString": "Head+Neck_40", + "PercentPhaseFOV": 80, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 320, + "PixelBandwidth": 892.875, + "ImageOrientationPatientDICOM": [ + 4.59909e-05, + 0.999999, + -0.00154004, + 0.063107, + -0.00153985, + -0.998006 + ], + "InPlanePhaseEncodingDirectionDICOM": "ROW", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-tokyo750w07/anat/sub-tokyo750w07_space-other_T2star.json b/derivatives/data_preprocessed/sub-tokyo750w07/anat/sub-tokyo750w07_space-other_T2star.json index 83a6b8ed07..f65a740536 100644 --- a/derivatives/data_preprocessed/sub-tokyo750w07/anat/sub-tokyo750w07_space-other_T2star.json +++ b/derivatives/data_preprocessed/sub-tokyo750w07/anat/sub-tokyo750w07_space-other_T2star.json @@ -48,5 +48,9 @@ "InPlanePhaseEncodingDirectionDICOM": "ROW", "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0", - "AcquisitionDuration": 288.0 + "AcquisitionDuration": 288.0, + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-tokyo750w07/anat/sub-tokyo750w07_space-other_T2w.json b/derivatives/data_preprocessed/sub-tokyo750w07/anat/sub-tokyo750w07_space-other_T2w.json index 5cd789dcc7..6cce93a64b 100644 --- a/derivatives/data_preprocessed/sub-tokyo750w07/anat/sub-tokyo750w07_space-other_T2w.json +++ b/derivatives/data_preprocessed/sub-tokyo750w07/anat/sub-tokyo750w07_space-other_T2w.json @@ -1,44 +1,53 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 127.771, - "Manufacturer": "GE", - "ManufacturersModelName": "DISCOVERY_MR750w", - "InstitutionName": "TOKYO_UNIV_HOSPITAL", - "DeviceSerialNumber": "0000000000EM0204", - "StationName": "MRX07", - "PatientPosition": "HFS", - "SoftwareVersions": "24_LX_MR_Software_release:DV24.0_R01_1344.a", - "MRAcquisitionType": "3D", - "SeriesDescription": "T2w", - "ProtocolName": "T2w", - "ScanningSequence": "SE", - "SequenceVariant": "SK_OSP", - "ScanOptions": "FC_FREQ_AX_GEMS_FC_NPW_EDR_GEMS_FILTERED_GEMS_ACC_GEMS", - "ImageType": ["ORIGINAL", "PRIMARY", "OTHER"], - "SeriesNumber": 5, - "AcquisitionTime": "17:43:8.000000", - "AcquisitionNumber": 1, - "SliceThickness": 0.8, - "SpacingBetweenSlices": 0.8, - "SAR": 0.437866, - "EchoTime": 0.131192, - "RepetitionTime": 2.52, - "FlipAngle": 90, - "CoilString": "Head+Neck_40", - "PercentPhaseFOV": 100, - "EchoTrainLength": 78, - "AcquisitionMatrixPE": 320, - "ReconMatrixPE": 320, - "PixelBandwidth": 520.812, - "ImageOrientationPatientDICOM": [ - 0.0353751, - 0.999373, - -0.00116414, - 0.0151308, - -0.0017004, - -0.999884 ], - "InPlanePhaseEncodingDirectionDICOM": "ROW", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 127.771, + "Manufacturer": "GE", + "ManufacturersModelName": "DISCOVERY_MR750w", + "InstitutionName": "TOKYO_UNIV_HOSPITAL", + "DeviceSerialNumber": "0000000000EM0204", + "StationName": "MRX07", + "PatientPosition": "HFS", + "SoftwareVersions": "24_LX_MR_Software_release:DV24.0_R01_1344.a", + "MRAcquisitionType": "3D", + "SeriesDescription": "T2w", + "ProtocolName": "T2w", + "ScanningSequence": "SE", + "SequenceVariant": "SK_OSP", + "ScanOptions": "FC_FREQ_AX_GEMS_FC_NPW_EDR_GEMS_FILTERED_GEMS_ACC_GEMS", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "OTHER" + ], + "SeriesNumber": 5, + "AcquisitionTime": "17:43:8.000000", + "AcquisitionNumber": 1, + "SliceThickness": 0.8, + "SpacingBetweenSlices": 0.8, + "SAR": 0.437866, + "EchoTime": 0.131192, + "RepetitionTime": 2.52, + "FlipAngle": 90, + "CoilString": "Head+Neck_40", + "PercentPhaseFOV": 100, + "EchoTrainLength": 78, + "AcquisitionMatrixPE": 320, + "ReconMatrixPE": 320, + "PixelBandwidth": 520.812, + "ImageOrientationPatientDICOM": [ + 0.0353751, + 0.999373, + -0.00116414, + 0.0151308, + -0.0017004, + -0.999884 + ], + "InPlanePhaseEncodingDirectionDICOM": "ROW", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-tokyoIngenia01/anat/sub-tokyoIngenia01_flip-1_mt-on_space-other_MTS.json b/derivatives/data_preprocessed/sub-tokyoIngenia01/anat/sub-tokyoIngenia01_flip-1_mt-on_space-other_MTS.json index f67f29da62..97e7312712 100644 --- a/derivatives/data_preprocessed/sub-tokyoIngenia01/anat/sub-tokyoIngenia01_flip-1_mt-on_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-tokyoIngenia01/anat/sub-tokyoIngenia01_flip-1_mt-on_space-other_MTS.json @@ -1,50 +1,61 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 127.763, - "Manufacturer": "Philips", - "ManufacturersModelName": "Ingenia_CX", - "InstitutionName": "Tokyo_University_Hospital", - "InstitutionalDepartmentName": "Radiology", - "DeviceSerialNumber": "78091", - "StationName": "HOST-77RBK8NK2K", - "BodyPartExamined": "SPINE", - "PatientPosition": "HFS", - "SoftwareVersions": "5.3.1_5.3.1.1", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-MT", - "ProtocolName": "GRE-MT", - "ScanningSequence": "GR", - "SequenceVariant": "SP", - "ScanOptions": "PFF", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "FFE", "M", "FFE"], - "SeriesNumber": 601, - "AcquisitionTime": "19:21:54.100000", - "AcquisitionNumber": 6, - "PhilipsRescaleSlope": 2.12527, - "PhilipsRescaleIntercept": 0, - "PhilipsScaleSlope": 0.000702185, - "UsePhilipsFloatNotDisplayScaling": 1, - "SliceThickness": 5, - "SpacingBetweenSlices": 5, - "SAR": 2.35918, - "EchoTime": 0.002001, - "RepetitionTime": 0.057, - "FlipAngle": 9, - "CoilString": "MULTI_COIL", - "PercentPhaseFOV": 100, - "PhaseEncodingSteps": 256, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 256, - "PixelBandwidth": 261, - "ImageOrientationPatientDICOM": [ - 0.99921, - 0.00119292, - 0.0397114, - -0.00881131, - 0.98131, - 0.19223 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 127.763, + "Manufacturer": "Philips", + "ManufacturersModelName": "Ingenia_CX", + "InstitutionName": "Tokyo_University_Hospital", + "InstitutionalDepartmentName": "Radiology", + "DeviceSerialNumber": "78091", + "StationName": "HOST-77RBK8NK2K", + "BodyPartExamined": "SPINE", + "PatientPosition": "HFS", + "SoftwareVersions": "5.3.1_5.3.1.1", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-MT", + "ProtocolName": "GRE-MT", + "ScanningSequence": "GR", + "SequenceVariant": "SP", + "ScanOptions": "PFF", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "FFE", + "M", + "FFE" + ], + "SeriesNumber": 601, + "AcquisitionTime": "19:21:54.100000", + "AcquisitionNumber": 6, + "PhilipsRescaleSlope": 2.12527, + "PhilipsRescaleIntercept": 0, + "PhilipsScaleSlope": 0.000702185, + "UsePhilipsFloatNotDisplayScaling": 1, + "SliceThickness": 5, + "SpacingBetweenSlices": 5, + "SAR": 2.35918, + "EchoTime": 0.002001, + "RepetitionTime": 0.057, + "FlipAngle": 9, + "CoilString": "MULTI_COIL", + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 256, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "PixelBandwidth": 261, + "ImageOrientationPatientDICOM": [ + 0.99921, + 0.00119292, + 0.0397114, + -0.00881131, + 0.98131, + 0.19223 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-tokyoIngenia01/anat/sub-tokyoIngenia01_flip-2_mt-off_space-other_MTS.json b/derivatives/data_preprocessed/sub-tokyoIngenia01/anat/sub-tokyoIngenia01_flip-2_mt-off_space-other_MTS.json index 79bc3079c8..28eea54c2c 100644 --- a/derivatives/data_preprocessed/sub-tokyoIngenia01/anat/sub-tokyoIngenia01_flip-2_mt-off_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-tokyoIngenia01/anat/sub-tokyoIngenia01_flip-2_mt-off_space-other_MTS.json @@ -1,50 +1,61 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 127.763, - "Manufacturer": "Philips", - "ManufacturersModelName": "Ingenia_CX", - "InstitutionName": "Tokyo_University_Hospital", - "InstitutionalDepartmentName": "Radiology", - "DeviceSerialNumber": "78091", - "StationName": "HOST-77RBK8NK2K", - "BodyPartExamined": "SPINE", - "PatientPosition": "HFS", - "SoftwareVersions": "5.3.1_5.3.1.1", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-T1", - "ProtocolName": "GRE-T1", - "ScanningSequence": "GR", - "SequenceVariant": "SP", - "ScanOptions": "PFF", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "FFE", "M", "FFE"], - "SeriesNumber": 701, - "AcquisitionTime": "19:26:20.040000", - "AcquisitionNumber": 7, - "PhilipsRescaleSlope": 2.33602, - "PhilipsRescaleIntercept": 0, - "PhilipsScaleSlope": 0.000702185, - "UsePhilipsFloatNotDisplayScaling": 1, - "SliceThickness": 5, - "SpacingBetweenSlices": 5, - "SAR": 0.284064, - "EchoTime": 0.002001, - "RepetitionTime": 0.015, - "FlipAngle": 15, - "CoilString": "MULTI_COIL", - "PercentPhaseFOV": 100, - "PhaseEncodingSteps": 256, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 256, - "PixelBandwidth": 261, - "ImageOrientationPatientDICOM": [ - 0.99921, - 0.00119292, - 0.0397114, - -0.00881131, - 0.98131, - 0.19223 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 127.763, + "Manufacturer": "Philips", + "ManufacturersModelName": "Ingenia_CX", + "InstitutionName": "Tokyo_University_Hospital", + "InstitutionalDepartmentName": "Radiology", + "DeviceSerialNumber": "78091", + "StationName": "HOST-77RBK8NK2K", + "BodyPartExamined": "SPINE", + "PatientPosition": "HFS", + "SoftwareVersions": "5.3.1_5.3.1.1", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-T1", + "ProtocolName": "GRE-T1", + "ScanningSequence": "GR", + "SequenceVariant": "SP", + "ScanOptions": "PFF", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "FFE", + "M", + "FFE" + ], + "SeriesNumber": 701, + "AcquisitionTime": "19:26:20.040000", + "AcquisitionNumber": 7, + "PhilipsRescaleSlope": 2.33602, + "PhilipsRescaleIntercept": 0, + "PhilipsScaleSlope": 0.000702185, + "UsePhilipsFloatNotDisplayScaling": 1, + "SliceThickness": 5, + "SpacingBetweenSlices": 5, + "SAR": 0.284064, + "EchoTime": 0.002001, + "RepetitionTime": 0.015, + "FlipAngle": 15, + "CoilString": "MULTI_COIL", + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 256, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "PixelBandwidth": 261, + "ImageOrientationPatientDICOM": [ + 0.99921, + 0.00119292, + 0.0397114, + -0.00881131, + 0.98131, + 0.19223 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-tokyoIngenia01/anat/sub-tokyoIngenia01_space-other_T1w.json b/derivatives/data_preprocessed/sub-tokyoIngenia01/anat/sub-tokyoIngenia01_space-other_T1w.json index fc3e4ade48..9323a508ae 100644 --- a/derivatives/data_preprocessed/sub-tokyoIngenia01/anat/sub-tokyoIngenia01_space-other_T1w.json +++ b/derivatives/data_preprocessed/sub-tokyoIngenia01/anat/sub-tokyoIngenia01_space-other_T1w.json @@ -1,51 +1,63 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 127.762, - "Manufacturer": "Philips", - "ManufacturersModelName": "Ingenia_CX", - "InstitutionName": "Tokyo_University_Hospital", - "InstitutionalDepartmentName": "Radiology", - "DeviceSerialNumber": "78091", - "StationName": "HOST-77RBK8NK2K", - "BodyPartExamined": "SPINE", - "PatientPosition": "HFS", - "SoftwareVersions": "5.3.1_5.3.1.1", - "MRAcquisitionType": "3D", - "SeriesDescription": "T1w", - "ProtocolName": "T1w", - "ScanningSequence": "GR", - "SequenceVariant": "MP", - "ScanOptions": "OTHER", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "FFE", "M", "FFE"], - "SeriesNumber": 301, - "AcquisitionTime": "19:02:15.700000", - "AcquisitionNumber": 3, - "PhilipsRescaleSlope": 3.64347, - "PhilipsRescaleIntercept": 0, - "PhilipsScaleSlope": 0.00380749, - "UsePhilipsFloatNotDisplayScaling": 1, - "SliceThickness": 1, - "SpacingBetweenSlices": 1, - "SAR": 0.0334169, - "EchoTime": 0.003549, - "RepetitionTime": 0.0076249, - "FlipAngle": 9, - "CoilString": "MULTI_COIL", - "PercentPhaseFOV": 81.25, - "EchoTrainLength": 246, - "PhaseEncodingSteps": 320, - "AcquisitionMatrixPE": 320, - "ReconMatrixPE": 320, - "PixelBandwidth": 191, - "ImageOrientationPatientDICOM": [ - -0.00119412, - 0.999999, - 6.66941e-06, - 0.0397114, - 5.40845e-05, - -0.999211 ], - "InPlanePhaseEncodingDirectionDICOM": "ROW", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 127.762, + "Manufacturer": "Philips", + "ManufacturersModelName": "Ingenia_CX", + "InstitutionName": "Tokyo_University_Hospital", + "InstitutionalDepartmentName": "Radiology", + "DeviceSerialNumber": "78091", + "StationName": "HOST-77RBK8NK2K", + "BodyPartExamined": "SPINE", + "PatientPosition": "HFS", + "SoftwareVersions": "5.3.1_5.3.1.1", + "MRAcquisitionType": "3D", + "SeriesDescription": "T1w", + "ProtocolName": "T1w", + "ScanningSequence": "GR", + "SequenceVariant": "MP", + "ScanOptions": "OTHER", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "FFE", + "M", + "FFE" + ], + "SeriesNumber": 301, + "AcquisitionTime": "19:02:15.700000", + "AcquisitionNumber": 3, + "PhilipsRescaleSlope": 3.64347, + "PhilipsRescaleIntercept": 0, + "PhilipsScaleSlope": 0.00380749, + "UsePhilipsFloatNotDisplayScaling": 1, + "SliceThickness": 1, + "SpacingBetweenSlices": 1, + "SAR": 0.0334169, + "EchoTime": 0.003549, + "RepetitionTime": 0.0076249, + "FlipAngle": 9, + "CoilString": "MULTI_COIL", + "PercentPhaseFOV": 81.25, + "EchoTrainLength": 246, + "PhaseEncodingSteps": 320, + "AcquisitionMatrixPE": 320, + "ReconMatrixPE": 320, + "PixelBandwidth": 191, + "ImageOrientationPatientDICOM": [ + -0.00119412, + 0.999999, + 6.66941e-06, + 0.0397114, + 5.40845e-05, + -0.999211 + ], + "InPlanePhaseEncodingDirectionDICOM": "ROW", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-tokyoIngenia01/anat/sub-tokyoIngenia01_space-other_T2star.json b/derivatives/data_preprocessed/sub-tokyoIngenia01/anat/sub-tokyoIngenia01_space-other_T2star.json index 11c494bb72..8d9c79d1f5 100644 --- a/derivatives/data_preprocessed/sub-tokyoIngenia01/anat/sub-tokyoIngenia01_space-other_T2star.json +++ b/derivatives/data_preprocessed/sub-tokyoIngenia01/anat/sub-tokyoIngenia01_space-other_T2star.json @@ -58,5 +58,9 @@ "InPlanePhaseEncodingDirectionDICOM": "COL", "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0", - "AcquisitionDuration": 242.5 + "AcquisitionDuration": 242.5, + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-tokyoIngenia01/anat/sub-tokyoIngenia01_space-other_T2w.json b/derivatives/data_preprocessed/sub-tokyoIngenia01/anat/sub-tokyoIngenia01_space-other_T2w.json index eedfa762cb..96b142033a 100644 --- a/derivatives/data_preprocessed/sub-tokyoIngenia01/anat/sub-tokyoIngenia01_space-other_T2w.json +++ b/derivatives/data_preprocessed/sub-tokyoIngenia01/anat/sub-tokyoIngenia01_space-other_T2w.json @@ -1,51 +1,63 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 127.762, - "Manufacturer": "Philips", - "ManufacturersModelName": "Ingenia_CX", - "InstitutionName": "Tokyo_University_Hospital", - "InstitutionalDepartmentName": "Radiology", - "DeviceSerialNumber": "78091", - "StationName": "HOST-77RBK8NK2K", - "BodyPartExamined": "SPINE", - "PatientPosition": "HFS", - "SoftwareVersions": "5.3.1_5.3.1.1", - "MRAcquisitionType": "3D", - "SeriesDescription": "T2w", - "ProtocolName": "T2w", - "ScanningSequence": "SE", - "SequenceVariant": "SK", - "ScanOptions": "PFP", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "SE", "M", "SE"], - "SeriesNumber": 401, - "AcquisitionTime": "19:06:51.170000", - "AcquisitionNumber": 4, - "PhilipsRescaleSlope": 1.32723, - "PhilipsRescaleIntercept": 0, - "PhilipsScaleSlope": 0.00138801, - "UsePhilipsFloatNotDisplayScaling": 1, - "SliceThickness": 0.8, - "SpacingBetweenSlices": 0.8, - "SAR": 1.29942, - "EchoTime": 0.12, - "RepetitionTime": 3.5, - "FlipAngle": 90, - "CoilString": "MULTI_COIL", - "PercentPhaseFOV": 92.5, - "EchoTrainLength": 92, - "PhaseEncodingSteps": 316, - "AcquisitionMatrixPE": 316, - "ReconMatrixPE": 320, - "PixelBandwidth": 367, - "ImageOrientationPatientDICOM": [ - -0.00119412, - 0.999999, - 6.66941e-06, - 0.0397114, - 5.40845e-05, - -0.999211 ], - "InPlanePhaseEncodingDirectionDICOM": "ROW", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 127.762, + "Manufacturer": "Philips", + "ManufacturersModelName": "Ingenia_CX", + "InstitutionName": "Tokyo_University_Hospital", + "InstitutionalDepartmentName": "Radiology", + "DeviceSerialNumber": "78091", + "StationName": "HOST-77RBK8NK2K", + "BodyPartExamined": "SPINE", + "PatientPosition": "HFS", + "SoftwareVersions": "5.3.1_5.3.1.1", + "MRAcquisitionType": "3D", + "SeriesDescription": "T2w", + "ProtocolName": "T2w", + "ScanningSequence": "SE", + "SequenceVariant": "SK", + "ScanOptions": "PFP", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "SE", + "M", + "SE" + ], + "SeriesNumber": 401, + "AcquisitionTime": "19:06:51.170000", + "AcquisitionNumber": 4, + "PhilipsRescaleSlope": 1.32723, + "PhilipsRescaleIntercept": 0, + "PhilipsScaleSlope": 0.00138801, + "UsePhilipsFloatNotDisplayScaling": 1, + "SliceThickness": 0.8, + "SpacingBetweenSlices": 0.8, + "SAR": 1.29942, + "EchoTime": 0.12, + "RepetitionTime": 3.5, + "FlipAngle": 90, + "CoilString": "MULTI_COIL", + "PercentPhaseFOV": 92.5, + "EchoTrainLength": 92, + "PhaseEncodingSteps": 316, + "AcquisitionMatrixPE": 316, + "ReconMatrixPE": 320, + "PixelBandwidth": 367, + "ImageOrientationPatientDICOM": [ + -0.00119412, + 0.999999, + 6.66941e-06, + 0.0397114, + 5.40845e-05, + -0.999211 + ], + "InPlanePhaseEncodingDirectionDICOM": "ROW", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-tokyoIngenia02/anat/sub-tokyoIngenia02_flip-1_mt-on_space-other_MTS.json b/derivatives/data_preprocessed/sub-tokyoIngenia02/anat/sub-tokyoIngenia02_flip-1_mt-on_space-other_MTS.json index 2ca7e74cca..2a6b8b6cca 100644 --- a/derivatives/data_preprocessed/sub-tokyoIngenia02/anat/sub-tokyoIngenia02_flip-1_mt-on_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-tokyoIngenia02/anat/sub-tokyoIngenia02_flip-1_mt-on_space-other_MTS.json @@ -1,50 +1,61 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 127.763, - "Manufacturer": "Philips", - "ManufacturersModelName": "Ingenia_CX", - "InstitutionName": "Tokyo_University_Hospital", - "InstitutionalDepartmentName": "Radiology", - "DeviceSerialNumber": "78091", - "StationName": "HOST-77RBK8NK2K", - "BodyPartExamined": "SPINE", - "PatientPosition": "HFS", - "SoftwareVersions": "5.3.1_5.3.1.1", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-MT", - "ProtocolName": "GRE-MT", - "ScanningSequence": "GR", - "SequenceVariant": "SP", - "ScanOptions": "PFF", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "FFE", "M", "FFE"], - "SeriesNumber": 501, - "AcquisitionTime": "20:38:59.730000", - "AcquisitionNumber": 5, - "PhilipsRescaleSlope": 1.77973, - "PhilipsRescaleIntercept": 0, - "PhilipsScaleSlope": 0.000726611, - "UsePhilipsFloatNotDisplayScaling": 1, - "SliceThickness": 5, - "SpacingBetweenSlices": 5, - "SAR": 2.35918, - "EchoTime": 0.002001, - "RepetitionTime": 0.057, - "FlipAngle": 9, - "CoilString": "MULTI_COIL", - "PercentPhaseFOV": 100, - "PhaseEncodingSteps": 256, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 256, - "PixelBandwidth": 261, - "ImageOrientationPatientDICOM": [ - 0.999734, - -0.0230531, - -0.000654019, - 0.0230124, - 0.995296, - 0.0941126 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 127.763, + "Manufacturer": "Philips", + "ManufacturersModelName": "Ingenia_CX", + "InstitutionName": "Tokyo_University_Hospital", + "InstitutionalDepartmentName": "Radiology", + "DeviceSerialNumber": "78091", + "StationName": "HOST-77RBK8NK2K", + "BodyPartExamined": "SPINE", + "PatientPosition": "HFS", + "SoftwareVersions": "5.3.1_5.3.1.1", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-MT", + "ProtocolName": "GRE-MT", + "ScanningSequence": "GR", + "SequenceVariant": "SP", + "ScanOptions": "PFF", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "FFE", + "M", + "FFE" + ], + "SeriesNumber": 501, + "AcquisitionTime": "20:38:59.730000", + "AcquisitionNumber": 5, + "PhilipsRescaleSlope": 1.77973, + "PhilipsRescaleIntercept": 0, + "PhilipsScaleSlope": 0.000726611, + "UsePhilipsFloatNotDisplayScaling": 1, + "SliceThickness": 5, + "SpacingBetweenSlices": 5, + "SAR": 2.35918, + "EchoTime": 0.002001, + "RepetitionTime": 0.057, + "FlipAngle": 9, + "CoilString": "MULTI_COIL", + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 256, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "PixelBandwidth": 261, + "ImageOrientationPatientDICOM": [ + 0.999734, + -0.0230531, + -0.000654019, + 0.0230124, + 0.995296, + 0.0941126 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-tokyoIngenia02/anat/sub-tokyoIngenia02_flip-2_mt-off_space-other_MTS.json b/derivatives/data_preprocessed/sub-tokyoIngenia02/anat/sub-tokyoIngenia02_flip-2_mt-off_space-other_MTS.json index fb691366d3..b3091d92db 100644 --- a/derivatives/data_preprocessed/sub-tokyoIngenia02/anat/sub-tokyoIngenia02_flip-2_mt-off_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-tokyoIngenia02/anat/sub-tokyoIngenia02_flip-2_mt-off_space-other_MTS.json @@ -1,50 +1,61 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 127.763, - "Manufacturer": "Philips", - "ManufacturersModelName": "Ingenia_CX", - "InstitutionName": "Tokyo_University_Hospital", - "InstitutionalDepartmentName": "Radiology", - "DeviceSerialNumber": "78091", - "StationName": "HOST-77RBK8NK2K", - "BodyPartExamined": "SPINE", - "PatientPosition": "HFS", - "SoftwareVersions": "5.3.1_5.3.1.1", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-T1", - "ProtocolName": "GRE-T1", - "ScanningSequence": "GR", - "SequenceVariant": "SP", - "ScanOptions": "PFF", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "FFE", "M", "FFE"], - "SeriesNumber": 601, - "AcquisitionTime": "20:43:24.690000", - "AcquisitionNumber": 6, - "PhilipsRescaleSlope": 1.83761, - "PhilipsRescaleIntercept": 0, - "PhilipsScaleSlope": 0.000726611, - "UsePhilipsFloatNotDisplayScaling": 1, - "SliceThickness": 5, - "SpacingBetweenSlices": 5, - "SAR": 0.284064, - "EchoTime": 0.002001, - "RepetitionTime": 0.015, - "FlipAngle": 15, - "CoilString": "MULTI_COIL", - "PercentPhaseFOV": 100, - "PhaseEncodingSteps": 256, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 256, - "PixelBandwidth": 261, - "ImageOrientationPatientDICOM": [ - 0.999734, - -0.0230531, - -0.000654019, - 0.0230124, - 0.995296, - 0.0941126 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 127.763, + "Manufacturer": "Philips", + "ManufacturersModelName": "Ingenia_CX", + "InstitutionName": "Tokyo_University_Hospital", + "InstitutionalDepartmentName": "Radiology", + "DeviceSerialNumber": "78091", + "StationName": "HOST-77RBK8NK2K", + "BodyPartExamined": "SPINE", + "PatientPosition": "HFS", + "SoftwareVersions": "5.3.1_5.3.1.1", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-T1", + "ProtocolName": "GRE-T1", + "ScanningSequence": "GR", + "SequenceVariant": "SP", + "ScanOptions": "PFF", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "FFE", + "M", + "FFE" + ], + "SeriesNumber": 601, + "AcquisitionTime": "20:43:24.690000", + "AcquisitionNumber": 6, + "PhilipsRescaleSlope": 1.83761, + "PhilipsRescaleIntercept": 0, + "PhilipsScaleSlope": 0.000726611, + "UsePhilipsFloatNotDisplayScaling": 1, + "SliceThickness": 5, + "SpacingBetweenSlices": 5, + "SAR": 0.284064, + "EchoTime": 0.002001, + "RepetitionTime": 0.015, + "FlipAngle": 15, + "CoilString": "MULTI_COIL", + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 256, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "PixelBandwidth": 261, + "ImageOrientationPatientDICOM": [ + 0.999734, + -0.0230531, + -0.000654019, + 0.0230124, + 0.995296, + 0.0941126 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-tokyoIngenia02/anat/sub-tokyoIngenia02_space-other_T1w.json b/derivatives/data_preprocessed/sub-tokyoIngenia02/anat/sub-tokyoIngenia02_space-other_T1w.json index 8177d04288..40cc3f1b5b 100644 --- a/derivatives/data_preprocessed/sub-tokyoIngenia02/anat/sub-tokyoIngenia02_space-other_T1w.json +++ b/derivatives/data_preprocessed/sub-tokyoIngenia02/anat/sub-tokyoIngenia02_space-other_T1w.json @@ -1,51 +1,63 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 127.762, - "Manufacturer": "Philips", - "ManufacturersModelName": "Ingenia_CX", - "InstitutionName": "Tokyo_University_Hospital", - "InstitutionalDepartmentName": "Radiology", - "DeviceSerialNumber": "78091", - "StationName": "HOST-77RBK8NK2K", - "BodyPartExamined": "SPINE", - "PatientPosition": "HFS", - "SoftwareVersions": "5.3.1_5.3.1.1", - "MRAcquisitionType": "3D", - "SeriesDescription": "T1w", - "ProtocolName": "T1w", - "ScanningSequence": "GR", - "SequenceVariant": "MP", - "ScanOptions": "OTHER", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "FFE", "M", "FFE"], - "SeriesNumber": 201, - "AcquisitionTime": "20:19:46.060000", - "AcquisitionNumber": 2, - "PhilipsRescaleSlope": 3.24933, - "PhilipsRescaleIntercept": 0, - "PhilipsScaleSlope": 0.00399563, - "UsePhilipsFloatNotDisplayScaling": 1, - "SliceThickness": 1, - "SpacingBetweenSlices": 1, - "SAR": 0.0334169, - "EchoTime": 0.003556, - "RepetitionTime": 0.0076677, - "FlipAngle": 9, - "CoilString": "MULTI_COIL", - "PercentPhaseFOV": 81.25, - "EchoTrainLength": 246, - "PhaseEncodingSteps": 320, - "AcquisitionMatrixPE": 320, - "ReconMatrixPE": 320, - "PixelBandwidth": 191, - "ImageOrientationPatientDICOM": [ - 0.0230599, - 0.999734, - -8.66219e-05, - 0.0207916, - -0.000566206, - -0.999784 ], - "InPlanePhaseEncodingDirectionDICOM": "ROW", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 127.762, + "Manufacturer": "Philips", + "ManufacturersModelName": "Ingenia_CX", + "InstitutionName": "Tokyo_University_Hospital", + "InstitutionalDepartmentName": "Radiology", + "DeviceSerialNumber": "78091", + "StationName": "HOST-77RBK8NK2K", + "BodyPartExamined": "SPINE", + "PatientPosition": "HFS", + "SoftwareVersions": "5.3.1_5.3.1.1", + "MRAcquisitionType": "3D", + "SeriesDescription": "T1w", + "ProtocolName": "T1w", + "ScanningSequence": "GR", + "SequenceVariant": "MP", + "ScanOptions": "OTHER", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "FFE", + "M", + "FFE" + ], + "SeriesNumber": 201, + "AcquisitionTime": "20:19:46.060000", + "AcquisitionNumber": 2, + "PhilipsRescaleSlope": 3.24933, + "PhilipsRescaleIntercept": 0, + "PhilipsScaleSlope": 0.00399563, + "UsePhilipsFloatNotDisplayScaling": 1, + "SliceThickness": 1, + "SpacingBetweenSlices": 1, + "SAR": 0.0334169, + "EchoTime": 0.003556, + "RepetitionTime": 0.0076677, + "FlipAngle": 9, + "CoilString": "MULTI_COIL", + "PercentPhaseFOV": 81.25, + "EchoTrainLength": 246, + "PhaseEncodingSteps": 320, + "AcquisitionMatrixPE": 320, + "ReconMatrixPE": 320, + "PixelBandwidth": 191, + "ImageOrientationPatientDICOM": [ + 0.0230599, + 0.999734, + -8.66219e-05, + 0.0207916, + -0.000566206, + -0.999784 + ], + "InPlanePhaseEncodingDirectionDICOM": "ROW", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-tokyoIngenia02/anat/sub-tokyoIngenia02_space-other_T2star.json b/derivatives/data_preprocessed/sub-tokyoIngenia02/anat/sub-tokyoIngenia02_space-other_T2star.json index 5b639eabf3..9c5fe60d79 100644 --- a/derivatives/data_preprocessed/sub-tokyoIngenia02/anat/sub-tokyoIngenia02_space-other_T2star.json +++ b/derivatives/data_preprocessed/sub-tokyoIngenia02/anat/sub-tokyoIngenia02_space-other_T2star.json @@ -58,5 +58,9 @@ "InPlanePhaseEncodingDirectionDICOM": "COL", "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0", - "AcquisitionDuration": 242.5 + "AcquisitionDuration": 242.5, + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-tokyoIngenia02/anat/sub-tokyoIngenia02_space-other_T2w.json b/derivatives/data_preprocessed/sub-tokyoIngenia02/anat/sub-tokyoIngenia02_space-other_T2w.json index 1617506ff1..8033648ba8 100644 --- a/derivatives/data_preprocessed/sub-tokyoIngenia02/anat/sub-tokyoIngenia02_space-other_T2w.json +++ b/derivatives/data_preprocessed/sub-tokyoIngenia02/anat/sub-tokyoIngenia02_space-other_T2w.json @@ -1,51 +1,63 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 127.762, - "Manufacturer": "Philips", - "ManufacturersModelName": "Ingenia_CX", - "InstitutionName": "Tokyo_University_Hospital", - "InstitutionalDepartmentName": "Radiology", - "DeviceSerialNumber": "78091", - "StationName": "HOST-77RBK8NK2K", - "BodyPartExamined": "SPINE", - "PatientPosition": "HFS", - "SoftwareVersions": "5.3.1_5.3.1.1", - "MRAcquisitionType": "3D", - "SeriesDescription": "T2w", - "ProtocolName": "T2w", - "ScanningSequence": "SE", - "SequenceVariant": "SK", - "ScanOptions": "PFP", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "SE", "M", "SE"], - "SeriesNumber": 301, - "AcquisitionTime": "20:24:45.240000", - "AcquisitionNumber": 3, - "PhilipsRescaleSlope": 1.40635, - "PhilipsRescaleIntercept": 0, - "PhilipsScaleSlope": 0.0010553, - "UsePhilipsFloatNotDisplayScaling": 1, - "SliceThickness": 0.8, - "SpacingBetweenSlices": 0.8, - "SAR": 1.29942, - "EchoTime": 0.12, - "RepetitionTime": 3.5, - "FlipAngle": 90, - "CoilString": "MULTI_COIL", - "PercentPhaseFOV": 92.5, - "EchoTrainLength": 92, - "PhaseEncodingSteps": 316, - "AcquisitionMatrixPE": 316, - "ReconMatrixPE": 320, - "PixelBandwidth": 367, - "ImageOrientationPatientDICOM": [ - 0.0230599, - 0.999734, - -8.66219e-05, - 0.0207916, - -0.000566206, - -0.999784 ], - "InPlanePhaseEncodingDirectionDICOM": "ROW", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 127.762, + "Manufacturer": "Philips", + "ManufacturersModelName": "Ingenia_CX", + "InstitutionName": "Tokyo_University_Hospital", + "InstitutionalDepartmentName": "Radiology", + "DeviceSerialNumber": "78091", + "StationName": "HOST-77RBK8NK2K", + "BodyPartExamined": "SPINE", + "PatientPosition": "HFS", + "SoftwareVersions": "5.3.1_5.3.1.1", + "MRAcquisitionType": "3D", + "SeriesDescription": "T2w", + "ProtocolName": "T2w", + "ScanningSequence": "SE", + "SequenceVariant": "SK", + "ScanOptions": "PFP", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "SE", + "M", + "SE" + ], + "SeriesNumber": 301, + "AcquisitionTime": "20:24:45.240000", + "AcquisitionNumber": 3, + "PhilipsRescaleSlope": 1.40635, + "PhilipsRescaleIntercept": 0, + "PhilipsScaleSlope": 0.0010553, + "UsePhilipsFloatNotDisplayScaling": 1, + 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a/derivatives/data_preprocessed/sub-tokyoIngenia03/anat/sub-tokyoIngenia03_flip-1_mt-on_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-tokyoIngenia03/anat/sub-tokyoIngenia03_flip-1_mt-on_space-other_MTS.json @@ -1,50 +1,61 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 127.763, - "Manufacturer": "Philips", - "ManufacturersModelName": "Ingenia_CX", - "InstitutionName": "Tokyo_University_Hospital", - "InstitutionalDepartmentName": "Radiology", - "DeviceSerialNumber": "78091", - "StationName": "HOST-77RBK8NK2K", - "BodyPartExamined": "SPINE", - "PatientPosition": "HFS", - "SoftwareVersions": "5.3.1_5.3.1.1", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-MT", - "ProtocolName": "GRE-MT", - "ScanningSequence": "GR", - "SequenceVariant": "SP", - "ScanOptions": "PFF", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "FFE", "M", "FFE"], - "SeriesNumber": 701, - "AcquisitionTime": "19:11:55.560000", - "AcquisitionNumber": 7, - "PhilipsRescaleSlope": 1.82808, - "PhilipsRescaleIntercept": 0, - "PhilipsScaleSlope": 0.00075071, - "UsePhilipsFloatNotDisplayScaling": 1, - "SliceThickness": 5, - "SpacingBetweenSlices": 5, - "SAR": 2.35918, - "EchoTime": 0.002001, - "RepetitionTime": 0.057, - "FlipAngle": 9, - "CoilString": "MULTI_COIL", - "PercentPhaseFOV": 100, - "PhaseEncodingSteps": 256, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 256, - "PixelBandwidth": 261, - "ImageOrientationPatientDICOM": [ - 0.999983, - 0.0014552, - 0.0057145, - -0.00255723, - 0.980224, - 0.197875 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 127.763, + "Manufacturer": "Philips", + "ManufacturersModelName": "Ingenia_CX", + "InstitutionName": "Tokyo_University_Hospital", + "InstitutionalDepartmentName": "Radiology", + "DeviceSerialNumber": "78091", + "StationName": "HOST-77RBK8NK2K", + "BodyPartExamined": "SPINE", + "PatientPosition": "HFS", + "SoftwareVersions": "5.3.1_5.3.1.1", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-MT", + "ProtocolName": "GRE-MT", + "ScanningSequence": "GR", + "SequenceVariant": "SP", + "ScanOptions": "PFF", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "FFE", + "M", + "FFE" + ], + "SeriesNumber": 701, + "AcquisitionTime": "19:11:55.560000", + "AcquisitionNumber": 7, + "PhilipsRescaleSlope": 1.82808, + "PhilipsRescaleIntercept": 0, + "PhilipsScaleSlope": 0.00075071, + "UsePhilipsFloatNotDisplayScaling": 1, + "SliceThickness": 5, + "SpacingBetweenSlices": 5, + "SAR": 2.35918, + "EchoTime": 0.002001, + "RepetitionTime": 0.057, + "FlipAngle": 9, + "CoilString": "MULTI_COIL", + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 256, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "PixelBandwidth": 261, + "ImageOrientationPatientDICOM": [ + 0.999983, + 0.0014552, + 0.0057145, + -0.00255723, + 0.980224, + 0.197875 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-tokyoIngenia03/anat/sub-tokyoIngenia03_flip-2_mt-off_space-other_MTS.json b/derivatives/data_preprocessed/sub-tokyoIngenia03/anat/sub-tokyoIngenia03_flip-2_mt-off_space-other_MTS.json index c9e86a7976..34283fb65e 100644 --- a/derivatives/data_preprocessed/sub-tokyoIngenia03/anat/sub-tokyoIngenia03_flip-2_mt-off_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-tokyoIngenia03/anat/sub-tokyoIngenia03_flip-2_mt-off_space-other_MTS.json @@ -1,50 +1,61 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 127.763, - "Manufacturer": "Philips", - "ManufacturersModelName": "Ingenia_CX", - "InstitutionName": "Tokyo_University_Hospital", - "InstitutionalDepartmentName": "Radiology", - "DeviceSerialNumber": "78091", - "StationName": "HOST-77RBK8NK2K", - "BodyPartExamined": "SPINE", - "PatientPosition": "HFS", - "SoftwareVersions": "5.3.1_5.3.1.1", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-T1", - "ProtocolName": "GRE-T1", - "ScanningSequence": "GR", - "SequenceVariant": "SP", - "ScanOptions": "PFF", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "FFE", "M", "FFE"], - "SeriesNumber": 801, - "AcquisitionTime": "19:16:20.460000", - "AcquisitionNumber": 8, - "PhilipsRescaleSlope": 2.0735, - "PhilipsRescaleIntercept": 0, - "PhilipsScaleSlope": 0.00075071, - "UsePhilipsFloatNotDisplayScaling": 1, - "SliceThickness": 5, - "SpacingBetweenSlices": 5, - "SAR": 0.284064, - "EchoTime": 0.002001, - "RepetitionTime": 0.015, - "FlipAngle": 15, - "CoilString": "MULTI_COIL", - "PercentPhaseFOV": 100, - "PhaseEncodingSteps": 256, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 256, - "PixelBandwidth": 261, - "ImageOrientationPatientDICOM": [ - 0.999983, - 0.0014552, - 0.0057145, - -0.00255723, - 0.980224, - 0.197875 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 127.763, + "Manufacturer": "Philips", + "ManufacturersModelName": "Ingenia_CX", + "InstitutionName": "Tokyo_University_Hospital", + "InstitutionalDepartmentName": "Radiology", + "DeviceSerialNumber": "78091", + "StationName": "HOST-77RBK8NK2K", + "BodyPartExamined": "SPINE", + "PatientPosition": "HFS", + "SoftwareVersions": "5.3.1_5.3.1.1", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-T1", + "ProtocolName": "GRE-T1", + "ScanningSequence": "GR", + "SequenceVariant": "SP", + "ScanOptions": "PFF", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "FFE", + "M", + "FFE" + ], + "SeriesNumber": 801, + "AcquisitionTime": "19:16:20.460000", + "AcquisitionNumber": 8, + "PhilipsRescaleSlope": 2.0735, + "PhilipsRescaleIntercept": 0, + "PhilipsScaleSlope": 0.00075071, + "UsePhilipsFloatNotDisplayScaling": 1, + "SliceThickness": 5, + "SpacingBetweenSlices": 5, + "SAR": 0.284064, + "EchoTime": 0.002001, + "RepetitionTime": 0.015, + "FlipAngle": 15, + "CoilString": "MULTI_COIL", + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 256, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "PixelBandwidth": 261, + "ImageOrientationPatientDICOM": [ + 0.999983, + 0.0014552, + 0.0057145, + -0.00255723, + 0.980224, + 0.197875 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-tokyoIngenia03/anat/sub-tokyoIngenia03_space-other_T1w.json b/derivatives/data_preprocessed/sub-tokyoIngenia03/anat/sub-tokyoIngenia03_space-other_T1w.json index b2f4d6d483..5d67a080c4 100644 --- a/derivatives/data_preprocessed/sub-tokyoIngenia03/anat/sub-tokyoIngenia03_space-other_T1w.json +++ b/derivatives/data_preprocessed/sub-tokyoIngenia03/anat/sub-tokyoIngenia03_space-other_T1w.json @@ -1,51 +1,63 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 127.762, - "Manufacturer": "Philips", - "ManufacturersModelName": "Ingenia_CX", - "InstitutionName": "Tokyo_University_Hospital", - "InstitutionalDepartmentName": "Radiology", - "DeviceSerialNumber": "78091", - "StationName": "HOST-77RBK8NK2K", - "BodyPartExamined": "SPINE", - "PatientPosition": "HFS", - "SoftwareVersions": "5.3.1_5.3.1.1", - "MRAcquisitionType": "3D", - "SeriesDescription": "T1w", - "ProtocolName": "T1w", - "ScanningSequence": "GR", - "SequenceVariant": "MP", - "ScanOptions": "OTHER", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "FFE", "M", "FFE"], - "SeriesNumber": 401, - "AcquisitionTime": "18:52:9.560000", - "AcquisitionNumber": 4, - "PhilipsRescaleSlope": 2.83761, - "PhilipsRescaleIntercept": 0, - "PhilipsScaleSlope": 0.00423123, - "UsePhilipsFloatNotDisplayScaling": 1, - "SliceThickness": 1, - "SpacingBetweenSlices": 1, - "SAR": 0.0334169, - "EchoTime": 0.003554, - "RepetitionTime": 0.0076637, - "FlipAngle": 9, - "CoilString": "MULTI_COIL", - "PercentPhaseFOV": 81.25, - "EchoTrainLength": 246, - "PhaseEncodingSteps": 320, - "AcquisitionMatrixPE": 320, - "ReconMatrixPE": 320, - "PixelBandwidth": 191, - "ImageOrientationPatientDICOM": [ - -0.00316631, - 0.999995, - 2.9127e-05, - 0.00129789, - 3.32366e-05, - -0.999999 ], - "InPlanePhaseEncodingDirectionDICOM": "ROW", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 127.762, + "Manufacturer": "Philips", + "ManufacturersModelName": "Ingenia_CX", + "InstitutionName": "Tokyo_University_Hospital", + "InstitutionalDepartmentName": "Radiology", + "DeviceSerialNumber": "78091", + "StationName": "HOST-77RBK8NK2K", + "BodyPartExamined": "SPINE", + "PatientPosition": "HFS", + "SoftwareVersions": "5.3.1_5.3.1.1", + "MRAcquisitionType": "3D", + "SeriesDescription": "T1w", + "ProtocolName": "T1w", + "ScanningSequence": "GR", + "SequenceVariant": "MP", + "ScanOptions": "OTHER", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "FFE", + "M", + "FFE" + ], + "SeriesNumber": 401, + "AcquisitionTime": "18:52:9.560000", + "AcquisitionNumber": 4, + "PhilipsRescaleSlope": 2.83761, + "PhilipsRescaleIntercept": 0, + "PhilipsScaleSlope": 0.00423123, + "UsePhilipsFloatNotDisplayScaling": 1, + "SliceThickness": 1, + "SpacingBetweenSlices": 1, + "SAR": 0.0334169, + "EchoTime": 0.003554, + "RepetitionTime": 0.0076637, + "FlipAngle": 9, + "CoilString": "MULTI_COIL", + "PercentPhaseFOV": 81.25, + "EchoTrainLength": 246, + "PhaseEncodingSteps": 320, + "AcquisitionMatrixPE": 320, + "ReconMatrixPE": 320, + "PixelBandwidth": 191, + "ImageOrientationPatientDICOM": [ + -0.00316631, + 0.999995, + 2.9127e-05, + 0.00129789, + 3.32366e-05, + -0.999999 + ], + "InPlanePhaseEncodingDirectionDICOM": "ROW", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-tokyoIngenia03/anat/sub-tokyoIngenia03_space-other_T2star.json b/derivatives/data_preprocessed/sub-tokyoIngenia03/anat/sub-tokyoIngenia03_space-other_T2star.json index 0d3c2a25bb..f4d25843ae 100644 --- a/derivatives/data_preprocessed/sub-tokyoIngenia03/anat/sub-tokyoIngenia03_space-other_T2star.json +++ b/derivatives/data_preprocessed/sub-tokyoIngenia03/anat/sub-tokyoIngenia03_space-other_T2star.json @@ -58,5 +58,9 @@ "InPlanePhaseEncodingDirectionDICOM": "COL", "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0", - "AcquisitionDuration": 242.5 + "AcquisitionDuration": 242.5, + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-tokyoIngenia03/anat/sub-tokyoIngenia03_space-other_T2w.json b/derivatives/data_preprocessed/sub-tokyoIngenia03/anat/sub-tokyoIngenia03_space-other_T2w.json index 08bcd55746..07ed0c72b7 100644 --- a/derivatives/data_preprocessed/sub-tokyoIngenia03/anat/sub-tokyoIngenia03_space-other_T2w.json +++ b/derivatives/data_preprocessed/sub-tokyoIngenia03/anat/sub-tokyoIngenia03_space-other_T2w.json @@ -1,51 +1,63 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 127.762, - "Manufacturer": "Philips", - "ManufacturersModelName": "Ingenia_CX", - "InstitutionName": "Tokyo_University_Hospital", - "InstitutionalDepartmentName": "Radiology", - "DeviceSerialNumber": "78091", - "StationName": "HOST-77RBK8NK2K", - "BodyPartExamined": "SPINE", - "PatientPosition": "HFS", - "SoftwareVersions": "5.3.1_5.3.1.1", - "MRAcquisitionType": "3D", - "SeriesDescription": "T2w", - "ProtocolName": "T2w", - "ScanningSequence": "SE", - "SequenceVariant": "SK", - "ScanOptions": "PFP", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "SE", "M", "SE"], - "SeriesNumber": 501, - "AcquisitionTime": "18:57:8.160000", - "AcquisitionNumber": 5, - "PhilipsRescaleSlope": 1.36044, - "PhilipsRescaleIntercept": 0, - "PhilipsScaleSlope": 0.00120264, - "UsePhilipsFloatNotDisplayScaling": 1, - "SliceThickness": 0.8, - "SpacingBetweenSlices": 0.8, - "SAR": 1.29942, - "EchoTime": 0.12, - "RepetitionTime": 3.5, - "FlipAngle": 90, - "CoilString": "MULTI_COIL", - "PercentPhaseFOV": 92.5, - "EchoTrainLength": 92, - "PhaseEncodingSteps": 316, - "AcquisitionMatrixPE": 316, - "ReconMatrixPE": 320, - "PixelBandwidth": 367, - "ImageOrientationPatientDICOM": [ - -0.00236302, - 0.999997, - 1.6222e-05, - 0.00596568, - 3.03188e-05, - -0.999982 ], - "InPlanePhaseEncodingDirectionDICOM": "ROW", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 127.762, + "Manufacturer": "Philips", + "ManufacturersModelName": "Ingenia_CX", + "InstitutionName": "Tokyo_University_Hospital", + "InstitutionalDepartmentName": "Radiology", + "DeviceSerialNumber": "78091", + "StationName": "HOST-77RBK8NK2K", + "BodyPartExamined": "SPINE", + "PatientPosition": "HFS", + "SoftwareVersions": "5.3.1_5.3.1.1", + "MRAcquisitionType": "3D", + "SeriesDescription": "T2w", + "ProtocolName": "T2w", + "ScanningSequence": "SE", + "SequenceVariant": "SK", + "ScanOptions": "PFP", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "SE", + "M", + "SE" + ], + "SeriesNumber": 501, + "AcquisitionTime": "18:57:8.160000", + "AcquisitionNumber": 5, + "PhilipsRescaleSlope": 1.36044, + "PhilipsRescaleIntercept": 0, + "PhilipsScaleSlope": 0.00120264, + "UsePhilipsFloatNotDisplayScaling": 1, + "SliceThickness": 0.8, + "SpacingBetweenSlices": 0.8, + "SAR": 1.29942, + "EchoTime": 0.12, + "RepetitionTime": 3.5, + "FlipAngle": 90, + "CoilString": "MULTI_COIL", + "PercentPhaseFOV": 92.5, + "EchoTrainLength": 92, + "PhaseEncodingSteps": 316, + "AcquisitionMatrixPE": 316, + "ReconMatrixPE": 320, + "PixelBandwidth": 367, + "ImageOrientationPatientDICOM": [ + -0.00236302, + 0.999997, + 1.6222e-05, + 0.00596568, + 3.03188e-05, + -0.999982 + ], + "InPlanePhaseEncodingDirectionDICOM": "ROW", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-tokyoIngenia04/anat/sub-tokyoIngenia04_flip-1_mt-on_space-other_MTS.json b/derivatives/data_preprocessed/sub-tokyoIngenia04/anat/sub-tokyoIngenia04_flip-1_mt-on_space-other_MTS.json index 6b3d0d7181..497f14fa93 100644 --- a/derivatives/data_preprocessed/sub-tokyoIngenia04/anat/sub-tokyoIngenia04_flip-1_mt-on_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-tokyoIngenia04/anat/sub-tokyoIngenia04_flip-1_mt-on_space-other_MTS.json @@ -1,50 +1,61 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 127.763, - "Manufacturer": "Philips", - "ManufacturersModelName": "Ingenia_CX", - "InstitutionName": "Tokyo_University_Hospital", - "InstitutionalDepartmentName": "Radiology", - "DeviceSerialNumber": "78091", - "StationName": "HOST-77RBK8NK2K", - "BodyPartExamined": "SPINE", - "PatientPosition": "HFS", - "SoftwareVersions": "5.3.1_5.3.1.1", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-MT", - "ProtocolName": "GRE-MT", - "ScanningSequence": "GR", - "SequenceVariant": "SP", - "ScanOptions": "PFF", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "FFE", "M", "FFE"], - "SeriesNumber": 901, - "AcquisitionTime": "18:16:34.430000", - "AcquisitionNumber": 9, - "PhilipsRescaleSlope": 1.63736, - "PhilipsRescaleIntercept": 0, - "PhilipsScaleSlope": 0.000751061, - "UsePhilipsFloatNotDisplayScaling": 1, - "SliceThickness": 5, - "SpacingBetweenSlices": 5, - "SAR": 2.35918, - "EchoTime": 0.002001, - "RepetitionTime": 0.057, - "FlipAngle": 9, - "CoilString": "MULTI_COIL", - "PercentPhaseFOV": 100, - "PhaseEncodingSteps": 256, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 256, - "PixelBandwidth": 261, - "ImageOrientationPatientDICOM": [ - 0.998885, - -0.00222832, - 0.0471596, - -0.00571295, - 0.985841, - 0.167587 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 127.763, + "Manufacturer": "Philips", + "ManufacturersModelName": "Ingenia_CX", + "InstitutionName": "Tokyo_University_Hospital", + "InstitutionalDepartmentName": "Radiology", + "DeviceSerialNumber": "78091", + "StationName": "HOST-77RBK8NK2K", + "BodyPartExamined": "SPINE", + "PatientPosition": "HFS", + "SoftwareVersions": "5.3.1_5.3.1.1", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-MT", + "ProtocolName": "GRE-MT", + "ScanningSequence": "GR", + "SequenceVariant": "SP", + "ScanOptions": "PFF", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "FFE", + "M", + "FFE" + ], + "SeriesNumber": 901, + "AcquisitionTime": "18:16:34.430000", + "AcquisitionNumber": 9, + "PhilipsRescaleSlope": 1.63736, + "PhilipsRescaleIntercept": 0, + "PhilipsScaleSlope": 0.000751061, + "UsePhilipsFloatNotDisplayScaling": 1, + "SliceThickness": 5, + "SpacingBetweenSlices": 5, + "SAR": 2.35918, + "EchoTime": 0.002001, + "RepetitionTime": 0.057, + "FlipAngle": 9, + "CoilString": "MULTI_COIL", + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 256, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "PixelBandwidth": 261, + "ImageOrientationPatientDICOM": [ + 0.998885, + -0.00222832, + 0.0471596, + -0.00571295, + 0.985841, + 0.167587 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-tokyoIngenia04/anat/sub-tokyoIngenia04_flip-2_mt-off_space-other_MTS.json b/derivatives/data_preprocessed/sub-tokyoIngenia04/anat/sub-tokyoIngenia04_flip-2_mt-off_space-other_MTS.json index d4dd410e2a..fbcd392355 100644 --- a/derivatives/data_preprocessed/sub-tokyoIngenia04/anat/sub-tokyoIngenia04_flip-2_mt-off_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-tokyoIngenia04/anat/sub-tokyoIngenia04_flip-2_mt-off_space-other_MTS.json @@ -1,50 +1,61 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 127.763, - "Manufacturer": "Philips", - "ManufacturersModelName": "Ingenia_CX", - "InstitutionName": "Tokyo_University_Hospital", - "InstitutionalDepartmentName": "Radiology", - "DeviceSerialNumber": "78091", - "StationName": "HOST-77RBK8NK2K", - "BodyPartExamined": "SPINE", - "PatientPosition": "HFS", - "SoftwareVersions": "5.3.1_5.3.1.1", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-T1", - "ProtocolName": "GRE-T1", - "ScanningSequence": "GR", - "SequenceVariant": "SP", - "ScanOptions": "PFF", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "FFE", "M", "FFE"], - "SeriesNumber": 1001, - "AcquisitionTime": "18:20:59.620000", - "AcquisitionNumber": 10, - "PhilipsRescaleSlope": 1.8127, - "PhilipsRescaleIntercept": 0, - "PhilipsScaleSlope": 0.000738749, - "UsePhilipsFloatNotDisplayScaling": 1, - "SliceThickness": 5, - "SpacingBetweenSlices": 5, - "SAR": 0.284064, - "EchoTime": 0.002001, - "RepetitionTime": 0.015, - "FlipAngle": 15, - "CoilString": "MULTI_COIL", - "PercentPhaseFOV": 100, - "PhaseEncodingSteps": 256, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 256, - "PixelBandwidth": 261, - "ImageOrientationPatientDICOM": [ - 0.998885, - -0.00222832, - 0.0471596, - -0.00571295, - 0.985841, - 0.167587 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 127.763, + "Manufacturer": "Philips", + "ManufacturersModelName": "Ingenia_CX", + "InstitutionName": "Tokyo_University_Hospital", + "InstitutionalDepartmentName": "Radiology", + "DeviceSerialNumber": "78091", + "StationName": "HOST-77RBK8NK2K", + "BodyPartExamined": "SPINE", + "PatientPosition": "HFS", + "SoftwareVersions": "5.3.1_5.3.1.1", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-T1", + "ProtocolName": "GRE-T1", + "ScanningSequence": "GR", + "SequenceVariant": "SP", + "ScanOptions": "PFF", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "FFE", + "M", + "FFE" + ], + "SeriesNumber": 1001, + "AcquisitionTime": "18:20:59.620000", + "AcquisitionNumber": 10, + "PhilipsRescaleSlope": 1.8127, + "PhilipsRescaleIntercept": 0, + "PhilipsScaleSlope": 0.000738749, + "UsePhilipsFloatNotDisplayScaling": 1, + "SliceThickness": 5, + "SpacingBetweenSlices": 5, + "SAR": 0.284064, + "EchoTime": 0.002001, + "RepetitionTime": 0.015, + "FlipAngle": 15, + "CoilString": "MULTI_COIL", + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 256, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "PixelBandwidth": 261, + "ImageOrientationPatientDICOM": [ + 0.998885, + -0.00222832, + 0.0471596, + -0.00571295, + 0.985841, + 0.167587 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-tokyoIngenia04/anat/sub-tokyoIngenia04_space-other_T1w.json b/derivatives/data_preprocessed/sub-tokyoIngenia04/anat/sub-tokyoIngenia04_space-other_T1w.json index 1cd9b4cddc..d5eb0fdce2 100644 --- a/derivatives/data_preprocessed/sub-tokyoIngenia04/anat/sub-tokyoIngenia04_space-other_T1w.json +++ b/derivatives/data_preprocessed/sub-tokyoIngenia04/anat/sub-tokyoIngenia04_space-other_T1w.json @@ -1,51 +1,63 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 127.762, - "Manufacturer": "Philips", - "ManufacturersModelName": "Ingenia_CX", - "InstitutionName": "Tokyo_University_Hospital", - "InstitutionalDepartmentName": "Radiology", - "DeviceSerialNumber": "78091", - "StationName": "HOST-77RBK8NK2K", - "BodyPartExamined": "SPINE", - "PatientPosition": "HFS", - "SoftwareVersions": "5.3.1_5.3.1.1", - "MRAcquisitionType": "3D", - "SeriesDescription": "T1w", - "ProtocolName": "T1w", - "ScanningSequence": "GR", - "SequenceVariant": "MP", - "ScanOptions": "OTHER", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "FFE", "M", "FFE"], - "SeriesNumber": 301, - "AcquisitionTime": "17:45:5.520000", - "AcquisitionNumber": 3, - "PhilipsRescaleSlope": 3.35165, - "PhilipsRescaleIntercept": 0, - "PhilipsScaleSlope": 0.00404677, - "UsePhilipsFloatNotDisplayScaling": 1, - "SliceThickness": 1, - "SpacingBetweenSlices": 1, - "SAR": 0.0334169, - "EchoTime": 0.003553, - "RepetitionTime": 0.0076312, - "FlipAngle": 9, - "CoilString": "MULTI_COIL", - "PercentPhaseFOV": 81.25, - "EchoTrainLength": 246, - "PhaseEncodingSteps": 320, - "AcquisitionMatrixPE": 320, - "ReconMatrixPE": 320, - "PixelBandwidth": 191, - "ImageOrientationPatientDICOM": [ - -0.000148858, - 1, - 2.80061e-07, - 0.0359061, - 5.6248e-06, - -0.999355 ], - "InPlanePhaseEncodingDirectionDICOM": "ROW", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 127.762, + "Manufacturer": "Philips", + "ManufacturersModelName": "Ingenia_CX", + "InstitutionName": "Tokyo_University_Hospital", + "InstitutionalDepartmentName": "Radiology", + "DeviceSerialNumber": "78091", + "StationName": "HOST-77RBK8NK2K", + "BodyPartExamined": "SPINE", + "PatientPosition": "HFS", + "SoftwareVersions": "5.3.1_5.3.1.1", + "MRAcquisitionType": "3D", + "SeriesDescription": "T1w", + "ProtocolName": "T1w", + "ScanningSequence": "GR", + "SequenceVariant": "MP", + "ScanOptions": "OTHER", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "FFE", + "M", + "FFE" + ], + "SeriesNumber": 301, + "AcquisitionTime": "17:45:5.520000", + "AcquisitionNumber": 3, + "PhilipsRescaleSlope": 3.35165, + "PhilipsRescaleIntercept": 0, + "PhilipsScaleSlope": 0.00404677, + "UsePhilipsFloatNotDisplayScaling": 1, + "SliceThickness": 1, + "SpacingBetweenSlices": 1, + "SAR": 0.0334169, + "EchoTime": 0.003553, + "RepetitionTime": 0.0076312, + "FlipAngle": 9, + "CoilString": "MULTI_COIL", + "PercentPhaseFOV": 81.25, + "EchoTrainLength": 246, + "PhaseEncodingSteps": 320, + "AcquisitionMatrixPE": 320, + "ReconMatrixPE": 320, + "PixelBandwidth": 191, + "ImageOrientationPatientDICOM": [ + -0.000148858, + 1, + 2.80061e-07, + 0.0359061, + 5.6248e-06, + -0.999355 + ], + "InPlanePhaseEncodingDirectionDICOM": "ROW", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-tokyoIngenia04/anat/sub-tokyoIngenia04_space-other_T2star.json b/derivatives/data_preprocessed/sub-tokyoIngenia04/anat/sub-tokyoIngenia04_space-other_T2star.json index 462ad525ec..6ea709c73a 100644 --- a/derivatives/data_preprocessed/sub-tokyoIngenia04/anat/sub-tokyoIngenia04_space-other_T2star.json +++ b/derivatives/data_preprocessed/sub-tokyoIngenia04/anat/sub-tokyoIngenia04_space-other_T2star.json @@ -58,5 +58,9 @@ "InPlanePhaseEncodingDirectionDICOM": "COL", "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0", - "AcquisitionDuration": 242.5 + "AcquisitionDuration": 242.5, + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-tokyoIngenia04/anat/sub-tokyoIngenia04_space-other_T2w.json b/derivatives/data_preprocessed/sub-tokyoIngenia04/anat/sub-tokyoIngenia04_space-other_T2w.json index 96dbc87485..b5cab21f82 100644 --- a/derivatives/data_preprocessed/sub-tokyoIngenia04/anat/sub-tokyoIngenia04_space-other_T2w.json +++ b/derivatives/data_preprocessed/sub-tokyoIngenia04/anat/sub-tokyoIngenia04_space-other_T2w.json @@ -1,51 +1,63 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 127.762, - "Manufacturer": "Philips", - "ManufacturersModelName": "Ingenia_CX", - "InstitutionName": "Tokyo_University_Hospital", - "InstitutionalDepartmentName": "Radiology", - "DeviceSerialNumber": "78091", - "StationName": "HOST-77RBK8NK2K", - "BodyPartExamined": "SPINE", - "PatientPosition": "HFS", - "SoftwareVersions": "5.3.1_5.3.1.1", - "MRAcquisitionType": "3D", - "SeriesDescription": "T2w", - "ProtocolName": "T2w", - "ScanningSequence": "SE", - "SequenceVariant": "SK", - "ScanOptions": "PFP", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "SE", "M", "SE"], - "SeriesNumber": 401, - "AcquisitionTime": "17:50:55.800000", - "AcquisitionNumber": 4, - "PhilipsRescaleSlope": 1.35458, - "PhilipsRescaleIntercept": 0, - "PhilipsScaleSlope": 0.00116226, - "UsePhilipsFloatNotDisplayScaling": 1, - "SliceThickness": 0.8, - "SpacingBetweenSlices": 0.8, - "SAR": 1.29942, - "EchoTime": 0.12, - "RepetitionTime": 3.5, - "FlipAngle": 90, - "CoilString": "MULTI_COIL", - "PercentPhaseFOV": 92.5, - "EchoTrainLength": 92, - "PhaseEncodingSteps": 316, - "AcquisitionMatrixPE": 316, - "ReconMatrixPE": 320, - "PixelBandwidth": 367, - "ImageOrientationPatientDICOM": [ - 0.000306185, - 1, - 1.1849e-06, - 0.0473986, - -1.33292e-05, - -0.998876 ], - "InPlanePhaseEncodingDirectionDICOM": "ROW", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 127.762, + "Manufacturer": "Philips", + "ManufacturersModelName": "Ingenia_CX", + "InstitutionName": "Tokyo_University_Hospital", + "InstitutionalDepartmentName": "Radiology", + "DeviceSerialNumber": "78091", + "StationName": "HOST-77RBK8NK2K", + "BodyPartExamined": "SPINE", + "PatientPosition": "HFS", + "SoftwareVersions": "5.3.1_5.3.1.1", + "MRAcquisitionType": "3D", + "SeriesDescription": "T2w", + "ProtocolName": "T2w", + "ScanningSequence": "SE", + "SequenceVariant": "SK", + "ScanOptions": "PFP", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "SE", + "M", + "SE" + ], + "SeriesNumber": 401, + "AcquisitionTime": "17:50:55.800000", + "AcquisitionNumber": 4, + "PhilipsRescaleSlope": 1.35458, + "PhilipsRescaleIntercept": 0, + "PhilipsScaleSlope": 0.00116226, + "UsePhilipsFloatNotDisplayScaling": 1, + "SliceThickness": 0.8, + "SpacingBetweenSlices": 0.8, + "SAR": 1.29942, + "EchoTime": 0.12, + "RepetitionTime": 3.5, + "FlipAngle": 90, + "CoilString": "MULTI_COIL", + "PercentPhaseFOV": 92.5, + "EchoTrainLength": 92, + "PhaseEncodingSteps": 316, + "AcquisitionMatrixPE": 316, + "ReconMatrixPE": 320, + "PixelBandwidth": 367, + "ImageOrientationPatientDICOM": [ + 0.000306185, + 1, + 1.1849e-06, + 0.0473986, + -1.33292e-05, + -0.998876 + ], + "InPlanePhaseEncodingDirectionDICOM": "ROW", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-tokyoIngenia05/anat/sub-tokyoIngenia05_flip-1_mt-on_space-other_MTS.json b/derivatives/data_preprocessed/sub-tokyoIngenia05/anat/sub-tokyoIngenia05_flip-1_mt-on_space-other_MTS.json index 7bd357acf3..63857dc8d1 100644 --- a/derivatives/data_preprocessed/sub-tokyoIngenia05/anat/sub-tokyoIngenia05_flip-1_mt-on_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-tokyoIngenia05/anat/sub-tokyoIngenia05_flip-1_mt-on_space-other_MTS.json @@ -1,50 +1,61 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 127.762, - "Manufacturer": "Philips", - "ManufacturersModelName": "Ingenia_CX", - "InstitutionName": "Tokyo_University_Hospital", - "InstitutionalDepartmentName": "Radiology", - "DeviceSerialNumber": "78091", - "StationName": "HOST-77RBK8NK2K", - "BodyPartExamined": "SPINE", - "PatientPosition": "HFS", - "SoftwareVersions": "5.3.1_5.3.1.1", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-MT", - "ProtocolName": "GRE-MT", - "ScanningSequence": "GR", - "SequenceVariant": "SP", - "ScanOptions": "PFF", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "FFE", "M", "FFE"], - "SeriesNumber": 601, - "AcquisitionTime": "14:41:19.830000", - "AcquisitionNumber": 6, - "PhilipsRescaleSlope": 1.61392, - "PhilipsRescaleIntercept": 0, - "PhilipsScaleSlope": 0.000830972, - "UsePhilipsFloatNotDisplayScaling": 1, - "SliceThickness": 5, - "SpacingBetweenSlices": 5, - "SAR": 2.35918, - "EchoTime": 0.002001, - "RepetitionTime": 0.057, - "FlipAngle": 9, - "CoilString": "MULTI_COIL", - "PercentPhaseFOV": 100, - "PhaseEncodingSteps": 256, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 256, - "PixelBandwidth": 261, - "ImageOrientationPatientDICOM": [ - 0.999641, - 0.0144302, - 0.0225804, - -0.0195166, - 0.969462, - 0.244465 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 127.762, + "Manufacturer": "Philips", + "ManufacturersModelName": "Ingenia_CX", + "InstitutionName": "Tokyo_University_Hospital", + "InstitutionalDepartmentName": "Radiology", + "DeviceSerialNumber": "78091", + "StationName": "HOST-77RBK8NK2K", + "BodyPartExamined": "SPINE", + "PatientPosition": "HFS", + "SoftwareVersions": "5.3.1_5.3.1.1", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-MT", + "ProtocolName": "GRE-MT", + "ScanningSequence": "GR", + "SequenceVariant": "SP", + "ScanOptions": "PFF", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "FFE", + "M", + "FFE" + ], + "SeriesNumber": 601, + "AcquisitionTime": "14:41:19.830000", + "AcquisitionNumber": 6, + "PhilipsRescaleSlope": 1.61392, + "PhilipsRescaleIntercept": 0, + "PhilipsScaleSlope": 0.000830972, + "UsePhilipsFloatNotDisplayScaling": 1, + "SliceThickness": 5, + "SpacingBetweenSlices": 5, + "SAR": 2.35918, + "EchoTime": 0.002001, + "RepetitionTime": 0.057, + "FlipAngle": 9, + "CoilString": "MULTI_COIL", + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 256, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "PixelBandwidth": 261, + "ImageOrientationPatientDICOM": [ + 0.999641, + 0.0144302, + 0.0225804, + -0.0195166, + 0.969462, + 0.244465 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-tokyoIngenia05/anat/sub-tokyoIngenia05_flip-2_mt-off_space-other_MTS.json b/derivatives/data_preprocessed/sub-tokyoIngenia05/anat/sub-tokyoIngenia05_flip-2_mt-off_space-other_MTS.json index 2c42f7196c..459ffa1ef8 100644 --- a/derivatives/data_preprocessed/sub-tokyoIngenia05/anat/sub-tokyoIngenia05_flip-2_mt-off_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-tokyoIngenia05/anat/sub-tokyoIngenia05_flip-2_mt-off_space-other_MTS.json @@ -1,50 +1,61 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 127.762, - "Manufacturer": "Philips", - "ManufacturersModelName": "Ingenia_CX", - "InstitutionName": "Tokyo_University_Hospital", - "InstitutionalDepartmentName": "Radiology", - "DeviceSerialNumber": "78091", - "StationName": "HOST-77RBK8NK2K", - "BodyPartExamined": "SPINE", - "PatientPosition": "HFS", - "SoftwareVersions": "5.3.1_5.3.1.1", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-T1", - "ProtocolName": "GRE-T1", - "ScanningSequence": "GR", - "SequenceVariant": "SP", - "ScanOptions": "PFF", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "FFE", "M", "FFE"], - "SeriesNumber": 701, - "AcquisitionTime": "14:45:45.670000", - "AcquisitionNumber": 7, - "PhilipsRescaleSlope": 1.78388, - "PhilipsRescaleIntercept": 0, - "PhilipsScaleSlope": 0.000830972, - "UsePhilipsFloatNotDisplayScaling": 1, - "SliceThickness": 5, - "SpacingBetweenSlices": 5, - "SAR": 0.284064, - "EchoTime": 0.002001, - "RepetitionTime": 0.015, - "FlipAngle": 15, - "CoilString": "MULTI_COIL", - "PercentPhaseFOV": 100, - "PhaseEncodingSteps": 256, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 256, - "PixelBandwidth": 261, - "ImageOrientationPatientDICOM": [ - 0.999641, - 0.0144302, - 0.0225804, - -0.0195166, - 0.969462, - 0.244465 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 127.762, + "Manufacturer": "Philips", + "ManufacturersModelName": "Ingenia_CX", + "InstitutionName": "Tokyo_University_Hospital", + "InstitutionalDepartmentName": "Radiology", + "DeviceSerialNumber": "78091", + "StationName": "HOST-77RBK8NK2K", + "BodyPartExamined": "SPINE", + "PatientPosition": "HFS", + "SoftwareVersions": "5.3.1_5.3.1.1", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-T1", + "ProtocolName": "GRE-T1", + "ScanningSequence": "GR", + "SequenceVariant": "SP", + "ScanOptions": "PFF", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "FFE", + "M", + "FFE" + ], + "SeriesNumber": 701, + "AcquisitionTime": "14:45:45.670000", + "AcquisitionNumber": 7, + "PhilipsRescaleSlope": 1.78388, + "PhilipsRescaleIntercept": 0, + "PhilipsScaleSlope": 0.000830972, + "UsePhilipsFloatNotDisplayScaling": 1, + "SliceThickness": 5, + "SpacingBetweenSlices": 5, + "SAR": 0.284064, + "EchoTime": 0.002001, + "RepetitionTime": 0.015, + "FlipAngle": 15, + "CoilString": "MULTI_COIL", + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 256, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "PixelBandwidth": 261, + "ImageOrientationPatientDICOM": [ + 0.999641, + 0.0144302, + 0.0225804, + -0.0195166, + 0.969462, + 0.244465 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-tokyoIngenia05/anat/sub-tokyoIngenia05_space-other_T1w.json b/derivatives/data_preprocessed/sub-tokyoIngenia05/anat/sub-tokyoIngenia05_space-other_T1w.json index 36e347e288..53f49683a8 100644 --- a/derivatives/data_preprocessed/sub-tokyoIngenia05/anat/sub-tokyoIngenia05_space-other_T1w.json +++ b/derivatives/data_preprocessed/sub-tokyoIngenia05/anat/sub-tokyoIngenia05_space-other_T1w.json @@ -1,51 +1,63 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 127.761, - "Manufacturer": "Philips", - "ManufacturersModelName": "Ingenia_CX", - "InstitutionName": "Tokyo_University_Hospital", - "InstitutionalDepartmentName": "Radiology", - "DeviceSerialNumber": "78091", - "StationName": "HOST-77RBK8NK2K", - "BodyPartExamined": "SPINE", - "PatientPosition": "HFS", - "SoftwareVersions": "5.3.1_5.3.1.1", - "MRAcquisitionType": "3D", - "SeriesDescription": "T1w", - "ProtocolName": "T1w", - "ScanningSequence": "GR", - "SequenceVariant": "MP", - "ScanOptions": "OTHER", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "FFE", "M", "FFE"], - "SeriesNumber": 301, - "AcquisitionTime": "14:21:12.980000", - "AcquisitionNumber": 3, - "PhilipsRescaleSlope": 2.76923, - "PhilipsRescaleIntercept": 0, - "PhilipsScaleSlope": 0.00448399, - "UsePhilipsFloatNotDisplayScaling": 1, - "SliceThickness": 1, - "SpacingBetweenSlices": 1, - "SAR": 0.0334169, - "EchoTime": 0.003551, - "RepetitionTime": 0.0076375, - "FlipAngle": 9, - "CoilString": "MULTI_COIL", - "PercentPhaseFOV": 81.25, - "EchoTrainLength": 246, - "PhaseEncodingSteps": 320, - "AcquisitionMatrixPE": 320, - "ReconMatrixPE": 320, - "PixelBandwidth": 191, - "ImageOrientationPatientDICOM": [ - -0.0215079, - 0.999769, - -4.70989e-11, - 0.0307637, - 0.000661817, - -0.999526 ], - "InPlanePhaseEncodingDirectionDICOM": "ROW", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 127.761, + "Manufacturer": "Philips", + "ManufacturersModelName": "Ingenia_CX", + "InstitutionName": "Tokyo_University_Hospital", + "InstitutionalDepartmentName": "Radiology", + "DeviceSerialNumber": "78091", + "StationName": "HOST-77RBK8NK2K", + "BodyPartExamined": "SPINE", + "PatientPosition": "HFS", + "SoftwareVersions": "5.3.1_5.3.1.1", + "MRAcquisitionType": "3D", + "SeriesDescription": "T1w", + "ProtocolName": "T1w", + "ScanningSequence": "GR", + "SequenceVariant": "MP", + "ScanOptions": "OTHER", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "FFE", + "M", + "FFE" + ], + "SeriesNumber": 301, + "AcquisitionTime": "14:21:12.980000", + "AcquisitionNumber": 3, + "PhilipsRescaleSlope": 2.76923, + "PhilipsRescaleIntercept": 0, + "PhilipsScaleSlope": 0.00448399, + "UsePhilipsFloatNotDisplayScaling": 1, + "SliceThickness": 1, + "SpacingBetweenSlices": 1, + "SAR": 0.0334169, + "EchoTime": 0.003551, + "RepetitionTime": 0.0076375, + "FlipAngle": 9, + "CoilString": "MULTI_COIL", + "PercentPhaseFOV": 81.25, + "EchoTrainLength": 246, + "PhaseEncodingSteps": 320, + "AcquisitionMatrixPE": 320, + "ReconMatrixPE": 320, + "PixelBandwidth": 191, + "ImageOrientationPatientDICOM": [ + -0.0215079, + 0.999769, + -4.70989e-11, + 0.0307637, + 0.000661817, + -0.999526 + ], + "InPlanePhaseEncodingDirectionDICOM": "ROW", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-tokyoIngenia05/anat/sub-tokyoIngenia05_space-other_T2star.json b/derivatives/data_preprocessed/sub-tokyoIngenia05/anat/sub-tokyoIngenia05_space-other_T2star.json index dc9606cfb7..1d583a44c5 100644 --- a/derivatives/data_preprocessed/sub-tokyoIngenia05/anat/sub-tokyoIngenia05_space-other_T2star.json +++ b/derivatives/data_preprocessed/sub-tokyoIngenia05/anat/sub-tokyoIngenia05_space-other_T2star.json @@ -58,5 +58,9 @@ "InPlanePhaseEncodingDirectionDICOM": "COL", "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0", - "AcquisitionDuration": 242.5 + "AcquisitionDuration": 242.5, + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-tokyoIngenia05/anat/sub-tokyoIngenia05_space-other_T2w.json b/derivatives/data_preprocessed/sub-tokyoIngenia05/anat/sub-tokyoIngenia05_space-other_T2w.json index f9c2a14354..4bf1e41495 100644 --- a/derivatives/data_preprocessed/sub-tokyoIngenia05/anat/sub-tokyoIngenia05_space-other_T2w.json +++ b/derivatives/data_preprocessed/sub-tokyoIngenia05/anat/sub-tokyoIngenia05_space-other_T2w.json @@ -1,51 +1,63 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 127.761, - "Manufacturer": "Philips", - "ManufacturersModelName": "Ingenia_CX", - "InstitutionName": "Tokyo_University_Hospital", - "InstitutionalDepartmentName": "Radiology", - "DeviceSerialNumber": "78091", - "StationName": "HOST-77RBK8NK2K", - "BodyPartExamined": "SPINE", - "PatientPosition": "HFS", - "SoftwareVersions": "5.3.1_5.3.1.1", - "MRAcquisitionType": "3D", - "SeriesDescription": "T2w", - "ProtocolName": "T2w", - "ScanningSequence": "SE", - "SequenceVariant": "SK", - "ScanOptions": "PFP", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "SE", "M", "SE"], - "SeriesNumber": 401, - "AcquisitionTime": "14:27:7.740000", - "AcquisitionNumber": 4, - "PhilipsRescaleSlope": 1.49035, - "PhilipsRescaleIntercept": 0, - "PhilipsScaleSlope": 0.00118795, - "UsePhilipsFloatNotDisplayScaling": 1, - "SliceThickness": 0.8, - "SpacingBetweenSlices": 0.8, - "SAR": 1.29942, - "EchoTime": 0.12, - "RepetitionTime": 3.5, - "FlipAngle": 90, - "CoilString": "MULTI_COIL", - "PercentPhaseFOV": 92.5, - "EchoTrainLength": 92, - "PhaseEncodingSteps": 316, - "AcquisitionMatrixPE": 316, - "ReconMatrixPE": 320, - "PixelBandwidth": 367, - "ImageOrientationPatientDICOM": [ - -0.0126456, - 0.99992, - 4.64645e-05, - 0.0245553, - 0.000356996, - -0.999698 ], - "InPlanePhaseEncodingDirectionDICOM": "ROW", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 127.761, + "Manufacturer": "Philips", + "ManufacturersModelName": "Ingenia_CX", + "InstitutionName": "Tokyo_University_Hospital", + "InstitutionalDepartmentName": "Radiology", + "DeviceSerialNumber": "78091", + "StationName": "HOST-77RBK8NK2K", + "BodyPartExamined": "SPINE", + "PatientPosition": "HFS", + "SoftwareVersions": "5.3.1_5.3.1.1", + "MRAcquisitionType": "3D", + "SeriesDescription": "T2w", + "ProtocolName": "T2w", + "ScanningSequence": "SE", + "SequenceVariant": "SK", + "ScanOptions": "PFP", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "SE", + "M", + "SE" + ], + "SeriesNumber": 401, + "AcquisitionTime": "14:27:7.740000", + "AcquisitionNumber": 4, + "PhilipsRescaleSlope": 1.49035, + "PhilipsRescaleIntercept": 0, + "PhilipsScaleSlope": 0.00118795, + "UsePhilipsFloatNotDisplayScaling": 1, + "SliceThickness": 0.8, + "SpacingBetweenSlices": 0.8, + "SAR": 1.29942, + "EchoTime": 0.12, + "RepetitionTime": 3.5, + "FlipAngle": 90, + "CoilString": "MULTI_COIL", + "PercentPhaseFOV": 92.5, + "EchoTrainLength": 92, + "PhaseEncodingSteps": 316, + "AcquisitionMatrixPE": 316, + "ReconMatrixPE": 320, + "PixelBandwidth": 367, + "ImageOrientationPatientDICOM": [ + -0.0126456, + 0.99992, + 4.64645e-05, + 0.0245553, + 0.000356996, + -0.999698 + ], + "InPlanePhaseEncodingDirectionDICOM": "ROW", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-tokyoIngenia06/anat/sub-tokyoIngenia06_flip-1_mt-on_space-other_MTS.json b/derivatives/data_preprocessed/sub-tokyoIngenia06/anat/sub-tokyoIngenia06_flip-1_mt-on_space-other_MTS.json index a5d5432407..1bd76ba52b 100644 --- a/derivatives/data_preprocessed/sub-tokyoIngenia06/anat/sub-tokyoIngenia06_flip-1_mt-on_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-tokyoIngenia06/anat/sub-tokyoIngenia06_flip-1_mt-on_space-other_MTS.json @@ -1,50 +1,61 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 127.763, - "Manufacturer": "Philips", - "ManufacturersModelName": "Ingenia_CX", - "InstitutionName": "Tokyo_University_Hospital", - "InstitutionalDepartmentName": "Radiology", - "DeviceSerialNumber": "78091", - "StationName": "HOST-77RBK8NK2K", - "BodyPartExamined": "SPINE", - "PatientPosition": "HFS", - "SoftwareVersions": "5.3.1_5.3.1.1", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-MT", - "ProtocolName": "GRE-MT", - "ScanningSequence": "GR", - "SequenceVariant": "SP", - "ScanOptions": "PFF", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "FFE", "M", "FFE"], - "SeriesNumber": 601, - "AcquisitionTime": "18:29:16.130000", - "AcquisitionNumber": 6, - "PhilipsRescaleSlope": 1.716, - "PhilipsRescaleIntercept": 0, - "PhilipsScaleSlope": 0.000770402, - "UsePhilipsFloatNotDisplayScaling": 1, - "SliceThickness": 5, - "SpacingBetweenSlices": 5, - "SAR": 2.35918, - "EchoTime": 0.002001, - "RepetitionTime": 0.057, - "FlipAngle": 9, - "CoilString": "MULTI_COIL", - "PercentPhaseFOV": 100, - "PhaseEncodingSteps": 256, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 256, - "PixelBandwidth": 261, - "ImageOrientationPatientDICOM": [ - 0.997952, - 0.0535571, - -0.0349825, - -0.0500689, - 0.994317, - 0.0939468 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 127.763, + "Manufacturer": "Philips", + "ManufacturersModelName": "Ingenia_CX", + "InstitutionName": "Tokyo_University_Hospital", + "InstitutionalDepartmentName": "Radiology", + "DeviceSerialNumber": "78091", + "StationName": "HOST-77RBK8NK2K", + "BodyPartExamined": "SPINE", + "PatientPosition": "HFS", + "SoftwareVersions": "5.3.1_5.3.1.1", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-MT", + "ProtocolName": "GRE-MT", + "ScanningSequence": "GR", + "SequenceVariant": "SP", + "ScanOptions": "PFF", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "FFE", + "M", + "FFE" + ], + "SeriesNumber": 601, + "AcquisitionTime": "18:29:16.130000", + "AcquisitionNumber": 6, + "PhilipsRescaleSlope": 1.716, + "PhilipsRescaleIntercept": 0, + "PhilipsScaleSlope": 0.000770402, + "UsePhilipsFloatNotDisplayScaling": 1, + "SliceThickness": 5, + "SpacingBetweenSlices": 5, + "SAR": 2.35918, + "EchoTime": 0.002001, + "RepetitionTime": 0.057, + "FlipAngle": 9, + "CoilString": "MULTI_COIL", + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 256, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "PixelBandwidth": 261, + "ImageOrientationPatientDICOM": [ + 0.997952, + 0.0535571, + -0.0349825, + -0.0500689, + 0.994317, + 0.0939468 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-tokyoIngenia06/anat/sub-tokyoIngenia06_flip-2_mt-off_space-other_MTS.json b/derivatives/data_preprocessed/sub-tokyoIngenia06/anat/sub-tokyoIngenia06_flip-2_mt-off_space-other_MTS.json index 7ac36b658a..86536d8977 100644 --- a/derivatives/data_preprocessed/sub-tokyoIngenia06/anat/sub-tokyoIngenia06_flip-2_mt-off_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-tokyoIngenia06/anat/sub-tokyoIngenia06_flip-2_mt-off_space-other_MTS.json @@ -1,50 +1,61 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 127.763, - "Manufacturer": "Philips", - "ManufacturersModelName": "Ingenia_CX", - "InstitutionName": "Tokyo_University_Hospital", - "InstitutionalDepartmentName": "Radiology", - "DeviceSerialNumber": "78091", - "StationName": "HOST-77RBK8NK2K", - "BodyPartExamined": "SPINE", - "PatientPosition": "HFS", - "SoftwareVersions": "5.3.1_5.3.1.1", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-T1", - "ProtocolName": "GRE-T1", - "ScanningSequence": "GR", - "SequenceVariant": "SP", - "ScanOptions": "PFF", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "FFE", "M", "FFE"], - "SeriesNumber": 701, - "AcquisitionTime": "18:33:41.600000", - "AcquisitionNumber": 7, - "PhilipsRescaleSlope": 1.77167, - "PhilipsRescaleIntercept": 0, - "PhilipsScaleSlope": 0.000770402, - "UsePhilipsFloatNotDisplayScaling": 1, - "SliceThickness": 5, - "SpacingBetweenSlices": 5, - "SAR": 0.284064, - "EchoTime": 0.002001, - "RepetitionTime": 0.015, - "FlipAngle": 15, - "CoilString": "MULTI_COIL", - "PercentPhaseFOV": 100, - "PhaseEncodingSteps": 256, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 256, - "PixelBandwidth": 261, - "ImageOrientationPatientDICOM": [ - 0.997952, - 0.0535571, - -0.0349825, - -0.0500689, - 0.994317, - 0.0939468 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 127.763, + "Manufacturer": "Philips", + "ManufacturersModelName": "Ingenia_CX", + "InstitutionName": "Tokyo_University_Hospital", + "InstitutionalDepartmentName": "Radiology", + "DeviceSerialNumber": "78091", + "StationName": "HOST-77RBK8NK2K", + "BodyPartExamined": "SPINE", + "PatientPosition": "HFS", + "SoftwareVersions": "5.3.1_5.3.1.1", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-T1", + "ProtocolName": "GRE-T1", + "ScanningSequence": "GR", + "SequenceVariant": "SP", + "ScanOptions": "PFF", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "FFE", + "M", + "FFE" + ], + "SeriesNumber": 701, + "AcquisitionTime": "18:33:41.600000", + "AcquisitionNumber": 7, + "PhilipsRescaleSlope": 1.77167, + "PhilipsRescaleIntercept": 0, + "PhilipsScaleSlope": 0.000770402, + "UsePhilipsFloatNotDisplayScaling": 1, + "SliceThickness": 5, + "SpacingBetweenSlices": 5, + "SAR": 0.284064, + "EchoTime": 0.002001, + "RepetitionTime": 0.015, + "FlipAngle": 15, + "CoilString": "MULTI_COIL", + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 256, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "PixelBandwidth": 261, + "ImageOrientationPatientDICOM": [ + 0.997952, + 0.0535571, + -0.0349825, + -0.0500689, + 0.994317, + 0.0939468 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-tokyoIngenia06/anat/sub-tokyoIngenia06_space-other_T1w.json b/derivatives/data_preprocessed/sub-tokyoIngenia06/anat/sub-tokyoIngenia06_space-other_T1w.json index 1700fc7813..274f71563d 100644 --- a/derivatives/data_preprocessed/sub-tokyoIngenia06/anat/sub-tokyoIngenia06_space-other_T1w.json +++ b/derivatives/data_preprocessed/sub-tokyoIngenia06/anat/sub-tokyoIngenia06_space-other_T1w.json @@ -1,51 +1,63 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 127.762, - "Manufacturer": "Philips", - "ManufacturersModelName": "Ingenia_CX", - "InstitutionName": "Tokyo_University_Hospital", - "InstitutionalDepartmentName": "Radiology", - "DeviceSerialNumber": "78091", - "StationName": "HOST-77RBK8NK2K", - "BodyPartExamined": "SPINE", - "PatientPosition": "HFS", - "SoftwareVersions": "5.3.1_5.3.1.1", - "MRAcquisitionType": "3D", - "SeriesDescription": "T1w", - "ProtocolName": "T1w", - "ScanningSequence": "GR", - "SequenceVariant": "MP", - "ScanOptions": "OTHER", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "FFE", "M", "FFE"], - "SeriesNumber": 301, - "AcquisitionTime": "18:10:42.470000", - "AcquisitionNumber": 3, - "PhilipsRescaleSlope": 2.66618, - "PhilipsRescaleIntercept": 0, - "PhilipsScaleSlope": 0.00425666, - "UsePhilipsFloatNotDisplayScaling": 1, - "SliceThickness": 1, - "SpacingBetweenSlices": 1, - "SAR": 0.0334169, - "EchoTime": 0.003545, - "RepetitionTime": 0.0076215, - "FlipAngle": 9, - "CoilString": "MULTI_COIL", - "PercentPhaseFOV": 81.25, - "EchoTrainLength": 246, - "PhaseEncodingSteps": 320, - "AcquisitionMatrixPE": 320, - "ReconMatrixPE": 320, - "PixelBandwidth": 191, - "ImageOrientationPatientDICOM": [ - -0.0787809, - 0.996891, - 0.0010786, - -0.0326086, - -0.00149556, - -0.999467 ], - "InPlanePhaseEncodingDirectionDICOM": "ROW", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 127.762, + "Manufacturer": "Philips", + "ManufacturersModelName": "Ingenia_CX", + "InstitutionName": "Tokyo_University_Hospital", + "InstitutionalDepartmentName": "Radiology", + "DeviceSerialNumber": "78091", + "StationName": "HOST-77RBK8NK2K", + "BodyPartExamined": "SPINE", + "PatientPosition": "HFS", + "SoftwareVersions": "5.3.1_5.3.1.1", + "MRAcquisitionType": "3D", + "SeriesDescription": "T1w", + "ProtocolName": "T1w", + "ScanningSequence": "GR", + "SequenceVariant": "MP", + "ScanOptions": "OTHER", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "FFE", + "M", + "FFE" + ], + "SeriesNumber": 301, + "AcquisitionTime": "18:10:42.470000", + "AcquisitionNumber": 3, + "PhilipsRescaleSlope": 2.66618, + "PhilipsRescaleIntercept": 0, + "PhilipsScaleSlope": 0.00425666, + "UsePhilipsFloatNotDisplayScaling": 1, + "SliceThickness": 1, + "SpacingBetweenSlices": 1, + "SAR": 0.0334169, + "EchoTime": 0.003545, + "RepetitionTime": 0.0076215, + "FlipAngle": 9, + "CoilString": "MULTI_COIL", + "PercentPhaseFOV": 81.25, + "EchoTrainLength": 246, + "PhaseEncodingSteps": 320, + "AcquisitionMatrixPE": 320, + "ReconMatrixPE": 320, + "PixelBandwidth": 191, + "ImageOrientationPatientDICOM": [ + -0.0787809, + 0.996891, + 0.0010786, + -0.0326086, + -0.00149556, + -0.999467 + ], + "InPlanePhaseEncodingDirectionDICOM": "ROW", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-tokyoIngenia06/anat/sub-tokyoIngenia06_space-other_T2star.json b/derivatives/data_preprocessed/sub-tokyoIngenia06/anat/sub-tokyoIngenia06_space-other_T2star.json index e2478f7a83..094e4dcbd4 100644 --- a/derivatives/data_preprocessed/sub-tokyoIngenia06/anat/sub-tokyoIngenia06_space-other_T2star.json +++ b/derivatives/data_preprocessed/sub-tokyoIngenia06/anat/sub-tokyoIngenia06_space-other_T2star.json @@ -58,5 +58,9 @@ "InPlanePhaseEncodingDirectionDICOM": "COL", "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0", - "AcquisitionDuration": 242.5 + "AcquisitionDuration": 242.5, + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-tokyoIngenia06/anat/sub-tokyoIngenia06_space-other_T2w.json b/derivatives/data_preprocessed/sub-tokyoIngenia06/anat/sub-tokyoIngenia06_space-other_T2w.json index 2a90ba3ebe..fffe704b1b 100644 --- a/derivatives/data_preprocessed/sub-tokyoIngenia06/anat/sub-tokyoIngenia06_space-other_T2w.json +++ b/derivatives/data_preprocessed/sub-tokyoIngenia06/anat/sub-tokyoIngenia06_space-other_T2w.json @@ -1,51 +1,63 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 127.762, - "Manufacturer": "Philips", - "ManufacturersModelName": "Ingenia_CX", - "InstitutionName": "Tokyo_University_Hospital", - "InstitutionalDepartmentName": "Radiology", - "DeviceSerialNumber": "78091", - "StationName": "HOST-77RBK8NK2K", - "BodyPartExamined": "SPINE", - "PatientPosition": "HFS", - "SoftwareVersions": "5.3.1_5.3.1.1", - "MRAcquisitionType": "3D", - "SeriesDescription": "T2w", - "ProtocolName": "T2w", - "ScanningSequence": "SE", - "SequenceVariant": "SK", - "ScanOptions": "PFP", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "SE", "M", "SE"], - "SeriesNumber": 401, - "AcquisitionTime": "18:15:20.000000", - "AcquisitionNumber": 4, - "PhilipsRescaleSlope": 1.45055, - "PhilipsRescaleIntercept": 0, - "PhilipsScaleSlope": 0.00110051, - "UsePhilipsFloatNotDisplayScaling": 1, - "SliceThickness": 0.8, - "SpacingBetweenSlices": 0.8, - "SAR": 1.29942, - "EchoTime": 0.12, - "RepetitionTime": 3.5, - "FlipAngle": 90, - "CoilString": "MULTI_COIL", - "PercentPhaseFOV": 92.5, - "EchoTrainLength": 92, - "PhaseEncodingSteps": 316, - "AcquisitionMatrixPE": 316, - "ReconMatrixPE": 320, - "PixelBandwidth": 367, - "ImageOrientationPatientDICOM": [ - -0.053446, - 0.99857, - 0.0010786, - -0.0326361, - -0.0006672, - -0.999467 ], - "InPlanePhaseEncodingDirectionDICOM": "ROW", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 127.762, + "Manufacturer": "Philips", + "ManufacturersModelName": "Ingenia_CX", + "InstitutionName": "Tokyo_University_Hospital", + "InstitutionalDepartmentName": "Radiology", + "DeviceSerialNumber": "78091", + "StationName": "HOST-77RBK8NK2K", + "BodyPartExamined": "SPINE", + "PatientPosition": "HFS", + "SoftwareVersions": "5.3.1_5.3.1.1", + "MRAcquisitionType": "3D", + "SeriesDescription": "T2w", + "ProtocolName": "T2w", + "ScanningSequence": "SE", + "SequenceVariant": "SK", + "ScanOptions": "PFP", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "SE", + "M", + "SE" + ], + "SeriesNumber": 401, + "AcquisitionTime": "18:15:20.000000", + "AcquisitionNumber": 4, + "PhilipsRescaleSlope": 1.45055, + "PhilipsRescaleIntercept": 0, + "PhilipsScaleSlope": 0.00110051, + "UsePhilipsFloatNotDisplayScaling": 1, + "SliceThickness": 0.8, + "SpacingBetweenSlices": 0.8, + "SAR": 1.29942, + "EchoTime": 0.12, + "RepetitionTime": 3.5, + "FlipAngle": 90, + "CoilString": "MULTI_COIL", + "PercentPhaseFOV": 92.5, + "EchoTrainLength": 92, + "PhaseEncodingSteps": 316, + "AcquisitionMatrixPE": 316, + "ReconMatrixPE": 320, + "PixelBandwidth": 367, + "ImageOrientationPatientDICOM": [ + -0.053446, + 0.99857, + 0.0010786, + -0.0326361, + -0.0006672, + -0.999467 + ], + "InPlanePhaseEncodingDirectionDICOM": "ROW", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-tokyoIngenia07/anat/sub-tokyoIngenia07_flip-1_mt-on_space-other_MTS.json b/derivatives/data_preprocessed/sub-tokyoIngenia07/anat/sub-tokyoIngenia07_flip-1_mt-on_space-other_MTS.json index 2141f4d5a0..8bd62acff2 100644 --- a/derivatives/data_preprocessed/sub-tokyoIngenia07/anat/sub-tokyoIngenia07_flip-1_mt-on_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-tokyoIngenia07/anat/sub-tokyoIngenia07_flip-1_mt-on_space-other_MTS.json @@ -1,50 +1,61 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 127.763, - "Manufacturer": "Philips", - "ManufacturersModelName": "Ingenia_CX", - "InstitutionName": "Tokyo_University_Hospital", - "InstitutionalDepartmentName": "Radiology", - "DeviceSerialNumber": "78091", - "StationName": "HOST-77RBK8NK2K", - "BodyPartExamined": "SPINE", - "PatientPosition": "HFS", - "SoftwareVersions": "5.3.1_5.3.1.1", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-MT", - "ProtocolName": "GRE-MT", - "ScanningSequence": "GR", - "SequenceVariant": "SP", - "ScanOptions": "PFF", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "FFE", "M", "FFE"], - "SeriesNumber": 601, - "AcquisitionTime": "17:40:29.000000", - "AcquisitionNumber": 6, - "PhilipsRescaleSlope": 1.74676, - "PhilipsRescaleIntercept": 0, - "PhilipsScaleSlope": 0.000700912, - "UsePhilipsFloatNotDisplayScaling": 1, - "SliceThickness": 5, - "SpacingBetweenSlices": 5, - "SAR": 2.35918, - "EchoTime": 0.002001, - "RepetitionTime": 0.057, - "FlipAngle": 9, - "CoilString": "MULTI_COIL", - "PercentPhaseFOV": 100, - "PhaseEncodingSteps": 256, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 256, - "PixelBandwidth": 261, - "ImageOrientationPatientDICOM": [ - 0.999945, - 0.00116765, - -0.0104569, - -0.000526188, - 0.998129, - 0.0611369 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 127.763, + "Manufacturer": "Philips", + "ManufacturersModelName": "Ingenia_CX", + "InstitutionName": "Tokyo_University_Hospital", + "InstitutionalDepartmentName": "Radiology", + "DeviceSerialNumber": "78091", + "StationName": "HOST-77RBK8NK2K", + "BodyPartExamined": "SPINE", + "PatientPosition": "HFS", + "SoftwareVersions": "5.3.1_5.3.1.1", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-MT", + "ProtocolName": "GRE-MT", + "ScanningSequence": "GR", + "SequenceVariant": "SP", + "ScanOptions": "PFF", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "FFE", + "M", + "FFE" + ], + "SeriesNumber": 601, + "AcquisitionTime": "17:40:29.000000", + "AcquisitionNumber": 6, + "PhilipsRescaleSlope": 1.74676, + "PhilipsRescaleIntercept": 0, + "PhilipsScaleSlope": 0.000700912, + "UsePhilipsFloatNotDisplayScaling": 1, + "SliceThickness": 5, + "SpacingBetweenSlices": 5, + "SAR": 2.35918, + "EchoTime": 0.002001, + "RepetitionTime": 0.057, + "FlipAngle": 9, + "CoilString": "MULTI_COIL", + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 256, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "PixelBandwidth": 261, + "ImageOrientationPatientDICOM": [ + 0.999945, + 0.00116765, + -0.0104569, + -0.000526188, + 0.998129, + 0.0611369 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-tokyoIngenia07/anat/sub-tokyoIngenia07_flip-2_mt-off_space-other_MTS.json b/derivatives/data_preprocessed/sub-tokyoIngenia07/anat/sub-tokyoIngenia07_flip-2_mt-off_space-other_MTS.json index 99cf55bf86..54fdd70416 100644 --- a/derivatives/data_preprocessed/sub-tokyoIngenia07/anat/sub-tokyoIngenia07_flip-2_mt-off_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-tokyoIngenia07/anat/sub-tokyoIngenia07_flip-2_mt-off_space-other_MTS.json @@ -1,50 +1,61 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 127.763, - "Manufacturer": "Philips", - "ManufacturersModelName": "Ingenia_CX", - "InstitutionName": "Tokyo_University_Hospital", - "InstitutionalDepartmentName": "Radiology", - "DeviceSerialNumber": "78091", - "StationName": "HOST-77RBK8NK2K", - "BodyPartExamined": "SPINE", - "PatientPosition": "HFS", - "SoftwareVersions": "5.3.1_5.3.1.1", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-T1", - "ProtocolName": "GRE-T1", - "ScanningSequence": "GR", - "SequenceVariant": "SP", - "ScanOptions": "PFF", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "FFE", "M", "FFE"], - "SeriesNumber": 701, - "AcquisitionTime": "17:44:54.590000", - "AcquisitionNumber": 7, - "PhilipsRescaleSlope": 1.87082, - "PhilipsRescaleIntercept": 0, - "PhilipsScaleSlope": 0.000700912, - "UsePhilipsFloatNotDisplayScaling": 1, - "SliceThickness": 5, - "SpacingBetweenSlices": 5, - "SAR": 0.284064, - "EchoTime": 0.002001, - "RepetitionTime": 0.015, - "FlipAngle": 15, - "CoilString": "MULTI_COIL", - "PercentPhaseFOV": 100, - "PhaseEncodingSteps": 256, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 256, - "PixelBandwidth": 261, - "ImageOrientationPatientDICOM": [ - 0.999945, - 0.00116765, - -0.0104569, - -0.000526188, - 0.998129, - 0.0611369 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 127.763, + "Manufacturer": "Philips", + "ManufacturersModelName": "Ingenia_CX", + "InstitutionName": "Tokyo_University_Hospital", + "InstitutionalDepartmentName": "Radiology", + "DeviceSerialNumber": "78091", + "StationName": "HOST-77RBK8NK2K", + "BodyPartExamined": "SPINE", + "PatientPosition": "HFS", + "SoftwareVersions": "5.3.1_5.3.1.1", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-T1", + "ProtocolName": "GRE-T1", + "ScanningSequence": "GR", + "SequenceVariant": "SP", + "ScanOptions": "PFF", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "FFE", + "M", + "FFE" + ], + "SeriesNumber": 701, + "AcquisitionTime": "17:44:54.590000", + "AcquisitionNumber": 7, + "PhilipsRescaleSlope": 1.87082, + "PhilipsRescaleIntercept": 0, + "PhilipsScaleSlope": 0.000700912, + "UsePhilipsFloatNotDisplayScaling": 1, + "SliceThickness": 5, + "SpacingBetweenSlices": 5, + "SAR": 0.284064, + "EchoTime": 0.002001, + "RepetitionTime": 0.015, + "FlipAngle": 15, + "CoilString": "MULTI_COIL", + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 256, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "PixelBandwidth": 261, + "ImageOrientationPatientDICOM": [ + 0.999945, + 0.00116765, + -0.0104569, + -0.000526188, + 0.998129, + 0.0611369 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-tokyoIngenia07/anat/sub-tokyoIngenia07_space-other_T1w.json b/derivatives/data_preprocessed/sub-tokyoIngenia07/anat/sub-tokyoIngenia07_space-other_T1w.json index 4d9a433f5c..a910abaa77 100644 --- a/derivatives/data_preprocessed/sub-tokyoIngenia07/anat/sub-tokyoIngenia07_space-other_T1w.json +++ b/derivatives/data_preprocessed/sub-tokyoIngenia07/anat/sub-tokyoIngenia07_space-other_T1w.json @@ -1,51 +1,63 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 127.762, - "Manufacturer": "Philips", - "ManufacturersModelName": "Ingenia_CX", - "InstitutionName": "Tokyo_University_Hospital", - "InstitutionalDepartmentName": "Radiology", - "DeviceSerialNumber": "78091", - "StationName": "HOST-77RBK8NK2K", - "BodyPartExamined": "SPINE", - "PatientPosition": "HFS", - "SoftwareVersions": "5.3.1_5.3.1.1", - "MRAcquisitionType": "3D", - "SeriesDescription": "T1w", - "ProtocolName": "T1w", - "ScanningSequence": "GR", - "SequenceVariant": "MP", - "ScanOptions": "OTHER", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "FFE", "M", "FFE"], - "SeriesNumber": 301, - "AcquisitionTime": "17:20:7.250000", - "AcquisitionNumber": 3, - "PhilipsRescaleSlope": 3.96239, - "PhilipsRescaleIntercept": 0, - "PhilipsScaleSlope": 0.00385683, - "UsePhilipsFloatNotDisplayScaling": 1, - "SliceThickness": 1, - "SpacingBetweenSlices": 1, - "SAR": 0.0334169, - "EchoTime": 0.003544, - "RepetitionTime": 0.0076432, - "FlipAngle": 9, - "CoilString": "MULTI_COIL", - "PercentPhaseFOV": 81.25, - "EchoTrainLength": 246, - "PhaseEncodingSteps": 320, - "AcquisitionMatrixPE": 320, - "ReconMatrixPE": 320, - "PixelBandwidth": 191, - "ImageOrientationPatientDICOM": [ - 1.26116e-16, - 1, - 1.23464e-16, - 0.00860639, - 1.22374e-16, - -0.999963 ], - "InPlanePhaseEncodingDirectionDICOM": "ROW", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 127.762, + "Manufacturer": "Philips", + "ManufacturersModelName": "Ingenia_CX", + "InstitutionName": "Tokyo_University_Hospital", + "InstitutionalDepartmentName": "Radiology", + "DeviceSerialNumber": "78091", + "StationName": "HOST-77RBK8NK2K", + "BodyPartExamined": "SPINE", + "PatientPosition": "HFS", + "SoftwareVersions": "5.3.1_5.3.1.1", + "MRAcquisitionType": "3D", + "SeriesDescription": "T1w", + "ProtocolName": "T1w", + "ScanningSequence": "GR", + "SequenceVariant": "MP", + "ScanOptions": "OTHER", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "FFE", + "M", + "FFE" + ], + "SeriesNumber": 301, + "AcquisitionTime": "17:20:7.250000", + "AcquisitionNumber": 3, + "PhilipsRescaleSlope": 3.96239, + "PhilipsRescaleIntercept": 0, + "PhilipsScaleSlope": 0.00385683, + "UsePhilipsFloatNotDisplayScaling": 1, + "SliceThickness": 1, + "SpacingBetweenSlices": 1, + "SAR": 0.0334169, + "EchoTime": 0.003544, + "RepetitionTime": 0.0076432, + "FlipAngle": 9, + "CoilString": "MULTI_COIL", + "PercentPhaseFOV": 81.25, + "EchoTrainLength": 246, + "PhaseEncodingSteps": 320, + "AcquisitionMatrixPE": 320, + "ReconMatrixPE": 320, + "PixelBandwidth": 191, + "ImageOrientationPatientDICOM": [ + 1.26116e-16, + 1, + 1.23464e-16, + 0.00860639, + 1.22374e-16, + -0.999963 + ], + "InPlanePhaseEncodingDirectionDICOM": "ROW", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-tokyoIngenia07/anat/sub-tokyoIngenia07_space-other_T2star.json b/derivatives/data_preprocessed/sub-tokyoIngenia07/anat/sub-tokyoIngenia07_space-other_T2star.json index fd54255cd5..0222260e77 100644 --- a/derivatives/data_preprocessed/sub-tokyoIngenia07/anat/sub-tokyoIngenia07_space-other_T2star.json +++ b/derivatives/data_preprocessed/sub-tokyoIngenia07/anat/sub-tokyoIngenia07_space-other_T2star.json @@ -58,5 +58,9 @@ "InPlanePhaseEncodingDirectionDICOM": "COL", "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0", - "AcquisitionDuration": 242.5 + "AcquisitionDuration": 242.5, + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-tokyoIngenia07/anat/sub-tokyoIngenia07_space-other_T2w.json b/derivatives/data_preprocessed/sub-tokyoIngenia07/anat/sub-tokyoIngenia07_space-other_T2w.json index 42a239ea27..446609908b 100644 --- a/derivatives/data_preprocessed/sub-tokyoIngenia07/anat/sub-tokyoIngenia07_space-other_T2w.json +++ b/derivatives/data_preprocessed/sub-tokyoIngenia07/anat/sub-tokyoIngenia07_space-other_T2w.json @@ -1,51 +1,63 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 127.762, - "Manufacturer": "Philips", - "ManufacturersModelName": "Ingenia_CX", - "InstitutionName": "Tokyo_University_Hospital", - "InstitutionalDepartmentName": "Radiology", - "DeviceSerialNumber": "78091", - "StationName": "HOST-77RBK8NK2K", - "BodyPartExamined": "SPINE", - "PatientPosition": "HFS", - "SoftwareVersions": "5.3.1_5.3.1.1", - "MRAcquisitionType": "3D", - "SeriesDescription": "T2w", - "ProtocolName": "T2w", - "ScanningSequence": "SE", - "SequenceVariant": "SK", - "ScanOptions": "PFP", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "SE", "M", "SE"], - "SeriesNumber": 401, - "AcquisitionTime": "17:25:59.390000", - "AcquisitionNumber": 4, - "PhilipsRescaleSlope": 1.39243, - "PhilipsRescaleIntercept": 0, - "PhilipsScaleSlope": 0.00108444, - "UsePhilipsFloatNotDisplayScaling": 1, - "SliceThickness": 0.8, - "SpacingBetweenSlices": 0.8, - "SAR": 1.29942, - "EchoTime": 0.12, - "RepetitionTime": 3.5, - "FlipAngle": 90, - "CoilString": "MULTI_COIL", - "PercentPhaseFOV": 92.5, - "EchoTrainLength": 92, - "PhaseEncodingSteps": 316, - "AcquisitionMatrixPE": 316, - "ReconMatrixPE": 320, - "PixelBandwidth": 367, - "ImageOrientationPatientDICOM": [ - 1.28451e-16, - 1, - 1.21033e-16, - -0.0104927, - 1.22374e-16, - -0.999945 ], - "InPlanePhaseEncodingDirectionDICOM": "ROW", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 127.762, + "Manufacturer": "Philips", + "ManufacturersModelName": "Ingenia_CX", + "InstitutionName": "Tokyo_University_Hospital", + "InstitutionalDepartmentName": "Radiology", + "DeviceSerialNumber": "78091", + "StationName": "HOST-77RBK8NK2K", + "BodyPartExamined": "SPINE", + "PatientPosition": "HFS", + "SoftwareVersions": "5.3.1_5.3.1.1", + "MRAcquisitionType": "3D", + "SeriesDescription": "T2w", + "ProtocolName": "T2w", + "ScanningSequence": "SE", + "SequenceVariant": "SK", + "ScanOptions": "PFP", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "SE", + "M", + "SE" + ], + "SeriesNumber": 401, + "AcquisitionTime": "17:25:59.390000", + "AcquisitionNumber": 4, + "PhilipsRescaleSlope": 1.39243, + "PhilipsRescaleIntercept": 0, + "PhilipsScaleSlope": 0.00108444, + "UsePhilipsFloatNotDisplayScaling": 1, + "SliceThickness": 0.8, + "SpacingBetweenSlices": 0.8, + "SAR": 1.29942, + "EchoTime": 0.12, + "RepetitionTime": 3.5, + "FlipAngle": 90, + "CoilString": "MULTI_COIL", + "PercentPhaseFOV": 92.5, + "EchoTrainLength": 92, + "PhaseEncodingSteps": 316, + "AcquisitionMatrixPE": 316, + "ReconMatrixPE": 320, + "PixelBandwidth": 367, + "ImageOrientationPatientDICOM": [ + 1.28451e-16, + 1, + 1.21033e-16, + -0.0104927, + 1.22374e-16, + -0.999945 + ], + "InPlanePhaseEncodingDirectionDICOM": "ROW", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-tokyoSkyra01/anat/sub-tokyoSkyra01_flip-1_mt-on_space-other_MTS.json b/derivatives/data_preprocessed/sub-tokyoSkyra01/anat/sub-tokyoSkyra01_flip-1_mt-on_space-other_MTS.json index 7a0a6f955c..b21ce5102c 100644 --- a/derivatives/data_preprocessed/sub-tokyoSkyra01/anat/sub-tokyoSkyra01_flip-1_mt-on_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-tokyoSkyra01/anat/sub-tokyoSkyra01_flip-1_mt-on_space-other_MTS.json @@ -1,66 +1,76 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.251, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Skyra", - "InstitutionName": "The_University_of_Tokyo_Hospital", - "InstitutionalDepartmentName": "Tokyo", - "InstitutionAddress": "Street_Hongo_Bunkyou-ku_Tokyo_JP_113-8655", - "DeviceSerialNumber": "45896", - "StationName": "AWP45896", - "BodyPartExamined": "NCK", - "PatientPosition": "HFS", - "ProcedureStepDescription": "jcohenadad_2019-01-16", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-MT1", - "ProtocolName": "GRE-MT1", - "ScanningSequence": "GR", - "SequenceVariant": "MTC_SP", - "ScanOptions": "MT", - "SequenceName": "_fl3d1", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "DIS2D"], - "SeriesNumber": 6, - "AcquisitionTime": "19:53:43.950000", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SAR": 0.71404, - "EchoTime": 0.00313, - "RepetitionTime": 0.035, - "FlipAngle": 9, - "PartialFourier": 1, - "BaseResolution": 256, - "ShimSetting": [ - 5670, - 4997, - 1824, - -728, - 526, - 4999, - -454, - -71 ], - "TxRefAmp": 385.89, - "PhaseResolution": 1, - "ReceiveCoilName": "HeadNeck_20", - "ReceiveCoilActiveElements": "HE3,4;NE1,2;SP1", - "CoilString": "HE3_4;NE1_2;SP1", - "PulseSequenceDetails": "%SiemensSeq%_gre", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 100, - "PhaseEncodingSteps": 255, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 256, - "PixelBandwidth": 260, - "DwellTime": 7.5e-06, - "ImageOrientationPatientDICOM": [ - 0.99858, - -0.00850252, - 0.0525807, - -5.45045e-08, - 0.987177, - 0.159632 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 123.251, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Skyra", + "InstitutionName": "The_University_of_Tokyo_Hospital", + "InstitutionalDepartmentName": "Tokyo", + "InstitutionAddress": "Street_Hongo_Bunkyou-ku_Tokyo_JP_113-8655", + "DeviceSerialNumber": "45896", + "StationName": "AWP45896", + "BodyPartExamined": "NCK", + "PatientPosition": "HFS", + "ProcedureStepDescription": "jcohenadad_2019-01-16", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-MT1", + "ProtocolName": "GRE-MT1", + "ScanningSequence": "GR", + "SequenceVariant": "MTC_SP", + "ScanOptions": "MT", + "SequenceName": "_fl3d1", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "DIS2D" + ], + "SeriesNumber": 6, + "AcquisitionTime": "19:53:43.950000", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SAR": 0.71404, + "EchoTime": 0.00313, + "RepetitionTime": 0.035, + "FlipAngle": 9, + "PartialFourier": 1, + "BaseResolution": 256, + "ShimSetting": [ + 5670, + 4997, + 1824, + -728, + 526, + 4999, + -454, + -71 + ], + "TxRefAmp": 385.89, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_20", + "ReceiveCoilActiveElements": "HE3,4;NE1,2;SP1", + "CoilString": "HE3_4;NE1_2;SP1", + "PulseSequenceDetails": "%SiemensSeq%_gre", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 255, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "PixelBandwidth": 260, + "DwellTime": 7.5e-06, + "ImageOrientationPatientDICOM": [ + 0.99858, + -0.00850252, + 0.0525807, + -5.45045e-08, + 0.987177, + 0.159632 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-tokyoSkyra01/anat/sub-tokyoSkyra01_flip-2_mt-off_space-other_MTS.json b/derivatives/data_preprocessed/sub-tokyoSkyra01/anat/sub-tokyoSkyra01_flip-2_mt-off_space-other_MTS.json index cb2884742b..3e6cd394e6 100644 --- a/derivatives/data_preprocessed/sub-tokyoSkyra01/anat/sub-tokyoSkyra01_flip-2_mt-off_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-tokyoSkyra01/anat/sub-tokyoSkyra01_flip-2_mt-off_space-other_MTS.json @@ -1,65 +1,75 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.251, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Skyra", - "InstitutionName": "The_University_of_Tokyo_Hospital", - "InstitutionalDepartmentName": "Tokyo", - "InstitutionAddress": "Street_Hongo_Bunkyou-ku_Tokyo_JP_113-8655", - "DeviceSerialNumber": "45896", - "StationName": "AWP45896", - "BodyPartExamined": "NCK", - "PatientPosition": "HFS", - "ProcedureStepDescription": "jcohenadad_2019-01-16", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-T1w", - "ProtocolName": "GRE-T1w", - "ScanningSequence": "GR", - "SequenceVariant": "SP", - "SequenceName": "_fl3d1", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "DIS2D"], - "SeriesNumber": 8, - "AcquisitionTime": "19:58:9.107500", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SAR": 0.0462961, - "EchoTime": 0.00313, - "RepetitionTime": 0.015, - "FlipAngle": 15, - "PartialFourier": 1, - "BaseResolution": 256, - "ShimSetting": [ - 5670, - 4997, - 1824, - -728, - 526, - 4999, - -454, - -71 ], - "TxRefAmp": 385.89, - "PhaseResolution": 1, - "ReceiveCoilName": "HeadNeck_20", - "ReceiveCoilActiveElements": "HE3,4;NE1,2;SP1", - "CoilString": "HE3_4;NE1_2;SP1", - "PulseSequenceDetails": "%SiemensSeq%_gre", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 100, - "PhaseEncodingSteps": 255, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 256, - "PixelBandwidth": 260, - "DwellTime": 7.5e-06, - "ImageOrientationPatientDICOM": [ - 0.99858, - -0.00850252, - 0.0525807, - -5.45045e-08, - 0.987177, - 0.159632 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 123.251, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Skyra", + "InstitutionName": "The_University_of_Tokyo_Hospital", + "InstitutionalDepartmentName": "Tokyo", + "InstitutionAddress": "Street_Hongo_Bunkyou-ku_Tokyo_JP_113-8655", + "DeviceSerialNumber": "45896", + "StationName": "AWP45896", + "BodyPartExamined": "NCK", + "PatientPosition": "HFS", + "ProcedureStepDescription": "jcohenadad_2019-01-16", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-T1w", + "ProtocolName": "GRE-T1w", + "ScanningSequence": "GR", + "SequenceVariant": "SP", + "SequenceName": "_fl3d1", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "DIS2D" + ], + "SeriesNumber": 8, + "AcquisitionTime": "19:58:9.107500", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SAR": 0.0462961, + "EchoTime": 0.00313, + "RepetitionTime": 0.015, + "FlipAngle": 15, + "PartialFourier": 1, + "BaseResolution": 256, + "ShimSetting": [ + 5670, + 4997, + 1824, + -728, + 526, + 4999, + -454, + -71 + ], + "TxRefAmp": 385.89, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_20", + "ReceiveCoilActiveElements": "HE3,4;NE1,2;SP1", + "CoilString": "HE3_4;NE1_2;SP1", + "PulseSequenceDetails": "%SiemensSeq%_gre", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 255, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "PixelBandwidth": 260, + "DwellTime": 7.5e-06, + "ImageOrientationPatientDICOM": [ + 0.99858, + -0.00850252, + 0.0525807, + -5.45045e-08, + 0.987177, + 0.159632 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-tokyoSkyra01/anat/sub-tokyoSkyra01_space-other_T1w.json b/derivatives/data_preprocessed/sub-tokyoSkyra01/anat/sub-tokyoSkyra01_space-other_T1w.json index d0562e5b80..746d0cb5ee 100644 --- a/derivatives/data_preprocessed/sub-tokyoSkyra01/anat/sub-tokyoSkyra01_space-other_T1w.json +++ b/derivatives/data_preprocessed/sub-tokyoSkyra01/anat/sub-tokyoSkyra01_space-other_T1w.json @@ -1,67 +1,80 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.251, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Skyra", - "InstitutionName": "The_University_of_Tokyo_Hospital", - "InstitutionalDepartmentName": "Tokyo", - "InstitutionAddress": "Street_Hongo_Bunkyou-ku_Tokyo_JP_113-8655", - "DeviceSerialNumber": "45896", - "StationName": "AWP45896", - "BodyPartExamined": "NCK", - "PatientPosition": "HFS", - "ProcedureStepDescription": "jcohenadad_2019-01-16", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "T1w", - "ProtocolName": "T1w", - "ScanningSequence": "GR_IR", - "SequenceVariant": "SK_SP_MP", - "ScanOptions": "IR", - "SequenceName": "_tfl3d1_16", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS3D", "DIS2D"], - "SeriesNumber": 3, - "AcquisitionTime": "19:37:32.050000", - "AcquisitionNumber": 1, - "SliceThickness": 1, - "SAR": 0.0877635, - "EchoTime": 0.00372, - "RepetitionTime": 2, - "InversionTime": 1, - "FlipAngle": 9, - "PartialFourier": 1, - "BaseResolution": 320, - "ShimSetting": [ - 5717, - 5057, - 1292, - 7, - 169, - -134, - 2, - -60 ], - "TxRefAmp": 382.752, - "PhaseResolution": 1, - "ReceiveCoilName": "HeadNeck_20", - "ReceiveCoilActiveElements": "HE1-4;NE1,2;SP1", - "CoilString": "HE1-4;NE1_2;SP1", - "PulseSequenceDetails": "%SiemensSeq%_tfl", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 81.25, - "PhaseEncodingSteps": 259, - "AcquisitionMatrixPE": 260, - "ReconMatrixPE": 320, - "PixelBandwidth": 150, - "DwellTime": 1.04e-05, - "ImageOrientationPatientDICOM": [ - 0, - 1, - 0, - 0.0471064, - 0, - -0.99889 ], - "InPlanePhaseEncodingDirectionDICOM": "ROW", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 123.251, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Skyra", + "InstitutionName": "The_University_of_Tokyo_Hospital", + "InstitutionalDepartmentName": "Tokyo", + "InstitutionAddress": "Street_Hongo_Bunkyou-ku_Tokyo_JP_113-8655", + "DeviceSerialNumber": "45896", + "StationName": "AWP45896", + "BodyPartExamined": "NCK", + "PatientPosition": "HFS", + "ProcedureStepDescription": "jcohenadad_2019-01-16", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "T1w", + "ProtocolName": "T1w", + "ScanningSequence": "GR_IR", + "SequenceVariant": "SK_SP_MP", + "ScanOptions": "IR", + "SequenceName": "_tfl3d1_16", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS3D", + "DIS2D" + ], + "SeriesNumber": 3, + "AcquisitionTime": "19:37:32.050000", + "AcquisitionNumber": 1, + "SliceThickness": 1, + "SAR": 0.0877635, + "EchoTime": 0.00372, + "RepetitionTime": 2, + "InversionTime": 1, + "FlipAngle": 9, + "PartialFourier": 1, + "BaseResolution": 320, + "ShimSetting": [ + 5717, + 5057, + 1292, + 7, + 169, + -134, + 2, + -60 + ], + "TxRefAmp": 382.752, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_20", + "ReceiveCoilActiveElements": "HE1-4;NE1,2;SP1", + "CoilString": "HE1-4;NE1_2;SP1", + "PulseSequenceDetails": "%SiemensSeq%_tfl", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 81.25, + "PhaseEncodingSteps": 259, + "AcquisitionMatrixPE": 260, + "ReconMatrixPE": 320, + "PixelBandwidth": 150, + "DwellTime": 1.04e-05, + "ImageOrientationPatientDICOM": [ + 0, + 1, + 0, + 0.0471064, + 0, + -0.99889 + ], + "InPlanePhaseEncodingDirectionDICOM": "ROW", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-tokyoSkyra01/anat/sub-tokyoSkyra01_space-other_T2star.json b/derivatives/data_preprocessed/sub-tokyoSkyra01/anat/sub-tokyoSkyra01_space-other_T2star.json index b41658b141..880c2ef17b 100644 --- a/derivatives/data_preprocessed/sub-tokyoSkyra01/anat/sub-tokyoSkyra01_space-other_T2star.json +++ b/derivatives/data_preprocessed/sub-tokyoSkyra01/anat/sub-tokyoSkyra01_space-other_T2star.json @@ -75,5 +75,9 @@ "InPlanePhaseEncodingDirectionDICOM": "COL", "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0", - "AcquisitionDuration": 285.0 + "AcquisitionDuration": 285.0, + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-tokyoSkyra01/anat/sub-tokyoSkyra01_space-other_T2w.json b/derivatives/data_preprocessed/sub-tokyoSkyra01/anat/sub-tokyoSkyra01_space-other_T2w.json index 3ff055ed1b..99ea9369e4 100644 --- a/derivatives/data_preprocessed/sub-tokyoSkyra01/anat/sub-tokyoSkyra01_space-other_T2w.json +++ b/derivatives/data_preprocessed/sub-tokyoSkyra01/anat/sub-tokyoSkyra01_space-other_T2w.json @@ -1,68 +1,81 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.251, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Skyra", - "InstitutionName": "The_University_of_Tokyo_Hospital", - "InstitutionalDepartmentName": "Tokyo", - "InstitutionAddress": "Street_Hongo_Bunkyou-ku_Tokyo_JP_113-8655", - "DeviceSerialNumber": "45896", - "StationName": "AWP45896", - "BodyPartExamined": "NCK", - "PatientPosition": "HFS", - "ProcedureStepDescription": "jcohenadad_2019-01-16", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "T2w", - "ProtocolName": "T2w", - "ScanningSequence": "SE", - "SequenceVariant": "SK_SP_OSP", - "ScanOptions": "PFP", - "SequenceName": "_spcR_100", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS3D", "DIS2D"], - "SeriesNumber": 4, - "AcquisitionTime": "19:42:31.032500", - "AcquisitionNumber": 1, - "SliceThickness": 0.8, - "SAR": 0.721939, - "EchoTime": 0.12, - "RepetitionTime": 1.5, - "FlipAngle": 120, - "PartialFourier": 1, - "BaseResolution": 320, - "ShimSetting": [ - 5717, - 5057, - 1292, - 7, - 169, - -134, - 2, - -60 ], - "TxRefAmp": 385.89, - "PhaseResolution": 1, - "PhaseOversampling": 0.8, - "ReceiveCoilName": "HeadNeck_20", - "ReceiveCoilActiveElements": "HE3,4;NE1,2;SP1", - "CoilString": "HE3_4;NE1_2;SP1", - "PulseSequenceDetails": "%SiemensSeq%_tse_vfl", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 100, - "EchoTrainLength": 76, - "PhaseEncodingSteps": 422, - "AcquisitionMatrixPE": 320, - "ReconMatrixPE": 320, - "PixelBandwidth": 625, - "DwellTime": 2.5e-06, - "ImageOrientationPatientDICOM": [ - 0, - 1, - 0, - 0.0471064, - 0, - -0.99889 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 123.251, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Skyra", + "InstitutionName": "The_University_of_Tokyo_Hospital", + "InstitutionalDepartmentName": "Tokyo", + "InstitutionAddress": "Street_Hongo_Bunkyou-ku_Tokyo_JP_113-8655", + "DeviceSerialNumber": "45896", + "StationName": "AWP45896", + "BodyPartExamined": "NCK", + "PatientPosition": "HFS", + "ProcedureStepDescription": "jcohenadad_2019-01-16", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "T2w", + "ProtocolName": "T2w", + "ScanningSequence": "SE", + "SequenceVariant": "SK_SP_OSP", + "ScanOptions": "PFP", + "SequenceName": "_spcR_100", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS3D", + "DIS2D" + ], + "SeriesNumber": 4, + "AcquisitionTime": "19:42:31.032500", + "AcquisitionNumber": 1, + "SliceThickness": 0.8, + "SAR": 0.721939, + "EchoTime": 0.12, + "RepetitionTime": 1.5, + "FlipAngle": 120, + "PartialFourier": 1, + "BaseResolution": 320, + "ShimSetting": [ + 5717, + 5057, + 1292, + 7, + 169, + -134, + 2, + -60 + ], + "TxRefAmp": 385.89, + "PhaseResolution": 1, + "PhaseOversampling": 0.8, + "ReceiveCoilName": "HeadNeck_20", + "ReceiveCoilActiveElements": "HE3,4;NE1,2;SP1", + "CoilString": "HE3_4;NE1_2;SP1", + "PulseSequenceDetails": "%SiemensSeq%_tse_vfl", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "EchoTrainLength": 76, + "PhaseEncodingSteps": 422, + "AcquisitionMatrixPE": 320, + "ReconMatrixPE": 320, + "PixelBandwidth": 625, + "DwellTime": 2.5e-06, + "ImageOrientationPatientDICOM": [ + 0, + 1, + 0, + 0.0471064, + 0, + -0.99889 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-tokyoSkyra02/anat/sub-tokyoSkyra02_flip-1_mt-on_space-other_MTS.json b/derivatives/data_preprocessed/sub-tokyoSkyra02/anat/sub-tokyoSkyra02_flip-1_mt-on_space-other_MTS.json index e946983174..f0c9968b3d 100644 --- a/derivatives/data_preprocessed/sub-tokyoSkyra02/anat/sub-tokyoSkyra02_flip-1_mt-on_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-tokyoSkyra02/anat/sub-tokyoSkyra02_flip-1_mt-on_space-other_MTS.json @@ -1,66 +1,76 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.251, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Skyra", - "InstitutionName": "The_University_of_Tokyo_Hospital", - "InstitutionalDepartmentName": "Tokyo", - "InstitutionAddress": "Street_Hongo_Bunkyou-ku_Tokyo_JP_113-8655", - "DeviceSerialNumber": "45896", - "StationName": "AWP45896", - "BodyPartExamined": "NCK", - "PatientPosition": "HFS", - "ProcedureStepDescription": "jcohenadad_2019-01-16", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-MT1", - "ProtocolName": "GRE-MT1", - "ScanningSequence": "GR", - "SequenceVariant": "MTC_SP", - "ScanOptions": "MT", - "SequenceName": "_fl3d1", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "DIS2D"], - "SeriesNumber": 10, - "AcquisitionTime": "17:56:43.475000", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SAR": 0.754354, - "EchoTime": 0.00313, - "RepetitionTime": 0.035, - "FlipAngle": 9, - "PartialFourier": 1, - "BaseResolution": 256, - "ShimSetting": [ - 5701, - 5408, - 1727, - -1723, - 456, - 4999, - -2125, - -337 ], - "TxRefAmp": 404.533, - "PhaseResolution": 1, - "ReceiveCoilName": "Spine_32", - "ReceiveCoilActiveElements": "HE3,4;NE1,2;SP1", - "CoilString": "HE3_4;NE1_2;SP1", - "PulseSequenceDetails": "%SiemensSeq%_gre", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 100, - "PhaseEncodingSteps": 255, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 256, - "PixelBandwidth": 260, - "DwellTime": 7.5e-06, - "ImageOrientationPatientDICOM": [ - 0.999925, - 0.00189006, - -0.0120699, - 4.03752e-08, - 0.98796, - 0.154711 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 123.251, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Skyra", + "InstitutionName": "The_University_of_Tokyo_Hospital", + "InstitutionalDepartmentName": "Tokyo", + "InstitutionAddress": "Street_Hongo_Bunkyou-ku_Tokyo_JP_113-8655", + "DeviceSerialNumber": "45896", + "StationName": "AWP45896", + "BodyPartExamined": "NCK", + "PatientPosition": "HFS", + "ProcedureStepDescription": "jcohenadad_2019-01-16", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-MT1", + "ProtocolName": "GRE-MT1", + "ScanningSequence": "GR", + "SequenceVariant": "MTC_SP", + "ScanOptions": "MT", + "SequenceName": "_fl3d1", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "DIS2D" + ], + "SeriesNumber": 10, + "AcquisitionTime": "17:56:43.475000", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SAR": 0.754354, + "EchoTime": 0.00313, + "RepetitionTime": 0.035, + "FlipAngle": 9, + "PartialFourier": 1, + "BaseResolution": 256, + "ShimSetting": [ + 5701, + 5408, + 1727, + -1723, + 456, + 4999, + -2125, + -337 + ], + "TxRefAmp": 404.533, + "PhaseResolution": 1, + "ReceiveCoilName": "Spine_32", + "ReceiveCoilActiveElements": "HE3,4;NE1,2;SP1", + "CoilString": "HE3_4;NE1_2;SP1", + "PulseSequenceDetails": "%SiemensSeq%_gre", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 255, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "PixelBandwidth": 260, + "DwellTime": 7.5e-06, + "ImageOrientationPatientDICOM": [ + 0.999925, + 0.00189006, + -0.0120699, + 4.03752e-08, + 0.98796, + 0.154711 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-tokyoSkyra02/anat/sub-tokyoSkyra02_flip-2_mt-off_space-other_MTS.json b/derivatives/data_preprocessed/sub-tokyoSkyra02/anat/sub-tokyoSkyra02_flip-2_mt-off_space-other_MTS.json index 06c3fe9af0..009ff14a48 100644 --- a/derivatives/data_preprocessed/sub-tokyoSkyra02/anat/sub-tokyoSkyra02_flip-2_mt-off_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-tokyoSkyra02/anat/sub-tokyoSkyra02_flip-2_mt-off_space-other_MTS.json @@ -1,65 +1,75 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.251, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Skyra", - "InstitutionName": "The_University_of_Tokyo_Hospital", - "InstitutionalDepartmentName": "Tokyo", - "InstitutionAddress": "Street_Hongo_Bunkyou-ku_Tokyo_JP_113-8655", - "DeviceSerialNumber": "45896", - "StationName": "AWP45896", - "BodyPartExamined": "NCK", - "PatientPosition": "HFS", - "ProcedureStepDescription": "jcohenadad_2019-01-16", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-T1w", - "ProtocolName": "GRE-T1w", - "ScanningSequence": "GR", - "SequenceVariant": "SP", - "SequenceName": "_fl3d1", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "DIS2D"], - "SeriesNumber": 8, - "AcquisitionTime": "17:50:32.097500", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SAR": 0.04891, - "EchoTime": 0.00313, - "RepetitionTime": 0.015, - "FlipAngle": 15, - "PartialFourier": 1, - "BaseResolution": 256, - "ShimSetting": [ - 5701, - 5408, - 1727, - -1723, - 456, - 4999, - -2125, - -337 ], - "TxRefAmp": 404.533, - "PhaseResolution": 1, - "ReceiveCoilName": "HeadNeck_20", - "ReceiveCoilActiveElements": "HE3,4;NE1,2;SP1", - "CoilString": "HE3_4;NE1_2;SP1", - "PulseSequenceDetails": "%SiemensSeq%_gre", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 100, - "PhaseEncodingSteps": 255, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 256, - "PixelBandwidth": 260, - "DwellTime": 7.5e-06, - "ImageOrientationPatientDICOM": [ - 0.999925, - 0.00189006, - -0.0120699, - 4.03752e-08, - 0.98796, - 0.154711 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 123.251, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Skyra", + "InstitutionName": "The_University_of_Tokyo_Hospital", + "InstitutionalDepartmentName": "Tokyo", + "InstitutionAddress": "Street_Hongo_Bunkyou-ku_Tokyo_JP_113-8655", + "DeviceSerialNumber": "45896", + "StationName": "AWP45896", + "BodyPartExamined": "NCK", + "PatientPosition": "HFS", + "ProcedureStepDescription": "jcohenadad_2019-01-16", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-T1w", + "ProtocolName": "GRE-T1w", + "ScanningSequence": "GR", + "SequenceVariant": "SP", + "SequenceName": "_fl3d1", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "DIS2D" + ], + "SeriesNumber": 8, + "AcquisitionTime": "17:50:32.097500", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SAR": 0.04891, + "EchoTime": 0.00313, + "RepetitionTime": 0.015, + "FlipAngle": 15, + "PartialFourier": 1, + "BaseResolution": 256, + "ShimSetting": [ + 5701, + 5408, + 1727, + -1723, + 456, + 4999, + -2125, + -337 + ], + "TxRefAmp": 404.533, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_20", + "ReceiveCoilActiveElements": "HE3,4;NE1,2;SP1", + "CoilString": "HE3_4;NE1_2;SP1", + "PulseSequenceDetails": "%SiemensSeq%_gre", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 255, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "PixelBandwidth": 260, + "DwellTime": 7.5e-06, + "ImageOrientationPatientDICOM": [ + 0.999925, + 0.00189006, + -0.0120699, + 4.03752e-08, + 0.98796, + 0.154711 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-tokyoSkyra02/anat/sub-tokyoSkyra02_space-other_T1w.json b/derivatives/data_preprocessed/sub-tokyoSkyra02/anat/sub-tokyoSkyra02_space-other_T1w.json index dc558af6e7..ad6039a736 100644 --- a/derivatives/data_preprocessed/sub-tokyoSkyra02/anat/sub-tokyoSkyra02_space-other_T1w.json +++ b/derivatives/data_preprocessed/sub-tokyoSkyra02/anat/sub-tokyoSkyra02_space-other_T1w.json @@ -1,67 +1,80 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.251, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Skyra", - "InstitutionName": "The_University_of_Tokyo_Hospital", - "InstitutionalDepartmentName": "Tokyo", - "InstitutionAddress": "Street_Hongo_Bunkyou-ku_Tokyo_JP_113-8655", - "DeviceSerialNumber": "45896", - "StationName": "AWP45896", - "BodyPartExamined": "NCK", - "PatientPosition": "HFS", - "ProcedureStepDescription": "jcohenadad_2019-01-16", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "T1w", - "ProtocolName": "T1w", - "ScanningSequence": "GR_IR", - "SequenceVariant": "SK_SP_MP", - "ScanOptions": "IR", - "SequenceName": "_tfl3d1_16", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS3D", "DIS2D"], - "SeriesNumber": 3, - "AcquisitionTime": "17:27:48.267500", - "AcquisitionNumber": 1, - "SliceThickness": 1, - "SAR": 0.0862712, - "EchoTime": 0.00372, - "RepetitionTime": 2, - "InversionTime": 1, - "FlipAngle": 9, - "PartialFourier": 1, - "BaseResolution": 320, - "ShimSetting": [ - 5716, - 5060, - 1288, - 1, - 171, - -130, - -18, - -59 ], - "TxRefAmp": 387.525, - "PhaseResolution": 1, - "ReceiveCoilName": "Spine_32", - "ReceiveCoilActiveElements": "HE1-4;NE1,2;SP1", - "CoilString": "HE1-4;NE1_2;SP1", - "PulseSequenceDetails": "%SiemensSeq%_tfl", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 81.25, - "PhaseEncodingSteps": 259, - "AcquisitionMatrixPE": 260, - "ReconMatrixPE": 320, - "PixelBandwidth": 150, - "DwellTime": 1.04e-05, - "ImageOrientationPatientDICOM": [ - 0, - 1, - 0, - 0, - 0, - -1 ], - "InPlanePhaseEncodingDirectionDICOM": "ROW", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 123.251, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Skyra", + "InstitutionName": "The_University_of_Tokyo_Hospital", + "InstitutionalDepartmentName": "Tokyo", + "InstitutionAddress": "Street_Hongo_Bunkyou-ku_Tokyo_JP_113-8655", + "DeviceSerialNumber": "45896", + "StationName": "AWP45896", + "BodyPartExamined": "NCK", + "PatientPosition": "HFS", + "ProcedureStepDescription": "jcohenadad_2019-01-16", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "T1w", + "ProtocolName": "T1w", + "ScanningSequence": "GR_IR", + "SequenceVariant": "SK_SP_MP", + "ScanOptions": "IR", + "SequenceName": "_tfl3d1_16", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS3D", + "DIS2D" + ], + "SeriesNumber": 3, + "AcquisitionTime": "17:27:48.267500", + "AcquisitionNumber": 1, + "SliceThickness": 1, + "SAR": 0.0862712, + "EchoTime": 0.00372, + "RepetitionTime": 2, + "InversionTime": 1, + "FlipAngle": 9, + "PartialFourier": 1, + "BaseResolution": 320, + "ShimSetting": [ + 5716, + 5060, + 1288, + 1, + 171, + -130, + -18, + -59 + ], + "TxRefAmp": 387.525, + "PhaseResolution": 1, + "ReceiveCoilName": "Spine_32", + "ReceiveCoilActiveElements": "HE1-4;NE1,2;SP1", + "CoilString": "HE1-4;NE1_2;SP1", + "PulseSequenceDetails": "%SiemensSeq%_tfl", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 81.25, + "PhaseEncodingSteps": 259, + "AcquisitionMatrixPE": 260, + "ReconMatrixPE": 320, + "PixelBandwidth": 150, + "DwellTime": 1.04e-05, + "ImageOrientationPatientDICOM": [ + 0, + 1, + 0, + 0, + 0, + -1 + ], + "InPlanePhaseEncodingDirectionDICOM": "ROW", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-tokyoSkyra02/anat/sub-tokyoSkyra02_space-other_T2star.json b/derivatives/data_preprocessed/sub-tokyoSkyra02/anat/sub-tokyoSkyra02_space-other_T2star.json index eeb6b0e86e..bbb8dd7977 100644 --- a/derivatives/data_preprocessed/sub-tokyoSkyra02/anat/sub-tokyoSkyra02_space-other_T2star.json +++ b/derivatives/data_preprocessed/sub-tokyoSkyra02/anat/sub-tokyoSkyra02_space-other_T2star.json @@ -75,5 +75,9 @@ "InPlanePhaseEncodingDirectionDICOM": "COL", "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0", - "AcquisitionDuration": 285.0 + "AcquisitionDuration": 285.0, + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-tokyoSkyra02/anat/sub-tokyoSkyra02_space-other_T2w.json b/derivatives/data_preprocessed/sub-tokyoSkyra02/anat/sub-tokyoSkyra02_space-other_T2w.json index ab576692a6..536b2936ce 100644 --- a/derivatives/data_preprocessed/sub-tokyoSkyra02/anat/sub-tokyoSkyra02_space-other_T2w.json +++ b/derivatives/data_preprocessed/sub-tokyoSkyra02/anat/sub-tokyoSkyra02_space-other_T2w.json @@ -1,68 +1,81 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.251, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Skyra", - "InstitutionName": "The_University_of_Tokyo_Hospital", - "InstitutionalDepartmentName": "Tokyo", - "InstitutionAddress": "Street_Hongo_Bunkyou-ku_Tokyo_JP_113-8655", - "DeviceSerialNumber": "45896", - "StationName": "AWP45896", - "BodyPartExamined": "NCK", - "PatientPosition": "HFS", - "ProcedureStepDescription": "jcohenadad_2019-01-16", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "T2w", - "ProtocolName": "T2w", - "ScanningSequence": "SE", - "SequenceVariant": "SK_SP_OSP", - "ScanOptions": "PFP", - "SequenceName": "_spcR_100", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS3D", "DIS2D"], - "SeriesNumber": 4, - "AcquisitionTime": "17:33:17.015000", - "AcquisitionNumber": 1, - "SliceThickness": 0.8, - "SAR": 0.7627, - "EchoTime": 0.12, - "RepetitionTime": 1.5, - "FlipAngle": 120, - "PartialFourier": 1, - "BaseResolution": 320, - "ShimSetting": [ - 5716, - 5060, - 1288, - 1, - 171, - -130, - -18, - -59 ], - "TxRefAmp": 404.533, - "PhaseResolution": 1, - "PhaseOversampling": 0.8, - "ReceiveCoilName": "Spine_32", - "ReceiveCoilActiveElements": "HE3,4;NE1,2;SP1", - "CoilString": "HE3_4;NE1_2;SP1", - "PulseSequenceDetails": "%SiemensSeq%_tse_vfl", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 100, - "EchoTrainLength": 76, - "PhaseEncodingSteps": 422, - "AcquisitionMatrixPE": 320, - "ReconMatrixPE": 320, - "PixelBandwidth": 625, - "DwellTime": 2.5e-06, - "ImageOrientationPatientDICOM": [ - 1.7e-14, - 1, - 4.897e-12, - -0.0034906, - 4.897e-12, - -0.999994 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 123.251, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Skyra", + "InstitutionName": "The_University_of_Tokyo_Hospital", + "InstitutionalDepartmentName": "Tokyo", + "InstitutionAddress": "Street_Hongo_Bunkyou-ku_Tokyo_JP_113-8655", + "DeviceSerialNumber": "45896", + "StationName": "AWP45896", + "BodyPartExamined": "NCK", + "PatientPosition": "HFS", + "ProcedureStepDescription": "jcohenadad_2019-01-16", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "T2w", + "ProtocolName": "T2w", + "ScanningSequence": "SE", + "SequenceVariant": "SK_SP_OSP", + "ScanOptions": "PFP", + "SequenceName": "_spcR_100", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS3D", + "DIS2D" + ], + "SeriesNumber": 4, + "AcquisitionTime": "17:33:17.015000", + "AcquisitionNumber": 1, + "SliceThickness": 0.8, + "SAR": 0.7627, + "EchoTime": 0.12, + "RepetitionTime": 1.5, + "FlipAngle": 120, + "PartialFourier": 1, + "BaseResolution": 320, + "ShimSetting": [ + 5716, + 5060, + 1288, + 1, + 171, + -130, + -18, + -59 + ], + "TxRefAmp": 404.533, + "PhaseResolution": 1, + "PhaseOversampling": 0.8, + "ReceiveCoilName": "Spine_32", + "ReceiveCoilActiveElements": "HE3,4;NE1,2;SP1", + "CoilString": "HE3_4;NE1_2;SP1", + "PulseSequenceDetails": "%SiemensSeq%_tse_vfl", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "EchoTrainLength": 76, + "PhaseEncodingSteps": 422, + "AcquisitionMatrixPE": 320, + "ReconMatrixPE": 320, + "PixelBandwidth": 625, + "DwellTime": 2.5e-06, + "ImageOrientationPatientDICOM": [ + 1.7e-14, + 1, + 4.897e-12, + -0.0034906, + 4.897e-12, + -0.999994 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-tokyoSkyra03/anat/sub-tokyoSkyra03_flip-1_mt-on_space-other_MTS.json b/derivatives/data_preprocessed/sub-tokyoSkyra03/anat/sub-tokyoSkyra03_flip-1_mt-on_space-other_MTS.json index 2923f3cf3a..5c87b9b102 100644 --- a/derivatives/data_preprocessed/sub-tokyoSkyra03/anat/sub-tokyoSkyra03_flip-1_mt-on_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-tokyoSkyra03/anat/sub-tokyoSkyra03_flip-1_mt-on_space-other_MTS.json @@ -1,66 +1,76 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.251, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Skyra", - "InstitutionName": "The_University_of_Tokyo_Hospital", - "InstitutionalDepartmentName": "Tokyo", - "InstitutionAddress": "Street_Hongo_Bunkyou-ku_Tokyo_JP_113-8655", - "DeviceSerialNumber": "45896", - "StationName": "AWP45896", - "BodyPartExamined": "NCK", - "PatientPosition": "HFS", - "ProcedureStepDescription": "jcohenadad_2019-01-16", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-MT1", - "ProtocolName": "GRE-MT1", - "ScanningSequence": "GR", - "SequenceVariant": "MTC_SP", - "ScanOptions": "MT", - "SequenceName": "_fl3d1", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "DIS2D"], - "SeriesNumber": 6, - "AcquisitionTime": "19:43:37.950000", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SAR": 0.85641, - "EchoTime": 0.00313, - "RepetitionTime": 0.035, - "FlipAngle": 9, - "PartialFourier": 1, - "BaseResolution": 256, - "ShimSetting": [ - 5618, - 5776, - 1862, - -2330, - -281, - 4999, - -3363, - -579 ], - "TxRefAmp": 383.294, - "PhaseResolution": 1, - "ReceiveCoilName": "Spine_32", - "ReceiveCoilActiveElements": "HE3,4;NE1,2;SP1", - "CoilString": "HE3_4;NE1_2;SP1", - "PulseSequenceDetails": "%SiemensSeq%_gre", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 100, - "PhaseEncodingSteps": 255, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 256, - "PixelBandwidth": 260, - "DwellTime": 7.5e-06, - "ImageOrientationPatientDICOM": [ - 0.999904, - -0.00178353, - 0.0137306, - 6.39934e-08, - 0.99167, - 0.128808 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 123.251, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Skyra", + "InstitutionName": "The_University_of_Tokyo_Hospital", + "InstitutionalDepartmentName": "Tokyo", + "InstitutionAddress": "Street_Hongo_Bunkyou-ku_Tokyo_JP_113-8655", + "DeviceSerialNumber": "45896", + "StationName": "AWP45896", + "BodyPartExamined": "NCK", + "PatientPosition": "HFS", + "ProcedureStepDescription": "jcohenadad_2019-01-16", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-MT1", + "ProtocolName": "GRE-MT1", + "ScanningSequence": "GR", + "SequenceVariant": "MTC_SP", + "ScanOptions": "MT", + "SequenceName": "_fl3d1", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "DIS2D" + ], + "SeriesNumber": 6, + "AcquisitionTime": "19:43:37.950000", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SAR": 0.85641, + "EchoTime": 0.00313, + "RepetitionTime": 0.035, + "FlipAngle": 9, + "PartialFourier": 1, + "BaseResolution": 256, + "ShimSetting": [ + 5618, + 5776, + 1862, + -2330, + -281, + 4999, + -3363, + -579 + ], + "TxRefAmp": 383.294, + "PhaseResolution": 1, + "ReceiveCoilName": "Spine_32", + "ReceiveCoilActiveElements": "HE3,4;NE1,2;SP1", + "CoilString": "HE3_4;NE1_2;SP1", + "PulseSequenceDetails": "%SiemensSeq%_gre", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 255, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "PixelBandwidth": 260, + "DwellTime": 7.5e-06, + "ImageOrientationPatientDICOM": [ + 0.999904, + -0.00178353, + 0.0137306, + 6.39934e-08, + 0.99167, + 0.128808 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-tokyoSkyra03/anat/sub-tokyoSkyra03_flip-2_mt-off_space-other_MTS.json b/derivatives/data_preprocessed/sub-tokyoSkyra03/anat/sub-tokyoSkyra03_flip-2_mt-off_space-other_MTS.json index c5d095add7..3c544bab1c 100644 --- a/derivatives/data_preprocessed/sub-tokyoSkyra03/anat/sub-tokyoSkyra03_flip-2_mt-off_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-tokyoSkyra03/anat/sub-tokyoSkyra03_flip-2_mt-off_space-other_MTS.json @@ -1,65 +1,75 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.251, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Skyra", - "InstitutionName": "The_University_of_Tokyo_Hospital", - "InstitutionalDepartmentName": "Tokyo", - "InstitutionAddress": "Street_Hongo_Bunkyou-ku_Tokyo_JP_113-8655", - "DeviceSerialNumber": "45896", - "StationName": "AWP45896", - "BodyPartExamined": "NCK", - "PatientPosition": "HFS", - "ProcedureStepDescription": "jcohenadad_2019-01-16", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-T1w", - "ProtocolName": "GRE-T1w", - "ScanningSequence": "GR", - "SequenceVariant": "SP", - "SequenceName": "_fl3d1", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "DIS2D"], - "SeriesNumber": 8, - "AcquisitionTime": "19:48:3.315000", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SAR": 0.055527, - "EchoTime": 0.00313, - "RepetitionTime": 0.015, - "FlipAngle": 15, - "PartialFourier": 1, - "BaseResolution": 256, - "ShimSetting": [ - 5618, - 5776, - 1862, - -2330, - -281, - 4999, - -3363, - -579 ], - "TxRefAmp": 383.294, - "PhaseResolution": 1, - "ReceiveCoilName": "HeadNeck_20", - "ReceiveCoilActiveElements": "HE3,4;NE1,2;SP1", - "CoilString": "HE3_4;NE1_2;SP1", - "PulseSequenceDetails": "%SiemensSeq%_gre", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 100, - "PhaseEncodingSteps": 255, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 256, - "PixelBandwidth": 260, - "DwellTime": 7.5e-06, - "ImageOrientationPatientDICOM": [ - 0.999904, - -0.00178353, - 0.0137306, - 6.39934e-08, - 0.99167, - 0.128808 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 123.251, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Skyra", + "InstitutionName": "The_University_of_Tokyo_Hospital", + "InstitutionalDepartmentName": "Tokyo", + "InstitutionAddress": "Street_Hongo_Bunkyou-ku_Tokyo_JP_113-8655", + "DeviceSerialNumber": "45896", + "StationName": "AWP45896", + "BodyPartExamined": "NCK", + "PatientPosition": "HFS", + "ProcedureStepDescription": "jcohenadad_2019-01-16", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-T1w", + "ProtocolName": "GRE-T1w", + "ScanningSequence": "GR", + "SequenceVariant": "SP", + "SequenceName": "_fl3d1", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "DIS2D" + ], + "SeriesNumber": 8, + "AcquisitionTime": "19:48:3.315000", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SAR": 0.055527, + "EchoTime": 0.00313, + "RepetitionTime": 0.015, + "FlipAngle": 15, + "PartialFourier": 1, + "BaseResolution": 256, + "ShimSetting": [ + 5618, + 5776, + 1862, + -2330, + -281, + 4999, + -3363, + -579 + ], + "TxRefAmp": 383.294, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_20", + "ReceiveCoilActiveElements": "HE3,4;NE1,2;SP1", + "CoilString": "HE3_4;NE1_2;SP1", + "PulseSequenceDetails": "%SiemensSeq%_gre", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 255, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "PixelBandwidth": 260, + "DwellTime": 7.5e-06, + "ImageOrientationPatientDICOM": [ + 0.999904, + -0.00178353, + 0.0137306, + 6.39934e-08, + 0.99167, + 0.128808 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-tokyoSkyra03/anat/sub-tokyoSkyra03_space-other_T1w.json b/derivatives/data_preprocessed/sub-tokyoSkyra03/anat/sub-tokyoSkyra03_space-other_T1w.json index 1addbd28a6..bec5a0ee91 100644 --- a/derivatives/data_preprocessed/sub-tokyoSkyra03/anat/sub-tokyoSkyra03_space-other_T1w.json +++ b/derivatives/data_preprocessed/sub-tokyoSkyra03/anat/sub-tokyoSkyra03_space-other_T1w.json @@ -1,67 +1,80 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.251, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Skyra", - "InstitutionName": "The_University_of_Tokyo_Hospital", - "InstitutionalDepartmentName": "Tokyo", - "InstitutionAddress": "Street_Hongo_Bunkyou-ku_Tokyo_JP_113-8655", - "DeviceSerialNumber": "45896", - "StationName": "AWP45896", - "BodyPartExamined": "NCK", - "PatientPosition": "HFS", - "ProcedureStepDescription": "jcohenadad_2019-01-16", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "T1w", - "ProtocolName": "T1w", - "ScanningSequence": "GR_IR", - "SequenceVariant": "SK_SP_MP", - "ScanOptions": "IR", - "SequenceName": "_tfl3d1_16", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS3D", "DIS2D"], - "SeriesNumber": 3, - "AcquisitionTime": "19:27:33.082500", - "AcquisitionNumber": 1, - "SliceThickness": 1, - "SAR": 0.097678, - "EchoTime": 0.00372, - "RepetitionTime": 2, - "InversionTime": 1, - "FlipAngle": 9, - "PartialFourier": 1, - "BaseResolution": 320, - "ShimSetting": [ - 5717, - 5057, - 1292, - 7, - 169, - -134, - 2, - -60 ], - "TxRefAmp": 363.518, - "PhaseResolution": 1, - "ReceiveCoilName": "Spine_32", - "ReceiveCoilActiveElements": "HE1-4;NE1,2;SP1", - "CoilString": "HE1-4;NE1_2;SP1", - "PulseSequenceDetails": "%SiemensSeq%_tfl", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 81.25, - "PhaseEncodingSteps": 259, - "AcquisitionMatrixPE": 260, - "ReconMatrixPE": 320, - "PixelBandwidth": 150, - "DwellTime": 1.04e-05, - "ImageOrientationPatientDICOM": [ - 0, - 1, - 0, - 0.0139622, - 0, - -0.999903 ], - "InPlanePhaseEncodingDirectionDICOM": "ROW", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 123.251, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Skyra", + "InstitutionName": "The_University_of_Tokyo_Hospital", + "InstitutionalDepartmentName": "Tokyo", + "InstitutionAddress": "Street_Hongo_Bunkyou-ku_Tokyo_JP_113-8655", + "DeviceSerialNumber": "45896", + "StationName": "AWP45896", + "BodyPartExamined": "NCK", + "PatientPosition": "HFS", + "ProcedureStepDescription": "jcohenadad_2019-01-16", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "T1w", + "ProtocolName": "T1w", + "ScanningSequence": "GR_IR", + "SequenceVariant": "SK_SP_MP", + "ScanOptions": "IR", + "SequenceName": "_tfl3d1_16", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS3D", + "DIS2D" + ], + "SeriesNumber": 3, + "AcquisitionTime": "19:27:33.082500", + "AcquisitionNumber": 1, + "SliceThickness": 1, + "SAR": 0.097678, + "EchoTime": 0.00372, + "RepetitionTime": 2, + "InversionTime": 1, + "FlipAngle": 9, + "PartialFourier": 1, + "BaseResolution": 320, + "ShimSetting": [ + 5717, + 5057, + 1292, + 7, + 169, + -134, + 2, + -60 + ], + "TxRefAmp": 363.518, + "PhaseResolution": 1, + "ReceiveCoilName": "Spine_32", + "ReceiveCoilActiveElements": "HE1-4;NE1,2;SP1", + "CoilString": "HE1-4;NE1_2;SP1", + "PulseSequenceDetails": "%SiemensSeq%_tfl", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 81.25, + "PhaseEncodingSteps": 259, + "AcquisitionMatrixPE": 260, + "ReconMatrixPE": 320, + "PixelBandwidth": 150, + "DwellTime": 1.04e-05, + "ImageOrientationPatientDICOM": [ + 0, + 1, + 0, + 0.0139622, + 0, + -0.999903 + ], + "InPlanePhaseEncodingDirectionDICOM": "ROW", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-tokyoSkyra03/anat/sub-tokyoSkyra03_space-other_T2star.json b/derivatives/data_preprocessed/sub-tokyoSkyra03/anat/sub-tokyoSkyra03_space-other_T2star.json index e527a81f5c..ecb5960318 100644 --- a/derivatives/data_preprocessed/sub-tokyoSkyra03/anat/sub-tokyoSkyra03_space-other_T2star.json +++ b/derivatives/data_preprocessed/sub-tokyoSkyra03/anat/sub-tokyoSkyra03_space-other_T2star.json @@ -75,5 +75,9 @@ "InPlanePhaseEncodingDirectionDICOM": "COL", "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0", - "AcquisitionDuration": 285.0 + "AcquisitionDuration": 285.0, + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-tokyoSkyra03/anat/sub-tokyoSkyra03_space-other_T2w.json b/derivatives/data_preprocessed/sub-tokyoSkyra03/anat/sub-tokyoSkyra03_space-other_T2w.json index 209c30ff71..cf81423004 100644 --- a/derivatives/data_preprocessed/sub-tokyoSkyra03/anat/sub-tokyoSkyra03_space-other_T2w.json +++ b/derivatives/data_preprocessed/sub-tokyoSkyra03/anat/sub-tokyoSkyra03_space-other_T2w.json @@ -1,68 +1,81 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.251, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Skyra", - "InstitutionName": "The_University_of_Tokyo_Hospital", - "InstitutionalDepartmentName": "Tokyo", - "InstitutionAddress": "Street_Hongo_Bunkyou-ku_Tokyo_JP_113-8655", - "DeviceSerialNumber": "45896", - "StationName": "AWP45896", - "BodyPartExamined": "NCK", - "PatientPosition": "HFS", - "ProcedureStepDescription": "jcohenadad_2019-01-16", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "T2w", - "ProtocolName": "T2w", - "ScanningSequence": "SE", - "SequenceVariant": "SK_SP_OSP", - "ScanOptions": "PFP", - "SequenceName": "_spcR_100", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS3D", "DIS2D"], - "SeriesNumber": 4, - "AcquisitionTime": "19:33:2.087500", - "AcquisitionNumber": 1, - "SliceThickness": 0.8, - "SAR": 0.865885, - "EchoTime": 0.12, - "RepetitionTime": 1.5, - "FlipAngle": 120, - "PartialFourier": 1, - "BaseResolution": 320, - "ShimSetting": [ - 5717, - 5057, - 1292, - 7, - 169, - -134, - 2, - -60 ], - "TxRefAmp": 383.294, - "PhaseResolution": 1, - "PhaseOversampling": 0.8, - "ReceiveCoilName": "Spine_32", - "ReceiveCoilActiveElements": "HE3,4;NE1,2;SP1", - "CoilString": "HE3_4;NE1_2;SP1", - "PulseSequenceDetails": "%SiemensSeq%_tse_vfl", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 100, - "EchoTrainLength": 76, - "PhaseEncodingSteps": 422, - "AcquisitionMatrixPE": 320, - "ReconMatrixPE": 320, - "PixelBandwidth": 625, - "DwellTime": 2.5e-06, - "ImageOrientationPatientDICOM": [ - 0.00370291, - 0.999993, - 1.66187e-10, - 0.0330321, - -0.000122316, - -0.999454 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 123.251, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Skyra", + "InstitutionName": "The_University_of_Tokyo_Hospital", + "InstitutionalDepartmentName": "Tokyo", + "InstitutionAddress": "Street_Hongo_Bunkyou-ku_Tokyo_JP_113-8655", + "DeviceSerialNumber": "45896", + "StationName": "AWP45896", + "BodyPartExamined": "NCK", + "PatientPosition": "HFS", + "ProcedureStepDescription": "jcohenadad_2019-01-16", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "T2w", + "ProtocolName": "T2w", + "ScanningSequence": "SE", + "SequenceVariant": "SK_SP_OSP", + "ScanOptions": "PFP", + "SequenceName": "_spcR_100", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS3D", + "DIS2D" + ], + "SeriesNumber": 4, + "AcquisitionTime": "19:33:2.087500", + "AcquisitionNumber": 1, + "SliceThickness": 0.8, + "SAR": 0.865885, + "EchoTime": 0.12, + "RepetitionTime": 1.5, + "FlipAngle": 120, + "PartialFourier": 1, + "BaseResolution": 320, + "ShimSetting": [ + 5717, + 5057, + 1292, + 7, + 169, + -134, + 2, + -60 + ], + "TxRefAmp": 383.294, + "PhaseResolution": 1, + "PhaseOversampling": 0.8, + "ReceiveCoilName": "Spine_32", + "ReceiveCoilActiveElements": "HE3,4;NE1,2;SP1", + "CoilString": "HE3_4;NE1_2;SP1", + "PulseSequenceDetails": "%SiemensSeq%_tse_vfl", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "EchoTrainLength": 76, + "PhaseEncodingSteps": 422, + "AcquisitionMatrixPE": 320, + "ReconMatrixPE": 320, + "PixelBandwidth": 625, + "DwellTime": 2.5e-06, + "ImageOrientationPatientDICOM": [ + 0.00370291, + 0.999993, + 1.66187e-10, + 0.0330321, + -0.000122316, + -0.999454 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-tokyoSkyra04/anat/sub-tokyoSkyra04_flip-1_mt-on_space-other_MTS.json b/derivatives/data_preprocessed/sub-tokyoSkyra04/anat/sub-tokyoSkyra04_flip-1_mt-on_space-other_MTS.json index f0b3657db8..9d8634fa23 100644 --- a/derivatives/data_preprocessed/sub-tokyoSkyra04/anat/sub-tokyoSkyra04_flip-1_mt-on_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-tokyoSkyra04/anat/sub-tokyoSkyra04_flip-1_mt-on_space-other_MTS.json @@ -1,66 +1,76 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.251, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Skyra", - "InstitutionName": "The_University_of_Tokyo_Hospital", - "InstitutionalDepartmentName": "Tokyo", - "InstitutionAddress": "Street_Hongo_Bunkyou-ku_Tokyo_JP_113-8655", - "DeviceSerialNumber": "45896", - "StationName": "AWP45896", - "BodyPartExamined": "NCK", - "PatientPosition": "HFS", - "ProcedureStepDescription": "jcohenadad_20190122", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-MT1", - "ProtocolName": "GRE-MT1", - "ScanningSequence": "GR", - "SequenceVariant": "MTC_SP", - "ScanOptions": "MT", - "SequenceName": "_fl3d1", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "DIS2D"], - "SeriesNumber": 6, - "AcquisitionTime": "19:41:14.950000", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SAR": 0.893847, - "EchoTime": 0.00313, - "RepetitionTime": 0.035, - "FlipAngle": 9, - "PartialFourier": 1, - "BaseResolution": 256, - "ShimSetting": [ - 5633, - 5369, - 1765, - -1254, - 486, - 4999, - -2182, - -398 ], - "TxRefAmp": 405.71, - "PhaseResolution": 1, - "ReceiveCoilName": "HeadNeck_20", - "ReceiveCoilActiveElements": "HE3,4;NE1,2;SP1", - "CoilString": "HE3_4;NE1_2;SP1", - "PulseSequenceDetails": "%SiemensSeq%_gre", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 100, - "PhaseEncodingSteps": 255, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 256, - "PixelBandwidth": 260, - "DwellTime": 7.5e-06, - "ImageOrientationPatientDICOM": [ - 0.99975, - 0.00384349, - -0.0220166, - 3.45699e-09, - 0.985102, - 0.171972 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 123.251, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Skyra", + "InstitutionName": "The_University_of_Tokyo_Hospital", + "InstitutionalDepartmentName": "Tokyo", + "InstitutionAddress": "Street_Hongo_Bunkyou-ku_Tokyo_JP_113-8655", + "DeviceSerialNumber": "45896", + "StationName": "AWP45896", + "BodyPartExamined": "NCK", + "PatientPosition": "HFS", + "ProcedureStepDescription": "jcohenadad_20190122", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-MT1", + "ProtocolName": "GRE-MT1", + "ScanningSequence": "GR", + "SequenceVariant": "MTC_SP", + "ScanOptions": "MT", + "SequenceName": "_fl3d1", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "DIS2D" + ], + "SeriesNumber": 6, + "AcquisitionTime": "19:41:14.950000", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SAR": 0.893847, + "EchoTime": 0.00313, + "RepetitionTime": 0.035, + "FlipAngle": 9, + "PartialFourier": 1, + "BaseResolution": 256, + "ShimSetting": [ + 5633, + 5369, + 1765, + -1254, + 486, + 4999, + -2182, + -398 + ], + "TxRefAmp": 405.71, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_20", + "ReceiveCoilActiveElements": "HE3,4;NE1,2;SP1", + "CoilString": "HE3_4;NE1_2;SP1", + "PulseSequenceDetails": "%SiemensSeq%_gre", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 255, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "PixelBandwidth": 260, + "DwellTime": 7.5e-06, + "ImageOrientationPatientDICOM": [ + 0.99975, + 0.00384349, + -0.0220166, + 3.45699e-09, + 0.985102, + 0.171972 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-tokyoSkyra04/anat/sub-tokyoSkyra04_flip-2_mt-off_space-other_MTS.json b/derivatives/data_preprocessed/sub-tokyoSkyra04/anat/sub-tokyoSkyra04_flip-2_mt-off_space-other_MTS.json index 4449d7a774..f8352d3048 100644 --- a/derivatives/data_preprocessed/sub-tokyoSkyra04/anat/sub-tokyoSkyra04_flip-2_mt-off_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-tokyoSkyra04/anat/sub-tokyoSkyra04_flip-2_mt-off_space-other_MTS.json @@ -1,65 +1,75 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.251, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Skyra", - "InstitutionName": "The_University_of_Tokyo_Hospital", - "InstitutionalDepartmentName": "Tokyo", - "InstitutionAddress": "Street_Hongo_Bunkyou-ku_Tokyo_JP_113-8655", - "DeviceSerialNumber": "45896", - "StationName": "AWP45896", - "BodyPartExamined": "NCK", - "PatientPosition": "HFS", - "ProcedureStepDescription": "jcohenadad_20190122", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-T1w", - "ProtocolName": "GRE-T1w", - "ScanningSequence": "GR", - "SequenceVariant": "SP", - "SequenceName": "_fl3d1", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "DIS2D"], - "SeriesNumber": 8, - "AcquisitionTime": "19:45:41.207500", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SAR": 0.0579543, - "EchoTime": 0.00313, - "RepetitionTime": 0.015, - "FlipAngle": 15, - "PartialFourier": 1, - "BaseResolution": 256, - "ShimSetting": [ - 5633, - 5369, - 1765, - -1254, - 486, - 4999, - -2182, - -398 ], - "TxRefAmp": 405.71, - "PhaseResolution": 1, - "ReceiveCoilName": "HeadNeck_20", - "ReceiveCoilActiveElements": "HE3,4;NE1,2;SP1", - "CoilString": "HE3_4;NE1_2;SP1", - "PulseSequenceDetails": "%SiemensSeq%_gre", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 100, - "PhaseEncodingSteps": 255, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 256, - "PixelBandwidth": 260, - "DwellTime": 7.5e-06, - "ImageOrientationPatientDICOM": [ - 0.99975, - 0.00384349, - -0.0220166, - 3.45699e-09, - 0.985102, - 0.171972 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 123.251, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Skyra", + "InstitutionName": "The_University_of_Tokyo_Hospital", + "InstitutionalDepartmentName": "Tokyo", + "InstitutionAddress": "Street_Hongo_Bunkyou-ku_Tokyo_JP_113-8655", + "DeviceSerialNumber": "45896", + "StationName": "AWP45896", + "BodyPartExamined": "NCK", + "PatientPosition": "HFS", + "ProcedureStepDescription": "jcohenadad_20190122", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-T1w", + "ProtocolName": "GRE-T1w", + "ScanningSequence": "GR", + "SequenceVariant": "SP", + "SequenceName": "_fl3d1", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "DIS2D" + ], + "SeriesNumber": 8, + "AcquisitionTime": "19:45:41.207500", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SAR": 0.0579543, + "EchoTime": 0.00313, + "RepetitionTime": 0.015, + "FlipAngle": 15, + "PartialFourier": 1, + "BaseResolution": 256, + "ShimSetting": [ + 5633, + 5369, + 1765, + -1254, + 486, + 4999, + -2182, + -398 + ], + "TxRefAmp": 405.71, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_20", + "ReceiveCoilActiveElements": "HE3,4;NE1,2;SP1", + "CoilString": "HE3_4;NE1_2;SP1", + "PulseSequenceDetails": "%SiemensSeq%_gre", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 255, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "PixelBandwidth": 260, + "DwellTime": 7.5e-06, + "ImageOrientationPatientDICOM": [ + 0.99975, + 0.00384349, + -0.0220166, + 3.45699e-09, + 0.985102, + 0.171972 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-tokyoSkyra04/anat/sub-tokyoSkyra04_space-other_T1w.json b/derivatives/data_preprocessed/sub-tokyoSkyra04/anat/sub-tokyoSkyra04_space-other_T1w.json index a6b8ba6f4e..0e03880ef3 100644 --- a/derivatives/data_preprocessed/sub-tokyoSkyra04/anat/sub-tokyoSkyra04_space-other_T1w.json +++ b/derivatives/data_preprocessed/sub-tokyoSkyra04/anat/sub-tokyoSkyra04_space-other_T1w.json @@ -1,67 +1,80 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.251, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Skyra", - "InstitutionName": "The_University_of_Tokyo_Hospital", - "InstitutionalDepartmentName": "Tokyo", - "InstitutionAddress": "Street_Hongo_Bunkyou-ku_Tokyo_JP_113-8655", - "DeviceSerialNumber": "45896", - "StationName": "AWP45896", - "BodyPartExamined": "NCK", - "PatientPosition": "HFS", - "ProcedureStepDescription": "jcohenadad_20190122", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "T1w", - "ProtocolName": "T1w", - "ScanningSequence": "GR_IR", - "SequenceVariant": "SK_SP_MP", - "ScanOptions": "IR", - "SequenceName": "_tfl3d1_16", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS3D", "DIS2D"], - "SeriesNumber": 3, - "AcquisitionTime": "19:25:35.697500", - "AcquisitionNumber": 1, - "SliceThickness": 1, - "SAR": 0.101424, - "EchoTime": 0.00372, - "RepetitionTime": 2, - "InversionTime": 1, - "FlipAngle": 9, - "PartialFourier": 1, - "BaseResolution": 320, - "ShimSetting": [ - 5717, - 5057, - 1292, - 7, - 169, - -134, - 2, - -60 ], - "TxRefAmp": 386.711, - "PhaseResolution": 1, - "ReceiveCoilName": "Spine_32", - "ReceiveCoilActiveElements": "HE1-4;NE1,2;SP1", - "CoilString": "HE1-4;NE1_2;SP1", - "PulseSequenceDetails": "%SiemensSeq%_tfl", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 81.25, - "PhaseEncodingSteps": 259, - "AcquisitionMatrixPE": 260, - "ReconMatrixPE": 320, - "PixelBandwidth": 150, - "DwellTime": 1.04e-05, - "ImageOrientationPatientDICOM": [ - 0, - 1, - 0, - -0.0226873, - 0, - -0.999743 ], - "InPlanePhaseEncodingDirectionDICOM": "ROW", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 123.251, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Skyra", + "InstitutionName": "The_University_of_Tokyo_Hospital", + "InstitutionalDepartmentName": "Tokyo", + "InstitutionAddress": "Street_Hongo_Bunkyou-ku_Tokyo_JP_113-8655", + "DeviceSerialNumber": "45896", + "StationName": "AWP45896", + "BodyPartExamined": "NCK", + "PatientPosition": "HFS", + "ProcedureStepDescription": "jcohenadad_20190122", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "T1w", + "ProtocolName": "T1w", + "ScanningSequence": "GR_IR", + "SequenceVariant": "SK_SP_MP", + "ScanOptions": "IR", + "SequenceName": "_tfl3d1_16", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS3D", + "DIS2D" + ], + "SeriesNumber": 3, + "AcquisitionTime": "19:25:35.697500", + "AcquisitionNumber": 1, + "SliceThickness": 1, + "SAR": 0.101424, + "EchoTime": 0.00372, + "RepetitionTime": 2, + "InversionTime": 1, + "FlipAngle": 9, + "PartialFourier": 1, + "BaseResolution": 320, + "ShimSetting": [ + 5717, + 5057, + 1292, + 7, + 169, + -134, + 2, + -60 + ], + "TxRefAmp": 386.711, + "PhaseResolution": 1, + "ReceiveCoilName": "Spine_32", + "ReceiveCoilActiveElements": "HE1-4;NE1,2;SP1", + "CoilString": "HE1-4;NE1_2;SP1", + "PulseSequenceDetails": "%SiemensSeq%_tfl", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 81.25, + "PhaseEncodingSteps": 259, + "AcquisitionMatrixPE": 260, + "ReconMatrixPE": 320, + "PixelBandwidth": 150, + "DwellTime": 1.04e-05, + "ImageOrientationPatientDICOM": [ + 0, + 1, + 0, + -0.0226873, + 0, + -0.999743 + ], + "InPlanePhaseEncodingDirectionDICOM": "ROW", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-tokyoSkyra04/anat/sub-tokyoSkyra04_space-other_T2star.json b/derivatives/data_preprocessed/sub-tokyoSkyra04/anat/sub-tokyoSkyra04_space-other_T2star.json index 2606e5c0ff..ddc48c3734 100644 --- a/derivatives/data_preprocessed/sub-tokyoSkyra04/anat/sub-tokyoSkyra04_space-other_T2star.json +++ b/derivatives/data_preprocessed/sub-tokyoSkyra04/anat/sub-tokyoSkyra04_space-other_T2star.json @@ -75,5 +75,9 @@ "InPlanePhaseEncodingDirectionDICOM": "COL", "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0", - "AcquisitionDuration": 285.0 + "AcquisitionDuration": 285.0, + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-tokyoSkyra04/anat/sub-tokyoSkyra04_space-other_T2w.json b/derivatives/data_preprocessed/sub-tokyoSkyra04/anat/sub-tokyoSkyra04_space-other_T2w.json index edc3b5451a..3c4b54350d 100644 --- a/derivatives/data_preprocessed/sub-tokyoSkyra04/anat/sub-tokyoSkyra04_space-other_T2w.json +++ b/derivatives/data_preprocessed/sub-tokyoSkyra04/anat/sub-tokyoSkyra04_space-other_T2w.json @@ -1,68 +1,81 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.251, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Skyra", - "InstitutionName": "The_University_of_Tokyo_Hospital", - "InstitutionalDepartmentName": "Tokyo", - "InstitutionAddress": "Street_Hongo_Bunkyou-ku_Tokyo_JP_113-8655", - "DeviceSerialNumber": "45896", - "StationName": "AWP45896", - "BodyPartExamined": "NCK", - "PatientPosition": "HFS", - "ProcedureStepDescription": "jcohenadad_20190122", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "T2w", - "ProtocolName": "T2w", - "ScanningSequence": "SE", - "SequenceVariant": "SK_SP_OSP", - "ScanOptions": "PFP", - "SequenceName": "_spcR_100", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS3D", "DIS2D"], - "SeriesNumber": 4, - "AcquisitionTime": "19:31:9.697500", - "AcquisitionNumber": 1, - "SliceThickness": 0.8, - "SAR": 0.903736, - "EchoTime": 0.12, - "RepetitionTime": 1.5, - "FlipAngle": 120, - "PartialFourier": 1, - "BaseResolution": 320, - "ShimSetting": [ - 5717, - 5057, - 1292, - 7, - 169, - -134, - 2, - -60 ], - "TxRefAmp": 405.71, - "PhaseResolution": 1, - "PhaseOversampling": 0.8, - "ReceiveCoilName": "Spine_32", - "ReceiveCoilActiveElements": "HE3,4;NE1,2;SP1", - "CoilString": "HE3_4;NE1_2;SP1", - "PulseSequenceDetails": "%SiemensSeq%_tse_vfl", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 100, - "EchoTrainLength": 76, - "PhaseEncodingSteps": 422, - "AcquisitionMatrixPE": 320, - "ReconMatrixPE": 320, - "PixelBandwidth": 625, - "DwellTime": 2.5e-06, - "ImageOrientationPatientDICOM": [ - 1.11e-13, - 1, - 4.895e-12, - -0.0226874, - 4.897e-12, - -0.999743 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 123.251, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Skyra", + "InstitutionName": "The_University_of_Tokyo_Hospital", + "InstitutionalDepartmentName": "Tokyo", + "InstitutionAddress": "Street_Hongo_Bunkyou-ku_Tokyo_JP_113-8655", + "DeviceSerialNumber": "45896", + "StationName": "AWP45896", + "BodyPartExamined": "NCK", + "PatientPosition": "HFS", + "ProcedureStepDescription": "jcohenadad_20190122", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "T2w", + "ProtocolName": "T2w", + "ScanningSequence": "SE", + "SequenceVariant": "SK_SP_OSP", + "ScanOptions": "PFP", + "SequenceName": "_spcR_100", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS3D", + "DIS2D" + ], + "SeriesNumber": 4, + "AcquisitionTime": "19:31:9.697500", + "AcquisitionNumber": 1, + "SliceThickness": 0.8, + "SAR": 0.903736, + "EchoTime": 0.12, + "RepetitionTime": 1.5, + "FlipAngle": 120, + "PartialFourier": 1, + "BaseResolution": 320, + "ShimSetting": [ + 5717, + 5057, + 1292, + 7, + 169, + -134, + 2, + -60 + ], + "TxRefAmp": 405.71, + "PhaseResolution": 1, + "PhaseOversampling": 0.8, + "ReceiveCoilName": "Spine_32", + "ReceiveCoilActiveElements": "HE3,4;NE1,2;SP1", + "CoilString": "HE3_4;NE1_2;SP1", + "PulseSequenceDetails": "%SiemensSeq%_tse_vfl", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "EchoTrainLength": 76, + "PhaseEncodingSteps": 422, + "AcquisitionMatrixPE": 320, + "ReconMatrixPE": 320, + "PixelBandwidth": 625, + "DwellTime": 2.5e-06, + "ImageOrientationPatientDICOM": [ + 1.11e-13, + 1, + 4.895e-12, + -0.0226874, + 4.897e-12, + -0.999743 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-tokyoSkyra05/anat/sub-tokyoSkyra05_flip-1_mt-on_space-other_MTS.json b/derivatives/data_preprocessed/sub-tokyoSkyra05/anat/sub-tokyoSkyra05_flip-1_mt-on_space-other_MTS.json index 7f94530f8f..6a820b9147 100644 --- a/derivatives/data_preprocessed/sub-tokyoSkyra05/anat/sub-tokyoSkyra05_flip-1_mt-on_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-tokyoSkyra05/anat/sub-tokyoSkyra05_flip-1_mt-on_space-other_MTS.json @@ -1,66 +1,76 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.251, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Skyra", - "InstitutionName": "The_University_of_Tokyo_Hospital", - "InstitutionalDepartmentName": "Tokyo", - "InstitutionAddress": "Street_Hongo_Bunkyou-ku_Tokyo_JP_113-8655", - "DeviceSerialNumber": "45896", - "StationName": "AWP45896", - "BodyPartExamined": "NCK", - "PatientPosition": "HFS", - "ProcedureStepDescription": "jcohenadad_20190122", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-MT1", - "ProtocolName": "GRE-MT1", - "ScanningSequence": "GR", - "SequenceVariant": "MTC_SP", - "ScanOptions": "MT", - "SequenceName": "_fl3d1", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "DIS2D"], - "SeriesNumber": 6, - "AcquisitionTime": "14:01:0.965000", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SAR": 0.804903, - "EchoTime": 0.00313, - "RepetitionTime": 0.035, - "FlipAngle": 9, - "PartialFourier": 1, - "BaseResolution": 256, - "ShimSetting": [ - 5716, - 5031, - 2043, - -1228, - 846, - 4999, - -179, - -253 ], - "TxRefAmp": 380.859, - "PhaseResolution": 1, - "ReceiveCoilName": "HeadNeck_20", - "ReceiveCoilActiveElements": "HE3,4;NE1,2;SP1", - "CoilString": "HE3_4;NE1_2;SP1", - "PulseSequenceDetails": "%SiemensSeq%_gre", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 100, - "PhaseEncodingSteps": 255, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 256, - "PixelBandwidth": 260, - "DwellTime": 7.5e-06, - "ImageOrientationPatientDICOM": [ - 0.999949, - 0.00252246, - -0.00982408, - 7.32434e-08, - 0.96858, - 0.248703 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 123.251, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Skyra", + "InstitutionName": "The_University_of_Tokyo_Hospital", + "InstitutionalDepartmentName": "Tokyo", + "InstitutionAddress": "Street_Hongo_Bunkyou-ku_Tokyo_JP_113-8655", + "DeviceSerialNumber": "45896", + "StationName": "AWP45896", + "BodyPartExamined": "NCK", + "PatientPosition": "HFS", + "ProcedureStepDescription": "jcohenadad_20190122", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-MT1", + "ProtocolName": "GRE-MT1", + "ScanningSequence": "GR", + "SequenceVariant": "MTC_SP", + "ScanOptions": "MT", + "SequenceName": "_fl3d1", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "DIS2D" + ], + "SeriesNumber": 6, + "AcquisitionTime": "14:01:0.965000", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SAR": 0.804903, + "EchoTime": 0.00313, + "RepetitionTime": 0.035, + "FlipAngle": 9, + "PartialFourier": 1, + "BaseResolution": 256, + "ShimSetting": [ + 5716, + 5031, + 2043, + -1228, + 846, + 4999, + -179, + -253 + ], + "TxRefAmp": 380.859, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_20", + "ReceiveCoilActiveElements": "HE3,4;NE1,2;SP1", + "CoilString": "HE3_4;NE1_2;SP1", + "PulseSequenceDetails": "%SiemensSeq%_gre", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 255, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "PixelBandwidth": 260, + "DwellTime": 7.5e-06, + "ImageOrientationPatientDICOM": [ + 0.999949, + 0.00252246, + -0.00982408, + 7.32434e-08, + 0.96858, + 0.248703 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-tokyoSkyra05/anat/sub-tokyoSkyra05_flip-2_mt-off_space-other_MTS.json b/derivatives/data_preprocessed/sub-tokyoSkyra05/anat/sub-tokyoSkyra05_flip-2_mt-off_space-other_MTS.json index 24b8914ba9..f3d90c1640 100644 --- a/derivatives/data_preprocessed/sub-tokyoSkyra05/anat/sub-tokyoSkyra05_flip-2_mt-off_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-tokyoSkyra05/anat/sub-tokyoSkyra05_flip-2_mt-off_space-other_MTS.json @@ -1,65 +1,75 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.251, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Skyra", - "InstitutionName": "The_University_of_Tokyo_Hospital", - "InstitutionalDepartmentName": "Tokyo", - "InstitutionAddress": "Street_Hongo_Bunkyou-ku_Tokyo_JP_113-8655", - "DeviceSerialNumber": "45896", - "StationName": "AWP45896", - "BodyPartExamined": "NCK", - "PatientPosition": "HFS", - "ProcedureStepDescription": "jcohenadad_20190122", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-T1w", - "ProtocolName": "GRE-T1w", - "ScanningSequence": "GR", - "SequenceVariant": "SP", - "SequenceName": "_fl3d1", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "DIS2D"], - "SeriesNumber": 8, - "AcquisitionTime": "14:05:27.002500", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SAR": 0.0521874, - "EchoTime": 0.00313, - "RepetitionTime": 0.015, - "FlipAngle": 15, - "PartialFourier": 1, - "BaseResolution": 256, - "ShimSetting": [ - 5716, - 5031, - 2043, - -1228, - 846, - 4999, - -179, - -253 ], - "TxRefAmp": 380.859, - "PhaseResolution": 1, - "ReceiveCoilName": "HeadNeck_20", - "ReceiveCoilActiveElements": "HE3,4;NE1,2;SP1", - "CoilString": "HE3_4;NE1_2;SP1", - "PulseSequenceDetails": "%SiemensSeq%_gre", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 100, - "PhaseEncodingSteps": 255, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 256, - "PixelBandwidth": 260, - "DwellTime": 7.5e-06, - "ImageOrientationPatientDICOM": [ - 0.999949, - 0.00252246, - -0.00982408, - 7.32434e-08, - 0.96858, - 0.248703 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 123.251, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Skyra", + "InstitutionName": "The_University_of_Tokyo_Hospital", + "InstitutionalDepartmentName": "Tokyo", + "InstitutionAddress": "Street_Hongo_Bunkyou-ku_Tokyo_JP_113-8655", + "DeviceSerialNumber": "45896", + "StationName": "AWP45896", + "BodyPartExamined": "NCK", + "PatientPosition": "HFS", + "ProcedureStepDescription": "jcohenadad_20190122", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-T1w", + "ProtocolName": "GRE-T1w", + "ScanningSequence": "GR", + "SequenceVariant": "SP", + "SequenceName": "_fl3d1", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "DIS2D" + ], + "SeriesNumber": 8, + "AcquisitionTime": "14:05:27.002500", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SAR": 0.0521874, + "EchoTime": 0.00313, + "RepetitionTime": 0.015, + "FlipAngle": 15, + "PartialFourier": 1, + "BaseResolution": 256, + "ShimSetting": [ + 5716, + 5031, + 2043, + -1228, + 846, + 4999, + -179, + -253 + ], + "TxRefAmp": 380.859, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_20", + "ReceiveCoilActiveElements": "HE3,4;NE1,2;SP1", + "CoilString": "HE3_4;NE1_2;SP1", + "PulseSequenceDetails": "%SiemensSeq%_gre", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 255, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "PixelBandwidth": 260, + "DwellTime": 7.5e-06, + "ImageOrientationPatientDICOM": [ + 0.999949, + 0.00252246, + -0.00982408, + 7.32434e-08, + 0.96858, + 0.248703 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-tokyoSkyra05/anat/sub-tokyoSkyra05_space-other_T1w.json b/derivatives/data_preprocessed/sub-tokyoSkyra05/anat/sub-tokyoSkyra05_space-other_T1w.json index ad159240e8..cd63dc460d 100644 --- a/derivatives/data_preprocessed/sub-tokyoSkyra05/anat/sub-tokyoSkyra05_space-other_T1w.json +++ b/derivatives/data_preprocessed/sub-tokyoSkyra05/anat/sub-tokyoSkyra05_space-other_T1w.json @@ -1,67 +1,80 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.251, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Skyra", - "InstitutionName": "The_University_of_Tokyo_Hospital", - "InstitutionalDepartmentName": "Tokyo", - "InstitutionAddress": "Street_Hongo_Bunkyou-ku_Tokyo_JP_113-8655", - "DeviceSerialNumber": "45896", - "StationName": "AWP45896", - "BodyPartExamined": "NCK", - "PatientPosition": "HFS", - "ProcedureStepDescription": "jcohenadad_20190122", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "T1w", - "ProtocolName": "T1w", - "ScanningSequence": "GR_IR", - "SequenceVariant": "SK_SP_MP", - "ScanOptions": "IR", - "SequenceName": "_tfl3d1_16", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS3D", "DIS2D"], - "SeriesNumber": 3, - "AcquisitionTime": "13:45:38.740000", - "AcquisitionNumber": 1, - "SliceThickness": 1, - "SAR": 0.106173, - "EchoTime": 0.00372, - "RepetitionTime": 2, - "InversionTime": 1, - "FlipAngle": 9, - "PartialFourier": 1, - "BaseResolution": 320, - "ShimSetting": [ - 5717, - 5057, - 1292, - 7, - 169, - -134, - 2, - -60 ], - "TxRefAmp": 384.033, - "PhaseResolution": 1, - "ReceiveCoilName": "Spine_32", - "ReceiveCoilActiveElements": "HE1-4;NE1,2;SP1", - "CoilString": "HE1-4;NE1_2;SP1", - "PulseSequenceDetails": "%SiemensSeq%_tfl", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 81.25, - "PhaseEncodingSteps": 259, - "AcquisitionMatrixPE": 260, - "ReconMatrixPE": 320, - "PixelBandwidth": 150, - "DwellTime": 1.04e-05, - "ImageOrientationPatientDICOM": [ - 0, - 1, - 0, - -0.0104717, - 0, - -0.999945 ], - "InPlanePhaseEncodingDirectionDICOM": "ROW", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 123.251, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Skyra", + "InstitutionName": "The_University_of_Tokyo_Hospital", + "InstitutionalDepartmentName": "Tokyo", + "InstitutionAddress": "Street_Hongo_Bunkyou-ku_Tokyo_JP_113-8655", + "DeviceSerialNumber": "45896", + "StationName": "AWP45896", + "BodyPartExamined": "NCK", + "PatientPosition": "HFS", + "ProcedureStepDescription": "jcohenadad_20190122", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "T1w", + "ProtocolName": "T1w", + "ScanningSequence": "GR_IR", + "SequenceVariant": "SK_SP_MP", + "ScanOptions": "IR", + "SequenceName": "_tfl3d1_16", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS3D", + "DIS2D" + ], + "SeriesNumber": 3, + "AcquisitionTime": "13:45:38.740000", + "AcquisitionNumber": 1, + "SliceThickness": 1, + "SAR": 0.106173, + "EchoTime": 0.00372, + "RepetitionTime": 2, + "InversionTime": 1, + "FlipAngle": 9, + "PartialFourier": 1, + "BaseResolution": 320, + "ShimSetting": [ + 5717, + 5057, + 1292, + 7, + 169, + -134, + 2, + -60 + ], + "TxRefAmp": 384.033, + "PhaseResolution": 1, + "ReceiveCoilName": "Spine_32", + "ReceiveCoilActiveElements": "HE1-4;NE1,2;SP1", + "CoilString": "HE1-4;NE1_2;SP1", + "PulseSequenceDetails": "%SiemensSeq%_tfl", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 81.25, + "PhaseEncodingSteps": 259, + "AcquisitionMatrixPE": 260, + "ReconMatrixPE": 320, + "PixelBandwidth": 150, + "DwellTime": 1.04e-05, + "ImageOrientationPatientDICOM": [ + 0, + 1, + 0, + -0.0104717, + 0, + -0.999945 + ], + "InPlanePhaseEncodingDirectionDICOM": "ROW", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-tokyoSkyra05/anat/sub-tokyoSkyra05_space-other_T2star.json b/derivatives/data_preprocessed/sub-tokyoSkyra05/anat/sub-tokyoSkyra05_space-other_T2star.json index 1edad239a1..d55447e5e2 100644 --- a/derivatives/data_preprocessed/sub-tokyoSkyra05/anat/sub-tokyoSkyra05_space-other_T2star.json +++ b/derivatives/data_preprocessed/sub-tokyoSkyra05/anat/sub-tokyoSkyra05_space-other_T2star.json @@ -75,5 +75,9 @@ "InPlanePhaseEncodingDirectionDICOM": "COL", "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0", - "AcquisitionDuration": 285.0 + "AcquisitionDuration": 285.0, + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-tokyoSkyra05/anat/sub-tokyoSkyra05_space-other_T2w.json b/derivatives/data_preprocessed/sub-tokyoSkyra05/anat/sub-tokyoSkyra05_space-other_T2w.json index eb97c0f345..32cec845e9 100644 --- a/derivatives/data_preprocessed/sub-tokyoSkyra05/anat/sub-tokyoSkyra05_space-other_T2w.json +++ b/derivatives/data_preprocessed/sub-tokyoSkyra05/anat/sub-tokyoSkyra05_space-other_T2w.json @@ -1,68 +1,81 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.251, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Skyra", - "InstitutionName": "The_University_of_Tokyo_Hospital", - "InstitutionalDepartmentName": "Tokyo", - "InstitutionAddress": "Street_Hongo_Bunkyou-ku_Tokyo_JP_113-8655", - "DeviceSerialNumber": "45896", - "StationName": "AWP45896", - "BodyPartExamined": "NCK", - "PatientPosition": "HFS", - "ProcedureStepDescription": "jcohenadad_20190122", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "T2w", - "ProtocolName": "T2w", - "ScanningSequence": "SE", - "SequenceVariant": "SK_SP_OSP", - "ScanOptions": "PFP", - "SequenceName": "_spcR_100", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS3D", "DIS2D"], - "SeriesNumber": 4, - "AcquisitionTime": "13:51:8.715000", - "AcquisitionNumber": 1, - "SliceThickness": 0.8, - "SAR": 0.813808, - "EchoTime": 0.12, - "RepetitionTime": 1.5, - "FlipAngle": 120, - "PartialFourier": 1, - "BaseResolution": 320, - "ShimSetting": [ - 5717, - 5057, - 1292, - 7, - 169, - -134, - 2, - -60 ], - "TxRefAmp": 380.859, - "PhaseResolution": 1, - "PhaseOversampling": 0.8, - "ReceiveCoilName": "Spine_32", - "ReceiveCoilActiveElements": "HE3,4;NE1,2;SP1", - "CoilString": "HE3_4;NE1_2;SP1", - "PulseSequenceDetails": "%SiemensSeq%_tse_vfl", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 100, - "EchoTrainLength": 76, - "PhaseEncodingSteps": 422, - "AcquisitionMatrixPE": 320, - "ReconMatrixPE": 320, - "PixelBandwidth": 625, - "DwellTime": 2.5e-06, - "ImageOrientationPatientDICOM": [ - 1.11e-13, - 1, - 4.895e-12, - -0.0226874, - 4.897e-12, - -0.999743 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 123.251, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Skyra", + "InstitutionName": "The_University_of_Tokyo_Hospital", + "InstitutionalDepartmentName": "Tokyo", + "InstitutionAddress": "Street_Hongo_Bunkyou-ku_Tokyo_JP_113-8655", + "DeviceSerialNumber": "45896", + "StationName": "AWP45896", + "BodyPartExamined": "NCK", + "PatientPosition": "HFS", + "ProcedureStepDescription": "jcohenadad_20190122", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "T2w", + "ProtocolName": "T2w", + "ScanningSequence": "SE", + "SequenceVariant": "SK_SP_OSP", + "ScanOptions": "PFP", + "SequenceName": "_spcR_100", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS3D", + "DIS2D" + ], + "SeriesNumber": 4, + "AcquisitionTime": "13:51:8.715000", + "AcquisitionNumber": 1, + "SliceThickness": 0.8, + "SAR": 0.813808, + "EchoTime": 0.12, + "RepetitionTime": 1.5, + "FlipAngle": 120, + "PartialFourier": 1, + "BaseResolution": 320, + "ShimSetting": [ + 5717, + 5057, + 1292, + 7, + 169, + -134, + 2, + -60 + ], + "TxRefAmp": 380.859, + "PhaseResolution": 1, + "PhaseOversampling": 0.8, + "ReceiveCoilName": "Spine_32", + "ReceiveCoilActiveElements": "HE3,4;NE1,2;SP1", + "CoilString": "HE3_4;NE1_2;SP1", + "PulseSequenceDetails": "%SiemensSeq%_tse_vfl", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "EchoTrainLength": 76, + "PhaseEncodingSteps": 422, + "AcquisitionMatrixPE": 320, + "ReconMatrixPE": 320, + "PixelBandwidth": 625, + "DwellTime": 2.5e-06, + "ImageOrientationPatientDICOM": [ + 1.11e-13, + 1, + 4.895e-12, + -0.0226874, + 4.897e-12, + -0.999743 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-tokyoSkyra06/anat/sub-tokyoSkyra06_flip-1_mt-on_space-other_MTS.json b/derivatives/data_preprocessed/sub-tokyoSkyra06/anat/sub-tokyoSkyra06_flip-1_mt-on_space-other_MTS.json index cd82ee03f6..f8c3a0a94e 100644 --- a/derivatives/data_preprocessed/sub-tokyoSkyra06/anat/sub-tokyoSkyra06_flip-1_mt-on_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-tokyoSkyra06/anat/sub-tokyoSkyra06_flip-1_mt-on_space-other_MTS.json @@ -1,66 +1,76 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.251, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Skyra", - "InstitutionName": "The_University_of_Tokyo_Hospital", - "InstitutionalDepartmentName": "Tokyo", - "InstitutionAddress": "Street_Hongo_Bunkyou-ku_Tokyo_JP_113-8655", - "DeviceSerialNumber": "45896", - "StationName": "AWP45896", - "BodyPartExamined": "NCK", - "PatientPosition": "HFS", - "ProcedureStepDescription": "jcohenadad_2019-01-16", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-MT1", - "ProtocolName": "GRE-MT1", - "ScanningSequence": "GR", - "SequenceVariant": "MTC_SP", - "ScanOptions": "MT", - "SequenceName": "_fl3d1", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "DIS2D"], - "SeriesNumber": 6, - "AcquisitionTime": "18:58:44.950000", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SAR": 0.859319, - "EchoTime": 0.00313, - "RepetitionTime": 0.035, - "FlipAngle": 9, - "PartialFourier": 1, - "BaseResolution": 256, - "ShimSetting": [ - 5685, - 5136, - 1756, - -1613, - 262, - 4999, - -426, - 94 ], - "TxRefAmp": 387.631, - "PhaseResolution": 1, - "ReceiveCoilName": "HeadNeck_20", - "ReceiveCoilActiveElements": "HE3,4;NE1,2", - "CoilString": "HE3_4;NE1_2", - "PulseSequenceDetails": "%SiemensSeq%_gre", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 100, - "PhaseEncodingSteps": 255, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 256, - "PixelBandwidth": 260, - "DwellTime": 7.5e-06, - "ImageOrientationPatientDICOM": [ - 0.999877, - 0.00114743, - -0.015623, - -8.66632e-09, - 0.997314, - 0.0732472 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 123.251, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Skyra", + "InstitutionName": "The_University_of_Tokyo_Hospital", + "InstitutionalDepartmentName": "Tokyo", + "InstitutionAddress": "Street_Hongo_Bunkyou-ku_Tokyo_JP_113-8655", + "DeviceSerialNumber": "45896", + "StationName": "AWP45896", + "BodyPartExamined": "NCK", + "PatientPosition": "HFS", + "ProcedureStepDescription": "jcohenadad_2019-01-16", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-MT1", + "ProtocolName": "GRE-MT1", + "ScanningSequence": "GR", + "SequenceVariant": "MTC_SP", + "ScanOptions": "MT", + "SequenceName": "_fl3d1", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "DIS2D" + ], + "SeriesNumber": 6, + "AcquisitionTime": "18:58:44.950000", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SAR": 0.859319, + "EchoTime": 0.00313, + "RepetitionTime": 0.035, + "FlipAngle": 9, + "PartialFourier": 1, + "BaseResolution": 256, + "ShimSetting": [ + 5685, + 5136, + 1756, + -1613, + 262, + 4999, + -426, + 94 + ], + "TxRefAmp": 387.631, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_20", + "ReceiveCoilActiveElements": "HE3,4;NE1,2", + "CoilString": "HE3_4;NE1_2", + "PulseSequenceDetails": "%SiemensSeq%_gre", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 255, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "PixelBandwidth": 260, + "DwellTime": 7.5e-06, + "ImageOrientationPatientDICOM": [ + 0.999877, + 0.00114743, + -0.015623, + -8.66632e-09, + 0.997314, + 0.0732472 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-tokyoSkyra06/anat/sub-tokyoSkyra06_flip-2_mt-off_space-other_MTS.json b/derivatives/data_preprocessed/sub-tokyoSkyra06/anat/sub-tokyoSkyra06_flip-2_mt-off_space-other_MTS.json index e22043d190..1026caea37 100644 --- a/derivatives/data_preprocessed/sub-tokyoSkyra06/anat/sub-tokyoSkyra06_flip-2_mt-off_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-tokyoSkyra06/anat/sub-tokyoSkyra06_flip-2_mt-off_space-other_MTS.json @@ -1,65 +1,75 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.251, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Skyra", - "InstitutionName": "The_University_of_Tokyo_Hospital", - "InstitutionalDepartmentName": "Tokyo", - "InstitutionAddress": "Street_Hongo_Bunkyou-ku_Tokyo_JP_113-8655", - "DeviceSerialNumber": "45896", - "StationName": "AWP45896", - "BodyPartExamined": "NCK", - "PatientPosition": "HFS", - "ProcedureStepDescription": "jcohenadad_2019-01-16", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-T1w", - "ProtocolName": "GRE-T1w", - "ScanningSequence": "GR", - "SequenceVariant": "SP", - "SequenceName": "_fl3d1", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "DIS2D"], - "SeriesNumber": 8, - "AcquisitionTime": "19:03:10.045000", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SAR": 0.0557156, - "EchoTime": 0.00313, - "RepetitionTime": 0.015, - "FlipAngle": 15, - "PartialFourier": 1, - "BaseResolution": 256, - "ShimSetting": [ - 5685, - 5136, - 1756, - -1613, - 262, - 4999, - -426, - 94 ], - "TxRefAmp": 387.631, - "PhaseResolution": 1, - "ReceiveCoilName": "HeadNeck_20", - "ReceiveCoilActiveElements": "HE3,4;NE1,2", - "CoilString": "HE3_4;NE1_2", - "PulseSequenceDetails": "%SiemensSeq%_gre", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 100, - "PhaseEncodingSteps": 255, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 256, - "PixelBandwidth": 260, - "DwellTime": 7.5e-06, - "ImageOrientationPatientDICOM": [ - 0.999877, - 0.00114743, - -0.015623, - -8.66632e-09, - 0.997314, - 0.0732472 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 123.251, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Skyra", + "InstitutionName": "The_University_of_Tokyo_Hospital", + "InstitutionalDepartmentName": "Tokyo", + "InstitutionAddress": "Street_Hongo_Bunkyou-ku_Tokyo_JP_113-8655", + "DeviceSerialNumber": "45896", + "StationName": "AWP45896", + "BodyPartExamined": "NCK", + "PatientPosition": "HFS", + "ProcedureStepDescription": "jcohenadad_2019-01-16", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-T1w", + "ProtocolName": "GRE-T1w", + "ScanningSequence": "GR", + "SequenceVariant": "SP", + "SequenceName": "_fl3d1", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "DIS2D" + ], + "SeriesNumber": 8, + "AcquisitionTime": "19:03:10.045000", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SAR": 0.0557156, + "EchoTime": 0.00313, + "RepetitionTime": 0.015, + "FlipAngle": 15, + "PartialFourier": 1, + "BaseResolution": 256, + "ShimSetting": [ + 5685, + 5136, + 1756, + -1613, + 262, + 4999, + -426, + 94 + ], + "TxRefAmp": 387.631, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_20", + "ReceiveCoilActiveElements": "HE3,4;NE1,2", + "CoilString": "HE3_4;NE1_2", + "PulseSequenceDetails": "%SiemensSeq%_gre", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 255, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "PixelBandwidth": 260, + "DwellTime": 7.5e-06, + "ImageOrientationPatientDICOM": [ + 0.999877, + 0.00114743, + -0.015623, + -8.66632e-09, + 0.997314, + 0.0732472 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-tokyoSkyra06/anat/sub-tokyoSkyra06_space-other_T1w.json b/derivatives/data_preprocessed/sub-tokyoSkyra06/anat/sub-tokyoSkyra06_space-other_T1w.json index ff6ac14e9b..8acce274d4 100644 --- a/derivatives/data_preprocessed/sub-tokyoSkyra06/anat/sub-tokyoSkyra06_space-other_T1w.json +++ b/derivatives/data_preprocessed/sub-tokyoSkyra06/anat/sub-tokyoSkyra06_space-other_T1w.json @@ -1,67 +1,80 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.251, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Skyra", - "InstitutionName": "The_University_of_Tokyo_Hospital", - "InstitutionalDepartmentName": "Tokyo", - "InstitutionAddress": "Street_Hongo_Bunkyou-ku_Tokyo_JP_113-8655", - "DeviceSerialNumber": "45896", - "StationName": "AWP45896", - "BodyPartExamined": "NCK", - "PatientPosition": "HFS", - "ProcedureStepDescription": "jcohenadad_2019-01-16", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "T1w", - "ProtocolName": "T1w", - "ScanningSequence": "GR_IR", - "SequenceVariant": "SK_SP_MP", - "ScanOptions": "IR", - "SequenceName": "_tfl3d1_16", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS3D", "DIS2D"], - "SeriesNumber": 3, - "AcquisitionTime": "18:43:44.082500", - "AcquisitionNumber": 1, - "SliceThickness": 1, - "SAR": 0.0968371, - "EchoTime": 0.00372, - "RepetitionTime": 2, - "InversionTime": 1, - "FlipAngle": 9, - "PartialFourier": 1, - "BaseResolution": 320, - "ShimSetting": [ - 5717, - 5057, - 1292, - 7, - 169, - -134, - 2, - -60 ], - "TxRefAmp": 366.053, - "PhaseResolution": 1, - "ReceiveCoilName": "Spine_32", - "ReceiveCoilActiveElements": "HE1-4;NE1,2;SP1", - "CoilString": "HE1-4;NE1_2;SP1", - "PulseSequenceDetails": "%SiemensSeq%_tfl", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 81.25, - "PhaseEncodingSteps": 259, - "AcquisitionMatrixPE": 260, - "ReconMatrixPE": 320, - "PixelBandwidth": 150, - "DwellTime": 1.04e-05, - "ImageOrientationPatientDICOM": [ - 0, - 1, - 0, - -0.00349062, - 0, - -0.999994 ], - "InPlanePhaseEncodingDirectionDICOM": "ROW", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 123.251, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Skyra", + "InstitutionName": "The_University_of_Tokyo_Hospital", + "InstitutionalDepartmentName": "Tokyo", + "InstitutionAddress": "Street_Hongo_Bunkyou-ku_Tokyo_JP_113-8655", + "DeviceSerialNumber": "45896", + "StationName": "AWP45896", + "BodyPartExamined": "NCK", + "PatientPosition": "HFS", + "ProcedureStepDescription": "jcohenadad_2019-01-16", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "T1w", + "ProtocolName": "T1w", + "ScanningSequence": "GR_IR", + "SequenceVariant": "SK_SP_MP", + "ScanOptions": "IR", + "SequenceName": "_tfl3d1_16", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS3D", + "DIS2D" + ], + "SeriesNumber": 3, + "AcquisitionTime": "18:43:44.082500", + "AcquisitionNumber": 1, + "SliceThickness": 1, + "SAR": 0.0968371, + "EchoTime": 0.00372, + "RepetitionTime": 2, + "InversionTime": 1, + "FlipAngle": 9, + "PartialFourier": 1, + "BaseResolution": 320, + "ShimSetting": [ + 5717, + 5057, + 1292, + 7, + 169, + -134, + 2, + -60 + ], + "TxRefAmp": 366.053, + "PhaseResolution": 1, + "ReceiveCoilName": "Spine_32", + "ReceiveCoilActiveElements": "HE1-4;NE1,2;SP1", + "CoilString": "HE1-4;NE1_2;SP1", + "PulseSequenceDetails": "%SiemensSeq%_tfl", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 81.25, + "PhaseEncodingSteps": 259, + "AcquisitionMatrixPE": 260, + "ReconMatrixPE": 320, + "PixelBandwidth": 150, + "DwellTime": 1.04e-05, + "ImageOrientationPatientDICOM": [ + 0, + 1, + 0, + -0.00349062, + 0, + -0.999994 + ], + "InPlanePhaseEncodingDirectionDICOM": "ROW", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-tokyoSkyra06/anat/sub-tokyoSkyra06_space-other_T2star.json b/derivatives/data_preprocessed/sub-tokyoSkyra06/anat/sub-tokyoSkyra06_space-other_T2star.json index 820fcf23ef..697b3abb1a 100644 --- a/derivatives/data_preprocessed/sub-tokyoSkyra06/anat/sub-tokyoSkyra06_space-other_T2star.json +++ b/derivatives/data_preprocessed/sub-tokyoSkyra06/anat/sub-tokyoSkyra06_space-other_T2star.json @@ -75,5 +75,9 @@ "InPlanePhaseEncodingDirectionDICOM": "COL", "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0", - "AcquisitionDuration": 285.0 + "AcquisitionDuration": 285.0, + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-tokyoSkyra06/anat/sub-tokyoSkyra06_space-other_T2w.json b/derivatives/data_preprocessed/sub-tokyoSkyra06/anat/sub-tokyoSkyra06_space-other_T2w.json index 381a54af6f..43d44418e1 100644 --- a/derivatives/data_preprocessed/sub-tokyoSkyra06/anat/sub-tokyoSkyra06_space-other_T2w.json +++ b/derivatives/data_preprocessed/sub-tokyoSkyra06/anat/sub-tokyoSkyra06_space-other_T2w.json @@ -1,68 +1,81 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.251, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Skyra", - "InstitutionName": "The_University_of_Tokyo_Hospital", - "InstitutionalDepartmentName": "Tokyo", - "InstitutionAddress": "Street_Hongo_Bunkyou-ku_Tokyo_JP_113-8655", - "DeviceSerialNumber": "45896", - "StationName": "AWP45896", - "BodyPartExamined": "NCK", - "PatientPosition": "HFS", - "ProcedureStepDescription": "jcohenadad_2019-01-16", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "T2w", - "ProtocolName": "T2w", - "ScanningSequence": "SE", - "SequenceVariant": "SK_SP_OSP", - "ScanOptions": "PFP", - "SequenceName": "_spcR_100", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS3D", "DIS2D"], - "SeriesNumber": 4, - "AcquisitionTime": "18:49:6.100000", - "AcquisitionNumber": 1, - "SliceThickness": 0.8, - "SAR": 0.8117, - "EchoTime": 0.12, - "RepetitionTime": 1.5, - "FlipAngle": 120, - "PartialFourier": 1, - "BaseResolution": 320, - "ShimSetting": [ - 5717, - 5057, - 1292, - 7, - 169, - -134, - 2, - -60 ], - "TxRefAmp": 378.128, - "PhaseResolution": 1, - "PhaseOversampling": 0.8, - "ReceiveCoilName": "Spine_32", - "ReceiveCoilActiveElements": "HE3,4;NE1,2;SP1", - "CoilString": "HE3_4;NE1_2;SP1", - "PulseSequenceDetails": "%SiemensSeq%_tse_vfl", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 100, - "EchoTrainLength": 76, - "PhaseEncodingSteps": 422, - "AcquisitionMatrixPE": 320, - "ReconMatrixPE": 320, - "PixelBandwidth": 625, - "DwellTime": 2.5e-06, - "ImageOrientationPatientDICOM": [ - 1.11e-13, - 1, - 4.895e-12, - -0.0226874, - 4.897e-12, - -0.999743 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 123.251, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Skyra", + "InstitutionName": "The_University_of_Tokyo_Hospital", + "InstitutionalDepartmentName": "Tokyo", + "InstitutionAddress": "Street_Hongo_Bunkyou-ku_Tokyo_JP_113-8655", + "DeviceSerialNumber": "45896", + "StationName": "AWP45896", + "BodyPartExamined": "NCK", + "PatientPosition": "HFS", + "ProcedureStepDescription": "jcohenadad_2019-01-16", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "T2w", + "ProtocolName": "T2w", + "ScanningSequence": "SE", + "SequenceVariant": "SK_SP_OSP", + "ScanOptions": "PFP", + "SequenceName": "_spcR_100", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS3D", + "DIS2D" + ], + "SeriesNumber": 4, + "AcquisitionTime": "18:49:6.100000", + "AcquisitionNumber": 1, + "SliceThickness": 0.8, + "SAR": 0.8117, + "EchoTime": 0.12, + "RepetitionTime": 1.5, + "FlipAngle": 120, + "PartialFourier": 1, + "BaseResolution": 320, + "ShimSetting": [ + 5717, + 5057, + 1292, + 7, + 169, + -134, + 2, + -60 + ], + "TxRefAmp": 378.128, + "PhaseResolution": 1, + "PhaseOversampling": 0.8, + "ReceiveCoilName": "Spine_32", + "ReceiveCoilActiveElements": "HE3,4;NE1,2;SP1", + "CoilString": "HE3_4;NE1_2;SP1", + "PulseSequenceDetails": "%SiemensSeq%_tse_vfl", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "EchoTrainLength": 76, + "PhaseEncodingSteps": 422, + "AcquisitionMatrixPE": 320, + "ReconMatrixPE": 320, + "PixelBandwidth": 625, + "DwellTime": 2.5e-06, + "ImageOrientationPatientDICOM": [ + 1.11e-13, + 1, + 4.895e-12, + -0.0226874, + 4.897e-12, + -0.999743 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-tokyoSkyra07/anat/sub-tokyoSkyra07_flip-1_mt-on_space-other_MTS.json b/derivatives/data_preprocessed/sub-tokyoSkyra07/anat/sub-tokyoSkyra07_flip-1_mt-on_space-other_MTS.json index c7a26b8cfd..73be49e406 100644 --- a/derivatives/data_preprocessed/sub-tokyoSkyra07/anat/sub-tokyoSkyra07_flip-1_mt-on_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-tokyoSkyra07/anat/sub-tokyoSkyra07_flip-1_mt-on_space-other_MTS.json @@ -1,66 +1,76 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.251, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Skyra", - "InstitutionName": "The_University_of_Tokyo_Hospital", - "InstitutionalDepartmentName": "Tokyo", - "InstitutionAddress": "Street_Hongo_Bunkyou-ku_Tokyo_JP_113-8655", - "DeviceSerialNumber": "45896", - "StationName": "AWP45896", - "BodyPartExamined": "NCK", - "PatientPosition": "HFS", - "ProcedureStepDescription": "jcohenadad_2019-01-16", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-MT1", - "ProtocolName": "GRE-MT1", - "ScanningSequence": "GR", - "SequenceVariant": "MTC_SP", - "ScanOptions": "MT", - "SequenceName": "_fl3d1", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "DIS2D"], - "SeriesNumber": 6, - "AcquisitionTime": "18:10:39.962500", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SAR": 0.782074, - "EchoTime": 0.00313, - "RepetitionTime": 0.035, - "FlipAngle": 9, - "PartialFourier": 1, - "BaseResolution": 256, - "ShimSetting": [ - 5709, - 5119, - 1734, - -1310, - 820, - 4999, - -1023, - -476 ], - "TxRefAmp": 378.486, - "PhaseResolution": 1, - "ReceiveCoilName": "HeadNeck_20", - "ReceiveCoilActiveElements": "HE3,4;NE1,2", - "CoilString": "HE3_4;NE1_2", - "PulseSequenceDetails": "%SiemensSeq%_gre", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 100, - "PhaseEncodingSteps": 255, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 256, - "PixelBandwidth": 260, - "DwellTime": 7.5e-06, - "ImageOrientationPatientDICOM": [ - 0.999743, - 0.000870529, - -0.0226539, - -8.04421e-09, - 0.999263, - 0.0383986 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 123.251, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Skyra", + "InstitutionName": "The_University_of_Tokyo_Hospital", + "InstitutionalDepartmentName": "Tokyo", + "InstitutionAddress": "Street_Hongo_Bunkyou-ku_Tokyo_JP_113-8655", + "DeviceSerialNumber": "45896", + "StationName": "AWP45896", + "BodyPartExamined": "NCK", + "PatientPosition": "HFS", + "ProcedureStepDescription": "jcohenadad_2019-01-16", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-MT1", + "ProtocolName": "GRE-MT1", + "ScanningSequence": "GR", + "SequenceVariant": "MTC_SP", + "ScanOptions": "MT", + "SequenceName": "_fl3d1", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "DIS2D" + ], + "SeriesNumber": 6, + "AcquisitionTime": "18:10:39.962500", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SAR": 0.782074, + "EchoTime": 0.00313, + "RepetitionTime": 0.035, + "FlipAngle": 9, + "PartialFourier": 1, + "BaseResolution": 256, + "ShimSetting": [ + 5709, + 5119, + 1734, + -1310, + 820, + 4999, + -1023, + -476 + ], + "TxRefAmp": 378.486, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_20", + "ReceiveCoilActiveElements": "HE3,4;NE1,2", + "CoilString": "HE3_4;NE1_2", + "PulseSequenceDetails": "%SiemensSeq%_gre", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 255, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "PixelBandwidth": 260, + "DwellTime": 7.5e-06, + "ImageOrientationPatientDICOM": [ + 0.999743, + 0.000870529, + -0.0226539, + -8.04421e-09, + 0.999263, + 0.0383986 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-tokyoSkyra07/anat/sub-tokyoSkyra07_flip-2_mt-off_space-other_MTS.json b/derivatives/data_preprocessed/sub-tokyoSkyra07/anat/sub-tokyoSkyra07_flip-2_mt-off_space-other_MTS.json index fadd3d2476..5c31d4ed83 100644 --- a/derivatives/data_preprocessed/sub-tokyoSkyra07/anat/sub-tokyoSkyra07_flip-2_mt-off_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-tokyoSkyra07/anat/sub-tokyoSkyra07_flip-2_mt-off_space-other_MTS.json @@ -1,65 +1,75 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.251, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Skyra", - "InstitutionName": "The_University_of_Tokyo_Hospital", - "InstitutionalDepartmentName": "Tokyo", - "InstitutionAddress": "Street_Hongo_Bunkyou-ku_Tokyo_JP_113-8655", - "DeviceSerialNumber": "45896", - "StationName": "AWP45896", - "BodyPartExamined": "NCK", - "PatientPosition": "HFS", - "ProcedureStepDescription": "jcohenadad_2019-01-16", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-T1w", - "ProtocolName": "GRE-T1w", - "ScanningSequence": "GR", - "SequenceVariant": "SP", - "SequenceName": "_fl3d1", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "DIS2D"], - "SeriesNumber": 8, - "AcquisitionTime": "18:15:6.097500", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SAR": 0.0507073, - "EchoTime": 0.00313, - "RepetitionTime": 0.015, - "FlipAngle": 15, - "PartialFourier": 1, - "BaseResolution": 256, - "ShimSetting": [ - 5709, - 5119, - 1734, - -1310, - 820, - 4999, - -1023, - -476 ], - "TxRefAmp": 378.486, - "PhaseResolution": 1, - "ReceiveCoilName": "HeadNeck_20", - "ReceiveCoilActiveElements": "HE3,4;NE1,2", - "CoilString": "HE3_4;NE1_2", - "PulseSequenceDetails": "%SiemensSeq%_gre", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 100, - "PhaseEncodingSteps": 255, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 256, - "PixelBandwidth": 260, - "DwellTime": 7.5e-06, - "ImageOrientationPatientDICOM": [ - 0.999743, - 0.000870529, - -0.0226539, - -8.04421e-09, - 0.999263, - 0.0383986 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 123.251, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Skyra", + "InstitutionName": "The_University_of_Tokyo_Hospital", + "InstitutionalDepartmentName": "Tokyo", + "InstitutionAddress": "Street_Hongo_Bunkyou-ku_Tokyo_JP_113-8655", + "DeviceSerialNumber": "45896", + "StationName": "AWP45896", + "BodyPartExamined": "NCK", + "PatientPosition": "HFS", + "ProcedureStepDescription": "jcohenadad_2019-01-16", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-T1w", + "ProtocolName": "GRE-T1w", + "ScanningSequence": "GR", + "SequenceVariant": "SP", + "SequenceName": "_fl3d1", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "DIS2D" + ], + "SeriesNumber": 8, + "AcquisitionTime": "18:15:6.097500", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SAR": 0.0507073, + "EchoTime": 0.00313, + "RepetitionTime": 0.015, + "FlipAngle": 15, + "PartialFourier": 1, + "BaseResolution": 256, + "ShimSetting": [ + 5709, + 5119, + 1734, + -1310, + 820, + 4999, + -1023, + -476 + ], + "TxRefAmp": 378.486, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_20", + "ReceiveCoilActiveElements": "HE3,4;NE1,2", + "CoilString": "HE3_4;NE1_2", + "PulseSequenceDetails": "%SiemensSeq%_gre", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 255, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "PixelBandwidth": 260, + "DwellTime": 7.5e-06, + "ImageOrientationPatientDICOM": [ + 0.999743, + 0.000870529, + -0.0226539, + -8.04421e-09, + 0.999263, + 0.0383986 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-tokyoSkyra07/anat/sub-tokyoSkyra07_space-other_T1w.json b/derivatives/data_preprocessed/sub-tokyoSkyra07/anat/sub-tokyoSkyra07_space-other_T1w.json index a019ed5317..48821e6df7 100644 --- a/derivatives/data_preprocessed/sub-tokyoSkyra07/anat/sub-tokyoSkyra07_space-other_T1w.json +++ b/derivatives/data_preprocessed/sub-tokyoSkyra07/anat/sub-tokyoSkyra07_space-other_T1w.json @@ -1,67 +1,80 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.251, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Skyra", - "InstitutionName": "The_University_of_Tokyo_Hospital", - "InstitutionalDepartmentName": "Tokyo", - "InstitutionAddress": "Street_Hongo_Bunkyou-ku_Tokyo_JP_113-8655", - "DeviceSerialNumber": "45896", - "StationName": "AWP45896", - "BodyPartExamined": "NCK", - "PatientPosition": "HFS", - "ProcedureStepDescription": "jcohenadad_2019-01-16", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "T1w", - "ProtocolName": "T1w", - "ScanningSequence": "GR_IR", - "SequenceVariant": "SK_SP_MP", - "ScanOptions": "IR", - "SequenceName": "_tfl3d1_16", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS3D", "DIS2D"], - "SeriesNumber": 3, - "AcquisitionTime": "17:54:11.122500", - "AcquisitionNumber": 1, - "SliceThickness": 1, - "SAR": 0.0891891, - "EchoTime": 0.00372, - "RepetitionTime": 2, - "InversionTime": 1, - "FlipAngle": 9, - "PartialFourier": 1, - "BaseResolution": 320, - "ShimSetting": [ - 5718, - 5057, - 1284, - 1, - 174, - -120, - -20, - -59 ], - "TxRefAmp": 360.222, - "PhaseResolution": 1, - "ReceiveCoilName": "Spine_32", - "ReceiveCoilActiveElements": "HE1-4;NE1,2;SP1", - "CoilString": "HE1-4;NE1_2;SP1", - "PulseSequenceDetails": "%SiemensSeq%_tfl", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 81.25, - "PhaseEncodingSteps": 259, - "AcquisitionMatrixPE": 260, - "ReconMatrixPE": 320, - "PixelBandwidth": 150, - "DwellTime": 1.04e-05, - "ImageOrientationPatientDICOM": [ - 0, - 1, - 0, - -0.0157074, - 0, - -0.999877 ], - "InPlanePhaseEncodingDirectionDICOM": "ROW", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 123.251, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Skyra", + "InstitutionName": "The_University_of_Tokyo_Hospital", + "InstitutionalDepartmentName": "Tokyo", + "InstitutionAddress": "Street_Hongo_Bunkyou-ku_Tokyo_JP_113-8655", + "DeviceSerialNumber": "45896", + "StationName": "AWP45896", + "BodyPartExamined": "NCK", + "PatientPosition": "HFS", + "ProcedureStepDescription": "jcohenadad_2019-01-16", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "T1w", + "ProtocolName": "T1w", + "ScanningSequence": "GR_IR", + "SequenceVariant": "SK_SP_MP", + "ScanOptions": "IR", + "SequenceName": "_tfl3d1_16", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS3D", + "DIS2D" + ], + "SeriesNumber": 3, + "AcquisitionTime": "17:54:11.122500", + "AcquisitionNumber": 1, + "SliceThickness": 1, + "SAR": 0.0891891, + "EchoTime": 0.00372, + "RepetitionTime": 2, + "InversionTime": 1, + "FlipAngle": 9, + "PartialFourier": 1, + "BaseResolution": 320, + "ShimSetting": [ + 5718, + 5057, + 1284, + 1, + 174, + -120, + -20, + -59 + ], + "TxRefAmp": 360.222, + "PhaseResolution": 1, + "ReceiveCoilName": "Spine_32", + "ReceiveCoilActiveElements": "HE1-4;NE1,2;SP1", + "CoilString": "HE1-4;NE1_2;SP1", + "PulseSequenceDetails": "%SiemensSeq%_tfl", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 81.25, + "PhaseEncodingSteps": 259, + "AcquisitionMatrixPE": 260, + "ReconMatrixPE": 320, + "PixelBandwidth": 150, + "DwellTime": 1.04e-05, + "ImageOrientationPatientDICOM": [ + 0, + 1, + 0, + -0.0157074, + 0, + -0.999877 + ], + "InPlanePhaseEncodingDirectionDICOM": "ROW", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-tokyoSkyra07/anat/sub-tokyoSkyra07_space-other_T2star.json b/derivatives/data_preprocessed/sub-tokyoSkyra07/anat/sub-tokyoSkyra07_space-other_T2star.json index a90d61f0e3..a4d08249be 100644 --- a/derivatives/data_preprocessed/sub-tokyoSkyra07/anat/sub-tokyoSkyra07_space-other_T2star.json +++ b/derivatives/data_preprocessed/sub-tokyoSkyra07/anat/sub-tokyoSkyra07_space-other_T2star.json @@ -75,5 +75,9 @@ "InPlanePhaseEncodingDirectionDICOM": "COL", "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0", - "AcquisitionDuration": 285.0 + "AcquisitionDuration": 285.0, + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-tokyoSkyra07/anat/sub-tokyoSkyra07_space-other_T2w.json b/derivatives/data_preprocessed/sub-tokyoSkyra07/anat/sub-tokyoSkyra07_space-other_T2w.json index 3cf819e0e5..3c8b20f777 100644 --- a/derivatives/data_preprocessed/sub-tokyoSkyra07/anat/sub-tokyoSkyra07_space-other_T2w.json +++ b/derivatives/data_preprocessed/sub-tokyoSkyra07/anat/sub-tokyoSkyra07_space-other_T2w.json @@ -1,68 +1,81 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 123.251, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Skyra", - "InstitutionName": "The_University_of_Tokyo_Hospital", - "InstitutionalDepartmentName": "Tokyo", - "InstitutionAddress": "Street_Hongo_Bunkyou-ku_Tokyo_JP_113-8655", - "DeviceSerialNumber": "45896", - "StationName": "AWP45896", - "BodyPartExamined": "NCK", - "PatientPosition": "HFS", - "ProcedureStepDescription": "jcohenadad_2019-01-16", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "T2w", - "ProtocolName": "T2w", - "ScanningSequence": "SE", - "SequenceVariant": "SK_SP_OSP", - "ScanOptions": "PFP", - "SequenceName": "_spcR_100", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS3D", "DIS2D"], - "SeriesNumber": 4, - "AcquisitionTime": "17:59:14.527500", - "AcquisitionNumber": 1, - "SliceThickness": 0.8, - "SAR": 0.778759, - "EchoTime": 0.12, - "RepetitionTime": 1.5, - "FlipAngle": 120, - "PartialFourier": 1, - "BaseResolution": 320, - "ShimSetting": [ - 5718, - 5057, - 1284, - 1, - 174, - -120, - -20, - -59 ], - "TxRefAmp": 376.213, - "PhaseResolution": 1, - "PhaseOversampling": 0.8, - "ReceiveCoilName": "Spine_32", - "ReceiveCoilActiveElements": "HE3,4;NE1,2;SP1", - "CoilString": "HE3_4;NE1_2;SP1", - "PulseSequenceDetails": "%SiemensSeq%_tse_vfl", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 100, - "EchoTrainLength": 76, - "PhaseEncodingSteps": 422, - "AcquisitionMatrixPE": 320, - "ReconMatrixPE": 320, - "PixelBandwidth": 625, - "DwellTime": 2.5e-06, - "ImageOrientationPatientDICOM": [ - 1.11e-13, - 1, - 4.895e-12, - -0.0226874, - 4.897e-12, - -0.999743 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 123.251, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Skyra", + "InstitutionName": "The_University_of_Tokyo_Hospital", + "InstitutionalDepartmentName": "Tokyo", + "InstitutionAddress": "Street_Hongo_Bunkyou-ku_Tokyo_JP_113-8655", + "DeviceSerialNumber": "45896", + "StationName": "AWP45896", + "BodyPartExamined": "NCK", + "PatientPosition": "HFS", + "ProcedureStepDescription": "jcohenadad_2019-01-16", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "T2w", + "ProtocolName": "T2w", + "ScanningSequence": "SE", + "SequenceVariant": "SK_SP_OSP", + "ScanOptions": "PFP", + "SequenceName": "_spcR_100", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS3D", + "DIS2D" + ], + "SeriesNumber": 4, + "AcquisitionTime": "17:59:14.527500", + "AcquisitionNumber": 1, + "SliceThickness": 0.8, + "SAR": 0.778759, + "EchoTime": 0.12, + "RepetitionTime": 1.5, + "FlipAngle": 120, + "PartialFourier": 1, + "BaseResolution": 320, + "ShimSetting": [ + 5718, + 5057, + 1284, + 1, + 174, + -120, + -20, + -59 + ], + "TxRefAmp": 376.213, + "PhaseResolution": 1, + "PhaseOversampling": 0.8, + "ReceiveCoilName": "Spine_32", + "ReceiveCoilActiveElements": "HE3,4;NE1,2;SP1", + "CoilString": "HE3_4;NE1_2;SP1", + "PulseSequenceDetails": "%SiemensSeq%_tse_vfl", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "EchoTrainLength": 76, + "PhaseEncodingSteps": 422, + "AcquisitionMatrixPE": 320, + "ReconMatrixPE": 320, + "PixelBandwidth": 625, + "DwellTime": 2.5e-06, + "ImageOrientationPatientDICOM": [ + 1.11e-13, + 1, + 4.895e-12, + -0.0226874, + 4.897e-12, + -0.999743 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181125 Clang10.0.0", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-ubc01/anat/sub-ubc01_flip-1_mt-on_space-other_MTS.json b/derivatives/data_preprocessed/sub-ubc01/anat/sub-ubc01_flip-1_mt-on_space-other_MTS.json index 32c45189b2..42e0e3e025 100644 --- a/derivatives/data_preprocessed/sub-ubc01/anat/sub-ubc01_flip-1_mt-on_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-ubc01/anat/sub-ubc01_flip-1_mt-on_space-other_MTS.json @@ -1,60 +1,63 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Philips", - "ManufacturersModelName": "Ingenia_Elition_X", - "InstitutionName": "UBC_MRI_Research_Centre", - "InstitutionalDepartmentName": "CBH_MR", - "InstitutionAddress": "2215_Wesbrook_Mall", - "DeviceSerialNumber": "45052", - "StationName": "PHILIPS-1KQ0JBG", - "BodyPartExamined": "BRAIN", - "PatientPosition": "HFS", - "SoftwareVersions": "5.5.2_5.5.2.0", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-MT", - "ProtocolName": "WIP_GRE-MT", - "ScanningSequence": "GR", - "SequenceVariant": "SP", - "ScanOptions": "PFF", + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Philips", + "ManufacturersModelName": "Ingenia_Elition_X", + "InstitutionName": "UBC_MRI_Research_Centre", + "InstitutionalDepartmentName": "CBH_MR", + "InstitutionAddress": "2215_Wesbrook_Mall", + "DeviceSerialNumber": "45052", + "StationName": "PHILIPS-1KQ0JBG", + "BodyPartExamined": "BRAIN", + "PatientPosition": "HFS", + "SoftwareVersions": "5.5.2_5.5.2.0", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-MT", + "ProtocolName": "WIP_GRE-MT", + "ScanningSequence": "GR", + "SequenceVariant": "SP", + "ScanOptions": "PFF", "ImageType": [ - "ORIGINAL", - "PRIMARY", - "M", - "FFE", - "M", + "ORIGINAL", + "PRIMARY", + "M", + "FFE", + "M", "FFE" - ], - "SeriesNumber": 1501, - "AcquisitionTime": "14:53:25.770000", - "AcquisitionNumber": 15, - "PhilipsRWVSlope": 2.0779, - "PhilipsRWVIntercept": 0, - "PhilipsRescaleSlope": 2.0779, - "PhilipsRescaleIntercept": 0, - "PhilipsScaleSlope": 0.000611029, - "UsePhilipsFloatNotDisplayScaling": 1, - "SliceThickness": 5, - "SpacingBetweenSlices": 5, - "SAR": 2.88994, - "EchoTime": 0.002001, - "RepetitionTime": 0.057, - "FlipAngle": 9, - "PercentPhaseFOV": 100, - "PhaseEncodingSteps": 256, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 256, - "PixelBandwidth": 261, + ], + "SeriesNumber": 1501, + "AcquisitionTime": "14:53:25.770000", + "AcquisitionNumber": 15, + "PhilipsRWVSlope": 2.0779, + "PhilipsRWVIntercept": 0, + "PhilipsRescaleSlope": 2.0779, + "PhilipsRescaleIntercept": 0, + "PhilipsScaleSlope": 0.000611029, + "UsePhilipsFloatNotDisplayScaling": 1, + "SliceThickness": 5, + "SpacingBetweenSlices": 5, + "SAR": 2.88994, + "EchoTime": 0.002001, + "RepetitionTime": 0.057, + "FlipAngle": 9, + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 256, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "PixelBandwidth": 261, "ImageOrientationPatientDICOM": [ - 0.999948, - -0.00140982, - 0.0100565, - 0.000730074, - 0.997734, + 0.999948, + -0.00140982, + 0.0100565, + 0.000730074, + 0.997734, 0.0672788 - ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0", - "Dcm2bidsVersion": "2.1.4" + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0", + "Dcm2bidsVersion": "2.1.4", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-ubc01/anat/sub-ubc01_space-other_T1w.json b/derivatives/data_preprocessed/sub-ubc01/anat/sub-ubc01_space-other_T1w.json index c1976ca833..110260e428 100644 --- a/derivatives/data_preprocessed/sub-ubc01/anat/sub-ubc01_space-other_T1w.json +++ b/derivatives/data_preprocessed/sub-ubc01/anat/sub-ubc01_space-other_T1w.json @@ -1,61 +1,65 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Philips", - "ManufacturersModelName": "Ingenia_Elition_X", - "InstitutionName": "UBC_MRI_Research_Centre", - "InstitutionalDepartmentName": "CBH_MR", - "InstitutionAddress": "2215_Wesbrook_Mall", - "DeviceSerialNumber": "45052", - "StationName": "PHILIPS-1KQ0JBG", - "BodyPartExamined": "BRAIN", - "PatientPosition": "HFS", - "SoftwareVersions": "5.5.2_5.5.2.0", - "MRAcquisitionType": "3D", - "SeriesDescription": "T1w", - "ProtocolName": "WIP_T1w", - "ScanningSequence": "GR", - "SequenceVariant": "MP", - "ScanOptions": "OTHER", + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Philips", + "ManufacturersModelName": "Ingenia_Elition_X", + "InstitutionName": "UBC_MRI_Research_Centre", + "InstitutionalDepartmentName": "CBH_MR", + "InstitutionAddress": "2215_Wesbrook_Mall", + "DeviceSerialNumber": "45052", + "StationName": "PHILIPS-1KQ0JBG", + "BodyPartExamined": "BRAIN", + "PatientPosition": "HFS", + "SoftwareVersions": "5.5.2_5.5.2.0", + "MRAcquisitionType": "3D", + "SeriesDescription": "T1w", + "ProtocolName": "WIP_T1w", + "ScanningSequence": "GR", + "SequenceVariant": "MP", + "ScanOptions": "OTHER", "ImageType": [ - "ORIGINAL", - "PRIMARY", - "M", - "FFE", - "M", + "ORIGINAL", + "PRIMARY", + "M", + "FFE", + "M", "FFE" - ], - "SeriesNumber": 1201, - "AcquisitionTime": "14:33:9.660000", - "AcquisitionNumber": 12, - "PhilipsRWVSlope": 3.38193, - "PhilipsRWVIntercept": 0, - "PhilipsRescaleSlope": 3.38193, - "PhilipsRescaleIntercept": 0, - "PhilipsScaleSlope": 0.0038657, - "UsePhilipsFloatNotDisplayScaling": 1, - "SliceThickness": 1, - "SpacingBetweenSlices": 1, - "SAR": 0.513783, - "EchoTime": 0.003536, - "RepetitionTime": 0.0077453, - "FlipAngle": 9, - "PercentPhaseFOV": 81.25, - "EchoTrainLength": 246, - "PhaseEncodingSteps": 320, - "AcquisitionMatrixPE": 320, - "ReconMatrixPE": 320, - "PixelBandwidth": 191, + ], + "SeriesNumber": 1201, + "AcquisitionTime": "14:33:9.660000", + "AcquisitionNumber": 12, + "PhilipsRWVSlope": 3.38193, + "PhilipsRWVIntercept": 0, + "PhilipsRescaleSlope": 3.38193, + "PhilipsRescaleIntercept": 0, + "PhilipsScaleSlope": 0.0038657, + "UsePhilipsFloatNotDisplayScaling": 1, + "SliceThickness": 1, + "SpacingBetweenSlices": 1, + "SAR": 0.513783, + "EchoTime": 0.003536, + "RepetitionTime": 0.0077453, + "FlipAngle": 9, + "PercentPhaseFOV": 81.25, + "EchoTrainLength": 246, + "PhaseEncodingSteps": 320, + "AcquisitionMatrixPE": 320, + "ReconMatrixPE": 320, + "PixelBandwidth": 191, "ImageOrientationPatientDICOM": [ - 0, - 1, - 0, - 0.0209536, - 0, + 0, + 1, + 0, + 0.0209536, + 0, -0.99978 - ], - "InPlanePhaseEncodingDirectionDICOM": "ROW", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0", - "Dcm2bidsVersion": "2.1.4" + ], + "InPlanePhaseEncodingDirectionDICOM": "ROW", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0", + "Dcm2bidsVersion": "2.1.4", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-ubc01/anat/sub-ubc01_space-other_T2star.json b/derivatives/data_preprocessed/sub-ubc01/anat/sub-ubc01_space-other_T2star.json index 6f2f1a37b1..b211c8b8d7 100644 --- a/derivatives/data_preprocessed/sub-ubc01/anat/sub-ubc01_space-other_T2star.json +++ b/derivatives/data_preprocessed/sub-ubc01/anat/sub-ubc01_space-other_T2star.json @@ -59,5 +59,9 @@ "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0", "Dcm2bidsVersion": "2.1.4", - "AcquisitionDuration": 270.8 + "AcquisitionDuration": 270.8, + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-ubc01/anat/sub-ubc01_space-other_T2w.json b/derivatives/data_preprocessed/sub-ubc01/anat/sub-ubc01_space-other_T2w.json index c7bac4564a..cc508d3a0d 100644 --- a/derivatives/data_preprocessed/sub-ubc01/anat/sub-ubc01_space-other_T2w.json +++ b/derivatives/data_preprocessed/sub-ubc01/anat/sub-ubc01_space-other_T2w.json @@ -1,61 +1,65 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Philips", - "ManufacturersModelName": "Ingenia_Elition_X", - "InstitutionName": "UBC_MRI_Research_Centre", - "InstitutionalDepartmentName": "CBH_MR", - "InstitutionAddress": "2215_Wesbrook_Mall", - "DeviceSerialNumber": "45052", - "StationName": "PHILIPS-1KQ0JBG", - "BodyPartExamined": "BRAIN", - "PatientPosition": "HFS", - "SoftwareVersions": "5.5.2_5.5.2.0", - "MRAcquisitionType": "3D", - "SeriesDescription": "T2w", - "ProtocolName": "WIP_T2w", - "ScanningSequence": "SE", - "SequenceVariant": "SK", - "ScanOptions": "PFP", + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Philips", + "ManufacturersModelName": "Ingenia_Elition_X", + "InstitutionName": "UBC_MRI_Research_Centre", + "InstitutionalDepartmentName": "CBH_MR", + "InstitutionAddress": "2215_Wesbrook_Mall", + "DeviceSerialNumber": "45052", + "StationName": "PHILIPS-1KQ0JBG", + "BodyPartExamined": "BRAIN", + "PatientPosition": "HFS", + "SoftwareVersions": "5.5.2_5.5.2.0", + "MRAcquisitionType": "3D", + "SeriesDescription": "T2w", + "ProtocolName": "WIP_T2w", + "ScanningSequence": "SE", + "SequenceVariant": "SK", + "ScanOptions": "PFP", "ImageType": [ - "ORIGINAL", - "PRIMARY", - "M", - "SE", - "M", + "ORIGINAL", + "PRIMARY", + "M", + "SE", + "M", "SE" - ], - "SeriesNumber": 1301, - "AcquisitionTime": "14:37:43.730000", - "AcquisitionNumber": 13, - "PhilipsRWVSlope": 1.49206, - "PhilipsRWVIntercept": 0, - "PhilipsRescaleSlope": 1.49206, - "PhilipsRescaleIntercept": 0, - "PhilipsScaleSlope": 0.00111369, - "UsePhilipsFloatNotDisplayScaling": 1, - 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], - "InPlanePhaseEncodingDirectionDICOM": "ROW", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0", - "Dcm2bidsVersion": "2.1.4" + ], + "InPlanePhaseEncodingDirectionDICOM": "ROW", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0", + "Dcm2bidsVersion": "2.1.4", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-ubc02/anat/sub-ubc02_flip-1_mt-on_space-other_MTS.json b/derivatives/data_preprocessed/sub-ubc02/anat/sub-ubc02_flip-1_mt-on_space-other_MTS.json index 453047cdc1..318dbafff4 100644 --- a/derivatives/data_preprocessed/sub-ubc02/anat/sub-ubc02_flip-1_mt-on_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-ubc02/anat/sub-ubc02_flip-1_mt-on_space-other_MTS.json @@ -1,60 +1,63 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": 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b/derivatives/data_preprocessed/sub-ubc02/anat/sub-ubc02_space-other_T1w.json @@ -1,61 +1,65 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Philips", - "ManufacturersModelName": "Ingenia_Elition_X", - "InstitutionName": "UBC_MRI_Research_Centre", - "InstitutionalDepartmentName": "CBH_MR", - "InstitutionAddress": "2215_Wesbrook_Mall", - "DeviceSerialNumber": "45052", - "StationName": "PHILIPS-1KQ0JBG", - "BodyPartExamined": "BRAIN", - "PatientPosition": "HFS", - "SoftwareVersions": "5.5.2_5.5.2.0", - "MRAcquisitionType": "3D", - "SeriesDescription": "T1w", - "ProtocolName": "WIP_T1w", - "ScanningSequence": "GR", - "SequenceVariant": "MP", - "ScanOptions": "OTHER", + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Philips", + "ManufacturersModelName": "Ingenia_Elition_X", + "InstitutionName": "UBC_MRI_Research_Centre", + "InstitutionalDepartmentName": "CBH_MR", + "InstitutionAddress": "2215_Wesbrook_Mall", + "DeviceSerialNumber": "45052", + 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b/derivatives/data_preprocessed/sub-ubc03/anat/sub-ubc03_space-other_T1w.json @@ -1,61 +1,65 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Philips", - "ManufacturersModelName": "Ingenia_Elition_X", - "InstitutionName": "UBC_MRI_Research_Centre", - "InstitutionalDepartmentName": "CBH_MR", - "InstitutionAddress": "2215_Wesbrook_Mall", - "DeviceSerialNumber": "45052", - "StationName": "PHILIPS-1KQ0JBG", - "BodyPartExamined": "BRAIN", - "PatientPosition": "HFS", - "SoftwareVersions": "5.5.2_5.5.2.0", - "MRAcquisitionType": "3D", - "SeriesDescription": "T1w", - "ProtocolName": "WIP_T1w", - "ScanningSequence": "GR", - "SequenceVariant": "MP", - "ScanOptions": "OTHER", + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Philips", + "ManufacturersModelName": "Ingenia_Elition_X", + "InstitutionName": "UBC_MRI_Research_Centre", + "InstitutionalDepartmentName": "CBH_MR", + "InstitutionAddress": "2215_Wesbrook_Mall", + "DeviceSerialNumber": "45052", + "StationName": "PHILIPS-1KQ0JBG", + "BodyPartExamined": "BRAIN", + "PatientPosition": "HFS", + "SoftwareVersions": "5.5.2_5.5.2.0", + "MRAcquisitionType": "3D", + "SeriesDescription": "T1w", + "ProtocolName": "WIP_T1w", + "ScanningSequence": "GR", + "SequenceVariant": "MP", + "ScanOptions": "OTHER", "ImageType": [ - "ORIGINAL", - "PRIMARY", - "M", - "FFE", - "M", + "ORIGINAL", + "PRIMARY", + "M", + "FFE", + "M", "FFE" - ], - "SeriesNumber": 601, - "AcquisitionTime": "16:10:42.220000", - "AcquisitionNumber": 6, - "PhilipsRWVSlope": 4.11404, - "PhilipsRWVIntercept": 0, - "PhilipsRescaleSlope": 4.11404, - "PhilipsRescaleIntercept": 0, - "PhilipsScaleSlope": 0.00358594, - "UsePhilipsFloatNotDisplayScaling": 1, - "SliceThickness": 1, - "SpacingBetweenSlices": 1, - "SAR": 0.0568088, - "EchoTime": 0.003559, - "RepetitionTime": 0.0077884, - "FlipAngle": 9, - "PercentPhaseFOV": 81.25, - "EchoTrainLength": 246, - "PhaseEncodingSteps": 320, - "AcquisitionMatrixPE": 320, - "ReconMatrixPE": 320, - 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a/derivatives/data_preprocessed/sub-ubc03/anat/sub-ubc03_space-other_T2w.json b/derivatives/data_preprocessed/sub-ubc03/anat/sub-ubc03_space-other_T2w.json index 9751f2bd3c..86ae881712 100644 --- a/derivatives/data_preprocessed/sub-ubc03/anat/sub-ubc03_space-other_T2w.json +++ b/derivatives/data_preprocessed/sub-ubc03/anat/sub-ubc03_space-other_T2w.json @@ -1,61 +1,65 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Philips", - "ManufacturersModelName": "Ingenia_Elition_X", - "InstitutionName": "UBC_MRI_Research_Centre", - "InstitutionalDepartmentName": "CBH_MR", - "InstitutionAddress": "2215_Wesbrook_Mall", - "DeviceSerialNumber": "45052", - "StationName": "PHILIPS-1KQ0JBG", - "BodyPartExamined": "BRAIN", - "PatientPosition": "HFS", - "SoftwareVersions": "5.5.2_5.5.2.0", - "MRAcquisitionType": "3D", - "SeriesDescription": "T2w", - "ProtocolName": "WIP_T2w", - "ScanningSequence": "SE", - "SequenceVariant": "SK", - "ScanOptions": "PFP", + "Modality": "MR", + 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} } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-ubc04/anat/sub-ubc04_flip-2_mt-off_space-other_MTS.json b/derivatives/data_preprocessed/sub-ubc04/anat/sub-ubc04_flip-2_mt-off_space-other_MTS.json index 44936fa467..eaee72b6dc 100644 --- a/derivatives/data_preprocessed/sub-ubc04/anat/sub-ubc04_flip-2_mt-off_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-ubc04/anat/sub-ubc04_flip-2_mt-off_space-other_MTS.json @@ -1,60 +1,63 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Philips", - "ManufacturersModelName": "Ingenia_Elition_X", - "InstitutionName": "UBC_MRI_Research_Centre", - "InstitutionalDepartmentName": "CBH_MR", - "InstitutionAddress": "2215_Wesbrook_Mall", - "DeviceSerialNumber": "45052", - "StationName": "PHILIPS-1KQ0JBG", - "BodyPartExamined": "BRAIN", - "PatientPosition": "HFS", - "SoftwareVersions": "5.5.2_5.5.2.0", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-T1", - "ProtocolName": "WIP_GRE-T1", 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newline at end of file diff --git a/derivatives/data_preprocessed/sub-ubc05/anat/sub-ubc05_flip-2_mt-off_space-other_MTS.json b/derivatives/data_preprocessed/sub-ubc05/anat/sub-ubc05_flip-2_mt-off_space-other_MTS.json index 4e5ac2616b..8684be3ad7 100644 --- a/derivatives/data_preprocessed/sub-ubc05/anat/sub-ubc05_flip-2_mt-off_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-ubc05/anat/sub-ubc05_flip-2_mt-off_space-other_MTS.json @@ -1,60 +1,63 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Philips", - "ManufacturersModelName": "Ingenia_Elition_X", - "InstitutionName": "UBC_MRI_Research_Centre", - "InstitutionalDepartmentName": "CBH_MR", - "InstitutionAddress": "2215_Wesbrook_Mall", - "DeviceSerialNumber": "45052", - "StationName": "PHILIPS-1KQ0JBG", - "BodyPartExamined": "BRAIN", - "PatientPosition": "HFS", - "SoftwareVersions": "5.5.2_5.5.2.0", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-T1", - "ProtocolName": "WIP_GRE-T1", - 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b/derivatives/data_preprocessed/sub-ubc05/anat/sub-ubc05_space-other_T2w.json index fd08f0c1c8..c28bfae271 100644 --- a/derivatives/data_preprocessed/sub-ubc05/anat/sub-ubc05_space-other_T2w.json +++ b/derivatives/data_preprocessed/sub-ubc05/anat/sub-ubc05_space-other_T2w.json @@ -1,61 +1,65 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Philips", - "ManufacturersModelName": "Ingenia_Elition_X", - "InstitutionName": "UBC_MRI_Research_Centre", - "InstitutionalDepartmentName": "CBH_MR", - "InstitutionAddress": "2215_Wesbrook_Mall", - "DeviceSerialNumber": "45052", - "StationName": "PHILIPS-1KQ0JBG", - "BodyPartExamined": "BRAIN", - "PatientPosition": "HFS", - "SoftwareVersions": "5.5.2_5.5.2.0", - "MRAcquisitionType": "3D", - "SeriesDescription": "T2w", - "ProtocolName": "WIP_T2w", - "ScanningSequence": "SE", - "SequenceVariant": "SK", - "ScanOptions": "PFP", + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Philips", + 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newline at end of file diff --git a/derivatives/data_preprocessed/sub-ubc06/anat/sub-ubc06_flip-2_mt-off_space-other_MTS.json b/derivatives/data_preprocessed/sub-ubc06/anat/sub-ubc06_flip-2_mt-off_space-other_MTS.json index 8baf88b2bb..5f93776b69 100644 --- a/derivatives/data_preprocessed/sub-ubc06/anat/sub-ubc06_flip-2_mt-off_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-ubc06/anat/sub-ubc06_flip-2_mt-off_space-other_MTS.json @@ -1,60 +1,63 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Philips", - "ManufacturersModelName": "Ingenia_Elition_X", - "InstitutionName": "UBC_MRI_Research_Centre", - "InstitutionalDepartmentName": "CBH_MR", - "InstitutionAddress": "2215_Wesbrook_Mall", - "DeviceSerialNumber": "45052", - "StationName": "PHILIPS-1KQ0JBG", - "BodyPartExamined": "BRAIN", - "PatientPosition": "HFS", - "SoftwareVersions": "5.5.2_5.5.2.0", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-T1", - "ProtocolName": "WIP_GRE-T1", - 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b/derivatives/data_preprocessed/sub-ubc06/anat/sub-ubc06_space-other_T2w.json index 4243ad424c..2beb7a43e2 100644 --- a/derivatives/data_preprocessed/sub-ubc06/anat/sub-ubc06_space-other_T2w.json +++ b/derivatives/data_preprocessed/sub-ubc06/anat/sub-ubc06_space-other_T2w.json @@ -1,61 +1,65 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Philips", - "ManufacturersModelName": "Ingenia_Elition_X", - "InstitutionName": "UBC_MRI_Research_Centre", - "InstitutionalDepartmentName": "CBH_MR", - "InstitutionAddress": "2215_Wesbrook_Mall", - "DeviceSerialNumber": "45052", - "StationName": "PHILIPS-1KQ0JBG", - "BodyPartExamined": "BRAIN", - "PatientPosition": "HFS", - "SoftwareVersions": "5.5.2_5.5.2.0", - "MRAcquisitionType": "3D", - "SeriesDescription": "T2w", - "ProtocolName": "WIP_T2w", - "ScanningSequence": "SE", - "SequenceVariant": "SK", - "ScanOptions": "PFP", + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Philips", + "ManufacturersModelName": "Ingenia_Elition_X", + "InstitutionName": "UBC_MRI_Research_Centre", + "InstitutionalDepartmentName": "CBH_MR", + "InstitutionAddress": "2215_Wesbrook_Mall", + "DeviceSerialNumber": "45052", + "StationName": "PHILIPS-1KQ0JBG", + "BodyPartExamined": "BRAIN", + "PatientPosition": "HFS", + "SoftwareVersions": "5.5.2_5.5.2.0", + "MRAcquisitionType": "3D", + "SeriesDescription": "T2w", + "ProtocolName": "WIP_T2w", + "ScanningSequence": "SE", + "SequenceVariant": "SK", + "ScanOptions": "PFP", "ImageType": [ - "ORIGINAL", - "PRIMARY", - "M", - "SE", - "M", + "ORIGINAL", + "PRIMARY", + "M", + "SE", + "M", "SE" - ], - "SeriesNumber": 1301, - "AcquisitionTime": "12:42:59.550000", - "AcquisitionNumber": 13, - "PhilipsRWVSlope": 1.45226, - "PhilipsRWVIntercept": 0, - "PhilipsRescaleSlope": 1.45226, - "PhilipsRescaleIntercept": 0, - "PhilipsScaleSlope": 0.00126534, - "UsePhilipsFloatNotDisplayScaling": 1, - "SliceThickness": 0.8, - "SpacingBetweenSlices": 0.8, - "SAR": 1.59176, - "EchoTime": 0.12, - "RepetitionTime": 3.5, - "FlipAngle": 90, - "PercentPhaseFOV": 92.5, - "EchoTrainLength": 92, - "PhaseEncodingSteps": 318, - "AcquisitionMatrixPE": 318, - "ReconMatrixPE": 320, - "PixelBandwidth": 411, + ], + "SeriesNumber": 1301, + "AcquisitionTime": "12:42:59.550000", + "AcquisitionNumber": 13, + "PhilipsRWVSlope": 1.45226, + "PhilipsRWVIntercept": 0, + "PhilipsRescaleSlope": 1.45226, + "PhilipsRescaleIntercept": 0, + "PhilipsScaleSlope": 0.00126534, + "UsePhilipsFloatNotDisplayScaling": 1, + "SliceThickness": 0.8, + "SpacingBetweenSlices": 0.8, + "SAR": 1.59176, + "EchoTime": 0.12, + "RepetitionTime": 3.5, + "FlipAngle": 90, + "PercentPhaseFOV": 92.5, + "EchoTrainLength": 92, + "PhaseEncodingSteps": 318, + "AcquisitionMatrixPE": 318, + "ReconMatrixPE": 320, + "PixelBandwidth": 411, "ImageOrientationPatientDICOM": [ - 0, - 1, - 0, - -0.00937974, - 0, + 0, + 1, + 0, + -0.00937974, + 0, -0.999956 - ], - "InPlanePhaseEncodingDirectionDICOM": "ROW", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0", - "Dcm2bidsVersion": "2.1.4" + ], + "InPlanePhaseEncodingDirectionDICOM": "ROW", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0", + "Dcm2bidsVersion": "2.1.4", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-ucdavis01/anat/sub-ucdavis01_flip-1_mt-on_space-other_MTS.json b/derivatives/data_preprocessed/sub-ucdavis01/anat/sub-ucdavis01_flip-1_mt-on_space-other_MTS.json index 79c904df3d..c5e0f4d53e 100644 --- a/derivatives/data_preprocessed/sub-ucdavis01/anat/sub-ucdavis01_flip-1_mt-on_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-ucdavis01/anat/sub-ucdavis01_flip-1_mt-on_space-other_MTS.json @@ -48,5 +48,8 @@ "InPlanePhaseEncodingDirectionDICOM": "COL", "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20201224", - "Dcm2bidsVersion": "2.1.6" + "Dcm2bidsVersion": "2.1.6", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-ucdavis01/anat/sub-ucdavis01_flip-2_mt-off_space-other_MTS.json b/derivatives/data_preprocessed/sub-ucdavis01/anat/sub-ucdavis01_flip-2_mt-off_space-other_MTS.json index 200b103201..6a17e9ae8d 100644 --- a/derivatives/data_preprocessed/sub-ucdavis01/anat/sub-ucdavis01_flip-2_mt-off_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-ucdavis01/anat/sub-ucdavis01_flip-2_mt-off_space-other_MTS.json @@ -48,5 +48,8 @@ "InPlanePhaseEncodingDirectionDICOM": "COL", "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20201224", - "Dcm2bidsVersion": "2.1.6" + "Dcm2bidsVersion": "2.1.6", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-ucdavis01/anat/sub-ucdavis01_space-other_T1w.json b/derivatives/data_preprocessed/sub-ucdavis01/anat/sub-ucdavis01_space-other_T1w.json index f17c105963..5993b78ed0 100644 --- a/derivatives/data_preprocessed/sub-ucdavis01/anat/sub-ucdavis01_space-other_T1w.json +++ b/derivatives/data_preprocessed/sub-ucdavis01/anat/sub-ucdavis01_space-other_T1w.json @@ -49,5 +49,9 @@ "InPlanePhaseEncodingDirectionDICOM": "ROW", "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20201224", - "Dcm2bidsVersion": "2.1.6" + "Dcm2bidsVersion": "2.1.6", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-ucdavis01/anat/sub-ucdavis01_space-other_T2star.json b/derivatives/data_preprocessed/sub-ucdavis01/anat/sub-ucdavis01_space-other_T2star.json index dee943cb54..94c2920445 100644 --- a/derivatives/data_preprocessed/sub-ucdavis01/anat/sub-ucdavis01_space-other_T2star.json +++ b/derivatives/data_preprocessed/sub-ucdavis01/anat/sub-ucdavis01_space-other_T2star.json @@ -54,5 +54,9 @@ "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20201224", "Dcm2bidsVersion": "2.1.6", - "AcquisitionDuration": 285.0 + "AcquisitionDuration": 285.0, + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-ucdavis01/anat/sub-ucdavis01_space-other_T2w.json b/derivatives/data_preprocessed/sub-ucdavis01/anat/sub-ucdavis01_space-other_T2w.json index 77d081b71d..39ca56d6a6 100644 --- a/derivatives/data_preprocessed/sub-ucdavis01/anat/sub-ucdavis01_space-other_T2w.json +++ b/derivatives/data_preprocessed/sub-ucdavis01/anat/sub-ucdavis01_space-other_T2w.json @@ -51,5 +51,9 @@ "InPlanePhaseEncodingDirectionDICOM": "COL", "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20201224", - "Dcm2bidsVersion": "2.1.6" + "Dcm2bidsVersion": "2.1.6", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-ucdavis02/anat/sub-ucdavis02_flip-1_mt-on_space-other_MTS.json b/derivatives/data_preprocessed/sub-ucdavis02/anat/sub-ucdavis02_flip-1_mt-on_space-other_MTS.json index d100dc3527..3417dde314 100644 --- a/derivatives/data_preprocessed/sub-ucdavis02/anat/sub-ucdavis02_flip-1_mt-on_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-ucdavis02/anat/sub-ucdavis02_flip-1_mt-on_space-other_MTS.json @@ -48,5 +48,8 @@ "InPlanePhaseEncodingDirectionDICOM": "COL", "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20201224", - "Dcm2bidsVersion": "2.1.6" + "Dcm2bidsVersion": "2.1.6", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-ucdavis02/anat/sub-ucdavis02_flip-2_mt-off_space-other_MTS.json b/derivatives/data_preprocessed/sub-ucdavis02/anat/sub-ucdavis02_flip-2_mt-off_space-other_MTS.json index 1236fa8d64..554a00b4a3 100644 --- a/derivatives/data_preprocessed/sub-ucdavis02/anat/sub-ucdavis02_flip-2_mt-off_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-ucdavis02/anat/sub-ucdavis02_flip-2_mt-off_space-other_MTS.json @@ -48,5 +48,8 @@ "InPlanePhaseEncodingDirectionDICOM": "COL", "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20201224", - "Dcm2bidsVersion": "2.1.6" + "Dcm2bidsVersion": "2.1.6", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-ucdavis02/anat/sub-ucdavis02_space-other_T1w.json b/derivatives/data_preprocessed/sub-ucdavis02/anat/sub-ucdavis02_space-other_T1w.json index d07e126eb0..9e679874e5 100644 --- a/derivatives/data_preprocessed/sub-ucdavis02/anat/sub-ucdavis02_space-other_T1w.json +++ b/derivatives/data_preprocessed/sub-ucdavis02/anat/sub-ucdavis02_space-other_T1w.json @@ -49,5 +49,9 @@ "InPlanePhaseEncodingDirectionDICOM": "ROW", "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20201224", - "Dcm2bidsVersion": "2.1.6" + "Dcm2bidsVersion": "2.1.6", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-ucdavis02/anat/sub-ucdavis02_space-other_T2star.json b/derivatives/data_preprocessed/sub-ucdavis02/anat/sub-ucdavis02_space-other_T2star.json index 38f4631cfd..0eb4ecd2dc 100644 --- a/derivatives/data_preprocessed/sub-ucdavis02/anat/sub-ucdavis02_space-other_T2star.json +++ b/derivatives/data_preprocessed/sub-ucdavis02/anat/sub-ucdavis02_space-other_T2star.json @@ -54,5 +54,9 @@ "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20201224", "Dcm2bidsVersion": "2.1.6", - "AcquisitionDuration": 285.0 + "AcquisitionDuration": 285.0, + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-ucdavis02/anat/sub-ucdavis02_space-other_T2w.json b/derivatives/data_preprocessed/sub-ucdavis02/anat/sub-ucdavis02_space-other_T2w.json index 2e2dae8620..2b1b5a2431 100644 --- a/derivatives/data_preprocessed/sub-ucdavis02/anat/sub-ucdavis02_space-other_T2w.json +++ b/derivatives/data_preprocessed/sub-ucdavis02/anat/sub-ucdavis02_space-other_T2w.json @@ -51,5 +51,9 @@ "InPlanePhaseEncodingDirectionDICOM": "COL", "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20201224", - "Dcm2bidsVersion": "2.1.6" + "Dcm2bidsVersion": "2.1.6", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-ucdavis03/anat/sub-ucdavis03_flip-1_mt-on_space-other_MTS.json b/derivatives/data_preprocessed/sub-ucdavis03/anat/sub-ucdavis03_flip-1_mt-on_space-other_MTS.json index 72c242a076..035196a1c0 100644 --- a/derivatives/data_preprocessed/sub-ucdavis03/anat/sub-ucdavis03_flip-1_mt-on_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-ucdavis03/anat/sub-ucdavis03_flip-1_mt-on_space-other_MTS.json @@ -48,5 +48,8 @@ "InPlanePhaseEncodingDirectionDICOM": "COL", "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20201224", - "Dcm2bidsVersion": "2.1.6" + "Dcm2bidsVersion": "2.1.6", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-ucdavis03/anat/sub-ucdavis03_space-other_T1w.json b/derivatives/data_preprocessed/sub-ucdavis03/anat/sub-ucdavis03_space-other_T1w.json index 09f7c13b50..1fe7829b21 100644 --- a/derivatives/data_preprocessed/sub-ucdavis03/anat/sub-ucdavis03_space-other_T1w.json +++ b/derivatives/data_preprocessed/sub-ucdavis03/anat/sub-ucdavis03_space-other_T1w.json @@ -49,5 +49,9 @@ "InPlanePhaseEncodingDirectionDICOM": "ROW", "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20201224", - "Dcm2bidsVersion": "2.1.6" + "Dcm2bidsVersion": "2.1.6", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-ucdavis03/anat/sub-ucdavis03_space-other_T2star.json b/derivatives/data_preprocessed/sub-ucdavis03/anat/sub-ucdavis03_space-other_T2star.json index 643ef4c5fc..b9266d1ff2 100644 --- a/derivatives/data_preprocessed/sub-ucdavis03/anat/sub-ucdavis03_space-other_T2star.json +++ b/derivatives/data_preprocessed/sub-ucdavis03/anat/sub-ucdavis03_space-other_T2star.json @@ -54,5 +54,9 @@ "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20201224", "Dcm2bidsVersion": "2.1.6", - "AcquisitionDuration": 285.0 + "AcquisitionDuration": 285.0, + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-ucdavis03/anat/sub-ucdavis03_space-other_T2w.json b/derivatives/data_preprocessed/sub-ucdavis03/anat/sub-ucdavis03_space-other_T2w.json index 81c777191b..951cba9c56 100644 --- a/derivatives/data_preprocessed/sub-ucdavis03/anat/sub-ucdavis03_space-other_T2w.json +++ b/derivatives/data_preprocessed/sub-ucdavis03/anat/sub-ucdavis03_space-other_T2w.json @@ -51,5 +51,9 @@ "InPlanePhaseEncodingDirectionDICOM": "COL", "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20201224", - "Dcm2bidsVersion": "2.1.6" + "Dcm2bidsVersion": "2.1.6", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-ucdavis04/anat/sub-ucdavis04_flip-1_mt-on_space-other_MTS.json b/derivatives/data_preprocessed/sub-ucdavis04/anat/sub-ucdavis04_flip-1_mt-on_space-other_MTS.json index ac71f1693d..04d85ff272 100644 --- a/derivatives/data_preprocessed/sub-ucdavis04/anat/sub-ucdavis04_flip-1_mt-on_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-ucdavis04/anat/sub-ucdavis04_flip-1_mt-on_space-other_MTS.json @@ -48,5 +48,8 @@ "InPlanePhaseEncodingDirectionDICOM": "COL", "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20201224", - "Dcm2bidsVersion": "2.1.6" + "Dcm2bidsVersion": "2.1.6", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-ucdavis04/anat/sub-ucdavis04_flip-2_mt-off_space-other_MTS.json b/derivatives/data_preprocessed/sub-ucdavis04/anat/sub-ucdavis04_flip-2_mt-off_space-other_MTS.json index 7ed7195e84..be38bc55f1 100644 --- a/derivatives/data_preprocessed/sub-ucdavis04/anat/sub-ucdavis04_flip-2_mt-off_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-ucdavis04/anat/sub-ucdavis04_flip-2_mt-off_space-other_MTS.json @@ -48,5 +48,8 @@ "InPlanePhaseEncodingDirectionDICOM": "COL", "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20201224", - "Dcm2bidsVersion": "2.1.6" + "Dcm2bidsVersion": "2.1.6", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-ucdavis04/anat/sub-ucdavis04_space-other_T1w.json b/derivatives/data_preprocessed/sub-ucdavis04/anat/sub-ucdavis04_space-other_T1w.json index 52558720cc..88f2000498 100644 --- a/derivatives/data_preprocessed/sub-ucdavis04/anat/sub-ucdavis04_space-other_T1w.json +++ b/derivatives/data_preprocessed/sub-ucdavis04/anat/sub-ucdavis04_space-other_T1w.json @@ -49,5 +49,9 @@ "InPlanePhaseEncodingDirectionDICOM": "ROW", "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20201224", - "Dcm2bidsVersion": "2.1.6" + "Dcm2bidsVersion": "2.1.6", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-ucdavis04/anat/sub-ucdavis04_space-other_T2star.json b/derivatives/data_preprocessed/sub-ucdavis04/anat/sub-ucdavis04_space-other_T2star.json index 3f45a22a58..3f71846e5c 100644 --- a/derivatives/data_preprocessed/sub-ucdavis04/anat/sub-ucdavis04_space-other_T2star.json +++ b/derivatives/data_preprocessed/sub-ucdavis04/anat/sub-ucdavis04_space-other_T2star.json @@ -54,5 +54,9 @@ "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20201224", "Dcm2bidsVersion": "2.1.6", - "AcquisitionDuration": 285.0 + "AcquisitionDuration": 285.0, + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-ucdavis04/anat/sub-ucdavis04_space-other_T2w.json b/derivatives/data_preprocessed/sub-ucdavis04/anat/sub-ucdavis04_space-other_T2w.json index 6ccb48876f..8ce4179c79 100644 --- a/derivatives/data_preprocessed/sub-ucdavis04/anat/sub-ucdavis04_space-other_T2w.json +++ b/derivatives/data_preprocessed/sub-ucdavis04/anat/sub-ucdavis04_space-other_T2w.json @@ -51,5 +51,9 @@ "InPlanePhaseEncodingDirectionDICOM": "COL", "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20201224", - "Dcm2bidsVersion": "2.1.6" + "Dcm2bidsVersion": "2.1.6", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-ucdavis05/anat/sub-ucdavis05_flip-1_mt-on_space-other_MTS.json b/derivatives/data_preprocessed/sub-ucdavis05/anat/sub-ucdavis05_flip-1_mt-on_space-other_MTS.json index fb958992bd..8df29e5ecc 100644 --- a/derivatives/data_preprocessed/sub-ucdavis05/anat/sub-ucdavis05_flip-1_mt-on_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-ucdavis05/anat/sub-ucdavis05_flip-1_mt-on_space-other_MTS.json @@ -48,5 +48,8 @@ "InPlanePhaseEncodingDirectionDICOM": "COL", "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20201224", - "Dcm2bidsVersion": "2.1.6" + "Dcm2bidsVersion": "2.1.6", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-ucdavis05/anat/sub-ucdavis05_space-other_T1w.json b/derivatives/data_preprocessed/sub-ucdavis05/anat/sub-ucdavis05_space-other_T1w.json index 1398b41eb8..faae999e7c 100644 --- a/derivatives/data_preprocessed/sub-ucdavis05/anat/sub-ucdavis05_space-other_T1w.json +++ b/derivatives/data_preprocessed/sub-ucdavis05/anat/sub-ucdavis05_space-other_T1w.json @@ -49,5 +49,9 @@ "InPlanePhaseEncodingDirectionDICOM": "ROW", "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20201224", - "Dcm2bidsVersion": "2.1.6" + "Dcm2bidsVersion": "2.1.6", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-ucdavis05/anat/sub-ucdavis05_space-other_T2star.json b/derivatives/data_preprocessed/sub-ucdavis05/anat/sub-ucdavis05_space-other_T2star.json index 2357da013e..f18fe65ba9 100644 --- a/derivatives/data_preprocessed/sub-ucdavis05/anat/sub-ucdavis05_space-other_T2star.json +++ b/derivatives/data_preprocessed/sub-ucdavis05/anat/sub-ucdavis05_space-other_T2star.json @@ -54,5 +54,9 @@ "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20201224", "Dcm2bidsVersion": "2.1.6", - "AcquisitionDuration": 285.0 + "AcquisitionDuration": 285.0, + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-ucdavis05/anat/sub-ucdavis05_space-other_T2w.json b/derivatives/data_preprocessed/sub-ucdavis05/anat/sub-ucdavis05_space-other_T2w.json index 9efc4ab68c..6808af8113 100644 --- a/derivatives/data_preprocessed/sub-ucdavis05/anat/sub-ucdavis05_space-other_T2w.json +++ b/derivatives/data_preprocessed/sub-ucdavis05/anat/sub-ucdavis05_space-other_T2w.json @@ -51,5 +51,9 @@ "InPlanePhaseEncodingDirectionDICOM": "COL", "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20201224", - "Dcm2bidsVersion": "2.1.6" + "Dcm2bidsVersion": "2.1.6", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-ucdavis06/anat/sub-ucdavis06_flip-1_mt-on_space-other_MTS.json b/derivatives/data_preprocessed/sub-ucdavis06/anat/sub-ucdavis06_flip-1_mt-on_space-other_MTS.json index dc89382371..99b9ceb6a8 100644 --- a/derivatives/data_preprocessed/sub-ucdavis06/anat/sub-ucdavis06_flip-1_mt-on_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-ucdavis06/anat/sub-ucdavis06_flip-1_mt-on_space-other_MTS.json @@ -48,5 +48,8 @@ "InPlanePhaseEncodingDirectionDICOM": "COL", "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20201224", - "Dcm2bidsVersion": "2.1.6" + "Dcm2bidsVersion": "2.1.6", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-ucdavis06/anat/sub-ucdavis06_space-other_T1w.json b/derivatives/data_preprocessed/sub-ucdavis06/anat/sub-ucdavis06_space-other_T1w.json index efb48f7aa2..ba309049ba 100644 --- a/derivatives/data_preprocessed/sub-ucdavis06/anat/sub-ucdavis06_space-other_T1w.json +++ b/derivatives/data_preprocessed/sub-ucdavis06/anat/sub-ucdavis06_space-other_T1w.json @@ -49,5 +49,9 @@ "InPlanePhaseEncodingDirectionDICOM": "ROW", "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20201224", - "Dcm2bidsVersion": "2.1.6" + "Dcm2bidsVersion": "2.1.6", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-ucdavis06/anat/sub-ucdavis06_space-other_T2star.json b/derivatives/data_preprocessed/sub-ucdavis06/anat/sub-ucdavis06_space-other_T2star.json index dbf1b83fe9..41ee88a2bb 100644 --- a/derivatives/data_preprocessed/sub-ucdavis06/anat/sub-ucdavis06_space-other_T2star.json +++ b/derivatives/data_preprocessed/sub-ucdavis06/anat/sub-ucdavis06_space-other_T2star.json @@ -54,5 +54,9 @@ "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20201224", "Dcm2bidsVersion": "2.1.6", - "AcquisitionDuration": 285.0 + "AcquisitionDuration": 285.0, + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-ucdavis06/anat/sub-ucdavis06_space-other_T2w.json b/derivatives/data_preprocessed/sub-ucdavis06/anat/sub-ucdavis06_space-other_T2w.json index 5f40339640..2d6c64e9ff 100644 --- a/derivatives/data_preprocessed/sub-ucdavis06/anat/sub-ucdavis06_space-other_T2w.json +++ b/derivatives/data_preprocessed/sub-ucdavis06/anat/sub-ucdavis06_space-other_T2w.json @@ -51,5 +51,9 @@ "InPlanePhaseEncodingDirectionDICOM": "COL", "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20201224", - "Dcm2bidsVersion": "2.1.6" + "Dcm2bidsVersion": "2.1.6", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-ucdavis07/anat/sub-ucdavis07_flip-1_mt-on_space-other_MTS.json b/derivatives/data_preprocessed/sub-ucdavis07/anat/sub-ucdavis07_flip-1_mt-on_space-other_MTS.json index e01b41fbb1..30d9c6d7cd 100644 --- a/derivatives/data_preprocessed/sub-ucdavis07/anat/sub-ucdavis07_flip-1_mt-on_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-ucdavis07/anat/sub-ucdavis07_flip-1_mt-on_space-other_MTS.json @@ -56,5 +56,8 @@ "InPlanePhaseEncodingDirectionDICOM": "COL", "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20201224", - "Dcm2bidsVersion": "2.1.6" + "Dcm2bidsVersion": "2.1.6", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-ucdavis07/anat/sub-ucdavis07_space-other_T1w.json b/derivatives/data_preprocessed/sub-ucdavis07/anat/sub-ucdavis07_space-other_T1w.json index 62e3458d54..5bf51b761e 100644 --- a/derivatives/data_preprocessed/sub-ucdavis07/anat/sub-ucdavis07_space-other_T1w.json +++ b/derivatives/data_preprocessed/sub-ucdavis07/anat/sub-ucdavis07_space-other_T1w.json @@ -55,5 +55,9 @@ "InPlanePhaseEncodingDirectionDICOM": "ROW", "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20201224", - "Dcm2bidsVersion": "2.1.6" + "Dcm2bidsVersion": "2.1.6", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-ucdavis07/anat/sub-ucdavis07_space-other_T2star.json b/derivatives/data_preprocessed/sub-ucdavis07/anat/sub-ucdavis07_space-other_T2star.json index 6ebbd171db..424fd34b7b 100644 --- a/derivatives/data_preprocessed/sub-ucdavis07/anat/sub-ucdavis07_space-other_T2star.json +++ b/derivatives/data_preprocessed/sub-ucdavis07/anat/sub-ucdavis07_space-other_T2star.json @@ -79,5 +79,9 @@ "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20201224", "Dcm2bidsVersion": "2.1.6", - "AcquisitionDuration": 285.0 + "AcquisitionDuration": 285.0, + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-ucdavis07/anat/sub-ucdavis07_space-other_T2w.json b/derivatives/data_preprocessed/sub-ucdavis07/anat/sub-ucdavis07_space-other_T2w.json index 3e848ecc82..008838e329 100644 --- a/derivatives/data_preprocessed/sub-ucdavis07/anat/sub-ucdavis07_space-other_T2w.json +++ b/derivatives/data_preprocessed/sub-ucdavis07/anat/sub-ucdavis07_space-other_T2w.json @@ -60,5 +60,9 @@ "InPlanePhaseEncodingDirectionDICOM": "COL", "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20201224", - "Dcm2bidsVersion": "2.1.6" + "Dcm2bidsVersion": "2.1.6", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-ucl01/anat/sub-ucl01_flip-1_mt-on_space-other_MTS.json b/derivatives/data_preprocessed/sub-ucl01/anat/sub-ucl01_flip-1_mt-on_space-other_MTS.json index 3f0dc16fdb..75648d65fe 100644 --- a/derivatives/data_preprocessed/sub-ucl01/anat/sub-ucl01_flip-1_mt-on_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-ucl01/anat/sub-ucl01_flip-1_mt-on_space-other_MTS.json @@ -1,8 +1,11 @@ { - "FlipAngle": 9, - "EchoTime": 0.002, - "RepetitionTime": 0.057, - "PhaseEncodingDirection": "", - "ConversionSoftware": "dcm2nii", - "ConversionSoftwareVersion": "4AUGUST2014 64bit BSD License" -} + "FlipAngle": 9, + "EchoTime": 0.002, + "RepetitionTime": 0.057, + "PhaseEncodingDirection": "", + "ConversionSoftware": "dcm2nii", + "ConversionSoftwareVersion": "4AUGUST2014 64bit BSD License", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-ucl01/anat/sub-ucl01_flip-2_mt-off_space-other_MTS.json b/derivatives/data_preprocessed/sub-ucl01/anat/sub-ucl01_flip-2_mt-off_space-other_MTS.json index 9eff31c013..3c2eb6d6fb 100644 --- a/derivatives/data_preprocessed/sub-ucl01/anat/sub-ucl01_flip-2_mt-off_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-ucl01/anat/sub-ucl01_flip-2_mt-off_space-other_MTS.json @@ -1,8 +1,11 @@ { - "FlipAngle": 15, - "EchoTime": 0.002, - "RepetitionTime": 0.015, - "PhaseEncodingDirection": "i-,j-", - "ConversionSoftware": "dcm2nii", - "ConversionSoftwareVersion": "4AUGUST2014 64bit BSD License" -} + "FlipAngle": 15, + "EchoTime": 0.002, + "RepetitionTime": 0.015, + "PhaseEncodingDirection": "i-,j-", + "ConversionSoftware": "dcm2nii", + "ConversionSoftwareVersion": "4AUGUST2014 64bit BSD License", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-ucl01/anat/sub-ucl01_space-other_T1w.json b/derivatives/data_preprocessed/sub-ucl01/anat/sub-ucl01_space-other_T1w.json index c9d7c5eed8..3326ba76f6 100644 --- a/derivatives/data_preprocessed/sub-ucl01/anat/sub-ucl01_space-other_T1w.json +++ b/derivatives/data_preprocessed/sub-ucl01/anat/sub-ucl01_space-other_T1w.json @@ -1,8 +1,12 @@ { - "FlipAngle": 9, - "EchoTime": 0.0035, - "RepetitionTime": 0.0076, - "PhaseEncodingDirection": "i-,j-", - "ConversionSoftware": "dcm2nii", - "ConversionSoftwareVersion": "4AUGUST2014 64bit BSD License" -} + "FlipAngle": 9, + "EchoTime": 0.0035, + "RepetitionTime": 0.0076, + "PhaseEncodingDirection": "i-,j-", + "ConversionSoftware": "dcm2nii", + "ConversionSoftwareVersion": "4AUGUST2014 64bit BSD License", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-ucl01/anat/sub-ucl01_space-other_T2star.json b/derivatives/data_preprocessed/sub-ucl01/anat/sub-ucl01_space-other_T2star.json index 7b733b3590..cf30f6aaf5 100644 --- a/derivatives/data_preprocessed/sub-ucl01/anat/sub-ucl01_space-other_T2star.json +++ b/derivatives/data_preprocessed/sub-ucl01/anat/sub-ucl01_space-other_T2star.json @@ -5,5 +5,9 @@ "PhaseEncodingDirection": "i-,j-", "ConversionSoftware": "dcm2nii", "ConversionSoftwareVersion": "4AUGUST2014 64bit BSD License", - "AcquisitionDuration": 242.5 + "AcquisitionDuration": 242.5, + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-ucl01/anat/sub-ucl01_space-other_T2w.json b/derivatives/data_preprocessed/sub-ucl01/anat/sub-ucl01_space-other_T2w.json index 7604e0d65e..2f6e9a0b0c 100644 --- a/derivatives/data_preprocessed/sub-ucl01/anat/sub-ucl01_space-other_T2w.json +++ b/derivatives/data_preprocessed/sub-ucl01/anat/sub-ucl01_space-other_T2w.json @@ -1,8 +1,12 @@ { - "FlipAngle": 90, - "EchoTime": 0.120, - "RepetitionTime": 3.5, - "PhaseEncodingDirection": "i-,j-", - "ConversionSoftware": "dcm2nii", - "ConversionSoftwareVersion": "4AUGUST2014 64bit BSD License" -} + "FlipAngle": 90, + "EchoTime": 0.12, + "RepetitionTime": 3.5, + "PhaseEncodingDirection": "i-,j-", + "ConversionSoftware": "dcm2nii", + "ConversionSoftwareVersion": "4AUGUST2014 64bit BSD License", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-ucl02/anat/sub-ucl02_flip-1_mt-on_space-other_MTS.json b/derivatives/data_preprocessed/sub-ucl02/anat/sub-ucl02_flip-1_mt-on_space-other_MTS.json index 3f0dc16fdb..75648d65fe 100644 --- a/derivatives/data_preprocessed/sub-ucl02/anat/sub-ucl02_flip-1_mt-on_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-ucl02/anat/sub-ucl02_flip-1_mt-on_space-other_MTS.json @@ -1,8 +1,11 @@ { - "FlipAngle": 9, - "EchoTime": 0.002, - "RepetitionTime": 0.057, - "PhaseEncodingDirection": "", - "ConversionSoftware": "dcm2nii", - "ConversionSoftwareVersion": "4AUGUST2014 64bit BSD License" -} + "FlipAngle": 9, + "EchoTime": 0.002, + "RepetitionTime": 0.057, + "PhaseEncodingDirection": "", + "ConversionSoftware": "dcm2nii", + "ConversionSoftwareVersion": "4AUGUST2014 64bit BSD License", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-ucl02/anat/sub-ucl02_flip-2_mt-off_space-other_MTS.json b/derivatives/data_preprocessed/sub-ucl02/anat/sub-ucl02_flip-2_mt-off_space-other_MTS.json index 65bd864cfa..3c2eb6d6fb 100644 --- a/derivatives/data_preprocessed/sub-ucl02/anat/sub-ucl02_flip-2_mt-off_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-ucl02/anat/sub-ucl02_flip-2_mt-off_space-other_MTS.json @@ -1,8 +1,11 @@ { - "FlipAngle": 15, - "EchoTime": 0.002, - "RepetitionTime": 0.015, - "PhaseEncodingDirection": "i-,j-", - "ConversionSoftware": "dcm2nii", - "ConversionSoftwareVersion": "4AUGUST2014 64bit BSD License" -} + "FlipAngle": 15, + "EchoTime": 0.002, + "RepetitionTime": 0.015, + "PhaseEncodingDirection": "i-,j-", + "ConversionSoftware": "dcm2nii", + "ConversionSoftwareVersion": "4AUGUST2014 64bit BSD License", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-ucl02/anat/sub-ucl02_space-other_T1w.json b/derivatives/data_preprocessed/sub-ucl02/anat/sub-ucl02_space-other_T1w.json index 45f8666607..3326ba76f6 100644 --- a/derivatives/data_preprocessed/sub-ucl02/anat/sub-ucl02_space-other_T1w.json +++ b/derivatives/data_preprocessed/sub-ucl02/anat/sub-ucl02_space-other_T1w.json @@ -1,8 +1,12 @@ { - "FlipAngle": 9, - "EchoTime": 0.0035, - "RepetitionTime": 0.0076, - "PhaseEncodingDirection": "i-,j-", - "ConversionSoftware": "dcm2nii", - "ConversionSoftwareVersion": "4AUGUST2014 64bit BSD License" -} + "FlipAngle": 9, + "EchoTime": 0.0035, + "RepetitionTime": 0.0076, + "PhaseEncodingDirection": "i-,j-", + "ConversionSoftware": "dcm2nii", + "ConversionSoftwareVersion": "4AUGUST2014 64bit BSD License", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-ucl02/anat/sub-ucl02_space-other_T2star.json b/derivatives/data_preprocessed/sub-ucl02/anat/sub-ucl02_space-other_T2star.json index 7b733b3590..cf30f6aaf5 100644 --- a/derivatives/data_preprocessed/sub-ucl02/anat/sub-ucl02_space-other_T2star.json +++ b/derivatives/data_preprocessed/sub-ucl02/anat/sub-ucl02_space-other_T2star.json @@ -5,5 +5,9 @@ "PhaseEncodingDirection": "i-,j-", "ConversionSoftware": "dcm2nii", "ConversionSoftwareVersion": "4AUGUST2014 64bit BSD License", - "AcquisitionDuration": 242.5 + "AcquisitionDuration": 242.5, + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-ucl02/anat/sub-ucl02_space-other_T2w.json b/derivatives/data_preprocessed/sub-ucl02/anat/sub-ucl02_space-other_T2w.json index 67a9d279fa..2f6e9a0b0c 100644 --- a/derivatives/data_preprocessed/sub-ucl02/anat/sub-ucl02_space-other_T2w.json +++ b/derivatives/data_preprocessed/sub-ucl02/anat/sub-ucl02_space-other_T2w.json @@ -1,8 +1,12 @@ { - "FlipAngle": 90, - "EchoTime": 0.120, - "RepetitionTime": 3.5, - "PhaseEncodingDirection": "i-,j-", - "ConversionSoftware": "dcm2nii", - "ConversionSoftwareVersion": "4AUGUST2014 64bit BSD License" -} + "FlipAngle": 90, + "EchoTime": 0.12, + "RepetitionTime": 3.5, + "PhaseEncodingDirection": "i-,j-", + "ConversionSoftware": "dcm2nii", + "ConversionSoftwareVersion": "4AUGUST2014 64bit BSD License", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-ucl03/anat/sub-ucl03_flip-1_mt-on_space-other_MTS.json b/derivatives/data_preprocessed/sub-ucl03/anat/sub-ucl03_flip-1_mt-on_space-other_MTS.json index 837c5306c8..75648d65fe 100644 --- a/derivatives/data_preprocessed/sub-ucl03/anat/sub-ucl03_flip-1_mt-on_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-ucl03/anat/sub-ucl03_flip-1_mt-on_space-other_MTS.json @@ -1,8 +1,11 @@ { - "FlipAngle": 9, - "EchoTime": 0.002, - "RepetitionTime": 0.057, - "PhaseEncodingDirection": "", - "ConversionSoftware": "dcm2nii", - "ConversionSoftwareVersion": "4AUGUST2014 64bit BSD License" -} + "FlipAngle": 9, + "EchoTime": 0.002, + "RepetitionTime": 0.057, + "PhaseEncodingDirection": "", + "ConversionSoftware": "dcm2nii", + "ConversionSoftwareVersion": "4AUGUST2014 64bit BSD License", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-ucl03/anat/sub-ucl03_flip-2_mt-off_space-other_MTS.json b/derivatives/data_preprocessed/sub-ucl03/anat/sub-ucl03_flip-2_mt-off_space-other_MTS.json index 9eff31c013..3c2eb6d6fb 100644 --- a/derivatives/data_preprocessed/sub-ucl03/anat/sub-ucl03_flip-2_mt-off_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-ucl03/anat/sub-ucl03_flip-2_mt-off_space-other_MTS.json @@ -1,8 +1,11 @@ { - "FlipAngle": 15, - "EchoTime": 0.002, - "RepetitionTime": 0.015, - "PhaseEncodingDirection": "i-,j-", - "ConversionSoftware": "dcm2nii", - "ConversionSoftwareVersion": "4AUGUST2014 64bit BSD License" -} + "FlipAngle": 15, + "EchoTime": 0.002, + "RepetitionTime": 0.015, + "PhaseEncodingDirection": "i-,j-", + "ConversionSoftware": "dcm2nii", + "ConversionSoftwareVersion": "4AUGUST2014 64bit BSD License", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-ucl03/anat/sub-ucl03_space-other_T1w.json b/derivatives/data_preprocessed/sub-ucl03/anat/sub-ucl03_space-other_T1w.json index 12b5be15a4..3326ba76f6 100644 --- a/derivatives/data_preprocessed/sub-ucl03/anat/sub-ucl03_space-other_T1w.json +++ b/derivatives/data_preprocessed/sub-ucl03/anat/sub-ucl03_space-other_T1w.json @@ -1,8 +1,12 @@ { - "FlipAngle": 9, - "EchoTime": 0.0035, - "RepetitionTime": 0.0076, - "PhaseEncodingDirection": "i-,j-", - "ConversionSoftware": "dcm2nii", - "ConversionSoftwareVersion": "4AUGUST2014 64bit BSD License" -} + "FlipAngle": 9, + "EchoTime": 0.0035, + "RepetitionTime": 0.0076, + "PhaseEncodingDirection": "i-,j-", + "ConversionSoftware": "dcm2nii", + "ConversionSoftwareVersion": "4AUGUST2014 64bit BSD License", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-ucl03/anat/sub-ucl03_space-other_T2star.json b/derivatives/data_preprocessed/sub-ucl03/anat/sub-ucl03_space-other_T2star.json index 7b733b3590..cf30f6aaf5 100644 --- a/derivatives/data_preprocessed/sub-ucl03/anat/sub-ucl03_space-other_T2star.json +++ b/derivatives/data_preprocessed/sub-ucl03/anat/sub-ucl03_space-other_T2star.json @@ -5,5 +5,9 @@ "PhaseEncodingDirection": "i-,j-", "ConversionSoftware": "dcm2nii", "ConversionSoftwareVersion": "4AUGUST2014 64bit BSD License", - "AcquisitionDuration": 242.5 + "AcquisitionDuration": 242.5, + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-ucl03/anat/sub-ucl03_space-other_T2w.json b/derivatives/data_preprocessed/sub-ucl03/anat/sub-ucl03_space-other_T2w.json index 67a9d279fa..2f6e9a0b0c 100644 --- a/derivatives/data_preprocessed/sub-ucl03/anat/sub-ucl03_space-other_T2w.json +++ b/derivatives/data_preprocessed/sub-ucl03/anat/sub-ucl03_space-other_T2w.json @@ -1,8 +1,12 @@ { - "FlipAngle": 90, - "EchoTime": 0.120, - "RepetitionTime": 3.5, - "PhaseEncodingDirection": "i-,j-", - "ConversionSoftware": "dcm2nii", - "ConversionSoftwareVersion": "4AUGUST2014 64bit BSD License" -} + "FlipAngle": 90, + "EchoTime": 0.12, + "RepetitionTime": 3.5, + "PhaseEncodingDirection": "i-,j-", + "ConversionSoftware": "dcm2nii", + "ConversionSoftwareVersion": "4AUGUST2014 64bit BSD License", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-ucl04/anat/sub-ucl04_flip-1_mt-on_space-other_MTS.json b/derivatives/data_preprocessed/sub-ucl04/anat/sub-ucl04_flip-1_mt-on_space-other_MTS.json index db52d9b679..75648d65fe 100644 --- a/derivatives/data_preprocessed/sub-ucl04/anat/sub-ucl04_flip-1_mt-on_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-ucl04/anat/sub-ucl04_flip-1_mt-on_space-other_MTS.json @@ -1,8 +1,11 @@ { - "FlipAngle": 9, - "EchoTime": 0.002, - "RepetitionTime": 0.057, - "PhaseEncodingDirection": "", - "ConversionSoftware": "dcm2nii", - "ConversionSoftwareVersion": "4AUGUST2014 64bit BSD License" -} + "FlipAngle": 9, + "EchoTime": 0.002, + "RepetitionTime": 0.057, + "PhaseEncodingDirection": "", + "ConversionSoftware": "dcm2nii", + "ConversionSoftwareVersion": "4AUGUST2014 64bit BSD License", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-ucl04/anat/sub-ucl04_flip-2_mt-off_space-other_MTS.json b/derivatives/data_preprocessed/sub-ucl04/anat/sub-ucl04_flip-2_mt-off_space-other_MTS.json index 65bd864cfa..3c2eb6d6fb 100644 --- a/derivatives/data_preprocessed/sub-ucl04/anat/sub-ucl04_flip-2_mt-off_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-ucl04/anat/sub-ucl04_flip-2_mt-off_space-other_MTS.json @@ -1,8 +1,11 @@ { - "FlipAngle": 15, - "EchoTime": 0.002, - "RepetitionTime": 0.015, - "PhaseEncodingDirection": "i-,j-", - "ConversionSoftware": "dcm2nii", - "ConversionSoftwareVersion": "4AUGUST2014 64bit BSD License" -} + "FlipAngle": 15, + "EchoTime": 0.002, + "RepetitionTime": 0.015, + "PhaseEncodingDirection": "i-,j-", + "ConversionSoftware": "dcm2nii", + "ConversionSoftwareVersion": "4AUGUST2014 64bit BSD License", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-ucl04/anat/sub-ucl04_space-other_T1w.json b/derivatives/data_preprocessed/sub-ucl04/anat/sub-ucl04_space-other_T1w.json index 12b5be15a4..3326ba76f6 100644 --- a/derivatives/data_preprocessed/sub-ucl04/anat/sub-ucl04_space-other_T1w.json +++ b/derivatives/data_preprocessed/sub-ucl04/anat/sub-ucl04_space-other_T1w.json @@ -1,8 +1,12 @@ { - "FlipAngle": 9, - "EchoTime": 0.0035, - "RepetitionTime": 0.0076, - "PhaseEncodingDirection": "i-,j-", - "ConversionSoftware": "dcm2nii", - "ConversionSoftwareVersion": "4AUGUST2014 64bit BSD License" -} + "FlipAngle": 9, + "EchoTime": 0.0035, + "RepetitionTime": 0.0076, + "PhaseEncodingDirection": "i-,j-", + "ConversionSoftware": "dcm2nii", + "ConversionSoftwareVersion": "4AUGUST2014 64bit BSD License", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-ucl04/anat/sub-ucl04_space-other_T2star.json b/derivatives/data_preprocessed/sub-ucl04/anat/sub-ucl04_space-other_T2star.json index 7b733b3590..cf30f6aaf5 100644 --- a/derivatives/data_preprocessed/sub-ucl04/anat/sub-ucl04_space-other_T2star.json +++ b/derivatives/data_preprocessed/sub-ucl04/anat/sub-ucl04_space-other_T2star.json @@ -5,5 +5,9 @@ "PhaseEncodingDirection": "i-,j-", "ConversionSoftware": "dcm2nii", "ConversionSoftwareVersion": "4AUGUST2014 64bit BSD License", - "AcquisitionDuration": 242.5 + "AcquisitionDuration": 242.5, + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-ucl04/anat/sub-ucl04_space-other_T2w.json b/derivatives/data_preprocessed/sub-ucl04/anat/sub-ucl04_space-other_T2w.json index 67a9d279fa..2f6e9a0b0c 100644 --- a/derivatives/data_preprocessed/sub-ucl04/anat/sub-ucl04_space-other_T2w.json +++ b/derivatives/data_preprocessed/sub-ucl04/anat/sub-ucl04_space-other_T2w.json @@ -1,8 +1,12 @@ { - "FlipAngle": 90, - "EchoTime": 0.120, - "RepetitionTime": 3.5, - "PhaseEncodingDirection": "i-,j-", - "ConversionSoftware": "dcm2nii", - "ConversionSoftwareVersion": "4AUGUST2014 64bit BSD License" -} + "FlipAngle": 90, + "EchoTime": 0.12, + "RepetitionTime": 3.5, + "PhaseEncodingDirection": "i-,j-", + "ConversionSoftware": "dcm2nii", + "ConversionSoftwareVersion": "4AUGUST2014 64bit BSD License", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-ucl05/anat/sub-ucl05_flip-1_mt-on_space-other_MTS.json b/derivatives/data_preprocessed/sub-ucl05/anat/sub-ucl05_flip-1_mt-on_space-other_MTS.json index 3f0dc16fdb..75648d65fe 100644 --- a/derivatives/data_preprocessed/sub-ucl05/anat/sub-ucl05_flip-1_mt-on_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-ucl05/anat/sub-ucl05_flip-1_mt-on_space-other_MTS.json @@ -1,8 +1,11 @@ { - "FlipAngle": 9, - "EchoTime": 0.002, - "RepetitionTime": 0.057, - "PhaseEncodingDirection": "", - "ConversionSoftware": "dcm2nii", - "ConversionSoftwareVersion": "4AUGUST2014 64bit BSD License" -} + "FlipAngle": 9, + "EchoTime": 0.002, + "RepetitionTime": 0.057, + "PhaseEncodingDirection": "", + "ConversionSoftware": "dcm2nii", + "ConversionSoftwareVersion": "4AUGUST2014 64bit BSD License", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-ucl05/anat/sub-ucl05_flip-2_mt-off_space-other_MTS.json b/derivatives/data_preprocessed/sub-ucl05/anat/sub-ucl05_flip-2_mt-off_space-other_MTS.json index 8aaf3d96a1..3c2eb6d6fb 100644 --- a/derivatives/data_preprocessed/sub-ucl05/anat/sub-ucl05_flip-2_mt-off_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-ucl05/anat/sub-ucl05_flip-2_mt-off_space-other_MTS.json @@ -1,8 +1,11 @@ { - "FlipAngle": 15, - "EchoTime": 0.002, - "RepetitionTime": 0.015, - "PhaseEncodingDirection": "i-,j-", - "ConversionSoftware": "dcm2nii", - "ConversionSoftwareVersion": "4AUGUST2014 64bit BSD License" -} + "FlipAngle": 15, + "EchoTime": 0.002, + "RepetitionTime": 0.015, + "PhaseEncodingDirection": "i-,j-", + "ConversionSoftware": "dcm2nii", + "ConversionSoftwareVersion": "4AUGUST2014 64bit BSD License", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-ucl05/anat/sub-ucl05_space-other_T1w.json b/derivatives/data_preprocessed/sub-ucl05/anat/sub-ucl05_space-other_T1w.json index 45f8666607..3326ba76f6 100644 --- a/derivatives/data_preprocessed/sub-ucl05/anat/sub-ucl05_space-other_T1w.json +++ b/derivatives/data_preprocessed/sub-ucl05/anat/sub-ucl05_space-other_T1w.json @@ -1,8 +1,12 @@ { - "FlipAngle": 9, - "EchoTime": 0.0035, - "RepetitionTime": 0.0076, - "PhaseEncodingDirection": "i-,j-", - "ConversionSoftware": "dcm2nii", - "ConversionSoftwareVersion": "4AUGUST2014 64bit BSD License" -} + "FlipAngle": 9, + "EchoTime": 0.0035, + "RepetitionTime": 0.0076, + "PhaseEncodingDirection": "i-,j-", + "ConversionSoftware": "dcm2nii", + "ConversionSoftwareVersion": "4AUGUST2014 64bit BSD License", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-ucl05/anat/sub-ucl05_space-other_T2star.json b/derivatives/data_preprocessed/sub-ucl05/anat/sub-ucl05_space-other_T2star.json index 7b733b3590..cf30f6aaf5 100644 --- a/derivatives/data_preprocessed/sub-ucl05/anat/sub-ucl05_space-other_T2star.json +++ b/derivatives/data_preprocessed/sub-ucl05/anat/sub-ucl05_space-other_T2star.json @@ -5,5 +5,9 @@ "PhaseEncodingDirection": "i-,j-", "ConversionSoftware": "dcm2nii", "ConversionSoftwareVersion": "4AUGUST2014 64bit BSD License", - "AcquisitionDuration": 242.5 + "AcquisitionDuration": 242.5, + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-ucl05/anat/sub-ucl05_space-other_T2w.json b/derivatives/data_preprocessed/sub-ucl05/anat/sub-ucl05_space-other_T2w.json index 710cbffef0..2f6e9a0b0c 100644 --- a/derivatives/data_preprocessed/sub-ucl05/anat/sub-ucl05_space-other_T2w.json +++ b/derivatives/data_preprocessed/sub-ucl05/anat/sub-ucl05_space-other_T2w.json @@ -1,8 +1,12 @@ { - "FlipAngle": 90, - "EchoTime": 0.120, - "RepetitionTime": 3.5, - "PhaseEncodingDirection": "i-,j-", - "ConversionSoftware": "dcm2nii", - "ConversionSoftwareVersion": "4AUGUST2014 64bit BSD License" -} + "FlipAngle": 90, + "EchoTime": 0.12, + "RepetitionTime": 3.5, + "PhaseEncodingDirection": "i-,j-", + "ConversionSoftware": "dcm2nii", + "ConversionSoftwareVersion": "4AUGUST2014 64bit BSD License", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-ucl06/anat/sub-ucl06_flip-1_mt-on_space-other_MTS.json b/derivatives/data_preprocessed/sub-ucl06/anat/sub-ucl06_flip-1_mt-on_space-other_MTS.json index 087dcdf1c6..75648d65fe 100644 --- a/derivatives/data_preprocessed/sub-ucl06/anat/sub-ucl06_flip-1_mt-on_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-ucl06/anat/sub-ucl06_flip-1_mt-on_space-other_MTS.json @@ -1,8 +1,11 @@ { - "FlipAngle": 9, - "EchoTime": 0.002, - "RepetitionTime": 0.057, - "PhaseEncodingDirection": "", - "ConversionSoftware": "dcm2nii", - "ConversionSoftwareVersion": "4AUGUST2014 64bit BSD License" -} + "FlipAngle": 9, + "EchoTime": 0.002, + "RepetitionTime": 0.057, + "PhaseEncodingDirection": "", + "ConversionSoftware": "dcm2nii", + "ConversionSoftwareVersion": "4AUGUST2014 64bit BSD License", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-ucl06/anat/sub-ucl06_flip-2_mt-off_space-other_MTS.json b/derivatives/data_preprocessed/sub-ucl06/anat/sub-ucl06_flip-2_mt-off_space-other_MTS.json index 65bd864cfa..3c2eb6d6fb 100644 --- a/derivatives/data_preprocessed/sub-ucl06/anat/sub-ucl06_flip-2_mt-off_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-ucl06/anat/sub-ucl06_flip-2_mt-off_space-other_MTS.json @@ -1,8 +1,11 @@ { - "FlipAngle": 15, - "EchoTime": 0.002, - "RepetitionTime": 0.015, - "PhaseEncodingDirection": "i-,j-", - "ConversionSoftware": "dcm2nii", - "ConversionSoftwareVersion": "4AUGUST2014 64bit BSD License" -} + "FlipAngle": 15, + "EchoTime": 0.002, + "RepetitionTime": 0.015, + "PhaseEncodingDirection": "i-,j-", + "ConversionSoftware": "dcm2nii", + "ConversionSoftwareVersion": "4AUGUST2014 64bit BSD License", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-ucl06/anat/sub-ucl06_space-other_T1w.json b/derivatives/data_preprocessed/sub-ucl06/anat/sub-ucl06_space-other_T1w.json index 0277013069..3326ba76f6 100644 --- a/derivatives/data_preprocessed/sub-ucl06/anat/sub-ucl06_space-other_T1w.json +++ b/derivatives/data_preprocessed/sub-ucl06/anat/sub-ucl06_space-other_T1w.json @@ -1,8 +1,12 @@ { - "FlipAngle": 9, - "EchoTime": 0.0035, - "RepetitionTime": 0.0076, - "PhaseEncodingDirection": "i-,j-", - "ConversionSoftware": "dcm2nii", - "ConversionSoftwareVersion": "4AUGUST2014 64bit BSD License" -} + "FlipAngle": 9, + "EchoTime": 0.0035, + "RepetitionTime": 0.0076, + "PhaseEncodingDirection": "i-,j-", + "ConversionSoftware": "dcm2nii", + "ConversionSoftwareVersion": "4AUGUST2014 64bit BSD License", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-ucl06/anat/sub-ucl06_space-other_T2star.json b/derivatives/data_preprocessed/sub-ucl06/anat/sub-ucl06_space-other_T2star.json index 7b733b3590..cf30f6aaf5 100644 --- a/derivatives/data_preprocessed/sub-ucl06/anat/sub-ucl06_space-other_T2star.json +++ b/derivatives/data_preprocessed/sub-ucl06/anat/sub-ucl06_space-other_T2star.json @@ -5,5 +5,9 @@ "PhaseEncodingDirection": "i-,j-", "ConversionSoftware": "dcm2nii", "ConversionSoftwareVersion": "4AUGUST2014 64bit BSD License", - "AcquisitionDuration": 242.5 + "AcquisitionDuration": 242.5, + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-ucl06/anat/sub-ucl06_space-other_T2w.json b/derivatives/data_preprocessed/sub-ucl06/anat/sub-ucl06_space-other_T2w.json index 949f729290..2f6e9a0b0c 100644 --- a/derivatives/data_preprocessed/sub-ucl06/anat/sub-ucl06_space-other_T2w.json +++ b/derivatives/data_preprocessed/sub-ucl06/anat/sub-ucl06_space-other_T2w.json @@ -1,8 +1,12 @@ { - "FlipAngle": 90, - "EchoTime": 0.120, - "RepetitionTime": 3.5, - "PhaseEncodingDirection": "i-,j-", - "ConversionSoftware": "dcm2nii", - "ConversionSoftwareVersion": "4AUGUST2014 64bit BSD License" -} + "FlipAngle": 90, + "EchoTime": 0.12, + "RepetitionTime": 3.5, + "PhaseEncodingDirection": "i-,j-", + "ConversionSoftware": "dcm2nii", + "ConversionSoftwareVersion": "4AUGUST2014 64bit BSD License", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-unf01/anat/sub-unf01_flip-1_mt-on_space-other_MTS.json b/derivatives/data_preprocessed/sub-unf01/anat/sub-unf01_flip-1_mt-on_space-other_MTS.json index c9c8c3d1a0..5da03de80d 100644 --- a/derivatives/data_preprocessed/sub-unf01/anat/sub-unf01_flip-1_mt-on_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-unf01/anat/sub-unf01_flip-1_mt-on_space-other_MTS.json @@ -1,65 +1,75 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma_fit", - "InstitutionName": "IUGM", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "Chemin_Queen-Mary_4565_Montreal_District_CA_H3W_1W5", - "DeviceSerialNumber": "167006", - "StationName": "MRC35049", - "BodyPartExamined": "SPINE", - "PatientPosition": "HFS", - "ProcedureStepDescription": "spine_generic", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-MT1", - "ProtocolName": "GRE-MT1", - "ScanningSequence": "GR", - "SequenceVariant": "MTC_SP", - "ScanOptions": "MT", - "SequenceName": "_fl3d1", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "DIS2D"], - "SeriesNumber": 5, - "AcquisitionTime": "12:49:35.695000", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SAR": 0.515983, - "EchoTime": 0.00313, - "RepetitionTime": 0.035, - "FlipAngle": 9, - "PartialFourier": 1, - "BaseResolution": 256, - "ShimSetting": [ - 639, - -7425, - -9156, - -911, - -8, - 1253, - 787, - -127 ], - "TxRefAmp": 280.893, - "PhaseResolution": 1, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC5-7;NC1,2", - "PulseSequenceDetails": "%SiemensSeq%_gre", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 100, - "PhaseEncodingSteps": 255, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 256, - "ParallelReductionFactorInPlane": 2, - "PixelBandwidth": 260, - "DwellTime": 7.5e-06, - "ImageOrientationPatientDICOM": [ - 1, - -1.11898e-05, - 6.79104e-05, - 6.83363e-08, - 0.986856, - 0.161602 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma_fit", + "InstitutionName": "IUGM", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "Chemin_Queen-Mary_4565_Montreal_District_CA_H3W_1W5", + "DeviceSerialNumber": "167006", + "StationName": "MRC35049", + "BodyPartExamined": "SPINE", + "PatientPosition": "HFS", + "ProcedureStepDescription": "spine_generic", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-MT1", + "ProtocolName": "GRE-MT1", + "ScanningSequence": "GR", + "SequenceVariant": "MTC_SP", + "ScanOptions": "MT", + "SequenceName": "_fl3d1", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "DIS2D" + ], + "SeriesNumber": 5, + "AcquisitionTime": "12:49:35.695000", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SAR": 0.515983, + "EchoTime": 0.00313, + "RepetitionTime": 0.035, + "FlipAngle": 9, + "PartialFourier": 1, + "BaseResolution": 256, + "ShimSetting": [ + 639, + -7425, + -9156, + -911, + -8, + 1253, + 787, + -127 + ], + "TxRefAmp": 280.893, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC5-7;NC1,2", + "PulseSequenceDetails": "%SiemensSeq%_gre", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 255, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "ParallelReductionFactorInPlane": 2, + "PixelBandwidth": 260, + "DwellTime": 7.5e-06, + "ImageOrientationPatientDICOM": [ + 1, + -1.11898e-05, + 6.79104e-05, + 6.83363e-08, + 0.986856, + 0.161602 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-unf01/anat/sub-unf01_flip-2_mt-off_space-other_MTS.json b/derivatives/data_preprocessed/sub-unf01/anat/sub-unf01_flip-2_mt-off_space-other_MTS.json index b5d0c30aba..499959d693 100644 --- a/derivatives/data_preprocessed/sub-unf01/anat/sub-unf01_flip-2_mt-off_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-unf01/anat/sub-unf01_flip-2_mt-off_space-other_MTS.json @@ -1,64 +1,74 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma_fit", - "InstitutionName": "IUGM", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "Chemin_Queen-Mary_4565_Montreal_District_CA_H3W_1W5", - "DeviceSerialNumber": "167006", - "StationName": "MRC35049", - "BodyPartExamined": "SPINE", - "PatientPosition": "HFS", - "ProcedureStepDescription": "spine_generic", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-T1w", - "ProtocolName": "GRE-T1w", - "ScanningSequence": "GR", - "SequenceVariant": "SP", - "SequenceName": "_fl3d1", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "DIS2D"], - "SeriesNumber": 7, - "AcquisitionTime": "12:54:0.960000", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SAR": 0.0334547, - "EchoTime": 0.00313, - "RepetitionTime": 0.015, - "FlipAngle": 15, - "PartialFourier": 1, - "BaseResolution": 256, - "ShimSetting": [ - 639, - -7425, - -9156, - -911, - -8, - 1253, - 787, - -127 ], - "TxRefAmp": 280.893, - "PhaseResolution": 1, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC5-7;NC1,2", - "PulseSequenceDetails": "%SiemensSeq%_gre", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 100, - "PhaseEncodingSteps": 255, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 256, - "ParallelReductionFactorInPlane": 2, - "PixelBandwidth": 260, - "DwellTime": 7.5e-06, - "ImageOrientationPatientDICOM": [ - 1, - -1.11898e-05, - 6.79104e-05, - 6.83363e-08, - 0.986856, - 0.161602 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma_fit", + "InstitutionName": "IUGM", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "Chemin_Queen-Mary_4565_Montreal_District_CA_H3W_1W5", + "DeviceSerialNumber": "167006", + "StationName": "MRC35049", + "BodyPartExamined": "SPINE", + "PatientPosition": "HFS", + "ProcedureStepDescription": "spine_generic", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-T1w", + "ProtocolName": "GRE-T1w", + "ScanningSequence": "GR", + "SequenceVariant": "SP", + "SequenceName": "_fl3d1", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "DIS2D" + ], + "SeriesNumber": 7, + "AcquisitionTime": "12:54:0.960000", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SAR": 0.0334547, + "EchoTime": 0.00313, + "RepetitionTime": 0.015, + "FlipAngle": 15, + "PartialFourier": 1, + "BaseResolution": 256, + "ShimSetting": [ + 639, + -7425, + -9156, + -911, + -8, + 1253, + 787, + -127 + ], + "TxRefAmp": 280.893, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC5-7;NC1,2", + "PulseSequenceDetails": "%SiemensSeq%_gre", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 255, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "ParallelReductionFactorInPlane": 2, + "PixelBandwidth": 260, + "DwellTime": 7.5e-06, + "ImageOrientationPatientDICOM": [ + 1, + -1.11898e-05, + 6.79104e-05, + 6.83363e-08, + 0.986856, + 0.161602 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-unf01/anat/sub-unf01_space-other_T1w.json b/derivatives/data_preprocessed/sub-unf01/anat/sub-unf01_space-other_T1w.json index f153a402c3..f30e77b6de 100644 --- a/derivatives/data_preprocessed/sub-unf01/anat/sub-unf01_space-other_T1w.json +++ b/derivatives/data_preprocessed/sub-unf01/anat/sub-unf01_space-other_T1w.json @@ -1,64 +1,77 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma_fit", - "InstitutionName": "IUGM", - "InstitutionAddress": "Chemin_Queen-Mary_4565_Montreal_District_CA_H3W_1W5", - "DeviceSerialNumber": "167006", - "StationName": "MRC35049", - "BodyPartExamined": "SPINE", - "PatientPosition": "HFS", - "ProcedureStepDescription": "spine_generic", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "T1w", - "ProtocolName": "T1w", - "ScanningSequence": "GR_IR", - "SequenceVariant": "SK_SP_MP", - "ScanOptions": "IR", - "SequenceName": "_tfl3d1_16", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS3D", "DIS2D"], - "SeriesNumber": 2, - "AcquisitionTime": "12:33:7.032500", - "AcquisitionNumber": 1, - "SliceThickness": 1, - "SAR": 0.0601922, - "EchoTime": 0.00372, - "RepetitionTime": 2, - "InversionTime": 1, - "FlipAngle": 9, - "PartialFourier": 1, - "BaseResolution": 320, - "ShimSetting": [ - 620, - -7194, - -9127, - 77, - 28, - -20, - -10, - -23 ], - "TxRefAmp": 266.247, - "PhaseResolution": 1, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC1-7;NC1,2", - "PulseSequenceDetails": "%SiemensSeq%_tfl", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 81.25, - "PhaseEncodingSteps": 259, - "AcquisitionMatrixPE": 260, - "ReconMatrixPE": 320, - "ParallelReductionFactorInPlane": 2, - "PixelBandwidth": 150, - "ImageOrientationPatientDICOM": [ - 0, - 1, - 0, - -0.00523601, - 0, - -0.999986 ], - "InPlanePhaseEncodingDirectionDICOM": "ROW", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma_fit", + "InstitutionName": "IUGM", + "InstitutionAddress": "Chemin_Queen-Mary_4565_Montreal_District_CA_H3W_1W5", + "DeviceSerialNumber": "167006", + "StationName": "MRC35049", + "BodyPartExamined": "SPINE", + "PatientPosition": "HFS", + "ProcedureStepDescription": "spine_generic", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "T1w", + "ProtocolName": "T1w", + "ScanningSequence": "GR_IR", + "SequenceVariant": "SK_SP_MP", + "ScanOptions": "IR", + "SequenceName": "_tfl3d1_16", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS3D", + "DIS2D" + ], + "SeriesNumber": 2, + "AcquisitionTime": "12:33:7.032500", + "AcquisitionNumber": 1, + "SliceThickness": 1, + "SAR": 0.0601922, + "EchoTime": 0.00372, + "RepetitionTime": 2, + "InversionTime": 1, + "FlipAngle": 9, + "PartialFourier": 1, + "BaseResolution": 320, + "ShimSetting": [ + 620, + -7194, + -9127, + 77, + 28, + -20, + -10, + -23 + ], + "TxRefAmp": 266.247, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC1-7;NC1,2", + "PulseSequenceDetails": "%SiemensSeq%_tfl", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 81.25, + "PhaseEncodingSteps": 259, + "AcquisitionMatrixPE": 260, + "ReconMatrixPE": 320, + "ParallelReductionFactorInPlane": 2, + "PixelBandwidth": 150, + "ImageOrientationPatientDICOM": [ + 0, + 1, + 0, + -0.00523601, + 0, + -0.999986 + ], + "InPlanePhaseEncodingDirectionDICOM": "ROW", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-unf01/anat/sub-unf01_space-other_T2star.json b/derivatives/data_preprocessed/sub-unf01/anat/sub-unf01_space-other_T2star.json index f28d06c319..5e053abfa6 100644 --- a/derivatives/data_preprocessed/sub-unf01/anat/sub-unf01_space-other_T2star.json +++ b/derivatives/data_preprocessed/sub-unf01/anat/sub-unf01_space-other_T2star.json @@ -73,5 +73,9 @@ "InPlanePhaseEncodingDirectionDICOM": "COL", "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0", - "AcquisitionDuration": 285.0 + "AcquisitionDuration": 285.0, + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-unf01/anat/sub-unf01_space-other_T2w.json b/derivatives/data_preprocessed/sub-unf01/anat/sub-unf01_space-other_T2w.json index 5b41ea1890..3b35b34517 100644 --- a/derivatives/data_preprocessed/sub-unf01/anat/sub-unf01_space-other_T2w.json +++ b/derivatives/data_preprocessed/sub-unf01/anat/sub-unf01_space-other_T2w.json @@ -1,67 +1,80 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma_fit", - "InstitutionName": "IUGM", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "Chemin_Queen-Mary_4565_Montreal_District_CA_H3W_1W5", - "DeviceSerialNumber": "167006", - "StationName": "MRC35049", - "BodyPartExamined": "SPINE", - "PatientPosition": "HFS", - "ProcedureStepDescription": "spine_generic", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "T2w", - "ProtocolName": "T2w", - "ScanningSequence": "SE", - "SequenceVariant": "SK_SP_OSP", - "ScanOptions": "PFP", - "SequenceName": "_spcR_100", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS3D", "DIS2D"], - "SeriesNumber": 3, - "AcquisitionTime": "12:39:2.805000", - "AcquisitionNumber": 1, - "SliceThickness": 0.8, - "SAR": 0.533389, - "EchoTime": 0.12, - "RepetitionTime": 1.5, - "FlipAngle": 120, - "PartialFourier": 1, - "BaseResolution": 320, - "ShimSetting": [ - 620, - -7194, - -9127, - 77, - 28, - -20, - -10, - -23 ], - "TxRefAmp": 283.131, - "PhaseResolution": 1, - "PhaseOversampling": 0.8, - "ReceiveCoilName": "Spine_32", - "ReceiveCoilActiveElements": "HC5-7;NC1,2;SP1", - "PulseSequenceDetails": "%SiemensSeq%_tse_vfl", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 100, - "EchoTrainLength": 76, - "PhaseEncodingSteps": 422, - "AcquisitionMatrixPE": 320, - "ReconMatrixPE": 320, - "ParallelReductionFactorInPlane": 3, - "PixelBandwidth": 625, - "DwellTime": 2.5e-06, - "ImageOrientationPatientDICOM": [ - 0, - 1, - 4.897e-12, - 0, - 4.897e-12, - -1 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma_fit", + "InstitutionName": "IUGM", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "Chemin_Queen-Mary_4565_Montreal_District_CA_H3W_1W5", + "DeviceSerialNumber": "167006", + "StationName": "MRC35049", + "BodyPartExamined": "SPINE", + "PatientPosition": "HFS", + "ProcedureStepDescription": "spine_generic", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "T2w", + "ProtocolName": "T2w", + "ScanningSequence": "SE", + "SequenceVariant": "SK_SP_OSP", + "ScanOptions": "PFP", + "SequenceName": "_spcR_100", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS3D", + "DIS2D" + ], + "SeriesNumber": 3, + "AcquisitionTime": "12:39:2.805000", + "AcquisitionNumber": 1, + "SliceThickness": 0.8, + "SAR": 0.533389, + "EchoTime": 0.12, + "RepetitionTime": 1.5, + "FlipAngle": 120, + "PartialFourier": 1, + "BaseResolution": 320, + "ShimSetting": [ + 620, + -7194, + -9127, + 77, + 28, + -20, + -10, + -23 + ], + "TxRefAmp": 283.131, + "PhaseResolution": 1, + "PhaseOversampling": 0.8, + "ReceiveCoilName": "Spine_32", + "ReceiveCoilActiveElements": "HC5-7;NC1,2;SP1", + "PulseSequenceDetails": "%SiemensSeq%_tse_vfl", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "EchoTrainLength": 76, + "PhaseEncodingSteps": 422, + "AcquisitionMatrixPE": 320, + "ReconMatrixPE": 320, + "ParallelReductionFactorInPlane": 3, + "PixelBandwidth": 625, + "DwellTime": 2.5e-06, + "ImageOrientationPatientDICOM": [ + 0, + 1, + 4.897e-12, + 0, + 4.897e-12, + -1 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-unf02/anat/sub-unf02_flip-1_mt-on_space-other_MTS.json b/derivatives/data_preprocessed/sub-unf02/anat/sub-unf02_flip-1_mt-on_space-other_MTS.json index 07819e5505..53df2c154f 100644 --- a/derivatives/data_preprocessed/sub-unf02/anat/sub-unf02_flip-1_mt-on_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-unf02/anat/sub-unf02_flip-1_mt-on_space-other_MTS.json @@ -1,65 +1,75 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma_fit", - "InstitutionName": "IUGM", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "Chemin_Queen-Mary_4565_Montreal_District_CA_H3W_1W5", - "DeviceSerialNumber": "167006", - "StationName": "MRC35049", - "BodyPartExamined": "SPINE", - "PatientPosition": "HFS", - "ProcedureStepDescription": "spine_generic", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-MT1", - "ProtocolName": "GRE-MT1", - "ScanningSequence": "GR", - "SequenceVariant": "MTC_SP", - "ScanOptions": "MT", - "SequenceName": "_fl3d1", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "DIS2D"], - "SeriesNumber": 6, - "AcquisitionTime": "13:30:53.010000", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SAR": 0.765019, - "EchoTime": 0.00313, - "RepetitionTime": 0.036, - "FlipAngle": 9, - "PartialFourier": 1, - "BaseResolution": 256, - "ShimSetting": [ - 623, - -7241, - -9238, - -804, - -181, - 1200, - -890, - -95 ], - "TxRefAmp": 381.483, - "PhaseResolution": 1, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC5-7;NC1,2", - "PulseSequenceDetails": "%SiemensSeq%_gre", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 100, - "PhaseEncodingSteps": 255, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 256, - "ParallelReductionFactorInPlane": 2, - "PixelBandwidth": 260, - "DwellTime": 7.5e-06, - "ImageOrientationPatientDICOM": [ - 0.999509, - 0.00240386, - -0.0312258, - 1.96017e-08, - 0.99705, - 0.0767567 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma_fit", + "InstitutionName": "IUGM", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "Chemin_Queen-Mary_4565_Montreal_District_CA_H3W_1W5", + "DeviceSerialNumber": "167006", + "StationName": "MRC35049", + "BodyPartExamined": "SPINE", + "PatientPosition": "HFS", + "ProcedureStepDescription": "spine_generic", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-MT1", + "ProtocolName": "GRE-MT1", + "ScanningSequence": "GR", + "SequenceVariant": "MTC_SP", + "ScanOptions": "MT", + "SequenceName": "_fl3d1", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "DIS2D" + ], + "SeriesNumber": 6, + "AcquisitionTime": "13:30:53.010000", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SAR": 0.765019, + "EchoTime": 0.00313, + "RepetitionTime": 0.036, + "FlipAngle": 9, + "PartialFourier": 1, + "BaseResolution": 256, + "ShimSetting": [ + 623, + -7241, + -9238, + -804, + -181, + 1200, + -890, + -95 + ], + "TxRefAmp": 381.483, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC5-7;NC1,2", + "PulseSequenceDetails": "%SiemensSeq%_gre", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 255, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "ParallelReductionFactorInPlane": 2, + "PixelBandwidth": 260, + "DwellTime": 7.5e-06, + "ImageOrientationPatientDICOM": [ + 0.999509, + 0.00240386, + -0.0312258, + 1.96017e-08, + 0.99705, + 0.0767567 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-unf02/anat/sub-unf02_flip-2_mt-off_space-other_MTS.json b/derivatives/data_preprocessed/sub-unf02/anat/sub-unf02_flip-2_mt-off_space-other_MTS.json index 6f6bbf61ec..f9f162ca29 100644 --- a/derivatives/data_preprocessed/sub-unf02/anat/sub-unf02_flip-2_mt-off_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-unf02/anat/sub-unf02_flip-2_mt-off_space-other_MTS.json @@ -1,64 +1,74 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma_fit", - "InstitutionName": "IUGM", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "Chemin_Queen-Mary_4565_Montreal_District_CA_H3W_1W5", - "DeviceSerialNumber": "167006", - "StationName": "MRC35049", - "BodyPartExamined": "SPINE", - "PatientPosition": "HFS", - "ProcedureStepDescription": "spine_generic", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-T1w", - "ProtocolName": "GRE-T1w", - "ScanningSequence": "GR", - "SequenceVariant": "SP", - "SequenceName": "_fl3d1", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "DIS2D"], - "SeriesNumber": 8, - "AcquisitionTime": "13:35:25.987500", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SAR": 0.0510024, - "EchoTime": 0.00313, - "RepetitionTime": 0.015, - "FlipAngle": 15, - "PartialFourier": 1, - "BaseResolution": 256, - "ShimSetting": [ - 623, - -7241, - -9238, - -804, - -181, - 1200, - -890, - -95 ], - "TxRefAmp": 381.483, - "PhaseResolution": 1, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC5-7;NC1,2", - "PulseSequenceDetails": "%SiemensSeq%_gre", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 100, - "PhaseEncodingSteps": 255, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 256, - "ParallelReductionFactorInPlane": 2, - "PixelBandwidth": 260, - "DwellTime": 7.5e-06, - "ImageOrientationPatientDICOM": [ - 0.999509, - 0.00240386, - -0.0312258, - 1.96017e-08, - 0.99705, - 0.0767567 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma_fit", + "InstitutionName": "IUGM", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "Chemin_Queen-Mary_4565_Montreal_District_CA_H3W_1W5", + "DeviceSerialNumber": "167006", + "StationName": "MRC35049", + "BodyPartExamined": "SPINE", + "PatientPosition": "HFS", + "ProcedureStepDescription": "spine_generic", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-T1w", + "ProtocolName": "GRE-T1w", + "ScanningSequence": "GR", + "SequenceVariant": "SP", + "SequenceName": "_fl3d1", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "DIS2D" + ], + "SeriesNumber": 8, + "AcquisitionTime": "13:35:25.987500", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SAR": 0.0510024, + "EchoTime": 0.00313, + "RepetitionTime": 0.015, + "FlipAngle": 15, + "PartialFourier": 1, + "BaseResolution": 256, + "ShimSetting": [ + 623, + -7241, + -9238, + -804, + -181, + 1200, + -890, + -95 + ], + "TxRefAmp": 381.483, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC5-7;NC1,2", + "PulseSequenceDetails": "%SiemensSeq%_gre", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 255, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "ParallelReductionFactorInPlane": 2, + "PixelBandwidth": 260, + "DwellTime": 7.5e-06, + "ImageOrientationPatientDICOM": [ + 0.999509, + 0.00240386, + -0.0312258, + 1.96017e-08, + 0.99705, + 0.0767567 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-unf02/anat/sub-unf02_space-other_T1w.json b/derivatives/data_preprocessed/sub-unf02/anat/sub-unf02_space-other_T1w.json index a345ce986b..c366fb441b 100644 --- a/derivatives/data_preprocessed/sub-unf02/anat/sub-unf02_space-other_T1w.json +++ b/derivatives/data_preprocessed/sub-unf02/anat/sub-unf02_space-other_T1w.json @@ -1,66 +1,79 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma_fit", - "InstitutionName": "IUGM", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "Chemin_Queen-Mary_4565_Montreal_District_CA_H3W_1W5", - "DeviceSerialNumber": "167006", - "StationName": "MRC35049", - "BodyPartExamined": "SPINE", - "PatientPosition": "HFS", - "ProcedureStepDescription": "spine_generic", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "T1w", - "ProtocolName": "T1w", - "ScanningSequence": "GR_IR", - "SequenceVariant": "SK_SP_MP", - "ScanOptions": "IR", - "SequenceName": "_tfl3d1_16", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS3D", "DIS2D"], - "SeriesNumber": 2, - "AcquisitionTime": "13:13:46.245000", - "AcquisitionNumber": 1, - "SliceThickness": 1, - "SAR": 0.0920307, - "EchoTime": 0.00372, - "RepetitionTime": 2, - "InversionTime": 1, - "FlipAngle": 9, - "PartialFourier": 1, - "BaseResolution": 320, - "ShimSetting": [ - 620, - -7194, - -9127, - 77, - 28, - -20, - -10, - -23 ], - "TxRefAmp": 353.214, - "PhaseResolution": 1, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC1-7;NC1,2", - "PulseSequenceDetails": "%SiemensSeq%_tfl", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 81.25, - "PhaseEncodingSteps": 259, - "AcquisitionMatrixPE": 260, - "ReconMatrixPE": 320, - "ParallelReductionFactorInPlane": 2, - "PixelBandwidth": 150, - "DwellTime": 1.04e-05, - "ImageOrientationPatientDICOM": [ - 0, - 1, - 0, - -0.0401318, - 0, - -0.999194 ], - "InPlanePhaseEncodingDirectionDICOM": "ROW", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma_fit", + "InstitutionName": "IUGM", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "Chemin_Queen-Mary_4565_Montreal_District_CA_H3W_1W5", + "DeviceSerialNumber": "167006", + "StationName": "MRC35049", + "BodyPartExamined": "SPINE", + "PatientPosition": "HFS", + "ProcedureStepDescription": "spine_generic", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "T1w", + "ProtocolName": "T1w", + "ScanningSequence": "GR_IR", + "SequenceVariant": "SK_SP_MP", + "ScanOptions": "IR", + "SequenceName": "_tfl3d1_16", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS3D", + "DIS2D" + ], + "SeriesNumber": 2, + "AcquisitionTime": "13:13:46.245000", + "AcquisitionNumber": 1, + "SliceThickness": 1, + "SAR": 0.0920307, + "EchoTime": 0.00372, + "RepetitionTime": 2, + "InversionTime": 1, + "FlipAngle": 9, + "PartialFourier": 1, + "BaseResolution": 320, + "ShimSetting": [ + 620, + -7194, + -9127, + 77, + 28, + -20, + -10, + -23 + ], + "TxRefAmp": 353.214, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC1-7;NC1,2", + "PulseSequenceDetails": "%SiemensSeq%_tfl", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 81.25, + "PhaseEncodingSteps": 259, + "AcquisitionMatrixPE": 260, + "ReconMatrixPE": 320, + "ParallelReductionFactorInPlane": 2, + "PixelBandwidth": 150, + "DwellTime": 1.04e-05, + "ImageOrientationPatientDICOM": [ + 0, + 1, + 0, + -0.0401318, + 0, + -0.999194 + ], + "InPlanePhaseEncodingDirectionDICOM": "ROW", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-unf02/anat/sub-unf02_space-other_T2star.json b/derivatives/data_preprocessed/sub-unf02/anat/sub-unf02_space-other_T2star.json index 58cdcdcd4c..673c640785 100644 --- a/derivatives/data_preprocessed/sub-unf02/anat/sub-unf02_space-other_T2star.json +++ b/derivatives/data_preprocessed/sub-unf02/anat/sub-unf02_space-other_T2star.json @@ -73,5 +73,9 @@ "InPlanePhaseEncodingDirectionDICOM": "COL", "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0", - "AcquisitionDuration": 285.0 + "AcquisitionDuration": 285.0, + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-unf02/anat/sub-unf02_space-other_T2w.json b/derivatives/data_preprocessed/sub-unf02/anat/sub-unf02_space-other_T2w.json index a0997b159d..4a12c02709 100644 --- a/derivatives/data_preprocessed/sub-unf02/anat/sub-unf02_space-other_T2w.json +++ b/derivatives/data_preprocessed/sub-unf02/anat/sub-unf02_space-other_T2w.json @@ -1,67 +1,80 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma_fit", - "InstitutionName": "IUGM", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "Chemin_Queen-Mary_4565_Montreal_District_CA_H3W_1W5", - "DeviceSerialNumber": "167006", - "StationName": "MRC35049", - "BodyPartExamined": "SPINE", - "PatientPosition": "HFS", - "ProcedureStepDescription": "spine_generic", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "T2w", - "ProtocolName": "T2w", - "ScanningSequence": "SE", - "SequenceVariant": "SK_SP_OSP", - "ScanOptions": "PFP", - "SequenceName": "_spcR_100", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS3D", "DIS2D"], - "SeriesNumber": 3, - "AcquisitionTime": "13:19:4.995000", - "AcquisitionNumber": 1, - "SliceThickness": 0.8, - "SAR": 0.783638, - "EchoTime": 0.12, - "RepetitionTime": 1.5, - "FlipAngle": 120, - "PartialFourier": 1, - "BaseResolution": 320, - "ShimSetting": [ - 620, - -7194, - -9127, - 77, - 28, - -20, - -10, - -23 ], - "TxRefAmp": 393.825, - "PhaseResolution": 1, - "PhaseOversampling": 0.8, - "ReceiveCoilName": "Spine_32", - "ReceiveCoilActiveElements": "HC5-7;NC1,2;SP1", - "PulseSequenceDetails": "%SiemensSeq%_tse_vfl", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 100, - "EchoTrainLength": 76, - "PhaseEncodingSteps": 422, - "AcquisitionMatrixPE": 320, - "ReconMatrixPE": 320, - "ParallelReductionFactorInPlane": 3, - "PixelBandwidth": 625, - "DwellTime": 2.5e-06, - "ImageOrientationPatientDICOM": [ - 0, - 1, - 4.897e-12, - 0, - 4.897e-12, - -1 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma_fit", + "InstitutionName": "IUGM", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "Chemin_Queen-Mary_4565_Montreal_District_CA_H3W_1W5", + "DeviceSerialNumber": "167006", + "StationName": "MRC35049", + "BodyPartExamined": "SPINE", + "PatientPosition": "HFS", + "ProcedureStepDescription": "spine_generic", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "T2w", + "ProtocolName": "T2w", + "ScanningSequence": "SE", + "SequenceVariant": "SK_SP_OSP", + "ScanOptions": "PFP", + "SequenceName": "_spcR_100", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS3D", + "DIS2D" + ], + "SeriesNumber": 3, + "AcquisitionTime": "13:19:4.995000", + "AcquisitionNumber": 1, + "SliceThickness": 0.8, + "SAR": 0.783638, + "EchoTime": 0.12, + "RepetitionTime": 1.5, + "FlipAngle": 120, + "PartialFourier": 1, + "BaseResolution": 320, + "ShimSetting": [ + 620, + -7194, + -9127, + 77, + 28, + -20, + -10, + -23 + ], + "TxRefAmp": 393.825, + "PhaseResolution": 1, + "PhaseOversampling": 0.8, + "ReceiveCoilName": "Spine_32", + "ReceiveCoilActiveElements": "HC5-7;NC1,2;SP1", + "PulseSequenceDetails": "%SiemensSeq%_tse_vfl", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "EchoTrainLength": 76, + "PhaseEncodingSteps": 422, + "AcquisitionMatrixPE": 320, + "ReconMatrixPE": 320, + "ParallelReductionFactorInPlane": 3, + "PixelBandwidth": 625, + "DwellTime": 2.5e-06, + "ImageOrientationPatientDICOM": [ + 0, + 1, + 4.897e-12, + 0, + 4.897e-12, + -1 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-unf03/anat/sub-unf03_flip-1_mt-on_space-other_MTS.json b/derivatives/data_preprocessed/sub-unf03/anat/sub-unf03_flip-1_mt-on_space-other_MTS.json index 52e7056f6a..245af508aa 100644 --- a/derivatives/data_preprocessed/sub-unf03/anat/sub-unf03_flip-1_mt-on_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-unf03/anat/sub-unf03_flip-1_mt-on_space-other_MTS.json @@ -1,65 +1,75 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma_fit", - "InstitutionName": "IUGM", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "Chemin_Queen-Mary_4565_Montreal_District_CA_H3W_1W5", - "DeviceSerialNumber": "167006", - "StationName": "MRC35049", - "BodyPartExamined": "SPINE", - "PatientPosition": "HFS", - "ProcedureStepDescription": "spine_generic", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-MT1", - "ProtocolName": "GRE-MT1", - "ScanningSequence": "GR", - "SequenceVariant": "MTC_SP", - "ScanOptions": "MT", - "SequenceName": "_fl3d1", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "DIS2D"], - "SeriesNumber": 5, - "AcquisitionTime": "14:11:32.030000", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SAR": 0.576182, - "EchoTime": 0.00313, - "RepetitionTime": 0.035, - "FlipAngle": 9, - "PartialFourier": 1, - "BaseResolution": 256, - "ShimSetting": [ - 683, - -7475, - -9161, - -173, - 50, - 1376, - 1385, - -48 ], - "TxRefAmp": 271.267, - "PhaseResolution": 1, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC5-7;NC1,2", - "PulseSequenceDetails": "%SiemensSeq%_gre", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 100, - "PhaseEncodingSteps": 255, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 256, - "ParallelReductionFactorInPlane": 2, - "PixelBandwidth": 260, - "DwellTime": 7.5e-06, - "ImageOrientationPatientDICOM": [ - 0.999756, - 0.00511585, - -0.0214686, - 2.94852e-09, - 0.972762, - 0.231804 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma_fit", + "InstitutionName": "IUGM", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "Chemin_Queen-Mary_4565_Montreal_District_CA_H3W_1W5", + "DeviceSerialNumber": "167006", + "StationName": "MRC35049", + "BodyPartExamined": "SPINE", + "PatientPosition": "HFS", + "ProcedureStepDescription": "spine_generic", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-MT1", + "ProtocolName": "GRE-MT1", + "ScanningSequence": "GR", + "SequenceVariant": "MTC_SP", + "ScanOptions": "MT", + "SequenceName": "_fl3d1", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "DIS2D" + ], + "SeriesNumber": 5, + "AcquisitionTime": "14:11:32.030000", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SAR": 0.576182, + "EchoTime": 0.00313, + "RepetitionTime": 0.035, + "FlipAngle": 9, + "PartialFourier": 1, + "BaseResolution": 256, + "ShimSetting": [ + 683, + -7475, + -9161, + -173, + 50, + 1376, + 1385, + -48 + ], + "TxRefAmp": 271.267, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC5-7;NC1,2", + "PulseSequenceDetails": "%SiemensSeq%_gre", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 255, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "ParallelReductionFactorInPlane": 2, + "PixelBandwidth": 260, + "DwellTime": 7.5e-06, + "ImageOrientationPatientDICOM": [ + 0.999756, + 0.00511585, + -0.0214686, + 2.94852e-09, + 0.972762, + 0.231804 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-unf03/anat/sub-unf03_flip-2_mt-off_space-other_MTS.json b/derivatives/data_preprocessed/sub-unf03/anat/sub-unf03_flip-2_mt-off_space-other_MTS.json index f2f01f8d1d..dc27622f6d 100644 --- a/derivatives/data_preprocessed/sub-unf03/anat/sub-unf03_flip-2_mt-off_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-unf03/anat/sub-unf03_flip-2_mt-off_space-other_MTS.json @@ -1,64 +1,74 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma_fit", - "InstitutionName": "IUGM", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "Chemin_Queen-Mary_4565_Montreal_District_CA_H3W_1W5", - "DeviceSerialNumber": "167006", - "StationName": "MRC35049", - "BodyPartExamined": "SPINE", - "PatientPosition": "HFS", - "ProcedureStepDescription": "spine_generic", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-T1w", - "ProtocolName": "GRE-T1w", - "ScanningSequence": "GR", - "SequenceVariant": "SP", - "SequenceName": "_fl3d1", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "DIS2D"], - "SeriesNumber": 7, - "AcquisitionTime": "14:15:56.957500", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SAR": 0.0373579, - "EchoTime": 0.00313, - "RepetitionTime": 0.015, - "FlipAngle": 15, - "PartialFourier": 1, - "BaseResolution": 256, - "ShimSetting": [ - 683, - -7475, - -9161, - -173, - 50, - 1376, - 1385, - -48 ], - "TxRefAmp": 271.267, - "PhaseResolution": 1, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC5-7;NC1,2", - "PulseSequenceDetails": "%SiemensSeq%_gre", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 100, - "PhaseEncodingSteps": 255, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 256, - "ParallelReductionFactorInPlane": 2, - "PixelBandwidth": 260, - "DwellTime": 7.5e-06, - "ImageOrientationPatientDICOM": [ - 0.999756, - 0.00511585, - -0.0214686, - 2.94852e-09, - 0.972762, - 0.231804 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma_fit", + "InstitutionName": "IUGM", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "Chemin_Queen-Mary_4565_Montreal_District_CA_H3W_1W5", + "DeviceSerialNumber": "167006", + "StationName": "MRC35049", + "BodyPartExamined": "SPINE", + "PatientPosition": "HFS", + "ProcedureStepDescription": "spine_generic", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-T1w", + "ProtocolName": "GRE-T1w", + "ScanningSequence": "GR", + "SequenceVariant": "SP", + "SequenceName": "_fl3d1", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "DIS2D" + ], + "SeriesNumber": 7, + "AcquisitionTime": "14:15:56.957500", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SAR": 0.0373579, + "EchoTime": 0.00313, + "RepetitionTime": 0.015, + "FlipAngle": 15, + "PartialFourier": 1, + "BaseResolution": 256, + "ShimSetting": [ + 683, + -7475, + -9161, + -173, + 50, + 1376, + 1385, + -48 + ], + "TxRefAmp": 271.267, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC5-7;NC1,2", + "PulseSequenceDetails": "%SiemensSeq%_gre", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 255, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "ParallelReductionFactorInPlane": 2, + "PixelBandwidth": 260, + "DwellTime": 7.5e-06, + "ImageOrientationPatientDICOM": [ + 0.999756, + 0.00511585, + -0.0214686, + 2.94852e-09, + 0.972762, + 0.231804 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-unf03/anat/sub-unf03_space-other_T1w.json b/derivatives/data_preprocessed/sub-unf03/anat/sub-unf03_space-other_T1w.json index 84489b1c17..c872f1886a 100644 --- a/derivatives/data_preprocessed/sub-unf03/anat/sub-unf03_space-other_T1w.json +++ b/derivatives/data_preprocessed/sub-unf03/anat/sub-unf03_space-other_T1w.json @@ -1,66 +1,79 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma_fit", - "InstitutionName": "IUGM", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "Chemin_Queen-Mary_4565_Montreal_District_CA_H3W_1W5", - "DeviceSerialNumber": "167006", - "StationName": "MRC35049", - "BodyPartExamined": "SPINE", - "PatientPosition": "HFS", - "ProcedureStepDescription": "spine_generic", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "T1w", - "ProtocolName": "T1w", - "ScanningSequence": "GR_IR", - "SequenceVariant": "SK_SP_MP", - "ScanOptions": "IR", - "SequenceName": "_tfl3d1_16", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS3D", "DIS2D"], - "SeriesNumber": 2, - "AcquisitionTime": "13:55:31.160000", - "AcquisitionNumber": 1, - "SliceThickness": 1, - "SAR": 0.0661509, - "EchoTime": 0.00372, - "RepetitionTime": 2, - "InversionTime": 1, - "FlipAngle": 9, - "PartialFourier": 1, - "BaseResolution": 320, - "ShimSetting": [ - 620, - -7194, - -9127, - 77, - 28, - -20, - -10, - -23 ], - "TxRefAmp": 255.908, - "PhaseResolution": 1, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC1-7;NC1,2", - "PulseSequenceDetails": "%SiemensSeq%_tfl", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 81.25, - "PhaseEncodingSteps": 259, - "AcquisitionMatrixPE": 260, - "ReconMatrixPE": 320, - "ParallelReductionFactorInPlane": 2, - "PixelBandwidth": 150, - "DwellTime": 1.04e-05, - "ImageOrientationPatientDICOM": [ - 0, - 1, - 0, - -0.0226873, - 0, - -0.999743 ], - "InPlanePhaseEncodingDirectionDICOM": "ROW", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma_fit", + "InstitutionName": "IUGM", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "Chemin_Queen-Mary_4565_Montreal_District_CA_H3W_1W5", + "DeviceSerialNumber": "167006", + "StationName": "MRC35049", + "BodyPartExamined": "SPINE", + "PatientPosition": "HFS", + "ProcedureStepDescription": "spine_generic", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "T1w", + "ProtocolName": "T1w", + "ScanningSequence": "GR_IR", + "SequenceVariant": "SK_SP_MP", + "ScanOptions": "IR", + "SequenceName": "_tfl3d1_16", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS3D", + "DIS2D" + ], + "SeriesNumber": 2, + "AcquisitionTime": "13:55:31.160000", + "AcquisitionNumber": 1, + "SliceThickness": 1, + "SAR": 0.0661509, + "EchoTime": 0.00372, + "RepetitionTime": 2, + "InversionTime": 1, + "FlipAngle": 9, + "PartialFourier": 1, + "BaseResolution": 320, + "ShimSetting": [ + 620, + -7194, + -9127, + 77, + 28, + -20, + -10, + -23 + ], + "TxRefAmp": 255.908, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC1-7;NC1,2", + "PulseSequenceDetails": "%SiemensSeq%_tfl", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 81.25, + "PhaseEncodingSteps": 259, + "AcquisitionMatrixPE": 260, + "ReconMatrixPE": 320, + "ParallelReductionFactorInPlane": 2, + "PixelBandwidth": 150, + "DwellTime": 1.04e-05, + "ImageOrientationPatientDICOM": [ + 0, + 1, + 0, + -0.0226873, + 0, + -0.999743 + ], + "InPlanePhaseEncodingDirectionDICOM": "ROW", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-unf03/anat/sub-unf03_space-other_T2star.json b/derivatives/data_preprocessed/sub-unf03/anat/sub-unf03_space-other_T2star.json index 4df003e26f..14f97bd47b 100644 --- a/derivatives/data_preprocessed/sub-unf03/anat/sub-unf03_space-other_T2star.json +++ b/derivatives/data_preprocessed/sub-unf03/anat/sub-unf03_space-other_T2star.json @@ -73,5 +73,9 @@ "InPlanePhaseEncodingDirectionDICOM": "COL", "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0", - "AcquisitionDuration": 285.0 + "AcquisitionDuration": 285.0, + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-unf03/anat/sub-unf03_space-other_T2w.json b/derivatives/data_preprocessed/sub-unf03/anat/sub-unf03_space-other_T2w.json index 84eeadd52b..a35c5ef0a5 100644 --- a/derivatives/data_preprocessed/sub-unf03/anat/sub-unf03_space-other_T2w.json +++ b/derivatives/data_preprocessed/sub-unf03/anat/sub-unf03_space-other_T2w.json @@ -1,67 +1,80 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma_fit", - "InstitutionName": "IUGM", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "Chemin_Queen-Mary_4565_Montreal_District_CA_H3W_1W5", - "DeviceSerialNumber": "167006", - "StationName": "MRC35049", - "BodyPartExamined": "SPINE", - "PatientPosition": "HFS", - "ProcedureStepDescription": "spine_generic", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "T2w", - "ProtocolName": "T2w", - "ScanningSequence": "SE", - "SequenceVariant": "SK_SP_OSP", - "ScanOptions": "PFP", - "SequenceName": "_spcR_100", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS3D", "DIS2D"], - "SeriesNumber": 3, - "AcquisitionTime": "14:01:58.997500", - "AcquisitionNumber": 1, - "SliceThickness": 0.8, - "SAR": 0.60519, - "EchoTime": 0.12, - "RepetitionTime": 1.5, - "FlipAngle": 120, - "PartialFourier": 1, - "BaseResolution": 320, - "ShimSetting": [ - 620, - -7194, - -9127, - 77, - 28, - -20, - -10, - -23 ], - "TxRefAmp": 275.77, - "PhaseResolution": 1, - "PhaseOversampling": 0.8, - "ReceiveCoilName": "Spine_32", - "ReceiveCoilActiveElements": "HC5-7;NC1,2;SP1", - "PulseSequenceDetails": "%SiemensSeq%_tse_vfl", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 100, - "EchoTrainLength": 76, - "PhaseEncodingSteps": 422, - "AcquisitionMatrixPE": 320, - "ReconMatrixPE": 320, - "ParallelReductionFactorInPlane": 3, - "PixelBandwidth": 625, - "DwellTime": 2.5e-06, - "ImageOrientationPatientDICOM": [ - 1.11e-13, - 1, - 4.895e-12, - -0.0226874, - 4.897e-12, - -0.999743 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma_fit", + "InstitutionName": "IUGM", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "Chemin_Queen-Mary_4565_Montreal_District_CA_H3W_1W5", + "DeviceSerialNumber": "167006", + "StationName": "MRC35049", + "BodyPartExamined": "SPINE", + "PatientPosition": "HFS", + "ProcedureStepDescription": "spine_generic", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "T2w", + "ProtocolName": "T2w", + "ScanningSequence": "SE", + "SequenceVariant": "SK_SP_OSP", + "ScanOptions": "PFP", + "SequenceName": "_spcR_100", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS3D", + "DIS2D" + ], + "SeriesNumber": 3, + "AcquisitionTime": "14:01:58.997500", + "AcquisitionNumber": 1, + "SliceThickness": 0.8, + "SAR": 0.60519, + "EchoTime": 0.12, + "RepetitionTime": 1.5, + "FlipAngle": 120, + "PartialFourier": 1, + "BaseResolution": 320, + "ShimSetting": [ + 620, + -7194, + -9127, + 77, + 28, + -20, + -10, + -23 + ], + "TxRefAmp": 275.77, + "PhaseResolution": 1, + "PhaseOversampling": 0.8, + "ReceiveCoilName": "Spine_32", + "ReceiveCoilActiveElements": "HC5-7;NC1,2;SP1", + "PulseSequenceDetails": "%SiemensSeq%_tse_vfl", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "EchoTrainLength": 76, + "PhaseEncodingSteps": 422, + "AcquisitionMatrixPE": 320, + "ReconMatrixPE": 320, + "ParallelReductionFactorInPlane": 3, + "PixelBandwidth": 625, + "DwellTime": 2.5e-06, + "ImageOrientationPatientDICOM": [ + 1.11e-13, + 1, + 4.895e-12, + -0.0226874, + 4.897e-12, + -0.999743 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-unf04/anat/sub-unf04_flip-1_mt-on_space-other_MTS.json b/derivatives/data_preprocessed/sub-unf04/anat/sub-unf04_flip-1_mt-on_space-other_MTS.json index 5f067f4c23..045729d45f 100644 --- a/derivatives/data_preprocessed/sub-unf04/anat/sub-unf04_flip-1_mt-on_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-unf04/anat/sub-unf04_flip-1_mt-on_space-other_MTS.json @@ -1,65 +1,75 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma_fit", - "InstitutionName": "IUGM", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "Chemin_Queen-Mary_4565_Montreal_District_CA_H3W_1W5", - "DeviceSerialNumber": "167006", - "StationName": "MRC35049", - "BodyPartExamined": "SPINE", - "PatientPosition": "HFS", - "ProcedureStepDescription": "spine_generic", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-MT1", - "ProtocolName": "GRE-MT1", - "ScanningSequence": "GR", - "SequenceVariant": "MTC_SP", - "ScanOptions": "MT", - "SequenceName": "_fl3d1", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "DIS2D"], - "SeriesNumber": 5, - "AcquisitionTime": "14:46:28.955000", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SAR": 0.537016, - "EchoTime": 0.00313, - "RepetitionTime": 0.035, - "FlipAngle": 9, - "PartialFourier": 1, - "BaseResolution": 256, - "ShimSetting": [ - 568, - -7363, - -9074, - -1624, - -344, - 2133, - -103, - 16 ], - "TxRefAmp": 275.85, - "PhaseResolution": 1, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC7;NC1,2", - "PulseSequenceDetails": "%SiemensSeq%_gre", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 100, - "PhaseEncodingSteps": 255, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 256, - "ParallelReductionFactorInPlane": 2, - "PixelBandwidth": 260, - "DwellTime": 7.5e-06, - "ImageOrientationPatientDICOM": [ - 1, - 0, - 0, - 0, - 0.996195, - 0.0871557 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma_fit", + "InstitutionName": "IUGM", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "Chemin_Queen-Mary_4565_Montreal_District_CA_H3W_1W5", + "DeviceSerialNumber": "167006", + "StationName": "MRC35049", + "BodyPartExamined": "SPINE", + "PatientPosition": "HFS", + "ProcedureStepDescription": "spine_generic", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-MT1", + "ProtocolName": "GRE-MT1", + "ScanningSequence": "GR", + "SequenceVariant": "MTC_SP", + "ScanOptions": "MT", + "SequenceName": "_fl3d1", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "DIS2D" + ], + "SeriesNumber": 5, + "AcquisitionTime": "14:46:28.955000", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SAR": 0.537016, + "EchoTime": 0.00313, + "RepetitionTime": 0.035, + "FlipAngle": 9, + "PartialFourier": 1, + "BaseResolution": 256, + "ShimSetting": [ + 568, + -7363, + -9074, + -1624, + -344, + 2133, + -103, + 16 + ], + "TxRefAmp": 275.85, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC7;NC1,2", + "PulseSequenceDetails": "%SiemensSeq%_gre", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 255, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "ParallelReductionFactorInPlane": 2, + "PixelBandwidth": 260, + "DwellTime": 7.5e-06, + "ImageOrientationPatientDICOM": [ + 1, + 0, + 0, + 0, + 0.996195, + 0.0871557 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-unf04/anat/sub-unf04_flip-2_mt-off_space-other_MTS.json b/derivatives/data_preprocessed/sub-unf04/anat/sub-unf04_flip-2_mt-off_space-other_MTS.json index 19879da9b9..dcaf49571e 100644 --- a/derivatives/data_preprocessed/sub-unf04/anat/sub-unf04_flip-2_mt-off_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-unf04/anat/sub-unf04_flip-2_mt-off_space-other_MTS.json @@ -1,64 +1,74 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma_fit", - "InstitutionName": "IUGM", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "Chemin_Queen-Mary_4565_Montreal_District_CA_H3W_1W5", - "DeviceSerialNumber": "167006", - "StationName": "MRC35049", - "BodyPartExamined": "SPINE", - "PatientPosition": "HFS", - "ProcedureStepDescription": "spine_generic", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-T1w", - "ProtocolName": "GRE-T1w", - "ScanningSequence": "GR", - "SequenceVariant": "SP", - "SequenceName": "_fl3d1", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "DIS2D"], - "SeriesNumber": 7, - "AcquisitionTime": "14:50:53.967500", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SAR": 0.0348184, - "EchoTime": 0.00313, - "RepetitionTime": 0.015, - "FlipAngle": 15, - "PartialFourier": 1, - "BaseResolution": 256, - "ShimSetting": [ - 568, - -7363, - -9074, - -1624, - -344, - 2133, - -103, - 16 ], - "TxRefAmp": 275.85, - "PhaseResolution": 1, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC7;NC1,2", - "PulseSequenceDetails": "%SiemensSeq%_gre", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 100, - "PhaseEncodingSteps": 255, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 256, - "ParallelReductionFactorInPlane": 2, - "PixelBandwidth": 260, - "DwellTime": 7.5e-06, - "ImageOrientationPatientDICOM": [ - 1, - 0, - 0, - 0, - 0.996195, - 0.0871557 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma_fit", + "InstitutionName": "IUGM", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "Chemin_Queen-Mary_4565_Montreal_District_CA_H3W_1W5", + "DeviceSerialNumber": "167006", + "StationName": "MRC35049", + "BodyPartExamined": "SPINE", + "PatientPosition": "HFS", + "ProcedureStepDescription": "spine_generic", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-T1w", + "ProtocolName": "GRE-T1w", + "ScanningSequence": "GR", + "SequenceVariant": "SP", + "SequenceName": "_fl3d1", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "DIS2D" + ], + "SeriesNumber": 7, + "AcquisitionTime": "14:50:53.967500", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SAR": 0.0348184, + "EchoTime": 0.00313, + "RepetitionTime": 0.015, + "FlipAngle": 15, + "PartialFourier": 1, + "BaseResolution": 256, + "ShimSetting": [ + 568, + -7363, + -9074, + -1624, + -344, + 2133, + -103, + 16 + ], + "TxRefAmp": 275.85, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC7;NC1,2", + "PulseSequenceDetails": "%SiemensSeq%_gre", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 255, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "ParallelReductionFactorInPlane": 2, + "PixelBandwidth": 260, + "DwellTime": 7.5e-06, + "ImageOrientationPatientDICOM": [ + 1, + 0, + 0, + 0, + 0.996195, + 0.0871557 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-unf04/anat/sub-unf04_space-other_T1w.json b/derivatives/data_preprocessed/sub-unf04/anat/sub-unf04_space-other_T1w.json index de5f3cbd9b..f09c3c2419 100644 --- a/derivatives/data_preprocessed/sub-unf04/anat/sub-unf04_space-other_T1w.json +++ b/derivatives/data_preprocessed/sub-unf04/anat/sub-unf04_space-other_T1w.json @@ -1,66 +1,79 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma_fit", - "InstitutionName": "IUGM", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "Chemin_Queen-Mary_4565_Montreal_District_CA_H3W_1W5", - "DeviceSerialNumber": "167006", - "StationName": "MRC35049", - "BodyPartExamined": "SPINE", - "PatientPosition": "HFS", - "ProcedureStepDescription": "spine_generic", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "T1w", - "ProtocolName": "T1w", - "ScanningSequence": "GR_IR", - "SequenceVariant": "SK_SP_MP", - "ScanOptions": "IR", - "SequenceName": "_tfl3d1_16", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS3D", "DIS2D"], - "SeriesNumber": 2, - "AcquisitionTime": "14:33:24.197500", - "AcquisitionNumber": 1, - "SliceThickness": 1, - "SAR": 0.0606852, - "EchoTime": 0.00372, - "RepetitionTime": 2, - "InversionTime": 1, - "FlipAngle": 9, - "PartialFourier": 1, - "BaseResolution": 320, - "ShimSetting": [ - 620, - -7194, - -9127, - 77, - 28, - -20, - -10, - -23 ], - "TxRefAmp": 260.369, - "PhaseResolution": 1, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC1-7;NC1,2", - "PulseSequenceDetails": "%SiemensSeq%_tfl", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 81.25, - "PhaseEncodingSteps": 259, - "AcquisitionMatrixPE": 260, - "ReconMatrixPE": 320, - "ParallelReductionFactorInPlane": 2, - "PixelBandwidth": 150, - "DwellTime": 1.04e-05, - "ImageOrientationPatientDICOM": [ - 0, - 1, - 0, - 0, - 0, - -1 ], - "InPlanePhaseEncodingDirectionDICOM": "ROW", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma_fit", + "InstitutionName": "IUGM", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "Chemin_Queen-Mary_4565_Montreal_District_CA_H3W_1W5", + "DeviceSerialNumber": "167006", + "StationName": "MRC35049", + "BodyPartExamined": "SPINE", + "PatientPosition": "HFS", + "ProcedureStepDescription": "spine_generic", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "T1w", + "ProtocolName": "T1w", + "ScanningSequence": "GR_IR", + "SequenceVariant": "SK_SP_MP", + "ScanOptions": "IR", + "SequenceName": "_tfl3d1_16", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS3D", + "DIS2D" + ], + "SeriesNumber": 2, + "AcquisitionTime": "14:33:24.197500", + "AcquisitionNumber": 1, + "SliceThickness": 1, + "SAR": 0.0606852, + "EchoTime": 0.00372, + "RepetitionTime": 2, + "InversionTime": 1, + "FlipAngle": 9, + "PartialFourier": 1, + "BaseResolution": 320, + "ShimSetting": [ + 620, + -7194, + -9127, + 77, + 28, + -20, + -10, + -23 + ], + "TxRefAmp": 260.369, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC1-7;NC1,2", + "PulseSequenceDetails": "%SiemensSeq%_tfl", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 81.25, + "PhaseEncodingSteps": 259, + "AcquisitionMatrixPE": 260, + "ReconMatrixPE": 320, + "ParallelReductionFactorInPlane": 2, + "PixelBandwidth": 150, + "DwellTime": 1.04e-05, + "ImageOrientationPatientDICOM": [ + 0, + 1, + 0, + 0, + 0, + -1 + ], + "InPlanePhaseEncodingDirectionDICOM": "ROW", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-unf04/anat/sub-unf04_space-other_T2star.json b/derivatives/data_preprocessed/sub-unf04/anat/sub-unf04_space-other_T2star.json index 724578f905..dd3898476e 100644 --- a/derivatives/data_preprocessed/sub-unf04/anat/sub-unf04_space-other_T2star.json +++ b/derivatives/data_preprocessed/sub-unf04/anat/sub-unf04_space-other_T2star.json @@ -73,5 +73,9 @@ "InPlanePhaseEncodingDirectionDICOM": "COL", "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0", - "AcquisitionDuration": 285.0 + "AcquisitionDuration": 285.0, + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-unf04/anat/sub-unf04_space-other_T2w.json b/derivatives/data_preprocessed/sub-unf04/anat/sub-unf04_space-other_T2w.json index affa2f22a2..f3c1e2f805 100644 --- a/derivatives/data_preprocessed/sub-unf04/anat/sub-unf04_space-other_T2w.json +++ b/derivatives/data_preprocessed/sub-unf04/anat/sub-unf04_space-other_T2w.json @@ -1,65 +1,78 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma_fit", - "InstitutionName": "IUGM", - "InstitutionAddress": "Chemin_Queen-Mary_4565_Montreal_District_CA_H3W_1W5", - "DeviceSerialNumber": "167006", - "StationName": "MRC35049", - "BodyPartExamined": "SPINE", - "PatientPosition": "HFS", - "ProcedureStepDescription": "spine_generic", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "T2w", - "ProtocolName": "T2w", - "ScanningSequence": "SE", - "SequenceVariant": "SK_SP_OSP", - "ScanOptions": "PFP", - "SequenceName": "_spcR_100", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS3D", "DIS2D"], - "SeriesNumber": 3, - "AcquisitionTime": "14:38:24.090000", - "AcquisitionNumber": 1, - "SliceThickness": 0.8, - "SAR": 0.57672, - "EchoTime": 0.12, - "RepetitionTime": 1.5, - "FlipAngle": 120, - "PartialFourier": 1, - "BaseResolution": 320, - "ShimSetting": [ - 620, - -7194, - -9127, - 77, - 28, - -20, - -10, - -23 ], - "TxRefAmp": 284.993, - "PhaseResolution": 1, - "PhaseOversampling": 0.8, - "ReceiveCoilName": "Spine_32", - "ReceiveCoilActiveElements": "HC5-7;NC1,2;SP1", - "PulseSequenceDetails": "%SiemensSeq%_tse_vfl", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 100, - "EchoTrainLength": 76, - "PhaseEncodingSteps": 422, - "AcquisitionMatrixPE": 320, - "ReconMatrixPE": 320, - "ParallelReductionFactorInPlane": 3, - "PixelBandwidth": 625, - "ImageOrientationPatientDICOM": [ - 0, - 1, - 4.897e-12, - 0, - 4.897e-12, - -1 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma_fit", + "InstitutionName": "IUGM", + "InstitutionAddress": "Chemin_Queen-Mary_4565_Montreal_District_CA_H3W_1W5", + "DeviceSerialNumber": "167006", + "StationName": "MRC35049", + "BodyPartExamined": "SPINE", + "PatientPosition": "HFS", + "ProcedureStepDescription": "spine_generic", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "T2w", + "ProtocolName": "T2w", + "ScanningSequence": "SE", + "SequenceVariant": "SK_SP_OSP", + "ScanOptions": "PFP", + "SequenceName": "_spcR_100", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS3D", + "DIS2D" + ], + "SeriesNumber": 3, + "AcquisitionTime": "14:38:24.090000", + "AcquisitionNumber": 1, + "SliceThickness": 0.8, + "SAR": 0.57672, + "EchoTime": 0.12, + "RepetitionTime": 1.5, + "FlipAngle": 120, + "PartialFourier": 1, + "BaseResolution": 320, + "ShimSetting": [ + 620, + -7194, + -9127, + 77, + 28, + -20, + -10, + -23 + ], + "TxRefAmp": 284.993, + "PhaseResolution": 1, + "PhaseOversampling": 0.8, + "ReceiveCoilName": "Spine_32", + "ReceiveCoilActiveElements": "HC5-7;NC1,2;SP1", + "PulseSequenceDetails": "%SiemensSeq%_tse_vfl", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "EchoTrainLength": 76, + "PhaseEncodingSteps": 422, + "AcquisitionMatrixPE": 320, + "ReconMatrixPE": 320, + "ParallelReductionFactorInPlane": 3, + "PixelBandwidth": 625, + "ImageOrientationPatientDICOM": [ + 0, + 1, + 4.897e-12, + 0, + 4.897e-12, + -1 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-unf05/anat/sub-unf05_flip-1_mt-on_space-other_MTS.json b/derivatives/data_preprocessed/sub-unf05/anat/sub-unf05_flip-1_mt-on_space-other_MTS.json index 862bf5a03c..afe4a080e5 100644 --- a/derivatives/data_preprocessed/sub-unf05/anat/sub-unf05_flip-1_mt-on_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-unf05/anat/sub-unf05_flip-1_mt-on_space-other_MTS.json @@ -1,65 +1,75 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma_fit", - "InstitutionName": "IUGM", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "Chemin_Queen-Mary_4565_Montreal_District_CA_H3W_1W5", - "DeviceSerialNumber": "167006", - "StationName": "MRC35049", - "BodyPartExamined": "SPINE", - "PatientPosition": "HFS", - "ProcedureStepDescription": "spine_generic", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-MT1_RL", - "ProtocolName": "GRE-MT1_RL", - "ScanningSequence": "GR", - "SequenceVariant": "MTC_SP", - "ScanOptions": "MT", - "SequenceName": "_fl3d1", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "DIS2D"], - "SeriesNumber": 9, - "AcquisitionTime": "12:57:4.682500", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SAR": 0.47917, - "EchoTime": 0.00313, - "RepetitionTime": 0.035, - "FlipAngle": 9, - "PartialFourier": 1, - "BaseResolution": 256, - "ShimSetting": [ - 636, - -6996, - -8943, - -1641, - -154, - 2626, - -1454, - 47 ], - "TxRefAmp": 255.049, - "PhaseResolution": 1, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC5-7;NC1,2", - "PulseSequenceDetails": "%SiemensSeq%_gre", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 100, - "PhaseEncodingSteps": 255, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 256, - "ParallelReductionFactorInPlane": 2, - "PixelBandwidth": 260, - "DwellTime": 7.5e-06, - "ImageOrientationPatientDICOM": [ - 1, - 4.791e-12, - 1.01e-12, - -4.897e-12, - 0.978509, - 0.206204 ], - "InPlanePhaseEncodingDirectionDICOM": "ROW", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma_fit", + "InstitutionName": "IUGM", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "Chemin_Queen-Mary_4565_Montreal_District_CA_H3W_1W5", + "DeviceSerialNumber": "167006", + "StationName": "MRC35049", + "BodyPartExamined": "SPINE", + "PatientPosition": "HFS", + "ProcedureStepDescription": "spine_generic", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-MT1_RL", + "ProtocolName": "GRE-MT1_RL", + "ScanningSequence": "GR", + "SequenceVariant": "MTC_SP", + "ScanOptions": "MT", + "SequenceName": "_fl3d1", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "DIS2D" + ], + "SeriesNumber": 9, + "AcquisitionTime": "12:57:4.682500", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SAR": 0.47917, + "EchoTime": 0.00313, + "RepetitionTime": 0.035, + "FlipAngle": 9, + "PartialFourier": 1, + "BaseResolution": 256, + "ShimSetting": [ + 636, + -6996, + -8943, + -1641, + -154, + 2626, + -1454, + 47 + ], + "TxRefAmp": 255.049, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC5-7;NC1,2", + "PulseSequenceDetails": "%SiemensSeq%_gre", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 255, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "ParallelReductionFactorInPlane": 2, + "PixelBandwidth": 260, + "DwellTime": 7.5e-06, + "ImageOrientationPatientDICOM": [ + 1, + 4.791e-12, + 1.01e-12, + -4.897e-12, + 0.978509, + 0.206204 + ], + "InPlanePhaseEncodingDirectionDICOM": "ROW", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-unf05/anat/sub-unf05_flip-2_mt-off_space-other_MTS.json b/derivatives/data_preprocessed/sub-unf05/anat/sub-unf05_flip-2_mt-off_space-other_MTS.json index f7fa7dfe0c..7e13d6553c 100644 --- a/derivatives/data_preprocessed/sub-unf05/anat/sub-unf05_flip-2_mt-off_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-unf05/anat/sub-unf05_flip-2_mt-off_space-other_MTS.json @@ -1,64 +1,74 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma_fit", - "InstitutionName": "IUGM", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "Chemin_Queen-Mary_4565_Montreal_District_CA_H3W_1W5", - "DeviceSerialNumber": "167006", - "StationName": "MRC35049", - "BodyPartExamined": "SPINE", - "PatientPosition": "HFS", - "ProcedureStepDescription": "spine_generic", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-T1w_RL", - "ProtocolName": "GRE-T1w_RL", - "ScanningSequence": "GR", - "SequenceVariant": "SP", - "SequenceName": "_fl3d1", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "DIS2D"], - "SeriesNumber": 11, - "AcquisitionTime": "13:01:29.947500", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SAR": 0.0310679, - "EchoTime": 0.00313, - "RepetitionTime": 0.015, - "FlipAngle": 15, - "PartialFourier": 1, - "BaseResolution": 256, - "ShimSetting": [ - 636, - -6996, - -8943, - -1641, - -154, - 2626, - -1454, - 47 ], - "TxRefAmp": 255.049, - "PhaseResolution": 1, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC5-7;NC1,2", - "PulseSequenceDetails": "%SiemensSeq%_gre", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 100, - "PhaseEncodingSteps": 255, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 256, - "ParallelReductionFactorInPlane": 2, - "PixelBandwidth": 260, - "DwellTime": 7.5e-06, - "ImageOrientationPatientDICOM": [ - 1, - 4.791e-12, - 1.01e-12, - -4.897e-12, - 0.978509, - 0.206204 ], - "InPlanePhaseEncodingDirectionDICOM": "ROW", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma_fit", + "InstitutionName": "IUGM", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "Chemin_Queen-Mary_4565_Montreal_District_CA_H3W_1W5", + "DeviceSerialNumber": "167006", + "StationName": "MRC35049", + "BodyPartExamined": "SPINE", + "PatientPosition": "HFS", + "ProcedureStepDescription": "spine_generic", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-T1w_RL", + "ProtocolName": "GRE-T1w_RL", + "ScanningSequence": "GR", + "SequenceVariant": "SP", + "SequenceName": "_fl3d1", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "DIS2D" + ], + "SeriesNumber": 11, + "AcquisitionTime": "13:01:29.947500", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SAR": 0.0310679, + "EchoTime": 0.00313, + "RepetitionTime": 0.015, + "FlipAngle": 15, + "PartialFourier": 1, + "BaseResolution": 256, + "ShimSetting": [ + 636, + -6996, + -8943, + -1641, + -154, + 2626, + -1454, + 47 + ], + "TxRefAmp": 255.049, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC5-7;NC1,2", + "PulseSequenceDetails": "%SiemensSeq%_gre", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 255, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "ParallelReductionFactorInPlane": 2, + "PixelBandwidth": 260, + "DwellTime": 7.5e-06, + "ImageOrientationPatientDICOM": [ + 1, + 4.791e-12, + 1.01e-12, + -4.897e-12, + 0.978509, + 0.206204 + ], + "InPlanePhaseEncodingDirectionDICOM": "ROW", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-unf05/anat/sub-unf05_space-other_T1w.json b/derivatives/data_preprocessed/sub-unf05/anat/sub-unf05_space-other_T1w.json index bc1469b637..7b50659711 100644 --- a/derivatives/data_preprocessed/sub-unf05/anat/sub-unf05_space-other_T1w.json +++ b/derivatives/data_preprocessed/sub-unf05/anat/sub-unf05_space-other_T1w.json @@ -1,66 +1,79 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma_fit", - "InstitutionName": "IUGM", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "Chemin_Queen-Mary_4565_Montreal_District_CA_H3W_1W5", - "DeviceSerialNumber": "167006", - "StationName": "MRC35049", - "BodyPartExamined": "SPINE", - "PatientPosition": "HFS", - "ProcedureStepDescription": "spine_generic", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "T1w", - "ProtocolName": "T1w", - "ScanningSequence": "GR_IR", - "SequenceVariant": "SK_SP_MP", - "ScanOptions": "IR", - "SequenceName": "_tfl3d1_16", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS3D", "DIS2D"], - "SeriesNumber": 2, - "AcquisitionTime": "12:30:0.017500", - "AcquisitionNumber": 1, - "SliceThickness": 1, - "SAR": 0.0540696, - "EchoTime": 0.00372, - "RepetitionTime": 2, - "InversionTime": 1, - "FlipAngle": 9, - "PartialFourier": 1, - "BaseResolution": 320, - "ShimSetting": [ - 620, - -7194, - -9127, - 77, - 28, - -20, - -10, - -23 ], - "TxRefAmp": 238.232, - "PhaseResolution": 1, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC1-7;NC1,2", - "PulseSequenceDetails": "%SiemensSeq%_tfl", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 81.25, - "PhaseEncodingSteps": 259, - "AcquisitionMatrixPE": 260, - "ReconMatrixPE": 320, - "ParallelReductionFactorInPlane": 2, - "PixelBandwidth": 150, - "DwellTime": 1.04e-05, - "ImageOrientationPatientDICOM": [ - 0, - 1, - 0, - 0, - 0, - -1 ], - "InPlanePhaseEncodingDirectionDICOM": "ROW", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma_fit", + "InstitutionName": "IUGM", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "Chemin_Queen-Mary_4565_Montreal_District_CA_H3W_1W5", + "DeviceSerialNumber": "167006", + "StationName": "MRC35049", + "BodyPartExamined": "SPINE", + "PatientPosition": "HFS", + "ProcedureStepDescription": "spine_generic", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "T1w", + "ProtocolName": "T1w", + "ScanningSequence": "GR_IR", + "SequenceVariant": "SK_SP_MP", + "ScanOptions": "IR", + "SequenceName": "_tfl3d1_16", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS3D", + "DIS2D" + ], + "SeriesNumber": 2, + "AcquisitionTime": "12:30:0.017500", + "AcquisitionNumber": 1, + "SliceThickness": 1, + "SAR": 0.0540696, + "EchoTime": 0.00372, + "RepetitionTime": 2, + "InversionTime": 1, + "FlipAngle": 9, + "PartialFourier": 1, + "BaseResolution": 320, + "ShimSetting": [ + 620, + -7194, + -9127, + 77, + 28, + -20, + -10, + -23 + ], + "TxRefAmp": 238.232, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC1-7;NC1,2", + "PulseSequenceDetails": "%SiemensSeq%_tfl", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 81.25, + "PhaseEncodingSteps": 259, + "AcquisitionMatrixPE": 260, + "ReconMatrixPE": 320, + "ParallelReductionFactorInPlane": 2, + "PixelBandwidth": 150, + "DwellTime": 1.04e-05, + "ImageOrientationPatientDICOM": [ + 0, + 1, + 0, + 0, + 0, + -1 + ], + "InPlanePhaseEncodingDirectionDICOM": "ROW", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-unf05/anat/sub-unf05_space-other_T2star.json b/derivatives/data_preprocessed/sub-unf05/anat/sub-unf05_space-other_T2star.json index a24b90fee3..78f8fa3241 100644 --- a/derivatives/data_preprocessed/sub-unf05/anat/sub-unf05_space-other_T2star.json +++ b/derivatives/data_preprocessed/sub-unf05/anat/sub-unf05_space-other_T2star.json @@ -73,5 +73,9 @@ "InPlanePhaseEncodingDirectionDICOM": "COL", "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0", - "AcquisitionDuration": 285.0 + "AcquisitionDuration": 285.0, + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-unf05/anat/sub-unf05_space-other_T2w.json b/derivatives/data_preprocessed/sub-unf05/anat/sub-unf05_space-other_T2w.json index 44e2ac00e2..45ed470bf0 100644 --- a/derivatives/data_preprocessed/sub-unf05/anat/sub-unf05_space-other_T2w.json +++ b/derivatives/data_preprocessed/sub-unf05/anat/sub-unf05_space-other_T2w.json @@ -1,67 +1,80 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma_fit", - "InstitutionName": "IUGM", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "Chemin_Queen-Mary_4565_Montreal_District_CA_H3W_1W5", - "DeviceSerialNumber": "167006", - "StationName": "MRC35049", - "BodyPartExamined": "SPINE", - "PatientPosition": "HFS", - "ProcedureStepDescription": "spine_generic", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "T2w", - "ProtocolName": "T2w", - "ScanningSequence": "SE", - "SequenceVariant": "SK_SP_OSP", - "ScanOptions": "PFP", - "SequenceName": "_spcR_100", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS3D", "DIS2D"], - "SeriesNumber": 3, - "AcquisitionTime": "12:36:22.682500", - "AcquisitionNumber": 1, - "SliceThickness": 0.8, - "SAR": 0.485196, - "EchoTime": 0.12, - "RepetitionTime": 1.5, - "FlipAngle": 120, - "PartialFourier": 1, - "BaseResolution": 320, - "ShimSetting": [ - 620, - -7194, - -9127, - 77, - 28, - -20, - -10, - -23 ], - "TxRefAmp": 254.813, - "PhaseResolution": 1, - "PhaseOversampling": 0.8, - "ReceiveCoilName": "Spine_32", - "ReceiveCoilActiveElements": "HC3-7;NC1,2;SP1", - "PulseSequenceDetails": "%SiemensSeq%_tse_vfl", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 100, - "EchoTrainLength": 76, - "PhaseEncodingSteps": 422, - "AcquisitionMatrixPE": 320, - "ReconMatrixPE": 320, - "ParallelReductionFactorInPlane": 3, - "PixelBandwidth": 625, - "DwellTime": 2.5e-06, - "ImageOrientationPatientDICOM": [ - 0, - 1, - 4.897e-12, - 0, - 4.897e-12, - -1 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma_fit", + "InstitutionName": "IUGM", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "Chemin_Queen-Mary_4565_Montreal_District_CA_H3W_1W5", + "DeviceSerialNumber": "167006", + "StationName": "MRC35049", + "BodyPartExamined": "SPINE", + "PatientPosition": "HFS", + "ProcedureStepDescription": "spine_generic", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "T2w", + "ProtocolName": "T2w", + "ScanningSequence": "SE", + "SequenceVariant": "SK_SP_OSP", + "ScanOptions": "PFP", + "SequenceName": "_spcR_100", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS3D", + "DIS2D" + ], + "SeriesNumber": 3, + "AcquisitionTime": "12:36:22.682500", + "AcquisitionNumber": 1, + "SliceThickness": 0.8, + "SAR": 0.485196, + "EchoTime": 0.12, + "RepetitionTime": 1.5, + "FlipAngle": 120, + "PartialFourier": 1, + "BaseResolution": 320, + "ShimSetting": [ + 620, + -7194, + -9127, + 77, + 28, + -20, + -10, + -23 + ], + "TxRefAmp": 254.813, + "PhaseResolution": 1, + "PhaseOversampling": 0.8, + "ReceiveCoilName": "Spine_32", + "ReceiveCoilActiveElements": "HC3-7;NC1,2;SP1", + "PulseSequenceDetails": "%SiemensSeq%_tse_vfl", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "EchoTrainLength": 76, + "PhaseEncodingSteps": 422, + "AcquisitionMatrixPE": 320, + "ReconMatrixPE": 320, + "ParallelReductionFactorInPlane": 3, + "PixelBandwidth": 625, + "DwellTime": 2.5e-06, + "ImageOrientationPatientDICOM": [ + 0, + 1, + 4.897e-12, + 0, + 4.897e-12, + -1 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-unf06/anat/sub-unf06_flip-1_mt-on_space-other_MTS.json b/derivatives/data_preprocessed/sub-unf06/anat/sub-unf06_flip-1_mt-on_space-other_MTS.json index 43f92410c1..b8a2039dfe 100644 --- a/derivatives/data_preprocessed/sub-unf06/anat/sub-unf06_flip-1_mt-on_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-unf06/anat/sub-unf06_flip-1_mt-on_space-other_MTS.json @@ -1,65 +1,75 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma_fit", - "InstitutionName": "IUGM", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "Chemin_Queen-Mary_4565_Montreal_District_CA_H3W_1W5", - "DeviceSerialNumber": "167006", - "StationName": "MRC35049", - "BodyPartExamined": "SPINE", - "PatientPosition": "HFS", - "ProcedureStepDescription": "spine_generic", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-MT1", - "ProtocolName": "GRE-MT1", - "ScanningSequence": "GR", - "SequenceVariant": "MTC_SP", - "ScanOptions": "MT", - "SequenceName": "_fl3d1", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "DIS2D"], - "SeriesNumber": 5, - "AcquisitionTime": "13:23:6.960000", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SAR": 0.52093, - "EchoTime": 0.00313, - "RepetitionTime": 0.035, - "FlipAngle": 9, - "PartialFourier": 1, - "BaseResolution": 256, - "ShimSetting": [ - 640, - -7312, - -9004, - -1033, - -237, - 1907, - -463, - 174 ], - "TxRefAmp": 253.992, - "PhaseResolution": 1, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC5-7;NC1,2", - "PulseSequenceDetails": "%SiemensSeq%_gre", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 100, - "PhaseEncodingSteps": 255, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 256, - "ParallelReductionFactorInPlane": 2, - "PixelBandwidth": 260, - "DwellTime": 7.5e-06, - "ImageOrientationPatientDICOM": [ - 1, - 0, - 0, - 0, - 0.985996, - 0.166769 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma_fit", + "InstitutionName": "IUGM", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "Chemin_Queen-Mary_4565_Montreal_District_CA_H3W_1W5", + "DeviceSerialNumber": "167006", + "StationName": "MRC35049", + "BodyPartExamined": "SPINE", + "PatientPosition": "HFS", + "ProcedureStepDescription": "spine_generic", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-MT1", + "ProtocolName": "GRE-MT1", + "ScanningSequence": "GR", + "SequenceVariant": "MTC_SP", + "ScanOptions": "MT", + "SequenceName": "_fl3d1", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "DIS2D" + ], + "SeriesNumber": 5, + "AcquisitionTime": "13:23:6.960000", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SAR": 0.52093, + "EchoTime": 0.00313, + "RepetitionTime": 0.035, + "FlipAngle": 9, + "PartialFourier": 1, + "BaseResolution": 256, + "ShimSetting": [ + 640, + -7312, + -9004, + -1033, + -237, + 1907, + -463, + 174 + ], + "TxRefAmp": 253.992, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC5-7;NC1,2", + "PulseSequenceDetails": "%SiemensSeq%_gre", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 255, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "ParallelReductionFactorInPlane": 2, + "PixelBandwidth": 260, + "DwellTime": 7.5e-06, + "ImageOrientationPatientDICOM": [ + 1, + 0, + 0, + 0, + 0.985996, + 0.166769 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-unf06/anat/sub-unf06_flip-2_mt-off_space-other_MTS.json b/derivatives/data_preprocessed/sub-unf06/anat/sub-unf06_flip-2_mt-off_space-other_MTS.json index 9871cd4020..0e49a4a805 100644 --- a/derivatives/data_preprocessed/sub-unf06/anat/sub-unf06_flip-2_mt-off_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-unf06/anat/sub-unf06_flip-2_mt-off_space-other_MTS.json @@ -1,64 +1,74 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma_fit", - "InstitutionName": "IUGM", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "Chemin_Queen-Mary_4565_Montreal_District_CA_H3W_1W5", - "DeviceSerialNumber": "167006", - "StationName": "MRC35049", - "BodyPartExamined": "SPINE", - "PatientPosition": "HFS", - "ProcedureStepDescription": "spine_generic", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-T1w", - "ProtocolName": "GRE-T1w", - "ScanningSequence": "GR", - "SequenceVariant": "SP", - "SequenceName": "_fl3d1", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "DIS2D"], - "SeriesNumber": 7, - "AcquisitionTime": "13:27:31.972500", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SAR": 0.0337755, - "EchoTime": 0.00313, - "RepetitionTime": 0.015, - "FlipAngle": 15, - "PartialFourier": 1, - "BaseResolution": 256, - "ShimSetting": [ - 640, - -7312, - -9004, - -1033, - -237, - 1907, - -463, - 174 ], - "TxRefAmp": 253.992, - "PhaseResolution": 1, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC5-7;NC1,2", - "PulseSequenceDetails": "%SiemensSeq%_gre", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 100, - "PhaseEncodingSteps": 255, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 256, - "ParallelReductionFactorInPlane": 2, - "PixelBandwidth": 260, - "DwellTime": 7.5e-06, - "ImageOrientationPatientDICOM": [ - 1, - 0, - 0, - 0, - 0.985996, - 0.166769 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma_fit", + "InstitutionName": "IUGM", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "Chemin_Queen-Mary_4565_Montreal_District_CA_H3W_1W5", + "DeviceSerialNumber": "167006", + "StationName": "MRC35049", + "BodyPartExamined": "SPINE", + "PatientPosition": "HFS", + "ProcedureStepDescription": "spine_generic", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-T1w", + "ProtocolName": "GRE-T1w", + "ScanningSequence": "GR", + "SequenceVariant": "SP", + "SequenceName": "_fl3d1", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "DIS2D" + ], + "SeriesNumber": 7, + "AcquisitionTime": "13:27:31.972500", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SAR": 0.0337755, + "EchoTime": 0.00313, + "RepetitionTime": 0.015, + "FlipAngle": 15, + "PartialFourier": 1, + "BaseResolution": 256, + "ShimSetting": [ + 640, + -7312, + -9004, + -1033, + -237, + 1907, + -463, + 174 + ], + "TxRefAmp": 253.992, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC5-7;NC1,2", + "PulseSequenceDetails": "%SiemensSeq%_gre", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 255, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "ParallelReductionFactorInPlane": 2, + "PixelBandwidth": 260, + "DwellTime": 7.5e-06, + "ImageOrientationPatientDICOM": [ + 1, + 0, + 0, + 0, + 0.985996, + 0.166769 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-unf06/anat/sub-unf06_space-other_T1w.json b/derivatives/data_preprocessed/sub-unf06/anat/sub-unf06_space-other_T1w.json index 7fbacbf27e..160a12f267 100644 --- a/derivatives/data_preprocessed/sub-unf06/anat/sub-unf06_space-other_T1w.json +++ b/derivatives/data_preprocessed/sub-unf06/anat/sub-unf06_space-other_T1w.json @@ -1,66 +1,79 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma_fit", - "InstitutionName": "IUGM", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "Chemin_Queen-Mary_4565_Montreal_District_CA_H3W_1W5", - "DeviceSerialNumber": "167006", - "StationName": "MRC35049", - "BodyPartExamined": "SPINE", - "PatientPosition": "HFS", - "ProcedureStepDescription": "spine_generic", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "T1w", - "ProtocolName": "T1w", - "ScanningSequence": "GR_IR", - "SequenceVariant": "SK_SP_MP", - "ScanOptions": "IR", - "SequenceName": "_tfl3d1_16", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS3D", "DIS2D"], - "SeriesNumber": 2, - "AcquisitionTime": "13:09:22.010000", - "AcquisitionNumber": 1, - "SliceThickness": 1, - "SAR": 0.052402, - "EchoTime": 0.00372, - "RepetitionTime": 2, - "InversionTime": 1, - "FlipAngle": 9, - "PartialFourier": 1, - "BaseResolution": 320, - "ShimSetting": [ - 620, - -7194, - -9127, - 77, - 28, - -20, - -10, - -23 ], - "TxRefAmp": 225.825, - "PhaseResolution": 1, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC1-7;NC1,2", - "PulseSequenceDetails": "%SiemensSeq%_tfl", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 81.25, - "PhaseEncodingSteps": 259, - "AcquisitionMatrixPE": 260, - "ReconMatrixPE": 320, - "ParallelReductionFactorInPlane": 2, - "PixelBandwidth": 150, - "DwellTime": 1.04e-05, - "ImageOrientationPatientDICOM": [ - 0, - 1, - 0, - 0, - 0, - -1 ], - "InPlanePhaseEncodingDirectionDICOM": "ROW", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma_fit", + "InstitutionName": "IUGM", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "Chemin_Queen-Mary_4565_Montreal_District_CA_H3W_1W5", + "DeviceSerialNumber": "167006", + "StationName": "MRC35049", + "BodyPartExamined": "SPINE", + "PatientPosition": "HFS", + "ProcedureStepDescription": "spine_generic", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "T1w", + "ProtocolName": "T1w", + "ScanningSequence": "GR_IR", + "SequenceVariant": "SK_SP_MP", + "ScanOptions": "IR", + "SequenceName": "_tfl3d1_16", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS3D", + "DIS2D" + ], + "SeriesNumber": 2, + "AcquisitionTime": "13:09:22.010000", + "AcquisitionNumber": 1, + "SliceThickness": 1, + "SAR": 0.052402, + "EchoTime": 0.00372, + "RepetitionTime": 2, + "InversionTime": 1, + "FlipAngle": 9, + "PartialFourier": 1, + "BaseResolution": 320, + "ShimSetting": [ + 620, + -7194, + -9127, + 77, + 28, + -20, + -10, + -23 + ], + "TxRefAmp": 225.825, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC1-7;NC1,2", + "PulseSequenceDetails": "%SiemensSeq%_tfl", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 81.25, + "PhaseEncodingSteps": 259, + "AcquisitionMatrixPE": 260, + "ReconMatrixPE": 320, + "ParallelReductionFactorInPlane": 2, + "PixelBandwidth": 150, + "DwellTime": 1.04e-05, + "ImageOrientationPatientDICOM": [ + 0, + 1, + 0, + 0, + 0, + -1 + ], + "InPlanePhaseEncodingDirectionDICOM": "ROW", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-unf06/anat/sub-unf06_space-other_T2star.json b/derivatives/data_preprocessed/sub-unf06/anat/sub-unf06_space-other_T2star.json index a346f77515..6760284562 100644 --- a/derivatives/data_preprocessed/sub-unf06/anat/sub-unf06_space-other_T2star.json +++ b/derivatives/data_preprocessed/sub-unf06/anat/sub-unf06_space-other_T2star.json @@ -73,5 +73,9 @@ "InPlanePhaseEncodingDirectionDICOM": "COL", "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0", - "AcquisitionDuration": 285.0 + "AcquisitionDuration": 285.0, + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-unf06/anat/sub-unf06_space-other_T2w.json b/derivatives/data_preprocessed/sub-unf06/anat/sub-unf06_space-other_T2w.json index 7133866725..bc149a8c19 100644 --- a/derivatives/data_preprocessed/sub-unf06/anat/sub-unf06_space-other_T2w.json +++ b/derivatives/data_preprocessed/sub-unf06/anat/sub-unf06_space-other_T2w.json @@ -1,67 +1,80 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma_fit", - "InstitutionName": "IUGM", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "Chemin_Queen-Mary_4565_Montreal_District_CA_H3W_1W5", - "DeviceSerialNumber": "167006", - "StationName": "MRC35049", - "BodyPartExamined": "SPINE", - "PatientPosition": "HFS", - "ProcedureStepDescription": "spine_generic", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "T2w", - "ProtocolName": "T2w", - "ScanningSequence": "SE", - "SequenceVariant": "SK_SP_OSP", - "ScanOptions": "PFP", - "SequenceName": "_spcR_100", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS3D", "DIS2D"], - "SeriesNumber": 3, - "AcquisitionTime": "13:14:25.070000", - "AcquisitionNumber": 1, - "SliceThickness": 0.8, - "SAR": 0.545599, - "EchoTime": 0.12, - "RepetitionTime": 1.5, - "FlipAngle": 120, - "PartialFourier": 1, - "BaseResolution": 320, - "ShimSetting": [ - 620, - -7194, - -9127, - 77, - 28, - -20, - -10, - -23 ], - "TxRefAmp": 259.025, - "PhaseResolution": 1, - "PhaseOversampling": 0.8, - "ReceiveCoilName": "Spine_32", - "ReceiveCoilActiveElements": "HC3-7;NC1,2;SP1", - "PulseSequenceDetails": "%SiemensSeq%_tse_vfl", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 100, - "EchoTrainLength": 76, - "PhaseEncodingSteps": 422, - "AcquisitionMatrixPE": 320, - "ReconMatrixPE": 320, - "ParallelReductionFactorInPlane": 3, - "PixelBandwidth": 625, - "DwellTime": 2.5e-06, - "ImageOrientationPatientDICOM": [ - 0, - 1, - 4.897e-12, - 0, - 4.897e-12, - -1 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma_fit", + "InstitutionName": "IUGM", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "Chemin_Queen-Mary_4565_Montreal_District_CA_H3W_1W5", + "DeviceSerialNumber": "167006", + "StationName": "MRC35049", + "BodyPartExamined": "SPINE", + "PatientPosition": "HFS", + "ProcedureStepDescription": "spine_generic", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "T2w", + "ProtocolName": "T2w", + "ScanningSequence": "SE", + "SequenceVariant": "SK_SP_OSP", + "ScanOptions": "PFP", + "SequenceName": "_spcR_100", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS3D", + "DIS2D" + ], + "SeriesNumber": 3, + "AcquisitionTime": "13:14:25.070000", + "AcquisitionNumber": 1, + "SliceThickness": 0.8, + "SAR": 0.545599, + "EchoTime": 0.12, + "RepetitionTime": 1.5, + "FlipAngle": 120, + "PartialFourier": 1, + "BaseResolution": 320, + "ShimSetting": [ + 620, + -7194, + -9127, + 77, + 28, + -20, + -10, + -23 + ], + "TxRefAmp": 259.025, + "PhaseResolution": 1, + "PhaseOversampling": 0.8, + "ReceiveCoilName": "Spine_32", + "ReceiveCoilActiveElements": "HC3-7;NC1,2;SP1", + "PulseSequenceDetails": "%SiemensSeq%_tse_vfl", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "EchoTrainLength": 76, + "PhaseEncodingSteps": 422, + "AcquisitionMatrixPE": 320, + "ReconMatrixPE": 320, + "ParallelReductionFactorInPlane": 3, + "PixelBandwidth": 625, + "DwellTime": 2.5e-06, + "ImageOrientationPatientDICOM": [ + 0, + 1, + 4.897e-12, + 0, + 4.897e-12, + -1 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-unf07/anat/sub-unf07_flip-1_mt-on_space-other_MTS.json b/derivatives/data_preprocessed/sub-unf07/anat/sub-unf07_flip-1_mt-on_space-other_MTS.json index dc52411a9a..0e60dbaeb1 100644 --- a/derivatives/data_preprocessed/sub-unf07/anat/sub-unf07_flip-1_mt-on_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-unf07/anat/sub-unf07_flip-1_mt-on_space-other_MTS.json @@ -1,65 +1,76 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma_fit", - "InstitutionName": "IUGM", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "Chemin_Queen-Mary_4565_Montreal_District_CA_H3W_1W5", - "DeviceSerialNumber": "167006", - "StationName": "MRC35049", - "BodyPartExamined": "SPINE", - "PatientPosition": "HFS", - "ProcedureStepDescription": "spine_sct", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-MT1", - "ProtocolName": "GRE-MT1", - "ScanningSequence": "GR", - "SequenceVariant": "MTC_SP", - "ScanOptions": "MT", - "SequenceName": "_fl3d1", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS2D"], - "SeriesNumber": 8, - "AcquisitionTime": "13:51:10.972500", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SAR": 0.639514, - "EchoTime": 0.00313, - "RepetitionTime": 0.035, - "FlipAngle": 9, - "PartialFourier": 1, - "BaseResolution": 256, - "ShimSetting": [ - 579, - -7246, - -9046, - -1357, - -48, - 2284, - -222, - -151 ], - "TxRefAmp": 304.002, - "PhaseResolution": 1, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC5-7;NC1,2", - "PulseSequenceDetails": "%SiemensSeq%_gre", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 100, - "PhaseEncodingSteps": 255, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 256, - "ParallelReductionFactorInPlane": 2, - "PixelBandwidth": 260, - "DwellTime": 7.5e-06, - "ImageOrientationPatientDICOM": [ - 0.998989, - 0.00595285, - -0.0445687, - 1.39377e-08, - 0.991198, - 0.13239 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma_fit", + "InstitutionName": "IUGM", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "Chemin_Queen-Mary_4565_Montreal_District_CA_H3W_1W5", + "DeviceSerialNumber": "167006", + "StationName": "MRC35049", + "BodyPartExamined": "SPINE", + "PatientPosition": "HFS", + "ProcedureStepDescription": "spine_sct", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-MT1", + "ProtocolName": "GRE-MT1", + "ScanningSequence": "GR", + "SequenceVariant": "MTC_SP", + "ScanOptions": "MT", + "SequenceName": "_fl3d1", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS2D" + ], + "SeriesNumber": 8, + "AcquisitionTime": "13:51:10.972500", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SAR": 0.639514, + "EchoTime": 0.00313, + "RepetitionTime": 0.035, + "FlipAngle": 9, + "PartialFourier": 1, + "BaseResolution": 256, + "ShimSetting": [ + 579, + -7246, + -9046, + -1357, + -48, + 2284, + -222, + -151 + ], + "TxRefAmp": 304.002, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC5-7;NC1,2", + "PulseSequenceDetails": "%SiemensSeq%_gre", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 255, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "ParallelReductionFactorInPlane": 2, + "PixelBandwidth": 260, + "DwellTime": 7.5e-06, + "ImageOrientationPatientDICOM": [ + 0.998989, + 0.00595285, + -0.0445687, + 1.39377e-08, + 0.991198, + 0.13239 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-unf07/anat/sub-unf07_flip-2_mt-off_space-other_MTS.json b/derivatives/data_preprocessed/sub-unf07/anat/sub-unf07_flip-2_mt-off_space-other_MTS.json index 2e854fc219..139e866d50 100644 --- a/derivatives/data_preprocessed/sub-unf07/anat/sub-unf07_flip-2_mt-off_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-unf07/anat/sub-unf07_flip-2_mt-off_space-other_MTS.json @@ -1,64 +1,75 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma_fit", - "InstitutionName": "IUGM", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "Chemin_Queen-Mary_4565_Montreal_District_CA_H3W_1W5", - "DeviceSerialNumber": "167006", - "StationName": "MRC35049", - "BodyPartExamined": "SPINE", - "PatientPosition": "HFS", - "ProcedureStepDescription": "spine_sct", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-T1w", - "ProtocolName": "GRE-T1w", - "ScanningSequence": "GR", - "SequenceVariant": "SP", - "SequenceName": "_fl3d1", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS2D"], - "SeriesNumber": 10, - "AcquisitionTime": "13:55:37.215000", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SAR": 0.0414641, - "EchoTime": 0.00313, - "RepetitionTime": 0.015, - "FlipAngle": 15, - "PartialFourier": 1, - "BaseResolution": 256, - "ShimSetting": [ - 579, - -7246, - -9046, - -1357, - -48, - 2284, - -222, - -151 ], - "TxRefAmp": 304.002, - "PhaseResolution": 1, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC5-7;NC1,2", - "PulseSequenceDetails": "%SiemensSeq%_gre", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 100, - "PhaseEncodingSteps": 255, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 256, - "ParallelReductionFactorInPlane": 2, - "PixelBandwidth": 260, - "DwellTime": 7.5e-06, - "ImageOrientationPatientDICOM": [ - 0.998989, - 0.00595285, - -0.0445687, - 1.39377e-08, - 0.991198, - 0.13239 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma_fit", + "InstitutionName": "IUGM", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "Chemin_Queen-Mary_4565_Montreal_District_CA_H3W_1W5", + "DeviceSerialNumber": "167006", + "StationName": "MRC35049", + "BodyPartExamined": "SPINE", + "PatientPosition": "HFS", + "ProcedureStepDescription": "spine_sct", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-T1w", + "ProtocolName": "GRE-T1w", + "ScanningSequence": "GR", + "SequenceVariant": "SP", + "SequenceName": "_fl3d1", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS2D" + ], + "SeriesNumber": 10, + "AcquisitionTime": "13:55:37.215000", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SAR": 0.0414641, + "EchoTime": 0.00313, + "RepetitionTime": 0.015, + "FlipAngle": 15, + "PartialFourier": 1, + "BaseResolution": 256, + "ShimSetting": [ + 579, + -7246, + -9046, + -1357, + -48, + 2284, + -222, + -151 + ], + "TxRefAmp": 304.002, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC5-7;NC1,2", + "PulseSequenceDetails": "%SiemensSeq%_gre", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 255, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "ParallelReductionFactorInPlane": 2, + "PixelBandwidth": 260, + "DwellTime": 7.5e-06, + "ImageOrientationPatientDICOM": [ + 0.998989, + 0.00595285, + -0.0445687, + 1.39377e-08, + 0.991198, + 0.13239 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-unf07/anat/sub-unf07_space-other_T1w.json b/derivatives/data_preprocessed/sub-unf07/anat/sub-unf07_space-other_T1w.json index 0a2dae222c..5fe0e7104a 100644 --- a/derivatives/data_preprocessed/sub-unf07/anat/sub-unf07_space-other_T1w.json +++ b/derivatives/data_preprocessed/sub-unf07/anat/sub-unf07_space-other_T1w.json @@ -1,66 +1,79 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma_fit", - "InstitutionName": "IUGM", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "Chemin_Queen-Mary_4565_Montreal_District_CA_H3W_1W5", - "DeviceSerialNumber": "167006", - "StationName": "MRC35049", - "BodyPartExamined": "SPINE", - "PatientPosition": "HFS", - "ProcedureStepDescription": "spine_sct", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "T1w", - "ProtocolName": "T1w", - "ScanningSequence": "GR_IR", - "SequenceVariant": "SK_SP_MP", - "ScanOptions": "IR", - "SequenceName": "_tfl3d1_16", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS3D", "DIS2D"], - "SeriesNumber": 4, - "AcquisitionTime": "13:33:57.052500", - "AcquisitionNumber": 1, - "SliceThickness": 1, - "SAR": 0.0684302, - "EchoTime": 0.00372, - "RepetitionTime": 2, - "InversionTime": 1, - "FlipAngle": 9, - "PartialFourier": 1, - "BaseResolution": 320, - "ShimSetting": [ - 597, - -7268, - -8995, - -84, - -29, - -181, - 60, - -27 ], - "TxRefAmp": 275.466, - "PhaseResolution": 1, - "ReceiveCoilName": "HeadNeck_64", - "ReceiveCoilActiveElements": "HC1-7;NC1,2", - "PulseSequenceDetails": "%SiemensSeq%_tfl", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 81.25, - "PhaseEncodingSteps": 259, - "AcquisitionMatrixPE": 260, - "ReconMatrixPE": 320, - "ParallelReductionFactorInPlane": 2, - "PixelBandwidth": 150, - "DwellTime": 1.04e-05, - "ImageOrientationPatientDICOM": [ - 0, - 1, - 0, - 0, - 0, - -1 ], - "InPlanePhaseEncodingDirectionDICOM": "ROW", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma_fit", + "InstitutionName": "IUGM", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "Chemin_Queen-Mary_4565_Montreal_District_CA_H3W_1W5", + "DeviceSerialNumber": "167006", + "StationName": "MRC35049", + "BodyPartExamined": "SPINE", + "PatientPosition": "HFS", + "ProcedureStepDescription": "spine_sct", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "T1w", + "ProtocolName": "T1w", + "ScanningSequence": "GR_IR", + "SequenceVariant": "SK_SP_MP", + "ScanOptions": "IR", + "SequenceName": "_tfl3d1_16", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS3D", + "DIS2D" + ], + "SeriesNumber": 4, + "AcquisitionTime": "13:33:57.052500", + "AcquisitionNumber": 1, + "SliceThickness": 1, + "SAR": 0.0684302, + "EchoTime": 0.00372, + "RepetitionTime": 2, + "InversionTime": 1, + "FlipAngle": 9, + "PartialFourier": 1, + "BaseResolution": 320, + "ShimSetting": [ + 597, + -7268, + -8995, + -84, + -29, + -181, + 60, + -27 + ], + "TxRefAmp": 275.466, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC1-7;NC1,2", + "PulseSequenceDetails": "%SiemensSeq%_tfl", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 81.25, + "PhaseEncodingSteps": 259, + "AcquisitionMatrixPE": 260, + "ReconMatrixPE": 320, + "ParallelReductionFactorInPlane": 2, + "PixelBandwidth": 150, + "DwellTime": 1.04e-05, + "ImageOrientationPatientDICOM": [ + 0, + 1, + 0, + 0, + 0, + -1 + ], + "InPlanePhaseEncodingDirectionDICOM": "ROW", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-unf07/anat/sub-unf07_space-other_T2star.json b/derivatives/data_preprocessed/sub-unf07/anat/sub-unf07_space-other_T2star.json index 9761e4bfdb..de54e148a5 100644 --- a/derivatives/data_preprocessed/sub-unf07/anat/sub-unf07_space-other_T2star.json +++ b/derivatives/data_preprocessed/sub-unf07/anat/sub-unf07_space-other_T2star.json @@ -73,5 +73,9 @@ "InPlanePhaseEncodingDirectionDICOM": "COL", "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0", - "AcquisitionDuration": 285.0 + "AcquisitionDuration": 285.0, + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-unf07/anat/sub-unf07_space-other_T2w.json b/derivatives/data_preprocessed/sub-unf07/anat/sub-unf07_space-other_T2w.json index e6bcd84234..d8a2f82cf5 100644 --- a/derivatives/data_preprocessed/sub-unf07/anat/sub-unf07_space-other_T2w.json +++ b/derivatives/data_preprocessed/sub-unf07/anat/sub-unf07_space-other_T2w.json @@ -1,67 +1,80 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma_fit", - "InstitutionName": "IUGM", - "InstitutionalDepartmentName": "Department", - "InstitutionAddress": "Chemin_Queen-Mary_4565_Montreal_District_CA_H3W_1W5", - "DeviceSerialNumber": "167006", - "StationName": "MRC35049", - "BodyPartExamined": "SPINE", - "PatientPosition": "HFS", - "ProcedureStepDescription": "spine_sct", - "SoftwareVersions": "syngo_MR_E11", - "MRAcquisitionType": "3D", - "SeriesDescription": "T2w", - "ProtocolName": "T2w", - "ScanningSequence": "SE", - "SequenceVariant": "SK_SP_OSP", - "ScanOptions": "PFP", - "SequenceName": "_spcR_100", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS3D", "DIS2D"], - "SeriesNumber": 5, - "AcquisitionTime": "13:39:32.007500", - "AcquisitionNumber": 1, - "SliceThickness": 0.8, - "SAR": 0.587649, - "EchoTime": 0.12, - "RepetitionTime": 1.5, - "FlipAngle": 120, - "PartialFourier": 1, - "BaseResolution": 320, - "ShimSetting": [ - 621, - -7290, - -9181, - -624, - 48, - -142, - 661, - 10 ], - "TxRefAmp": 290.43, - "PhaseResolution": 1, - "PhaseOversampling": 0.8, - "ReceiveCoilName": "Spine_32", - "ReceiveCoilActiveElements": "HC5-7;NC1,2;SP1", - "PulseSequenceDetails": "%SiemensSeq%_tse_vfl", - "ConsistencyInfo": "N4_VE11C_LATEST_20160120", - "PercentPhaseFOV": 100, - "EchoTrainLength": 76, - "PhaseEncodingSteps": 422, - "AcquisitionMatrixPE": 320, - "ReconMatrixPE": 320, - "ParallelReductionFactorInPlane": 3, - "PixelBandwidth": 625, - "DwellTime": 2.5e-06, - "ImageOrientationPatientDICOM": [ - 0, - 1, - 4.897e-12, - 0, - 4.897e-12, - -1 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma_fit", + "InstitutionName": "IUGM", + "InstitutionalDepartmentName": "Department", + "InstitutionAddress": "Chemin_Queen-Mary_4565_Montreal_District_CA_H3W_1W5", + "DeviceSerialNumber": "167006", + "StationName": "MRC35049", + "BodyPartExamined": "SPINE", + "PatientPosition": "HFS", + "ProcedureStepDescription": "spine_sct", + "SoftwareVersions": "syngo_MR_E11", + "MRAcquisitionType": "3D", + "SeriesDescription": "T2w", + "ProtocolName": "T2w", + "ScanningSequence": "SE", + "SequenceVariant": "SK_SP_OSP", + "ScanOptions": "PFP", + "SequenceName": "_spcR_100", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS3D", + "DIS2D" + ], + "SeriesNumber": 5, + "AcquisitionTime": "13:39:32.007500", + "AcquisitionNumber": 1, + "SliceThickness": 0.8, + "SAR": 0.587649, + "EchoTime": 0.12, + "RepetitionTime": 1.5, + "FlipAngle": 120, + "PartialFourier": 1, + "BaseResolution": 320, + "ShimSetting": [ + 621, + -7290, + -9181, + -624, + 48, + -142, + 661, + 10 + ], + "TxRefAmp": 290.43, + "PhaseResolution": 1, + "PhaseOversampling": 0.8, + "ReceiveCoilName": "Spine_32", + "ReceiveCoilActiveElements": "HC5-7;NC1,2;SP1", + "PulseSequenceDetails": "%SiemensSeq%_tse_vfl", + "ConsistencyInfo": "N4_VE11C_LATEST_20160120", + "PercentPhaseFOV": 100, + "EchoTrainLength": 76, + "PhaseEncodingSteps": 422, + "AcquisitionMatrixPE": 320, + "ReconMatrixPE": 320, + "ParallelReductionFactorInPlane": 3, + "PixelBandwidth": 625, + "DwellTime": 2.5e-06, + "ImageOrientationPatientDICOM": [ + 0, + 1, + 4.897e-12, + 0, + 4.897e-12, + -1 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-vallHebron01/anat/sub-vallHebron01_flip-1_mt-on_space-other_MTS.json b/derivatives/data_preprocessed/sub-vallHebron01/anat/sub-vallHebron01_flip-1_mt-on_space-other_MTS.json index 3c5388e02f..8d86f67a52 100644 --- a/derivatives/data_preprocessed/sub-vallHebron01/anat/sub-vallHebron01_flip-1_mt-on_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-vallHebron01/anat/sub-vallHebron01_flip-1_mt-on_space-other_MTS.json @@ -1,59 +1,69 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Siemens", - "ManufacturersModelName": "TrioTim", - "DeviceSerialNumber": "35388", - "StationName": "MRC35388", - "PatientPosition": "HFS", - "ProcedureStepDescription": "RM_CEREBRAL", - "SoftwareVersions": "syngo_MR_B17", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-MT1", - "ProtocolName": "GRE-MT1", - "ScanningSequence": "GR", - "SequenceVariant": "MTC_SP", - "ScanOptions": "MT", - "SequenceName": "_fl3d1", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "DIS2D"], - "SeriesNumber": 16, - "AcquisitionTime": "17:59:43.782500", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SAR": 1.18569, - "EchoTime": 0.0035, - "RepetitionTime": 0.035, - "FlipAngle": 9, - "PartialFourier": 1, - "BaseResolution": 256, - "ShimSetting": [ - 8723, - -1422, - -7749, - -741, - 1056, - 632, - 447, - -652 ], - "TxRefAmp": 322.946, - "PhaseResolution": 1, - "ReceiveCoilName": "NeckMatrix", - "PulseSequenceDetails": "%SiemensSeq%_gre", - "PercentPhaseFOV": 100, - "PhaseEncodingSteps": 255, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 256, - "ParallelReductionFactorInPlane": 2, - "PixelBandwidth": 260, - "DwellTime": 7.5e-06, - "ImageOrientationPatientDICOM": [ - 0.999781, - -0.00331099, - 0.0206742, - 4.46227e-08, - 0.987418, - 0.158133 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Siemens", + "ManufacturersModelName": "TrioTim", + "DeviceSerialNumber": "35388", + "StationName": "MRC35388", + "PatientPosition": "HFS", + "ProcedureStepDescription": "RM_CEREBRAL", + "SoftwareVersions": "syngo_MR_B17", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-MT1", + "ProtocolName": "GRE-MT1", + "ScanningSequence": "GR", + "SequenceVariant": "MTC_SP", + "ScanOptions": "MT", + "SequenceName": "_fl3d1", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "DIS2D" + ], + "SeriesNumber": 16, + "AcquisitionTime": "17:59:43.782500", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SAR": 1.18569, + "EchoTime": 0.0035, + "RepetitionTime": 0.035, + "FlipAngle": 9, + "PartialFourier": 1, + "BaseResolution": 256, + "ShimSetting": [ + 8723, + -1422, + -7749, + -741, + 1056, + 632, + 447, + -652 + ], + "TxRefAmp": 322.946, + "PhaseResolution": 1, + "ReceiveCoilName": "NeckMatrix", + "PulseSequenceDetails": "%SiemensSeq%_gre", + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 255, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "ParallelReductionFactorInPlane": 2, + "PixelBandwidth": 260, + "DwellTime": 7.5e-06, + "ImageOrientationPatientDICOM": [ + 0.999781, + -0.00331099, + 0.0206742, + 4.46227e-08, + 0.987418, + 0.158133 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-vallHebron01/anat/sub-vallHebron01_flip-2_mt-off_space-other_MTS.json b/derivatives/data_preprocessed/sub-vallHebron01/anat/sub-vallHebron01_flip-2_mt-off_space-other_MTS.json index 22551fde41..4f625f4ab6 100644 --- a/derivatives/data_preprocessed/sub-vallHebron01/anat/sub-vallHebron01_flip-2_mt-off_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-vallHebron01/anat/sub-vallHebron01_flip-2_mt-off_space-other_MTS.json @@ -1,58 +1,68 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Siemens", - "ManufacturersModelName": "TrioTim", - "DeviceSerialNumber": "35388", - "StationName": "MRC35388", - "PatientPosition": "HFS", - "ProcedureStepDescription": "RM_CEREBRAL", - "SoftwareVersions": "syngo_MR_B17", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-T1w", - "ProtocolName": "GRE-T1w", - "ScanningSequence": "GR", - "SequenceVariant": "SP", - "SequenceName": "_fl3d1", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "DIS2D"], - "SeriesNumber": 18, - "AcquisitionTime": "18:04:18.240000", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SAR": 0.0768765, - "EchoTime": 0.0035, - "RepetitionTime": 0.015, - "FlipAngle": 15, - "PartialFourier": 1, - "BaseResolution": 256, - "ShimSetting": [ - 8717, - -1393, - -7764, - -843, - 1026, - 1554, - 321, - -479 ], - "TxRefAmp": 322.946, - "PhaseResolution": 1, - "ReceiveCoilName": "NeckMatrix", - "PulseSequenceDetails": "%SiemensSeq%_gre", - "PercentPhaseFOV": 100, - "PhaseEncodingSteps": 255, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 256, - "ParallelReductionFactorInPlane": 2, - "PixelBandwidth": 260, - "DwellTime": 7.5e-06, - "ImageOrientationPatientDICOM": [ - 0.999781, - -0.00331099, - 0.0206742, - 4.46227e-08, - 0.987418, - 0.158133 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Siemens", + "ManufacturersModelName": "TrioTim", + "DeviceSerialNumber": "35388", + "StationName": "MRC35388", + "PatientPosition": "HFS", + "ProcedureStepDescription": "RM_CEREBRAL", + "SoftwareVersions": "syngo_MR_B17", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-T1w", + "ProtocolName": "GRE-T1w", + "ScanningSequence": "GR", + "SequenceVariant": "SP", + "SequenceName": "_fl3d1", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "DIS2D" + ], + "SeriesNumber": 18, + "AcquisitionTime": "18:04:18.240000", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SAR": 0.0768765, + "EchoTime": 0.0035, + "RepetitionTime": 0.015, + "FlipAngle": 15, + "PartialFourier": 1, + "BaseResolution": 256, + "ShimSetting": [ + 8717, + -1393, + -7764, + -843, + 1026, + 1554, + 321, + -479 + ], + "TxRefAmp": 322.946, + "PhaseResolution": 1, + "ReceiveCoilName": "NeckMatrix", + "PulseSequenceDetails": "%SiemensSeq%_gre", + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 255, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "ParallelReductionFactorInPlane": 2, + "PixelBandwidth": 260, + "DwellTime": 7.5e-06, + "ImageOrientationPatientDICOM": [ + 0.999781, + -0.00331099, + 0.0206742, + 4.46227e-08, + 0.987418, + 0.158133 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-vallHebron01/anat/sub-vallHebron01_space-other_T1w.json b/derivatives/data_preprocessed/sub-vallHebron01/anat/sub-vallHebron01_space-other_T1w.json index d4ade2d135..c5d87a478e 100644 --- a/derivatives/data_preprocessed/sub-vallHebron01/anat/sub-vallHebron01_space-other_T1w.json +++ b/derivatives/data_preprocessed/sub-vallHebron01/anat/sub-vallHebron01_space-other_T1w.json @@ -1,60 +1,72 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Siemens", - "ManufacturersModelName": "TrioTim", - "DeviceSerialNumber": "35388", - "StationName": "MRC35388", - "PatientPosition": "HFS", - "ProcedureStepDescription": "RM_CEREBRAL", - "SoftwareVersions": "syngo_MR_B17", - "MRAcquisitionType": "3D", - "SeriesDescription": "T1w", - "ProtocolName": "T1w", - "ScanningSequence": "GR_IR", - "SequenceVariant": "SP_MP", - "ScanOptions": "IR", - "SequenceName": "_tfl3d1", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS2D"], - "SeriesNumber": 12, - "AcquisitionTime": "17:38:13.987500", - "AcquisitionNumber": 1, - "SliceThickness": 1, - "SAR": 0.105861, - "EchoTime": 0.00321, - "RepetitionTime": 2, - "InversionTime": 1, - "FlipAngle": 9, - "PartialFourier": 1, - "BaseResolution": 320, - "ShimSetting": [ - 8654, - -1241, - -7689, - -152, - 910, - -209, - 371, - -503 ], - "TxRefAmp": 289.064, - "PhaseResolution": 1, - "ReceiveCoilName": "NeckMatrix", - "PulseSequenceDetails": "%SiemensSeq%_tfl", - "PercentPhaseFOV": 81.25, - "PhaseEncodingSteps": 259, - "AcquisitionMatrixPE": 260, - "ReconMatrixPE": 320, - "ParallelReductionFactorInPlane": 2, - "PixelBandwidth": 150, - "DwellTime": 1.04e-05, - "ImageOrientationPatientDICOM": [ - 0.00529155, - 0.999986, - -0.000348833, - 0.0380211, - -0.00054978, - -0.999277 ], - "InPlanePhaseEncodingDirectionDICOM": "ROW", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Siemens", + "ManufacturersModelName": "TrioTim", + "DeviceSerialNumber": "35388", + "StationName": "MRC35388", + "PatientPosition": "HFS", + "ProcedureStepDescription": "RM_CEREBRAL", + "SoftwareVersions": "syngo_MR_B17", + "MRAcquisitionType": "3D", + "SeriesDescription": "T1w", + "ProtocolName": "T1w", + "ScanningSequence": "GR_IR", + "SequenceVariant": "SP_MP", + "ScanOptions": "IR", + "SequenceName": "_tfl3d1", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS2D" + ], + "SeriesNumber": 12, + "AcquisitionTime": "17:38:13.987500", + "AcquisitionNumber": 1, + "SliceThickness": 1, + "SAR": 0.105861, + "EchoTime": 0.00321, + "RepetitionTime": 2, + "InversionTime": 1, + "FlipAngle": 9, + "PartialFourier": 1, + "BaseResolution": 320, + "ShimSetting": [ + 8654, + -1241, + -7689, + -152, + 910, + -209, + 371, + -503 + ], + "TxRefAmp": 289.064, + "PhaseResolution": 1, + "ReceiveCoilName": "NeckMatrix", + "PulseSequenceDetails": "%SiemensSeq%_tfl", + "PercentPhaseFOV": 81.25, + "PhaseEncodingSteps": 259, + "AcquisitionMatrixPE": 260, + "ReconMatrixPE": 320, + "ParallelReductionFactorInPlane": 2, + "PixelBandwidth": 150, + "DwellTime": 1.04e-05, + "ImageOrientationPatientDICOM": [ + 0.00529155, + 0.999986, + -0.000348833, + 0.0380211, + -0.00054978, + -0.999277 + ], + "InPlanePhaseEncodingDirectionDICOM": "ROW", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-vallHebron01/anat/sub-vallHebron01_space-other_T2star.json b/derivatives/data_preprocessed/sub-vallHebron01/anat/sub-vallHebron01_space-other_T2star.json index 4cdb3c3cdb..a6a2f59c02 100644 --- a/derivatives/data_preprocessed/sub-vallHebron01/anat/sub-vallHebron01_space-other_T2star.json +++ b/derivatives/data_preprocessed/sub-vallHebron01/anat/sub-vallHebron01_space-other_T2star.json @@ -64,5 +64,9 @@ "InPlanePhaseEncodingDirectionDICOM": "COL", "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0", - "AcquisitionDuration": 290.0 + "AcquisitionDuration": 290.0, + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-vallHebron01/anat/sub-vallHebron01_space-other_T2w.json b/derivatives/data_preprocessed/sub-vallHebron01/anat/sub-vallHebron01_space-other_T2w.json index 8a43df9f6b..ea8f04b198 100644 --- a/derivatives/data_preprocessed/sub-vallHebron01/anat/sub-vallHebron01_space-other_T2w.json +++ b/derivatives/data_preprocessed/sub-vallHebron01/anat/sub-vallHebron01_space-other_T2w.json @@ -1,60 +1,72 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Siemens", - "ManufacturersModelName": "TrioTim", - "DeviceSerialNumber": "35388", - "StationName": "MRC35388", - "PatientPosition": "HFS", - "ProcedureStepDescription": "RM_CEREBRAL", - "SoftwareVersions": "syngo_MR_B17", - "MRAcquisitionType": "3D", - "SeriesDescription": "T2w", - "ProtocolName": "T2w", - "ScanningSequence": "SE", - "SequenceVariant": "SK_SP", - "ScanOptions": "PFP", - "SequenceName": "_spcR3d1_87", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS2D"], - "SeriesNumber": 13, - "AcquisitionTime": "17:44:27.780000", - "AcquisitionNumber": 1, - "SliceThickness": 0.8, - "SAR": 1.18858, - "EchoTime": 0.118, - "RepetitionTime": 2, - "FlipAngle": 170, - "PartialFourier": 1, - "BaseResolution": 320, - "ShimSetting": [ - 8686, - -1155, - -7953, - 133, - 836, - -44, - -41, - -387 ], - "TxRefAmp": 320.806, - "PhaseResolution": 1.0125, - "ReceiveCoilName": "NeckMatrix", - "PulseSequenceDetails": "%SiemensSeq%_tse_vfl", - "PercentPhaseFOV": 100, - "EchoTrainLength": 87, - "PhaseEncodingSteps": 247, - "AcquisitionMatrixPE": 324, - "ReconMatrixPE": 320, - "ParallelReductionFactorInPlane": 2, - "PixelBandwidth": 625, - "DwellTime": 2.5e-06, - "ImageOrientationPatientDICOM": [ - 0.00529155, - 0.999986, - -0.000348833, - 0.0380211, - -0.00054978, - -0.999277 ], - "InPlanePhaseEncodingDirectionDICOM": "ROW", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Siemens", + "ManufacturersModelName": "TrioTim", + "DeviceSerialNumber": "35388", + "StationName": "MRC35388", + "PatientPosition": "HFS", + "ProcedureStepDescription": "RM_CEREBRAL", + "SoftwareVersions": "syngo_MR_B17", + "MRAcquisitionType": "3D", + "SeriesDescription": "T2w", + "ProtocolName": "T2w", + "ScanningSequence": "SE", + "SequenceVariant": "SK_SP", + "ScanOptions": "PFP", + "SequenceName": "_spcR3d1_87", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS2D" + ], + "SeriesNumber": 13, + "AcquisitionTime": "17:44:27.780000", + "AcquisitionNumber": 1, + "SliceThickness": 0.8, + "SAR": 1.18858, + "EchoTime": 0.118, + "RepetitionTime": 2, + "FlipAngle": 170, + "PartialFourier": 1, + "BaseResolution": 320, + "ShimSetting": [ + 8686, + -1155, + -7953, + 133, + 836, + -44, + -41, + -387 + ], + "TxRefAmp": 320.806, + "PhaseResolution": 1.0125, + "ReceiveCoilName": "NeckMatrix", + "PulseSequenceDetails": "%SiemensSeq%_tse_vfl", + "PercentPhaseFOV": 100, + "EchoTrainLength": 87, + "PhaseEncodingSteps": 247, + "AcquisitionMatrixPE": 324, + "ReconMatrixPE": 320, + "ParallelReductionFactorInPlane": 2, + "PixelBandwidth": 625, + "DwellTime": 2.5e-06, + "ImageOrientationPatientDICOM": [ + 0.00529155, + 0.999986, + -0.000348833, + 0.0380211, + -0.00054978, + -0.999277 + ], + "InPlanePhaseEncodingDirectionDICOM": "ROW", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-vallHebron02/anat/sub-vallHebron02_flip-1_mt-on_space-other_MTS.json b/derivatives/data_preprocessed/sub-vallHebron02/anat/sub-vallHebron02_flip-1_mt-on_space-other_MTS.json index 0a0413f768..8022600611 100644 --- a/derivatives/data_preprocessed/sub-vallHebron02/anat/sub-vallHebron02_flip-1_mt-on_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-vallHebron02/anat/sub-vallHebron02_flip-1_mt-on_space-other_MTS.json @@ -1,59 +1,69 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Siemens", - "ManufacturersModelName": "TrioTim", - "DeviceSerialNumber": "35388", - "StationName": "MRC35388", - "PatientPosition": "HFS", - "ProcedureStepDescription": "RM_CEREBRAL", - "SoftwareVersions": "syngo_MR_B17", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-MT1", - "ProtocolName": "GRE-MT1", - "ScanningSequence": "GR", - "SequenceVariant": "MTC_SP", - "ScanOptions": "MT", - "SequenceName": "_fl3d1", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "DIS2D"], - "SeriesNumber": 16, - "AcquisitionTime": "19:20:0.752500", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SAR": 0.834703, - "EchoTime": 0.0035, - "RepetitionTime": 0.035, - "FlipAngle": 9, - "PartialFourier": 1, - "BaseResolution": 256, - "ShimSetting": [ - 8686, - -1348, - -7787, - -312, - 902, - 1582, - 48, - -453 ], - "TxRefAmp": 306.945, - "PhaseResolution": 1, - "ReceiveCoilName": "NeckMatrix", - "PulseSequenceDetails": "%SiemensSeq%_gre", - "PercentPhaseFOV": 100, - "PhaseEncodingSteps": 255, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 256, - "ParallelReductionFactorInPlane": 2, - "PixelBandwidth": 260, - "DwellTime": 7.5e-06, - "ImageOrientationPatientDICOM": [ - 0.99889, - 0.00685713, - -0.0465978, - 2.23512e-08, - 0.989345, - 0.145588 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Siemens", + "ManufacturersModelName": "TrioTim", + "DeviceSerialNumber": "35388", + "StationName": "MRC35388", + "PatientPosition": "HFS", + "ProcedureStepDescription": "RM_CEREBRAL", + "SoftwareVersions": "syngo_MR_B17", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-MT1", + "ProtocolName": "GRE-MT1", + "ScanningSequence": "GR", + "SequenceVariant": "MTC_SP", + "ScanOptions": "MT", + "SequenceName": "_fl3d1", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "DIS2D" + ], + "SeriesNumber": 16, + "AcquisitionTime": "19:20:0.752500", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SAR": 0.834703, + "EchoTime": 0.0035, + "RepetitionTime": 0.035, + "FlipAngle": 9, + "PartialFourier": 1, + "BaseResolution": 256, + "ShimSetting": [ + 8686, + -1348, + -7787, + -312, + 902, + 1582, + 48, + -453 + ], + "TxRefAmp": 306.945, + "PhaseResolution": 1, + "ReceiveCoilName": "NeckMatrix", + "PulseSequenceDetails": "%SiemensSeq%_gre", + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 255, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "ParallelReductionFactorInPlane": 2, + "PixelBandwidth": 260, + "DwellTime": 7.5e-06, + "ImageOrientationPatientDICOM": [ + 0.99889, + 0.00685713, + -0.0465978, + 2.23512e-08, + 0.989345, + 0.145588 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-vallHebron02/anat/sub-vallHebron02_flip-2_mt-off_space-other_MTS.json b/derivatives/data_preprocessed/sub-vallHebron02/anat/sub-vallHebron02_flip-2_mt-off_space-other_MTS.json index 32d9a9d70d..4b317ba798 100644 --- a/derivatives/data_preprocessed/sub-vallHebron02/anat/sub-vallHebron02_flip-2_mt-off_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-vallHebron02/anat/sub-vallHebron02_flip-2_mt-off_space-other_MTS.json @@ -1,58 +1,68 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Siemens", - "ManufacturersModelName": "TrioTim", - "DeviceSerialNumber": "35388", - "StationName": "MRC35388", - "PatientPosition": "HFS", - "ProcedureStepDescription": "RM_CEREBRAL", - "SoftwareVersions": "syngo_MR_B17", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-T1w", - "ProtocolName": "GRE-T1w", - "ScanningSequence": "GR", - "SequenceVariant": "SP", - "SequenceName": "_fl3d1", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "DIS2D"], - "SeriesNumber": 18, - "AcquisitionTime": "19:24:36.400000", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SAR": 0.0541196, - "EchoTime": 0.0035, - "RepetitionTime": 0.015, - "FlipAngle": 15, - "PartialFourier": 1, - "BaseResolution": 256, - "ShimSetting": [ - 8698, - -1219, - -7794, - -283, - 759, - 2063, - -382, - -344 ], - "TxRefAmp": 306.945, - "PhaseResolution": 1, - "ReceiveCoilName": "NeckMatrix", - "PulseSequenceDetails": "%SiemensSeq%_gre", - "PercentPhaseFOV": 100, - "PhaseEncodingSteps": 255, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 256, - "ParallelReductionFactorInPlane": 2, - "PixelBandwidth": 260, - "DwellTime": 7.5e-06, - "ImageOrientationPatientDICOM": [ - 0.99889, - 0.00685713, - -0.0465978, - 2.23512e-08, - 0.989345, - 0.145588 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Siemens", + "ManufacturersModelName": "TrioTim", + "DeviceSerialNumber": "35388", + "StationName": "MRC35388", + "PatientPosition": "HFS", + "ProcedureStepDescription": "RM_CEREBRAL", + "SoftwareVersions": "syngo_MR_B17", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-T1w", + "ProtocolName": "GRE-T1w", + "ScanningSequence": "GR", + "SequenceVariant": "SP", + "SequenceName": "_fl3d1", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "DIS2D" + ], + "SeriesNumber": 18, + "AcquisitionTime": "19:24:36.400000", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SAR": 0.0541196, + "EchoTime": 0.0035, + "RepetitionTime": 0.015, + "FlipAngle": 15, + "PartialFourier": 1, + "BaseResolution": 256, + "ShimSetting": [ + 8698, + -1219, + -7794, + -283, + 759, + 2063, + -382, + -344 + ], + "TxRefAmp": 306.945, + "PhaseResolution": 1, + "ReceiveCoilName": "NeckMatrix", + "PulseSequenceDetails": "%SiemensSeq%_gre", + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 255, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "ParallelReductionFactorInPlane": 2, + "PixelBandwidth": 260, + "DwellTime": 7.5e-06, + "ImageOrientationPatientDICOM": [ + 0.99889, + 0.00685713, + -0.0465978, + 2.23512e-08, + 0.989345, + 0.145588 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-vallHebron02/anat/sub-vallHebron02_space-other_T1w.json b/derivatives/data_preprocessed/sub-vallHebron02/anat/sub-vallHebron02_space-other_T1w.json index 12053c6a85..18e4650f1d 100644 --- a/derivatives/data_preprocessed/sub-vallHebron02/anat/sub-vallHebron02_space-other_T1w.json +++ b/derivatives/data_preprocessed/sub-vallHebron02/anat/sub-vallHebron02_space-other_T1w.json @@ -1,60 +1,72 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Siemens", - "ManufacturersModelName": "TrioTim", - "DeviceSerialNumber": "35388", - "StationName": "MRC35388", - "PatientPosition": "HFS", - "ProcedureStepDescription": "RM_CEREBRAL", - "SoftwareVersions": "syngo_MR_B17", - "MRAcquisitionType": "3D", - "SeriesDescription": "T1w", - "ProtocolName": "T1w", - "ScanningSequence": "GR_IR", - "SequenceVariant": "SP_MP", - "ScanOptions": "IR", - "SequenceName": "_tfl3d1", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS2D"], - "SeriesNumber": 12, - "AcquisitionTime": "19:01:58.995000", - "AcquisitionNumber": 1, - "SliceThickness": 1, - "SAR": 0.0876901, - "EchoTime": 0.00321, - "RepetitionTime": 2, - "InversionTime": 1, - "FlipAngle": 9, - "PartialFourier": 1, - "BaseResolution": 320, - "ShimSetting": [ - 8657, - -1318, - -7724, - 21, - 783, - 144, - 0, - -283 ], - "TxRefAmp": 294.959, - "PhaseResolution": 1, - "ReceiveCoilName": "NeckMatrix", - "PulseSequenceDetails": "%SiemensSeq%_tfl", - "PercentPhaseFOV": 81.25, - "PhaseEncodingSteps": 259, - "AcquisitionMatrixPE": 260, - "ReconMatrixPE": 320, - "ParallelReductionFactorInPlane": 2, - "PixelBandwidth": 150, - "DwellTime": 1.04e-05, - "ImageOrientationPatientDICOM": [ - 0, - 1, - -0.000349045, - 0, - -0.000349045, - -1 ], - "InPlanePhaseEncodingDirectionDICOM": "ROW", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Siemens", + "ManufacturersModelName": "TrioTim", + "DeviceSerialNumber": "35388", + "StationName": "MRC35388", + "PatientPosition": "HFS", + "ProcedureStepDescription": "RM_CEREBRAL", + "SoftwareVersions": "syngo_MR_B17", + "MRAcquisitionType": "3D", + "SeriesDescription": "T1w", + "ProtocolName": "T1w", + "ScanningSequence": "GR_IR", + "SequenceVariant": "SP_MP", + "ScanOptions": "IR", + "SequenceName": "_tfl3d1", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS2D" + ], + "SeriesNumber": 12, + "AcquisitionTime": "19:01:58.995000", + "AcquisitionNumber": 1, + "SliceThickness": 1, + "SAR": 0.0876901, + "EchoTime": 0.00321, + "RepetitionTime": 2, + "InversionTime": 1, + "FlipAngle": 9, + "PartialFourier": 1, + "BaseResolution": 320, + "ShimSetting": [ + 8657, + -1318, + -7724, + 21, + 783, + 144, + 0, + -283 + ], + "TxRefAmp": 294.959, + "PhaseResolution": 1, + "ReceiveCoilName": "NeckMatrix", + "PulseSequenceDetails": "%SiemensSeq%_tfl", + "PercentPhaseFOV": 81.25, + "PhaseEncodingSteps": 259, + "AcquisitionMatrixPE": 260, + "ReconMatrixPE": 320, + "ParallelReductionFactorInPlane": 2, + "PixelBandwidth": 150, + "DwellTime": 1.04e-05, + "ImageOrientationPatientDICOM": [ + 0, + 1, + -0.000349045, + 0, + -0.000349045, + -1 + ], + "InPlanePhaseEncodingDirectionDICOM": "ROW", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-vallHebron02/anat/sub-vallHebron02_space-other_T2star.json b/derivatives/data_preprocessed/sub-vallHebron02/anat/sub-vallHebron02_space-other_T2star.json index 7402229481..51c7166ba2 100644 --- a/derivatives/data_preprocessed/sub-vallHebron02/anat/sub-vallHebron02_space-other_T2star.json +++ b/derivatives/data_preprocessed/sub-vallHebron02/anat/sub-vallHebron02_space-other_T2star.json @@ -64,5 +64,9 @@ "InPlanePhaseEncodingDirectionDICOM": "COL", "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0", - "AcquisitionDuration": 290.0 + "AcquisitionDuration": 290.0, + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-vallHebron02/anat/sub-vallHebron02_space-other_T2w.json b/derivatives/data_preprocessed/sub-vallHebron02/anat/sub-vallHebron02_space-other_T2w.json index 4d1de8930d..bd3a44ff9b 100644 --- a/derivatives/data_preprocessed/sub-vallHebron02/anat/sub-vallHebron02_space-other_T2w.json +++ b/derivatives/data_preprocessed/sub-vallHebron02/anat/sub-vallHebron02_space-other_T2w.json @@ -1,60 +1,72 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Siemens", - "ManufacturersModelName": "TrioTim", - "DeviceSerialNumber": "35388", - "StationName": "MRC35388", - "PatientPosition": "HFS", - "ProcedureStepDescription": "RM_CEREBRAL", - "SoftwareVersions": "syngo_MR_B17", - "MRAcquisitionType": "3D", - "SeriesDescription": "T2w", - "ProtocolName": "T2w", - "ScanningSequence": "SE", - "SequenceVariant": "SK_SP", - "ScanOptions": "PFP", - "SequenceName": "_spcR3d1_87", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS2D"], - "SeriesNumber": 13, - "AcquisitionTime": "19:07:9.250000", - "AcquisitionNumber": 1, - "SliceThickness": 0.8, - "SAR": 1.16019, - "EchoTime": 0.118, - "RepetitionTime": 2, - "FlipAngle": 180, - "PartialFourier": 1, - "BaseResolution": 320, - "ShimSetting": [ - 8686, - -1155, - -7953, - 133, - 836, - -44, - -41, - -387 ], - "TxRefAmp": 325.481, - "PhaseResolution": 1.0125, - "ReceiveCoilName": "NeckMatrix", - "PulseSequenceDetails": "%SiemensSeq%_tse_vfl", - "PercentPhaseFOV": 100, - "EchoTrainLength": 87, - "PhaseEncodingSteps": 247, - "AcquisitionMatrixPE": 324, - "ReconMatrixPE": 320, - "ParallelReductionFactorInPlane": 2, - "PixelBandwidth": 625, - "DwellTime": 2.5e-06, - "ImageOrientationPatientDICOM": [ - 0, - 1, - -0.000349045, - 0, - -0.000349045, - -1 ], - "InPlanePhaseEncodingDirectionDICOM": "ROW", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Siemens", + "ManufacturersModelName": "TrioTim", + "DeviceSerialNumber": "35388", + "StationName": "MRC35388", + "PatientPosition": "HFS", + "ProcedureStepDescription": "RM_CEREBRAL", + "SoftwareVersions": "syngo_MR_B17", + "MRAcquisitionType": "3D", + "SeriesDescription": "T2w", + "ProtocolName": "T2w", + "ScanningSequence": "SE", + "SequenceVariant": "SK_SP", + "ScanOptions": "PFP", + "SequenceName": "_spcR3d1_87", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS2D" + ], + "SeriesNumber": 13, + "AcquisitionTime": "19:07:9.250000", + "AcquisitionNumber": 1, + "SliceThickness": 0.8, + "SAR": 1.16019, + "EchoTime": 0.118, + "RepetitionTime": 2, + "FlipAngle": 180, + "PartialFourier": 1, + "BaseResolution": 320, + "ShimSetting": [ + 8686, + -1155, + -7953, + 133, + 836, + -44, + -41, + -387 + ], + "TxRefAmp": 325.481, + "PhaseResolution": 1.0125, + "ReceiveCoilName": "NeckMatrix", + "PulseSequenceDetails": "%SiemensSeq%_tse_vfl", + "PercentPhaseFOV": 100, + "EchoTrainLength": 87, + "PhaseEncodingSteps": 247, + "AcquisitionMatrixPE": 324, + "ReconMatrixPE": 320, + "ParallelReductionFactorInPlane": 2, + "PixelBandwidth": 625, + "DwellTime": 2.5e-06, + "ImageOrientationPatientDICOM": [ + 0, + 1, + -0.000349045, + 0, + -0.000349045, + -1 + ], + "InPlanePhaseEncodingDirectionDICOM": "ROW", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-vallHebron03/anat/sub-vallHebron03_flip-1_mt-on_space-other_MTS.json b/derivatives/data_preprocessed/sub-vallHebron03/anat/sub-vallHebron03_flip-1_mt-on_space-other_MTS.json index 6e864b2c81..268aa31466 100644 --- a/derivatives/data_preprocessed/sub-vallHebron03/anat/sub-vallHebron03_flip-1_mt-on_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-vallHebron03/anat/sub-vallHebron03_flip-1_mt-on_space-other_MTS.json @@ -1,59 +1,69 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Siemens", - "ManufacturersModelName": "TrioTim", - "DeviceSerialNumber": "35388", - "StationName": "MRC35388", - "PatientPosition": "HFS", - "ProcedureStepDescription": "RM_CEREBRAL", - "SoftwareVersions": "syngo_MR_B17", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-MT1", - "ProtocolName": "GRE-MT1", - "ScanningSequence": "GR", - "SequenceVariant": "MTC_SP", - "ScanOptions": "MT", - "SequenceName": "_fl3d1", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "DIS2D"], - "SeriesNumber": 17, - "AcquisitionTime": "18:02:30.105000", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SAR": 0.897039, - "EchoTime": 0.0035, - "RepetitionTime": 0.035, - "FlipAngle": 9, - "PartialFourier": 1, - "BaseResolution": 256, - "ShimSetting": [ - 8737, - -1156, - -7912, - -303, - 730, - 2425, - -94, - -225 ], - "TxRefAmp": 306.703, - "PhaseResolution": 1, - "ReceiveCoilName": "NeckMatrix", - "PulseSequenceDetails": "%SiemensSeq%_gre", - "PercentPhaseFOV": 100, - "PhaseEncodingSteps": 255, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 256, - "ParallelReductionFactorInPlane": 2, - "PixelBandwidth": 260, - "DwellTime": 7.5e-06, - "ImageOrientationPatientDICOM": [ - 1, - -1e-16, - 0, - 1e-16, - 0.975149, - 0.221548 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Siemens", + "ManufacturersModelName": "TrioTim", + "DeviceSerialNumber": "35388", + "StationName": "MRC35388", + "PatientPosition": "HFS", + "ProcedureStepDescription": "RM_CEREBRAL", + "SoftwareVersions": "syngo_MR_B17", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-MT1", + "ProtocolName": "GRE-MT1", + "ScanningSequence": "GR", + "SequenceVariant": "MTC_SP", + "ScanOptions": "MT", + "SequenceName": "_fl3d1", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "DIS2D" + ], + "SeriesNumber": 17, + "AcquisitionTime": "18:02:30.105000", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SAR": 0.897039, + "EchoTime": 0.0035, + "RepetitionTime": 0.035, + "FlipAngle": 9, + "PartialFourier": 1, + "BaseResolution": 256, + "ShimSetting": [ + 8737, + -1156, + -7912, + -303, + 730, + 2425, + -94, + -225 + ], + "TxRefAmp": 306.703, + "PhaseResolution": 1, + "ReceiveCoilName": "NeckMatrix", + "PulseSequenceDetails": "%SiemensSeq%_gre", + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 255, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "ParallelReductionFactorInPlane": 2, + "PixelBandwidth": 260, + "DwellTime": 7.5e-06, + "ImageOrientationPatientDICOM": [ + 1, + -1e-16, + 0, + 1e-16, + 0.975149, + 0.221548 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-vallHebron03/anat/sub-vallHebron03_flip-2_mt-off_space-other_MTS.json b/derivatives/data_preprocessed/sub-vallHebron03/anat/sub-vallHebron03_flip-2_mt-off_space-other_MTS.json index b475ccb920..712f1a3b37 100644 --- a/derivatives/data_preprocessed/sub-vallHebron03/anat/sub-vallHebron03_flip-2_mt-off_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-vallHebron03/anat/sub-vallHebron03_flip-2_mt-off_space-other_MTS.json @@ -1,58 +1,68 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Siemens", - "ManufacturersModelName": "TrioTim", - "DeviceSerialNumber": "35388", - "StationName": "MRC35388", - "PatientPosition": "HFS", - "ProcedureStepDescription": "RM_CEREBRAL", - "SoftwareVersions": "syngo_MR_B17", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-T1w", - "ProtocolName": "GRE-T1w", - "ScanningSequence": "GR", - "SequenceVariant": "SP", - "SequenceName": "_fl3d1", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "DIS2D"], - "SeriesNumber": 19, - "AcquisitionTime": "18:06:56.240000", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SAR": 0.0581613, - "EchoTime": 0.0035, - "RepetitionTime": 0.015, - "FlipAngle": 15, - "PartialFourier": 1, - "BaseResolution": 256, - "ShimSetting": [ - 8737, - -1156, - -7912, - -303, - 730, - 2425, - -94, - -225 ], - "TxRefAmp": 306.703, - "PhaseResolution": 1, - "ReceiveCoilName": "NeckMatrix", - "PulseSequenceDetails": "%SiemensSeq%_gre", - "PercentPhaseFOV": 100, - "PhaseEncodingSteps": 255, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 256, - "ParallelReductionFactorInPlane": 2, - "PixelBandwidth": 260, - "DwellTime": 7.5e-06, - "ImageOrientationPatientDICOM": [ - 1, - -1e-16, - 0, - 1e-16, - 0.975149, - 0.221548 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Siemens", + "ManufacturersModelName": "TrioTim", + "DeviceSerialNumber": "35388", + "StationName": "MRC35388", + "PatientPosition": "HFS", + "ProcedureStepDescription": "RM_CEREBRAL", + "SoftwareVersions": "syngo_MR_B17", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-T1w", + "ProtocolName": "GRE-T1w", + "ScanningSequence": "GR", + "SequenceVariant": "SP", + "SequenceName": "_fl3d1", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "DIS2D" + ], + "SeriesNumber": 19, + "AcquisitionTime": "18:06:56.240000", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SAR": 0.0581613, + "EchoTime": 0.0035, + "RepetitionTime": 0.015, + "FlipAngle": 15, + "PartialFourier": 1, + "BaseResolution": 256, + "ShimSetting": [ + 8737, + -1156, + -7912, + -303, + 730, + 2425, + -94, + -225 + ], + "TxRefAmp": 306.703, + "PhaseResolution": 1, + "ReceiveCoilName": "NeckMatrix", + "PulseSequenceDetails": "%SiemensSeq%_gre", + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 255, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "ParallelReductionFactorInPlane": 2, + "PixelBandwidth": 260, + "DwellTime": 7.5e-06, + "ImageOrientationPatientDICOM": [ + 1, + -1e-16, + 0, + 1e-16, + 0.975149, + 0.221548 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-vallHebron03/anat/sub-vallHebron03_space-other_T1w.json b/derivatives/data_preprocessed/sub-vallHebron03/anat/sub-vallHebron03_space-other_T1w.json index e1bec02ac3..507efe866e 100644 --- a/derivatives/data_preprocessed/sub-vallHebron03/anat/sub-vallHebron03_space-other_T1w.json +++ b/derivatives/data_preprocessed/sub-vallHebron03/anat/sub-vallHebron03_space-other_T1w.json @@ -1,60 +1,72 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Siemens", - "ManufacturersModelName": "TrioTim", - "DeviceSerialNumber": "35388", - "StationName": "MRC35388", - "PatientPosition": "HFS", - "ProcedureStepDescription": "RM_CEREBRAL", - "SoftwareVersions": "syngo_MR_B17", - "MRAcquisitionType": "3D", - "SeriesDescription": "T1w", - "ProtocolName": "T1w", - "ScanningSequence": "GR_IR", - "SequenceVariant": "SP_MP", - "ScanOptions": "IR", - "SequenceName": "_tfl3d1", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS2D"], - "SeriesNumber": 12, - "AcquisitionTime": "17:40:7.982500", - "AcquisitionNumber": 1, - "SliceThickness": 1, - "SAR": 0.0966432, - "EchoTime": 0.00321, - "RepetitionTime": 2, - "InversionTime": 1, - "FlipAngle": 9, - "PartialFourier": 1, - "BaseResolution": 320, - "ShimSetting": [ - 8636, - -1289, - -7795, - -68, - 1065, - 171, - 457, - -337 ], - "TxRefAmp": 291.952, - "PhaseResolution": 1, - "ReceiveCoilName": "NeckMatrix", - "PulseSequenceDetails": "%SiemensSeq%_tfl", - "PercentPhaseFOV": 81.25, - "PhaseEncodingSteps": 259, - "AcquisitionMatrixPE": 260, - "ReconMatrixPE": 320, - "ParallelReductionFactorInPlane": 2, - "PixelBandwidth": 150, - "DwellTime": 1.04e-05, - "ImageOrientationPatientDICOM": [ - 0, - 1, - 0, - 0, - 0, - -1 ], - "InPlanePhaseEncodingDirectionDICOM": "ROW", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Siemens", + "ManufacturersModelName": "TrioTim", + "DeviceSerialNumber": "35388", + "StationName": "MRC35388", + "PatientPosition": "HFS", + "ProcedureStepDescription": "RM_CEREBRAL", + "SoftwareVersions": "syngo_MR_B17", + "MRAcquisitionType": "3D", + "SeriesDescription": "T1w", + "ProtocolName": "T1w", + "ScanningSequence": "GR_IR", + "SequenceVariant": "SP_MP", + "ScanOptions": "IR", + "SequenceName": "_tfl3d1", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS2D" + ], + "SeriesNumber": 12, + "AcquisitionTime": "17:40:7.982500", + "AcquisitionNumber": 1, + "SliceThickness": 1, + "SAR": 0.0966432, + "EchoTime": 0.00321, + "RepetitionTime": 2, + "InversionTime": 1, + "FlipAngle": 9, + "PartialFourier": 1, + "BaseResolution": 320, + "ShimSetting": [ + 8636, + -1289, + -7795, + -68, + 1065, + 171, + 457, + -337 + ], + "TxRefAmp": 291.952, + "PhaseResolution": 1, + "ReceiveCoilName": "NeckMatrix", + "PulseSequenceDetails": "%SiemensSeq%_tfl", + "PercentPhaseFOV": 81.25, + "PhaseEncodingSteps": 259, + "AcquisitionMatrixPE": 260, + "ReconMatrixPE": 320, + "ParallelReductionFactorInPlane": 2, + "PixelBandwidth": 150, + "DwellTime": 1.04e-05, + "ImageOrientationPatientDICOM": [ + 0, + 1, + 0, + 0, + 0, + -1 + ], + "InPlanePhaseEncodingDirectionDICOM": "ROW", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-vallHebron03/anat/sub-vallHebron03_space-other_T2star.json b/derivatives/data_preprocessed/sub-vallHebron03/anat/sub-vallHebron03_space-other_T2star.json index 3c6f1a5b9f..39b9594ab5 100644 --- a/derivatives/data_preprocessed/sub-vallHebron03/anat/sub-vallHebron03_space-other_T2star.json +++ b/derivatives/data_preprocessed/sub-vallHebron03/anat/sub-vallHebron03_space-other_T2star.json @@ -65,5 +65,9 @@ "InPlanePhaseEncodingDirectionDICOM": "COL", "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0", - "AcquisitionDuration": 290.0 + "AcquisitionDuration": 290.0, + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-vallHebron03/anat/sub-vallHebron03_space-other_T2w.json b/derivatives/data_preprocessed/sub-vallHebron03/anat/sub-vallHebron03_space-other_T2w.json index 444cf68bed..d5047a8113 100644 --- a/derivatives/data_preprocessed/sub-vallHebron03/anat/sub-vallHebron03_space-other_T2w.json +++ b/derivatives/data_preprocessed/sub-vallHebron03/anat/sub-vallHebron03_space-other_T2w.json @@ -1,60 +1,72 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Siemens", - "ManufacturersModelName": "TrioTim", - "DeviceSerialNumber": "35388", - "StationName": "MRC35388", - "PatientPosition": "HFS", - "ProcedureStepDescription": "RM_CEREBRAL", - "SoftwareVersions": "syngo_MR_B17", - "MRAcquisitionType": "3D", - "SeriesDescription": "T2w", - "ProtocolName": "T2w", - "ScanningSequence": "SE", - "SequenceVariant": "SK_SP", - "ScanOptions": "PFP", - "SequenceName": "_spcR3d1_87", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS2D"], - "SeriesNumber": 14, - "AcquisitionTime": "17:50:57.810000", - "AcquisitionNumber": 1, - "SliceThickness": 0.8, - "SAR": 1.15497, - "EchoTime": 0.118, - "RepetitionTime": 2, - "FlipAngle": 180, - "PartialFourier": 1, - "BaseResolution": 320, - "ShimSetting": [ - 8686, - -1155, - -7953, - 133, - 836, - -44, - -41, - -387 ], - "TxRefAmp": 310.6, - "PhaseResolution": 1.0125, - "ReceiveCoilName": "NeckMatrix", - "PulseSequenceDetails": "%SiemensSeq%_tse_vfl", - "PercentPhaseFOV": 100, - "EchoTrainLength": 87, - "PhaseEncodingSteps": 247, - "AcquisitionMatrixPE": 324, - "ReconMatrixPE": 320, - "ParallelReductionFactorInPlane": 2, - "PixelBandwidth": 625, - "DwellTime": 2.5e-06, - "ImageOrientationPatientDICOM": [ - 0, - 1, - 0, - 0, - 0, - -1 ], - "InPlanePhaseEncodingDirectionDICOM": "ROW", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Siemens", + "ManufacturersModelName": "TrioTim", + "DeviceSerialNumber": "35388", + "StationName": "MRC35388", + "PatientPosition": "HFS", + "ProcedureStepDescription": "RM_CEREBRAL", + "SoftwareVersions": "syngo_MR_B17", + "MRAcquisitionType": "3D", + "SeriesDescription": "T2w", + "ProtocolName": "T2w", + "ScanningSequence": "SE", + "SequenceVariant": "SK_SP", + "ScanOptions": "PFP", + "SequenceName": "_spcR3d1_87", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS2D" + ], + "SeriesNumber": 14, + "AcquisitionTime": "17:50:57.810000", + "AcquisitionNumber": 1, + "SliceThickness": 0.8, + "SAR": 1.15497, + "EchoTime": 0.118, + "RepetitionTime": 2, + "FlipAngle": 180, + "PartialFourier": 1, + "BaseResolution": 320, + "ShimSetting": [ + 8686, + -1155, + -7953, + 133, + 836, + -44, + -41, + -387 + ], + "TxRefAmp": 310.6, + "PhaseResolution": 1.0125, + "ReceiveCoilName": "NeckMatrix", + "PulseSequenceDetails": "%SiemensSeq%_tse_vfl", + "PercentPhaseFOV": 100, + "EchoTrainLength": 87, + "PhaseEncodingSteps": 247, + "AcquisitionMatrixPE": 324, + "ReconMatrixPE": 320, + "ParallelReductionFactorInPlane": 2, + "PixelBandwidth": 625, + "DwellTime": 2.5e-06, + "ImageOrientationPatientDICOM": [ + 0, + 1, + 0, + 0, + 0, + -1 + ], + "InPlanePhaseEncodingDirectionDICOM": "ROW", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-vallHebron04/anat/sub-vallHebron04_flip-1_mt-on_space-other_MTS.json b/derivatives/data_preprocessed/sub-vallHebron04/anat/sub-vallHebron04_flip-1_mt-on_space-other_MTS.json index 77cadf51fc..b2106c3ea6 100644 --- a/derivatives/data_preprocessed/sub-vallHebron04/anat/sub-vallHebron04_flip-1_mt-on_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-vallHebron04/anat/sub-vallHebron04_flip-1_mt-on_space-other_MTS.json @@ -1,59 +1,69 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Siemens", - "ManufacturersModelName": "TrioTim", - "DeviceSerialNumber": "35388", - "StationName": "MRC35388", - "PatientPosition": "HFS", - "ProcedureStepDescription": "RM_CEREBRAL", - "SoftwareVersions": "syngo_MR_B17", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-MT1", - "ProtocolName": "GRE-MT1", - "ScanningSequence": "GR", - "SequenceVariant": "MTC_SP", - "ScanOptions": "MT", - "SequenceName": "_fl3d1", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "DIS2D"], - "SeriesNumber": 16, - "AcquisitionTime": "18:12:36.197500", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SAR": 1.23983, - "EchoTime": 0.0035, - "RepetitionTime": 0.037, - "FlipAngle": 9, - "PartialFourier": 1, - "BaseResolution": 256, - "ShimSetting": [ - 8733, - -1470, - -7883, - -320, - 683, - 1811, - -30, - -387 ], - "TxRefAmp": 321.508, - "PhaseResolution": 1, - "ReceiveCoilName": "NeckMatrix", - "PulseSequenceDetails": "%SiemensSeq%_gre", - "PercentPhaseFOV": 100, - "PhaseEncodingSteps": 255, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 256, - "ParallelReductionFactorInPlane": 2, - "PixelBandwidth": 260, - "DwellTime": 7.5e-06, - "ImageOrientationPatientDICOM": [ - 0.999877, - -0.00256461, - 0.0154931, - -1.85856e-08, - 0.986575, - 0.163311 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Siemens", + "ManufacturersModelName": "TrioTim", + "DeviceSerialNumber": "35388", + "StationName": "MRC35388", + "PatientPosition": "HFS", + "ProcedureStepDescription": "RM_CEREBRAL", + "SoftwareVersions": "syngo_MR_B17", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-MT1", + "ProtocolName": "GRE-MT1", + "ScanningSequence": "GR", + "SequenceVariant": "MTC_SP", + "ScanOptions": "MT", + "SequenceName": "_fl3d1", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "DIS2D" + ], + "SeriesNumber": 16, + "AcquisitionTime": "18:12:36.197500", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SAR": 1.23983, + "EchoTime": 0.0035, + "RepetitionTime": 0.037, + "FlipAngle": 9, + "PartialFourier": 1, + "BaseResolution": 256, + "ShimSetting": [ + 8733, + -1470, + -7883, + -320, + 683, + 1811, + -30, + -387 + ], + "TxRefAmp": 321.508, + "PhaseResolution": 1, + "ReceiveCoilName": "NeckMatrix", + "PulseSequenceDetails": "%SiemensSeq%_gre", + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 255, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "ParallelReductionFactorInPlane": 2, + "PixelBandwidth": 260, + "DwellTime": 7.5e-06, + "ImageOrientationPatientDICOM": [ + 0.999877, + -0.00256461, + 0.0154931, + -1.85856e-08, + 0.986575, + 0.163311 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-vallHebron04/anat/sub-vallHebron04_flip-2_mt-off_space-other_MTS.json b/derivatives/data_preprocessed/sub-vallHebron04/anat/sub-vallHebron04_flip-2_mt-off_space-other_MTS.json index 2881f34bef..92e4fbb657 100644 --- a/derivatives/data_preprocessed/sub-vallHebron04/anat/sub-vallHebron04_flip-2_mt-off_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-vallHebron04/anat/sub-vallHebron04_flip-2_mt-off_space-other_MTS.json @@ -1,58 +1,68 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Siemens", - "ManufacturersModelName": "TrioTim", - "DeviceSerialNumber": "35388", - "StationName": "MRC35388", - "PatientPosition": "HFS", - "ProcedureStepDescription": "RM_CEREBRAL", - "SoftwareVersions": "syngo_MR_B17", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-T1w", - "ProtocolName": "GRE-T1w", - "ScanningSequence": "GR", - "SequenceVariant": "SP", - "SequenceName": "_fl3d1", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "DIS2D"], - "SeriesNumber": 18, - "AcquisitionTime": "18:17:51.405000", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SAR": 0.0849278, - "EchoTime": 0.0035, - "RepetitionTime": 0.015, - "FlipAngle": 15, - "PartialFourier": 1, - "BaseResolution": 256, - "ShimSetting": [ - 8741, - -1530, - -7847, - -418, - 879, - 1002, - 343, - -466 ], - "TxRefAmp": 321.508, - "PhaseResolution": 1, - "ReceiveCoilName": "NeckMatrix", - "PulseSequenceDetails": "%SiemensSeq%_gre", - "PercentPhaseFOV": 100, - "PhaseEncodingSteps": 255, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 256, - "ParallelReductionFactorInPlane": 2, - "PixelBandwidth": 260, - "DwellTime": 7.5e-06, - "ImageOrientationPatientDICOM": [ - 0.999877, - -0.00256461, - 0.0154931, - -1.85856e-08, - 0.986575, - 0.163311 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Siemens", + "ManufacturersModelName": "TrioTim", + "DeviceSerialNumber": "35388", + "StationName": "MRC35388", + "PatientPosition": "HFS", + "ProcedureStepDescription": "RM_CEREBRAL", + "SoftwareVersions": "syngo_MR_B17", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-T1w", + "ProtocolName": "GRE-T1w", + "ScanningSequence": "GR", + "SequenceVariant": "SP", + "SequenceName": "_fl3d1", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "DIS2D" + ], + "SeriesNumber": 18, + "AcquisitionTime": "18:17:51.405000", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SAR": 0.0849278, + "EchoTime": 0.0035, + "RepetitionTime": 0.015, + "FlipAngle": 15, + "PartialFourier": 1, + "BaseResolution": 256, + "ShimSetting": [ + 8741, + -1530, + -7847, + -418, + 879, + 1002, + 343, + -466 + ], + "TxRefAmp": 321.508, + "PhaseResolution": 1, + "ReceiveCoilName": "NeckMatrix", + "PulseSequenceDetails": "%SiemensSeq%_gre", + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 255, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "ParallelReductionFactorInPlane": 2, + "PixelBandwidth": 260, + "DwellTime": 7.5e-06, + "ImageOrientationPatientDICOM": [ + 0.999877, + -0.00256461, + 0.0154931, + -1.85856e-08, + 0.986575, + 0.163311 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-vallHebron04/anat/sub-vallHebron04_space-other_T1w.json b/derivatives/data_preprocessed/sub-vallHebron04/anat/sub-vallHebron04_space-other_T1w.json index e1b515dee5..d3ab17c708 100644 --- a/derivatives/data_preprocessed/sub-vallHebron04/anat/sub-vallHebron04_space-other_T1w.json +++ b/derivatives/data_preprocessed/sub-vallHebron04/anat/sub-vallHebron04_space-other_T1w.json @@ -1,60 +1,72 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Siemens", - "ManufacturersModelName": "TrioTim", - "DeviceSerialNumber": "35388", - "StationName": "MRC35388", - "PatientPosition": "HFS", - "ProcedureStepDescription": "RM_CEREBRAL", - "SoftwareVersions": "syngo_MR_B17", - "MRAcquisitionType": "3D", - "SeriesDescription": "T1w", - "ProtocolName": "T1w", - "ScanningSequence": "GR_IR", - "SequenceVariant": "SP_MP", - "ScanOptions": "IR", - "SequenceName": "_tfl3d1", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS2D"], - "SeriesNumber": 12, - "AcquisitionTime": "17:55:36.007500", - "AcquisitionNumber": 1, - "SliceThickness": 1, - "SAR": 0.119452, - "EchoTime": 0.00321, - "RepetitionTime": 2, - "InversionTime": 1, - "FlipAngle": 9, - "PartialFourier": 1, - "BaseResolution": 320, - "ShimSetting": [ - 8631, - -1304, - -7679, - -186, - 914, - -220, - 470, - -348 ], - "TxRefAmp": 285.467, - "PhaseResolution": 1, - "ReceiveCoilName": "NeckMatrix", - "PulseSequenceDetails": "%SiemensSeq%_tfl", - "PercentPhaseFOV": 81.25, - "PhaseEncodingSteps": 259, - "AcquisitionMatrixPE": 260, - "ReconMatrixPE": 320, - "ParallelReductionFactorInPlane": 2, - "PixelBandwidth": 150, - "DwellTime": 1.04e-05, - "ImageOrientationPatientDICOM": [ - 0.00224058, - 0.999997, - -1.70837e-08, - 0.0155466, - -3.48506e-05, - -0.999879 ], - "InPlanePhaseEncodingDirectionDICOM": "ROW", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Siemens", + "ManufacturersModelName": "TrioTim", + "DeviceSerialNumber": "35388", + "StationName": "MRC35388", + "PatientPosition": "HFS", + "ProcedureStepDescription": "RM_CEREBRAL", + "SoftwareVersions": "syngo_MR_B17", + "MRAcquisitionType": "3D", + "SeriesDescription": "T1w", + "ProtocolName": "T1w", + "ScanningSequence": "GR_IR", + "SequenceVariant": "SP_MP", + "ScanOptions": "IR", + "SequenceName": "_tfl3d1", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS2D" + ], + "SeriesNumber": 12, + "AcquisitionTime": "17:55:36.007500", + "AcquisitionNumber": 1, + "SliceThickness": 1, + "SAR": 0.119452, + "EchoTime": 0.00321, + "RepetitionTime": 2, + "InversionTime": 1, + "FlipAngle": 9, + "PartialFourier": 1, + "BaseResolution": 320, + "ShimSetting": [ + 8631, + -1304, + -7679, + -186, + 914, + -220, + 470, + -348 + ], + "TxRefAmp": 285.467, + "PhaseResolution": 1, + "ReceiveCoilName": "NeckMatrix", + "PulseSequenceDetails": "%SiemensSeq%_tfl", + "PercentPhaseFOV": 81.25, + "PhaseEncodingSteps": 259, + "AcquisitionMatrixPE": 260, + "ReconMatrixPE": 320, + "ParallelReductionFactorInPlane": 2, + "PixelBandwidth": 150, + "DwellTime": 1.04e-05, + "ImageOrientationPatientDICOM": [ + 0.00224058, + 0.999997, + -1.70837e-08, + 0.0155466, + -3.48506e-05, + -0.999879 + ], + "InPlanePhaseEncodingDirectionDICOM": "ROW", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-vallHebron04/anat/sub-vallHebron04_space-other_T2star.json b/derivatives/data_preprocessed/sub-vallHebron04/anat/sub-vallHebron04_space-other_T2star.json index d2e39f069a..cd52583acf 100644 --- a/derivatives/data_preprocessed/sub-vallHebron04/anat/sub-vallHebron04_space-other_T2star.json +++ b/derivatives/data_preprocessed/sub-vallHebron04/anat/sub-vallHebron04_space-other_T2star.json @@ -64,5 +64,9 @@ "InPlanePhaseEncodingDirectionDICOM": "COL", "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0", - "AcquisitionDuration": 290.0 + "AcquisitionDuration": 290.0, + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-vallHebron04/anat/sub-vallHebron04_space-other_T2w.json b/derivatives/data_preprocessed/sub-vallHebron04/anat/sub-vallHebron04_space-other_T2w.json index 51c1f958f4..54ae538f8c 100644 --- a/derivatives/data_preprocessed/sub-vallHebron04/anat/sub-vallHebron04_space-other_T2w.json +++ b/derivatives/data_preprocessed/sub-vallHebron04/anat/sub-vallHebron04_space-other_T2w.json @@ -1,60 +1,72 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Siemens", - "ManufacturersModelName": "TrioTim", - "DeviceSerialNumber": "35388", - "StationName": "MRC35388", - "PatientPosition": "HFS", - "ProcedureStepDescription": "RM_CEREBRAL", - "SoftwareVersions": "syngo_MR_B17", - "MRAcquisitionType": "3D", - "SeriesDescription": "T2w", - "ProtocolName": "T2w", - "ScanningSequence": "SE", - "SequenceVariant": "SK_SP", - "ScanOptions": "PFP", - "SequenceName": "_spcR3d1_87", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS2D"], - "SeriesNumber": 13, - "AcquisitionTime": "18:00:57.232500", - "AcquisitionNumber": 1, - "SliceThickness": 0.8, - "SAR": 1.2728, - "EchoTime": 0.118, - "RepetitionTime": 2, - "FlipAngle": 165, - "PartialFourier": 1, - "BaseResolution": 320, - "ShimSetting": [ - 8686, - -1155, - -7953, - 133, - 836, - -44, - -41, - -387 ], - "TxRefAmp": 325.565, - "PhaseResolution": 1.0125, - "ReceiveCoilName": "NeckMatrix", - "PulseSequenceDetails": "%SiemensSeq%_tse_vfl", - "PercentPhaseFOV": 100, - "EchoTrainLength": 87, - "PhaseEncodingSteps": 247, - "AcquisitionMatrixPE": 324, - "ReconMatrixPE": 320, - "ParallelReductionFactorInPlane": 2, - "PixelBandwidth": 625, - "DwellTime": 2.5e-06, - "ImageOrientationPatientDICOM": [ - 0.00224058, - 0.999997, - -1.70837e-08, - 0.0155466, - -3.48506e-05, - -0.999879 ], - "InPlanePhaseEncodingDirectionDICOM": "ROW", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Siemens", + "ManufacturersModelName": "TrioTim", + "DeviceSerialNumber": "35388", + "StationName": "MRC35388", + "PatientPosition": "HFS", + "ProcedureStepDescription": "RM_CEREBRAL", + "SoftwareVersions": "syngo_MR_B17", + "MRAcquisitionType": "3D", + "SeriesDescription": "T2w", + "ProtocolName": "T2w", + "ScanningSequence": "SE", + "SequenceVariant": "SK_SP", + "ScanOptions": "PFP", + "SequenceName": "_spcR3d1_87", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS2D" + ], + "SeriesNumber": 13, + "AcquisitionTime": "18:00:57.232500", + "AcquisitionNumber": 1, + "SliceThickness": 0.8, + "SAR": 1.2728, + "EchoTime": 0.118, + "RepetitionTime": 2, + "FlipAngle": 165, + "PartialFourier": 1, + "BaseResolution": 320, + "ShimSetting": [ + 8686, + -1155, + -7953, + 133, + 836, + -44, + -41, + -387 + ], + "TxRefAmp": 325.565, + "PhaseResolution": 1.0125, + "ReceiveCoilName": "NeckMatrix", + "PulseSequenceDetails": "%SiemensSeq%_tse_vfl", + "PercentPhaseFOV": 100, + "EchoTrainLength": 87, + "PhaseEncodingSteps": 247, + "AcquisitionMatrixPE": 324, + "ReconMatrixPE": 320, + "ParallelReductionFactorInPlane": 2, + "PixelBandwidth": 625, + "DwellTime": 2.5e-06, + "ImageOrientationPatientDICOM": [ + 0.00224058, + 0.999997, + -1.70837e-08, + 0.0155466, + -3.48506e-05, + -0.999879 + ], + "InPlanePhaseEncodingDirectionDICOM": "ROW", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-vallHebron05/anat/sub-vallHebron05_flip-1_mt-on_space-other_MTS.json b/derivatives/data_preprocessed/sub-vallHebron05/anat/sub-vallHebron05_flip-1_mt-on_space-other_MTS.json index e993938bb6..5c9a07af70 100644 --- a/derivatives/data_preprocessed/sub-vallHebron05/anat/sub-vallHebron05_flip-1_mt-on_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-vallHebron05/anat/sub-vallHebron05_flip-1_mt-on_space-other_MTS.json @@ -1,59 +1,69 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Siemens", - "ManufacturersModelName": "TrioTim", - "DeviceSerialNumber": "35388", - "StationName": "MRC35388", - "PatientPosition": "HFS", - "ProcedureStepDescription": "RM_CEREBRAL", - "SoftwareVersions": "syngo_MR_B17", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-MT1", - "ProtocolName": "GRE-MT1", - "ScanningSequence": "GR", - "SequenceVariant": "MTC_SP", - "ScanOptions": "MT", - "SequenceName": "_fl3d1", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "DIS2D"], - "SeriesNumber": 19, - "AcquisitionTime": "19:22:52.762500", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SAR": 0.901627, - "EchoTime": 0.0035, - "RepetitionTime": 0.035, - "FlipAngle": 9, - "PartialFourier": 1, - "BaseResolution": 256, - "ShimSetting": [ - 8763, - -1439, - -7771, - 331, - 859, - 722, - 409, - -119 ], - "TxRefAmp": 308.855, - "PhaseResolution": 1, - "ReceiveCoilName": "NeckMatrix", - "PulseSequenceDetails": "%SiemensSeq%_gre", - "PercentPhaseFOV": 100, - "PhaseEncodingSteps": 255, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 256, - "ParallelReductionFactorInPlane": 2, - "PixelBandwidth": 260, - "DwellTime": 7.5e-06, - "ImageOrientationPatientDICOM": [ - 0.999662, - -0.00139835, - -0.0259563, - -4.01398e-08, - 0.998552, - -0.053797 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Siemens", + "ManufacturersModelName": "TrioTim", + "DeviceSerialNumber": "35388", + "StationName": "MRC35388", + "PatientPosition": "HFS", + "ProcedureStepDescription": "RM_CEREBRAL", + "SoftwareVersions": "syngo_MR_B17", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-MT1", + "ProtocolName": "GRE-MT1", + "ScanningSequence": "GR", + "SequenceVariant": "MTC_SP", + "ScanOptions": "MT", + "SequenceName": "_fl3d1", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "DIS2D" + ], + "SeriesNumber": 19, + "AcquisitionTime": "19:22:52.762500", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SAR": 0.901627, + "EchoTime": 0.0035, + "RepetitionTime": 0.035, + "FlipAngle": 9, + "PartialFourier": 1, + "BaseResolution": 256, + "ShimSetting": [ + 8763, + -1439, + -7771, + 331, + 859, + 722, + 409, + -119 + ], + "TxRefAmp": 308.855, + "PhaseResolution": 1, + "ReceiveCoilName": "NeckMatrix", + "PulseSequenceDetails": "%SiemensSeq%_gre", + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 255, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "ParallelReductionFactorInPlane": 2, + "PixelBandwidth": 260, + "DwellTime": 7.5e-06, + "ImageOrientationPatientDICOM": [ + 0.999662, + -0.00139835, + -0.0259563, + -4.01398e-08, + 0.998552, + -0.053797 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-vallHebron05/anat/sub-vallHebron05_flip-2_mt-off_space-other_MTS.json b/derivatives/data_preprocessed/sub-vallHebron05/anat/sub-vallHebron05_flip-2_mt-off_space-other_MTS.json index d38d43af29..3c872f9a0a 100644 --- a/derivatives/data_preprocessed/sub-vallHebron05/anat/sub-vallHebron05_flip-2_mt-off_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-vallHebron05/anat/sub-vallHebron05_flip-2_mt-off_space-other_MTS.json @@ -1,58 +1,68 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Siemens", - "ManufacturersModelName": "TrioTim", - "DeviceSerialNumber": "35388", - "StationName": "MRC35388", - "PatientPosition": "HFS", - "ProcedureStepDescription": "RM_CEREBRAL", - "SoftwareVersions": "syngo_MR_B17", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-T1w", - "ProtocolName": "GRE-T1w", - "ScanningSequence": "GR", - "SequenceVariant": "SP", - "SequenceName": "_fl3d1", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "DIS2D"], - "SeriesNumber": 21, - "AcquisitionTime": "19:27:27.422500", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SAR": 0.0584588, - "EchoTime": 0.0035, - "RepetitionTime": 0.015, - "FlipAngle": 15, - "PartialFourier": 1, - "BaseResolution": 256, - "ShimSetting": [ - 8743, - -1436, - -7781, - 369, - 749, - 1067, - 280, - -85 ], - "TxRefAmp": 308.855, - "PhaseResolution": 1, - "ReceiveCoilName": "HeadMatrix", - "PulseSequenceDetails": "%SiemensSeq%_gre", - "PercentPhaseFOV": 100, - "PhaseEncodingSteps": 255, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 256, - "ParallelReductionFactorInPlane": 2, - "PixelBandwidth": 260, - "DwellTime": 7.5e-06, - "ImageOrientationPatientDICOM": [ - 0.999662, - -0.00139835, - -0.0259563, - -4.01398e-08, - 0.998552, - -0.053797 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Siemens", + "ManufacturersModelName": "TrioTim", + "DeviceSerialNumber": "35388", + "StationName": "MRC35388", + "PatientPosition": "HFS", + "ProcedureStepDescription": "RM_CEREBRAL", + "SoftwareVersions": "syngo_MR_B17", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-T1w", + "ProtocolName": "GRE-T1w", + "ScanningSequence": "GR", + "SequenceVariant": "SP", + "SequenceName": "_fl3d1", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "DIS2D" + ], + "SeriesNumber": 21, + "AcquisitionTime": "19:27:27.422500", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SAR": 0.0584588, + "EchoTime": 0.0035, + "RepetitionTime": 0.015, + "FlipAngle": 15, + "PartialFourier": 1, + "BaseResolution": 256, + "ShimSetting": [ + 8743, + -1436, + -7781, + 369, + 749, + 1067, + 280, + -85 + ], + "TxRefAmp": 308.855, + "PhaseResolution": 1, + "ReceiveCoilName": "HeadMatrix", + "PulseSequenceDetails": "%SiemensSeq%_gre", + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 255, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "ParallelReductionFactorInPlane": 2, + "PixelBandwidth": 260, + "DwellTime": 7.5e-06, + "ImageOrientationPatientDICOM": [ + 0.999662, + -0.00139835, + -0.0259563, + -4.01398e-08, + 0.998552, + -0.053797 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-vallHebron05/anat/sub-vallHebron05_space-other_T1w.json b/derivatives/data_preprocessed/sub-vallHebron05/anat/sub-vallHebron05_space-other_T1w.json index e7a3ec630a..542481aa91 100644 --- a/derivatives/data_preprocessed/sub-vallHebron05/anat/sub-vallHebron05_space-other_T1w.json +++ b/derivatives/data_preprocessed/sub-vallHebron05/anat/sub-vallHebron05_space-other_T1w.json @@ -1,60 +1,72 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Siemens", - "ManufacturersModelName": "TrioTim", - "DeviceSerialNumber": "35388", - "StationName": "MRC35388", - "PatientPosition": "HFS", - "ProcedureStepDescription": "RM_CEREBRAL", - "SoftwareVersions": "syngo_MR_B17", - "MRAcquisitionType": "3D", - "SeriesDescription": "T1w", - "ProtocolName": "T1w", - "ScanningSequence": "GR_IR", - "SequenceVariant": "SP_MP", - "ScanOptions": "IR", - "SequenceName": "_tfl3d1", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS2D"], - "SeriesNumber": 15, - "AcquisitionTime": "19:05:46.800000", - "AcquisitionNumber": 1, - "SliceThickness": 1, - "SAR": 0.097471, - "EchoTime": 0.00321, - "RepetitionTime": 2, - "InversionTime": 1, - "FlipAngle": 9, - "PartialFourier": 1, - "BaseResolution": 320, - "ShimSetting": [ - 8628, - -1198, - -7604, - 34, - 1081, - -58, - 447, - -293 ], - "TxRefAmp": 297.799, - "PhaseResolution": 1, - "ReceiveCoilName": "NeckMatrix", - "PulseSequenceDetails": "%SiemensSeq%_tfl", - "PercentPhaseFOV": 81.25, - "PhaseEncodingSteps": 259, - "AcquisitionMatrixPE": 260, - "ReconMatrixPE": 320, - "ParallelReductionFactorInPlane": 2, - "PixelBandwidth": 150, - "DwellTime": 1.04e-05, - "ImageOrientationPatientDICOM": [ - 0.00117392, - 0.999999, - 4.49074e-08, - -0.0259683, - 3.05297e-05, - -0.999663 ], - "InPlanePhaseEncodingDirectionDICOM": "ROW", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Siemens", + "ManufacturersModelName": "TrioTim", + "DeviceSerialNumber": "35388", + "StationName": "MRC35388", + "PatientPosition": "HFS", + "ProcedureStepDescription": "RM_CEREBRAL", + "SoftwareVersions": "syngo_MR_B17", + "MRAcquisitionType": "3D", + "SeriesDescription": "T1w", + "ProtocolName": "T1w", + "ScanningSequence": "GR_IR", + "SequenceVariant": "SP_MP", + "ScanOptions": "IR", + "SequenceName": "_tfl3d1", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS2D" + ], + "SeriesNumber": 15, + "AcquisitionTime": "19:05:46.800000", + "AcquisitionNumber": 1, + "SliceThickness": 1, + "SAR": 0.097471, + "EchoTime": 0.00321, + "RepetitionTime": 2, + "InversionTime": 1, + "FlipAngle": 9, + "PartialFourier": 1, + "BaseResolution": 320, + "ShimSetting": [ + 8628, + -1198, + -7604, + 34, + 1081, + -58, + 447, + -293 + ], + "TxRefAmp": 297.799, + "PhaseResolution": 1, + "ReceiveCoilName": "NeckMatrix", + "PulseSequenceDetails": "%SiemensSeq%_tfl", + "PercentPhaseFOV": 81.25, + "PhaseEncodingSteps": 259, + "AcquisitionMatrixPE": 260, + "ReconMatrixPE": 320, + "ParallelReductionFactorInPlane": 2, + "PixelBandwidth": 150, + "DwellTime": 1.04e-05, + "ImageOrientationPatientDICOM": [ + 0.00117392, + 0.999999, + 4.49074e-08, + -0.0259683, + 3.05297e-05, + -0.999663 + ], + "InPlanePhaseEncodingDirectionDICOM": "ROW", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-vallHebron05/anat/sub-vallHebron05_space-other_T2star.json b/derivatives/data_preprocessed/sub-vallHebron05/anat/sub-vallHebron05_space-other_T2star.json index 0f72b75439..edd8a99b23 100644 --- a/derivatives/data_preprocessed/sub-vallHebron05/anat/sub-vallHebron05_space-other_T2star.json +++ b/derivatives/data_preprocessed/sub-vallHebron05/anat/sub-vallHebron05_space-other_T2star.json @@ -64,5 +64,9 @@ "InPlanePhaseEncodingDirectionDICOM": "COL", "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0", - "AcquisitionDuration": 290.0 + "AcquisitionDuration": 290.0, + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-vallHebron05/anat/sub-vallHebron05_space-other_T2w.json b/derivatives/data_preprocessed/sub-vallHebron05/anat/sub-vallHebron05_space-other_T2w.json index 39aace5772..e1e70f9ce5 100644 --- a/derivatives/data_preprocessed/sub-vallHebron05/anat/sub-vallHebron05_space-other_T2w.json +++ b/derivatives/data_preprocessed/sub-vallHebron05/anat/sub-vallHebron05_space-other_T2w.json @@ -1,60 +1,72 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Siemens", - "ManufacturersModelName": "TrioTim", - "DeviceSerialNumber": "35388", - "StationName": "MRC35388", - "PatientPosition": "HFS", - "ProcedureStepDescription": "RM_CEREBRAL", - "SoftwareVersions": "syngo_MR_B17", - "MRAcquisitionType": "3D", - "SeriesDescription": "T2w", - "ProtocolName": "T2w", - "ScanningSequence": "SE", - "SequenceVariant": "SK_SP", - "ScanOptions": "PFP", - "SequenceName": "_spcR3d1_87", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS2D"], - "SeriesNumber": 16, - "AcquisitionTime": "19:10:55.247500", - "AcquisitionNumber": 1, - "SliceThickness": 0.8, - "SAR": 1.05565, - "EchoTime": 0.118, - "RepetitionTime": 2, - "FlipAngle": 180, - "PartialFourier": 1, - "BaseResolution": 320, - "ShimSetting": [ - 8686, - -1155, - -7953, - 133, - 836, - -44, - -41, - -387 ], - "TxRefAmp": 302.23, - "PhaseResolution": 1.0125, - "ReceiveCoilName": "NeckMatrix", - "PulseSequenceDetails": "%SiemensSeq%_tse_vfl", - "PercentPhaseFOV": 100, - "EchoTrainLength": 87, - "PhaseEncodingSteps": 247, - "AcquisitionMatrixPE": 324, - "ReconMatrixPE": 320, - "ParallelReductionFactorInPlane": 2, - "PixelBandwidth": 625, - "DwellTime": 2.5e-06, - "ImageOrientationPatientDICOM": [ - 0.00117392, - 0.999999, - 4.49074e-08, - -0.0259683, - 3.05297e-05, - -0.999663 ], - "InPlanePhaseEncodingDirectionDICOM": "ROW", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Siemens", + "ManufacturersModelName": "TrioTim", + "DeviceSerialNumber": "35388", + "StationName": "MRC35388", + "PatientPosition": "HFS", + "ProcedureStepDescription": "RM_CEREBRAL", + "SoftwareVersions": "syngo_MR_B17", + "MRAcquisitionType": "3D", + "SeriesDescription": "T2w", + "ProtocolName": "T2w", + "ScanningSequence": "SE", + "SequenceVariant": "SK_SP", + "ScanOptions": "PFP", + "SequenceName": "_spcR3d1_87", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS2D" + ], + "SeriesNumber": 16, + "AcquisitionTime": "19:10:55.247500", + "AcquisitionNumber": 1, + "SliceThickness": 0.8, + "SAR": 1.05565, + "EchoTime": 0.118, + "RepetitionTime": 2, + "FlipAngle": 180, + "PartialFourier": 1, + 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b/derivatives/data_preprocessed/sub-vallHebron06/anat/sub-vallHebron06_flip-1_mt-on_space-other_MTS.json index 9e491c1db6..ec8506993c 100644 --- a/derivatives/data_preprocessed/sub-vallHebron06/anat/sub-vallHebron06_flip-1_mt-on_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-vallHebron06/anat/sub-vallHebron06_flip-1_mt-on_space-other_MTS.json @@ -1,59 +1,69 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Siemens", - "ManufacturersModelName": "TrioTim", - "DeviceSerialNumber": "35388", - "StationName": "MRC35388", - "PatientPosition": "HFS", - "ProcedureStepDescription": "RM_CEREBRAL", - "SoftwareVersions": "syngo_MR_B17", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-MT1", - "ProtocolName": "GRE-MT1", - "ScanningSequence": "GR", - "SequenceVariant": "MTC_SP", - "ScanOptions": "MT", - "SequenceName": "_fl3d1", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "DIS2D"], - "SeriesNumber": 18, - "AcquisitionTime": "18:10:23.765000", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SAR": 0.839776, - "EchoTime": 0.0035, - "RepetitionTime": 0.035, - "FlipAngle": 9, - "PartialFourier": 1, - "BaseResolution": 256, - "ShimSetting": [ - 8608, - -1556, - -7834, - 277, - 1070, - 24, - 1007, - -745 ], - "TxRefAmp": 315.101, - "PhaseResolution": 1, - "ReceiveCoilName": "NeckMatrix", - "PulseSequenceDetails": "%SiemensSeq%_gre", - "PercentPhaseFOV": 100, - "PhaseEncodingSteps": 255, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 256, - "ParallelReductionFactorInPlane": 2, - "PixelBandwidth": 260, - "DwellTime": 7.5e-06, - "ImageOrientationPatientDICOM": [ - 1, - 2e-16, - 0, - -2e-16, - 0.982613, - 0.185667 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Siemens", + "ManufacturersModelName": "TrioTim", + "DeviceSerialNumber": "35388", + "StationName": "MRC35388", + "PatientPosition": "HFS", + "ProcedureStepDescription": "RM_CEREBRAL", + "SoftwareVersions": "syngo_MR_B17", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-MT1", + "ProtocolName": "GRE-MT1", + "ScanningSequence": "GR", + "SequenceVariant": "MTC_SP", + "ScanOptions": "MT", + "SequenceName": "_fl3d1", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "DIS2D" + ], + "SeriesNumber": 18, + "AcquisitionTime": "18:10:23.765000", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SAR": 0.839776, + "EchoTime": 0.0035, + "RepetitionTime": 0.035, + "FlipAngle": 9, + "PartialFourier": 1, + "BaseResolution": 256, + "ShimSetting": [ + 8608, + -1556, + -7834, + 277, + 1070, + 24, + 1007, + -745 + ], + "TxRefAmp": 315.101, + "PhaseResolution": 1, + "ReceiveCoilName": "NeckMatrix", + "PulseSequenceDetails": "%SiemensSeq%_gre", + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 255, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "ParallelReductionFactorInPlane": 2, + "PixelBandwidth": 260, + "DwellTime": 7.5e-06, + "ImageOrientationPatientDICOM": [ + 1, + 2e-16, + 0, + -2e-16, + 0.982613, + 0.185667 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-vallHebron06/anat/sub-vallHebron06_flip-2_mt-off_space-other_MTS.json b/derivatives/data_preprocessed/sub-vallHebron06/anat/sub-vallHebron06_flip-2_mt-off_space-other_MTS.json index 59d11ec3c9..6030ef53c0 100644 --- a/derivatives/data_preprocessed/sub-vallHebron06/anat/sub-vallHebron06_flip-2_mt-off_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-vallHebron06/anat/sub-vallHebron06_flip-2_mt-off_space-other_MTS.json @@ -1,58 +1,68 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Siemens", - "ManufacturersModelName": "TrioTim", - "DeviceSerialNumber": "35388", - "StationName": "MRC35388", - "PatientPosition": "HFS", - "ProcedureStepDescription": "RM_CEREBRAL", - "SoftwareVersions": "syngo_MR_B17", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-T1w", - "ProtocolName": "GRE-T1w", - "ScanningSequence": "GR", - "SequenceVariant": "SP", - "SequenceName": "_fl3d1", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "DIS2D"], - "SeriesNumber": 20, - "AcquisitionTime": "18:14:51.225000", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SAR": 0.0544486, - "EchoTime": 0.0035, - "RepetitionTime": 0.015, - "FlipAngle": 15, - "PartialFourier": 1, - "BaseResolution": 256, - "ShimSetting": [ - 8608, - -1556, - -7834, - 277, - 1070, - 24, - 1007, - -745 ], - "TxRefAmp": 315.101, - "PhaseResolution": 1, - "ReceiveCoilName": "NeckMatrix", - "PulseSequenceDetails": "%SiemensSeq%_gre", - "PercentPhaseFOV": 100, - "PhaseEncodingSteps": 255, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 256, - "ParallelReductionFactorInPlane": 2, - "PixelBandwidth": 260, - "DwellTime": 7.5e-06, - "ImageOrientationPatientDICOM": [ - 1, - 2e-16, - 0, - -2e-16, - 0.982613, - 0.185667 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Siemens", + "ManufacturersModelName": "TrioTim", + "DeviceSerialNumber": "35388", + "StationName": "MRC35388", + "PatientPosition": "HFS", + "ProcedureStepDescription": "RM_CEREBRAL", + "SoftwareVersions": "syngo_MR_B17", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-T1w", + "ProtocolName": "GRE-T1w", + "ScanningSequence": "GR", + "SequenceVariant": "SP", + "SequenceName": "_fl3d1", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "DIS2D" + ], + "SeriesNumber": 20, + "AcquisitionTime": "18:14:51.225000", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SAR": 0.0544486, + "EchoTime": 0.0035, + "RepetitionTime": 0.015, + "FlipAngle": 15, + "PartialFourier": 1, + "BaseResolution": 256, + "ShimSetting": [ + 8608, + -1556, + -7834, + 277, + 1070, + 24, + 1007, + -745 + ], + "TxRefAmp": 315.101, + "PhaseResolution": 1, + "ReceiveCoilName": "NeckMatrix", + "PulseSequenceDetails": "%SiemensSeq%_gre", + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 255, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "ParallelReductionFactorInPlane": 2, + "PixelBandwidth": 260, + "DwellTime": 7.5e-06, + "ImageOrientationPatientDICOM": [ + 1, + 2e-16, + 0, + -2e-16, + 0.982613, + 0.185667 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-vallHebron06/anat/sub-vallHebron06_space-other_T1w.json b/derivatives/data_preprocessed/sub-vallHebron06/anat/sub-vallHebron06_space-other_T1w.json index d32ef015c0..e8b5b548a2 100644 --- a/derivatives/data_preprocessed/sub-vallHebron06/anat/sub-vallHebron06_space-other_T1w.json +++ b/derivatives/data_preprocessed/sub-vallHebron06/anat/sub-vallHebron06_space-other_T1w.json @@ -1,60 +1,72 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Siemens", - "ManufacturersModelName": "TrioTim", - "DeviceSerialNumber": "35388", - "StationName": "MRC35388", - "PatientPosition": "HFS", - "ProcedureStepDescription": "RM_CEREBRAL", - "SoftwareVersions": "syngo_MR_B17", - "MRAcquisitionType": "3D", - "SeriesDescription": "T1w", - "ProtocolName": "T1w", - "ScanningSequence": "GR_IR", - "SequenceVariant": "SP_MP", - "ScanOptions": "IR", - "SequenceName": "_tfl3d1", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS2D"], - "SeriesNumber": 14, - "AcquisitionTime": "17:51:18.985000", - "AcquisitionNumber": 1, - "SliceThickness": 1, - "SAR": 0.100892, - "EchoTime": 0.00321, - "RepetitionTime": 2, - "InversionTime": 1, - "FlipAngle": 9, - "PartialFourier": 1, - "BaseResolution": 320, - "ShimSetting": [ - 8610, - -1264, - -7668, - 136, - 1049, - -206, - 552, - -575 ], - "TxRefAmp": 306.258, - "PhaseResolution": 1, - "ReceiveCoilName": "NeckMatrix", - "PulseSequenceDetails": "%SiemensSeq%_tfl", - "PercentPhaseFOV": 81.25, - "PhaseEncodingSteps": 259, - "AcquisitionMatrixPE": 260, - "ReconMatrixPE": 320, - "ParallelReductionFactorInPlane": 2, - "PixelBandwidth": 150, - "DwellTime": 1.04e-05, - "ImageOrientationPatientDICOM": [ - -0.00339228, - 0.999994, - -0.000348966, - -0.0206658, - -0.000418998, - -0.999786 ], - "InPlanePhaseEncodingDirectionDICOM": "ROW", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Siemens", + "ManufacturersModelName": "TrioTim", + "DeviceSerialNumber": "35388", + "StationName": "MRC35388", + "PatientPosition": "HFS", + "ProcedureStepDescription": "RM_CEREBRAL", + "SoftwareVersions": "syngo_MR_B17", + "MRAcquisitionType": "3D", + "SeriesDescription": "T1w", + "ProtocolName": "T1w", + "ScanningSequence": "GR_IR", + "SequenceVariant": "SP_MP", + "ScanOptions": "IR", + "SequenceName": "_tfl3d1", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS2D" + ], + "SeriesNumber": 14, + "AcquisitionTime": "17:51:18.985000", + "AcquisitionNumber": 1, + "SliceThickness": 1, + "SAR": 0.100892, + "EchoTime": 0.00321, + "RepetitionTime": 2, + "InversionTime": 1, + "FlipAngle": 9, + "PartialFourier": 1, + "BaseResolution": 320, + "ShimSetting": [ + 8610, + -1264, + -7668, + 136, + 1049, + -206, + 552, + -575 + ], + "TxRefAmp": 306.258, + "PhaseResolution": 1, + "ReceiveCoilName": "NeckMatrix", + "PulseSequenceDetails": "%SiemensSeq%_tfl", + "PercentPhaseFOV": 81.25, + "PhaseEncodingSteps": 259, + "AcquisitionMatrixPE": 260, + "ReconMatrixPE": 320, + "ParallelReductionFactorInPlane": 2, + "PixelBandwidth": 150, + "DwellTime": 1.04e-05, + "ImageOrientationPatientDICOM": [ + -0.00339228, + 0.999994, + -0.000348966, + -0.0206658, + -0.000418998, + -0.999786 + ], + "InPlanePhaseEncodingDirectionDICOM": "ROW", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-vallHebron06/anat/sub-vallHebron06_space-other_T2star.json b/derivatives/data_preprocessed/sub-vallHebron06/anat/sub-vallHebron06_space-other_T2star.json index f73c39d2ac..decb79ec09 100644 --- a/derivatives/data_preprocessed/sub-vallHebron06/anat/sub-vallHebron06_space-other_T2star.json +++ b/derivatives/data_preprocessed/sub-vallHebron06/anat/sub-vallHebron06_space-other_T2star.json @@ -65,5 +65,9 @@ "InPlanePhaseEncodingDirectionDICOM": "COL", "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0", - "AcquisitionDuration": 290.0 + "AcquisitionDuration": 290.0, + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-vallHebron06/anat/sub-vallHebron06_space-other_T2w.json b/derivatives/data_preprocessed/sub-vallHebron06/anat/sub-vallHebron06_space-other_T2w.json index 7b7a90520a..080385cd9d 100644 --- a/derivatives/data_preprocessed/sub-vallHebron06/anat/sub-vallHebron06_space-other_T2w.json +++ b/derivatives/data_preprocessed/sub-vallHebron06/anat/sub-vallHebron06_space-other_T2w.json @@ -1,60 +1,72 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Siemens", - "ManufacturersModelName": "TrioTim", - "DeviceSerialNumber": "35388", - "StationName": "MRC35388", - "PatientPosition": "HFS", - "ProcedureStepDescription": "RM_CEREBRAL", - "SoftwareVersions": "syngo_MR_B17", - "MRAcquisitionType": "3D", - "SeriesDescription": "T2w", - "ProtocolName": "T2w", - "ScanningSequence": "SE", - "SequenceVariant": "SK_SP", - "ScanOptions": "PFP", - "SequenceName": "_spcR3d1_87", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS2D"], - "SeriesNumber": 15, - "AcquisitionTime": "17:56:21.245000", - "AcquisitionNumber": 1, - "SliceThickness": 0.8, - "SAR": 1.07865, - "EchoTime": 0.118, - "RepetitionTime": 2, - "FlipAngle": 180, - "PartialFourier": 1, - "BaseResolution": 320, - "ShimSetting": [ - 8686, - -1155, - -7953, - 133, - 836, - -44, - -41, - -387 ], - "TxRefAmp": 321.001, - "PhaseResolution": 1.0125, - "ReceiveCoilName": "NeckMatrix", - "PulseSequenceDetails": "%SiemensSeq%_tse_vfl", - "PercentPhaseFOV": 100, - "EchoTrainLength": 87, - "PhaseEncodingSteps": 247, - "AcquisitionMatrixPE": 324, - "ReconMatrixPE": 320, - "ParallelReductionFactorInPlane": 2, - "PixelBandwidth": 625, - "DwellTime": 2.5e-06, - "ImageOrientationPatientDICOM": [ - -0.00790349, - 0.999969, - 5.1033e-09, - -0.0482061, - -0.000381003, - -0.998837 ], - "InPlanePhaseEncodingDirectionDICOM": "ROW", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Siemens", + "ManufacturersModelName": "TrioTim", + "DeviceSerialNumber": "35388", + "StationName": "MRC35388", + "PatientPosition": "HFS", + "ProcedureStepDescription": "RM_CEREBRAL", + "SoftwareVersions": "syngo_MR_B17", + "MRAcquisitionType": "3D", + "SeriesDescription": "T2w", + "ProtocolName": "T2w", + "ScanningSequence": "SE", + "SequenceVariant": "SK_SP", + "ScanOptions": "PFP", + "SequenceName": "_spcR3d1_87", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS2D" + ], + "SeriesNumber": 15, + "AcquisitionTime": "17:56:21.245000", + "AcquisitionNumber": 1, + "SliceThickness": 0.8, + "SAR": 1.07865, + "EchoTime": 0.118, + "RepetitionTime": 2, + "FlipAngle": 180, + "PartialFourier": 1, + "BaseResolution": 320, + "ShimSetting": [ + 8686, + -1155, + -7953, + 133, + 836, + -44, + -41, + -387 + ], + "TxRefAmp": 321.001, + "PhaseResolution": 1.0125, + "ReceiveCoilName": "NeckMatrix", + "PulseSequenceDetails": "%SiemensSeq%_tse_vfl", + "PercentPhaseFOV": 100, + "EchoTrainLength": 87, + "PhaseEncodingSteps": 247, + "AcquisitionMatrixPE": 324, + "ReconMatrixPE": 320, + "ParallelReductionFactorInPlane": 2, + "PixelBandwidth": 625, + "DwellTime": 2.5e-06, + "ImageOrientationPatientDICOM": [ + -0.00790349, + 0.999969, + 5.1033e-09, + -0.0482061, + -0.000381003, + -0.998837 + ], + "InPlanePhaseEncodingDirectionDICOM": "ROW", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-vallHebron07/anat/sub-vallHebron07_flip-1_mt-on_space-other_MTS.json b/derivatives/data_preprocessed/sub-vallHebron07/anat/sub-vallHebron07_flip-1_mt-on_space-other_MTS.json index 898c8609af..67a487849e 100644 --- a/derivatives/data_preprocessed/sub-vallHebron07/anat/sub-vallHebron07_flip-1_mt-on_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-vallHebron07/anat/sub-vallHebron07_flip-1_mt-on_space-other_MTS.json @@ -1,59 +1,69 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Siemens", - "ManufacturersModelName": "TrioTim", - "DeviceSerialNumber": "35388", - "StationName": "MRC35388", - "PatientPosition": "HFS", - "ProcedureStepDescription": "RM_CEREBRAL", - "SoftwareVersions": "syngo_MR_B17", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-MT1", - "ProtocolName": "GRE-MT1", - "ScanningSequence": "GR", - "SequenceVariant": "MTC_SP", - "ScanOptions": "MT", - "SequenceName": "_fl3d1", - "ImageType": 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"MagneticFieldStrength": 3, + "Manufacturer": "Siemens", + "ManufacturersModelName": "TrioTim", + "DeviceSerialNumber": "35388", + "StationName": "MRC35388", + "PatientPosition": "HFS", + "ProcedureStepDescription": "RM_CEREBRAL", + "SoftwareVersions": "syngo_MR_B17", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-MT1", + "ProtocolName": "GRE-MT1", + "ScanningSequence": "GR", + "SequenceVariant": "MTC_SP", + "ScanOptions": "MT", + "SequenceName": "_fl3d1", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "DIS2D" + ], + "SeriesNumber": 16, + "AcquisitionTime": "16:09:51.207500", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SAR": 0.954565, + "EchoTime": 0.0035, + "RepetitionTime": 0.045, + "FlipAngle": 9, + "PartialFourier": 1, + "BaseResolution": 256, + "ShimSetting": [ + 8620, + -1321, + -7898, + -554, + 1240, + 1988, + -1, + -808 + ], + "TxRefAmp": 347.848, + "PhaseResolution": 1, + "ReceiveCoilName": "NeckMatrix", + "PulseSequenceDetails": "%SiemensSeq%_gre", + 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b/derivatives/data_preprocessed/sub-vallHebron07/anat/sub-vallHebron07_flip-2_mt-off_space-other_MTS.json @@ -1,58 +1,68 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Siemens", - "ManufacturersModelName": "TrioTim", - "DeviceSerialNumber": "35388", - "StationName": "MRC35388", - "PatientPosition": "HFS", - "ProcedureStepDescription": "RM_CEREBRAL", - "SoftwareVersions": "syngo_MR_B17", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-T1w", - "ProtocolName": "GRE-T1w", - "ScanningSequence": "GR", - "SequenceVariant": "SP", - "SequenceName": "_fl3d1", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "DIS2D"], - "SeriesNumber": 18, - "AcquisitionTime": "16:15:32.232500", - "AcquisitionNumber": 1, - "SliceThickness": 5, - "SAR": 0.0793715, - "EchoTime": 0.0035, - "RepetitionTime": 0.015, - "FlipAngle": 15, - "PartialFourier": 1, - "BaseResolution": 256, - "ShimSetting": [ - 8620, - -1321, - -7898, - -554, - 1240, - 1988, - -1, - -808 ], - "TxRefAmp": 347.848, - "PhaseResolution": 1, - "ReceiveCoilName": "NeckMatrix", - "PulseSequenceDetails": "%SiemensSeq%_gre", - "PercentPhaseFOV": 100, - "PhaseEncodingSteps": 255, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 256, - "ParallelReductionFactorInPlane": 2, - "PixelBandwidth": 260, - "DwellTime": 7.5e-06, - "ImageOrientationPatientDICOM": [ - 0.999198, - 0.00975058, - -0.0388332, - -1.5462e-08, - 0.969894, - 0.243529 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Siemens", + "ManufacturersModelName": "TrioTim", + "DeviceSerialNumber": "35388", + "StationName": "MRC35388", + "PatientPosition": "HFS", + "ProcedureStepDescription": "RM_CEREBRAL", + "SoftwareVersions": "syngo_MR_B17", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-T1w", + "ProtocolName": "GRE-T1w", + "ScanningSequence": "GR", + "SequenceVariant": "SP", + "SequenceName": "_fl3d1", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "DIS2D" + ], + "SeriesNumber": 18, + "AcquisitionTime": "16:15:32.232500", + "AcquisitionNumber": 1, + "SliceThickness": 5, + "SAR": 0.0793715, + "EchoTime": 0.0035, + "RepetitionTime": 0.015, + "FlipAngle": 15, + "PartialFourier": 1, + "BaseResolution": 256, + "ShimSetting": [ + 8620, + -1321, + -7898, + -554, + 1240, + 1988, + -1, + -808 + ], + "TxRefAmp": 347.848, + "PhaseResolution": 1, + "ReceiveCoilName": "NeckMatrix", + "PulseSequenceDetails": "%SiemensSeq%_gre", + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 255, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "ParallelReductionFactorInPlane": 2, + "PixelBandwidth": 260, + "DwellTime": 7.5e-06, + "ImageOrientationPatientDICOM": [ + 0.999198, + 0.00975058, + -0.0388332, + -1.5462e-08, + 0.969894, + 0.243529 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-vallHebron07/anat/sub-vallHebron07_space-other_T1w.json b/derivatives/data_preprocessed/sub-vallHebron07/anat/sub-vallHebron07_space-other_T1w.json index c70d16847a..0889dd45da 100644 --- a/derivatives/data_preprocessed/sub-vallHebron07/anat/sub-vallHebron07_space-other_T1w.json +++ b/derivatives/data_preprocessed/sub-vallHebron07/anat/sub-vallHebron07_space-other_T1w.json @@ -1,60 +1,72 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Siemens", - "ManufacturersModelName": "TrioTim", - "DeviceSerialNumber": "35388", - "StationName": "MRC35388", - "PatientPosition": "HFS", - "ProcedureStepDescription": "RM_CEREBRAL", - "SoftwareVersions": "syngo_MR_B17", - "MRAcquisitionType": "3D", - "SeriesDescription": "T1w", - "ProtocolName": "T1w", - "ScanningSequence": "GR_IR", - "SequenceVariant": "SP_MP", - "ScanOptions": "IR", - "SequenceName": "_tfl3d1", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS2D"], - "SeriesNumber": 12, - "AcquisitionTime": "15:51:30.945000", - "AcquisitionNumber": 1, - "SliceThickness": 1, - "SAR": 0.119145, - "EchoTime": 0.00321, - "RepetitionTime": 2, - "InversionTime": 1, - "FlipAngle": 9, - "PartialFourier": 1, - "BaseResolution": 320, - "ShimSetting": [ - 8618, - -1250, - -7765, - -251, - 1093, - 123, - 141, - -551 ], - "TxRefAmp": 311.501, - "PhaseResolution": 1, - "ReceiveCoilName": "NeckMatrix", - "PulseSequenceDetails": "%SiemensSeq%_tfl", - "PercentPhaseFOV": 81.25, - "PhaseEncodingSteps": 259, - "AcquisitionMatrixPE": 260, - "ReconMatrixPE": 320, - "ParallelReductionFactorInPlane": 2, - "PixelBandwidth": 150, - "DwellTime": 1.04e-05, - "ImageOrientationPatientDICOM": [ - -0.00718559, - 0.999974, - -2.20297e-08, - -0.0394775, - -0.000283699, - -0.99922 ], - "InPlanePhaseEncodingDirectionDICOM": "ROW", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Siemens", + "ManufacturersModelName": "TrioTim", + "DeviceSerialNumber": "35388", + "StationName": "MRC35388", + "PatientPosition": "HFS", + "ProcedureStepDescription": "RM_CEREBRAL", + "SoftwareVersions": "syngo_MR_B17", + "MRAcquisitionType": "3D", + "SeriesDescription": "T1w", + "ProtocolName": "T1w", + "ScanningSequence": "GR_IR", + "SequenceVariant": "SP_MP", + "ScanOptions": "IR", + "SequenceName": "_tfl3d1", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS2D" + ], + "SeriesNumber": 12, + "AcquisitionTime": "15:51:30.945000", + "AcquisitionNumber": 1, + "SliceThickness": 1, + "SAR": 0.119145, + "EchoTime": 0.00321, + "RepetitionTime": 2, + "InversionTime": 1, + "FlipAngle": 9, + "PartialFourier": 1, + "BaseResolution": 320, + "ShimSetting": [ + 8618, + -1250, + -7765, + -251, + 1093, + 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a/derivatives/data_preprocessed/sub-vallHebron07/anat/sub-vallHebron07_space-other_T2star.json +++ b/derivatives/data_preprocessed/sub-vallHebron07/anat/sub-vallHebron07_space-other_T2star.json @@ -65,5 +65,9 @@ "InPlanePhaseEncodingDirectionDICOM": "COL", "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0", - "AcquisitionDuration": 290.0 + "AcquisitionDuration": 290.0, + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-vallHebron07/anat/sub-vallHebron07_space-other_T2w.json b/derivatives/data_preprocessed/sub-vallHebron07/anat/sub-vallHebron07_space-other_T2w.json index a1d9f0078a..dd4fcfa9f8 100644 --- a/derivatives/data_preprocessed/sub-vallHebron07/anat/sub-vallHebron07_space-other_T2w.json +++ b/derivatives/data_preprocessed/sub-vallHebron07/anat/sub-vallHebron07_space-other_T2w.json @@ -1,60 +1,72 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "Manufacturer": "Siemens", - "ManufacturersModelName": "TrioTim", - "DeviceSerialNumber": "35388", - "StationName": "MRC35388", - "PatientPosition": "HFS", - "ProcedureStepDescription": "RM_CEREBRAL", - "SoftwareVersions": "syngo_MR_B17", - "MRAcquisitionType": "3D", - "SeriesDescription": "T2w", - "ProtocolName": "T2w", - "ScanningSequence": "SE", - "SequenceVariant": "SK_SP", - "ScanOptions": "PFP", - "SequenceName": "_spcR3d1_87", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS2D"], - "SeriesNumber": 13, - "AcquisitionTime": "15:57:0.215000", - "AcquisitionNumber": 1, - "SliceThickness": 0.8, - "SAR": 0.960124, - "EchoTime": 0.118, - "RepetitionTime": 2, - "FlipAngle": 150, - "PartialFourier": 1, - "BaseResolution": 320, - "ShimSetting": [ - 8686, - -1155, - -7953, - 133, - 836, - -44, - -41, - -387 ], - "TxRefAmp": 347.848, - "PhaseResolution": 1.0125, - "ReceiveCoilName": "NeckMatrix", - "PulseSequenceDetails": "%SiemensSeq%_tse_vfl", - "PercentPhaseFOV": 100, - "EchoTrainLength": 87, - "PhaseEncodingSteps": 247, - "AcquisitionMatrixPE": 324, - "ReconMatrixPE": 320, - "ParallelReductionFactorInPlane": 2, - "PixelBandwidth": 625, - "DwellTime": 2.5e-06, - "ImageOrientationPatientDICOM": [ - -0.00718559, - 0.999974, - -2.20297e-08, - -0.0394775, - -0.000283699, - -0.99922 ], - "InPlanePhaseEncodingDirectionDICOM": "ROW", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "Manufacturer": "Siemens", + "ManufacturersModelName": "TrioTim", + "DeviceSerialNumber": "35388", + "StationName": "MRC35388", + "PatientPosition": "HFS", + "ProcedureStepDescription": "RM_CEREBRAL", + "SoftwareVersions": "syngo_MR_B17", + "MRAcquisitionType": "3D", + "SeriesDescription": "T2w", + "ProtocolName": "T2w", + "ScanningSequence": "SE", + "SequenceVariant": "SK_SP", + "ScanOptions": "PFP", + "SequenceName": "_spcR3d1_87", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "NORM", + "DIS2D" + ], + "SeriesNumber": 13, + "AcquisitionTime": "15:57:0.215000", + "AcquisitionNumber": 1, + "SliceThickness": 0.8, + "SAR": 0.960124, + "EchoTime": 0.118, + "RepetitionTime": 2, + "FlipAngle": 150, + "PartialFourier": 1, + "BaseResolution": 320, + "ShimSetting": [ + 8686, + -1155, + -7953, + 133, + 836, + -44, + -41, + -387 + ], + "TxRefAmp": 347.848, + "PhaseResolution": 1.0125, + "ReceiveCoilName": "NeckMatrix", + "PulseSequenceDetails": "%SiemensSeq%_tse_vfl", + "PercentPhaseFOV": 100, + "EchoTrainLength": 87, + "PhaseEncodingSteps": 247, + "AcquisitionMatrixPE": 324, + "ReconMatrixPE": 320, + "ParallelReductionFactorInPlane": 2, + "PixelBandwidth": 625, + "DwellTime": 2.5e-06, + "ImageOrientationPatientDICOM": [ + -0.00718559, + 0.999974, + -2.20297e-08, + -0.0394775, + -0.000283699, + -0.99922 + ], + "InPlanePhaseEncodingDirectionDICOM": "ROW", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) GCC6.1.0", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-vuiisAchieva01/anat/sub-vuiisAchieva01_flip-1_mt-on_space-other_MTS.json b/derivatives/data_preprocessed/sub-vuiisAchieva01/anat/sub-vuiisAchieva01_flip-1_mt-on_space-other_MTS.json index 381310bdc3..506142214e 100644 --- a/derivatives/data_preprocessed/sub-vuiisAchieva01/anat/sub-vuiisAchieva01_flip-1_mt-on_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-vuiisAchieva01/anat/sub-vuiisAchieva01_flip-1_mt-on_space-other_MTS.json @@ -1,51 +1,62 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 127.76, - "Manufacturer": "Philips", - "ManufacturersModelName": "Achieva_dStream", - "InstitutionName": "Vanderbilt_Health_and_williamson", - "InstitutionalDepartmentName": "Research_MRI", - "InstitutionAddress": 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"ImageOrientationPatientDICOM": [ - 0.999573, - -1.90736e-10, - 0.0292342, - -0.00509181, - 0.984715, - 0.174099 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181022 GCC4.8.5" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 127.76, + "Manufacturer": "Philips", + "ManufacturersModelName": "Achieva_dStream", + "InstitutionName": "Vanderbilt_Health_and_williamson", + "InstitutionalDepartmentName": "Research_MRI", + "InstitutionAddress": "1161_21st_Ave_South", + "DeviceSerialNumber": "17240", + "StationName": "mr3tb", + "BodyPartExamined": "SPINE", + "PatientPosition": "HFS", + "SoftwareVersions": "5.3.0_5.3.0.3", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-MT", + "ProtocolName": "WIP_GRE-MT", + "ScanningSequence": "GR", + "SequenceVariant": "SP", + "ScanOptions": "PFF", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "FFE", + "M", + "FFE" + ], + "SeriesNumber": 601, + "AcquisitionTime": "09:41:24.970000", + "AcquisitionNumber": 6, + "PhilipsRescaleSlope": 1.81343, + "PhilipsRescaleIntercept": 0, + "PhilipsScaleSlope": 0.00067717, + "UsePhilipsFloatNotDisplayScaling": 1, + "SliceThickness": 5, + "SpacingBetweenSlices": 5, + "EchoTime": 0.002001, + "RepetitionTime": 0.057, + "FlipAngle": 9, + "CoilString": "MULTI_COIL", + "PartialFourier": 0.00390625, + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 256, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "PixelBandwidth": 261.113, + "ImageOrientationPatientDICOM": [ + 0.999573, + -1.90736e-10, + 0.0292342, + -0.00509181, + 0.984715, + 0.174099 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181022 GCC4.8.5", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-vuiisAchieva01/anat/sub-vuiisAchieva01_flip-2_mt-off_space-other_MTS.json b/derivatives/data_preprocessed/sub-vuiisAchieva01/anat/sub-vuiisAchieva01_flip-2_mt-off_space-other_MTS.json index cad0e59d68..1706f62a19 100644 --- a/derivatives/data_preprocessed/sub-vuiisAchieva01/anat/sub-vuiisAchieva01_flip-2_mt-off_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-vuiisAchieva01/anat/sub-vuiisAchieva01_flip-2_mt-off_space-other_MTS.json @@ -1,51 +1,62 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 127.76, - "Manufacturer": "Philips", - "ManufacturersModelName": "Achieva_dStream", - "InstitutionName": "Vanderbilt_Health_and_williamson", - "InstitutionalDepartmentName": "Research_MRI", - "InstitutionAddress": "1161_21st_Ave_South", - "DeviceSerialNumber": "17240", - "StationName": "mr3tb", - "BodyPartExamined": "SPINE", - "PatientPosition": "HFS", - "SoftwareVersions": "5.3.0_5.3.0.3", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-T1", - "ProtocolName": "WIP_GRE-T1", - "ScanningSequence": "GR", - "SequenceVariant": "SP", - "ScanOptions": "PFF", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "FFE", "M", "FFE"], - "SeriesNumber": 701, - "AcquisitionTime": "09:46:33.260000", - "AcquisitionNumber": 7, - "PhilipsRescaleSlope": 2.0696, - "PhilipsRescaleIntercept": 0, - "PhilipsScaleSlope": 0.00067717, - "UsePhilipsFloatNotDisplayScaling": 1, - "SliceThickness": 5, - "SpacingBetweenSlices": 5, - "EchoTime": 0.002001, - "RepetitionTime": 0.015, - "FlipAngle": 15, - "CoilString": "MULTI_COIL", - "PartialFourier": 0.00390625, - "PercentPhaseFOV": 100, - "PhaseEncodingSteps": 256, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 256, - "PixelBandwidth": 261.113, - "ImageOrientationPatientDICOM": [ - 0.999573, - -1.90736e-10, - 0.0292342, - -0.00509181, - 0.984715, - 0.174099 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181022 GCC4.8.5" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 127.76, + "Manufacturer": "Philips", + "ManufacturersModelName": "Achieva_dStream", + "InstitutionName": "Vanderbilt_Health_and_williamson", + "InstitutionalDepartmentName": "Research_MRI", + "InstitutionAddress": "1161_21st_Ave_South", + "DeviceSerialNumber": "17240", + "StationName": "mr3tb", + "BodyPartExamined": "SPINE", + "PatientPosition": "HFS", + "SoftwareVersions": "5.3.0_5.3.0.3", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-T1", + "ProtocolName": "WIP_GRE-T1", + "ScanningSequence": "GR", + "SequenceVariant": "SP", + "ScanOptions": "PFF", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "FFE", + "M", + "FFE" + ], + "SeriesNumber": 701, + "AcquisitionTime": "09:46:33.260000", + "AcquisitionNumber": 7, + "PhilipsRescaleSlope": 2.0696, + "PhilipsRescaleIntercept": 0, + "PhilipsScaleSlope": 0.00067717, + "UsePhilipsFloatNotDisplayScaling": 1, + "SliceThickness": 5, + "SpacingBetweenSlices": 5, + "EchoTime": 0.002001, + "RepetitionTime": 0.015, + "FlipAngle": 15, + "CoilString": "MULTI_COIL", + "PartialFourier": 0.00390625, + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 256, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "PixelBandwidth": 261.113, + "ImageOrientationPatientDICOM": [ + 0.999573, + -1.90736e-10, + 0.0292342, + -0.00509181, + 0.984715, + 0.174099 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181022 GCC4.8.5", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-vuiisAchieva01/anat/sub-vuiisAchieva01_space-other_T1w.json b/derivatives/data_preprocessed/sub-vuiisAchieva01/anat/sub-vuiisAchieva01_space-other_T1w.json index 10dba1213c..66ccb8127f 100644 --- a/derivatives/data_preprocessed/sub-vuiisAchieva01/anat/sub-vuiisAchieva01_space-other_T1w.json +++ b/derivatives/data_preprocessed/sub-vuiisAchieva01/anat/sub-vuiisAchieva01_space-other_T1w.json @@ -1,52 +1,64 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 127.758, - "Manufacturer": "Philips", - "ManufacturersModelName": "Achieva_dStream", - "InstitutionName": "Vanderbilt_Health_and_williamson", - "InstitutionalDepartmentName": "Research_MRI", - "InstitutionAddress": "1161_21st_Ave_South", - "DeviceSerialNumber": "17240", - "StationName": "mr3tb", - "BodyPartExamined": "SPINE", - "PatientPosition": "HFS", - "SoftwareVersions": "5.3.0_5.3.0.3", - "MRAcquisitionType": "3D", - "SeriesDescription": "T1w", - "ProtocolName": "WIP_T1w", - "ScanningSequence": "GR", - "SequenceVariant": "MP", - "ScanOptions": "OTHER", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "FFE", "M", "FFE"], - "SeriesNumber": 201, - "AcquisitionTime": "09:15:14.050000", - "AcquisitionNumber": 2, - "PhilipsRescaleSlope": 3.73822, - "PhilipsRescaleIntercept": 0, - "PhilipsScaleSlope": 0.00378727, - "UsePhilipsFloatNotDisplayScaling": 1, - "SliceThickness": 1, - "SpacingBetweenSlices": 1, - "EchoTime": 0.003551, - "RepetitionTime": 0.0076531, - "FlipAngle": 9, - "CoilString": "MULTI_COIL", - "PartialFourier": 0.76875, - "PercentPhaseFOV": 81.25, - "EchoTrainLength": 246, - "PhaseEncodingSteps": 320, - "AcquisitionMatrixPE": 320, - "ReconMatrixPE": 320, - "PixelBandwidth": 191.483, - "ImageOrientationPatientDICOM": [ - 0, - 1, - 0, - 0.0292342, - 0, - -0.999573 ], - "InPlanePhaseEncodingDirectionDICOM": "ROW", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181022 GCC4.8.5" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 127.758, + "Manufacturer": "Philips", + "ManufacturersModelName": "Achieva_dStream", + "InstitutionName": "Vanderbilt_Health_and_williamson", + "InstitutionalDepartmentName": "Research_MRI", + "InstitutionAddress": "1161_21st_Ave_South", + "DeviceSerialNumber": "17240", + "StationName": "mr3tb", + "BodyPartExamined": "SPINE", + "PatientPosition": "HFS", + "SoftwareVersions": "5.3.0_5.3.0.3", + "MRAcquisitionType": "3D", + "SeriesDescription": "T1w", + "ProtocolName": "WIP_T1w", + "ScanningSequence": "GR", + "SequenceVariant": "MP", + "ScanOptions": "OTHER", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "FFE", + "M", + "FFE" + ], + "SeriesNumber": 201, + "AcquisitionTime": "09:15:14.050000", + "AcquisitionNumber": 2, + "PhilipsRescaleSlope": 3.73822, + "PhilipsRescaleIntercept": 0, + "PhilipsScaleSlope": 0.00378727, + "UsePhilipsFloatNotDisplayScaling": 1, + "SliceThickness": 1, + "SpacingBetweenSlices": 1, + "EchoTime": 0.003551, + "RepetitionTime": 0.0076531, + "FlipAngle": 9, + "CoilString": "MULTI_COIL", + "PartialFourier": 0.76875, + "PercentPhaseFOV": 81.25, + "EchoTrainLength": 246, + "PhaseEncodingSteps": 320, + "AcquisitionMatrixPE": 320, + "ReconMatrixPE": 320, + "PixelBandwidth": 191.483, + "ImageOrientationPatientDICOM": [ + 0, + 1, + 0, + 0.0292342, + 0, + -0.999573 + ], + "InPlanePhaseEncodingDirectionDICOM": "ROW", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181022 GCC4.8.5", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-vuiisAchieva01/anat/sub-vuiisAchieva01_space-other_T2star.json b/derivatives/data_preprocessed/sub-vuiisAchieva01/anat/sub-vuiisAchieva01_space-other_T2star.json index a447959880..77261e450e 100644 --- a/derivatives/data_preprocessed/sub-vuiisAchieva01/anat/sub-vuiisAchieva01_space-other_T2star.json +++ b/derivatives/data_preprocessed/sub-vuiisAchieva01/anat/sub-vuiisAchieva01_space-other_T2star.json @@ -59,5 +59,9 @@ "InPlanePhaseEncodingDirectionDICOM": "COL", "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20181022 GCC4.8.5", - "AcquisitionDuration": 242.5 + "AcquisitionDuration": 242.5, + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-vuiisAchieva01/anat/sub-vuiisAchieva01_space-other_T2w.json b/derivatives/data_preprocessed/sub-vuiisAchieva01/anat/sub-vuiisAchieva01_space-other_T2w.json index 0bb0c40993..a9141d81ec 100644 --- a/derivatives/data_preprocessed/sub-vuiisAchieva01/anat/sub-vuiisAchieva01_space-other_T2w.json +++ b/derivatives/data_preprocessed/sub-vuiisAchieva01/anat/sub-vuiisAchieva01_space-other_T2w.json @@ -1,52 +1,64 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 127.758, - "Manufacturer": "Philips", - "ManufacturersModelName": "Achieva_dStream", - "InstitutionName": "Vanderbilt_Health_and_williamson", - "InstitutionalDepartmentName": "Research_MRI", - "InstitutionAddress": "1161_21st_Ave_South", - "DeviceSerialNumber": "17240", - "StationName": "mr3tb", - "BodyPartExamined": "SPINE", - "PatientPosition": "HFS", - "SoftwareVersions": "5.3.0_5.3.0.3", - "MRAcquisitionType": "3D", - "SeriesDescription": "T2w", - "ProtocolName": 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3, + "ImagingFrequency": 127.758, + "Manufacturer": "Philips", + "ManufacturersModelName": "Achieva_dStream", + "InstitutionName": "Vanderbilt_Health_and_williamson", + "InstitutionalDepartmentName": "Research_MRI", + "InstitutionAddress": "1161_21st_Ave_South", + "DeviceSerialNumber": "17240", + "StationName": "mr3tb", + "BodyPartExamined": "SPINE", + "PatientPosition": "HFS", + "SoftwareVersions": "5.3.0_5.3.0.3", + "MRAcquisitionType": "3D", + "SeriesDescription": "T2w", + "ProtocolName": "WIP_T2w", + "ScanningSequence": "SE", + "SequenceVariant": "SK", + "ScanOptions": "PFP", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "SE", + "M", + "SE" + ], + "SeriesNumber": 301, + "AcquisitionTime": "09:20:2.600000", + "AcquisitionNumber": 3, + "PhilipsRescaleSlope": 1.47448, + "PhilipsRescaleIntercept": 0, + "PhilipsScaleSlope": 0.00116704, + "UsePhilipsFloatNotDisplayScaling": 1, + "SliceThickness": 0.8, + "SpacingBetweenSlices": 0.8, + "EchoTime": 0.12, + "RepetitionTime": 3.5, + 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b/derivatives/data_preprocessed/sub-vuiisAchieva02/anat/sub-vuiisAchieva02_flip-1_mt-on_space-other_MTS.json @@ -1,51 +1,62 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 127.759, - "Manufacturer": "Philips", - "ManufacturersModelName": "Achieva_dStream", - "InstitutionName": "Vanderbilt_Health_and_williamson", - "InstitutionalDepartmentName": "Research_MRI", - "InstitutionAddress": "1161_21st_Ave_South", - "DeviceSerialNumber": "17240", - "StationName": "mr3tb", - "BodyPartExamined": "SPINE", - "PatientPosition": "HFS", - "SoftwareVersions": "5.3.0_5.3.0.3", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-MT", - "ProtocolName": "WIP_GRE-MT", - "ScanningSequence": "GR", - "SequenceVariant": "SP", - "ScanOptions": "PFF", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "FFE", "M", "FFE"], - "SeriesNumber": 501, - "AcquisitionTime": "09:01:19.640000", - "AcquisitionNumber": 5, - "PhilipsRescaleSlope": 2.01392, - "PhilipsRescaleIntercept": 0, - "PhilipsScaleSlope": 0.000647373, - "UsePhilipsFloatNotDisplayScaling": 1, - "SliceThickness": 5, - "SpacingBetweenSlices": 5, - "EchoTime": 0.002001, - "RepetitionTime": 0.057, - "FlipAngle": 9, - "CoilString": "MULTI_COIL", - "PartialFourier": 0.00390625, - "PercentPhaseFOV": 100, - "PhaseEncodingSteps": 256, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 256, - "PixelBandwidth": 261.113, - "ImageOrientationPatientDICOM": [ - 0.999862, - -0.00111498, - 0.0165872, - -0.000423641, - 0.995716, - 0.0924677 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181022 GCC4.8.5" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 127.759, + "Manufacturer": "Philips", + "ManufacturersModelName": "Achieva_dStream", + "InstitutionName": "Vanderbilt_Health_and_williamson", + "InstitutionalDepartmentName": "Research_MRI", + "InstitutionAddress": "1161_21st_Ave_South", + "DeviceSerialNumber": "17240", + "StationName": "mr3tb", + "BodyPartExamined": "SPINE", + "PatientPosition": "HFS", + "SoftwareVersions": "5.3.0_5.3.0.3", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-MT", + "ProtocolName": "WIP_GRE-MT", + "ScanningSequence": "GR", + "SequenceVariant": "SP", + "ScanOptions": "PFF", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "FFE", + "M", + "FFE" + ], + "SeriesNumber": 501, + "AcquisitionTime": "09:01:19.640000", + "AcquisitionNumber": 5, + "PhilipsRescaleSlope": 2.01392, + "PhilipsRescaleIntercept": 0, + "PhilipsScaleSlope": 0.000647373, + "UsePhilipsFloatNotDisplayScaling": 1, + "SliceThickness": 5, + "SpacingBetweenSlices": 5, + "EchoTime": 0.002001, + "RepetitionTime": 0.057, + "FlipAngle": 9, + "CoilString": "MULTI_COIL", + "PartialFourier": 0.00390625, + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 256, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "PixelBandwidth": 261.113, + "ImageOrientationPatientDICOM": [ + 0.999862, + -0.00111498, + 0.0165872, + -0.000423641, + 0.995716, + 0.0924677 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181022 GCC4.8.5", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-vuiisAchieva02/anat/sub-vuiisAchieva02_flip-2_mt-off_space-other_MTS.json b/derivatives/data_preprocessed/sub-vuiisAchieva02/anat/sub-vuiisAchieva02_flip-2_mt-off_space-other_MTS.json index b15d79c36d..b25bf5d3be 100644 --- a/derivatives/data_preprocessed/sub-vuiisAchieva02/anat/sub-vuiisAchieva02_flip-2_mt-off_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-vuiisAchieva02/anat/sub-vuiisAchieva02_flip-2_mt-off_space-other_MTS.json @@ -1,51 +1,62 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 127.759, - "Manufacturer": "Philips", - "ManufacturersModelName": "Achieva_dStream", - "InstitutionName": "Vanderbilt_Health_and_williamson", - "InstitutionalDepartmentName": "Research_MRI", - "InstitutionAddress": "1161_21st_Ave_South", - "DeviceSerialNumber": "17240", - "StationName": "mr3tb", - "BodyPartExamined": "SPINE", - "PatientPosition": "HFS", - "SoftwareVersions": "5.3.0_5.3.0.3", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-T1", - "ProtocolName": "WIP_GRE-T1", - "ScanningSequence": "GR", - "SequenceVariant": "SP", - "ScanOptions": "PFF", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "FFE", "M", "FFE"], - "SeriesNumber": 601, - "AcquisitionTime": "09:06:54.180000", - "AcquisitionNumber": 6, - "PhilipsRescaleSlope": 1.78217, - "PhilipsRescaleIntercept": 0, - "PhilipsScaleSlope": 0.000647373, - "UsePhilipsFloatNotDisplayScaling": 1, - "SliceThickness": 5, - "SpacingBetweenSlices": 5, - "EchoTime": 0.002001, - "RepetitionTime": 0.015, - "FlipAngle": 15, - "CoilString": "MULTI_COIL", - "PartialFourier": 0.00390625, - "PercentPhaseFOV": 100, - "PhaseEncodingSteps": 256, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 256, - "PixelBandwidth": 261.113, - "ImageOrientationPatientDICOM": [ - 0.999862, - -0.00111498, - 0.0165872, - -0.000423641, - 0.995716, - 0.0924677 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181022 GCC4.8.5" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 127.759, + "Manufacturer": "Philips", + "ManufacturersModelName": "Achieva_dStream", + "InstitutionName": "Vanderbilt_Health_and_williamson", + "InstitutionalDepartmentName": "Research_MRI", + "InstitutionAddress": "1161_21st_Ave_South", + "DeviceSerialNumber": "17240", + "StationName": "mr3tb", + "BodyPartExamined": "SPINE", + "PatientPosition": "HFS", + "SoftwareVersions": "5.3.0_5.3.0.3", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-T1", + "ProtocolName": "WIP_GRE-T1", + "ScanningSequence": "GR", + "SequenceVariant": "SP", + "ScanOptions": "PFF", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "FFE", + "M", + "FFE" + ], + "SeriesNumber": 601, + "AcquisitionTime": "09:06:54.180000", + "AcquisitionNumber": 6, + "PhilipsRescaleSlope": 1.78217, + "PhilipsRescaleIntercept": 0, + "PhilipsScaleSlope": 0.000647373, + "UsePhilipsFloatNotDisplayScaling": 1, + "SliceThickness": 5, + "SpacingBetweenSlices": 5, + "EchoTime": 0.002001, + "RepetitionTime": 0.015, + "FlipAngle": 15, + "CoilString": "MULTI_COIL", + "PartialFourier": 0.00390625, + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 256, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "PixelBandwidth": 261.113, + "ImageOrientationPatientDICOM": [ + 0.999862, + -0.00111498, + 0.0165872, + -0.000423641, + 0.995716, + 0.0924677 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181022 GCC4.8.5", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-vuiisAchieva02/anat/sub-vuiisAchieva02_space-other_T1w.json b/derivatives/data_preprocessed/sub-vuiisAchieva02/anat/sub-vuiisAchieva02_space-other_T1w.json index cac669329a..c36f762461 100644 --- a/derivatives/data_preprocessed/sub-vuiisAchieva02/anat/sub-vuiisAchieva02_space-other_T1w.json +++ b/derivatives/data_preprocessed/sub-vuiisAchieva02/anat/sub-vuiisAchieva02_space-other_T1w.json @@ -1,52 +1,64 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 127.758, - "Manufacturer": "Philips", - "ManufacturersModelName": "Achieva_dStream", - "InstitutionName": "Vanderbilt_Health_and_williamson", - "InstitutionalDepartmentName": "Research_MRI", - "InstitutionAddress": "1161_21st_Ave_South", - "DeviceSerialNumber": "17240", - "StationName": "mr3tb", - "BodyPartExamined": "SPINE", - "PatientPosition": "HFS", - "SoftwareVersions": "5.3.0_5.3.0.3", - "MRAcquisitionType": "3D", - "SeriesDescription": "T1w", - "ProtocolName": "WIP_T1w", - "ScanningSequence": "GR", - "SequenceVariant": "MP", - "ScanOptions": "OTHER", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "FFE", "M", "FFE"], - "SeriesNumber": 201, - "AcquisitionTime": "08:37:42.950000", - "AcquisitionNumber": 2, - "PhilipsRescaleSlope": 7.15873, - "PhilipsRescaleIntercept": 0, - "PhilipsScaleSlope": 0.0035017, - "UsePhilipsFloatNotDisplayScaling": 1, - "SliceThickness": 1, - "SpacingBetweenSlices": 1, - "EchoTime": 0.00355, - "RepetitionTime": 0.0076261, - "FlipAngle": 9, - "CoilString": "MULTI_COIL", - "PartialFourier": 0.76875, - "PercentPhaseFOV": 81.25, - "EchoTrainLength": 246, - "PhaseEncodingSteps": 320, - "AcquisitionMatrixPE": 320, - "ReconMatrixPE": 320, - "PixelBandwidth": 191.483, - "ImageOrientationPatientDICOM": [ - 0, - 1, - 0, - 0.0386546, - 0, - -0.999253 ], - "InPlanePhaseEncodingDirectionDICOM": "ROW", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181022 GCC4.8.5" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 127.758, + "Manufacturer": "Philips", + "ManufacturersModelName": "Achieva_dStream", + "InstitutionName": "Vanderbilt_Health_and_williamson", + "InstitutionalDepartmentName": "Research_MRI", + "InstitutionAddress": "1161_21st_Ave_South", + "DeviceSerialNumber": "17240", + "StationName": "mr3tb", + "BodyPartExamined": "SPINE", + "PatientPosition": "HFS", + "SoftwareVersions": "5.3.0_5.3.0.3", + "MRAcquisitionType": "3D", + "SeriesDescription": "T1w", + "ProtocolName": "WIP_T1w", + "ScanningSequence": "GR", + "SequenceVariant": "MP", + "ScanOptions": "OTHER", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "FFE", + "M", + "FFE" + ], + "SeriesNumber": 201, + "AcquisitionTime": "08:37:42.950000", + "AcquisitionNumber": 2, + "PhilipsRescaleSlope": 7.15873, + "PhilipsRescaleIntercept": 0, + "PhilipsScaleSlope": 0.0035017, + "UsePhilipsFloatNotDisplayScaling": 1, + "SliceThickness": 1, + "SpacingBetweenSlices": 1, + "EchoTime": 0.00355, + "RepetitionTime": 0.0076261, + "FlipAngle": 9, + "CoilString": "MULTI_COIL", + "PartialFourier": 0.76875, + "PercentPhaseFOV": 81.25, + "EchoTrainLength": 246, + "PhaseEncodingSteps": 320, + "AcquisitionMatrixPE": 320, + "ReconMatrixPE": 320, + "PixelBandwidth": 191.483, + "ImageOrientationPatientDICOM": [ + 0, + 1, + 0, + 0.0386546, + 0, + -0.999253 + ], + "InPlanePhaseEncodingDirectionDICOM": "ROW", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181022 GCC4.8.5", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-vuiisAchieva02/anat/sub-vuiisAchieva02_space-other_T2star.json b/derivatives/data_preprocessed/sub-vuiisAchieva02/anat/sub-vuiisAchieva02_space-other_T2star.json index 201854ce8a..94c447f5ce 100644 --- a/derivatives/data_preprocessed/sub-vuiisAchieva02/anat/sub-vuiisAchieva02_space-other_T2star.json +++ b/derivatives/data_preprocessed/sub-vuiisAchieva02/anat/sub-vuiisAchieva02_space-other_T2star.json @@ -59,5 +59,9 @@ "InPlanePhaseEncodingDirectionDICOM": "COL", "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20181022 GCC4.8.5", - "AcquisitionDuration": 242.5 + "AcquisitionDuration": 242.5, + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-vuiisAchieva02/anat/sub-vuiisAchieva02_space-other_T2w.json b/derivatives/data_preprocessed/sub-vuiisAchieva02/anat/sub-vuiisAchieva02_space-other_T2w.json index 0e826fa0ef..b50719cd19 100644 --- a/derivatives/data_preprocessed/sub-vuiisAchieva02/anat/sub-vuiisAchieva02_space-other_T2w.json +++ b/derivatives/data_preprocessed/sub-vuiisAchieva02/anat/sub-vuiisAchieva02_space-other_T2w.json @@ -1,52 +1,64 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 127.758, - "Manufacturer": "Philips", - "ManufacturersModelName": "Achieva_dStream", - "InstitutionName": "Vanderbilt_Health_and_williamson", - "InstitutionalDepartmentName": "Research_MRI", - "InstitutionAddress": "1161_21st_Ave_South", - "DeviceSerialNumber": "17240", - "StationName": "mr3tb", - "BodyPartExamined": "SPINE", - "PatientPosition": "HFS", - "SoftwareVersions": "5.3.0_5.3.0.3", - "MRAcquisitionType": "3D", - "SeriesDescription": "T2w", - "ProtocolName": "WIP_T2w", - "ScanningSequence": "SE", - "SequenceVariant": "SK", - "ScanOptions": "PFP", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "SE", "M", "SE"], - "SeriesNumber": 301, - "AcquisitionTime": "08:45:12.360000", - "AcquisitionNumber": 3, - "PhilipsRescaleSlope": 1.33871, - "PhilipsRescaleIntercept": 0, - "PhilipsScaleSlope": 0.00106736, - "UsePhilipsFloatNotDisplayScaling": 1, - "SliceThickness": 0.8, - "SpacingBetweenSlices": 0.8, - "EchoTime": 0.12, - "RepetitionTime": 3.5, - "FlipAngle": 90, - "CoilString": "MULTI_COIL", - "PartialFourier": 0.291139, - "PercentPhaseFOV": 92.5, - "EchoTrainLength": 92, - "PhaseEncodingSteps": 316, - "AcquisitionMatrixPE": 316, - "ReconMatrixPE": 320, - "PixelBandwidth": 366.784, - "ImageOrientationPatientDICOM": [ - 0, - 1, - 0, - 0.0386546, - 0, - -0.999253 ], - "InPlanePhaseEncodingDirectionDICOM": "ROW", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181022 GCC4.8.5" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 127.758, + "Manufacturer": "Philips", + "ManufacturersModelName": "Achieva_dStream", + "InstitutionName": "Vanderbilt_Health_and_williamson", + "InstitutionalDepartmentName": "Research_MRI", + "InstitutionAddress": "1161_21st_Ave_South", + "DeviceSerialNumber": "17240", + "StationName": "mr3tb", + "BodyPartExamined": "SPINE", + "PatientPosition": "HFS", + "SoftwareVersions": "5.3.0_5.3.0.3", + "MRAcquisitionType": "3D", + "SeriesDescription": "T2w", + "ProtocolName": "WIP_T2w", + "ScanningSequence": "SE", + "SequenceVariant": "SK", + "ScanOptions": "PFP", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "SE", + "M", + "SE" + ], + "SeriesNumber": 301, + "AcquisitionTime": "08:45:12.360000", + "AcquisitionNumber": 3, + "PhilipsRescaleSlope": 1.33871, + "PhilipsRescaleIntercept": 0, + "PhilipsScaleSlope": 0.00106736, + "UsePhilipsFloatNotDisplayScaling": 1, + "SliceThickness": 0.8, + "SpacingBetweenSlices": 0.8, + "EchoTime": 0.12, + "RepetitionTime": 3.5, + "FlipAngle": 90, + "CoilString": "MULTI_COIL", + "PartialFourier": 0.291139, + "PercentPhaseFOV": 92.5, + "EchoTrainLength": 92, + "PhaseEncodingSteps": 316, + "AcquisitionMatrixPE": 316, + "ReconMatrixPE": 320, + "PixelBandwidth": 366.784, + "ImageOrientationPatientDICOM": [ + 0, + 1, + 0, + 0.0386546, + 0, + -0.999253 + ], + "InPlanePhaseEncodingDirectionDICOM": "ROW", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181022 GCC4.8.5", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-vuiisAchieva03/anat/sub-vuiisAchieva03_flip-1_mt-on_space-other_MTS.json b/derivatives/data_preprocessed/sub-vuiisAchieva03/anat/sub-vuiisAchieva03_flip-1_mt-on_space-other_MTS.json index 4da7199e95..22f5a815df 100644 --- a/derivatives/data_preprocessed/sub-vuiisAchieva03/anat/sub-vuiisAchieva03_flip-1_mt-on_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-vuiisAchieva03/anat/sub-vuiisAchieva03_flip-1_mt-on_space-other_MTS.json @@ -1,52 +1,63 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 127.758, - "Manufacturer": "Philips", - "ManufacturersModelName": "Achieva_dStream", - "InstitutionName": "Vanderbilt_Health_and_williamson", - "InstitutionalDepartmentName": "Research_MRI", - "InstitutionAddress": "1161_21st_Ave_South", - "DeviceSerialNumber": "17240", - "StationName": "mr3tb", - "BodyPartExamined": "SPINE", - "PatientPosition": "HFS", - "ProcedureStepDescription": "Smith_236640", - "SoftwareVersions": "5.3.0_5.3.0.3", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-MT", - "ProtocolName": "WIP_GRE-MT", - "ScanningSequence": "GR", - "SequenceVariant": "SP", - "ScanOptions": "PFF", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "FFE", "M", "FFE"], - "SeriesNumber": 501, - "AcquisitionTime": "15:33:56.120000", - "AcquisitionNumber": 5, - "PhilipsRescaleSlope": 1.82515, - "PhilipsRescaleIntercept": 0, - "PhilipsScaleSlope": 0.000638663, - "UsePhilipsFloatNotDisplayScaling": 1, - "SliceThickness": 5, - "SpacingBetweenSlices": 5, - "EchoTime": 0.002001, - "RepetitionTime": 0.057, - "FlipAngle": 9, - "CoilString": "MULTI_COIL", - "PartialFourier": 0.00390625, - "PercentPhaseFOV": 100, - "PhaseEncodingSteps": 256, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 256, - "PixelBandwidth": 261.113, - "ImageOrientationPatientDICOM": [ - 0.999483, - -4.76321e-10, - 0.0321534, - -0.0075414, - 0.972105, - 0.234423 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181022 GCC4.8.5" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 127.758, + "Manufacturer": "Philips", + "ManufacturersModelName": "Achieva_dStream", + "InstitutionName": "Vanderbilt_Health_and_williamson", + "InstitutionalDepartmentName": "Research_MRI", + "InstitutionAddress": "1161_21st_Ave_South", + "DeviceSerialNumber": "17240", + "StationName": "mr3tb", + "BodyPartExamined": "SPINE", + "PatientPosition": "HFS", + "ProcedureStepDescription": "Smith_236640", + "SoftwareVersions": "5.3.0_5.3.0.3", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-MT", + "ProtocolName": "WIP_GRE-MT", + "ScanningSequence": "GR", + "SequenceVariant": "SP", + "ScanOptions": "PFF", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "FFE", + "M", + "FFE" + ], + "SeriesNumber": 501, + "AcquisitionTime": "15:33:56.120000", + "AcquisitionNumber": 5, + "PhilipsRescaleSlope": 1.82515, + "PhilipsRescaleIntercept": 0, + "PhilipsScaleSlope": 0.000638663, + "UsePhilipsFloatNotDisplayScaling": 1, + "SliceThickness": 5, + "SpacingBetweenSlices": 5, + "EchoTime": 0.002001, + "RepetitionTime": 0.057, + "FlipAngle": 9, + "CoilString": "MULTI_COIL", + "PartialFourier": 0.00390625, + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 256, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "PixelBandwidth": 261.113, + "ImageOrientationPatientDICOM": [ + 0.999483, + -4.76321e-10, + 0.0321534, + -0.0075414, + 0.972105, + 0.234423 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181022 GCC4.8.5", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-vuiisAchieva03/anat/sub-vuiisAchieva03_flip-2_mt-off_space-other_MTS.json b/derivatives/data_preprocessed/sub-vuiisAchieva03/anat/sub-vuiisAchieva03_flip-2_mt-off_space-other_MTS.json index 062a49774e..deaf059d40 100644 --- a/derivatives/data_preprocessed/sub-vuiisAchieva03/anat/sub-vuiisAchieva03_flip-2_mt-off_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-vuiisAchieva03/anat/sub-vuiisAchieva03_flip-2_mt-off_space-other_MTS.json @@ -1,52 +1,63 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 127.758, - "Manufacturer": "Philips", - "ManufacturersModelName": "Achieva_dStream", - "InstitutionName": "Vanderbilt_Health_and_williamson", - "InstitutionalDepartmentName": "Research_MRI", - "InstitutionAddress": "1161_21st_Ave_South", - "DeviceSerialNumber": "17240", - "StationName": "mr3tb", - "BodyPartExamined": "SPINE", - "PatientPosition": "HFS", - "ProcedureStepDescription": "Smith_236640", - "SoftwareVersions": "5.3.0_5.3.0.3", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-T1", - "ProtocolName": "WIP_GRE-T1", - "ScanningSequence": "GR", - "SequenceVariant": "SP", - "ScanOptions": "PFF", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "FFE", "M", "FFE"], - "SeriesNumber": 601, - "AcquisitionTime": "15:38:53.140000", - "AcquisitionNumber": 6, - "PhilipsRescaleSlope": 1.83565, - "PhilipsRescaleIntercept": 0, - "PhilipsScaleSlope": 0.000638663, - "UsePhilipsFloatNotDisplayScaling": 1, - "SliceThickness": 5, - "SpacingBetweenSlices": 5, - "EchoTime": 0.002001, - "RepetitionTime": 0.015, - "FlipAngle": 15, - "CoilString": "MULTI_COIL", - "PartialFourier": 0.00390625, - "PercentPhaseFOV": 100, - "PhaseEncodingSteps": 256, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 256, - "PixelBandwidth": 261.113, - "ImageOrientationPatientDICOM": [ - 0.999483, - -4.76321e-10, - 0.0321534, - -0.0075414, - 0.972105, - 0.234423 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181022 GCC4.8.5" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 127.758, + "Manufacturer": "Philips", + "ManufacturersModelName": "Achieva_dStream", + "InstitutionName": "Vanderbilt_Health_and_williamson", + "InstitutionalDepartmentName": "Research_MRI", + "InstitutionAddress": "1161_21st_Ave_South", + "DeviceSerialNumber": "17240", + "StationName": "mr3tb", + "BodyPartExamined": "SPINE", + "PatientPosition": "HFS", + "ProcedureStepDescription": "Smith_236640", + "SoftwareVersions": "5.3.0_5.3.0.3", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-T1", + "ProtocolName": "WIP_GRE-T1", + "ScanningSequence": "GR", + "SequenceVariant": "SP", + "ScanOptions": "PFF", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "FFE", + "M", + "FFE" + ], + "SeriesNumber": 601, + "AcquisitionTime": "15:38:53.140000", + "AcquisitionNumber": 6, + "PhilipsRescaleSlope": 1.83565, + "PhilipsRescaleIntercept": 0, + "PhilipsScaleSlope": 0.000638663, + "UsePhilipsFloatNotDisplayScaling": 1, + "SliceThickness": 5, + "SpacingBetweenSlices": 5, + "EchoTime": 0.002001, + "RepetitionTime": 0.015, + "FlipAngle": 15, + "CoilString": "MULTI_COIL", + "PartialFourier": 0.00390625, + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 256, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "PixelBandwidth": 261.113, + "ImageOrientationPatientDICOM": [ + 0.999483, + -4.76321e-10, + 0.0321534, + -0.0075414, + 0.972105, + 0.234423 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181022 GCC4.8.5", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-vuiisAchieva03/anat/sub-vuiisAchieva03_space-other_T1w.json b/derivatives/data_preprocessed/sub-vuiisAchieva03/anat/sub-vuiisAchieva03_space-other_T1w.json index c4ab7b3775..b91b0dac02 100644 --- a/derivatives/data_preprocessed/sub-vuiisAchieva03/anat/sub-vuiisAchieva03_space-other_T1w.json +++ b/derivatives/data_preprocessed/sub-vuiisAchieva03/anat/sub-vuiisAchieva03_space-other_T1w.json @@ -1,53 +1,65 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 127.758, - "Manufacturer": "Philips", - "ManufacturersModelName": "Achieva_dStream", - "InstitutionName": "Vanderbilt_Health_and_williamson", - "InstitutionalDepartmentName": "Research_MRI", - "InstitutionAddress": "1161_21st_Ave_South", - "DeviceSerialNumber": "17240", - "StationName": "mr3tb", - "BodyPartExamined": "SPINE", - "PatientPosition": "HFS", - "ProcedureStepDescription": "Smith_236640", - "SoftwareVersions": "5.3.0_5.3.0.3", - "MRAcquisitionType": "3D", - "SeriesDescription": "T1w", - "ProtocolName": "WIP_T1w", - "ScanningSequence": "GR", - "SequenceVariant": "MP", - "ScanOptions": "OTHER", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "FFE", "M", "FFE"], - "SeriesNumber": 201, - "AcquisitionTime": "15:12:37.130000", - "AcquisitionNumber": 2, - "PhilipsRescaleSlope": 3.29939, - "PhilipsRescaleIntercept": 0, - "PhilipsScaleSlope": 0.00355976, - "UsePhilipsFloatNotDisplayScaling": 1, - "SliceThickness": 1, - "SpacingBetweenSlices": 1, - "EchoTime": 0.003542, - "RepetitionTime": 0.0076257, - "FlipAngle": 9, - "CoilString": "MULTI_COIL", - "PartialFourier": 0.76875, - "PercentPhaseFOV": 81.25, - "EchoTrainLength": 246, - "PhaseEncodingSteps": 320, - "AcquisitionMatrixPE": 320, - "ReconMatrixPE": 320, - "PixelBandwidth": 191.483, - "ImageOrientationPatientDICOM": [ - 0, - 1, - 0, - 0.0321534, - 0, - -0.999483 ], - "InPlanePhaseEncodingDirectionDICOM": "ROW", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181022 GCC4.8.5" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 127.758, + "Manufacturer": "Philips", + "ManufacturersModelName": "Achieva_dStream", + "InstitutionName": "Vanderbilt_Health_and_williamson", + "InstitutionalDepartmentName": "Research_MRI", + "InstitutionAddress": "1161_21st_Ave_South", + "DeviceSerialNumber": "17240", + "StationName": "mr3tb", + "BodyPartExamined": "SPINE", + "PatientPosition": "HFS", + "ProcedureStepDescription": "Smith_236640", + "SoftwareVersions": "5.3.0_5.3.0.3", + "MRAcquisitionType": "3D", + "SeriesDescription": "T1w", + "ProtocolName": "WIP_T1w", + "ScanningSequence": "GR", + "SequenceVariant": "MP", + "ScanOptions": "OTHER", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "FFE", + "M", + "FFE" + ], + "SeriesNumber": 201, + "AcquisitionTime": "15:12:37.130000", + "AcquisitionNumber": 2, + "PhilipsRescaleSlope": 3.29939, + "PhilipsRescaleIntercept": 0, + "PhilipsScaleSlope": 0.00355976, + "UsePhilipsFloatNotDisplayScaling": 1, + "SliceThickness": 1, + "SpacingBetweenSlices": 1, + "EchoTime": 0.003542, + "RepetitionTime": 0.0076257, + "FlipAngle": 9, + "CoilString": "MULTI_COIL", + "PartialFourier": 0.76875, + "PercentPhaseFOV": 81.25, + "EchoTrainLength": 246, + "PhaseEncodingSteps": 320, + "AcquisitionMatrixPE": 320, + "ReconMatrixPE": 320, + "PixelBandwidth": 191.483, + "ImageOrientationPatientDICOM": [ + 0, + 1, + 0, + 0.0321534, + 0, + -0.999483 + ], + "InPlanePhaseEncodingDirectionDICOM": "ROW", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181022 GCC4.8.5", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-vuiisAchieva03/anat/sub-vuiisAchieva03_space-other_T2star.json b/derivatives/data_preprocessed/sub-vuiisAchieva03/anat/sub-vuiisAchieva03_space-other_T2star.json index 932c06b3e1..38eee3dda9 100644 --- a/derivatives/data_preprocessed/sub-vuiisAchieva03/anat/sub-vuiisAchieva03_space-other_T2star.json +++ b/derivatives/data_preprocessed/sub-vuiisAchieva03/anat/sub-vuiisAchieva03_space-other_T2star.json @@ -60,5 +60,9 @@ "InPlanePhaseEncodingDirectionDICOM": "COL", "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20181022 GCC4.8.5", - "AcquisitionDuration": 242.5 + "AcquisitionDuration": 242.5, + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-vuiisAchieva03/anat/sub-vuiisAchieva03_space-other_T2w.json b/derivatives/data_preprocessed/sub-vuiisAchieva03/anat/sub-vuiisAchieva03_space-other_T2w.json index 8c23ec3628..e76339d82c 100644 --- a/derivatives/data_preprocessed/sub-vuiisAchieva03/anat/sub-vuiisAchieva03_space-other_T2w.json +++ b/derivatives/data_preprocessed/sub-vuiisAchieva03/anat/sub-vuiisAchieva03_space-other_T2w.json @@ -1,53 +1,65 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 127.758, - "Manufacturer": "Philips", - "ManufacturersModelName": "Achieva_dStream", - "InstitutionName": "Vanderbilt_Health_and_williamson", - "InstitutionalDepartmentName": "Research_MRI", - "InstitutionAddress": "1161_21st_Ave_South", - "DeviceSerialNumber": "17240", - "StationName": "mr3tb", - "BodyPartExamined": "SPINE", - "PatientPosition": "HFS", - "ProcedureStepDescription": "Smith_236640", - "SoftwareVersions": "5.3.0_5.3.0.3", - "MRAcquisitionType": "3D", - "SeriesDescription": "T2w", - "ProtocolName": "WIP_T2w", - "ScanningSequence": "SE", - "SequenceVariant": "SK", - "ScanOptions": "PFP", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "SE", "M", "SE"], - "SeriesNumber": 301, - "AcquisitionTime": "15:18:31.170000", - "AcquisitionNumber": 3, - "PhilipsRescaleSlope": 1.34017, - "PhilipsRescaleIntercept": 0, - "PhilipsScaleSlope": 0.000994023, - "UsePhilipsFloatNotDisplayScaling": 1, - "SliceThickness": 0.8, - "SpacingBetweenSlices": 0.8, - "EchoTime": 0.12, - "RepetitionTime": 3.5, - "FlipAngle": 90, - "CoilString": "MULTI_COIL", - "PartialFourier": 0.291139, - "PercentPhaseFOV": 92.5, - "EchoTrainLength": 92, - "PhaseEncodingSteps": 316, - "AcquisitionMatrixPE": 316, - "ReconMatrixPE": 320, - "PixelBandwidth": 366.784, - "ImageOrientationPatientDICOM": [ - 0, - 1, - 0, - 0.0321534, - 0, - -0.999483 ], - "InPlanePhaseEncodingDirectionDICOM": "ROW", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181022 GCC4.8.5" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 127.758, + "Manufacturer": "Philips", + "ManufacturersModelName": "Achieva_dStream", + "InstitutionName": "Vanderbilt_Health_and_williamson", + "InstitutionalDepartmentName": "Research_MRI", + "InstitutionAddress": "1161_21st_Ave_South", + "DeviceSerialNumber": "17240", + "StationName": "mr3tb", + "BodyPartExamined": "SPINE", + "PatientPosition": "HFS", + "ProcedureStepDescription": "Smith_236640", + "SoftwareVersions": "5.3.0_5.3.0.3", + "MRAcquisitionType": "3D", + "SeriesDescription": "T2w", + "ProtocolName": "WIP_T2w", + "ScanningSequence": "SE", + "SequenceVariant": "SK", + "ScanOptions": "PFP", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "SE", + "M", + "SE" + ], + "SeriesNumber": 301, + "AcquisitionTime": "15:18:31.170000", + "AcquisitionNumber": 3, + "PhilipsRescaleSlope": 1.34017, + "PhilipsRescaleIntercept": 0, + "PhilipsScaleSlope": 0.000994023, + "UsePhilipsFloatNotDisplayScaling": 1, + "SliceThickness": 0.8, + "SpacingBetweenSlices": 0.8, + "EchoTime": 0.12, + "RepetitionTime": 3.5, + "FlipAngle": 90, + "CoilString": "MULTI_COIL", + "PartialFourier": 0.291139, + "PercentPhaseFOV": 92.5, + "EchoTrainLength": 92, + "PhaseEncodingSteps": 316, + "AcquisitionMatrixPE": 316, + "ReconMatrixPE": 320, + "PixelBandwidth": 366.784, + "ImageOrientationPatientDICOM": [ + 0, + 1, + 0, + 0.0321534, + 0, + -0.999483 + ], + "InPlanePhaseEncodingDirectionDICOM": "ROW", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181022 GCC4.8.5", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-vuiisAchieva04/anat/sub-vuiisAchieva04_flip-1_mt-on_space-other_MTS.json b/derivatives/data_preprocessed/sub-vuiisAchieva04/anat/sub-vuiisAchieva04_flip-1_mt-on_space-other_MTS.json index d54d82f172..c71b7b0c90 100644 --- a/derivatives/data_preprocessed/sub-vuiisAchieva04/anat/sub-vuiisAchieva04_flip-1_mt-on_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-vuiisAchieva04/anat/sub-vuiisAchieva04_flip-1_mt-on_space-other_MTS.json @@ -1,52 +1,63 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 127.759, - "Manufacturer": "Philips", - "ManufacturersModelName": "Achieva_dStream", - "InstitutionName": "Vanderbilt_Health_and_williamson", - "InstitutionalDepartmentName": "Research_MRI", - "InstitutionAddress": "1161_21st_Ave_South", - "DeviceSerialNumber": "17240", - "StationName": "mr3tb", - "BodyPartExamined": "SPINE", - "PatientPosition": "HFS", - "ProcedureStepDescription": "Smith_236674", - "SoftwareVersions": "5.3.0_5.3.0.3", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-MT", - "ProtocolName": "WIP_GRE-MT", - "ScanningSequence": "GR", - "SequenceVariant": "SP", - "ScanOptions": "PFF", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "FFE", "M", "FFE"], - "SeriesNumber": 501, - "AcquisitionTime": "11:30:43.760000", - "AcquisitionNumber": 5, - "PhilipsRescaleSlope": 1.7138, - "PhilipsRescaleIntercept": 0, - "PhilipsScaleSlope": 0.000642011, - "UsePhilipsFloatNotDisplayScaling": 1, - "SliceThickness": 5, - "SpacingBetweenSlices": 5, - "EchoTime": 0.002001, - "RepetitionTime": 0.057, - "FlipAngle": 9, - "CoilString": "MULTI_COIL", - "PartialFourier": 0.00390625, - "PercentPhaseFOV": 100, - "PhaseEncodingSteps": 256, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 256, - "PixelBandwidth": 261.113, - "ImageOrientationPatientDICOM": [ - 0.99939, - 7.90538e-10, - -0.0349319, - 0.0111129, - 0.948047, - 0.317935 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181022 GCC4.8.5" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 127.759, + "Manufacturer": "Philips", + "ManufacturersModelName": "Achieva_dStream", + "InstitutionName": "Vanderbilt_Health_and_williamson", + "InstitutionalDepartmentName": "Research_MRI", + "InstitutionAddress": "1161_21st_Ave_South", + "DeviceSerialNumber": "17240", + "StationName": "mr3tb", + "BodyPartExamined": "SPINE", + "PatientPosition": "HFS", + "ProcedureStepDescription": "Smith_236674", + "SoftwareVersions": "5.3.0_5.3.0.3", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-MT", + "ProtocolName": "WIP_GRE-MT", + "ScanningSequence": "GR", + "SequenceVariant": "SP", + "ScanOptions": "PFF", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "FFE", + "M", + "FFE" + ], + "SeriesNumber": 501, + "AcquisitionTime": "11:30:43.760000", + "AcquisitionNumber": 5, + "PhilipsRescaleSlope": 1.7138, + "PhilipsRescaleIntercept": 0, + "PhilipsScaleSlope": 0.000642011, + "UsePhilipsFloatNotDisplayScaling": 1, + "SliceThickness": 5, + "SpacingBetweenSlices": 5, + "EchoTime": 0.002001, + "RepetitionTime": 0.057, + "FlipAngle": 9, + "CoilString": "MULTI_COIL", + "PartialFourier": 0.00390625, + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 256, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "PixelBandwidth": 261.113, + "ImageOrientationPatientDICOM": [ + 0.99939, + 7.90538e-10, + -0.0349319, + 0.0111129, + 0.948047, + 0.317935 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181022 GCC4.8.5", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-vuiisAchieva04/anat/sub-vuiisAchieva04_flip-2_mt-off_space-other_MTS.json b/derivatives/data_preprocessed/sub-vuiisAchieva04/anat/sub-vuiisAchieva04_flip-2_mt-off_space-other_MTS.json index 94e5596285..9b332e03ef 100644 --- a/derivatives/data_preprocessed/sub-vuiisAchieva04/anat/sub-vuiisAchieva04_flip-2_mt-off_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-vuiisAchieva04/anat/sub-vuiisAchieva04_flip-2_mt-off_space-other_MTS.json @@ -1,52 +1,63 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 127.759, - "Manufacturer": "Philips", - "ManufacturersModelName": "Achieva_dStream", - "InstitutionName": "Vanderbilt_Health_and_williamson", - "InstitutionalDepartmentName": "Research_MRI", - "InstitutionAddress": "1161_21st_Ave_South", - "DeviceSerialNumber": "17240", - "StationName": "mr3tb", - "BodyPartExamined": "SPINE", - "PatientPosition": "HFS", - "ProcedureStepDescription": "Smith_236674", - "SoftwareVersions": "5.3.0_5.3.0.3", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-T1", - "ProtocolName": "WIP_GRE-T1", - "ScanningSequence": "GR", - "SequenceVariant": "SP", - "ScanOptions": "PFF", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "FFE", "M", "FFE"], - "SeriesNumber": 601, - "AcquisitionTime": "11:35:40.940000", - "AcquisitionNumber": 6, - "PhilipsRescaleSlope": 1.97485, - "PhilipsRescaleIntercept": 0, - "PhilipsScaleSlope": 0.000642011, - "UsePhilipsFloatNotDisplayScaling": 1, - "SliceThickness": 5, - "SpacingBetweenSlices": 5, - "EchoTime": 0.002001, - "RepetitionTime": 0.015, - "FlipAngle": 15, - "CoilString": "MULTI_COIL", - "PartialFourier": 0.00390625, - "PercentPhaseFOV": 100, - "PhaseEncodingSteps": 256, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 256, - "PixelBandwidth": 261.113, - "ImageOrientationPatientDICOM": [ - 0.99939, - 7.90538e-10, - -0.0349319, - 0.0111129, - 0.948047, - 0.317935 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181022 GCC4.8.5" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 127.759, + "Manufacturer": "Philips", + "ManufacturersModelName": "Achieva_dStream", + "InstitutionName": "Vanderbilt_Health_and_williamson", + "InstitutionalDepartmentName": "Research_MRI", + "InstitutionAddress": "1161_21st_Ave_South", + "DeviceSerialNumber": "17240", + "StationName": "mr3tb", + "BodyPartExamined": "SPINE", + "PatientPosition": "HFS", + "ProcedureStepDescription": "Smith_236674", + "SoftwareVersions": "5.3.0_5.3.0.3", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-T1", + "ProtocolName": "WIP_GRE-T1", + "ScanningSequence": "GR", + "SequenceVariant": "SP", + "ScanOptions": "PFF", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "FFE", + "M", + "FFE" + ], + "SeriesNumber": 601, + "AcquisitionTime": "11:35:40.940000", + "AcquisitionNumber": 6, + "PhilipsRescaleSlope": 1.97485, + "PhilipsRescaleIntercept": 0, + "PhilipsScaleSlope": 0.000642011, + "UsePhilipsFloatNotDisplayScaling": 1, + "SliceThickness": 5, + "SpacingBetweenSlices": 5, + "EchoTime": 0.002001, + "RepetitionTime": 0.015, + "FlipAngle": 15, + "CoilString": "MULTI_COIL", + "PartialFourier": 0.00390625, + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 256, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "PixelBandwidth": 261.113, + "ImageOrientationPatientDICOM": [ + 0.99939, + 7.90538e-10, + -0.0349319, + 0.0111129, + 0.948047, + 0.317935 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181022 GCC4.8.5", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-vuiisAchieva04/anat/sub-vuiisAchieva04_space-other_T1w.json b/derivatives/data_preprocessed/sub-vuiisAchieva04/anat/sub-vuiisAchieva04_space-other_T1w.json index 99c46d6e2f..826a811923 100644 --- a/derivatives/data_preprocessed/sub-vuiisAchieva04/anat/sub-vuiisAchieva04_space-other_T1w.json +++ b/derivatives/data_preprocessed/sub-vuiisAchieva04/anat/sub-vuiisAchieva04_space-other_T1w.json @@ -1,53 +1,65 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 127.758, - "Manufacturer": "Philips", - "ManufacturersModelName": "Achieva_dStream", - "InstitutionName": "Vanderbilt_Health_and_williamson", - "InstitutionalDepartmentName": "Research_MRI", - "InstitutionAddress": "1161_21st_Ave_South", - "DeviceSerialNumber": "17240", - "StationName": "mr3tb", - "BodyPartExamined": "SPINE", - "PatientPosition": "HFS", - "ProcedureStepDescription": "Smith_236674", - "SoftwareVersions": "5.3.0_5.3.0.3", - "MRAcquisitionType": "3D", - "SeriesDescription": "T1w", - "ProtocolName": "WIP_T1w", - "ScanningSequence": "GR", - "SequenceVariant": "MP", - "ScanOptions": "OTHER", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "FFE", "M", "FFE"], - "SeriesNumber": 201, - "AcquisitionTime": "11:11:58.240000", - "AcquisitionNumber": 2, - "PhilipsRescaleSlope": 3.50598, - "PhilipsRescaleIntercept": 0, - "PhilipsScaleSlope": 0.00364159, - "UsePhilipsFloatNotDisplayScaling": 1, - "SliceThickness": 1, - "SpacingBetweenSlices": 1, - "EchoTime": 0.003556, - "RepetitionTime": 0.0076651, - "FlipAngle": 9, - "CoilString": "MULTI_COIL", - "PartialFourier": 0.76875, - "PercentPhaseFOV": 81.25, - "EchoTrainLength": 246, - "PhaseEncodingSteps": 320, - "AcquisitionMatrixPE": 320, - "ReconMatrixPE": 320, - "PixelBandwidth": 191.483, - "ImageOrientationPatientDICOM": [ - 0, - 1, - 0, - -0.0349319, - 0, - -0.99939 ], - "InPlanePhaseEncodingDirectionDICOM": "ROW", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181022 GCC4.8.5" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 127.758, + "Manufacturer": "Philips", + "ManufacturersModelName": "Achieva_dStream", + "InstitutionName": "Vanderbilt_Health_and_williamson", + "InstitutionalDepartmentName": "Research_MRI", + "InstitutionAddress": "1161_21st_Ave_South", + "DeviceSerialNumber": "17240", + "StationName": "mr3tb", + "BodyPartExamined": "SPINE", + "PatientPosition": "HFS", + "ProcedureStepDescription": "Smith_236674", + "SoftwareVersions": "5.3.0_5.3.0.3", + "MRAcquisitionType": "3D", + "SeriesDescription": "T1w", + "ProtocolName": "WIP_T1w", + "ScanningSequence": "GR", + "SequenceVariant": "MP", + "ScanOptions": "OTHER", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "FFE", + "M", + "FFE" + ], + "SeriesNumber": 201, + "AcquisitionTime": "11:11:58.240000", + "AcquisitionNumber": 2, + "PhilipsRescaleSlope": 3.50598, + "PhilipsRescaleIntercept": 0, + "PhilipsScaleSlope": 0.00364159, + "UsePhilipsFloatNotDisplayScaling": 1, + "SliceThickness": 1, + "SpacingBetweenSlices": 1, + "EchoTime": 0.003556, + "RepetitionTime": 0.0076651, + "FlipAngle": 9, + "CoilString": "MULTI_COIL", + "PartialFourier": 0.76875, + "PercentPhaseFOV": 81.25, + "EchoTrainLength": 246, + "PhaseEncodingSteps": 320, + "AcquisitionMatrixPE": 320, + "ReconMatrixPE": 320, + "PixelBandwidth": 191.483, + "ImageOrientationPatientDICOM": [ + 0, + 1, + 0, + -0.0349319, + 0, + -0.99939 + ], + "InPlanePhaseEncodingDirectionDICOM": "ROW", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181022 GCC4.8.5", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-vuiisAchieva04/anat/sub-vuiisAchieva04_space-other_T2star.json b/derivatives/data_preprocessed/sub-vuiisAchieva04/anat/sub-vuiisAchieva04_space-other_T2star.json index 9d475ddcd1..64ff7f1dd4 100644 --- a/derivatives/data_preprocessed/sub-vuiisAchieva04/anat/sub-vuiisAchieva04_space-other_T2star.json +++ b/derivatives/data_preprocessed/sub-vuiisAchieva04/anat/sub-vuiisAchieva04_space-other_T2star.json @@ -60,5 +60,9 @@ "InPlanePhaseEncodingDirectionDICOM": "COL", "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20181022 GCC4.8.5", - "AcquisitionDuration": 242.5 + "AcquisitionDuration": 242.5, + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-vuiisAchieva04/anat/sub-vuiisAchieva04_space-other_T2w.json b/derivatives/data_preprocessed/sub-vuiisAchieva04/anat/sub-vuiisAchieva04_space-other_T2w.json index 40bcf17468..68ceb54fdb 100644 --- a/derivatives/data_preprocessed/sub-vuiisAchieva04/anat/sub-vuiisAchieva04_space-other_T2w.json +++ b/derivatives/data_preprocessed/sub-vuiisAchieva04/anat/sub-vuiisAchieva04_space-other_T2w.json @@ -1,53 +1,65 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 127.758, - "Manufacturer": "Philips", - "ManufacturersModelName": "Achieva_dStream", - "InstitutionName": "Vanderbilt_Health_and_williamson", - "InstitutionalDepartmentName": "Research_MRI", - "InstitutionAddress": "1161_21st_Ave_South", - "DeviceSerialNumber": "17240", - "StationName": "mr3tb", - "BodyPartExamined": "SPINE", - "PatientPosition": "HFS", - "ProcedureStepDescription": "Smith_236674", - "SoftwareVersions": "5.3.0_5.3.0.3", - "MRAcquisitionType": "3D", - "SeriesDescription": "T2w", - "ProtocolName": "WIP_T2w", - "ScanningSequence": "SE", - "SequenceVariant": "SK", - "ScanOptions": "PFP", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "SE", "M", "SE"], - "SeriesNumber": 301, - "AcquisitionTime": "11:17:30.130000", - "AcquisitionNumber": 3, - "PhilipsRescaleSlope": 1.39536, - "PhilipsRescaleIntercept": 0, - "PhilipsScaleSlope": 0.00099654, - "UsePhilipsFloatNotDisplayScaling": 1, - "SliceThickness": 0.8, - "SpacingBetweenSlices": 0.8, - "EchoTime": 0.12, - "RepetitionTime": 3.5, - "FlipAngle": 90, - "CoilString": "MULTI_COIL", - "PartialFourier": 0.291139, - "PercentPhaseFOV": 92.5, - "EchoTrainLength": 92, - "PhaseEncodingSteps": 316, - "AcquisitionMatrixPE": 316, - "ReconMatrixPE": 320, - "PixelBandwidth": 366.784, - "ImageOrientationPatientDICOM": [ - 0, - 1, - 0, - -0.0349319, - 0, - -0.99939 ], - "InPlanePhaseEncodingDirectionDICOM": "ROW", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181022 GCC4.8.5" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 127.758, + "Manufacturer": "Philips", + "ManufacturersModelName": "Achieva_dStream", + "InstitutionName": "Vanderbilt_Health_and_williamson", + "InstitutionalDepartmentName": "Research_MRI", + "InstitutionAddress": "1161_21st_Ave_South", + "DeviceSerialNumber": "17240", + "StationName": "mr3tb", + "BodyPartExamined": "SPINE", + "PatientPosition": "HFS", + "ProcedureStepDescription": "Smith_236674", + "SoftwareVersions": "5.3.0_5.3.0.3", + "MRAcquisitionType": "3D", + "SeriesDescription": "T2w", + "ProtocolName": "WIP_T2w", + "ScanningSequence": "SE", + "SequenceVariant": "SK", + "ScanOptions": "PFP", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "SE", + "M", + "SE" + ], + "SeriesNumber": 301, + "AcquisitionTime": "11:17:30.130000", + "AcquisitionNumber": 3, + "PhilipsRescaleSlope": 1.39536, + "PhilipsRescaleIntercept": 0, + "PhilipsScaleSlope": 0.00099654, + "UsePhilipsFloatNotDisplayScaling": 1, + "SliceThickness": 0.8, + "SpacingBetweenSlices": 0.8, + "EchoTime": 0.12, + "RepetitionTime": 3.5, + "FlipAngle": 90, + "CoilString": "MULTI_COIL", + "PartialFourier": 0.291139, + "PercentPhaseFOV": 92.5, + "EchoTrainLength": 92, + "PhaseEncodingSteps": 316, + "AcquisitionMatrixPE": 316, + "ReconMatrixPE": 320, + "PixelBandwidth": 366.784, + "ImageOrientationPatientDICOM": [ + 0, + 1, + 0, + -0.0349319, + 0, + -0.99939 + ], + "InPlanePhaseEncodingDirectionDICOM": "ROW", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181022 GCC4.8.5", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-vuiisAchieva05/anat/sub-vuiisAchieva05_flip-1_mt-on_space-other_MTS.json b/derivatives/data_preprocessed/sub-vuiisAchieva05/anat/sub-vuiisAchieva05_flip-1_mt-on_space-other_MTS.json index 2c3689091b..7aeeff8799 100644 --- a/derivatives/data_preprocessed/sub-vuiisAchieva05/anat/sub-vuiisAchieva05_flip-1_mt-on_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-vuiisAchieva05/anat/sub-vuiisAchieva05_flip-1_mt-on_space-other_MTS.json @@ -1,51 +1,62 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 127.758, - "Manufacturer": "Philips", - "ManufacturersModelName": "Achieva_dStream", - "InstitutionName": "Vanderbilt_Health_and_williamson", - "InstitutionalDepartmentName": "Research_MRI", - "InstitutionAddress": "1161_21st_Ave_South", - "DeviceSerialNumber": "17240", - "StationName": "mr3tb", - "BodyPartExamined": "SPINE", - "PatientPosition": "HFS", - "SoftwareVersions": "5.3.0_5.3.0.3", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-MT", - "ProtocolName": "WIP_GRE-MT", - "ScanningSequence": "GR", - "SequenceVariant": "SP", - "ScanOptions": "PFF", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "FFE", "M", "FFE"], - "SeriesNumber": 501, - "AcquisitionTime": "09:24:17.460000", - "AcquisitionNumber": 5, - "PhilipsRescaleSlope": 1.78608, - "PhilipsRescaleIntercept": 0, - "PhilipsScaleSlope": 0.000577911, - "UsePhilipsFloatNotDisplayScaling": 1, - "SliceThickness": 5, - "SpacingBetweenSlices": 5, - "EchoTime": 0.002001, - "RepetitionTime": 0.057, - "FlipAngle": 9, - "CoilString": "MULTI_COIL", - "PartialFourier": 0.00390625, - "PercentPhaseFOV": 100, - "PhaseEncodingSteps": 256, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 256, - "PixelBandwidth": 261.113, - "ImageOrientationPatientDICOM": [ - 0.998831, - 0.00441787, - -0.0481409, - 0.00682586, - 0.972951, - 0.230911 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181022 GCC4.8.5" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 127.758, + "Manufacturer": "Philips", + "ManufacturersModelName": "Achieva_dStream", + "InstitutionName": "Vanderbilt_Health_and_williamson", + "InstitutionalDepartmentName": "Research_MRI", + "InstitutionAddress": "1161_21st_Ave_South", + "DeviceSerialNumber": "17240", + "StationName": "mr3tb", + "BodyPartExamined": "SPINE", + "PatientPosition": "HFS", + "SoftwareVersions": "5.3.0_5.3.0.3", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-MT", + "ProtocolName": "WIP_GRE-MT", + "ScanningSequence": "GR", + "SequenceVariant": "SP", + "ScanOptions": "PFF", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "FFE", + "M", + "FFE" + ], + "SeriesNumber": 501, + "AcquisitionTime": "09:24:17.460000", + "AcquisitionNumber": 5, + "PhilipsRescaleSlope": 1.78608, + "PhilipsRescaleIntercept": 0, + "PhilipsScaleSlope": 0.000577911, + "UsePhilipsFloatNotDisplayScaling": 1, + "SliceThickness": 5, + "SpacingBetweenSlices": 5, + "EchoTime": 0.002001, + "RepetitionTime": 0.057, + "FlipAngle": 9, + "CoilString": "MULTI_COIL", + "PartialFourier": 0.00390625, + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 256, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "PixelBandwidth": 261.113, + "ImageOrientationPatientDICOM": [ + 0.998831, + 0.00441787, + -0.0481409, + 0.00682586, + 0.972951, + 0.230911 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181022 GCC4.8.5", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-vuiisAchieva05/anat/sub-vuiisAchieva05_flip-2_mt-off_space-other_MTS.json b/derivatives/data_preprocessed/sub-vuiisAchieva05/anat/sub-vuiisAchieva05_flip-2_mt-off_space-other_MTS.json index 659f832fbf..991a0ebe6d 100644 --- a/derivatives/data_preprocessed/sub-vuiisAchieva05/anat/sub-vuiisAchieva05_flip-2_mt-off_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-vuiisAchieva05/anat/sub-vuiisAchieva05_flip-2_mt-off_space-other_MTS.json @@ -1,51 +1,62 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 127.758, - "Manufacturer": "Philips", - "ManufacturersModelName": "Achieva_dStream", - "InstitutionName": "Vanderbilt_Health_and_williamson", - "InstitutionalDepartmentName": "Research_MRI", - "InstitutionAddress": "1161_21st_Ave_South", - "DeviceSerialNumber": "17240", - "StationName": "mr3tb", - "BodyPartExamined": "SPINE", - "PatientPosition": "HFS", - "SoftwareVersions": "5.3.0_5.3.0.3", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-T1", - "ProtocolName": "WIP_GRE-T1", - "ScanningSequence": "GR", - "SequenceVariant": "SP", - "ScanOptions": "PFF", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "FFE", "M", "FFE"], - "SeriesNumber": 601, - "AcquisitionTime": "09:29:13.550000", - "AcquisitionNumber": 6, - "PhilipsRescaleSlope": 1.87375, - "PhilipsRescaleIntercept": 0, - "PhilipsScaleSlope": 0.000577911, - "UsePhilipsFloatNotDisplayScaling": 1, - "SliceThickness": 5, - "SpacingBetweenSlices": 5, - "EchoTime": 0.002001, - "RepetitionTime": 0.015, - "FlipAngle": 15, - "CoilString": "MULTI_COIL", - "PartialFourier": 0.00390625, - "PercentPhaseFOV": 100, - "PhaseEncodingSteps": 256, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 256, - "PixelBandwidth": 261.113, - "ImageOrientationPatientDICOM": [ - 0.998831, - 0.00441787, - -0.0481409, - 0.00682586, - 0.972951, - 0.230911 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181022 GCC4.8.5" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 127.758, + "Manufacturer": "Philips", + "ManufacturersModelName": "Achieva_dStream", + "InstitutionName": "Vanderbilt_Health_and_williamson", + "InstitutionalDepartmentName": "Research_MRI", + "InstitutionAddress": "1161_21st_Ave_South", + "DeviceSerialNumber": "17240", + "StationName": "mr3tb", + "BodyPartExamined": "SPINE", + "PatientPosition": "HFS", + "SoftwareVersions": "5.3.0_5.3.0.3", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-T1", + "ProtocolName": "WIP_GRE-T1", + "ScanningSequence": "GR", + "SequenceVariant": "SP", + "ScanOptions": "PFF", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "FFE", + "M", + "FFE" + ], + "SeriesNumber": 601, + "AcquisitionTime": "09:29:13.550000", + "AcquisitionNumber": 6, + "PhilipsRescaleSlope": 1.87375, + "PhilipsRescaleIntercept": 0, + "PhilipsScaleSlope": 0.000577911, + "UsePhilipsFloatNotDisplayScaling": 1, + "SliceThickness": 5, + "SpacingBetweenSlices": 5, + "EchoTime": 0.002001, + "RepetitionTime": 0.015, + "FlipAngle": 15, + "CoilString": "MULTI_COIL", + "PartialFourier": 0.00390625, + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 256, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "PixelBandwidth": 261.113, + "ImageOrientationPatientDICOM": [ + 0.998831, + 0.00441787, + -0.0481409, + 0.00682586, + 0.972951, + 0.230911 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181022 GCC4.8.5", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-vuiisAchieva05/anat/sub-vuiisAchieva05_space-other_T1w.json b/derivatives/data_preprocessed/sub-vuiisAchieva05/anat/sub-vuiisAchieva05_space-other_T1w.json index c6f7aa44c9..f12c946353 100644 --- a/derivatives/data_preprocessed/sub-vuiisAchieva05/anat/sub-vuiisAchieva05_space-other_T1w.json +++ b/derivatives/data_preprocessed/sub-vuiisAchieva05/anat/sub-vuiisAchieva05_space-other_T1w.json @@ -1,52 +1,64 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 127.757, - "Manufacturer": "Philips", - "ManufacturersModelName": "Achieva_dStream", - "InstitutionName": "Vanderbilt_Health_and_williamson", - "InstitutionalDepartmentName": "Research_MRI", - "InstitutionAddress": "1161_21st_Ave_South", - "DeviceSerialNumber": "17240", - "StationName": "mr3tb", - "BodyPartExamined": "SPINE", - "PatientPosition": "HFS", - "SoftwareVersions": "5.3.0_5.3.0.3", - "MRAcquisitionType": "3D", - "SeriesDescription": "T1w", - "ProtocolName": "WIP_T1w", - "ScanningSequence": "GR", - "SequenceVariant": "MP", - "ScanOptions": "OTHER", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "FFE", "M", "FFE"], - "SeriesNumber": 201, - "AcquisitionTime": "09:03:8.150000", - "AcquisitionNumber": 2, - "PhilipsRescaleSlope": 3.57582, - "PhilipsRescaleIntercept": 0, - "PhilipsScaleSlope": 0.00321128, - "UsePhilipsFloatNotDisplayScaling": 1, - "SliceThickness": 1, - "SpacingBetweenSlices": 1, - "EchoTime": 0.003552, - "RepetitionTime": 0.0076568, - "FlipAngle": 9, - "CoilString": "MULTI_COIL", - "PartialFourier": 0.76875, - "PercentPhaseFOV": 81.25, - "EchoTrainLength": 246, - "PhaseEncodingSteps": 320, - "AcquisitionMatrixPE": 320, - "ReconMatrixPE": 320, - "PixelBandwidth": 191.483, - "ImageOrientationPatientDICOM": [ - 0, - 1, - 0, - -0.0289006, - 0, - -0.999582 ], - "InPlanePhaseEncodingDirectionDICOM": "ROW", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181022 GCC4.8.5" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 127.757, + "Manufacturer": "Philips", + "ManufacturersModelName": "Achieva_dStream", + "InstitutionName": "Vanderbilt_Health_and_williamson", + "InstitutionalDepartmentName": "Research_MRI", + "InstitutionAddress": "1161_21st_Ave_South", + "DeviceSerialNumber": "17240", + "StationName": "mr3tb", + "BodyPartExamined": "SPINE", + "PatientPosition": "HFS", + "SoftwareVersions": "5.3.0_5.3.0.3", + "MRAcquisitionType": "3D", + "SeriesDescription": "T1w", + "ProtocolName": "WIP_T1w", + "ScanningSequence": "GR", + "SequenceVariant": "MP", + "ScanOptions": "OTHER", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "FFE", + "M", + "FFE" + ], + "SeriesNumber": 201, + "AcquisitionTime": "09:03:8.150000", + "AcquisitionNumber": 2, + "PhilipsRescaleSlope": 3.57582, + "PhilipsRescaleIntercept": 0, + "PhilipsScaleSlope": 0.00321128, + "UsePhilipsFloatNotDisplayScaling": 1, + "SliceThickness": 1, + "SpacingBetweenSlices": 1, + "EchoTime": 0.003552, + "RepetitionTime": 0.0076568, + "FlipAngle": 9, + "CoilString": "MULTI_COIL", + "PartialFourier": 0.76875, + "PercentPhaseFOV": 81.25, + "EchoTrainLength": 246, + "PhaseEncodingSteps": 320, + "AcquisitionMatrixPE": 320, + "ReconMatrixPE": 320, + "PixelBandwidth": 191.483, + "ImageOrientationPatientDICOM": [ + 0, + 1, + 0, + -0.0289006, + 0, + -0.999582 + ], + "InPlanePhaseEncodingDirectionDICOM": "ROW", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181022 GCC4.8.5", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-vuiisAchieva05/anat/sub-vuiisAchieva05_space-other_T2star.json b/derivatives/data_preprocessed/sub-vuiisAchieva05/anat/sub-vuiisAchieva05_space-other_T2star.json index 8987aadb0f..0fd688f4df 100644 --- a/derivatives/data_preprocessed/sub-vuiisAchieva05/anat/sub-vuiisAchieva05_space-other_T2star.json +++ b/derivatives/data_preprocessed/sub-vuiisAchieva05/anat/sub-vuiisAchieva05_space-other_T2star.json @@ -59,5 +59,9 @@ "InPlanePhaseEncodingDirectionDICOM": "COL", "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20181022 GCC4.8.5", - "AcquisitionDuration": 242.5 + "AcquisitionDuration": 242.5, + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-vuiisAchieva05/anat/sub-vuiisAchieva05_space-other_T2w.json b/derivatives/data_preprocessed/sub-vuiisAchieva05/anat/sub-vuiisAchieva05_space-other_T2w.json index be4334b403..8860043f40 100644 --- a/derivatives/data_preprocessed/sub-vuiisAchieva05/anat/sub-vuiisAchieva05_space-other_T2w.json +++ b/derivatives/data_preprocessed/sub-vuiisAchieva05/anat/sub-vuiisAchieva05_space-other_T2w.json @@ -1,52 +1,64 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 127.757, - "Manufacturer": "Philips", - "ManufacturersModelName": "Achieva_dStream", - "InstitutionName": "Vanderbilt_Health_and_williamson", - "InstitutionalDepartmentName": "Research_MRI", - "InstitutionAddress": "1161_21st_Ave_South", - "DeviceSerialNumber": "17240", - "StationName": "mr3tb", - "BodyPartExamined": "SPINE", - "PatientPosition": "HFS", - "SoftwareVersions": "5.3.0_5.3.0.3", - "MRAcquisitionType": "3D", - "SeriesDescription": "T2w", - "ProtocolName": "WIP_T2w", - "ScanningSequence": "SE", - "SequenceVariant": "SK", - "ScanOptions": "PFP", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "SE", "M", "SE"], - "SeriesNumber": 301, - "AcquisitionTime": "09:08:26.150000", - "AcquisitionNumber": 3, - "PhilipsRescaleSlope": 1.42076, - "PhilipsRescaleIntercept": 0, - "PhilipsScaleSlope": 0.000915343, - "UsePhilipsFloatNotDisplayScaling": 1, - "SliceThickness": 0.8, - "SpacingBetweenSlices": 0.8, - "EchoTime": 0.12, - "RepetitionTime": 3.5, - "FlipAngle": 90, - "CoilString": "MULTI_COIL", - "PartialFourier": 0.291139, - "PercentPhaseFOV": 92.5, - "EchoTrainLength": 92, - "PhaseEncodingSteps": 316, - "AcquisitionMatrixPE": 316, - "ReconMatrixPE": 320, - "PixelBandwidth": 366.784, - "ImageOrientationPatientDICOM": [ - 0, - 1, - 0, - -0.0486753, - 0, - -0.998815 ], - "InPlanePhaseEncodingDirectionDICOM": "ROW", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181022 GCC4.8.5" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 127.757, + "Manufacturer": "Philips", + "ManufacturersModelName": "Achieva_dStream", + "InstitutionName": "Vanderbilt_Health_and_williamson", + "InstitutionalDepartmentName": "Research_MRI", + "InstitutionAddress": "1161_21st_Ave_South", + "DeviceSerialNumber": "17240", + "StationName": "mr3tb", + "BodyPartExamined": "SPINE", + "PatientPosition": "HFS", + "SoftwareVersions": "5.3.0_5.3.0.3", + "MRAcquisitionType": "3D", + "SeriesDescription": "T2w", + "ProtocolName": "WIP_T2w", + "ScanningSequence": "SE", + "SequenceVariant": "SK", + "ScanOptions": "PFP", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "SE", + "M", + "SE" + ], + "SeriesNumber": 301, + "AcquisitionTime": "09:08:26.150000", + "AcquisitionNumber": 3, + "PhilipsRescaleSlope": 1.42076, + "PhilipsRescaleIntercept": 0, + "PhilipsScaleSlope": 0.000915343, + "UsePhilipsFloatNotDisplayScaling": 1, + "SliceThickness": 0.8, + "SpacingBetweenSlices": 0.8, + "EchoTime": 0.12, + "RepetitionTime": 3.5, + "FlipAngle": 90, + "CoilString": "MULTI_COIL", + "PartialFourier": 0.291139, + "PercentPhaseFOV": 92.5, + "EchoTrainLength": 92, + "PhaseEncodingSteps": 316, + "AcquisitionMatrixPE": 316, + "ReconMatrixPE": 320, + "PixelBandwidth": 366.784, + "ImageOrientationPatientDICOM": [ + 0, + 1, + 0, + -0.0486753, + 0, + -0.998815 + ], + "InPlanePhaseEncodingDirectionDICOM": "ROW", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181022 GCC4.8.5", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-vuiisAchieva06/anat/sub-vuiisAchieva06_flip-1_mt-on_space-other_MTS.json b/derivatives/data_preprocessed/sub-vuiisAchieva06/anat/sub-vuiisAchieva06_flip-1_mt-on_space-other_MTS.json index f34f9aab42..5040d9db9e 100644 --- a/derivatives/data_preprocessed/sub-vuiisAchieva06/anat/sub-vuiisAchieva06_flip-1_mt-on_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-vuiisAchieva06/anat/sub-vuiisAchieva06_flip-1_mt-on_space-other_MTS.json @@ -1,52 +1,63 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 127.758, - "Manufacturer": "Philips", - "ManufacturersModelName": "Achieva_dStream", - "InstitutionName": "Vanderbilt_Health_and_williamson", - "InstitutionalDepartmentName": "Research_MRI", - "InstitutionAddress": "1161_21st_Ave_South", - "DeviceSerialNumber": "17240", - "StationName": "mr3tb", - "BodyPartExamined": "SPINE", - "PatientPosition": "HFS", - "ProcedureStepDescription": "Smith_236641", - "SoftwareVersions": "5.3.0_5.3.0.3", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-MT", - "ProtocolName": "WIP_GRE-MT", - "ScanningSequence": "GR", - "SequenceVariant": "SP", - "ScanOptions": "PFF", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "FFE", "M", "FFE"], - "SeriesNumber": 601, - "AcquisitionTime": "10:26:34.190000", - "AcquisitionNumber": 6, - "PhilipsRescaleSlope": 1.7685, - "PhilipsRescaleIntercept": 0, - "PhilipsScaleSlope": 0.00059476, - "UsePhilipsFloatNotDisplayScaling": 1, - "SliceThickness": 5, - "SpacingBetweenSlices": 5, - "EchoTime": 0.002001, - "RepetitionTime": 0.057, - "FlipAngle": 9, - "CoilString": "MULTI_COIL", - "PartialFourier": 0.00390625, - "PercentPhaseFOV": 100, - "PhaseEncodingSteps": 256, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 256, - "PixelBandwidth": 261.113, - "ImageOrientationPatientDICOM": [ - 0.99999, - -1.44729e-11, - 0.00454113, - -0.000903067, - 0.980027, - 0.198862 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181022 GCC4.8.5" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 127.758, + "Manufacturer": "Philips", + "ManufacturersModelName": "Achieva_dStream", + "InstitutionName": "Vanderbilt_Health_and_williamson", + "InstitutionalDepartmentName": "Research_MRI", + "InstitutionAddress": "1161_21st_Ave_South", + "DeviceSerialNumber": "17240", + "StationName": "mr3tb", + "BodyPartExamined": "SPINE", + "PatientPosition": "HFS", + "ProcedureStepDescription": "Smith_236641", + "SoftwareVersions": "5.3.0_5.3.0.3", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-MT", + "ProtocolName": "WIP_GRE-MT", + "ScanningSequence": "GR", + "SequenceVariant": "SP", + "ScanOptions": "PFF", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "FFE", + "M", + "FFE" + ], + "SeriesNumber": 601, + "AcquisitionTime": "10:26:34.190000", + "AcquisitionNumber": 6, + "PhilipsRescaleSlope": 1.7685, + "PhilipsRescaleIntercept": 0, + "PhilipsScaleSlope": 0.00059476, + "UsePhilipsFloatNotDisplayScaling": 1, + "SliceThickness": 5, + "SpacingBetweenSlices": 5, + "EchoTime": 0.002001, + "RepetitionTime": 0.057, + "FlipAngle": 9, + "CoilString": "MULTI_COIL", + "PartialFourier": 0.00390625, + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 256, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "PixelBandwidth": 261.113, + "ImageOrientationPatientDICOM": [ + 0.99999, + -1.44729e-11, + 0.00454113, + -0.000903067, + 0.980027, + 0.198862 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181022 GCC4.8.5", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-vuiisAchieva06/anat/sub-vuiisAchieva06_flip-2_mt-off_space-other_MTS.json b/derivatives/data_preprocessed/sub-vuiisAchieva06/anat/sub-vuiisAchieva06_flip-2_mt-off_space-other_MTS.json index b396ed1467..eab53b2569 100644 --- a/derivatives/data_preprocessed/sub-vuiisAchieva06/anat/sub-vuiisAchieva06_flip-2_mt-off_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-vuiisAchieva06/anat/sub-vuiisAchieva06_flip-2_mt-off_space-other_MTS.json @@ -1,52 +1,63 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 127.758, - "Manufacturer": "Philips", - "ManufacturersModelName": "Achieva_dStream", - "InstitutionName": "Vanderbilt_Health_and_williamson", - "InstitutionalDepartmentName": "Research_MRI", - "InstitutionAddress": "1161_21st_Ave_South", - "DeviceSerialNumber": "17240", - "StationName": "mr3tb", - "BodyPartExamined": "SPINE", - "PatientPosition": "HFS", - "ProcedureStepDescription": "Smith_236641", - "SoftwareVersions": "5.3.0_5.3.0.3", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-T1", - "ProtocolName": "WIP_GRE-T1", - "ScanningSequence": "GR", - "SequenceVariant": "SP", - "ScanOptions": "PFF", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "FFE", "M", "FFE"], - "SeriesNumber": 701, - "AcquisitionTime": "10:31:29.390000", - "AcquisitionNumber": 7, - "PhilipsRescaleSlope": 2.00781, - "PhilipsRescaleIntercept": 0, - "PhilipsScaleSlope": 0.00059476, - "UsePhilipsFloatNotDisplayScaling": 1, - "SliceThickness": 5, - "SpacingBetweenSlices": 5, - "EchoTime": 0.002001, - "RepetitionTime": 0.015, - "FlipAngle": 15, - "CoilString": "MULTI_COIL", - "PartialFourier": 0.00390625, - "PercentPhaseFOV": 100, - "PhaseEncodingSteps": 256, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 256, - "PixelBandwidth": 261.113, - "ImageOrientationPatientDICOM": [ - 0.99999, - -1.44729e-11, - 0.00454113, - -0.000903067, - 0.980027, - 0.198862 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181022 GCC4.8.5" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 127.758, + "Manufacturer": "Philips", + "ManufacturersModelName": "Achieva_dStream", + "InstitutionName": "Vanderbilt_Health_and_williamson", + "InstitutionalDepartmentName": "Research_MRI", + "InstitutionAddress": "1161_21st_Ave_South", + "DeviceSerialNumber": "17240", + "StationName": "mr3tb", + "BodyPartExamined": "SPINE", + "PatientPosition": "HFS", + "ProcedureStepDescription": "Smith_236641", + "SoftwareVersions": "5.3.0_5.3.0.3", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-T1", + "ProtocolName": "WIP_GRE-T1", + "ScanningSequence": "GR", + "SequenceVariant": "SP", + "ScanOptions": "PFF", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "FFE", + "M", + "FFE" + ], + "SeriesNumber": 701, + "AcquisitionTime": "10:31:29.390000", + "AcquisitionNumber": 7, + "PhilipsRescaleSlope": 2.00781, + "PhilipsRescaleIntercept": 0, + "PhilipsScaleSlope": 0.00059476, + "UsePhilipsFloatNotDisplayScaling": 1, + "SliceThickness": 5, + "SpacingBetweenSlices": 5, + "EchoTime": 0.002001, + "RepetitionTime": 0.015, + "FlipAngle": 15, + "CoilString": "MULTI_COIL", + "PartialFourier": 0.00390625, + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 256, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "PixelBandwidth": 261.113, + "ImageOrientationPatientDICOM": [ + 0.99999, + -1.44729e-11, + 0.00454113, + -0.000903067, + 0.980027, + 0.198862 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181022 GCC4.8.5", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-vuiisAchieva06/anat/sub-vuiisAchieva06_space-other_T1w.json b/derivatives/data_preprocessed/sub-vuiisAchieva06/anat/sub-vuiisAchieva06_space-other_T1w.json index 9e4c4192b0..b9c634978d 100644 --- a/derivatives/data_preprocessed/sub-vuiisAchieva06/anat/sub-vuiisAchieva06_space-other_T1w.json +++ b/derivatives/data_preprocessed/sub-vuiisAchieva06/anat/sub-vuiisAchieva06_space-other_T1w.json @@ -1,53 +1,65 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 127.758, - "Manufacturer": "Philips", - "ManufacturersModelName": "Achieva_dStream", - "InstitutionName": "Vanderbilt_Health_and_williamson", - "InstitutionalDepartmentName": "Research_MRI", - "InstitutionAddress": "1161_21st_Ave_South", - "DeviceSerialNumber": "17240", - "StationName": "mr3tb", - "BodyPartExamined": "SPINE", - "PatientPosition": "HFS", - "ProcedureStepDescription": "Smith_236641", - "SoftwareVersions": "5.3.0_5.3.0.3", - "MRAcquisitionType": "3D", - "SeriesDescription": "T1w", - "ProtocolName": "WIP_T1w", - "ScanningSequence": "GR", - "SequenceVariant": "MP", - "ScanOptions": "OTHER", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "FFE", "M", "FFE"], - "SeriesNumber": 301, - "AcquisitionTime": "10:06:17.780000", - "AcquisitionNumber": 3, - "PhilipsRescaleSlope": 4.0061, - "PhilipsRescaleIntercept": 0, - "PhilipsScaleSlope": 0.00340686, - "UsePhilipsFloatNotDisplayScaling": 1, - "SliceThickness": 1, - "SpacingBetweenSlices": 1, - "EchoTime": 0.003549, - "RepetitionTime": 0.007653, - "FlipAngle": 9, - "CoilString": "MULTI_COIL", - "PartialFourier": 0.76875, - "PercentPhaseFOV": 81.25, - "EchoTrainLength": 246, - "PhaseEncodingSteps": 320, - "AcquisitionMatrixPE": 320, - "ReconMatrixPE": 320, - "PixelBandwidth": 191.483, - "ImageOrientationPatientDICOM": [ - 0, - 1, - 0, - 0.00454113, - 0, - -0.99999 ], - "InPlanePhaseEncodingDirectionDICOM": "ROW", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181022 GCC4.8.5" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 127.758, + "Manufacturer": "Philips", + "ManufacturersModelName": "Achieva_dStream", + "InstitutionName": "Vanderbilt_Health_and_williamson", + "InstitutionalDepartmentName": "Research_MRI", + "InstitutionAddress": "1161_21st_Ave_South", + "DeviceSerialNumber": "17240", + "StationName": "mr3tb", + "BodyPartExamined": "SPINE", + "PatientPosition": "HFS", + "ProcedureStepDescription": "Smith_236641", + "SoftwareVersions": "5.3.0_5.3.0.3", + "MRAcquisitionType": "3D", + "SeriesDescription": "T1w", + "ProtocolName": "WIP_T1w", + "ScanningSequence": "GR", + "SequenceVariant": "MP", + "ScanOptions": "OTHER", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "FFE", + "M", + "FFE" + ], + "SeriesNumber": 301, + "AcquisitionTime": "10:06:17.780000", + "AcquisitionNumber": 3, + "PhilipsRescaleSlope": 4.0061, + "PhilipsRescaleIntercept": 0, + "PhilipsScaleSlope": 0.00340686, + "UsePhilipsFloatNotDisplayScaling": 1, + "SliceThickness": 1, + "SpacingBetweenSlices": 1, + "EchoTime": 0.003549, + 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b/derivatives/data_preprocessed/sub-vuiisAchieva06/anat/sub-vuiisAchieva06_space-other_T2star.json @@ -60,5 +60,9 @@ "InPlanePhaseEncodingDirectionDICOM": "COL", "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20181022 GCC4.8.5", - "AcquisitionDuration": 242.5 + "AcquisitionDuration": 242.5, + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-vuiisAchieva06/anat/sub-vuiisAchieva06_space-other_T2w.json b/derivatives/data_preprocessed/sub-vuiisAchieva06/anat/sub-vuiisAchieva06_space-other_T2w.json index e164a140d8..18a69f4d7a 100644 --- a/derivatives/data_preprocessed/sub-vuiisAchieva06/anat/sub-vuiisAchieva06_space-other_T2w.json +++ b/derivatives/data_preprocessed/sub-vuiisAchieva06/anat/sub-vuiisAchieva06_space-other_T2w.json @@ -1,53 +1,65 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 127.757, - "Manufacturer": "Philips", - "ManufacturersModelName": "Achieva_dStream", - "InstitutionName": "Vanderbilt_Health_and_williamson", - "InstitutionalDepartmentName": "Research_MRI", - "InstitutionAddress": "1161_21st_Ave_South", - "DeviceSerialNumber": "17240", - "StationName": "mr3tb", - "BodyPartExamined": "SPINE", - "PatientPosition": "HFS", - "ProcedureStepDescription": "Smith_236641", - "SoftwareVersions": "5.3.0_5.3.0.3", - "MRAcquisitionType": "3D", - "SeriesDescription": "T2w", - "ProtocolName": "WIP_T2w", - "ScanningSequence": "SE", - "SequenceVariant": "SK", - "ScanOptions": "PFP", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "SE", "M", "SE"], - "SeriesNumber": 401, - "AcquisitionTime": "10:11:55.790000", - "AcquisitionNumber": 4, - "PhilipsRescaleSlope": 1.34725, - "PhilipsRescaleIntercept": 0, - "PhilipsScaleSlope": 0.00102863, - "UsePhilipsFloatNotDisplayScaling": 1, - "SliceThickness": 0.8, - "SpacingBetweenSlices": 0.8, - "EchoTime": 0.12, - "RepetitionTime": 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"MRAcquisitionType": "3D", + "SeriesDescription": "T2w", + "ProtocolName": "WIP_T2w", + "ScanningSequence": "SE", + "SequenceVariant": "SK", + "ScanOptions": "PFP", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "SE", + "M", + "SE" + ], + "SeriesNumber": 401, + "AcquisitionTime": "10:11:55.790000", + "AcquisitionNumber": 4, + "PhilipsRescaleSlope": 1.34725, + "PhilipsRescaleIntercept": 0, + "PhilipsScaleSlope": 0.00102863, + "UsePhilipsFloatNotDisplayScaling": 1, + "SliceThickness": 0.8, + "SpacingBetweenSlices": 0.8, + "EchoTime": 0.12, + "RepetitionTime": 3.5, + "FlipAngle": 90, + "CoilString": "MULTI_COIL", + "PartialFourier": 0.291139, + "PercentPhaseFOV": 92.5, + "EchoTrainLength": 92, + "PhaseEncodingSteps": 316, + "AcquisitionMatrixPE": 316, + "ReconMatrixPE": 320, + "PixelBandwidth": 366.784, + "ImageOrientationPatientDICOM": [ + 0, + 1, + 0, + 0.00454113, + 0, + -0.99999 + ], + "InPlanePhaseEncodingDirectionDICOM": "ROW", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181022 GCC4.8.5", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-vuiisIngenia01/anat/sub-vuiisIngenia01_flip-1_mt-on_space-other_MTS.json b/derivatives/data_preprocessed/sub-vuiisIngenia01/anat/sub-vuiisIngenia01_flip-1_mt-on_space-other_MTS.json index a9f1b6c050..22b8ceb318 100644 --- a/derivatives/data_preprocessed/sub-vuiisIngenia01/anat/sub-vuiisIngenia01_flip-1_mt-on_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-vuiisIngenia01/anat/sub-vuiisIngenia01_flip-1_mt-on_space-other_MTS.json @@ -1,51 +1,62 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 127.772, - "Manufacturer": "Philips", - "ManufacturersModelName": "Ingenia_Elition_X", - "InstitutionName": "VANDERBILT_INSTITUTE_OF_IMAGING", - "InstitutionalDepartmentName": "MRI_DEPT.", - "InstitutionAddress": "1161_21ST_AVE._SOUTH", - 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0.999926, - 0.00102336, - -0.0120843, - 0.00133215, - 0.981136, - 0.193317 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181022 GCC4.8.5" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 127.772, + "Manufacturer": "Philips", + "ManufacturersModelName": "Ingenia_Elition_X", + "InstitutionName": "VANDERBILT_INSTITUTE_OF_IMAGING", + "InstitutionalDepartmentName": "MRI_DEPT.", + "InstitutionAddress": "1161_21ST_AVE._SOUTH", + "DeviceSerialNumber": "45051", + "StationName": "PHILIPS-JJJ61LI", + "BodyPartExamined": "CSPINE", + "PatientPosition": "HFS", + "SoftwareVersions": "5.5.0_5.5.0.0", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-MT", + "ProtocolName": "WIP_GRE-MT", + "ScanningSequence": "GR", + "SequenceVariant": "SP", + "ScanOptions": "PFF", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "FFE", + "M", + "FFE" + ], + "SeriesNumber": 501, + "AcquisitionTime": "10:29:37.050000", + "AcquisitionNumber": 5, + "PhilipsRescaleSlope": 2.27009, + "PhilipsRescaleIntercept": 0, + "PhilipsScaleSlope": 0.000482742, + "UsePhilipsFloatNotDisplayScaling": 1, + "SliceThickness": 5, + "SpacingBetweenSlices": 5, + "EchoTime": 0.002001, + "RepetitionTime": 0.057, + "FlipAngle": 9, + "CoilString": "MULTI_COIL", + "PartialFourier": 0.00390625, + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 256, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "PixelBandwidth": 261.113, + "ImageOrientationPatientDICOM": [ + 0.999926, + 0.00102336, + -0.0120843, + 0.00133215, + 0.981136, + 0.193317 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181022 GCC4.8.5", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-vuiisIngenia01/anat/sub-vuiisIngenia01_flip-2_mt-off_space-other_MTS.json b/derivatives/data_preprocessed/sub-vuiisIngenia01/anat/sub-vuiisIngenia01_flip-2_mt-off_space-other_MTS.json index bcce0b6ec1..7a4f58da06 100644 --- a/derivatives/data_preprocessed/sub-vuiisIngenia01/anat/sub-vuiisIngenia01_flip-2_mt-off_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-vuiisIngenia01/anat/sub-vuiisIngenia01_flip-2_mt-off_space-other_MTS.json @@ -1,51 +1,62 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 127.772, - "Manufacturer": "Philips", - "ManufacturersModelName": "Ingenia_Elition_X", - "InstitutionName": "VANDERBILT_INSTITUTE_OF_IMAGING", - "InstitutionalDepartmentName": "MRI_DEPT.", - "InstitutionAddress": "1161_21ST_AVE._SOUTH", - "DeviceSerialNumber": "45051", - "StationName": "PHILIPS-JJJ61LI", - "BodyPartExamined": "CSPINE", - "PatientPosition": "HFS", - "SoftwareVersions": "5.5.0_5.5.0.0", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-T1", - "ProtocolName": "WIP_GRE-T1", - "ScanningSequence": "GR", - 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127.772, + "Manufacturer": "Philips", + "ManufacturersModelName": "Ingenia_Elition_X", + "InstitutionName": "VANDERBILT_INSTITUTE_OF_IMAGING", + "InstitutionalDepartmentName": "MRI_DEPT.", + "InstitutionAddress": "1161_21ST_AVE._SOUTH", + "DeviceSerialNumber": "45051", + "StationName": "PHILIPS-JJJ61LI", + "BodyPartExamined": "CSPINE", + "PatientPosition": "HFS", + "SoftwareVersions": "5.5.0_5.5.0.0", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-T1", + "ProtocolName": "WIP_GRE-T1", + "ScanningSequence": "GR", + "SequenceVariant": "SP", + "ScanOptions": "PFF", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "FFE", + "M", + "FFE" + ], + "SeriesNumber": 601, + "AcquisitionTime": "10:34:29.540000", + "AcquisitionNumber": 6, + "PhilipsRescaleSlope": 2.34286, + "PhilipsRescaleIntercept": 0, + "PhilipsScaleSlope": 0.000482742, + "UsePhilipsFloatNotDisplayScaling": 1, + "SliceThickness": 5, + "SpacingBetweenSlices": 5, + "EchoTime": 0.002001, + "RepetitionTime": 0.015, + "FlipAngle": 15, + "CoilString": "MULTI_COIL", + "PartialFourier": 0.00390625, + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 256, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "PixelBandwidth": 261.113, + "ImageOrientationPatientDICOM": [ + 0.999926, + 0.00102336, + -0.0120843, + 0.00133215, + 0.981136, + 0.193317 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181022 GCC4.8.5", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-vuiisIngenia01/anat/sub-vuiisIngenia01_space-other_T1w.json b/derivatives/data_preprocessed/sub-vuiisIngenia01/anat/sub-vuiisIngenia01_space-other_T1w.json index 72209f649c..f0206646c2 100644 --- a/derivatives/data_preprocessed/sub-vuiisIngenia01/anat/sub-vuiisIngenia01_space-other_T1w.json +++ b/derivatives/data_preprocessed/sub-vuiisIngenia01/anat/sub-vuiisIngenia01_space-other_T1w.json @@ -1,52 +1,64 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 127.771, - "Manufacturer": "Philips", - "ManufacturersModelName": "Ingenia_Elition_X", - "InstitutionName": "VANDERBILT_INSTITUTE_OF_IMAGING", - "InstitutionalDepartmentName": "MRI_DEPT.", - "InstitutionAddress": "1161_21ST_AVE._SOUTH", - "DeviceSerialNumber": "45051", - "StationName": "PHILIPS-JJJ61LI", - "BodyPartExamined": "CSPINE", - "PatientPosition": "HFS", - "SoftwareVersions": "5.5.0_5.5.0.0", - "MRAcquisitionType": "3D", - "SeriesDescription": "T1w", - "ProtocolName": "WIP_T1w", - "ScanningSequence": "GR", - "SequenceVariant": "MP", - "ScanOptions": "OTHER", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "FFE", "M", "FFE"], - "SeriesNumber": 201, - "AcquisitionTime": "10:08:46.590000", - "AcquisitionNumber": 2, - "PhilipsRescaleSlope": 3.42344, - "PhilipsRescaleIntercept": 0, - "PhilipsScaleSlope": 0.00378083, - "UsePhilipsFloatNotDisplayScaling": 1, - "SliceThickness": 1, - "SpacingBetweenSlices": 1, - "EchoTime": 0.003704, - "RepetitionTime": 0.0080826, - "FlipAngle": 9, - "CoilString": "MULTI_COIL", - "PartialFourier": 0.76875, - "PercentPhaseFOV": 81.25, - "EchoTrainLength": 246, - "PhaseEncodingSteps": 320, - "AcquisitionMatrixPE": 320, - "ReconMatrixPE": 320, - "PixelBandwidth": 191.483, - "ImageOrientationPatientDICOM": [ - -0.000937793, - 0.999974, - 0.00708436, - -0.0120913, - 0.00707251, - -0.999902 ], - "InPlanePhaseEncodingDirectionDICOM": "ROW", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181022 GCC4.8.5" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 127.771, + "Manufacturer": "Philips", + "ManufacturersModelName": "Ingenia_Elition_X", + "InstitutionName": "VANDERBILT_INSTITUTE_OF_IMAGING", + "InstitutionalDepartmentName": "MRI_DEPT.", + "InstitutionAddress": "1161_21ST_AVE._SOUTH", + "DeviceSerialNumber": "45051", + "StationName": "PHILIPS-JJJ61LI", + "BodyPartExamined": "CSPINE", + "PatientPosition": "HFS", + "SoftwareVersions": "5.5.0_5.5.0.0", + "MRAcquisitionType": "3D", + "SeriesDescription": "T1w", + "ProtocolName": "WIP_T1w", + "ScanningSequence": "GR", + "SequenceVariant": "MP", + "ScanOptions": "OTHER", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "FFE", + "M", + "FFE" + ], + "SeriesNumber": 201, + "AcquisitionTime": "10:08:46.590000", + "AcquisitionNumber": 2, + "PhilipsRescaleSlope": 3.42344, + "PhilipsRescaleIntercept": 0, + "PhilipsScaleSlope": 0.00378083, + "UsePhilipsFloatNotDisplayScaling": 1, + "SliceThickness": 1, + "SpacingBetweenSlices": 1, + "EchoTime": 0.003704, + "RepetitionTime": 0.0080826, + "FlipAngle": 9, + "CoilString": "MULTI_COIL", + "PartialFourier": 0.76875, + "PercentPhaseFOV": 81.25, + "EchoTrainLength": 246, + "PhaseEncodingSteps": 320, + "AcquisitionMatrixPE": 320, + "ReconMatrixPE": 320, + "PixelBandwidth": 191.483, + "ImageOrientationPatientDICOM": [ + -0.000937793, + 0.999974, + 0.00708436, + -0.0120913, + 0.00707251, + -0.999902 + ], + "InPlanePhaseEncodingDirectionDICOM": "ROW", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181022 GCC4.8.5", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-vuiisIngenia01/anat/sub-vuiisIngenia01_space-other_T2star.json b/derivatives/data_preprocessed/sub-vuiisIngenia01/anat/sub-vuiisIngenia01_space-other_T2star.json index e4f2d39be3..f8d8b8caea 100644 --- a/derivatives/data_preprocessed/sub-vuiisIngenia01/anat/sub-vuiisIngenia01_space-other_T2star.json +++ b/derivatives/data_preprocessed/sub-vuiisIngenia01/anat/sub-vuiisIngenia01_space-other_T2star.json @@ -59,5 +59,9 @@ "InPlanePhaseEncodingDirectionDICOM": "COL", "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20181022 GCC4.8.5", - "AcquisitionDuration": 242.5 + "AcquisitionDuration": 242.5, + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-vuiisIngenia01/anat/sub-vuiisIngenia01_space-other_T2w.json b/derivatives/data_preprocessed/sub-vuiisIngenia01/anat/sub-vuiisIngenia01_space-other_T2w.json index 236b607a34..bf3829aaf5 100644 --- a/derivatives/data_preprocessed/sub-vuiisIngenia01/anat/sub-vuiisIngenia01_space-other_T2w.json +++ b/derivatives/data_preprocessed/sub-vuiisIngenia01/anat/sub-vuiisIngenia01_space-other_T2w.json @@ -1,52 +1,64 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 127.771, - "Manufacturer": "Philips", - "ManufacturersModelName": "Ingenia_Elition_X", - "InstitutionName": "VANDERBILT_INSTITUTE_OF_IMAGING", - "InstitutionalDepartmentName": "MRI_DEPT.", - "InstitutionAddress": "1161_21ST_AVE._SOUTH", - "DeviceSerialNumber": "45051", - "StationName": "PHILIPS-JJJ61LI", - "BodyPartExamined": "CSPINE", - "PatientPosition": "HFS", - "SoftwareVersions": "5.5.0_5.5.0.0", - "MRAcquisitionType": "3D", - "SeriesDescription": "T2w", - "ProtocolName": "WIP_T2w", - "ScanningSequence": "SE", - "SequenceVariant": "SK", - "ScanOptions": "PFP", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "SE", "M", "SE"], - "SeriesNumber": 301, - "AcquisitionTime": "10:14:29.790000", - "AcquisitionNumber": 3, - "PhilipsRescaleSlope": 1.34725, - "PhilipsRescaleIntercept": 0, - "PhilipsScaleSlope": 0.00121957, - "UsePhilipsFloatNotDisplayScaling": 1, - "SliceThickness": 0.8, - "SpacingBetweenSlices": 0.8, - "EchoTime": 0.12, - "RepetitionTime": 3.5, - "FlipAngle": 90, - "CoilString": "MULTI_COIL", - "PartialFourier": 0.288026, - "PercentPhaseFOV": 92.5, - "EchoTrainLength": 89, - "PhaseEncodingSteps": 309, - "AcquisitionMatrixPE": 309, - "ReconMatrixPE": 320, - "PixelBandwidth": 394.571, - "ImageOrientationPatientDICOM": [ - -0.000937793, - 0.999974, - 0.00708436, - -0.0120913, - 0.00707251, - -0.999902 ], - "InPlanePhaseEncodingDirectionDICOM": "ROW", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181022 GCC4.8.5" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 127.771, + "Manufacturer": "Philips", + "ManufacturersModelName": "Ingenia_Elition_X", + "InstitutionName": "VANDERBILT_INSTITUTE_OF_IMAGING", + "InstitutionalDepartmentName": "MRI_DEPT.", + "InstitutionAddress": "1161_21ST_AVE._SOUTH", + "DeviceSerialNumber": "45051", + "StationName": "PHILIPS-JJJ61LI", + "BodyPartExamined": "CSPINE", + "PatientPosition": "HFS", + "SoftwareVersions": "5.5.0_5.5.0.0", + "MRAcquisitionType": "3D", + "SeriesDescription": "T2w", + "ProtocolName": "WIP_T2w", + "ScanningSequence": "SE", + "SequenceVariant": "SK", + "ScanOptions": "PFP", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "SE", + "M", + "SE" + ], + "SeriesNumber": 301, + "AcquisitionTime": "10:14:29.790000", + "AcquisitionNumber": 3, + "PhilipsRescaleSlope": 1.34725, + 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b/derivatives/data_preprocessed/sub-vuiisIngenia02/anat/sub-vuiisIngenia02_flip-1_mt-on_space-other_MTS.json index 5d77d6c37a..5277297fff 100644 --- a/derivatives/data_preprocessed/sub-vuiisIngenia02/anat/sub-vuiisIngenia02_flip-1_mt-on_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-vuiisIngenia02/anat/sub-vuiisIngenia02_flip-1_mt-on_space-other_MTS.json @@ -1,52 +1,63 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 127.772, - "Manufacturer": "Philips", - "ManufacturersModelName": "Ingenia_Elition_X", - "InstitutionName": "VANDERBILT_INSTITUTE_OF_IMAGING", - "InstitutionalDepartmentName": "MRI_DEPT.", - "InstitutionAddress": "1161_21ST_AVE._SOUTH", - "DeviceSerialNumber": "45051", - "StationName": "PHILIPS-JJJ61LI", - "BodyPartExamined": "CSPINE", - "PatientPosition": "HFS", - "ProcedureStepDescription": "Smith_136536", - "SoftwareVersions": "5.5.0_5.5.0.0", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-MT", - "ProtocolName": 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"MagneticFieldStrength": 3, + "ImagingFrequency": 127.772, + "Manufacturer": "Philips", + "ManufacturersModelName": "Ingenia_Elition_X", + "InstitutionName": "VANDERBILT_INSTITUTE_OF_IMAGING", + "InstitutionalDepartmentName": "MRI_DEPT.", + "InstitutionAddress": "1161_21ST_AVE._SOUTH", + "DeviceSerialNumber": "45051", + "StationName": "PHILIPS-JJJ61LI", + "BodyPartExamined": "CSPINE", + "PatientPosition": "HFS", + "ProcedureStepDescription": "Smith_136536", + "SoftwareVersions": "5.5.0_5.5.0.0", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-MT", + "ProtocolName": "WIP_GRE-MT", + "ScanningSequence": "GR", + "SequenceVariant": "SP", + "ScanOptions": "PFF", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "FFE", + "M", + "FFE" + ], + "SeriesNumber": 501, + "AcquisitionTime": "10:32:17.440000", + "AcquisitionNumber": 5, + "PhilipsRescaleSlope": 2.11844, + "PhilipsRescaleIntercept": 0, + "PhilipsScaleSlope": 0.000599252, + "UsePhilipsFloatNotDisplayScaling": 1, + "SliceThickness": 5, + "SpacingBetweenSlices": 5, + "EchoTime": 0.002001, + "RepetitionTime": 0.057, + "FlipAngle": 9, + "CoilString": "MULTI_COIL", + "PartialFourier": 0.00390625, + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 256, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "PixelBandwidth": 261.113, + "ImageOrientationPatientDICOM": [ + 0.999908, + 0.00102336, + 0.0135166, + -0.005281, + 0.94777, + 0.318912 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181022 GCC4.8.5", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-vuiisIngenia02/anat/sub-vuiisIngenia02_flip-2_mt-off_space-other_MTS.json b/derivatives/data_preprocessed/sub-vuiisIngenia02/anat/sub-vuiisIngenia02_flip-2_mt-off_space-other_MTS.json index 0435b2927c..9550d3fc26 100644 --- a/derivatives/data_preprocessed/sub-vuiisIngenia02/anat/sub-vuiisIngenia02_flip-2_mt-off_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-vuiisIngenia02/anat/sub-vuiisIngenia02_flip-2_mt-off_space-other_MTS.json @@ -1,52 +1,63 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 127.772, - "Manufacturer": "Philips", - "ManufacturersModelName": "Ingenia_Elition_X", - "InstitutionName": "VANDERBILT_INSTITUTE_OF_IMAGING", - "InstitutionalDepartmentName": "MRI_DEPT.", - "InstitutionAddress": "1161_21ST_AVE._SOUTH", - "DeviceSerialNumber": "45051", - "StationName": "PHILIPS-JJJ61LI", - "BodyPartExamined": "CSPINE", - "PatientPosition": "HFS", - "ProcedureStepDescription": "Smith_136536", - "SoftwareVersions": "5.5.0_5.5.0.0", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-T1", - "ProtocolName": "WIP_GRE-T1", - "ScanningSequence": "GR", - "SequenceVariant": "SP", - "ScanOptions": "PFF", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "FFE", "M", "FFE"], - "SeriesNumber": 601, - "AcquisitionTime": "10:37:9.920000", - "AcquisitionNumber": 6, - "PhilipsRescaleSlope": 2.26886, - "PhilipsRescaleIntercept": 0, - "PhilipsScaleSlope": 0.000599252, - "UsePhilipsFloatNotDisplayScaling": 1, - "SliceThickness": 5, - "SpacingBetweenSlices": 5, - "EchoTime": 0.002001, - "RepetitionTime": 0.015, - "FlipAngle": 15, - "CoilString": "MULTI_COIL", - "PartialFourier": 0.00390625, - "PercentPhaseFOV": 100, - "PhaseEncodingSteps": 256, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 256, - "PixelBandwidth": 261.113, - "ImageOrientationPatientDICOM": [ - 0.999908, - 0.00102336, - 0.0135166, - -0.005281, - 0.94777, - 0.318912 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181022 GCC4.8.5" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 127.772, + "Manufacturer": "Philips", + "ManufacturersModelName": "Ingenia_Elition_X", + "InstitutionName": "VANDERBILT_INSTITUTE_OF_IMAGING", + "InstitutionalDepartmentName": "MRI_DEPT.", + "InstitutionAddress": "1161_21ST_AVE._SOUTH", + "DeviceSerialNumber": "45051", + "StationName": "PHILIPS-JJJ61LI", + "BodyPartExamined": "CSPINE", + "PatientPosition": "HFS", + "ProcedureStepDescription": "Smith_136536", + "SoftwareVersions": "5.5.0_5.5.0.0", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-T1", + "ProtocolName": "WIP_GRE-T1", + "ScanningSequence": "GR", + "SequenceVariant": "SP", + "ScanOptions": "PFF", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "FFE", + "M", + "FFE" + ], + "SeriesNumber": 601, + "AcquisitionTime": "10:37:9.920000", + "AcquisitionNumber": 6, + "PhilipsRescaleSlope": 2.26886, + "PhilipsRescaleIntercept": 0, + "PhilipsScaleSlope": 0.000599252, + "UsePhilipsFloatNotDisplayScaling": 1, + "SliceThickness": 5, + "SpacingBetweenSlices": 5, + "EchoTime": 0.002001, + "RepetitionTime": 0.015, + "FlipAngle": 15, + "CoilString": "MULTI_COIL", + "PartialFourier": 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"ImagingFrequency": 127.771, - "Manufacturer": "Philips", - "ManufacturersModelName": "Ingenia_Elition_X", - "InstitutionName": "VANDERBILT_INSTITUTE_OF_IMAGING", - "InstitutionalDepartmentName": "MRI_DEPT.", - "InstitutionAddress": "1161_21ST_AVE._SOUTH", - "DeviceSerialNumber": "45051", - "StationName": "PHILIPS-JJJ61LI", - "BodyPartExamined": "CSPINE", - "PatientPosition": "HFS", - "ProcedureStepDescription": "Smith_136536", - "SoftwareVersions": "5.5.0_5.5.0.0", - "MRAcquisitionType": "3D", - "SeriesDescription": "T1w", - "ProtocolName": "WIP_T1w", - "ScanningSequence": "GR", - "SequenceVariant": "MP", - "ScanOptions": "OTHER", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "FFE", "M", "FFE"], - "SeriesNumber": 201, - "AcquisitionTime": "10:12:7.810000", - "AcquisitionNumber": 2, - "PhilipsRescaleSlope": 3.4, - "PhilipsRescaleIntercept": 0, - "PhilipsScaleSlope": 0.00366627, - "UsePhilipsFloatNotDisplayScaling": 1, - "SliceThickness": 1, - "SpacingBetweenSlices": 1, - "EchoTime": 0.003704, - "RepetitionTime": 0.0080824, - "FlipAngle": 9, - "CoilString": "MULTI_COIL", - "PartialFourier": 0.76875, - "PercentPhaseFOV": 81.25, - "EchoTrainLength": 246, - "PhaseEncodingSteps": 320, - "AcquisitionMatrixPE": 320, - "ReconMatrixPE": 320, - "PixelBandwidth": 191.483, - "ImageOrientationPatientDICOM": [ - -0.00111884, - 0.999974, - 0.00705803, - 0.013509, - 0.00707251, - -0.999884 ], - "InPlanePhaseEncodingDirectionDICOM": "ROW", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181022 GCC4.8.5" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 127.771, + "Manufacturer": "Philips", + "ManufacturersModelName": "Ingenia_Elition_X", + "InstitutionName": "VANDERBILT_INSTITUTE_OF_IMAGING", + "InstitutionalDepartmentName": "MRI_DEPT.", + "InstitutionAddress": "1161_21ST_AVE._SOUTH", + "DeviceSerialNumber": "45051", + "StationName": "PHILIPS-JJJ61LI", + "BodyPartExamined": "CSPINE", + "PatientPosition": "HFS", + "ProcedureStepDescription": "Smith_136536", + "SoftwareVersions": "5.5.0_5.5.0.0", + "MRAcquisitionType": "3D", + "SeriesDescription": "T1w", + "ProtocolName": "WIP_T1w", + "ScanningSequence": "GR", + "SequenceVariant": "MP", + "ScanOptions": "OTHER", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "FFE", + "M", + "FFE" + ], + "SeriesNumber": 201, + "AcquisitionTime": "10:12:7.810000", + "AcquisitionNumber": 2, + "PhilipsRescaleSlope": 3.4, + "PhilipsRescaleIntercept": 0, + "PhilipsScaleSlope": 0.00366627, + "UsePhilipsFloatNotDisplayScaling": 1, + "SliceThickness": 1, + "SpacingBetweenSlices": 1, + "EchoTime": 0.003704, + "RepetitionTime": 0.0080824, + "FlipAngle": 9, + "CoilString": "MULTI_COIL", + "PartialFourier": 0.76875, + "PercentPhaseFOV": 81.25, + "EchoTrainLength": 246, + "PhaseEncodingSteps": 320, + "AcquisitionMatrixPE": 320, + "ReconMatrixPE": 320, + "PixelBandwidth": 191.483, + "ImageOrientationPatientDICOM": [ + -0.00111884, + 0.999974, + 0.00705803, + 0.013509, + 0.00707251, + -0.999884 + ], + "InPlanePhaseEncodingDirectionDICOM": "ROW", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181022 GCC4.8.5", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-vuiisIngenia02/anat/sub-vuiisIngenia02_space-other_T2star.json b/derivatives/data_preprocessed/sub-vuiisIngenia02/anat/sub-vuiisIngenia02_space-other_T2star.json index ae33f13451..30e5f52200 100644 --- a/derivatives/data_preprocessed/sub-vuiisIngenia02/anat/sub-vuiisIngenia02_space-other_T2star.json +++ b/derivatives/data_preprocessed/sub-vuiisIngenia02/anat/sub-vuiisIngenia02_space-other_T2star.json @@ -60,5 +60,9 @@ "InPlanePhaseEncodingDirectionDICOM": "COL", "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20181022 GCC4.8.5", - "AcquisitionDuration": 242.5 + "AcquisitionDuration": 242.5, + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-vuiisIngenia02/anat/sub-vuiisIngenia02_space-other_T2w.json b/derivatives/data_preprocessed/sub-vuiisIngenia02/anat/sub-vuiisIngenia02_space-other_T2w.json index 79b7d236d6..512660ac7d 100644 --- a/derivatives/data_preprocessed/sub-vuiisIngenia02/anat/sub-vuiisIngenia02_space-other_T2w.json +++ b/derivatives/data_preprocessed/sub-vuiisIngenia02/anat/sub-vuiisIngenia02_space-other_T2w.json @@ -1,53 +1,65 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 127.771, - "Manufacturer": "Philips", - "ManufacturersModelName": "Ingenia_Elition_X", - "InstitutionName": "VANDERBILT_INSTITUTE_OF_IMAGING", - "InstitutionalDepartmentName": "MRI_DEPT.", - "InstitutionAddress": "1161_21ST_AVE._SOUTH", - "DeviceSerialNumber": "45051", - "StationName": "PHILIPS-JJJ61LI", - "BodyPartExamined": "CSPINE", - "PatientPosition": "HFS", - "ProcedureStepDescription": "Smith_136536", - "SoftwareVersions": "5.5.0_5.5.0.0", - "MRAcquisitionType": "3D", - "SeriesDescription": "T2w", - "ProtocolName": "WIP_T2w", - "ScanningSequence": "SE", - "SequenceVariant": "SK", - "ScanOptions": "PFP", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "SE", "M", "SE"], - "SeriesNumber": 301, - "AcquisitionTime": "10:17:37.890000", - "AcquisitionNumber": 3, - "PhilipsRescaleSlope": 1.47106, - "PhilipsRescaleIntercept": 0, - "PhilipsScaleSlope": 0.00100557, - "UsePhilipsFloatNotDisplayScaling": 1, - "SliceThickness": 0.8, - "SpacingBetweenSlices": 0.8, - "EchoTime": 0.12, - "RepetitionTime": 3.5, - "FlipAngle": 90, - "CoilString": "MULTI_COIL", - "PartialFourier": 0.288026, - "PercentPhaseFOV": 92.5, - "EchoTrainLength": 89, - "PhaseEncodingSteps": 309, - "AcquisitionMatrixPE": 309, - "ReconMatrixPE": 320, - "PixelBandwidth": 394.571, - "ImageOrientationPatientDICOM": [ - -0.00111884, - 0.999974, - 0.00705803, - 0.013509, - 0.00707251, - -0.999884 ], - "InPlanePhaseEncodingDirectionDICOM": "ROW", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181022 GCC4.8.5" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 127.771, + "Manufacturer": "Philips", + "ManufacturersModelName": "Ingenia_Elition_X", + "InstitutionName": "VANDERBILT_INSTITUTE_OF_IMAGING", + "InstitutionalDepartmentName": "MRI_DEPT.", + "InstitutionAddress": "1161_21ST_AVE._SOUTH", + "DeviceSerialNumber": "45051", + "StationName": "PHILIPS-JJJ61LI", + "BodyPartExamined": "CSPINE", + "PatientPosition": "HFS", + "ProcedureStepDescription": "Smith_136536", + "SoftwareVersions": "5.5.0_5.5.0.0", + "MRAcquisitionType": "3D", + "SeriesDescription": "T2w", + "ProtocolName": "WIP_T2w", + "ScanningSequence": "SE", + "SequenceVariant": "SK", + "ScanOptions": "PFP", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "SE", + "M", + "SE" + ], + "SeriesNumber": 301, + "AcquisitionTime": "10:17:37.890000", + "AcquisitionNumber": 3, + "PhilipsRescaleSlope": 1.47106, + "PhilipsRescaleIntercept": 0, + "PhilipsScaleSlope": 0.00100557, + "UsePhilipsFloatNotDisplayScaling": 1, + "SliceThickness": 0.8, + "SpacingBetweenSlices": 0.8, + "EchoTime": 0.12, + "RepetitionTime": 3.5, + "FlipAngle": 90, + "CoilString": "MULTI_COIL", + "PartialFourier": 0.288026, + "PercentPhaseFOV": 92.5, + "EchoTrainLength": 89, + "PhaseEncodingSteps": 309, + "AcquisitionMatrixPE": 309, + "ReconMatrixPE": 320, + "PixelBandwidth": 394.571, + "ImageOrientationPatientDICOM": [ + -0.00111884, + 0.999974, + 0.00705803, + 0.013509, + 0.00707251, + -0.999884 + ], + "InPlanePhaseEncodingDirectionDICOM": "ROW", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181022 GCC4.8.5", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-vuiisIngenia03/anat/sub-vuiisIngenia03_flip-1_mt-on_space-other_MTS.json b/derivatives/data_preprocessed/sub-vuiisIngenia03/anat/sub-vuiisIngenia03_flip-1_mt-on_space-other_MTS.json index c4b80852d9..c6c1a660c6 100644 --- a/derivatives/data_preprocessed/sub-vuiisIngenia03/anat/sub-vuiisIngenia03_flip-1_mt-on_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-vuiisIngenia03/anat/sub-vuiisIngenia03_flip-1_mt-on_space-other_MTS.json @@ -1,52 +1,63 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 127.772, - "Manufacturer": "Philips", - "ManufacturersModelName": "Ingenia_Elition_X", - "InstitutionName": "VANDERBILT_INSTITUTE_OF_IMAGING", - "InstitutionalDepartmentName": "MRI_DEPT.", - "InstitutionAddress": "1161_21ST_AVE._SOUTH", - "DeviceSerialNumber": "45051", - "StationName": "PHILIPS-JJJ61LI", - "BodyPartExamined": "CSPINE", - "PatientPosition": "HFS", - "ProcedureStepDescription": "Smith_136538", - "SoftwareVersions": "5.5.0_5.5.0.0", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-MT", - "ProtocolName": "WIP_GRE-MT", - "ScanningSequence": "GR", - "SequenceVariant": "SP", - "ScanOptions": "PFF", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "FFE", "M", "FFE"], - "SeriesNumber": 501, - "AcquisitionTime": "11:27:47.890000", - "AcquisitionNumber": 5, - "PhilipsRescaleSlope": 2.36752, - "PhilipsRescaleIntercept": 0, - "PhilipsScaleSlope": 0.000490715, - "UsePhilipsFloatNotDisplayScaling": 1, - "SliceThickness": 5, - "SpacingBetweenSlices": 5, - "EchoTime": 0.002001, - "RepetitionTime": 0.057, - "FlipAngle": 9, - "CoilString": "MULTI_COIL", - "PartialFourier": 0.00390625, - "PercentPhaseFOV": 100, - "PhaseEncodingSteps": 256, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 256, - "PixelBandwidth": 261.113, - "ImageOrientationPatientDICOM": [ - 0.999995, - 0.00102336, - 0.00306996, - -0.00112342, - 0.999462, - 0.0327715 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181022 GCC4.8.5" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 127.772, + "Manufacturer": "Philips", + "ManufacturersModelName": "Ingenia_Elition_X", + "InstitutionName": "VANDERBILT_INSTITUTE_OF_IMAGING", + "InstitutionalDepartmentName": "MRI_DEPT.", + "InstitutionAddress": "1161_21ST_AVE._SOUTH", + "DeviceSerialNumber": "45051", + "StationName": "PHILIPS-JJJ61LI", + "BodyPartExamined": "CSPINE", + "PatientPosition": "HFS", + "ProcedureStepDescription": "Smith_136538", + "SoftwareVersions": "5.5.0_5.5.0.0", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-MT", + "ProtocolName": "WIP_GRE-MT", + "ScanningSequence": "GR", + "SequenceVariant": "SP", + "ScanOptions": "PFF", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "FFE", + "M", + "FFE" + ], + "SeriesNumber": 501, + "AcquisitionTime": "11:27:47.890000", + "AcquisitionNumber": 5, + "PhilipsRescaleSlope": 2.36752, + "PhilipsRescaleIntercept": 0, + "PhilipsScaleSlope": 0.000490715, + "UsePhilipsFloatNotDisplayScaling": 1, + "SliceThickness": 5, + "SpacingBetweenSlices": 5, + "EchoTime": 0.002001, + "RepetitionTime": 0.057, + "FlipAngle": 9, + "CoilString": "MULTI_COIL", + "PartialFourier": 0.00390625, + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 256, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "PixelBandwidth": 261.113, + "ImageOrientationPatientDICOM": [ + 0.999995, + 0.00102336, + 0.00306996, + -0.00112342, + 0.999462, + 0.0327715 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181022 GCC4.8.5", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-vuiisIngenia03/anat/sub-vuiisIngenia03_flip-2_mt-off_space-other_MTS.json b/derivatives/data_preprocessed/sub-vuiisIngenia03/anat/sub-vuiisIngenia03_flip-2_mt-off_space-other_MTS.json index 05066f12c1..093a9b380e 100644 --- a/derivatives/data_preprocessed/sub-vuiisIngenia03/anat/sub-vuiisIngenia03_flip-2_mt-off_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-vuiisIngenia03/anat/sub-vuiisIngenia03_flip-2_mt-off_space-other_MTS.json @@ -1,52 +1,63 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 127.772, - "Manufacturer": "Philips", - "ManufacturersModelName": "Ingenia_Elition_X", - "InstitutionName": "VANDERBILT_INSTITUTE_OF_IMAGING", - "InstitutionalDepartmentName": "MRI_DEPT.", - "InstitutionAddress": "1161_21ST_AVE._SOUTH", - "DeviceSerialNumber": "45051", - "StationName": "PHILIPS-JJJ61LI", - "BodyPartExamined": "CSPINE", - "PatientPosition": "HFS", - "ProcedureStepDescription": "Smith_136538", - "SoftwareVersions": "5.5.0_5.5.0.0", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-T1", - "ProtocolName": "WIP_GRE-T1", - "ScanningSequence": "GR", - "SequenceVariant": "SP", - "ScanOptions": "PFF", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "FFE", "M", "FFE"], - "SeriesNumber": 601, - "AcquisitionTime": "11:32:40.330000", - "AcquisitionNumber": 6, - "PhilipsRescaleSlope": 2.50379, - "PhilipsRescaleIntercept": 0, - "PhilipsScaleSlope": 0.000490715, - "UsePhilipsFloatNotDisplayScaling": 1, - "SliceThickness": 5, - "SpacingBetweenSlices": 5, - "EchoTime": 0.002001, - "RepetitionTime": 0.015, - "FlipAngle": 15, - "CoilString": "MULTI_COIL", - "PartialFourier": 0.00390625, - "PercentPhaseFOV": 100, - "PhaseEncodingSteps": 256, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 256, - "PixelBandwidth": 261.113, - "ImageOrientationPatientDICOM": [ - 0.999995, - 0.00102336, - 0.00306996, - -0.00112342, - 0.999462, - 0.0327715 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181022 GCC4.8.5" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 127.772, + "Manufacturer": "Philips", + "ManufacturersModelName": "Ingenia_Elition_X", + "InstitutionName": "VANDERBILT_INSTITUTE_OF_IMAGING", + "InstitutionalDepartmentName": "MRI_DEPT.", + "InstitutionAddress": "1161_21ST_AVE._SOUTH", + "DeviceSerialNumber": "45051", + "StationName": "PHILIPS-JJJ61LI", + "BodyPartExamined": "CSPINE", + "PatientPosition": "HFS", + "ProcedureStepDescription": "Smith_136538", + "SoftwareVersions": "5.5.0_5.5.0.0", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-T1", + "ProtocolName": "WIP_GRE-T1", + "ScanningSequence": "GR", + "SequenceVariant": "SP", + "ScanOptions": "PFF", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "FFE", + "M", + "FFE" + ], + "SeriesNumber": 601, + "AcquisitionTime": "11:32:40.330000", + "AcquisitionNumber": 6, + "PhilipsRescaleSlope": 2.50379, + "PhilipsRescaleIntercept": 0, + "PhilipsScaleSlope": 0.000490715, + "UsePhilipsFloatNotDisplayScaling": 1, + "SliceThickness": 5, + "SpacingBetweenSlices": 5, + "EchoTime": 0.002001, + "RepetitionTime": 0.015, + "FlipAngle": 15, + "CoilString": "MULTI_COIL", + "PartialFourier": 0.00390625, + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 256, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "PixelBandwidth": 261.113, + "ImageOrientationPatientDICOM": [ + 0.999995, + 0.00102336, + 0.00306996, + -0.00112342, + 0.999462, + 0.0327715 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181022 GCC4.8.5", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-vuiisIngenia03/anat/sub-vuiisIngenia03_space-other_T1w.json b/derivatives/data_preprocessed/sub-vuiisIngenia03/anat/sub-vuiisIngenia03_space-other_T1w.json index f9d2f6a4bb..d3fb57bb18 100644 --- a/derivatives/data_preprocessed/sub-vuiisIngenia03/anat/sub-vuiisIngenia03_space-other_T1w.json +++ b/derivatives/data_preprocessed/sub-vuiisIngenia03/anat/sub-vuiisIngenia03_space-other_T1w.json @@ -1,53 +1,65 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 127.771, - "Manufacturer": "Philips", - "ManufacturersModelName": "Ingenia_Elition_X", - "InstitutionName": "VANDERBILT_INSTITUTE_OF_IMAGING", - "InstitutionalDepartmentName": "MRI_DEPT.", - "InstitutionAddress": "1161_21ST_AVE._SOUTH", - "DeviceSerialNumber": "45051", - "StationName": "PHILIPS-JJJ61LI", - "BodyPartExamined": "CSPINE", - "PatientPosition": "HFS", - "ProcedureStepDescription": "Smith_136538", - "SoftwareVersions": "5.5.0_5.5.0.0", - "MRAcquisitionType": "3D", - "SeriesDescription": "T1w", - "ProtocolName": "WIP_T1w", - "ScanningSequence": "GR", - "SequenceVariant": "MP", - "ScanOptions": "OTHER", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "FFE", "M", "FFE"], - "SeriesNumber": 201, - "AcquisitionTime": "11:09:2.630000", - "AcquisitionNumber": 2, - "PhilipsRescaleSlope": 3.31062, - "PhilipsRescaleIntercept": 0, - "PhilipsScaleSlope": 0.00386541, - "UsePhilipsFloatNotDisplayScaling": 1, - "SliceThickness": 1, - "SpacingBetweenSlices": 1, - "EchoTime": 0.003703, - "RepetitionTime": 0.0080795, - "FlipAngle": 9, - "CoilString": "MULTI_COIL", - "PartialFourier": 0.76875, - "PercentPhaseFOV": 81.25, - "EchoTrainLength": 246, - "PhaseEncodingSteps": 320, - "AcquisitionMatrixPE": 320, - "ReconMatrixPE": 320, - "PixelBandwidth": 191.483, - "ImageOrientationPatientDICOM": [ - -0.00104504, - 0.999974, - 0.00706934, - 0.00306264, - 0.00707251, - -0.99997 ], - "InPlanePhaseEncodingDirectionDICOM": "ROW", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181022 GCC4.8.5" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 127.771, + "Manufacturer": "Philips", + "ManufacturersModelName": "Ingenia_Elition_X", + "InstitutionName": "VANDERBILT_INSTITUTE_OF_IMAGING", + "InstitutionalDepartmentName": "MRI_DEPT.", + "InstitutionAddress": "1161_21ST_AVE._SOUTH", + "DeviceSerialNumber": "45051", + "StationName": "PHILIPS-JJJ61LI", + "BodyPartExamined": "CSPINE", + "PatientPosition": "HFS", + "ProcedureStepDescription": "Smith_136538", + "SoftwareVersions": "5.5.0_5.5.0.0", + "MRAcquisitionType": "3D", + "SeriesDescription": "T1w", + "ProtocolName": "WIP_T1w", + "ScanningSequence": "GR", + "SequenceVariant": "MP", + "ScanOptions": "OTHER", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "FFE", + "M", + "FFE" + ], + "SeriesNumber": 201, + "AcquisitionTime": "11:09:2.630000", + "AcquisitionNumber": 2, + "PhilipsRescaleSlope": 3.31062, + "PhilipsRescaleIntercept": 0, + "PhilipsScaleSlope": 0.00386541, + "UsePhilipsFloatNotDisplayScaling": 1, + "SliceThickness": 1, + "SpacingBetweenSlices": 1, + "EchoTime": 0.003703, + "RepetitionTime": 0.0080795, + "FlipAngle": 9, + "CoilString": "MULTI_COIL", + "PartialFourier": 0.76875, + "PercentPhaseFOV": 81.25, + "EchoTrainLength": 246, + "PhaseEncodingSteps": 320, + "AcquisitionMatrixPE": 320, + "ReconMatrixPE": 320, + "PixelBandwidth": 191.483, + "ImageOrientationPatientDICOM": [ + -0.00104504, + 0.999974, + 0.00706934, + 0.00306264, + 0.00707251, + -0.99997 + ], + "InPlanePhaseEncodingDirectionDICOM": "ROW", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181022 GCC4.8.5", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-vuiisIngenia03/anat/sub-vuiisIngenia03_space-other_T2star.json b/derivatives/data_preprocessed/sub-vuiisIngenia03/anat/sub-vuiisIngenia03_space-other_T2star.json index b8343496b9..3e1e09dc2f 100644 --- a/derivatives/data_preprocessed/sub-vuiisIngenia03/anat/sub-vuiisIngenia03_space-other_T2star.json +++ b/derivatives/data_preprocessed/sub-vuiisIngenia03/anat/sub-vuiisIngenia03_space-other_T2star.json @@ -60,5 +60,9 @@ "InPlanePhaseEncodingDirectionDICOM": "COL", "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20181022 GCC4.8.5", - "AcquisitionDuration": 242.5 + "AcquisitionDuration": 242.5, + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-vuiisIngenia03/anat/sub-vuiisIngenia03_space-other_T2w.json b/derivatives/data_preprocessed/sub-vuiisIngenia03/anat/sub-vuiisIngenia03_space-other_T2w.json index 3cf0e7c140..a5e659c469 100644 --- a/derivatives/data_preprocessed/sub-vuiisIngenia03/anat/sub-vuiisIngenia03_space-other_T2w.json +++ b/derivatives/data_preprocessed/sub-vuiisIngenia03/anat/sub-vuiisIngenia03_space-other_T2w.json @@ -1,53 +1,65 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 127.771, - "Manufacturer": "Philips", - "ManufacturersModelName": "Ingenia_Elition_X", - "InstitutionName": "VANDERBILT_INSTITUTE_OF_IMAGING", - "InstitutionalDepartmentName": "MRI_DEPT.", - "InstitutionAddress": "1161_21ST_AVE._SOUTH", - "DeviceSerialNumber": "45051", - "StationName": "PHILIPS-JJJ61LI", - "BodyPartExamined": "CSPINE", - "PatientPosition": "HFS", - "ProcedureStepDescription": "Smith_136538", - "SoftwareVersions": "5.5.0_5.5.0.0", - "MRAcquisitionType": "3D", - "SeriesDescription": "T2w", - "ProtocolName": "WIP_T2w", - "ScanningSequence": "SE", - "SequenceVariant": "SK", - "ScanOptions": "PFP", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "SE", "M", "SE"], - "SeriesNumber": 301, - "AcquisitionTime": "11:13:47.960000", - "AcquisitionNumber": 3, - "PhilipsRescaleSlope": 1.37558, - "PhilipsRescaleIntercept": 0, - "PhilipsScaleSlope": 0.00122031, - "UsePhilipsFloatNotDisplayScaling": 1, - "SliceThickness": 0.8, - "SpacingBetweenSlices": 0.8, - "EchoTime": 0.12, - "RepetitionTime": 3.5, - "FlipAngle": 90, - "CoilString": "MULTI_COIL", - "PartialFourier": 0.288026, - "PercentPhaseFOV": 92.5, - "EchoTrainLength": 89, - "PhaseEncodingSteps": 309, - "AcquisitionMatrixPE": 309, - "ReconMatrixPE": 320, - "PixelBandwidth": 394.571, - "ImageOrientationPatientDICOM": [ - -0.00104504, - 0.999974, - 0.00706934, - 0.00306264, - 0.00707251, - -0.99997 ], - "InPlanePhaseEncodingDirectionDICOM": "ROW", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181022 GCC4.8.5" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 127.771, + "Manufacturer": "Philips", + "ManufacturersModelName": "Ingenia_Elition_X", + "InstitutionName": "VANDERBILT_INSTITUTE_OF_IMAGING", + "InstitutionalDepartmentName": "MRI_DEPT.", + "InstitutionAddress": "1161_21ST_AVE._SOUTH", + "DeviceSerialNumber": "45051", + "StationName": "PHILIPS-JJJ61LI", + "BodyPartExamined": "CSPINE", + "PatientPosition": "HFS", + "ProcedureStepDescription": "Smith_136538", + "SoftwareVersions": "5.5.0_5.5.0.0", + "MRAcquisitionType": "3D", + "SeriesDescription": "T2w", + "ProtocolName": "WIP_T2w", + "ScanningSequence": "SE", + "SequenceVariant": "SK", + "ScanOptions": "PFP", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "SE", + "M", + "SE" + ], + "SeriesNumber": 301, + "AcquisitionTime": "11:13:47.960000", + "AcquisitionNumber": 3, + "PhilipsRescaleSlope": 1.37558, + "PhilipsRescaleIntercept": 0, + "PhilipsScaleSlope": 0.00122031, + "UsePhilipsFloatNotDisplayScaling": 1, + "SliceThickness": 0.8, + "SpacingBetweenSlices": 0.8, + "EchoTime": 0.12, + "RepetitionTime": 3.5, + "FlipAngle": 90, + "CoilString": "MULTI_COIL", + "PartialFourier": 0.288026, + "PercentPhaseFOV": 92.5, + "EchoTrainLength": 89, + "PhaseEncodingSteps": 309, + "AcquisitionMatrixPE": 309, + "ReconMatrixPE": 320, + "PixelBandwidth": 394.571, + "ImageOrientationPatientDICOM": [ + -0.00104504, + 0.999974, + 0.00706934, + 0.00306264, + 0.00707251, + -0.99997 + ], + "InPlanePhaseEncodingDirectionDICOM": "ROW", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181022 GCC4.8.5", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-vuiisIngenia04/anat/sub-vuiisIngenia04_flip-1_mt-on_space-other_MTS.json b/derivatives/data_preprocessed/sub-vuiisIngenia04/anat/sub-vuiisIngenia04_flip-1_mt-on_space-other_MTS.json index 5f6e6ccfc8..be53660835 100644 --- a/derivatives/data_preprocessed/sub-vuiisIngenia04/anat/sub-vuiisIngenia04_flip-1_mt-on_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-vuiisIngenia04/anat/sub-vuiisIngenia04_flip-1_mt-on_space-other_MTS.json @@ -1,52 +1,63 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 127.772, - "Manufacturer": "Philips", - "ManufacturersModelName": "Ingenia_Elition_X", - "InstitutionName": "VANDERBILT_INSTITUTE_OF_IMAGING", - "InstitutionalDepartmentName": "MRI_DEPT.", - "InstitutionAddress": "1161_21ST_AVE._SOUTH", - "DeviceSerialNumber": "45051", - "StationName": "PHILIPS-JJJ61LI", - "BodyPartExamined": "CSPINE", - "PatientPosition": "HFS", - "ProcedureStepDescription": "Smith_136629", - "SoftwareVersions": "5.5.0_5.5.0.0", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-MT", - "ProtocolName": "WIP_GRE-MT", - "ScanningSequence": "GR", - "SequenceVariant": "SP", - "ScanOptions": "PFF", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "FFE", "M", "FFE"], - "SeriesNumber": 601, - "AcquisitionTime": "14:34:57.640000", - "AcquisitionNumber": 6, - "PhilipsRescaleSlope": 2.15629, - "PhilipsRescaleIntercept": 0, - "PhilipsScaleSlope": 0.000506777, - "UsePhilipsFloatNotDisplayScaling": 1, - "SliceThickness": 5, - "SpacingBetweenSlices": 5, - "EchoTime": 0.002001, - "RepetitionTime": 0.057, - "FlipAngle": 9, - "CoilString": "MULTI_COIL", - "PartialFourier": 0.00390625, - "PercentPhaseFOV": 100, - "PhaseEncodingSteps": 256, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 256, - "PixelBandwidth": 261.113, - "ImageOrientationPatientDICOM": [ - 0.999908, - 0.00102336, - 0.0135166, - -0.00248224, - 0.994108, - 0.108362 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181022 GCC4.8.5" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 127.772, + "Manufacturer": "Philips", + "ManufacturersModelName": "Ingenia_Elition_X", + "InstitutionName": "VANDERBILT_INSTITUTE_OF_IMAGING", + "InstitutionalDepartmentName": "MRI_DEPT.", + "InstitutionAddress": "1161_21ST_AVE._SOUTH", + "DeviceSerialNumber": "45051", + "StationName": "PHILIPS-JJJ61LI", + "BodyPartExamined": "CSPINE", + "PatientPosition": "HFS", + "ProcedureStepDescription": "Smith_136629", + "SoftwareVersions": "5.5.0_5.5.0.0", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-MT", + "ProtocolName": "WIP_GRE-MT", + "ScanningSequence": "GR", + "SequenceVariant": "SP", + "ScanOptions": "PFF", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "FFE", + "M", + "FFE" + ], + "SeriesNumber": 601, + "AcquisitionTime": "14:34:57.640000", + "AcquisitionNumber": 6, + "PhilipsRescaleSlope": 2.15629, + "PhilipsRescaleIntercept": 0, + "PhilipsScaleSlope": 0.000506777, + "UsePhilipsFloatNotDisplayScaling": 1, + "SliceThickness": 5, + "SpacingBetweenSlices": 5, + "EchoTime": 0.002001, + "RepetitionTime": 0.057, + "FlipAngle": 9, + "CoilString": "MULTI_COIL", + "PartialFourier": 0.00390625, + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 256, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "PixelBandwidth": 261.113, + "ImageOrientationPatientDICOM": [ + 0.999908, + 0.00102336, + 0.0135166, + -0.00248224, + 0.994108, + 0.108362 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181022 GCC4.8.5", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-vuiisIngenia04/anat/sub-vuiisIngenia04_flip-2_mt-off_space-other_MTS.json b/derivatives/data_preprocessed/sub-vuiisIngenia04/anat/sub-vuiisIngenia04_flip-2_mt-off_space-other_MTS.json index 4a522d41cf..c6af0131ce 100644 --- a/derivatives/data_preprocessed/sub-vuiisIngenia04/anat/sub-vuiisIngenia04_flip-2_mt-off_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-vuiisIngenia04/anat/sub-vuiisIngenia04_flip-2_mt-off_space-other_MTS.json @@ -1,52 +1,63 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 127.772, - "Manufacturer": "Philips", - "ManufacturersModelName": "Ingenia_Elition_X", - "InstitutionName": "VANDERBILT_INSTITUTE_OF_IMAGING", - "InstitutionalDepartmentName": "MRI_DEPT.", - "InstitutionAddress": "1161_21ST_AVE._SOUTH", - "DeviceSerialNumber": "45051", - "StationName": "PHILIPS-JJJ61LI", - "BodyPartExamined": "CSPINE", - "PatientPosition": "HFS", - "ProcedureStepDescription": "Smith_136629", - "SoftwareVersions": "5.5.0_5.5.0.0", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-T1", - "ProtocolName": "WIP_GRE-T1", - "ScanningSequence": "GR", - "SequenceVariant": "SP", - "ScanOptions": "PFF", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "FFE", "M", "FFE"], - "SeriesNumber": 701, - "AcquisitionTime": "14:39:50.130000", - "AcquisitionNumber": 7, - "PhilipsRescaleSlope": 2.30574, - "PhilipsRescaleIntercept": 0, - "PhilipsScaleSlope": 0.000506777, - "UsePhilipsFloatNotDisplayScaling": 1, - "SliceThickness": 5, - "SpacingBetweenSlices": 5, - "EchoTime": 0.002001, - "RepetitionTime": 0.015, - "FlipAngle": 15, - "CoilString": "MULTI_COIL", - "PartialFourier": 0.00390625, - "PercentPhaseFOV": 100, - "PhaseEncodingSteps": 256, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 256, - "PixelBandwidth": 261.113, - "ImageOrientationPatientDICOM": [ - 0.999908, - 0.00102336, - 0.0135166, - -0.00248224, - 0.994108, - 0.108362 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181022 GCC4.8.5" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 127.772, + "Manufacturer": "Philips", + "ManufacturersModelName": "Ingenia_Elition_X", + "InstitutionName": "VANDERBILT_INSTITUTE_OF_IMAGING", + "InstitutionalDepartmentName": "MRI_DEPT.", + "InstitutionAddress": "1161_21ST_AVE._SOUTH", + "DeviceSerialNumber": "45051", + "StationName": "PHILIPS-JJJ61LI", + "BodyPartExamined": "CSPINE", + "PatientPosition": "HFS", + "ProcedureStepDescription": "Smith_136629", + "SoftwareVersions": "5.5.0_5.5.0.0", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-T1", + "ProtocolName": "WIP_GRE-T1", + "ScanningSequence": "GR", + "SequenceVariant": "SP", + "ScanOptions": "PFF", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "FFE", + "M", + "FFE" + ], + "SeriesNumber": 701, + "AcquisitionTime": "14:39:50.130000", + "AcquisitionNumber": 7, + "PhilipsRescaleSlope": 2.30574, + "PhilipsRescaleIntercept": 0, + "PhilipsScaleSlope": 0.000506777, + "UsePhilipsFloatNotDisplayScaling": 1, + "SliceThickness": 5, + "SpacingBetweenSlices": 5, + "EchoTime": 0.002001, + "RepetitionTime": 0.015, + "FlipAngle": 15, + "CoilString": "MULTI_COIL", + "PartialFourier": 0.00390625, + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 256, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "PixelBandwidth": 261.113, + "ImageOrientationPatientDICOM": [ + 0.999908, + 0.00102336, + 0.0135166, + -0.00248224, + 0.994108, + 0.108362 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181022 GCC4.8.5", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-vuiisIngenia04/anat/sub-vuiisIngenia04_space-other_T1w.json b/derivatives/data_preprocessed/sub-vuiisIngenia04/anat/sub-vuiisIngenia04_space-other_T1w.json index f6a1a80d56..cedf156243 100644 --- a/derivatives/data_preprocessed/sub-vuiisIngenia04/anat/sub-vuiisIngenia04_space-other_T1w.json +++ b/derivatives/data_preprocessed/sub-vuiisIngenia04/anat/sub-vuiisIngenia04_space-other_T1w.json @@ -1,53 +1,65 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 127.771, - "Manufacturer": "Philips", - "ManufacturersModelName": "Ingenia_Elition_X", - "InstitutionName": "VANDERBILT_INSTITUTE_OF_IMAGING", - "InstitutionalDepartmentName": "MRI_DEPT.", - "InstitutionAddress": "1161_21ST_AVE._SOUTH", - "DeviceSerialNumber": "45051", - "StationName": "PHILIPS-JJJ61LI", - "BodyPartExamined": "CSPINE", - "PatientPosition": "HFS", - "ProcedureStepDescription": "Smith_136629", - "SoftwareVersions": "5.5.0_5.5.0.0", - "MRAcquisitionType": "3D", - "SeriesDescription": "T1w", - "ProtocolName": "WIP_T1w", - "ScanningSequence": "GR", - "SequenceVariant": "MP", - "ScanOptions": "OTHER", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "FFE", "M", "FFE"], - "SeriesNumber": 301, - "AcquisitionTime": "14:09:36.330000", - "AcquisitionNumber": 3, - "PhilipsRescaleSlope": 3.79072, - "PhilipsRescaleIntercept": 0, - "PhilipsScaleSlope": 0.00324152, - "UsePhilipsFloatNotDisplayScaling": 1, - "SliceThickness": 1, - "SpacingBetweenSlices": 1, - "EchoTime": 0.003704, - "RepetitionTime": 0.0080824, - "FlipAngle": 9, - "CoilString": "MULTI_COIL", - "PartialFourier": 0.76875, - "PercentPhaseFOV": 81.25, - "EchoTrainLength": 246, - "PhaseEncodingSteps": 320, - "AcquisitionMatrixPE": 320, - "ReconMatrixPE": 320, - "PixelBandwidth": 191.483, - "ImageOrientationPatientDICOM": [ - -0.00111884, - 0.999974, - 0.00705803, - 0.013509, - 0.00707251, - -0.999884 ], - "InPlanePhaseEncodingDirectionDICOM": "ROW", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181022 GCC4.8.5" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 127.771, + "Manufacturer": "Philips", + "ManufacturersModelName": "Ingenia_Elition_X", + "InstitutionName": "VANDERBILT_INSTITUTE_OF_IMAGING", + "InstitutionalDepartmentName": "MRI_DEPT.", + "InstitutionAddress": "1161_21ST_AVE._SOUTH", + "DeviceSerialNumber": "45051", + "StationName": "PHILIPS-JJJ61LI", + "BodyPartExamined": "CSPINE", + "PatientPosition": "HFS", + "ProcedureStepDescription": "Smith_136629", + "SoftwareVersions": "5.5.0_5.5.0.0", + "MRAcquisitionType": "3D", + "SeriesDescription": "T1w", + "ProtocolName": "WIP_T1w", + "ScanningSequence": "GR", + "SequenceVariant": "MP", + "ScanOptions": "OTHER", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "FFE", + "M", + "FFE" + ], + "SeriesNumber": 301, + "AcquisitionTime": "14:09:36.330000", + "AcquisitionNumber": 3, + "PhilipsRescaleSlope": 3.79072, + "PhilipsRescaleIntercept": 0, + "PhilipsScaleSlope": 0.00324152, + "UsePhilipsFloatNotDisplayScaling": 1, + "SliceThickness": 1, + "SpacingBetweenSlices": 1, + "EchoTime": 0.003704, + "RepetitionTime": 0.0080824, + "FlipAngle": 9, + "CoilString": "MULTI_COIL", + "PartialFourier": 0.76875, + "PercentPhaseFOV": 81.25, + "EchoTrainLength": 246, + "PhaseEncodingSteps": 320, + "AcquisitionMatrixPE": 320, + "ReconMatrixPE": 320, + "PixelBandwidth": 191.483, + "ImageOrientationPatientDICOM": [ + -0.00111884, + 0.999974, + 0.00705803, + 0.013509, + 0.00707251, + -0.999884 + ], + "InPlanePhaseEncodingDirectionDICOM": "ROW", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181022 GCC4.8.5", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-vuiisIngenia04/anat/sub-vuiisIngenia04_space-other_T2star.json b/derivatives/data_preprocessed/sub-vuiisIngenia04/anat/sub-vuiisIngenia04_space-other_T2star.json index c70e8c44ad..b69427fc97 100644 --- a/derivatives/data_preprocessed/sub-vuiisIngenia04/anat/sub-vuiisIngenia04_space-other_T2star.json +++ b/derivatives/data_preprocessed/sub-vuiisIngenia04/anat/sub-vuiisIngenia04_space-other_T2star.json @@ -60,5 +60,9 @@ "InPlanePhaseEncodingDirectionDICOM": "COL", "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20181022 GCC4.8.5", - "AcquisitionDuration": 242.5 + "AcquisitionDuration": 242.5, + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-vuiisIngenia04/anat/sub-vuiisIngenia04_space-other_T2w.json b/derivatives/data_preprocessed/sub-vuiisIngenia04/anat/sub-vuiisIngenia04_space-other_T2w.json index 5cafe572c3..4b50e71d9e 100644 --- a/derivatives/data_preprocessed/sub-vuiisIngenia04/anat/sub-vuiisIngenia04_space-other_T2w.json +++ b/derivatives/data_preprocessed/sub-vuiisIngenia04/anat/sub-vuiisIngenia04_space-other_T2w.json @@ -1,53 +1,65 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 127.771, - "Manufacturer": "Philips", - "ManufacturersModelName": "Ingenia_Elition_X", - "InstitutionName": "VANDERBILT_INSTITUTE_OF_IMAGING", - "InstitutionalDepartmentName": "MRI_DEPT.", - "InstitutionAddress": "1161_21ST_AVE._SOUTH", - "DeviceSerialNumber": "45051", - "StationName": "PHILIPS-JJJ61LI", - "BodyPartExamined": "CSPINE", - "PatientPosition": "HFS", - "ProcedureStepDescription": "Smith_136629", - "SoftwareVersions": "5.5.0_5.5.0.0", - "MRAcquisitionType": "3D", - "SeriesDescription": "T2w", - "ProtocolName": "WIP_T2w", - "ScanningSequence": "SE", - "SequenceVariant": "SK", - "ScanOptions": "PFP", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "SE", "M", "SE"], - "SeriesNumber": 401, - "AcquisitionTime": "14:15:34.820000", - "AcquisitionNumber": 4, - "PhilipsRescaleSlope": 1.36948, - "PhilipsRescaleIntercept": 0, - "PhilipsScaleSlope": 0.00115388, - "UsePhilipsFloatNotDisplayScaling": 1, - "SliceThickness": 0.8, - "SpacingBetweenSlices": 0.8, - "EchoTime": 0.12, - "RepetitionTime": 3.5, - "FlipAngle": 90, - "CoilString": "MULTI_COIL", - "PartialFourier": 0.288026, - "PercentPhaseFOV": 92.5, - "EchoTrainLength": 89, - "PhaseEncodingSteps": 309, - "AcquisitionMatrixPE": 309, - "ReconMatrixPE": 320, - "PixelBandwidth": 394.571, - "ImageOrientationPatientDICOM": [ - -0.00111884, - 0.999974, - 0.00705803, - 0.013509, - 0.00707251, - -0.999884 ], - "InPlanePhaseEncodingDirectionDICOM": "ROW", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181022 GCC4.8.5" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 127.771, + "Manufacturer": "Philips", + "ManufacturersModelName": "Ingenia_Elition_X", + "InstitutionName": "VANDERBILT_INSTITUTE_OF_IMAGING", + "InstitutionalDepartmentName": "MRI_DEPT.", + "InstitutionAddress": "1161_21ST_AVE._SOUTH", + "DeviceSerialNumber": "45051", + "StationName": "PHILIPS-JJJ61LI", + "BodyPartExamined": "CSPINE", + "PatientPosition": "HFS", + "ProcedureStepDescription": "Smith_136629", + "SoftwareVersions": "5.5.0_5.5.0.0", + "MRAcquisitionType": "3D", + "SeriesDescription": "T2w", + "ProtocolName": "WIP_T2w", + "ScanningSequence": "SE", + "SequenceVariant": "SK", + "ScanOptions": "PFP", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "SE", + "M", + "SE" + ], + "SeriesNumber": 401, + "AcquisitionTime": "14:15:34.820000", + "AcquisitionNumber": 4, + "PhilipsRescaleSlope": 1.36948, + "PhilipsRescaleIntercept": 0, + "PhilipsScaleSlope": 0.00115388, + "UsePhilipsFloatNotDisplayScaling": 1, + "SliceThickness": 0.8, + "SpacingBetweenSlices": 0.8, + "EchoTime": 0.12, + "RepetitionTime": 3.5, + "FlipAngle": 90, + "CoilString": "MULTI_COIL", + "PartialFourier": 0.288026, + "PercentPhaseFOV": 92.5, + "EchoTrainLength": 89, + "PhaseEncodingSteps": 309, + "AcquisitionMatrixPE": 309, + "ReconMatrixPE": 320, + "PixelBandwidth": 394.571, + "ImageOrientationPatientDICOM": [ + -0.00111884, + 0.999974, + 0.00705803, + 0.013509, + 0.00707251, + -0.999884 + ], + "InPlanePhaseEncodingDirectionDICOM": "ROW", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181022 GCC4.8.5", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-vuiisIngenia05/anat/sub-vuiisIngenia05_flip-1_mt-on_space-other_MTS.json b/derivatives/data_preprocessed/sub-vuiisIngenia05/anat/sub-vuiisIngenia05_flip-1_mt-on_space-other_MTS.json index 626c5103ca..4872e197a9 100644 --- a/derivatives/data_preprocessed/sub-vuiisIngenia05/anat/sub-vuiisIngenia05_flip-1_mt-on_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-vuiisIngenia05/anat/sub-vuiisIngenia05_flip-1_mt-on_space-other_MTS.json @@ -1,51 +1,62 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 127.771, - "Manufacturer": "Philips", - "ManufacturersModelName": "Ingenia_Elition_X", - "InstitutionName": "VANDERBILT_INSTITUTE_OF_IMAGING", - "InstitutionalDepartmentName": "MRI_DEPT.", - "InstitutionAddress": "1161_21ST_AVE._SOUTH", - "DeviceSerialNumber": "45051", - "StationName": "PHILIPS-JJJ61LI", - "BodyPartExamined": "CSPINE", - "PatientPosition": "HFS", - "SoftwareVersions": "5.5.0_5.5.0.0", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-MT", - "ProtocolName": "WIP_GRE-MT", - "ScanningSequence": "GR", - "SequenceVariant": "SP", - "ScanOptions": "PFF", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "FFE", "M", "FFE"], - "SeriesNumber": 501, - "AcquisitionTime": "11:37:35.580000", - "AcquisitionNumber": 5, - "PhilipsRescaleSlope": 4.92503, - "PhilipsRescaleIntercept": 0, - "PhilipsScaleSlope": 0.000170065, - "UsePhilipsFloatNotDisplayScaling": 1, - "SliceThickness": 5, - "SpacingBetweenSlices": 5, - "EchoTime": 0.002001, - "RepetitionTime": 0.057, - "FlipAngle": 9, - "CoilString": "MULTI_COIL", - "PartialFourier": 0.00390625, - "PercentPhaseFOV": 100, - "PhaseEncodingSteps": 256, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 256, - "PixelBandwidth": 261.113, - "ImageOrientationPatientDICOM": [ - 0.999258, - 0.000430915, - 0.038524, - -0.00581657, - 0.990163, - 0.139798 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181022 GCC4.8.5" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 127.771, + "Manufacturer": "Philips", + "ManufacturersModelName": "Ingenia_Elition_X", + "InstitutionName": "VANDERBILT_INSTITUTE_OF_IMAGING", + "InstitutionalDepartmentName": "MRI_DEPT.", + "InstitutionAddress": "1161_21ST_AVE._SOUTH", + "DeviceSerialNumber": "45051", + "StationName": "PHILIPS-JJJ61LI", + "BodyPartExamined": "CSPINE", + "PatientPosition": "HFS", + "SoftwareVersions": "5.5.0_5.5.0.0", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-MT", + "ProtocolName": "WIP_GRE-MT", + "ScanningSequence": "GR", + "SequenceVariant": "SP", + "ScanOptions": "PFF", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "FFE", + "M", + "FFE" + ], + "SeriesNumber": 501, + "AcquisitionTime": "11:37:35.580000", + "AcquisitionNumber": 5, + "PhilipsRescaleSlope": 4.92503, + "PhilipsRescaleIntercept": 0, + "PhilipsScaleSlope": 0.000170065, + "UsePhilipsFloatNotDisplayScaling": 1, + "SliceThickness": 5, + "SpacingBetweenSlices": 5, + "EchoTime": 0.002001, + "RepetitionTime": 0.057, + "FlipAngle": 9, + "CoilString": "MULTI_COIL", + "PartialFourier": 0.00390625, + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 256, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "PixelBandwidth": 261.113, + "ImageOrientationPatientDICOM": [ + 0.999258, + 0.000430915, + 0.038524, + -0.00581657, + 0.990163, + 0.139798 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181022 GCC4.8.5", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-vuiisIngenia05/anat/sub-vuiisIngenia05_flip-2_mt-off_space-other_MTS.json b/derivatives/data_preprocessed/sub-vuiisIngenia05/anat/sub-vuiisIngenia05_flip-2_mt-off_space-other_MTS.json index f5e4f0f034..2da7c4105a 100644 --- a/derivatives/data_preprocessed/sub-vuiisIngenia05/anat/sub-vuiisIngenia05_flip-2_mt-off_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-vuiisIngenia05/anat/sub-vuiisIngenia05_flip-2_mt-off_space-other_MTS.json @@ -1,51 +1,62 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 127.772, - "Manufacturer": "Philips", - "ManufacturersModelName": "Ingenia_Elition_X", - "InstitutionName": "VANDERBILT_INSTITUTE_OF_IMAGING", - "InstitutionalDepartmentName": "MRI_DEPT.", - "InstitutionAddress": "1161_21ST_AVE._SOUTH", - "DeviceSerialNumber": "45051", - "StationName": "PHILIPS-JJJ61LI", - "BodyPartExamined": "CSPINE", - "PatientPosition": "HFS", - "SoftwareVersions": "5.5.0_5.5.0.0", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-T1", - "ProtocolName": "WIP_GRE-T1", - "ScanningSequence": "GR", - "SequenceVariant": "SP", - "ScanOptions": "PFF", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "FFE", "M", "FFE"], - "SeriesNumber": 601, - "AcquisitionTime": "11:42:28.500000", - "AcquisitionNumber": 6, - "PhilipsRescaleSlope": 5.59145, - "PhilipsRescaleIntercept": 0, - "PhilipsScaleSlope": 0.000170065, - "UsePhilipsFloatNotDisplayScaling": 1, - "SliceThickness": 5, - "SpacingBetweenSlices": 5, - "EchoTime": 0.002001, - "RepetitionTime": 0.015, - "FlipAngle": 15, - "CoilString": "MULTI_COIL", - "PartialFourier": 0.00390625, - "PercentPhaseFOV": 100, - "PhaseEncodingSteps": 256, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 256, - "PixelBandwidth": 261.113, - "ImageOrientationPatientDICOM": [ - 0.999258, - 0.000430915, - 0.038524, - -0.00581657, - 0.990163, - 0.139798 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181022 GCC4.8.5" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 127.772, + "Manufacturer": "Philips", + "ManufacturersModelName": "Ingenia_Elition_X", + "InstitutionName": "VANDERBILT_INSTITUTE_OF_IMAGING", + "InstitutionalDepartmentName": "MRI_DEPT.", + "InstitutionAddress": "1161_21ST_AVE._SOUTH", + "DeviceSerialNumber": "45051", + "StationName": "PHILIPS-JJJ61LI", + "BodyPartExamined": "CSPINE", + "PatientPosition": "HFS", + "SoftwareVersions": "5.5.0_5.5.0.0", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-T1", + "ProtocolName": "WIP_GRE-T1", + "ScanningSequence": "GR", + "SequenceVariant": "SP", + "ScanOptions": "PFF", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "FFE", + "M", + "FFE" + ], + "SeriesNumber": 601, + "AcquisitionTime": "11:42:28.500000", + "AcquisitionNumber": 6, + "PhilipsRescaleSlope": 5.59145, + "PhilipsRescaleIntercept": 0, + "PhilipsScaleSlope": 0.000170065, + "UsePhilipsFloatNotDisplayScaling": 1, + "SliceThickness": 5, + "SpacingBetweenSlices": 5, + "EchoTime": 0.002001, + "RepetitionTime": 0.015, + "FlipAngle": 15, + "CoilString": "MULTI_COIL", + "PartialFourier": 0.00390625, + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 256, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "PixelBandwidth": 261.113, + "ImageOrientationPatientDICOM": [ + 0.999258, + 0.000430915, + 0.038524, + -0.00581657, + 0.990163, + 0.139798 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181022 GCC4.8.5", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-vuiisIngenia05/anat/sub-vuiisIngenia05_space-other_T1w.json b/derivatives/data_preprocessed/sub-vuiisIngenia05/anat/sub-vuiisIngenia05_space-other_T1w.json index 7fa5537f54..ff40b51239 100644 --- a/derivatives/data_preprocessed/sub-vuiisIngenia05/anat/sub-vuiisIngenia05_space-other_T1w.json +++ b/derivatives/data_preprocessed/sub-vuiisIngenia05/anat/sub-vuiisIngenia05_space-other_T1w.json @@ -1,52 +1,64 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 127.771, - "Manufacturer": "Philips", - "ManufacturersModelName": "Ingenia_Elition_X", - "InstitutionName": "VANDERBILT_INSTITUTE_OF_IMAGING", - "InstitutionalDepartmentName": "MRI_DEPT.", - "InstitutionAddress": "1161_21ST_AVE._SOUTH", - "DeviceSerialNumber": "45051", - "StationName": "PHILIPS-JJJ61LI", - "BodyPartExamined": "CSPINE", - "PatientPosition": "HFS", - "SoftwareVersions": "5.5.0_5.5.0.0", - "MRAcquisitionType": "3D", - "SeriesDescription": "T1w", - "ProtocolName": "WIP_T1w", - "ScanningSequence": "GR", - "SequenceVariant": "MP", - "ScanOptions": "OTHER", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "FFE", "M", "FFE"], - "SeriesNumber": 201, - "AcquisitionTime": "11:14:57.490000", - "AcquisitionNumber": 2, - "PhilipsRescaleSlope": 3.72698, - "PhilipsRescaleIntercept": 0, - "PhilipsScaleSlope": 0.00353352, - "UsePhilipsFloatNotDisplayScaling": 1, - "SliceThickness": 1, - "SpacingBetweenSlices": 1, - "EchoTime": 0.003704, - "RepetitionTime": 0.0080501, - "FlipAngle": 9, - "CoilString": "MULTI_COIL", - "PartialFourier": 0.76875, - "PercentPhaseFOV": 81.25, - "EchoTrainLength": 246, - "PhaseEncodingSteps": 320, - "AcquisitionMatrixPE": 320, - "ReconMatrixPE": 320, - "PixelBandwidth": 191.483, - "ImageOrientationPatientDICOM": [ - -0.00143754, - 0.999974, - 0.00700008, - 0.0588074, - 0.00707251, - -0.998244 ], - "InPlanePhaseEncodingDirectionDICOM": "ROW", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181022 GCC4.8.5" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 127.771, + "Manufacturer": "Philips", + "ManufacturersModelName": "Ingenia_Elition_X", + "InstitutionName": "VANDERBILT_INSTITUTE_OF_IMAGING", + "InstitutionalDepartmentName": "MRI_DEPT.", + "InstitutionAddress": "1161_21ST_AVE._SOUTH", + "DeviceSerialNumber": "45051", + "StationName": "PHILIPS-JJJ61LI", + "BodyPartExamined": "CSPINE", + "PatientPosition": "HFS", + "SoftwareVersions": "5.5.0_5.5.0.0", + "MRAcquisitionType": "3D", + "SeriesDescription": "T1w", + "ProtocolName": "WIP_T1w", + "ScanningSequence": "GR", + "SequenceVariant": "MP", + "ScanOptions": "OTHER", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "FFE", + "M", + "FFE" + ], + "SeriesNumber": 201, + "AcquisitionTime": "11:14:57.490000", + "AcquisitionNumber": 2, + "PhilipsRescaleSlope": 3.72698, + "PhilipsRescaleIntercept": 0, + "PhilipsScaleSlope": 0.00353352, + "UsePhilipsFloatNotDisplayScaling": 1, + "SliceThickness": 1, + "SpacingBetweenSlices": 1, + "EchoTime": 0.003704, + "RepetitionTime": 0.0080501, + "FlipAngle": 9, + "CoilString": "MULTI_COIL", + "PartialFourier": 0.76875, + "PercentPhaseFOV": 81.25, + "EchoTrainLength": 246, + "PhaseEncodingSteps": 320, + "AcquisitionMatrixPE": 320, + "ReconMatrixPE": 320, + "PixelBandwidth": 191.483, + "ImageOrientationPatientDICOM": [ + -0.00143754, + 0.999974, + 0.00700008, + 0.0588074, + 0.00707251, + -0.998244 + ], + "InPlanePhaseEncodingDirectionDICOM": "ROW", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181022 GCC4.8.5", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-vuiisIngenia05/anat/sub-vuiisIngenia05_space-other_T2star.json b/derivatives/data_preprocessed/sub-vuiisIngenia05/anat/sub-vuiisIngenia05_space-other_T2star.json index 6203bf4008..b9ff19b97f 100644 --- a/derivatives/data_preprocessed/sub-vuiisIngenia05/anat/sub-vuiisIngenia05_space-other_T2star.json +++ b/derivatives/data_preprocessed/sub-vuiisIngenia05/anat/sub-vuiisIngenia05_space-other_T2star.json @@ -59,5 +59,9 @@ "InPlanePhaseEncodingDirectionDICOM": "COL", "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20181022 GCC4.8.5", - "AcquisitionDuration": 242.5 + "AcquisitionDuration": 242.5, + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-vuiisIngenia05/anat/sub-vuiisIngenia05_space-other_T2w.json b/derivatives/data_preprocessed/sub-vuiisIngenia05/anat/sub-vuiisIngenia05_space-other_T2w.json index 719c894a84..de9b1b2bc2 100644 --- a/derivatives/data_preprocessed/sub-vuiisIngenia05/anat/sub-vuiisIngenia05_space-other_T2w.json +++ b/derivatives/data_preprocessed/sub-vuiisIngenia05/anat/sub-vuiisIngenia05_space-other_T2w.json @@ -1,52 +1,64 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 127.771, - "Manufacturer": "Philips", - "ManufacturersModelName": "Ingenia_Elition_X", - "InstitutionName": "VANDERBILT_INSTITUTE_OF_IMAGING", - "InstitutionalDepartmentName": "MRI_DEPT.", - "InstitutionAddress": "1161_21ST_AVE._SOUTH", - "DeviceSerialNumber": "45051", - "StationName": "PHILIPS-JJJ61LI", - "BodyPartExamined": "CSPINE", - "PatientPosition": "HFS", - "SoftwareVersions": "5.5.0_5.5.0.0", - "MRAcquisitionType": "3D", - "SeriesDescription": "T2w", - "ProtocolName": "WIP_T2w", - "ScanningSequence": "SE", - "SequenceVariant": "SK", - "ScanOptions": "PFP", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "SE", "M", "SE"], - "SeriesNumber": 301, - "AcquisitionTime": "11:21:1.940000", - "AcquisitionNumber": 3, - "PhilipsRescaleSlope": 1.34432, - "PhilipsRescaleIntercept": 0, - "PhilipsScaleSlope": 0.00117516, - "UsePhilipsFloatNotDisplayScaling": 1, - "SliceThickness": 0.8, - "SpacingBetweenSlices": 0.8, - "EchoTime": 0.12, - "RepetitionTime": 3.5, - "FlipAngle": 90, - "CoilString": 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"T2w", + "ProtocolName": "WIP_T2w", + "ScanningSequence": "SE", + "SequenceVariant": "SK", + "ScanOptions": "PFP", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "SE", + "M", + "SE" + ], + "SeriesNumber": 301, + "AcquisitionTime": "11:21:1.940000", + "AcquisitionNumber": 3, + "PhilipsRescaleSlope": 1.34432, + "PhilipsRescaleIntercept": 0, + "PhilipsScaleSlope": 0.00117516, + "UsePhilipsFloatNotDisplayScaling": 1, + "SliceThickness": 0.8, + "SpacingBetweenSlices": 0.8, + "EchoTime": 0.12, + "RepetitionTime": 3.5, + "FlipAngle": 90, + "CoilString": "MULTI_COIL", + "PartialFourier": 0.288026, + "PercentPhaseFOV": 92.5, + "EchoTrainLength": 89, + "PhaseEncodingSteps": 309, + "AcquisitionMatrixPE": 309, + "ReconMatrixPE": 320, + "PixelBandwidth": 394.571, + "ImageOrientationPatientDICOM": [ + -0.00143754, + 0.999974, + 0.00700008, + 0.0588074, + 0.00707251, + -0.998244 + ], + "InPlanePhaseEncodingDirectionDICOM": "ROW", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181022 GCC4.8.5", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-vuiisIngenia06/anat/sub-vuiisIngenia06_flip-1_mt-on_space-other_MTS.json b/derivatives/data_preprocessed/sub-vuiisIngenia06/anat/sub-vuiisIngenia06_flip-1_mt-on_space-other_MTS.json index e365d79578..bdaffe3370 100644 --- a/derivatives/data_preprocessed/sub-vuiisIngenia06/anat/sub-vuiisIngenia06_flip-1_mt-on_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-vuiisIngenia06/anat/sub-vuiisIngenia06_flip-1_mt-on_space-other_MTS.json @@ -1,52 +1,63 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 127.772, - "Manufacturer": "Philips", - "ManufacturersModelName": "Ingenia_Elition_X", - "InstitutionName": "VANDERBILT_INSTITUTE_OF_IMAGING", - "InstitutionalDepartmentName": "MRI_DEPT.", - "InstitutionAddress": "1161_21ST_AVE._SOUTH", - 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- "ImageOrientationPatientDICOM": [ - 0.999957, - 0.00102336, - 0.00922403, - -0.00108853, - 0.999974, - 0.00706277 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181022 GCC4.8.5" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 127.772, + "Manufacturer": "Philips", + "ManufacturersModelName": "Ingenia_Elition_X", + "InstitutionName": "VANDERBILT_INSTITUTE_OF_IMAGING", + "InstitutionalDepartmentName": "MRI_DEPT.", + "InstitutionAddress": "1161_21ST_AVE._SOUTH", + "DeviceSerialNumber": "45051", + "StationName": "PHILIPS-JJJ61LI", + "BodyPartExamined": "CSPINE", + "PatientPosition": "HFS", + "ProcedureStepDescription": "Smith_136528", + "SoftwareVersions": "5.5.0_5.5.0.0", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-MT", + "ProtocolName": "WIP_GRE-MT", + "ScanningSequence": "GR", + "SequenceVariant": "SP", + "ScanOptions": "PFF", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "FFE", + "M", + "FFE" + ], + "SeriesNumber": 501, + "AcquisitionTime": "14:30:43.860000", + "AcquisitionNumber": 5, + "PhilipsRescaleSlope": 2.4022, + "PhilipsRescaleIntercept": 0, + "PhilipsScaleSlope": 0.000482378, + "UsePhilipsFloatNotDisplayScaling": 1, + "SliceThickness": 5, + "SpacingBetweenSlices": 5, + "EchoTime": 0.002001, + "RepetitionTime": 0.057, + "FlipAngle": 9, + "CoilString": "MULTI_COIL", + "PartialFourier": 0.00390625, + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 256, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "PixelBandwidth": 261.113, + "ImageOrientationPatientDICOM": [ + 0.999957, + 0.00102336, + 0.00922403, + -0.00108853, + 0.999974, + 0.00706277 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181022 GCC4.8.5", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-vuiisIngenia06/anat/sub-vuiisIngenia06_flip-2_mt-off_space-other_MTS.json b/derivatives/data_preprocessed/sub-vuiisIngenia06/anat/sub-vuiisIngenia06_flip-2_mt-off_space-other_MTS.json index 51a680cbde..0e8c4b4fa5 100644 --- a/derivatives/data_preprocessed/sub-vuiisIngenia06/anat/sub-vuiisIngenia06_flip-2_mt-off_space-other_MTS.json +++ b/derivatives/data_preprocessed/sub-vuiisIngenia06/anat/sub-vuiisIngenia06_flip-2_mt-off_space-other_MTS.json @@ -1,52 +1,63 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 127.772, - "Manufacturer": "Philips", - "ManufacturersModelName": "Ingenia_Elition_X", - "InstitutionName": "VANDERBILT_INSTITUTE_OF_IMAGING", - "InstitutionalDepartmentName": "MRI_DEPT.", - "InstitutionAddress": "1161_21ST_AVE._SOUTH", - "DeviceSerialNumber": "45051", - "StationName": "PHILIPS-JJJ61LI", - "BodyPartExamined": "CSPINE", - "PatientPosition": "HFS", - "ProcedureStepDescription": "Smith_136528", - "SoftwareVersions": "5.5.0_5.5.0.0", - "MRAcquisitionType": "3D", - "SeriesDescription": "GRE-T1", - "ProtocolName": "WIP_GRE-T1", - "ScanningSequence": "GR", - "SequenceVariant": "SP", - "ScanOptions": "PFF", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "FFE", "M", "FFE"], - "SeriesNumber": 601, - "AcquisitionTime": "14:35:35.440000", - "AcquisitionNumber": 6, - "PhilipsRescaleSlope": 2.51087, - "PhilipsRescaleIntercept": 0, - "PhilipsScaleSlope": 0.000482378, - "UsePhilipsFloatNotDisplayScaling": 1, - "SliceThickness": 5, - "SpacingBetweenSlices": 5, - "EchoTime": 0.002001, - "RepetitionTime": 0.015, - "FlipAngle": 15, - "CoilString": "MULTI_COIL", - "PartialFourier": 0.00390625, - "PercentPhaseFOV": 100, - "PhaseEncodingSteps": 256, - "AcquisitionMatrixPE": 256, - "ReconMatrixPE": 256, - "PixelBandwidth": 261.113, - "ImageOrientationPatientDICOM": [ - 0.999957, - 0.00102336, - 0.00922403, - -0.00108853, - 0.999974, - 0.00706277 ], - "InPlanePhaseEncodingDirectionDICOM": "COL", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181022 GCC4.8.5" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 127.772, + "Manufacturer": "Philips", + "ManufacturersModelName": "Ingenia_Elition_X", + "InstitutionName": "VANDERBILT_INSTITUTE_OF_IMAGING", + "InstitutionalDepartmentName": "MRI_DEPT.", + "InstitutionAddress": "1161_21ST_AVE._SOUTH", + "DeviceSerialNumber": "45051", + "StationName": "PHILIPS-JJJ61LI", + "BodyPartExamined": "CSPINE", + "PatientPosition": "HFS", + "ProcedureStepDescription": "Smith_136528", + "SoftwareVersions": "5.5.0_5.5.0.0", + "MRAcquisitionType": "3D", + "SeriesDescription": "GRE-T1", + "ProtocolName": "WIP_GRE-T1", + "ScanningSequence": "GR", + "SequenceVariant": "SP", + "ScanOptions": "PFF", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "FFE", + "M", + "FFE" + ], + "SeriesNumber": 601, + "AcquisitionTime": "14:35:35.440000", + "AcquisitionNumber": 6, + "PhilipsRescaleSlope": 2.51087, + "PhilipsRescaleIntercept": 0, + "PhilipsScaleSlope": 0.000482378, + "UsePhilipsFloatNotDisplayScaling": 1, + "SliceThickness": 5, + "SpacingBetweenSlices": 5, + "EchoTime": 0.002001, + "RepetitionTime": 0.015, + "FlipAngle": 15, + "CoilString": "MULTI_COIL", + "PartialFourier": 0.00390625, + "PercentPhaseFOV": 100, + "PhaseEncodingSteps": 256, + "AcquisitionMatrixPE": 256, + "ReconMatrixPE": 256, + "PixelBandwidth": 261.113, + "ImageOrientationPatientDICOM": [ + 0.999957, + 0.00102336, + 0.00922403, + -0.00108853, + 0.999974, + 0.00706277 + ], + "InPlanePhaseEncodingDirectionDICOM": "COL", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181022 GCC4.8.5", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-vuiisIngenia06/anat/sub-vuiisIngenia06_space-other_T1w.json b/derivatives/data_preprocessed/sub-vuiisIngenia06/anat/sub-vuiisIngenia06_space-other_T1w.json index 6ade8ee1b7..63bcf9b80b 100644 --- a/derivatives/data_preprocessed/sub-vuiisIngenia06/anat/sub-vuiisIngenia06_space-other_T1w.json +++ b/derivatives/data_preprocessed/sub-vuiisIngenia06/anat/sub-vuiisIngenia06_space-other_T1w.json @@ -1,53 +1,65 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 127.771, - "Manufacturer": "Philips", - "ManufacturersModelName": "Ingenia_Elition_X", - "InstitutionName": "VANDERBILT_INSTITUTE_OF_IMAGING", - "InstitutionalDepartmentName": "MRI_DEPT.", - "InstitutionAddress": "1161_21ST_AVE._SOUTH", - "DeviceSerialNumber": "45051", - "StationName": "PHILIPS-JJJ61LI", - "BodyPartExamined": "CSPINE", - "PatientPosition": "HFS", - "ProcedureStepDescription": "Smith_136528", - "SoftwareVersions": "5.5.0_5.5.0.0", - "MRAcquisitionType": "3D", - "SeriesDescription": "T1w", - "ProtocolName": "WIP_T1w", - "ScanningSequence": "GR", - "SequenceVariant": "MP", - "ScanOptions": "OTHER", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "FFE", "M", "FFE"], - "SeriesNumber": 201, - "AcquisitionTime": "14:03:54.750000", - "AcquisitionNumber": 2, - "PhilipsRescaleSlope": 3.60317, - "PhilipsRescaleIntercept": 0, - "PhilipsScaleSlope": 0.00335597, - "UsePhilipsFloatNotDisplayScaling": 1, - "SliceThickness": 1, - "SpacingBetweenSlices": 1, - "EchoTime": 0.003702, - "RepetitionTime": 0.0080786, - "FlipAngle": 9, - "CoilString": "MULTI_COIL", - "PartialFourier": 0.76875, - "PercentPhaseFOV": 81.25, - "EchoTrainLength": 246, - "PhaseEncodingSteps": 320, - "AcquisitionMatrixPE": 320, - "ReconMatrixPE": 320, - "PixelBandwidth": 191.483, - "ImageOrientationPatientDICOM": [ - -0.00108853, - 0.999974, - 0.00706277, - 0.00921657, - 0.00707251, - -0.999933 ], - "InPlanePhaseEncodingDirectionDICOM": "ROW", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181022 GCC4.8.5" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 127.771, + "Manufacturer": "Philips", + "ManufacturersModelName": "Ingenia_Elition_X", + "InstitutionName": "VANDERBILT_INSTITUTE_OF_IMAGING", + "InstitutionalDepartmentName": "MRI_DEPT.", + "InstitutionAddress": "1161_21ST_AVE._SOUTH", + "DeviceSerialNumber": "45051", + "StationName": "PHILIPS-JJJ61LI", + "BodyPartExamined": "CSPINE", + "PatientPosition": "HFS", + "ProcedureStepDescription": "Smith_136528", + "SoftwareVersions": "5.5.0_5.5.0.0", + "MRAcquisitionType": "3D", + "SeriesDescription": "T1w", + "ProtocolName": "WIP_T1w", + "ScanningSequence": "GR", + "SequenceVariant": "MP", + "ScanOptions": "OTHER", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "FFE", + "M", + "FFE" + ], + "SeriesNumber": 201, + "AcquisitionTime": "14:03:54.750000", + "AcquisitionNumber": 2, + "PhilipsRescaleSlope": 3.60317, + "PhilipsRescaleIntercept": 0, + "PhilipsScaleSlope": 0.00335597, + "UsePhilipsFloatNotDisplayScaling": 1, + "SliceThickness": 1, + "SpacingBetweenSlices": 1, + "EchoTime": 0.003702, + "RepetitionTime": 0.0080786, + "FlipAngle": 9, + "CoilString": "MULTI_COIL", + "PartialFourier": 0.76875, + "PercentPhaseFOV": 81.25, + "EchoTrainLength": 246, + "PhaseEncodingSteps": 320, + "AcquisitionMatrixPE": 320, + "ReconMatrixPE": 320, + "PixelBandwidth": 191.483, + "ImageOrientationPatientDICOM": [ + -0.00108853, + 0.999974, + 0.00706277, + 0.00921657, + 0.00707251, + -0.999933 + ], + "InPlanePhaseEncodingDirectionDICOM": "ROW", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181022 GCC4.8.5", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-vuiisIngenia06/anat/sub-vuiisIngenia06_space-other_T2star.json b/derivatives/data_preprocessed/sub-vuiisIngenia06/anat/sub-vuiisIngenia06_space-other_T2star.json index 6b65bd1b8d..b093fa95eb 100644 --- a/derivatives/data_preprocessed/sub-vuiisIngenia06/anat/sub-vuiisIngenia06_space-other_T2star.json +++ b/derivatives/data_preprocessed/sub-vuiisIngenia06/anat/sub-vuiisIngenia06_space-other_T2star.json @@ -60,5 +60,9 @@ "InPlanePhaseEncodingDirectionDICOM": "COL", "ConversionSoftware": "dcm2niix", "ConversionSoftwareVersion": "v1.0.20181022 GCC4.8.5", - "AcquisitionDuration": 242.5 + "AcquisitionDuration": 242.5, + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-vuiisIngenia06/anat/sub-vuiisIngenia06_space-other_T2w.json b/derivatives/data_preprocessed/sub-vuiisIngenia06/anat/sub-vuiisIngenia06_space-other_T2w.json index bbc766c4e7..aa7d4cdd2e 100644 --- a/derivatives/data_preprocessed/sub-vuiisIngenia06/anat/sub-vuiisIngenia06_space-other_T2w.json +++ b/derivatives/data_preprocessed/sub-vuiisIngenia06/anat/sub-vuiisIngenia06_space-other_T2w.json @@ -1,53 +1,65 @@ { - "Modality": "MR", - "MagneticFieldStrength": 3, - "ImagingFrequency": 127.771, - "Manufacturer": "Philips", - "ManufacturersModelName": "Ingenia_Elition_X", - "InstitutionName": "VANDERBILT_INSTITUTE_OF_IMAGING", - "InstitutionalDepartmentName": "MRI_DEPT.", - "InstitutionAddress": "1161_21ST_AVE._SOUTH", - "DeviceSerialNumber": "45051", - "StationName": "PHILIPS-JJJ61LI", - "BodyPartExamined": "CSPINE", - "PatientPosition": "HFS", - "ProcedureStepDescription": "Smith_136528", - "SoftwareVersions": "5.5.0_5.5.0.0", - "MRAcquisitionType": "3D", - "SeriesDescription": "T2w", - "ProtocolName": "WIP_T2w", - "ScanningSequence": "SE", - "SequenceVariant": "SK", - "ScanOptions": "PFP", - "ImageType": ["ORIGINAL", "PRIMARY", "M", "SE", "M", "SE"], - "SeriesNumber": 301, - "AcquisitionTime": "14:09:41.950000", - "AcquisitionNumber": 3, - "PhilipsRescaleSlope": 1.45885, - "PhilipsRescaleIntercept": 0, - "PhilipsScaleSlope": 0.00110673, - "UsePhilipsFloatNotDisplayScaling": 1, - "SliceThickness": 0.8, - "SpacingBetweenSlices": 0.8, - "EchoTime": 0.12, - "RepetitionTime": 3.5, - "FlipAngle": 90, - "CoilString": "MULTI_COIL", - "PartialFourier": 0.288026, - "PercentPhaseFOV": 92.5, - "EchoTrainLength": 89, - "PhaseEncodingSteps": 309, - "AcquisitionMatrixPE": 309, - "ReconMatrixPE": 320, - "PixelBandwidth": 394.571, - "ImageOrientationPatientDICOM": [ - -0.00108853, - 0.999974, - 0.00706277, - 0.00921657, - 0.00707251, - -0.999933 ], - "InPlanePhaseEncodingDirectionDICOM": "ROW", - "ConversionSoftware": "dcm2niix", - "ConversionSoftwareVersion": "v1.0.20181022 GCC4.8.5" -} + "Modality": "MR", + "MagneticFieldStrength": 3, + "ImagingFrequency": 127.771, + "Manufacturer": "Philips", + "ManufacturersModelName": "Ingenia_Elition_X", + "InstitutionName": "VANDERBILT_INSTITUTE_OF_IMAGING", + "InstitutionalDepartmentName": "MRI_DEPT.", + "InstitutionAddress": "1161_21ST_AVE._SOUTH", + "DeviceSerialNumber": "45051", + "StationName": "PHILIPS-JJJ61LI", + "BodyPartExamined": "CSPINE", + "PatientPosition": "HFS", + "ProcedureStepDescription": "Smith_136528", + "SoftwareVersions": "5.5.0_5.5.0.0", + "MRAcquisitionType": "3D", + "SeriesDescription": "T2w", + "ProtocolName": "WIP_T2w", + "ScanningSequence": "SE", + "SequenceVariant": "SK", + "ScanOptions": "PFP", + "ImageType": [ + "ORIGINAL", + "PRIMARY", + "M", + "SE", + "M", + "SE" + ], + "SeriesNumber": 301, + "AcquisitionTime": "14:09:41.950000", + "AcquisitionNumber": 3, + "PhilipsRescaleSlope": 1.45885, + "PhilipsRescaleIntercept": 0, + "PhilipsScaleSlope": 0.00110673, + "UsePhilipsFloatNotDisplayScaling": 1, + "SliceThickness": 0.8, + "SpacingBetweenSlices": 0.8, + "EchoTime": 0.12, + "RepetitionTime": 3.5, + "FlipAngle": 90, + "CoilString": "MULTI_COIL", + "PartialFourier": 0.288026, + "PercentPhaseFOV": 92.5, + "EchoTrainLength": 89, + "PhaseEncodingSteps": 309, + "AcquisitionMatrixPE": 309, + "ReconMatrixPE": 320, + "PixelBandwidth": 394.571, + "ImageOrientationPatientDICOM": [ + -0.00108853, + 0.999974, + 0.00706277, + 0.00921657, + 0.00707251, + -0.999933 + ], + "InPlanePhaseEncodingDirectionDICOM": "ROW", + "ConversionSoftware": "dcm2niix", + "ConversionSoftwareVersion": "v1.0.20181022 GCC4.8.5", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/labels/sub-amu01/anat/sub-amu01_flip-1_mt-on_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-amu01/anat/sub-amu01_flip-1_mt-on_space-other_MTS_label-SC_seg.json index e73abc3be8..cd2b6feb96 100644 --- a/derivatives/labels/sub-amu01/anat/sub-amu01_flip-1_mt-on_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-amu01/anat/sub-amu01_flip-1_mt-on_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-07-25 13:48:23" + "Date": "2021-07-25 13:48:23", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-amu01/anat/sub-amu01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-amu01/anat/sub-amu01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-amu01/anat/sub-amu01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-amu01/anat/sub-amu01_flip-2_mt-off_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-amu01/anat/sub-amu01_flip-2_mt-off_space-other_MTS_label-SC_seg.json index eb54ce470d..b35955c2ce 100644 --- a/derivatives/labels/sub-amu01/anat/sub-amu01_flip-2_mt-off_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-amu01/anat/sub-amu01_flip-2_mt-off_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:05:54" + "Date": "2021-06-08 15:05:54", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-amu01/anat/sub-amu01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-amu01/anat/sub-amu01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-amu01/anat/sub-amu01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-amu01/anat/sub-amu01_space-other_T1w_label-SC_seg.json b/derivatives/labels/sub-amu01/anat/sub-amu01_space-other_T1w_label-SC_seg.json index 8572657071..5b37803074 100644 --- a/derivatives/labels/sub-amu01/anat/sub-amu01_space-other_T1w_label-SC_seg.json +++ b/derivatives/labels/sub-amu01/anat/sub-amu01_space-other_T1w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-07-25 13:39:39" + "Date": "2021-07-25 13:39:39", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-amu01/anat/sub-amu01_space-other_T2star_label-SC_seg.json b/derivatives/labels/sub-amu01/anat/sub-amu01_space-other_T2star_label-SC_seg.json index eb54ce470d..6fa8d51c30 100644 --- a/derivatives/labels/sub-amu01/anat/sub-amu01_space-other_T2star_label-SC_seg.json +++ b/derivatives/labels/sub-amu01/anat/sub-amu01_space-other_T2star_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:05:54" + "Date": "2021-06-08 15:05:54", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-amu01/anat/sub-amu01_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-amu01/anat/sub-amu01_space-other_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-amu01/anat/sub-amu01_space-other_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-amu01/anat/sub-amu01_space-other_T2w_label-SC_seg.json b/derivatives/labels/sub-amu01/anat/sub-amu01_space-other_T2w_label-SC_seg.json index eb54ce470d..3f3b0727ca 100644 --- a/derivatives/labels/sub-amu01/anat/sub-amu01_space-other_T2w_label-SC_seg.json +++ b/derivatives/labels/sub-amu01/anat/sub-amu01_space-other_T2w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:05:54" + "Date": "2021-06-08 15:05:54", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-amu01/dwi/sub-amu01_rec-average_dwi_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-amu01/dwi/sub-amu01_rec-average_dwi_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-amu01/dwi/sub-amu01_rec-average_dwi_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-amu02/anat/sub-amu02_flip-1_mt-on_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-amu02/anat/sub-amu02_flip-1_mt-on_space-other_MTS_label-SC_seg.json index eb54ce470d..b35955c2ce 100644 --- a/derivatives/labels/sub-amu02/anat/sub-amu02_flip-1_mt-on_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-amu02/anat/sub-amu02_flip-1_mt-on_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:05:54" + "Date": "2021-06-08 15:05:54", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-amu02/anat/sub-amu02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-amu02/anat/sub-amu02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-amu02/anat/sub-amu02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-amu02/anat/sub-amu02_flip-2_mt-off_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-amu02/anat/sub-amu02_flip-2_mt-off_space-other_MTS_label-SC_seg.json index f2eef9f80f..a6733337a5 100644 --- a/derivatives/labels/sub-amu02/anat/sub-amu02_flip-2_mt-off_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-amu02/anat/sub-amu02_flip-2_mt-off_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-07-25 13:43:47" + "Date": "2021-07-25 13:43:47", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-amu02/anat/sub-amu02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-amu02/anat/sub-amu02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-amu02/anat/sub-amu02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-amu02/anat/sub-amu02_space-other_T1w_label-SC_seg.json b/derivatives/labels/sub-amu02/anat/sub-amu02_space-other_T1w_label-SC_seg.json index aa2a8a252a..2febc579dc 100644 --- a/derivatives/labels/sub-amu02/anat/sub-amu02_space-other_T1w_label-SC_seg.json +++ b/derivatives/labels/sub-amu02/anat/sub-amu02_space-other_T1w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-07-25 13:37:36" + "Date": "2021-07-25 13:37:36", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-amu02/anat/sub-amu02_space-other_T2star_label-SC_seg.json b/derivatives/labels/sub-amu02/anat/sub-amu02_space-other_T2star_label-SC_seg.json index eb54ce470d..6fa8d51c30 100644 --- a/derivatives/labels/sub-amu02/anat/sub-amu02_space-other_T2star_label-SC_seg.json +++ b/derivatives/labels/sub-amu02/anat/sub-amu02_space-other_T2star_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:05:54" + "Date": "2021-06-08 15:05:54", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-amu02/anat/sub-amu02_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-amu02/anat/sub-amu02_space-other_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-amu02/anat/sub-amu02_space-other_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-amu02/anat/sub-amu02_space-other_T2w_label-SC_seg.json b/derivatives/labels/sub-amu02/anat/sub-amu02_space-other_T2w_label-SC_seg.json index 5709188f6c..4c95246c3f 100644 --- a/derivatives/labels/sub-amu02/anat/sub-amu02_space-other_T2w_label-SC_seg.json +++ b/derivatives/labels/sub-amu02/anat/sub-amu02_space-other_T2w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-07-25 13:41:44" + "Date": "2021-07-25 13:41:44", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-amu02/dwi/sub-amu02_rec-average_dwi_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-amu02/dwi/sub-amu02_rec-average_dwi_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-amu02/dwi/sub-amu02_rec-average_dwi_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-amu03/anat/sub-amu03_flip-1_mt-on_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-amu03/anat/sub-amu03_flip-1_mt-on_space-other_MTS_label-SC_seg.json index eb54ce470d..b35955c2ce 100644 --- a/derivatives/labels/sub-amu03/anat/sub-amu03_flip-1_mt-on_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-amu03/anat/sub-amu03_flip-1_mt-on_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:05:54" + "Date": "2021-06-08 15:05:54", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-amu03/anat/sub-amu03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-amu03/anat/sub-amu03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-amu03/anat/sub-amu03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-amu03/anat/sub-amu03_flip-2_mt-off_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-amu03/anat/sub-amu03_flip-2_mt-off_space-other_MTS_label-SC_seg.json index d9f41d72b8..8f3cd2c366 100644 --- a/derivatives/labels/sub-amu03/anat/sub-amu03_flip-2_mt-off_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-amu03/anat/sub-amu03_flip-2_mt-off_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-07-25 13:51:01" + "Date": "2021-07-25 13:51:01", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-amu03/anat/sub-amu03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-amu03/anat/sub-amu03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-amu03/anat/sub-amu03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-amu03/anat/sub-amu03_space-other_T1w_label-SC_seg.json b/derivatives/labels/sub-amu03/anat/sub-amu03_space-other_T1w_label-SC_seg.json index 558001f7e7..5aa1578d89 100644 --- a/derivatives/labels/sub-amu03/anat/sub-amu03_space-other_T1w_label-SC_seg.json +++ b/derivatives/labels/sub-amu03/anat/sub-amu03_space-other_T1w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-07-25 13:40:30" + "Date": "2021-07-25 13:40:30", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-amu03/anat/sub-amu03_space-other_T2star_label-SC_seg.json b/derivatives/labels/sub-amu03/anat/sub-amu03_space-other_T2star_label-SC_seg.json index 2bce3c7fb5..c9b719e14b 100644 --- a/derivatives/labels/sub-amu03/anat/sub-amu03_space-other_T2star_label-SC_seg.json +++ b/derivatives/labels/sub-amu03/anat/sub-amu03_space-other_T2star_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-07-25 13:52:08" + "Date": "2021-07-25 13:52:08", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-amu03/anat/sub-amu03_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-amu03/anat/sub-amu03_space-other_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-amu03/anat/sub-amu03_space-other_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-amu03/anat/sub-amu03_space-other_T2w_label-SC_seg.json b/derivatives/labels/sub-amu03/anat/sub-amu03_space-other_T2w_label-SC_seg.json index e2cf72810b..0d5299f1b5 100644 --- a/derivatives/labels/sub-amu03/anat/sub-amu03_space-other_T2w_label-SC_seg.json +++ b/derivatives/labels/sub-amu03/anat/sub-amu03_space-other_T2w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-07-25 13:44:48" + "Date": "2021-07-25 13:44:48", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-amu03/dwi/sub-amu03_rec-average_dwi_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-amu03/dwi/sub-amu03_rec-average_dwi_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-amu03/dwi/sub-amu03_rec-average_dwi_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-amu04/anat/sub-amu04_flip-1_mt-on_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-amu04/anat/sub-amu04_flip-1_mt-on_space-other_MTS_label-SC_seg.json index eb54ce470d..b35955c2ce 100644 --- a/derivatives/labels/sub-amu04/anat/sub-amu04_flip-1_mt-on_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-amu04/anat/sub-amu04_flip-1_mt-on_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:05:54" + "Date": "2021-06-08 15:05:54", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-amu04/anat/sub-amu04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-amu04/anat/sub-amu04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-amu04/anat/sub-amu04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-amu04/anat/sub-amu04_flip-2_mt-off_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-amu04/anat/sub-amu04_flip-2_mt-off_space-other_MTS_label-SC_seg.json index f3c5893d90..954ecbe81d 100644 --- a/derivatives/labels/sub-amu04/anat/sub-amu04_flip-2_mt-off_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-amu04/anat/sub-amu04_flip-2_mt-off_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Etienne Bergeron", - "Date": "2021-06-14 09:59:46" -} + "Date": "2021-06-14 09:59:46", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/labels/sub-amu04/anat/sub-amu04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-amu04/anat/sub-amu04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-amu04/anat/sub-amu04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-amu04/anat/sub-amu04_space-other_T1w_label-SC_seg.json b/derivatives/labels/sub-amu04/anat/sub-amu04_space-other_T1w_label-SC_seg.json index 899a82a6ca..33cfc7b8c9 100644 --- a/derivatives/labels/sub-amu04/anat/sub-amu04_space-other_T1w_label-SC_seg.json +++ b/derivatives/labels/sub-amu04/anat/sub-amu04_space-other_T1w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Etienne Bergeron", - "Date": "2021-06-12 20:24:16" + "Date": "2021-06-12 20:24:16", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-amu04/anat/sub-amu04_space-other_T2star_label-SC_seg.json b/derivatives/labels/sub-amu04/anat/sub-amu04_space-other_T2star_label-SC_seg.json index eb54ce470d..6fa8d51c30 100644 --- a/derivatives/labels/sub-amu04/anat/sub-amu04_space-other_T2star_label-SC_seg.json +++ b/derivatives/labels/sub-amu04/anat/sub-amu04_space-other_T2star_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:05:54" + "Date": "2021-06-08 15:05:54", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-amu04/anat/sub-amu04_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-amu04/anat/sub-amu04_space-other_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-amu04/anat/sub-amu04_space-other_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-amu04/anat/sub-amu04_space-other_T2w_label-SC_seg.json b/derivatives/labels/sub-amu04/anat/sub-amu04_space-other_T2w_label-SC_seg.json index 6833c847af..5fe0f2e5ae 100644 --- a/derivatives/labels/sub-amu04/anat/sub-amu04_space-other_T2w_label-SC_seg.json +++ b/derivatives/labels/sub-amu04/anat/sub-amu04_space-other_T2w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Etienne Bergeron", - "Date": "2021-06-14 09:59:46" + "Date": "2021-06-14 09:59:46", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-amu04/dwi/sub-amu04_rec-average_dwi_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-amu04/dwi/sub-amu04_rec-average_dwi_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-amu04/dwi/sub-amu04_rec-average_dwi_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-amu05/anat/sub-amu05_flip-1_mt-on_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-amu05/anat/sub-amu05_flip-1_mt-on_space-other_MTS_label-SC_seg.json index eb54ce470d..b35955c2ce 100644 --- a/derivatives/labels/sub-amu05/anat/sub-amu05_flip-1_mt-on_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-amu05/anat/sub-amu05_flip-1_mt-on_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:05:54" + "Date": "2021-06-08 15:05:54", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-amu05/anat/sub-amu05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-amu05/anat/sub-amu05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-amu05/anat/sub-amu05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-amu05/anat/sub-amu05_flip-2_mt-off_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-amu05/anat/sub-amu05_flip-2_mt-off_space-other_MTS_label-SC_seg.json index eb54ce470d..b35955c2ce 100644 --- a/derivatives/labels/sub-amu05/anat/sub-amu05_flip-2_mt-off_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-amu05/anat/sub-amu05_flip-2_mt-off_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:05:54" + "Date": "2021-06-08 15:05:54", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-amu05/anat/sub-amu05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-amu05/anat/sub-amu05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-amu05/anat/sub-amu05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-amu05/anat/sub-amu05_space-other_T1w_label-SC_seg.json b/derivatives/labels/sub-amu05/anat/sub-amu05_space-other_T1w_label-SC_seg.json index 8f8981c071..f01b2c1bcc 100644 --- a/derivatives/labels/sub-amu05/anat/sub-amu05_space-other_T1w_label-SC_seg.json +++ b/derivatives/labels/sub-amu05/anat/sub-amu05_space-other_T1w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Etienne Bergeron", - "Date": "2021-06-12 20:31:41" + "Date": "2021-06-12 20:31:41", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-amu05/anat/sub-amu05_space-other_T2star_label-SC_seg.json b/derivatives/labels/sub-amu05/anat/sub-amu05_space-other_T2star_label-SC_seg.json index eb54ce470d..6fa8d51c30 100644 --- a/derivatives/labels/sub-amu05/anat/sub-amu05_space-other_T2star_label-SC_seg.json +++ b/derivatives/labels/sub-amu05/anat/sub-amu05_space-other_T2star_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:05:54" + "Date": "2021-06-08 15:05:54", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-amu05/anat/sub-amu05_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-amu05/anat/sub-amu05_space-other_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-amu05/anat/sub-amu05_space-other_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-amu05/anat/sub-amu05_space-other_T2w_label-SC_seg.json b/derivatives/labels/sub-amu05/anat/sub-amu05_space-other_T2w_label-SC_seg.json index eb54ce470d..3f3b0727ca 100644 --- a/derivatives/labels/sub-amu05/anat/sub-amu05_space-other_T2w_label-SC_seg.json +++ b/derivatives/labels/sub-amu05/anat/sub-amu05_space-other_T2w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:05:54" + "Date": "2021-06-08 15:05:54", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-amu05/dwi/sub-amu05_rec-average_dwi_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-amu05/dwi/sub-amu05_rec-average_dwi_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-amu05/dwi/sub-amu05_rec-average_dwi_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-balgrist01/anat/sub-balgrist01_flip-1_mt-on_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-balgrist01/anat/sub-balgrist01_flip-1_mt-on_space-other_MTS_label-SC_seg.json index d0a928c00e..123745e525 100644 --- a/derivatives/labels/sub-balgrist01/anat/sub-balgrist01_flip-1_mt-on_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-balgrist01/anat/sub-balgrist01_flip-1_mt-on_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:05:55" + "Date": "2021-06-08 15:05:55", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-balgrist01/anat/sub-balgrist01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-balgrist01/anat/sub-balgrist01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-balgrist01/anat/sub-balgrist01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-balgrist01/anat/sub-balgrist01_flip-2_mt-off_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-balgrist01/anat/sub-balgrist01_flip-2_mt-off_space-other_MTS_label-SC_seg.json index 2c25be8b0b..7994a08f5f 100644 --- a/derivatives/labels/sub-balgrist01/anat/sub-balgrist01_flip-2_mt-off_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-balgrist01/anat/sub-balgrist01_flip-2_mt-off_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-03 10:35:00" + "Date": "2021-06-03 10:35:00", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-balgrist01/anat/sub-balgrist01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-balgrist01/anat/sub-balgrist01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-balgrist01/anat/sub-balgrist01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-balgrist01/anat/sub-balgrist01_space-other_T1w_label-SC_seg.json b/derivatives/labels/sub-balgrist01/anat/sub-balgrist01_space-other_T1w_label-SC_seg.json index 9d7584f2d8..1c872a4f6d 100644 --- a/derivatives/labels/sub-balgrist01/anat/sub-balgrist01_space-other_T1w_label-SC_seg.json +++ b/derivatives/labels/sub-balgrist01/anat/sub-balgrist01_space-other_T1w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Etienne Bergeron", - "Date": "2021-06-14 09:23:02" + "Date": "2021-06-14 09:23:02", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-balgrist01/anat/sub-balgrist01_space-other_T2star_label-SC_seg.json b/derivatives/labels/sub-balgrist01/anat/sub-balgrist01_space-other_T2star_label-SC_seg.json index d0a928c00e..ba60a5f7bf 100644 --- a/derivatives/labels/sub-balgrist01/anat/sub-balgrist01_space-other_T2star_label-SC_seg.json +++ b/derivatives/labels/sub-balgrist01/anat/sub-balgrist01_space-other_T2star_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:05:55" + "Date": "2021-06-08 15:05:55", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-balgrist01/anat/sub-balgrist01_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-balgrist01/anat/sub-balgrist01_space-other_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-balgrist01/anat/sub-balgrist01_space-other_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-balgrist01/anat/sub-balgrist01_space-other_T2w_label-SC_seg.json b/derivatives/labels/sub-balgrist01/anat/sub-balgrist01_space-other_T2w_label-SC_seg.json index d0a928c00e..72d5efc799 100644 --- a/derivatives/labels/sub-balgrist01/anat/sub-balgrist01_space-other_T2w_label-SC_seg.json +++ b/derivatives/labels/sub-balgrist01/anat/sub-balgrist01_space-other_T2w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:05:55" + "Date": "2021-06-08 15:05:55", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-balgrist01/dwi/sub-balgrist01_rec-average_dwi_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-balgrist01/dwi/sub-balgrist01_rec-average_dwi_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-balgrist01/dwi/sub-balgrist01_rec-average_dwi_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-balgrist02/anat/sub-balgrist02_flip-1_mt-on_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-balgrist02/anat/sub-balgrist02_flip-1_mt-on_space-other_MTS_label-SC_seg.json index b41052d77d..65ea824dd1 100644 --- a/derivatives/labels/sub-balgrist02/anat/sub-balgrist02_flip-1_mt-on_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-balgrist02/anat/sub-balgrist02_flip-1_mt-on_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Etienne Bergeron", - "Date": "2021-06-15 09:49:20" + "Date": "2021-06-15 09:49:20", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-balgrist02/anat/sub-balgrist02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-balgrist02/anat/sub-balgrist02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-balgrist02/anat/sub-balgrist02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-balgrist02/anat/sub-balgrist02_flip-2_mt-off_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-balgrist02/anat/sub-balgrist02_flip-2_mt-off_space-other_MTS_label-SC_seg.json index 92b51b3d34..58166b07e3 100644 --- a/derivatives/labels/sub-balgrist02/anat/sub-balgrist02_flip-2_mt-off_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-balgrist02/anat/sub-balgrist02_flip-2_mt-off_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-08-04 11:56:13" + "Date": "2021-08-04 11:56:13", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-balgrist02/anat/sub-balgrist02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-balgrist02/anat/sub-balgrist02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-balgrist02/anat/sub-balgrist02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-balgrist02/anat/sub-balgrist02_space-other_T1w_label-SC_seg.json b/derivatives/labels/sub-balgrist02/anat/sub-balgrist02_space-other_T1w_label-SC_seg.json index e4a661941c..37ab9db4bd 100644 --- a/derivatives/labels/sub-balgrist02/anat/sub-balgrist02_space-other_T1w_label-SC_seg.json +++ b/derivatives/labels/sub-balgrist02/anat/sub-balgrist02_space-other_T1w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Etienne Bergeron", - "Date": "2021-06-12 16:12:33" + "Date": "2021-06-12 16:12:33", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-balgrist02/anat/sub-balgrist02_space-other_T2star_label-SC_seg.json b/derivatives/labels/sub-balgrist02/anat/sub-balgrist02_space-other_T2star_label-SC_seg.json index d0a928c00e..ba60a5f7bf 100644 --- a/derivatives/labels/sub-balgrist02/anat/sub-balgrist02_space-other_T2star_label-SC_seg.json +++ b/derivatives/labels/sub-balgrist02/anat/sub-balgrist02_space-other_T2star_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:05:55" + "Date": "2021-06-08 15:05:55", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-balgrist02/anat/sub-balgrist02_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-balgrist02/anat/sub-balgrist02_space-other_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-balgrist02/anat/sub-balgrist02_space-other_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-balgrist02/anat/sub-balgrist02_space-other_T2w_label-SC_seg.json b/derivatives/labels/sub-balgrist02/anat/sub-balgrist02_space-other_T2w_label-SC_seg.json index 5d20588b80..7860145034 100644 --- a/derivatives/labels/sub-balgrist02/anat/sub-balgrist02_space-other_T2w_label-SC_seg.json +++ b/derivatives/labels/sub-balgrist02/anat/sub-balgrist02_space-other_T2w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Etienne Bergeron", - "Date": "2021-06-14 14:27:30" + "Date": "2021-06-14 14:27:30", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-balgrist02/dwi/sub-balgrist02_rec-average_dwi_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-balgrist02/dwi/sub-balgrist02_rec-average_dwi_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-balgrist02/dwi/sub-balgrist02_rec-average_dwi_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-balgrist03/anat/sub-balgrist03_flip-1_mt-on_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-balgrist03/anat/sub-balgrist03_flip-1_mt-on_space-other_MTS_label-SC_seg.json index f82cb7b13d..2682e3d7e3 100644 --- a/derivatives/labels/sub-balgrist03/anat/sub-balgrist03_flip-1_mt-on_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-balgrist03/anat/sub-balgrist03_flip-1_mt-on_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Etienne Bergeron", - "Date": "2021-06-15 10:06:39" + "Date": "2021-06-15 10:06:39", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-balgrist03/anat/sub-balgrist03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-balgrist03/anat/sub-balgrist03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-balgrist03/anat/sub-balgrist03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-balgrist03/anat/sub-balgrist03_flip-2_mt-off_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-balgrist03/anat/sub-balgrist03_flip-2_mt-off_space-other_MTS_label-SC_seg.json index d0a928c00e..123745e525 100644 --- a/derivatives/labels/sub-balgrist03/anat/sub-balgrist03_flip-2_mt-off_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-balgrist03/anat/sub-balgrist03_flip-2_mt-off_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:05:55" + "Date": "2021-06-08 15:05:55", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-balgrist03/anat/sub-balgrist03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-balgrist03/anat/sub-balgrist03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-balgrist03/anat/sub-balgrist03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-balgrist03/anat/sub-balgrist03_space-other_T1w_label-SC_seg.json b/derivatives/labels/sub-balgrist03/anat/sub-balgrist03_space-other_T1w_label-SC_seg.json index 955926e76b..672f0eb6bf 100644 --- a/derivatives/labels/sub-balgrist03/anat/sub-balgrist03_space-other_T1w_label-SC_seg.json +++ b/derivatives/labels/sub-balgrist03/anat/sub-balgrist03_space-other_T1w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Etienne Bergeron", - "Date": "2021-06-12 20:15:19" + "Date": "2021-06-12 20:15:19", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-balgrist03/anat/sub-balgrist03_space-other_T2star_label-SC_seg.json b/derivatives/labels/sub-balgrist03/anat/sub-balgrist03_space-other_T2star_label-SC_seg.json index 1cbd70d7af..87ad301a06 100644 --- a/derivatives/labels/sub-balgrist03/anat/sub-balgrist03_space-other_T2star_label-SC_seg.json +++ b/derivatives/labels/sub-balgrist03/anat/sub-balgrist03_space-other_T2star_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Etienne Bergeron", - "Date": "2021-06-17 19:09:06" + "Date": "2021-06-17 19:09:06", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-balgrist03/anat/sub-balgrist03_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-balgrist03/anat/sub-balgrist03_space-other_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-balgrist03/anat/sub-balgrist03_space-other_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-balgrist03/anat/sub-balgrist03_space-other_T2w_label-SC_seg.json b/derivatives/labels/sub-balgrist03/anat/sub-balgrist03_space-other_T2w_label-SC_seg.json index 3ee80c33ee..0b14e39408 100644 --- a/derivatives/labels/sub-balgrist03/anat/sub-balgrist03_space-other_T2w_label-SC_seg.json +++ b/derivatives/labels/sub-balgrist03/anat/sub-balgrist03_space-other_T2w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Etienne Bergeron", - "Date": "2021-06-15 09:09:15" + "Date": "2021-06-15 09:09:15", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-balgrist03/dwi/sub-balgrist03_rec-average_dwi_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-balgrist03/dwi/sub-balgrist03_rec-average_dwi_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-balgrist03/dwi/sub-balgrist03_rec-average_dwi_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-balgrist04/anat/sub-balgrist04_flip-1_mt-on_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-balgrist04/anat/sub-balgrist04_flip-1_mt-on_space-other_MTS_label-SC_seg.json index 940abdef41..869312af1a 100644 --- a/derivatives/labels/sub-balgrist04/anat/sub-balgrist04_flip-1_mt-on_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-balgrist04/anat/sub-balgrist04_flip-1_mt-on_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Etienne Bergeron", - "Date": "2021-06-15 09:53:12" + "Date": "2021-06-15 09:53:12", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-balgrist04/anat/sub-balgrist04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-balgrist04/anat/sub-balgrist04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-balgrist04/anat/sub-balgrist04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-balgrist04/anat/sub-balgrist04_flip-2_mt-off_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-balgrist04/anat/sub-balgrist04_flip-2_mt-off_space-other_MTS_label-SC_seg.json index e066fb1fe4..f8bcf66681 100644 --- a/derivatives/labels/sub-balgrist04/anat/sub-balgrist04_flip-2_mt-off_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-balgrist04/anat/sub-balgrist04_flip-2_mt-off_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-08-04 12:41:26" + "Date": "2021-08-04 12:41:26", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-balgrist04/anat/sub-balgrist04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-balgrist04/anat/sub-balgrist04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-balgrist04/anat/sub-balgrist04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-balgrist04/anat/sub-balgrist04_space-other_T1w_label-SC_seg.json b/derivatives/labels/sub-balgrist04/anat/sub-balgrist04_space-other_T1w_label-SC_seg.json index 3d7b20fedb..b65df53cd3 100644 --- a/derivatives/labels/sub-balgrist04/anat/sub-balgrist04_space-other_T1w_label-SC_seg.json +++ b/derivatives/labels/sub-balgrist04/anat/sub-balgrist04_space-other_T1w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Etienne Bergeron", - "Date": "2021-06-11 14:34:11" + "Date": "2021-06-11 14:34:11", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-balgrist04/anat/sub-balgrist04_space-other_T2star_label-SC_seg.json b/derivatives/labels/sub-balgrist04/anat/sub-balgrist04_space-other_T2star_label-SC_seg.json index d0a928c00e..ba60a5f7bf 100644 --- a/derivatives/labels/sub-balgrist04/anat/sub-balgrist04_space-other_T2star_label-SC_seg.json +++ b/derivatives/labels/sub-balgrist04/anat/sub-balgrist04_space-other_T2star_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:05:55" + "Date": "2021-06-08 15:05:55", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-balgrist04/anat/sub-balgrist04_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-balgrist04/anat/sub-balgrist04_space-other_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-balgrist04/anat/sub-balgrist04_space-other_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-balgrist04/anat/sub-balgrist04_space-other_T2w_label-SC_seg.json b/derivatives/labels/sub-balgrist04/anat/sub-balgrist04_space-other_T2w_label-SC_seg.json index e3ee22a2fe..42175592ea 100644 --- a/derivatives/labels/sub-balgrist04/anat/sub-balgrist04_space-other_T2w_label-SC_seg.json +++ b/derivatives/labels/sub-balgrist04/anat/sub-balgrist04_space-other_T2w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Etienne Bergeron", - "Date": "2021-06-14 14:15:27" + "Date": "2021-06-14 14:15:27", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-balgrist04/dwi/sub-balgrist04_rec-average_dwi_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-balgrist04/dwi/sub-balgrist04_rec-average_dwi_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-balgrist04/dwi/sub-balgrist04_rec-average_dwi_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-balgrist05/anat/sub-balgrist05_flip-1_mt-on_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-balgrist05/anat/sub-balgrist05_flip-1_mt-on_space-other_MTS_label-SC_seg.json index 8b7a19a596..bac12ccfce 100644 --- a/derivatives/labels/sub-balgrist05/anat/sub-balgrist05_flip-1_mt-on_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-balgrist05/anat/sub-balgrist05_flip-1_mt-on_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-08-04 11:53:28" + "Date": "2021-08-04 11:53:28", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-balgrist05/anat/sub-balgrist05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-balgrist05/anat/sub-balgrist05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-balgrist05/anat/sub-balgrist05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-balgrist05/anat/sub-balgrist05_flip-2_mt-off_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-balgrist05/anat/sub-balgrist05_flip-2_mt-off_space-other_MTS_label-SC_seg.json index d0a928c00e..123745e525 100644 --- a/derivatives/labels/sub-balgrist05/anat/sub-balgrist05_flip-2_mt-off_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-balgrist05/anat/sub-balgrist05_flip-2_mt-off_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:05:55" + "Date": "2021-06-08 15:05:55", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-balgrist05/anat/sub-balgrist05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-balgrist05/anat/sub-balgrist05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-balgrist05/anat/sub-balgrist05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-balgrist05/anat/sub-balgrist05_space-other_T1w_label-SC_seg.json b/derivatives/labels/sub-balgrist05/anat/sub-balgrist05_space-other_T1w_label-SC_seg.json index c4b784adf7..adc492a833 100644 --- a/derivatives/labels/sub-balgrist05/anat/sub-balgrist05_space-other_T1w_label-SC_seg.json +++ b/derivatives/labels/sub-balgrist05/anat/sub-balgrist05_space-other_T1w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Etienne Bergeron", - "Date": "2021-06-14 09:26:59" + "Date": "2021-06-14 09:26:59", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-balgrist05/anat/sub-balgrist05_space-other_T2star_label-SC_seg.json b/derivatives/labels/sub-balgrist05/anat/sub-balgrist05_space-other_T2star_label-SC_seg.json index d0a928c00e..ba60a5f7bf 100644 --- a/derivatives/labels/sub-balgrist05/anat/sub-balgrist05_space-other_T2star_label-SC_seg.json +++ b/derivatives/labels/sub-balgrist05/anat/sub-balgrist05_space-other_T2star_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:05:55" + "Date": "2021-06-08 15:05:55", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-balgrist05/anat/sub-balgrist05_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-balgrist05/anat/sub-balgrist05_space-other_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-balgrist05/anat/sub-balgrist05_space-other_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-balgrist05/anat/sub-balgrist05_space-other_T2w_label-SC_seg.json b/derivatives/labels/sub-balgrist05/anat/sub-balgrist05_space-other_T2w_label-SC_seg.json index 16aa55b732..cb67c83044 100644 --- a/derivatives/labels/sub-balgrist05/anat/sub-balgrist05_space-other_T2w_label-SC_seg.json +++ b/derivatives/labels/sub-balgrist05/anat/sub-balgrist05_space-other_T2w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Etienne Bergeron", - "Date": "2021-06-15 09:26:52" + "Date": "2021-06-15 09:26:52", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-balgrist05/dwi/sub-balgrist05_rec-average_dwi_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-balgrist05/dwi/sub-balgrist05_rec-average_dwi_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-balgrist05/dwi/sub-balgrist05_rec-average_dwi_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-balgrist06/anat/sub-balgrist06_flip-1_mt-on_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-balgrist06/anat/sub-balgrist06_flip-1_mt-on_space-other_MTS_label-SC_seg.json index d0a928c00e..123745e525 100644 --- a/derivatives/labels/sub-balgrist06/anat/sub-balgrist06_flip-1_mt-on_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-balgrist06/anat/sub-balgrist06_flip-1_mt-on_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:05:55" + "Date": "2021-06-08 15:05:55", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-balgrist06/anat/sub-balgrist06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-balgrist06/anat/sub-balgrist06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-balgrist06/anat/sub-balgrist06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-balgrist06/anat/sub-balgrist06_flip-2_mt-off_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-balgrist06/anat/sub-balgrist06_flip-2_mt-off_space-other_MTS_label-SC_seg.json index d0a928c00e..123745e525 100644 --- a/derivatives/labels/sub-balgrist06/anat/sub-balgrist06_flip-2_mt-off_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-balgrist06/anat/sub-balgrist06_flip-2_mt-off_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:05:55" + "Date": "2021-06-08 15:05:55", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-balgrist06/anat/sub-balgrist06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-balgrist06/anat/sub-balgrist06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-balgrist06/anat/sub-balgrist06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-balgrist06/anat/sub-balgrist06_space-other_T1w_label-SC_seg.json b/derivatives/labels/sub-balgrist06/anat/sub-balgrist06_space-other_T1w_label-SC_seg.json index 6eb21f49a9..6686ef2538 100644 --- a/derivatives/labels/sub-balgrist06/anat/sub-balgrist06_space-other_T1w_label-SC_seg.json +++ b/derivatives/labels/sub-balgrist06/anat/sub-balgrist06_space-other_T1w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Etienne Bergeron", - "Date": "2021-06-11 14:40:11" + "Date": "2021-06-11 14:40:11", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-balgrist06/anat/sub-balgrist06_space-other_T2star_label-SC_seg.json b/derivatives/labels/sub-balgrist06/anat/sub-balgrist06_space-other_T2star_label-SC_seg.json index d0a928c00e..ba60a5f7bf 100644 --- a/derivatives/labels/sub-balgrist06/anat/sub-balgrist06_space-other_T2star_label-SC_seg.json +++ b/derivatives/labels/sub-balgrist06/anat/sub-balgrist06_space-other_T2star_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:05:55" + "Date": "2021-06-08 15:05:55", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-balgrist06/anat/sub-balgrist06_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-balgrist06/anat/sub-balgrist06_space-other_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-balgrist06/anat/sub-balgrist06_space-other_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-balgrist06/anat/sub-balgrist06_space-other_T2w_label-SC_seg.json b/derivatives/labels/sub-balgrist06/anat/sub-balgrist06_space-other_T2w_label-SC_seg.json index d0a928c00e..72d5efc799 100644 --- a/derivatives/labels/sub-balgrist06/anat/sub-balgrist06_space-other_T2w_label-SC_seg.json +++ b/derivatives/labels/sub-balgrist06/anat/sub-balgrist06_space-other_T2w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:05:55" + "Date": "2021-06-08 15:05:55", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-balgrist06/dwi/sub-balgrist06_rec-average_dwi_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-balgrist06/dwi/sub-balgrist06_rec-average_dwi_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-balgrist06/dwi/sub-balgrist06_rec-average_dwi_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-barcelona01/anat/sub-barcelona01_flip-1_mt-on_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-barcelona01/anat/sub-barcelona01_flip-1_mt-on_space-other_MTS_label-SC_seg.json index edc17474ec..95e0b605c7 100644 --- a/derivatives/labels/sub-barcelona01/anat/sub-barcelona01_flip-1_mt-on_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-barcelona01/anat/sub-barcelona01_flip-1_mt-on_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-08-04 11:38:59" + "Date": "2021-08-04 11:38:59", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-barcelona01/anat/sub-barcelona01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-barcelona01/anat/sub-barcelona01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-barcelona01/anat/sub-barcelona01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-barcelona01/anat/sub-barcelona01_flip-2_mt-off_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-barcelona01/anat/sub-barcelona01_flip-2_mt-off_space-other_MTS_label-SC_seg.json index d0a928c00e..123745e525 100644 --- a/derivatives/labels/sub-barcelona01/anat/sub-barcelona01_flip-2_mt-off_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-barcelona01/anat/sub-barcelona01_flip-2_mt-off_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:05:55" + "Date": "2021-06-08 15:05:55", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-barcelona01/anat/sub-barcelona01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-barcelona01/anat/sub-barcelona01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-barcelona01/anat/sub-barcelona01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-barcelona01/anat/sub-barcelona01_space-other_T1w_label-SC_seg.json b/derivatives/labels/sub-barcelona01/anat/sub-barcelona01_space-other_T1w_label-SC_seg.json index 8a270715ca..9d3279569a 100644 --- a/derivatives/labels/sub-barcelona01/anat/sub-barcelona01_space-other_T1w_label-SC_seg.json +++ b/derivatives/labels/sub-barcelona01/anat/sub-barcelona01_space-other_T1w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Etienne Bergeron", - "Date": "2021-06-11 14:28:34" + "Date": "2021-06-11 14:28:34", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-barcelona01/anat/sub-barcelona01_space-other_T2star_label-SC_seg.json b/derivatives/labels/sub-barcelona01/anat/sub-barcelona01_space-other_T2star_label-SC_seg.json index 749a7cb8dc..1a3d0edc7a 100644 --- a/derivatives/labels/sub-barcelona01/anat/sub-barcelona01_space-other_T2star_label-SC_seg.json +++ b/derivatives/labels/sub-barcelona01/anat/sub-barcelona01_space-other_T2star_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Etienne Bergeron", - "Date": "2021-06-17 09:47:14" + "Date": "2021-06-17 09:47:14", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-barcelona01/anat/sub-barcelona01_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-barcelona01/anat/sub-barcelona01_space-other_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-barcelona01/anat/sub-barcelona01_space-other_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-barcelona01/anat/sub-barcelona01_space-other_T2w_label-SC_seg.json b/derivatives/labels/sub-barcelona01/anat/sub-barcelona01_space-other_T2w_label-SC_seg.json index d0a928c00e..72d5efc799 100644 --- a/derivatives/labels/sub-barcelona01/anat/sub-barcelona01_space-other_T2w_label-SC_seg.json +++ b/derivatives/labels/sub-barcelona01/anat/sub-barcelona01_space-other_T2w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:05:55" + "Date": "2021-06-08 15:05:55", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-barcelona01/dwi/sub-barcelona01_rec-average_dwi_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-barcelona01/dwi/sub-barcelona01_rec-average_dwi_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-barcelona01/dwi/sub-barcelona01_rec-average_dwi_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-barcelona02/anat/sub-barcelona02_flip-1_mt-on_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-barcelona02/anat/sub-barcelona02_flip-1_mt-on_space-other_MTS_label-SC_seg.json index 6e56128283..d20bab139b 100644 --- a/derivatives/labels/sub-barcelona02/anat/sub-barcelona02_flip-1_mt-on_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-barcelona02/anat/sub-barcelona02_flip-1_mt-on_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:05:56" + "Date": "2021-06-08 15:05:56", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-barcelona02/anat/sub-barcelona02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-barcelona02/anat/sub-barcelona02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-barcelona02/anat/sub-barcelona02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-barcelona02/anat/sub-barcelona02_flip-2_mt-off_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-barcelona02/anat/sub-barcelona02_flip-2_mt-off_space-other_MTS_label-SC_seg.json index c23e2171e1..b855ed1b6e 100644 --- a/derivatives/labels/sub-barcelona02/anat/sub-barcelona02_flip-2_mt-off_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-barcelona02/anat/sub-barcelona02_flip-2_mt-off_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Etienne Bergeron", - "Date": "2021-06-15 09:32:27" + "Date": "2021-06-15 09:32:27", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-barcelona02/anat/sub-barcelona02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-barcelona02/anat/sub-barcelona02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-barcelona02/anat/sub-barcelona02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-barcelona02/anat/sub-barcelona02_space-other_T1w_label-SC_seg.json b/derivatives/labels/sub-barcelona02/anat/sub-barcelona02_space-other_T1w_label-SC_seg.json index 2d9200d723..0699b6aeaa 100644 --- a/derivatives/labels/sub-barcelona02/anat/sub-barcelona02_space-other_T1w_label-SC_seg.json +++ b/derivatives/labels/sub-barcelona02/anat/sub-barcelona02_space-other_T1w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Etienne Bergeron", - "Date": "2021-06-12 20:13:18" + "Date": "2021-06-12 20:13:18", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-barcelona02/anat/sub-barcelona02_space-other_T2star_label-SC_seg.json b/derivatives/labels/sub-barcelona02/anat/sub-barcelona02_space-other_T2star_label-SC_seg.json index 46bd6130a5..73668433a9 100644 --- a/derivatives/labels/sub-barcelona02/anat/sub-barcelona02_space-other_T2star_label-SC_seg.json +++ b/derivatives/labels/sub-barcelona02/anat/sub-barcelona02_space-other_T2star_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Etienne Bergeron", - "Date": "2021-06-17 10:30:11" + "Date": "2021-06-17 10:30:11", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-barcelona02/anat/sub-barcelona02_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-barcelona02/anat/sub-barcelona02_space-other_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-barcelona02/anat/sub-barcelona02_space-other_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-barcelona02/anat/sub-barcelona02_space-other_T2w_label-SC_seg.json b/derivatives/labels/sub-barcelona02/anat/sub-barcelona02_space-other_T2w_label-SC_seg.json index 6e56128283..25df26e303 100644 --- a/derivatives/labels/sub-barcelona02/anat/sub-barcelona02_space-other_T2w_label-SC_seg.json +++ b/derivatives/labels/sub-barcelona02/anat/sub-barcelona02_space-other_T2w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:05:56" + "Date": "2021-06-08 15:05:56", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-barcelona02/dwi/sub-barcelona02_rec-average_dwi_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-barcelona02/dwi/sub-barcelona02_rec-average_dwi_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-barcelona02/dwi/sub-barcelona02_rec-average_dwi_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-barcelona03/anat/sub-barcelona03_flip-1_mt-on_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-barcelona03/anat/sub-barcelona03_flip-1_mt-on_space-other_MTS_label-SC_seg.json index 6e56128283..d20bab139b 100644 --- a/derivatives/labels/sub-barcelona03/anat/sub-barcelona03_flip-1_mt-on_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-barcelona03/anat/sub-barcelona03_flip-1_mt-on_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:05:56" + "Date": "2021-06-08 15:05:56", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-barcelona03/anat/sub-barcelona03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-barcelona03/anat/sub-barcelona03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-barcelona03/anat/sub-barcelona03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-barcelona03/anat/sub-barcelona03_flip-2_mt-off_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-barcelona03/anat/sub-barcelona03_flip-2_mt-off_space-other_MTS_label-SC_seg.json index 6e56128283..d20bab139b 100644 --- a/derivatives/labels/sub-barcelona03/anat/sub-barcelona03_flip-2_mt-off_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-barcelona03/anat/sub-barcelona03_flip-2_mt-off_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:05:56" + "Date": "2021-06-08 15:05:56", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-barcelona03/anat/sub-barcelona03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-barcelona03/anat/sub-barcelona03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-barcelona03/anat/sub-barcelona03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-barcelona03/anat/sub-barcelona03_space-other_T1w_label-SC_seg.json b/derivatives/labels/sub-barcelona03/anat/sub-barcelona03_space-other_T1w_label-SC_seg.json index f637acdaaa..2657aaeae4 100644 --- a/derivatives/labels/sub-barcelona03/anat/sub-barcelona03_space-other_T1w_label-SC_seg.json +++ b/derivatives/labels/sub-barcelona03/anat/sub-barcelona03_space-other_T1w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Etienne Bergeron", - "Date": "2021-06-11 14:16:57" + "Date": "2021-06-11 14:16:57", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-barcelona03/anat/sub-barcelona03_space-other_T2star_label-SC_seg.json b/derivatives/labels/sub-barcelona03/anat/sub-barcelona03_space-other_T2star_label-SC_seg.json index b127c817e9..bb859dc095 100644 --- a/derivatives/labels/sub-barcelona03/anat/sub-barcelona03_space-other_T2star_label-SC_seg.json +++ b/derivatives/labels/sub-barcelona03/anat/sub-barcelona03_space-other_T2star_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Etienne Bergeron", - "Date": "2021-06-17 09:40:11" + "Date": "2021-06-17 09:40:11", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-barcelona03/anat/sub-barcelona03_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-barcelona03/anat/sub-barcelona03_space-other_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-barcelona03/anat/sub-barcelona03_space-other_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-barcelona03/anat/sub-barcelona03_space-other_T2w_label-SC_seg.json b/derivatives/labels/sub-barcelona03/anat/sub-barcelona03_space-other_T2w_label-SC_seg.json index 39e2c55aaf..13f68af8c3 100644 --- a/derivatives/labels/sub-barcelona03/anat/sub-barcelona03_space-other_T2w_label-SC_seg.json +++ b/derivatives/labels/sub-barcelona03/anat/sub-barcelona03_space-other_T2w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Etienne Bergeron", - "Date": "2021-06-14 09:50:44" + "Date": "2021-06-14 09:50:44", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-barcelona03/dwi/sub-barcelona03_rec-average_dwi_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-barcelona03/dwi/sub-barcelona03_rec-average_dwi_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-barcelona03/dwi/sub-barcelona03_rec-average_dwi_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-barcelona04/anat/sub-barcelona04_flip-1_mt-on_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-barcelona04/anat/sub-barcelona04_flip-1_mt-on_space-other_MTS_label-SC_seg.json index cff17c2acf..77e5e74156 100644 --- a/derivatives/labels/sub-barcelona04/anat/sub-barcelona04_flip-1_mt-on_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-barcelona04/anat/sub-barcelona04_flip-1_mt-on_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Etienne Bergeron", - "Date": "2021-06-15 09:47:01" + "Date": "2021-06-15 09:47:01", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-barcelona04/anat/sub-barcelona04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-barcelona04/anat/sub-barcelona04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-barcelona04/anat/sub-barcelona04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-barcelona04/anat/sub-barcelona04_flip-2_mt-off_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-barcelona04/anat/sub-barcelona04_flip-2_mt-off_space-other_MTS_label-SC_seg.json index 6e56128283..d20bab139b 100644 --- a/derivatives/labels/sub-barcelona04/anat/sub-barcelona04_flip-2_mt-off_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-barcelona04/anat/sub-barcelona04_flip-2_mt-off_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:05:56" + "Date": "2021-06-08 15:05:56", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-barcelona04/anat/sub-barcelona04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-barcelona04/anat/sub-barcelona04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-barcelona04/anat/sub-barcelona04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-barcelona04/anat/sub-barcelona04_space-other_T1w_label-SC_seg.json b/derivatives/labels/sub-barcelona04/anat/sub-barcelona04_space-other_T1w_label-SC_seg.json index 2e15d18b3d..fb1c4ad48e 100644 --- a/derivatives/labels/sub-barcelona04/anat/sub-barcelona04_space-other_T1w_label-SC_seg.json +++ b/derivatives/labels/sub-barcelona04/anat/sub-barcelona04_space-other_T1w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Etienne Bergeron", - "Date": "2021-06-11 14:37:19" + "Date": "2021-06-11 14:37:19", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-barcelona04/anat/sub-barcelona04_space-other_T2star_label-SC_seg.json b/derivatives/labels/sub-barcelona04/anat/sub-barcelona04_space-other_T2star_label-SC_seg.json index d1d9a41264..e4722521d9 100644 --- a/derivatives/labels/sub-barcelona04/anat/sub-barcelona04_space-other_T2star_label-SC_seg.json +++ b/derivatives/labels/sub-barcelona04/anat/sub-barcelona04_space-other_T2star_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Etienne Bergeron", - "Date": "2021-06-17 10:05:24" + "Date": "2021-06-17 10:05:24", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-barcelona04/anat/sub-barcelona04_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-barcelona04/anat/sub-barcelona04_space-other_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-barcelona04/anat/sub-barcelona04_space-other_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-barcelona04/anat/sub-barcelona04_space-other_T2w_label-SC_seg.json b/derivatives/labels/sub-barcelona04/anat/sub-barcelona04_space-other_T2w_label-SC_seg.json index 6e56128283..25df26e303 100644 --- a/derivatives/labels/sub-barcelona04/anat/sub-barcelona04_space-other_T2w_label-SC_seg.json +++ b/derivatives/labels/sub-barcelona04/anat/sub-barcelona04_space-other_T2w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:05:56" + "Date": "2021-06-08 15:05:56", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-barcelona04/dwi/sub-barcelona04_rec-average_dwi_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-barcelona04/dwi/sub-barcelona04_rec-average_dwi_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-barcelona04/dwi/sub-barcelona04_rec-average_dwi_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-barcelona05/anat/sub-barcelona05_flip-1_mt-on_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-barcelona05/anat/sub-barcelona05_flip-1_mt-on_space-other_MTS_label-SC_seg.json index 6e56128283..d20bab139b 100644 --- a/derivatives/labels/sub-barcelona05/anat/sub-barcelona05_flip-1_mt-on_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-barcelona05/anat/sub-barcelona05_flip-1_mt-on_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:05:56" + "Date": "2021-06-08 15:05:56", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-barcelona05/anat/sub-barcelona05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-barcelona05/anat/sub-barcelona05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-barcelona05/anat/sub-barcelona05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-barcelona05/anat/sub-barcelona05_flip-2_mt-off_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-barcelona05/anat/sub-barcelona05_flip-2_mt-off_space-other_MTS_label-SC_seg.json index 044f43fa6d..f8acdfb316 100644 --- a/derivatives/labels/sub-barcelona05/anat/sub-barcelona05_flip-2_mt-off_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-barcelona05/anat/sub-barcelona05_flip-2_mt-off_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Etienne Bergeron", - "Date": "2021-06-15 09:34:23" + "Date": "2021-06-15 09:34:23", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-barcelona05/anat/sub-barcelona05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-barcelona05/anat/sub-barcelona05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-barcelona05/anat/sub-barcelona05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-barcelona05/anat/sub-barcelona05_space-other_T1w_label-SC_seg.json b/derivatives/labels/sub-barcelona05/anat/sub-barcelona05_space-other_T1w_label-SC_seg.json index d4c51b404a..78dde61d35 100644 --- a/derivatives/labels/sub-barcelona05/anat/sub-barcelona05_space-other_T1w_label-SC_seg.json +++ b/derivatives/labels/sub-barcelona05/anat/sub-barcelona05_space-other_T1w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Etienne Bergeron", - "Date": "2021-06-12 16:08:21" + "Date": "2021-06-12 16:08:21", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-barcelona05/anat/sub-barcelona05_space-other_T2star_label-SC_seg.json b/derivatives/labels/sub-barcelona05/anat/sub-barcelona05_space-other_T2star_label-SC_seg.json index fdb22489b0..6450dc3f71 100644 --- a/derivatives/labels/sub-barcelona05/anat/sub-barcelona05_space-other_T2star_label-SC_seg.json +++ b/derivatives/labels/sub-barcelona05/anat/sub-barcelona05_space-other_T2star_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Etienne Bergeron", - "Date": "2021-06-17 10:15:18" + "Date": "2021-06-17 10:15:18", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-barcelona05/anat/sub-barcelona05_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-barcelona05/anat/sub-barcelona05_space-other_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-barcelona05/anat/sub-barcelona05_space-other_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-barcelona05/anat/sub-barcelona05_space-other_T2w_csflabel-SC_seg.json b/derivatives/labels/sub-barcelona05/anat/sub-barcelona05_space-other_T2w_csflabel-SC_seg.json index 5d72cb8aaa..2edede9801 100644 --- a/derivatives/labels/sub-barcelona05/anat/sub-barcelona05_space-other_T2w_csflabel-SC_seg.json +++ b/derivatives/labels/sub-barcelona05/anat/sub-barcelona05_space-other_T2w_csflabel-SC_seg.json @@ -1,3 +1,7 @@ { - "author": "Charley Gros" -} + "author": "Charley Gros", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/labels/sub-barcelona05/anat/sub-barcelona05_space-other_T2w_label-SC_seg.json b/derivatives/labels/sub-barcelona05/anat/sub-barcelona05_space-other_T2w_label-SC_seg.json index c26dc805a9..0ba576e0b9 100644 --- a/derivatives/labels/sub-barcelona05/anat/sub-barcelona05_space-other_T2w_label-SC_seg.json +++ b/derivatives/labels/sub-barcelona05/anat/sub-barcelona05_space-other_T2w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Etienne Bergeron", - "Date": "2021-06-14 14:22:42" + "Date": "2021-06-14 14:22:42", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-barcelona05/dwi/sub-barcelona05_rec-average_dwi_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-barcelona05/dwi/sub-barcelona05_rec-average_dwi_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-barcelona05/dwi/sub-barcelona05_rec-average_dwi_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-barcelona06/anat/sub-barcelona06_flip-1_mt-on_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-barcelona06/anat/sub-barcelona06_flip-1_mt-on_space-other_MTS_label-SC_seg.json index 6e56128283..d20bab139b 100644 --- a/derivatives/labels/sub-barcelona06/anat/sub-barcelona06_flip-1_mt-on_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-barcelona06/anat/sub-barcelona06_flip-1_mt-on_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:05:56" + "Date": "2021-06-08 15:05:56", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-barcelona06/anat/sub-barcelona06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-barcelona06/anat/sub-barcelona06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-barcelona06/anat/sub-barcelona06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-barcelona06/anat/sub-barcelona06_flip-2_mt-off_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-barcelona06/anat/sub-barcelona06_flip-2_mt-off_space-other_MTS_label-SC_seg.json index d5b3c656b3..1b0dfa6b8d 100644 --- a/derivatives/labels/sub-barcelona06/anat/sub-barcelona06_flip-2_mt-off_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-barcelona06/anat/sub-barcelona06_flip-2_mt-off_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-08-04 11:36:49" + "Date": "2021-08-04 11:36:49", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-barcelona06/anat/sub-barcelona06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-barcelona06/anat/sub-barcelona06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-barcelona06/anat/sub-barcelona06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-barcelona06/anat/sub-barcelona06_space-other_T1w_label-SC_seg.json b/derivatives/labels/sub-barcelona06/anat/sub-barcelona06_space-other_T1w_label-SC_seg.json index b1b62449a7..87cf745d4b 100644 --- a/derivatives/labels/sub-barcelona06/anat/sub-barcelona06_space-other_T1w_label-SC_seg.json +++ b/derivatives/labels/sub-barcelona06/anat/sub-barcelona06_space-other_T1w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Etienne Bergeron", - "Date": "2021-06-11 14:19:44" + "Date": "2021-06-11 14:19:44", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-barcelona06/anat/sub-barcelona06_space-other_T2star_label-SC_seg.json b/derivatives/labels/sub-barcelona06/anat/sub-barcelona06_space-other_T2star_label-SC_seg.json index b19117aae7..74cdac5c36 100644 --- a/derivatives/labels/sub-barcelona06/anat/sub-barcelona06_space-other_T2star_label-SC_seg.json +++ b/derivatives/labels/sub-barcelona06/anat/sub-barcelona06_space-other_T2star_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Etienne Bergeron", - "Date": "2021-06-17 10:23:31" + "Date": "2021-06-17 10:23:31", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-barcelona06/anat/sub-barcelona06_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-barcelona06/anat/sub-barcelona06_space-other_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-barcelona06/anat/sub-barcelona06_space-other_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-barcelona06/anat/sub-barcelona06_space-other_T2w_label-SC_seg.json b/derivatives/labels/sub-barcelona06/anat/sub-barcelona06_space-other_T2w_label-SC_seg.json index 6e56128283..25df26e303 100644 --- a/derivatives/labels/sub-barcelona06/anat/sub-barcelona06_space-other_T2w_label-SC_seg.json +++ b/derivatives/labels/sub-barcelona06/anat/sub-barcelona06_space-other_T2w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:05:56" + "Date": "2021-06-08 15:05:56", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-barcelona06/dwi/sub-barcelona06_rec-average_dwi_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-barcelona06/dwi/sub-barcelona06_rec-average_dwi_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-barcelona06/dwi/sub-barcelona06_rec-average_dwi_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-beijingGE01/anat/sub-beijingGE01_space-other_T1w_label-SC_seg.json b/derivatives/labels/sub-beijingGE01/anat/sub-beijingGE01_space-other_T1w_label-SC_seg.json index febff11d3f..77e68ede2d 100644 --- a/derivatives/labels/sub-beijingGE01/anat/sub-beijingGE01_space-other_T1w_label-SC_seg.json +++ b/derivatives/labels/sub-beijingGE01/anat/sub-beijingGE01_space-other_T1w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Etienne Bergeron", - "Date": "2021-06-12 20:29:43" + "Date": "2021-06-12 20:29:43", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-beijingGE01/anat/sub-beijingGE01_space-other_T2star_label-SC_seg.json b/derivatives/labels/sub-beijingGE01/anat/sub-beijingGE01_space-other_T2star_label-SC_seg.json index 2508eb5284..67809211cf 100644 --- a/derivatives/labels/sub-beijingGE01/anat/sub-beijingGE01_space-other_T2star_label-SC_seg.json +++ b/derivatives/labels/sub-beijingGE01/anat/sub-beijingGE01_space-other_T2star_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-08-17 20:29:43" -} + "Date": "2022-08-17 20:29:43", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } +} \ No newline at end of file diff --git a/derivatives/labels/sub-beijingGE01/anat/sub-beijingGE01_space-other_T2w_label-SC_seg.json b/derivatives/labels/sub-beijingGE01/anat/sub-beijingGE01_space-other_T2w_label-SC_seg.json index 2c1a5d76f4..59f157b0a7 100644 --- a/derivatives/labels/sub-beijingGE01/anat/sub-beijingGE01_space-other_T2w_label-SC_seg.json +++ b/derivatives/labels/sub-beijingGE01/anat/sub-beijingGE01_space-other_T2w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Etienne Bergeron", - "Date": "2021-06-14 09:47:22" + "Date": "2021-06-14 09:47:22", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-beijingGE02/anat/sub-beijingGE02_space-other_T1w_label-SC_seg.json b/derivatives/labels/sub-beijingGE02/anat/sub-beijingGE02_space-other_T1w_label-SC_seg.json index c4043ce6f6..55b5737411 100644 --- a/derivatives/labels/sub-beijingGE02/anat/sub-beijingGE02_space-other_T1w_label-SC_seg.json +++ b/derivatives/labels/sub-beijingGE02/anat/sub-beijingGE02_space-other_T1w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Etienne Bergeron", - "Date": "2021-06-14 09:35:04" + "Date": "2021-06-14 09:35:04", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-beijingGE02/anat/sub-beijingGE02_space-other_T2star_label-SC_seg.json b/derivatives/labels/sub-beijingGE02/anat/sub-beijingGE02_space-other_T2star_label-SC_seg.json index eb391d029f..e8bd2d50b8 100644 --- a/derivatives/labels/sub-beijingGE02/anat/sub-beijingGE02_space-other_T2star_label-SC_seg.json +++ b/derivatives/labels/sub-beijingGE02/anat/sub-beijingGE02_space-other_T2star_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-08-18 09:35:04" -} + "Date": "2022-08-18 09:35:04", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } +} \ No newline at end of file diff --git a/derivatives/labels/sub-beijingGE02/anat/sub-beijingGE02_space-other_T2w_label-SC_seg.json b/derivatives/labels/sub-beijingGE02/anat/sub-beijingGE02_space-other_T2w_label-SC_seg.json index 6e56128283..25df26e303 100644 --- a/derivatives/labels/sub-beijingGE02/anat/sub-beijingGE02_space-other_T2w_label-SC_seg.json +++ b/derivatives/labels/sub-beijingGE02/anat/sub-beijingGE02_space-other_T2w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:05:56" + "Date": "2021-06-08 15:05:56", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-beijingGE03/anat/sub-beijingGE03_space-other_T1w_label-SC_seg.json b/derivatives/labels/sub-beijingGE03/anat/sub-beijingGE03_space-other_T1w_label-SC_seg.json index 81477fcffe..a6623a195d 100644 --- a/derivatives/labels/sub-beijingGE03/anat/sub-beijingGE03_space-other_T1w_label-SC_seg.json +++ b/derivatives/labels/sub-beijingGE03/anat/sub-beijingGE03_space-other_T1w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Paul Bautin", - "Date": "2020-07-29 16:07:25" + "Date": "2020-07-29 16:07:25", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-beijingGE03/anat/sub-beijingGE03_space-other_T2star_label-SC_seg.json b/derivatives/labels/sub-beijingGE03/anat/sub-beijingGE03_space-other_T2star_label-SC_seg.json index 506ed242ad..1a8d1edafb 100644 --- a/derivatives/labels/sub-beijingGE03/anat/sub-beijingGE03_space-other_T2star_label-SC_seg.json +++ b/derivatives/labels/sub-beijingGE03/anat/sub-beijingGE03_space-other_T2star_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-08-17 09:16:51" -} + "Date": "2022-08-17 09:16:51", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } +} \ No newline at end of file diff --git a/derivatives/labels/sub-beijingGE03/anat/sub-beijingGE03_space-other_T2w_label-SC_seg.json b/derivatives/labels/sub-beijingGE03/anat/sub-beijingGE03_space-other_T2w_label-SC_seg.json index c93e5ba7ea..4b0c1dfec7 100644 --- a/derivatives/labels/sub-beijingGE03/anat/sub-beijingGE03_space-other_T2w_label-SC_seg.json +++ b/derivatives/labels/sub-beijingGE03/anat/sub-beijingGE03_space-other_T2w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Etienne Bergeron", - "Date": "2021-06-15 09:16:51" + "Date": "2021-06-15 09:16:51", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-beijingGE04/anat/sub-beijingGE04_space-other_T1w_label-SC_seg.json b/derivatives/labels/sub-beijingGE04/anat/sub-beijingGE04_space-other_T1w_label-SC_seg.json index 552b87d198..7b7a85addd 100644 --- a/derivatives/labels/sub-beijingGE04/anat/sub-beijingGE04_space-other_T1w_label-SC_seg.json +++ b/derivatives/labels/sub-beijingGE04/anat/sub-beijingGE04_space-other_T1w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-03 10:35:15" + "Date": "2021-06-03 10:35:15", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-beijingGE04/anat/sub-beijingGE04_space-other_T2w_label-SC_seg.json b/derivatives/labels/sub-beijingGE04/anat/sub-beijingGE04_space-other_T2w_label-SC_seg.json index e2233336ae..cda7809d6c 100644 --- a/derivatives/labels/sub-beijingGE04/anat/sub-beijingGE04_space-other_T2w_label-SC_seg.json +++ b/derivatives/labels/sub-beijingGE04/anat/sub-beijingGE04_space-other_T2w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Etienne Bergeron", - "Date": "2021-06-14 14:13:05" + "Date": "2021-06-14 14:13:05", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-beijingPrisma01/anat/sub-beijingPrisma01_flip-1_mt-on_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-beijingPrisma01/anat/sub-beijingPrisma01_flip-1_mt-on_space-other_MTS_label-SC_seg.json index 6e56128283..d20bab139b 100644 --- a/derivatives/labels/sub-beijingPrisma01/anat/sub-beijingPrisma01_flip-1_mt-on_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-beijingPrisma01/anat/sub-beijingPrisma01_flip-1_mt-on_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:05:56" + "Date": "2021-06-08 15:05:56", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-beijingPrisma01/anat/sub-beijingPrisma01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-beijingPrisma01/anat/sub-beijingPrisma01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-beijingPrisma01/anat/sub-beijingPrisma01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-beijingPrisma01/anat/sub-beijingPrisma01_flip-2_mt-off_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-beijingPrisma01/anat/sub-beijingPrisma01_flip-2_mt-off_space-other_MTS_label-SC_seg.json index df741f02f1..29ce574304 100644 --- a/derivatives/labels/sub-beijingPrisma01/anat/sub-beijingPrisma01_flip-2_mt-off_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-beijingPrisma01/anat/sub-beijingPrisma01_flip-2_mt-off_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-05 14:55:10" + "Date": "2022-10-05 14:55:10", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-beijingPrisma01/anat/sub-beijingPrisma01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-beijingPrisma01/anat/sub-beijingPrisma01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-beijingPrisma01/anat/sub-beijingPrisma01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-beijingPrisma01/anat/sub-beijingPrisma01_space-other_T1w_label-SC_seg.json b/derivatives/labels/sub-beijingPrisma01/anat/sub-beijingPrisma01_space-other_T1w_label-SC_seg.json index 9418917fb0..6cd49c616c 100644 --- a/derivatives/labels/sub-beijingPrisma01/anat/sub-beijingPrisma01_space-other_T1w_label-SC_seg.json +++ b/derivatives/labels/sub-beijingPrisma01/anat/sub-beijingPrisma01_space-other_T1w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Etienne Bergeron", - "Date": "2021-06-12 20:18:25" + "Date": "2021-06-12 20:18:25", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-beijingPrisma01/anat/sub-beijingPrisma01_space-other_T2star_label-SC_seg.json b/derivatives/labels/sub-beijingPrisma01/anat/sub-beijingPrisma01_space-other_T2star_label-SC_seg.json index 255b60a177..e5a1bed3d0 100644 --- a/derivatives/labels/sub-beijingPrisma01/anat/sub-beijingPrisma01_space-other_T2star_label-SC_seg.json +++ b/derivatives/labels/sub-beijingPrisma01/anat/sub-beijingPrisma01_space-other_T2star_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Etienne Bergeron", - "Date": "2021-06-17 19:07:38" + "Date": "2021-06-17 19:07:38", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-beijingPrisma01/anat/sub-beijingPrisma01_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-beijingPrisma01/anat/sub-beijingPrisma01_space-other_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-beijingPrisma01/anat/sub-beijingPrisma01_space-other_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-beijingPrisma01/anat/sub-beijingPrisma01_space-other_T2w_label-SC_seg.json b/derivatives/labels/sub-beijingPrisma01/anat/sub-beijingPrisma01_space-other_T2w_label-SC_seg.json index 6e56128283..25df26e303 100644 --- a/derivatives/labels/sub-beijingPrisma01/anat/sub-beijingPrisma01_space-other_T2w_label-SC_seg.json +++ b/derivatives/labels/sub-beijingPrisma01/anat/sub-beijingPrisma01_space-other_T2w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:05:56" + "Date": "2021-06-08 15:05:56", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-beijingPrisma01/dwi/sub-beijingPrisma01_rec-average_dwi_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-beijingPrisma01/dwi/sub-beijingPrisma01_rec-average_dwi_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-beijingPrisma01/dwi/sub-beijingPrisma01_rec-average_dwi_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-beijingPrisma02/anat/sub-beijingPrisma02_flip-1_mt-on_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-beijingPrisma02/anat/sub-beijingPrisma02_flip-1_mt-on_space-other_MTS_label-SC_seg.json index daee8a1430..90be04eef5 100644 --- a/derivatives/labels/sub-beijingPrisma02/anat/sub-beijingPrisma02_flip-1_mt-on_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-beijingPrisma02/anat/sub-beijingPrisma02_flip-1_mt-on_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Etienne Bergeron", - "Date": "2021-06-15 09:55:39" + "Date": "2021-06-15 09:55:39", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-beijingPrisma02/anat/sub-beijingPrisma02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-beijingPrisma02/anat/sub-beijingPrisma02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-beijingPrisma02/anat/sub-beijingPrisma02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-beijingPrisma02/anat/sub-beijingPrisma02_flip-2_mt-off_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-beijingPrisma02/anat/sub-beijingPrisma02_flip-2_mt-off_space-other_MTS_label-SC_seg.json index ecbda8510f..c5ca41424f 100644 --- a/derivatives/labels/sub-beijingPrisma02/anat/sub-beijingPrisma02_flip-2_mt-off_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-beijingPrisma02/anat/sub-beijingPrisma02_flip-2_mt-off_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Etienne Bergeron", - "Date": "2021-06-15 09:43:57" + "Date": "2021-06-15 09:43:57", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-beijingPrisma02/anat/sub-beijingPrisma02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-beijingPrisma02/anat/sub-beijingPrisma02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-beijingPrisma02/anat/sub-beijingPrisma02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-beijingPrisma02/anat/sub-beijingPrisma02_space-other_T1w_label-SC_seg.json b/derivatives/labels/sub-beijingPrisma02/anat/sub-beijingPrisma02_space-other_T1w_label-SC_seg.json index 06868c7793..38f6b664dc 100644 --- a/derivatives/labels/sub-beijingPrisma02/anat/sub-beijingPrisma02_space-other_T1w_label-SC_seg.json +++ b/derivatives/labels/sub-beijingPrisma02/anat/sub-beijingPrisma02_space-other_T1w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Etienne Bergeron", - "Date": "2021-06-12 15:51:54" + "Date": "2021-06-12 15:51:54", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-beijingPrisma02/anat/sub-beijingPrisma02_space-other_T2star_label-SC_seg.json b/derivatives/labels/sub-beijingPrisma02/anat/sub-beijingPrisma02_space-other_T2star_label-SC_seg.json index 6e56128283..c2befdc348 100644 --- a/derivatives/labels/sub-beijingPrisma02/anat/sub-beijingPrisma02_space-other_T2star_label-SC_seg.json +++ b/derivatives/labels/sub-beijingPrisma02/anat/sub-beijingPrisma02_space-other_T2star_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:05:56" + "Date": "2021-06-08 15:05:56", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-beijingPrisma02/anat/sub-beijingPrisma02_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-beijingPrisma02/anat/sub-beijingPrisma02_space-other_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-beijingPrisma02/anat/sub-beijingPrisma02_space-other_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-beijingPrisma02/anat/sub-beijingPrisma02_space-other_T2w_label-SC_seg.json b/derivatives/labels/sub-beijingPrisma02/anat/sub-beijingPrisma02_space-other_T2w_label-SC_seg.json index 6e56128283..25df26e303 100644 --- a/derivatives/labels/sub-beijingPrisma02/anat/sub-beijingPrisma02_space-other_T2w_label-SC_seg.json +++ b/derivatives/labels/sub-beijingPrisma02/anat/sub-beijingPrisma02_space-other_T2w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:05:56" + "Date": "2021-06-08 15:05:56", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-beijingPrisma02/dwi/sub-beijingPrisma02_rec-average_dwi_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-beijingPrisma02/dwi/sub-beijingPrisma02_rec-average_dwi_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-beijingPrisma02/dwi/sub-beijingPrisma02_rec-average_dwi_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-beijingPrisma03/anat/sub-beijingPrisma03_flip-1_mt-on_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-beijingPrisma03/anat/sub-beijingPrisma03_flip-1_mt-on_space-other_MTS_label-SC_seg.json index 6e56128283..d20bab139b 100644 --- a/derivatives/labels/sub-beijingPrisma03/anat/sub-beijingPrisma03_flip-1_mt-on_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-beijingPrisma03/anat/sub-beijingPrisma03_flip-1_mt-on_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:05:56" + "Date": "2021-06-08 15:05:56", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-beijingPrisma03/anat/sub-beijingPrisma03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-beijingPrisma03/anat/sub-beijingPrisma03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-beijingPrisma03/anat/sub-beijingPrisma03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-beijingPrisma03/anat/sub-beijingPrisma03_flip-2_mt-off_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-beijingPrisma03/anat/sub-beijingPrisma03_flip-2_mt-off_space-other_MTS_label-SC_seg.json index 0c8febec9d..32674f958f 100644 --- a/derivatives/labels/sub-beijingPrisma03/anat/sub-beijingPrisma03_flip-2_mt-off_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-beijingPrisma03/anat/sub-beijingPrisma03_flip-2_mt-off_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Etienne Bergeron", - "Date": "2021-06-15 09:18:10" + "Date": "2021-06-15 09:18:10", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-beijingPrisma03/anat/sub-beijingPrisma03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-beijingPrisma03/anat/sub-beijingPrisma03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-beijingPrisma03/anat/sub-beijingPrisma03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-beijingPrisma03/anat/sub-beijingPrisma03_space-other_T1w_label-SC_seg.json b/derivatives/labels/sub-beijingPrisma03/anat/sub-beijingPrisma03_space-other_T1w_label-SC_seg.json index 16c2506e6f..fe1bba90e2 100644 --- a/derivatives/labels/sub-beijingPrisma03/anat/sub-beijingPrisma03_space-other_T1w_label-SC_seg.json +++ b/derivatives/labels/sub-beijingPrisma03/anat/sub-beijingPrisma03_space-other_T1w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Yassine El Bouchaibi", - "Date": "2021-07-08 22:26:37" + "Date": "2021-07-08 22:26:37", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-beijingPrisma03/anat/sub-beijingPrisma03_space-other_T2star_label-SC_seg.json b/derivatives/labels/sub-beijingPrisma03/anat/sub-beijingPrisma03_space-other_T2star_label-SC_seg.json index 6e56128283..c2befdc348 100644 --- a/derivatives/labels/sub-beijingPrisma03/anat/sub-beijingPrisma03_space-other_T2star_label-SC_seg.json +++ b/derivatives/labels/sub-beijingPrisma03/anat/sub-beijingPrisma03_space-other_T2star_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:05:56" + "Date": "2021-06-08 15:05:56", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-beijingPrisma03/anat/sub-beijingPrisma03_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-beijingPrisma03/anat/sub-beijingPrisma03_space-other_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-beijingPrisma03/anat/sub-beijingPrisma03_space-other_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-beijingPrisma03/anat/sub-beijingPrisma03_space-other_T2w_label-SC_seg.json b/derivatives/labels/sub-beijingPrisma03/anat/sub-beijingPrisma03_space-other_T2w_label-SC_seg.json index 6e56128283..25df26e303 100644 --- a/derivatives/labels/sub-beijingPrisma03/anat/sub-beijingPrisma03_space-other_T2w_label-SC_seg.json +++ b/derivatives/labels/sub-beijingPrisma03/anat/sub-beijingPrisma03_space-other_T2w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:05:56" + "Date": "2021-06-08 15:05:56", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-beijingPrisma03/dwi/sub-beijingPrisma03_rec-average_dwi_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-beijingPrisma03/dwi/sub-beijingPrisma03_rec-average_dwi_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-beijingPrisma03/dwi/sub-beijingPrisma03_rec-average_dwi_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-beijingPrisma04/anat/sub-beijingPrisma04_flip-1_mt-on_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-beijingPrisma04/anat/sub-beijingPrisma04_flip-1_mt-on_space-other_MTS_label-SC_seg.json index 6e56128283..d20bab139b 100644 --- a/derivatives/labels/sub-beijingPrisma04/anat/sub-beijingPrisma04_flip-1_mt-on_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-beijingPrisma04/anat/sub-beijingPrisma04_flip-1_mt-on_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:05:56" + "Date": "2021-06-08 15:05:56", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-beijingPrisma04/anat/sub-beijingPrisma04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-beijingPrisma04/anat/sub-beijingPrisma04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-beijingPrisma04/anat/sub-beijingPrisma04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-beijingPrisma04/anat/sub-beijingPrisma04_flip-2_mt-off_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-beijingPrisma04/anat/sub-beijingPrisma04_flip-2_mt-off_space-other_MTS_label-SC_seg.json index 6e56128283..d20bab139b 100644 --- a/derivatives/labels/sub-beijingPrisma04/anat/sub-beijingPrisma04_flip-2_mt-off_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-beijingPrisma04/anat/sub-beijingPrisma04_flip-2_mt-off_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:05:56" + "Date": "2021-06-08 15:05:56", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-beijingPrisma04/anat/sub-beijingPrisma04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-beijingPrisma04/anat/sub-beijingPrisma04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-beijingPrisma04/anat/sub-beijingPrisma04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-beijingPrisma04/anat/sub-beijingPrisma04_space-other_T1w_label-SC_seg.json b/derivatives/labels/sub-beijingPrisma04/anat/sub-beijingPrisma04_space-other_T1w_label-SC_seg.json index ea41f16f09..895eb6bcb0 100644 --- a/derivatives/labels/sub-beijingPrisma04/anat/sub-beijingPrisma04_space-other_T1w_label-SC_seg.json +++ b/derivatives/labels/sub-beijingPrisma04/anat/sub-beijingPrisma04_space-other_T1w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Yassine El Bouchaibi", - "Date": "2021-07-08 22:08:19" + "Date": "2021-07-08 22:08:19", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-beijingPrisma04/anat/sub-beijingPrisma04_space-other_T2star_label-SC_seg.json b/derivatives/labels/sub-beijingPrisma04/anat/sub-beijingPrisma04_space-other_T2star_label-SC_seg.json index c2dbc2ea61..ded2092836 100644 --- a/derivatives/labels/sub-beijingPrisma04/anat/sub-beijingPrisma04_space-other_T2star_label-SC_seg.json +++ b/derivatives/labels/sub-beijingPrisma04/anat/sub-beijingPrisma04_space-other_T2star_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:05:57" + "Date": "2021-06-08 15:05:57", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-beijingPrisma04/anat/sub-beijingPrisma04_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-beijingPrisma04/anat/sub-beijingPrisma04_space-other_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-beijingPrisma04/anat/sub-beijingPrisma04_space-other_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-beijingPrisma04/anat/sub-beijingPrisma04_space-other_T2w_label-SC_seg.json b/derivatives/labels/sub-beijingPrisma04/anat/sub-beijingPrisma04_space-other_T2w_label-SC_seg.json index c2dbc2ea61..8ab5b17d85 100644 --- a/derivatives/labels/sub-beijingPrisma04/anat/sub-beijingPrisma04_space-other_T2w_label-SC_seg.json +++ b/derivatives/labels/sub-beijingPrisma04/anat/sub-beijingPrisma04_space-other_T2w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:05:57" + "Date": "2021-06-08 15:05:57", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-beijingPrisma04/dwi/sub-beijingPrisma04_rec-average_dwi_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-beijingPrisma04/dwi/sub-beijingPrisma04_rec-average_dwi_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-beijingPrisma04/dwi/sub-beijingPrisma04_rec-average_dwi_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-beijingPrisma05/anat/sub-beijingPrisma05_flip-1_mt-on_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-beijingPrisma05/anat/sub-beijingPrisma05_flip-1_mt-on_space-other_MTS_label-SC_seg.json index c2dbc2ea61..41ccdde936 100644 --- a/derivatives/labels/sub-beijingPrisma05/anat/sub-beijingPrisma05_flip-1_mt-on_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-beijingPrisma05/anat/sub-beijingPrisma05_flip-1_mt-on_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:05:57" + "Date": "2021-06-08 15:05:57", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-beijingPrisma05/anat/sub-beijingPrisma05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-beijingPrisma05/anat/sub-beijingPrisma05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-beijingPrisma05/anat/sub-beijingPrisma05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-beijingPrisma05/anat/sub-beijingPrisma05_flip-2_mt-off_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-beijingPrisma05/anat/sub-beijingPrisma05_flip-2_mt-off_space-other_MTS_label-SC_seg.json index c2dbc2ea61..41ccdde936 100644 --- a/derivatives/labels/sub-beijingPrisma05/anat/sub-beijingPrisma05_flip-2_mt-off_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-beijingPrisma05/anat/sub-beijingPrisma05_flip-2_mt-off_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:05:57" + "Date": "2021-06-08 15:05:57", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-beijingPrisma05/anat/sub-beijingPrisma05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-beijingPrisma05/anat/sub-beijingPrisma05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-beijingPrisma05/anat/sub-beijingPrisma05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-beijingPrisma05/anat/sub-beijingPrisma05_space-other_T1w_label-SC_seg.json b/derivatives/labels/sub-beijingPrisma05/anat/sub-beijingPrisma05_space-other_T1w_label-SC_seg.json index 3e09252378..cdadd08a80 100644 --- a/derivatives/labels/sub-beijingPrisma05/anat/sub-beijingPrisma05_space-other_T1w_label-SC_seg.json +++ b/derivatives/labels/sub-beijingPrisma05/anat/sub-beijingPrisma05_space-other_T1w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Etienne Bergeron", - "Date": "2021-06-12 15:59:34" + "Date": "2021-06-12 15:59:34", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-beijingPrisma05/anat/sub-beijingPrisma05_space-other_T2star_label-SC_seg.json b/derivatives/labels/sub-beijingPrisma05/anat/sub-beijingPrisma05_space-other_T2star_label-SC_seg.json index c2dbc2ea61..ded2092836 100644 --- a/derivatives/labels/sub-beijingPrisma05/anat/sub-beijingPrisma05_space-other_T2star_label-SC_seg.json +++ b/derivatives/labels/sub-beijingPrisma05/anat/sub-beijingPrisma05_space-other_T2star_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:05:57" + "Date": "2021-06-08 15:05:57", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-beijingPrisma05/anat/sub-beijingPrisma05_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-beijingPrisma05/anat/sub-beijingPrisma05_space-other_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-beijingPrisma05/anat/sub-beijingPrisma05_space-other_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-beijingPrisma05/anat/sub-beijingPrisma05_space-other_T2w_label-SC_seg.json b/derivatives/labels/sub-beijingPrisma05/anat/sub-beijingPrisma05_space-other_T2w_label-SC_seg.json index a2206f59b4..f7a2adc5a3 100644 --- a/derivatives/labels/sub-beijingPrisma05/anat/sub-beijingPrisma05_space-other_T2w_label-SC_seg.json +++ b/derivatives/labels/sub-beijingPrisma05/anat/sub-beijingPrisma05_space-other_T2w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Etienne Bergeron", - "Date": "2021-06-14 14:34:40" + "Date": "2021-06-14 14:34:40", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-beijingPrisma05/dwi/sub-beijingPrisma05_rec-average_dwi_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-beijingPrisma05/dwi/sub-beijingPrisma05_rec-average_dwi_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-beijingPrisma05/dwi/sub-beijingPrisma05_rec-average_dwi_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-beijingVerio01/anat/sub-beijingVerio01_space-other_T1w_label-SC_seg.json b/derivatives/labels/sub-beijingVerio01/anat/sub-beijingVerio01_space-other_T1w_label-SC_seg.json index a6f8b9f5e2..e086799557 100644 --- a/derivatives/labels/sub-beijingVerio01/anat/sub-beijingVerio01_space-other_T1w_label-SC_seg.json +++ b/derivatives/labels/sub-beijingVerio01/anat/sub-beijingVerio01_space-other_T1w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Etienne Bergeron", - "Date": "2021-06-14 09:16:04" + "Date": "2021-06-14 09:16:04", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-beijingVerio01/anat/sub-beijingVerio01_space-other_T2star_label-SC_seg.json b/derivatives/labels/sub-beijingVerio01/anat/sub-beijingVerio01_space-other_T2star_label-SC_seg.json index a78878eea2..79e77f4f47 100644 --- a/derivatives/labels/sub-beijingVerio01/anat/sub-beijingVerio01_space-other_T2star_label-SC_seg.json +++ b/derivatives/labels/sub-beijingVerio01/anat/sub-beijingVerio01_space-other_T2star_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-08-17 09:16:04" -} + "Date": "2022-08-17 09:16:04", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } +} \ No newline at end of file diff --git a/derivatives/labels/sub-beijingVerio01/anat/sub-beijingVerio01_space-other_T2w_label-SC_seg.json b/derivatives/labels/sub-beijingVerio01/anat/sub-beijingVerio01_space-other_T2w_label-SC_seg.json index 92be01a744..eea2fcf48a 100644 --- a/derivatives/labels/sub-beijingVerio01/anat/sub-beijingVerio01_space-other_T2w_label-SC_seg.json +++ b/derivatives/labels/sub-beijingVerio01/anat/sub-beijingVerio01_space-other_T2w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Etienne Bergeron", - "Date": "2021-06-14 14:30:30" + "Date": "2021-06-14 14:30:30", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-beijingVerio02/anat/sub-beijingVerio02_space-other_T1w_label-SC_seg.json b/derivatives/labels/sub-beijingVerio02/anat/sub-beijingVerio02_space-other_T1w_label-SC_seg.json index a0f7e1e678..50958d1c1d 100644 --- a/derivatives/labels/sub-beijingVerio02/anat/sub-beijingVerio02_space-other_T1w_label-SC_seg.json +++ b/derivatives/labels/sub-beijingVerio02/anat/sub-beijingVerio02_space-other_T1w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Etienne Bergeron", - "Date": "2021-06-12 20:08:48" + "Date": "2021-06-12 20:08:48", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-beijingVerio02/anat/sub-beijingVerio02_space-other_T2star_label-SC_seg.json b/derivatives/labels/sub-beijingVerio02/anat/sub-beijingVerio02_space-other_T2star_label-SC_seg.json index a0f7e1e678..c72f5beb73 100644 --- a/derivatives/labels/sub-beijingVerio02/anat/sub-beijingVerio02_space-other_T2star_label-SC_seg.json +++ b/derivatives/labels/sub-beijingVerio02/anat/sub-beijingVerio02_space-other_T2star_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Etienne Bergeron", - "Date": "2021-06-12 20:08:48" + "Date": "2021-06-12 20:08:48", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-beijingVerio02/anat/sub-beijingVerio02_space-other_T2w_label-SC_seg.json b/derivatives/labels/sub-beijingVerio02/anat/sub-beijingVerio02_space-other_T2w_label-SC_seg.json index 6e2bd03e2f..1bcc95d82d 100644 --- a/derivatives/labels/sub-beijingVerio02/anat/sub-beijingVerio02_space-other_T2w_label-SC_seg.json +++ b/derivatives/labels/sub-beijingVerio02/anat/sub-beijingVerio02_space-other_T2w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-03 10:35:19" + "Date": "2021-06-03 10:35:19", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-beijingVerio03/anat/sub-beijingVerio03_space-other_T1w_label-SC_seg.json b/derivatives/labels/sub-beijingVerio03/anat/sub-beijingVerio03_space-other_T1w_label-SC_seg.json index c1d7806ae9..d8eaf718b6 100644 --- a/derivatives/labels/sub-beijingVerio03/anat/sub-beijingVerio03_space-other_T1w_label-SC_seg.json +++ b/derivatives/labels/sub-beijingVerio03/anat/sub-beijingVerio03_space-other_T1w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Etienne Bergeron", - "Date": "2021-06-12 16:15:39" + "Date": "2021-06-12 16:15:39", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-beijingVerio03/anat/sub-beijingVerio03_space-other_T2star_label-SC_seg.json b/derivatives/labels/sub-beijingVerio03/anat/sub-beijingVerio03_space-other_T2star_label-SC_seg.json index 651da7b3a4..4eabcb9160 100644 --- a/derivatives/labels/sub-beijingVerio03/anat/sub-beijingVerio03_space-other_T2star_label-SC_seg.json +++ b/derivatives/labels/sub-beijingVerio03/anat/sub-beijingVerio03_space-other_T2star_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Etienne Bergeron", - "Date": "2021-06-14 13:56:00" + "Date": "2021-06-14 13:56:00", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-beijingVerio03/anat/sub-beijingVerio03_space-other_T2w_label-SC_seg.json b/derivatives/labels/sub-beijingVerio03/anat/sub-beijingVerio03_space-other_T2w_label-SC_seg.json index 651da7b3a4..f1fc3ccbac 100644 --- a/derivatives/labels/sub-beijingVerio03/anat/sub-beijingVerio03_space-other_T2w_label-SC_seg.json +++ b/derivatives/labels/sub-beijingVerio03/anat/sub-beijingVerio03_space-other_T2w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Etienne Bergeron", - "Date": "2021-06-14 13:56:00" + "Date": "2021-06-14 13:56:00", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-beijingVerio04/anat/sub-beijingVerio04_space-other_T1w_label-SC_seg.json b/derivatives/labels/sub-beijingVerio04/anat/sub-beijingVerio04_space-other_T1w_label-SC_seg.json index 63e262d8e1..cfdd888b5c 100644 --- a/derivatives/labels/sub-beijingVerio04/anat/sub-beijingVerio04_space-other_T1w_label-SC_seg.json +++ b/derivatives/labels/sub-beijingVerio04/anat/sub-beijingVerio04_space-other_T1w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-07-17 14:33:25" -} + "Date": "2021-07-17 14:33:25", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/labels/sub-beijingVerio04/anat/sub-beijingVerio04_space-other_T2star_label-SC_seg.json b/derivatives/labels/sub-beijingVerio04/anat/sub-beijingVerio04_space-other_T2star_label-SC_seg.json index 63e262d8e1..7aa3a96456 100644 --- a/derivatives/labels/sub-beijingVerio04/anat/sub-beijingVerio04_space-other_T2star_label-SC_seg.json +++ b/derivatives/labels/sub-beijingVerio04/anat/sub-beijingVerio04_space-other_T2star_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-07-17 14:33:25" -} + "Date": "2021-07-17 14:33:25", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } +} \ No newline at end of file diff --git a/derivatives/labels/sub-beijingVerio04/anat/sub-beijingVerio04_space-other_T2w_label-SC_seg.json b/derivatives/labels/sub-beijingVerio04/anat/sub-beijingVerio04_space-other_T2w_label-SC_seg.json index 8a05c1aa59..566848c659 100644 --- a/derivatives/labels/sub-beijingVerio04/anat/sub-beijingVerio04_space-other_T2w_label-SC_seg.json +++ b/derivatives/labels/sub-beijingVerio04/anat/sub-beijingVerio04_space-other_T2w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-07-07 14:33:32" -} + "Date": "2022-07-07 14:33:32", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/labels/sub-brnoCeitec01/anat/sub-brnoCeitec01_flip-1_mt-on_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-brnoCeitec01/anat/sub-brnoCeitec01_flip-1_mt-on_space-other_MTS_label-SC_seg.json index c2dbc2ea61..41ccdde936 100644 --- a/derivatives/labels/sub-brnoCeitec01/anat/sub-brnoCeitec01_flip-1_mt-on_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-brnoCeitec01/anat/sub-brnoCeitec01_flip-1_mt-on_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:05:57" + "Date": "2021-06-08 15:05:57", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-brnoCeitec01/anat/sub-brnoCeitec01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-brnoCeitec01/anat/sub-brnoCeitec01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-brnoCeitec01/anat/sub-brnoCeitec01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-brnoCeitec01/anat/sub-brnoCeitec01_flip-2_mt-off_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-brnoCeitec01/anat/sub-brnoCeitec01_flip-2_mt-off_space-other_MTS_label-SC_seg.json index c2dbc2ea61..41ccdde936 100644 --- a/derivatives/labels/sub-brnoCeitec01/anat/sub-brnoCeitec01_flip-2_mt-off_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-brnoCeitec01/anat/sub-brnoCeitec01_flip-2_mt-off_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:05:57" + "Date": "2021-06-08 15:05:57", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-brnoCeitec01/anat/sub-brnoCeitec01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-brnoCeitec01/anat/sub-brnoCeitec01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-brnoCeitec01/anat/sub-brnoCeitec01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-brnoCeitec01/anat/sub-brnoCeitec01_space-other_T1w_label-SC_seg.json b/derivatives/labels/sub-brnoCeitec01/anat/sub-brnoCeitec01_space-other_T1w_label-SC_seg.json index 1efc6623ca..c4552c30a3 100644 --- a/derivatives/labels/sub-brnoCeitec01/anat/sub-brnoCeitec01_space-other_T1w_label-SC_seg.json +++ b/derivatives/labels/sub-brnoCeitec01/anat/sub-brnoCeitec01_space-other_T1w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Etienne Bergeron", - "Date": "2021-06-17 19:16:31" + "Date": "2021-06-17 19:16:31", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-brnoCeitec01/anat/sub-brnoCeitec01_space-other_T2star_label-SC_seg.json b/derivatives/labels/sub-brnoCeitec01/anat/sub-brnoCeitec01_space-other_T2star_label-SC_seg.json index c2dbc2ea61..ded2092836 100644 --- a/derivatives/labels/sub-brnoCeitec01/anat/sub-brnoCeitec01_space-other_T2star_label-SC_seg.json +++ b/derivatives/labels/sub-brnoCeitec01/anat/sub-brnoCeitec01_space-other_T2star_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:05:57" + "Date": "2021-06-08 15:05:57", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-brnoCeitec01/anat/sub-brnoCeitec01_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-brnoCeitec01/anat/sub-brnoCeitec01_space-other_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-brnoCeitec01/anat/sub-brnoCeitec01_space-other_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-brnoCeitec01/anat/sub-brnoCeitec01_space-other_T2w_label-SC_seg.json b/derivatives/labels/sub-brnoCeitec01/anat/sub-brnoCeitec01_space-other_T2w_label-SC_seg.json index c2dbc2ea61..8ab5b17d85 100644 --- a/derivatives/labels/sub-brnoCeitec01/anat/sub-brnoCeitec01_space-other_T2w_label-SC_seg.json +++ b/derivatives/labels/sub-brnoCeitec01/anat/sub-brnoCeitec01_space-other_T2w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:05:57" + "Date": "2021-06-08 15:05:57", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-brnoCeitec01/dwi/sub-brnoCeitec01_rec-average_dwi_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-brnoCeitec01/dwi/sub-brnoCeitec01_rec-average_dwi_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-brnoCeitec01/dwi/sub-brnoCeitec01_rec-average_dwi_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-brnoCeitec02/anat/sub-brnoCeitec02_flip-1_mt-on_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-brnoCeitec02/anat/sub-brnoCeitec02_flip-1_mt-on_space-other_MTS_label-SC_seg.json index f99a8e3df8..fb35cd831c 100644 --- a/derivatives/labels/sub-brnoCeitec02/anat/sub-brnoCeitec02_flip-1_mt-on_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-brnoCeitec02/anat/sub-brnoCeitec02_flip-1_mt-on_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-08-04 12:03:46" + "Date": "2021-08-04 12:03:46", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-brnoCeitec02/anat/sub-brnoCeitec02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-brnoCeitec02/anat/sub-brnoCeitec02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-brnoCeitec02/anat/sub-brnoCeitec02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-brnoCeitec02/anat/sub-brnoCeitec02_flip-2_mt-off_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-brnoCeitec02/anat/sub-brnoCeitec02_flip-2_mt-off_space-other_MTS_label-SC_seg.json index c2dbc2ea61..41ccdde936 100644 --- a/derivatives/labels/sub-brnoCeitec02/anat/sub-brnoCeitec02_flip-2_mt-off_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-brnoCeitec02/anat/sub-brnoCeitec02_flip-2_mt-off_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:05:57" + "Date": "2021-06-08 15:05:57", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-brnoCeitec02/anat/sub-brnoCeitec02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-brnoCeitec02/anat/sub-brnoCeitec02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-brnoCeitec02/anat/sub-brnoCeitec02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-brnoCeitec02/anat/sub-brnoCeitec02_space-other_T1w_label-SC_seg.json b/derivatives/labels/sub-brnoCeitec02/anat/sub-brnoCeitec02_space-other_T1w_label-SC_seg.json index 67c2993697..09098707c3 100644 --- a/derivatives/labels/sub-brnoCeitec02/anat/sub-brnoCeitec02_space-other_T1w_label-SC_seg.json +++ b/derivatives/labels/sub-brnoCeitec02/anat/sub-brnoCeitec02_space-other_T1w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Etienne Bergeron", - "Date": "2021-06-17 19:21:25" + "Date": "2021-06-17 19:21:25", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-brnoCeitec02/anat/sub-brnoCeitec02_space-other_T2star_label-SC_seg.json b/derivatives/labels/sub-brnoCeitec02/anat/sub-brnoCeitec02_space-other_T2star_label-SC_seg.json index c2dbc2ea61..ded2092836 100644 --- a/derivatives/labels/sub-brnoCeitec02/anat/sub-brnoCeitec02_space-other_T2star_label-SC_seg.json +++ b/derivatives/labels/sub-brnoCeitec02/anat/sub-brnoCeitec02_space-other_T2star_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:05:57" + "Date": "2021-06-08 15:05:57", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-brnoCeitec02/anat/sub-brnoCeitec02_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-brnoCeitec02/anat/sub-brnoCeitec02_space-other_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-brnoCeitec02/anat/sub-brnoCeitec02_space-other_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-brnoCeitec02/anat/sub-brnoCeitec02_space-other_T2w_label-SC_seg.json b/derivatives/labels/sub-brnoCeitec02/anat/sub-brnoCeitec02_space-other_T2w_label-SC_seg.json index 65a8fbe9c0..ade817cd0a 100644 --- a/derivatives/labels/sub-brnoCeitec02/anat/sub-brnoCeitec02_space-other_T2w_label-SC_seg.json +++ b/derivatives/labels/sub-brnoCeitec02/anat/sub-brnoCeitec02_space-other_T2w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Etienne Bergeron", - "Date": "2021-06-21 13:48:15" + "Date": "2021-06-21 13:48:15", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-brnoCeitec02/dwi/sub-brnoCeitec02_rec-average_dwi_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-brnoCeitec02/dwi/sub-brnoCeitec02_rec-average_dwi_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-brnoCeitec02/dwi/sub-brnoCeitec02_rec-average_dwi_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-brnoCeitec03/anat/sub-brnoCeitec03_flip-1_mt-on_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-brnoCeitec03/anat/sub-brnoCeitec03_flip-1_mt-on_space-other_MTS_label-SC_seg.json index c2dbc2ea61..41ccdde936 100644 --- a/derivatives/labels/sub-brnoCeitec03/anat/sub-brnoCeitec03_flip-1_mt-on_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-brnoCeitec03/anat/sub-brnoCeitec03_flip-1_mt-on_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:05:57" + "Date": "2021-06-08 15:05:57", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-brnoCeitec03/anat/sub-brnoCeitec03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-brnoCeitec03/anat/sub-brnoCeitec03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-brnoCeitec03/anat/sub-brnoCeitec03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-brnoCeitec03/anat/sub-brnoCeitec03_flip-2_mt-off_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-brnoCeitec03/anat/sub-brnoCeitec03_flip-2_mt-off_space-other_MTS_label-SC_seg.json index c2dbc2ea61..41ccdde936 100644 --- a/derivatives/labels/sub-brnoCeitec03/anat/sub-brnoCeitec03_flip-2_mt-off_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-brnoCeitec03/anat/sub-brnoCeitec03_flip-2_mt-off_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:05:57" + "Date": "2021-06-08 15:05:57", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-brnoCeitec03/anat/sub-brnoCeitec03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-brnoCeitec03/anat/sub-brnoCeitec03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-brnoCeitec03/anat/sub-brnoCeitec03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-brnoCeitec03/anat/sub-brnoCeitec03_space-other_T1w_label-SC_seg.json b/derivatives/labels/sub-brnoCeitec03/anat/sub-brnoCeitec03_space-other_T1w_label-SC_seg.json index bd66c8334e..cf9f25f502 100644 --- a/derivatives/labels/sub-brnoCeitec03/anat/sub-brnoCeitec03_space-other_T1w_label-SC_seg.json +++ b/derivatives/labels/sub-brnoCeitec03/anat/sub-brnoCeitec03_space-other_T1w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Etienne Bergeron", - "Date": "2021-06-17 19:28:04" + "Date": "2021-06-17 19:28:04", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-brnoCeitec03/anat/sub-brnoCeitec03_space-other_T2star_label-SC_seg.json b/derivatives/labels/sub-brnoCeitec03/anat/sub-brnoCeitec03_space-other_T2star_label-SC_seg.json index c2dbc2ea61..ded2092836 100644 --- a/derivatives/labels/sub-brnoCeitec03/anat/sub-brnoCeitec03_space-other_T2star_label-SC_seg.json +++ b/derivatives/labels/sub-brnoCeitec03/anat/sub-brnoCeitec03_space-other_T2star_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:05:57" + "Date": "2021-06-08 15:05:57", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-brnoCeitec03/anat/sub-brnoCeitec03_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-brnoCeitec03/anat/sub-brnoCeitec03_space-other_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-brnoCeitec03/anat/sub-brnoCeitec03_space-other_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-brnoCeitec03/anat/sub-brnoCeitec03_space-other_T2w_label-SC_seg.json b/derivatives/labels/sub-brnoCeitec03/anat/sub-brnoCeitec03_space-other_T2w_label-SC_seg.json index c2dbc2ea61..8ab5b17d85 100644 --- a/derivatives/labels/sub-brnoCeitec03/anat/sub-brnoCeitec03_space-other_T2w_label-SC_seg.json +++ b/derivatives/labels/sub-brnoCeitec03/anat/sub-brnoCeitec03_space-other_T2w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:05:57" + "Date": "2021-06-08 15:05:57", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-brnoCeitec03/dwi/sub-brnoCeitec03_rec-average_dwi_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-brnoCeitec03/dwi/sub-brnoCeitec03_rec-average_dwi_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-brnoCeitec03/dwi/sub-brnoCeitec03_rec-average_dwi_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-brnoCeitec04/anat/sub-brnoCeitec04_flip-1_mt-on_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-brnoCeitec04/anat/sub-brnoCeitec04_flip-1_mt-on_space-other_MTS_label-SC_seg.json index c2dbc2ea61..41ccdde936 100644 --- a/derivatives/labels/sub-brnoCeitec04/anat/sub-brnoCeitec04_flip-1_mt-on_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-brnoCeitec04/anat/sub-brnoCeitec04_flip-1_mt-on_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:05:57" + "Date": "2021-06-08 15:05:57", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-brnoCeitec04/anat/sub-brnoCeitec04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-brnoCeitec04/anat/sub-brnoCeitec04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-brnoCeitec04/anat/sub-brnoCeitec04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-brnoCeitec04/anat/sub-brnoCeitec04_flip-2_mt-off_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-brnoCeitec04/anat/sub-brnoCeitec04_flip-2_mt-off_space-other_MTS_label-SC_seg.json index dc141d404d..fd2b7bc842 100644 --- a/derivatives/labels/sub-brnoCeitec04/anat/sub-brnoCeitec04_flip-2_mt-off_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-brnoCeitec04/anat/sub-brnoCeitec04_flip-2_mt-off_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Etienne Bergeron", - "Date": "2021-06-21 14:33:56" + "Date": "2021-06-21 14:33:56", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-brnoCeitec04/anat/sub-brnoCeitec04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-brnoCeitec04/anat/sub-brnoCeitec04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-brnoCeitec04/anat/sub-brnoCeitec04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-brnoCeitec04/anat/sub-brnoCeitec04_space-other_T1w_label-SC_seg.json b/derivatives/labels/sub-brnoCeitec04/anat/sub-brnoCeitec04_space-other_T1w_label-SC_seg.json index c16d71d098..a873311f32 100644 --- a/derivatives/labels/sub-brnoCeitec04/anat/sub-brnoCeitec04_space-other_T1w_label-SC_seg.json +++ b/derivatives/labels/sub-brnoCeitec04/anat/sub-brnoCeitec04_space-other_T1w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Etienne Bergeron", - "Date": "2021-06-17 19:30:24" + "Date": "2021-06-17 19:30:24", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-brnoCeitec04/anat/sub-brnoCeitec04_space-other_T2star_label-SC_seg.json b/derivatives/labels/sub-brnoCeitec04/anat/sub-brnoCeitec04_space-other_T2star_label-SC_seg.json index c2dbc2ea61..ded2092836 100644 --- a/derivatives/labels/sub-brnoCeitec04/anat/sub-brnoCeitec04_space-other_T2star_label-SC_seg.json +++ b/derivatives/labels/sub-brnoCeitec04/anat/sub-brnoCeitec04_space-other_T2star_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:05:57" + "Date": "2021-06-08 15:05:57", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-brnoCeitec04/anat/sub-brnoCeitec04_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-brnoCeitec04/anat/sub-brnoCeitec04_space-other_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-brnoCeitec04/anat/sub-brnoCeitec04_space-other_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-brnoCeitec04/anat/sub-brnoCeitec04_space-other_T2w_label-SC_seg.json b/derivatives/labels/sub-brnoCeitec04/anat/sub-brnoCeitec04_space-other_T2w_label-SC_seg.json index 1c8e651710..894b949b94 100644 --- a/derivatives/labels/sub-brnoCeitec04/anat/sub-brnoCeitec04_space-other_T2w_label-SC_seg.json +++ b/derivatives/labels/sub-brnoCeitec04/anat/sub-brnoCeitec04_space-other_T2w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:05:58" + "Date": "2021-06-08 15:05:58", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-brnoCeitec04/dwi/sub-brnoCeitec04_rec-average_dwi_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-brnoCeitec04/dwi/sub-brnoCeitec04_rec-average_dwi_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-brnoCeitec04/dwi/sub-brnoCeitec04_rec-average_dwi_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-brnoCeitec05/anat/sub-brnoCeitec05_flip-1_mt-on_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-brnoCeitec05/anat/sub-brnoCeitec05_flip-1_mt-on_space-other_MTS_label-SC_seg.json index e185b302e8..c020e72eea 100644 --- a/derivatives/labels/sub-brnoCeitec05/anat/sub-brnoCeitec05_flip-1_mt-on_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-brnoCeitec05/anat/sub-brnoCeitec05_flip-1_mt-on_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Etienne Bergeron", - "Date": "2021-06-23 10:31:10" + "Date": "2021-06-23 10:31:10", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-brnoCeitec05/anat/sub-brnoCeitec05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-brnoCeitec05/anat/sub-brnoCeitec05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-brnoCeitec05/anat/sub-brnoCeitec05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-brnoCeitec05/anat/sub-brnoCeitec05_flip-2_mt-off_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-brnoCeitec05/anat/sub-brnoCeitec05_flip-2_mt-off_space-other_MTS_label-SC_seg.json index 6cb284a986..37fc56c777 100644 --- a/derivatives/labels/sub-brnoCeitec05/anat/sub-brnoCeitec05_flip-2_mt-off_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-brnoCeitec05/anat/sub-brnoCeitec05_flip-2_mt-off_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Etienne Bergeron", - "Date": "2021-06-23 09:55:00" + "Date": "2021-06-23 09:55:00", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-brnoCeitec05/anat/sub-brnoCeitec05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-brnoCeitec05/anat/sub-brnoCeitec05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-brnoCeitec05/anat/sub-brnoCeitec05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-brnoCeitec05/anat/sub-brnoCeitec05_space-other_T1w_label-SC_seg.json b/derivatives/labels/sub-brnoCeitec05/anat/sub-brnoCeitec05_space-other_T1w_label-SC_seg.json index 95ec7b9b4c..ea01927927 100644 --- a/derivatives/labels/sub-brnoCeitec05/anat/sub-brnoCeitec05_space-other_T1w_label-SC_seg.json +++ b/derivatives/labels/sub-brnoCeitec05/anat/sub-brnoCeitec05_space-other_T1w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Etienne Bergeron", - "Date": "2021-06-17 19:33:21" + "Date": "2021-06-17 19:33:21", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-brnoCeitec05/anat/sub-brnoCeitec05_space-other_T2star_label-SC_seg.json b/derivatives/labels/sub-brnoCeitec05/anat/sub-brnoCeitec05_space-other_T2star_label-SC_seg.json index 1c8e651710..22005499ce 100644 --- a/derivatives/labels/sub-brnoCeitec05/anat/sub-brnoCeitec05_space-other_T2star_label-SC_seg.json +++ b/derivatives/labels/sub-brnoCeitec05/anat/sub-brnoCeitec05_space-other_T2star_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:05:58" + "Date": "2021-06-08 15:05:58", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-brnoCeitec05/anat/sub-brnoCeitec05_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-brnoCeitec05/anat/sub-brnoCeitec05_space-other_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-brnoCeitec05/anat/sub-brnoCeitec05_space-other_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-brnoCeitec05/anat/sub-brnoCeitec05_space-other_T2w_label-SC_seg.json b/derivatives/labels/sub-brnoCeitec05/anat/sub-brnoCeitec05_space-other_T2w_label-SC_seg.json index 1c8e651710..894b949b94 100644 --- a/derivatives/labels/sub-brnoCeitec05/anat/sub-brnoCeitec05_space-other_T2w_label-SC_seg.json +++ b/derivatives/labels/sub-brnoCeitec05/anat/sub-brnoCeitec05_space-other_T2w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:05:58" + "Date": "2021-06-08 15:05:58", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-brnoCeitec05/dwi/sub-brnoCeitec05_rec-average_dwi_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-brnoCeitec05/dwi/sub-brnoCeitec05_rec-average_dwi_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-brnoCeitec05/dwi/sub-brnoCeitec05_rec-average_dwi_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-brnoCeitec06/anat/sub-brnoCeitec06_flip-1_mt-on_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-brnoCeitec06/anat/sub-brnoCeitec06_flip-1_mt-on_space-other_MTS_label-SC_seg.json index 1c8e651710..686ad35f1a 100644 --- a/derivatives/labels/sub-brnoCeitec06/anat/sub-brnoCeitec06_flip-1_mt-on_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-brnoCeitec06/anat/sub-brnoCeitec06_flip-1_mt-on_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:05:58" + "Date": "2021-06-08 15:05:58", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-brnoCeitec06/anat/sub-brnoCeitec06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-brnoCeitec06/anat/sub-brnoCeitec06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-brnoCeitec06/anat/sub-brnoCeitec06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-brnoCeitec06/anat/sub-brnoCeitec06_flip-2_mt-off_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-brnoCeitec06/anat/sub-brnoCeitec06_flip-2_mt-off_space-other_MTS_label-SC_seg.json index df623bfb66..8073fc2ba3 100644 --- a/derivatives/labels/sub-brnoCeitec06/anat/sub-brnoCeitec06_flip-2_mt-off_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-brnoCeitec06/anat/sub-brnoCeitec06_flip-2_mt-off_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Etienne Bergeron", - "Date": "2021-06-21 14:48:26" + "Date": "2021-06-21 14:48:26", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-brnoCeitec06/anat/sub-brnoCeitec06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-brnoCeitec06/anat/sub-brnoCeitec06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-brnoCeitec06/anat/sub-brnoCeitec06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-brnoCeitec06/anat/sub-brnoCeitec06_space-other_T1w_label-SC_seg.json b/derivatives/labels/sub-brnoCeitec06/anat/sub-brnoCeitec06_space-other_T1w_label-SC_seg.json index 6529168366..fa5ccece7d 100644 --- a/derivatives/labels/sub-brnoCeitec06/anat/sub-brnoCeitec06_space-other_T1w_label-SC_seg.json +++ b/derivatives/labels/sub-brnoCeitec06/anat/sub-brnoCeitec06_space-other_T1w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Etienne Bergeron", - "Date": "2021-06-18 13:02:58" + "Date": "2021-06-18 13:02:58", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-brnoCeitec06/anat/sub-brnoCeitec06_space-other_T2star_label-SC_seg.json b/derivatives/labels/sub-brnoCeitec06/anat/sub-brnoCeitec06_space-other_T2star_label-SC_seg.json index 1c8e651710..22005499ce 100644 --- a/derivatives/labels/sub-brnoCeitec06/anat/sub-brnoCeitec06_space-other_T2star_label-SC_seg.json +++ b/derivatives/labels/sub-brnoCeitec06/anat/sub-brnoCeitec06_space-other_T2star_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:05:58" + "Date": "2021-06-08 15:05:58", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-brnoCeitec06/anat/sub-brnoCeitec06_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-brnoCeitec06/anat/sub-brnoCeitec06_space-other_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-brnoCeitec06/anat/sub-brnoCeitec06_space-other_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-brnoCeitec06/anat/sub-brnoCeitec06_space-other_T2w_label-SC_seg.json b/derivatives/labels/sub-brnoCeitec06/anat/sub-brnoCeitec06_space-other_T2w_label-SC_seg.json index 5320cb6fc5..41868ca4b4 100644 --- a/derivatives/labels/sub-brnoCeitec06/anat/sub-brnoCeitec06_space-other_T2w_label-SC_seg.json +++ b/derivatives/labels/sub-brnoCeitec06/anat/sub-brnoCeitec06_space-other_T2w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Etienne Bergeron", - "Date": "2021-06-21 14:05:59" + "Date": "2021-06-21 14:05:59", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-brnoCeitec06/dwi/sub-brnoCeitec06_rec-average_dwi_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-brnoCeitec06/dwi/sub-brnoCeitec06_rec-average_dwi_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-brnoCeitec06/dwi/sub-brnoCeitec06_rec-average_dwi_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-brnoUhb01/anat/sub-brnoUhb01_flip-1_mt-on_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-brnoUhb01/anat/sub-brnoUhb01_flip-1_mt-on_space-other_MTS_label-SC_seg.json index 3c265028c1..8527f1fb53 100644 --- a/derivatives/labels/sub-brnoUhb01/anat/sub-brnoUhb01_flip-1_mt-on_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-brnoUhb01/anat/sub-brnoUhb01_flip-1_mt-on_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Etienne Bergeron", - "Date": "2021-06-23 11:12:13" + "Date": "2021-06-23 11:12:13", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-brnoUhb01/anat/sub-brnoUhb01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-brnoUhb01/anat/sub-brnoUhb01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-brnoUhb01/anat/sub-brnoUhb01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-brnoUhb01/anat/sub-brnoUhb01_flip-2_mt-off_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-brnoUhb01/anat/sub-brnoUhb01_flip-2_mt-off_space-other_MTS_label-SC_seg.json index 1c8e651710..686ad35f1a 100644 --- a/derivatives/labels/sub-brnoUhb01/anat/sub-brnoUhb01_flip-2_mt-off_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-brnoUhb01/anat/sub-brnoUhb01_flip-2_mt-off_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:05:58" + "Date": "2021-06-08 15:05:58", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-brnoUhb01/anat/sub-brnoUhb01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-brnoUhb01/anat/sub-brnoUhb01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-brnoUhb01/anat/sub-brnoUhb01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-brnoUhb01/anat/sub-brnoUhb01_space-other_T1w_label-SC_seg.json b/derivatives/labels/sub-brnoUhb01/anat/sub-brnoUhb01_space-other_T1w_label-SC_seg.json index 5a2e1124d6..0d6ad61d95 100644 --- a/derivatives/labels/sub-brnoUhb01/anat/sub-brnoUhb01_space-other_T1w_label-SC_seg.json +++ b/derivatives/labels/sub-brnoUhb01/anat/sub-brnoUhb01_space-other_T1w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Etienne Bergeron", - "Date": "2021-06-18 13:07:48" + "Date": "2021-06-18 13:07:48", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-brnoUhb01/anat/sub-brnoUhb01_space-other_T2star_label-SC_seg.json b/derivatives/labels/sub-brnoUhb01/anat/sub-brnoUhb01_space-other_T2star_label-SC_seg.json index 1c8e651710..22005499ce 100644 --- a/derivatives/labels/sub-brnoUhb01/anat/sub-brnoUhb01_space-other_T2star_label-SC_seg.json +++ b/derivatives/labels/sub-brnoUhb01/anat/sub-brnoUhb01_space-other_T2star_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:05:58" + "Date": "2021-06-08 15:05:58", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-brnoUhb01/anat/sub-brnoUhb01_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-brnoUhb01/anat/sub-brnoUhb01_space-other_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-brnoUhb01/anat/sub-brnoUhb01_space-other_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-brnoUhb01/anat/sub-brnoUhb01_space-other_T2w_label-SC_seg.json b/derivatives/labels/sub-brnoUhb01/anat/sub-brnoUhb01_space-other_T2w_label-SC_seg.json index 1c8e651710..894b949b94 100644 --- a/derivatives/labels/sub-brnoUhb01/anat/sub-brnoUhb01_space-other_T2w_label-SC_seg.json +++ b/derivatives/labels/sub-brnoUhb01/anat/sub-brnoUhb01_space-other_T2w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:05:58" + "Date": "2021-06-08 15:05:58", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-brnoUhb01/dwi/sub-brnoUhb01_rec-average_dwi_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-brnoUhb01/dwi/sub-brnoUhb01_rec-average_dwi_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-brnoUhb01/dwi/sub-brnoUhb01_rec-average_dwi_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-brnoUhb02/anat/sub-brnoUhb02_flip-1_mt-on_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-brnoUhb02/anat/sub-brnoUhb02_flip-1_mt-on_space-other_MTS_label-SC_seg.json index cf351901ee..8cc7c82d25 100644 --- a/derivatives/labels/sub-brnoUhb02/anat/sub-brnoUhb02_flip-1_mt-on_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-brnoUhb02/anat/sub-brnoUhb02_flip-1_mt-on_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Etienne Bergeron", - "Date": "2021-06-23 10:47:35" + "Date": "2021-06-23 10:47:35", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-brnoUhb02/anat/sub-brnoUhb02_flip-2_mt-off_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-brnoUhb02/anat/sub-brnoUhb02_flip-2_mt-off_space-other_MTS_label-SC_seg.json index 83a86edd41..2b6a1a0881 100644 --- a/derivatives/labels/sub-brnoUhb02/anat/sub-brnoUhb02_flip-2_mt-off_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-brnoUhb02/anat/sub-brnoUhb02_flip-2_mt-off_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Etienne Bergeron", - "Date": "2021-06-23 10:41:39" + "Date": "2021-06-23 10:41:39", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-brnoUhb02/anat/sub-brnoUhb02_space-other_T1w_label-SC_seg.json b/derivatives/labels/sub-brnoUhb02/anat/sub-brnoUhb02_space-other_T1w_label-SC_seg.json index bdb65692f1..17ed08fdf4 100644 --- a/derivatives/labels/sub-brnoUhb02/anat/sub-brnoUhb02_space-other_T1w_label-SC_seg.json +++ b/derivatives/labels/sub-brnoUhb02/anat/sub-brnoUhb02_space-other_T1w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-05 15:14:17" + "Date": "2022-10-05 15:14:17", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-brnoUhb02/anat/sub-brnoUhb02_space-other_T2star_label-SC_seg.json b/derivatives/labels/sub-brnoUhb02/anat/sub-brnoUhb02_space-other_T2star_label-SC_seg.json index 32024f5b15..595f76ba52 100644 --- a/derivatives/labels/sub-brnoUhb02/anat/sub-brnoUhb02_space-other_T2star_label-SC_seg.json +++ b/derivatives/labels/sub-brnoUhb02/anat/sub-brnoUhb02_space-other_T2star_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Etienne Bergeron", - "Date": "2021-06-23 11:32:30" + "Date": "2021-06-23 11:32:30", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-brnoUhb02/anat/sub-brnoUhb02_space-other_T2w_label-SC_seg.json b/derivatives/labels/sub-brnoUhb02/anat/sub-brnoUhb02_space-other_T2w_label-SC_seg.json index 512621a0e8..8d81d8d9bd 100644 --- a/derivatives/labels/sub-brnoUhb02/anat/sub-brnoUhb02_space-other_T2w_label-SC_seg.json +++ b/derivatives/labels/sub-brnoUhb02/anat/sub-brnoUhb02_space-other_T2w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Etienne Bergeron", - "Date": "2021-06-23 10:30:02" + "Date": "2021-06-23 10:30:02", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-brnoUhb03/anat/sub-brnoUhb03_flip-1_mt-on_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-brnoUhb03/anat/sub-brnoUhb03_flip-1_mt-on_space-other_MTS_label-SC_seg.json index fd4f86855c..eefd305c20 100644 --- a/derivatives/labels/sub-brnoUhb03/anat/sub-brnoUhb03_flip-1_mt-on_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-brnoUhb03/anat/sub-brnoUhb03_flip-1_mt-on_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Etienne Bergeron", - "Date": "2021-06-23 11:17:37" + "Date": "2021-06-23 11:17:37", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-brnoUhb03/anat/sub-brnoUhb03_flip-2_mt-off_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-brnoUhb03/anat/sub-brnoUhb03_flip-2_mt-off_space-other_MTS_label-SC_seg.json index fbe52577af..a8bdc14c0d 100644 --- a/derivatives/labels/sub-brnoUhb03/anat/sub-brnoUhb03_flip-2_mt-off_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-brnoUhb03/anat/sub-brnoUhb03_flip-2_mt-off_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Etienne Bergeron", - "Date": "2021-06-23 10:44:33" + "Date": "2021-06-23 10:44:33", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-brnoUhb03/anat/sub-brnoUhb03_space-other_T1w_label-SC_seg.json b/derivatives/labels/sub-brnoUhb03/anat/sub-brnoUhb03_space-other_T1w_label-SC_seg.json index 261e0443f7..1c64a2e632 100644 --- a/derivatives/labels/sub-brnoUhb03/anat/sub-brnoUhb03_space-other_T1w_label-SC_seg.json +++ b/derivatives/labels/sub-brnoUhb03/anat/sub-brnoUhb03_space-other_T1w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Etienne Bergeron", - "Date": "2021-06-18 13:20:29" + "Date": "2021-06-18 13:20:29", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-brnoUhb03/anat/sub-brnoUhb03_space-other_T2star_label-SC_seg.json b/derivatives/labels/sub-brnoUhb03/anat/sub-brnoUhb03_space-other_T2star_label-SC_seg.json index fff884a6b6..cf9cf0af5a 100644 --- a/derivatives/labels/sub-brnoUhb03/anat/sub-brnoUhb03_space-other_T2star_label-SC_seg.json +++ b/derivatives/labels/sub-brnoUhb03/anat/sub-brnoUhb03_space-other_T2star_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Etienne Bergeron", - "Date": "2021-06-23 11:52:26" + "Date": "2021-06-23 11:52:26", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-brnoUhb03/anat/sub-brnoUhb03_space-other_T2w_label-SC_seg.json b/derivatives/labels/sub-brnoUhb03/anat/sub-brnoUhb03_space-other_T2w_label-SC_seg.json index 18d2e3796e..a2ba2c6f63 100644 --- a/derivatives/labels/sub-brnoUhb03/anat/sub-brnoUhb03_space-other_T2w_label-SC_seg.json +++ b/derivatives/labels/sub-brnoUhb03/anat/sub-brnoUhb03_space-other_T2w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Etienne Bergeron", - "Date": "2021-06-23 10:39:11" + "Date": "2021-06-23 10:39:11", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-brnoUhb04/anat/sub-brnoUhb04_flip-1_mt-on_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-brnoUhb04/anat/sub-brnoUhb04_flip-1_mt-on_space-other_MTS_label-SC_seg.json index 90ef7b9fe9..6b0437cb4b 100644 --- a/derivatives/labels/sub-brnoUhb04/anat/sub-brnoUhb04_flip-1_mt-on_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-brnoUhb04/anat/sub-brnoUhb04_flip-1_mt-on_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Etienne Bergeron", - "Date": "2021-06-25 13:45:25" + "Date": "2021-06-25 13:45:25", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-brnoUhb04/anat/sub-brnoUhb04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-brnoUhb04/anat/sub-brnoUhb04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-brnoUhb04/anat/sub-brnoUhb04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-brnoUhb04/anat/sub-brnoUhb04_flip-2_mt-off_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-brnoUhb04/anat/sub-brnoUhb04_flip-2_mt-off_space-other_MTS_label-SC_seg.json index 8738578740..81e9a88035 100644 --- a/derivatives/labels/sub-brnoUhb04/anat/sub-brnoUhb04_flip-2_mt-off_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-brnoUhb04/anat/sub-brnoUhb04_flip-2_mt-off_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Etienne Bergeron", - "Date": "2021-06-25 12:48:56" + "Date": "2021-06-25 12:48:56", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-brnoUhb04/anat/sub-brnoUhb04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-brnoUhb04/anat/sub-brnoUhb04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-brnoUhb04/anat/sub-brnoUhb04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-brnoUhb04/anat/sub-brnoUhb04_space-other_T1w_label-SC_seg.json b/derivatives/labels/sub-brnoUhb04/anat/sub-brnoUhb04_space-other_T1w_label-SC_seg.json index 93448d97d9..93eccae5bc 100644 --- a/derivatives/labels/sub-brnoUhb04/anat/sub-brnoUhb04_space-other_T1w_label-SC_seg.json +++ b/derivatives/labels/sub-brnoUhb04/anat/sub-brnoUhb04_space-other_T1w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Etienne Bergeron", - "Date": "2021-06-23 10:16:02" + "Date": "2021-06-23 10:16:02", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-brnoUhb04/anat/sub-brnoUhb04_space-other_T2star_label-SC_seg.json b/derivatives/labels/sub-brnoUhb04/anat/sub-brnoUhb04_space-other_T2star_label-SC_seg.json index 1c8e651710..22005499ce 100644 --- a/derivatives/labels/sub-brnoUhb04/anat/sub-brnoUhb04_space-other_T2star_label-SC_seg.json +++ b/derivatives/labels/sub-brnoUhb04/anat/sub-brnoUhb04_space-other_T2star_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:05:58" + "Date": "2021-06-08 15:05:58", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-brnoUhb04/anat/sub-brnoUhb04_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-brnoUhb04/anat/sub-brnoUhb04_space-other_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-brnoUhb04/anat/sub-brnoUhb04_space-other_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-brnoUhb04/anat/sub-brnoUhb04_space-other_T2w_label-SC_seg.json b/derivatives/labels/sub-brnoUhb04/anat/sub-brnoUhb04_space-other_T2w_label-SC_seg.json index 84cbce8b1b..80b5ce310f 100644 --- a/derivatives/labels/sub-brnoUhb04/anat/sub-brnoUhb04_space-other_T2w_label-SC_seg.json +++ b/derivatives/labels/sub-brnoUhb04/anat/sub-brnoUhb04_space-other_T2w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Etienne Bergeron", - "Date": "2021-06-23 16:13:34" + "Date": "2021-06-23 16:13:34", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-brnoUhb04/dwi/sub-brnoUhb04_rec-average_dwi_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-brnoUhb04/dwi/sub-brnoUhb04_rec-average_dwi_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-brnoUhb04/dwi/sub-brnoUhb04_rec-average_dwi_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-brnoUhb05/anat/sub-brnoUhb05_flip-1_mt-on_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-brnoUhb05/anat/sub-brnoUhb05_flip-1_mt-on_space-other_MTS_label-SC_seg.json index 45db483cac..bbfab5bb6c 100644 --- a/derivatives/labels/sub-brnoUhb05/anat/sub-brnoUhb05_flip-1_mt-on_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-brnoUhb05/anat/sub-brnoUhb05_flip-1_mt-on_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Etienne Bergeron", - "Date": "2021-06-25 14:00:43" + "Date": "2021-06-25 14:00:43", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-brnoUhb05/anat/sub-brnoUhb05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-brnoUhb05/anat/sub-brnoUhb05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-brnoUhb05/anat/sub-brnoUhb05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-brnoUhb05/anat/sub-brnoUhb05_flip-2_mt-off_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-brnoUhb05/anat/sub-brnoUhb05_flip-2_mt-off_space-other_MTS_label-SC_seg.json index e751a999d3..1975c24a5c 100644 --- a/derivatives/labels/sub-brnoUhb05/anat/sub-brnoUhb05_flip-2_mt-off_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-brnoUhb05/anat/sub-brnoUhb05_flip-2_mt-off_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Etienne Bergeron", - "Date": "2021-06-25 13:50:19" + "Date": "2021-06-25 13:50:19", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-brnoUhb05/anat/sub-brnoUhb05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-brnoUhb05/anat/sub-brnoUhb05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-brnoUhb05/anat/sub-brnoUhb05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-brnoUhb05/anat/sub-brnoUhb05_space-other_T1w_label-SC_seg.json b/derivatives/labels/sub-brnoUhb05/anat/sub-brnoUhb05_space-other_T1w_label-SC_seg.json index 9f16c33e6b..c61851c9f4 100644 --- a/derivatives/labels/sub-brnoUhb05/anat/sub-brnoUhb05_space-other_T1w_label-SC_seg.json +++ b/derivatives/labels/sub-brnoUhb05/anat/sub-brnoUhb05_space-other_T1w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-08-04 11:28:09" + "Date": "2021-08-04 11:28:09", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-brnoUhb05/anat/sub-brnoUhb05_space-other_T2star_label-SC_seg.json b/derivatives/labels/sub-brnoUhb05/anat/sub-brnoUhb05_space-other_T2star_label-SC_seg.json index 244316de5b..c63052bd94 100644 --- a/derivatives/labels/sub-brnoUhb05/anat/sub-brnoUhb05_space-other_T2star_label-SC_seg.json +++ b/derivatives/labels/sub-brnoUhb05/anat/sub-brnoUhb05_space-other_T2star_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Etienne Bergeron", - "Date": "2021-06-25 14:11:01" + "Date": "2021-06-25 14:11:01", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-brnoUhb05/anat/sub-brnoUhb05_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-brnoUhb05/anat/sub-brnoUhb05_space-other_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-brnoUhb05/anat/sub-brnoUhb05_space-other_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-brnoUhb05/anat/sub-brnoUhb05_space-other_T2w_label-SC_seg.json b/derivatives/labels/sub-brnoUhb05/anat/sub-brnoUhb05_space-other_T2w_label-SC_seg.json index 39197838c4..e927a7592e 100644 --- a/derivatives/labels/sub-brnoUhb05/anat/sub-brnoUhb05_space-other_T2w_label-SC_seg.json +++ b/derivatives/labels/sub-brnoUhb05/anat/sub-brnoUhb05_space-other_T2w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Etienne Bergeron", - "Date": "2021-06-25 12:55:46" + "Date": "2021-06-25 12:55:46", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-brnoUhb05/dwi/sub-brnoUhb05_rec-average_dwi_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-brnoUhb05/dwi/sub-brnoUhb05_rec-average_dwi_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-brnoUhb05/dwi/sub-brnoUhb05_rec-average_dwi_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-brnoUhb06/anat/sub-brnoUhb06_flip-1_mt-on_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-brnoUhb06/anat/sub-brnoUhb06_flip-1_mt-on_space-other_MTS_label-SC_seg.json index c979f18387..cc74cb47cc 100644 --- a/derivatives/labels/sub-brnoUhb06/anat/sub-brnoUhb06_flip-1_mt-on_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-brnoUhb06/anat/sub-brnoUhb06_flip-1_mt-on_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-05 15:16:14" + "Date": "2022-10-05 15:16:14", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-brnoUhb06/anat/sub-brnoUhb06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-brnoUhb06/anat/sub-brnoUhb06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-brnoUhb06/anat/sub-brnoUhb06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-brnoUhb06/anat/sub-brnoUhb06_flip-2_mt-off_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-brnoUhb06/anat/sub-brnoUhb06_flip-2_mt-off_space-other_MTS_label-SC_seg.json index 1c8e651710..686ad35f1a 100644 --- a/derivatives/labels/sub-brnoUhb06/anat/sub-brnoUhb06_flip-2_mt-off_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-brnoUhb06/anat/sub-brnoUhb06_flip-2_mt-off_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:05:58" + "Date": "2021-06-08 15:05:58", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-brnoUhb06/anat/sub-brnoUhb06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-brnoUhb06/anat/sub-brnoUhb06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-brnoUhb06/anat/sub-brnoUhb06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-brnoUhb06/anat/sub-brnoUhb06_space-other_T1w_label-SC_seg.json b/derivatives/labels/sub-brnoUhb06/anat/sub-brnoUhb06_space-other_T1w_label-SC_seg.json index b513e83c38..5da130fc4f 100644 --- a/derivatives/labels/sub-brnoUhb06/anat/sub-brnoUhb06_space-other_T1w_label-SC_seg.json +++ b/derivatives/labels/sub-brnoUhb06/anat/sub-brnoUhb06_space-other_T1w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Etienne Bergeron", - "Date": "2021-06-23 10:25:19" + "Date": "2021-06-23 10:25:19", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-brnoUhb06/anat/sub-brnoUhb06_space-other_T2star_label-SC_seg.json b/derivatives/labels/sub-brnoUhb06/anat/sub-brnoUhb06_space-other_T2star_label-SC_seg.json index c9d59daee9..f5bcd7e129 100644 --- a/derivatives/labels/sub-brnoUhb06/anat/sub-brnoUhb06_space-other_T2star_label-SC_seg.json +++ b/derivatives/labels/sub-brnoUhb06/anat/sub-brnoUhb06_space-other_T2star_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Etienne Bergeron", - "Date": "2021-06-25 13:55:35" + "Date": "2021-06-25 13:55:35", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-brnoUhb06/anat/sub-brnoUhb06_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-brnoUhb06/anat/sub-brnoUhb06_space-other_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-brnoUhb06/anat/sub-brnoUhb06_space-other_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-brnoUhb06/anat/sub-brnoUhb06_space-other_T2w_label-SC_seg.json b/derivatives/labels/sub-brnoUhb06/anat/sub-brnoUhb06_space-other_T2w_label-SC_seg.json index d9a2eaafbd..145180a099 100644 --- a/derivatives/labels/sub-brnoUhb06/anat/sub-brnoUhb06_space-other_T2w_label-SC_seg.json +++ b/derivatives/labels/sub-brnoUhb06/anat/sub-brnoUhb06_space-other_T2w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-07-08 10:06:53" + "Date": "2021-07-08 10:06:53", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-brnoUhb06/dwi/sub-brnoUhb06_rec-average_dwi_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-brnoUhb06/dwi/sub-brnoUhb06_rec-average_dwi_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-brnoUhb06/dwi/sub-brnoUhb06_rec-average_dwi_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-brnoUhb07/anat/sub-brnoUhb07_flip-1_mt-on_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-brnoUhb07/anat/sub-brnoUhb07_flip-1_mt-on_space-other_MTS_label-SC_seg.json index c234768c6a..c773f5938c 100644 --- a/derivatives/labels/sub-brnoUhb07/anat/sub-brnoUhb07_flip-1_mt-on_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-brnoUhb07/anat/sub-brnoUhb07_flip-1_mt-on_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Etienne Bergeron", - "Date": "2021-06-25 14:03:01" + "Date": "2021-06-25 14:03:01", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-brnoUhb07/anat/sub-brnoUhb07_flip-2_mt-off_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-brnoUhb07/anat/sub-brnoUhb07_flip-2_mt-off_space-other_MTS_label-SC_seg.json index aabe04b6c8..8b72b3b470 100644 --- a/derivatives/labels/sub-brnoUhb07/anat/sub-brnoUhb07_flip-2_mt-off_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-brnoUhb07/anat/sub-brnoUhb07_flip-2_mt-off_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Etienne Bergeron", - "Date": "2021-06-25 13:54:00" + "Date": "2021-06-25 13:54:00", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-brnoUhb07/anat/sub-brnoUhb07_space-other_T1w_label-SC_seg.json b/derivatives/labels/sub-brnoUhb07/anat/sub-brnoUhb07_space-other_T1w_label-SC_seg.json index 594c547bc9..f99fb6b965 100644 --- a/derivatives/labels/sub-brnoUhb07/anat/sub-brnoUhb07_space-other_T1w_label-SC_seg.json +++ b/derivatives/labels/sub-brnoUhb07/anat/sub-brnoUhb07_space-other_T1w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-05 15:33:40" + "Date": "2022-10-05 15:33:40", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-brnoUhb07/anat/sub-brnoUhb07_space-other_T2star_label-SC_seg.json b/derivatives/labels/sub-brnoUhb07/anat/sub-brnoUhb07_space-other_T2star_label-SC_seg.json index dfbc642336..18f4e55831 100644 --- a/derivatives/labels/sub-brnoUhb07/anat/sub-brnoUhb07_space-other_T2star_label-SC_seg.json +++ b/derivatives/labels/sub-brnoUhb07/anat/sub-brnoUhb07_space-other_T2star_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Etienne Bergeron", - "Date": "2021-06-25 15:20:41" + "Date": "2021-06-25 15:20:41", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-brnoUhb07/anat/sub-brnoUhb07_space-other_T2w_label-SC_seg.json b/derivatives/labels/sub-brnoUhb07/anat/sub-brnoUhb07_space-other_T2w_label-SC_seg.json index 4be61d0e30..b4e6e9431e 100644 --- a/derivatives/labels/sub-brnoUhb07/anat/sub-brnoUhb07_space-other_T2w_label-SC_seg.json +++ b/derivatives/labels/sub-brnoUhb07/anat/sub-brnoUhb07_space-other_T2w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-07-08 10:07:45" + "Date": "2021-07-08 10:07:45", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-brnoUhb08/anat/sub-brnoUhb08_flip-1_mt-on_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-brnoUhb08/anat/sub-brnoUhb08_flip-1_mt-on_space-other_MTS_label-SC_seg.json index 0aae8021d1..b568cc73ad 100644 --- a/derivatives/labels/sub-brnoUhb08/anat/sub-brnoUhb08_flip-1_mt-on_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-brnoUhb08/anat/sub-brnoUhb08_flip-1_mt-on_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Etienne Bergeron", - "Date": "2021-06-25 13:35:43" + "Date": "2021-06-25 13:35:43", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-brnoUhb08/anat/sub-brnoUhb08_flip-2_mt-off_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-brnoUhb08/anat/sub-brnoUhb08_flip-2_mt-off_space-other_MTS_label-SC_seg.json index 1c8e651710..686ad35f1a 100644 --- a/derivatives/labels/sub-brnoUhb08/anat/sub-brnoUhb08_flip-2_mt-off_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-brnoUhb08/anat/sub-brnoUhb08_flip-2_mt-off_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:05:58" + "Date": "2021-06-08 15:05:58", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-brnoUhb08/anat/sub-brnoUhb08_space-other_T1w_label-SC_seg.json b/derivatives/labels/sub-brnoUhb08/anat/sub-brnoUhb08_space-other_T1w_label-SC_seg.json index 6de9846400..bb73c6588a 100644 --- a/derivatives/labels/sub-brnoUhb08/anat/sub-brnoUhb08_space-other_T1w_label-SC_seg.json +++ b/derivatives/labels/sub-brnoUhb08/anat/sub-brnoUhb08_space-other_T1w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-05 15:43:25" + "Date": "2022-10-05 15:43:25", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-brnoUhb08/anat/sub-brnoUhb08_space-other_T2star_label-SC_seg.json b/derivatives/labels/sub-brnoUhb08/anat/sub-brnoUhb08_space-other_T2star_label-SC_seg.json index 1c8e651710..22005499ce 100644 --- a/derivatives/labels/sub-brnoUhb08/anat/sub-brnoUhb08_space-other_T2star_label-SC_seg.json +++ b/derivatives/labels/sub-brnoUhb08/anat/sub-brnoUhb08_space-other_T2star_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:05:58" + "Date": "2021-06-08 15:05:58", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-brnoUhb08/anat/sub-brnoUhb08_space-other_T2w_label-SC_seg.json b/derivatives/labels/sub-brnoUhb08/anat/sub-brnoUhb08_space-other_T2w_label-SC_seg.json index 1c8e651710..894b949b94 100644 --- a/derivatives/labels/sub-brnoUhb08/anat/sub-brnoUhb08_space-other_T2w_label-SC_seg.json +++ b/derivatives/labels/sub-brnoUhb08/anat/sub-brnoUhb08_space-other_T2w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:05:58" + "Date": "2021-06-08 15:05:58", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-cardiff01/anat/sub-cardiff01_flip-1_mt-on_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-cardiff01/anat/sub-cardiff01_flip-1_mt-on_space-other_MTS_label-SC_seg.json index 1c8e651710..686ad35f1a 100644 --- a/derivatives/labels/sub-cardiff01/anat/sub-cardiff01_flip-1_mt-on_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-cardiff01/anat/sub-cardiff01_flip-1_mt-on_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:05:58" + "Date": "2021-06-08 15:05:58", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-cardiff01/anat/sub-cardiff01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-cardiff01/anat/sub-cardiff01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-cardiff01/anat/sub-cardiff01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-cardiff01/anat/sub-cardiff01_flip-2_mt-off_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-cardiff01/anat/sub-cardiff01_flip-2_mt-off_space-other_MTS_label-SC_seg.json index 29878e5579..65491775cc 100644 --- a/derivatives/labels/sub-cardiff01/anat/sub-cardiff01_flip-2_mt-off_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-cardiff01/anat/sub-cardiff01_flip-2_mt-off_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Etienne Bergeron", - "Date": "2021-06-25 12:40:49" + "Date": "2021-06-25 12:40:49", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-cardiff01/anat/sub-cardiff01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-cardiff01/anat/sub-cardiff01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-cardiff01/anat/sub-cardiff01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-cardiff01/anat/sub-cardiff01_space-other_T1w_label-SC_seg.json b/derivatives/labels/sub-cardiff01/anat/sub-cardiff01_space-other_T1w_label-SC_seg.json index df3f06b271..2bc12099a9 100644 --- a/derivatives/labels/sub-cardiff01/anat/sub-cardiff01_space-other_T1w_label-SC_seg.json +++ b/derivatives/labels/sub-cardiff01/anat/sub-cardiff01_space-other_T1w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Etienne Bergeron", - "Date": "2021-06-21 14:10:19" + "Date": "2021-06-21 14:10:19", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-cardiff01/anat/sub-cardiff01_space-other_T2star_label-SC_seg.json b/derivatives/labels/sub-cardiff01/anat/sub-cardiff01_space-other_T2star_label-SC_seg.json index 1c8e651710..22005499ce 100644 --- a/derivatives/labels/sub-cardiff01/anat/sub-cardiff01_space-other_T2star_label-SC_seg.json +++ b/derivatives/labels/sub-cardiff01/anat/sub-cardiff01_space-other_T2star_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:05:58" + "Date": "2021-06-08 15:05:58", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-cardiff01/anat/sub-cardiff01_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-cardiff01/anat/sub-cardiff01_space-other_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-cardiff01/anat/sub-cardiff01_space-other_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-cardiff01/anat/sub-cardiff01_space-other_T2w_label-SC_seg.json b/derivatives/labels/sub-cardiff01/anat/sub-cardiff01_space-other_T2w_label-SC_seg.json index f466c3f8f9..8493da9685 100644 --- a/derivatives/labels/sub-cardiff01/anat/sub-cardiff01_space-other_T2w_label-SC_seg.json +++ b/derivatives/labels/sub-cardiff01/anat/sub-cardiff01_space-other_T2w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Etienne Bergeron", - "Date": "2021-06-23 11:54:51" + "Date": "2021-06-23 11:54:51", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-cardiff01/dwi/sub-cardiff01_rec-average_dwi_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-cardiff01/dwi/sub-cardiff01_rec-average_dwi_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-cardiff01/dwi/sub-cardiff01_rec-average_dwi_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-cardiff02/anat/sub-cardiff02_flip-1_mt-on_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-cardiff02/anat/sub-cardiff02_flip-1_mt-on_space-other_MTS_label-SC_seg.json index 8d7e8675e7..f72f9f65f2 100644 --- a/derivatives/labels/sub-cardiff02/anat/sub-cardiff02_flip-1_mt-on_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-cardiff02/anat/sub-cardiff02_flip-1_mt-on_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:05:59" + "Date": "2021-06-08 15:05:59", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-cardiff02/anat/sub-cardiff02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-cardiff02/anat/sub-cardiff02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-cardiff02/anat/sub-cardiff02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-cardiff02/anat/sub-cardiff02_flip-2_mt-off_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-cardiff02/anat/sub-cardiff02_flip-2_mt-off_space-other_MTS_label-SC_seg.json index 94755f0d64..82d3b2dced 100644 --- a/derivatives/labels/sub-cardiff02/anat/sub-cardiff02_flip-2_mt-off_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-cardiff02/anat/sub-cardiff02_flip-2_mt-off_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Etienne Bergeron", - "Date": "2021-06-25 12:39:38" + "Date": "2021-06-25 12:39:38", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-cardiff02/anat/sub-cardiff02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-cardiff02/anat/sub-cardiff02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-cardiff02/anat/sub-cardiff02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-cardiff02/anat/sub-cardiff02_space-other_T1w_label-SC_seg.json b/derivatives/labels/sub-cardiff02/anat/sub-cardiff02_space-other_T1w_label-SC_seg.json index db4dcba99f..9c9a8de2c0 100644 --- a/derivatives/labels/sub-cardiff02/anat/sub-cardiff02_space-other_T1w_label-SC_seg.json +++ b/derivatives/labels/sub-cardiff02/anat/sub-cardiff02_space-other_T1w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Etienne Bergeron", - "Date": "2021-06-21 14:27:44" + "Date": "2021-06-21 14:27:44", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-cardiff02/anat/sub-cardiff02_space-other_T2star_label-SC_seg.json b/derivatives/labels/sub-cardiff02/anat/sub-cardiff02_space-other_T2star_label-SC_seg.json index 8d7e8675e7..ac63a88353 100644 --- a/derivatives/labels/sub-cardiff02/anat/sub-cardiff02_space-other_T2star_label-SC_seg.json +++ b/derivatives/labels/sub-cardiff02/anat/sub-cardiff02_space-other_T2star_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:05:59" + "Date": "2021-06-08 15:05:59", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-cardiff02/anat/sub-cardiff02_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-cardiff02/anat/sub-cardiff02_space-other_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-cardiff02/anat/sub-cardiff02_space-other_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-cardiff02/anat/sub-cardiff02_space-other_T2w_label-SC_seg.json b/derivatives/labels/sub-cardiff02/anat/sub-cardiff02_space-other_T2w_label-SC_seg.json index d622b2e7a0..9e61bec319 100644 --- a/derivatives/labels/sub-cardiff02/anat/sub-cardiff02_space-other_T2w_label-SC_seg.json +++ b/derivatives/labels/sub-cardiff02/anat/sub-cardiff02_space-other_T2w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Etienne Bergeron", - "Date": "2021-06-23 12:58:35" + "Date": "2021-06-23 12:58:35", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-cardiff02/dwi/sub-cardiff02_rec-average_dwi_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-cardiff02/dwi/sub-cardiff02_rec-average_dwi_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-cardiff02/dwi/sub-cardiff02_rec-average_dwi_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-cardiff03/anat/sub-cardiff03_flip-1_mt-on_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-cardiff03/anat/sub-cardiff03_flip-1_mt-on_space-other_MTS_label-SC_seg.json index 8d7e8675e7..f72f9f65f2 100644 --- a/derivatives/labels/sub-cardiff03/anat/sub-cardiff03_flip-1_mt-on_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-cardiff03/anat/sub-cardiff03_flip-1_mt-on_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:05:59" + "Date": "2021-06-08 15:05:59", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-cardiff03/anat/sub-cardiff03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-cardiff03/anat/sub-cardiff03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-cardiff03/anat/sub-cardiff03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-cardiff03/anat/sub-cardiff03_flip-2_mt-off_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-cardiff03/anat/sub-cardiff03_flip-2_mt-off_space-other_MTS_label-SC_seg.json index 4adf2c4c3d..672a8e748e 100644 --- a/derivatives/labels/sub-cardiff03/anat/sub-cardiff03_flip-2_mt-off_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-cardiff03/anat/sub-cardiff03_flip-2_mt-off_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Etienne Bergeron", - "Date": "2021-06-25 12:45:54" + "Date": "2021-06-25 12:45:54", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-cardiff03/anat/sub-cardiff03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-cardiff03/anat/sub-cardiff03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-cardiff03/anat/sub-cardiff03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-cardiff03/anat/sub-cardiff03_space-other_T1w_label-SC_seg.json b/derivatives/labels/sub-cardiff03/anat/sub-cardiff03_space-other_T1w_label-SC_seg.json index 1e3b382cce..f01c8df94b 100644 --- a/derivatives/labels/sub-cardiff03/anat/sub-cardiff03_space-other_T1w_label-SC_seg.json +++ b/derivatives/labels/sub-cardiff03/anat/sub-cardiff03_space-other_T1w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Etienne Bergeron", - "Date": "2021-06-21 14:45:49" + "Date": "2021-06-21 14:45:49", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-cardiff03/anat/sub-cardiff03_space-other_T2star_label-SC_seg.json b/derivatives/labels/sub-cardiff03/anat/sub-cardiff03_space-other_T2star_label-SC_seg.json index 8d7e8675e7..ac63a88353 100644 --- a/derivatives/labels/sub-cardiff03/anat/sub-cardiff03_space-other_T2star_label-SC_seg.json +++ b/derivatives/labels/sub-cardiff03/anat/sub-cardiff03_space-other_T2star_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:05:59" + "Date": "2021-06-08 15:05:59", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-cardiff03/anat/sub-cardiff03_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-cardiff03/anat/sub-cardiff03_space-other_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-cardiff03/anat/sub-cardiff03_space-other_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-cardiff03/anat/sub-cardiff03_space-other_T2w_label-SC_seg.json b/derivatives/labels/sub-cardiff03/anat/sub-cardiff03_space-other_T2w_label-SC_seg.json index 8d7e8675e7..e4042077bf 100644 --- a/derivatives/labels/sub-cardiff03/anat/sub-cardiff03_space-other_T2w_label-SC_seg.json +++ b/derivatives/labels/sub-cardiff03/anat/sub-cardiff03_space-other_T2w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:05:59" + "Date": "2021-06-08 15:05:59", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-cardiff03/dwi/sub-cardiff03_rec-average_dwi_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-cardiff03/dwi/sub-cardiff03_rec-average_dwi_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-cardiff03/dwi/sub-cardiff03_rec-average_dwi_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-cardiff04/anat/sub-cardiff04_flip-1_mt-on_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-cardiff04/anat/sub-cardiff04_flip-1_mt-on_space-other_MTS_label-SC_seg.json index 8d7e8675e7..f72f9f65f2 100644 --- a/derivatives/labels/sub-cardiff04/anat/sub-cardiff04_flip-1_mt-on_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-cardiff04/anat/sub-cardiff04_flip-1_mt-on_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:05:59" + "Date": "2021-06-08 15:05:59", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-cardiff04/anat/sub-cardiff04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-cardiff04/anat/sub-cardiff04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-cardiff04/anat/sub-cardiff04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-cardiff04/anat/sub-cardiff04_flip-2_mt-off_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-cardiff04/anat/sub-cardiff04_flip-2_mt-off_space-other_MTS_label-SC_seg.json index 8d7e8675e7..f72f9f65f2 100644 --- a/derivatives/labels/sub-cardiff04/anat/sub-cardiff04_flip-2_mt-off_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-cardiff04/anat/sub-cardiff04_flip-2_mt-off_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:05:59" + "Date": "2021-06-08 15:05:59", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-cardiff04/anat/sub-cardiff04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-cardiff04/anat/sub-cardiff04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-cardiff04/anat/sub-cardiff04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-cardiff04/anat/sub-cardiff04_space-other_T1w_label-SC_seg.json b/derivatives/labels/sub-cardiff04/anat/sub-cardiff04_space-other_T1w_label-SC_seg.json index 6b4da4d3ec..bdf44f7388 100644 --- a/derivatives/labels/sub-cardiff04/anat/sub-cardiff04_space-other_T1w_label-SC_seg.json +++ b/derivatives/labels/sub-cardiff04/anat/sub-cardiff04_space-other_T1w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Etienne Bergeron", - "Date": "2021-06-21 14:39:47" + "Date": "2021-06-21 14:39:47", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-cardiff04/anat/sub-cardiff04_space-other_T2star_label-SC_seg.json b/derivatives/labels/sub-cardiff04/anat/sub-cardiff04_space-other_T2star_label-SC_seg.json index 8d7e8675e7..ac63a88353 100644 --- a/derivatives/labels/sub-cardiff04/anat/sub-cardiff04_space-other_T2star_label-SC_seg.json +++ b/derivatives/labels/sub-cardiff04/anat/sub-cardiff04_space-other_T2star_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:05:59" + "Date": "2021-06-08 15:05:59", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-cardiff04/anat/sub-cardiff04_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-cardiff04/anat/sub-cardiff04_space-other_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-cardiff04/anat/sub-cardiff04_space-other_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-cardiff04/anat/sub-cardiff04_space-other_T2w_label-SC_seg.json b/derivatives/labels/sub-cardiff04/anat/sub-cardiff04_space-other_T2w_label-SC_seg.json index 75848da274..c36478ea54 100644 --- a/derivatives/labels/sub-cardiff04/anat/sub-cardiff04_space-other_T2w_label-SC_seg.json +++ b/derivatives/labels/sub-cardiff04/anat/sub-cardiff04_space-other_T2w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Etienne Bergeron", - "Date": "2021-06-23 15:42:36" + "Date": "2021-06-23 15:42:36", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-cardiff04/dwi/sub-cardiff04_rec-average_dwi_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-cardiff04/dwi/sub-cardiff04_rec-average_dwi_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-cardiff04/dwi/sub-cardiff04_rec-average_dwi_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-cardiff05/anat/sub-cardiff05_flip-1_mt-on_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-cardiff05/anat/sub-cardiff05_flip-1_mt-on_space-other_MTS_label-SC_seg.json index 8d7e8675e7..f72f9f65f2 100644 --- a/derivatives/labels/sub-cardiff05/anat/sub-cardiff05_flip-1_mt-on_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-cardiff05/anat/sub-cardiff05_flip-1_mt-on_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:05:59" + "Date": "2021-06-08 15:05:59", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-cardiff05/anat/sub-cardiff05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-cardiff05/anat/sub-cardiff05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-cardiff05/anat/sub-cardiff05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-cardiff05/anat/sub-cardiff05_flip-2_mt-off_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-cardiff05/anat/sub-cardiff05_flip-2_mt-off_space-other_MTS_label-SC_seg.json index 7fb7eddc30..53f773fca2 100644 --- a/derivatives/labels/sub-cardiff05/anat/sub-cardiff05_flip-2_mt-off_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-cardiff05/anat/sub-cardiff05_flip-2_mt-off_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Etienne Bergeron", - "Date": "2021-06-25 12:44:09" + "Date": "2021-06-25 12:44:09", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-cardiff05/anat/sub-cardiff05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-cardiff05/anat/sub-cardiff05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-cardiff05/anat/sub-cardiff05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-cardiff05/anat/sub-cardiff05_space-other_T1w_label-SC_seg.json b/derivatives/labels/sub-cardiff05/anat/sub-cardiff05_space-other_T1w_label-SC_seg.json index 235ed12a3c..8c4a5618b2 100644 --- a/derivatives/labels/sub-cardiff05/anat/sub-cardiff05_space-other_T1w_label-SC_seg.json +++ b/derivatives/labels/sub-cardiff05/anat/sub-cardiff05_space-other_T1w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Etienne Bergeron", - "Date": "2021-06-21 14:13:02" + "Date": "2021-06-21 14:13:02", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-cardiff05/anat/sub-cardiff05_space-other_T2star_label-SC_seg.json b/derivatives/labels/sub-cardiff05/anat/sub-cardiff05_space-other_T2star_label-SC_seg.json index 8d7e8675e7..ac63a88353 100644 --- a/derivatives/labels/sub-cardiff05/anat/sub-cardiff05_space-other_T2star_label-SC_seg.json +++ b/derivatives/labels/sub-cardiff05/anat/sub-cardiff05_space-other_T2star_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:05:59" + "Date": "2021-06-08 15:05:59", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-cardiff05/anat/sub-cardiff05_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-cardiff05/anat/sub-cardiff05_space-other_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-cardiff05/anat/sub-cardiff05_space-other_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-cardiff05/anat/sub-cardiff05_space-other_T2w_label-SC_seg.json b/derivatives/labels/sub-cardiff05/anat/sub-cardiff05_space-other_T2w_label-SC_seg.json index ca8b0c661e..eaf12407a8 100644 --- a/derivatives/labels/sub-cardiff05/anat/sub-cardiff05_space-other_T2w_label-SC_seg.json +++ b/derivatives/labels/sub-cardiff05/anat/sub-cardiff05_space-other_T2w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Etienne Bergeron", - "Date": "2021-06-23 13:04:19" + "Date": "2021-06-23 13:04:19", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-cardiff05/dwi/sub-cardiff05_rec-average_dwi_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-cardiff05/dwi/sub-cardiff05_rec-average_dwi_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-cardiff05/dwi/sub-cardiff05_rec-average_dwi_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-cardiff06/anat/sub-cardiff06_flip-1_mt-on_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-cardiff06/anat/sub-cardiff06_flip-1_mt-on_space-other_MTS_label-SC_seg.json index 8d7e8675e7..f72f9f65f2 100644 --- a/derivatives/labels/sub-cardiff06/anat/sub-cardiff06_flip-1_mt-on_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-cardiff06/anat/sub-cardiff06_flip-1_mt-on_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:05:59" + "Date": "2021-06-08 15:05:59", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-cardiff06/anat/sub-cardiff06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-cardiff06/anat/sub-cardiff06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-cardiff06/anat/sub-cardiff06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-cardiff06/anat/sub-cardiff06_flip-2_mt-off_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-cardiff06/anat/sub-cardiff06_flip-2_mt-off_space-other_MTS_label-SC_seg.json index 8d7e8675e7..f72f9f65f2 100644 --- a/derivatives/labels/sub-cardiff06/anat/sub-cardiff06_flip-2_mt-off_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-cardiff06/anat/sub-cardiff06_flip-2_mt-off_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:05:59" + "Date": "2021-06-08 15:05:59", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-cardiff06/anat/sub-cardiff06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-cardiff06/anat/sub-cardiff06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-cardiff06/anat/sub-cardiff06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-cardiff06/anat/sub-cardiff06_space-other_T1w_label-SC_seg.json b/derivatives/labels/sub-cardiff06/anat/sub-cardiff06_space-other_T1w_label-SC_seg.json index dd45184efa..36fa4a352c 100644 --- a/derivatives/labels/sub-cardiff06/anat/sub-cardiff06_space-other_T1w_label-SC_seg.json +++ b/derivatives/labels/sub-cardiff06/anat/sub-cardiff06_space-other_T1w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Etienne Bergeron", - "Date": "2021-06-21 14:20:33" + "Date": "2021-06-21 14:20:33", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-cardiff06/anat/sub-cardiff06_space-other_T2star_label-SC_seg.json b/derivatives/labels/sub-cardiff06/anat/sub-cardiff06_space-other_T2star_label-SC_seg.json index 8d7e8675e7..ac63a88353 100644 --- a/derivatives/labels/sub-cardiff06/anat/sub-cardiff06_space-other_T2star_label-SC_seg.json +++ b/derivatives/labels/sub-cardiff06/anat/sub-cardiff06_space-other_T2star_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:05:59" + "Date": "2021-06-08 15:05:59", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-cardiff06/anat/sub-cardiff06_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-cardiff06/anat/sub-cardiff06_space-other_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-cardiff06/anat/sub-cardiff06_space-other_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-cardiff06/anat/sub-cardiff06_space-other_T2w_label-SC_seg.json b/derivatives/labels/sub-cardiff06/anat/sub-cardiff06_space-other_T2w_label-SC_seg.json index 2cfba21e31..ad261089b6 100644 --- a/derivatives/labels/sub-cardiff06/anat/sub-cardiff06_space-other_T2w_label-SC_seg.json +++ b/derivatives/labels/sub-cardiff06/anat/sub-cardiff06_space-other_T2w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Etienne Bergeron", - "Date": "2021-06-23 11:46:13" + "Date": "2021-06-23 11:46:13", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-cardiff06/dwi/sub-cardiff06_rec-average_dwi_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-cardiff06/dwi/sub-cardiff06_rec-average_dwi_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-cardiff06/dwi/sub-cardiff06_rec-average_dwi_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-cmrra01/anat/sub-cmrra01_flip-1_mt-on_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-cmrra01/anat/sub-cmrra01_flip-1_mt-on_space-other_MTS_label-SC_seg.json index 8d7e8675e7..f72f9f65f2 100644 --- a/derivatives/labels/sub-cmrra01/anat/sub-cmrra01_flip-1_mt-on_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-cmrra01/anat/sub-cmrra01_flip-1_mt-on_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:05:59" + "Date": "2021-06-08 15:05:59", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-cmrra01/anat/sub-cmrra01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-cmrra01/anat/sub-cmrra01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-cmrra01/anat/sub-cmrra01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-cmrra01/anat/sub-cmrra01_flip-2_mt-off_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-cmrra01/anat/sub-cmrra01_flip-2_mt-off_space-other_MTS_label-SC_seg.json index 3d9b8e80b1..b1897fdda2 100644 --- a/derivatives/labels/sub-cmrra01/anat/sub-cmrra01_flip-2_mt-off_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-cmrra01/anat/sub-cmrra01_flip-2_mt-off_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-05 15:47:55" + "Date": "2022-10-05 15:47:55", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-cmrra01/anat/sub-cmrra01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-cmrra01/anat/sub-cmrra01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-cmrra01/anat/sub-cmrra01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-cmrra01/anat/sub-cmrra01_space-other_T1w_label-SC_seg.json b/derivatives/labels/sub-cmrra01/anat/sub-cmrra01_space-other_T1w_label-SC_seg.json index 52533f5e0e..1a00db38fd 100644 --- a/derivatives/labels/sub-cmrra01/anat/sub-cmrra01_space-other_T1w_label-SC_seg.json +++ b/derivatives/labels/sub-cmrra01/anat/sub-cmrra01_space-other_T1w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Etienne Bergeron", - "Date": "2021-06-21 14:55:41" + "Date": "2021-06-21 14:55:41", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-cmrra01/anat/sub-cmrra01_space-other_T2star_label-SC_seg.json b/derivatives/labels/sub-cmrra01/anat/sub-cmrra01_space-other_T2star_label-SC_seg.json index 8d7e8675e7..ac63a88353 100644 --- a/derivatives/labels/sub-cmrra01/anat/sub-cmrra01_space-other_T2star_label-SC_seg.json +++ b/derivatives/labels/sub-cmrra01/anat/sub-cmrra01_space-other_T2star_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:05:59" + "Date": "2021-06-08 15:05:59", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-cmrra01/anat/sub-cmrra01_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-cmrra01/anat/sub-cmrra01_space-other_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-cmrra01/anat/sub-cmrra01_space-other_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-cmrra01/anat/sub-cmrra01_space-other_T2w_label-SC_seg.json b/derivatives/labels/sub-cmrra01/anat/sub-cmrra01_space-other_T2w_label-SC_seg.json index cf411bdbdd..2622b05fb1 100644 --- a/derivatives/labels/sub-cmrra01/anat/sub-cmrra01_space-other_T2w_label-SC_seg.json +++ b/derivatives/labels/sub-cmrra01/anat/sub-cmrra01_space-other_T2w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Etienne Bergeron", - "Date": "2021-06-23 16:00:11" + "Date": "2021-06-23 16:00:11", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-cmrra01/dwi/sub-cmrra01_rec-average_dwi_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-cmrra01/dwi/sub-cmrra01_rec-average_dwi_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-cmrra01/dwi/sub-cmrra01_rec-average_dwi_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-cmrra02/anat/sub-cmrra02_flip-1_mt-on_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-cmrra02/anat/sub-cmrra02_flip-1_mt-on_space-other_MTS_label-SC_seg.json index 9f0515223f..4bd74e22cc 100644 --- a/derivatives/labels/sub-cmrra02/anat/sub-cmrra02_flip-1_mt-on_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-cmrra02/anat/sub-cmrra02_flip-1_mt-on_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Etienne Bergeron", - "Date": "2021-06-25 13:46:31" + "Date": "2021-06-25 13:46:31", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-cmrra02/anat/sub-cmrra02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-cmrra02/anat/sub-cmrra02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-cmrra02/anat/sub-cmrra02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-cmrra02/anat/sub-cmrra02_flip-2_mt-off_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-cmrra02/anat/sub-cmrra02_flip-2_mt-off_space-other_MTS_label-SC_seg.json index 8d7e8675e7..f72f9f65f2 100644 --- a/derivatives/labels/sub-cmrra02/anat/sub-cmrra02_flip-2_mt-off_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-cmrra02/anat/sub-cmrra02_flip-2_mt-off_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:05:59" + "Date": "2021-06-08 15:05:59", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-cmrra02/anat/sub-cmrra02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-cmrra02/anat/sub-cmrra02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-cmrra02/anat/sub-cmrra02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-cmrra02/anat/sub-cmrra02_space-other_T1w_label-SC_seg.json b/derivatives/labels/sub-cmrra02/anat/sub-cmrra02_space-other_T1w_label-SC_seg.json index f62cd82939..edcc4eb2b4 100644 --- a/derivatives/labels/sub-cmrra02/anat/sub-cmrra02_space-other_T1w_label-SC_seg.json +++ b/derivatives/labels/sub-cmrra02/anat/sub-cmrra02_space-other_T1w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Etienne Bergeron", - "Date": "2021-06-21 14:52:37" + "Date": "2021-06-21 14:52:37", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-cmrra02/anat/sub-cmrra02_space-other_T2star_label-SC_seg.json b/derivatives/labels/sub-cmrra02/anat/sub-cmrra02_space-other_T2star_label-SC_seg.json index 8d7e8675e7..ac63a88353 100644 --- a/derivatives/labels/sub-cmrra02/anat/sub-cmrra02_space-other_T2star_label-SC_seg.json +++ b/derivatives/labels/sub-cmrra02/anat/sub-cmrra02_space-other_T2star_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:05:59" + "Date": "2021-06-08 15:05:59", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-cmrra02/anat/sub-cmrra02_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-cmrra02/anat/sub-cmrra02_space-other_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-cmrra02/anat/sub-cmrra02_space-other_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-cmrra02/anat/sub-cmrra02_space-other_T2w_label-SC_seg.json b/derivatives/labels/sub-cmrra02/anat/sub-cmrra02_space-other_T2w_label-SC_seg.json index 3cd1cddbaf..2911262b25 100644 --- a/derivatives/labels/sub-cmrra02/anat/sub-cmrra02_space-other_T2w_label-SC_seg.json +++ b/derivatives/labels/sub-cmrra02/anat/sub-cmrra02_space-other_T2w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Etienne Bergeron", - "Date": "2021-06-23 15:46:55" + "Date": "2021-06-23 15:46:55", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-cmrra02/dwi/sub-cmrra02_rec-average_dwi_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-cmrra02/dwi/sub-cmrra02_rec-average_dwi_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-cmrra02/dwi/sub-cmrra02_rec-average_dwi_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-cmrra03/anat/sub-cmrra03_flip-1_mt-on_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-cmrra03/anat/sub-cmrra03_flip-1_mt-on_space-other_MTS_label-SC_seg.json index bce58bab86..90e954201f 100644 --- a/derivatives/labels/sub-cmrra03/anat/sub-cmrra03_flip-1_mt-on_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-cmrra03/anat/sub-cmrra03_flip-1_mt-on_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:00" + "Date": "2021-06-08 15:06:00", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-cmrra03/anat/sub-cmrra03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-cmrra03/anat/sub-cmrra03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-cmrra03/anat/sub-cmrra03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-cmrra03/anat/sub-cmrra03_flip-2_mt-off_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-cmrra03/anat/sub-cmrra03_flip-2_mt-off_space-other_MTS_label-SC_seg.json index e36144d706..5dea14ed4a 100644 --- a/derivatives/labels/sub-cmrra03/anat/sub-cmrra03_flip-2_mt-off_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-cmrra03/anat/sub-cmrra03_flip-2_mt-off_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Etienne Bergeron", - "Date": "2021-06-25 12:42:18" + "Date": "2021-06-25 12:42:18", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-cmrra03/anat/sub-cmrra03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-cmrra03/anat/sub-cmrra03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-cmrra03/anat/sub-cmrra03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-cmrra03/anat/sub-cmrra03_space-other_T1w_label-SC_seg.json b/derivatives/labels/sub-cmrra03/anat/sub-cmrra03_space-other_T1w_label-SC_seg.json index 96fd9754ef..e616e20eeb 100644 --- a/derivatives/labels/sub-cmrra03/anat/sub-cmrra03_space-other_T1w_label-SC_seg.json +++ b/derivatives/labels/sub-cmrra03/anat/sub-cmrra03_space-other_T1w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Etienne Bergeron", - "Date": "2021-06-21 14:31:00" + "Date": "2021-06-21 14:31:00", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-cmrra03/anat/sub-cmrra03_space-other_T2star_label-SC_seg.json b/derivatives/labels/sub-cmrra03/anat/sub-cmrra03_space-other_T2star_label-SC_seg.json index bce58bab86..a59bd06cd9 100644 --- a/derivatives/labels/sub-cmrra03/anat/sub-cmrra03_space-other_T2star_label-SC_seg.json +++ b/derivatives/labels/sub-cmrra03/anat/sub-cmrra03_space-other_T2star_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:00" + "Date": "2021-06-08 15:06:00", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-cmrra03/anat/sub-cmrra03_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-cmrra03/anat/sub-cmrra03_space-other_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-cmrra03/anat/sub-cmrra03_space-other_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-cmrra03/anat/sub-cmrra03_space-other_T2w_label-SC_seg.json b/derivatives/labels/sub-cmrra03/anat/sub-cmrra03_space-other_T2w_label-SC_seg.json index 2de2cf201b..419d5a81cf 100644 --- a/derivatives/labels/sub-cmrra03/anat/sub-cmrra03_space-other_T2w_label-SC_seg.json +++ b/derivatives/labels/sub-cmrra03/anat/sub-cmrra03_space-other_T2w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Etienne Bergeron", - "Date": "2021-06-23 15:35:11" + "Date": "2021-06-23 15:35:11", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-cmrra03/dwi/sub-cmrra03_rec-average_dwi_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-cmrra03/dwi/sub-cmrra03_rec-average_dwi_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-cmrra03/dwi/sub-cmrra03_rec-average_dwi_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-cmrra04/anat/sub-cmrra04_flip-1_mt-on_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-cmrra04/anat/sub-cmrra04_flip-1_mt-on_space-other_MTS_label-SC_seg.json index da7a202ae1..00504c51c8 100644 --- a/derivatives/labels/sub-cmrra04/anat/sub-cmrra04_flip-1_mt-on_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-cmrra04/anat/sub-cmrra04_flip-1_mt-on_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Etienne Bergeron", - "Date": "2021-06-25 13:51:55" + "Date": "2021-06-25 13:51:55", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-cmrra04/anat/sub-cmrra04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-cmrra04/anat/sub-cmrra04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-cmrra04/anat/sub-cmrra04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-cmrra04/anat/sub-cmrra04_flip-2_mt-off_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-cmrra04/anat/sub-cmrra04_flip-2_mt-off_space-other_MTS_label-SC_seg.json index bce58bab86..90e954201f 100644 --- a/derivatives/labels/sub-cmrra04/anat/sub-cmrra04_flip-2_mt-off_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-cmrra04/anat/sub-cmrra04_flip-2_mt-off_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:00" + "Date": "2021-06-08 15:06:00", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-cmrra04/anat/sub-cmrra04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-cmrra04/anat/sub-cmrra04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-cmrra04/anat/sub-cmrra04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-cmrra04/anat/sub-cmrra04_space-other_T1w_label-SC_seg.json b/derivatives/labels/sub-cmrra04/anat/sub-cmrra04_space-other_T1w_label-SC_seg.json index a6fce84d79..546268434e 100644 --- a/derivatives/labels/sub-cmrra04/anat/sub-cmrra04_space-other_T1w_label-SC_seg.json +++ b/derivatives/labels/sub-cmrra04/anat/sub-cmrra04_space-other_T1w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Etienne Bergeron", - "Date": "2021-06-23 09:53:15" + "Date": "2021-06-23 09:53:15", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-cmrra04/anat/sub-cmrra04_space-other_T2star_label-SC_seg.json b/derivatives/labels/sub-cmrra04/anat/sub-cmrra04_space-other_T2star_label-SC_seg.json index bce58bab86..a59bd06cd9 100644 --- a/derivatives/labels/sub-cmrra04/anat/sub-cmrra04_space-other_T2star_label-SC_seg.json +++ b/derivatives/labels/sub-cmrra04/anat/sub-cmrra04_space-other_T2star_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:00" + "Date": "2021-06-08 15:06:00", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-cmrra04/anat/sub-cmrra04_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-cmrra04/anat/sub-cmrra04_space-other_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-cmrra04/anat/sub-cmrra04_space-other_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-cmrra04/anat/sub-cmrra04_space-other_T2w_label-SC_seg.json b/derivatives/labels/sub-cmrra04/anat/sub-cmrra04_space-other_T2w_label-SC_seg.json index 9552c3bb7e..a0d2e00bcc 100644 --- a/derivatives/labels/sub-cmrra04/anat/sub-cmrra04_space-other_T2w_label-SC_seg.json +++ b/derivatives/labels/sub-cmrra04/anat/sub-cmrra04_space-other_T2w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Etienne Bergeron", - "Date": "2021-06-25 10:10:47" + "Date": "2021-06-25 10:10:47", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-cmrra04/dwi/sub-cmrra04_rec-average_dwi_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-cmrra04/dwi/sub-cmrra04_rec-average_dwi_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-cmrra04/dwi/sub-cmrra04_rec-average_dwi_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-cmrra05/anat/sub-cmrra05_flip-1_mt-on_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-cmrra05/anat/sub-cmrra05_flip-1_mt-on_space-other_MTS_label-SC_seg.json index 1194a82c2a..c23a56cfd2 100644 --- a/derivatives/labels/sub-cmrra05/anat/sub-cmrra05_flip-1_mt-on_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-cmrra05/anat/sub-cmrra05_flip-1_mt-on_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Etienne Bergeron", - "Date": "2021-06-25 13:48:11" + "Date": "2021-06-25 13:48:11", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-cmrra05/anat/sub-cmrra05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-cmrra05/anat/sub-cmrra05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-cmrra05/anat/sub-cmrra05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-cmrra05/anat/sub-cmrra05_flip-2_mt-off_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-cmrra05/anat/sub-cmrra05_flip-2_mt-off_space-other_MTS_label-SC_seg.json index 84273acaed..9b411a0ce5 100644 --- a/derivatives/labels/sub-cmrra05/anat/sub-cmrra05_flip-2_mt-off_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-cmrra05/anat/sub-cmrra05_flip-2_mt-off_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Etienne Bergeron", - "Date": "2021-06-25 12:51:55" + "Date": "2021-06-25 12:51:55", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-cmrra05/anat/sub-cmrra05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-cmrra05/anat/sub-cmrra05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-cmrra05/anat/sub-cmrra05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-cmrra05/anat/sub-cmrra05_space-other_T1w_label-SC_seg.json b/derivatives/labels/sub-cmrra05/anat/sub-cmrra05_space-other_T1w_label-SC_seg.json index f206a689ff..f36094bc23 100644 --- a/derivatives/labels/sub-cmrra05/anat/sub-cmrra05_space-other_T1w_label-SC_seg.json +++ b/derivatives/labels/sub-cmrra05/anat/sub-cmrra05_space-other_T1w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Etienne Bergeron", - "Date": "2021-06-21 15:06:02" + "Date": "2021-06-21 15:06:02", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-cmrra05/anat/sub-cmrra05_space-other_T2star_label-SC_seg.json b/derivatives/labels/sub-cmrra05/anat/sub-cmrra05_space-other_T2star_label-SC_seg.json index bce58bab86..a59bd06cd9 100644 --- a/derivatives/labels/sub-cmrra05/anat/sub-cmrra05_space-other_T2star_label-SC_seg.json +++ b/derivatives/labels/sub-cmrra05/anat/sub-cmrra05_space-other_T2star_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:00" + "Date": "2021-06-08 15:06:00", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-cmrra05/anat/sub-cmrra05_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-cmrra05/anat/sub-cmrra05_space-other_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-cmrra05/anat/sub-cmrra05_space-other_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-cmrra05/anat/sub-cmrra05_space-other_T2w_label-SC_seg.json b/derivatives/labels/sub-cmrra05/anat/sub-cmrra05_space-other_T2w_label-SC_seg.json index 6b352d56f7..039b7b2e23 100644 --- a/derivatives/labels/sub-cmrra05/anat/sub-cmrra05_space-other_T2w_label-SC_seg.json +++ b/derivatives/labels/sub-cmrra05/anat/sub-cmrra05_space-other_T2w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Etienne Bergeron", - "Date": "2021-06-23 15:50:59" + "Date": "2021-06-23 15:50:59", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-cmrra05/dwi/sub-cmrra05_rec-average_dwi_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-cmrra05/dwi/sub-cmrra05_rec-average_dwi_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-cmrra05/dwi/sub-cmrra05_rec-average_dwi_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-cmrra06/anat/sub-cmrra06_flip-1_mt-on_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-cmrra06/anat/sub-cmrra06_flip-1_mt-on_space-other_MTS_label-SC_seg.json index bce58bab86..90e954201f 100644 --- a/derivatives/labels/sub-cmrra06/anat/sub-cmrra06_flip-1_mt-on_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-cmrra06/anat/sub-cmrra06_flip-1_mt-on_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:00" + "Date": "2021-06-08 15:06:00", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-cmrra06/anat/sub-cmrra06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-cmrra06/anat/sub-cmrra06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-cmrra06/anat/sub-cmrra06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-cmrra06/anat/sub-cmrra06_flip-2_mt-off_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-cmrra06/anat/sub-cmrra06_flip-2_mt-off_space-other_MTS_label-SC_seg.json index 972a8da796..3722ce0898 100644 --- a/derivatives/labels/sub-cmrra06/anat/sub-cmrra06_flip-2_mt-off_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-cmrra06/anat/sub-cmrra06_flip-2_mt-off_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Etienne Bergeron", - "Date": "2021-06-25 12:47:26" + "Date": "2021-06-25 12:47:26", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-cmrra06/anat/sub-cmrra06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-cmrra06/anat/sub-cmrra06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-cmrra06/anat/sub-cmrra06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-cmrra06/anat/sub-cmrra06_space-other_T1w_label-SC_seg.json b/derivatives/labels/sub-cmrra06/anat/sub-cmrra06_space-other_T1w_label-SC_seg.json index b3e2b03461..c0dc162aa7 100644 --- a/derivatives/labels/sub-cmrra06/anat/sub-cmrra06_space-other_T1w_label-SC_seg.json +++ b/derivatives/labels/sub-cmrra06/anat/sub-cmrra06_space-other_T1w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Etienne Bergeron", - "Date": "2021-06-21 15:01:57" + "Date": "2021-06-21 15:01:57", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-cmrra06/anat/sub-cmrra06_space-other_T2star_label-SC_seg.json b/derivatives/labels/sub-cmrra06/anat/sub-cmrra06_space-other_T2star_label-SC_seg.json index bce58bab86..a59bd06cd9 100644 --- a/derivatives/labels/sub-cmrra06/anat/sub-cmrra06_space-other_T2star_label-SC_seg.json +++ b/derivatives/labels/sub-cmrra06/anat/sub-cmrra06_space-other_T2star_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:00" + "Date": "2021-06-08 15:06:00", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-cmrra06/anat/sub-cmrra06_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-cmrra06/anat/sub-cmrra06_space-other_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-cmrra06/anat/sub-cmrra06_space-other_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-cmrra06/anat/sub-cmrra06_space-other_T2w_label-SC_seg.json b/derivatives/labels/sub-cmrra06/anat/sub-cmrra06_space-other_T2w_label-SC_seg.json index bce58bab86..af57be1388 100644 --- a/derivatives/labels/sub-cmrra06/anat/sub-cmrra06_space-other_T2w_label-SC_seg.json +++ b/derivatives/labels/sub-cmrra06/anat/sub-cmrra06_space-other_T2w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:00" + "Date": "2021-06-08 15:06:00", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-cmrra06/dwi/sub-cmrra06_rec-average_dwi_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-cmrra06/dwi/sub-cmrra06_rec-average_dwi_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-cmrra06/dwi/sub-cmrra06_rec-average_dwi_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-cmrrb01/anat/sub-cmrrb01_flip-1_mt-on_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-cmrrb01/anat/sub-cmrrb01_flip-1_mt-on_space-other_MTS_label-SC_seg.json index bce58bab86..90e954201f 100644 --- a/derivatives/labels/sub-cmrrb01/anat/sub-cmrrb01_flip-1_mt-on_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-cmrrb01/anat/sub-cmrrb01_flip-1_mt-on_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:00" + "Date": "2021-06-08 15:06:00", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-cmrrb01/anat/sub-cmrrb01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-cmrrb01/anat/sub-cmrrb01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-cmrrb01/anat/sub-cmrrb01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-cmrrb01/anat/sub-cmrrb01_flip-2_mt-off_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-cmrrb01/anat/sub-cmrrb01_flip-2_mt-off_space-other_MTS_label-SC_seg.json index d92bfa525e..c4c0f102e1 100644 --- a/derivatives/labels/sub-cmrrb01/anat/sub-cmrrb01_flip-2_mt-off_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-cmrrb01/anat/sub-cmrrb01_flip-2_mt-off_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Etienne Bergeron", - "Date": "2021-06-25 12:50:33" + "Date": "2021-06-25 12:50:33", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-cmrrb01/anat/sub-cmrrb01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-cmrrb01/anat/sub-cmrrb01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-cmrrb01/anat/sub-cmrrb01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-cmrrb01/anat/sub-cmrrb01_space-other_T1w_label-SC_seg.json b/derivatives/labels/sub-cmrrb01/anat/sub-cmrrb01_space-other_T1w_label-SC_seg.json index 4b5fabb11c..1ae7b8fa79 100644 --- a/derivatives/labels/sub-cmrrb01/anat/sub-cmrrb01_space-other_T1w_label-SC_seg.json +++ b/derivatives/labels/sub-cmrrb01/anat/sub-cmrrb01_space-other_T1w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Etienne Bergeron", - "Date": "2021-06-23 09:58:01" + "Date": "2021-06-23 09:58:01", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-cmrrb01/anat/sub-cmrrb01_space-other_T2star_label-SC_seg.json b/derivatives/labels/sub-cmrrb01/anat/sub-cmrrb01_space-other_T2star_label-SC_seg.json index 090bb0ce91..986ff55ab5 100644 --- a/derivatives/labels/sub-cmrrb01/anat/sub-cmrrb01_space-other_T2star_label-SC_seg.json +++ b/derivatives/labels/sub-cmrrb01/anat/sub-cmrrb01_space-other_T2star_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Etienne Bergeron", - "Date": "2021-06-25 13:58:50" + "Date": "2021-06-25 13:58:50", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-cmrrb01/anat/sub-cmrrb01_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-cmrrb01/anat/sub-cmrrb01_space-other_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-cmrrb01/anat/sub-cmrrb01_space-other_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-cmrrb01/anat/sub-cmrrb01_space-other_T2w_label-SC_seg.json b/derivatives/labels/sub-cmrrb01/anat/sub-cmrrb01_space-other_T2w_label-SC_seg.json index 92e0c44a44..db09bd5838 100644 --- a/derivatives/labels/sub-cmrrb01/anat/sub-cmrrb01_space-other_T2w_label-SC_seg.json +++ b/derivatives/labels/sub-cmrrb01/anat/sub-cmrrb01_space-other_T2w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Etienne Bergeron", - "Date": "2021-06-23 16:03:21" + "Date": "2021-06-23 16:03:21", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-cmrrb01/dwi/sub-cmrrb01_rec-average_dwi_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-cmrrb01/dwi/sub-cmrrb01_rec-average_dwi_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-cmrrb01/dwi/sub-cmrrb01_rec-average_dwi_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-cmrrb02/anat/sub-cmrrb02_flip-1_mt-on_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-cmrrb02/anat/sub-cmrrb02_flip-1_mt-on_space-other_MTS_label-SC_seg.json index bce58bab86..90e954201f 100644 --- a/derivatives/labels/sub-cmrrb02/anat/sub-cmrrb02_flip-1_mt-on_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-cmrrb02/anat/sub-cmrrb02_flip-1_mt-on_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:00" + "Date": "2021-06-08 15:06:00", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-cmrrb02/anat/sub-cmrrb02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-cmrrb02/anat/sub-cmrrb02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-cmrrb02/anat/sub-cmrrb02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-cmrrb02/anat/sub-cmrrb02_flip-2_mt-off_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-cmrrb02/anat/sub-cmrrb02_flip-2_mt-off_space-other_MTS_label-SC_seg.json index b43014d2d6..c2f6558dae 100644 --- a/derivatives/labels/sub-cmrrb02/anat/sub-cmrrb02_flip-2_mt-off_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-cmrrb02/anat/sub-cmrrb02_flip-2_mt-off_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Etienne Bergeron", - "Date": "2021-06-25 13:33:47" + "Date": "2021-06-25 13:33:47", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-cmrrb02/anat/sub-cmrrb02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-cmrrb02/anat/sub-cmrrb02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-cmrrb02/anat/sub-cmrrb02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-cmrrb02/anat/sub-cmrrb02_space-other_T1w_label-SC_seg.json b/derivatives/labels/sub-cmrrb02/anat/sub-cmrrb02_space-other_T1w_label-SC_seg.json index d89ee119eb..66fc624a33 100644 --- a/derivatives/labels/sub-cmrrb02/anat/sub-cmrrb02_space-other_T1w_label-SC_seg.json +++ b/derivatives/labels/sub-cmrrb02/anat/sub-cmrrb02_space-other_T1w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Etienne Bergeron", - "Date": "2021-06-23 10:11:01" + "Date": "2021-06-23 10:11:01", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-cmrrb02/anat/sub-cmrrb02_space-other_T2star_label-SC_seg.json b/derivatives/labels/sub-cmrrb02/anat/sub-cmrrb02_space-other_T2star_label-SC_seg.json index bce58bab86..a59bd06cd9 100644 --- a/derivatives/labels/sub-cmrrb02/anat/sub-cmrrb02_space-other_T2star_label-SC_seg.json +++ b/derivatives/labels/sub-cmrrb02/anat/sub-cmrrb02_space-other_T2star_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:00" + "Date": "2021-06-08 15:06:00", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-cmrrb02/anat/sub-cmrrb02_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-cmrrb02/anat/sub-cmrrb02_space-other_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-cmrrb02/anat/sub-cmrrb02_space-other_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-cmrrb02/anat/sub-cmrrb02_space-other_T2w_label-SC_seg.json b/derivatives/labels/sub-cmrrb02/anat/sub-cmrrb02_space-other_T2w_label-SC_seg.json index ca16fd0e68..9a5de18bea 100644 --- a/derivatives/labels/sub-cmrrb02/anat/sub-cmrrb02_space-other_T2w_label-SC_seg.json +++ b/derivatives/labels/sub-cmrrb02/anat/sub-cmrrb02_space-other_T2w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Etienne Bergeron", - "Date": "2021-06-25 12:38:38" + "Date": "2021-06-25 12:38:38", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-cmrrb02/dwi/sub-cmrrb02_rec-average_dwi_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-cmrrb02/dwi/sub-cmrrb02_rec-average_dwi_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-cmrrb02/dwi/sub-cmrrb02_rec-average_dwi_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-cmrrb03/anat/sub-cmrrb03_flip-1_mt-on_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-cmrrb03/anat/sub-cmrrb03_flip-1_mt-on_space-other_MTS_label-SC_seg.json index bce58bab86..90e954201f 100644 --- a/derivatives/labels/sub-cmrrb03/anat/sub-cmrrb03_flip-1_mt-on_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-cmrrb03/anat/sub-cmrrb03_flip-1_mt-on_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:00" + "Date": "2021-06-08 15:06:00", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-cmrrb03/anat/sub-cmrrb03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-cmrrb03/anat/sub-cmrrb03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-cmrrb03/anat/sub-cmrrb03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-cmrrb03/anat/sub-cmrrb03_flip-2_mt-off_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-cmrrb03/anat/sub-cmrrb03_flip-2_mt-off_space-other_MTS_label-SC_seg.json index bf9e38230e..5113a42475 100644 --- a/derivatives/labels/sub-cmrrb03/anat/sub-cmrrb03_flip-2_mt-off_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-cmrrb03/anat/sub-cmrrb03_flip-2_mt-off_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-05 15:50:34" + "Date": "2022-10-05 15:50:34", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-cmrrb03/anat/sub-cmrrb03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-cmrrb03/anat/sub-cmrrb03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-cmrrb03/anat/sub-cmrrb03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-cmrrb03/anat/sub-cmrrb03_space-other_T1w_label-SC_seg.json b/derivatives/labels/sub-cmrrb03/anat/sub-cmrrb03_space-other_T1w_label-SC_seg.json index 4bcfbfd3fc..89a6464594 100644 --- a/derivatives/labels/sub-cmrrb03/anat/sub-cmrrb03_space-other_T1w_label-SC_seg.json +++ b/derivatives/labels/sub-cmrrb03/anat/sub-cmrrb03_space-other_T1w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Etienne Bergeron", - "Date": "2021-06-21 14:58:29" + "Date": "2021-06-21 14:58:29", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-cmrrb03/anat/sub-cmrrb03_space-other_T2star_label-SC_seg.json b/derivatives/labels/sub-cmrrb03/anat/sub-cmrrb03_space-other_T2star_label-SC_seg.json index bce58bab86..a59bd06cd9 100644 --- a/derivatives/labels/sub-cmrrb03/anat/sub-cmrrb03_space-other_T2star_label-SC_seg.json +++ b/derivatives/labels/sub-cmrrb03/anat/sub-cmrrb03_space-other_T2star_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:00" + "Date": "2021-06-08 15:06:00", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-cmrrb03/anat/sub-cmrrb03_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-cmrrb03/anat/sub-cmrrb03_space-other_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-cmrrb03/anat/sub-cmrrb03_space-other_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-cmrrb03/anat/sub-cmrrb03_space-other_T2w_csflabel-SC_seg.json b/derivatives/labels/sub-cmrrb03/anat/sub-cmrrb03_space-other_T2w_csflabel-SC_seg.json index 5d72cb8aaa..2edede9801 100644 --- a/derivatives/labels/sub-cmrrb03/anat/sub-cmrrb03_space-other_T2w_csflabel-SC_seg.json +++ b/derivatives/labels/sub-cmrrb03/anat/sub-cmrrb03_space-other_T2w_csflabel-SC_seg.json @@ -1,3 +1,7 @@ { - "author": "Charley Gros" -} + "author": "Charley Gros", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/labels/sub-cmrrb03/anat/sub-cmrrb03_space-other_T2w_label-SC_seg.json b/derivatives/labels/sub-cmrrb03/anat/sub-cmrrb03_space-other_T2w_label-SC_seg.json index eec83b049f..29bb004550 100644 --- a/derivatives/labels/sub-cmrrb03/anat/sub-cmrrb03_space-other_T2w_label-SC_seg.json +++ b/derivatives/labels/sub-cmrrb03/anat/sub-cmrrb03_space-other_T2w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Etienne Bergeron", - "Date": "2021-06-23 16:09:20" + "Date": "2021-06-23 16:09:20", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-cmrrb03/dwi/sub-cmrrb03_rec-average_dwi_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-cmrrb03/dwi/sub-cmrrb03_rec-average_dwi_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-cmrrb03/dwi/sub-cmrrb03_rec-average_dwi_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-cmrrb04/anat/sub-cmrrb04_flip-1_mt-on_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-cmrrb04/anat/sub-cmrrb04_flip-1_mt-on_space-other_MTS_label-SC_seg.json index bce58bab86..90e954201f 100644 --- a/derivatives/labels/sub-cmrrb04/anat/sub-cmrrb04_flip-1_mt-on_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-cmrrb04/anat/sub-cmrrb04_flip-1_mt-on_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:00" + "Date": "2021-06-08 15:06:00", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-cmrrb04/anat/sub-cmrrb04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-cmrrb04/anat/sub-cmrrb04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-cmrrb04/anat/sub-cmrrb04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-cmrrb04/anat/sub-cmrrb04_flip-2_mt-off_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-cmrrb04/anat/sub-cmrrb04_flip-2_mt-off_space-other_MTS_label-SC_seg.json index 07e18f60d7..780da39206 100644 --- a/derivatives/labels/sub-cmrrb04/anat/sub-cmrrb04_flip-2_mt-off_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-cmrrb04/anat/sub-cmrrb04_flip-2_mt-off_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Etienne Bergeron", - "Date": "2021-06-25 13:31:48" + "Date": "2021-06-25 13:31:48", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-cmrrb04/anat/sub-cmrrb04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-cmrrb04/anat/sub-cmrrb04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-cmrrb04/anat/sub-cmrrb04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-cmrrb04/anat/sub-cmrrb04_space-other_T1w_label-SC_seg.json b/derivatives/labels/sub-cmrrb04/anat/sub-cmrrb04_space-other_T1w_label-SC_seg.json index 3393e4cc4e..a80cc9e72a 100644 --- a/derivatives/labels/sub-cmrrb04/anat/sub-cmrrb04_space-other_T1w_label-SC_seg.json +++ b/derivatives/labels/sub-cmrrb04/anat/sub-cmrrb04_space-other_T1w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-05 15:58:49" + "Date": "2022-10-05 15:58:49", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-cmrrb04/anat/sub-cmrrb04_space-other_T2star_label-SC_seg.json b/derivatives/labels/sub-cmrrb04/anat/sub-cmrrb04_space-other_T2star_label-SC_seg.json index bce58bab86..a59bd06cd9 100644 --- a/derivatives/labels/sub-cmrrb04/anat/sub-cmrrb04_space-other_T2star_label-SC_seg.json +++ b/derivatives/labels/sub-cmrrb04/anat/sub-cmrrb04_space-other_T2star_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:00" + "Date": "2021-06-08 15:06:00", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-cmrrb04/anat/sub-cmrrb04_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-cmrrb04/anat/sub-cmrrb04_space-other_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-cmrrb04/anat/sub-cmrrb04_space-other_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-cmrrb04/anat/sub-cmrrb04_space-other_T2w_label-SC_seg.json b/derivatives/labels/sub-cmrrb04/anat/sub-cmrrb04_space-other_T2w_label-SC_seg.json index 6a1589f1c0..8f0f7039de 100644 --- a/derivatives/labels/sub-cmrrb04/anat/sub-cmrrb04_space-other_T2w_label-SC_seg.json +++ b/derivatives/labels/sub-cmrrb04/anat/sub-cmrrb04_space-other_T2w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Etienne Bergeron", - "Date": "2021-06-25 11:13:59" + "Date": "2021-06-25 11:13:59", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-cmrrb04/dwi/sub-cmrrb04_rec-average_dwi_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-cmrrb04/dwi/sub-cmrrb04_rec-average_dwi_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-cmrrb04/dwi/sub-cmrrb04_rec-average_dwi_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-cmrrb05/anat/sub-cmrrb05_flip-1_mt-on_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-cmrrb05/anat/sub-cmrrb05_flip-1_mt-on_space-other_MTS_label-SC_seg.json index fc3776ccf3..5555f5481c 100644 --- a/derivatives/labels/sub-cmrrb05/anat/sub-cmrrb05_flip-1_mt-on_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-cmrrb05/anat/sub-cmrrb05_flip-1_mt-on_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Etienne Bergeron", - "Date": "2021-06-26 14:51:00" + "Date": "2021-06-26 14:51:00", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-cmrrb05/anat/sub-cmrrb05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-cmrrb05/anat/sub-cmrrb05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-cmrrb05/anat/sub-cmrrb05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-cmrrb05/anat/sub-cmrrb05_flip-2_mt-off_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-cmrrb05/anat/sub-cmrrb05_flip-2_mt-off_space-other_MTS_label-SC_seg.json index bce58bab86..90e954201f 100644 --- a/derivatives/labels/sub-cmrrb05/anat/sub-cmrrb05_flip-2_mt-off_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-cmrrb05/anat/sub-cmrrb05_flip-2_mt-off_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:00" + "Date": "2021-06-08 15:06:00", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-cmrrb05/anat/sub-cmrrb05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-cmrrb05/anat/sub-cmrrb05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-cmrrb05/anat/sub-cmrrb05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-cmrrb05/anat/sub-cmrrb05_space-other_T1w_label-SC_seg.json b/derivatives/labels/sub-cmrrb05/anat/sub-cmrrb05_space-other_T1w_label-SC_seg.json index 0729725509..fc78ac2e79 100644 --- a/derivatives/labels/sub-cmrrb05/anat/sub-cmrrb05_space-other_T1w_label-SC_seg.json +++ b/derivatives/labels/sub-cmrrb05/anat/sub-cmrrb05_space-other_T1w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-05 16:38:25" + "Date": "2022-10-05 16:38:25", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-cmrrb05/anat/sub-cmrrb05_space-other_T2star_label-SC_seg.json b/derivatives/labels/sub-cmrrb05/anat/sub-cmrrb05_space-other_T2star_label-SC_seg.json index bce58bab86..a59bd06cd9 100644 --- a/derivatives/labels/sub-cmrrb05/anat/sub-cmrrb05_space-other_T2star_label-SC_seg.json +++ b/derivatives/labels/sub-cmrrb05/anat/sub-cmrrb05_space-other_T2star_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:00" + "Date": "2021-06-08 15:06:00", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-cmrrb05/anat/sub-cmrrb05_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-cmrrb05/anat/sub-cmrrb05_space-other_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-cmrrb05/anat/sub-cmrrb05_space-other_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-cmrrb05/anat/sub-cmrrb05_space-other_T2w_label-SC_seg.json b/derivatives/labels/sub-cmrrb05/anat/sub-cmrrb05_space-other_T2w_label-SC_seg.json index bce58bab86..af57be1388 100644 --- a/derivatives/labels/sub-cmrrb05/anat/sub-cmrrb05_space-other_T2w_label-SC_seg.json +++ b/derivatives/labels/sub-cmrrb05/anat/sub-cmrrb05_space-other_T2w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:00" + "Date": "2021-06-08 15:06:00", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-cmrrb05/dwi/sub-cmrrb05_rec-average_dwi_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-cmrrb05/dwi/sub-cmrrb05_rec-average_dwi_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-cmrrb05/dwi/sub-cmrrb05_rec-average_dwi_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-cmrrb06/anat/sub-cmrrb06_flip-1_mt-on_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-cmrrb06/anat/sub-cmrrb06_flip-1_mt-on_space-other_MTS_label-SC_seg.json index c6d6307db1..ae33bc9208 100644 --- a/derivatives/labels/sub-cmrrb06/anat/sub-cmrrb06_flip-1_mt-on_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-cmrrb06/anat/sub-cmrrb06_flip-1_mt-on_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Etienne Bergeron", - "Date": "2021-06-28 10:00:42" + "Date": "2021-06-28 10:00:42", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-cmrrb06/anat/sub-cmrrb06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-cmrrb06/anat/sub-cmrrb06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-cmrrb06/anat/sub-cmrrb06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-cmrrb06/anat/sub-cmrrb06_flip-2_mt-off_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-cmrrb06/anat/sub-cmrrb06_flip-2_mt-off_space-other_MTS_label-SC_seg.json index f219214e7e..b90e9135ab 100644 --- a/derivatives/labels/sub-cmrrb06/anat/sub-cmrrb06_flip-2_mt-off_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-cmrrb06/anat/sub-cmrrb06_flip-2_mt-off_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:01" + "Date": "2021-06-08 15:06:01", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-cmrrb06/anat/sub-cmrrb06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-cmrrb06/anat/sub-cmrrb06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-cmrrb06/anat/sub-cmrrb06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-cmrrb06/anat/sub-cmrrb06_space-other_T1w_label-SC_seg.json b/derivatives/labels/sub-cmrrb06/anat/sub-cmrrb06_space-other_T1w_label-SC_seg.json index b250abe12e..582a67e1a3 100644 --- a/derivatives/labels/sub-cmrrb06/anat/sub-cmrrb06_space-other_T1w_label-SC_seg.json +++ b/derivatives/labels/sub-cmrrb06/anat/sub-cmrrb06_space-other_T1w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Etienne Bergeron", - "Date": "2021-06-25 15:28:29" + "Date": "2021-06-25 15:28:29", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-cmrrb06/anat/sub-cmrrb06_space-other_T2star_label-SC_seg.json b/derivatives/labels/sub-cmrrb06/anat/sub-cmrrb06_space-other_T2star_label-SC_seg.json index 6bbf39f50f..db62b3fa22 100644 --- a/derivatives/labels/sub-cmrrb06/anat/sub-cmrrb06_space-other_T2star_label-SC_seg.json +++ b/derivatives/labels/sub-cmrrb06/anat/sub-cmrrb06_space-other_T2star_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Etienne Bergeron", - "Date": "2021-06-28 14:56:27" + "Date": "2021-06-28 14:56:27", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-cmrrb06/anat/sub-cmrrb06_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-cmrrb06/anat/sub-cmrrb06_space-other_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-cmrrb06/anat/sub-cmrrb06_space-other_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-cmrrb06/anat/sub-cmrrb06_space-other_T2w_label-SC_seg.json b/derivatives/labels/sub-cmrrb06/anat/sub-cmrrb06_space-other_T2w_label-SC_seg.json index 168000dc56..48192a2514 100644 --- a/derivatives/labels/sub-cmrrb06/anat/sub-cmrrb06_space-other_T2w_label-SC_seg.json +++ b/derivatives/labels/sub-cmrrb06/anat/sub-cmrrb06_space-other_T2w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Etienne Bergeron", - "Date": "2021-06-26 15:09:06" + "Date": "2021-06-26 15:09:06", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-cmrrb06/dwi/sub-cmrrb06_rec-average_dwi_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-cmrrb06/dwi/sub-cmrrb06_rec-average_dwi_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-cmrrb06/dwi/sub-cmrrb06_rec-average_dwi_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-cmrrb07/anat/sub-cmrrb07_flip-1_mt-on_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-cmrrb07/anat/sub-cmrrb07_flip-1_mt-on_space-other_MTS_label-SC_seg.json index f219214e7e..b90e9135ab 100644 --- a/derivatives/labels/sub-cmrrb07/anat/sub-cmrrb07_flip-1_mt-on_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-cmrrb07/anat/sub-cmrrb07_flip-1_mt-on_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:01" + "Date": "2021-06-08 15:06:01", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-cmrrb07/anat/sub-cmrrb07_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-cmrrb07/anat/sub-cmrrb07_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-cmrrb07/anat/sub-cmrrb07_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-cmrrb07/anat/sub-cmrrb07_flip-2_mt-off_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-cmrrb07/anat/sub-cmrrb07_flip-2_mt-off_space-other_MTS_label-SC_seg.json index 3d1139d274..a62de7b2fa 100644 --- a/derivatives/labels/sub-cmrrb07/anat/sub-cmrrb07_flip-2_mt-off_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-cmrrb07/anat/sub-cmrrb07_flip-2_mt-off_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Etienne Bergeron", - "Date": "2021-06-26 15:23:05" + "Date": "2021-06-26 15:23:05", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-cmrrb07/anat/sub-cmrrb07_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-cmrrb07/anat/sub-cmrrb07_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-cmrrb07/anat/sub-cmrrb07_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-cmrrb07/anat/sub-cmrrb07_space-other_T1w_label-SC_seg.json b/derivatives/labels/sub-cmrrb07/anat/sub-cmrrb07_space-other_T1w_label-SC_seg.json index 34fe585fdb..7fbdc2807a 100644 --- a/derivatives/labels/sub-cmrrb07/anat/sub-cmrrb07_space-other_T1w_label-SC_seg.json +++ b/derivatives/labels/sub-cmrrb07/anat/sub-cmrrb07_space-other_T1w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Etienne Bergeron", - "Date": "2021-06-25 15:49:01" + "Date": "2021-06-25 15:49:01", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-cmrrb07/anat/sub-cmrrb07_space-other_T2star_label-SC_seg.json b/derivatives/labels/sub-cmrrb07/anat/sub-cmrrb07_space-other_T2star_label-SC_seg.json index a220192cf8..43632afeaf 100644 --- a/derivatives/labels/sub-cmrrb07/anat/sub-cmrrb07_space-other_T2star_label-SC_seg.json +++ b/derivatives/labels/sub-cmrrb07/anat/sub-cmrrb07_space-other_T2star_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Etienne Bergeron", - "Date": "2021-06-28 15:07:14" + "Date": "2021-06-28 15:07:14", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-cmrrb07/anat/sub-cmrrb07_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-cmrrb07/anat/sub-cmrrb07_space-other_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-cmrrb07/anat/sub-cmrrb07_space-other_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-cmrrb07/anat/sub-cmrrb07_space-other_T2w_label-SC_seg.json b/derivatives/labels/sub-cmrrb07/anat/sub-cmrrb07_space-other_T2w_label-SC_seg.json index 04c564ac3a..db12e6c12a 100644 --- a/derivatives/labels/sub-cmrrb07/anat/sub-cmrrb07_space-other_T2w_label-SC_seg.json +++ b/derivatives/labels/sub-cmrrb07/anat/sub-cmrrb07_space-other_T2w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Etienne Bergeron", - "Date": "2021-06-26 15:12:01" + "Date": "2021-06-26 15:12:01", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-cmrrb07/dwi/sub-cmrrb07_rec-average_dwi_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-cmrrb07/dwi/sub-cmrrb07_rec-average_dwi_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-cmrrb07/dwi/sub-cmrrb07_rec-average_dwi_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-dresden01/anat/sub-dresden01_flip-1_mt-on_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-dresden01/anat/sub-dresden01_flip-1_mt-on_space-other_MTS_label-SC_seg.json index f219214e7e..b90e9135ab 100644 --- a/derivatives/labels/sub-dresden01/anat/sub-dresden01_flip-1_mt-on_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-dresden01/anat/sub-dresden01_flip-1_mt-on_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:01" + "Date": "2021-06-08 15:06:01", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-dresden01/anat/sub-dresden01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-dresden01/anat/sub-dresden01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-dresden01/anat/sub-dresden01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-dresden01/anat/sub-dresden01_flip-2_mt-off_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-dresden01/anat/sub-dresden01_flip-2_mt-off_space-other_MTS_label-SC_seg.json index d66137622e..2f38777d8a 100644 --- a/derivatives/labels/sub-dresden01/anat/sub-dresden01_flip-2_mt-off_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-dresden01/anat/sub-dresden01_flip-2_mt-off_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Etienne Bergeron", - "Date": "2021-06-26 15:25:15" + "Date": "2021-06-26 15:25:15", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-dresden01/anat/sub-dresden01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-dresden01/anat/sub-dresden01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-dresden01/anat/sub-dresden01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-dresden01/anat/sub-dresden01_space-other_T1w_label-SC_seg.json b/derivatives/labels/sub-dresden01/anat/sub-dresden01_space-other_T1w_label-SC_seg.json index 5a1209ceb2..4d13de70b7 100644 --- a/derivatives/labels/sub-dresden01/anat/sub-dresden01_space-other_T1w_label-SC_seg.json +++ b/derivatives/labels/sub-dresden01/anat/sub-dresden01_space-other_T1w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Etienne Bergeron", - "Date": "2021-06-25 15:31:17" + "Date": "2021-06-25 15:31:17", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-dresden01/anat/sub-dresden01_space-other_T2star_label-SC_seg.json b/derivatives/labels/sub-dresden01/anat/sub-dresden01_space-other_T2star_label-SC_seg.json index 5a0e3bbf9e..713bca8af8 100644 --- a/derivatives/labels/sub-dresden01/anat/sub-dresden01_space-other_T2star_label-SC_seg.json +++ b/derivatives/labels/sub-dresden01/anat/sub-dresden01_space-other_T2star_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Etienne Bergeron", - "Date": "2021-06-28 15:20:55" + "Date": "2021-06-28 15:20:55", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-dresden01/anat/sub-dresden01_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-dresden01/anat/sub-dresden01_space-other_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-dresden01/anat/sub-dresden01_space-other_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-dresden01/anat/sub-dresden01_space-other_T2w_label-SC_seg.json b/derivatives/labels/sub-dresden01/anat/sub-dresden01_space-other_T2w_label-SC_seg.json index 038d12be5c..387451d4d5 100644 --- a/derivatives/labels/sub-dresden01/anat/sub-dresden01_space-other_T2w_label-SC_seg.json +++ b/derivatives/labels/sub-dresden01/anat/sub-dresden01_space-other_T2w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Etienne Bergeron", - "Date": "2021-06-26 15:15:10" + "Date": "2021-06-26 15:15:10", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-dresden01/dwi/sub-dresden01_rec-average_dwi_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-dresden01/dwi/sub-dresden01_rec-average_dwi_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-dresden01/dwi/sub-dresden01_rec-average_dwi_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-dresden02/anat/sub-dresden02_flip-1_mt-on_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-dresden02/anat/sub-dresden02_flip-1_mt-on_space-other_MTS_label-SC_seg.json index f219214e7e..b90e9135ab 100644 --- a/derivatives/labels/sub-dresden02/anat/sub-dresden02_flip-1_mt-on_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-dresden02/anat/sub-dresden02_flip-1_mt-on_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:01" + "Date": "2021-06-08 15:06:01", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-dresden02/anat/sub-dresden02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-dresden02/anat/sub-dresden02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-dresden02/anat/sub-dresden02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-dresden02/anat/sub-dresden02_flip-2_mt-off_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-dresden02/anat/sub-dresden02_flip-2_mt-off_space-other_MTS_label-SC_seg.json index ce313311b1..5466a8f5e0 100644 --- a/derivatives/labels/sub-dresden02/anat/sub-dresden02_flip-2_mt-off_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-dresden02/anat/sub-dresden02_flip-2_mt-off_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-05 16:41:40" + "Date": "2022-10-05 16:41:40", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-dresden02/anat/sub-dresden02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-dresden02/anat/sub-dresden02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-dresden02/anat/sub-dresden02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-dresden02/anat/sub-dresden02_space-other_T1w_label-SC_seg.json b/derivatives/labels/sub-dresden02/anat/sub-dresden02_space-other_T1w_label-SC_seg.json index 001ed8d81a..390469161a 100644 --- a/derivatives/labels/sub-dresden02/anat/sub-dresden02_space-other_T1w_label-SC_seg.json +++ b/derivatives/labels/sub-dresden02/anat/sub-dresden02_space-other_T1w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Etienne Bergeron", - "Date": "2021-06-25 15:50:21" + "Date": "2021-06-25 15:50:21", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-dresden02/anat/sub-dresden02_space-other_T2star_label-SC_seg.json b/derivatives/labels/sub-dresden02/anat/sub-dresden02_space-other_T2star_label-SC_seg.json index 853c832f14..77df5320a0 100644 --- a/derivatives/labels/sub-dresden02/anat/sub-dresden02_space-other_T2star_label-SC_seg.json +++ b/derivatives/labels/sub-dresden02/anat/sub-dresden02_space-other_T2star_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Etienne Bergeron", - "Date": "2021-06-28 15:28:58" + "Date": "2021-06-28 15:28:58", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-dresden02/anat/sub-dresden02_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-dresden02/anat/sub-dresden02_space-other_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-dresden02/anat/sub-dresden02_space-other_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-dresden02/anat/sub-dresden02_space-other_T2w_label-SC_seg.json b/derivatives/labels/sub-dresden02/anat/sub-dresden02_space-other_T2w_label-SC_seg.json index 1f7cce7b30..01483952b7 100644 --- a/derivatives/labels/sub-dresden02/anat/sub-dresden02_space-other_T2w_label-SC_seg.json +++ b/derivatives/labels/sub-dresden02/anat/sub-dresden02_space-other_T2w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Etienne Bergeron", - "Date": "2021-06-26 15:17:33" + "Date": "2021-06-26 15:17:33", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-dresden02/dwi/sub-dresden02_rec-average_dwi_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-dresden02/dwi/sub-dresden02_rec-average_dwi_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-dresden02/dwi/sub-dresden02_rec-average_dwi_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-fslAchieva01/anat/sub-fslAchieva01_flip-1_mt-on_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-fslAchieva01/anat/sub-fslAchieva01_flip-1_mt-on_space-other_MTS_label-SC_seg.json index 9bfe6ada83..3029266c02 100644 --- a/derivatives/labels/sub-fslAchieva01/anat/sub-fslAchieva01_flip-1_mt-on_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-fslAchieva01/anat/sub-fslAchieva01_flip-1_mt-on_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Etienne Bergeron", - "Date": "2021-06-28 13:24:39" + "Date": "2021-06-28 13:24:39", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-fslAchieva01/anat/sub-fslAchieva01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-fslAchieva01/anat/sub-fslAchieva01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-fslAchieva01/anat/sub-fslAchieva01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-fslAchieva01/anat/sub-fslAchieva01_flip-2_mt-off_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-fslAchieva01/anat/sub-fslAchieva01_flip-2_mt-off_space-other_MTS_label-SC_seg.json index c8cdb689e8..3bf63cddf2 100644 --- a/derivatives/labels/sub-fslAchieva01/anat/sub-fslAchieva01_flip-2_mt-off_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-fslAchieva01/anat/sub-fslAchieva01_flip-2_mt-off_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-08-04 11:43:54" + "Date": "2021-08-04 11:43:54", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-fslAchieva01/anat/sub-fslAchieva01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-fslAchieva01/anat/sub-fslAchieva01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-fslAchieva01/anat/sub-fslAchieva01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-fslAchieva01/anat/sub-fslAchieva01_space-other_T1w_label-SC_seg.json b/derivatives/labels/sub-fslAchieva01/anat/sub-fslAchieva01_space-other_T1w_label-SC_seg.json index 72a85e2a37..5c33b51d03 100644 --- a/derivatives/labels/sub-fslAchieva01/anat/sub-fslAchieva01_space-other_T1w_label-SC_seg.json +++ b/derivatives/labels/sub-fslAchieva01/anat/sub-fslAchieva01_space-other_T1w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Etienne Bergeron", - "Date": "2021-06-25 15:53:56" + "Date": "2021-06-25 15:53:56", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-fslAchieva01/anat/sub-fslAchieva01_space-other_T2star_gmlabel-SC_seg.json b/derivatives/labels/sub-fslAchieva01/anat/sub-fslAchieva01_space-other_T2star_gmlabel-SC_seg.json index 552b87d198..9b23e58c0e 100644 --- a/derivatives/labels/sub-fslAchieva01/anat/sub-fslAchieva01_space-other_T2star_gmlabel-SC_seg.json +++ b/derivatives/labels/sub-fslAchieva01/anat/sub-fslAchieva01_space-other_T2star_gmlabel-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-03 10:35:15" + "Date": "2021-06-03 10:35:15", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-fslAchieva01/anat/sub-fslAchieva01_space-other_T2star_label-SC_seg.json b/derivatives/labels/sub-fslAchieva01/anat/sub-fslAchieva01_space-other_T2star_label-SC_seg.json index f219214e7e..7b12b39e9b 100644 --- a/derivatives/labels/sub-fslAchieva01/anat/sub-fslAchieva01_space-other_T2star_label-SC_seg.json +++ b/derivatives/labels/sub-fslAchieva01/anat/sub-fslAchieva01_space-other_T2star_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:01" + "Date": "2021-06-08 15:06:01", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-fslAchieva01/anat/sub-fslAchieva01_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-fslAchieva01/anat/sub-fslAchieva01_space-other_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-fslAchieva01/anat/sub-fslAchieva01_space-other_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-fslAchieva01/anat/sub-fslAchieva01_space-other_T2w_label-SC_seg.json b/derivatives/labels/sub-fslAchieva01/anat/sub-fslAchieva01_space-other_T2w_label-SC_seg.json index 1b85968352..6c32e17271 100644 --- a/derivatives/labels/sub-fslAchieva01/anat/sub-fslAchieva01_space-other_T2w_label-SC_seg.json +++ b/derivatives/labels/sub-fslAchieva01/anat/sub-fslAchieva01_space-other_T2w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Etienne Bergeron", - "Date": "2021-06-26 15:21:13" + "Date": "2021-06-26 15:21:13", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-fslAchieva01/dwi/sub-fslAchieva01_rec-average_dwi_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-fslAchieva01/dwi/sub-fslAchieva01_rec-average_dwi_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-fslAchieva01/dwi/sub-fslAchieva01_rec-average_dwi_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-fslAchieva02/anat/sub-fslAchieva02_flip-1_mt-on_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-fslAchieva02/anat/sub-fslAchieva02_flip-1_mt-on_space-other_MTS_label-SC_seg.json index f219214e7e..b90e9135ab 100644 --- a/derivatives/labels/sub-fslAchieva02/anat/sub-fslAchieva02_flip-1_mt-on_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-fslAchieva02/anat/sub-fslAchieva02_flip-1_mt-on_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:01" + "Date": "2021-06-08 15:06:01", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-fslAchieva02/anat/sub-fslAchieva02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-fslAchieva02/anat/sub-fslAchieva02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-fslAchieva02/anat/sub-fslAchieva02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-fslAchieva02/anat/sub-fslAchieva02_flip-2_mt-off_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-fslAchieva02/anat/sub-fslAchieva02_flip-2_mt-off_space-other_MTS_label-SC_seg.json index f219214e7e..b90e9135ab 100644 --- a/derivatives/labels/sub-fslAchieva02/anat/sub-fslAchieva02_flip-2_mt-off_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-fslAchieva02/anat/sub-fslAchieva02_flip-2_mt-off_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:01" + "Date": "2021-06-08 15:06:01", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-fslAchieva02/anat/sub-fslAchieva02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-fslAchieva02/anat/sub-fslAchieva02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-fslAchieva02/anat/sub-fslAchieva02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-fslAchieva02/anat/sub-fslAchieva02_space-other_T1w_label-SC_seg.json b/derivatives/labels/sub-fslAchieva02/anat/sub-fslAchieva02_space-other_T1w_label-SC_seg.json index f219214e7e..18e0646657 100644 --- a/derivatives/labels/sub-fslAchieva02/anat/sub-fslAchieva02_space-other_T1w_label-SC_seg.json +++ b/derivatives/labels/sub-fslAchieva02/anat/sub-fslAchieva02_space-other_T1w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:01" + "Date": "2021-06-08 15:06:01", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-fslAchieva02/anat/sub-fslAchieva02_space-other_T2star_label-SC_seg.json b/derivatives/labels/sub-fslAchieva02/anat/sub-fslAchieva02_space-other_T2star_label-SC_seg.json index f219214e7e..7b12b39e9b 100644 --- a/derivatives/labels/sub-fslAchieva02/anat/sub-fslAchieva02_space-other_T2star_label-SC_seg.json +++ b/derivatives/labels/sub-fslAchieva02/anat/sub-fslAchieva02_space-other_T2star_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:01" + "Date": "2021-06-08 15:06:01", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-fslAchieva02/anat/sub-fslAchieva02_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-fslAchieva02/anat/sub-fslAchieva02_space-other_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-fslAchieva02/anat/sub-fslAchieva02_space-other_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-fslAchieva02/anat/sub-fslAchieva02_space-other_T2w_label-SC_seg.json b/derivatives/labels/sub-fslAchieva02/anat/sub-fslAchieva02_space-other_T2w_label-SC_seg.json index 723a0de63d..ad5840b025 100644 --- a/derivatives/labels/sub-fslAchieva02/anat/sub-fslAchieva02_space-other_T2w_label-SC_seg.json +++ b/derivatives/labels/sub-fslAchieva02/anat/sub-fslAchieva02_space-other_T2w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Etienne Bergeron", - "Date": "2021-06-28 15:39:58" + "Date": "2021-06-28 15:39:58", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-fslAchieva02/dwi/sub-fslAchieva02_rec-average_dwi_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-fslAchieva02/dwi/sub-fslAchieva02_rec-average_dwi_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-fslAchieva02/dwi/sub-fslAchieva02_rec-average_dwi_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-fslAchieva03/anat/sub-fslAchieva03_flip-1_mt-on_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-fslAchieva03/anat/sub-fslAchieva03_flip-1_mt-on_space-other_MTS_label-SC_seg.json index f219214e7e..b90e9135ab 100644 --- a/derivatives/labels/sub-fslAchieva03/anat/sub-fslAchieva03_flip-1_mt-on_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-fslAchieva03/anat/sub-fslAchieva03_flip-1_mt-on_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:01" + "Date": "2021-06-08 15:06:01", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-fslAchieva03/anat/sub-fslAchieva03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-fslAchieva03/anat/sub-fslAchieva03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-fslAchieva03/anat/sub-fslAchieva03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-fslAchieva03/anat/sub-fslAchieva03_flip-2_mt-off_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-fslAchieva03/anat/sub-fslAchieva03_flip-2_mt-off_space-other_MTS_label-SC_seg.json index 76d57a5e38..a6bb1504a6 100644 --- a/derivatives/labels/sub-fslAchieva03/anat/sub-fslAchieva03_flip-2_mt-off_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-fslAchieva03/anat/sub-fslAchieva03_flip-2_mt-off_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-05 16:50:05" + "Date": "2022-10-05 16:50:05", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-fslAchieva03/anat/sub-fslAchieva03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-fslAchieva03/anat/sub-fslAchieva03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-fslAchieva03/anat/sub-fslAchieva03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-fslAchieva03/anat/sub-fslAchieva03_space-other_T1w_label-SC_seg.json b/derivatives/labels/sub-fslAchieva03/anat/sub-fslAchieva03_space-other_T1w_label-SC_seg.json index dc5a7f0ea1..2bb9d7801b 100644 --- a/derivatives/labels/sub-fslAchieva03/anat/sub-fslAchieva03_space-other_T1w_label-SC_seg.json +++ b/derivatives/labels/sub-fslAchieva03/anat/sub-fslAchieva03_space-other_T1w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-07-12 15:07:15" + "Date": "2021-07-12 15:07:15", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-fslAchieva03/anat/sub-fslAchieva03_space-other_T2star_label-SC_seg.json b/derivatives/labels/sub-fslAchieva03/anat/sub-fslAchieva03_space-other_T2star_label-SC_seg.json index f219214e7e..7b12b39e9b 100644 --- a/derivatives/labels/sub-fslAchieva03/anat/sub-fslAchieva03_space-other_T2star_label-SC_seg.json +++ b/derivatives/labels/sub-fslAchieva03/anat/sub-fslAchieva03_space-other_T2star_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:01" + "Date": "2021-06-08 15:06:01", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-fslAchieva03/anat/sub-fslAchieva03_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-fslAchieva03/anat/sub-fslAchieva03_space-other_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-fslAchieva03/anat/sub-fslAchieva03_space-other_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-fslAchieva03/anat/sub-fslAchieva03_space-other_T2w_label-SC_seg.json b/derivatives/labels/sub-fslAchieva03/anat/sub-fslAchieva03_space-other_T2w_label-SC_seg.json index f219214e7e..390b6cf9c4 100644 --- a/derivatives/labels/sub-fslAchieva03/anat/sub-fslAchieva03_space-other_T2w_label-SC_seg.json +++ b/derivatives/labels/sub-fslAchieva03/anat/sub-fslAchieva03_space-other_T2w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:01" + "Date": "2021-06-08 15:06:01", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-fslAchieva03/dwi/sub-fslAchieva03_rec-average_dwi_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-fslAchieva03/dwi/sub-fslAchieva03_rec-average_dwi_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-fslAchieva03/dwi/sub-fslAchieva03_rec-average_dwi_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-fslAchieva04/anat/sub-fslAchieva04_flip-1_mt-on_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-fslAchieva04/anat/sub-fslAchieva04_flip-1_mt-on_space-other_MTS_label-SC_seg.json index f219214e7e..b90e9135ab 100644 --- a/derivatives/labels/sub-fslAchieva04/anat/sub-fslAchieva04_flip-1_mt-on_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-fslAchieva04/anat/sub-fslAchieva04_flip-1_mt-on_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:01" + "Date": "2021-06-08 15:06:01", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-fslAchieva04/anat/sub-fslAchieva04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-fslAchieva04/anat/sub-fslAchieva04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-fslAchieva04/anat/sub-fslAchieva04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-fslAchieva04/anat/sub-fslAchieva04_flip-2_mt-off_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-fslAchieva04/anat/sub-fslAchieva04_flip-2_mt-off_space-other_MTS_label-SC_seg.json index 60b66ba258..457c148212 100644 --- a/derivatives/labels/sub-fslAchieva04/anat/sub-fslAchieva04_flip-2_mt-off_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-fslAchieva04/anat/sub-fslAchieva04_flip-2_mt-off_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-05 16:59:49" + "Date": "2022-10-05 16:59:49", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-fslAchieva04/anat/sub-fslAchieva04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-fslAchieva04/anat/sub-fslAchieva04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-fslAchieva04/anat/sub-fslAchieva04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-fslAchieva04/anat/sub-fslAchieva04_space-other_T1w_label-SC_seg.json b/derivatives/labels/sub-fslAchieva04/anat/sub-fslAchieva04_space-other_T1w_label-SC_seg.json index f219214e7e..18e0646657 100644 --- a/derivatives/labels/sub-fslAchieva04/anat/sub-fslAchieva04_space-other_T1w_label-SC_seg.json +++ b/derivatives/labels/sub-fslAchieva04/anat/sub-fslAchieva04_space-other_T1w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:01" + "Date": "2021-06-08 15:06:01", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-fslAchieva04/anat/sub-fslAchieva04_space-other_T2star_gmlabel-SC_seg.json b/derivatives/labels/sub-fslAchieva04/anat/sub-fslAchieva04_space-other_T2star_gmlabel-SC_seg.json index 3e830bf0db..58d47c5ed2 100644 --- a/derivatives/labels/sub-fslAchieva04/anat/sub-fslAchieva04_space-other_T2star_gmlabel-SC_seg.json +++ b/derivatives/labels/sub-fslAchieva04/anat/sub-fslAchieva04_space-other_T2star_gmlabel-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-03 10:35:23" + "Date": "2021-06-03 10:35:23", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-fslAchieva04/anat/sub-fslAchieva04_space-other_T2star_label-SC_seg.json b/derivatives/labels/sub-fslAchieva04/anat/sub-fslAchieva04_space-other_T2star_label-SC_seg.json index 3f97d5d21c..15aca688b6 100644 --- a/derivatives/labels/sub-fslAchieva04/anat/sub-fslAchieva04_space-other_T2star_label-SC_seg.json +++ b/derivatives/labels/sub-fslAchieva04/anat/sub-fslAchieva04_space-other_T2star_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-07-12 15:11:09" + "Date": "2021-07-12 15:11:09", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-fslAchieva04/anat/sub-fslAchieva04_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-fslAchieva04/anat/sub-fslAchieva04_space-other_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-fslAchieva04/anat/sub-fslAchieva04_space-other_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-fslAchieva04/anat/sub-fslAchieva04_space-other_T2w_label-SC_seg.json b/derivatives/labels/sub-fslAchieva04/anat/sub-fslAchieva04_space-other_T2w_label-SC_seg.json index fbb91f5c3d..14f85a964f 100644 --- a/derivatives/labels/sub-fslAchieva04/anat/sub-fslAchieva04_space-other_T2w_label-SC_seg.json +++ b/derivatives/labels/sub-fslAchieva04/anat/sub-fslAchieva04_space-other_T2w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Etienne Bergeron", - "Date": "2021-06-28 15:34:02" + "Date": "2021-06-28 15:34:02", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-fslAchieva04/dwi/sub-fslAchieva04_rec-average_dwi_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-fslAchieva04/dwi/sub-fslAchieva04_rec-average_dwi_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-fslAchieva04/dwi/sub-fslAchieva04_rec-average_dwi_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-fslAchieva05/anat/sub-fslAchieva05_flip-1_mt-on_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-fslAchieva05/anat/sub-fslAchieva05_flip-1_mt-on_space-other_MTS_label-SC_seg.json index f219214e7e..b90e9135ab 100644 --- a/derivatives/labels/sub-fslAchieva05/anat/sub-fslAchieva05_flip-1_mt-on_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-fslAchieva05/anat/sub-fslAchieva05_flip-1_mt-on_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:01" + "Date": "2021-06-08 15:06:01", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-fslAchieva05/anat/sub-fslAchieva05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-fslAchieva05/anat/sub-fslAchieva05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-fslAchieva05/anat/sub-fslAchieva05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-fslAchieva05/anat/sub-fslAchieva05_flip-2_mt-off_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-fslAchieva05/anat/sub-fslAchieva05_flip-2_mt-off_space-other_MTS_label-SC_seg.json index 48a42796df..87f78f678a 100644 --- a/derivatives/labels/sub-fslAchieva05/anat/sub-fslAchieva05_flip-2_mt-off_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-fslAchieva05/anat/sub-fslAchieva05_flip-2_mt-off_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Julien Cohen-Adad", - "Date": "2020-09-03 15:34:36" + "Date": "2020-09-03 15:34:36", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-fslAchieva05/anat/sub-fslAchieva05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-fslAchieva05/anat/sub-fslAchieva05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-fslAchieva05/anat/sub-fslAchieva05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-fslAchieva05/anat/sub-fslAchieva05_space-other_T1w_label-SC_seg.json b/derivatives/labels/sub-fslAchieva05/anat/sub-fslAchieva05_space-other_T1w_label-SC_seg.json index 18463a88d5..25ed4fdff5 100644 --- a/derivatives/labels/sub-fslAchieva05/anat/sub-fslAchieva05_space-other_T1w_label-SC_seg.json +++ b/derivatives/labels/sub-fslAchieva05/anat/sub-fslAchieva05_space-other_T1w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Etienne Bergeron", - "Date": "2021-06-28 09:43:47" + "Date": "2021-06-28 09:43:47", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-fslAchieva05/anat/sub-fslAchieva05_space-other_T2star_label-SC_seg.json b/derivatives/labels/sub-fslAchieva05/anat/sub-fslAchieva05_space-other_T2star_label-SC_seg.json index f219214e7e..7b12b39e9b 100644 --- a/derivatives/labels/sub-fslAchieva05/anat/sub-fslAchieva05_space-other_T2star_label-SC_seg.json +++ b/derivatives/labels/sub-fslAchieva05/anat/sub-fslAchieva05_space-other_T2star_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:01" + "Date": "2021-06-08 15:06:01", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-fslAchieva05/anat/sub-fslAchieva05_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-fslAchieva05/anat/sub-fslAchieva05_space-other_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-fslAchieva05/anat/sub-fslAchieva05_space-other_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-fslAchieva05/anat/sub-fslAchieva05_space-other_T2w_label-SC_seg.json b/derivatives/labels/sub-fslAchieva05/anat/sub-fslAchieva05_space-other_T2w_label-SC_seg.json index f219214e7e..390b6cf9c4 100644 --- a/derivatives/labels/sub-fslAchieva05/anat/sub-fslAchieva05_space-other_T2w_label-SC_seg.json +++ b/derivatives/labels/sub-fslAchieva05/anat/sub-fslAchieva05_space-other_T2w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:01" + "Date": "2021-06-08 15:06:01", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-fslAchieva05/dwi/sub-fslAchieva05_rec-average_dwi_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-fslAchieva05/dwi/sub-fslAchieva05_rec-average_dwi_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-fslAchieva05/dwi/sub-fslAchieva05_rec-average_dwi_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-fslAchieva06/anat/sub-fslAchieva06_flip-1_mt-on_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-fslAchieva06/anat/sub-fslAchieva06_flip-1_mt-on_space-other_MTS_label-SC_seg.json index a959ae8ad3..5d09bac012 100644 --- a/derivatives/labels/sub-fslAchieva06/anat/sub-fslAchieva06_flip-1_mt-on_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-fslAchieva06/anat/sub-fslAchieva06_flip-1_mt-on_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:02" + "Date": "2021-06-08 15:06:02", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-fslAchieva06/anat/sub-fslAchieva06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-fslAchieva06/anat/sub-fslAchieva06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-fslAchieva06/anat/sub-fslAchieva06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-fslAchieva06/anat/sub-fslAchieva06_flip-2_mt-off_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-fslAchieva06/anat/sub-fslAchieva06_flip-2_mt-off_space-other_MTS_label-SC_seg.json index ea48fbbcf2..4e36209b52 100644 --- a/derivatives/labels/sub-fslAchieva06/anat/sub-fslAchieva06_flip-2_mt-off_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-fslAchieva06/anat/sub-fslAchieva06_flip-2_mt-off_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-07-12 15:14:08" + "Date": "2021-07-12 15:14:08", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-fslAchieva06/anat/sub-fslAchieva06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-fslAchieva06/anat/sub-fslAchieva06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-fslAchieva06/anat/sub-fslAchieva06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-fslAchieva06/anat/sub-fslAchieva06_space-other_T1w_label-SC_seg.json b/derivatives/labels/sub-fslAchieva06/anat/sub-fslAchieva06_space-other_T1w_label-SC_seg.json index 50c19f50bb..779c0b751a 100644 --- a/derivatives/labels/sub-fslAchieva06/anat/sub-fslAchieva06_space-other_T1w_label-SC_seg.json +++ b/derivatives/labels/sub-fslAchieva06/anat/sub-fslAchieva06_space-other_T1w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Etienne Bergeron", - "Date": "2021-06-28 15:24:31" + "Date": "2021-06-28 15:24:31", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-fslAchieva06/anat/sub-fslAchieva06_space-other_T2star_label-SC_seg.json b/derivatives/labels/sub-fslAchieva06/anat/sub-fslAchieva06_space-other_T2star_label-SC_seg.json index a959ae8ad3..6b773ba312 100644 --- a/derivatives/labels/sub-fslAchieva06/anat/sub-fslAchieva06_space-other_T2star_label-SC_seg.json +++ b/derivatives/labels/sub-fslAchieva06/anat/sub-fslAchieva06_space-other_T2star_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:02" + "Date": "2021-06-08 15:06:02", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-fslAchieva06/anat/sub-fslAchieva06_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-fslAchieva06/anat/sub-fslAchieva06_space-other_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-fslAchieva06/anat/sub-fslAchieva06_space-other_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-fslAchieva06/anat/sub-fslAchieva06_space-other_T2w_label-SC_seg.json b/derivatives/labels/sub-fslAchieva06/anat/sub-fslAchieva06_space-other_T2w_label-SC_seg.json index a959ae8ad3..8cd18ac4d1 100644 --- a/derivatives/labels/sub-fslAchieva06/anat/sub-fslAchieva06_space-other_T2w_label-SC_seg.json +++ b/derivatives/labels/sub-fslAchieva06/anat/sub-fslAchieva06_space-other_T2w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:02" + "Date": "2021-06-08 15:06:02", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-fslAchieva06/dwi/sub-fslAchieva06_rec-average_dwi_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-fslAchieva06/dwi/sub-fslAchieva06_rec-average_dwi_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-fslAchieva06/dwi/sub-fslAchieva06_rec-average_dwi_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-fslPrisma01/anat/sub-fslPrisma01_flip-1_mt-on_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-fslPrisma01/anat/sub-fslPrisma01_flip-1_mt-on_space-other_MTS_label-SC_seg.json index a959ae8ad3..5d09bac012 100644 --- a/derivatives/labels/sub-fslPrisma01/anat/sub-fslPrisma01_flip-1_mt-on_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-fslPrisma01/anat/sub-fslPrisma01_flip-1_mt-on_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:02" + "Date": "2021-06-08 15:06:02", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-fslPrisma01/anat/sub-fslPrisma01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-fslPrisma01/anat/sub-fslPrisma01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-fslPrisma01/anat/sub-fslPrisma01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-fslPrisma01/anat/sub-fslPrisma01_flip-2_mt-off_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-fslPrisma01/anat/sub-fslPrisma01_flip-2_mt-off_space-other_MTS_label-SC_seg.json index a959ae8ad3..5d09bac012 100644 --- a/derivatives/labels/sub-fslPrisma01/anat/sub-fslPrisma01_flip-2_mt-off_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-fslPrisma01/anat/sub-fslPrisma01_flip-2_mt-off_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:02" + "Date": "2021-06-08 15:06:02", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-fslPrisma01/anat/sub-fslPrisma01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-fslPrisma01/anat/sub-fslPrisma01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-fslPrisma01/anat/sub-fslPrisma01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-fslPrisma01/anat/sub-fslPrisma01_space-other_T1w_label-SC_seg.json b/derivatives/labels/sub-fslPrisma01/anat/sub-fslPrisma01_space-other_T1w_label-SC_seg.json index a3eee20ce4..895c94705c 100644 --- a/derivatives/labels/sub-fslPrisma01/anat/sub-fslPrisma01_space-other_T1w_label-SC_seg.json +++ b/derivatives/labels/sub-fslPrisma01/anat/sub-fslPrisma01_space-other_T1w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Etienne Bergeron", - "Date": "2021-06-28 09:39:44" + "Date": "2021-06-28 09:39:44", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-fslPrisma01/anat/sub-fslPrisma01_space-other_T2star_label-SC_seg.json b/derivatives/labels/sub-fslPrisma01/anat/sub-fslPrisma01_space-other_T2star_label-SC_seg.json index a959ae8ad3..6b773ba312 100644 --- a/derivatives/labels/sub-fslPrisma01/anat/sub-fslPrisma01_space-other_T2star_label-SC_seg.json +++ b/derivatives/labels/sub-fslPrisma01/anat/sub-fslPrisma01_space-other_T2star_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:02" + "Date": "2021-06-08 15:06:02", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-fslPrisma01/anat/sub-fslPrisma01_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-fslPrisma01/anat/sub-fslPrisma01_space-other_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-fslPrisma01/anat/sub-fslPrisma01_space-other_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-fslPrisma01/anat/sub-fslPrisma01_space-other_T2w_label-SC_seg.json b/derivatives/labels/sub-fslPrisma01/anat/sub-fslPrisma01_space-other_T2w_label-SC_seg.json index a959ae8ad3..8cd18ac4d1 100644 --- a/derivatives/labels/sub-fslPrisma01/anat/sub-fslPrisma01_space-other_T2w_label-SC_seg.json +++ b/derivatives/labels/sub-fslPrisma01/anat/sub-fslPrisma01_space-other_T2w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:02" + "Date": "2021-06-08 15:06:02", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-fslPrisma01/dwi/sub-fslPrisma01_rec-average_dwi_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-fslPrisma01/dwi/sub-fslPrisma01_rec-average_dwi_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-fslPrisma01/dwi/sub-fslPrisma01_rec-average_dwi_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-fslPrisma02/anat/sub-fslPrisma02_flip-1_mt-on_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-fslPrisma02/anat/sub-fslPrisma02_flip-1_mt-on_space-other_MTS_label-SC_seg.json index a959ae8ad3..5d09bac012 100644 --- a/derivatives/labels/sub-fslPrisma02/anat/sub-fslPrisma02_flip-1_mt-on_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-fslPrisma02/anat/sub-fslPrisma02_flip-1_mt-on_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:02" + "Date": "2021-06-08 15:06:02", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-fslPrisma02/anat/sub-fslPrisma02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-fslPrisma02/anat/sub-fslPrisma02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-fslPrisma02/anat/sub-fslPrisma02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-fslPrisma02/anat/sub-fslPrisma02_flip-2_mt-off_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-fslPrisma02/anat/sub-fslPrisma02_flip-2_mt-off_space-other_MTS_label-SC_seg.json index a959ae8ad3..5d09bac012 100644 --- a/derivatives/labels/sub-fslPrisma02/anat/sub-fslPrisma02_flip-2_mt-off_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-fslPrisma02/anat/sub-fslPrisma02_flip-2_mt-off_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:02" + "Date": "2021-06-08 15:06:02", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-fslPrisma02/anat/sub-fslPrisma02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-fslPrisma02/anat/sub-fslPrisma02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-fslPrisma02/anat/sub-fslPrisma02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-fslPrisma02/anat/sub-fslPrisma02_space-other_T1w_label-SC_seg.json b/derivatives/labels/sub-fslPrisma02/anat/sub-fslPrisma02_space-other_T1w_label-SC_seg.json index 7eaf75199d..ff3e973fd4 100644 --- a/derivatives/labels/sub-fslPrisma02/anat/sub-fslPrisma02_space-other_T1w_label-SC_seg.json +++ b/derivatives/labels/sub-fslPrisma02/anat/sub-fslPrisma02_space-other_T1w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Etienne Bergeron", - "Date": "2021-06-28 09:34:53" + "Date": "2021-06-28 09:34:53", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-fslPrisma02/anat/sub-fslPrisma02_space-other_T2star_label-SC_seg.json b/derivatives/labels/sub-fslPrisma02/anat/sub-fslPrisma02_space-other_T2star_label-SC_seg.json index a959ae8ad3..6b773ba312 100644 --- a/derivatives/labels/sub-fslPrisma02/anat/sub-fslPrisma02_space-other_T2star_label-SC_seg.json +++ b/derivatives/labels/sub-fslPrisma02/anat/sub-fslPrisma02_space-other_T2star_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:02" + "Date": "2021-06-08 15:06:02", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-fslPrisma02/anat/sub-fslPrisma02_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-fslPrisma02/anat/sub-fslPrisma02_space-other_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-fslPrisma02/anat/sub-fslPrisma02_space-other_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-fslPrisma02/anat/sub-fslPrisma02_space-other_T2w_label-SC_seg.json b/derivatives/labels/sub-fslPrisma02/anat/sub-fslPrisma02_space-other_T2w_label-SC_seg.json index 061ad2174d..599f938105 100644 --- a/derivatives/labels/sub-fslPrisma02/anat/sub-fslPrisma02_space-other_T2w_label-SC_seg.json +++ b/derivatives/labels/sub-fslPrisma02/anat/sub-fslPrisma02_space-other_T2w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Etienne Bergeron", - "Date": "2021-06-28 15:47:57" + "Date": "2021-06-28 15:47:57", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-fslPrisma02/dwi/sub-fslPrisma02_rec-average_dwi_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-fslPrisma02/dwi/sub-fslPrisma02_rec-average_dwi_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-fslPrisma02/dwi/sub-fslPrisma02_rec-average_dwi_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-fslPrisma03/anat/sub-fslPrisma03_flip-1_mt-on_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-fslPrisma03/anat/sub-fslPrisma03_flip-1_mt-on_space-other_MTS_label-SC_seg.json index d2285c70d7..1c7810a3a7 100644 --- a/derivatives/labels/sub-fslPrisma03/anat/sub-fslPrisma03_flip-1_mt-on_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-fslPrisma03/anat/sub-fslPrisma03_flip-1_mt-on_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Benjamin Carrier", - "Date": "2021-07-13 11:03:02" + "Date": "2021-07-13 11:03:02", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-fslPrisma03/anat/sub-fslPrisma03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-fslPrisma03/anat/sub-fslPrisma03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-fslPrisma03/anat/sub-fslPrisma03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-fslPrisma03/anat/sub-fslPrisma03_flip-2_mt-off_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-fslPrisma03/anat/sub-fslPrisma03_flip-2_mt-off_space-other_MTS_label-SC_seg.json index 413fa06f2c..49b1c3b6e7 100644 --- a/derivatives/labels/sub-fslPrisma03/anat/sub-fslPrisma03_flip-2_mt-off_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-fslPrisma03/anat/sub-fslPrisma03_flip-2_mt-off_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Benjamin Carrier", - "Date": "2021-07-12 12:31:01" + "Date": "2021-07-12 12:31:01", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-fslPrisma03/anat/sub-fslPrisma03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-fslPrisma03/anat/sub-fslPrisma03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-fslPrisma03/anat/sub-fslPrisma03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-fslPrisma03/anat/sub-fslPrisma03_space-other_T1w_label-SC_seg.json b/derivatives/labels/sub-fslPrisma03/anat/sub-fslPrisma03_space-other_T1w_label-SC_seg.json index 5362bc3c6f..c95c7aec9b 100644 --- a/derivatives/labels/sub-fslPrisma03/anat/sub-fslPrisma03_space-other_T1w_label-SC_seg.json +++ b/derivatives/labels/sub-fslPrisma03/anat/sub-fslPrisma03_space-other_T1w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Etienne Bergeron", - "Date": "2021-06-28 09:59:21" + "Date": "2021-06-28 09:59:21", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-fslPrisma03/anat/sub-fslPrisma03_space-other_T2star_label-SC_seg.json b/derivatives/labels/sub-fslPrisma03/anat/sub-fslPrisma03_space-other_T2star_label-SC_seg.json index e30e99918f..ba7419328d 100644 --- a/derivatives/labels/sub-fslPrisma03/anat/sub-fslPrisma03_space-other_T2star_label-SC_seg.json +++ b/derivatives/labels/sub-fslPrisma03/anat/sub-fslPrisma03_space-other_T2star_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Benjamin Carrier", - "Date": "2021-07-13 11:31:16" + "Date": "2021-07-13 11:31:16", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-fslPrisma03/anat/sub-fslPrisma03_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-fslPrisma03/anat/sub-fslPrisma03_space-other_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-fslPrisma03/anat/sub-fslPrisma03_space-other_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-fslPrisma03/anat/sub-fslPrisma03_space-other_T2w_label-SC_seg.json b/derivatives/labels/sub-fslPrisma03/anat/sub-fslPrisma03_space-other_T2w_label-SC_seg.json index acf45009b6..c05630db52 100644 --- a/derivatives/labels/sub-fslPrisma03/anat/sub-fslPrisma03_space-other_T2w_label-SC_seg.json +++ b/derivatives/labels/sub-fslPrisma03/anat/sub-fslPrisma03_space-other_T2w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Etienne Bergeron", - "Date": "2021-06-28 15:50:28" + "Date": "2021-06-28 15:50:28", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-fslPrisma03/dwi/sub-fslPrisma03_rec-average_dwi_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-fslPrisma03/dwi/sub-fslPrisma03_rec-average_dwi_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-fslPrisma03/dwi/sub-fslPrisma03_rec-average_dwi_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-fslPrisma04/anat/sub-fslPrisma04_flip-1_mt-on_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-fslPrisma04/anat/sub-fslPrisma04_flip-1_mt-on_space-other_MTS_label-SC_seg.json index 50e821a9f5..00b243484a 100644 --- a/derivatives/labels/sub-fslPrisma04/anat/sub-fslPrisma04_flip-1_mt-on_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-fslPrisma04/anat/sub-fslPrisma04_flip-1_mt-on_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-08-04 12:07:56" + "Date": "2021-08-04 12:07:56", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-fslPrisma04/anat/sub-fslPrisma04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-fslPrisma04/anat/sub-fslPrisma04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-fslPrisma04/anat/sub-fslPrisma04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-fslPrisma04/anat/sub-fslPrisma04_flip-2_mt-off_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-fslPrisma04/anat/sub-fslPrisma04_flip-2_mt-off_space-other_MTS_label-SC_seg.json index a959ae8ad3..5d09bac012 100644 --- a/derivatives/labels/sub-fslPrisma04/anat/sub-fslPrisma04_flip-2_mt-off_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-fslPrisma04/anat/sub-fslPrisma04_flip-2_mt-off_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:02" + "Date": "2021-06-08 15:06:02", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-fslPrisma04/anat/sub-fslPrisma04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-fslPrisma04/anat/sub-fslPrisma04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-fslPrisma04/anat/sub-fslPrisma04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-fslPrisma04/anat/sub-fslPrisma04_space-other_T1w_label-SC_seg.json b/derivatives/labels/sub-fslPrisma04/anat/sub-fslPrisma04_space-other_T1w_label-SC_seg.json index aef40dbb7c..661a851d27 100644 --- a/derivatives/labels/sub-fslPrisma04/anat/sub-fslPrisma04_space-other_T1w_label-SC_seg.json +++ b/derivatives/labels/sub-fslPrisma04/anat/sub-fslPrisma04_space-other_T1w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Yassine El Bouchaibi", - "Date": "2021-07-08 22:40:19" + "Date": "2021-07-08 22:40:19", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-fslPrisma04/anat/sub-fslPrisma04_space-other_T2star_label-SC_seg.json b/derivatives/labels/sub-fslPrisma04/anat/sub-fslPrisma04_space-other_T2star_label-SC_seg.json index a959ae8ad3..6b773ba312 100644 --- a/derivatives/labels/sub-fslPrisma04/anat/sub-fslPrisma04_space-other_T2star_label-SC_seg.json +++ b/derivatives/labels/sub-fslPrisma04/anat/sub-fslPrisma04_space-other_T2star_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:02" + "Date": "2021-06-08 15:06:02", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-fslPrisma04/anat/sub-fslPrisma04_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-fslPrisma04/anat/sub-fslPrisma04_space-other_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-fslPrisma04/anat/sub-fslPrisma04_space-other_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-fslPrisma04/anat/sub-fslPrisma04_space-other_T2w_label-SC_seg.json b/derivatives/labels/sub-fslPrisma04/anat/sub-fslPrisma04_space-other_T2w_label-SC_seg.json index a959ae8ad3..8cd18ac4d1 100644 --- a/derivatives/labels/sub-fslPrisma04/anat/sub-fslPrisma04_space-other_T2w_label-SC_seg.json +++ b/derivatives/labels/sub-fslPrisma04/anat/sub-fslPrisma04_space-other_T2w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:02" + "Date": "2021-06-08 15:06:02", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-fslPrisma04/dwi/sub-fslPrisma04_rec-average_dwi_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-fslPrisma04/dwi/sub-fslPrisma04_rec-average_dwi_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-fslPrisma04/dwi/sub-fslPrisma04_rec-average_dwi_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-fslPrisma05/anat/sub-fslPrisma05_flip-1_mt-on_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-fslPrisma05/anat/sub-fslPrisma05_flip-1_mt-on_space-other_MTS_label-SC_seg.json index 942b4933e3..27321fd1b1 100644 --- a/derivatives/labels/sub-fslPrisma05/anat/sub-fslPrisma05_flip-1_mt-on_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-fslPrisma05/anat/sub-fslPrisma05_flip-1_mt-on_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Benjamin Carrier", - "Date": "2021-07-13 10:59:55" + "Date": "2021-07-13 10:59:55", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-fslPrisma05/anat/sub-fslPrisma05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-fslPrisma05/anat/sub-fslPrisma05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-fslPrisma05/anat/sub-fslPrisma05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-fslPrisma05/anat/sub-fslPrisma05_flip-2_mt-off_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-fslPrisma05/anat/sub-fslPrisma05_flip-2_mt-off_space-other_MTS_label-SC_seg.json index 27441c750f..2c5abd3940 100644 --- a/derivatives/labels/sub-fslPrisma05/anat/sub-fslPrisma05_flip-2_mt-off_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-fslPrisma05/anat/sub-fslPrisma05_flip-2_mt-off_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Benjamin Carrier", - "Date": "2021-07-12 12:27:18" + "Date": "2021-07-12 12:27:18", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-fslPrisma05/anat/sub-fslPrisma05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-fslPrisma05/anat/sub-fslPrisma05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-fslPrisma05/anat/sub-fslPrisma05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-fslPrisma05/anat/sub-fslPrisma05_space-other_T1w_label-SC_seg.json b/derivatives/labels/sub-fslPrisma05/anat/sub-fslPrisma05_space-other_T1w_label-SC_seg.json index 9427db00af..c4d5664c06 100644 --- a/derivatives/labels/sub-fslPrisma05/anat/sub-fslPrisma05_space-other_T1w_label-SC_seg.json +++ b/derivatives/labels/sub-fslPrisma05/anat/sub-fslPrisma05_space-other_T1w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Etienne Bergeron", - "Date": "2021-06-28 09:55:36" + "Date": "2021-06-28 09:55:36", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-fslPrisma05/anat/sub-fslPrisma05_space-other_T2star_label-SC_seg.json b/derivatives/labels/sub-fslPrisma05/anat/sub-fslPrisma05_space-other_T2star_label-SC_seg.json index a959ae8ad3..6b773ba312 100644 --- a/derivatives/labels/sub-fslPrisma05/anat/sub-fslPrisma05_space-other_T2star_label-SC_seg.json +++ b/derivatives/labels/sub-fslPrisma05/anat/sub-fslPrisma05_space-other_T2star_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:02" + "Date": "2021-06-08 15:06:02", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-fslPrisma05/anat/sub-fslPrisma05_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-fslPrisma05/anat/sub-fslPrisma05_space-other_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-fslPrisma05/anat/sub-fslPrisma05_space-other_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-fslPrisma05/anat/sub-fslPrisma05_space-other_T2w_label-SC_seg.json b/derivatives/labels/sub-fslPrisma05/anat/sub-fslPrisma05_space-other_T2w_label-SC_seg.json index a959ae8ad3..8cd18ac4d1 100644 --- a/derivatives/labels/sub-fslPrisma05/anat/sub-fslPrisma05_space-other_T2w_label-SC_seg.json +++ b/derivatives/labels/sub-fslPrisma05/anat/sub-fslPrisma05_space-other_T2w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:02" + "Date": "2021-06-08 15:06:02", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-fslPrisma05/dwi/sub-fslPrisma05_rec-average_dwi_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-fslPrisma05/dwi/sub-fslPrisma05_rec-average_dwi_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-fslPrisma05/dwi/sub-fslPrisma05_rec-average_dwi_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-fslPrisma06/anat/sub-fslPrisma06_flip-1_mt-on_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-fslPrisma06/anat/sub-fslPrisma06_flip-1_mt-on_space-other_MTS_label-SC_seg.json index a959ae8ad3..5d09bac012 100644 --- a/derivatives/labels/sub-fslPrisma06/anat/sub-fslPrisma06_flip-1_mt-on_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-fslPrisma06/anat/sub-fslPrisma06_flip-1_mt-on_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:02" + "Date": "2021-06-08 15:06:02", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-fslPrisma06/anat/sub-fslPrisma06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-fslPrisma06/anat/sub-fslPrisma06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-fslPrisma06/anat/sub-fslPrisma06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-fslPrisma06/anat/sub-fslPrisma06_flip-2_mt-off_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-fslPrisma06/anat/sub-fslPrisma06_flip-2_mt-off_space-other_MTS_label-SC_seg.json index 9cf4c8e743..226d330ad9 100644 --- a/derivatives/labels/sub-fslPrisma06/anat/sub-fslPrisma06_flip-2_mt-off_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-fslPrisma06/anat/sub-fslPrisma06_flip-2_mt-off_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Benjamin Carrier", - "Date": "2021-07-12 12:29:18" + "Date": "2021-07-12 12:29:18", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-fslPrisma06/anat/sub-fslPrisma06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-fslPrisma06/anat/sub-fslPrisma06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-fslPrisma06/anat/sub-fslPrisma06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-fslPrisma06/anat/sub-fslPrisma06_space-other_T1w_label-SC_seg.json b/derivatives/labels/sub-fslPrisma06/anat/sub-fslPrisma06_space-other_T1w_label-SC_seg.json index 73939f5fef..9a927e4ef6 100644 --- a/derivatives/labels/sub-fslPrisma06/anat/sub-fslPrisma06_space-other_T1w_label-SC_seg.json +++ b/derivatives/labels/sub-fslPrisma06/anat/sub-fslPrisma06_space-other_T1w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Etienne Bergeron", - "Date": "2021-06-28 09:53:54" + "Date": "2021-06-28 09:53:54", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-fslPrisma06/anat/sub-fslPrisma06_space-other_T2star_label-SC_seg.json b/derivatives/labels/sub-fslPrisma06/anat/sub-fslPrisma06_space-other_T2star_label-SC_seg.json index 5f59bde98a..c68f3ce17e 100644 --- a/derivatives/labels/sub-fslPrisma06/anat/sub-fslPrisma06_space-other_T2star_label-SC_seg.json +++ b/derivatives/labels/sub-fslPrisma06/anat/sub-fslPrisma06_space-other_T2star_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Benjamin Carrier", - "Date": "2021-07-13 11:24:19" + "Date": "2021-07-13 11:24:19", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-fslPrisma06/anat/sub-fslPrisma06_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-fslPrisma06/anat/sub-fslPrisma06_space-other_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-fslPrisma06/anat/sub-fslPrisma06_space-other_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-fslPrisma06/anat/sub-fslPrisma06_space-other_T2w_label-SC_seg.json b/derivatives/labels/sub-fslPrisma06/anat/sub-fslPrisma06_space-other_T2w_label-SC_seg.json index a959ae8ad3..8cd18ac4d1 100644 --- a/derivatives/labels/sub-fslPrisma06/anat/sub-fslPrisma06_space-other_T2w_label-SC_seg.json +++ b/derivatives/labels/sub-fslPrisma06/anat/sub-fslPrisma06_space-other_T2w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:02" + "Date": "2021-06-08 15:06:02", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-fslPrisma06/dwi/sub-fslPrisma06_rec-average_dwi_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-fslPrisma06/dwi/sub-fslPrisma06_rec-average_dwi_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-fslPrisma06/dwi/sub-fslPrisma06_rec-average_dwi_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-geneva01/anat/sub-geneva01_flip-1_mt-on_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-geneva01/anat/sub-geneva01_flip-1_mt-on_space-other_MTS_label-SC_seg.json index e6ba692215..e8c8dd4cef 100644 --- a/derivatives/labels/sub-geneva01/anat/sub-geneva01_flip-1_mt-on_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-geneva01/anat/sub-geneva01_flip-1_mt-on_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-08-04 12:25:42" + "Date": "2021-08-04 12:25:42", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-geneva01/anat/sub-geneva01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-geneva01/anat/sub-geneva01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-geneva01/anat/sub-geneva01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-geneva01/anat/sub-geneva01_flip-2_mt-off_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-geneva01/anat/sub-geneva01_flip-2_mt-off_space-other_MTS_label-SC_seg.json index c704e8a86e..a54de1833a 100644 --- a/derivatives/labels/sub-geneva01/anat/sub-geneva01_flip-2_mt-off_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-geneva01/anat/sub-geneva01_flip-2_mt-off_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-08-04 12:22:34" + "Date": "2021-08-04 12:22:34", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-geneva01/anat/sub-geneva01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-geneva01/anat/sub-geneva01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-geneva01/anat/sub-geneva01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-geneva01/anat/sub-geneva01_space-other_T1w_label-SC_seg.json b/derivatives/labels/sub-geneva01/anat/sub-geneva01_space-other_T1w_label-SC_seg.json index 8cadea7b0d..c78c636809 100644 --- a/derivatives/labels/sub-geneva01/anat/sub-geneva01_space-other_T1w_label-SC_seg.json +++ b/derivatives/labels/sub-geneva01/anat/sub-geneva01_space-other_T1w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Etienne Bergeron", - "Date": "2021-06-28 13:02:47" + "Date": "2021-06-28 13:02:47", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-geneva01/anat/sub-geneva01_space-other_T2star_label-SC_seg.json b/derivatives/labels/sub-geneva01/anat/sub-geneva01_space-other_T2star_label-SC_seg.json index c9f54243f9..54b4330997 100644 --- a/derivatives/labels/sub-geneva01/anat/sub-geneva01_space-other_T2star_label-SC_seg.json +++ b/derivatives/labels/sub-geneva01/anat/sub-geneva01_space-other_T2star_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-07-16 09:32:44" + "Date": "2021-07-16 09:32:44", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-geneva01/anat/sub-geneva01_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-geneva01/anat/sub-geneva01_space-other_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-geneva01/anat/sub-geneva01_space-other_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-geneva01/anat/sub-geneva01_space-other_T2w_label-SC_seg.json b/derivatives/labels/sub-geneva01/anat/sub-geneva01_space-other_T2w_label-SC_seg.json index 49568957d0..06b1abaee7 100644 --- a/derivatives/labels/sub-geneva01/anat/sub-geneva01_space-other_T2w_label-SC_seg.json +++ b/derivatives/labels/sub-geneva01/anat/sub-geneva01_space-other_T2w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Benjamin Carrier", - "Date": "2021-07-12 12:11:51" + "Date": "2021-07-12 12:11:51", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-geneva01/dwi/sub-geneva01_rec-average_dwi_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-geneva01/dwi/sub-geneva01_rec-average_dwi_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-geneva01/dwi/sub-geneva01_rec-average_dwi_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-geneva02/anat/sub-geneva02_flip-1_mt-on_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-geneva02/anat/sub-geneva02_flip-1_mt-on_space-other_MTS_label-SC_seg.json index 943dd6d88d..943e2677f9 100644 --- a/derivatives/labels/sub-geneva02/anat/sub-geneva02_flip-1_mt-on_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-geneva02/anat/sub-geneva02_flip-1_mt-on_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:03" + "Date": "2021-06-08 15:06:03", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-geneva02/anat/sub-geneva02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-geneva02/anat/sub-geneva02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-geneva02/anat/sub-geneva02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-geneva02/anat/sub-geneva02_flip-2_mt-off_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-geneva02/anat/sub-geneva02_flip-2_mt-off_space-other_MTS_label-SC_seg.json index 943dd6d88d..943e2677f9 100644 --- a/derivatives/labels/sub-geneva02/anat/sub-geneva02_flip-2_mt-off_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-geneva02/anat/sub-geneva02_flip-2_mt-off_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:03" + "Date": "2021-06-08 15:06:03", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-geneva02/anat/sub-geneva02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-geneva02/anat/sub-geneva02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-geneva02/anat/sub-geneva02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-geneva02/anat/sub-geneva02_space-other_T1w_label-SC_seg.json b/derivatives/labels/sub-geneva02/anat/sub-geneva02_space-other_T1w_label-SC_seg.json index 943dd6d88d..103e79d889 100644 --- a/derivatives/labels/sub-geneva02/anat/sub-geneva02_space-other_T1w_label-SC_seg.json +++ b/derivatives/labels/sub-geneva02/anat/sub-geneva02_space-other_T1w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:03" + "Date": "2021-06-08 15:06:03", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-geneva02/anat/sub-geneva02_space-other_T2star_label-SC_seg.json b/derivatives/labels/sub-geneva02/anat/sub-geneva02_space-other_T2star_label-SC_seg.json index 135214da92..e61c2ffe97 100644 --- a/derivatives/labels/sub-geneva02/anat/sub-geneva02_space-other_T2star_label-SC_seg.json +++ b/derivatives/labels/sub-geneva02/anat/sub-geneva02_space-other_T2star_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Benjamin Carrier", - "Date": "2021-07-13 12:14:09" + "Date": "2021-07-13 12:14:09", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-geneva02/anat/sub-geneva02_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-geneva02/anat/sub-geneva02_space-other_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-geneva02/anat/sub-geneva02_space-other_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-geneva02/anat/sub-geneva02_space-other_T2w_label-SC_seg.json b/derivatives/labels/sub-geneva02/anat/sub-geneva02_space-other_T2w_label-SC_seg.json index 3799d526ee..f0ea0c741c 100644 --- a/derivatives/labels/sub-geneva02/anat/sub-geneva02_space-other_T2w_label-SC_seg.json +++ b/derivatives/labels/sub-geneva02/anat/sub-geneva02_space-other_T2w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Etienne Bergeron", - "Date": "2021-06-28 16:16:03" + "Date": "2021-06-28 16:16:03", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-geneva02/dwi/sub-geneva02_rec-average_dwi_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-geneva02/dwi/sub-geneva02_rec-average_dwi_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-geneva02/dwi/sub-geneva02_rec-average_dwi_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-geneva03/anat/sub-geneva03_flip-1_mt-on_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-geneva03/anat/sub-geneva03_flip-1_mt-on_space-other_MTS_label-SC_seg.json index 943dd6d88d..943e2677f9 100644 --- a/derivatives/labels/sub-geneva03/anat/sub-geneva03_flip-1_mt-on_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-geneva03/anat/sub-geneva03_flip-1_mt-on_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:03" + "Date": "2021-06-08 15:06:03", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-geneva03/anat/sub-geneva03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-geneva03/anat/sub-geneva03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-geneva03/anat/sub-geneva03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-geneva03/anat/sub-geneva03_flip-2_mt-off_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-geneva03/anat/sub-geneva03_flip-2_mt-off_space-other_MTS_label-SC_seg.json index 562d97d7b9..a917566286 100644 --- a/derivatives/labels/sub-geneva03/anat/sub-geneva03_flip-2_mt-off_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-geneva03/anat/sub-geneva03_flip-2_mt-off_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Benjamin Carrier", - "Date": "2021-07-12 16:28:17" + "Date": "2021-07-12 16:28:17", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-geneva03/anat/sub-geneva03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-geneva03/anat/sub-geneva03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-geneva03/anat/sub-geneva03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-geneva03/anat/sub-geneva03_space-other_T1w_label-SC_seg.json b/derivatives/labels/sub-geneva03/anat/sub-geneva03_space-other_T1w_label-SC_seg.json index 595359dc50..5af07932c7 100644 --- a/derivatives/labels/sub-geneva03/anat/sub-geneva03_space-other_T1w_label-SC_seg.json +++ b/derivatives/labels/sub-geneva03/anat/sub-geneva03_space-other_T1w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Etienne Bergeron", - "Date": "2021-06-28 13:07:37" + "Date": "2021-06-28 13:07:37", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-geneva03/anat/sub-geneva03_space-other_T2star_label-SC_seg.json b/derivatives/labels/sub-geneva03/anat/sub-geneva03_space-other_T2star_label-SC_seg.json index 72fbaf1963..cf2f3ccb24 100644 --- a/derivatives/labels/sub-geneva03/anat/sub-geneva03_space-other_T2star_label-SC_seg.json +++ b/derivatives/labels/sub-geneva03/anat/sub-geneva03_space-other_T2star_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Benjamin Carrier", - "Date": "2021-07-13 12:11:41" + "Date": "2021-07-13 12:11:41", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-geneva03/anat/sub-geneva03_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-geneva03/anat/sub-geneva03_space-other_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-geneva03/anat/sub-geneva03_space-other_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-geneva03/anat/sub-geneva03_space-other_T2w_label-SC_seg.json b/derivatives/labels/sub-geneva03/anat/sub-geneva03_space-other_T2w_label-SC_seg.json index 26f00c0286..cc377c925c 100644 --- a/derivatives/labels/sub-geneva03/anat/sub-geneva03_space-other_T2w_label-SC_seg.json +++ b/derivatives/labels/sub-geneva03/anat/sub-geneva03_space-other_T2w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Etienne Bergeron", - "Date": "2021-06-28 15:57:19" + "Date": "2021-06-28 15:57:19", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-geneva03/dwi/sub-geneva03_rec-average_dwi_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-geneva03/dwi/sub-geneva03_rec-average_dwi_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-geneva03/dwi/sub-geneva03_rec-average_dwi_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-geneva04/anat/sub-geneva04_flip-1_mt-on_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-geneva04/anat/sub-geneva04_flip-1_mt-on_space-other_MTS_label-SC_seg.json index d861a725d2..ab57e55ec0 100644 --- a/derivatives/labels/sub-geneva04/anat/sub-geneva04_flip-1_mt-on_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-geneva04/anat/sub-geneva04_flip-1_mt-on_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Benjamin Carrier", - "Date": "2021-07-13 11:17:43" + "Date": "2021-07-13 11:17:43", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-geneva04/anat/sub-geneva04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-geneva04/anat/sub-geneva04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-geneva04/anat/sub-geneva04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-geneva04/anat/sub-geneva04_flip-2_mt-off_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-geneva04/anat/sub-geneva04_flip-2_mt-off_space-other_MTS_label-SC_seg.json index 87297efd23..9c15c7b7d1 100644 --- a/derivatives/labels/sub-geneva04/anat/sub-geneva04_flip-2_mt-off_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-geneva04/anat/sub-geneva04_flip-2_mt-off_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Benjamin Carrier", - "Date": "2021-07-13 10:57:36" + "Date": "2021-07-13 10:57:36", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-geneva04/anat/sub-geneva04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-geneva04/anat/sub-geneva04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-geneva04/anat/sub-geneva04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-geneva04/anat/sub-geneva04_space-other_T1w_label-SC_seg.json b/derivatives/labels/sub-geneva04/anat/sub-geneva04_space-other_T1w_label-SC_seg.json index a06a12afe9..68df9c84e7 100644 --- a/derivatives/labels/sub-geneva04/anat/sub-geneva04_space-other_T1w_label-SC_seg.json +++ b/derivatives/labels/sub-geneva04/anat/sub-geneva04_space-other_T1w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Etienne Bergeron", - "Date": "2021-06-28 12:57:23" + "Date": "2021-06-28 12:57:23", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-geneva04/anat/sub-geneva04_space-other_T2star_label-SC_seg.json b/derivatives/labels/sub-geneva04/anat/sub-geneva04_space-other_T2star_label-SC_seg.json index 943dd6d88d..baef6a79d5 100644 --- a/derivatives/labels/sub-geneva04/anat/sub-geneva04_space-other_T2star_label-SC_seg.json +++ b/derivatives/labels/sub-geneva04/anat/sub-geneva04_space-other_T2star_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:03" + "Date": "2021-06-08 15:06:03", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-geneva04/anat/sub-geneva04_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-geneva04/anat/sub-geneva04_space-other_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-geneva04/anat/sub-geneva04_space-other_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-geneva04/anat/sub-geneva04_space-other_T2w_csflabel-SC_seg.json b/derivatives/labels/sub-geneva04/anat/sub-geneva04_space-other_T2w_csflabel-SC_seg.json index 5d72cb8aaa..2edede9801 100644 --- a/derivatives/labels/sub-geneva04/anat/sub-geneva04_space-other_T2w_csflabel-SC_seg.json +++ b/derivatives/labels/sub-geneva04/anat/sub-geneva04_space-other_T2w_csflabel-SC_seg.json @@ -1,3 +1,7 @@ { - "author": "Charley Gros" -} + "author": "Charley Gros", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/labels/sub-geneva04/anat/sub-geneva04_space-other_T2w_label-SC_seg.json b/derivatives/labels/sub-geneva04/anat/sub-geneva04_space-other_T2w_label-SC_seg.json index c8295adebd..b13cb9bd41 100644 --- a/derivatives/labels/sub-geneva04/anat/sub-geneva04_space-other_T2w_label-SC_seg.json +++ b/derivatives/labels/sub-geneva04/anat/sub-geneva04_space-other_T2w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Benjamin Carrier", - "Date": "2021-07-12 12:04:55" + "Date": "2021-07-12 12:04:55", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-geneva04/dwi/sub-geneva04_rec-average_dwi_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-geneva04/dwi/sub-geneva04_rec-average_dwi_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-geneva04/dwi/sub-geneva04_rec-average_dwi_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-geneva05/anat/sub-geneva05_flip-1_mt-on_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-geneva05/anat/sub-geneva05_flip-1_mt-on_space-other_MTS_label-SC_seg.json index 67a33bc0ea..17b1b90af9 100644 --- a/derivatives/labels/sub-geneva05/anat/sub-geneva05_flip-1_mt-on_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-geneva05/anat/sub-geneva05_flip-1_mt-on_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Benjamin Carrier", - "Date": "2021-07-13 11:27:17" + "Date": "2021-07-13 11:27:17", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-geneva05/anat/sub-geneva05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-geneva05/anat/sub-geneva05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-geneva05/anat/sub-geneva05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-geneva05/anat/sub-geneva05_flip-2_mt-off_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-geneva05/anat/sub-geneva05_flip-2_mt-off_space-other_MTS_label-SC_seg.json index 943dd6d88d..943e2677f9 100644 --- a/derivatives/labels/sub-geneva05/anat/sub-geneva05_flip-2_mt-off_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-geneva05/anat/sub-geneva05_flip-2_mt-off_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:03" + "Date": "2021-06-08 15:06:03", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-geneva05/anat/sub-geneva05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-geneva05/anat/sub-geneva05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-geneva05/anat/sub-geneva05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-geneva05/anat/sub-geneva05_space-other_T1w_label-SC_seg.json b/derivatives/labels/sub-geneva05/anat/sub-geneva05_space-other_T1w_label-SC_seg.json index 93d5bc58d1..7e7978cb19 100644 --- a/derivatives/labels/sub-geneva05/anat/sub-geneva05_space-other_T1w_label-SC_seg.json +++ b/derivatives/labels/sub-geneva05/anat/sub-geneva05_space-other_T1w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Etienne Bergeron", - "Date": "2021-06-28 13:13:05" + "Date": "2021-06-28 13:13:05", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-geneva05/anat/sub-geneva05_space-other_T2star_label-SC_seg.json b/derivatives/labels/sub-geneva05/anat/sub-geneva05_space-other_T2star_label-SC_seg.json index 3d68e07c90..5b5c1f037e 100644 --- a/derivatives/labels/sub-geneva05/anat/sub-geneva05_space-other_T2star_label-SC_seg.json +++ b/derivatives/labels/sub-geneva05/anat/sub-geneva05_space-other_T2star_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Benjamin Carrier", - "Date": "2021-07-13 15:07:29" + "Date": "2021-07-13 15:07:29", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-geneva05/anat/sub-geneva05_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-geneva05/anat/sub-geneva05_space-other_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-geneva05/anat/sub-geneva05_space-other_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-geneva05/anat/sub-geneva05_space-other_T2w_label-SC_seg.json b/derivatives/labels/sub-geneva05/anat/sub-geneva05_space-other_T2w_label-SC_seg.json index 943dd6d88d..00856cf86b 100644 --- a/derivatives/labels/sub-geneva05/anat/sub-geneva05_space-other_T2w_label-SC_seg.json +++ b/derivatives/labels/sub-geneva05/anat/sub-geneva05_space-other_T2w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:03" + "Date": "2021-06-08 15:06:03", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-geneva05/dwi/sub-geneva05_rec-average_dwi_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-geneva05/dwi/sub-geneva05_rec-average_dwi_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-geneva05/dwi/sub-geneva05_rec-average_dwi_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-geneva06/anat/sub-geneva06_flip-1_mt-on_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-geneva06/anat/sub-geneva06_flip-1_mt-on_space-other_MTS_label-SC_seg.json index 943dd6d88d..943e2677f9 100644 --- a/derivatives/labels/sub-geneva06/anat/sub-geneva06_flip-1_mt-on_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-geneva06/anat/sub-geneva06_flip-1_mt-on_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:03" + "Date": "2021-06-08 15:06:03", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-geneva06/anat/sub-geneva06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-geneva06/anat/sub-geneva06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-geneva06/anat/sub-geneva06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-geneva06/anat/sub-geneva06_flip-2_mt-off_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-geneva06/anat/sub-geneva06_flip-2_mt-off_space-other_MTS_label-SC_seg.json index 494c56d8c9..a67e08df10 100644 --- a/derivatives/labels/sub-geneva06/anat/sub-geneva06_flip-2_mt-off_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-geneva06/anat/sub-geneva06_flip-2_mt-off_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Benjamin Carrier", - "Date": "2021-07-13 11:11:31" + "Date": "2021-07-13 11:11:31", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-geneva06/anat/sub-geneva06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-geneva06/anat/sub-geneva06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-geneva06/anat/sub-geneva06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-geneva06/anat/sub-geneva06_space-other_T1w_label-SC_seg.json b/derivatives/labels/sub-geneva06/anat/sub-geneva06_space-other_T1w_label-SC_seg.json index 6d3cb1d101..394eab1fbe 100644 --- a/derivatives/labels/sub-geneva06/anat/sub-geneva06_space-other_T1w_label-SC_seg.json +++ b/derivatives/labels/sub-geneva06/anat/sub-geneva06_space-other_T1w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Etienne Bergeron", - "Date": "2021-06-28 14:44:42" + "Date": "2021-06-28 14:44:42", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-geneva06/anat/sub-geneva06_space-other_T2star_label-SC_seg.json b/derivatives/labels/sub-geneva06/anat/sub-geneva06_space-other_T2star_label-SC_seg.json index 539fee423e..7a8f54b184 100644 --- a/derivatives/labels/sub-geneva06/anat/sub-geneva06_space-other_T2star_label-SC_seg.json +++ b/derivatives/labels/sub-geneva06/anat/sub-geneva06_space-other_T2star_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-07-16 09:37:03" + "Date": "2021-07-16 09:37:03", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-geneva06/anat/sub-geneva06_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-geneva06/anat/sub-geneva06_space-other_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-geneva06/anat/sub-geneva06_space-other_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-geneva06/anat/sub-geneva06_space-other_T2w_label-SC_seg.json b/derivatives/labels/sub-geneva06/anat/sub-geneva06_space-other_T2w_label-SC_seg.json index 36748f4d15..f50d5ab738 100644 --- a/derivatives/labels/sub-geneva06/anat/sub-geneva06_space-other_T2w_label-SC_seg.json +++ b/derivatives/labels/sub-geneva06/anat/sub-geneva06_space-other_T2w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Benjamin Carrier", - "Date": "2021-07-12 16:38:41" + "Date": "2021-07-12 16:38:41", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-geneva06/dwi/sub-geneva06_rec-average_dwi_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-geneva06/dwi/sub-geneva06_rec-average_dwi_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-geneva06/dwi/sub-geneva06_rec-average_dwi_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-hamburg01/anat/sub-hamburg01_flip-1_mt-on_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-hamburg01/anat/sub-hamburg01_flip-1_mt-on_space-other_MTS_label-SC_seg.json index 943dd6d88d..943e2677f9 100644 --- a/derivatives/labels/sub-hamburg01/anat/sub-hamburg01_flip-1_mt-on_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-hamburg01/anat/sub-hamburg01_flip-1_mt-on_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:03" + "Date": "2021-06-08 15:06:03", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-hamburg01/anat/sub-hamburg01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-hamburg01/anat/sub-hamburg01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-hamburg01/anat/sub-hamburg01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-hamburg01/anat/sub-hamburg01_flip-2_mt-off_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-hamburg01/anat/sub-hamburg01_flip-2_mt-off_space-other_MTS_label-SC_seg.json index a52ed4e54e..4f64c48396 100644 --- a/derivatives/labels/sub-hamburg01/anat/sub-hamburg01_flip-2_mt-off_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-hamburg01/anat/sub-hamburg01_flip-2_mt-off_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Benjamin Carrier", - "Date": "2021-07-12 16:32:21" + "Date": "2021-07-12 16:32:21", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-hamburg01/anat/sub-hamburg01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-hamburg01/anat/sub-hamburg01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-hamburg01/anat/sub-hamburg01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-hamburg01/anat/sub-hamburg01_space-other_T1w_label-SC_seg.json b/derivatives/labels/sub-hamburg01/anat/sub-hamburg01_space-other_T1w_label-SC_seg.json index e094b65c9f..d8ee2dea85 100644 --- a/derivatives/labels/sub-hamburg01/anat/sub-hamburg01_space-other_T1w_label-SC_seg.json +++ b/derivatives/labels/sub-hamburg01/anat/sub-hamburg01_space-other_T1w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Etienne Bergeron", - "Date": "2021-06-28 12:54:56" + "Date": "2021-06-28 12:54:56", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-hamburg01/anat/sub-hamburg01_space-other_T2star_label-SC_seg.json b/derivatives/labels/sub-hamburg01/anat/sub-hamburg01_space-other_T2star_label-SC_seg.json index 943dd6d88d..baef6a79d5 100644 --- a/derivatives/labels/sub-hamburg01/anat/sub-hamburg01_space-other_T2star_label-SC_seg.json +++ b/derivatives/labels/sub-hamburg01/anat/sub-hamburg01_space-other_T2star_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:03" + "Date": "2021-06-08 15:06:03", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-hamburg01/anat/sub-hamburg01_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-hamburg01/anat/sub-hamburg01_space-other_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-hamburg01/anat/sub-hamburg01_space-other_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-hamburg01/anat/sub-hamburg01_space-other_T2w_label-SC_seg.json b/derivatives/labels/sub-hamburg01/anat/sub-hamburg01_space-other_T2w_label-SC_seg.json index 772edf2f85..6df18edc88 100644 --- a/derivatives/labels/sub-hamburg01/anat/sub-hamburg01_space-other_T2w_label-SC_seg.json +++ b/derivatives/labels/sub-hamburg01/anat/sub-hamburg01_space-other_T2w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Etienne Bergeron", - "Date": "2021-06-28 16:06:23" + "Date": "2021-06-28 16:06:23", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-hamburg01/dwi/sub-hamburg01_rec-average_dwi_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-hamburg01/dwi/sub-hamburg01_rec-average_dwi_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-hamburg01/dwi/sub-hamburg01_rec-average_dwi_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-hamburg02/anat/sub-hamburg02_flip-1_mt-on_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-hamburg02/anat/sub-hamburg02_flip-1_mt-on_space-other_MTS_label-SC_seg.json index cd39642960..8ec3893c60 100644 --- a/derivatives/labels/sub-hamburg02/anat/sub-hamburg02_flip-1_mt-on_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-hamburg02/anat/sub-hamburg02_flip-1_mt-on_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Benjamin Carrier", - "Date": "2021-07-13 11:21:05" + "Date": "2021-07-13 11:21:05", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-hamburg02/anat/sub-hamburg02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-hamburg02/anat/sub-hamburg02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-hamburg02/anat/sub-hamburg02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-hamburg02/anat/sub-hamburg02_flip-2_mt-off_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-hamburg02/anat/sub-hamburg02_flip-2_mt-off_space-other_MTS_label-SC_seg.json index 605ac3c790..f029ac7691 100644 --- a/derivatives/labels/sub-hamburg02/anat/sub-hamburg02_flip-2_mt-off_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-hamburg02/anat/sub-hamburg02_flip-2_mt-off_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Benjamin Carrier", - "Date": "2021-07-12 16:36:16" + "Date": "2021-07-12 16:36:16", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-hamburg02/anat/sub-hamburg02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-hamburg02/anat/sub-hamburg02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-hamburg02/anat/sub-hamburg02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-hamburg02/anat/sub-hamburg02_space-other_T1w_label-SC_seg.json b/derivatives/labels/sub-hamburg02/anat/sub-hamburg02_space-other_T1w_label-SC_seg.json index b380625030..3db8c7f76b 100644 --- a/derivatives/labels/sub-hamburg02/anat/sub-hamburg02_space-other_T1w_label-SC_seg.json +++ b/derivatives/labels/sub-hamburg02/anat/sub-hamburg02_space-other_T1w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Etienne Bergeron", - "Date": "2021-06-28 13:17:17" + "Date": "2021-06-28 13:17:17", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-hamburg02/anat/sub-hamburg02_space-other_T2star_label-SC_seg.json b/derivatives/labels/sub-hamburg02/anat/sub-hamburg02_space-other_T2star_label-SC_seg.json index 943dd6d88d..baef6a79d5 100644 --- a/derivatives/labels/sub-hamburg02/anat/sub-hamburg02_space-other_T2star_label-SC_seg.json +++ b/derivatives/labels/sub-hamburg02/anat/sub-hamburg02_space-other_T2star_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:03" + "Date": "2021-06-08 15:06:03", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-hamburg02/anat/sub-hamburg02_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-hamburg02/anat/sub-hamburg02_space-other_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-hamburg02/anat/sub-hamburg02_space-other_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-hamburg02/anat/sub-hamburg02_space-other_T2w_label-SC_seg.json b/derivatives/labels/sub-hamburg02/anat/sub-hamburg02_space-other_T2w_label-SC_seg.json index 5012ebda80..6d3fb6e202 100644 --- a/derivatives/labels/sub-hamburg02/anat/sub-hamburg02_space-other_T2w_label-SC_seg.json +++ b/derivatives/labels/sub-hamburg02/anat/sub-hamburg02_space-other_T2w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Etienne Bergeron", - "Date": "2021-06-28 16:09:52" + "Date": "2021-06-28 16:09:52", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-hamburg02/dwi/sub-hamburg02_rec-average_dwi_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-hamburg02/dwi/sub-hamburg02_rec-average_dwi_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-hamburg02/dwi/sub-hamburg02_rec-average_dwi_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-hamburg03/anat/sub-hamburg03_flip-1_mt-on_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-hamburg03/anat/sub-hamburg03_flip-1_mt-on_space-other_MTS_label-SC_seg.json index 1ee544a828..c3c2352b30 100644 --- a/derivatives/labels/sub-hamburg03/anat/sub-hamburg03_flip-1_mt-on_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-hamburg03/anat/sub-hamburg03_flip-1_mt-on_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Benjamin Carrier", - "Date": "2021-07-13 11:09:02" + "Date": "2021-07-13 11:09:02", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-hamburg03/anat/sub-hamburg03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-hamburg03/anat/sub-hamburg03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-hamburg03/anat/sub-hamburg03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-hamburg03/anat/sub-hamburg03_flip-2_mt-off_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-hamburg03/anat/sub-hamburg03_flip-2_mt-off_space-other_MTS_label-SC_seg.json index 359a4d364f..23f92d5310 100644 --- a/derivatives/labels/sub-hamburg03/anat/sub-hamburg03_flip-2_mt-off_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-hamburg03/anat/sub-hamburg03_flip-2_mt-off_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Benjamin Carrier", - "Date": "2021-07-12 12:33:15" + "Date": "2021-07-12 12:33:15", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-hamburg03/anat/sub-hamburg03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-hamburg03/anat/sub-hamburg03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-hamburg03/anat/sub-hamburg03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-hamburg03/anat/sub-hamburg03_space-other_T1w_label-SC_seg.json b/derivatives/labels/sub-hamburg03/anat/sub-hamburg03_space-other_T1w_label-SC_seg.json index 973275df7a..9edf8648cd 100644 --- a/derivatives/labels/sub-hamburg03/anat/sub-hamburg03_space-other_T1w_label-SC_seg.json +++ b/derivatives/labels/sub-hamburg03/anat/sub-hamburg03_space-other_T1w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Etienne Bergeron", - "Date": "2021-06-28 12:52:26" + "Date": "2021-06-28 12:52:26", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-hamburg03/anat/sub-hamburg03_space-other_T2star_label-SC_seg.json b/derivatives/labels/sub-hamburg03/anat/sub-hamburg03_space-other_T2star_label-SC_seg.json index 943dd6d88d..baef6a79d5 100644 --- a/derivatives/labels/sub-hamburg03/anat/sub-hamburg03_space-other_T2star_label-SC_seg.json +++ b/derivatives/labels/sub-hamburg03/anat/sub-hamburg03_space-other_T2star_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:03" + "Date": "2021-06-08 15:06:03", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-hamburg03/anat/sub-hamburg03_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-hamburg03/anat/sub-hamburg03_space-other_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-hamburg03/anat/sub-hamburg03_space-other_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-hamburg03/anat/sub-hamburg03_space-other_T2w_label-SC_seg.json b/derivatives/labels/sub-hamburg03/anat/sub-hamburg03_space-other_T2w_label-SC_seg.json index 943dd6d88d..00856cf86b 100644 --- a/derivatives/labels/sub-hamburg03/anat/sub-hamburg03_space-other_T2w_label-SC_seg.json +++ b/derivatives/labels/sub-hamburg03/anat/sub-hamburg03_space-other_T2w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:03" + "Date": "2021-06-08 15:06:03", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-hamburg03/dwi/sub-hamburg03_rec-average_dwi_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-hamburg03/dwi/sub-hamburg03_rec-average_dwi_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-hamburg03/dwi/sub-hamburg03_rec-average_dwi_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-hamburg04/anat/sub-hamburg04_flip-1_mt-on_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-hamburg04/anat/sub-hamburg04_flip-1_mt-on_space-other_MTS_label-SC_seg.json index 0bab823721..61d1c6e094 100644 --- a/derivatives/labels/sub-hamburg04/anat/sub-hamburg04_flip-1_mt-on_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-hamburg04/anat/sub-hamburg04_flip-1_mt-on_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Benjamin Carrier", - "Date": "2021-07-13 11:05:41" + "Date": "2021-07-13 11:05:41", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-hamburg04/anat/sub-hamburg04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-hamburg04/anat/sub-hamburg04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-hamburg04/anat/sub-hamburg04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-hamburg04/anat/sub-hamburg04_flip-2_mt-off_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-hamburg04/anat/sub-hamburg04_flip-2_mt-off_space-other_MTS_label-SC_seg.json index 3a36797e8e..61337e7f6f 100644 --- a/derivatives/labels/sub-hamburg04/anat/sub-hamburg04_flip-2_mt-off_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-hamburg04/anat/sub-hamburg04_flip-2_mt-off_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Benjamin Carrier", - "Date": "2021-07-12 16:30:38" + "Date": "2021-07-12 16:30:38", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-hamburg04/anat/sub-hamburg04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-hamburg04/anat/sub-hamburg04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-hamburg04/anat/sub-hamburg04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-hamburg04/anat/sub-hamburg04_space-other_T1w_label-SC_seg.json b/derivatives/labels/sub-hamburg04/anat/sub-hamburg04_space-other_T1w_label-SC_seg.json index 63e399beac..062d2eed40 100644 --- a/derivatives/labels/sub-hamburg04/anat/sub-hamburg04_space-other_T1w_label-SC_seg.json +++ b/derivatives/labels/sub-hamburg04/anat/sub-hamburg04_space-other_T1w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Etienne Bergeron", - "Date": "2021-06-28 13:18:32" + "Date": "2021-06-28 13:18:32", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-hamburg04/anat/sub-hamburg04_space-other_T2star_label-SC_seg.json b/derivatives/labels/sub-hamburg04/anat/sub-hamburg04_space-other_T2star_label-SC_seg.json index 943dd6d88d..baef6a79d5 100644 --- a/derivatives/labels/sub-hamburg04/anat/sub-hamburg04_space-other_T2star_label-SC_seg.json +++ b/derivatives/labels/sub-hamburg04/anat/sub-hamburg04_space-other_T2star_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:03" + "Date": "2021-06-08 15:06:03", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-hamburg04/anat/sub-hamburg04_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-hamburg04/anat/sub-hamburg04_space-other_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-hamburg04/anat/sub-hamburg04_space-other_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-hamburg04/anat/sub-hamburg04_space-other_T2w_label-SC_seg.json b/derivatives/labels/sub-hamburg04/anat/sub-hamburg04_space-other_T2w_label-SC_seg.json index 943dd6d88d..00856cf86b 100644 --- a/derivatives/labels/sub-hamburg04/anat/sub-hamburg04_space-other_T2w_label-SC_seg.json +++ b/derivatives/labels/sub-hamburg04/anat/sub-hamburg04_space-other_T2w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:03" + "Date": "2021-06-08 15:06:03", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-hamburg04/dwi/sub-hamburg04_rec-average_dwi_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-hamburg04/dwi/sub-hamburg04_rec-average_dwi_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-hamburg04/dwi/sub-hamburg04_rec-average_dwi_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-hamburg05/anat/sub-hamburg05_flip-1_mt-on_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-hamburg05/anat/sub-hamburg05_flip-1_mt-on_space-other_MTS_label-SC_seg.json index 0151abd555..13ec812b64 100644 --- a/derivatives/labels/sub-hamburg05/anat/sub-hamburg05_flip-1_mt-on_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-hamburg05/anat/sub-hamburg05_flip-1_mt-on_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Benjamin Carrier", - "Date": "2021-07-13 11:15:42" + "Date": "2021-07-13 11:15:42", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-hamburg05/anat/sub-hamburg05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-hamburg05/anat/sub-hamburg05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-hamburg05/anat/sub-hamburg05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-hamburg05/anat/sub-hamburg05_flip-2_mt-off_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-hamburg05/anat/sub-hamburg05_flip-2_mt-off_space-other_MTS_label-SC_seg.json index 7d0ff826fd..26e64ac461 100644 --- a/derivatives/labels/sub-hamburg05/anat/sub-hamburg05_flip-2_mt-off_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-hamburg05/anat/sub-hamburg05_flip-2_mt-off_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Benjamin Carrier", - "Date": "2021-07-12 16:34:23" + "Date": "2021-07-12 16:34:23", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-hamburg05/anat/sub-hamburg05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-hamburg05/anat/sub-hamburg05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-hamburg05/anat/sub-hamburg05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-hamburg05/anat/sub-hamburg05_space-other_T1w_label-SC_seg.json b/derivatives/labels/sub-hamburg05/anat/sub-hamburg05_space-other_T1w_label-SC_seg.json index 33c47203cd..2e2eba0f20 100644 --- a/derivatives/labels/sub-hamburg05/anat/sub-hamburg05_space-other_T1w_label-SC_seg.json +++ b/derivatives/labels/sub-hamburg05/anat/sub-hamburg05_space-other_T1w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Etienne Bergeron", - "Date": "2021-06-28 12:49:21" + "Date": "2021-06-28 12:49:21", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-hamburg05/anat/sub-hamburg05_space-other_T2star_label-SC_seg.json b/derivatives/labels/sub-hamburg05/anat/sub-hamburg05_space-other_T2star_label-SC_seg.json index 34798dbab3..f16cf73c39 100644 --- a/derivatives/labels/sub-hamburg05/anat/sub-hamburg05_space-other_T2star_label-SC_seg.json +++ b/derivatives/labels/sub-hamburg05/anat/sub-hamburg05_space-other_T2star_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:04" + "Date": "2021-06-08 15:06:04", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-hamburg05/anat/sub-hamburg05_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-hamburg05/anat/sub-hamburg05_space-other_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-hamburg05/anat/sub-hamburg05_space-other_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-hamburg05/anat/sub-hamburg05_space-other_T2w_label-SC_seg.json b/derivatives/labels/sub-hamburg05/anat/sub-hamburg05_space-other_T2w_label-SC_seg.json index ca039e9bf5..70e4ea8421 100644 --- a/derivatives/labels/sub-hamburg05/anat/sub-hamburg05_space-other_T2w_label-SC_seg.json +++ b/derivatives/labels/sub-hamburg05/anat/sub-hamburg05_space-other_T2w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Etienne Bergeron", - "Date": "2021-06-28 16:01:12" + "Date": "2021-06-28 16:01:12", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-hamburg05/dwi/sub-hamburg05_rec-average_dwi_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-hamburg05/dwi/sub-hamburg05_rec-average_dwi_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-hamburg05/dwi/sub-hamburg05_rec-average_dwi_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-hamburg06/anat/sub-hamburg06_flip-1_mt-on_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-hamburg06/anat/sub-hamburg06_flip-1_mt-on_space-other_MTS_label-SC_seg.json index 34798dbab3..a930d89918 100644 --- a/derivatives/labels/sub-hamburg06/anat/sub-hamburg06_flip-1_mt-on_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-hamburg06/anat/sub-hamburg06_flip-1_mt-on_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:04" + "Date": "2021-06-08 15:06:04", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-hamburg06/anat/sub-hamburg06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-hamburg06/anat/sub-hamburg06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-hamburg06/anat/sub-hamburg06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-hamburg06/anat/sub-hamburg06_flip-2_mt-off_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-hamburg06/anat/sub-hamburg06_flip-2_mt-off_space-other_MTS_label-SC_seg.json index 34798dbab3..a930d89918 100644 --- a/derivatives/labels/sub-hamburg06/anat/sub-hamburg06_flip-2_mt-off_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-hamburg06/anat/sub-hamburg06_flip-2_mt-off_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:04" + "Date": "2021-06-08 15:06:04", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-hamburg06/anat/sub-hamburg06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-hamburg06/anat/sub-hamburg06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-hamburg06/anat/sub-hamburg06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-hamburg06/anat/sub-hamburg06_space-other_T1w_label-SC_seg.json b/derivatives/labels/sub-hamburg06/anat/sub-hamburg06_space-other_T1w_label-SC_seg.json index d6fb80c66e..1da7a3731b 100644 --- a/derivatives/labels/sub-hamburg06/anat/sub-hamburg06_space-other_T1w_label-SC_seg.json +++ b/derivatives/labels/sub-hamburg06/anat/sub-hamburg06_space-other_T1w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Etienne Bergeron", - "Date": "2021-06-28 13:22:57" + "Date": "2021-06-28 13:22:57", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-hamburg06/anat/sub-hamburg06_space-other_T2star_label-SC_seg.json b/derivatives/labels/sub-hamburg06/anat/sub-hamburg06_space-other_T2star_label-SC_seg.json index 34798dbab3..f16cf73c39 100644 --- a/derivatives/labels/sub-hamburg06/anat/sub-hamburg06_space-other_T2star_label-SC_seg.json +++ b/derivatives/labels/sub-hamburg06/anat/sub-hamburg06_space-other_T2star_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:04" + "Date": "2021-06-08 15:06:04", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-hamburg06/anat/sub-hamburg06_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-hamburg06/anat/sub-hamburg06_space-other_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-hamburg06/anat/sub-hamburg06_space-other_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-hamburg06/anat/sub-hamburg06_space-other_T2w_label-SC_seg.json b/derivatives/labels/sub-hamburg06/anat/sub-hamburg06_space-other_T2w_label-SC_seg.json index 0980f723a4..1d52c292eb 100644 --- a/derivatives/labels/sub-hamburg06/anat/sub-hamburg06_space-other_T2w_label-SC_seg.json +++ b/derivatives/labels/sub-hamburg06/anat/sub-hamburg06_space-other_T2w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Benjamin Carrier", - "Date": "2021-07-12 12:17:31" + "Date": "2021-07-12 12:17:31", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-hamburg06/dwi/sub-hamburg06_rec-average_dwi_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-hamburg06/dwi/sub-hamburg06_rec-average_dwi_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-hamburg06/dwi/sub-hamburg06_rec-average_dwi_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-juntendo750w01/anat/sub-juntendo750w01_flip-1_mt-on_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-juntendo750w01/anat/sub-juntendo750w01_flip-1_mt-on_space-other_MTS_label-SC_seg.json index 34798dbab3..a930d89918 100644 --- a/derivatives/labels/sub-juntendo750w01/anat/sub-juntendo750w01_flip-1_mt-on_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-juntendo750w01/anat/sub-juntendo750w01_flip-1_mt-on_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:04" + "Date": "2021-06-08 15:06:04", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-juntendo750w01/anat/sub-juntendo750w01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-juntendo750w01/anat/sub-juntendo750w01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-juntendo750w01/anat/sub-juntendo750w01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-juntendo750w01/anat/sub-juntendo750w01_flip-2_mt-off_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-juntendo750w01/anat/sub-juntendo750w01_flip-2_mt-off_space-other_MTS_label-SC_seg.json index 34798dbab3..a930d89918 100644 --- a/derivatives/labels/sub-juntendo750w01/anat/sub-juntendo750w01_flip-2_mt-off_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-juntendo750w01/anat/sub-juntendo750w01_flip-2_mt-off_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:04" + "Date": "2021-06-08 15:06:04", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-juntendo750w01/anat/sub-juntendo750w01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-juntendo750w01/anat/sub-juntendo750w01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-juntendo750w01/anat/sub-juntendo750w01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-juntendo750w01/anat/sub-juntendo750w01_space-other_T1w_label-SC_seg.json b/derivatives/labels/sub-juntendo750w01/anat/sub-juntendo750w01_space-other_T1w_label-SC_seg.json index 5a4cf0a027..aa7b6951c2 100644 --- a/derivatives/labels/sub-juntendo750w01/anat/sub-juntendo750w01_space-other_T1w_label-SC_seg.json +++ b/derivatives/labels/sub-juntendo750w01/anat/sub-juntendo750w01_space-other_T1w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Etienne Bergeron", - "Date": "2021-06-28 15:42:47" + "Date": "2021-06-28 15:42:47", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-juntendo750w01/anat/sub-juntendo750w01_space-other_T2star_label-SC_seg.json b/derivatives/labels/sub-juntendo750w01/anat/sub-juntendo750w01_space-other_T2star_label-SC_seg.json index 34798dbab3..f16cf73c39 100644 --- a/derivatives/labels/sub-juntendo750w01/anat/sub-juntendo750w01_space-other_T2star_label-SC_seg.json +++ b/derivatives/labels/sub-juntendo750w01/anat/sub-juntendo750w01_space-other_T2star_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:04" + "Date": "2021-06-08 15:06:04", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-juntendo750w01/anat/sub-juntendo750w01_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-juntendo750w01/anat/sub-juntendo750w01_space-other_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-juntendo750w01/anat/sub-juntendo750w01_space-other_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-juntendo750w01/anat/sub-juntendo750w01_space-other_T2w_label-SC_seg.json b/derivatives/labels/sub-juntendo750w01/anat/sub-juntendo750w01_space-other_T2w_label-SC_seg.json index af1fe18a2c..c027dfb6ae 100644 --- a/derivatives/labels/sub-juntendo750w01/anat/sub-juntendo750w01_space-other_T2w_label-SC_seg.json +++ b/derivatives/labels/sub-juntendo750w01/anat/sub-juntendo750w01_space-other_T2w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Benjamin Carrier", - "Date": "2021-07-13 11:35:21" + "Date": "2021-07-13 11:35:21", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-juntendo750w01/dwi/sub-juntendo750w01_rec-average_dwi_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-juntendo750w01/dwi/sub-juntendo750w01_rec-average_dwi_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-juntendo750w01/dwi/sub-juntendo750w01_rec-average_dwi_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-juntendo750w02/anat/sub-juntendo750w02_flip-1_mt-on_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-juntendo750w02/anat/sub-juntendo750w02_flip-1_mt-on_space-other_MTS_label-SC_seg.json index d720cc57a3..8854c82532 100644 --- a/derivatives/labels/sub-juntendo750w02/anat/sub-juntendo750w02_flip-1_mt-on_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-juntendo750w02/anat/sub-juntendo750w02_flip-1_mt-on_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Benjamin Carrier", - "Date": "2021-07-13 16:30:44" + "Date": "2021-07-13 16:30:44", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-juntendo750w02/anat/sub-juntendo750w02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-juntendo750w02/anat/sub-juntendo750w02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-juntendo750w02/anat/sub-juntendo750w02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-juntendo750w02/anat/sub-juntendo750w02_flip-2_mt-off_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-juntendo750w02/anat/sub-juntendo750w02_flip-2_mt-off_space-other_MTS_label-SC_seg.json index 34798dbab3..a930d89918 100644 --- a/derivatives/labels/sub-juntendo750w02/anat/sub-juntendo750w02_flip-2_mt-off_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-juntendo750w02/anat/sub-juntendo750w02_flip-2_mt-off_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:04" + "Date": "2021-06-08 15:06:04", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-juntendo750w02/anat/sub-juntendo750w02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-juntendo750w02/anat/sub-juntendo750w02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-juntendo750w02/anat/sub-juntendo750w02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-juntendo750w02/anat/sub-juntendo750w02_space-other_T1w_label-SC_seg.json b/derivatives/labels/sub-juntendo750w02/anat/sub-juntendo750w02_space-other_T1w_label-SC_seg.json index 552b87d198..7b7a85addd 100644 --- a/derivatives/labels/sub-juntendo750w02/anat/sub-juntendo750w02_space-other_T1w_label-SC_seg.json +++ b/derivatives/labels/sub-juntendo750w02/anat/sub-juntendo750w02_space-other_T1w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-03 10:35:15" + "Date": "2021-06-03 10:35:15", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-juntendo750w02/anat/sub-juntendo750w02_space-other_T2star_label-SC_seg.json b/derivatives/labels/sub-juntendo750w02/anat/sub-juntendo750w02_space-other_T2star_label-SC_seg.json index 34798dbab3..f16cf73c39 100644 --- a/derivatives/labels/sub-juntendo750w02/anat/sub-juntendo750w02_space-other_T2star_label-SC_seg.json +++ b/derivatives/labels/sub-juntendo750w02/anat/sub-juntendo750w02_space-other_T2star_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:04" + "Date": "2021-06-08 15:06:04", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-juntendo750w02/anat/sub-juntendo750w02_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-juntendo750w02/anat/sub-juntendo750w02_space-other_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-juntendo750w02/anat/sub-juntendo750w02_space-other_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-juntendo750w02/anat/sub-juntendo750w02_space-other_T2w_label-SC_seg.json b/derivatives/labels/sub-juntendo750w02/anat/sub-juntendo750w02_space-other_T2w_label-SC_seg.json index 501ae6435e..c5f2d55383 100644 --- a/derivatives/labels/sub-juntendo750w02/anat/sub-juntendo750w02_space-other_T2w_label-SC_seg.json +++ b/derivatives/labels/sub-juntendo750w02/anat/sub-juntendo750w02_space-other_T2w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Benjamin Carrier", - "Date": "2021-07-13 15:35:52" + "Date": "2021-07-13 15:35:52", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-juntendo750w02/dwi/sub-juntendo750w02_rec-average_dwi_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-juntendo750w02/dwi/sub-juntendo750w02_rec-average_dwi_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-juntendo750w02/dwi/sub-juntendo750w02_rec-average_dwi_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-juntendo750w03/anat/sub-juntendo750w03_flip-1_mt-on_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-juntendo750w03/anat/sub-juntendo750w03_flip-1_mt-on_space-other_MTS_label-SC_seg.json index d6ad85b2bc..23f80c289b 100644 --- a/derivatives/labels/sub-juntendo750w03/anat/sub-juntendo750w03_flip-1_mt-on_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-juntendo750w03/anat/sub-juntendo750w03_flip-1_mt-on_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Benjamin Carrier", - "Date": "2021-07-13 17:25:25" + "Date": "2021-07-13 17:25:25", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-juntendo750w03/anat/sub-juntendo750w03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-juntendo750w03/anat/sub-juntendo750w03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-juntendo750w03/anat/sub-juntendo750w03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-juntendo750w03/anat/sub-juntendo750w03_flip-2_mt-off_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-juntendo750w03/anat/sub-juntendo750w03_flip-2_mt-off_space-other_MTS_label-SC_seg.json index 73f546041e..25bff80658 100644 --- a/derivatives/labels/sub-juntendo750w03/anat/sub-juntendo750w03_flip-2_mt-off_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-juntendo750w03/anat/sub-juntendo750w03_flip-2_mt-off_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Benjamin Carrier", - "Date": "2021-07-13 17:09:11" + "Date": "2021-07-13 17:09:11", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-juntendo750w03/anat/sub-juntendo750w03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-juntendo750w03/anat/sub-juntendo750w03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-juntendo750w03/anat/sub-juntendo750w03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-juntendo750w03/anat/sub-juntendo750w03_space-other_T1w_label-SC_seg.json b/derivatives/labels/sub-juntendo750w03/anat/sub-juntendo750w03_space-other_T1w_label-SC_seg.json index 7753396c8e..798dc6786a 100644 --- a/derivatives/labels/sub-juntendo750w03/anat/sub-juntendo750w03_space-other_T1w_label-SC_seg.json +++ b/derivatives/labels/sub-juntendo750w03/anat/sub-juntendo750w03_space-other_T1w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-05 17:09:33" + "Date": "2022-10-05 17:09:33", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-juntendo750w03/anat/sub-juntendo750w03_space-other_T2star_label-SC_seg.json b/derivatives/labels/sub-juntendo750w03/anat/sub-juntendo750w03_space-other_T2star_label-SC_seg.json index 34798dbab3..f16cf73c39 100644 --- a/derivatives/labels/sub-juntendo750w03/anat/sub-juntendo750w03_space-other_T2star_label-SC_seg.json +++ b/derivatives/labels/sub-juntendo750w03/anat/sub-juntendo750w03_space-other_T2star_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:04" + "Date": "2021-06-08 15:06:04", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-juntendo750w03/anat/sub-juntendo750w03_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-juntendo750w03/anat/sub-juntendo750w03_space-other_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-juntendo750w03/anat/sub-juntendo750w03_space-other_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-juntendo750w03/anat/sub-juntendo750w03_space-other_T2w_label-SC_seg.json b/derivatives/labels/sub-juntendo750w03/anat/sub-juntendo750w03_space-other_T2w_label-SC_seg.json index 72f4efa158..6ea1d21508 100644 --- a/derivatives/labels/sub-juntendo750w03/anat/sub-juntendo750w03_space-other_T2w_label-SC_seg.json +++ b/derivatives/labels/sub-juntendo750w03/anat/sub-juntendo750w03_space-other_T2w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Benjamin Carrier", - "Date": "2021-07-13 16:32:14" + "Date": "2021-07-13 16:32:14", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-juntendo750w03/dwi/sub-juntendo750w03_rec-average_dwi_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-juntendo750w03/dwi/sub-juntendo750w03_rec-average_dwi_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-juntendo750w03/dwi/sub-juntendo750w03_rec-average_dwi_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-juntendo750w04/anat/sub-juntendo750w04_flip-1_mt-on_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-juntendo750w04/anat/sub-juntendo750w04_flip-1_mt-on_space-other_MTS_label-SC_seg.json index a47558fd25..574a561f8d 100644 --- a/derivatives/labels/sub-juntendo750w04/anat/sub-juntendo750w04_flip-1_mt-on_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-juntendo750w04/anat/sub-juntendo750w04_flip-1_mt-on_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Benjamin Carrier", - "Date": "2021-07-14 10:38:21" + "Date": "2021-07-14 10:38:21", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-juntendo750w04/anat/sub-juntendo750w04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-juntendo750w04/anat/sub-juntendo750w04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-juntendo750w04/anat/sub-juntendo750w04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-juntendo750w04/anat/sub-juntendo750w04_flip-2_mt-off_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-juntendo750w04/anat/sub-juntendo750w04_flip-2_mt-off_space-other_MTS_label-SC_seg.json index 34798dbab3..a930d89918 100644 --- a/derivatives/labels/sub-juntendo750w04/anat/sub-juntendo750w04_flip-2_mt-off_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-juntendo750w04/anat/sub-juntendo750w04_flip-2_mt-off_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:04" + "Date": "2021-06-08 15:06:04", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-juntendo750w04/anat/sub-juntendo750w04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-juntendo750w04/anat/sub-juntendo750w04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-juntendo750w04/anat/sub-juntendo750w04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-juntendo750w04/anat/sub-juntendo750w04_space-other_T1w_label-SC_seg.json b/derivatives/labels/sub-juntendo750w04/anat/sub-juntendo750w04_space-other_T1w_label-SC_seg.json index 72fca4ce93..d076348956 100644 --- a/derivatives/labels/sub-juntendo750w04/anat/sub-juntendo750w04_space-other_T1w_label-SC_seg.json +++ b/derivatives/labels/sub-juntendo750w04/anat/sub-juntendo750w04_space-other_T1w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Yassine El Bouchaibi", - "Date": "2021-07-08 23:13:33" + "Date": "2021-07-08 23:13:33", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-juntendo750w04/anat/sub-juntendo750w04_space-other_T2star_label-SC_seg.json b/derivatives/labels/sub-juntendo750w04/anat/sub-juntendo750w04_space-other_T2star_label-SC_seg.json index 34798dbab3..f16cf73c39 100644 --- a/derivatives/labels/sub-juntendo750w04/anat/sub-juntendo750w04_space-other_T2star_label-SC_seg.json +++ b/derivatives/labels/sub-juntendo750w04/anat/sub-juntendo750w04_space-other_T2star_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:04" + "Date": "2021-06-08 15:06:04", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-juntendo750w04/anat/sub-juntendo750w04_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-juntendo750w04/anat/sub-juntendo750w04_space-other_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-juntendo750w04/anat/sub-juntendo750w04_space-other_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-juntendo750w04/anat/sub-juntendo750w04_space-other_T2w_label-SC_seg.json b/derivatives/labels/sub-juntendo750w04/anat/sub-juntendo750w04_space-other_T2w_label-SC_seg.json index 8425113fb5..dee447721a 100644 --- a/derivatives/labels/sub-juntendo750w04/anat/sub-juntendo750w04_space-other_T2w_label-SC_seg.json +++ b/derivatives/labels/sub-juntendo750w04/anat/sub-juntendo750w04_space-other_T2w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Benjamin Carrier", - "Date": "2021-07-13 16:52:49" + "Date": "2021-07-13 16:52:49", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-juntendo750w04/dwi/sub-juntendo750w04_rec-average_dwi_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-juntendo750w04/dwi/sub-juntendo750w04_rec-average_dwi_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-juntendo750w04/dwi/sub-juntendo750w04_rec-average_dwi_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-juntendo750w05/anat/sub-juntendo750w05_flip-1_mt-on_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-juntendo750w05/anat/sub-juntendo750w05_flip-1_mt-on_space-other_MTS_label-SC_seg.json index f2dcc0327a..8b1b9dd2e3 100644 --- a/derivatives/labels/sub-juntendo750w05/anat/sub-juntendo750w05_flip-1_mt-on_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-juntendo750w05/anat/sub-juntendo750w05_flip-1_mt-on_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Benjamin Carrier", - "Date": "2021-07-14 10:55:28" + "Date": "2021-07-14 10:55:28", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-juntendo750w05/anat/sub-juntendo750w05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-juntendo750w05/anat/sub-juntendo750w05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-juntendo750w05/anat/sub-juntendo750w05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-juntendo750w05/anat/sub-juntendo750w05_flip-2_mt-off_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-juntendo750w05/anat/sub-juntendo750w05_flip-2_mt-off_space-other_MTS_label-SC_seg.json index 8dd8b335a6..f5f8184acd 100644 --- a/derivatives/labels/sub-juntendo750w05/anat/sub-juntendo750w05_flip-2_mt-off_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-juntendo750w05/anat/sub-juntendo750w05_flip-2_mt-off_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Benjamin Carrier", - "Date": "2021-07-13 17:17:02" + "Date": "2021-07-13 17:17:02", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-juntendo750w05/anat/sub-juntendo750w05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-juntendo750w05/anat/sub-juntendo750w05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-juntendo750w05/anat/sub-juntendo750w05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-juntendo750w05/anat/sub-juntendo750w05_space-other_T1w_label-SC_seg.json b/derivatives/labels/sub-juntendo750w05/anat/sub-juntendo750w05_space-other_T1w_label-SC_seg.json index 113a58823d..ed772c5e69 100644 --- a/derivatives/labels/sub-juntendo750w05/anat/sub-juntendo750w05_space-other_T1w_label-SC_seg.json +++ b/derivatives/labels/sub-juntendo750w05/anat/sub-juntendo750w05_space-other_T1w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Benjamin Carrier", - "Date": "2021-07-13 15:46:32" + "Date": "2021-07-13 15:46:32", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-juntendo750w05/anat/sub-juntendo750w05_space-other_T2star_label-SC_seg.json b/derivatives/labels/sub-juntendo750w05/anat/sub-juntendo750w05_space-other_T2star_label-SC_seg.json index 34798dbab3..f16cf73c39 100644 --- a/derivatives/labels/sub-juntendo750w05/anat/sub-juntendo750w05_space-other_T2star_label-SC_seg.json +++ b/derivatives/labels/sub-juntendo750w05/anat/sub-juntendo750w05_space-other_T2star_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:04" + "Date": "2021-06-08 15:06:04", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-juntendo750w05/anat/sub-juntendo750w05_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-juntendo750w05/anat/sub-juntendo750w05_space-other_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-juntendo750w05/anat/sub-juntendo750w05_space-other_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-juntendo750w05/anat/sub-juntendo750w05_space-other_T2w_label-SC_seg.json b/derivatives/labels/sub-juntendo750w05/anat/sub-juntendo750w05_space-other_T2w_label-SC_seg.json index 34798dbab3..658c73a512 100644 --- a/derivatives/labels/sub-juntendo750w05/anat/sub-juntendo750w05_space-other_T2w_label-SC_seg.json +++ b/derivatives/labels/sub-juntendo750w05/anat/sub-juntendo750w05_space-other_T2w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:04" + "Date": "2021-06-08 15:06:04", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-juntendo750w05/dwi/sub-juntendo750w05_rec-average_dwi_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-juntendo750w05/dwi/sub-juntendo750w05_rec-average_dwi_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-juntendo750w05/dwi/sub-juntendo750w05_rec-average_dwi_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-juntendo750w06/anat/sub-juntendo750w06_flip-1_mt-on_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-juntendo750w06/anat/sub-juntendo750w06_flip-1_mt-on_space-other_MTS_label-SC_seg.json index 60a94731cb..8b126a9fce 100644 --- a/derivatives/labels/sub-juntendo750w06/anat/sub-juntendo750w06_flip-1_mt-on_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-juntendo750w06/anat/sub-juntendo750w06_flip-1_mt-on_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-07-16 09:37:26" + "Date": "2021-07-16 09:37:26", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-juntendo750w06/anat/sub-juntendo750w06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-juntendo750w06/anat/sub-juntendo750w06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-juntendo750w06/anat/sub-juntendo750w06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-juntendo750w06/anat/sub-juntendo750w06_flip-2_mt-off_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-juntendo750w06/anat/sub-juntendo750w06_flip-2_mt-off_space-other_MTS_label-SC_seg.json index 34798dbab3..a930d89918 100644 --- a/derivatives/labels/sub-juntendo750w06/anat/sub-juntendo750w06_flip-2_mt-off_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-juntendo750w06/anat/sub-juntendo750w06_flip-2_mt-off_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:04" + "Date": "2021-06-08 15:06:04", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-juntendo750w06/anat/sub-juntendo750w06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-juntendo750w06/anat/sub-juntendo750w06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-juntendo750w06/anat/sub-juntendo750w06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-juntendo750w06/anat/sub-juntendo750w06_space-other_T1w_label-SC_seg.json b/derivatives/labels/sub-juntendo750w06/anat/sub-juntendo750w06_space-other_T1w_label-SC_seg.json index 8e23ad30be..dab1bf3184 100644 --- a/derivatives/labels/sub-juntendo750w06/anat/sub-juntendo750w06_space-other_T1w_label-SC_seg.json +++ b/derivatives/labels/sub-juntendo750w06/anat/sub-juntendo750w06_space-other_T1w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Yassine El Bouchaibi", - "Date": "2021-07-08 23:10:05" + "Date": "2021-07-08 23:10:05", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-juntendo750w06/anat/sub-juntendo750w06_space-other_T2star_label-SC_seg.json b/derivatives/labels/sub-juntendo750w06/anat/sub-juntendo750w06_space-other_T2star_label-SC_seg.json index 1b5fd45c03..2ad2318716 100644 --- a/derivatives/labels/sub-juntendo750w06/anat/sub-juntendo750w06_space-other_T2star_label-SC_seg.json +++ b/derivatives/labels/sub-juntendo750w06/anat/sub-juntendo750w06_space-other_T2star_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:05" + "Date": "2021-06-08 15:06:05", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-juntendo750w06/anat/sub-juntendo750w06_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-juntendo750w06/anat/sub-juntendo750w06_space-other_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-juntendo750w06/anat/sub-juntendo750w06_space-other_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-juntendo750w06/anat/sub-juntendo750w06_space-other_T2w_label-SC_seg.json b/derivatives/labels/sub-juntendo750w06/anat/sub-juntendo750w06_space-other_T2w_label-SC_seg.json index d951a2d802..42bf33fb9b 100644 --- a/derivatives/labels/sub-juntendo750w06/anat/sub-juntendo750w06_space-other_T2w_label-SC_seg.json +++ b/derivatives/labels/sub-juntendo750w06/anat/sub-juntendo750w06_space-other_T2w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Benjamin Carrier", - "Date": "2021-07-13 16:42:08" + "Date": "2021-07-13 16:42:08", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-juntendo750w06/dwi/sub-juntendo750w06_rec-average_dwi_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-juntendo750w06/dwi/sub-juntendo750w06_rec-average_dwi_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-juntendo750w06/dwi/sub-juntendo750w06_rec-average_dwi_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-mgh01/anat/sub-mgh01_flip-1_mt-on_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-mgh01/anat/sub-mgh01_flip-1_mt-on_space-other_MTS_label-SC_seg.json index 4e07661794..896adc7ed8 100644 --- a/derivatives/labels/sub-mgh01/anat/sub-mgh01_flip-1_mt-on_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-mgh01/anat/sub-mgh01_flip-1_mt-on_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Benjamin Carrier", - "Date": "2021-07-13 17:11:34" + "Date": "2021-07-13 17:11:34", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-mgh01/anat/sub-mgh01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-mgh01/anat/sub-mgh01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-mgh01/anat/sub-mgh01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-mgh01/anat/sub-mgh01_flip-2_mt-off_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-mgh01/anat/sub-mgh01_flip-2_mt-off_space-other_MTS_label-SC_seg.json index 970574983e..9e52495f3c 100644 --- a/derivatives/labels/sub-mgh01/anat/sub-mgh01_flip-2_mt-off_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-mgh01/anat/sub-mgh01_flip-2_mt-off_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Benjamin Carrier", - "Date": "2021-07-13 16:41:04" + "Date": "2021-07-13 16:41:04", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-mgh01/anat/sub-mgh01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-mgh01/anat/sub-mgh01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-mgh01/anat/sub-mgh01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-mgh01/anat/sub-mgh01_space-other_T1w_label-SC_seg.json b/derivatives/labels/sub-mgh01/anat/sub-mgh01_space-other_T1w_label-SC_seg.json index fd5f27bb55..9e6eef4101 100644 --- a/derivatives/labels/sub-mgh01/anat/sub-mgh01_space-other_T1w_label-SC_seg.json +++ b/derivatives/labels/sub-mgh01/anat/sub-mgh01_space-other_T1w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Benjamin Carrier", - "Date": "2021-07-13 15:30:49" + "Date": "2021-07-13 15:30:49", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-mgh01/anat/sub-mgh01_space-other_T2star_label-SC_seg.json b/derivatives/labels/sub-mgh01/anat/sub-mgh01_space-other_T2star_label-SC_seg.json index 1b5fd45c03..2ad2318716 100644 --- a/derivatives/labels/sub-mgh01/anat/sub-mgh01_space-other_T2star_label-SC_seg.json +++ b/derivatives/labels/sub-mgh01/anat/sub-mgh01_space-other_T2star_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:05" + "Date": "2021-06-08 15:06:05", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-mgh01/anat/sub-mgh01_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-mgh01/anat/sub-mgh01_space-other_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-mgh01/anat/sub-mgh01_space-other_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-mgh01/anat/sub-mgh01_space-other_T2w_label-SC_seg.json b/derivatives/labels/sub-mgh01/anat/sub-mgh01_space-other_T2w_label-SC_seg.json index 1b5fd45c03..16ef5ab3e9 100644 --- a/derivatives/labels/sub-mgh01/anat/sub-mgh01_space-other_T2w_label-SC_seg.json +++ b/derivatives/labels/sub-mgh01/anat/sub-mgh01_space-other_T2w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:05" + "Date": "2021-06-08 15:06:05", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-mgh01/dwi/sub-mgh01_rec-average_dwi_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-mgh01/dwi/sub-mgh01_rec-average_dwi_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-mgh01/dwi/sub-mgh01_rec-average_dwi_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-mgh02/anat/sub-mgh02_flip-1_mt-on_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-mgh02/anat/sub-mgh02_flip-1_mt-on_space-other_MTS_label-SC_seg.json index e2f7332a53..4adbfe2626 100644 --- a/derivatives/labels/sub-mgh02/anat/sub-mgh02_flip-1_mt-on_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-mgh02/anat/sub-mgh02_flip-1_mt-on_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Benjamin Carrier", - "Date": "2021-07-14 11:39:23" + "Date": "2021-07-14 11:39:23", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-mgh02/anat/sub-mgh02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-mgh02/anat/sub-mgh02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-mgh02/anat/sub-mgh02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-mgh02/anat/sub-mgh02_flip-2_mt-off_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-mgh02/anat/sub-mgh02_flip-2_mt-off_space-other_MTS_label-SC_seg.json index 199dfcb488..d225f8845c 100644 --- a/derivatives/labels/sub-mgh02/anat/sub-mgh02_flip-2_mt-off_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-mgh02/anat/sub-mgh02_flip-2_mt-off_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Benjamin Carrier", - "Date": "2021-07-14 11:26:06" + "Date": "2021-07-14 11:26:06", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-mgh02/anat/sub-mgh02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-mgh02/anat/sub-mgh02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-mgh02/anat/sub-mgh02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-mgh02/anat/sub-mgh02_space-other_T1w_label-SC_seg.json b/derivatives/labels/sub-mgh02/anat/sub-mgh02_space-other_T1w_label-SC_seg.json index f456b580ca..37cdd73052 100644 --- a/derivatives/labels/sub-mgh02/anat/sub-mgh02_space-other_T1w_label-SC_seg.json +++ b/derivatives/labels/sub-mgh02/anat/sub-mgh02_space-other_T1w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Benjamin Carrier", - "Date": "2021-07-13 15:55:42" + "Date": "2021-07-13 15:55:42", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-mgh02/anat/sub-mgh02_space-other_T2star_label-SC_seg.json b/derivatives/labels/sub-mgh02/anat/sub-mgh02_space-other_T2star_label-SC_seg.json index 1b5fd45c03..2ad2318716 100644 --- a/derivatives/labels/sub-mgh02/anat/sub-mgh02_space-other_T2star_label-SC_seg.json +++ b/derivatives/labels/sub-mgh02/anat/sub-mgh02_space-other_T2star_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:05" + "Date": "2021-06-08 15:06:05", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-mgh02/anat/sub-mgh02_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-mgh02/anat/sub-mgh02_space-other_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-mgh02/anat/sub-mgh02_space-other_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-mgh02/anat/sub-mgh02_space-other_T2w_label-SC_seg.json b/derivatives/labels/sub-mgh02/anat/sub-mgh02_space-other_T2w_label-SC_seg.json index 1b5fd45c03..16ef5ab3e9 100644 --- a/derivatives/labels/sub-mgh02/anat/sub-mgh02_space-other_T2w_label-SC_seg.json +++ b/derivatives/labels/sub-mgh02/anat/sub-mgh02_space-other_T2w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:05" + "Date": "2021-06-08 15:06:05", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-mgh02/dwi/sub-mgh02_rec-average_dwi_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-mgh02/dwi/sub-mgh02_rec-average_dwi_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-mgh02/dwi/sub-mgh02_rec-average_dwi_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-mgh03/anat/sub-mgh03_flip-1_mt-on_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-mgh03/anat/sub-mgh03_flip-1_mt-on_space-other_MTS_label-SC_seg.json index 1b5fd45c03..5741e5c920 100644 --- a/derivatives/labels/sub-mgh03/anat/sub-mgh03_flip-1_mt-on_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-mgh03/anat/sub-mgh03_flip-1_mt-on_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:05" + "Date": "2021-06-08 15:06:05", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-mgh03/anat/sub-mgh03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-mgh03/anat/sub-mgh03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-mgh03/anat/sub-mgh03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-mgh03/anat/sub-mgh03_flip-2_mt-off_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-mgh03/anat/sub-mgh03_flip-2_mt-off_space-other_MTS_label-SC_seg.json index 743e56ada5..4e8d82abfc 100644 --- a/derivatives/labels/sub-mgh03/anat/sub-mgh03_flip-2_mt-off_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-mgh03/anat/sub-mgh03_flip-2_mt-off_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Benjamin Carrier", - "Date": "2021-07-14 11:35:33" + "Date": "2021-07-14 11:35:33", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-mgh03/anat/sub-mgh03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-mgh03/anat/sub-mgh03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-mgh03/anat/sub-mgh03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-mgh03/anat/sub-mgh03_space-other_T1w_label-SC_seg.json b/derivatives/labels/sub-mgh03/anat/sub-mgh03_space-other_T1w_label-SC_seg.json index c57226ed0b..b8a70c8751 100644 --- a/derivatives/labels/sub-mgh03/anat/sub-mgh03_space-other_T1w_label-SC_seg.json +++ b/derivatives/labels/sub-mgh03/anat/sub-mgh03_space-other_T1w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Benjamin Carrier", - "Date": "2021-07-13 16:17:54" + "Date": "2021-07-13 16:17:54", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-mgh03/anat/sub-mgh03_space-other_T2star_label-SC_seg.json b/derivatives/labels/sub-mgh03/anat/sub-mgh03_space-other_T2star_label-SC_seg.json index 1b5fd45c03..2ad2318716 100644 --- a/derivatives/labels/sub-mgh03/anat/sub-mgh03_space-other_T2star_label-SC_seg.json +++ b/derivatives/labels/sub-mgh03/anat/sub-mgh03_space-other_T2star_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:05" + "Date": "2021-06-08 15:06:05", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-mgh03/anat/sub-mgh03_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-mgh03/anat/sub-mgh03_space-other_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-mgh03/anat/sub-mgh03_space-other_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-mgh03/anat/sub-mgh03_space-other_T2w_label-SC_seg.json b/derivatives/labels/sub-mgh03/anat/sub-mgh03_space-other_T2w_label-SC_seg.json index 1b5fd45c03..16ef5ab3e9 100644 --- a/derivatives/labels/sub-mgh03/anat/sub-mgh03_space-other_T2w_label-SC_seg.json +++ b/derivatives/labels/sub-mgh03/anat/sub-mgh03_space-other_T2w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:05" + "Date": "2021-06-08 15:06:05", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-mgh03/dwi/sub-mgh03_rec-average_dwi_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-mgh03/dwi/sub-mgh03_rec-average_dwi_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-mgh03/dwi/sub-mgh03_rec-average_dwi_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-mgh04/anat/sub-mgh04_flip-1_mt-on_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-mgh04/anat/sub-mgh04_flip-1_mt-on_space-other_MTS_label-SC_seg.json index 1b5fd45c03..5741e5c920 100644 --- a/derivatives/labels/sub-mgh04/anat/sub-mgh04_flip-1_mt-on_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-mgh04/anat/sub-mgh04_flip-1_mt-on_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:05" + "Date": "2021-06-08 15:06:05", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-mgh04/anat/sub-mgh04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-mgh04/anat/sub-mgh04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-mgh04/anat/sub-mgh04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-mgh04/anat/sub-mgh04_flip-2_mt-off_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-mgh04/anat/sub-mgh04_flip-2_mt-off_space-other_MTS_label-SC_seg.json index 2157e077e1..08a82c9360 100644 --- a/derivatives/labels/sub-mgh04/anat/sub-mgh04_flip-2_mt-off_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-mgh04/anat/sub-mgh04_flip-2_mt-off_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Benjamin Carrier", - "Date": "2021-07-14 11:34:18" + "Date": "2021-07-14 11:34:18", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-mgh04/anat/sub-mgh04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-mgh04/anat/sub-mgh04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-mgh04/anat/sub-mgh04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-mgh04/anat/sub-mgh04_space-other_T1w_label-SC_seg.json b/derivatives/labels/sub-mgh04/anat/sub-mgh04_space-other_T1w_label-SC_seg.json index 5064fff990..519bd99af9 100644 --- a/derivatives/labels/sub-mgh04/anat/sub-mgh04_space-other_T1w_label-SC_seg.json +++ b/derivatives/labels/sub-mgh04/anat/sub-mgh04_space-other_T1w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Benjamin Carrier", - "Date": "2021-07-13 16:00:45" + "Date": "2021-07-13 16:00:45", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-mgh04/anat/sub-mgh04_space-other_T2star_label-SC_seg.json b/derivatives/labels/sub-mgh04/anat/sub-mgh04_space-other_T2star_label-SC_seg.json index 1b5fd45c03..2ad2318716 100644 --- a/derivatives/labels/sub-mgh04/anat/sub-mgh04_space-other_T2star_label-SC_seg.json +++ b/derivatives/labels/sub-mgh04/anat/sub-mgh04_space-other_T2star_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:05" + "Date": "2021-06-08 15:06:05", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-mgh04/anat/sub-mgh04_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-mgh04/anat/sub-mgh04_space-other_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-mgh04/anat/sub-mgh04_space-other_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-mgh04/anat/sub-mgh04_space-other_T2w_label-SC_seg.json b/derivatives/labels/sub-mgh04/anat/sub-mgh04_space-other_T2w_label-SC_seg.json index c5fb06cc0b..d11650b5a8 100644 --- a/derivatives/labels/sub-mgh04/anat/sub-mgh04_space-other_T2w_label-SC_seg.json +++ b/derivatives/labels/sub-mgh04/anat/sub-mgh04_space-other_T2w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Benjamin Carrier", - "Date": "2021-07-14 10:52:01" + "Date": "2021-07-14 10:52:01", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-mgh04/dwi/sub-mgh04_rec-average_dwi_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-mgh04/dwi/sub-mgh04_rec-average_dwi_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-mgh04/dwi/sub-mgh04_rec-average_dwi_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-mgh05/anat/sub-mgh05_flip-1_mt-on_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-mgh05/anat/sub-mgh05_flip-1_mt-on_space-other_MTS_label-SC_seg.json index 1b5fd45c03..5741e5c920 100644 --- a/derivatives/labels/sub-mgh05/anat/sub-mgh05_flip-1_mt-on_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-mgh05/anat/sub-mgh05_flip-1_mt-on_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:05" + "Date": "2021-06-08 15:06:05", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-mgh05/anat/sub-mgh05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-mgh05/anat/sub-mgh05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-mgh05/anat/sub-mgh05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-mgh05/anat/sub-mgh05_flip-2_mt-off_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-mgh05/anat/sub-mgh05_flip-2_mt-off_space-other_MTS_label-SC_seg.json index 0e54104018..4d0f2cc388 100644 --- a/derivatives/labels/sub-mgh05/anat/sub-mgh05_flip-2_mt-off_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-mgh05/anat/sub-mgh05_flip-2_mt-off_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Benjamin Carrier", - "Date": "2021-07-14 13:41:55" + "Date": "2021-07-14 13:41:55", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-mgh05/anat/sub-mgh05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-mgh05/anat/sub-mgh05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-mgh05/anat/sub-mgh05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-mgh05/anat/sub-mgh05_space-other_T1w_label-SC_seg.json b/derivatives/labels/sub-mgh05/anat/sub-mgh05_space-other_T1w_label-SC_seg.json index 0c2d9dcde9..3b472e4e98 100644 --- a/derivatives/labels/sub-mgh05/anat/sub-mgh05_space-other_T1w_label-SC_seg.json +++ b/derivatives/labels/sub-mgh05/anat/sub-mgh05_space-other_T1w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Benjamin Carrier", - "Date": "2021-07-13 17:27:49" + "Date": "2021-07-13 17:27:49", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-mgh05/anat/sub-mgh05_space-other_T2star_label-SC_seg.json b/derivatives/labels/sub-mgh05/anat/sub-mgh05_space-other_T2star_label-SC_seg.json index 4f447e3d40..6e8efdcede 100644 --- a/derivatives/labels/sub-mgh05/anat/sub-mgh05_space-other_T2star_label-SC_seg.json +++ b/derivatives/labels/sub-mgh05/anat/sub-mgh05_space-other_T2star_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:06" + "Date": "2021-06-08 15:06:06", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-mgh05/anat/sub-mgh05_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-mgh05/anat/sub-mgh05_space-other_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-mgh05/anat/sub-mgh05_space-other_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-mgh05/anat/sub-mgh05_space-other_T2w_label-SC_seg.json b/derivatives/labels/sub-mgh05/anat/sub-mgh05_space-other_T2w_label-SC_seg.json index 05b8d9e05e..5b8ccf3e8c 100644 --- a/derivatives/labels/sub-mgh05/anat/sub-mgh05_space-other_T2w_label-SC_seg.json +++ b/derivatives/labels/sub-mgh05/anat/sub-mgh05_space-other_T2w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Benjamin Carrier", - "Date": "2021-07-14 12:22:19" + "Date": "2021-07-14 12:22:19", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-mgh05/dwi/sub-mgh05_rec-average_dwi_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-mgh05/dwi/sub-mgh05_rec-average_dwi_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-mgh05/dwi/sub-mgh05_rec-average_dwi_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-mgh06/anat/sub-mgh06_flip-1_mt-on_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-mgh06/anat/sub-mgh06_flip-1_mt-on_space-other_MTS_label-SC_seg.json index 37ed34e2ab..3baa90f35f 100644 --- a/derivatives/labels/sub-mgh06/anat/sub-mgh06_flip-1_mt-on_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-mgh06/anat/sub-mgh06_flip-1_mt-on_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Benjamin Carrier", - "Date": "2021-07-14 14:09:34" + "Date": "2021-07-14 14:09:34", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-mgh06/anat/sub-mgh06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-mgh06/anat/sub-mgh06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-mgh06/anat/sub-mgh06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-mgh06/anat/sub-mgh06_flip-2_mt-off_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-mgh06/anat/sub-mgh06_flip-2_mt-off_space-other_MTS_label-SC_seg.json index f9b50126c8..80af2d73b0 100644 --- a/derivatives/labels/sub-mgh06/anat/sub-mgh06_flip-2_mt-off_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-mgh06/anat/sub-mgh06_flip-2_mt-off_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Benjamin Carrier", - "Date": "2021-07-14 13:40:14" + "Date": "2021-07-14 13:40:14", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-mgh06/anat/sub-mgh06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-mgh06/anat/sub-mgh06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-mgh06/anat/sub-mgh06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-mgh06/anat/sub-mgh06_space-other_T1w_label-SC_seg.json b/derivatives/labels/sub-mgh06/anat/sub-mgh06_space-other_T1w_label-SC_seg.json index fade136b5c..16ae5b568d 100644 --- a/derivatives/labels/sub-mgh06/anat/sub-mgh06_space-other_T1w_label-SC_seg.json +++ b/derivatives/labels/sub-mgh06/anat/sub-mgh06_space-other_T1w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Benjamin Carrier", - "Date": "2021-07-13 17:53:34" + "Date": "2021-07-13 17:53:34", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-mgh06/anat/sub-mgh06_space-other_T2star_label-SC_seg.json b/derivatives/labels/sub-mgh06/anat/sub-mgh06_space-other_T2star_label-SC_seg.json index 4f447e3d40..6e8efdcede 100644 --- a/derivatives/labels/sub-mgh06/anat/sub-mgh06_space-other_T2star_label-SC_seg.json +++ b/derivatives/labels/sub-mgh06/anat/sub-mgh06_space-other_T2star_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:06" + "Date": "2021-06-08 15:06:06", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-mgh06/anat/sub-mgh06_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-mgh06/anat/sub-mgh06_space-other_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-mgh06/anat/sub-mgh06_space-other_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-mgh06/anat/sub-mgh06_space-other_T2w_label-SC_seg.json b/derivatives/labels/sub-mgh06/anat/sub-mgh06_space-other_T2w_label-SC_seg.json index 4f447e3d40..f054fd24dd 100644 --- a/derivatives/labels/sub-mgh06/anat/sub-mgh06_space-other_T2w_label-SC_seg.json +++ b/derivatives/labels/sub-mgh06/anat/sub-mgh06_space-other_T2w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:06" + "Date": "2021-06-08 15:06:06", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-mgh06/dwi/sub-mgh06_rec-average_dwi_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-mgh06/dwi/sub-mgh06_rec-average_dwi_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-mgh06/dwi/sub-mgh06_rec-average_dwi_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-milan01/anat/sub-milan01_flip-1_mt-on_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-milan01/anat/sub-milan01_flip-1_mt-on_space-other_MTS_label-SC_seg.json index 4f447e3d40..37f65008b2 100644 --- a/derivatives/labels/sub-milan01/anat/sub-milan01_flip-1_mt-on_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-milan01/anat/sub-milan01_flip-1_mt-on_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:06" + "Date": "2021-06-08 15:06:06", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-milan01/anat/sub-milan01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-milan01/anat/sub-milan01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-milan01/anat/sub-milan01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-milan01/anat/sub-milan01_flip-2_mt-off_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-milan01/anat/sub-milan01_flip-2_mt-off_space-other_MTS_label-SC_seg.json index 27850d34eb..e7073f3dfe 100644 --- a/derivatives/labels/sub-milan01/anat/sub-milan01_flip-2_mt-off_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-milan01/anat/sub-milan01_flip-2_mt-off_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Benjamin Carrier", - "Date": "2021-07-14 13:45:23" + "Date": "2021-07-14 13:45:23", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-milan01/anat/sub-milan01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-milan01/anat/sub-milan01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-milan01/anat/sub-milan01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-milan01/anat/sub-milan01_space-other_T1w_label-SC_seg.json b/derivatives/labels/sub-milan01/anat/sub-milan01_space-other_T1w_label-SC_seg.json index 780b9c0d26..689b675692 100644 --- a/derivatives/labels/sub-milan01/anat/sub-milan01_space-other_T1w_label-SC_seg.json +++ b/derivatives/labels/sub-milan01/anat/sub-milan01_space-other_T1w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-07-12 15:20:33" + "Date": "2021-07-12 15:20:33", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-milan01/anat/sub-milan01_space-other_T2star_label-SC_seg.json b/derivatives/labels/sub-milan01/anat/sub-milan01_space-other_T2star_label-SC_seg.json index 4f447e3d40..6e8efdcede 100644 --- a/derivatives/labels/sub-milan01/anat/sub-milan01_space-other_T2star_label-SC_seg.json +++ b/derivatives/labels/sub-milan01/anat/sub-milan01_space-other_T2star_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:06" + "Date": "2021-06-08 15:06:06", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-milan01/anat/sub-milan01_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-milan01/anat/sub-milan01_space-other_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-milan01/anat/sub-milan01_space-other_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-milan01/anat/sub-milan01_space-other_T2w_label-SC_seg.json b/derivatives/labels/sub-milan01/anat/sub-milan01_space-other_T2w_label-SC_seg.json index c7f10cbe09..84eada5faa 100644 --- a/derivatives/labels/sub-milan01/anat/sub-milan01_space-other_T2w_label-SC_seg.json +++ b/derivatives/labels/sub-milan01/anat/sub-milan01_space-other_T2w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Benjamin Carrier", - "Date": "2021-07-14 13:12:54" + "Date": "2021-07-14 13:12:54", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-milan01/dwi/sub-milan01_rec-average_dwi_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-milan01/dwi/sub-milan01_rec-average_dwi_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-milan01/dwi/sub-milan01_rec-average_dwi_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-milan02/anat/sub-milan02_flip-1_mt-on_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-milan02/anat/sub-milan02_flip-1_mt-on_space-other_MTS_label-SC_seg.json index 4f447e3d40..37f65008b2 100644 --- a/derivatives/labels/sub-milan02/anat/sub-milan02_flip-1_mt-on_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-milan02/anat/sub-milan02_flip-1_mt-on_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:06" + "Date": "2021-06-08 15:06:06", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-milan02/anat/sub-milan02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-milan02/anat/sub-milan02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-milan02/anat/sub-milan02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-milan02/anat/sub-milan02_flip-2_mt-off_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-milan02/anat/sub-milan02_flip-2_mt-off_space-other_MTS_label-SC_seg.json index 4f447e3d40..37f65008b2 100644 --- a/derivatives/labels/sub-milan02/anat/sub-milan02_flip-2_mt-off_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-milan02/anat/sub-milan02_flip-2_mt-off_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:06" + "Date": "2021-06-08 15:06:06", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-milan02/anat/sub-milan02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-milan02/anat/sub-milan02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-milan02/anat/sub-milan02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-milan02/anat/sub-milan02_space-other_T1w_label-SC_seg.json b/derivatives/labels/sub-milan02/anat/sub-milan02_space-other_T1w_label-SC_seg.json index 4f447e3d40..0a4535ffca 100644 --- a/derivatives/labels/sub-milan02/anat/sub-milan02_space-other_T1w_label-SC_seg.json +++ b/derivatives/labels/sub-milan02/anat/sub-milan02_space-other_T1w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:06" + "Date": "2021-06-08 15:06:06", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-milan02/anat/sub-milan02_space-other_T2star_label-SC_seg.json b/derivatives/labels/sub-milan02/anat/sub-milan02_space-other_T2star_label-SC_seg.json index 4f447e3d40..6e8efdcede 100644 --- a/derivatives/labels/sub-milan02/anat/sub-milan02_space-other_T2star_label-SC_seg.json +++ b/derivatives/labels/sub-milan02/anat/sub-milan02_space-other_T2star_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:06" + "Date": "2021-06-08 15:06:06", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-milan02/anat/sub-milan02_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-milan02/anat/sub-milan02_space-other_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-milan02/anat/sub-milan02_space-other_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-milan02/anat/sub-milan02_space-other_T2w_label-SC_seg.json b/derivatives/labels/sub-milan02/anat/sub-milan02_space-other_T2w_label-SC_seg.json index 4f447e3d40..f054fd24dd 100644 --- a/derivatives/labels/sub-milan02/anat/sub-milan02_space-other_T2w_label-SC_seg.json +++ b/derivatives/labels/sub-milan02/anat/sub-milan02_space-other_T2w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:06" + "Date": "2021-06-08 15:06:06", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-milan02/dwi/sub-milan02_rec-average_dwi_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-milan02/dwi/sub-milan02_rec-average_dwi_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-milan02/dwi/sub-milan02_rec-average_dwi_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-milan03/anat/sub-milan03_flip-1_mt-on_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-milan03/anat/sub-milan03_flip-1_mt-on_space-other_MTS_label-SC_seg.json index 4f447e3d40..37f65008b2 100644 --- a/derivatives/labels/sub-milan03/anat/sub-milan03_flip-1_mt-on_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-milan03/anat/sub-milan03_flip-1_mt-on_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:06" + "Date": "2021-06-08 15:06:06", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-milan03/anat/sub-milan03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-milan03/anat/sub-milan03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-milan03/anat/sub-milan03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-milan03/anat/sub-milan03_flip-2_mt-off_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-milan03/anat/sub-milan03_flip-2_mt-off_space-other_MTS_label-SC_seg.json index 5beb6b07f2..382103e533 100644 --- a/derivatives/labels/sub-milan03/anat/sub-milan03_flip-2_mt-off_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-milan03/anat/sub-milan03_flip-2_mt-off_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Benjamin Carrier", - "Date": "2021-07-14 13:46:59" + "Date": "2021-07-14 13:46:59", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-milan03/anat/sub-milan03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-milan03/anat/sub-milan03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-milan03/anat/sub-milan03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-milan03/anat/sub-milan03_space-other_T1w_label-SC_seg.json b/derivatives/labels/sub-milan03/anat/sub-milan03_space-other_T1w_label-SC_seg.json index 2b86ff145d..0a6cf85aec 100644 --- a/derivatives/labels/sub-milan03/anat/sub-milan03_space-other_T1w_label-SC_seg.json +++ b/derivatives/labels/sub-milan03/anat/sub-milan03_space-other_T1w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Benjamin Carrier", - "Date": "2021-07-13 17:58:53" + "Date": "2021-07-13 17:58:53", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-milan03/anat/sub-milan03_space-other_T2star_label-SC_seg.json b/derivatives/labels/sub-milan03/anat/sub-milan03_space-other_T2star_label-SC_seg.json index 4f447e3d40..6e8efdcede 100644 --- a/derivatives/labels/sub-milan03/anat/sub-milan03_space-other_T2star_label-SC_seg.json +++ b/derivatives/labels/sub-milan03/anat/sub-milan03_space-other_T2star_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:06" + "Date": "2021-06-08 15:06:06", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-milan03/anat/sub-milan03_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-milan03/anat/sub-milan03_space-other_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-milan03/anat/sub-milan03_space-other_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-milan03/anat/sub-milan03_space-other_T2w_label-SC_seg.json b/derivatives/labels/sub-milan03/anat/sub-milan03_space-other_T2w_label-SC_seg.json index 8391a94b0c..e37b009907 100644 --- a/derivatives/labels/sub-milan03/anat/sub-milan03_space-other_T2w_label-SC_seg.json +++ b/derivatives/labels/sub-milan03/anat/sub-milan03_space-other_T2w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Benjamin Carrier", - "Date": "2021-07-14 12:38:24" + "Date": "2021-07-14 12:38:24", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-milan03/dwi/sub-milan03_rec-average_dwi_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-milan03/dwi/sub-milan03_rec-average_dwi_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-milan03/dwi/sub-milan03_rec-average_dwi_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-milan04/anat/sub-milan04_flip-1_mt-on_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-milan04/anat/sub-milan04_flip-1_mt-on_space-other_MTS_label-SC_seg.json index 90865fa1dd..255fdf7ecc 100644 --- a/derivatives/labels/sub-milan04/anat/sub-milan04_flip-1_mt-on_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-milan04/anat/sub-milan04_flip-1_mt-on_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Benjamin Carrier", - "Date": "2021-07-14 14:17:36" + "Date": "2021-07-14 14:17:36", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-milan04/anat/sub-milan04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-milan04/anat/sub-milan04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-milan04/anat/sub-milan04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-milan04/anat/sub-milan04_flip-2_mt-off_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-milan04/anat/sub-milan04_flip-2_mt-off_space-other_MTS_label-SC_seg.json index 424b6b0c31..17d7953946 100644 --- a/derivatives/labels/sub-milan04/anat/sub-milan04_flip-2_mt-off_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-milan04/anat/sub-milan04_flip-2_mt-off_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Benjamin Carrier", - "Date": "2021-07-14 14:00:33" + "Date": "2021-07-14 14:00:33", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-milan04/anat/sub-milan04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-milan04/anat/sub-milan04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-milan04/anat/sub-milan04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-milan04/anat/sub-milan04_space-other_T1w_label-SC_seg.json b/derivatives/labels/sub-milan04/anat/sub-milan04_space-other_T1w_label-SC_seg.json index 35694f3987..9246acc33d 100644 --- a/derivatives/labels/sub-milan04/anat/sub-milan04_space-other_T1w_label-SC_seg.json +++ b/derivatives/labels/sub-milan04/anat/sub-milan04_space-other_T1w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Benjamin Carrier", - "Date": "2021-07-14 10:25:30" + "Date": "2021-07-14 10:25:30", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-milan04/anat/sub-milan04_space-other_T2star_label-SC_seg.json b/derivatives/labels/sub-milan04/anat/sub-milan04_space-other_T2star_label-SC_seg.json index 48143cc938..194636e47f 100644 --- a/derivatives/labels/sub-milan04/anat/sub-milan04_space-other_T2star_label-SC_seg.json +++ b/derivatives/labels/sub-milan04/anat/sub-milan04_space-other_T2star_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:07" + "Date": "2021-06-08 15:06:07", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-milan04/anat/sub-milan04_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-milan04/anat/sub-milan04_space-other_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-milan04/anat/sub-milan04_space-other_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-milan04/anat/sub-milan04_space-other_T2w_label-SC_seg.json b/derivatives/labels/sub-milan04/anat/sub-milan04_space-other_T2w_label-SC_seg.json index b23a3eb8dd..d203ad81d5 100644 --- a/derivatives/labels/sub-milan04/anat/sub-milan04_space-other_T2w_label-SC_seg.json +++ b/derivatives/labels/sub-milan04/anat/sub-milan04_space-other_T2w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Benjamin Carrier", - "Date": "2021-07-14 13:20:22" + "Date": "2021-07-14 13:20:22", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-milan04/dwi/sub-milan04_rec-average_dwi_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-milan04/dwi/sub-milan04_rec-average_dwi_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-milan04/dwi/sub-milan04_rec-average_dwi_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-milan05/anat/sub-milan05_flip-1_mt-on_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-milan05/anat/sub-milan05_flip-1_mt-on_space-other_MTS_label-SC_seg.json index 91b7543dfe..56fda0746d 100644 --- a/derivatives/labels/sub-milan05/anat/sub-milan05_flip-1_mt-on_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-milan05/anat/sub-milan05_flip-1_mt-on_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Benjamin Carrier", - "Date": "2021-07-14 14:11:00" + "Date": "2021-07-14 14:11:00", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-milan05/anat/sub-milan05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-milan05/anat/sub-milan05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-milan05/anat/sub-milan05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-milan05/anat/sub-milan05_flip-2_mt-off_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-milan05/anat/sub-milan05_flip-2_mt-off_space-other_MTS_label-SC_seg.json index 9d2feca3c9..7aa5e15867 100644 --- a/derivatives/labels/sub-milan05/anat/sub-milan05_flip-2_mt-off_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-milan05/anat/sub-milan05_flip-2_mt-off_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Benjamin Carrier", - "Date": "2021-07-14 13:38:03" + "Date": "2021-07-14 13:38:03", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-milan05/anat/sub-milan05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-milan05/anat/sub-milan05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-milan05/anat/sub-milan05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-milan05/anat/sub-milan05_space-other_T1w_label-SC_seg.json b/derivatives/labels/sub-milan05/anat/sub-milan05_space-other_T1w_label-SC_seg.json index 000aa11c62..8816549335 100644 --- a/derivatives/labels/sub-milan05/anat/sub-milan05_space-other_T1w_label-SC_seg.json +++ b/derivatives/labels/sub-milan05/anat/sub-milan05_space-other_T1w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Benjamin Carrier", - "Date": "2021-07-14 10:07:14" + "Date": "2021-07-14 10:07:14", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-milan05/anat/sub-milan05_space-other_T2star_label-SC_seg.json b/derivatives/labels/sub-milan05/anat/sub-milan05_space-other_T2star_label-SC_seg.json index 48143cc938..194636e47f 100644 --- a/derivatives/labels/sub-milan05/anat/sub-milan05_space-other_T2star_label-SC_seg.json +++ b/derivatives/labels/sub-milan05/anat/sub-milan05_space-other_T2star_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:07" + "Date": "2021-06-08 15:06:07", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-milan05/anat/sub-milan05_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-milan05/anat/sub-milan05_space-other_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-milan05/anat/sub-milan05_space-other_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-milan05/anat/sub-milan05_space-other_T2w_label-SC_seg.json b/derivatives/labels/sub-milan05/anat/sub-milan05_space-other_T2w_label-SC_seg.json index 2793a94dea..4ea086e9ca 100644 --- a/derivatives/labels/sub-milan05/anat/sub-milan05_space-other_T2w_label-SC_seg.json +++ b/derivatives/labels/sub-milan05/anat/sub-milan05_space-other_T2w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Benjamin Carrier", - "Date": "2021-07-14 11:40:37" + "Date": "2021-07-14 11:40:37", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-milan05/dwi/sub-milan05_rec-average_dwi_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-milan05/dwi/sub-milan05_rec-average_dwi_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-milan05/dwi/sub-milan05_rec-average_dwi_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-milan06/anat/sub-milan06_flip-1_mt-on_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-milan06/anat/sub-milan06_flip-1_mt-on_space-other_MTS_label-SC_seg.json index 6e89f088c3..9dc9fd33fb 100644 --- a/derivatives/labels/sub-milan06/anat/sub-milan06_flip-1_mt-on_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-milan06/anat/sub-milan06_flip-1_mt-on_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Benjamin Carrier", - "Date": "2021-07-14 14:21:26" + "Date": "2021-07-14 14:21:26", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-milan06/anat/sub-milan06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-milan06/anat/sub-milan06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-milan06/anat/sub-milan06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-milan06/anat/sub-milan06_flip-2_mt-off_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-milan06/anat/sub-milan06_flip-2_mt-off_space-other_MTS_label-SC_seg.json index 48143cc938..9113114484 100644 --- a/derivatives/labels/sub-milan06/anat/sub-milan06_flip-2_mt-off_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-milan06/anat/sub-milan06_flip-2_mt-off_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:07" + "Date": "2021-06-08 15:06:07", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-milan06/anat/sub-milan06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-milan06/anat/sub-milan06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-milan06/anat/sub-milan06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-milan06/anat/sub-milan06_space-other_T1w_label-SC_seg.json b/derivatives/labels/sub-milan06/anat/sub-milan06_space-other_T1w_label-SC_seg.json index dcb61a4ec9..a4536db7b6 100644 --- a/derivatives/labels/sub-milan06/anat/sub-milan06_space-other_T1w_label-SC_seg.json +++ b/derivatives/labels/sub-milan06/anat/sub-milan06_space-other_T1w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Benjamin Carrier", - "Date": "2021-07-14 11:04:02" + "Date": "2021-07-14 11:04:02", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-milan06/anat/sub-milan06_space-other_T2star_label-SC_seg.json b/derivatives/labels/sub-milan06/anat/sub-milan06_space-other_T2star_label-SC_seg.json index 48143cc938..194636e47f 100644 --- a/derivatives/labels/sub-milan06/anat/sub-milan06_space-other_T2star_label-SC_seg.json +++ b/derivatives/labels/sub-milan06/anat/sub-milan06_space-other_T2star_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:07" + "Date": "2021-06-08 15:06:07", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-milan06/anat/sub-milan06_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-milan06/anat/sub-milan06_space-other_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-milan06/anat/sub-milan06_space-other_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-milan06/anat/sub-milan06_space-other_T2w_label-SC_seg.json b/derivatives/labels/sub-milan06/anat/sub-milan06_space-other_T2w_label-SC_seg.json index 378b6d36ad..255ff77589 100644 --- a/derivatives/labels/sub-milan06/anat/sub-milan06_space-other_T2w_label-SC_seg.json +++ b/derivatives/labels/sub-milan06/anat/sub-milan06_space-other_T2w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Benjamin Carrier", - "Date": "2021-07-14 13:24:33" + "Date": "2021-07-14 13:24:33", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-milan06/dwi/sub-milan06_rec-average_dwi_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-milan06/dwi/sub-milan06_rec-average_dwi_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-milan06/dwi/sub-milan06_rec-average_dwi_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-milan07/anat/sub-milan07_flip-1_mt-on_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-milan07/anat/sub-milan07_flip-1_mt-on_space-other_MTS_label-SC_seg.json index 48143cc938..9113114484 100644 --- a/derivatives/labels/sub-milan07/anat/sub-milan07_flip-1_mt-on_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-milan07/anat/sub-milan07_flip-1_mt-on_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:07" + "Date": "2021-06-08 15:06:07", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-milan07/anat/sub-milan07_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-milan07/anat/sub-milan07_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-milan07/anat/sub-milan07_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-milan07/anat/sub-milan07_flip-2_mt-off_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-milan07/anat/sub-milan07_flip-2_mt-off_space-other_MTS_label-SC_seg.json index 48143cc938..9113114484 100644 --- a/derivatives/labels/sub-milan07/anat/sub-milan07_flip-2_mt-off_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-milan07/anat/sub-milan07_flip-2_mt-off_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:07" + "Date": "2021-06-08 15:06:07", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-milan07/anat/sub-milan07_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-milan07/anat/sub-milan07_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-milan07/anat/sub-milan07_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-milan07/anat/sub-milan07_space-other_T1w_label-SC_seg.json b/derivatives/labels/sub-milan07/anat/sub-milan07_space-other_T1w_label-SC_seg.json index 8c11e51623..e7209c0118 100644 --- a/derivatives/labels/sub-milan07/anat/sub-milan07_space-other_T1w_label-SC_seg.json +++ b/derivatives/labels/sub-milan07/anat/sub-milan07_space-other_T1w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Benjamin Carrier", - "Date": "2021-07-14 10:21:41" + "Date": "2021-07-14 10:21:41", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-milan07/anat/sub-milan07_space-other_T2star_label-SC_seg.json b/derivatives/labels/sub-milan07/anat/sub-milan07_space-other_T2star_label-SC_seg.json index 48143cc938..194636e47f 100644 --- a/derivatives/labels/sub-milan07/anat/sub-milan07_space-other_T2star_label-SC_seg.json +++ b/derivatives/labels/sub-milan07/anat/sub-milan07_space-other_T2star_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:07" + "Date": "2021-06-08 15:06:07", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-milan07/anat/sub-milan07_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-milan07/anat/sub-milan07_space-other_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-milan07/anat/sub-milan07_space-other_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-milan07/anat/sub-milan07_space-other_T2w_label-SC_seg.json b/derivatives/labels/sub-milan07/anat/sub-milan07_space-other_T2w_label-SC_seg.json index 48143cc938..b0d6958cf4 100644 --- a/derivatives/labels/sub-milan07/anat/sub-milan07_space-other_T2w_label-SC_seg.json +++ b/derivatives/labels/sub-milan07/anat/sub-milan07_space-other_T2w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:07" + "Date": "2021-06-08 15:06:07", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-milan07/dwi/sub-milan07_rec-average_dwi_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-milan07/dwi/sub-milan07_rec-average_dwi_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-milan07/dwi/sub-milan07_rec-average_dwi_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-mniPilot1/anat/sub-mniPilot1_flip-1_mt-on_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-mniPilot1/anat/sub-mniPilot1_flip-1_mt-on_space-other_MTS_label-SC_seg.json index 48143cc938..9113114484 100644 --- a/derivatives/labels/sub-mniPilot1/anat/sub-mniPilot1_flip-1_mt-on_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-mniPilot1/anat/sub-mniPilot1_flip-1_mt-on_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:07" + "Date": "2021-06-08 15:06:07", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-mniPilot1/anat/sub-mniPilot1_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-mniPilot1/anat/sub-mniPilot1_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-mniPilot1/anat/sub-mniPilot1_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-mniPilot1/anat/sub-mniPilot1_flip-2_mt-off_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-mniPilot1/anat/sub-mniPilot1_flip-2_mt-off_space-other_MTS_label-SC_seg.json index 544e395648..0a6fbb9247 100644 --- a/derivatives/labels/sub-mniPilot1/anat/sub-mniPilot1_flip-2_mt-off_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-mniPilot1/anat/sub-mniPilot1_flip-2_mt-off_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Benjamin Carrier", - "Date": "2021-07-14 14:08:22" + "Date": "2021-07-14 14:08:22", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-mniPilot1/anat/sub-mniPilot1_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-mniPilot1/anat/sub-mniPilot1_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-mniPilot1/anat/sub-mniPilot1_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-mniPilot1/anat/sub-mniPilot1_space-other_T1w_label-SC_seg.json b/derivatives/labels/sub-mniPilot1/anat/sub-mniPilot1_space-other_T1w_label-SC_seg.json index 701e3ef0ab..6f2478c51e 100644 --- a/derivatives/labels/sub-mniPilot1/anat/sub-mniPilot1_space-other_T1w_label-SC_seg.json +++ b/derivatives/labels/sub-mniPilot1/anat/sub-mniPilot1_space-other_T1w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-08-04 12:45:02" + "Date": "2021-08-04 12:45:02", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-mniPilot1/anat/sub-mniPilot1_space-other_T2star_label-SC_seg.json b/derivatives/labels/sub-mniPilot1/anat/sub-mniPilot1_space-other_T2star_label-SC_seg.json index 48143cc938..194636e47f 100644 --- a/derivatives/labels/sub-mniPilot1/anat/sub-mniPilot1_space-other_T2star_label-SC_seg.json +++ b/derivatives/labels/sub-mniPilot1/anat/sub-mniPilot1_space-other_T2star_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:07" + "Date": "2021-06-08 15:06:07", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-mniPilot1/anat/sub-mniPilot1_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-mniPilot1/anat/sub-mniPilot1_space-other_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-mniPilot1/anat/sub-mniPilot1_space-other_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-mniPilot1/anat/sub-mniPilot1_space-other_T2w_label-SC_seg.json b/derivatives/labels/sub-mniPilot1/anat/sub-mniPilot1_space-other_T2w_label-SC_seg.json index 48143cc938..b0d6958cf4 100644 --- a/derivatives/labels/sub-mniPilot1/anat/sub-mniPilot1_space-other_T2w_label-SC_seg.json +++ b/derivatives/labels/sub-mniPilot1/anat/sub-mniPilot1_space-other_T2w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:07" + "Date": "2021-06-08 15:06:07", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-mniPilot1/dwi/sub-mniPilot1_rec-average_dwi_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-mniPilot1/dwi/sub-mniPilot1_rec-average_dwi_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-mniPilot1/dwi/sub-mniPilot1_rec-average_dwi_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-mniS01/anat/sub-mniS01_flip-1_mt-on_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-mniS01/anat/sub-mniS01_flip-1_mt-on_space-other_MTS_label-SC_seg.json index a025f229d1..5ae84f92c5 100644 --- a/derivatives/labels/sub-mniS01/anat/sub-mniS01_flip-1_mt-on_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-mniS01/anat/sub-mniS01_flip-1_mt-on_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Benjamin Carrier", - "Date": "2021-07-14 14:12:29" + "Date": "2021-07-14 14:12:29", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-mniS01/anat/sub-mniS01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-mniS01/anat/sub-mniS01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-mniS01/anat/sub-mniS01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-mniS01/anat/sub-mniS01_flip-2_mt-off_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-mniS01/anat/sub-mniS01_flip-2_mt-off_space-other_MTS_label-SC_seg.json index d25d8d600a..23dd5b7181 100644 --- a/derivatives/labels/sub-mniS01/anat/sub-mniS01_flip-2_mt-off_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-mniS01/anat/sub-mniS01_flip-2_mt-off_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-05 17:15:56" + "Date": "2022-10-05 17:15:56", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-mniS01/anat/sub-mniS01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-mniS01/anat/sub-mniS01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-mniS01/anat/sub-mniS01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-mniS01/anat/sub-mniS01_space-other_T1w_label-SC_seg.json b/derivatives/labels/sub-mniS01/anat/sub-mniS01_space-other_T1w_label-SC_seg.json index 8d9fd28e36..34ec575abd 100644 --- a/derivatives/labels/sub-mniS01/anat/sub-mniS01_space-other_T1w_label-SC_seg.json +++ b/derivatives/labels/sub-mniS01/anat/sub-mniS01_space-other_T1w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Benjamin Carrier", - "Date": "2021-07-14 10:40:31" + "Date": "2021-07-14 10:40:31", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-mniS01/anat/sub-mniS01_space-other_T2star_label-SC_seg.json b/derivatives/labels/sub-mniS01/anat/sub-mniS01_space-other_T2star_label-SC_seg.json index 71ec77af4e..f050c7c9a0 100644 --- a/derivatives/labels/sub-mniS01/anat/sub-mniS01_space-other_T2star_label-SC_seg.json +++ b/derivatives/labels/sub-mniS01/anat/sub-mniS01_space-other_T2star_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:08" + "Date": "2021-06-08 15:06:08", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-mniS01/anat/sub-mniS01_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-mniS01/anat/sub-mniS01_space-other_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-mniS01/anat/sub-mniS01_space-other_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-mniS01/anat/sub-mniS01_space-other_T2w_label-SC_seg.json b/derivatives/labels/sub-mniS01/anat/sub-mniS01_space-other_T2w_label-SC_seg.json index 71ec77af4e..4e12aa56ce 100644 --- a/derivatives/labels/sub-mniS01/anat/sub-mniS01_space-other_T2w_label-SC_seg.json +++ b/derivatives/labels/sub-mniS01/anat/sub-mniS01_space-other_T2w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:08" + "Date": "2021-06-08 15:06:08", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-mniS01/dwi/sub-mniS01_rec-average_dwi_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-mniS01/dwi/sub-mniS01_rec-average_dwi_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-mniS01/dwi/sub-mniS01_rec-average_dwi_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-mniS02/anat/sub-mniS02_flip-1_mt-on_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-mniS02/anat/sub-mniS02_flip-1_mt-on_space-other_MTS_label-SC_seg.json index 71ec77af4e..8b8be599f4 100644 --- a/derivatives/labels/sub-mniS02/anat/sub-mniS02_flip-1_mt-on_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-mniS02/anat/sub-mniS02_flip-1_mt-on_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:08" + "Date": "2021-06-08 15:06:08", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-mniS02/anat/sub-mniS02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-mniS02/anat/sub-mniS02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-mniS02/anat/sub-mniS02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-mniS02/anat/sub-mniS02_flip-2_mt-off_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-mniS02/anat/sub-mniS02_flip-2_mt-off_space-other_MTS_label-SC_seg.json index 71ec77af4e..8b8be599f4 100644 --- a/derivatives/labels/sub-mniS02/anat/sub-mniS02_flip-2_mt-off_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-mniS02/anat/sub-mniS02_flip-2_mt-off_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:08" + "Date": "2021-06-08 15:06:08", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-mniS02/anat/sub-mniS02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-mniS02/anat/sub-mniS02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-mniS02/anat/sub-mniS02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-mniS02/anat/sub-mniS02_space-other_T1w_label-SC_seg.json b/derivatives/labels/sub-mniS02/anat/sub-mniS02_space-other_T1w_label-SC_seg.json index 71ec77af4e..438c63c737 100644 --- a/derivatives/labels/sub-mniS02/anat/sub-mniS02_space-other_T1w_label-SC_seg.json +++ b/derivatives/labels/sub-mniS02/anat/sub-mniS02_space-other_T1w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:08" + "Date": "2021-06-08 15:06:08", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-mniS02/anat/sub-mniS02_space-other_T2star_label-SC_seg.json b/derivatives/labels/sub-mniS02/anat/sub-mniS02_space-other_T2star_label-SC_seg.json index 71ec77af4e..f050c7c9a0 100644 --- a/derivatives/labels/sub-mniS02/anat/sub-mniS02_space-other_T2star_label-SC_seg.json +++ b/derivatives/labels/sub-mniS02/anat/sub-mniS02_space-other_T2star_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:08" + "Date": "2021-06-08 15:06:08", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-mniS02/anat/sub-mniS02_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-mniS02/anat/sub-mniS02_space-other_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-mniS02/anat/sub-mniS02_space-other_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-mniS02/anat/sub-mniS02_space-other_T2w_label-SC_seg.json b/derivatives/labels/sub-mniS02/anat/sub-mniS02_space-other_T2w_label-SC_seg.json index 71ec77af4e..4e12aa56ce 100644 --- a/derivatives/labels/sub-mniS02/anat/sub-mniS02_space-other_T2w_label-SC_seg.json +++ b/derivatives/labels/sub-mniS02/anat/sub-mniS02_space-other_T2w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:08" + "Date": "2021-06-08 15:06:08", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-mniS02/dwi/sub-mniS02_rec-average_dwi_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-mniS02/dwi/sub-mniS02_rec-average_dwi_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-mniS02/dwi/sub-mniS02_rec-average_dwi_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-mniS03/anat/sub-mniS03_flip-1_mt-on_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-mniS03/anat/sub-mniS03_flip-1_mt-on_space-other_MTS_label-SC_seg.json index 71ec77af4e..8b8be599f4 100644 --- a/derivatives/labels/sub-mniS03/anat/sub-mniS03_flip-1_mt-on_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-mniS03/anat/sub-mniS03_flip-1_mt-on_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:08" + "Date": "2021-06-08 15:06:08", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-mniS03/anat/sub-mniS03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-mniS03/anat/sub-mniS03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-mniS03/anat/sub-mniS03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-mniS03/anat/sub-mniS03_flip-2_mt-off_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-mniS03/anat/sub-mniS03_flip-2_mt-off_space-other_MTS_label-SC_seg.json index cfae42b683..d5c4bcae24 100644 --- a/derivatives/labels/sub-mniS03/anat/sub-mniS03_flip-2_mt-off_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-mniS03/anat/sub-mniS03_flip-2_mt-off_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-07-16 09:39:49" + "Date": "2021-07-16 09:39:49", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-mniS03/anat/sub-mniS03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-mniS03/anat/sub-mniS03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-mniS03/anat/sub-mniS03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-mniS03/anat/sub-mniS03_space-other_T1w_label-SC_seg.json b/derivatives/labels/sub-mniS03/anat/sub-mniS03_space-other_T1w_label-SC_seg.json index 1253661387..745bdafd81 100644 --- a/derivatives/labels/sub-mniS03/anat/sub-mniS03_space-other_T1w_label-SC_seg.json +++ b/derivatives/labels/sub-mniS03/anat/sub-mniS03_space-other_T1w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Benjamin Carrier", - "Date": "2021-07-14 10:33:07" + "Date": "2021-07-14 10:33:07", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-mniS03/anat/sub-mniS03_space-other_T2star_label-SC_seg.json b/derivatives/labels/sub-mniS03/anat/sub-mniS03_space-other_T2star_label-SC_seg.json index 71ec77af4e..f050c7c9a0 100644 --- a/derivatives/labels/sub-mniS03/anat/sub-mniS03_space-other_T2star_label-SC_seg.json +++ b/derivatives/labels/sub-mniS03/anat/sub-mniS03_space-other_T2star_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:08" + "Date": "2021-06-08 15:06:08", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-mniS03/anat/sub-mniS03_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-mniS03/anat/sub-mniS03_space-other_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-mniS03/anat/sub-mniS03_space-other_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-mniS03/anat/sub-mniS03_space-other_T2w_label-SC_seg.json b/derivatives/labels/sub-mniS03/anat/sub-mniS03_space-other_T2w_label-SC_seg.json index 71ec77af4e..4e12aa56ce 100644 --- a/derivatives/labels/sub-mniS03/anat/sub-mniS03_space-other_T2w_label-SC_seg.json +++ b/derivatives/labels/sub-mniS03/anat/sub-mniS03_space-other_T2w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:08" + "Date": "2021-06-08 15:06:08", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-mniS03/dwi/sub-mniS03_rec-average_dwi_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-mniS03/dwi/sub-mniS03_rec-average_dwi_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-mniS03/dwi/sub-mniS03_rec-average_dwi_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-mniS04/anat/sub-mniS04_flip-1_mt-on_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-mniS04/anat/sub-mniS04_flip-1_mt-on_space-other_MTS_label-SC_seg.json index 989d5baba9..1c874abd27 100644 --- a/derivatives/labels/sub-mniS04/anat/sub-mniS04_flip-1_mt-on_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-mniS04/anat/sub-mniS04_flip-1_mt-on_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Benjamin Carrier", - "Date": "2021-07-14 14:15:45" + "Date": "2021-07-14 14:15:45", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-mniS04/anat/sub-mniS04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-mniS04/anat/sub-mniS04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-mniS04/anat/sub-mniS04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-mniS04/anat/sub-mniS04_flip-2_mt-off_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-mniS04/anat/sub-mniS04_flip-2_mt-off_space-other_MTS_label-SC_seg.json index 71ec77af4e..8b8be599f4 100644 --- a/derivatives/labels/sub-mniS04/anat/sub-mniS04_flip-2_mt-off_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-mniS04/anat/sub-mniS04_flip-2_mt-off_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:08" + "Date": "2021-06-08 15:06:08", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-mniS04/anat/sub-mniS04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-mniS04/anat/sub-mniS04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-mniS04/anat/sub-mniS04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-mniS04/anat/sub-mniS04_space-other_T1w_label-SC_seg.json b/derivatives/labels/sub-mniS04/anat/sub-mniS04_space-other_T1w_label-SC_seg.json index 8eaceccbfd..642f4458f4 100644 --- a/derivatives/labels/sub-mniS04/anat/sub-mniS04_space-other_T1w_label-SC_seg.json +++ b/derivatives/labels/sub-mniS04/anat/sub-mniS04_space-other_T1w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Benjamin Carrier", - "Date": "2021-07-14 10:13:47" + "Date": "2021-07-14 10:13:47", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-mniS04/anat/sub-mniS04_space-other_T2star_label-SC_seg.json b/derivatives/labels/sub-mniS04/anat/sub-mniS04_space-other_T2star_label-SC_seg.json index 71ec77af4e..f050c7c9a0 100644 --- a/derivatives/labels/sub-mniS04/anat/sub-mniS04_space-other_T2star_label-SC_seg.json +++ b/derivatives/labels/sub-mniS04/anat/sub-mniS04_space-other_T2star_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:08" + "Date": "2021-06-08 15:06:08", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-mniS04/anat/sub-mniS04_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-mniS04/anat/sub-mniS04_space-other_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-mniS04/anat/sub-mniS04_space-other_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-mniS04/anat/sub-mniS04_space-other_T2w_label-SC_seg.json b/derivatives/labels/sub-mniS04/anat/sub-mniS04_space-other_T2w_label-SC_seg.json index f78b5ac98a..f0bc7c4531 100644 --- a/derivatives/labels/sub-mniS04/anat/sub-mniS04_space-other_T2w_label-SC_seg.json +++ b/derivatives/labels/sub-mniS04/anat/sub-mniS04_space-other_T2w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Benjamin Carrier", - "Date": "2021-07-14 12:29:15" + "Date": "2021-07-14 12:29:15", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-mniS04/dwi/sub-mniS04_rec-average_dwi_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-mniS04/dwi/sub-mniS04_rec-average_dwi_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-mniS04/dwi/sub-mniS04_rec-average_dwi_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-mniS05/anat/sub-mniS05_flip-1_mt-on_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-mniS05/anat/sub-mniS05_flip-1_mt-on_space-other_MTS_label-SC_seg.json index 8eb534f053..00b512e92d 100644 --- a/derivatives/labels/sub-mniS05/anat/sub-mniS05_flip-1_mt-on_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-mniS05/anat/sub-mniS05_flip-1_mt-on_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "olivier morinlupien", - "Date": "2021-06-21 12:51:33" + "Date": "2021-06-21 12:51:33", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-mniS05/anat/sub-mniS05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-mniS05/anat/sub-mniS05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-mniS05/anat/sub-mniS05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-mniS05/anat/sub-mniS05_flip-2_mt-off_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-mniS05/anat/sub-mniS05_flip-2_mt-off_space-other_MTS_label-SC_seg.json index e677098e79..fadb200c77 100644 --- a/derivatives/labels/sub-mniS05/anat/sub-mniS05_flip-2_mt-off_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-mniS05/anat/sub-mniS05_flip-2_mt-off_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Benjamin Carrier", - "Date": "2021-07-14 14:23:58" + "Date": "2021-07-14 14:23:58", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-mniS05/anat/sub-mniS05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-mniS05/anat/sub-mniS05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-mniS05/anat/sub-mniS05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-mniS05/anat/sub-mniS05_space-other_T1w_label-SC_seg.json b/derivatives/labels/sub-mniS05/anat/sub-mniS05_space-other_T1w_label-SC_seg.json index 8448624684..0eda2ea53e 100644 --- a/derivatives/labels/sub-mniS05/anat/sub-mniS05_space-other_T1w_label-SC_seg.json +++ b/derivatives/labels/sub-mniS05/anat/sub-mniS05_space-other_T1w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Benjamin Carrier", - "Date": "2021-07-14 11:17:30" + "Date": "2021-07-14 11:17:30", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-mniS05/anat/sub-mniS05_space-other_T2star_gmlabel-SC_seg.json b/derivatives/labels/sub-mniS05/anat/sub-mniS05_space-other_T2star_gmlabel-SC_seg.json index 552b87d198..9b23e58c0e 100644 --- a/derivatives/labels/sub-mniS05/anat/sub-mniS05_space-other_T2star_gmlabel-SC_seg.json +++ b/derivatives/labels/sub-mniS05/anat/sub-mniS05_space-other_T2star_gmlabel-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-03 10:35:15" + "Date": "2021-06-03 10:35:15", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-mniS05/anat/sub-mniS05_space-other_T2star_label-SC_seg.json b/derivatives/labels/sub-mniS05/anat/sub-mniS05_space-other_T2star_label-SC_seg.json index 775aee2f44..ee6c1a9570 100644 --- a/derivatives/labels/sub-mniS05/anat/sub-mniS05_space-other_T2star_label-SC_seg.json +++ b/derivatives/labels/sub-mniS05/anat/sub-mniS05_space-other_T2star_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "olivier morinlupien", - "Date": "2021-06-21 12:53:55" + "Date": "2021-06-21 12:53:55", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-mniS05/anat/sub-mniS05_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-mniS05/anat/sub-mniS05_space-other_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-mniS05/anat/sub-mniS05_space-other_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-mniS05/anat/sub-mniS05_space-other_T2w_label-SC_seg.json b/derivatives/labels/sub-mniS05/anat/sub-mniS05_space-other_T2w_label-SC_seg.json index 552b87d198..58ccf3a545 100644 --- a/derivatives/labels/sub-mniS05/anat/sub-mniS05_space-other_T2w_label-SC_seg.json +++ b/derivatives/labels/sub-mniS05/anat/sub-mniS05_space-other_T2w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-03 10:35:15" + "Date": "2021-06-03 10:35:15", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-mniS05/dwi/sub-mniS05_rec-average_dwi_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-mniS05/dwi/sub-mniS05_rec-average_dwi_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-mniS05/dwi/sub-mniS05_rec-average_dwi_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-mniS06/anat/sub-mniS06_flip-1_mt-on_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-mniS06/anat/sub-mniS06_flip-1_mt-on_space-other_MTS_label-SC_seg.json index fcba2de9e3..4289261ddb 100644 --- a/derivatives/labels/sub-mniS06/anat/sub-mniS06_flip-1_mt-on_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-mniS06/anat/sub-mniS06_flip-1_mt-on_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:09" + "Date": "2021-06-08 15:06:09", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-mniS06/anat/sub-mniS06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-mniS06/anat/sub-mniS06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-mniS06/anat/sub-mniS06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-mniS06/anat/sub-mniS06_flip-2_mt-off_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-mniS06/anat/sub-mniS06_flip-2_mt-off_space-other_MTS_label-SC_seg.json index a190b12a1a..a670972af3 100644 --- a/derivatives/labels/sub-mniS06/anat/sub-mniS06_flip-2_mt-off_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-mniS06/anat/sub-mniS06_flip-2_mt-off_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Benjamin Carrier", - "Date": "2021-07-14 14:05:45" + "Date": "2021-07-14 14:05:45", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-mniS06/anat/sub-mniS06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-mniS06/anat/sub-mniS06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-mniS06/anat/sub-mniS06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-mniS06/anat/sub-mniS06_space-other_T1w_label-SC_seg.json b/derivatives/labels/sub-mniS06/anat/sub-mniS06_space-other_T1w_label-SC_seg.json index f2fff99851..56d29e82b0 100644 --- a/derivatives/labels/sub-mniS06/anat/sub-mniS06_space-other_T1w_label-SC_seg.json +++ b/derivatives/labels/sub-mniS06/anat/sub-mniS06_space-other_T1w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Benjamin Carrier", - "Date": "2021-07-14 10:59:56" + "Date": "2021-07-14 10:59:56", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-mniS06/anat/sub-mniS06_space-other_T2star_label-SC_seg.json b/derivatives/labels/sub-mniS06/anat/sub-mniS06_space-other_T2star_label-SC_seg.json index fcba2de9e3..391e7d6176 100644 --- a/derivatives/labels/sub-mniS06/anat/sub-mniS06_space-other_T2star_label-SC_seg.json +++ b/derivatives/labels/sub-mniS06/anat/sub-mniS06_space-other_T2star_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:09" + "Date": "2021-06-08 15:06:09", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-mniS06/anat/sub-mniS06_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-mniS06/anat/sub-mniS06_space-other_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-mniS06/anat/sub-mniS06_space-other_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-mniS06/anat/sub-mniS06_space-other_T2w_label-SC_seg.json b/derivatives/labels/sub-mniS06/anat/sub-mniS06_space-other_T2w_label-SC_seg.json index fcba2de9e3..108e4e51a0 100644 --- a/derivatives/labels/sub-mniS06/anat/sub-mniS06_space-other_T2w_label-SC_seg.json +++ b/derivatives/labels/sub-mniS06/anat/sub-mniS06_space-other_T2w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:09" + "Date": "2021-06-08 15:06:09", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-mniS06/dwi/sub-mniS06_rec-average_dwi_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-mniS06/dwi/sub-mniS06_rec-average_dwi_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-mniS06/dwi/sub-mniS06_rec-average_dwi_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-mniS07/anat/sub-mniS07_flip-1_mt-on_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-mniS07/anat/sub-mniS07_flip-1_mt-on_space-other_MTS_label-SC_seg.json index fcba2de9e3..4289261ddb 100644 --- a/derivatives/labels/sub-mniS07/anat/sub-mniS07_flip-1_mt-on_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-mniS07/anat/sub-mniS07_flip-1_mt-on_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:09" + "Date": "2021-06-08 15:06:09", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-mniS07/anat/sub-mniS07_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-mniS07/anat/sub-mniS07_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-mniS07/anat/sub-mniS07_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-mniS07/anat/sub-mniS07_flip-2_mt-off_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-mniS07/anat/sub-mniS07_flip-2_mt-off_space-other_MTS_label-SC_seg.json index 196f7466da..a3208c493c 100644 --- a/derivatives/labels/sub-mniS07/anat/sub-mniS07_flip-2_mt-off_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-mniS07/anat/sub-mniS07_flip-2_mt-off_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Benjamin Carrier", - "Date": "2021-07-14 14:13:48" + "Date": "2021-07-14 14:13:48", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-mniS07/anat/sub-mniS07_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-mniS07/anat/sub-mniS07_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-mniS07/anat/sub-mniS07_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-mniS07/anat/sub-mniS07_space-other_T1w_label-SC_seg.json b/derivatives/labels/sub-mniS07/anat/sub-mniS07_space-other_T1w_label-SC_seg.json index ac1cc19203..556aeca436 100644 --- a/derivatives/labels/sub-mniS07/anat/sub-mniS07_space-other_T1w_label-SC_seg.json +++ b/derivatives/labels/sub-mniS07/anat/sub-mniS07_space-other_T1w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Benjamin Carrier", - "Date": "2021-07-14 11:09:55" + "Date": "2021-07-14 11:09:55", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-mniS07/anat/sub-mniS07_space-other_T2star_label-SC_seg.json b/derivatives/labels/sub-mniS07/anat/sub-mniS07_space-other_T2star_label-SC_seg.json index fcba2de9e3..391e7d6176 100644 --- a/derivatives/labels/sub-mniS07/anat/sub-mniS07_space-other_T2star_label-SC_seg.json +++ b/derivatives/labels/sub-mniS07/anat/sub-mniS07_space-other_T2star_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:09" + "Date": "2021-06-08 15:06:09", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-mniS07/anat/sub-mniS07_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-mniS07/anat/sub-mniS07_space-other_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-mniS07/anat/sub-mniS07_space-other_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-mniS07/anat/sub-mniS07_space-other_T2w_label-SC_seg.json b/derivatives/labels/sub-mniS07/anat/sub-mniS07_space-other_T2w_label-SC_seg.json index 703a22a3f2..9dd2bbd8ed 100644 --- a/derivatives/labels/sub-mniS07/anat/sub-mniS07_space-other_T2w_label-SC_seg.json +++ b/derivatives/labels/sub-mniS07/anat/sub-mniS07_space-other_T2w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Benjamin Carrier", - "Date": "2021-07-14 13:52:26" + "Date": "2021-07-14 13:52:26", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-mniS07/dwi/sub-mniS07_rec-average_dwi_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-mniS07/dwi/sub-mniS07_rec-average_dwi_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-mniS07/dwi/sub-mniS07_rec-average_dwi_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-mniS08/anat/sub-mniS08_flip-1_mt-on_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-mniS08/anat/sub-mniS08_flip-1_mt-on_space-other_MTS_label-SC_seg.json index b4b90a3190..ea40663e79 100644 --- a/derivatives/labels/sub-mniS08/anat/sub-mniS08_flip-1_mt-on_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-mniS08/anat/sub-mniS08_flip-1_mt-on_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "olivier morinlupien", - "Date": "2021-06-21 12:45:03" + "Date": "2021-06-21 12:45:03", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-mniS08/anat/sub-mniS08_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-mniS08/anat/sub-mniS08_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-mniS08/anat/sub-mniS08_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-mniS08/anat/sub-mniS08_flip-2_mt-off_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-mniS08/anat/sub-mniS08_flip-2_mt-off_space-other_MTS_label-SC_seg.json index 4265a7a684..c83c4733bf 100644 --- a/derivatives/labels/sub-mniS08/anat/sub-mniS08_flip-2_mt-off_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-mniS08/anat/sub-mniS08_flip-2_mt-off_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-05 17:19:55" + "Date": "2022-10-05 17:19:55", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-mniS08/anat/sub-mniS08_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-mniS08/anat/sub-mniS08_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-mniS08/anat/sub-mniS08_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-mniS08/anat/sub-mniS08_space-other_T1w_label-SC_seg.json b/derivatives/labels/sub-mniS08/anat/sub-mniS08_space-other_T1w_label-SC_seg.json index 13f40cdf3c..8a455773e4 100644 --- a/derivatives/labels/sub-mniS08/anat/sub-mniS08_space-other_T1w_label-SC_seg.json +++ b/derivatives/labels/sub-mniS08/anat/sub-mniS08_space-other_T1w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Benjamin Carrier", - "Date": "2021-07-14 11:23:00" + "Date": "2021-07-14 11:23:00", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-mniS08/anat/sub-mniS08_space-other_T2star_label-SC_seg.json b/derivatives/labels/sub-mniS08/anat/sub-mniS08_space-other_T2star_label-SC_seg.json index fcba2de9e3..391e7d6176 100644 --- a/derivatives/labels/sub-mniS08/anat/sub-mniS08_space-other_T2star_label-SC_seg.json +++ b/derivatives/labels/sub-mniS08/anat/sub-mniS08_space-other_T2star_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:09" + "Date": "2021-06-08 15:06:09", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-mniS08/anat/sub-mniS08_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-mniS08/anat/sub-mniS08_space-other_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-mniS08/anat/sub-mniS08_space-other_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-mniS08/anat/sub-mniS08_space-other_T2w_label-SC_seg.json b/derivatives/labels/sub-mniS08/anat/sub-mniS08_space-other_T2w_label-SC_seg.json index fcba2de9e3..108e4e51a0 100644 --- a/derivatives/labels/sub-mniS08/anat/sub-mniS08_space-other_T2w_label-SC_seg.json +++ b/derivatives/labels/sub-mniS08/anat/sub-mniS08_space-other_T2w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:09" + "Date": "2021-06-08 15:06:09", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-mniS08/dwi/sub-mniS08_rec-average_dwi_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-mniS08/dwi/sub-mniS08_rec-average_dwi_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-mniS08/dwi/sub-mniS08_rec-average_dwi_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-mniS09/anat/sub-mniS09_flip-1_mt-on_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-mniS09/anat/sub-mniS09_flip-1_mt-on_space-other_MTS_label-SC_seg.json index fcba2de9e3..4289261ddb 100644 --- a/derivatives/labels/sub-mniS09/anat/sub-mniS09_flip-1_mt-on_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-mniS09/anat/sub-mniS09_flip-1_mt-on_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:09" + "Date": "2021-06-08 15:06:09", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-mniS09/anat/sub-mniS09_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-mniS09/anat/sub-mniS09_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-mniS09/anat/sub-mniS09_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-mniS09/anat/sub-mniS09_flip-2_mt-off_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-mniS09/anat/sub-mniS09_flip-2_mt-off_space-other_MTS_label-SC_seg.json index 957ea06a9c..08d9b345f5 100644 --- a/derivatives/labels/sub-mniS09/anat/sub-mniS09_flip-2_mt-off_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-mniS09/anat/sub-mniS09_flip-2_mt-off_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Benjamin Carrier", - "Date": "2021-07-14 14:19:30" + "Date": "2021-07-14 14:19:30", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-mniS09/anat/sub-mniS09_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-mniS09/anat/sub-mniS09_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-mniS09/anat/sub-mniS09_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-mniS09/anat/sub-mniS09_space-other_T1w_label-SC_seg.json b/derivatives/labels/sub-mniS09/anat/sub-mniS09_space-other_T1w_label-SC_seg.json index 5c786f0f9a..67f284a82c 100644 --- a/derivatives/labels/sub-mniS09/anat/sub-mniS09_space-other_T1w_label-SC_seg.json +++ b/derivatives/labels/sub-mniS09/anat/sub-mniS09_space-other_T1w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Benjamin Carrier", - "Date": "2021-07-14 11:28:24" + "Date": "2021-07-14 11:28:24", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-mniS09/anat/sub-mniS09_space-other_T2star_label-SC_seg.json b/derivatives/labels/sub-mniS09/anat/sub-mniS09_space-other_T2star_label-SC_seg.json index fcba2de9e3..391e7d6176 100644 --- a/derivatives/labels/sub-mniS09/anat/sub-mniS09_space-other_T2star_label-SC_seg.json +++ b/derivatives/labels/sub-mniS09/anat/sub-mniS09_space-other_T2star_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:09" + "Date": "2021-06-08 15:06:09", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-mniS09/anat/sub-mniS09_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-mniS09/anat/sub-mniS09_space-other_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-mniS09/anat/sub-mniS09_space-other_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-mniS09/anat/sub-mniS09_space-other_T2w_label-SC_seg.json b/derivatives/labels/sub-mniS09/anat/sub-mniS09_space-other_T2w_label-SC_seg.json index 610dac09bf..d2925b89fd 100644 --- a/derivatives/labels/sub-mniS09/anat/sub-mniS09_space-other_T2w_label-SC_seg.json +++ b/derivatives/labels/sub-mniS09/anat/sub-mniS09_space-other_T2w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Benjamin Carrier", - "Date": "2021-07-14 14:02:07" + "Date": "2021-07-14 14:02:07", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-mniS09/dwi/sub-mniS09_rec-average_dwi_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-mniS09/dwi/sub-mniS09_rec-average_dwi_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-mniS09/dwi/sub-mniS09_rec-average_dwi_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-mountSinai01/anat/sub-mountSinai01_flip-1_mt-on_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-mountSinai01/anat/sub-mountSinai01_flip-1_mt-on_space-other_MTS_label-SC_seg.json index fcba2de9e3..4289261ddb 100644 --- a/derivatives/labels/sub-mountSinai01/anat/sub-mountSinai01_flip-1_mt-on_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-mountSinai01/anat/sub-mountSinai01_flip-1_mt-on_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:09" + "Date": "2021-06-08 15:06:09", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-mountSinai01/anat/sub-mountSinai01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-mountSinai01/anat/sub-mountSinai01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-mountSinai01/anat/sub-mountSinai01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-mountSinai01/anat/sub-mountSinai01_flip-2_mt-off_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-mountSinai01/anat/sub-mountSinai01_flip-2_mt-off_space-other_MTS_label-SC_seg.json index 88c9c970c8..eef5dbf380 100644 --- a/derivatives/labels/sub-mountSinai01/anat/sub-mountSinai01_flip-2_mt-off_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-mountSinai01/anat/sub-mountSinai01_flip-2_mt-off_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Benjamin Carrier", - "Date": "2021-07-14 13:43:35" + "Date": "2021-07-14 13:43:35", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-mountSinai01/anat/sub-mountSinai01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-mountSinai01/anat/sub-mountSinai01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-mountSinai01/anat/sub-mountSinai01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-mountSinai01/anat/sub-mountSinai01_space-other_T1w_label-SC_seg.json b/derivatives/labels/sub-mountSinai01/anat/sub-mountSinai01_space-other_T1w_label-SC_seg.json index 2db9cb4a28..a76a8bdc46 100644 --- a/derivatives/labels/sub-mountSinai01/anat/sub-mountSinai01_space-other_T1w_label-SC_seg.json +++ b/derivatives/labels/sub-mountSinai01/anat/sub-mountSinai01_space-other_T1w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Benjamin Carrier", - "Date": "2021-07-14 10:47:39" + "Date": "2021-07-14 10:47:39", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-mountSinai01/anat/sub-mountSinai01_space-other_T2star_label-SC_seg.json b/derivatives/labels/sub-mountSinai01/anat/sub-mountSinai01_space-other_T2star_label-SC_seg.json index 74ee126a5c..6fc99f0793 100644 --- a/derivatives/labels/sub-mountSinai01/anat/sub-mountSinai01_space-other_T2star_label-SC_seg.json +++ b/derivatives/labels/sub-mountSinai01/anat/sub-mountSinai01_space-other_T2star_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:10" + "Date": "2021-06-08 15:06:10", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-mountSinai01/anat/sub-mountSinai01_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-mountSinai01/anat/sub-mountSinai01_space-other_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-mountSinai01/anat/sub-mountSinai01_space-other_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-mountSinai01/anat/sub-mountSinai01_space-other_T2w_label-SC_seg.json b/derivatives/labels/sub-mountSinai01/anat/sub-mountSinai01_space-other_T2w_label-SC_seg.json index 4964d454de..8a531f7c02 100644 --- a/derivatives/labels/sub-mountSinai01/anat/sub-mountSinai01_space-other_T2w_label-SC_seg.json +++ b/derivatives/labels/sub-mountSinai01/anat/sub-mountSinai01_space-other_T2w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Benjamin Carrier", - "Date": "2021-07-14 11:46:46" + "Date": "2021-07-14 11:46:46", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-mountSinai01/dwi/sub-mountSinai01_rec-average_dwi_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-mountSinai01/dwi/sub-mountSinai01_rec-average_dwi_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-mountSinai01/dwi/sub-mountSinai01_rec-average_dwi_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-mountSinai02/anat/sub-mountSinai02_flip-1_mt-on_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-mountSinai02/anat/sub-mountSinai02_flip-1_mt-on_space-other_MTS_label-SC_seg.json index 74ee126a5c..4668b1db03 100644 --- a/derivatives/labels/sub-mountSinai02/anat/sub-mountSinai02_flip-1_mt-on_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-mountSinai02/anat/sub-mountSinai02_flip-1_mt-on_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:10" + "Date": "2021-06-08 15:06:10", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-mountSinai02/anat/sub-mountSinai02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-mountSinai02/anat/sub-mountSinai02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-mountSinai02/anat/sub-mountSinai02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-mountSinai02/anat/sub-mountSinai02_flip-2_mt-off_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-mountSinai02/anat/sub-mountSinai02_flip-2_mt-off_space-other_MTS_label-SC_seg.json index 6f6d4edf30..632556b271 100644 --- a/derivatives/labels/sub-mountSinai02/anat/sub-mountSinai02_flip-2_mt-off_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-mountSinai02/anat/sub-mountSinai02_flip-2_mt-off_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Benjamin Carrier", - "Date": "2021-07-14 14:26:33" + "Date": "2021-07-14 14:26:33", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-mountSinai02/anat/sub-mountSinai02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-mountSinai02/anat/sub-mountSinai02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-mountSinai02/anat/sub-mountSinai02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-mountSinai02/anat/sub-mountSinai02_space-other_T1w_label-SC_seg.json b/derivatives/labels/sub-mountSinai02/anat/sub-mountSinai02_space-other_T1w_label-SC_seg.json index 93ad82e0af..ddaf45a715 100644 --- a/derivatives/labels/sub-mountSinai02/anat/sub-mountSinai02_space-other_T1w_label-SC_seg.json +++ b/derivatives/labels/sub-mountSinai02/anat/sub-mountSinai02_space-other_T1w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Benjamin Carrier", - "Date": "2021-07-14 11:36:29" + "Date": "2021-07-14 11:36:29", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-mountSinai02/anat/sub-mountSinai02_space-other_T2star_label-SC_seg.json b/derivatives/labels/sub-mountSinai02/anat/sub-mountSinai02_space-other_T2star_label-SC_seg.json index 74ee126a5c..6fc99f0793 100644 --- a/derivatives/labels/sub-mountSinai02/anat/sub-mountSinai02_space-other_T2star_label-SC_seg.json +++ b/derivatives/labels/sub-mountSinai02/anat/sub-mountSinai02_space-other_T2star_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:10" + "Date": "2021-06-08 15:06:10", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-mountSinai02/anat/sub-mountSinai02_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-mountSinai02/anat/sub-mountSinai02_space-other_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-mountSinai02/anat/sub-mountSinai02_space-other_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-mountSinai02/anat/sub-mountSinai02_space-other_T2w_label-SC_seg.json b/derivatives/labels/sub-mountSinai02/anat/sub-mountSinai02_space-other_T2w_label-SC_seg.json index 74ee126a5c..41fa3d7ed5 100644 --- a/derivatives/labels/sub-mountSinai02/anat/sub-mountSinai02_space-other_T2w_label-SC_seg.json +++ b/derivatives/labels/sub-mountSinai02/anat/sub-mountSinai02_space-other_T2w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:10" + "Date": "2021-06-08 15:06:10", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-mountSinai02/dwi/sub-mountSinai02_rec-average_dwi_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-mountSinai02/dwi/sub-mountSinai02_rec-average_dwi_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-mountSinai02/dwi/sub-mountSinai02_rec-average_dwi_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-mountSinai03/anat/sub-mountSinai03_flip-1_mt-on_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-mountSinai03/anat/sub-mountSinai03_flip-1_mt-on_space-other_MTS_label-SC_seg.json index 74ee126a5c..4668b1db03 100644 --- a/derivatives/labels/sub-mountSinai03/anat/sub-mountSinai03_flip-1_mt-on_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-mountSinai03/anat/sub-mountSinai03_flip-1_mt-on_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:10" + "Date": "2021-06-08 15:06:10", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-mountSinai03/anat/sub-mountSinai03_flip-2_mt-off_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-mountSinai03/anat/sub-mountSinai03_flip-2_mt-off_space-other_MTS_label-SC_seg.json index 74ee126a5c..4668b1db03 100644 --- a/derivatives/labels/sub-mountSinai03/anat/sub-mountSinai03_flip-2_mt-off_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-mountSinai03/anat/sub-mountSinai03_flip-2_mt-off_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:10" + "Date": "2021-06-08 15:06:10", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-mountSinai03/anat/sub-mountSinai03_space-other_T1w_label-SC_seg.json b/derivatives/labels/sub-mountSinai03/anat/sub-mountSinai03_space-other_T1w_label-SC_seg.json index 44decf92bc..329cab4b79 100644 --- a/derivatives/labels/sub-mountSinai03/anat/sub-mountSinai03_space-other_T1w_label-SC_seg.json +++ b/derivatives/labels/sub-mountSinai03/anat/sub-mountSinai03_space-other_T1w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "olivier morin-lupien", - "Date": "2021-06-21 16:39:14" + "Date": "2021-06-21 16:39:14", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-mountSinai03/anat/sub-mountSinai03_space-other_T2star_label-SC_seg.json b/derivatives/labels/sub-mountSinai03/anat/sub-mountSinai03_space-other_T2star_label-SC_seg.json index 74ee126a5c..6fc99f0793 100644 --- a/derivatives/labels/sub-mountSinai03/anat/sub-mountSinai03_space-other_T2star_label-SC_seg.json +++ b/derivatives/labels/sub-mountSinai03/anat/sub-mountSinai03_space-other_T2star_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:10" + "Date": "2021-06-08 15:06:10", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-mountSinai03/anat/sub-mountSinai03_space-other_T2w_label-SC_seg.json b/derivatives/labels/sub-mountSinai03/anat/sub-mountSinai03_space-other_T2w_label-SC_seg.json index 90c00663dd..3c78264f9d 100644 --- a/derivatives/labels/sub-mountSinai03/anat/sub-mountSinai03_space-other_T2w_label-SC_seg.json +++ b/derivatives/labels/sub-mountSinai03/anat/sub-mountSinai03_space-other_T2w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "olivier morin-lupien", - "Date": "2021-06-21 16:49:43" + "Date": "2021-06-21 16:49:43", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-mountSinai04/anat/sub-mountSinai04_flip-1_mt-on_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-mountSinai04/anat/sub-mountSinai04_flip-1_mt-on_space-other_MTS_label-SC_seg.json index b54d1d6b14..1259841af0 100644 --- a/derivatives/labels/sub-mountSinai04/anat/sub-mountSinai04_flip-1_mt-on_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-mountSinai04/anat/sub-mountSinai04_flip-1_mt-on_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-08-04 11:16:39" + "Date": "2021-08-04 11:16:39", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-mountSinai04/anat/sub-mountSinai04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-mountSinai04/anat/sub-mountSinai04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-mountSinai04/anat/sub-mountSinai04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-mountSinai04/anat/sub-mountSinai04_flip-2_mt-off_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-mountSinai04/anat/sub-mountSinai04_flip-2_mt-off_space-other_MTS_label-SC_seg.json index 8bf43974fe..0dde6f069d 100644 --- a/derivatives/labels/sub-mountSinai04/anat/sub-mountSinai04_flip-2_mt-off_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-mountSinai04/anat/sub-mountSinai04_flip-2_mt-off_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "olivier Morinlupien", - "Date": "2021-06-23 15:58:20" + "Date": "2021-06-23 15:58:20", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-mountSinai04/anat/sub-mountSinai04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-mountSinai04/anat/sub-mountSinai04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-mountSinai04/anat/sub-mountSinai04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-mountSinai04/anat/sub-mountSinai04_space-other_T1w_label-SC_seg.json b/derivatives/labels/sub-mountSinai04/anat/sub-mountSinai04_space-other_T1w_label-SC_seg.json index aaec6b1d78..28358ffc05 100644 --- a/derivatives/labels/sub-mountSinai04/anat/sub-mountSinai04_space-other_T1w_label-SC_seg.json +++ b/derivatives/labels/sub-mountSinai04/anat/sub-mountSinai04_space-other_T1w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "olivier morin-lupien", - "Date": "2021-06-21 16:40:07" + "Date": "2021-06-21 16:40:07", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-mountSinai04/anat/sub-mountSinai04_space-other_T2star_label-SC_seg.json b/derivatives/labels/sub-mountSinai04/anat/sub-mountSinai04_space-other_T2star_label-SC_seg.json index 74ee126a5c..6fc99f0793 100644 --- a/derivatives/labels/sub-mountSinai04/anat/sub-mountSinai04_space-other_T2star_label-SC_seg.json +++ b/derivatives/labels/sub-mountSinai04/anat/sub-mountSinai04_space-other_T2star_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:10" + "Date": "2021-06-08 15:06:10", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-mountSinai04/anat/sub-mountSinai04_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-mountSinai04/anat/sub-mountSinai04_space-other_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-mountSinai04/anat/sub-mountSinai04_space-other_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-mountSinai04/anat/sub-mountSinai04_space-other_T2w_label-SC_seg.json b/derivatives/labels/sub-mountSinai04/anat/sub-mountSinai04_space-other_T2w_label-SC_seg.json index 12f1803518..1ac8914244 100644 --- a/derivatives/labels/sub-mountSinai04/anat/sub-mountSinai04_space-other_T2w_label-SC_seg.json +++ b/derivatives/labels/sub-mountSinai04/anat/sub-mountSinai04_space-other_T2w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "olivier Morinlupien", - "Date": "2021-06-23 15:55:50" + "Date": "2021-06-23 15:55:50", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-mountSinai04/dwi/sub-mountSinai04_rec-average_dwi_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-mountSinai04/dwi/sub-mountSinai04_rec-average_dwi_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-mountSinai04/dwi/sub-mountSinai04_rec-average_dwi_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-mountSinai05/anat/sub-mountSinai05_flip-1_mt-on_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-mountSinai05/anat/sub-mountSinai05_flip-1_mt-on_space-other_MTS_label-SC_seg.json index 44fc575db4..0f7b741571 100644 --- a/derivatives/labels/sub-mountSinai05/anat/sub-mountSinai05_flip-1_mt-on_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-mountSinai05/anat/sub-mountSinai05_flip-1_mt-on_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "olivier Morinlupien", - "Date": "2021-06-23 16:01:44" + "Date": "2021-06-23 16:01:44", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-mountSinai05/anat/sub-mountSinai05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-mountSinai05/anat/sub-mountSinai05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-mountSinai05/anat/sub-mountSinai05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-mountSinai05/anat/sub-mountSinai05_flip-2_mt-off_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-mountSinai05/anat/sub-mountSinai05_flip-2_mt-off_space-other_MTS_label-SC_seg.json index 76e02726ba..a5b80b4020 100644 --- a/derivatives/labels/sub-mountSinai05/anat/sub-mountSinai05_flip-2_mt-off_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-mountSinai05/anat/sub-mountSinai05_flip-2_mt-off_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "olivier Morinlupien", - "Date": "2021-06-23 15:59:04" + "Date": "2021-06-23 15:59:04", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-mountSinai05/anat/sub-mountSinai05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-mountSinai05/anat/sub-mountSinai05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-mountSinai05/anat/sub-mountSinai05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-mountSinai05/anat/sub-mountSinai05_space-other_T1w_label-SC_seg.json b/derivatives/labels/sub-mountSinai05/anat/sub-mountSinai05_space-other_T1w_label-SC_seg.json index 4567480caa..ea2967cf3c 100644 --- a/derivatives/labels/sub-mountSinai05/anat/sub-mountSinai05_space-other_T1w_label-SC_seg.json +++ b/derivatives/labels/sub-mountSinai05/anat/sub-mountSinai05_space-other_T1w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "olivier morin-lupien", - "Date": "2021-06-21 16:41:00" + "Date": "2021-06-21 16:41:00", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-mountSinai05/anat/sub-mountSinai05_space-other_T2star_label-SC_seg.json b/derivatives/labels/sub-mountSinai05/anat/sub-mountSinai05_space-other_T2star_label-SC_seg.json index 74ee126a5c..6fc99f0793 100644 --- a/derivatives/labels/sub-mountSinai05/anat/sub-mountSinai05_space-other_T2star_label-SC_seg.json +++ b/derivatives/labels/sub-mountSinai05/anat/sub-mountSinai05_space-other_T2star_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:10" + "Date": "2021-06-08 15:06:10", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-mountSinai05/anat/sub-mountSinai05_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-mountSinai05/anat/sub-mountSinai05_space-other_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-mountSinai05/anat/sub-mountSinai05_space-other_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-mountSinai05/anat/sub-mountSinai05_space-other_T2w_label-SC_seg.json b/derivatives/labels/sub-mountSinai05/anat/sub-mountSinai05_space-other_T2w_label-SC_seg.json index 74ee126a5c..41fa3d7ed5 100644 --- a/derivatives/labels/sub-mountSinai05/anat/sub-mountSinai05_space-other_T2w_label-SC_seg.json +++ b/derivatives/labels/sub-mountSinai05/anat/sub-mountSinai05_space-other_T2w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:10" + "Date": "2021-06-08 15:06:10", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-mountSinai05/dwi/sub-mountSinai05_rec-average_dwi_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-mountSinai05/dwi/sub-mountSinai05_rec-average_dwi_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-mountSinai05/dwi/sub-mountSinai05_rec-average_dwi_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-mountSinai06/anat/sub-mountSinai06_flip-1_mt-on_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-mountSinai06/anat/sub-mountSinai06_flip-1_mt-on_space-other_MTS_label-SC_seg.json index 6381e289af..1714eac53c 100644 --- a/derivatives/labels/sub-mountSinai06/anat/sub-mountSinai06_flip-1_mt-on_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-mountSinai06/anat/sub-mountSinai06_flip-1_mt-on_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "olivier Morinlupien", - "Date": "2021-06-23 16:02:45" + "Date": "2021-06-23 16:02:45", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-mountSinai06/anat/sub-mountSinai06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-mountSinai06/anat/sub-mountSinai06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-mountSinai06/anat/sub-mountSinai06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-mountSinai06/anat/sub-mountSinai06_flip-2_mt-off_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-mountSinai06/anat/sub-mountSinai06_flip-2_mt-off_space-other_MTS_label-SC_seg.json index 74ee126a5c..4668b1db03 100644 --- a/derivatives/labels/sub-mountSinai06/anat/sub-mountSinai06_flip-2_mt-off_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-mountSinai06/anat/sub-mountSinai06_flip-2_mt-off_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:10" + "Date": "2021-06-08 15:06:10", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-mountSinai06/anat/sub-mountSinai06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-mountSinai06/anat/sub-mountSinai06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-mountSinai06/anat/sub-mountSinai06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-mountSinai06/anat/sub-mountSinai06_space-other_T1w_label-SC_seg.json b/derivatives/labels/sub-mountSinai06/anat/sub-mountSinai06_space-other_T1w_label-SC_seg.json index cceb11baab..2defc4503d 100644 --- a/derivatives/labels/sub-mountSinai06/anat/sub-mountSinai06_space-other_T1w_label-SC_seg.json +++ b/derivatives/labels/sub-mountSinai06/anat/sub-mountSinai06_space-other_T1w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "olivier morin-lupien", - "Date": "2021-06-21 16:44:19" + "Date": "2021-06-21 16:44:19", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-mountSinai06/anat/sub-mountSinai06_space-other_T2star_label-SC_seg.json b/derivatives/labels/sub-mountSinai06/anat/sub-mountSinai06_space-other_T2star_label-SC_seg.json index 74ee126a5c..6fc99f0793 100644 --- a/derivatives/labels/sub-mountSinai06/anat/sub-mountSinai06_space-other_T2star_label-SC_seg.json +++ b/derivatives/labels/sub-mountSinai06/anat/sub-mountSinai06_space-other_T2star_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:10" + "Date": "2021-06-08 15:06:10", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-mountSinai06/anat/sub-mountSinai06_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-mountSinai06/anat/sub-mountSinai06_space-other_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-mountSinai06/anat/sub-mountSinai06_space-other_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-mountSinai06/anat/sub-mountSinai06_space-other_T2w_label-SC_seg.json b/derivatives/labels/sub-mountSinai06/anat/sub-mountSinai06_space-other_T2w_label-SC_seg.json index c043ceb998..2d43a61f91 100644 --- a/derivatives/labels/sub-mountSinai06/anat/sub-mountSinai06_space-other_T2w_label-SC_seg.json +++ b/derivatives/labels/sub-mountSinai06/anat/sub-mountSinai06_space-other_T2w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "olivier Morinlupien", - "Date": "2021-06-23 15:56:57" + "Date": "2021-06-23 15:56:57", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-mountSinai06/dwi/sub-mountSinai06_rec-average_dwi_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-mountSinai06/dwi/sub-mountSinai06_rec-average_dwi_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-mountSinai06/dwi/sub-mountSinai06_rec-average_dwi_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-mpicbs01/anat/sub-mpicbs01_flip-1_mt-on_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-mpicbs01/anat/sub-mpicbs01_flip-1_mt-on_space-other_MTS_label-SC_seg.json index 74ee126a5c..4668b1db03 100644 --- a/derivatives/labels/sub-mpicbs01/anat/sub-mpicbs01_flip-1_mt-on_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-mpicbs01/anat/sub-mpicbs01_flip-1_mt-on_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:10" + "Date": "2021-06-08 15:06:10", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-mpicbs01/anat/sub-mpicbs01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-mpicbs01/anat/sub-mpicbs01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-mpicbs01/anat/sub-mpicbs01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-mpicbs01/anat/sub-mpicbs01_flip-2_mt-off_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-mpicbs01/anat/sub-mpicbs01_flip-2_mt-off_space-other_MTS_label-SC_seg.json index 116f00a3e8..58152f5ac5 100644 --- a/derivatives/labels/sub-mpicbs01/anat/sub-mpicbs01_flip-2_mt-off_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-mpicbs01/anat/sub-mpicbs01_flip-2_mt-off_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "olivier Morinlupien", - "Date": "2021-06-23 16:04:36" + "Date": "2021-06-23 16:04:36", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-mpicbs01/anat/sub-mpicbs01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-mpicbs01/anat/sub-mpicbs01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-mpicbs01/anat/sub-mpicbs01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-mpicbs01/anat/sub-mpicbs01_space-other_T1w_label-SC_seg.json b/derivatives/labels/sub-mpicbs01/anat/sub-mpicbs01_space-other_T1w_label-SC_seg.json index e87999951f..c365ba19cd 100644 --- a/derivatives/labels/sub-mpicbs01/anat/sub-mpicbs01_space-other_T1w_label-SC_seg.json +++ b/derivatives/labels/sub-mpicbs01/anat/sub-mpicbs01_space-other_T1w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "olivier morin-lupien", - "Date": "2021-06-21 16:48:21" + "Date": "2021-06-21 16:48:21", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-mpicbs01/anat/sub-mpicbs01_space-other_T2star_label-SC_seg.json b/derivatives/labels/sub-mpicbs01/anat/sub-mpicbs01_space-other_T2star_label-SC_seg.json index 74ee126a5c..6fc99f0793 100644 --- a/derivatives/labels/sub-mpicbs01/anat/sub-mpicbs01_space-other_T2star_label-SC_seg.json +++ b/derivatives/labels/sub-mpicbs01/anat/sub-mpicbs01_space-other_T2star_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:10" + "Date": "2021-06-08 15:06:10", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-mpicbs01/anat/sub-mpicbs01_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-mpicbs01/anat/sub-mpicbs01_space-other_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-mpicbs01/anat/sub-mpicbs01_space-other_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-mpicbs01/anat/sub-mpicbs01_space-other_T2w_label-SC_seg.json b/derivatives/labels/sub-mpicbs01/anat/sub-mpicbs01_space-other_T2w_label-SC_seg.json index 74ee126a5c..41fa3d7ed5 100644 --- a/derivatives/labels/sub-mpicbs01/anat/sub-mpicbs01_space-other_T2w_label-SC_seg.json +++ b/derivatives/labels/sub-mpicbs01/anat/sub-mpicbs01_space-other_T2w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:10" + "Date": "2021-06-08 15:06:10", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-mpicbs01/dwi/sub-mpicbs01_rec-average_dwi_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-mpicbs01/dwi/sub-mpicbs01_rec-average_dwi_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-mpicbs01/dwi/sub-mpicbs01_rec-average_dwi_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-mpicbs02/anat/sub-mpicbs02_flip-1_mt-on_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-mpicbs02/anat/sub-mpicbs02_flip-1_mt-on_space-other_MTS_label-SC_seg.json index 318f5e874c..fb85bad314 100644 --- a/derivatives/labels/sub-mpicbs02/anat/sub-mpicbs02_flip-1_mt-on_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-mpicbs02/anat/sub-mpicbs02_flip-1_mt-on_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "olivier Morinlupien", - "Date": "2021-06-23 16:08:01" + "Date": "2021-06-23 16:08:01", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-mpicbs02/anat/sub-mpicbs02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-mpicbs02/anat/sub-mpicbs02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-mpicbs02/anat/sub-mpicbs02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-mpicbs02/anat/sub-mpicbs02_flip-2_mt-off_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-mpicbs02/anat/sub-mpicbs02_flip-2_mt-off_space-other_MTS_label-SC_seg.json index bff5827123..337d4e5e1a 100644 --- a/derivatives/labels/sub-mpicbs02/anat/sub-mpicbs02_flip-2_mt-off_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-mpicbs02/anat/sub-mpicbs02_flip-2_mt-off_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "olivier Morinlupien", - "Date": "2021-06-23 16:05:20" + "Date": "2021-06-23 16:05:20", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-mpicbs02/anat/sub-mpicbs02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-mpicbs02/anat/sub-mpicbs02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-mpicbs02/anat/sub-mpicbs02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-mpicbs02/anat/sub-mpicbs02_space-other_T1w_label-SC_seg.json b/derivatives/labels/sub-mpicbs02/anat/sub-mpicbs02_space-other_T1w_label-SC_seg.json index 5ec4ec9974..b492ef9a39 100644 --- a/derivatives/labels/sub-mpicbs02/anat/sub-mpicbs02_space-other_T1w_label-SC_seg.json +++ b/derivatives/labels/sub-mpicbs02/anat/sub-mpicbs02_space-other_T1w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-08-04 12:47:57" + "Date": "2021-08-04 12:47:57", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-mpicbs02/anat/sub-mpicbs02_space-other_T2star_label-SC_seg.json b/derivatives/labels/sub-mpicbs02/anat/sub-mpicbs02_space-other_T2star_label-SC_seg.json index 9d452f22ce..8ac5899372 100644 --- a/derivatives/labels/sub-mpicbs02/anat/sub-mpicbs02_space-other_T2star_label-SC_seg.json +++ b/derivatives/labels/sub-mpicbs02/anat/sub-mpicbs02_space-other_T2star_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:11" + "Date": "2021-06-08 15:06:11", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-mpicbs02/anat/sub-mpicbs02_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-mpicbs02/anat/sub-mpicbs02_space-other_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-mpicbs02/anat/sub-mpicbs02_space-other_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-mpicbs02/anat/sub-mpicbs02_space-other_T2w_label-SC_seg.json b/derivatives/labels/sub-mpicbs02/anat/sub-mpicbs02_space-other_T2w_label-SC_seg.json index 8e36e6de69..a76a4b3b5e 100644 --- a/derivatives/labels/sub-mpicbs02/anat/sub-mpicbs02_space-other_T2w_label-SC_seg.json +++ b/derivatives/labels/sub-mpicbs02/anat/sub-mpicbs02_space-other_T2w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "olivier Morinlupien", - "Date": "2021-06-23 16:00:57" + "Date": "2021-06-23 16:00:57", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-mpicbs02/dwi/sub-mpicbs02_rec-average_dwi_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-mpicbs02/dwi/sub-mpicbs02_rec-average_dwi_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-mpicbs02/dwi/sub-mpicbs02_rec-average_dwi_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-mpicbs03/anat/sub-mpicbs03_flip-1_mt-on_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-mpicbs03/anat/sub-mpicbs03_flip-1_mt-on_space-other_MTS_label-SC_seg.json index 9d452f22ce..d480be5ed9 100644 --- a/derivatives/labels/sub-mpicbs03/anat/sub-mpicbs03_flip-1_mt-on_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-mpicbs03/anat/sub-mpicbs03_flip-1_mt-on_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:11" + "Date": "2021-06-08 15:06:11", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-mpicbs03/anat/sub-mpicbs03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-mpicbs03/anat/sub-mpicbs03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-mpicbs03/anat/sub-mpicbs03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-mpicbs03/anat/sub-mpicbs03_flip-2_mt-off_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-mpicbs03/anat/sub-mpicbs03_flip-2_mt-off_space-other_MTS_label-SC_seg.json index 7c35570f25..326c3ee4c8 100644 --- a/derivatives/labels/sub-mpicbs03/anat/sub-mpicbs03_flip-2_mt-off_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-mpicbs03/anat/sub-mpicbs03_flip-2_mt-off_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "olivier Morinlupien", - "Date": "2021-06-23 16:09:29" + "Date": "2021-06-23 16:09:29", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-mpicbs03/anat/sub-mpicbs03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-mpicbs03/anat/sub-mpicbs03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-mpicbs03/anat/sub-mpicbs03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-mpicbs03/anat/sub-mpicbs03_space-other_T1w_label-SC_seg.json b/derivatives/labels/sub-mpicbs03/anat/sub-mpicbs03_space-other_T1w_label-SC_seg.json index de515cf7b7..bc906da4ba 100644 --- a/derivatives/labels/sub-mpicbs03/anat/sub-mpicbs03_space-other_T1w_label-SC_seg.json +++ b/derivatives/labels/sub-mpicbs03/anat/sub-mpicbs03_space-other_T1w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "olivier morin-lupien", - "Date": "2021-06-21 16:51:51" + "Date": "2021-06-21 16:51:51", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-mpicbs03/anat/sub-mpicbs03_space-other_T2star_label-SC_seg.json b/derivatives/labels/sub-mpicbs03/anat/sub-mpicbs03_space-other_T2star_label-SC_seg.json index 9d452f22ce..8ac5899372 100644 --- a/derivatives/labels/sub-mpicbs03/anat/sub-mpicbs03_space-other_T2star_label-SC_seg.json +++ b/derivatives/labels/sub-mpicbs03/anat/sub-mpicbs03_space-other_T2star_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:11" + "Date": "2021-06-08 15:06:11", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-mpicbs03/anat/sub-mpicbs03_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-mpicbs03/anat/sub-mpicbs03_space-other_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-mpicbs03/anat/sub-mpicbs03_space-other_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-mpicbs03/anat/sub-mpicbs03_space-other_T2w_label-SC_seg.json b/derivatives/labels/sub-mpicbs03/anat/sub-mpicbs03_space-other_T2w_label-SC_seg.json index b8429d771a..f647365fb2 100644 --- a/derivatives/labels/sub-mpicbs03/anat/sub-mpicbs03_space-other_T2w_label-SC_seg.json +++ b/derivatives/labels/sub-mpicbs03/anat/sub-mpicbs03_space-other_T2w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "olivier Morinlupien", - "Date": "2021-06-23 16:07:17" + "Date": "2021-06-23 16:07:17", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-mpicbs03/dwi/sub-mpicbs03_rec-average_dwi_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-mpicbs03/dwi/sub-mpicbs03_rec-average_dwi_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-mpicbs03/dwi/sub-mpicbs03_rec-average_dwi_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-mpicbs05/anat/sub-mpicbs05_flip-1_mt-on_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-mpicbs05/anat/sub-mpicbs05_flip-1_mt-on_space-other_MTS_label-SC_seg.json index 9d452f22ce..d480be5ed9 100644 --- a/derivatives/labels/sub-mpicbs05/anat/sub-mpicbs05_flip-1_mt-on_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-mpicbs05/anat/sub-mpicbs05_flip-1_mt-on_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:11" + "Date": "2021-06-08 15:06:11", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-mpicbs05/anat/sub-mpicbs05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-mpicbs05/anat/sub-mpicbs05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-mpicbs05/anat/sub-mpicbs05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-mpicbs05/anat/sub-mpicbs05_flip-2_mt-off_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-mpicbs05/anat/sub-mpicbs05_flip-2_mt-off_space-other_MTS_label-SC_seg.json index a122f36e87..9a94cf82ac 100644 --- a/derivatives/labels/sub-mpicbs05/anat/sub-mpicbs05_flip-2_mt-off_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-mpicbs05/anat/sub-mpicbs05_flip-2_mt-off_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "olivier Morinlupien", - "Date": "2021-06-23 16:08:45" + "Date": "2021-06-23 16:08:45", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-mpicbs05/anat/sub-mpicbs05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-mpicbs05/anat/sub-mpicbs05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-mpicbs05/anat/sub-mpicbs05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-mpicbs05/anat/sub-mpicbs05_space-other_T1w_label-SC_seg.json b/derivatives/labels/sub-mpicbs05/anat/sub-mpicbs05_space-other_T1w_label-SC_seg.json index 5e0af2c534..9db0f04a6e 100644 --- a/derivatives/labels/sub-mpicbs05/anat/sub-mpicbs05_space-other_T1w_label-SC_seg.json +++ b/derivatives/labels/sub-mpicbs05/anat/sub-mpicbs05_space-other_T1w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "olivier morin-lupien", - "Date": "2021-06-21 16:53:41" + "Date": "2021-06-21 16:53:41", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-mpicbs05/anat/sub-mpicbs05_space-other_T2star_label-SC_seg.json b/derivatives/labels/sub-mpicbs05/anat/sub-mpicbs05_space-other_T2star_label-SC_seg.json index 9d452f22ce..8ac5899372 100644 --- a/derivatives/labels/sub-mpicbs05/anat/sub-mpicbs05_space-other_T2star_label-SC_seg.json +++ b/derivatives/labels/sub-mpicbs05/anat/sub-mpicbs05_space-other_T2star_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:11" + "Date": "2021-06-08 15:06:11", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-mpicbs05/anat/sub-mpicbs05_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-mpicbs05/anat/sub-mpicbs05_space-other_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-mpicbs05/anat/sub-mpicbs05_space-other_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-mpicbs05/anat/sub-mpicbs05_space-other_T2w_label-SC_seg.json b/derivatives/labels/sub-mpicbs05/anat/sub-mpicbs05_space-other_T2w_label-SC_seg.json index 1ea94fdeda..6d5efeb0aa 100644 --- a/derivatives/labels/sub-mpicbs05/anat/sub-mpicbs05_space-other_T2w_label-SC_seg.json +++ b/derivatives/labels/sub-mpicbs05/anat/sub-mpicbs05_space-other_T2w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "olivier Morinlupien", - "Date": "2021-06-23 16:06:21" + "Date": "2021-06-23 16:06:21", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-mpicbs05/dwi/sub-mpicbs05_rec-average_dwi_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-mpicbs05/dwi/sub-mpicbs05_rec-average_dwi_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-mpicbs05/dwi/sub-mpicbs05_rec-average_dwi_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-mpicbs06/anat/sub-mpicbs06_flip-1_mt-on_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-mpicbs06/anat/sub-mpicbs06_flip-1_mt-on_space-other_MTS_label-SC_seg.json index 9d452f22ce..d480be5ed9 100644 --- a/derivatives/labels/sub-mpicbs06/anat/sub-mpicbs06_flip-1_mt-on_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-mpicbs06/anat/sub-mpicbs06_flip-1_mt-on_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:11" + "Date": "2021-06-08 15:06:11", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-mpicbs06/anat/sub-mpicbs06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-mpicbs06/anat/sub-mpicbs06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-mpicbs06/anat/sub-mpicbs06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-mpicbs06/anat/sub-mpicbs06_flip-2_mt-off_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-mpicbs06/anat/sub-mpicbs06_flip-2_mt-off_space-other_MTS_label-SC_seg.json index d9800f866d..7c26b37000 100644 --- a/derivatives/labels/sub-mpicbs06/anat/sub-mpicbs06_flip-2_mt-off_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-mpicbs06/anat/sub-mpicbs06_flip-2_mt-off_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "olivier Morinlupien", - "Date": "2021-06-23 16:10:15" + "Date": "2021-06-23 16:10:15", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-mpicbs06/anat/sub-mpicbs06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-mpicbs06/anat/sub-mpicbs06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-mpicbs06/anat/sub-mpicbs06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-mpicbs06/anat/sub-mpicbs06_space-other_T1w_label-SC_seg.json b/derivatives/labels/sub-mpicbs06/anat/sub-mpicbs06_space-other_T1w_label-SC_seg.json index d0d61ca79d..14914ce777 100644 --- a/derivatives/labels/sub-mpicbs06/anat/sub-mpicbs06_space-other_T1w_label-SC_seg.json +++ b/derivatives/labels/sub-mpicbs06/anat/sub-mpicbs06_space-other_T1w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "olivier morin-lupien", - "Date": "2021-06-21 16:54:26" + "Date": "2021-06-21 16:54:26", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-mpicbs06/anat/sub-mpicbs06_space-other_T2star_label-SC_seg.json b/derivatives/labels/sub-mpicbs06/anat/sub-mpicbs06_space-other_T2star_label-SC_seg.json index b2bb13a43d..5818b1259c 100644 --- a/derivatives/labels/sub-mpicbs06/anat/sub-mpicbs06_space-other_T2star_label-SC_seg.json +++ b/derivatives/labels/sub-mpicbs06/anat/sub-mpicbs06_space-other_T2star_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-07-08 10:14:08" + "Date": "2021-07-08 10:14:08", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-mpicbs06/anat/sub-mpicbs06_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-mpicbs06/anat/sub-mpicbs06_space-other_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-mpicbs06/anat/sub-mpicbs06_space-other_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-mpicbs06/anat/sub-mpicbs06_space-other_T2w_label-SC_seg.json b/derivatives/labels/sub-mpicbs06/anat/sub-mpicbs06_space-other_T2w_label-SC_seg.json index 9d452f22ce..b71b6b5acc 100644 --- a/derivatives/labels/sub-mpicbs06/anat/sub-mpicbs06_space-other_T2w_label-SC_seg.json +++ b/derivatives/labels/sub-mpicbs06/anat/sub-mpicbs06_space-other_T2w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:11" + "Date": "2021-06-08 15:06:11", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-mpicbs06/dwi/sub-mpicbs06_rec-average_dwi_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-mpicbs06/dwi/sub-mpicbs06_rec-average_dwi_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-mpicbs06/dwi/sub-mpicbs06_rec-average_dwi_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-mpicbs07/anat/sub-mpicbs07_flip-1_mt-on_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-mpicbs07/anat/sub-mpicbs07_flip-1_mt-on_space-other_MTS_label-SC_seg.json index 9d452f22ce..d480be5ed9 100644 --- a/derivatives/labels/sub-mpicbs07/anat/sub-mpicbs07_flip-1_mt-on_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-mpicbs07/anat/sub-mpicbs07_flip-1_mt-on_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:11" + "Date": "2021-06-08 15:06:11", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-mpicbs07/anat/sub-mpicbs07_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-mpicbs07/anat/sub-mpicbs07_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-mpicbs07/anat/sub-mpicbs07_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-mpicbs07/anat/sub-mpicbs07_flip-2_mt-off_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-mpicbs07/anat/sub-mpicbs07_flip-2_mt-off_space-other_MTS_label-SC_seg.json index d655844851..80fad709f6 100644 --- a/derivatives/labels/sub-mpicbs07/anat/sub-mpicbs07_flip-2_mt-off_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-mpicbs07/anat/sub-mpicbs07_flip-2_mt-off_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-05 17:21:41" + "Date": "2022-10-05 17:21:41", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-mpicbs07/anat/sub-mpicbs07_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-mpicbs07/anat/sub-mpicbs07_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-mpicbs07/anat/sub-mpicbs07_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-mpicbs07/anat/sub-mpicbs07_space-other_T1w_label-SC_seg.json b/derivatives/labels/sub-mpicbs07/anat/sub-mpicbs07_space-other_T1w_label-SC_seg.json index 4edd10a792..94468380ee 100644 --- a/derivatives/labels/sub-mpicbs07/anat/sub-mpicbs07_space-other_T1w_label-SC_seg.json +++ b/derivatives/labels/sub-mpicbs07/anat/sub-mpicbs07_space-other_T1w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "olivier Morinlupien", - "Date": "2021-06-23 16:13:15" + "Date": "2021-06-23 16:13:15", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-mpicbs07/anat/sub-mpicbs07_space-other_T2star_label-SC_seg.json b/derivatives/labels/sub-mpicbs07/anat/sub-mpicbs07_space-other_T2star_label-SC_seg.json index 9d452f22ce..8ac5899372 100644 --- a/derivatives/labels/sub-mpicbs07/anat/sub-mpicbs07_space-other_T2star_label-SC_seg.json +++ b/derivatives/labels/sub-mpicbs07/anat/sub-mpicbs07_space-other_T2star_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:11" + "Date": "2021-06-08 15:06:11", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-mpicbs07/anat/sub-mpicbs07_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-mpicbs07/anat/sub-mpicbs07_space-other_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-mpicbs07/anat/sub-mpicbs07_space-other_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-mpicbs07/anat/sub-mpicbs07_space-other_T2w_label-SC_seg.json b/derivatives/labels/sub-mpicbs07/anat/sub-mpicbs07_space-other_T2w_label-SC_seg.json index a5cfd91484..81ed84a926 100644 --- a/derivatives/labels/sub-mpicbs07/anat/sub-mpicbs07_space-other_T2w_label-SC_seg.json +++ b/derivatives/labels/sub-mpicbs07/anat/sub-mpicbs07_space-other_T2w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "olivier morinlupien", - "Date": "2021-06-28 10:23:38" + "Date": "2021-06-28 10:23:38", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-mpicbs07/dwi/sub-mpicbs07_rec-average_dwi_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-mpicbs07/dwi/sub-mpicbs07_rec-average_dwi_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-mpicbs07/dwi/sub-mpicbs07_rec-average_dwi_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-nottwil01/anat/sub-nottwil01_flip-1_mt-on_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-nottwil01/anat/sub-nottwil01_flip-1_mt-on_space-other_MTS_label-SC_seg.json index 9d452f22ce..d480be5ed9 100644 --- a/derivatives/labels/sub-nottwil01/anat/sub-nottwil01_flip-1_mt-on_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-nottwil01/anat/sub-nottwil01_flip-1_mt-on_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:11" + "Date": "2021-06-08 15:06:11", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-nottwil01/anat/sub-nottwil01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-nottwil01/anat/sub-nottwil01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-nottwil01/anat/sub-nottwil01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-nottwil01/anat/sub-nottwil01_flip-2_mt-off_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-nottwil01/anat/sub-nottwil01_flip-2_mt-off_space-other_MTS_label-SC_seg.json index 9d452f22ce..d480be5ed9 100644 --- a/derivatives/labels/sub-nottwil01/anat/sub-nottwil01_flip-2_mt-off_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-nottwil01/anat/sub-nottwil01_flip-2_mt-off_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:11" + "Date": "2021-06-08 15:06:11", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-nottwil01/anat/sub-nottwil01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-nottwil01/anat/sub-nottwil01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-nottwil01/anat/sub-nottwil01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-nottwil01/anat/sub-nottwil01_space-other_T1w_label-SC_seg.json b/derivatives/labels/sub-nottwil01/anat/sub-nottwil01_space-other_T1w_label-SC_seg.json index b666aaf591..db298318e0 100644 --- a/derivatives/labels/sub-nottwil01/anat/sub-nottwil01_space-other_T1w_label-SC_seg.json +++ b/derivatives/labels/sub-nottwil01/anat/sub-nottwil01_space-other_T1w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-05 17:25:21" + "Date": "2022-10-05 17:25:21", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-nottwil01/anat/sub-nottwil01_space-other_T2star_gmlabel-SC_seg.json b/derivatives/labels/sub-nottwil01/anat/sub-nottwil01_space-other_T2star_gmlabel-SC_seg.json index c60d60a3aa..c7eaff9285 100644 --- a/derivatives/labels/sub-nottwil01/anat/sub-nottwil01_space-other_T2star_gmlabel-SC_seg.json +++ b/derivatives/labels/sub-nottwil01/anat/sub-nottwil01_space-other_T2star_gmlabel-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-03 10:35:07" + "Date": "2021-06-03 10:35:07", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-nottwil01/anat/sub-nottwil01_space-other_T2star_label-SC_seg.json b/derivatives/labels/sub-nottwil01/anat/sub-nottwil01_space-other_T2star_label-SC_seg.json index 9d452f22ce..8ac5899372 100644 --- a/derivatives/labels/sub-nottwil01/anat/sub-nottwil01_space-other_T2star_label-SC_seg.json +++ b/derivatives/labels/sub-nottwil01/anat/sub-nottwil01_space-other_T2star_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:11" + "Date": "2021-06-08 15:06:11", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-nottwil01/anat/sub-nottwil01_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-nottwil01/anat/sub-nottwil01_space-other_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-nottwil01/anat/sub-nottwil01_space-other_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-nottwil01/anat/sub-nottwil01_space-other_T2w_csflabel-SC_seg.json b/derivatives/labels/sub-nottwil01/anat/sub-nottwil01_space-other_T2w_csflabel-SC_seg.json index 5d72cb8aaa..2edede9801 100644 --- a/derivatives/labels/sub-nottwil01/anat/sub-nottwil01_space-other_T2w_csflabel-SC_seg.json +++ b/derivatives/labels/sub-nottwil01/anat/sub-nottwil01_space-other_T2w_csflabel-SC_seg.json @@ -1,3 +1,7 @@ { - "author": "Charley Gros" -} + "author": "Charley Gros", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/labels/sub-nottwil01/anat/sub-nottwil01_space-other_T2w_label-SC_seg.json b/derivatives/labels/sub-nottwil01/anat/sub-nottwil01_space-other_T2w_label-SC_seg.json index 048837c677..0e60da162a 100644 --- a/derivatives/labels/sub-nottwil01/anat/sub-nottwil01_space-other_T2w_label-SC_seg.json +++ b/derivatives/labels/sub-nottwil01/anat/sub-nottwil01_space-other_T2w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "olivier morinlupien", - "Date": "2021-06-28 10:49:16" + "Date": "2021-06-28 10:49:16", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-nottwil01/dwi/sub-nottwil01_rec-average_dwi_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-nottwil01/dwi/sub-nottwil01_rec-average_dwi_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-nottwil01/dwi/sub-nottwil01_rec-average_dwi_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-nottwil02/anat/sub-nottwil02_flip-1_mt-on_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-nottwil02/anat/sub-nottwil02_flip-1_mt-on_space-other_MTS_label-SC_seg.json index f6ac1cf77e..e9a51f8260 100644 --- a/derivatives/labels/sub-nottwil02/anat/sub-nottwil02_flip-1_mt-on_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-nottwil02/anat/sub-nottwil02_flip-1_mt-on_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-08-04 11:34:50" + "Date": "2021-08-04 11:34:50", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-nottwil02/anat/sub-nottwil02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-nottwil02/anat/sub-nottwil02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-nottwil02/anat/sub-nottwil02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-nottwil02/anat/sub-nottwil02_flip-2_mt-off_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-nottwil02/anat/sub-nottwil02_flip-2_mt-off_space-other_MTS_label-SC_seg.json index f6ed7c7057..a40f367626 100644 --- a/derivatives/labels/sub-nottwil02/anat/sub-nottwil02_flip-2_mt-off_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-nottwil02/anat/sub-nottwil02_flip-2_mt-off_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-08-04 11:33:23" + "Date": "2021-08-04 11:33:23", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-nottwil02/anat/sub-nottwil02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-nottwil02/anat/sub-nottwil02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-nottwil02/anat/sub-nottwil02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-nottwil02/anat/sub-nottwil02_space-other_T1w_label-SC_seg.json b/derivatives/labels/sub-nottwil02/anat/sub-nottwil02_space-other_T1w_label-SC_seg.json index e599fc283e..ca22b74729 100644 --- a/derivatives/labels/sub-nottwil02/anat/sub-nottwil02_space-other_T1w_label-SC_seg.json +++ b/derivatives/labels/sub-nottwil02/anat/sub-nottwil02_space-other_T1w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "olivier ml", - "Date": "2021-06-23 16:25:38" + "Date": "2021-06-23 16:25:38", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-nottwil02/anat/sub-nottwil02_space-other_T2star_label-SC_seg.json b/derivatives/labels/sub-nottwil02/anat/sub-nottwil02_space-other_T2star_label-SC_seg.json index 9d452f22ce..8ac5899372 100644 --- a/derivatives/labels/sub-nottwil02/anat/sub-nottwil02_space-other_T2star_label-SC_seg.json +++ b/derivatives/labels/sub-nottwil02/anat/sub-nottwil02_space-other_T2star_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:11" + "Date": "2021-06-08 15:06:11", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-nottwil02/anat/sub-nottwil02_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-nottwil02/anat/sub-nottwil02_space-other_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-nottwil02/anat/sub-nottwil02_space-other_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-nottwil02/anat/sub-nottwil02_space-other_T2w_label-SC_seg.json b/derivatives/labels/sub-nottwil02/anat/sub-nottwil02_space-other_T2w_label-SC_seg.json index 9d452f22ce..b71b6b5acc 100644 --- a/derivatives/labels/sub-nottwil02/anat/sub-nottwil02_space-other_T2w_label-SC_seg.json +++ b/derivatives/labels/sub-nottwil02/anat/sub-nottwil02_space-other_T2w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:11" + "Date": "2021-06-08 15:06:11", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-nottwil02/dwi/sub-nottwil02_rec-average_dwi_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-nottwil02/dwi/sub-nottwil02_rec-average_dwi_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-nottwil02/dwi/sub-nottwil02_rec-average_dwi_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-nottwil03/anat/sub-nottwil03_flip-1_mt-on_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-nottwil03/anat/sub-nottwil03_flip-1_mt-on_space-other_MTS_label-SC_seg.json index 9d452f22ce..d480be5ed9 100644 --- a/derivatives/labels/sub-nottwil03/anat/sub-nottwil03_flip-1_mt-on_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-nottwil03/anat/sub-nottwil03_flip-1_mt-on_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:11" + "Date": "2021-06-08 15:06:11", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-nottwil03/anat/sub-nottwil03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-nottwil03/anat/sub-nottwil03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-nottwil03/anat/sub-nottwil03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-nottwil03/anat/sub-nottwil03_flip-2_mt-off_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-nottwil03/anat/sub-nottwil03_flip-2_mt-off_space-other_MTS_label-SC_seg.json index 9d452f22ce..d480be5ed9 100644 --- a/derivatives/labels/sub-nottwil03/anat/sub-nottwil03_flip-2_mt-off_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-nottwil03/anat/sub-nottwil03_flip-2_mt-off_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:11" + "Date": "2021-06-08 15:06:11", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-nottwil03/anat/sub-nottwil03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-nottwil03/anat/sub-nottwil03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-nottwil03/anat/sub-nottwil03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-nottwil03/anat/sub-nottwil03_space-other_T1w_label-SC_seg.json b/derivatives/labels/sub-nottwil03/anat/sub-nottwil03_space-other_T1w_label-SC_seg.json index 0ef6be4341..7053836b70 100644 --- a/derivatives/labels/sub-nottwil03/anat/sub-nottwil03_space-other_T1w_label-SC_seg.json +++ b/derivatives/labels/sub-nottwil03/anat/sub-nottwil03_space-other_T1w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-07-08 10:11:28" + "Date": "2021-07-08 10:11:28", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-nottwil03/anat/sub-nottwil03_space-other_T2star_gmlabel-SC_seg.json b/derivatives/labels/sub-nottwil03/anat/sub-nottwil03_space-other_T2star_gmlabel-SC_seg.json index 01859567c7..e339e198ac 100644 --- a/derivatives/labels/sub-nottwil03/anat/sub-nottwil03_space-other_T2star_gmlabel-SC_seg.json +++ b/derivatives/labels/sub-nottwil03/anat/sub-nottwil03_space-other_T2star_gmlabel-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-03 10:34:52" + "Date": "2021-06-03 10:34:52", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-nottwil03/anat/sub-nottwil03_space-other_T2star_label-SC_seg.json b/derivatives/labels/sub-nottwil03/anat/sub-nottwil03_space-other_T2star_label-SC_seg.json index 9d452f22ce..8ac5899372 100644 --- a/derivatives/labels/sub-nottwil03/anat/sub-nottwil03_space-other_T2star_label-SC_seg.json +++ b/derivatives/labels/sub-nottwil03/anat/sub-nottwil03_space-other_T2star_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:11" + "Date": "2021-06-08 15:06:11", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-nottwil03/anat/sub-nottwil03_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-nottwil03/anat/sub-nottwil03_space-other_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-nottwil03/anat/sub-nottwil03_space-other_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-nottwil03/anat/sub-nottwil03_space-other_T2w_csflabel-SC_seg.json b/derivatives/labels/sub-nottwil03/anat/sub-nottwil03_space-other_T2w_csflabel-SC_seg.json index 5d72cb8aaa..2edede9801 100644 --- a/derivatives/labels/sub-nottwil03/anat/sub-nottwil03_space-other_T2w_csflabel-SC_seg.json +++ b/derivatives/labels/sub-nottwil03/anat/sub-nottwil03_space-other_T2w_csflabel-SC_seg.json @@ -1,3 +1,7 @@ { - "author": "Charley Gros" -} + "author": "Charley Gros", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/labels/sub-nottwil03/anat/sub-nottwil03_space-other_T2w_label-SC_seg.json b/derivatives/labels/sub-nottwil03/anat/sub-nottwil03_space-other_T2w_label-SC_seg.json index 9366f2ecdf..03bc8cecd6 100644 --- a/derivatives/labels/sub-nottwil03/anat/sub-nottwil03_space-other_T2w_label-SC_seg.json +++ b/derivatives/labels/sub-nottwil03/anat/sub-nottwil03_space-other_T2w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "olivier morinlupien", - "Date": "2021-06-28 10:28:01" + "Date": "2021-06-28 10:28:01", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-nottwil03/dwi/sub-nottwil03_rec-average_dwi_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-nottwil03/dwi/sub-nottwil03_rec-average_dwi_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-nottwil03/dwi/sub-nottwil03_rec-average_dwi_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-nottwil04/anat/sub-nottwil04_flip-1_mt-on_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-nottwil04/anat/sub-nottwil04_flip-1_mt-on_space-other_MTS_label-SC_seg.json index 235520901f..1ecff82942 100644 --- a/derivatives/labels/sub-nottwil04/anat/sub-nottwil04_flip-1_mt-on_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-nottwil04/anat/sub-nottwil04_flip-1_mt-on_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Olivier MorinLupien", - "Date": "2021-07-05 13:48:30" + "Date": "2021-07-05 13:48:30", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-nottwil04/anat/sub-nottwil04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-nottwil04/anat/sub-nottwil04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-nottwil04/anat/sub-nottwil04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-nottwil04/anat/sub-nottwil04_flip-2_mt-off_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-nottwil04/anat/sub-nottwil04_flip-2_mt-off_space-other_MTS_label-SC_seg.json index 8d12a41495..b04a2e1d36 100644 --- a/derivatives/labels/sub-nottwil04/anat/sub-nottwil04_flip-2_mt-off_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-nottwil04/anat/sub-nottwil04_flip-2_mt-off_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-07-08 10:23:23" + "Date": "2021-07-08 10:23:23", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-nottwil04/anat/sub-nottwil04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-nottwil04/anat/sub-nottwil04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-nottwil04/anat/sub-nottwil04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-nottwil04/anat/sub-nottwil04_space-other_T1w_label-SC_seg.json b/derivatives/labels/sub-nottwil04/anat/sub-nottwil04_space-other_T1w_label-SC_seg.json index 57523338b7..c459431b00 100644 --- a/derivatives/labels/sub-nottwil04/anat/sub-nottwil04_space-other_T1w_label-SC_seg.json +++ b/derivatives/labels/sub-nottwil04/anat/sub-nottwil04_space-other_T1w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-08-04 11:12:31" + "Date": "2021-08-04 11:12:31", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-nottwil04/anat/sub-nottwil04_space-other_T2star_label-SC_seg.json b/derivatives/labels/sub-nottwil04/anat/sub-nottwil04_space-other_T2star_label-SC_seg.json index 8b93ee93e3..7c9e0d08a4 100644 --- a/derivatives/labels/sub-nottwil04/anat/sub-nottwil04_space-other_T2star_label-SC_seg.json +++ b/derivatives/labels/sub-nottwil04/anat/sub-nottwil04_space-other_T2star_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:12" + "Date": "2021-06-08 15:06:12", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-nottwil04/anat/sub-nottwil04_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-nottwil04/anat/sub-nottwil04_space-other_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-nottwil04/anat/sub-nottwil04_space-other_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-nottwil04/anat/sub-nottwil04_space-other_T2w_csflabel-SC_seg.json b/derivatives/labels/sub-nottwil04/anat/sub-nottwil04_space-other_T2w_csflabel-SC_seg.json index 5d72cb8aaa..2edede9801 100644 --- a/derivatives/labels/sub-nottwil04/anat/sub-nottwil04_space-other_T2w_csflabel-SC_seg.json +++ b/derivatives/labels/sub-nottwil04/anat/sub-nottwil04_space-other_T2w_csflabel-SC_seg.json @@ -1,3 +1,7 @@ { - "author": "Charley Gros" -} + "author": "Charley Gros", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/labels/sub-nottwil04/anat/sub-nottwil04_space-other_T2w_label-SC_seg.json b/derivatives/labels/sub-nottwil04/anat/sub-nottwil04_space-other_T2w_label-SC_seg.json index 7e93cfface..9e38262f0e 100644 --- a/derivatives/labels/sub-nottwil04/anat/sub-nottwil04_space-other_T2w_label-SC_seg.json +++ b/derivatives/labels/sub-nottwil04/anat/sub-nottwil04_space-other_T2w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "olivier morinlupien", - "Date": "2021-06-28 10:49:59" + "Date": "2021-06-28 10:49:59", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-nottwil04/dwi/sub-nottwil04_rec-average_dwi_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-nottwil04/dwi/sub-nottwil04_rec-average_dwi_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-nottwil04/dwi/sub-nottwil04_rec-average_dwi_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-nottwil05/anat/sub-nottwil05_flip-1_mt-on_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-nottwil05/anat/sub-nottwil05_flip-1_mt-on_space-other_MTS_label-SC_seg.json index 8b93ee93e3..a70e325d44 100644 --- a/derivatives/labels/sub-nottwil05/anat/sub-nottwil05_flip-1_mt-on_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-nottwil05/anat/sub-nottwil05_flip-1_mt-on_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:12" + "Date": "2021-06-08 15:06:12", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-nottwil05/anat/sub-nottwil05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-nottwil05/anat/sub-nottwil05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-nottwil05/anat/sub-nottwil05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-nottwil05/anat/sub-nottwil05_flip-2_mt-off_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-nottwil05/anat/sub-nottwil05_flip-2_mt-off_space-other_MTS_label-SC_seg.json index 8b93ee93e3..a70e325d44 100644 --- a/derivatives/labels/sub-nottwil05/anat/sub-nottwil05_flip-2_mt-off_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-nottwil05/anat/sub-nottwil05_flip-2_mt-off_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:12" + "Date": "2021-06-08 15:06:12", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-nottwil05/anat/sub-nottwil05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-nottwil05/anat/sub-nottwil05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-nottwil05/anat/sub-nottwil05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-nottwil05/anat/sub-nottwil05_space-other_T1w_label-SC_seg.json b/derivatives/labels/sub-nottwil05/anat/sub-nottwil05_space-other_T1w_label-SC_seg.json index b4f8d87e46..485de4bbf0 100644 --- a/derivatives/labels/sub-nottwil05/anat/sub-nottwil05_space-other_T1w_label-SC_seg.json +++ b/derivatives/labels/sub-nottwil05/anat/sub-nottwil05_space-other_T1w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-08-04 12:57:31" + "Date": "2021-08-04 12:57:31", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-nottwil05/anat/sub-nottwil05_space-other_T2star_label-SC_seg.json b/derivatives/labels/sub-nottwil05/anat/sub-nottwil05_space-other_T2star_label-SC_seg.json index 8b93ee93e3..7c9e0d08a4 100644 --- a/derivatives/labels/sub-nottwil05/anat/sub-nottwil05_space-other_T2star_label-SC_seg.json +++ b/derivatives/labels/sub-nottwil05/anat/sub-nottwil05_space-other_T2star_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:12" + "Date": "2021-06-08 15:06:12", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-nottwil05/anat/sub-nottwil05_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-nottwil05/anat/sub-nottwil05_space-other_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-nottwil05/anat/sub-nottwil05_space-other_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-nottwil05/anat/sub-nottwil05_space-other_T2w_label-SC_seg.json b/derivatives/labels/sub-nottwil05/anat/sub-nottwil05_space-other_T2w_label-SC_seg.json index 8b93ee93e3..8c2d9da1a2 100644 --- a/derivatives/labels/sub-nottwil05/anat/sub-nottwil05_space-other_T2w_label-SC_seg.json +++ b/derivatives/labels/sub-nottwil05/anat/sub-nottwil05_space-other_T2w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:12" + "Date": "2021-06-08 15:06:12", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-nottwil05/dwi/sub-nottwil05_rec-average_dwi_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-nottwil05/dwi/sub-nottwil05_rec-average_dwi_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-nottwil05/dwi/sub-nottwil05_rec-average_dwi_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-nottwil06/anat/sub-nottwil06_flip-1_mt-on_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-nottwil06/anat/sub-nottwil06_flip-1_mt-on_space-other_MTS_label-SC_seg.json index 8b93ee93e3..a70e325d44 100644 --- a/derivatives/labels/sub-nottwil06/anat/sub-nottwil06_flip-1_mt-on_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-nottwil06/anat/sub-nottwil06_flip-1_mt-on_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:12" + "Date": "2021-06-08 15:06:12", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-nottwil06/anat/sub-nottwil06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-nottwil06/anat/sub-nottwil06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-nottwil06/anat/sub-nottwil06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-nottwil06/anat/sub-nottwil06_flip-2_mt-off_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-nottwil06/anat/sub-nottwil06_flip-2_mt-off_space-other_MTS_label-SC_seg.json index cf46467c5d..46bdd33118 100644 --- a/derivatives/labels/sub-nottwil06/anat/sub-nottwil06_flip-2_mt-off_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-nottwil06/anat/sub-nottwil06_flip-2_mt-off_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Olivier MorinLupien", - "Date": "2021-07-05 13:35:14" + "Date": "2021-07-05 13:35:14", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-nottwil06/anat/sub-nottwil06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-nottwil06/anat/sub-nottwil06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-nottwil06/anat/sub-nottwil06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-nottwil06/anat/sub-nottwil06_space-other_T1w_label-SC_seg.json b/derivatives/labels/sub-nottwil06/anat/sub-nottwil06_space-other_T1w_label-SC_seg.json index 5f19f68373..4c43c5e872 100644 --- a/derivatives/labels/sub-nottwil06/anat/sub-nottwil06_space-other_T1w_label-SC_seg.json +++ b/derivatives/labels/sub-nottwil06/anat/sub-nottwil06_space-other_T1w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "olivier ml", - "Date": "2021-06-23 16:16:22" + "Date": "2021-06-23 16:16:22", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-nottwil06/anat/sub-nottwil06_space-other_T2star_label-SC_seg.json b/derivatives/labels/sub-nottwil06/anat/sub-nottwil06_space-other_T2star_label-SC_seg.json index 8b93ee93e3..7c9e0d08a4 100644 --- a/derivatives/labels/sub-nottwil06/anat/sub-nottwil06_space-other_T2star_label-SC_seg.json +++ b/derivatives/labels/sub-nottwil06/anat/sub-nottwil06_space-other_T2star_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:12" + "Date": "2021-06-08 15:06:12", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-nottwil06/anat/sub-nottwil06_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-nottwil06/anat/sub-nottwil06_space-other_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-nottwil06/anat/sub-nottwil06_space-other_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-nottwil06/anat/sub-nottwil06_space-other_T2w_label-SC_seg.json b/derivatives/labels/sub-nottwil06/anat/sub-nottwil06_space-other_T2w_label-SC_seg.json index 8b93ee93e3..8c2d9da1a2 100644 --- a/derivatives/labels/sub-nottwil06/anat/sub-nottwil06_space-other_T2w_label-SC_seg.json +++ b/derivatives/labels/sub-nottwil06/anat/sub-nottwil06_space-other_T2w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:12" + "Date": "2021-06-08 15:06:12", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-nottwil06/dwi/sub-nottwil06_rec-average_dwi_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-nottwil06/dwi/sub-nottwil06_rec-average_dwi_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-nottwil06/dwi/sub-nottwil06_rec-average_dwi_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-nwu01/anat/sub-nwu01_flip-1_mt-on_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-nwu01/anat/sub-nwu01_flip-1_mt-on_space-other_MTS_label-SC_seg.json index 8b93ee93e3..a70e325d44 100644 --- a/derivatives/labels/sub-nwu01/anat/sub-nwu01_flip-1_mt-on_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-nwu01/anat/sub-nwu01_flip-1_mt-on_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:12" + "Date": "2021-06-08 15:06:12", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-nwu01/anat/sub-nwu01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-nwu01/anat/sub-nwu01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-nwu01/anat/sub-nwu01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-nwu01/anat/sub-nwu01_flip-2_mt-off_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-nwu01/anat/sub-nwu01_flip-2_mt-off_space-other_MTS_label-SC_seg.json index 8b93ee93e3..a70e325d44 100644 --- a/derivatives/labels/sub-nwu01/anat/sub-nwu01_flip-2_mt-off_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-nwu01/anat/sub-nwu01_flip-2_mt-off_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:12" + "Date": "2021-06-08 15:06:12", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-nwu01/anat/sub-nwu01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-nwu01/anat/sub-nwu01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-nwu01/anat/sub-nwu01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-nwu01/anat/sub-nwu01_space-other_T1w_label-SC_seg.json b/derivatives/labels/sub-nwu01/anat/sub-nwu01_space-other_T1w_label-SC_seg.json index fd08930da6..e2ab9ae48f 100644 --- a/derivatives/labels/sub-nwu01/anat/sub-nwu01_space-other_T1w_label-SC_seg.json +++ b/derivatives/labels/sub-nwu01/anat/sub-nwu01_space-other_T1w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-08-04 11:41:33" + "Date": "2021-08-04 11:41:33", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-nwu01/anat/sub-nwu01_space-other_T2star_label-SC_seg.json b/derivatives/labels/sub-nwu01/anat/sub-nwu01_space-other_T2star_label-SC_seg.json index 8b93ee93e3..7c9e0d08a4 100644 --- a/derivatives/labels/sub-nwu01/anat/sub-nwu01_space-other_T2star_label-SC_seg.json +++ b/derivatives/labels/sub-nwu01/anat/sub-nwu01_space-other_T2star_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:12" + "Date": "2021-06-08 15:06:12", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-nwu01/anat/sub-nwu01_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-nwu01/anat/sub-nwu01_space-other_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-nwu01/anat/sub-nwu01_space-other_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-nwu01/anat/sub-nwu01_space-other_T2w_label-SC_seg.json b/derivatives/labels/sub-nwu01/anat/sub-nwu01_space-other_T2w_label-SC_seg.json index d1db2fa475..b7123563c7 100644 --- a/derivatives/labels/sub-nwu01/anat/sub-nwu01_space-other_T2w_label-SC_seg.json +++ b/derivatives/labels/sub-nwu01/anat/sub-nwu01_space-other_T2w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "olivier morinlupien", - "Date": "2021-06-28 10:39:30" + "Date": "2021-06-28 10:39:30", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-nwu01/dwi/sub-nwu01_rec-average_dwi_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-nwu01/dwi/sub-nwu01_rec-average_dwi_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-nwu01/dwi/sub-nwu01_rec-average_dwi_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-nwu02/anat/sub-nwu02_flip-1_mt-on_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-nwu02/anat/sub-nwu02_flip-1_mt-on_space-other_MTS_label-SC_seg.json index 8b93ee93e3..a70e325d44 100644 --- a/derivatives/labels/sub-nwu02/anat/sub-nwu02_flip-1_mt-on_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-nwu02/anat/sub-nwu02_flip-1_mt-on_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:12" + "Date": "2021-06-08 15:06:12", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-nwu02/anat/sub-nwu02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-nwu02/anat/sub-nwu02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-nwu02/anat/sub-nwu02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-nwu02/anat/sub-nwu02_flip-2_mt-off_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-nwu02/anat/sub-nwu02_flip-2_mt-off_space-other_MTS_label-SC_seg.json index 552b87d198..e99c6bd3a6 100644 --- a/derivatives/labels/sub-nwu02/anat/sub-nwu02_flip-2_mt-off_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-nwu02/anat/sub-nwu02_flip-2_mt-off_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-03 10:35:15" + "Date": "2021-06-03 10:35:15", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-nwu02/anat/sub-nwu02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-nwu02/anat/sub-nwu02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-nwu02/anat/sub-nwu02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-nwu02/anat/sub-nwu02_space-other_T1w_label-SC_seg.json b/derivatives/labels/sub-nwu02/anat/sub-nwu02_space-other_T1w_label-SC_seg.json index c39c6b55c9..b34a859d33 100644 --- a/derivatives/labels/sub-nwu02/anat/sub-nwu02_space-other_T1w_label-SC_seg.json +++ b/derivatives/labels/sub-nwu02/anat/sub-nwu02_space-other_T1w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "olivier Morinlupien", - "Date": "2021-06-23 16:11:20" + "Date": "2021-06-23 16:11:20", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-nwu02/anat/sub-nwu02_space-other_T2star_label-SC_seg.json b/derivatives/labels/sub-nwu02/anat/sub-nwu02_space-other_T2star_label-SC_seg.json index 8b93ee93e3..7c9e0d08a4 100644 --- a/derivatives/labels/sub-nwu02/anat/sub-nwu02_space-other_T2star_label-SC_seg.json +++ b/derivatives/labels/sub-nwu02/anat/sub-nwu02_space-other_T2star_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:12" + "Date": "2021-06-08 15:06:12", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-nwu02/anat/sub-nwu02_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-nwu02/anat/sub-nwu02_space-other_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-nwu02/anat/sub-nwu02_space-other_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-nwu02/anat/sub-nwu02_space-other_T2w_label-SC_seg.json b/derivatives/labels/sub-nwu02/anat/sub-nwu02_space-other_T2w_label-SC_seg.json index b13e7b5a30..56d6a6b14c 100644 --- a/derivatives/labels/sub-nwu02/anat/sub-nwu02_space-other_T2w_label-SC_seg.json +++ b/derivatives/labels/sub-nwu02/anat/sub-nwu02_space-other_T2w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "olivier morinlupien", - "Date": "2021-06-28 10:22:15" + "Date": "2021-06-28 10:22:15", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-nwu02/dwi/sub-nwu02_rec-average_dwi_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-nwu02/dwi/sub-nwu02_rec-average_dwi_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-nwu02/dwi/sub-nwu02_rec-average_dwi_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-nwu03/anat/sub-nwu03_flip-1_mt-on_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-nwu03/anat/sub-nwu03_flip-1_mt-on_space-other_MTS_label-SC_seg.json index 8b93ee93e3..a70e325d44 100644 --- a/derivatives/labels/sub-nwu03/anat/sub-nwu03_flip-1_mt-on_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-nwu03/anat/sub-nwu03_flip-1_mt-on_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:12" + "Date": "2021-06-08 15:06:12", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-nwu03/anat/sub-nwu03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-nwu03/anat/sub-nwu03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-nwu03/anat/sub-nwu03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-nwu03/anat/sub-nwu03_flip-2_mt-off_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-nwu03/anat/sub-nwu03_flip-2_mt-off_space-other_MTS_label-SC_seg.json index 0af67b4a4f..335e88fb9d 100644 --- a/derivatives/labels/sub-nwu03/anat/sub-nwu03_flip-2_mt-off_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-nwu03/anat/sub-nwu03_flip-2_mt-off_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-07-08 10:17:11" + "Date": "2021-07-08 10:17:11", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-nwu03/anat/sub-nwu03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-nwu03/anat/sub-nwu03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-nwu03/anat/sub-nwu03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-nwu03/anat/sub-nwu03_space-other_T1w_label-SC_seg.json b/derivatives/labels/sub-nwu03/anat/sub-nwu03_space-other_T1w_label-SC_seg.json index f218eb070c..0a6ae8ec35 100644 --- a/derivatives/labels/sub-nwu03/anat/sub-nwu03_space-other_T1w_label-SC_seg.json +++ b/derivatives/labels/sub-nwu03/anat/sub-nwu03_space-other_T1w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "olivier Morinlupien", - "Date": "2021-06-23 16:12:05" + "Date": "2021-06-23 16:12:05", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-nwu03/anat/sub-nwu03_space-other_T2star_label-SC_seg.json b/derivatives/labels/sub-nwu03/anat/sub-nwu03_space-other_T2star_label-SC_seg.json index 8b93ee93e3..7c9e0d08a4 100644 --- a/derivatives/labels/sub-nwu03/anat/sub-nwu03_space-other_T2star_label-SC_seg.json +++ b/derivatives/labels/sub-nwu03/anat/sub-nwu03_space-other_T2star_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:12" + "Date": "2021-06-08 15:06:12", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-nwu03/anat/sub-nwu03_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-nwu03/anat/sub-nwu03_space-other_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-nwu03/anat/sub-nwu03_space-other_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-nwu03/anat/sub-nwu03_space-other_T2w_label-SC_seg.json b/derivatives/labels/sub-nwu03/anat/sub-nwu03_space-other_T2w_label-SC_seg.json index 39217d962e..f16338c4b5 100644 --- a/derivatives/labels/sub-nwu03/anat/sub-nwu03_space-other_T2w_label-SC_seg.json +++ b/derivatives/labels/sub-nwu03/anat/sub-nwu03_space-other_T2w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "olivier morinlupien", - "Date": "2021-06-28 10:25:11" + "Date": "2021-06-28 10:25:11", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-nwu03/dwi/sub-nwu03_rec-average_dwi_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-nwu03/dwi/sub-nwu03_rec-average_dwi_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-nwu03/dwi/sub-nwu03_rec-average_dwi_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-nwu04/anat/sub-nwu04_flip-1_mt-on_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-nwu04/anat/sub-nwu04_flip-1_mt-on_space-other_MTS_label-SC_seg.json index 8b93ee93e3..a70e325d44 100644 --- a/derivatives/labels/sub-nwu04/anat/sub-nwu04_flip-1_mt-on_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-nwu04/anat/sub-nwu04_flip-1_mt-on_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:12" + "Date": "2021-06-08 15:06:12", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-nwu04/anat/sub-nwu04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-nwu04/anat/sub-nwu04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-nwu04/anat/sub-nwu04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-nwu04/anat/sub-nwu04_flip-2_mt-off_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-nwu04/anat/sub-nwu04_flip-2_mt-off_space-other_MTS_label-SC_seg.json index 8b93ee93e3..a70e325d44 100644 --- a/derivatives/labels/sub-nwu04/anat/sub-nwu04_flip-2_mt-off_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-nwu04/anat/sub-nwu04_flip-2_mt-off_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:12" + "Date": "2021-06-08 15:06:12", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-nwu04/anat/sub-nwu04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-nwu04/anat/sub-nwu04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-nwu04/anat/sub-nwu04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-nwu04/anat/sub-nwu04_space-other_T1w_label-SC_seg.json b/derivatives/labels/sub-nwu04/anat/sub-nwu04_space-other_T1w_label-SC_seg.json index 2d81bd1eca..f047468487 100644 --- a/derivatives/labels/sub-nwu04/anat/sub-nwu04_space-other_T1w_label-SC_seg.json +++ b/derivatives/labels/sub-nwu04/anat/sub-nwu04_space-other_T1w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "olivier ml", - "Date": "2021-06-23 16:19:07" + "Date": "2021-06-23 16:19:07", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-nwu04/anat/sub-nwu04_space-other_T2star_label-SC_seg.json b/derivatives/labels/sub-nwu04/anat/sub-nwu04_space-other_T2star_label-SC_seg.json index 8b93ee93e3..7c9e0d08a4 100644 --- a/derivatives/labels/sub-nwu04/anat/sub-nwu04_space-other_T2star_label-SC_seg.json +++ b/derivatives/labels/sub-nwu04/anat/sub-nwu04_space-other_T2star_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:12" + "Date": "2021-06-08 15:06:12", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-nwu04/anat/sub-nwu04_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-nwu04/anat/sub-nwu04_space-other_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-nwu04/anat/sub-nwu04_space-other_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-nwu04/anat/sub-nwu04_space-other_T2w_label-SC_seg.json b/derivatives/labels/sub-nwu04/anat/sub-nwu04_space-other_T2w_label-SC_seg.json index e086eb2744..cf25de9965 100644 --- a/derivatives/labels/sub-nwu04/anat/sub-nwu04_space-other_T2w_label-SC_seg.json +++ b/derivatives/labels/sub-nwu04/anat/sub-nwu04_space-other_T2w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "olivier morinlupien", - "Date": "2021-06-28 10:40:55" + "Date": "2021-06-28 10:40:55", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-nwu04/dwi/sub-nwu04_rec-average_dwi_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-nwu04/dwi/sub-nwu04_rec-average_dwi_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-nwu04/dwi/sub-nwu04_rec-average_dwi_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-nwu05/anat/sub-nwu05_flip-1_mt-on_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-nwu05/anat/sub-nwu05_flip-1_mt-on_space-other_MTS_label-SC_seg.json index 8673af9321..1060d325c3 100644 --- a/derivatives/labels/sub-nwu05/anat/sub-nwu05_flip-1_mt-on_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-nwu05/anat/sub-nwu05_flip-1_mt-on_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Olivier MorinLupien", - "Date": "2021-07-05 13:45:26" + "Date": "2021-07-05 13:45:26", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-nwu05/anat/sub-nwu05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-nwu05/anat/sub-nwu05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-nwu05/anat/sub-nwu05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-nwu05/anat/sub-nwu05_flip-2_mt-off_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-nwu05/anat/sub-nwu05_flip-2_mt-off_space-other_MTS_label-SC_seg.json index 8b93ee93e3..a70e325d44 100644 --- a/derivatives/labels/sub-nwu05/anat/sub-nwu05_flip-2_mt-off_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-nwu05/anat/sub-nwu05_flip-2_mt-off_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:12" + "Date": "2021-06-08 15:06:12", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-nwu05/anat/sub-nwu05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-nwu05/anat/sub-nwu05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-nwu05/anat/sub-nwu05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-nwu05/anat/sub-nwu05_space-other_T1w_label-SC_seg.json b/derivatives/labels/sub-nwu05/anat/sub-nwu05_space-other_T1w_label-SC_seg.json index d5b3f7c73d..d92c1bf29e 100644 --- a/derivatives/labels/sub-nwu05/anat/sub-nwu05_space-other_T1w_label-SC_seg.json +++ b/derivatives/labels/sub-nwu05/anat/sub-nwu05_space-other_T1w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "olivier ml", - "Date": "2021-06-23 16:21:31" + "Date": "2021-06-23 16:21:31", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-nwu05/anat/sub-nwu05_space-other_T2star_label-SC_seg.json b/derivatives/labels/sub-nwu05/anat/sub-nwu05_space-other_T2star_label-SC_seg.json index 8b93ee93e3..7c9e0d08a4 100644 --- a/derivatives/labels/sub-nwu05/anat/sub-nwu05_space-other_T2star_label-SC_seg.json +++ b/derivatives/labels/sub-nwu05/anat/sub-nwu05_space-other_T2star_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:12" + "Date": "2021-06-08 15:06:12", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-nwu05/anat/sub-nwu05_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-nwu05/anat/sub-nwu05_space-other_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-nwu05/anat/sub-nwu05_space-other_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-nwu05/anat/sub-nwu05_space-other_T2w_label-SC_seg.json b/derivatives/labels/sub-nwu05/anat/sub-nwu05_space-other_T2w_label-SC_seg.json index 6919434f55..3aaa9e382d 100644 --- a/derivatives/labels/sub-nwu05/anat/sub-nwu05_space-other_T2w_label-SC_seg.json +++ b/derivatives/labels/sub-nwu05/anat/sub-nwu05_space-other_T2w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "olivier morinlupien", - "Date": "2021-06-28 10:26:01" + "Date": "2021-06-28 10:26:01", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-nwu05/dwi/sub-nwu05_rec-average_dwi_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-nwu05/dwi/sub-nwu05_rec-average_dwi_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-nwu05/dwi/sub-nwu05_rec-average_dwi_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-nwu06/anat/sub-nwu06_flip-1_mt-on_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-nwu06/anat/sub-nwu06_flip-1_mt-on_space-other_MTS_label-SC_seg.json index 0f818f7b35..8c5607af6a 100644 --- a/derivatives/labels/sub-nwu06/anat/sub-nwu06_flip-1_mt-on_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-nwu06/anat/sub-nwu06_flip-1_mt-on_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:13" + "Date": "2021-06-08 15:06:13", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-nwu06/anat/sub-nwu06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-nwu06/anat/sub-nwu06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-nwu06/anat/sub-nwu06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-nwu06/anat/sub-nwu06_flip-2_mt-off_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-nwu06/anat/sub-nwu06_flip-2_mt-off_space-other_MTS_label-SC_seg.json index 2f55f1dc87..5dec99eb16 100644 --- a/derivatives/labels/sub-nwu06/anat/sub-nwu06_flip-2_mt-off_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-nwu06/anat/sub-nwu06_flip-2_mt-off_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Olivier MorinLupien", - "Date": "2021-07-05 13:36:25" + "Date": "2021-07-05 13:36:25", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-nwu06/anat/sub-nwu06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-nwu06/anat/sub-nwu06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-nwu06/anat/sub-nwu06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-nwu06/anat/sub-nwu06_space-other_T1w_label-SC_seg.json b/derivatives/labels/sub-nwu06/anat/sub-nwu06_space-other_T1w_label-SC_seg.json index abfe0c70b3..6928c01316 100644 --- a/derivatives/labels/sub-nwu06/anat/sub-nwu06_space-other_T1w_label-SC_seg.json +++ b/derivatives/labels/sub-nwu06/anat/sub-nwu06_space-other_T1w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "olivier ml", - "Date": "2021-06-23 16:14:37" + "Date": "2021-06-23 16:14:37", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-nwu06/anat/sub-nwu06_space-other_T2star_label-SC_seg.json b/derivatives/labels/sub-nwu06/anat/sub-nwu06_space-other_T2star_label-SC_seg.json index 0f818f7b35..d85605a4ca 100644 --- a/derivatives/labels/sub-nwu06/anat/sub-nwu06_space-other_T2star_label-SC_seg.json +++ b/derivatives/labels/sub-nwu06/anat/sub-nwu06_space-other_T2star_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:13" + "Date": "2021-06-08 15:06:13", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-nwu06/anat/sub-nwu06_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-nwu06/anat/sub-nwu06_space-other_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-nwu06/anat/sub-nwu06_space-other_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-nwu06/anat/sub-nwu06_space-other_T2w_label-SC_seg.json b/derivatives/labels/sub-nwu06/anat/sub-nwu06_space-other_T2w_label-SC_seg.json index b8f8c88fb8..54c556e88f 100644 --- a/derivatives/labels/sub-nwu06/anat/sub-nwu06_space-other_T2w_label-SC_seg.json +++ b/derivatives/labels/sub-nwu06/anat/sub-nwu06_space-other_T2w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-08-04 11:07:04" + "Date": "2021-08-04 11:07:04", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-nwu06/dwi/sub-nwu06_rec-average_dwi_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-nwu06/dwi/sub-nwu06_rec-average_dwi_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-nwu06/dwi/sub-nwu06_rec-average_dwi_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-oxfordFmrib01/anat/sub-oxfordFmrib01_flip-1_mt-on_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-oxfordFmrib01/anat/sub-oxfordFmrib01_flip-1_mt-on_space-other_MTS_label-SC_seg.json index a166a78cc9..2453ab8160 100644 --- a/derivatives/labels/sub-oxfordFmrib01/anat/sub-oxfordFmrib01_flip-1_mt-on_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-oxfordFmrib01/anat/sub-oxfordFmrib01_flip-1_mt-on_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-08-04 11:08:41" + "Date": "2021-08-04 11:08:41", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-oxfordFmrib01/anat/sub-oxfordFmrib01_flip-2_mt-off_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-oxfordFmrib01/anat/sub-oxfordFmrib01_flip-2_mt-off_space-other_MTS_label-SC_seg.json index fee362d017..8c4e9f4241 100644 --- a/derivatives/labels/sub-oxfordFmrib01/anat/sub-oxfordFmrib01_flip-2_mt-off_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-oxfordFmrib01/anat/sub-oxfordFmrib01_flip-2_mt-off_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-05 17:52:32" + "Date": "2022-10-05 17:52:32", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-oxfordFmrib01/anat/sub-oxfordFmrib01_space-other_T1w_label-SC_seg.json b/derivatives/labels/sub-oxfordFmrib01/anat/sub-oxfordFmrib01_space-other_T1w_label-SC_seg.json index 843b6a68ad..69569453b8 100644 --- a/derivatives/labels/sub-oxfordFmrib01/anat/sub-oxfordFmrib01_space-other_T1w_label-SC_seg.json +++ b/derivatives/labels/sub-oxfordFmrib01/anat/sub-oxfordFmrib01_space-other_T1w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-05 17:50:55" + "Date": "2022-10-05 17:50:55", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-oxfordFmrib01/anat/sub-oxfordFmrib01_space-other_T2star_label-SC_seg.json b/derivatives/labels/sub-oxfordFmrib01/anat/sub-oxfordFmrib01_space-other_T2star_label-SC_seg.json index 0f818f7b35..d85605a4ca 100644 --- a/derivatives/labels/sub-oxfordFmrib01/anat/sub-oxfordFmrib01_space-other_T2star_label-SC_seg.json +++ b/derivatives/labels/sub-oxfordFmrib01/anat/sub-oxfordFmrib01_space-other_T2star_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:13" + "Date": "2021-06-08 15:06:13", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-oxfordFmrib01/anat/sub-oxfordFmrib01_space-other_T2w_label-SC_seg.json b/derivatives/labels/sub-oxfordFmrib01/anat/sub-oxfordFmrib01_space-other_T2w_label-SC_seg.json index 6e90ad5708..65089db7ea 100644 --- a/derivatives/labels/sub-oxfordFmrib01/anat/sub-oxfordFmrib01_space-other_T2w_label-SC_seg.json +++ b/derivatives/labels/sub-oxfordFmrib01/anat/sub-oxfordFmrib01_space-other_T2w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "olivier morinlupien", - "Date": "2021-06-28 10:45:52" + "Date": "2021-06-28 10:45:52", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-oxfordFmrib02/anat/sub-oxfordFmrib02_flip-1_mt-on_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-oxfordFmrib02/anat/sub-oxfordFmrib02_flip-1_mt-on_space-other_MTS_label-SC_seg.json index 0f818f7b35..8c5607af6a 100644 --- a/derivatives/labels/sub-oxfordFmrib02/anat/sub-oxfordFmrib02_flip-1_mt-on_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-oxfordFmrib02/anat/sub-oxfordFmrib02_flip-1_mt-on_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:13" + "Date": "2021-06-08 15:06:13", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-oxfordFmrib02/anat/sub-oxfordFmrib02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-oxfordFmrib02/anat/sub-oxfordFmrib02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-oxfordFmrib02/anat/sub-oxfordFmrib02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-oxfordFmrib02/anat/sub-oxfordFmrib02_flip-2_mt-off_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-oxfordFmrib02/anat/sub-oxfordFmrib02_flip-2_mt-off_space-other_MTS_label-SC_seg.json index af3a9e0fda..d7656ffe19 100644 --- a/derivatives/labels/sub-oxfordFmrib02/anat/sub-oxfordFmrib02_flip-2_mt-off_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-oxfordFmrib02/anat/sub-oxfordFmrib02_flip-2_mt-off_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-05 17:57:09" + "Date": "2022-10-05 17:57:09", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-oxfordFmrib02/anat/sub-oxfordFmrib02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-oxfordFmrib02/anat/sub-oxfordFmrib02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-oxfordFmrib02/anat/sub-oxfordFmrib02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-oxfordFmrib02/anat/sub-oxfordFmrib02_space-other_T1w_label-SC_seg.json b/derivatives/labels/sub-oxfordFmrib02/anat/sub-oxfordFmrib02_space-other_T1w_label-SC_seg.json index 5cd9b62ecc..8dcbb43583 100644 --- a/derivatives/labels/sub-oxfordFmrib02/anat/sub-oxfordFmrib02_space-other_T1w_label-SC_seg.json +++ b/derivatives/labels/sub-oxfordFmrib02/anat/sub-oxfordFmrib02_space-other_T1w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "olivier ml", - "Date": "2021-06-23 16:22:28" + "Date": "2021-06-23 16:22:28", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-oxfordFmrib02/anat/sub-oxfordFmrib02_space-other_T2star_label-SC_seg.json b/derivatives/labels/sub-oxfordFmrib02/anat/sub-oxfordFmrib02_space-other_T2star_label-SC_seg.json index 0f818f7b35..d85605a4ca 100644 --- a/derivatives/labels/sub-oxfordFmrib02/anat/sub-oxfordFmrib02_space-other_T2star_label-SC_seg.json +++ b/derivatives/labels/sub-oxfordFmrib02/anat/sub-oxfordFmrib02_space-other_T2star_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:13" + "Date": "2021-06-08 15:06:13", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-oxfordFmrib02/anat/sub-oxfordFmrib02_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-oxfordFmrib02/anat/sub-oxfordFmrib02_space-other_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-oxfordFmrib02/anat/sub-oxfordFmrib02_space-other_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-oxfordFmrib02/anat/sub-oxfordFmrib02_space-other_T2w_label-SC_seg.json b/derivatives/labels/sub-oxfordFmrib02/anat/sub-oxfordFmrib02_space-other_T2w_label-SC_seg.json index a3bd4fbae3..a359cb6693 100644 --- a/derivatives/labels/sub-oxfordFmrib02/anat/sub-oxfordFmrib02_space-other_T2w_label-SC_seg.json +++ b/derivatives/labels/sub-oxfordFmrib02/anat/sub-oxfordFmrib02_space-other_T2w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "olivier morinlupien", - "Date": "2021-06-28 10:43:37" + "Date": "2021-06-28 10:43:37", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-oxfordFmrib02/dwi/sub-oxfordFmrib02_rec-average_dwi_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-oxfordFmrib02/dwi/sub-oxfordFmrib02_rec-average_dwi_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-oxfordFmrib02/dwi/sub-oxfordFmrib02_rec-average_dwi_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-oxfordFmrib03/anat/sub-oxfordFmrib03_flip-1_mt-on_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-oxfordFmrib03/anat/sub-oxfordFmrib03_flip-1_mt-on_space-other_MTS_label-SC_seg.json index 0f818f7b35..8c5607af6a 100644 --- a/derivatives/labels/sub-oxfordFmrib03/anat/sub-oxfordFmrib03_flip-1_mt-on_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-oxfordFmrib03/anat/sub-oxfordFmrib03_flip-1_mt-on_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:13" + "Date": "2021-06-08 15:06:13", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-oxfordFmrib03/anat/sub-oxfordFmrib03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-oxfordFmrib03/anat/sub-oxfordFmrib03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-oxfordFmrib03/anat/sub-oxfordFmrib03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-oxfordFmrib03/anat/sub-oxfordFmrib03_flip-2_mt-off_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-oxfordFmrib03/anat/sub-oxfordFmrib03_flip-2_mt-off_space-other_MTS_label-SC_seg.json index 0f818f7b35..8c5607af6a 100644 --- a/derivatives/labels/sub-oxfordFmrib03/anat/sub-oxfordFmrib03_flip-2_mt-off_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-oxfordFmrib03/anat/sub-oxfordFmrib03_flip-2_mt-off_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:13" + "Date": "2021-06-08 15:06:13", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-oxfordFmrib03/anat/sub-oxfordFmrib03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-oxfordFmrib03/anat/sub-oxfordFmrib03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-oxfordFmrib03/anat/sub-oxfordFmrib03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-oxfordFmrib03/anat/sub-oxfordFmrib03_space-other_T1w_label-SC_seg.json b/derivatives/labels/sub-oxfordFmrib03/anat/sub-oxfordFmrib03_space-other_T1w_label-SC_seg.json index bafb2b5134..6afa8be718 100644 --- a/derivatives/labels/sub-oxfordFmrib03/anat/sub-oxfordFmrib03_space-other_T1w_label-SC_seg.json +++ b/derivatives/labels/sub-oxfordFmrib03/anat/sub-oxfordFmrib03_space-other_T1w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "olivier ml", - "Date": "2021-06-23 16:20:47" + "Date": "2021-06-23 16:20:47", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-oxfordFmrib03/anat/sub-oxfordFmrib03_space-other_T2star_label-SC_seg.json b/derivatives/labels/sub-oxfordFmrib03/anat/sub-oxfordFmrib03_space-other_T2star_label-SC_seg.json index 0f818f7b35..d85605a4ca 100644 --- a/derivatives/labels/sub-oxfordFmrib03/anat/sub-oxfordFmrib03_space-other_T2star_label-SC_seg.json +++ b/derivatives/labels/sub-oxfordFmrib03/anat/sub-oxfordFmrib03_space-other_T2star_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:13" + "Date": "2021-06-08 15:06:13", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-oxfordFmrib03/anat/sub-oxfordFmrib03_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-oxfordFmrib03/anat/sub-oxfordFmrib03_space-other_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-oxfordFmrib03/anat/sub-oxfordFmrib03_space-other_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-oxfordFmrib03/anat/sub-oxfordFmrib03_space-other_T2w_label-SC_seg.json b/derivatives/labels/sub-oxfordFmrib03/anat/sub-oxfordFmrib03_space-other_T2w_label-SC_seg.json index ce122a3694..e35afe2179 100644 --- a/derivatives/labels/sub-oxfordFmrib03/anat/sub-oxfordFmrib03_space-other_T2w_label-SC_seg.json +++ b/derivatives/labels/sub-oxfordFmrib03/anat/sub-oxfordFmrib03_space-other_T2w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "olivier morinlupien", - "Date": "2021-06-28 10:48:15" + "Date": "2021-06-28 10:48:15", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-oxfordFmrib03/dwi/sub-oxfordFmrib03_rec-average_dwi_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-oxfordFmrib03/dwi/sub-oxfordFmrib03_rec-average_dwi_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-oxfordFmrib03/dwi/sub-oxfordFmrib03_rec-average_dwi_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-oxfordFmrib04/anat/sub-oxfordFmrib04_flip-1_mt-on_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-oxfordFmrib04/anat/sub-oxfordFmrib04_flip-1_mt-on_space-other_MTS_label-SC_seg.json index 1f6aa1e62b..70d0072d2b 100644 --- a/derivatives/labels/sub-oxfordFmrib04/anat/sub-oxfordFmrib04_flip-1_mt-on_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-oxfordFmrib04/anat/sub-oxfordFmrib04_flip-1_mt-on_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Olivier MorinLupien", - "Date": "2021-07-05 13:49:05" + "Date": "2021-07-05 13:49:05", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-oxfordFmrib04/anat/sub-oxfordFmrib04_flip-2_mt-off_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-oxfordFmrib04/anat/sub-oxfordFmrib04_flip-2_mt-off_space-other_MTS_label-SC_seg.json index 0f818f7b35..8c5607af6a 100644 --- a/derivatives/labels/sub-oxfordFmrib04/anat/sub-oxfordFmrib04_flip-2_mt-off_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-oxfordFmrib04/anat/sub-oxfordFmrib04_flip-2_mt-off_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:13" + "Date": "2021-06-08 15:06:13", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-oxfordFmrib04/anat/sub-oxfordFmrib04_space-other_T1w_label-SC_seg.json b/derivatives/labels/sub-oxfordFmrib04/anat/sub-oxfordFmrib04_space-other_T1w_label-SC_seg.json index 00ad0540e1..9f513b3695 100644 --- a/derivatives/labels/sub-oxfordFmrib04/anat/sub-oxfordFmrib04_space-other_T1w_label-SC_seg.json +++ b/derivatives/labels/sub-oxfordFmrib04/anat/sub-oxfordFmrib04_space-other_T1w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "olivier ml", - "Date": "2021-06-23 16:27:48" + "Date": "2021-06-23 16:27:48", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-oxfordFmrib04/anat/sub-oxfordFmrib04_space-other_T2star_label-SC_seg.json b/derivatives/labels/sub-oxfordFmrib04/anat/sub-oxfordFmrib04_space-other_T2star_label-SC_seg.json index 0f818f7b35..d85605a4ca 100644 --- a/derivatives/labels/sub-oxfordFmrib04/anat/sub-oxfordFmrib04_space-other_T2star_label-SC_seg.json +++ b/derivatives/labels/sub-oxfordFmrib04/anat/sub-oxfordFmrib04_space-other_T2star_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:13" + "Date": "2021-06-08 15:06:13", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-oxfordFmrib04/anat/sub-oxfordFmrib04_space-other_T2w_label-SC_seg.json b/derivatives/labels/sub-oxfordFmrib04/anat/sub-oxfordFmrib04_space-other_T2w_label-SC_seg.json index 075efac036..8bebca07c0 100644 --- a/derivatives/labels/sub-oxfordFmrib04/anat/sub-oxfordFmrib04_space-other_T2w_label-SC_seg.json +++ b/derivatives/labels/sub-oxfordFmrib04/anat/sub-oxfordFmrib04_space-other_T2w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Olivier MorinLupien", - "Date": "2021-07-05 13:34:36" + "Date": "2021-07-05 13:34:36", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-oxfordFmrib05/anat/sub-oxfordFmrib05_flip-1_mt-on_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-oxfordFmrib05/anat/sub-oxfordFmrib05_flip-1_mt-on_space-other_MTS_label-SC_seg.json index 0f818f7b35..8c5607af6a 100644 --- a/derivatives/labels/sub-oxfordFmrib05/anat/sub-oxfordFmrib05_flip-1_mt-on_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-oxfordFmrib05/anat/sub-oxfordFmrib05_flip-1_mt-on_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:13" + "Date": "2021-06-08 15:06:13", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-oxfordFmrib05/anat/sub-oxfordFmrib05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-oxfordFmrib05/anat/sub-oxfordFmrib05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-oxfordFmrib05/anat/sub-oxfordFmrib05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-oxfordFmrib05/anat/sub-oxfordFmrib05_flip-2_mt-off_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-oxfordFmrib05/anat/sub-oxfordFmrib05_flip-2_mt-off_space-other_MTS_label-SC_seg.json index 9706fa8ad1..8e4714eb65 100644 --- a/derivatives/labels/sub-oxfordFmrib05/anat/sub-oxfordFmrib05_flip-2_mt-off_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-oxfordFmrib05/anat/sub-oxfordFmrib05_flip-2_mt-off_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Olivier MorinLupien", - "Date": "2021-07-05 13:46:12" + "Date": "2021-07-05 13:46:12", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-oxfordFmrib05/anat/sub-oxfordFmrib05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-oxfordFmrib05/anat/sub-oxfordFmrib05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-oxfordFmrib05/anat/sub-oxfordFmrib05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-oxfordFmrib05/anat/sub-oxfordFmrib05_space-other_T1w_label-SC_seg.json b/derivatives/labels/sub-oxfordFmrib05/anat/sub-oxfordFmrib05_space-other_T1w_label-SC_seg.json index 4d9dbbe6d6..e061edaa84 100644 --- a/derivatives/labels/sub-oxfordFmrib05/anat/sub-oxfordFmrib05_space-other_T1w_label-SC_seg.json +++ b/derivatives/labels/sub-oxfordFmrib05/anat/sub-oxfordFmrib05_space-other_T1w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "olivier ml", - "Date": "2021-06-23 16:31:41" + "Date": "2021-06-23 16:31:41", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-oxfordFmrib05/anat/sub-oxfordFmrib05_space-other_T2star_label-SC_seg.json b/derivatives/labels/sub-oxfordFmrib05/anat/sub-oxfordFmrib05_space-other_T2star_label-SC_seg.json index 0f818f7b35..d85605a4ca 100644 --- a/derivatives/labels/sub-oxfordFmrib05/anat/sub-oxfordFmrib05_space-other_T2star_label-SC_seg.json +++ b/derivatives/labels/sub-oxfordFmrib05/anat/sub-oxfordFmrib05_space-other_T2star_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:13" + "Date": "2021-06-08 15:06:13", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-oxfordFmrib05/anat/sub-oxfordFmrib05_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-oxfordFmrib05/anat/sub-oxfordFmrib05_space-other_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-oxfordFmrib05/anat/sub-oxfordFmrib05_space-other_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-oxfordFmrib05/anat/sub-oxfordFmrib05_space-other_T2w_label-SC_seg.json b/derivatives/labels/sub-oxfordFmrib05/anat/sub-oxfordFmrib05_space-other_T2w_label-SC_seg.json index e45f39ebc9..9a83fce819 100644 --- a/derivatives/labels/sub-oxfordFmrib05/anat/sub-oxfordFmrib05_space-other_T2w_label-SC_seg.json +++ b/derivatives/labels/sub-oxfordFmrib05/anat/sub-oxfordFmrib05_space-other_T2w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Olivier MorinLupien", - "Date": "2021-07-05 13:39:11" + "Date": "2021-07-05 13:39:11", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-oxfordFmrib05/dwi/sub-oxfordFmrib05_rec-average_dwi_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-oxfordFmrib05/dwi/sub-oxfordFmrib05_rec-average_dwi_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-oxfordFmrib05/dwi/sub-oxfordFmrib05_rec-average_dwi_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-oxfordFmrib06/anat/sub-oxfordFmrib06_flip-1_mt-on_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-oxfordFmrib06/anat/sub-oxfordFmrib06_flip-1_mt-on_space-other_MTS_label-SC_seg.json index 0f818f7b35..8c5607af6a 100644 --- a/derivatives/labels/sub-oxfordFmrib06/anat/sub-oxfordFmrib06_flip-1_mt-on_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-oxfordFmrib06/anat/sub-oxfordFmrib06_flip-1_mt-on_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:13" + "Date": "2021-06-08 15:06:13", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-oxfordFmrib06/anat/sub-oxfordFmrib06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-oxfordFmrib06/anat/sub-oxfordFmrib06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-oxfordFmrib06/anat/sub-oxfordFmrib06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-oxfordFmrib06/anat/sub-oxfordFmrib06_flip-2_mt-off_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-oxfordFmrib06/anat/sub-oxfordFmrib06_flip-2_mt-off_space-other_MTS_label-SC_seg.json index 81ff1849c1..70f3b81b8f 100644 --- a/derivatives/labels/sub-oxfordFmrib06/anat/sub-oxfordFmrib06_flip-2_mt-off_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-oxfordFmrib06/anat/sub-oxfordFmrib06_flip-2_mt-off_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Olivier MorinLupien", - "Date": "2021-07-05 13:47:31" + "Date": "2021-07-05 13:47:31", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-oxfordFmrib06/anat/sub-oxfordFmrib06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-oxfordFmrib06/anat/sub-oxfordFmrib06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-oxfordFmrib06/anat/sub-oxfordFmrib06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-oxfordFmrib06/anat/sub-oxfordFmrib06_space-other_T1w_label-SC_seg.json b/derivatives/labels/sub-oxfordFmrib06/anat/sub-oxfordFmrib06_space-other_T1w_label-SC_seg.json index b7831fd922..6827c5ddf2 100644 --- a/derivatives/labels/sub-oxfordFmrib06/anat/sub-oxfordFmrib06_space-other_T1w_label-SC_seg.json +++ b/derivatives/labels/sub-oxfordFmrib06/anat/sub-oxfordFmrib06_space-other_T1w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "olivier ml", - "Date": "2021-06-23 16:36:09" + "Date": "2021-06-23 16:36:09", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-oxfordFmrib06/anat/sub-oxfordFmrib06_space-other_T2star_label-SC_seg.json b/derivatives/labels/sub-oxfordFmrib06/anat/sub-oxfordFmrib06_space-other_T2star_label-SC_seg.json index 0f818f7b35..d85605a4ca 100644 --- a/derivatives/labels/sub-oxfordFmrib06/anat/sub-oxfordFmrib06_space-other_T2star_label-SC_seg.json +++ b/derivatives/labels/sub-oxfordFmrib06/anat/sub-oxfordFmrib06_space-other_T2star_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:13" + "Date": "2021-06-08 15:06:13", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-oxfordFmrib06/anat/sub-oxfordFmrib06_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-oxfordFmrib06/anat/sub-oxfordFmrib06_space-other_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-oxfordFmrib06/anat/sub-oxfordFmrib06_space-other_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-oxfordFmrib06/anat/sub-oxfordFmrib06_space-other_T2w_label-SC_seg.json b/derivatives/labels/sub-oxfordFmrib06/anat/sub-oxfordFmrib06_space-other_T2w_label-SC_seg.json index 0e7c451ace..e3b185de19 100644 --- a/derivatives/labels/sub-oxfordFmrib06/anat/sub-oxfordFmrib06_space-other_T2w_label-SC_seg.json +++ b/derivatives/labels/sub-oxfordFmrib06/anat/sub-oxfordFmrib06_space-other_T2w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Olivier MorinLupien", - "Date": "2021-07-05 13:40:30" + "Date": "2021-07-05 13:40:30", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-oxfordFmrib06/dwi/sub-oxfordFmrib06_rec-average_dwi_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-oxfordFmrib06/dwi/sub-oxfordFmrib06_rec-average_dwi_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-oxfordFmrib06/dwi/sub-oxfordFmrib06_rec-average_dwi_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-oxfordFmrib07/anat/sub-oxfordFmrib07_flip-1_mt-on_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-oxfordFmrib07/anat/sub-oxfordFmrib07_flip-1_mt-on_space-other_MTS_label-SC_seg.json index 0f818f7b35..8c5607af6a 100644 --- a/derivatives/labels/sub-oxfordFmrib07/anat/sub-oxfordFmrib07_flip-1_mt-on_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-oxfordFmrib07/anat/sub-oxfordFmrib07_flip-1_mt-on_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:13" + "Date": "2021-06-08 15:06:13", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-oxfordFmrib07/anat/sub-oxfordFmrib07_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-oxfordFmrib07/anat/sub-oxfordFmrib07_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-oxfordFmrib07/anat/sub-oxfordFmrib07_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-oxfordFmrib07/anat/sub-oxfordFmrib07_flip-2_mt-off_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-oxfordFmrib07/anat/sub-oxfordFmrib07_flip-2_mt-off_space-other_MTS_label-SC_seg.json index 0f818f7b35..8c5607af6a 100644 --- a/derivatives/labels/sub-oxfordFmrib07/anat/sub-oxfordFmrib07_flip-2_mt-off_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-oxfordFmrib07/anat/sub-oxfordFmrib07_flip-2_mt-off_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:13" + "Date": "2021-06-08 15:06:13", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-oxfordFmrib07/anat/sub-oxfordFmrib07_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-oxfordFmrib07/anat/sub-oxfordFmrib07_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-oxfordFmrib07/anat/sub-oxfordFmrib07_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-oxfordFmrib07/anat/sub-oxfordFmrib07_space-other_T1w_label-SC_seg.json b/derivatives/labels/sub-oxfordFmrib07/anat/sub-oxfordFmrib07_space-other_T1w_label-SC_seg.json index f20b0068da..1f9b8d6b53 100644 --- a/derivatives/labels/sub-oxfordFmrib07/anat/sub-oxfordFmrib07_space-other_T1w_label-SC_seg.json +++ b/derivatives/labels/sub-oxfordFmrib07/anat/sub-oxfordFmrib07_space-other_T1w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-07-08 10:10:11" + "Date": "2021-07-08 10:10:11", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-oxfordFmrib07/anat/sub-oxfordFmrib07_space-other_T2star_label-SC_seg.json b/derivatives/labels/sub-oxfordFmrib07/anat/sub-oxfordFmrib07_space-other_T2star_label-SC_seg.json index 0f818f7b35..d85605a4ca 100644 --- a/derivatives/labels/sub-oxfordFmrib07/anat/sub-oxfordFmrib07_space-other_T2star_label-SC_seg.json +++ b/derivatives/labels/sub-oxfordFmrib07/anat/sub-oxfordFmrib07_space-other_T2star_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:13" + "Date": "2021-06-08 15:06:13", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-oxfordFmrib07/anat/sub-oxfordFmrib07_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-oxfordFmrib07/anat/sub-oxfordFmrib07_space-other_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-oxfordFmrib07/anat/sub-oxfordFmrib07_space-other_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-oxfordFmrib07/anat/sub-oxfordFmrib07_space-other_T2w_label-SC_seg.json b/derivatives/labels/sub-oxfordFmrib07/anat/sub-oxfordFmrib07_space-other_T2w_label-SC_seg.json index 0f818f7b35..ca2f7567e2 100644 --- a/derivatives/labels/sub-oxfordFmrib07/anat/sub-oxfordFmrib07_space-other_T2w_label-SC_seg.json +++ b/derivatives/labels/sub-oxfordFmrib07/anat/sub-oxfordFmrib07_space-other_T2w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:13" + "Date": "2021-06-08 15:06:13", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-oxfordFmrib07/dwi/sub-oxfordFmrib07_rec-average_dwi_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-oxfordFmrib07/dwi/sub-oxfordFmrib07_rec-average_dwi_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-oxfordFmrib07/dwi/sub-oxfordFmrib07_rec-average_dwi_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-oxfordFmrib08/anat/sub-oxfordFmrib08_flip-1_mt-on_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-oxfordFmrib08/anat/sub-oxfordFmrib08_flip-1_mt-on_space-other_MTS_label-SC_seg.json index f893b6d7c0..b7edf53e66 100644 --- a/derivatives/labels/sub-oxfordFmrib08/anat/sub-oxfordFmrib08_flip-1_mt-on_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-oxfordFmrib08/anat/sub-oxfordFmrib08_flip-1_mt-on_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:14" + "Date": "2021-06-08 15:06:14", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-oxfordFmrib08/anat/sub-oxfordFmrib08_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-oxfordFmrib08/anat/sub-oxfordFmrib08_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-oxfordFmrib08/anat/sub-oxfordFmrib08_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-oxfordFmrib08/anat/sub-oxfordFmrib08_flip-2_mt-off_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-oxfordFmrib08/anat/sub-oxfordFmrib08_flip-2_mt-off_space-other_MTS_label-SC_seg.json index eb017131e1..53d557737d 100644 --- a/derivatives/labels/sub-oxfordFmrib08/anat/sub-oxfordFmrib08_flip-2_mt-off_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-oxfordFmrib08/anat/sub-oxfordFmrib08_flip-2_mt-off_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-05 18:00:37" + "Date": "2022-10-05 18:00:37", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-oxfordFmrib08/anat/sub-oxfordFmrib08_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-oxfordFmrib08/anat/sub-oxfordFmrib08_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-oxfordFmrib08/anat/sub-oxfordFmrib08_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-oxfordFmrib08/anat/sub-oxfordFmrib08_space-other_T1w_label-SC_seg.json b/derivatives/labels/sub-oxfordFmrib08/anat/sub-oxfordFmrib08_space-other_T1w_label-SC_seg.json index 7ce498d79d..c0f9686d1a 100644 --- a/derivatives/labels/sub-oxfordFmrib08/anat/sub-oxfordFmrib08_space-other_T1w_label-SC_seg.json +++ b/derivatives/labels/sub-oxfordFmrib08/anat/sub-oxfordFmrib08_space-other_T1w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "olivier ml", - "Date": "2021-06-23 16:37:58" + "Date": "2021-06-23 16:37:58", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-oxfordFmrib08/anat/sub-oxfordFmrib08_space-other_T2star_label-SC_seg.json b/derivatives/labels/sub-oxfordFmrib08/anat/sub-oxfordFmrib08_space-other_T2star_label-SC_seg.json index f893b6d7c0..5e4755fd10 100644 --- a/derivatives/labels/sub-oxfordFmrib08/anat/sub-oxfordFmrib08_space-other_T2star_label-SC_seg.json +++ b/derivatives/labels/sub-oxfordFmrib08/anat/sub-oxfordFmrib08_space-other_T2star_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:14" + "Date": "2021-06-08 15:06:14", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-oxfordFmrib08/anat/sub-oxfordFmrib08_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-oxfordFmrib08/anat/sub-oxfordFmrib08_space-other_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-oxfordFmrib08/anat/sub-oxfordFmrib08_space-other_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-oxfordFmrib08/anat/sub-oxfordFmrib08_space-other_T2w_label-SC_seg.json b/derivatives/labels/sub-oxfordFmrib08/anat/sub-oxfordFmrib08_space-other_T2w_label-SC_seg.json index b78e812185..46be68496e 100644 --- a/derivatives/labels/sub-oxfordFmrib08/anat/sub-oxfordFmrib08_space-other_T2w_label-SC_seg.json +++ b/derivatives/labels/sub-oxfordFmrib08/anat/sub-oxfordFmrib08_space-other_T2w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Olivier MorinLupien", - "Date": "2021-07-05 13:44:01" + "Date": "2021-07-05 13:44:01", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-oxfordFmrib08/dwi/sub-oxfordFmrib08_rec-average_dwi_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-oxfordFmrib08/dwi/sub-oxfordFmrib08_rec-average_dwi_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-oxfordFmrib08/dwi/sub-oxfordFmrib08_rec-average_dwi_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-oxfordFmrib09/anat/sub-oxfordFmrib09_flip-1_mt-on_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-oxfordFmrib09/anat/sub-oxfordFmrib09_flip-1_mt-on_space-other_MTS_label-SC_seg.json index 3e9e9af66c..425f5799f2 100644 --- a/derivatives/labels/sub-oxfordFmrib09/anat/sub-oxfordFmrib09_flip-1_mt-on_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-oxfordFmrib09/anat/sub-oxfordFmrib09_flip-1_mt-on_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-07-08 10:27:20" + "Date": "2021-07-08 10:27:20", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-oxfordFmrib09/anat/sub-oxfordFmrib09_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-oxfordFmrib09/anat/sub-oxfordFmrib09_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-oxfordFmrib09/anat/sub-oxfordFmrib09_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-oxfordFmrib09/anat/sub-oxfordFmrib09_flip-2_mt-off_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-oxfordFmrib09/anat/sub-oxfordFmrib09_flip-2_mt-off_space-other_MTS_label-SC_seg.json index 993074c3ba..022d3880d3 100644 --- a/derivatives/labels/sub-oxfordFmrib09/anat/sub-oxfordFmrib09_flip-2_mt-off_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-oxfordFmrib09/anat/sub-oxfordFmrib09_flip-2_mt-off_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-06 09:39:01" + "Date": "2022-10-06 09:39:01", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-oxfordFmrib09/anat/sub-oxfordFmrib09_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-oxfordFmrib09/anat/sub-oxfordFmrib09_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-oxfordFmrib09/anat/sub-oxfordFmrib09_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-oxfordFmrib09/anat/sub-oxfordFmrib09_space-other_T1w_label-SC_seg.json b/derivatives/labels/sub-oxfordFmrib09/anat/sub-oxfordFmrib09_space-other_T1w_label-SC_seg.json index 0afadde30d..14340a151d 100644 --- a/derivatives/labels/sub-oxfordFmrib09/anat/sub-oxfordFmrib09_space-other_T1w_label-SC_seg.json +++ b/derivatives/labels/sub-oxfordFmrib09/anat/sub-oxfordFmrib09_space-other_T1w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Olivier MorinLupien", - "Date": "2021-07-05 13:51:56" + "Date": "2021-07-05 13:51:56", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-oxfordFmrib09/anat/sub-oxfordFmrib09_space-other_T2star_label-SC_seg.json b/derivatives/labels/sub-oxfordFmrib09/anat/sub-oxfordFmrib09_space-other_T2star_label-SC_seg.json index f893b6d7c0..5e4755fd10 100644 --- a/derivatives/labels/sub-oxfordFmrib09/anat/sub-oxfordFmrib09_space-other_T2star_label-SC_seg.json +++ b/derivatives/labels/sub-oxfordFmrib09/anat/sub-oxfordFmrib09_space-other_T2star_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:14" + "Date": "2021-06-08 15:06:14", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-oxfordFmrib09/anat/sub-oxfordFmrib09_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-oxfordFmrib09/anat/sub-oxfordFmrib09_space-other_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-oxfordFmrib09/anat/sub-oxfordFmrib09_space-other_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-oxfordFmrib09/anat/sub-oxfordFmrib09_space-other_T2w_label-SC_seg.json b/derivatives/labels/sub-oxfordFmrib09/anat/sub-oxfordFmrib09_space-other_T2w_label-SC_seg.json index 9fd61a06dd..802388ed08 100644 --- a/derivatives/labels/sub-oxfordFmrib09/anat/sub-oxfordFmrib09_space-other_T2w_label-SC_seg.json +++ b/derivatives/labels/sub-oxfordFmrib09/anat/sub-oxfordFmrib09_space-other_T2w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Olivier MorinLupien", - "Date": "2021-07-05 14:04:02" + "Date": "2021-07-05 14:04:02", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-oxfordFmrib09/dwi/sub-oxfordFmrib09_rec-average_dwi_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-oxfordFmrib09/dwi/sub-oxfordFmrib09_rec-average_dwi_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-oxfordFmrib09/dwi/sub-oxfordFmrib09_rec-average_dwi_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-oxfordFmrib10/anat/sub-oxfordFmrib10_flip-1_mt-on_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-oxfordFmrib10/anat/sub-oxfordFmrib10_flip-1_mt-on_space-other_MTS_label-SC_seg.json index f893b6d7c0..b7edf53e66 100644 --- a/derivatives/labels/sub-oxfordFmrib10/anat/sub-oxfordFmrib10_flip-1_mt-on_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-oxfordFmrib10/anat/sub-oxfordFmrib10_flip-1_mt-on_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:14" + "Date": "2021-06-08 15:06:14", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-oxfordFmrib10/anat/sub-oxfordFmrib10_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-oxfordFmrib10/anat/sub-oxfordFmrib10_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-oxfordFmrib10/anat/sub-oxfordFmrib10_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-oxfordFmrib10/anat/sub-oxfordFmrib10_flip-2_mt-off_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-oxfordFmrib10/anat/sub-oxfordFmrib10_flip-2_mt-off_space-other_MTS_label-SC_seg.json index 122d0df491..3f7d79c16a 100644 --- a/derivatives/labels/sub-oxfordFmrib10/anat/sub-oxfordFmrib10_flip-2_mt-off_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-oxfordFmrib10/anat/sub-oxfordFmrib10_flip-2_mt-off_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-06 10:09:27" + "Date": "2022-10-06 10:09:27", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-oxfordFmrib10/anat/sub-oxfordFmrib10_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-oxfordFmrib10/anat/sub-oxfordFmrib10_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-oxfordFmrib10/anat/sub-oxfordFmrib10_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-oxfordFmrib10/anat/sub-oxfordFmrib10_space-other_T1w_label-SC_seg.json b/derivatives/labels/sub-oxfordFmrib10/anat/sub-oxfordFmrib10_space-other_T1w_label-SC_seg.json index 18f52ca5c9..3150dfbef5 100644 --- a/derivatives/labels/sub-oxfordFmrib10/anat/sub-oxfordFmrib10_space-other_T1w_label-SC_seg.json +++ b/derivatives/labels/sub-oxfordFmrib10/anat/sub-oxfordFmrib10_space-other_T1w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Olivier MorinLupien", - "Date": "2021-07-05 13:54:00" + "Date": "2021-07-05 13:54:00", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-oxfordFmrib10/anat/sub-oxfordFmrib10_space-other_T2star_label-SC_seg.json b/derivatives/labels/sub-oxfordFmrib10/anat/sub-oxfordFmrib10_space-other_T2star_label-SC_seg.json index f893b6d7c0..5e4755fd10 100644 --- a/derivatives/labels/sub-oxfordFmrib10/anat/sub-oxfordFmrib10_space-other_T2star_label-SC_seg.json +++ b/derivatives/labels/sub-oxfordFmrib10/anat/sub-oxfordFmrib10_space-other_T2star_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:14" + "Date": "2021-06-08 15:06:14", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-oxfordFmrib10/anat/sub-oxfordFmrib10_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-oxfordFmrib10/anat/sub-oxfordFmrib10_space-other_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-oxfordFmrib10/anat/sub-oxfordFmrib10_space-other_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-oxfordFmrib10/anat/sub-oxfordFmrib10_space-other_T2w_label-SC_seg.json b/derivatives/labels/sub-oxfordFmrib10/anat/sub-oxfordFmrib10_space-other_T2w_label-SC_seg.json index 8f1c7b6d1d..bfe9ab060f 100644 --- a/derivatives/labels/sub-oxfordFmrib10/anat/sub-oxfordFmrib10_space-other_T2w_label-SC_seg.json +++ b/derivatives/labels/sub-oxfordFmrib10/anat/sub-oxfordFmrib10_space-other_T2w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "olivier MorinLupien", - "Date": "2021-07-05 14:08:32" + "Date": "2021-07-05 14:08:32", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-oxfordFmrib10/dwi/sub-oxfordFmrib10_rec-average_dwi_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-oxfordFmrib10/dwi/sub-oxfordFmrib10_rec-average_dwi_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-oxfordFmrib10/dwi/sub-oxfordFmrib10_rec-average_dwi_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-oxfordFmrib11/anat/sub-oxfordFmrib11_flip-1_mt-on_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-oxfordFmrib11/anat/sub-oxfordFmrib11_flip-1_mt-on_space-other_MTS_label-SC_seg.json index f893b6d7c0..b7edf53e66 100644 --- a/derivatives/labels/sub-oxfordFmrib11/anat/sub-oxfordFmrib11_flip-1_mt-on_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-oxfordFmrib11/anat/sub-oxfordFmrib11_flip-1_mt-on_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:14" + "Date": "2021-06-08 15:06:14", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-oxfordFmrib11/anat/sub-oxfordFmrib11_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-oxfordFmrib11/anat/sub-oxfordFmrib11_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-oxfordFmrib11/anat/sub-oxfordFmrib11_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-oxfordFmrib11/anat/sub-oxfordFmrib11_flip-2_mt-off_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-oxfordFmrib11/anat/sub-oxfordFmrib11_flip-2_mt-off_space-other_MTS_label-SC_seg.json index 7589b2ab0f..bddfbf4d3b 100644 --- a/derivatives/labels/sub-oxfordFmrib11/anat/sub-oxfordFmrib11_flip-2_mt-off_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-oxfordFmrib11/anat/sub-oxfordFmrib11_flip-2_mt-off_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "olivier MorinLupien", - "Date": "2021-07-05 14:11:32" + "Date": "2021-07-05 14:11:32", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-oxfordFmrib11/anat/sub-oxfordFmrib11_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-oxfordFmrib11/anat/sub-oxfordFmrib11_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-oxfordFmrib11/anat/sub-oxfordFmrib11_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-oxfordFmrib11/anat/sub-oxfordFmrib11_space-other_T1w_label-SC_seg.json b/derivatives/labels/sub-oxfordFmrib11/anat/sub-oxfordFmrib11_space-other_T1w_label-SC_seg.json index 0431562339..3a5d39850e 100644 --- a/derivatives/labels/sub-oxfordFmrib11/anat/sub-oxfordFmrib11_space-other_T1w_label-SC_seg.json +++ b/derivatives/labels/sub-oxfordFmrib11/anat/sub-oxfordFmrib11_space-other_T1w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Olivier MorinLupien", - "Date": "2021-07-05 13:55:25" + "Date": "2021-07-05 13:55:25", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-oxfordFmrib11/anat/sub-oxfordFmrib11_space-other_T2star_label-SC_seg.json b/derivatives/labels/sub-oxfordFmrib11/anat/sub-oxfordFmrib11_space-other_T2star_label-SC_seg.json index f893b6d7c0..5e4755fd10 100644 --- a/derivatives/labels/sub-oxfordFmrib11/anat/sub-oxfordFmrib11_space-other_T2star_label-SC_seg.json +++ b/derivatives/labels/sub-oxfordFmrib11/anat/sub-oxfordFmrib11_space-other_T2star_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:14" + "Date": "2021-06-08 15:06:14", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-oxfordFmrib11/anat/sub-oxfordFmrib11_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-oxfordFmrib11/anat/sub-oxfordFmrib11_space-other_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-oxfordFmrib11/anat/sub-oxfordFmrib11_space-other_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-oxfordFmrib11/anat/sub-oxfordFmrib11_space-other_T2w_label-SC_seg.json b/derivatives/labels/sub-oxfordFmrib11/anat/sub-oxfordFmrib11_space-other_T2w_label-SC_seg.json index f893b6d7c0..88aded3abc 100644 --- a/derivatives/labels/sub-oxfordFmrib11/anat/sub-oxfordFmrib11_space-other_T2w_label-SC_seg.json +++ b/derivatives/labels/sub-oxfordFmrib11/anat/sub-oxfordFmrib11_space-other_T2w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:14" + "Date": "2021-06-08 15:06:14", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-oxfordFmrib11/dwi/sub-oxfordFmrib11_rec-average_dwi_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-oxfordFmrib11/dwi/sub-oxfordFmrib11_rec-average_dwi_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-oxfordFmrib11/dwi/sub-oxfordFmrib11_rec-average_dwi_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-oxfordOhba01/anat/sub-oxfordOhba01_flip-1_mt-on_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-oxfordOhba01/anat/sub-oxfordOhba01_flip-1_mt-on_space-other_MTS_label-SC_seg.json index f893b6d7c0..b7edf53e66 100644 --- a/derivatives/labels/sub-oxfordOhba01/anat/sub-oxfordOhba01_flip-1_mt-on_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-oxfordOhba01/anat/sub-oxfordOhba01_flip-1_mt-on_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:14" + "Date": "2021-06-08 15:06:14", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-oxfordOhba01/anat/sub-oxfordOhba01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-oxfordOhba01/anat/sub-oxfordOhba01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-oxfordOhba01/anat/sub-oxfordOhba01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-oxfordOhba01/anat/sub-oxfordOhba01_flip-2_mt-off_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-oxfordOhba01/anat/sub-oxfordOhba01_flip-2_mt-off_space-other_MTS_label-SC_seg.json index df2d4f880a..2f21da8bd5 100644 --- a/derivatives/labels/sub-oxfordOhba01/anat/sub-oxfordOhba01_flip-2_mt-off_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-oxfordOhba01/anat/sub-oxfordOhba01_flip-2_mt-off_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "olivier MorinLupien", - "Date": "2021-07-05 14:10:47" + "Date": "2021-07-05 14:10:47", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-oxfordOhba01/anat/sub-oxfordOhba01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-oxfordOhba01/anat/sub-oxfordOhba01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-oxfordOhba01/anat/sub-oxfordOhba01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-oxfordOhba01/anat/sub-oxfordOhba01_space-other_T1w_label-SC_seg.json b/derivatives/labels/sub-oxfordOhba01/anat/sub-oxfordOhba01_space-other_T1w_label-SC_seg.json index 09bae127a2..a54530bd9c 100644 --- a/derivatives/labels/sub-oxfordOhba01/anat/sub-oxfordOhba01_space-other_T1w_label-SC_seg.json +++ b/derivatives/labels/sub-oxfordOhba01/anat/sub-oxfordOhba01_space-other_T1w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Olivier MorinLupien", - "Date": "2021-07-05 13:56:55" + "Date": "2021-07-05 13:56:55", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-oxfordOhba01/anat/sub-oxfordOhba01_space-other_T2star_label-SC_seg.json b/derivatives/labels/sub-oxfordOhba01/anat/sub-oxfordOhba01_space-other_T2star_label-SC_seg.json index f893b6d7c0..5e4755fd10 100644 --- a/derivatives/labels/sub-oxfordOhba01/anat/sub-oxfordOhba01_space-other_T2star_label-SC_seg.json +++ b/derivatives/labels/sub-oxfordOhba01/anat/sub-oxfordOhba01_space-other_T2star_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:14" + "Date": "2021-06-08 15:06:14", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-oxfordOhba01/anat/sub-oxfordOhba01_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-oxfordOhba01/anat/sub-oxfordOhba01_space-other_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-oxfordOhba01/anat/sub-oxfordOhba01_space-other_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-oxfordOhba01/anat/sub-oxfordOhba01_space-other_T2w_label-SC_seg.json b/derivatives/labels/sub-oxfordOhba01/anat/sub-oxfordOhba01_space-other_T2w_label-SC_seg.json index f893b6d7c0..88aded3abc 100644 --- a/derivatives/labels/sub-oxfordOhba01/anat/sub-oxfordOhba01_space-other_T2w_label-SC_seg.json +++ b/derivatives/labels/sub-oxfordOhba01/anat/sub-oxfordOhba01_space-other_T2w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:14" + "Date": "2021-06-08 15:06:14", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-oxfordOhba01/dwi/sub-oxfordOhba01_rec-average_dwi_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-oxfordOhba01/dwi/sub-oxfordOhba01_rec-average_dwi_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-oxfordOhba01/dwi/sub-oxfordOhba01_rec-average_dwi_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-oxfordOhba02/anat/sub-oxfordOhba02_flip-1_mt-on_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-oxfordOhba02/anat/sub-oxfordOhba02_flip-1_mt-on_space-other_MTS_label-SC_seg.json index f893b6d7c0..b7edf53e66 100644 --- a/derivatives/labels/sub-oxfordOhba02/anat/sub-oxfordOhba02_flip-1_mt-on_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-oxfordOhba02/anat/sub-oxfordOhba02_flip-1_mt-on_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:14" + "Date": "2021-06-08 15:06:14", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-oxfordOhba02/anat/sub-oxfordOhba02_flip-2_mt-off_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-oxfordOhba02/anat/sub-oxfordOhba02_flip-2_mt-off_space-other_MTS_label-SC_seg.json index 5acfafcb47..bf27c3f9ba 100644 --- a/derivatives/labels/sub-oxfordOhba02/anat/sub-oxfordOhba02_flip-2_mt-off_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-oxfordOhba02/anat/sub-oxfordOhba02_flip-2_mt-off_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "olivier MorinLupien", - "Date": "2021-07-05 14:12:16" + "Date": "2021-07-05 14:12:16", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-oxfordOhba02/anat/sub-oxfordOhba02_space-other_T1w_label-SC_seg.json b/derivatives/labels/sub-oxfordOhba02/anat/sub-oxfordOhba02_space-other_T1w_label-SC_seg.json index c5263f5919..924a93bb71 100644 --- a/derivatives/labels/sub-oxfordOhba02/anat/sub-oxfordOhba02_space-other_T1w_label-SC_seg.json +++ b/derivatives/labels/sub-oxfordOhba02/anat/sub-oxfordOhba02_space-other_T1w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Olivier MorinLupien", - "Date": "2021-07-05 13:59:40" + "Date": "2021-07-05 13:59:40", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-oxfordOhba02/anat/sub-oxfordOhba02_space-other_T2star_label-SC_seg.json b/derivatives/labels/sub-oxfordOhba02/anat/sub-oxfordOhba02_space-other_T2star_label-SC_seg.json index f893b6d7c0..5e4755fd10 100644 --- a/derivatives/labels/sub-oxfordOhba02/anat/sub-oxfordOhba02_space-other_T2star_label-SC_seg.json +++ b/derivatives/labels/sub-oxfordOhba02/anat/sub-oxfordOhba02_space-other_T2star_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:14" + "Date": "2021-06-08 15:06:14", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-oxfordOhba02/anat/sub-oxfordOhba02_space-other_T2w_label-SC_seg.json b/derivatives/labels/sub-oxfordOhba02/anat/sub-oxfordOhba02_space-other_T2w_label-SC_seg.json index fdd9ace462..c12aca3abc 100644 --- a/derivatives/labels/sub-oxfordOhba02/anat/sub-oxfordOhba02_space-other_T2w_label-SC_seg.json +++ b/derivatives/labels/sub-oxfordOhba02/anat/sub-oxfordOhba02_space-other_T2w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "olivier MorinLupien", - "Date": "2021-07-05 14:09:48" + "Date": "2021-07-05 14:09:48", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-oxfordOhba03/anat/sub-oxfordOhba03_flip-1_mt-on_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-oxfordOhba03/anat/sub-oxfordOhba03_flip-1_mt-on_space-other_MTS_label-SC_seg.json index f893b6d7c0..b7edf53e66 100644 --- a/derivatives/labels/sub-oxfordOhba03/anat/sub-oxfordOhba03_flip-1_mt-on_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-oxfordOhba03/anat/sub-oxfordOhba03_flip-1_mt-on_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:14" + "Date": "2021-06-08 15:06:14", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-oxfordOhba03/anat/sub-oxfordOhba03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-oxfordOhba03/anat/sub-oxfordOhba03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-oxfordOhba03/anat/sub-oxfordOhba03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-oxfordOhba03/anat/sub-oxfordOhba03_flip-2_mt-off_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-oxfordOhba03/anat/sub-oxfordOhba03_flip-2_mt-off_space-other_MTS_label-SC_seg.json index 82778cd436..c5ca0a68cc 100644 --- a/derivatives/labels/sub-oxfordOhba03/anat/sub-oxfordOhba03_flip-2_mt-off_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-oxfordOhba03/anat/sub-oxfordOhba03_flip-2_mt-off_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-03 10:35:14" + "Date": "2021-06-03 10:35:14", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-oxfordOhba03/anat/sub-oxfordOhba03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-oxfordOhba03/anat/sub-oxfordOhba03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-oxfordOhba03/anat/sub-oxfordOhba03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-oxfordOhba03/anat/sub-oxfordOhba03_space-other_T1w_label-SC_seg.json b/derivatives/labels/sub-oxfordOhba03/anat/sub-oxfordOhba03_space-other_T1w_label-SC_seg.json index 4aa293ffdf..c0ed73a223 100644 --- a/derivatives/labels/sub-oxfordOhba03/anat/sub-oxfordOhba03_space-other_T1w_label-SC_seg.json +++ b/derivatives/labels/sub-oxfordOhba03/anat/sub-oxfordOhba03_space-other_T1w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Olivier MorinLupien", - "Date": "2021-07-05 14:01:01" + "Date": "2021-07-05 14:01:01", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-oxfordOhba03/anat/sub-oxfordOhba03_space-other_T2star_label-SC_seg.json b/derivatives/labels/sub-oxfordOhba03/anat/sub-oxfordOhba03_space-other_T2star_label-SC_seg.json index f893b6d7c0..5e4755fd10 100644 --- a/derivatives/labels/sub-oxfordOhba03/anat/sub-oxfordOhba03_space-other_T2star_label-SC_seg.json +++ b/derivatives/labels/sub-oxfordOhba03/anat/sub-oxfordOhba03_space-other_T2star_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:14" + "Date": "2021-06-08 15:06:14", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-oxfordOhba03/anat/sub-oxfordOhba03_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-oxfordOhba03/anat/sub-oxfordOhba03_space-other_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-oxfordOhba03/anat/sub-oxfordOhba03_space-other_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-oxfordOhba03/anat/sub-oxfordOhba03_space-other_T2w_label-SC_seg.json b/derivatives/labels/sub-oxfordOhba03/anat/sub-oxfordOhba03_space-other_T2w_label-SC_seg.json index f893b6d7c0..88aded3abc 100644 --- a/derivatives/labels/sub-oxfordOhba03/anat/sub-oxfordOhba03_space-other_T2w_label-SC_seg.json +++ b/derivatives/labels/sub-oxfordOhba03/anat/sub-oxfordOhba03_space-other_T2w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:14" + "Date": "2021-06-08 15:06:14", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-oxfordOhba03/dwi/sub-oxfordOhba03_rec-average_dwi_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-oxfordOhba03/dwi/sub-oxfordOhba03_rec-average_dwi_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-oxfordOhba03/dwi/sub-oxfordOhba03_rec-average_dwi_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-oxfordOhba04/anat/sub-oxfordOhba04_flip-1_mt-on_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-oxfordOhba04/anat/sub-oxfordOhba04_flip-1_mt-on_space-other_MTS_label-SC_seg.json index 716f40e7da..96e9d9ce6f 100644 --- a/derivatives/labels/sub-oxfordOhba04/anat/sub-oxfordOhba04_flip-1_mt-on_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-oxfordOhba04/anat/sub-oxfordOhba04_flip-1_mt-on_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "olivierML", - "Date": "2021-07-05 14:15:07" + "Date": "2021-07-05 14:15:07", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-oxfordOhba04/anat/sub-oxfordOhba04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-oxfordOhba04/anat/sub-oxfordOhba04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-oxfordOhba04/anat/sub-oxfordOhba04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-oxfordOhba04/anat/sub-oxfordOhba04_flip-2_mt-off_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-oxfordOhba04/anat/sub-oxfordOhba04_flip-2_mt-off_space-other_MTS_label-SC_seg.json index f893b6d7c0..b7edf53e66 100644 --- a/derivatives/labels/sub-oxfordOhba04/anat/sub-oxfordOhba04_flip-2_mt-off_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-oxfordOhba04/anat/sub-oxfordOhba04_flip-2_mt-off_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:14" + "Date": "2021-06-08 15:06:14", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-oxfordOhba04/anat/sub-oxfordOhba04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-oxfordOhba04/anat/sub-oxfordOhba04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-oxfordOhba04/anat/sub-oxfordOhba04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-oxfordOhba04/anat/sub-oxfordOhba04_space-other_T1w_label-SC_seg.json b/derivatives/labels/sub-oxfordOhba04/anat/sub-oxfordOhba04_space-other_T1w_label-SC_seg.json index 46b15df1c5..3bdb45c059 100644 --- a/derivatives/labels/sub-oxfordOhba04/anat/sub-oxfordOhba04_space-other_T1w_label-SC_seg.json +++ b/derivatives/labels/sub-oxfordOhba04/anat/sub-oxfordOhba04_space-other_T1w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-07-08 10:26:38" + "Date": "2021-07-08 10:26:38", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-oxfordOhba04/anat/sub-oxfordOhba04_space-other_T2star_label-SC_seg.json b/derivatives/labels/sub-oxfordOhba04/anat/sub-oxfordOhba04_space-other_T2star_label-SC_seg.json index f893b6d7c0..5e4755fd10 100644 --- a/derivatives/labels/sub-oxfordOhba04/anat/sub-oxfordOhba04_space-other_T2star_label-SC_seg.json +++ b/derivatives/labels/sub-oxfordOhba04/anat/sub-oxfordOhba04_space-other_T2star_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:14" + "Date": "2021-06-08 15:06:14", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-oxfordOhba04/anat/sub-oxfordOhba04_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-oxfordOhba04/anat/sub-oxfordOhba04_space-other_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-oxfordOhba04/anat/sub-oxfordOhba04_space-other_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-oxfordOhba04/anat/sub-oxfordOhba04_space-other_T2w_label-SC_seg.json b/derivatives/labels/sub-oxfordOhba04/anat/sub-oxfordOhba04_space-other_T2w_label-SC_seg.json index 45bd1f71d4..4665318346 100644 --- a/derivatives/labels/sub-oxfordOhba04/anat/sub-oxfordOhba04_space-other_T2w_label-SC_seg.json +++ b/derivatives/labels/sub-oxfordOhba04/anat/sub-oxfordOhba04_space-other_T2w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:15" + "Date": "2021-06-08 15:06:15", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-oxfordOhba04/dwi/sub-oxfordOhba04_rec-average_dwi_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-oxfordOhba04/dwi/sub-oxfordOhba04_rec-average_dwi_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-oxfordOhba04/dwi/sub-oxfordOhba04_rec-average_dwi_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-oxfordOhba05/anat/sub-oxfordOhba05_flip-1_mt-on_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-oxfordOhba05/anat/sub-oxfordOhba05_flip-1_mt-on_space-other_MTS_label-SC_seg.json index 45bd1f71d4..4c103338b0 100644 --- a/derivatives/labels/sub-oxfordOhba05/anat/sub-oxfordOhba05_flip-1_mt-on_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-oxfordOhba05/anat/sub-oxfordOhba05_flip-1_mt-on_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:15" + "Date": "2021-06-08 15:06:15", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-oxfordOhba05/anat/sub-oxfordOhba05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-oxfordOhba05/anat/sub-oxfordOhba05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-oxfordOhba05/anat/sub-oxfordOhba05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-oxfordOhba05/anat/sub-oxfordOhba05_flip-2_mt-off_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-oxfordOhba05/anat/sub-oxfordOhba05_flip-2_mt-off_space-other_MTS_label-SC_seg.json index 6e2bd03e2f..4e592aed35 100644 --- a/derivatives/labels/sub-oxfordOhba05/anat/sub-oxfordOhba05_flip-2_mt-off_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-oxfordOhba05/anat/sub-oxfordOhba05_flip-2_mt-off_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-03 10:35:19" + "Date": "2021-06-03 10:35:19", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-oxfordOhba05/anat/sub-oxfordOhba05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-oxfordOhba05/anat/sub-oxfordOhba05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-oxfordOhba05/anat/sub-oxfordOhba05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-oxfordOhba05/anat/sub-oxfordOhba05_space-other_T1w_label-SC_seg.json b/derivatives/labels/sub-oxfordOhba05/anat/sub-oxfordOhba05_space-other_T1w_label-SC_seg.json index c5148ae4f2..8d2f4251d5 100644 --- a/derivatives/labels/sub-oxfordOhba05/anat/sub-oxfordOhba05_space-other_T1w_label-SC_seg.json +++ b/derivatives/labels/sub-oxfordOhba05/anat/sub-oxfordOhba05_space-other_T1w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "olivier MorinLupien", - "Date": "2021-07-05 14:06:01" + "Date": "2021-07-05 14:06:01", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-oxfordOhba05/anat/sub-oxfordOhba05_space-other_T2star_label-SC_seg.json b/derivatives/labels/sub-oxfordOhba05/anat/sub-oxfordOhba05_space-other_T2star_label-SC_seg.json index 45bd1f71d4..57222b1998 100644 --- a/derivatives/labels/sub-oxfordOhba05/anat/sub-oxfordOhba05_space-other_T2star_label-SC_seg.json +++ b/derivatives/labels/sub-oxfordOhba05/anat/sub-oxfordOhba05_space-other_T2star_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:15" + "Date": "2021-06-08 15:06:15", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-oxfordOhba05/anat/sub-oxfordOhba05_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-oxfordOhba05/anat/sub-oxfordOhba05_space-other_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-oxfordOhba05/anat/sub-oxfordOhba05_space-other_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-oxfordOhba05/anat/sub-oxfordOhba05_space-other_T2w_label-SC_seg.json b/derivatives/labels/sub-oxfordOhba05/anat/sub-oxfordOhba05_space-other_T2w_label-SC_seg.json index f9e296a237..b636c5cdff 100644 --- a/derivatives/labels/sub-oxfordOhba05/anat/sub-oxfordOhba05_space-other_T2w_label-SC_seg.json +++ b/derivatives/labels/sub-oxfordOhba05/anat/sub-oxfordOhba05_space-other_T2w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "olivier MorinLupien", - "Date": "2021-07-05 14:13:00" + "Date": "2021-07-05 14:13:00", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-oxfordOhba05/dwi/sub-oxfordOhba05_rec-average_dwi_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-oxfordOhba05/dwi/sub-oxfordOhba05_rec-average_dwi_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-oxfordOhba05/dwi/sub-oxfordOhba05_rec-average_dwi_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-pavia01/anat/sub-pavia01_flip-1_mt-on_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-pavia01/anat/sub-pavia01_flip-1_mt-on_space-other_MTS_label-SC_seg.json index 133f96d833..8d58f70a4d 100644 --- a/derivatives/labels/sub-pavia01/anat/sub-pavia01_flip-1_mt-on_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-pavia01/anat/sub-pavia01_flip-1_mt-on_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-07-08 10:29:37" + "Date": "2021-07-08 10:29:37", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-pavia01/anat/sub-pavia01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-pavia01/anat/sub-pavia01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-pavia01/anat/sub-pavia01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-pavia01/anat/sub-pavia01_flip-2_mt-off_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-pavia01/anat/sub-pavia01_flip-2_mt-off_space-other_MTS_label-SC_seg.json index 45bd1f71d4..4c103338b0 100644 --- a/derivatives/labels/sub-pavia01/anat/sub-pavia01_flip-2_mt-off_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-pavia01/anat/sub-pavia01_flip-2_mt-off_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:15" + "Date": "2021-06-08 15:06:15", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-pavia01/anat/sub-pavia01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-pavia01/anat/sub-pavia01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-pavia01/anat/sub-pavia01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-pavia01/anat/sub-pavia01_space-other_T1w_label-SC_seg.json b/derivatives/labels/sub-pavia01/anat/sub-pavia01_space-other_T1w_label-SC_seg.json index 728f0b9601..08213182dd 100644 --- a/derivatives/labels/sub-pavia01/anat/sub-pavia01_space-other_T1w_label-SC_seg.json +++ b/derivatives/labels/sub-pavia01/anat/sub-pavia01_space-other_T1w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "olivier MorinLupien", - "Date": "2021-07-05 14:06:43" + "Date": "2021-07-05 14:06:43", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-pavia01/anat/sub-pavia01_space-other_T2star_label-SC_seg.json b/derivatives/labels/sub-pavia01/anat/sub-pavia01_space-other_T2star_label-SC_seg.json index 45bd1f71d4..57222b1998 100644 --- a/derivatives/labels/sub-pavia01/anat/sub-pavia01_space-other_T2star_label-SC_seg.json +++ b/derivatives/labels/sub-pavia01/anat/sub-pavia01_space-other_T2star_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:15" + "Date": "2021-06-08 15:06:15", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-pavia01/anat/sub-pavia01_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-pavia01/anat/sub-pavia01_space-other_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-pavia01/anat/sub-pavia01_space-other_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-pavia01/anat/sub-pavia01_space-other_T2w_label-SC_seg.json b/derivatives/labels/sub-pavia01/anat/sub-pavia01_space-other_T2w_label-SC_seg.json index 4c46ac1641..d4fdddb07a 100644 --- a/derivatives/labels/sub-pavia01/anat/sub-pavia01_space-other_T2w_label-SC_seg.json +++ b/derivatives/labels/sub-pavia01/anat/sub-pavia01_space-other_T2w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "olivierML", - "Date": "2021-07-05 14:13:50" + "Date": "2021-07-05 14:13:50", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-pavia01/dwi/sub-pavia01_rec-average_dwi_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-pavia01/dwi/sub-pavia01_rec-average_dwi_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-pavia01/dwi/sub-pavia01_rec-average_dwi_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-pavia02/anat/sub-pavia02_flip-1_mt-on_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-pavia02/anat/sub-pavia02_flip-1_mt-on_space-other_MTS_label-SC_seg.json index 45bd1f71d4..4c103338b0 100644 --- a/derivatives/labels/sub-pavia02/anat/sub-pavia02_flip-1_mt-on_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-pavia02/anat/sub-pavia02_flip-1_mt-on_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:15" + "Date": "2021-06-08 15:06:15", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-pavia02/anat/sub-pavia02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-pavia02/anat/sub-pavia02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-pavia02/anat/sub-pavia02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-pavia02/anat/sub-pavia02_flip-2_mt-off_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-pavia02/anat/sub-pavia02_flip-2_mt-off_space-other_MTS_label-SC_seg.json index 6e2bd03e2f..4e592aed35 100644 --- a/derivatives/labels/sub-pavia02/anat/sub-pavia02_flip-2_mt-off_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-pavia02/anat/sub-pavia02_flip-2_mt-off_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-03 10:35:19" + "Date": "2021-06-03 10:35:19", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-pavia02/anat/sub-pavia02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-pavia02/anat/sub-pavia02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-pavia02/anat/sub-pavia02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-pavia02/anat/sub-pavia02_space-other_T1w_label-SC_seg.json b/derivatives/labels/sub-pavia02/anat/sub-pavia02_space-other_T1w_label-SC_seg.json index 67a7ae2a42..59bc6a39e6 100644 --- a/derivatives/labels/sub-pavia02/anat/sub-pavia02_space-other_T1w_label-SC_seg.json +++ b/derivatives/labels/sub-pavia02/anat/sub-pavia02_space-other_T1w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "olivierML", - "Date": "2021-07-05 14:14:50" + "Date": "2021-07-05 14:14:50", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-pavia02/anat/sub-pavia02_space-other_T2star_label-SC_seg.json b/derivatives/labels/sub-pavia02/anat/sub-pavia02_space-other_T2star_label-SC_seg.json index 45bd1f71d4..57222b1998 100644 --- a/derivatives/labels/sub-pavia02/anat/sub-pavia02_space-other_T2star_label-SC_seg.json +++ b/derivatives/labels/sub-pavia02/anat/sub-pavia02_space-other_T2star_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:15" + "Date": "2021-06-08 15:06:15", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-pavia02/anat/sub-pavia02_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-pavia02/anat/sub-pavia02_space-other_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-pavia02/anat/sub-pavia02_space-other_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-pavia02/anat/sub-pavia02_space-other_T2w_label-SC_seg.json b/derivatives/labels/sub-pavia02/anat/sub-pavia02_space-other_T2w_label-SC_seg.json index 3a724307f6..94890be6e8 100644 --- a/derivatives/labels/sub-pavia02/anat/sub-pavia02_space-other_T2w_label-SC_seg.json +++ b/derivatives/labels/sub-pavia02/anat/sub-pavia02_space-other_T2w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Yassine El Bouchaibi", - "Date": "2021-06-30 22:02:30" + "Date": "2021-06-30 22:02:30", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-pavia02/dwi/sub-pavia02_rec-average_dwi_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-pavia02/dwi/sub-pavia02_rec-average_dwi_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-pavia02/dwi/sub-pavia02_rec-average_dwi_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-pavia03/anat/sub-pavia03_flip-1_mt-on_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-pavia03/anat/sub-pavia03_flip-1_mt-on_space-other_MTS_label-SC_seg.json index 45bd1f71d4..4c103338b0 100644 --- a/derivatives/labels/sub-pavia03/anat/sub-pavia03_flip-1_mt-on_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-pavia03/anat/sub-pavia03_flip-1_mt-on_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:15" + "Date": "2021-06-08 15:06:15", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-pavia03/anat/sub-pavia03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-pavia03/anat/sub-pavia03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-pavia03/anat/sub-pavia03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-pavia03/anat/sub-pavia03_flip-2_mt-off_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-pavia03/anat/sub-pavia03_flip-2_mt-off_space-other_MTS_label-SC_seg.json index 6e2bd03e2f..4e592aed35 100644 --- a/derivatives/labels/sub-pavia03/anat/sub-pavia03_flip-2_mt-off_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-pavia03/anat/sub-pavia03_flip-2_mt-off_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-03 10:35:19" + "Date": "2021-06-03 10:35:19", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-pavia03/anat/sub-pavia03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-pavia03/anat/sub-pavia03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-pavia03/anat/sub-pavia03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-pavia03/anat/sub-pavia03_space-other_T1w_label-SC_seg.json b/derivatives/labels/sub-pavia03/anat/sub-pavia03_space-other_T1w_label-SC_seg.json index 05eaa39ac2..337e4dd65e 100644 --- a/derivatives/labels/sub-pavia03/anat/sub-pavia03_space-other_T1w_label-SC_seg.json +++ b/derivatives/labels/sub-pavia03/anat/sub-pavia03_space-other_T1w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Yassine El Bouchaibi", - "Date": "2021-07-08 23:17:59" + "Date": "2021-07-08 23:17:59", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-pavia03/anat/sub-pavia03_space-other_T2star_label-SC_seg.json b/derivatives/labels/sub-pavia03/anat/sub-pavia03_space-other_T2star_label-SC_seg.json index 45bd1f71d4..57222b1998 100644 --- a/derivatives/labels/sub-pavia03/anat/sub-pavia03_space-other_T2star_label-SC_seg.json +++ b/derivatives/labels/sub-pavia03/anat/sub-pavia03_space-other_T2star_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:15" + "Date": "2021-06-08 15:06:15", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-pavia03/anat/sub-pavia03_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-pavia03/anat/sub-pavia03_space-other_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-pavia03/anat/sub-pavia03_space-other_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-pavia03/anat/sub-pavia03_space-other_T2w_label-SC_seg.json b/derivatives/labels/sub-pavia03/anat/sub-pavia03_space-other_T2w_label-SC_seg.json index 9e7c15b3c4..707d5be134 100644 --- a/derivatives/labels/sub-pavia03/anat/sub-pavia03_space-other_T2w_label-SC_seg.json +++ b/derivatives/labels/sub-pavia03/anat/sub-pavia03_space-other_T2w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Yassine El Bouchaibi", - "Date": "2021-06-30 21:39:49" + "Date": "2021-06-30 21:39:49", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-pavia03/dwi/sub-pavia03_rec-average_dwi_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-pavia03/dwi/sub-pavia03_rec-average_dwi_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-pavia03/dwi/sub-pavia03_rec-average_dwi_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-pavia04/anat/sub-pavia04_flip-1_mt-on_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-pavia04/anat/sub-pavia04_flip-1_mt-on_space-other_MTS_label-SC_seg.json index 45bd1f71d4..4c103338b0 100644 --- a/derivatives/labels/sub-pavia04/anat/sub-pavia04_flip-1_mt-on_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-pavia04/anat/sub-pavia04_flip-1_mt-on_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:15" + "Date": "2021-06-08 15:06:15", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-pavia04/anat/sub-pavia04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-pavia04/anat/sub-pavia04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-pavia04/anat/sub-pavia04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-pavia04/anat/sub-pavia04_flip-2_mt-off_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-pavia04/anat/sub-pavia04_flip-2_mt-off_space-other_MTS_label-SC_seg.json index eae31bc0fc..4fd690cdf1 100644 --- a/derivatives/labels/sub-pavia04/anat/sub-pavia04_flip-2_mt-off_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-pavia04/anat/sub-pavia04_flip-2_mt-off_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-03 10:35:11" + "Date": "2021-06-03 10:35:11", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-pavia04/anat/sub-pavia04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-pavia04/anat/sub-pavia04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-pavia04/anat/sub-pavia04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-pavia04/anat/sub-pavia04_space-other_T1w_label-SC_seg.json b/derivatives/labels/sub-pavia04/anat/sub-pavia04_space-other_T1w_label-SC_seg.json index b2fc69c3bf..f7b6ef5ec9 100644 --- a/derivatives/labels/sub-pavia04/anat/sub-pavia04_space-other_T1w_label-SC_seg.json +++ b/derivatives/labels/sub-pavia04/anat/sub-pavia04_space-other_T1w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-06 10:16:35" + "Date": "2022-10-06 10:16:35", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-pavia04/anat/sub-pavia04_space-other_T2star_label-SC_seg.json b/derivatives/labels/sub-pavia04/anat/sub-pavia04_space-other_T2star_label-SC_seg.json index 0c765d1b05..009c274f71 100644 --- a/derivatives/labels/sub-pavia04/anat/sub-pavia04_space-other_T2star_label-SC_seg.json +++ b/derivatives/labels/sub-pavia04/anat/sub-pavia04_space-other_T2star_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Yassine El Bouchaibi", - "Date": "2021-06-30 23:03:03" + "Date": "2021-06-30 23:03:03", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-pavia04/anat/sub-pavia04_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-pavia04/anat/sub-pavia04_space-other_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-pavia04/anat/sub-pavia04_space-other_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-pavia04/anat/sub-pavia04_space-other_T2w_csflabel-SC_seg.json b/derivatives/labels/sub-pavia04/anat/sub-pavia04_space-other_T2w_csflabel-SC_seg.json index 5d72cb8aaa..2edede9801 100644 --- a/derivatives/labels/sub-pavia04/anat/sub-pavia04_space-other_T2w_csflabel-SC_seg.json +++ b/derivatives/labels/sub-pavia04/anat/sub-pavia04_space-other_T2w_csflabel-SC_seg.json @@ -1,3 +1,7 @@ { - "author": "Charley Gros" -} + "author": "Charley Gros", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/labels/sub-pavia04/anat/sub-pavia04_space-other_T2w_label-SC_seg.json b/derivatives/labels/sub-pavia04/anat/sub-pavia04_space-other_T2w_label-SC_seg.json index 45bd1f71d4..4665318346 100644 --- a/derivatives/labels/sub-pavia04/anat/sub-pavia04_space-other_T2w_label-SC_seg.json +++ b/derivatives/labels/sub-pavia04/anat/sub-pavia04_space-other_T2w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:15" + "Date": "2021-06-08 15:06:15", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-pavia04/dwi/sub-pavia04_rec-average_dwi_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-pavia04/dwi/sub-pavia04_rec-average_dwi_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-pavia04/dwi/sub-pavia04_rec-average_dwi_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-pavia05/anat/sub-pavia05_flip-1_mt-on_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-pavia05/anat/sub-pavia05_flip-1_mt-on_space-other_MTS_label-SC_seg.json index 45bd1f71d4..4c103338b0 100644 --- a/derivatives/labels/sub-pavia05/anat/sub-pavia05_flip-1_mt-on_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-pavia05/anat/sub-pavia05_flip-1_mt-on_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:15" + "Date": "2021-06-08 15:06:15", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-pavia05/anat/sub-pavia05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-pavia05/anat/sub-pavia05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-pavia05/anat/sub-pavia05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-pavia05/anat/sub-pavia05_flip-2_mt-off_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-pavia05/anat/sub-pavia05_flip-2_mt-off_space-other_MTS_label-SC_seg.json index 01859567c7..37dac7f8f1 100644 --- a/derivatives/labels/sub-pavia05/anat/sub-pavia05_flip-2_mt-off_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-pavia05/anat/sub-pavia05_flip-2_mt-off_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-03 10:34:52" + "Date": "2021-06-03 10:34:52", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-pavia05/anat/sub-pavia05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-pavia05/anat/sub-pavia05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-pavia05/anat/sub-pavia05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-pavia05/anat/sub-pavia05_space-other_T1w_label-SC_seg.json b/derivatives/labels/sub-pavia05/anat/sub-pavia05_space-other_T1w_label-SC_seg.json index 421e8489af..18f365b74c 100644 --- a/derivatives/labels/sub-pavia05/anat/sub-pavia05_space-other_T1w_label-SC_seg.json +++ b/derivatives/labels/sub-pavia05/anat/sub-pavia05_space-other_T1w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "olivierML", - "Date": "2021-07-05 14:18:03" + "Date": "2021-07-05 14:18:03", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-pavia05/anat/sub-pavia05_space-other_T2star_label-SC_seg.json b/derivatives/labels/sub-pavia05/anat/sub-pavia05_space-other_T2star_label-SC_seg.json index 45bd1f71d4..57222b1998 100644 --- a/derivatives/labels/sub-pavia05/anat/sub-pavia05_space-other_T2star_label-SC_seg.json +++ b/derivatives/labels/sub-pavia05/anat/sub-pavia05_space-other_T2star_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:15" + "Date": "2021-06-08 15:06:15", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-pavia05/anat/sub-pavia05_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-pavia05/anat/sub-pavia05_space-other_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-pavia05/anat/sub-pavia05_space-other_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-pavia05/anat/sub-pavia05_space-other_T2w_label-SC_seg.json b/derivatives/labels/sub-pavia05/anat/sub-pavia05_space-other_T2w_label-SC_seg.json index 4853c064a1..b35fb6c76e 100644 --- a/derivatives/labels/sub-pavia05/anat/sub-pavia05_space-other_T2w_label-SC_seg.json +++ b/derivatives/labels/sub-pavia05/anat/sub-pavia05_space-other_T2w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Yassine El Bouchaibi", - "Date": "2021-06-30 22:08:28" + "Date": "2021-06-30 22:08:28", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-pavia05/dwi/sub-pavia05_rec-average_dwi_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-pavia05/dwi/sub-pavia05_rec-average_dwi_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-pavia05/dwi/sub-pavia05_rec-average_dwi_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-pavia06/anat/sub-pavia06_flip-1_mt-on_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-pavia06/anat/sub-pavia06_flip-1_mt-on_space-other_MTS_label-SC_seg.json index cb0b980eb2..48aff1681c 100644 --- a/derivatives/labels/sub-pavia06/anat/sub-pavia06_flip-1_mt-on_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-pavia06/anat/sub-pavia06_flip-1_mt-on_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Yassine El Bouchaibi", - "Date": "2021-06-30 22:51:06" + "Date": "2021-06-30 22:51:06", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-pavia06/anat/sub-pavia06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-pavia06/anat/sub-pavia06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-pavia06/anat/sub-pavia06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-pavia06/anat/sub-pavia06_flip-2_mt-off_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-pavia06/anat/sub-pavia06_flip-2_mt-off_space-other_MTS_label-SC_seg.json index ce4236f5c8..2d60b9eb16 100644 --- a/derivatives/labels/sub-pavia06/anat/sub-pavia06_flip-2_mt-off_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-pavia06/anat/sub-pavia06_flip-2_mt-off_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Yassine El Bouchaibi", - "Date": "2021-06-30 22:31:47" + "Date": "2021-06-30 22:31:47", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-pavia06/anat/sub-pavia06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-pavia06/anat/sub-pavia06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-pavia06/anat/sub-pavia06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-pavia06/anat/sub-pavia06_space-other_T1w_label-SC_seg.json b/derivatives/labels/sub-pavia06/anat/sub-pavia06_space-other_T1w_label-SC_seg.json index 617d7d5e25..29956da670 100644 --- a/derivatives/labels/sub-pavia06/anat/sub-pavia06_space-other_T1w_label-SC_seg.json +++ b/derivatives/labels/sub-pavia06/anat/sub-pavia06_space-other_T1w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "olivierML", - "Date": "2021-07-05 14:16:49" + "Date": "2021-07-05 14:16:49", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-pavia06/anat/sub-pavia06_space-other_T2star_label-SC_seg.json b/derivatives/labels/sub-pavia06/anat/sub-pavia06_space-other_T2star_label-SC_seg.json index 45bd1f71d4..57222b1998 100644 --- a/derivatives/labels/sub-pavia06/anat/sub-pavia06_space-other_T2star_label-SC_seg.json +++ b/derivatives/labels/sub-pavia06/anat/sub-pavia06_space-other_T2star_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:15" + "Date": "2021-06-08 15:06:15", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-pavia06/anat/sub-pavia06_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-pavia06/anat/sub-pavia06_space-other_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-pavia06/anat/sub-pavia06_space-other_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-pavia06/anat/sub-pavia06_space-other_T2w_label-SC_seg.json b/derivatives/labels/sub-pavia06/anat/sub-pavia06_space-other_T2w_label-SC_seg.json index d516c4d776..b8aa4082eb 100644 --- a/derivatives/labels/sub-pavia06/anat/sub-pavia06_space-other_T2w_label-SC_seg.json +++ b/derivatives/labels/sub-pavia06/anat/sub-pavia06_space-other_T2w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-07-07 16:03:22" + "Date": "2021-07-07 16:03:22", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-pavia06/dwi/sub-pavia06_rec-average_dwi_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-pavia06/dwi/sub-pavia06_rec-average_dwi_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-pavia06/dwi/sub-pavia06_rec-average_dwi_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-perform01/anat/sub-perform01_flip-1_mt-on_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-perform01/anat/sub-perform01_flip-1_mt-on_space-other_MTS_label-SC_seg.json index 5f5edd21c1..86f2518435 100644 --- a/derivatives/labels/sub-perform01/anat/sub-perform01_flip-1_mt-on_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-perform01/anat/sub-perform01_flip-1_mt-on_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Yassine El Bouchaibi", - "Date": "2021-06-30 23:12:10" + "Date": "2021-06-30 23:12:10", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-perform01/anat/sub-perform01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-perform01/anat/sub-perform01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-perform01/anat/sub-perform01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-perform01/anat/sub-perform01_flip-2_mt-off_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-perform01/anat/sub-perform01_flip-2_mt-off_space-other_MTS_label-SC_seg.json index 3fbcf2f1cf..6280b70f43 100644 --- a/derivatives/labels/sub-perform01/anat/sub-perform01_flip-2_mt-off_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-perform01/anat/sub-perform01_flip-2_mt-off_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Yassine El Bouchaibi", - "Date": "2021-06-30 22:57:55" + "Date": "2021-06-30 22:57:55", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-perform01/anat/sub-perform01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-perform01/anat/sub-perform01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-perform01/anat/sub-perform01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-perform01/anat/sub-perform01_space-other_T1w_label-SC_seg.json b/derivatives/labels/sub-perform01/anat/sub-perform01_space-other_T1w_label-SC_seg.json index e254752952..2d41601774 100644 --- a/derivatives/labels/sub-perform01/anat/sub-perform01_space-other_T1w_label-SC_seg.json +++ b/derivatives/labels/sub-perform01/anat/sub-perform01_space-other_T1w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Yassine El Bouchaibi", - "Date": "2021-06-30 02:22:33" + "Date": "2021-06-30 02:22:33", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-perform01/anat/sub-perform01_space-other_T2star_label-SC_seg.json b/derivatives/labels/sub-perform01/anat/sub-perform01_space-other_T2star_label-SC_seg.json index 45bd1f71d4..57222b1998 100644 --- a/derivatives/labels/sub-perform01/anat/sub-perform01_space-other_T2star_label-SC_seg.json +++ b/derivatives/labels/sub-perform01/anat/sub-perform01_space-other_T2star_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:15" + "Date": "2021-06-08 15:06:15", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-perform01/anat/sub-perform01_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-perform01/anat/sub-perform01_space-other_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-perform01/anat/sub-perform01_space-other_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-perform01/anat/sub-perform01_space-other_T2w_label-SC_seg.json b/derivatives/labels/sub-perform01/anat/sub-perform01_space-other_T2w_label-SC_seg.json index a2e0aa7a5f..c9265f933f 100644 --- a/derivatives/labels/sub-perform01/anat/sub-perform01_space-other_T2w_label-SC_seg.json +++ b/derivatives/labels/sub-perform01/anat/sub-perform01_space-other_T2w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Yassine El Bouchaibi", - "Date": "2021-06-30 22:46:41" + "Date": "2021-06-30 22:46:41", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-perform01/dwi/sub-perform01_rec-average_dwi_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-perform01/dwi/sub-perform01_rec-average_dwi_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-perform01/dwi/sub-perform01_rec-average_dwi_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-perform02/anat/sub-perform02_flip-1_mt-on_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-perform02/anat/sub-perform02_flip-1_mt-on_space-other_MTS_label-SC_seg.json index bc6fca8ba9..6acadce268 100644 --- a/derivatives/labels/sub-perform02/anat/sub-perform02_flip-1_mt-on_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-perform02/anat/sub-perform02_flip-1_mt-on_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Yassine El Bouchaibi", - "Date": "2021-06-30 23:07:25" + "Date": "2021-06-30 23:07:25", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-perform02/anat/sub-perform02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-perform02/anat/sub-perform02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-perform02/anat/sub-perform02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-perform02/anat/sub-perform02_flip-2_mt-off_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-perform02/anat/sub-perform02_flip-2_mt-off_space-other_MTS_label-SC_seg.json index 6a55ab256c..4b5015bd42 100644 --- a/derivatives/labels/sub-perform02/anat/sub-perform02_flip-2_mt-off_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-perform02/anat/sub-perform02_flip-2_mt-off_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-06 10:23:10" + "Date": "2022-10-06 10:23:10", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-perform02/anat/sub-perform02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-perform02/anat/sub-perform02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-perform02/anat/sub-perform02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-perform02/anat/sub-perform02_space-other_T1w_label-SC_seg.json b/derivatives/labels/sub-perform02/anat/sub-perform02_space-other_T1w_label-SC_seg.json index f04cc02f12..3ad60b20d5 100644 --- a/derivatives/labels/sub-perform02/anat/sub-perform02_space-other_T1w_label-SC_seg.json +++ b/derivatives/labels/sub-perform02/anat/sub-perform02_space-other_T1w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-08-02 12:37:42" -} + "Date": "2022-08-02 12:37:42", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/labels/sub-perform02/anat/sub-perform02_space-other_T2star_label-SC_seg.json b/derivatives/labels/sub-perform02/anat/sub-perform02_space-other_T2star_label-SC_seg.json index d292ca4377..d0b3da26a5 100644 --- a/derivatives/labels/sub-perform02/anat/sub-perform02_space-other_T2star_label-SC_seg.json +++ b/derivatives/labels/sub-perform02/anat/sub-perform02_space-other_T2star_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Yassine El Bouchaibi", - "Date": "2021-07-01 00:28:16" + "Date": "2021-07-01 00:28:16", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-perform02/anat/sub-perform02_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-perform02/anat/sub-perform02_space-other_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-perform02/anat/sub-perform02_space-other_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-perform02/anat/sub-perform02_space-other_T2w_csflabel-SC_seg.json b/derivatives/labels/sub-perform02/anat/sub-perform02_space-other_T2w_csflabel-SC_seg.json index 5d72cb8aaa..2edede9801 100644 --- a/derivatives/labels/sub-perform02/anat/sub-perform02_space-other_T2w_csflabel-SC_seg.json +++ b/derivatives/labels/sub-perform02/anat/sub-perform02_space-other_T2w_csflabel-SC_seg.json @@ -1,3 +1,7 @@ { - "author": "Charley Gros" -} + "author": "Charley Gros", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/labels/sub-perform02/anat/sub-perform02_space-other_T2w_label-SC_seg.json b/derivatives/labels/sub-perform02/anat/sub-perform02_space-other_T2w_label-SC_seg.json index fb3c07a726..9e3c257d9e 100644 --- a/derivatives/labels/sub-perform02/anat/sub-perform02_space-other_T2w_label-SC_seg.json +++ b/derivatives/labels/sub-perform02/anat/sub-perform02_space-other_T2w_label-SC_seg.json @@ -1,4 +1,8 @@ { - "Author":"Sandrine Bedard", - "Date": "2022-08-04 15:24:09" -} + "Author": "Sandrine Bedard", + "Date": "2022-08-04 15:24:09", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/labels/sub-perform02/dwi/sub-perform02_rec-average_dwi_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-perform02/dwi/sub-perform02_rec-average_dwi_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-perform02/dwi/sub-perform02_rec-average_dwi_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-perform03/anat/sub-perform03_flip-1_mt-on_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-perform03/anat/sub-perform03_flip-1_mt-on_space-other_MTS_label-SC_seg.json index ba76069b29..3acbb4e7ec 100644 --- a/derivatives/labels/sub-perform03/anat/sub-perform03_flip-1_mt-on_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-perform03/anat/sub-perform03_flip-1_mt-on_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Yassine El Bouchaibi", - "Date": "2021-07-01 00:27:29" + "Date": "2021-07-01 00:27:29", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-perform03/anat/sub-perform03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-perform03/anat/sub-perform03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-perform03/anat/sub-perform03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-perform03/anat/sub-perform03_flip-2_mt-off_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-perform03/anat/sub-perform03_flip-2_mt-off_space-other_MTS_label-SC_seg.json index 1e35853841..5cce60659e 100644 --- a/derivatives/labels/sub-perform03/anat/sub-perform03_flip-2_mt-off_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-perform03/anat/sub-perform03_flip-2_mt-off_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Yassine El Bouchaibi", - "Date": "2021-06-30 23:01:58" + "Date": "2021-06-30 23:01:58", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-perform03/anat/sub-perform03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-perform03/anat/sub-perform03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-perform03/anat/sub-perform03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-perform03/anat/sub-perform03_space-other_T1w_label-SC_seg.json b/derivatives/labels/sub-perform03/anat/sub-perform03_space-other_T1w_label-SC_seg.json index 60bc3eaa9f..7527191ff4 100644 --- a/derivatives/labels/sub-perform03/anat/sub-perform03_space-other_T1w_label-SC_seg.json +++ b/derivatives/labels/sub-perform03/anat/sub-perform03_space-other_T1w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Yassine El Bouchaibi", - "Date": "2021-06-30 02:59:09" + "Date": "2021-06-30 02:59:09", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-perform03/anat/sub-perform03_space-other_T2star_label-SC_seg.json b/derivatives/labels/sub-perform03/anat/sub-perform03_space-other_T2star_label-SC_seg.json index 811cc712a8..abeb53b937 100644 --- a/derivatives/labels/sub-perform03/anat/sub-perform03_space-other_T2star_label-SC_seg.json +++ b/derivatives/labels/sub-perform03/anat/sub-perform03_space-other_T2star_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Yassine El Bouchaibi", - "Date": "2021-07-01 00:29:27" + "Date": "2021-07-01 00:29:27", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-perform03/anat/sub-perform03_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-perform03/anat/sub-perform03_space-other_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-perform03/anat/sub-perform03_space-other_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-perform03/anat/sub-perform03_space-other_T2w_label-SC_seg.json b/derivatives/labels/sub-perform03/anat/sub-perform03_space-other_T2w_label-SC_seg.json index 5552c60ecb..8e863c0df2 100644 --- a/derivatives/labels/sub-perform03/anat/sub-perform03_space-other_T2w_label-SC_seg.json +++ b/derivatives/labels/sub-perform03/anat/sub-perform03_space-other_T2w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-08-03 15:49:07" + "Date": "2021-08-03 15:49:07", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-perform03/dwi/sub-perform03_rec-average_dwi_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-perform03/dwi/sub-perform03_rec-average_dwi_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-perform03/dwi/sub-perform03_rec-average_dwi_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-perform04/anat/sub-perform04_flip-1_mt-on_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-perform04/anat/sub-perform04_flip-1_mt-on_space-other_MTS_label-SC_seg.json index 45bd1f71d4..4c103338b0 100644 --- a/derivatives/labels/sub-perform04/anat/sub-perform04_flip-1_mt-on_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-perform04/anat/sub-perform04_flip-1_mt-on_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:15" + "Date": "2021-06-08 15:06:15", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-perform04/anat/sub-perform04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-perform04/anat/sub-perform04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-perform04/anat/sub-perform04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-perform04/anat/sub-perform04_flip-2_mt-off_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-perform04/anat/sub-perform04_flip-2_mt-off_space-other_MTS_label-SC_seg.json index 552b87d198..e99c6bd3a6 100644 --- a/derivatives/labels/sub-perform04/anat/sub-perform04_flip-2_mt-off_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-perform04/anat/sub-perform04_flip-2_mt-off_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-03 10:35:15" + "Date": "2021-06-03 10:35:15", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-perform04/anat/sub-perform04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-perform04/anat/sub-perform04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-perform04/anat/sub-perform04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-perform04/anat/sub-perform04_space-other_T1w_label-SC_seg.json b/derivatives/labels/sub-perform04/anat/sub-perform04_space-other_T1w_label-SC_seg.json index 68116585a6..4a6cca0a8e 100644 --- a/derivatives/labels/sub-perform04/anat/sub-perform04_space-other_T1w_label-SC_seg.json +++ b/derivatives/labels/sub-perform04/anat/sub-perform04_space-other_T1w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Yassine El Bouchaibi", - "Date": "2021-06-29 22:18:49" + "Date": "2021-06-29 22:18:49", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-perform04/anat/sub-perform04_space-other_T2star_label-SC_seg.json b/derivatives/labels/sub-perform04/anat/sub-perform04_space-other_T2star_label-SC_seg.json index 45bd1f71d4..57222b1998 100644 --- a/derivatives/labels/sub-perform04/anat/sub-perform04_space-other_T2star_label-SC_seg.json +++ b/derivatives/labels/sub-perform04/anat/sub-perform04_space-other_T2star_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:15" + "Date": "2021-06-08 15:06:15", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-perform04/anat/sub-perform04_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-perform04/anat/sub-perform04_space-other_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-perform04/anat/sub-perform04_space-other_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-perform04/anat/sub-perform04_space-other_T2w_label-SC_seg.json b/derivatives/labels/sub-perform04/anat/sub-perform04_space-other_T2w_label-SC_seg.json index db8f09872c..7f0289fd6d 100644 --- a/derivatives/labels/sub-perform04/anat/sub-perform04_space-other_T2w_label-SC_seg.json +++ b/derivatives/labels/sub-perform04/anat/sub-perform04_space-other_T2w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-07-07 16:03:53" + "Date": "2021-07-07 16:03:53", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-perform04/dwi/sub-perform04_rec-average_dwi_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-perform04/dwi/sub-perform04_rec-average_dwi_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-perform04/dwi/sub-perform04_rec-average_dwi_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-perform05/anat/sub-perform05_flip-1_mt-on_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-perform05/anat/sub-perform05_flip-1_mt-on_space-other_MTS_label-SC_seg.json index 4bef29594d..fee0c18a36 100644 --- a/derivatives/labels/sub-perform05/anat/sub-perform05_flip-1_mt-on_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-perform05/anat/sub-perform05_flip-1_mt-on_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:16" + "Date": "2021-06-08 15:06:16", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-perform05/anat/sub-perform05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-perform05/anat/sub-perform05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-perform05/anat/sub-perform05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-perform05/anat/sub-perform05_flip-2_mt-off_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-perform05/anat/sub-perform05_flip-2_mt-off_space-other_MTS_label-SC_seg.json index 4bef29594d..fee0c18a36 100644 --- a/derivatives/labels/sub-perform05/anat/sub-perform05_flip-2_mt-off_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-perform05/anat/sub-perform05_flip-2_mt-off_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:16" + "Date": "2021-06-08 15:06:16", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-perform05/anat/sub-perform05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-perform05/anat/sub-perform05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-perform05/anat/sub-perform05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-perform05/anat/sub-perform05_space-other_T1w_label-SC_seg.json b/derivatives/labels/sub-perform05/anat/sub-perform05_space-other_T1w_label-SC_seg.json index dc2b00b781..a375f13275 100644 --- a/derivatives/labels/sub-perform05/anat/sub-perform05_space-other_T1w_label-SC_seg.json +++ b/derivatives/labels/sub-perform05/anat/sub-perform05_space-other_T1w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Yassine El Bouchaibi", - "Date": "2021-06-30 02:28:37" + "Date": "2021-06-30 02:28:37", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-perform05/anat/sub-perform05_space-other_T2star_label-SC_seg.json b/derivatives/labels/sub-perform05/anat/sub-perform05_space-other_T2star_label-SC_seg.json index 4bef29594d..6b0ae7c890 100644 --- a/derivatives/labels/sub-perform05/anat/sub-perform05_space-other_T2star_label-SC_seg.json +++ b/derivatives/labels/sub-perform05/anat/sub-perform05_space-other_T2star_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:16" + "Date": "2021-06-08 15:06:16", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-perform05/anat/sub-perform05_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-perform05/anat/sub-perform05_space-other_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-perform05/anat/sub-perform05_space-other_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-perform05/anat/sub-perform05_space-other_T2w_label-SC_seg.json b/derivatives/labels/sub-perform05/anat/sub-perform05_space-other_T2w_label-SC_seg.json index 4bef29594d..1d879c8793 100644 --- a/derivatives/labels/sub-perform05/anat/sub-perform05_space-other_T2w_label-SC_seg.json +++ b/derivatives/labels/sub-perform05/anat/sub-perform05_space-other_T2w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:16" + "Date": "2021-06-08 15:06:16", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-perform05/dwi/sub-perform05_rec-average_dwi_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-perform05/dwi/sub-perform05_rec-average_dwi_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-perform05/dwi/sub-perform05_rec-average_dwi_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-perform06/anat/sub-perform06_flip-1_mt-on_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-perform06/anat/sub-perform06_flip-1_mt-on_space-other_MTS_label-SC_seg.json index c392c3ee6f..231e102c94 100644 --- a/derivatives/labels/sub-perform06/anat/sub-perform06_flip-1_mt-on_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-perform06/anat/sub-perform06_flip-1_mt-on_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Yassine El Bouchaibi", - "Date": "2021-06-30 23:08:57" + "Date": "2021-06-30 23:08:57", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-perform06/anat/sub-perform06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-perform06/anat/sub-perform06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-perform06/anat/sub-perform06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-perform06/anat/sub-perform06_flip-2_mt-off_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-perform06/anat/sub-perform06_flip-2_mt-off_space-other_MTS_label-SC_seg.json index a0ef8384ae..bc5ea055e6 100644 --- a/derivatives/labels/sub-perform06/anat/sub-perform06_flip-2_mt-off_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-perform06/anat/sub-perform06_flip-2_mt-off_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Yassine El Bouchaibi", - "Date": "2021-06-30 22:54:25" + "Date": "2021-06-30 22:54:25", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-perform06/anat/sub-perform06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-perform06/anat/sub-perform06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-perform06/anat/sub-perform06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-perform06/anat/sub-perform06_space-other_T1w_label-SC_seg.json b/derivatives/labels/sub-perform06/anat/sub-perform06_space-other_T1w_label-SC_seg.json index a9db017688..353262bdc6 100644 --- a/derivatives/labels/sub-perform06/anat/sub-perform06_space-other_T1w_label-SC_seg.json +++ b/derivatives/labels/sub-perform06/anat/sub-perform06_space-other_T1w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-06 10:34:10" + "Date": "2022-10-06 10:34:10", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-perform06/anat/sub-perform06_space-other_T2star_label-SC_seg.json b/derivatives/labels/sub-perform06/anat/sub-perform06_space-other_T2star_label-SC_seg.json index 4bef29594d..6b0ae7c890 100644 --- a/derivatives/labels/sub-perform06/anat/sub-perform06_space-other_T2star_label-SC_seg.json +++ b/derivatives/labels/sub-perform06/anat/sub-perform06_space-other_T2star_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:16" + "Date": "2021-06-08 15:06:16", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-perform06/anat/sub-perform06_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-perform06/anat/sub-perform06_space-other_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-perform06/anat/sub-perform06_space-other_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-perform06/anat/sub-perform06_space-other_T2w_label-SC_seg.json b/derivatives/labels/sub-perform06/anat/sub-perform06_space-other_T2w_label-SC_seg.json index cfa9954563..8bba43be29 100644 --- a/derivatives/labels/sub-perform06/anat/sub-perform06_space-other_T2w_label-SC_seg.json +++ b/derivatives/labels/sub-perform06/anat/sub-perform06_space-other_T2w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-07-07 16:05:12" + "Date": "2021-07-07 16:05:12", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-perform06/dwi/sub-perform06_rec-average_dwi_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-perform06/dwi/sub-perform06_rec-average_dwi_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-perform06/dwi/sub-perform06_rec-average_dwi_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-queensland01/anat/sub-queensland01_flip-1_mt-on_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-queensland01/anat/sub-queensland01_flip-1_mt-on_space-other_MTS_label-SC_seg.json index d324eaf46c..35ebab15bc 100644 --- a/derivatives/labels/sub-queensland01/anat/sub-queensland01_flip-1_mt-on_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-queensland01/anat/sub-queensland01_flip-1_mt-on_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Yassine El Bouchaibi", - "Date": "2021-06-30 23:00:24" + "Date": "2021-06-30 23:00:24", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-queensland01/anat/sub-queensland01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-queensland01/anat/sub-queensland01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-queensland01/anat/sub-queensland01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-queensland01/anat/sub-queensland01_flip-2_mt-off_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-queensland01/anat/sub-queensland01_flip-2_mt-off_space-other_MTS_label-SC_seg.json index 09cbab100b..a4e0189c40 100644 --- a/derivatives/labels/sub-queensland01/anat/sub-queensland01_flip-2_mt-off_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-queensland01/anat/sub-queensland01_flip-2_mt-off_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-03 10:34:48" + "Date": "2021-06-03 10:34:48", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-queensland01/anat/sub-queensland01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-queensland01/anat/sub-queensland01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-queensland01/anat/sub-queensland01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-queensland01/anat/sub-queensland01_space-other_T1w_label-SC_seg.json b/derivatives/labels/sub-queensland01/anat/sub-queensland01_space-other_T1w_label-SC_seg.json index 586aae08e1..62f75344d1 100644 --- a/derivatives/labels/sub-queensland01/anat/sub-queensland01_space-other_T1w_label-SC_seg.json +++ b/derivatives/labels/sub-queensland01/anat/sub-queensland01_space-other_T1w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-06 10:35:41" + "Date": "2022-10-06 10:35:41", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-queensland01/anat/sub-queensland01_space-other_T2star_label-SC_seg.json b/derivatives/labels/sub-queensland01/anat/sub-queensland01_space-other_T2star_label-SC_seg.json index 4bef29594d..6b0ae7c890 100644 --- a/derivatives/labels/sub-queensland01/anat/sub-queensland01_space-other_T2star_label-SC_seg.json +++ b/derivatives/labels/sub-queensland01/anat/sub-queensland01_space-other_T2star_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:16" + "Date": "2021-06-08 15:06:16", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-queensland01/anat/sub-queensland01_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-queensland01/anat/sub-queensland01_space-other_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-queensland01/anat/sub-queensland01_space-other_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-queensland01/anat/sub-queensland01_space-other_T2w_label-SC_seg.json b/derivatives/labels/sub-queensland01/anat/sub-queensland01_space-other_T2w_label-SC_seg.json index 903b38e2fc..d2a9fdee97 100644 --- a/derivatives/labels/sub-queensland01/anat/sub-queensland01_space-other_T2w_label-SC_seg.json +++ b/derivatives/labels/sub-queensland01/anat/sub-queensland01_space-other_T2w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Yassine El Bouchaibi", - "Date": "2021-06-30 22:28:15" + "Date": "2021-06-30 22:28:15", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-queensland01/dwi/sub-queensland01_rec-average_dwi_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-queensland01/dwi/sub-queensland01_rec-average_dwi_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-queensland01/dwi/sub-queensland01_rec-average_dwi_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-queensland02/anat/sub-queensland02_flip-1_mt-on_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-queensland02/anat/sub-queensland02_flip-1_mt-on_space-other_MTS_label-SC_seg.json index a0c2399417..501e9e6252 100644 --- a/derivatives/labels/sub-queensland02/anat/sub-queensland02_flip-1_mt-on_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-queensland02/anat/sub-queensland02_flip-1_mt-on_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Yassine El Bouchaibi", - "Date": "2021-06-30 22:58:37" + "Date": "2021-06-30 22:58:37", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-queensland02/anat/sub-queensland02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-queensland02/anat/sub-queensland02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-queensland02/anat/sub-queensland02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-queensland02/anat/sub-queensland02_flip-2_mt-off_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-queensland02/anat/sub-queensland02_flip-2_mt-off_space-other_MTS_label-SC_seg.json index 4bef29594d..fee0c18a36 100644 --- a/derivatives/labels/sub-queensland02/anat/sub-queensland02_flip-2_mt-off_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-queensland02/anat/sub-queensland02_flip-2_mt-off_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:16" + "Date": "2021-06-08 15:06:16", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-queensland02/anat/sub-queensland02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-queensland02/anat/sub-queensland02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-queensland02/anat/sub-queensland02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-queensland02/anat/sub-queensland02_space-other_T1w_label-SC_seg.json b/derivatives/labels/sub-queensland02/anat/sub-queensland02_space-other_T1w_label-SC_seg.json index e6a7e89d63..b6134dd3fb 100644 --- a/derivatives/labels/sub-queensland02/anat/sub-queensland02_space-other_T1w_label-SC_seg.json +++ b/derivatives/labels/sub-queensland02/anat/sub-queensland02_space-other_T1w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "olivierML", - "Date": "2021-07-05 14:20:47" + "Date": "2021-07-05 14:20:47", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-queensland02/anat/sub-queensland02_space-other_T2star_label-SC_seg.json b/derivatives/labels/sub-queensland02/anat/sub-queensland02_space-other_T2star_label-SC_seg.json index 4bef29594d..6b0ae7c890 100644 --- a/derivatives/labels/sub-queensland02/anat/sub-queensland02_space-other_T2star_label-SC_seg.json +++ b/derivatives/labels/sub-queensland02/anat/sub-queensland02_space-other_T2star_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:16" + "Date": "2021-06-08 15:06:16", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-queensland02/anat/sub-queensland02_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-queensland02/anat/sub-queensland02_space-other_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-queensland02/anat/sub-queensland02_space-other_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-queensland02/anat/sub-queensland02_space-other_T2w_label-SC_seg.json b/derivatives/labels/sub-queensland02/anat/sub-queensland02_space-other_T2w_label-SC_seg.json index 4bef29594d..1d879c8793 100644 --- a/derivatives/labels/sub-queensland02/anat/sub-queensland02_space-other_T2w_label-SC_seg.json +++ b/derivatives/labels/sub-queensland02/anat/sub-queensland02_space-other_T2w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:16" + "Date": "2021-06-08 15:06:16", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-queensland02/dwi/sub-queensland02_rec-average_dwi_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-queensland02/dwi/sub-queensland02_rec-average_dwi_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-queensland02/dwi/sub-queensland02_rec-average_dwi_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-queensland03/anat/sub-queensland03_flip-1_mt-on_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-queensland03/anat/sub-queensland03_flip-1_mt-on_space-other_MTS_label-SC_seg.json index 4bef29594d..fee0c18a36 100644 --- a/derivatives/labels/sub-queensland03/anat/sub-queensland03_flip-1_mt-on_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-queensland03/anat/sub-queensland03_flip-1_mt-on_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:16" + "Date": "2021-06-08 15:06:16", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-queensland03/anat/sub-queensland03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-queensland03/anat/sub-queensland03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-queensland03/anat/sub-queensland03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-queensland03/anat/sub-queensland03_flip-2_mt-off_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-queensland03/anat/sub-queensland03_flip-2_mt-off_space-other_MTS_label-SC_seg.json index 09cbab100b..a4e0189c40 100644 --- a/derivatives/labels/sub-queensland03/anat/sub-queensland03_flip-2_mt-off_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-queensland03/anat/sub-queensland03_flip-2_mt-off_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-03 10:34:48" + "Date": "2021-06-03 10:34:48", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-queensland03/anat/sub-queensland03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-queensland03/anat/sub-queensland03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-queensland03/anat/sub-queensland03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-queensland03/anat/sub-queensland03_space-other_T1w_label-SC_seg.json b/derivatives/labels/sub-queensland03/anat/sub-queensland03_space-other_T1w_label-SC_seg.json index 6df69dc20a..9b23fc5b10 100644 --- a/derivatives/labels/sub-queensland03/anat/sub-queensland03_space-other_T1w_label-SC_seg.json +++ b/derivatives/labels/sub-queensland03/anat/sub-queensland03_space-other_T1w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "olivierML", - "Date": "2021-07-05 14:19:10" + "Date": "2021-07-05 14:19:10", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-queensland03/anat/sub-queensland03_space-other_T2star_label-SC_seg.json b/derivatives/labels/sub-queensland03/anat/sub-queensland03_space-other_T2star_label-SC_seg.json index 4bef29594d..6b0ae7c890 100644 --- a/derivatives/labels/sub-queensland03/anat/sub-queensland03_space-other_T2star_label-SC_seg.json +++ b/derivatives/labels/sub-queensland03/anat/sub-queensland03_space-other_T2star_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:16" + "Date": "2021-06-08 15:06:16", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-queensland03/anat/sub-queensland03_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-queensland03/anat/sub-queensland03_space-other_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-queensland03/anat/sub-queensland03_space-other_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-queensland03/anat/sub-queensland03_space-other_T2w_label-SC_seg.json b/derivatives/labels/sub-queensland03/anat/sub-queensland03_space-other_T2w_label-SC_seg.json index 660fb08766..0ff27f9c32 100644 --- a/derivatives/labels/sub-queensland03/anat/sub-queensland03_space-other_T2w_label-SC_seg.json +++ b/derivatives/labels/sub-queensland03/anat/sub-queensland03_space-other_T2w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-07-07 16:02:17" + "Date": "2021-07-07 16:02:17", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-queensland03/dwi/sub-queensland03_rec-average_dwi_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-queensland03/dwi/sub-queensland03_rec-average_dwi_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-queensland03/dwi/sub-queensland03_rec-average_dwi_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-queensland04/anat/sub-queensland04_flip-1_mt-on_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-queensland04/anat/sub-queensland04_flip-1_mt-on_space-other_MTS_label-SC_seg.json index 805daee13d..6670f31222 100644 --- a/derivatives/labels/sub-queensland04/anat/sub-queensland04_flip-1_mt-on_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-queensland04/anat/sub-queensland04_flip-1_mt-on_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-07-07 16:06:00" + "Date": "2021-07-07 16:06:00", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-queensland04/anat/sub-queensland04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-queensland04/anat/sub-queensland04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-queensland04/anat/sub-queensland04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-queensland04/anat/sub-queensland04_flip-2_mt-off_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-queensland04/anat/sub-queensland04_flip-2_mt-off_space-other_MTS_label-SC_seg.json index 52f1179f70..df3f0c7801 100644 --- a/derivatives/labels/sub-queensland04/anat/sub-queensland04_flip-2_mt-off_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-queensland04/anat/sub-queensland04_flip-2_mt-off_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Yassine El Bouchaibi", - "Date": "2021-06-30 22:29:16" + "Date": "2021-06-30 22:29:16", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-queensland04/anat/sub-queensland04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-queensland04/anat/sub-queensland04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-queensland04/anat/sub-queensland04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-queensland04/anat/sub-queensland04_space-other_T1w_label-SC_seg.json b/derivatives/labels/sub-queensland04/anat/sub-queensland04_space-other_T1w_label-SC_seg.json index 77b2aef307..d4d65a038f 100644 --- a/derivatives/labels/sub-queensland04/anat/sub-queensland04_space-other_T1w_label-SC_seg.json +++ b/derivatives/labels/sub-queensland04/anat/sub-queensland04_space-other_T1w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "olivierML", - "Date": "2021-07-05 14:20:10" + "Date": "2021-07-05 14:20:10", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-queensland04/anat/sub-queensland04_space-other_T2star_label-SC_seg.json b/derivatives/labels/sub-queensland04/anat/sub-queensland04_space-other_T2star_label-SC_seg.json index 4bef29594d..6b0ae7c890 100644 --- a/derivatives/labels/sub-queensland04/anat/sub-queensland04_space-other_T2star_label-SC_seg.json +++ b/derivatives/labels/sub-queensland04/anat/sub-queensland04_space-other_T2star_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:16" + "Date": "2021-06-08 15:06:16", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-queensland04/anat/sub-queensland04_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-queensland04/anat/sub-queensland04_space-other_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-queensland04/anat/sub-queensland04_space-other_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-queensland04/anat/sub-queensland04_space-other_T2w_label-SC_seg.json b/derivatives/labels/sub-queensland04/anat/sub-queensland04_space-other_T2w_label-SC_seg.json index 07d79d2074..3415af33e0 100644 --- a/derivatives/labels/sub-queensland04/anat/sub-queensland04_space-other_T2w_label-SC_seg.json +++ b/derivatives/labels/sub-queensland04/anat/sub-queensland04_space-other_T2w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Yassine El Bouchaibi", - "Date": "2021-06-30 21:53:46" + "Date": "2021-06-30 21:53:46", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-queensland04/dwi/sub-queensland04_rec-average_dwi_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-queensland04/dwi/sub-queensland04_rec-average_dwi_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-queensland04/dwi/sub-queensland04_rec-average_dwi_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-queensland05/anat/sub-queensland05_flip-1_mt-on_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-queensland05/anat/sub-queensland05_flip-1_mt-on_space-other_MTS_label-SC_seg.json index 4bef29594d..fee0c18a36 100644 --- a/derivatives/labels/sub-queensland05/anat/sub-queensland05_flip-1_mt-on_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-queensland05/anat/sub-queensland05_flip-1_mt-on_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:16" + "Date": "2021-06-08 15:06:16", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-queensland05/anat/sub-queensland05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-queensland05/anat/sub-queensland05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-queensland05/anat/sub-queensland05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-queensland05/anat/sub-queensland05_flip-2_mt-off_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-queensland05/anat/sub-queensland05_flip-2_mt-off_space-other_MTS_label-SC_seg.json index 7c7066ff75..8528cfeb3e 100644 --- a/derivatives/labels/sub-queensland05/anat/sub-queensland05_flip-2_mt-off_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-queensland05/anat/sub-queensland05_flip-2_mt-off_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Yassine El Bouchaibi", - "Date": "2021-06-30 22:42:31" + "Date": "2021-06-30 22:42:31", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-queensland05/anat/sub-queensland05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-queensland05/anat/sub-queensland05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-queensland05/anat/sub-queensland05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-queensland05/anat/sub-queensland05_space-other_T1w_label-SC_seg.json b/derivatives/labels/sub-queensland05/anat/sub-queensland05_space-other_T1w_label-SC_seg.json index 60646cf597..ca19373cf8 100644 --- a/derivatives/labels/sub-queensland05/anat/sub-queensland05_space-other_T1w_label-SC_seg.json +++ b/derivatives/labels/sub-queensland05/anat/sub-queensland05_space-other_T1w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "olivierML", - "Date": "2021-07-05 14:22:41" + "Date": "2021-07-05 14:22:41", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-queensland05/anat/sub-queensland05_space-other_T2star_label-SC_seg.json b/derivatives/labels/sub-queensland05/anat/sub-queensland05_space-other_T2star_label-SC_seg.json index 4bef29594d..6b0ae7c890 100644 --- a/derivatives/labels/sub-queensland05/anat/sub-queensland05_space-other_T2star_label-SC_seg.json +++ b/derivatives/labels/sub-queensland05/anat/sub-queensland05_space-other_T2star_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:16" + "Date": "2021-06-08 15:06:16", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-queensland05/anat/sub-queensland05_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-queensland05/anat/sub-queensland05_space-other_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-queensland05/anat/sub-queensland05_space-other_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-queensland05/anat/sub-queensland05_space-other_T2w_label-SC_seg.json b/derivatives/labels/sub-queensland05/anat/sub-queensland05_space-other_T2w_label-SC_seg.json index ba62d7eb12..e4a60a2582 100644 --- a/derivatives/labels/sub-queensland05/anat/sub-queensland05_space-other_T2w_label-SC_seg.json +++ b/derivatives/labels/sub-queensland05/anat/sub-queensland05_space-other_T2w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Yassine El Bouchaibi", - "Date": "2021-06-30 22:25:39" + "Date": "2021-06-30 22:25:39", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-queensland05/dwi/sub-queensland05_rec-average_dwi_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-queensland05/dwi/sub-queensland05_rec-average_dwi_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-queensland05/dwi/sub-queensland05_rec-average_dwi_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-queensland06/anat/sub-queensland06_flip-1_mt-on_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-queensland06/anat/sub-queensland06_flip-1_mt-on_space-other_MTS_label-SC_seg.json index 4bef29594d..fee0c18a36 100644 --- a/derivatives/labels/sub-queensland06/anat/sub-queensland06_flip-1_mt-on_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-queensland06/anat/sub-queensland06_flip-1_mt-on_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:16" + "Date": "2021-06-08 15:06:16", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-queensland06/anat/sub-queensland06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-queensland06/anat/sub-queensland06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-queensland06/anat/sub-queensland06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-queensland06/anat/sub-queensland06_flip-2_mt-off_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-queensland06/anat/sub-queensland06_flip-2_mt-off_space-other_MTS_label-SC_seg.json index 70415adbd9..1a24ef11f7 100644 --- a/derivatives/labels/sub-queensland06/anat/sub-queensland06_flip-2_mt-off_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-queensland06/anat/sub-queensland06_flip-2_mt-off_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Yassine El Bouchaibi", - "Date": "2021-06-30 22:30:56" + "Date": "2021-06-30 22:30:56", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-queensland06/anat/sub-queensland06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-queensland06/anat/sub-queensland06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-queensland06/anat/sub-queensland06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-queensland06/anat/sub-queensland06_space-other_T1w_label-SC_seg.json b/derivatives/labels/sub-queensland06/anat/sub-queensland06_space-other_T1w_label-SC_seg.json index dd95c0ca3a..bba39ad946 100644 --- a/derivatives/labels/sub-queensland06/anat/sub-queensland06_space-other_T1w_label-SC_seg.json +++ b/derivatives/labels/sub-queensland06/anat/sub-queensland06_space-other_T1w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "olivierML", - "Date": "2021-07-05 14:21:36" + "Date": "2021-07-05 14:21:36", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-queensland06/anat/sub-queensland06_space-other_T2star_label-SC_seg.json b/derivatives/labels/sub-queensland06/anat/sub-queensland06_space-other_T2star_label-SC_seg.json index 4bef29594d..6b0ae7c890 100644 --- a/derivatives/labels/sub-queensland06/anat/sub-queensland06_space-other_T2star_label-SC_seg.json +++ b/derivatives/labels/sub-queensland06/anat/sub-queensland06_space-other_T2star_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:16" + "Date": "2021-06-08 15:06:16", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-queensland06/anat/sub-queensland06_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-queensland06/anat/sub-queensland06_space-other_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-queensland06/anat/sub-queensland06_space-other_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-queensland06/anat/sub-queensland06_space-other_T2w_label-SC_seg.json b/derivatives/labels/sub-queensland06/anat/sub-queensland06_space-other_T2w_label-SC_seg.json index e1765553fd..6f380db2d6 100644 --- a/derivatives/labels/sub-queensland06/anat/sub-queensland06_space-other_T2w_label-SC_seg.json +++ b/derivatives/labels/sub-queensland06/anat/sub-queensland06_space-other_T2w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Yassine El Bouchaibi", - "Date": "2021-06-30 22:07:16" + "Date": "2021-06-30 22:07:16", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-queensland06/dwi/sub-queensland06_rec-average_dwi_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-queensland06/dwi/sub-queensland06_rec-average_dwi_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-queensland06/dwi/sub-queensland06_rec-average_dwi_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-sherbrooke01/anat/sub-sherbrooke01_flip-1_mt-on_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-sherbrooke01/anat/sub-sherbrooke01_flip-1_mt-on_space-other_MTS_label-SC_seg.json index 4bef29594d..fee0c18a36 100644 --- a/derivatives/labels/sub-sherbrooke01/anat/sub-sherbrooke01_flip-1_mt-on_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-sherbrooke01/anat/sub-sherbrooke01_flip-1_mt-on_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:16" + "Date": "2021-06-08 15:06:16", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-sherbrooke01/anat/sub-sherbrooke01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-sherbrooke01/anat/sub-sherbrooke01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-sherbrooke01/anat/sub-sherbrooke01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-sherbrooke01/anat/sub-sherbrooke01_flip-2_mt-off_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-sherbrooke01/anat/sub-sherbrooke01_flip-2_mt-off_space-other_MTS_label-SC_seg.json index 4bef29594d..fee0c18a36 100644 --- a/derivatives/labels/sub-sherbrooke01/anat/sub-sherbrooke01_flip-2_mt-off_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-sherbrooke01/anat/sub-sherbrooke01_flip-2_mt-off_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:16" + "Date": "2021-06-08 15:06:16", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-sherbrooke01/anat/sub-sherbrooke01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-sherbrooke01/anat/sub-sherbrooke01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-sherbrooke01/anat/sub-sherbrooke01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-sherbrooke01/anat/sub-sherbrooke01_space-other_T1w_label-SC_seg.json b/derivatives/labels/sub-sherbrooke01/anat/sub-sherbrooke01_space-other_T1w_label-SC_seg.json index 9c31805073..5a0d67322b 100644 --- a/derivatives/labels/sub-sherbrooke01/anat/sub-sherbrooke01_space-other_T1w_label-SC_seg.json +++ b/derivatives/labels/sub-sherbrooke01/anat/sub-sherbrooke01_space-other_T1w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-07-07 15:50:42" + "Date": "2021-07-07 15:50:42", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-sherbrooke01/anat/sub-sherbrooke01_space-other_T2star_gmlabel-SC_seg.json b/derivatives/labels/sub-sherbrooke01/anat/sub-sherbrooke01_space-other_T2star_gmlabel-SC_seg.json index 3e830bf0db..58d47c5ed2 100644 --- a/derivatives/labels/sub-sherbrooke01/anat/sub-sherbrooke01_space-other_T2star_gmlabel-SC_seg.json +++ b/derivatives/labels/sub-sherbrooke01/anat/sub-sherbrooke01_space-other_T2star_gmlabel-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-03 10:35:23" + "Date": "2021-06-03 10:35:23", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-sherbrooke01/anat/sub-sherbrooke01_space-other_T2star_label-SC_seg.json b/derivatives/labels/sub-sherbrooke01/anat/sub-sherbrooke01_space-other_T2star_label-SC_seg.json index 4bef29594d..6b0ae7c890 100644 --- a/derivatives/labels/sub-sherbrooke01/anat/sub-sherbrooke01_space-other_T2star_label-SC_seg.json +++ b/derivatives/labels/sub-sherbrooke01/anat/sub-sherbrooke01_space-other_T2star_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:16" + "Date": "2021-06-08 15:06:16", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-sherbrooke01/anat/sub-sherbrooke01_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-sherbrooke01/anat/sub-sherbrooke01_space-other_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-sherbrooke01/anat/sub-sherbrooke01_space-other_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-sherbrooke01/anat/sub-sherbrooke01_space-other_T2w_label-SC_seg.json b/derivatives/labels/sub-sherbrooke01/anat/sub-sherbrooke01_space-other_T2w_label-SC_seg.json index bcdeb79369..fa3de36212 100644 --- a/derivatives/labels/sub-sherbrooke01/anat/sub-sherbrooke01_space-other_T2w_label-SC_seg.json +++ b/derivatives/labels/sub-sherbrooke01/anat/sub-sherbrooke01_space-other_T2w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Yassine El Bouchaibi", - "Date": "2021-06-30 22:34:20" + "Date": "2021-06-30 22:34:20", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-sherbrooke01/dwi/sub-sherbrooke01_rec-average_dwi_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-sherbrooke01/dwi/sub-sherbrooke01_rec-average_dwi_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-sherbrooke01/dwi/sub-sherbrooke01_rec-average_dwi_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-sherbrooke02/anat/sub-sherbrooke02_flip-1_mt-on_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-sherbrooke02/anat/sub-sherbrooke02_flip-1_mt-on_space-other_MTS_label-SC_seg.json index a834f0b389..4b2f07e6d5 100644 --- a/derivatives/labels/sub-sherbrooke02/anat/sub-sherbrooke02_flip-1_mt-on_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-sherbrooke02/anat/sub-sherbrooke02_flip-1_mt-on_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Yassine El Bouchaibi", - "Date": "2021-06-30 22:59:33" + "Date": "2021-06-30 22:59:33", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-sherbrooke02/anat/sub-sherbrooke02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-sherbrooke02/anat/sub-sherbrooke02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-sherbrooke02/anat/sub-sherbrooke02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-sherbrooke02/anat/sub-sherbrooke02_flip-2_mt-off_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-sherbrooke02/anat/sub-sherbrooke02_flip-2_mt-off_space-other_MTS_label-SC_seg.json index e88c234a25..fc055dd528 100644 --- a/derivatives/labels/sub-sherbrooke02/anat/sub-sherbrooke02_flip-2_mt-off_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-sherbrooke02/anat/sub-sherbrooke02_flip-2_mt-off_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Yassine El Bouchaibi", - "Date": "2021-06-30 22:43:02" + "Date": "2021-06-30 22:43:02", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-sherbrooke02/anat/sub-sherbrooke02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-sherbrooke02/anat/sub-sherbrooke02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-sherbrooke02/anat/sub-sherbrooke02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-sherbrooke02/anat/sub-sherbrooke02_space-other_T1w_label-SC_seg.json b/derivatives/labels/sub-sherbrooke02/anat/sub-sherbrooke02_space-other_T1w_label-SC_seg.json index 3a3a493f05..5b5c7f536c 100644 --- a/derivatives/labels/sub-sherbrooke02/anat/sub-sherbrooke02_space-other_T1w_label-SC_seg.json +++ b/derivatives/labels/sub-sherbrooke02/anat/sub-sherbrooke02_space-other_T1w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "olivierML", - "Date": "2021-07-05 14:24:05" + "Date": "2021-07-05 14:24:05", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-sherbrooke02/anat/sub-sherbrooke02_space-other_T2star_label-SC_seg.json b/derivatives/labels/sub-sherbrooke02/anat/sub-sherbrooke02_space-other_T2star_label-SC_seg.json index 97e8758806..9ed8eb979f 100644 --- a/derivatives/labels/sub-sherbrooke02/anat/sub-sherbrooke02_space-other_T2star_label-SC_seg.json +++ b/derivatives/labels/sub-sherbrooke02/anat/sub-sherbrooke02_space-other_T2star_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:17" + "Date": "2021-06-08 15:06:17", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-sherbrooke02/anat/sub-sherbrooke02_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-sherbrooke02/anat/sub-sherbrooke02_space-other_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-sherbrooke02/anat/sub-sherbrooke02_space-other_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-sherbrooke02/anat/sub-sherbrooke02_space-other_T2w_label-SC_seg.json b/derivatives/labels/sub-sherbrooke02/anat/sub-sherbrooke02_space-other_T2w_label-SC_seg.json index d9ffb94158..de3208ce0a 100644 --- a/derivatives/labels/sub-sherbrooke02/anat/sub-sherbrooke02_space-other_T2w_label-SC_seg.json +++ b/derivatives/labels/sub-sherbrooke02/anat/sub-sherbrooke02_space-other_T2w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Yassine El Bouchaibi", - "Date": "2021-06-30 22:16:27" + "Date": "2021-06-30 22:16:27", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-sherbrooke02/dwi/sub-sherbrooke02_rec-average_dwi_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-sherbrooke02/dwi/sub-sherbrooke02_rec-average_dwi_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-sherbrooke02/dwi/sub-sherbrooke02_rec-average_dwi_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-sherbrooke03/anat/sub-sherbrooke03_flip-1_mt-on_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-sherbrooke03/anat/sub-sherbrooke03_flip-1_mt-on_space-other_MTS_label-SC_seg.json index 97e8758806..8b9ab6b5d1 100644 --- a/derivatives/labels/sub-sherbrooke03/anat/sub-sherbrooke03_flip-1_mt-on_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-sherbrooke03/anat/sub-sherbrooke03_flip-1_mt-on_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:17" + "Date": "2021-06-08 15:06:17", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-sherbrooke03/anat/sub-sherbrooke03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-sherbrooke03/anat/sub-sherbrooke03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-sherbrooke03/anat/sub-sherbrooke03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-sherbrooke03/anat/sub-sherbrooke03_flip-2_mt-off_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-sherbrooke03/anat/sub-sherbrooke03_flip-2_mt-off_space-other_MTS_label-SC_seg.json index 41d972b380..d1c59b0066 100644 --- a/derivatives/labels/sub-sherbrooke03/anat/sub-sherbrooke03_flip-2_mt-off_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-sherbrooke03/anat/sub-sherbrooke03_flip-2_mt-off_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-08-04 11:18:18" + "Date": "2021-08-04 11:18:18", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-sherbrooke03/anat/sub-sherbrooke03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-sherbrooke03/anat/sub-sherbrooke03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-sherbrooke03/anat/sub-sherbrooke03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-sherbrooke03/anat/sub-sherbrooke03_space-other_T1w_label-SC_seg.json b/derivatives/labels/sub-sherbrooke03/anat/sub-sherbrooke03_space-other_T1w_label-SC_seg.json index 58dd04dd1b..15765f794b 100644 --- a/derivatives/labels/sub-sherbrooke03/anat/sub-sherbrooke03_space-other_T1w_label-SC_seg.json +++ b/derivatives/labels/sub-sherbrooke03/anat/sub-sherbrooke03_space-other_T1w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-08-04 11:13:23" + "Date": "2021-08-04 11:13:23", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-sherbrooke03/anat/sub-sherbrooke03_space-other_T2star_gmlabel-SC_seg.json b/derivatives/labels/sub-sherbrooke03/anat/sub-sherbrooke03_space-other_T2star_gmlabel-SC_seg.json index 15ca20804f..9e9f41ac4a 100644 --- a/derivatives/labels/sub-sherbrooke03/anat/sub-sherbrooke03_space-other_T2star_gmlabel-SC_seg.json +++ b/derivatives/labels/sub-sherbrooke03/anat/sub-sherbrooke03_space-other_T2star_gmlabel-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-03 10:34:59" + "Date": "2021-06-03 10:34:59", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-sherbrooke03/anat/sub-sherbrooke03_space-other_T2star_label-SC_seg.json b/derivatives/labels/sub-sherbrooke03/anat/sub-sherbrooke03_space-other_T2star_label-SC_seg.json index 97e8758806..9ed8eb979f 100644 --- a/derivatives/labels/sub-sherbrooke03/anat/sub-sherbrooke03_space-other_T2star_label-SC_seg.json +++ b/derivatives/labels/sub-sherbrooke03/anat/sub-sherbrooke03_space-other_T2star_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:17" + "Date": "2021-06-08 15:06:17", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-sherbrooke03/anat/sub-sherbrooke03_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-sherbrooke03/anat/sub-sherbrooke03_space-other_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-sherbrooke03/anat/sub-sherbrooke03_space-other_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-sherbrooke03/anat/sub-sherbrooke03_space-other_T2w_label-SC_seg.json b/derivatives/labels/sub-sherbrooke03/anat/sub-sherbrooke03_space-other_T2w_label-SC_seg.json index 97e8758806..f9093b87a5 100644 --- a/derivatives/labels/sub-sherbrooke03/anat/sub-sherbrooke03_space-other_T2w_label-SC_seg.json +++ b/derivatives/labels/sub-sherbrooke03/anat/sub-sherbrooke03_space-other_T2w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:17" + "Date": "2021-06-08 15:06:17", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-sherbrooke03/dwi/sub-sherbrooke03_rec-average_dwi_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-sherbrooke03/dwi/sub-sherbrooke03_rec-average_dwi_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-sherbrooke03/dwi/sub-sherbrooke03_rec-average_dwi_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-sherbrooke04/anat/sub-sherbrooke04_flip-1_mt-on_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-sherbrooke04/anat/sub-sherbrooke04_flip-1_mt-on_space-other_MTS_label-SC_seg.json index 698d4a2835..cde89fa758 100644 --- a/derivatives/labels/sub-sherbrooke04/anat/sub-sherbrooke04_flip-1_mt-on_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-sherbrooke04/anat/sub-sherbrooke04_flip-1_mt-on_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Yassine El Bouchaibi", - "Date": "2021-07-01 00:28:56" + "Date": "2021-07-01 00:28:56", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-sherbrooke04/anat/sub-sherbrooke04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-sherbrooke04/anat/sub-sherbrooke04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-sherbrooke04/anat/sub-sherbrooke04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-sherbrooke04/anat/sub-sherbrooke04_flip-2_mt-off_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-sherbrooke04/anat/sub-sherbrooke04_flip-2_mt-off_space-other_MTS_label-SC_seg.json index 619fb00da1..5dbf796964 100644 --- a/derivatives/labels/sub-sherbrooke04/anat/sub-sherbrooke04_flip-2_mt-off_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-sherbrooke04/anat/sub-sherbrooke04_flip-2_mt-off_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Yassine El Bouchaibi", - "Date": "2021-07-01 00:25:31" + "Date": "2021-07-01 00:25:31", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-sherbrooke04/anat/sub-sherbrooke04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-sherbrooke04/anat/sub-sherbrooke04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-sherbrooke04/anat/sub-sherbrooke04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-sherbrooke04/anat/sub-sherbrooke04_space-other_T1w_label-SC_seg.json b/derivatives/labels/sub-sherbrooke04/anat/sub-sherbrooke04_space-other_T1w_label-SC_seg.json index b5ccad58bb..b1fb8d614d 100644 --- a/derivatives/labels/sub-sherbrooke04/anat/sub-sherbrooke04_space-other_T1w_label-SC_seg.json +++ b/derivatives/labels/sub-sherbrooke04/anat/sub-sherbrooke04_space-other_T1w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-07-07 15:56:32" + "Date": "2021-07-07 15:56:32", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-sherbrooke04/anat/sub-sherbrooke04_space-other_T2star_label-SC_seg.json b/derivatives/labels/sub-sherbrooke04/anat/sub-sherbrooke04_space-other_T2star_label-SC_seg.json index 97e8758806..9ed8eb979f 100644 --- a/derivatives/labels/sub-sherbrooke04/anat/sub-sherbrooke04_space-other_T2star_label-SC_seg.json +++ b/derivatives/labels/sub-sherbrooke04/anat/sub-sherbrooke04_space-other_T2star_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:17" + "Date": "2021-06-08 15:06:17", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-sherbrooke04/anat/sub-sherbrooke04_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-sherbrooke04/anat/sub-sherbrooke04_space-other_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-sherbrooke04/anat/sub-sherbrooke04_space-other_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-sherbrooke04/anat/sub-sherbrooke04_space-other_T2w_label-SC_seg.json b/derivatives/labels/sub-sherbrooke04/anat/sub-sherbrooke04_space-other_T2w_label-SC_seg.json index 19996527dd..5c8741f0e7 100644 --- a/derivatives/labels/sub-sherbrooke04/anat/sub-sherbrooke04_space-other_T2w_label-SC_seg.json +++ b/derivatives/labels/sub-sherbrooke04/anat/sub-sherbrooke04_space-other_T2w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-07-07 16:06:49" + "Date": "2021-07-07 16:06:49", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-sherbrooke04/dwi/sub-sherbrooke04_rec-average_dwi_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-sherbrooke04/dwi/sub-sherbrooke04_rec-average_dwi_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-sherbrooke04/dwi/sub-sherbrooke04_rec-average_dwi_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-sherbrooke05/anat/sub-sherbrooke05_flip-1_mt-on_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-sherbrooke05/anat/sub-sherbrooke05_flip-1_mt-on_space-other_MTS_label-SC_seg.json index bd27ac3e88..1e4d5d8bd3 100644 --- a/derivatives/labels/sub-sherbrooke05/anat/sub-sherbrooke05_flip-1_mt-on_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-sherbrooke05/anat/sub-sherbrooke05_flip-1_mt-on_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Yassine El Bouchaibi", - "Date": "2021-07-01 01:04:21" + "Date": "2021-07-01 01:04:21", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-sherbrooke05/anat/sub-sherbrooke05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-sherbrooke05/anat/sub-sherbrooke05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-sherbrooke05/anat/sub-sherbrooke05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-sherbrooke05/anat/sub-sherbrooke05_flip-2_mt-off_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-sherbrooke05/anat/sub-sherbrooke05_flip-2_mt-off_space-other_MTS_label-SC_seg.json index 0c94a67f14..260b1572b1 100644 --- a/derivatives/labels/sub-sherbrooke05/anat/sub-sherbrooke05_flip-2_mt-off_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-sherbrooke05/anat/sub-sherbrooke05_flip-2_mt-off_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-07-07 16:08:17" + "Date": "2021-07-07 16:08:17", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-sherbrooke05/anat/sub-sherbrooke05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-sherbrooke05/anat/sub-sherbrooke05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-sherbrooke05/anat/sub-sherbrooke05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-sherbrooke05/anat/sub-sherbrooke05_space-other_T1w_label-SC_seg.json b/derivatives/labels/sub-sherbrooke05/anat/sub-sherbrooke05_space-other_T1w_label-SC_seg.json index 5e4f093784..68b842dce8 100644 --- a/derivatives/labels/sub-sherbrooke05/anat/sub-sherbrooke05_space-other_T1w_label-SC_seg.json +++ b/derivatives/labels/sub-sherbrooke05/anat/sub-sherbrooke05_space-other_T1w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Yassine El Bouchaibi", - "Date": "2021-07-01 00:33:43" + "Date": "2021-07-01 00:33:43", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-sherbrooke05/anat/sub-sherbrooke05_space-other_T2star_label-SC_seg.json b/derivatives/labels/sub-sherbrooke05/anat/sub-sherbrooke05_space-other_T2star_label-SC_seg.json index 97e8758806..9ed8eb979f 100644 --- a/derivatives/labels/sub-sherbrooke05/anat/sub-sherbrooke05_space-other_T2star_label-SC_seg.json +++ b/derivatives/labels/sub-sherbrooke05/anat/sub-sherbrooke05_space-other_T2star_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:17" + "Date": "2021-06-08 15:06:17", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-sherbrooke05/anat/sub-sherbrooke05_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-sherbrooke05/anat/sub-sherbrooke05_space-other_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-sherbrooke05/anat/sub-sherbrooke05_space-other_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-sherbrooke05/anat/sub-sherbrooke05_space-other_T2w_label-SC_seg.json b/derivatives/labels/sub-sherbrooke05/anat/sub-sherbrooke05_space-other_T2w_label-SC_seg.json index 62b02422de..a14e9381d9 100644 --- a/derivatives/labels/sub-sherbrooke05/anat/sub-sherbrooke05_space-other_T2w_label-SC_seg.json +++ b/derivatives/labels/sub-sherbrooke05/anat/sub-sherbrooke05_space-other_T2w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Yassine El Bouchaibi", - "Date": "2021-07-01 00:44:09" + "Date": "2021-07-01 00:44:09", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-sherbrooke05/dwi/sub-sherbrooke05_rec-average_dwi_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-sherbrooke05/dwi/sub-sherbrooke05_rec-average_dwi_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-sherbrooke05/dwi/sub-sherbrooke05_rec-average_dwi_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-sherbrooke06/anat/sub-sherbrooke06_flip-1_mt-on_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-sherbrooke06/anat/sub-sherbrooke06_flip-1_mt-on_space-other_MTS_label-SC_seg.json index 97e8758806..8b9ab6b5d1 100644 --- a/derivatives/labels/sub-sherbrooke06/anat/sub-sherbrooke06_flip-1_mt-on_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-sherbrooke06/anat/sub-sherbrooke06_flip-1_mt-on_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:17" + "Date": "2021-06-08 15:06:17", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-sherbrooke06/anat/sub-sherbrooke06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-sherbrooke06/anat/sub-sherbrooke06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-sherbrooke06/anat/sub-sherbrooke06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-sherbrooke06/anat/sub-sherbrooke06_flip-2_mt-off_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-sherbrooke06/anat/sub-sherbrooke06_flip-2_mt-off_space-other_MTS_label-SC_seg.json index 37a428bc52..fd22f0b63b 100644 --- a/derivatives/labels/sub-sherbrooke06/anat/sub-sherbrooke06_flip-2_mt-off_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-sherbrooke06/anat/sub-sherbrooke06_flip-2_mt-off_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Yassine El Bouchaibi", - "Date": "2021-07-02 14:22:17" + "Date": "2021-07-02 14:22:17", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-sherbrooke06/anat/sub-sherbrooke06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-sherbrooke06/anat/sub-sherbrooke06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-sherbrooke06/anat/sub-sherbrooke06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-sherbrooke06/anat/sub-sherbrooke06_space-other_T1w_label-SC_seg.json b/derivatives/labels/sub-sherbrooke06/anat/sub-sherbrooke06_space-other_T1w_label-SC_seg.json index 97e8758806..c88ef545bd 100644 --- a/derivatives/labels/sub-sherbrooke06/anat/sub-sherbrooke06_space-other_T1w_label-SC_seg.json +++ b/derivatives/labels/sub-sherbrooke06/anat/sub-sherbrooke06_space-other_T1w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:17" + "Date": "2021-06-08 15:06:17", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-sherbrooke06/anat/sub-sherbrooke06_space-other_T2star_label-SC_seg.json b/derivatives/labels/sub-sherbrooke06/anat/sub-sherbrooke06_space-other_T2star_label-SC_seg.json index 97e8758806..9ed8eb979f 100644 --- a/derivatives/labels/sub-sherbrooke06/anat/sub-sherbrooke06_space-other_T2star_label-SC_seg.json +++ b/derivatives/labels/sub-sherbrooke06/anat/sub-sherbrooke06_space-other_T2star_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:17" + "Date": "2021-06-08 15:06:17", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-sherbrooke06/anat/sub-sherbrooke06_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-sherbrooke06/anat/sub-sherbrooke06_space-other_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-sherbrooke06/anat/sub-sherbrooke06_space-other_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-sherbrooke06/anat/sub-sherbrooke06_space-other_T2w_label-SC_seg.json b/derivatives/labels/sub-sherbrooke06/anat/sub-sherbrooke06_space-other_T2w_label-SC_seg.json index 2746aec191..ef690637ad 100644 --- a/derivatives/labels/sub-sherbrooke06/anat/sub-sherbrooke06_space-other_T2w_label-SC_seg.json +++ b/derivatives/labels/sub-sherbrooke06/anat/sub-sherbrooke06_space-other_T2w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-07-07 16:10:02" + "Date": "2021-07-07 16:10:02", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-sherbrooke06/dwi/sub-sherbrooke06_rec-average_dwi_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-sherbrooke06/dwi/sub-sherbrooke06_rec-average_dwi_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-sherbrooke06/dwi/sub-sherbrooke06_rec-average_dwi_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-sherbrooke07/anat/sub-sherbrooke07_flip-1_mt-on_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-sherbrooke07/anat/sub-sherbrooke07_flip-1_mt-on_space-other_MTS_label-SC_seg.json index 6393463c24..c7f67049b9 100644 --- a/derivatives/labels/sub-sherbrooke07/anat/sub-sherbrooke07_flip-1_mt-on_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-sherbrooke07/anat/sub-sherbrooke07_flip-1_mt-on_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Yassine El Bouchaibi", - "Date": "2021-07-02 14:38:08" + "Date": "2021-07-02 14:38:08", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-sherbrooke07/anat/sub-sherbrooke07_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-sherbrooke07/anat/sub-sherbrooke07_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-sherbrooke07/anat/sub-sherbrooke07_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-sherbrooke07/anat/sub-sherbrooke07_flip-2_mt-off_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-sherbrooke07/anat/sub-sherbrooke07_flip-2_mt-off_space-other_MTS_label-SC_seg.json index 97e8758806..8b9ab6b5d1 100644 --- a/derivatives/labels/sub-sherbrooke07/anat/sub-sherbrooke07_flip-2_mt-off_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-sherbrooke07/anat/sub-sherbrooke07_flip-2_mt-off_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:17" + "Date": "2021-06-08 15:06:17", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-sherbrooke07/anat/sub-sherbrooke07_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-sherbrooke07/anat/sub-sherbrooke07_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-sherbrooke07/anat/sub-sherbrooke07_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-sherbrooke07/anat/sub-sherbrooke07_space-other_T1w_label-SC_seg.json b/derivatives/labels/sub-sherbrooke07/anat/sub-sherbrooke07_space-other_T1w_label-SC_seg.json index 2c1c6bdb86..660e6c5fff 100644 --- a/derivatives/labels/sub-sherbrooke07/anat/sub-sherbrooke07_space-other_T1w_label-SC_seg.json +++ b/derivatives/labels/sub-sherbrooke07/anat/sub-sherbrooke07_space-other_T1w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Yassine El Bouchaibi", - "Date": "2021-07-01 00:39:04" + "Date": "2021-07-01 00:39:04", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-sherbrooke07/anat/sub-sherbrooke07_space-other_T2star_label-SC_seg.json b/derivatives/labels/sub-sherbrooke07/anat/sub-sherbrooke07_space-other_T2star_label-SC_seg.json index 97e8758806..9ed8eb979f 100644 --- a/derivatives/labels/sub-sherbrooke07/anat/sub-sherbrooke07_space-other_T2star_label-SC_seg.json +++ b/derivatives/labels/sub-sherbrooke07/anat/sub-sherbrooke07_space-other_T2star_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:17" + "Date": "2021-06-08 15:06:17", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-sherbrooke07/anat/sub-sherbrooke07_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-sherbrooke07/anat/sub-sherbrooke07_space-other_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-sherbrooke07/anat/sub-sherbrooke07_space-other_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-sherbrooke07/anat/sub-sherbrooke07_space-other_T2w_label-SC_seg.json b/derivatives/labels/sub-sherbrooke07/anat/sub-sherbrooke07_space-other_T2w_label-SC_seg.json index 97e8758806..f9093b87a5 100644 --- a/derivatives/labels/sub-sherbrooke07/anat/sub-sherbrooke07_space-other_T2w_label-SC_seg.json +++ b/derivatives/labels/sub-sherbrooke07/anat/sub-sherbrooke07_space-other_T2w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:17" + "Date": "2021-06-08 15:06:17", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-sherbrooke07/dwi/sub-sherbrooke07_rec-average_dwi_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-sherbrooke07/dwi/sub-sherbrooke07_rec-average_dwi_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-sherbrooke07/dwi/sub-sherbrooke07_rec-average_dwi_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-stanford01/anat/sub-stanford01_flip-1_mt-on_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-stanford01/anat/sub-stanford01_flip-1_mt-on_space-other_MTS_label-SC_seg.json index 1bd3b531d8..b9e153110d 100644 --- a/derivatives/labels/sub-stanford01/anat/sub-stanford01_flip-1_mt-on_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-stanford01/anat/sub-stanford01_flip-1_mt-on_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Yassine El Bouchaibi", - "Date": "2021-07-02 14:40:18" + "Date": "2021-07-02 14:40:18", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-stanford01/anat/sub-stanford01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-stanford01/anat/sub-stanford01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-stanford01/anat/sub-stanford01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-stanford01/anat/sub-stanford01_flip-2_mt-off_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-stanford01/anat/sub-stanford01_flip-2_mt-off_space-other_MTS_label-SC_seg.json index c6e7f305fd..74f0dc59d9 100644 --- a/derivatives/labels/sub-stanford01/anat/sub-stanford01_flip-2_mt-off_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-stanford01/anat/sub-stanford01_flip-2_mt-off_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-07-07 16:11:08" + "Date": "2021-07-07 16:11:08", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-stanford01/anat/sub-stanford01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-stanford01/anat/sub-stanford01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-stanford01/anat/sub-stanford01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-stanford01/anat/sub-stanford01_space-other_T1w_label-SC_seg.json b/derivatives/labels/sub-stanford01/anat/sub-stanford01_space-other_T1w_label-SC_seg.json index 6f9b4c8e48..293ea8ca00 100644 --- a/derivatives/labels/sub-stanford01/anat/sub-stanford01_space-other_T1w_label-SC_seg.json +++ b/derivatives/labels/sub-stanford01/anat/sub-stanford01_space-other_T1w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Yassine El Bouchaibi", - "Date": "2021-07-01 00:50:55" + "Date": "2021-07-01 00:50:55", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-stanford01/anat/sub-stanford01_space-other_T2star_label-SC_seg.json b/derivatives/labels/sub-stanford01/anat/sub-stanford01_space-other_T2star_label-SC_seg.json index 8627ea19ee..3d81c4a846 100644 --- a/derivatives/labels/sub-stanford01/anat/sub-stanford01_space-other_T2star_label-SC_seg.json +++ b/derivatives/labels/sub-stanford01/anat/sub-stanford01_space-other_T2star_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-06 10:38:24" + "Date": "2022-10-06 10:38:24", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-stanford01/anat/sub-stanford01_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-stanford01/anat/sub-stanford01_space-other_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-stanford01/anat/sub-stanford01_space-other_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-stanford01/anat/sub-stanford01_space-other_T2w_label-SC_seg.json b/derivatives/labels/sub-stanford01/anat/sub-stanford01_space-other_T2w_label-SC_seg.json index b06a76ccc9..3c2da792d3 100644 --- a/derivatives/labels/sub-stanford01/anat/sub-stanford01_space-other_T2w_label-SC_seg.json +++ b/derivatives/labels/sub-stanford01/anat/sub-stanford01_space-other_T2w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Yassine El Bouchaibi", - "Date": "2021-07-02 14:24:49" + "Date": "2021-07-02 14:24:49", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-stanford01/dwi/sub-stanford01_rec-average_dwi_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-stanford01/dwi/sub-stanford01_rec-average_dwi_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-stanford01/dwi/sub-stanford01_rec-average_dwi_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-stanford02/anat/sub-stanford02_flip-1_mt-on_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-stanford02/anat/sub-stanford02_flip-1_mt-on_space-other_MTS_label-SC_seg.json index 97e8758806..8b9ab6b5d1 100644 --- a/derivatives/labels/sub-stanford02/anat/sub-stanford02_flip-1_mt-on_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-stanford02/anat/sub-stanford02_flip-1_mt-on_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:17" + "Date": "2021-06-08 15:06:17", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-stanford02/anat/sub-stanford02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-stanford02/anat/sub-stanford02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-stanford02/anat/sub-stanford02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-stanford02/anat/sub-stanford02_flip-2_mt-off_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-stanford02/anat/sub-stanford02_flip-2_mt-off_space-other_MTS_label-SC_seg.json index 552b87d198..e99c6bd3a6 100644 --- a/derivatives/labels/sub-stanford02/anat/sub-stanford02_flip-2_mt-off_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-stanford02/anat/sub-stanford02_flip-2_mt-off_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-03 10:35:15" + "Date": "2021-06-03 10:35:15", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-stanford02/anat/sub-stanford02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-stanford02/anat/sub-stanford02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-stanford02/anat/sub-stanford02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-stanford02/anat/sub-stanford02_space-other_T1w_label-SC_seg.json b/derivatives/labels/sub-stanford02/anat/sub-stanford02_space-other_T1w_label-SC_seg.json index b741338fb6..8792f5ef9d 100644 --- a/derivatives/labels/sub-stanford02/anat/sub-stanford02_space-other_T1w_label-SC_seg.json +++ b/derivatives/labels/sub-stanford02/anat/sub-stanford02_space-other_T1w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Yassine El Bouchaibi", - "Date": "2021-07-01 00:59:20" + "Date": "2021-07-01 00:59:20", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-stanford02/anat/sub-stanford02_space-other_T2star_label-SC_seg.json b/derivatives/labels/sub-stanford02/anat/sub-stanford02_space-other_T2star_label-SC_seg.json index 97e8758806..9ed8eb979f 100644 --- a/derivatives/labels/sub-stanford02/anat/sub-stanford02_space-other_T2star_label-SC_seg.json +++ b/derivatives/labels/sub-stanford02/anat/sub-stanford02_space-other_T2star_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:17" + "Date": "2021-06-08 15:06:17", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-stanford02/anat/sub-stanford02_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-stanford02/anat/sub-stanford02_space-other_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-stanford02/anat/sub-stanford02_space-other_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-stanford02/anat/sub-stanford02_space-other_T2w_label-SC_seg.json b/derivatives/labels/sub-stanford02/anat/sub-stanford02_space-other_T2w_label-SC_seg.json index de338744cb..2d37f6f5e0 100644 --- a/derivatives/labels/sub-stanford02/anat/sub-stanford02_space-other_T2w_label-SC_seg.json +++ b/derivatives/labels/sub-stanford02/anat/sub-stanford02_space-other_T2w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Yassine El Bouchaibi", - "Date": "2021-07-02 14:26:45" + "Date": "2021-07-02 14:26:45", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-stanford02/dwi/sub-stanford02_rec-average_dwi_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-stanford02/dwi/sub-stanford02_rec-average_dwi_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-stanford02/dwi/sub-stanford02_rec-average_dwi_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-stanford03/anat/sub-stanford03_flip-1_mt-on_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-stanford03/anat/sub-stanford03_flip-1_mt-on_space-other_MTS_label-SC_seg.json index 45f510b5fd..24c59762bb 100644 --- a/derivatives/labels/sub-stanford03/anat/sub-stanford03_flip-1_mt-on_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-stanford03/anat/sub-stanford03_flip-1_mt-on_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Yassine El Bouchaibi", - "Date": "2021-07-02 15:04:59" + "Date": "2021-07-02 15:04:59", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-stanford03/anat/sub-stanford03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-stanford03/anat/sub-stanford03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-stanford03/anat/sub-stanford03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-stanford03/anat/sub-stanford03_flip-2_mt-off_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-stanford03/anat/sub-stanford03_flip-2_mt-off_space-other_MTS_label-SC_seg.json index 56a7d1f559..4278a83773 100644 --- a/derivatives/labels/sub-stanford03/anat/sub-stanford03_flip-2_mt-off_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-stanford03/anat/sub-stanford03_flip-2_mt-off_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-07-07 16:12:20" + "Date": "2021-07-07 16:12:20", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-stanford03/anat/sub-stanford03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-stanford03/anat/sub-stanford03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-stanford03/anat/sub-stanford03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-stanford03/anat/sub-stanford03_space-other_T1w_label-SC_seg.json b/derivatives/labels/sub-stanford03/anat/sub-stanford03_space-other_T1w_label-SC_seg.json index 0199df01b8..b6371d2947 100644 --- a/derivatives/labels/sub-stanford03/anat/sub-stanford03_space-other_T1w_label-SC_seg.json +++ b/derivatives/labels/sub-stanford03/anat/sub-stanford03_space-other_T1w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Yassine El Bouchaibi", - "Date": "2021-07-01 01:03:43" + "Date": "2021-07-01 01:03:43", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-stanford03/anat/sub-stanford03_space-other_T2star_label-SC_seg.json b/derivatives/labels/sub-stanford03/anat/sub-stanford03_space-other_T2star_label-SC_seg.json index 97e8758806..9ed8eb979f 100644 --- a/derivatives/labels/sub-stanford03/anat/sub-stanford03_space-other_T2star_label-SC_seg.json +++ b/derivatives/labels/sub-stanford03/anat/sub-stanford03_space-other_T2star_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:17" + "Date": "2021-06-08 15:06:17", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-stanford03/anat/sub-stanford03_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-stanford03/anat/sub-stanford03_space-other_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-stanford03/anat/sub-stanford03_space-other_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-stanford03/anat/sub-stanford03_space-other_T2w_label-SC_seg.json b/derivatives/labels/sub-stanford03/anat/sub-stanford03_space-other_T2w_label-SC_seg.json index fc37051a78..8d9790ee18 100644 --- a/derivatives/labels/sub-stanford03/anat/sub-stanford03_space-other_T2w_label-SC_seg.json +++ b/derivatives/labels/sub-stanford03/anat/sub-stanford03_space-other_T2w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Yassine El Bouchaibi", - "Date": "2021-07-02 14:33:13" + "Date": "2021-07-02 14:33:13", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-stanford03/dwi/sub-stanford03_rec-average_dwi_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-stanford03/dwi/sub-stanford03_rec-average_dwi_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-stanford03/dwi/sub-stanford03_rec-average_dwi_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-stanford04/anat/sub-stanford04_flip-1_mt-on_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-stanford04/anat/sub-stanford04_flip-1_mt-on_space-other_MTS_label-SC_seg.json index ce33205e2e..c008ca0b24 100644 --- a/derivatives/labels/sub-stanford04/anat/sub-stanford04_flip-1_mt-on_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-stanford04/anat/sub-stanford04_flip-1_mt-on_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Yassine El Bouchaibi", - "Date": "2021-07-02 15:07:42" + "Date": "2021-07-02 15:07:42", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-stanford04/anat/sub-stanford04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-stanford04/anat/sub-stanford04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-stanford04/anat/sub-stanford04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-stanford04/anat/sub-stanford04_flip-2_mt-off_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-stanford04/anat/sub-stanford04_flip-2_mt-off_space-other_MTS_label-SC_seg.json index 09cbab100b..a4e0189c40 100644 --- a/derivatives/labels/sub-stanford04/anat/sub-stanford04_flip-2_mt-off_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-stanford04/anat/sub-stanford04_flip-2_mt-off_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-03 10:34:48" + "Date": "2021-06-03 10:34:48", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-stanford04/anat/sub-stanford04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-stanford04/anat/sub-stanford04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-stanford04/anat/sub-stanford04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-stanford04/anat/sub-stanford04_space-other_T1w_label-SC_seg.json b/derivatives/labels/sub-stanford04/anat/sub-stanford04_space-other_T1w_label-SC_seg.json index a3da215938..054184818a 100644 --- a/derivatives/labels/sub-stanford04/anat/sub-stanford04_space-other_T1w_label-SC_seg.json +++ b/derivatives/labels/sub-stanford04/anat/sub-stanford04_space-other_T1w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-08-04 11:11:25" + "Date": "2021-08-04 11:11:25", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-stanford04/anat/sub-stanford04_space-other_T2star_label-SC_seg.json b/derivatives/labels/sub-stanford04/anat/sub-stanford04_space-other_T2star_label-SC_seg.json index 672fd035ab..e67a003ba5 100644 --- a/derivatives/labels/sub-stanford04/anat/sub-stanford04_space-other_T2star_label-SC_seg.json +++ b/derivatives/labels/sub-stanford04/anat/sub-stanford04_space-other_T2star_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-06 10:43:06" + "Date": "2022-10-06 10:43:06", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-stanford04/anat/sub-stanford04_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-stanford04/anat/sub-stanford04_space-other_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-stanford04/anat/sub-stanford04_space-other_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-stanford04/anat/sub-stanford04_space-other_T2w_label-SC_seg.json b/derivatives/labels/sub-stanford04/anat/sub-stanford04_space-other_T2w_label-SC_seg.json index 3452c02ca0..382b2662cc 100644 --- a/derivatives/labels/sub-stanford04/anat/sub-stanford04_space-other_T2w_label-SC_seg.json +++ b/derivatives/labels/sub-stanford04/anat/sub-stanford04_space-other_T2w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Yassine El Bouchaibi", - "Date": "2021-07-02 14:39:25" + "Date": "2021-07-02 14:39:25", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-stanford04/dwi/sub-stanford04_rec-average_dwi_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-stanford04/dwi/sub-stanford04_rec-average_dwi_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-stanford04/dwi/sub-stanford04_rec-average_dwi_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-stanford05/anat/sub-stanford05_flip-1_mt-on_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-stanford05/anat/sub-stanford05_flip-1_mt-on_space-other_MTS_label-SC_seg.json index 99c03b9c07..8fa7e68984 100644 --- a/derivatives/labels/sub-stanford05/anat/sub-stanford05_flip-1_mt-on_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-stanford05/anat/sub-stanford05_flip-1_mt-on_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Yassine El Bouchaibi", - "Date": "2021-07-02 15:09:15" + "Date": "2021-07-02 15:09:15", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-stanford05/anat/sub-stanford05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-stanford05/anat/sub-stanford05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-stanford05/anat/sub-stanford05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-stanford05/anat/sub-stanford05_flip-2_mt-off_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-stanford05/anat/sub-stanford05_flip-2_mt-off_space-other_MTS_label-SC_seg.json index 6e2bd03e2f..4e592aed35 100644 --- a/derivatives/labels/sub-stanford05/anat/sub-stanford05_flip-2_mt-off_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-stanford05/anat/sub-stanford05_flip-2_mt-off_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-03 10:35:19" + "Date": "2021-06-03 10:35:19", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-stanford05/anat/sub-stanford05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-stanford05/anat/sub-stanford05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-stanford05/anat/sub-stanford05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-stanford05/anat/sub-stanford05_space-other_T1w_label-SC_seg.json b/derivatives/labels/sub-stanford05/anat/sub-stanford05_space-other_T1w_label-SC_seg.json index 83e84be7e6..7141cd063a 100644 --- a/derivatives/labels/sub-stanford05/anat/sub-stanford05_space-other_T1w_label-SC_seg.json +++ b/derivatives/labels/sub-stanford05/anat/sub-stanford05_space-other_T1w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Yassine El Bouchaibi", - "Date": "2021-07-02 14:21:17" + "Date": "2021-07-02 14:21:17", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-stanford05/anat/sub-stanford05_space-other_T2star_label-SC_seg.json b/derivatives/labels/sub-stanford05/anat/sub-stanford05_space-other_T2star_label-SC_seg.json index dafb8d8cbe..28da659c0f 100644 --- a/derivatives/labels/sub-stanford05/anat/sub-stanford05_space-other_T2star_label-SC_seg.json +++ b/derivatives/labels/sub-stanford05/anat/sub-stanford05_space-other_T2star_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:18" + "Date": "2021-06-08 15:06:18", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-stanford05/anat/sub-stanford05_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-stanford05/anat/sub-stanford05_space-other_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-stanford05/anat/sub-stanford05_space-other_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-stanford05/anat/sub-stanford05_space-other_T2w_label-SC_seg.json b/derivatives/labels/sub-stanford05/anat/sub-stanford05_space-other_T2w_label-SC_seg.json index dafb8d8cbe..f958114723 100644 --- a/derivatives/labels/sub-stanford05/anat/sub-stanford05_space-other_T2w_label-SC_seg.json +++ b/derivatives/labels/sub-stanford05/anat/sub-stanford05_space-other_T2w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:18" + "Date": "2021-06-08 15:06:18", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-stanford05/dwi/sub-stanford05_rec-average_dwi_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-stanford05/dwi/sub-stanford05_rec-average_dwi_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-stanford05/dwi/sub-stanford05_rec-average_dwi_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-stanford06/anat/sub-stanford06_flip-1_mt-on_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-stanford06/anat/sub-stanford06_flip-1_mt-on_space-other_MTS_label-SC_seg.json index dafb8d8cbe..df5aa0c546 100644 --- a/derivatives/labels/sub-stanford06/anat/sub-stanford06_flip-1_mt-on_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-stanford06/anat/sub-stanford06_flip-1_mt-on_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:18" + "Date": "2021-06-08 15:06:18", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-stanford06/anat/sub-stanford06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-stanford06/anat/sub-stanford06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-stanford06/anat/sub-stanford06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-stanford06/anat/sub-stanford06_flip-2_mt-off_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-stanford06/anat/sub-stanford06_flip-2_mt-off_space-other_MTS_label-SC_seg.json index 3e830bf0db..6f252f1d77 100644 --- a/derivatives/labels/sub-stanford06/anat/sub-stanford06_flip-2_mt-off_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-stanford06/anat/sub-stanford06_flip-2_mt-off_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-03 10:35:23" + "Date": "2021-06-03 10:35:23", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-stanford06/anat/sub-stanford06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-stanford06/anat/sub-stanford06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-stanford06/anat/sub-stanford06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-stanford06/anat/sub-stanford06_space-other_T1w_label-SC_seg.json b/derivatives/labels/sub-stanford06/anat/sub-stanford06_space-other_T1w_label-SC_seg.json index 061600a2be..f817df6a31 100644 --- a/derivatives/labels/sub-stanford06/anat/sub-stanford06_space-other_T1w_label-SC_seg.json +++ b/derivatives/labels/sub-stanford06/anat/sub-stanford06_space-other_T1w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-08-04 12:50:07" + "Date": "2021-08-04 12:50:07", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-stanford06/anat/sub-stanford06_space-other_T2star_gmlabel-SC_seg.json b/derivatives/labels/sub-stanford06/anat/sub-stanford06_space-other_T2star_gmlabel-SC_seg.json index 3e830bf0db..58d47c5ed2 100644 --- a/derivatives/labels/sub-stanford06/anat/sub-stanford06_space-other_T2star_gmlabel-SC_seg.json +++ b/derivatives/labels/sub-stanford06/anat/sub-stanford06_space-other_T2star_gmlabel-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-03 10:35:23" + "Date": "2021-06-03 10:35:23", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-stanford06/anat/sub-stanford06_space-other_T2star_label-SC_seg.json b/derivatives/labels/sub-stanford06/anat/sub-stanford06_space-other_T2star_label-SC_seg.json index e6b6ec395d..37e502641c 100644 --- a/derivatives/labels/sub-stanford06/anat/sub-stanford06_space-other_T2star_label-SC_seg.json +++ b/derivatives/labels/sub-stanford06/anat/sub-stanford06_space-other_T2star_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-07-07 16:14:18" + "Date": "2021-07-07 16:14:18", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-stanford06/anat/sub-stanford06_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-stanford06/anat/sub-stanford06_space-other_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-stanford06/anat/sub-stanford06_space-other_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-stanford06/anat/sub-stanford06_space-other_T2w_label-SC_seg.json b/derivatives/labels/sub-stanford06/anat/sub-stanford06_space-other_T2w_label-SC_seg.json index f1d8609e95..e82528dfd4 100644 --- a/derivatives/labels/sub-stanford06/anat/sub-stanford06_space-other_T2w_label-SC_seg.json +++ b/derivatives/labels/sub-stanford06/anat/sub-stanford06_space-other_T2w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Yassine El Bouchaibi", - "Date": "2021-07-02 14:46:56" + "Date": "2021-07-02 14:46:56", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-stanford06/dwi/sub-stanford06_rec-average_dwi_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-stanford06/dwi/sub-stanford06_rec-average_dwi_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-stanford06/dwi/sub-stanford06_rec-average_dwi_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-strasbourg01/anat/sub-strasbourg01_flip-1_mt-on_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-strasbourg01/anat/sub-strasbourg01_flip-1_mt-on_space-other_MTS_label-SC_seg.json index dafb8d8cbe..df5aa0c546 100644 --- a/derivatives/labels/sub-strasbourg01/anat/sub-strasbourg01_flip-1_mt-on_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-strasbourg01/anat/sub-strasbourg01_flip-1_mt-on_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:18" + "Date": "2021-06-08 15:06:18", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-strasbourg01/anat/sub-strasbourg01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-strasbourg01/anat/sub-strasbourg01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-strasbourg01/anat/sub-strasbourg01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-strasbourg01/anat/sub-strasbourg01_flip-2_mt-off_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-strasbourg01/anat/sub-strasbourg01_flip-2_mt-off_space-other_MTS_label-SC_seg.json index 6e2bd03e2f..4e592aed35 100644 --- a/derivatives/labels/sub-strasbourg01/anat/sub-strasbourg01_flip-2_mt-off_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-strasbourg01/anat/sub-strasbourg01_flip-2_mt-off_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-03 10:35:19" + "Date": "2021-06-03 10:35:19", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-strasbourg01/anat/sub-strasbourg01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-strasbourg01/anat/sub-strasbourg01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-strasbourg01/anat/sub-strasbourg01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-strasbourg01/anat/sub-strasbourg01_space-other_T1w_label-SC_seg.json b/derivatives/labels/sub-strasbourg01/anat/sub-strasbourg01_space-other_T1w_label-SC_seg.json index dcc049c277..de19a0f60e 100644 --- a/derivatives/labels/sub-strasbourg01/anat/sub-strasbourg01_space-other_T1w_label-SC_seg.json +++ b/derivatives/labels/sub-strasbourg01/anat/sub-strasbourg01_space-other_T1w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Yassine El Bouchaibi", - "Date": "2021-07-02 15:12:01" + "Date": "2021-07-02 15:12:01", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-strasbourg01/anat/sub-strasbourg01_space-other_T2star_label-SC_seg.json b/derivatives/labels/sub-strasbourg01/anat/sub-strasbourg01_space-other_T2star_label-SC_seg.json index dafb8d8cbe..28da659c0f 100644 --- a/derivatives/labels/sub-strasbourg01/anat/sub-strasbourg01_space-other_T2star_label-SC_seg.json +++ b/derivatives/labels/sub-strasbourg01/anat/sub-strasbourg01_space-other_T2star_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:18" + "Date": "2021-06-08 15:06:18", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-strasbourg01/anat/sub-strasbourg01_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-strasbourg01/anat/sub-strasbourg01_space-other_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-strasbourg01/anat/sub-strasbourg01_space-other_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-strasbourg01/anat/sub-strasbourg01_space-other_T2w_label-SC_seg.json b/derivatives/labels/sub-strasbourg01/anat/sub-strasbourg01_space-other_T2w_label-SC_seg.json index dafb8d8cbe..f958114723 100644 --- a/derivatives/labels/sub-strasbourg01/anat/sub-strasbourg01_space-other_T2w_label-SC_seg.json +++ b/derivatives/labels/sub-strasbourg01/anat/sub-strasbourg01_space-other_T2w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:18" + "Date": "2021-06-08 15:06:18", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-strasbourg01/dwi/sub-strasbourg01_rec-average_dwi_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-strasbourg01/dwi/sub-strasbourg01_rec-average_dwi_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-strasbourg01/dwi/sub-strasbourg01_rec-average_dwi_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-strasbourg02/anat/sub-strasbourg02_flip-1_mt-on_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-strasbourg02/anat/sub-strasbourg02_flip-1_mt-on_space-other_MTS_label-SC_seg.json index 1e04cf2da3..d45243e904 100644 --- a/derivatives/labels/sub-strasbourg02/anat/sub-strasbourg02_flip-1_mt-on_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-strasbourg02/anat/sub-strasbourg02_flip-1_mt-on_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Etienne Bergeron", - "Date": "2021-06-30 14:44:31" + "Date": "2021-06-30 14:44:31", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-strasbourg02/anat/sub-strasbourg02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-strasbourg02/anat/sub-strasbourg02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-strasbourg02/anat/sub-strasbourg02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-strasbourg02/anat/sub-strasbourg02_flip-2_mt-off_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-strasbourg02/anat/sub-strasbourg02_flip-2_mt-off_space-other_MTS_label-SC_seg.json index 7ccb33123f..6975f3838c 100644 --- a/derivatives/labels/sub-strasbourg02/anat/sub-strasbourg02_flip-2_mt-off_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-strasbourg02/anat/sub-strasbourg02_flip-2_mt-off_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Yassine El Bouchaibi", - "Date": "2021-07-05 19:30:19" + "Date": "2021-07-05 19:30:19", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-strasbourg02/anat/sub-strasbourg02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-strasbourg02/anat/sub-strasbourg02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-strasbourg02/anat/sub-strasbourg02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-strasbourg02/anat/sub-strasbourg02_space-other_T1w_label-SC_seg.json b/derivatives/labels/sub-strasbourg02/anat/sub-strasbourg02_space-other_T1w_label-SC_seg.json index e043a9e01c..f988de558f 100644 --- a/derivatives/labels/sub-strasbourg02/anat/sub-strasbourg02_space-other_T1w_label-SC_seg.json +++ b/derivatives/labels/sub-strasbourg02/anat/sub-strasbourg02_space-other_T1w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Yassine El Bouchaibi", - "Date": "2021-07-02 15:13:59" + "Date": "2021-07-02 15:13:59", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-strasbourg02/anat/sub-strasbourg02_space-other_T2star_label-SC_seg.json b/derivatives/labels/sub-strasbourg02/anat/sub-strasbourg02_space-other_T2star_label-SC_seg.json index dafb8d8cbe..28da659c0f 100644 --- a/derivatives/labels/sub-strasbourg02/anat/sub-strasbourg02_space-other_T2star_label-SC_seg.json +++ b/derivatives/labels/sub-strasbourg02/anat/sub-strasbourg02_space-other_T2star_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:18" + "Date": "2021-06-08 15:06:18", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-strasbourg02/anat/sub-strasbourg02_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-strasbourg02/anat/sub-strasbourg02_space-other_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-strasbourg02/anat/sub-strasbourg02_space-other_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-strasbourg02/anat/sub-strasbourg02_space-other_T2w_label-SC_seg.json b/derivatives/labels/sub-strasbourg02/anat/sub-strasbourg02_space-other_T2w_label-SC_seg.json index b11c7aa02d..f7f919be5e 100644 --- a/derivatives/labels/sub-strasbourg02/anat/sub-strasbourg02_space-other_T2w_label-SC_seg.json +++ b/derivatives/labels/sub-strasbourg02/anat/sub-strasbourg02_space-other_T2w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Yassine El Bouchaibi", - "Date": "2021-07-02 16:05:24" + "Date": "2021-07-02 16:05:24", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-strasbourg02/dwi/sub-strasbourg02_rec-average_dwi_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-strasbourg02/dwi/sub-strasbourg02_rec-average_dwi_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-strasbourg02/dwi/sub-strasbourg02_rec-average_dwi_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-strasbourg03/anat/sub-strasbourg03_flip-1_mt-on_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-strasbourg03/anat/sub-strasbourg03_flip-1_mt-on_space-other_MTS_label-SC_seg.json index dafb8d8cbe..df5aa0c546 100644 --- a/derivatives/labels/sub-strasbourg03/anat/sub-strasbourg03_flip-1_mt-on_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-strasbourg03/anat/sub-strasbourg03_flip-1_mt-on_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:18" + "Date": "2021-06-08 15:06:18", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-strasbourg03/anat/sub-strasbourg03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-strasbourg03/anat/sub-strasbourg03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-strasbourg03/anat/sub-strasbourg03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-strasbourg03/anat/sub-strasbourg03_flip-2_mt-off_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-strasbourg03/anat/sub-strasbourg03_flip-2_mt-off_space-other_MTS_label-SC_seg.json index dafb8d8cbe..df5aa0c546 100644 --- a/derivatives/labels/sub-strasbourg03/anat/sub-strasbourg03_flip-2_mt-off_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-strasbourg03/anat/sub-strasbourg03_flip-2_mt-off_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:18" + "Date": "2021-06-08 15:06:18", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-strasbourg03/anat/sub-strasbourg03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-strasbourg03/anat/sub-strasbourg03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-strasbourg03/anat/sub-strasbourg03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-strasbourg03/anat/sub-strasbourg03_space-other_T1w_label-SC_seg.json b/derivatives/labels/sub-strasbourg03/anat/sub-strasbourg03_space-other_T1w_label-SC_seg.json index 60d08288e2..64302e483d 100644 --- a/derivatives/labels/sub-strasbourg03/anat/sub-strasbourg03_space-other_T1w_label-SC_seg.json +++ b/derivatives/labels/sub-strasbourg03/anat/sub-strasbourg03_space-other_T1w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Yassine El Bouchaibi", - "Date": "2021-07-02 15:24:55" + "Date": "2021-07-02 15:24:55", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-strasbourg03/anat/sub-strasbourg03_space-other_T2star_label-SC_seg.json b/derivatives/labels/sub-strasbourg03/anat/sub-strasbourg03_space-other_T2star_label-SC_seg.json index dafb8d8cbe..28da659c0f 100644 --- a/derivatives/labels/sub-strasbourg03/anat/sub-strasbourg03_space-other_T2star_label-SC_seg.json +++ b/derivatives/labels/sub-strasbourg03/anat/sub-strasbourg03_space-other_T2star_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:18" + "Date": "2021-06-08 15:06:18", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-strasbourg03/anat/sub-strasbourg03_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-strasbourg03/anat/sub-strasbourg03_space-other_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-strasbourg03/anat/sub-strasbourg03_space-other_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-strasbourg03/anat/sub-strasbourg03_space-other_T2w_label-SC_seg.json b/derivatives/labels/sub-strasbourg03/anat/sub-strasbourg03_space-other_T2w_label-SC_seg.json index 24de37c815..d468096f15 100644 --- a/derivatives/labels/sub-strasbourg03/anat/sub-strasbourg03_space-other_T2w_label-SC_seg.json +++ b/derivatives/labels/sub-strasbourg03/anat/sub-strasbourg03_space-other_T2w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-07-07 16:27:12" + "Date": "2021-07-07 16:27:12", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-strasbourg03/dwi/sub-strasbourg03_rec-average_dwi_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-strasbourg03/dwi/sub-strasbourg03_rec-average_dwi_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-strasbourg03/dwi/sub-strasbourg03_rec-average_dwi_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-strasbourg04/anat/sub-strasbourg04_flip-1_mt-on_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-strasbourg04/anat/sub-strasbourg04_flip-1_mt-on_space-other_MTS_label-SC_seg.json index dafb8d8cbe..df5aa0c546 100644 --- a/derivatives/labels/sub-strasbourg04/anat/sub-strasbourg04_flip-1_mt-on_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-strasbourg04/anat/sub-strasbourg04_flip-1_mt-on_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:18" + "Date": "2021-06-08 15:06:18", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-strasbourg04/anat/sub-strasbourg04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-strasbourg04/anat/sub-strasbourg04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-strasbourg04/anat/sub-strasbourg04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-strasbourg04/anat/sub-strasbourg04_flip-2_mt-off_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-strasbourg04/anat/sub-strasbourg04_flip-2_mt-off_space-other_MTS_label-SC_seg.json index fe67440886..a0df22aed5 100644 --- a/derivatives/labels/sub-strasbourg04/anat/sub-strasbourg04_flip-2_mt-off_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-strasbourg04/anat/sub-strasbourg04_flip-2_mt-off_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-07-07 16:27:44" + "Date": "2021-07-07 16:27:44", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-strasbourg04/anat/sub-strasbourg04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-strasbourg04/anat/sub-strasbourg04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-strasbourg04/anat/sub-strasbourg04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-strasbourg04/anat/sub-strasbourg04_space-other_T1w_label-SC_seg.json b/derivatives/labels/sub-strasbourg04/anat/sub-strasbourg04_space-other_T1w_label-SC_seg.json index b9802747cc..873d32e219 100644 --- a/derivatives/labels/sub-strasbourg04/anat/sub-strasbourg04_space-other_T1w_label-SC_seg.json +++ b/derivatives/labels/sub-strasbourg04/anat/sub-strasbourg04_space-other_T1w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Yassine El Bouchaibi", - "Date": "2021-07-02 15:15:55" + "Date": "2021-07-02 15:15:55", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-strasbourg04/anat/sub-strasbourg04_space-other_T2star_label-SC_seg.json b/derivatives/labels/sub-strasbourg04/anat/sub-strasbourg04_space-other_T2star_label-SC_seg.json index dafb8d8cbe..28da659c0f 100644 --- a/derivatives/labels/sub-strasbourg04/anat/sub-strasbourg04_space-other_T2star_label-SC_seg.json +++ b/derivatives/labels/sub-strasbourg04/anat/sub-strasbourg04_space-other_T2star_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:18" + "Date": "2021-06-08 15:06:18", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-strasbourg04/anat/sub-strasbourg04_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-strasbourg04/anat/sub-strasbourg04_space-other_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-strasbourg04/anat/sub-strasbourg04_space-other_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-strasbourg04/anat/sub-strasbourg04_space-other_T2w_label-SC_seg.json b/derivatives/labels/sub-strasbourg04/anat/sub-strasbourg04_space-other_T2w_label-SC_seg.json index e591f87506..cfc8439f22 100644 --- a/derivatives/labels/sub-strasbourg04/anat/sub-strasbourg04_space-other_T2w_label-SC_seg.json +++ b/derivatives/labels/sub-strasbourg04/anat/sub-strasbourg04_space-other_T2w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-07-07 16:23:42" + "Date": "2021-07-07 16:23:42", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-strasbourg04/dwi/sub-strasbourg04_rec-average_dwi_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-strasbourg04/dwi/sub-strasbourg04_rec-average_dwi_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-strasbourg04/dwi/sub-strasbourg04_rec-average_dwi_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-strasbourg05/anat/sub-strasbourg05_flip-1_mt-on_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-strasbourg05/anat/sub-strasbourg05_flip-1_mt-on_space-other_MTS_label-SC_seg.json index dafb8d8cbe..df5aa0c546 100644 --- a/derivatives/labels/sub-strasbourg05/anat/sub-strasbourg05_flip-1_mt-on_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-strasbourg05/anat/sub-strasbourg05_flip-1_mt-on_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:18" + "Date": "2021-06-08 15:06:18", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-strasbourg05/anat/sub-strasbourg05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-strasbourg05/anat/sub-strasbourg05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-strasbourg05/anat/sub-strasbourg05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-strasbourg05/anat/sub-strasbourg05_flip-2_mt-off_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-strasbourg05/anat/sub-strasbourg05_flip-2_mt-off_space-other_MTS_label-SC_seg.json index dafb8d8cbe..df5aa0c546 100644 --- a/derivatives/labels/sub-strasbourg05/anat/sub-strasbourg05_flip-2_mt-off_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-strasbourg05/anat/sub-strasbourg05_flip-2_mt-off_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:18" + "Date": "2021-06-08 15:06:18", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-strasbourg05/anat/sub-strasbourg05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-strasbourg05/anat/sub-strasbourg05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-strasbourg05/anat/sub-strasbourg05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-strasbourg05/anat/sub-strasbourg05_space-other_T1w_label-SC_seg.json b/derivatives/labels/sub-strasbourg05/anat/sub-strasbourg05_space-other_T1w_label-SC_seg.json index 4b3ae5b7d6..9bead8769e 100644 --- a/derivatives/labels/sub-strasbourg05/anat/sub-strasbourg05_space-other_T1w_label-SC_seg.json +++ b/derivatives/labels/sub-strasbourg05/anat/sub-strasbourg05_space-other_T1w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Yassine El Bouchaibi", - "Date": "2021-07-02 15:23:20" + "Date": "2021-07-02 15:23:20", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-strasbourg05/anat/sub-strasbourg05_space-other_T2star_label-SC_seg.json b/derivatives/labels/sub-strasbourg05/anat/sub-strasbourg05_space-other_T2star_label-SC_seg.json index dafb8d8cbe..28da659c0f 100644 --- a/derivatives/labels/sub-strasbourg05/anat/sub-strasbourg05_space-other_T2star_label-SC_seg.json +++ b/derivatives/labels/sub-strasbourg05/anat/sub-strasbourg05_space-other_T2star_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:18" + "Date": "2021-06-08 15:06:18", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-strasbourg05/anat/sub-strasbourg05_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-strasbourg05/anat/sub-strasbourg05_space-other_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-strasbourg05/anat/sub-strasbourg05_space-other_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-strasbourg05/anat/sub-strasbourg05_space-other_T2w_label-SC_seg.json b/derivatives/labels/sub-strasbourg05/anat/sub-strasbourg05_space-other_T2w_label-SC_seg.json index 563783db9f..5fdfda1caa 100644 --- a/derivatives/labels/sub-strasbourg05/anat/sub-strasbourg05_space-other_T2w_label-SC_seg.json +++ b/derivatives/labels/sub-strasbourg05/anat/sub-strasbourg05_space-other_T2w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Paul Bautin", - "Date": "2020-07-29 15:47:58" + "Date": "2020-07-29 15:47:58", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-strasbourg05/dwi/sub-strasbourg05_rec-average_dwi_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-strasbourg05/dwi/sub-strasbourg05_rec-average_dwi_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-strasbourg05/dwi/sub-strasbourg05_rec-average_dwi_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-strasbourg06/anat/sub-strasbourg06_flip-1_mt-on_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-strasbourg06/anat/sub-strasbourg06_flip-1_mt-on_space-other_MTS_label-SC_seg.json index b04208fe40..5583b67909 100644 --- a/derivatives/labels/sub-strasbourg06/anat/sub-strasbourg06_flip-1_mt-on_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-strasbourg06/anat/sub-strasbourg06_flip-1_mt-on_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Etienne Bergeron", - "Date": "2021-06-30 14:45:24" + "Date": "2021-06-30 14:45:24", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-strasbourg06/anat/sub-strasbourg06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-strasbourg06/anat/sub-strasbourg06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-strasbourg06/anat/sub-strasbourg06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-strasbourg06/anat/sub-strasbourg06_flip-2_mt-off_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-strasbourg06/anat/sub-strasbourg06_flip-2_mt-off_space-other_MTS_label-SC_seg.json index 54e584d997..c80b298745 100644 --- a/derivatives/labels/sub-strasbourg06/anat/sub-strasbourg06_flip-2_mt-off_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-strasbourg06/anat/sub-strasbourg06_flip-2_mt-off_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-07-07 16:35:06" + "Date": "2021-07-07 16:35:06", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-strasbourg06/anat/sub-strasbourg06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-strasbourg06/anat/sub-strasbourg06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-strasbourg06/anat/sub-strasbourg06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-strasbourg06/anat/sub-strasbourg06_space-other_T1w_label-SC_seg.json b/derivatives/labels/sub-strasbourg06/anat/sub-strasbourg06_space-other_T1w_label-SC_seg.json index 53cea1b876..31d0b71cff 100644 --- a/derivatives/labels/sub-strasbourg06/anat/sub-strasbourg06_space-other_T1w_label-SC_seg.json +++ b/derivatives/labels/sub-strasbourg06/anat/sub-strasbourg06_space-other_T1w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Yassine El Bouchaibi", - "Date": "2021-07-02 15:29:49" + "Date": "2021-07-02 15:29:49", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-strasbourg06/anat/sub-strasbourg06_space-other_T2star_label-SC_seg.json b/derivatives/labels/sub-strasbourg06/anat/sub-strasbourg06_space-other_T2star_label-SC_seg.json index dafb8d8cbe..28da659c0f 100644 --- a/derivatives/labels/sub-strasbourg06/anat/sub-strasbourg06_space-other_T2star_label-SC_seg.json +++ b/derivatives/labels/sub-strasbourg06/anat/sub-strasbourg06_space-other_T2star_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:18" + "Date": "2021-06-08 15:06:18", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-strasbourg06/anat/sub-strasbourg06_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-strasbourg06/anat/sub-strasbourg06_space-other_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-strasbourg06/anat/sub-strasbourg06_space-other_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-strasbourg06/anat/sub-strasbourg06_space-other_T2w_label-SC_seg.json b/derivatives/labels/sub-strasbourg06/anat/sub-strasbourg06_space-other_T2w_label-SC_seg.json index 8d84a8a220..d88d2d2379 100644 --- a/derivatives/labels/sub-strasbourg06/anat/sub-strasbourg06_space-other_T2w_label-SC_seg.json +++ b/derivatives/labels/sub-strasbourg06/anat/sub-strasbourg06_space-other_T2w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Yassine El Bouchaibi", - "Date": "2021-07-05 17:19:32" + "Date": "2021-07-05 17:19:32", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-strasbourg06/dwi/sub-strasbourg06_rec-average_dwi_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-strasbourg06/dwi/sub-strasbourg06_rec-average_dwi_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-strasbourg06/dwi/sub-strasbourg06_rec-average_dwi_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-tehranS01/anat/sub-tehranS01_flip-1_mt-on_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-tehranS01/anat/sub-tehranS01_flip-1_mt-on_space-other_MTS_label-SC_seg.json index 9d7e057999..348b465d4d 100644 --- a/derivatives/labels/sub-tehranS01/anat/sub-tehranS01_flip-1_mt-on_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-tehranS01/anat/sub-tehranS01_flip-1_mt-on_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Etienne Bergeron", - "Date": "2021-06-30 14:42:32" + "Date": "2021-06-30 14:42:32", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-tehranS01/anat/sub-tehranS01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-tehranS01/anat/sub-tehranS01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-tehranS01/anat/sub-tehranS01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-tehranS01/anat/sub-tehranS01_flip-2_mt-off_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-tehranS01/anat/sub-tehranS01_flip-2_mt-off_space-other_MTS_label-SC_seg.json index 08d2956080..edb642f2da 100644 --- a/derivatives/labels/sub-tehranS01/anat/sub-tehranS01_flip-2_mt-off_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-tehranS01/anat/sub-tehranS01_flip-2_mt-off_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-06 10:43:57" + "Date": "2022-10-06 10:43:57", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-tehranS01/anat/sub-tehranS01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-tehranS01/anat/sub-tehranS01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-tehranS01/anat/sub-tehranS01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-tehranS01/anat/sub-tehranS01_space-other_T1w_label-SC_seg.json b/derivatives/labels/sub-tehranS01/anat/sub-tehranS01_space-other_T1w_label-SC_seg.json index dafb8d8cbe..ab471fe426 100644 --- a/derivatives/labels/sub-tehranS01/anat/sub-tehranS01_space-other_T1w_label-SC_seg.json +++ b/derivatives/labels/sub-tehranS01/anat/sub-tehranS01_space-other_T1w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:18" + "Date": "2021-06-08 15:06:18", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-tehranS01/anat/sub-tehranS01_space-other_T2star_label-SC_seg.json b/derivatives/labels/sub-tehranS01/anat/sub-tehranS01_space-other_T2star_label-SC_seg.json index e967576c8c..9147588297 100644 --- a/derivatives/labels/sub-tehranS01/anat/sub-tehranS01_space-other_T2star_label-SC_seg.json +++ b/derivatives/labels/sub-tehranS01/anat/sub-tehranS01_space-other_T2star_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:19" + "Date": "2021-06-08 15:06:19", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-tehranS01/anat/sub-tehranS01_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-tehranS01/anat/sub-tehranS01_space-other_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-tehranS01/anat/sub-tehranS01_space-other_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-tehranS01/anat/sub-tehranS01_space-other_T2w_label-SC_seg.json b/derivatives/labels/sub-tehranS01/anat/sub-tehranS01_space-other_T2w_label-SC_seg.json index e967576c8c..a3b7a43831 100644 --- a/derivatives/labels/sub-tehranS01/anat/sub-tehranS01_space-other_T2w_label-SC_seg.json +++ b/derivatives/labels/sub-tehranS01/anat/sub-tehranS01_space-other_T2w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:19" + "Date": "2021-06-08 15:06:19", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-tehranS01/dwi/sub-tehranS01_rec-average_dwi_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-tehranS01/dwi/sub-tehranS01_rec-average_dwi_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-tehranS01/dwi/sub-tehranS01_rec-average_dwi_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-tehranS02/anat/sub-tehranS02_flip-1_mt-on_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-tehranS02/anat/sub-tehranS02_flip-1_mt-on_space-other_MTS_label-SC_seg.json index e967576c8c..2224e41f6c 100644 --- a/derivatives/labels/sub-tehranS02/anat/sub-tehranS02_flip-1_mt-on_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-tehranS02/anat/sub-tehranS02_flip-1_mt-on_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:19" + "Date": "2021-06-08 15:06:19", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-tehranS02/anat/sub-tehranS02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-tehranS02/anat/sub-tehranS02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-tehranS02/anat/sub-tehranS02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-tehranS02/anat/sub-tehranS02_flip-2_mt-off_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-tehranS02/anat/sub-tehranS02_flip-2_mt-off_space-other_MTS_label-SC_seg.json index 7eb9adba9f..2407d8a717 100644 --- a/derivatives/labels/sub-tehranS02/anat/sub-tehranS02_flip-2_mt-off_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-tehranS02/anat/sub-tehranS02_flip-2_mt-off_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Yassine El Bouchaibi", - "Date": "2021-07-05 19:55:17" + "Date": "2021-07-05 19:55:17", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-tehranS02/anat/sub-tehranS02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-tehranS02/anat/sub-tehranS02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-tehranS02/anat/sub-tehranS02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-tehranS02/anat/sub-tehranS02_space-other_T1w_label-SC_seg.json b/derivatives/labels/sub-tehranS02/anat/sub-tehranS02_space-other_T1w_label-SC_seg.json index b6e7e0a5d5..df2f1aa153 100644 --- a/derivatives/labels/sub-tehranS02/anat/sub-tehranS02_space-other_T1w_label-SC_seg.json +++ b/derivatives/labels/sub-tehranS02/anat/sub-tehranS02_space-other_T1w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Yassine El Bouchaibi", - "Date": "2021-07-02 15:50:31" + "Date": "2021-07-02 15:50:31", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-tehranS02/anat/sub-tehranS02_space-other_T2star_label-SC_seg.json b/derivatives/labels/sub-tehranS02/anat/sub-tehranS02_space-other_T2star_label-SC_seg.json index e967576c8c..9147588297 100644 --- a/derivatives/labels/sub-tehranS02/anat/sub-tehranS02_space-other_T2star_label-SC_seg.json +++ b/derivatives/labels/sub-tehranS02/anat/sub-tehranS02_space-other_T2star_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:19" + "Date": "2021-06-08 15:06:19", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-tehranS02/anat/sub-tehranS02_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-tehranS02/anat/sub-tehranS02_space-other_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-tehranS02/anat/sub-tehranS02_space-other_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-tehranS02/anat/sub-tehranS02_space-other_T2w_label-SC_seg.json b/derivatives/labels/sub-tehranS02/anat/sub-tehranS02_space-other_T2w_label-SC_seg.json index 78043dac0c..e371736dd2 100644 --- a/derivatives/labels/sub-tehranS02/anat/sub-tehranS02_space-other_T2w_label-SC_seg.json +++ b/derivatives/labels/sub-tehranS02/anat/sub-tehranS02_space-other_T2w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Yassine El Bouchaibi", - "Date": "2021-07-05 19:26:08" + "Date": "2021-07-05 19:26:08", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-tehranS02/dwi/sub-tehranS02_rec-average_dwi_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-tehranS02/dwi/sub-tehranS02_rec-average_dwi_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-tehranS02/dwi/sub-tehranS02_rec-average_dwi_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-tehranS03/anat/sub-tehranS03_flip-1_mt-on_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-tehranS03/anat/sub-tehranS03_flip-1_mt-on_space-other_MTS_label-SC_seg.json index e967576c8c..2224e41f6c 100644 --- a/derivatives/labels/sub-tehranS03/anat/sub-tehranS03_flip-1_mt-on_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-tehranS03/anat/sub-tehranS03_flip-1_mt-on_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:19" + "Date": "2021-06-08 15:06:19", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-tehranS03/anat/sub-tehranS03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-tehranS03/anat/sub-tehranS03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-tehranS03/anat/sub-tehranS03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-tehranS03/anat/sub-tehranS03_flip-2_mt-off_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-tehranS03/anat/sub-tehranS03_flip-2_mt-off_space-other_MTS_label-SC_seg.json index e4fdfd5cf3..7a51e3e30a 100644 --- a/derivatives/labels/sub-tehranS03/anat/sub-tehranS03_flip-2_mt-off_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-tehranS03/anat/sub-tehranS03_flip-2_mt-off_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Yassine El Bouchaibi", - "Date": "2021-07-05 19:51:41" + "Date": "2021-07-05 19:51:41", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-tehranS03/anat/sub-tehranS03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-tehranS03/anat/sub-tehranS03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-tehranS03/anat/sub-tehranS03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-tehranS03/anat/sub-tehranS03_space-other_T1w_label-SC_seg.json b/derivatives/labels/sub-tehranS03/anat/sub-tehranS03_space-other_T1w_label-SC_seg.json index 47b6893d75..e212046c76 100644 --- a/derivatives/labels/sub-tehranS03/anat/sub-tehranS03_space-other_T1w_label-SC_seg.json +++ b/derivatives/labels/sub-tehranS03/anat/sub-tehranS03_space-other_T1w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Yassine El Bouchaibi", - "Date": "2021-07-02 15:28:24" + "Date": "2021-07-02 15:28:24", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-tehranS03/anat/sub-tehranS03_space-other_T2star_label-SC_seg.json b/derivatives/labels/sub-tehranS03/anat/sub-tehranS03_space-other_T2star_label-SC_seg.json index e967576c8c..9147588297 100644 --- a/derivatives/labels/sub-tehranS03/anat/sub-tehranS03_space-other_T2star_label-SC_seg.json +++ b/derivatives/labels/sub-tehranS03/anat/sub-tehranS03_space-other_T2star_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:19" + "Date": "2021-06-08 15:06:19", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-tehranS03/anat/sub-tehranS03_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-tehranS03/anat/sub-tehranS03_space-other_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-tehranS03/anat/sub-tehranS03_space-other_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-tehranS03/anat/sub-tehranS03_space-other_T2w_label-SC_seg.json b/derivatives/labels/sub-tehranS03/anat/sub-tehranS03_space-other_T2w_label-SC_seg.json index 3c10f88d8f..481a5bab82 100644 --- a/derivatives/labels/sub-tehranS03/anat/sub-tehranS03_space-other_T2w_label-SC_seg.json +++ b/derivatives/labels/sub-tehranS03/anat/sub-tehranS03_space-other_T2w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Yassine El Bouchaibi", - "Date": "2021-07-05 18:27:34" + "Date": "2021-07-05 18:27:34", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-tehranS03/dwi/sub-tehranS03_rec-average_dwi_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-tehranS03/dwi/sub-tehranS03_rec-average_dwi_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-tehranS03/dwi/sub-tehranS03_rec-average_dwi_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-tehranS04/anat/sub-tehranS04_flip-1_mt-on_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-tehranS04/anat/sub-tehranS04_flip-1_mt-on_space-other_MTS_label-SC_seg.json index e967576c8c..2224e41f6c 100644 --- a/derivatives/labels/sub-tehranS04/anat/sub-tehranS04_flip-1_mt-on_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-tehranS04/anat/sub-tehranS04_flip-1_mt-on_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:19" + "Date": "2021-06-08 15:06:19", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-tehranS04/anat/sub-tehranS04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-tehranS04/anat/sub-tehranS04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-tehranS04/anat/sub-tehranS04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-tehranS04/anat/sub-tehranS04_flip-2_mt-off_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-tehranS04/anat/sub-tehranS04_flip-2_mt-off_space-other_MTS_label-SC_seg.json index e967576c8c..2224e41f6c 100644 --- a/derivatives/labels/sub-tehranS04/anat/sub-tehranS04_flip-2_mt-off_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-tehranS04/anat/sub-tehranS04_flip-2_mt-off_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:19" + "Date": "2021-06-08 15:06:19", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-tehranS04/anat/sub-tehranS04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-tehranS04/anat/sub-tehranS04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-tehranS04/anat/sub-tehranS04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-tehranS04/anat/sub-tehranS04_space-other_T1w_label-SC_seg.json b/derivatives/labels/sub-tehranS04/anat/sub-tehranS04_space-other_T1w_label-SC_seg.json index 83db785e2f..d0a31f0a1e 100644 --- a/derivatives/labels/sub-tehranS04/anat/sub-tehranS04_space-other_T1w_label-SC_seg.json +++ b/derivatives/labels/sub-tehranS04/anat/sub-tehranS04_space-other_T1w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Yassine El Bouchaibi", - "Date": "2021-07-02 15:27:09" + "Date": "2021-07-02 15:27:09", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-tehranS04/anat/sub-tehranS04_space-other_T2star_label-SC_seg.json b/derivatives/labels/sub-tehranS04/anat/sub-tehranS04_space-other_T2star_label-SC_seg.json index e967576c8c..9147588297 100644 --- a/derivatives/labels/sub-tehranS04/anat/sub-tehranS04_space-other_T2star_label-SC_seg.json +++ b/derivatives/labels/sub-tehranS04/anat/sub-tehranS04_space-other_T2star_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:19" + "Date": "2021-06-08 15:06:19", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-tehranS04/anat/sub-tehranS04_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-tehranS04/anat/sub-tehranS04_space-other_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-tehranS04/anat/sub-tehranS04_space-other_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-tehranS04/anat/sub-tehranS04_space-other_T2w_label-SC_seg.json b/derivatives/labels/sub-tehranS04/anat/sub-tehranS04_space-other_T2w_label-SC_seg.json index b34433c844..4f575ba9b4 100644 --- a/derivatives/labels/sub-tehranS04/anat/sub-tehranS04_space-other_T2w_label-SC_seg.json +++ b/derivatives/labels/sub-tehranS04/anat/sub-tehranS04_space-other_T2w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Yassine El Bouchaibi", - "Date": "2021-07-05 17:53:41" + "Date": "2021-07-05 17:53:41", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-tehranS04/dwi/sub-tehranS04_rec-average_dwi_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-tehranS04/dwi/sub-tehranS04_rec-average_dwi_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-tehranS04/dwi/sub-tehranS04_rec-average_dwi_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-tehranS05/anat/sub-tehranS05_flip-1_mt-on_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-tehranS05/anat/sub-tehranS05_flip-1_mt-on_space-other_MTS_label-SC_seg.json index d33327090a..70f4a78795 100644 --- a/derivatives/labels/sub-tehranS05/anat/sub-tehranS05_flip-1_mt-on_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-tehranS05/anat/sub-tehranS05_flip-1_mt-on_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Etienne Bergeron", - "Date": "2021-06-30 14:51:58" + "Date": "2021-06-30 14:51:58", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-tehranS05/anat/sub-tehranS05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-tehranS05/anat/sub-tehranS05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-tehranS05/anat/sub-tehranS05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-tehranS05/anat/sub-tehranS05_flip-2_mt-off_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-tehranS05/anat/sub-tehranS05_flip-2_mt-off_space-other_MTS_label-SC_seg.json index e967576c8c..2224e41f6c 100644 --- a/derivatives/labels/sub-tehranS05/anat/sub-tehranS05_flip-2_mt-off_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-tehranS05/anat/sub-tehranS05_flip-2_mt-off_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:19" + "Date": "2021-06-08 15:06:19", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-tehranS05/anat/sub-tehranS05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-tehranS05/anat/sub-tehranS05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-tehranS05/anat/sub-tehranS05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-tehranS05/anat/sub-tehranS05_space-other_T1w_label-SC_seg.json b/derivatives/labels/sub-tehranS05/anat/sub-tehranS05_space-other_T1w_label-SC_seg.json index 9637685bbc..7ac456fa63 100644 --- a/derivatives/labels/sub-tehranS05/anat/sub-tehranS05_space-other_T1w_label-SC_seg.json +++ b/derivatives/labels/sub-tehranS05/anat/sub-tehranS05_space-other_T1w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Yassine El Bouchaibi", - "Date": "2021-07-02 15:45:30" + "Date": "2021-07-02 15:45:30", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-tehranS05/anat/sub-tehranS05_space-other_T2star_label-SC_seg.json b/derivatives/labels/sub-tehranS05/anat/sub-tehranS05_space-other_T2star_label-SC_seg.json index e967576c8c..9147588297 100644 --- a/derivatives/labels/sub-tehranS05/anat/sub-tehranS05_space-other_T2star_label-SC_seg.json +++ b/derivatives/labels/sub-tehranS05/anat/sub-tehranS05_space-other_T2star_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:19" + "Date": "2021-06-08 15:06:19", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-tehranS05/anat/sub-tehranS05_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-tehranS05/anat/sub-tehranS05_space-other_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-tehranS05/anat/sub-tehranS05_space-other_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-tehranS05/anat/sub-tehranS05_space-other_T2w_label-SC_seg.json b/derivatives/labels/sub-tehranS05/anat/sub-tehranS05_space-other_T2w_label-SC_seg.json index de5902fe4a..9db0634785 100644 --- a/derivatives/labels/sub-tehranS05/anat/sub-tehranS05_space-other_T2w_label-SC_seg.json +++ b/derivatives/labels/sub-tehranS05/anat/sub-tehranS05_space-other_T2w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Yassine El Bouchaibi", - "Date": "2021-07-05 19:08:15" + "Date": "2021-07-05 19:08:15", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-tehranS05/dwi/sub-tehranS05_rec-average_dwi_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-tehranS05/dwi/sub-tehranS05_rec-average_dwi_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-tehranS05/dwi/sub-tehranS05_rec-average_dwi_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-tehranS06/anat/sub-tehranS06_flip-1_mt-on_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-tehranS06/anat/sub-tehranS06_flip-1_mt-on_space-other_MTS_label-SC_seg.json index e967576c8c..2224e41f6c 100644 --- a/derivatives/labels/sub-tehranS06/anat/sub-tehranS06_flip-1_mt-on_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-tehranS06/anat/sub-tehranS06_flip-1_mt-on_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:19" + "Date": "2021-06-08 15:06:19", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-tehranS06/anat/sub-tehranS06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-tehranS06/anat/sub-tehranS06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-tehranS06/anat/sub-tehranS06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-tehranS06/anat/sub-tehranS06_flip-2_mt-off_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-tehranS06/anat/sub-tehranS06_flip-2_mt-off_space-other_MTS_label-SC_seg.json index 9b7d222a7b..abc9c6a03d 100644 --- a/derivatives/labels/sub-tehranS06/anat/sub-tehranS06_flip-2_mt-off_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-tehranS06/anat/sub-tehranS06_flip-2_mt-off_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-06 10:44:49" + "Date": "2022-10-06 10:44:49", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-tehranS06/anat/sub-tehranS06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-tehranS06/anat/sub-tehranS06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-tehranS06/anat/sub-tehranS06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-tehranS06/anat/sub-tehranS06_space-other_T1w_label-SC_seg.json b/derivatives/labels/sub-tehranS06/anat/sub-tehranS06_space-other_T1w_label-SC_seg.json index 1e9e5c1866..f26896d509 100644 --- a/derivatives/labels/sub-tehranS06/anat/sub-tehranS06_space-other_T1w_label-SC_seg.json +++ b/derivatives/labels/sub-tehranS06/anat/sub-tehranS06_space-other_T1w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Yassine El Bouchaibi", - "Date": "2021-07-02 15:34:29" + "Date": "2021-07-02 15:34:29", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-tehranS06/anat/sub-tehranS06_space-other_T2star_label-SC_seg.json b/derivatives/labels/sub-tehranS06/anat/sub-tehranS06_space-other_T2star_label-SC_seg.json index 035b5793de..aa2e1e2d9d 100644 --- a/derivatives/labels/sub-tehranS06/anat/sub-tehranS06_space-other_T2star_label-SC_seg.json +++ b/derivatives/labels/sub-tehranS06/anat/sub-tehranS06_space-other_T2star_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Etienne Bergeron", - "Date": "2021-06-30 17:27:57" + "Date": "2021-06-30 17:27:57", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-tehranS06/anat/sub-tehranS06_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-tehranS06/anat/sub-tehranS06_space-other_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-tehranS06/anat/sub-tehranS06_space-other_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-tehranS06/anat/sub-tehranS06_space-other_T2w_label-SC_seg.json b/derivatives/labels/sub-tehranS06/anat/sub-tehranS06_space-other_T2w_label-SC_seg.json index 9350d4aeb9..38d35fff92 100644 --- a/derivatives/labels/sub-tehranS06/anat/sub-tehranS06_space-other_T2w_label-SC_seg.json +++ b/derivatives/labels/sub-tehranS06/anat/sub-tehranS06_space-other_T2w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Yassine El Bouchaibi", - "Date": "2021-07-05 19:22:57" + "Date": "2021-07-05 19:22:57", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-tehranS06/dwi/sub-tehranS06_rec-average_dwi_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-tehranS06/dwi/sub-tehranS06_rec-average_dwi_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-tehranS06/dwi/sub-tehranS06_rec-average_dwi_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-tokyo750w01/anat/sub-tokyo750w01_flip-1_mt-on_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-tokyo750w01/anat/sub-tokyo750w01_flip-1_mt-on_space-other_MTS_label-SC_seg.json index e0989c99b0..245209198b 100644 --- a/derivatives/labels/sub-tokyo750w01/anat/sub-tokyo750w01_flip-1_mt-on_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-tokyo750w01/anat/sub-tokyo750w01_flip-1_mt-on_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Etienne Bergeron", - "Date": "2021-06-30 17:31:54" + "Date": "2021-06-30 17:31:54", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-tokyo750w01/anat/sub-tokyo750w01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-tokyo750w01/anat/sub-tokyo750w01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-tokyo750w01/anat/sub-tokyo750w01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-tokyo750w01/anat/sub-tokyo750w01_flip-2_mt-off_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-tokyo750w01/anat/sub-tokyo750w01_flip-2_mt-off_space-other_MTS_label-SC_seg.json index d329092a29..e97df247e8 100644 --- a/derivatives/labels/sub-tokyo750w01/anat/sub-tokyo750w01_flip-2_mt-off_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-tokyo750w01/anat/sub-tokyo750w01_flip-2_mt-off_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-06 10:47:13" + "Date": "2022-10-06 10:47:13", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-tokyo750w01/anat/sub-tokyo750w01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-tokyo750w01/anat/sub-tokyo750w01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-tokyo750w01/anat/sub-tokyo750w01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-tokyo750w01/anat/sub-tokyo750w01_space-other_T1w_label-SC_seg.json b/derivatives/labels/sub-tokyo750w01/anat/sub-tokyo750w01_space-other_T1w_label-SC_seg.json index 670def5105..ee7e0a182b 100644 --- a/derivatives/labels/sub-tokyo750w01/anat/sub-tokyo750w01_space-other_T1w_label-SC_seg.json +++ b/derivatives/labels/sub-tokyo750w01/anat/sub-tokyo750w01_space-other_T1w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Yassine El Bouchaibi", - "Date": "2021-07-02 15:56:03" + "Date": "2021-07-02 15:56:03", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-tokyo750w01/anat/sub-tokyo750w01_space-other_T2star_label-SC_seg.json b/derivatives/labels/sub-tokyo750w01/anat/sub-tokyo750w01_space-other_T2star_label-SC_seg.json index 06a270c00a..14d51a2715 100644 --- a/derivatives/labels/sub-tokyo750w01/anat/sub-tokyo750w01_space-other_T2star_label-SC_seg.json +++ b/derivatives/labels/sub-tokyo750w01/anat/sub-tokyo750w01_space-other_T2star_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Etienne Bergeron", - "Date": "2021-06-30 17:53:01" + "Date": "2021-06-30 17:53:01", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-tokyo750w01/anat/sub-tokyo750w01_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-tokyo750w01/anat/sub-tokyo750w01_space-other_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-tokyo750w01/anat/sub-tokyo750w01_space-other_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-tokyo750w01/anat/sub-tokyo750w01_space-other_T2w_label-SC_seg.json b/derivatives/labels/sub-tokyo750w01/anat/sub-tokyo750w01_space-other_T2w_label-SC_seg.json index e967576c8c..a3b7a43831 100644 --- a/derivatives/labels/sub-tokyo750w01/anat/sub-tokyo750w01_space-other_T2w_label-SC_seg.json +++ b/derivatives/labels/sub-tokyo750w01/anat/sub-tokyo750w01_space-other_T2w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:19" + "Date": "2021-06-08 15:06:19", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-tokyo750w01/dwi/sub-tokyo750w01_rec-average_dwi_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-tokyo750w01/dwi/sub-tokyo750w01_rec-average_dwi_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-tokyo750w01/dwi/sub-tokyo750w01_rec-average_dwi_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-tokyo750w02/anat/sub-tokyo750w02_flip-1_mt-on_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-tokyo750w02/anat/sub-tokyo750w02_flip-1_mt-on_space-other_MTS_label-SC_seg.json index 16f895e688..b262391314 100644 --- a/derivatives/labels/sub-tokyo750w02/anat/sub-tokyo750w02_flip-1_mt-on_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-tokyo750w02/anat/sub-tokyo750w02_flip-1_mt-on_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Etienne Bergeron", - "Date": "2021-06-30 17:37:12" + "Date": "2021-06-30 17:37:12", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-tokyo750w02/anat/sub-tokyo750w02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-tokyo750w02/anat/sub-tokyo750w02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-tokyo750w02/anat/sub-tokyo750w02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-tokyo750w02/anat/sub-tokyo750w02_flip-2_mt-off_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-tokyo750w02/anat/sub-tokyo750w02_flip-2_mt-off_space-other_MTS_label-SC_seg.json index 2d5e6cb981..3bcfae0069 100644 --- a/derivatives/labels/sub-tokyo750w02/anat/sub-tokyo750w02_flip-2_mt-off_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-tokyo750w02/anat/sub-tokyo750w02_flip-2_mt-off_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-08-03 15:58:53" + "Date": "2021-08-03 15:58:53", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-tokyo750w02/anat/sub-tokyo750w02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-tokyo750w02/anat/sub-tokyo750w02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-tokyo750w02/anat/sub-tokyo750w02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-tokyo750w02/anat/sub-tokyo750w02_space-other_T1w_label-SC_seg.json b/derivatives/labels/sub-tokyo750w02/anat/sub-tokyo750w02_space-other_T1w_label-SC_seg.json index 3ab86c507c..9c15e07d24 100644 --- a/derivatives/labels/sub-tokyo750w02/anat/sub-tokyo750w02_space-other_T1w_label-SC_seg.json +++ b/derivatives/labels/sub-tokyo750w02/anat/sub-tokyo750w02_space-other_T1w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-08-03 15:52:16" + "Date": "2021-08-03 15:52:16", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-tokyo750w02/anat/sub-tokyo750w02_space-other_T2star_label-SC_seg.json b/derivatives/labels/sub-tokyo750w02/anat/sub-tokyo750w02_space-other_T2star_label-SC_seg.json index 8a2b925af7..8a0e1982f6 100644 --- a/derivatives/labels/sub-tokyo750w02/anat/sub-tokyo750w02_space-other_T2star_label-SC_seg.json +++ b/derivatives/labels/sub-tokyo750w02/anat/sub-tokyo750w02_space-other_T2star_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Etienne Bergeron", - "Date": "2021-07-02 10:28:14" + "Date": "2021-07-02 10:28:14", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-tokyo750w02/anat/sub-tokyo750w02_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-tokyo750w02/anat/sub-tokyo750w02_space-other_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-tokyo750w02/anat/sub-tokyo750w02_space-other_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-tokyo750w02/anat/sub-tokyo750w02_space-other_T2w_label-SC_seg.json b/derivatives/labels/sub-tokyo750w02/anat/sub-tokyo750w02_space-other_T2w_label-SC_seg.json index d67d76019f..4d765663d3 100644 --- a/derivatives/labels/sub-tokyo750w02/anat/sub-tokyo750w02_space-other_T2w_label-SC_seg.json +++ b/derivatives/labels/sub-tokyo750w02/anat/sub-tokyo750w02_space-other_T2w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Paul Bautin", - "Date": "2020-07-29 15:02:12" + "Date": "2020-07-29 15:02:12", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-tokyo750w02/dwi/sub-tokyo750w02_rec-average_dwi_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-tokyo750w02/dwi/sub-tokyo750w02_rec-average_dwi_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-tokyo750w02/dwi/sub-tokyo750w02_rec-average_dwi_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-tokyo750w03/anat/sub-tokyo750w03_flip-1_mt-on_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-tokyo750w03/anat/sub-tokyo750w03_flip-1_mt-on_space-other_MTS_label-SC_seg.json index 1786d3d7f1..c9a0d3b691 100644 --- a/derivatives/labels/sub-tokyo750w03/anat/sub-tokyo750w03_flip-1_mt-on_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-tokyo750w03/anat/sub-tokyo750w03_flip-1_mt-on_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Etienne Bergeron", - "Date": "2021-06-30 17:35:54" + "Date": "2021-06-30 17:35:54", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-tokyo750w03/anat/sub-tokyo750w03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-tokyo750w03/anat/sub-tokyo750w03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-tokyo750w03/anat/sub-tokyo750w03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-tokyo750w03/anat/sub-tokyo750w03_flip-2_mt-off_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-tokyo750w03/anat/sub-tokyo750w03_flip-2_mt-off_space-other_MTS_label-SC_seg.json index 8a8051675c..0bdd2536c1 100644 --- a/derivatives/labels/sub-tokyo750w03/anat/sub-tokyo750w03_flip-2_mt-off_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-tokyo750w03/anat/sub-tokyo750w03_flip-2_mt-off_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-07-07 09:27:40" + "Date": "2021-07-07 09:27:40", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-tokyo750w03/anat/sub-tokyo750w03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-tokyo750w03/anat/sub-tokyo750w03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-tokyo750w03/anat/sub-tokyo750w03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-tokyo750w03/anat/sub-tokyo750w03_space-other_T1w_label-SC_seg.json b/derivatives/labels/sub-tokyo750w03/anat/sub-tokyo750w03_space-other_T1w_label-SC_seg.json index 552b87d198..7b7a85addd 100644 --- a/derivatives/labels/sub-tokyo750w03/anat/sub-tokyo750w03_space-other_T1w_label-SC_seg.json +++ b/derivatives/labels/sub-tokyo750w03/anat/sub-tokyo750w03_space-other_T1w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-03 10:35:15" + "Date": "2021-06-03 10:35:15", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-tokyo750w03/anat/sub-tokyo750w03_space-other_T2star_label-SC_seg.json b/derivatives/labels/sub-tokyo750w03/anat/sub-tokyo750w03_space-other_T2star_label-SC_seg.json index e967576c8c..9147588297 100644 --- a/derivatives/labels/sub-tokyo750w03/anat/sub-tokyo750w03_space-other_T2star_label-SC_seg.json +++ b/derivatives/labels/sub-tokyo750w03/anat/sub-tokyo750w03_space-other_T2star_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:19" + "Date": "2021-06-08 15:06:19", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-tokyo750w03/anat/sub-tokyo750w03_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-tokyo750w03/anat/sub-tokyo750w03_space-other_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-tokyo750w03/anat/sub-tokyo750w03_space-other_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-tokyo750w03/anat/sub-tokyo750w03_space-other_T2w_label-SC_seg.json b/derivatives/labels/sub-tokyo750w03/anat/sub-tokyo750w03_space-other_T2w_label-SC_seg.json index 6c111518ae..4763e41be0 100644 --- a/derivatives/labels/sub-tokyo750w03/anat/sub-tokyo750w03_space-other_T2w_label-SC_seg.json +++ b/derivatives/labels/sub-tokyo750w03/anat/sub-tokyo750w03_space-other_T2w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Etienne Bergeron", - "Date": "2021-06-30 14:50:38" + "Date": "2021-06-30 14:50:38", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-tokyo750w03/dwi/sub-tokyo750w03_rec-average_dwi_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-tokyo750w03/dwi/sub-tokyo750w03_rec-average_dwi_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-tokyo750w03/dwi/sub-tokyo750w03_rec-average_dwi_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-tokyo750w04/anat/sub-tokyo750w04_flip-1_mt-on_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-tokyo750w04/anat/sub-tokyo750w04_flip-1_mt-on_space-other_MTS_label-SC_seg.json index 36e34d716d..0b6a4851ec 100644 --- a/derivatives/labels/sub-tokyo750w04/anat/sub-tokyo750w04_flip-1_mt-on_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-tokyo750w04/anat/sub-tokyo750w04_flip-1_mt-on_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Etienne Bergeron", - "Date": "2021-06-30 17:40:02" + "Date": "2021-06-30 17:40:02", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-tokyo750w04/anat/sub-tokyo750w04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-tokyo750w04/anat/sub-tokyo750w04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-tokyo750w04/anat/sub-tokyo750w04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-tokyo750w04/anat/sub-tokyo750w04_flip-2_mt-off_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-tokyo750w04/anat/sub-tokyo750w04_flip-2_mt-off_space-other_MTS_label-SC_seg.json index df71d11996..68f914a0bd 100644 --- a/derivatives/labels/sub-tokyo750w04/anat/sub-tokyo750w04_flip-2_mt-off_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-tokyo750w04/anat/sub-tokyo750w04_flip-2_mt-off_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Etienne Bergeron", - "Date": "2021-06-30 17:24:14" + "Date": "2021-06-30 17:24:14", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-tokyo750w04/anat/sub-tokyo750w04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-tokyo750w04/anat/sub-tokyo750w04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-tokyo750w04/anat/sub-tokyo750w04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-tokyo750w04/anat/sub-tokyo750w04_space-other_T1w_label-SC_seg.json b/derivatives/labels/sub-tokyo750w04/anat/sub-tokyo750w04_space-other_T1w_label-SC_seg.json index b1c385f845..cb38f358bf 100644 --- a/derivatives/labels/sub-tokyo750w04/anat/sub-tokyo750w04_space-other_T1w_label-SC_seg.json +++ b/derivatives/labels/sub-tokyo750w04/anat/sub-tokyo750w04_space-other_T1w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Paul Bautin", - "Date": "2020-07-29 15:05:49" + "Date": "2020-07-29 15:05:49", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-tokyo750w04/anat/sub-tokyo750w04_space-other_T2star_label-SC_seg.json b/derivatives/labels/sub-tokyo750w04/anat/sub-tokyo750w04_space-other_T2star_label-SC_seg.json index feb13615ca..533169896a 100644 --- a/derivatives/labels/sub-tokyo750w04/anat/sub-tokyo750w04_space-other_T2star_label-SC_seg.json +++ b/derivatives/labels/sub-tokyo750w04/anat/sub-tokyo750w04_space-other_T2star_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Etienne Bergeron", - "Date": "2021-07-02 10:39:38" + "Date": "2021-07-02 10:39:38", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-tokyo750w04/anat/sub-tokyo750w04_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-tokyo750w04/anat/sub-tokyo750w04_space-other_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-tokyo750w04/anat/sub-tokyo750w04_space-other_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-tokyo750w04/anat/sub-tokyo750w04_space-other_T2w_label-SC_seg.json b/derivatives/labels/sub-tokyo750w04/anat/sub-tokyo750w04_space-other_T2w_label-SC_seg.json index abe8cb721c..0492297fbd 100644 --- a/derivatives/labels/sub-tokyo750w04/anat/sub-tokyo750w04_space-other_T2w_label-SC_seg.json +++ b/derivatives/labels/sub-tokyo750w04/anat/sub-tokyo750w04_space-other_T2w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Etienne Bergeron", - "Date": "2021-06-30 15:00:36" + "Date": "2021-06-30 15:00:36", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-tokyo750w04/dwi/sub-tokyo750w04_rec-average_dwi_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-tokyo750w04/dwi/sub-tokyo750w04_rec-average_dwi_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-tokyo750w04/dwi/sub-tokyo750w04_rec-average_dwi_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-tokyo750w05/anat/sub-tokyo750w05_flip-1_mt-on_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-tokyo750w05/anat/sub-tokyo750w05_flip-1_mt-on_space-other_MTS_label-SC_seg.json index aa8f2fc016..8f2ec4af88 100644 --- a/derivatives/labels/sub-tokyo750w05/anat/sub-tokyo750w05_flip-1_mt-on_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-tokyo750w05/anat/sub-tokyo750w05_flip-1_mt-on_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Etienne Bergeron", - "Date": "2021-06-30 17:42:57" + "Date": "2021-06-30 17:42:57", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-tokyo750w05/anat/sub-tokyo750w05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-tokyo750w05/anat/sub-tokyo750w05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-tokyo750w05/anat/sub-tokyo750w05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-tokyo750w05/anat/sub-tokyo750w05_flip-2_mt-off_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-tokyo750w05/anat/sub-tokyo750w05_flip-2_mt-off_space-other_MTS_label-SC_seg.json index 6069a890c0..83b7a9f176 100644 --- a/derivatives/labels/sub-tokyo750w05/anat/sub-tokyo750w05_flip-2_mt-off_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-tokyo750w05/anat/sub-tokyo750w05_flip-2_mt-off_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Etienne Bergeron", - "Date": "2021-06-30 17:32:55" + "Date": "2021-06-30 17:32:55", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-tokyo750w05/anat/sub-tokyo750w05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-tokyo750w05/anat/sub-tokyo750w05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-tokyo750w05/anat/sub-tokyo750w05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-tokyo750w05/anat/sub-tokyo750w05_space-other_T1w_label-SC_seg.json b/derivatives/labels/sub-tokyo750w05/anat/sub-tokyo750w05_space-other_T1w_label-SC_seg.json index b395ed6529..66da472429 100644 --- a/derivatives/labels/sub-tokyo750w05/anat/sub-tokyo750w05_space-other_T1w_label-SC_seg.json +++ b/derivatives/labels/sub-tokyo750w05/anat/sub-tokyo750w05_space-other_T1w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-08-04 12:30:02" + "Date": "2021-08-04 12:30:02", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-tokyo750w05/anat/sub-tokyo750w05_space-other_T2star_gmlabel-SC_seg.json b/derivatives/labels/sub-tokyo750w05/anat/sub-tokyo750w05_space-other_T2star_gmlabel-SC_seg.json index 6e2bd03e2f..3ca7f81c55 100644 --- a/derivatives/labels/sub-tokyo750w05/anat/sub-tokyo750w05_space-other_T2star_gmlabel-SC_seg.json +++ b/derivatives/labels/sub-tokyo750w05/anat/sub-tokyo750w05_space-other_T2star_gmlabel-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-03 10:35:19" + "Date": "2021-06-03 10:35:19", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-tokyo750w05/anat/sub-tokyo750w05_space-other_T2star_label-SC_seg.json b/derivatives/labels/sub-tokyo750w05/anat/sub-tokyo750w05_space-other_T2star_label-SC_seg.json index e967576c8c..9147588297 100644 --- a/derivatives/labels/sub-tokyo750w05/anat/sub-tokyo750w05_space-other_T2star_label-SC_seg.json +++ b/derivatives/labels/sub-tokyo750w05/anat/sub-tokyo750w05_space-other_T2star_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:19" + "Date": "2021-06-08 15:06:19", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-tokyo750w05/anat/sub-tokyo750w05_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-tokyo750w05/anat/sub-tokyo750w05_space-other_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-tokyo750w05/anat/sub-tokyo750w05_space-other_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-tokyo750w05/anat/sub-tokyo750w05_space-other_T2w_label-SC_seg.json b/derivatives/labels/sub-tokyo750w05/anat/sub-tokyo750w05_space-other_T2w_label-SC_seg.json index e967576c8c..a3b7a43831 100644 --- a/derivatives/labels/sub-tokyo750w05/anat/sub-tokyo750w05_space-other_T2w_label-SC_seg.json +++ b/derivatives/labels/sub-tokyo750w05/anat/sub-tokyo750w05_space-other_T2w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:19" + "Date": "2021-06-08 15:06:19", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-tokyo750w05/dwi/sub-tokyo750w05_rec-average_dwi_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-tokyo750w05/dwi/sub-tokyo750w05_rec-average_dwi_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-tokyo750w05/dwi/sub-tokyo750w05_rec-average_dwi_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-tokyo750w06/anat/sub-tokyo750w06_flip-1_mt-on_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-tokyo750w06/anat/sub-tokyo750w06_flip-1_mt-on_space-other_MTS_label-SC_seg.json index b90de7a163..3d49ab9ab9 100644 --- a/derivatives/labels/sub-tokyo750w06/anat/sub-tokyo750w06_flip-1_mt-on_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-tokyo750w06/anat/sub-tokyo750w06_flip-1_mt-on_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Etienne Bergeron", - "Date": "2021-06-30 17:38:20" + "Date": "2021-06-30 17:38:20", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-tokyo750w06/anat/sub-tokyo750w06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-tokyo750w06/anat/sub-tokyo750w06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-tokyo750w06/anat/sub-tokyo750w06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-tokyo750w06/anat/sub-tokyo750w06_flip-2_mt-off_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-tokyo750w06/anat/sub-tokyo750w06_flip-2_mt-off_space-other_MTS_label-SC_seg.json index 568b208144..488e9eb23b 100644 --- a/derivatives/labels/sub-tokyo750w06/anat/sub-tokyo750w06_flip-2_mt-off_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-tokyo750w06/anat/sub-tokyo750w06_flip-2_mt-off_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-07-12 11:49:26" + "Date": "2021-07-12 11:49:26", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-tokyo750w06/anat/sub-tokyo750w06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-tokyo750w06/anat/sub-tokyo750w06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-tokyo750w06/anat/sub-tokyo750w06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-tokyo750w06/anat/sub-tokyo750w06_space-other_T1w_label-SC_seg.json b/derivatives/labels/sub-tokyo750w06/anat/sub-tokyo750w06_space-other_T1w_label-SC_seg.json index 6d4575d33f..fb24200a94 100644 --- a/derivatives/labels/sub-tokyo750w06/anat/sub-tokyo750w06_space-other_T1w_label-SC_seg.json +++ b/derivatives/labels/sub-tokyo750w06/anat/sub-tokyo750w06_space-other_T1w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-08-04 13:00:22" + "Date": "2021-08-04 13:00:22", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-tokyo750w06/anat/sub-tokyo750w06_space-other_T2star_gmlabel-SC_seg.json b/derivatives/labels/sub-tokyo750w06/anat/sub-tokyo750w06_space-other_T2star_gmlabel-SC_seg.json index 504f092660..dfbb1fccd7 100644 --- a/derivatives/labels/sub-tokyo750w06/anat/sub-tokyo750w06_space-other_T2star_gmlabel-SC_seg.json +++ b/derivatives/labels/sub-tokyo750w06/anat/sub-tokyo750w06_space-other_T2star_gmlabel-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-03 10:35:24" + "Date": "2021-06-03 10:35:24", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-tokyo750w06/anat/sub-tokyo750w06_space-other_T2star_label-SC_seg.json b/derivatives/labels/sub-tokyo750w06/anat/sub-tokyo750w06_space-other_T2star_label-SC_seg.json index e66faac78a..455b86415e 100644 --- a/derivatives/labels/sub-tokyo750w06/anat/sub-tokyo750w06_space-other_T2star_label-SC_seg.json +++ b/derivatives/labels/sub-tokyo750w06/anat/sub-tokyo750w06_space-other_T2star_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:20" + "Date": "2021-06-08 15:06:20", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-tokyo750w06/anat/sub-tokyo750w06_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-tokyo750w06/anat/sub-tokyo750w06_space-other_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-tokyo750w06/anat/sub-tokyo750w06_space-other_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-tokyo750w06/anat/sub-tokyo750w06_space-other_T2w_label-SC_seg.json b/derivatives/labels/sub-tokyo750w06/anat/sub-tokyo750w06_space-other_T2w_label-SC_seg.json index e5ea58c2a5..e40f864d8b 100644 --- a/derivatives/labels/sub-tokyo750w06/anat/sub-tokyo750w06_space-other_T2w_label-SC_seg.json +++ b/derivatives/labels/sub-tokyo750w06/anat/sub-tokyo750w06_space-other_T2w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Paul Bautin", - "Date": "2020-07-29 15:13:23" + "Date": "2020-07-29 15:13:23", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-tokyo750w06/dwi/sub-tokyo750w06_rec-average_dwi_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-tokyo750w06/dwi/sub-tokyo750w06_rec-average_dwi_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-tokyo750w06/dwi/sub-tokyo750w06_rec-average_dwi_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-tokyo750w07/anat/sub-tokyo750w07_flip-1_mt-on_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-tokyo750w07/anat/sub-tokyo750w07_flip-1_mt-on_space-other_MTS_label-SC_seg.json index e66faac78a..ba9d21cb50 100644 --- a/derivatives/labels/sub-tokyo750w07/anat/sub-tokyo750w07_flip-1_mt-on_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-tokyo750w07/anat/sub-tokyo750w07_flip-1_mt-on_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:20" + "Date": "2021-06-08 15:06:20", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-tokyo750w07/anat/sub-tokyo750w07_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-tokyo750w07/anat/sub-tokyo750w07_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-tokyo750w07/anat/sub-tokyo750w07_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-tokyo750w07/anat/sub-tokyo750w07_flip-2_mt-off_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-tokyo750w07/anat/sub-tokyo750w07_flip-2_mt-off_space-other_MTS_label-SC_seg.json index ea671df7ef..a01da324bf 100644 --- a/derivatives/labels/sub-tokyo750w07/anat/sub-tokyo750w07_flip-2_mt-off_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-tokyo750w07/anat/sub-tokyo750w07_flip-2_mt-off_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-07-12 11:52:32" + "Date": "2021-07-12 11:52:32", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-tokyo750w07/anat/sub-tokyo750w07_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-tokyo750w07/anat/sub-tokyo750w07_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-tokyo750w07/anat/sub-tokyo750w07_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-tokyo750w07/anat/sub-tokyo750w07_space-other_T1w_label-SC_seg.json b/derivatives/labels/sub-tokyo750w07/anat/sub-tokyo750w07_space-other_T1w_label-SC_seg.json index b5f09f63c2..5af66c351d 100644 --- a/derivatives/labels/sub-tokyo750w07/anat/sub-tokyo750w07_space-other_T1w_label-SC_seg.json +++ b/derivatives/labels/sub-tokyo750w07/anat/sub-tokyo750w07_space-other_T1w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-07-07 16:17:19" + "Date": "2021-07-07 16:17:19", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-tokyo750w07/anat/sub-tokyo750w07_space-other_T2star_label-SC_seg.json b/derivatives/labels/sub-tokyo750w07/anat/sub-tokyo750w07_space-other_T2star_label-SC_seg.json index e66faac78a..455b86415e 100644 --- a/derivatives/labels/sub-tokyo750w07/anat/sub-tokyo750w07_space-other_T2star_label-SC_seg.json +++ b/derivatives/labels/sub-tokyo750w07/anat/sub-tokyo750w07_space-other_T2star_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:20" + "Date": "2021-06-08 15:06:20", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-tokyo750w07/anat/sub-tokyo750w07_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-tokyo750w07/anat/sub-tokyo750w07_space-other_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-tokyo750w07/anat/sub-tokyo750w07_space-other_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-tokyo750w07/anat/sub-tokyo750w07_space-other_T2w_label-SC_seg.json b/derivatives/labels/sub-tokyo750w07/anat/sub-tokyo750w07_space-other_T2w_label-SC_seg.json index 01d7e80584..9bf9d9eb42 100644 --- a/derivatives/labels/sub-tokyo750w07/anat/sub-tokyo750w07_space-other_T2w_label-SC_seg.json +++ b/derivatives/labels/sub-tokyo750w07/anat/sub-tokyo750w07_space-other_T2w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Etienne Bergeron", - "Date": "2021-06-30 17:12:10" + "Date": "2021-06-30 17:12:10", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-tokyo750w07/dwi/sub-tokyo750w07_rec-average_dwi_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-tokyo750w07/dwi/sub-tokyo750w07_rec-average_dwi_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-tokyo750w07/dwi/sub-tokyo750w07_rec-average_dwi_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-tokyoIngenia01/anat/sub-tokyoIngenia01_flip-1_mt-on_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-tokyoIngenia01/anat/sub-tokyoIngenia01_flip-1_mt-on_space-other_MTS_label-SC_seg.json index e66faac78a..ba9d21cb50 100644 --- a/derivatives/labels/sub-tokyoIngenia01/anat/sub-tokyoIngenia01_flip-1_mt-on_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-tokyoIngenia01/anat/sub-tokyoIngenia01_flip-1_mt-on_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:20" + "Date": "2021-06-08 15:06:20", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-tokyoIngenia01/anat/sub-tokyoIngenia01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-tokyoIngenia01/anat/sub-tokyoIngenia01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-tokyoIngenia01/anat/sub-tokyoIngenia01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-tokyoIngenia01/anat/sub-tokyoIngenia01_flip-2_mt-off_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-tokyoIngenia01/anat/sub-tokyoIngenia01_flip-2_mt-off_space-other_MTS_label-SC_seg.json index e66faac78a..ba9d21cb50 100644 --- a/derivatives/labels/sub-tokyoIngenia01/anat/sub-tokyoIngenia01_flip-2_mt-off_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-tokyoIngenia01/anat/sub-tokyoIngenia01_flip-2_mt-off_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:20" + "Date": "2021-06-08 15:06:20", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-tokyoIngenia01/anat/sub-tokyoIngenia01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-tokyoIngenia01/anat/sub-tokyoIngenia01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-tokyoIngenia01/anat/sub-tokyoIngenia01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-tokyoIngenia01/anat/sub-tokyoIngenia01_space-other_T1w_label-SC_seg.json b/derivatives/labels/sub-tokyoIngenia01/anat/sub-tokyoIngenia01_space-other_T1w_label-SC_seg.json index 5c86c75256..cbbfa1e713 100644 --- a/derivatives/labels/sub-tokyoIngenia01/anat/sub-tokyoIngenia01_space-other_T1w_label-SC_seg.json +++ b/derivatives/labels/sub-tokyoIngenia01/anat/sub-tokyoIngenia01_space-other_T1w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Yassine El Bouchaibi", - "Date": "2021-07-02 15:58:16" + "Date": "2021-07-02 15:58:16", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-tokyoIngenia01/anat/sub-tokyoIngenia01_space-other_T2star_gmlabel-SC_seg.json b/derivatives/labels/sub-tokyoIngenia01/anat/sub-tokyoIngenia01_space-other_T2star_gmlabel-SC_seg.json index 01859567c7..e339e198ac 100644 --- a/derivatives/labels/sub-tokyoIngenia01/anat/sub-tokyoIngenia01_space-other_T2star_gmlabel-SC_seg.json +++ b/derivatives/labels/sub-tokyoIngenia01/anat/sub-tokyoIngenia01_space-other_T2star_gmlabel-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-03 10:34:52" + "Date": "2021-06-03 10:34:52", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-tokyoIngenia01/anat/sub-tokyoIngenia01_space-other_T2star_label-SC_seg.json b/derivatives/labels/sub-tokyoIngenia01/anat/sub-tokyoIngenia01_space-other_T2star_label-SC_seg.json index e66faac78a..455b86415e 100644 --- a/derivatives/labels/sub-tokyoIngenia01/anat/sub-tokyoIngenia01_space-other_T2star_label-SC_seg.json +++ b/derivatives/labels/sub-tokyoIngenia01/anat/sub-tokyoIngenia01_space-other_T2star_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:20" + "Date": "2021-06-08 15:06:20", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-tokyoIngenia01/anat/sub-tokyoIngenia01_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-tokyoIngenia01/anat/sub-tokyoIngenia01_space-other_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-tokyoIngenia01/anat/sub-tokyoIngenia01_space-other_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-tokyoIngenia01/anat/sub-tokyoIngenia01_space-other_T2w_label-SC_seg.json b/derivatives/labels/sub-tokyoIngenia01/anat/sub-tokyoIngenia01_space-other_T2w_label-SC_seg.json index e66faac78a..626cade51a 100644 --- a/derivatives/labels/sub-tokyoIngenia01/anat/sub-tokyoIngenia01_space-other_T2w_label-SC_seg.json +++ b/derivatives/labels/sub-tokyoIngenia01/anat/sub-tokyoIngenia01_space-other_T2w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:20" + "Date": "2021-06-08 15:06:20", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-tokyoIngenia01/dwi/sub-tokyoIngenia01_rec-average_dwi_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-tokyoIngenia01/dwi/sub-tokyoIngenia01_rec-average_dwi_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-tokyoIngenia01/dwi/sub-tokyoIngenia01_rec-average_dwi_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-tokyoIngenia02/anat/sub-tokyoIngenia02_flip-1_mt-on_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-tokyoIngenia02/anat/sub-tokyoIngenia02_flip-1_mt-on_space-other_MTS_label-SC_seg.json index e1e6578509..ef6d249905 100644 --- a/derivatives/labels/sub-tokyoIngenia02/anat/sub-tokyoIngenia02_flip-1_mt-on_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-tokyoIngenia02/anat/sub-tokyoIngenia02_flip-1_mt-on_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Etienne Bergeron", - "Date": "2021-06-30 17:41:28" + "Date": "2021-06-30 17:41:28", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-tokyoIngenia02/anat/sub-tokyoIngenia02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-tokyoIngenia02/anat/sub-tokyoIngenia02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-tokyoIngenia02/anat/sub-tokyoIngenia02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-tokyoIngenia02/anat/sub-tokyoIngenia02_flip-2_mt-off_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-tokyoIngenia02/anat/sub-tokyoIngenia02_flip-2_mt-off_space-other_MTS_label-SC_seg.json index 5eae31552f..8f30b27731 100644 --- a/derivatives/labels/sub-tokyoIngenia02/anat/sub-tokyoIngenia02_flip-2_mt-off_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-tokyoIngenia02/anat/sub-tokyoIngenia02_flip-2_mt-off_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Etienne Bergeron", - "Date": "2021-06-30 17:26:26" + "Date": "2021-06-30 17:26:26", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-tokyoIngenia02/anat/sub-tokyoIngenia02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-tokyoIngenia02/anat/sub-tokyoIngenia02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-tokyoIngenia02/anat/sub-tokyoIngenia02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-tokyoIngenia02/anat/sub-tokyoIngenia02_space-other_T1w_label-SC_seg.json b/derivatives/labels/sub-tokyoIngenia02/anat/sub-tokyoIngenia02_space-other_T1w_label-SC_seg.json index 56d5791283..14fe3157bb 100644 --- a/derivatives/labels/sub-tokyoIngenia02/anat/sub-tokyoIngenia02_space-other_T1w_label-SC_seg.json +++ b/derivatives/labels/sub-tokyoIngenia02/anat/sub-tokyoIngenia02_space-other_T1w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Yassine El Bouchaibi", - "Date": "2021-07-02 15:52:59" + "Date": "2021-07-02 15:52:59", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-tokyoIngenia02/anat/sub-tokyoIngenia02_space-other_T2star_gmlabel-SC_seg.json b/derivatives/labels/sub-tokyoIngenia02/anat/sub-tokyoIngenia02_space-other_T2star_gmlabel-SC_seg.json index 6e2bd03e2f..3ca7f81c55 100644 --- a/derivatives/labels/sub-tokyoIngenia02/anat/sub-tokyoIngenia02_space-other_T2star_gmlabel-SC_seg.json +++ b/derivatives/labels/sub-tokyoIngenia02/anat/sub-tokyoIngenia02_space-other_T2star_gmlabel-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-03 10:35:19" + "Date": "2021-06-03 10:35:19", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-tokyoIngenia02/anat/sub-tokyoIngenia02_space-other_T2star_label-SC_seg.json b/derivatives/labels/sub-tokyoIngenia02/anat/sub-tokyoIngenia02_space-other_T2star_label-SC_seg.json index e66faac78a..455b86415e 100644 --- a/derivatives/labels/sub-tokyoIngenia02/anat/sub-tokyoIngenia02_space-other_T2star_label-SC_seg.json +++ b/derivatives/labels/sub-tokyoIngenia02/anat/sub-tokyoIngenia02_space-other_T2star_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:20" + "Date": "2021-06-08 15:06:20", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-tokyoIngenia02/anat/sub-tokyoIngenia02_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-tokyoIngenia02/anat/sub-tokyoIngenia02_space-other_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-tokyoIngenia02/anat/sub-tokyoIngenia02_space-other_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-tokyoIngenia02/anat/sub-tokyoIngenia02_space-other_T2w_label-SC_seg.json b/derivatives/labels/sub-tokyoIngenia02/anat/sub-tokyoIngenia02_space-other_T2w_label-SC_seg.json index e66faac78a..626cade51a 100644 --- a/derivatives/labels/sub-tokyoIngenia02/anat/sub-tokyoIngenia02_space-other_T2w_label-SC_seg.json +++ b/derivatives/labels/sub-tokyoIngenia02/anat/sub-tokyoIngenia02_space-other_T2w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:20" + "Date": "2021-06-08 15:06:20", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-tokyoIngenia02/dwi/sub-tokyoIngenia02_rec-average_dwi_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-tokyoIngenia02/dwi/sub-tokyoIngenia02_rec-average_dwi_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-tokyoIngenia02/dwi/sub-tokyoIngenia02_rec-average_dwi_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-tokyoIngenia03/anat/sub-tokyoIngenia03_flip-1_mt-on_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-tokyoIngenia03/anat/sub-tokyoIngenia03_flip-1_mt-on_space-other_MTS_label-SC_seg.json index e66faac78a..ba9d21cb50 100644 --- a/derivatives/labels/sub-tokyoIngenia03/anat/sub-tokyoIngenia03_flip-1_mt-on_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-tokyoIngenia03/anat/sub-tokyoIngenia03_flip-1_mt-on_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:20" + "Date": "2021-06-08 15:06:20", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-tokyoIngenia03/anat/sub-tokyoIngenia03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-tokyoIngenia03/anat/sub-tokyoIngenia03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-tokyoIngenia03/anat/sub-tokyoIngenia03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-tokyoIngenia03/anat/sub-tokyoIngenia03_flip-2_mt-off_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-tokyoIngenia03/anat/sub-tokyoIngenia03_flip-2_mt-off_space-other_MTS_label-SC_seg.json index e66faac78a..ba9d21cb50 100644 --- a/derivatives/labels/sub-tokyoIngenia03/anat/sub-tokyoIngenia03_flip-2_mt-off_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-tokyoIngenia03/anat/sub-tokyoIngenia03_flip-2_mt-off_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:20" + "Date": "2021-06-08 15:06:20", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-tokyoIngenia03/anat/sub-tokyoIngenia03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-tokyoIngenia03/anat/sub-tokyoIngenia03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-tokyoIngenia03/anat/sub-tokyoIngenia03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-tokyoIngenia03/anat/sub-tokyoIngenia03_space-other_T1w_label-SC_seg.json b/derivatives/labels/sub-tokyoIngenia03/anat/sub-tokyoIngenia03_space-other_T1w_label-SC_seg.json index 6e2bd03e2f..aa3840ec48 100644 --- a/derivatives/labels/sub-tokyoIngenia03/anat/sub-tokyoIngenia03_space-other_T1w_label-SC_seg.json +++ b/derivatives/labels/sub-tokyoIngenia03/anat/sub-tokyoIngenia03_space-other_T1w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-03 10:35:19" + "Date": "2021-06-03 10:35:19", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-tokyoIngenia03/anat/sub-tokyoIngenia03_space-other_T2star_gmlabel-SC_seg.json b/derivatives/labels/sub-tokyoIngenia03/anat/sub-tokyoIngenia03_space-other_T2star_gmlabel-SC_seg.json index 6e2bd03e2f..3ca7f81c55 100644 --- a/derivatives/labels/sub-tokyoIngenia03/anat/sub-tokyoIngenia03_space-other_T2star_gmlabel-SC_seg.json +++ b/derivatives/labels/sub-tokyoIngenia03/anat/sub-tokyoIngenia03_space-other_T2star_gmlabel-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-03 10:35:19" + "Date": "2021-06-03 10:35:19", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-tokyoIngenia03/anat/sub-tokyoIngenia03_space-other_T2star_label-SC_seg.json b/derivatives/labels/sub-tokyoIngenia03/anat/sub-tokyoIngenia03_space-other_T2star_label-SC_seg.json index e66faac78a..455b86415e 100644 --- a/derivatives/labels/sub-tokyoIngenia03/anat/sub-tokyoIngenia03_space-other_T2star_label-SC_seg.json +++ b/derivatives/labels/sub-tokyoIngenia03/anat/sub-tokyoIngenia03_space-other_T2star_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:20" + "Date": "2021-06-08 15:06:20", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-tokyoIngenia03/anat/sub-tokyoIngenia03_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-tokyoIngenia03/anat/sub-tokyoIngenia03_space-other_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-tokyoIngenia03/anat/sub-tokyoIngenia03_space-other_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-tokyoIngenia03/anat/sub-tokyoIngenia03_space-other_T2w_label-SC_seg.json b/derivatives/labels/sub-tokyoIngenia03/anat/sub-tokyoIngenia03_space-other_T2w_label-SC_seg.json index c77126f09d..b2e4f2a2b1 100644 --- a/derivatives/labels/sub-tokyoIngenia03/anat/sub-tokyoIngenia03_space-other_T2w_label-SC_seg.json +++ b/derivatives/labels/sub-tokyoIngenia03/anat/sub-tokyoIngenia03_space-other_T2w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Etienne Bergeron", - "Date": "2021-07-02 10:54:07" + "Date": "2021-07-02 10:54:07", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-tokyoIngenia03/dwi/sub-tokyoIngenia03_rec-average_dwi_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-tokyoIngenia03/dwi/sub-tokyoIngenia03_rec-average_dwi_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-tokyoIngenia03/dwi/sub-tokyoIngenia03_rec-average_dwi_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-tokyoIngenia04/anat/sub-tokyoIngenia04_flip-1_mt-on_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-tokyoIngenia04/anat/sub-tokyoIngenia04_flip-1_mt-on_space-other_MTS_label-SC_seg.json index d88392a165..817add420c 100644 --- a/derivatives/labels/sub-tokyoIngenia04/anat/sub-tokyoIngenia04_flip-1_mt-on_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-tokyoIngenia04/anat/sub-tokyoIngenia04_flip-1_mt-on_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-07-12 11:53:00" + "Date": "2021-07-12 11:53:00", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-tokyoIngenia04/anat/sub-tokyoIngenia04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-tokyoIngenia04/anat/sub-tokyoIngenia04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-tokyoIngenia04/anat/sub-tokyoIngenia04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-tokyoIngenia04/anat/sub-tokyoIngenia04_flip-2_mt-off_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-tokyoIngenia04/anat/sub-tokyoIngenia04_flip-2_mt-off_space-other_MTS_label-SC_seg.json index dae228c3f8..3df861398b 100644 --- a/derivatives/labels/sub-tokyoIngenia04/anat/sub-tokyoIngenia04_flip-2_mt-off_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-tokyoIngenia04/anat/sub-tokyoIngenia04_flip-2_mt-off_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Etienne Bergeron", - "Date": "2021-07-02 11:50:36" + "Date": "2021-07-02 11:50:36", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-tokyoIngenia04/anat/sub-tokyoIngenia04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-tokyoIngenia04/anat/sub-tokyoIngenia04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-tokyoIngenia04/anat/sub-tokyoIngenia04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-tokyoIngenia04/anat/sub-tokyoIngenia04_space-other_T1w_label-SC_seg.json b/derivatives/labels/sub-tokyoIngenia04/anat/sub-tokyoIngenia04_space-other_T1w_label-SC_seg.json index ce3beb6c5f..7d3573204e 100644 --- a/derivatives/labels/sub-tokyoIngenia04/anat/sub-tokyoIngenia04_space-other_T1w_label-SC_seg.json +++ b/derivatives/labels/sub-tokyoIngenia04/anat/sub-tokyoIngenia04_space-other_T1w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Etienne Bergeron", - "Date": "2021-07-02 10:42:26" + "Date": "2021-07-02 10:42:26", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-tokyoIngenia04/anat/sub-tokyoIngenia04_space-other_T2star_gmlabel-SC_seg.json b/derivatives/labels/sub-tokyoIngenia04/anat/sub-tokyoIngenia04_space-other_T2star_gmlabel-SC_seg.json index 3e830bf0db..58d47c5ed2 100644 --- a/derivatives/labels/sub-tokyoIngenia04/anat/sub-tokyoIngenia04_space-other_T2star_gmlabel-SC_seg.json +++ b/derivatives/labels/sub-tokyoIngenia04/anat/sub-tokyoIngenia04_space-other_T2star_gmlabel-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-03 10:35:23" + "Date": "2021-06-03 10:35:23", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-tokyoIngenia04/anat/sub-tokyoIngenia04_space-other_T2star_label-SC_seg.json b/derivatives/labels/sub-tokyoIngenia04/anat/sub-tokyoIngenia04_space-other_T2star_label-SC_seg.json index 5c970e4973..f5a8e1cc3f 100644 --- a/derivatives/labels/sub-tokyoIngenia04/anat/sub-tokyoIngenia04_space-other_T2star_label-SC_seg.json +++ b/derivatives/labels/sub-tokyoIngenia04/anat/sub-tokyoIngenia04_space-other_T2star_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Etienne Bergeron", - "Date": "2021-07-02 13:15:49" + "Date": "2021-07-02 13:15:49", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-tokyoIngenia04/anat/sub-tokyoIngenia04_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-tokyoIngenia04/anat/sub-tokyoIngenia04_space-other_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-tokyoIngenia04/anat/sub-tokyoIngenia04_space-other_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-tokyoIngenia04/anat/sub-tokyoIngenia04_space-other_T2w_label-SC_seg.json b/derivatives/labels/sub-tokyoIngenia04/anat/sub-tokyoIngenia04_space-other_T2w_label-SC_seg.json index e66faac78a..626cade51a 100644 --- a/derivatives/labels/sub-tokyoIngenia04/anat/sub-tokyoIngenia04_space-other_T2w_label-SC_seg.json +++ b/derivatives/labels/sub-tokyoIngenia04/anat/sub-tokyoIngenia04_space-other_T2w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:20" + "Date": "2021-06-08 15:06:20", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-tokyoIngenia04/dwi/sub-tokyoIngenia04_rec-average_dwi_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-tokyoIngenia04/dwi/sub-tokyoIngenia04_rec-average_dwi_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-tokyoIngenia04/dwi/sub-tokyoIngenia04_rec-average_dwi_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-tokyoIngenia05/anat/sub-tokyoIngenia05_flip-1_mt-on_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-tokyoIngenia05/anat/sub-tokyoIngenia05_flip-1_mt-on_space-other_MTS_label-SC_seg.json index e66faac78a..ba9d21cb50 100644 --- a/derivatives/labels/sub-tokyoIngenia05/anat/sub-tokyoIngenia05_flip-1_mt-on_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-tokyoIngenia05/anat/sub-tokyoIngenia05_flip-1_mt-on_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:20" + "Date": "2021-06-08 15:06:20", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-tokyoIngenia05/anat/sub-tokyoIngenia05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-tokyoIngenia05/anat/sub-tokyoIngenia05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-tokyoIngenia05/anat/sub-tokyoIngenia05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-tokyoIngenia05/anat/sub-tokyoIngenia05_flip-2_mt-off_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-tokyoIngenia05/anat/sub-tokyoIngenia05_flip-2_mt-off_space-other_MTS_label-SC_seg.json index e66faac78a..ba9d21cb50 100644 --- a/derivatives/labels/sub-tokyoIngenia05/anat/sub-tokyoIngenia05_flip-2_mt-off_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-tokyoIngenia05/anat/sub-tokyoIngenia05_flip-2_mt-off_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:20" + "Date": "2021-06-08 15:06:20", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-tokyoIngenia05/anat/sub-tokyoIngenia05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-tokyoIngenia05/anat/sub-tokyoIngenia05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-tokyoIngenia05/anat/sub-tokyoIngenia05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-tokyoIngenia05/anat/sub-tokyoIngenia05_space-other_T1w_label-SC_seg.json b/derivatives/labels/sub-tokyoIngenia05/anat/sub-tokyoIngenia05_space-other_T1w_label-SC_seg.json index 2c91772445..a1baf42634 100644 --- a/derivatives/labels/sub-tokyoIngenia05/anat/sub-tokyoIngenia05_space-other_T1w_label-SC_seg.json +++ b/derivatives/labels/sub-tokyoIngenia05/anat/sub-tokyoIngenia05_space-other_T1w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Etienne Bergeron", - "Date": "2021-07-02 10:44:40" + "Date": "2021-07-02 10:44:40", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-tokyoIngenia05/anat/sub-tokyoIngenia05_space-other_T2star_label-SC_seg.json b/derivatives/labels/sub-tokyoIngenia05/anat/sub-tokyoIngenia05_space-other_T2star_label-SC_seg.json index 3e9c1e9ea9..6d930b87fb 100644 --- a/derivatives/labels/sub-tokyoIngenia05/anat/sub-tokyoIngenia05_space-other_T2star_label-SC_seg.json +++ b/derivatives/labels/sub-tokyoIngenia05/anat/sub-tokyoIngenia05_space-other_T2star_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Etienne Bergeron", - "Date": "2021-07-02 13:20:04" + "Date": "2021-07-02 13:20:04", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-tokyoIngenia05/anat/sub-tokyoIngenia05_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-tokyoIngenia05/anat/sub-tokyoIngenia05_space-other_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-tokyoIngenia05/anat/sub-tokyoIngenia05_space-other_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-tokyoIngenia05/anat/sub-tokyoIngenia05_space-other_T2w_csflabel-SC_seg.json b/derivatives/labels/sub-tokyoIngenia05/anat/sub-tokyoIngenia05_space-other_T2w_csflabel-SC_seg.json index 5d72cb8aaa..2edede9801 100644 --- a/derivatives/labels/sub-tokyoIngenia05/anat/sub-tokyoIngenia05_space-other_T2w_csflabel-SC_seg.json +++ b/derivatives/labels/sub-tokyoIngenia05/anat/sub-tokyoIngenia05_space-other_T2w_csflabel-SC_seg.json @@ -1,3 +1,7 @@ { - "author": "Charley Gros" -} + "author": "Charley Gros", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/labels/sub-tokyoIngenia05/anat/sub-tokyoIngenia05_space-other_T2w_label-SC_seg.json b/derivatives/labels/sub-tokyoIngenia05/anat/sub-tokyoIngenia05_space-other_T2w_label-SC_seg.json index e66faac78a..626cade51a 100644 --- a/derivatives/labels/sub-tokyoIngenia05/anat/sub-tokyoIngenia05_space-other_T2w_label-SC_seg.json +++ b/derivatives/labels/sub-tokyoIngenia05/anat/sub-tokyoIngenia05_space-other_T2w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:20" + "Date": "2021-06-08 15:06:20", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-tokyoIngenia05/dwi/sub-tokyoIngenia05_rec-average_dwi_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-tokyoIngenia05/dwi/sub-tokyoIngenia05_rec-average_dwi_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-tokyoIngenia05/dwi/sub-tokyoIngenia05_rec-average_dwi_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-tokyoIngenia06/anat/sub-tokyoIngenia06_flip-1_mt-on_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-tokyoIngenia06/anat/sub-tokyoIngenia06_flip-1_mt-on_space-other_MTS_label-SC_seg.json index e66faac78a..ba9d21cb50 100644 --- a/derivatives/labels/sub-tokyoIngenia06/anat/sub-tokyoIngenia06_flip-1_mt-on_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-tokyoIngenia06/anat/sub-tokyoIngenia06_flip-1_mt-on_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:20" + "Date": "2021-06-08 15:06:20", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-tokyoIngenia06/anat/sub-tokyoIngenia06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-tokyoIngenia06/anat/sub-tokyoIngenia06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-tokyoIngenia06/anat/sub-tokyoIngenia06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-tokyoIngenia06/anat/sub-tokyoIngenia06_flip-2_mt-off_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-tokyoIngenia06/anat/sub-tokyoIngenia06_flip-2_mt-off_space-other_MTS_label-SC_seg.json index bcd8f28d3e..4f3842d955 100644 --- a/derivatives/labels/sub-tokyoIngenia06/anat/sub-tokyoIngenia06_flip-2_mt-off_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-tokyoIngenia06/anat/sub-tokyoIngenia06_flip-2_mt-off_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Etienne Bergeron", - "Date": "2021-07-02 13:17:43" + "Date": "2021-07-02 13:17:43", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-tokyoIngenia06/anat/sub-tokyoIngenia06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-tokyoIngenia06/anat/sub-tokyoIngenia06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-tokyoIngenia06/anat/sub-tokyoIngenia06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-tokyoIngenia06/anat/sub-tokyoIngenia06_space-other_T1w_label-SC_seg.json b/derivatives/labels/sub-tokyoIngenia06/anat/sub-tokyoIngenia06_space-other_T1w_label-SC_seg.json index cdb55c6b73..e67b17bf9a 100644 --- a/derivatives/labels/sub-tokyoIngenia06/anat/sub-tokyoIngenia06_space-other_T1w_label-SC_seg.json +++ b/derivatives/labels/sub-tokyoIngenia06/anat/sub-tokyoIngenia06_space-other_T1w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Etienne Bergeron", - "Date": "2021-07-02 11:31:14" + "Date": "2021-07-02 11:31:14", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-tokyoIngenia06/anat/sub-tokyoIngenia06_space-other_T2star_label-SC_seg.json b/derivatives/labels/sub-tokyoIngenia06/anat/sub-tokyoIngenia06_space-other_T2star_label-SC_seg.json index e66faac78a..455b86415e 100644 --- a/derivatives/labels/sub-tokyoIngenia06/anat/sub-tokyoIngenia06_space-other_T2star_label-SC_seg.json +++ b/derivatives/labels/sub-tokyoIngenia06/anat/sub-tokyoIngenia06_space-other_T2star_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:20" + "Date": "2021-06-08 15:06:20", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-tokyoIngenia06/anat/sub-tokyoIngenia06_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-tokyoIngenia06/anat/sub-tokyoIngenia06_space-other_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-tokyoIngenia06/anat/sub-tokyoIngenia06_space-other_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-tokyoIngenia06/anat/sub-tokyoIngenia06_space-other_T2w_csflabel-SC_seg.json b/derivatives/labels/sub-tokyoIngenia06/anat/sub-tokyoIngenia06_space-other_T2w_csflabel-SC_seg.json index 5d72cb8aaa..2edede9801 100644 --- a/derivatives/labels/sub-tokyoIngenia06/anat/sub-tokyoIngenia06_space-other_T2w_csflabel-SC_seg.json +++ b/derivatives/labels/sub-tokyoIngenia06/anat/sub-tokyoIngenia06_space-other_T2w_csflabel-SC_seg.json @@ -1,3 +1,7 @@ { - "author": "Charley Gros" -} + "author": "Charley Gros", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/labels/sub-tokyoIngenia06/anat/sub-tokyoIngenia06_space-other_T2w_label-SC_seg.json b/derivatives/labels/sub-tokyoIngenia06/anat/sub-tokyoIngenia06_space-other_T2w_label-SC_seg.json index e66faac78a..626cade51a 100644 --- a/derivatives/labels/sub-tokyoIngenia06/anat/sub-tokyoIngenia06_space-other_T2w_label-SC_seg.json +++ b/derivatives/labels/sub-tokyoIngenia06/anat/sub-tokyoIngenia06_space-other_T2w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:20" + "Date": "2021-06-08 15:06:20", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-tokyoIngenia06/dwi/sub-tokyoIngenia06_rec-average_dwi_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-tokyoIngenia06/dwi/sub-tokyoIngenia06_rec-average_dwi_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-tokyoIngenia06/dwi/sub-tokyoIngenia06_rec-average_dwi_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-tokyoIngenia07/anat/sub-tokyoIngenia07_flip-1_mt-on_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-tokyoIngenia07/anat/sub-tokyoIngenia07_flip-1_mt-on_space-other_MTS_label-SC_seg.json index a16370c08d..7752e96514 100644 --- a/derivatives/labels/sub-tokyoIngenia07/anat/sub-tokyoIngenia07_flip-1_mt-on_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-tokyoIngenia07/anat/sub-tokyoIngenia07_flip-1_mt-on_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:21" + "Date": "2021-06-08 15:06:21", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-tokyoIngenia07/anat/sub-tokyoIngenia07_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-tokyoIngenia07/anat/sub-tokyoIngenia07_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-tokyoIngenia07/anat/sub-tokyoIngenia07_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-tokyoIngenia07/anat/sub-tokyoIngenia07_flip-2_mt-off_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-tokyoIngenia07/anat/sub-tokyoIngenia07_flip-2_mt-off_space-other_MTS_label-SC_seg.json index 14125b8516..3c62d90f66 100644 --- a/derivatives/labels/sub-tokyoIngenia07/anat/sub-tokyoIngenia07_flip-2_mt-off_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-tokyoIngenia07/anat/sub-tokyoIngenia07_flip-2_mt-off_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Etienne Bergeron", - "Date": "2021-07-02 13:21:39" + "Date": "2021-07-02 13:21:39", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-tokyoIngenia07/anat/sub-tokyoIngenia07_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-tokyoIngenia07/anat/sub-tokyoIngenia07_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-tokyoIngenia07/anat/sub-tokyoIngenia07_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-tokyoIngenia07/anat/sub-tokyoIngenia07_space-other_T1w_label-SC_seg.json b/derivatives/labels/sub-tokyoIngenia07/anat/sub-tokyoIngenia07_space-other_T1w_label-SC_seg.json index 85521747cd..a30b651242 100644 --- a/derivatives/labels/sub-tokyoIngenia07/anat/sub-tokyoIngenia07_space-other_T1w_label-SC_seg.json +++ b/derivatives/labels/sub-tokyoIngenia07/anat/sub-tokyoIngenia07_space-other_T1w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Etienne Bergeron", - "Date": "2021-07-02 11:41:03" + "Date": "2021-07-02 11:41:03", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-tokyoIngenia07/anat/sub-tokyoIngenia07_space-other_T2star_label-SC_seg.json b/derivatives/labels/sub-tokyoIngenia07/anat/sub-tokyoIngenia07_space-other_T2star_label-SC_seg.json index a16370c08d..e481b1fc6c 100644 --- a/derivatives/labels/sub-tokyoIngenia07/anat/sub-tokyoIngenia07_space-other_T2star_label-SC_seg.json +++ b/derivatives/labels/sub-tokyoIngenia07/anat/sub-tokyoIngenia07_space-other_T2star_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:21" + "Date": "2021-06-08 15:06:21", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-tokyoIngenia07/anat/sub-tokyoIngenia07_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-tokyoIngenia07/anat/sub-tokyoIngenia07_space-other_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-tokyoIngenia07/anat/sub-tokyoIngenia07_space-other_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-tokyoIngenia07/anat/sub-tokyoIngenia07_space-other_T2w_label-SC_seg.json b/derivatives/labels/sub-tokyoIngenia07/anat/sub-tokyoIngenia07_space-other_T2w_label-SC_seg.json index a16370c08d..3834a7469f 100644 --- a/derivatives/labels/sub-tokyoIngenia07/anat/sub-tokyoIngenia07_space-other_T2w_label-SC_seg.json +++ b/derivatives/labels/sub-tokyoIngenia07/anat/sub-tokyoIngenia07_space-other_T2w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:21" + "Date": "2021-06-08 15:06:21", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-tokyoIngenia07/dwi/sub-tokyoIngenia07_rec-average_dwi_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-tokyoIngenia07/dwi/sub-tokyoIngenia07_rec-average_dwi_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-tokyoIngenia07/dwi/sub-tokyoIngenia07_rec-average_dwi_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-tokyoSkyra01/anat/sub-tokyoSkyra01_flip-1_mt-on_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-tokyoSkyra01/anat/sub-tokyoSkyra01_flip-1_mt-on_space-other_MTS_label-SC_seg.json index a16370c08d..7752e96514 100644 --- a/derivatives/labels/sub-tokyoSkyra01/anat/sub-tokyoSkyra01_flip-1_mt-on_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-tokyoSkyra01/anat/sub-tokyoSkyra01_flip-1_mt-on_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:21" + "Date": "2021-06-08 15:06:21", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-tokyoSkyra01/anat/sub-tokyoSkyra01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-tokyoSkyra01/anat/sub-tokyoSkyra01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-tokyoSkyra01/anat/sub-tokyoSkyra01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-tokyoSkyra01/anat/sub-tokyoSkyra01_flip-2_mt-off_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-tokyoSkyra01/anat/sub-tokyoSkyra01_flip-2_mt-off_space-other_MTS_label-SC_seg.json index d41a1add14..81ba260b25 100644 --- a/derivatives/labels/sub-tokyoSkyra01/anat/sub-tokyoSkyra01_flip-2_mt-off_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-tokyoSkyra01/anat/sub-tokyoSkyra01_flip-2_mt-off_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Etienne Bergeron", - "Date": "2021-07-02 13:23:03" + "Date": "2021-07-02 13:23:03", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-tokyoSkyra01/anat/sub-tokyoSkyra01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-tokyoSkyra01/anat/sub-tokyoSkyra01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-tokyoSkyra01/anat/sub-tokyoSkyra01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-tokyoSkyra01/anat/sub-tokyoSkyra01_space-other_T1w_label-SC_seg.json b/derivatives/labels/sub-tokyoSkyra01/anat/sub-tokyoSkyra01_space-other_T1w_label-SC_seg.json index 7d591a50fd..64521b88df 100644 --- a/derivatives/labels/sub-tokyoSkyra01/anat/sub-tokyoSkyra01_space-other_T1w_label-SC_seg.json +++ b/derivatives/labels/sub-tokyoSkyra01/anat/sub-tokyoSkyra01_space-other_T1w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Etienne Bergeron", - "Date": "2021-07-02 11:35:29" + "Date": "2021-07-02 11:35:29", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-tokyoSkyra01/anat/sub-tokyoSkyra01_space-other_T2star_label-SC_seg.json b/derivatives/labels/sub-tokyoSkyra01/anat/sub-tokyoSkyra01_space-other_T2star_label-SC_seg.json index a16370c08d..e481b1fc6c 100644 --- a/derivatives/labels/sub-tokyoSkyra01/anat/sub-tokyoSkyra01_space-other_T2star_label-SC_seg.json +++ b/derivatives/labels/sub-tokyoSkyra01/anat/sub-tokyoSkyra01_space-other_T2star_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:21" + "Date": "2021-06-08 15:06:21", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-tokyoSkyra01/anat/sub-tokyoSkyra01_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-tokyoSkyra01/anat/sub-tokyoSkyra01_space-other_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-tokyoSkyra01/anat/sub-tokyoSkyra01_space-other_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-tokyoSkyra01/anat/sub-tokyoSkyra01_space-other_T2w_label-SC_seg.json b/derivatives/labels/sub-tokyoSkyra01/anat/sub-tokyoSkyra01_space-other_T2w_label-SC_seg.json index 9812d65324..79b599e935 100644 --- a/derivatives/labels/sub-tokyoSkyra01/anat/sub-tokyoSkyra01_space-other_T2w_label-SC_seg.json +++ b/derivatives/labels/sub-tokyoSkyra01/anat/sub-tokyoSkyra01_space-other_T2w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Etienne Bergeron", - "Date": "2021-07-02 11:54:39" + "Date": "2021-07-02 11:54:39", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-tokyoSkyra01/dwi/sub-tokyoSkyra01_rec-average_dwi_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-tokyoSkyra01/dwi/sub-tokyoSkyra01_rec-average_dwi_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-tokyoSkyra01/dwi/sub-tokyoSkyra01_rec-average_dwi_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-tokyoSkyra02/anat/sub-tokyoSkyra02_flip-1_mt-on_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-tokyoSkyra02/anat/sub-tokyoSkyra02_flip-1_mt-on_space-other_MTS_label-SC_seg.json index a16370c08d..7752e96514 100644 --- a/derivatives/labels/sub-tokyoSkyra02/anat/sub-tokyoSkyra02_flip-1_mt-on_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-tokyoSkyra02/anat/sub-tokyoSkyra02_flip-1_mt-on_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:21" + "Date": "2021-06-08 15:06:21", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-tokyoSkyra02/anat/sub-tokyoSkyra02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-tokyoSkyra02/anat/sub-tokyoSkyra02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-tokyoSkyra02/anat/sub-tokyoSkyra02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-tokyoSkyra02/anat/sub-tokyoSkyra02_flip-2_mt-off_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-tokyoSkyra02/anat/sub-tokyoSkyra02_flip-2_mt-off_space-other_MTS_label-SC_seg.json index a16370c08d..7752e96514 100644 --- a/derivatives/labels/sub-tokyoSkyra02/anat/sub-tokyoSkyra02_flip-2_mt-off_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-tokyoSkyra02/anat/sub-tokyoSkyra02_flip-2_mt-off_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:21" + "Date": "2021-06-08 15:06:21", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-tokyoSkyra02/anat/sub-tokyoSkyra02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-tokyoSkyra02/anat/sub-tokyoSkyra02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-tokyoSkyra02/anat/sub-tokyoSkyra02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-tokyoSkyra02/anat/sub-tokyoSkyra02_space-other_T1w_label-SC_seg.json b/derivatives/labels/sub-tokyoSkyra02/anat/sub-tokyoSkyra02_space-other_T1w_label-SC_seg.json index 47e2a9c472..7efc01688c 100644 --- a/derivatives/labels/sub-tokyoSkyra02/anat/sub-tokyoSkyra02_space-other_T1w_label-SC_seg.json +++ b/derivatives/labels/sub-tokyoSkyra02/anat/sub-tokyoSkyra02_space-other_T1w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Etienne Bergeron", - "Date": "2021-07-02 11:43:23" + "Date": "2021-07-02 11:43:23", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-tokyoSkyra02/anat/sub-tokyoSkyra02_space-other_T2star_label-SC_seg.json b/derivatives/labels/sub-tokyoSkyra02/anat/sub-tokyoSkyra02_space-other_T2star_label-SC_seg.json index a16370c08d..e481b1fc6c 100644 --- a/derivatives/labels/sub-tokyoSkyra02/anat/sub-tokyoSkyra02_space-other_T2star_label-SC_seg.json +++ b/derivatives/labels/sub-tokyoSkyra02/anat/sub-tokyoSkyra02_space-other_T2star_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:21" + "Date": "2021-06-08 15:06:21", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-tokyoSkyra02/anat/sub-tokyoSkyra02_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-tokyoSkyra02/anat/sub-tokyoSkyra02_space-other_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-tokyoSkyra02/anat/sub-tokyoSkyra02_space-other_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-tokyoSkyra02/anat/sub-tokyoSkyra02_space-other_T2w_label-SC_seg.json b/derivatives/labels/sub-tokyoSkyra02/anat/sub-tokyoSkyra02_space-other_T2w_label-SC_seg.json index a2a9454e46..c267e38f40 100644 --- a/derivatives/labels/sub-tokyoSkyra02/anat/sub-tokyoSkyra02_space-other_T2w_label-SC_seg.json +++ b/derivatives/labels/sub-tokyoSkyra02/anat/sub-tokyoSkyra02_space-other_T2w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Etienne Bergeron", - "Date": "2021-07-02 13:13:07" + "Date": "2021-07-02 13:13:07", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-tokyoSkyra02/dwi/sub-tokyoSkyra02_rec-average_dwi_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-tokyoSkyra02/dwi/sub-tokyoSkyra02_rec-average_dwi_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-tokyoSkyra02/dwi/sub-tokyoSkyra02_rec-average_dwi_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-tokyoSkyra03/anat/sub-tokyoSkyra03_flip-1_mt-on_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-tokyoSkyra03/anat/sub-tokyoSkyra03_flip-1_mt-on_space-other_MTS_label-SC_seg.json index a16370c08d..7752e96514 100644 --- a/derivatives/labels/sub-tokyoSkyra03/anat/sub-tokyoSkyra03_flip-1_mt-on_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-tokyoSkyra03/anat/sub-tokyoSkyra03_flip-1_mt-on_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:21" + "Date": "2021-06-08 15:06:21", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-tokyoSkyra03/anat/sub-tokyoSkyra03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-tokyoSkyra03/anat/sub-tokyoSkyra03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-tokyoSkyra03/anat/sub-tokyoSkyra03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-tokyoSkyra03/anat/sub-tokyoSkyra03_flip-2_mt-off_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-tokyoSkyra03/anat/sub-tokyoSkyra03_flip-2_mt-off_space-other_MTS_label-SC_seg.json index effe931090..e1d9ad4128 100644 --- a/derivatives/labels/sub-tokyoSkyra03/anat/sub-tokyoSkyra03_flip-2_mt-off_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-tokyoSkyra03/anat/sub-tokyoSkyra03_flip-2_mt-off_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-08-03 15:59:45" + "Date": "2021-08-03 15:59:45", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-tokyoSkyra03/anat/sub-tokyoSkyra03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-tokyoSkyra03/anat/sub-tokyoSkyra03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-tokyoSkyra03/anat/sub-tokyoSkyra03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-tokyoSkyra03/anat/sub-tokyoSkyra03_space-other_T1w_label-SC_seg.json b/derivatives/labels/sub-tokyoSkyra03/anat/sub-tokyoSkyra03_space-other_T1w_label-SC_seg.json index 3e830bf0db..0f1109f529 100644 --- a/derivatives/labels/sub-tokyoSkyra03/anat/sub-tokyoSkyra03_space-other_T1w_label-SC_seg.json +++ b/derivatives/labels/sub-tokyoSkyra03/anat/sub-tokyoSkyra03_space-other_T1w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-03 10:35:23" + "Date": "2021-06-03 10:35:23", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-tokyoSkyra03/anat/sub-tokyoSkyra03_space-other_T2star_gmlabel-SC_seg.json b/derivatives/labels/sub-tokyoSkyra03/anat/sub-tokyoSkyra03_space-other_T2star_gmlabel-SC_seg.json index 3e830bf0db..58d47c5ed2 100644 --- a/derivatives/labels/sub-tokyoSkyra03/anat/sub-tokyoSkyra03_space-other_T2star_gmlabel-SC_seg.json +++ b/derivatives/labels/sub-tokyoSkyra03/anat/sub-tokyoSkyra03_space-other_T2star_gmlabel-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-03 10:35:23" + "Date": "2021-06-03 10:35:23", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-tokyoSkyra03/anat/sub-tokyoSkyra03_space-other_T2star_label-SC_seg.json b/derivatives/labels/sub-tokyoSkyra03/anat/sub-tokyoSkyra03_space-other_T2star_label-SC_seg.json index a16370c08d..e481b1fc6c 100644 --- a/derivatives/labels/sub-tokyoSkyra03/anat/sub-tokyoSkyra03_space-other_T2star_label-SC_seg.json +++ b/derivatives/labels/sub-tokyoSkyra03/anat/sub-tokyoSkyra03_space-other_T2star_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:21" + "Date": "2021-06-08 15:06:21", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-tokyoSkyra03/anat/sub-tokyoSkyra03_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-tokyoSkyra03/anat/sub-tokyoSkyra03_space-other_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-tokyoSkyra03/anat/sub-tokyoSkyra03_space-other_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-tokyoSkyra03/anat/sub-tokyoSkyra03_space-other_T2w_label-SC_seg.json b/derivatives/labels/sub-tokyoSkyra03/anat/sub-tokyoSkyra03_space-other_T2w_label-SC_seg.json index a16370c08d..3834a7469f 100644 --- a/derivatives/labels/sub-tokyoSkyra03/anat/sub-tokyoSkyra03_space-other_T2w_label-SC_seg.json +++ b/derivatives/labels/sub-tokyoSkyra03/anat/sub-tokyoSkyra03_space-other_T2w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:21" + "Date": "2021-06-08 15:06:21", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-tokyoSkyra03/dwi/sub-tokyoSkyra03_rec-average_dwi_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-tokyoSkyra03/dwi/sub-tokyoSkyra03_rec-average_dwi_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-tokyoSkyra03/dwi/sub-tokyoSkyra03_rec-average_dwi_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-tokyoSkyra04/anat/sub-tokyoSkyra04_flip-1_mt-on_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-tokyoSkyra04/anat/sub-tokyoSkyra04_flip-1_mt-on_space-other_MTS_label-SC_seg.json index a16370c08d..7752e96514 100644 --- a/derivatives/labels/sub-tokyoSkyra04/anat/sub-tokyoSkyra04_flip-1_mt-on_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-tokyoSkyra04/anat/sub-tokyoSkyra04_flip-1_mt-on_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:21" + "Date": "2021-06-08 15:06:21", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-tokyoSkyra04/anat/sub-tokyoSkyra04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-tokyoSkyra04/anat/sub-tokyoSkyra04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-tokyoSkyra04/anat/sub-tokyoSkyra04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-tokyoSkyra04/anat/sub-tokyoSkyra04_flip-2_mt-off_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-tokyoSkyra04/anat/sub-tokyoSkyra04_flip-2_mt-off_space-other_MTS_label-SC_seg.json index afc0f9d2b8..9975837fe2 100644 --- a/derivatives/labels/sub-tokyoSkyra04/anat/sub-tokyoSkyra04_flip-2_mt-off_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-tokyoSkyra04/anat/sub-tokyoSkyra04_flip-2_mt-off_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Etienne Bergeron", - "Date": "2021-07-02 13:33:51" + "Date": "2021-07-02 13:33:51", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-tokyoSkyra04/anat/sub-tokyoSkyra04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-tokyoSkyra04/anat/sub-tokyoSkyra04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-tokyoSkyra04/anat/sub-tokyoSkyra04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-tokyoSkyra04/anat/sub-tokyoSkyra04_space-other_T1w_label-SC_seg.json b/derivatives/labels/sub-tokyoSkyra04/anat/sub-tokyoSkyra04_space-other_T1w_label-SC_seg.json index a24a2336e4..bc279e0935 100644 --- a/derivatives/labels/sub-tokyoSkyra04/anat/sub-tokyoSkyra04_space-other_T1w_label-SC_seg.json +++ b/derivatives/labels/sub-tokyoSkyra04/anat/sub-tokyoSkyra04_space-other_T1w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Etienne Bergeron", - "Date": "2021-07-02 11:45:31" + "Date": "2021-07-02 11:45:31", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-tokyoSkyra04/anat/sub-tokyoSkyra04_space-other_T2star_gmlabel-SC_seg.json b/derivatives/labels/sub-tokyoSkyra04/anat/sub-tokyoSkyra04_space-other_T2star_gmlabel-SC_seg.json index 3e830bf0db..58d47c5ed2 100644 --- a/derivatives/labels/sub-tokyoSkyra04/anat/sub-tokyoSkyra04_space-other_T2star_gmlabel-SC_seg.json +++ b/derivatives/labels/sub-tokyoSkyra04/anat/sub-tokyoSkyra04_space-other_T2star_gmlabel-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-03 10:35:23" + "Date": "2021-06-03 10:35:23", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-tokyoSkyra04/anat/sub-tokyoSkyra04_space-other_T2star_label-SC_seg.json b/derivatives/labels/sub-tokyoSkyra04/anat/sub-tokyoSkyra04_space-other_T2star_label-SC_seg.json index a16370c08d..e481b1fc6c 100644 --- a/derivatives/labels/sub-tokyoSkyra04/anat/sub-tokyoSkyra04_space-other_T2star_label-SC_seg.json +++ b/derivatives/labels/sub-tokyoSkyra04/anat/sub-tokyoSkyra04_space-other_T2star_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:21" + "Date": "2021-06-08 15:06:21", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-tokyoSkyra04/anat/sub-tokyoSkyra04_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-tokyoSkyra04/anat/sub-tokyoSkyra04_space-other_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-tokyoSkyra04/anat/sub-tokyoSkyra04_space-other_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-tokyoSkyra04/anat/sub-tokyoSkyra04_space-other_T2w_label-SC_seg.json b/derivatives/labels/sub-tokyoSkyra04/anat/sub-tokyoSkyra04_space-other_T2w_label-SC_seg.json index a16370c08d..3834a7469f 100644 --- a/derivatives/labels/sub-tokyoSkyra04/anat/sub-tokyoSkyra04_space-other_T2w_label-SC_seg.json +++ b/derivatives/labels/sub-tokyoSkyra04/anat/sub-tokyoSkyra04_space-other_T2w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:21" + "Date": "2021-06-08 15:06:21", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-tokyoSkyra04/dwi/sub-tokyoSkyra04_rec-average_dwi_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-tokyoSkyra04/dwi/sub-tokyoSkyra04_rec-average_dwi_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-tokyoSkyra04/dwi/sub-tokyoSkyra04_rec-average_dwi_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-tokyoSkyra05/anat/sub-tokyoSkyra05_flip-1_mt-on_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-tokyoSkyra05/anat/sub-tokyoSkyra05_flip-1_mt-on_space-other_MTS_label-SC_seg.json index a16370c08d..7752e96514 100644 --- a/derivatives/labels/sub-tokyoSkyra05/anat/sub-tokyoSkyra05_flip-1_mt-on_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-tokyoSkyra05/anat/sub-tokyoSkyra05_flip-1_mt-on_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:21" + "Date": "2021-06-08 15:06:21", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-tokyoSkyra05/anat/sub-tokyoSkyra05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-tokyoSkyra05/anat/sub-tokyoSkyra05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-tokyoSkyra05/anat/sub-tokyoSkyra05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-tokyoSkyra05/anat/sub-tokyoSkyra05_flip-2_mt-off_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-tokyoSkyra05/anat/sub-tokyoSkyra05_flip-2_mt-off_space-other_MTS_label-SC_seg.json index f1955f7848..54cfb0a4ee 100644 --- a/derivatives/labels/sub-tokyoSkyra05/anat/sub-tokyoSkyra05_flip-2_mt-off_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-tokyoSkyra05/anat/sub-tokyoSkyra05_flip-2_mt-off_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Etienne Bergeron", - "Date": "2021-07-08 11:08:15" + "Date": "2021-07-08 11:08:15", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-tokyoSkyra05/anat/sub-tokyoSkyra05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-tokyoSkyra05/anat/sub-tokyoSkyra05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-tokyoSkyra05/anat/sub-tokyoSkyra05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-tokyoSkyra05/anat/sub-tokyoSkyra05_space-other_T1w_label-SC_seg.json b/derivatives/labels/sub-tokyoSkyra05/anat/sub-tokyoSkyra05_space-other_T1w_label-SC_seg.json index a9adebc3db..fa6b34c30c 100644 --- a/derivatives/labels/sub-tokyoSkyra05/anat/sub-tokyoSkyra05_space-other_T1w_label-SC_seg.json +++ b/derivatives/labels/sub-tokyoSkyra05/anat/sub-tokyoSkyra05_space-other_T1w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Etienne Bergeron", - "Date": "2021-07-02 14:55:55" + "Date": "2021-07-02 14:55:55", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-tokyoSkyra05/anat/sub-tokyoSkyra05_space-other_T2star_label-SC_seg.json b/derivatives/labels/sub-tokyoSkyra05/anat/sub-tokyoSkyra05_space-other_T2star_label-SC_seg.json index a16370c08d..e481b1fc6c 100644 --- a/derivatives/labels/sub-tokyoSkyra05/anat/sub-tokyoSkyra05_space-other_T2star_label-SC_seg.json +++ b/derivatives/labels/sub-tokyoSkyra05/anat/sub-tokyoSkyra05_space-other_T2star_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:21" + "Date": "2021-06-08 15:06:21", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-tokyoSkyra05/anat/sub-tokyoSkyra05_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-tokyoSkyra05/anat/sub-tokyoSkyra05_space-other_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-tokyoSkyra05/anat/sub-tokyoSkyra05_space-other_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-tokyoSkyra05/anat/sub-tokyoSkyra05_space-other_T2w_label-SC_seg.json b/derivatives/labels/sub-tokyoSkyra05/anat/sub-tokyoSkyra05_space-other_T2w_label-SC_seg.json index 54a5e281db..6660b2584d 100644 --- a/derivatives/labels/sub-tokyoSkyra05/anat/sub-tokyoSkyra05_space-other_T2w_label-SC_seg.json +++ b/derivatives/labels/sub-tokyoSkyra05/anat/sub-tokyoSkyra05_space-other_T2w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Etienne Bergeron", - "Date": "2021-07-08 10:26:28" + "Date": "2021-07-08 10:26:28", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-tokyoSkyra05/dwi/sub-tokyoSkyra05_rec-average_dwi_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-tokyoSkyra05/dwi/sub-tokyoSkyra05_rec-average_dwi_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-tokyoSkyra05/dwi/sub-tokyoSkyra05_rec-average_dwi_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-tokyoSkyra06/anat/sub-tokyoSkyra06_flip-1_mt-on_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-tokyoSkyra06/anat/sub-tokyoSkyra06_flip-1_mt-on_space-other_MTS_label-SC_seg.json index a2eb9804d6..8550f9af3d 100644 --- a/derivatives/labels/sub-tokyoSkyra06/anat/sub-tokyoSkyra06_flip-1_mt-on_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-tokyoSkyra06/anat/sub-tokyoSkyra06_flip-1_mt-on_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Etienne Bergeron", - "Date": "2021-07-08 12:58:26" + "Date": "2021-07-08 12:58:26", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-tokyoSkyra06/anat/sub-tokyoSkyra06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-tokyoSkyra06/anat/sub-tokyoSkyra06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-tokyoSkyra06/anat/sub-tokyoSkyra06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-tokyoSkyra06/anat/sub-tokyoSkyra06_flip-2_mt-off_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-tokyoSkyra06/anat/sub-tokyoSkyra06_flip-2_mt-off_space-other_MTS_label-SC_seg.json index 86bc85a2ef..bf4f7917ce 100644 --- a/derivatives/labels/sub-tokyoSkyra06/anat/sub-tokyoSkyra06_flip-2_mt-off_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-tokyoSkyra06/anat/sub-tokyoSkyra06_flip-2_mt-off_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Etienne Bergeron", - "Date": "2021-07-08 10:39:46" + "Date": "2021-07-08 10:39:46", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-tokyoSkyra06/anat/sub-tokyoSkyra06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-tokyoSkyra06/anat/sub-tokyoSkyra06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-tokyoSkyra06/anat/sub-tokyoSkyra06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-tokyoSkyra06/anat/sub-tokyoSkyra06_space-other_T1w_label-SC_seg.json b/derivatives/labels/sub-tokyoSkyra06/anat/sub-tokyoSkyra06_space-other_T1w_label-SC_seg.json index 42b3e3041b..8f1c52dc38 100644 --- a/derivatives/labels/sub-tokyoSkyra06/anat/sub-tokyoSkyra06_space-other_T1w_label-SC_seg.json +++ b/derivatives/labels/sub-tokyoSkyra06/anat/sub-tokyoSkyra06_space-other_T1w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Etienne Bergeron", - "Date": "2021-07-02 15:20:04" + "Date": "2021-07-02 15:20:04", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-tokyoSkyra06/anat/sub-tokyoSkyra06_space-other_T2star_label-SC_seg.json b/derivatives/labels/sub-tokyoSkyra06/anat/sub-tokyoSkyra06_space-other_T2star_label-SC_seg.json index a16370c08d..e481b1fc6c 100644 --- a/derivatives/labels/sub-tokyoSkyra06/anat/sub-tokyoSkyra06_space-other_T2star_label-SC_seg.json +++ b/derivatives/labels/sub-tokyoSkyra06/anat/sub-tokyoSkyra06_space-other_T2star_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:21" + "Date": "2021-06-08 15:06:21", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-tokyoSkyra06/anat/sub-tokyoSkyra06_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-tokyoSkyra06/anat/sub-tokyoSkyra06_space-other_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-tokyoSkyra06/anat/sub-tokyoSkyra06_space-other_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-tokyoSkyra06/anat/sub-tokyoSkyra06_space-other_T2w_label-SC_seg.json b/derivatives/labels/sub-tokyoSkyra06/anat/sub-tokyoSkyra06_space-other_T2w_label-SC_seg.json index a16370c08d..3834a7469f 100644 --- a/derivatives/labels/sub-tokyoSkyra06/anat/sub-tokyoSkyra06_space-other_T2w_label-SC_seg.json +++ b/derivatives/labels/sub-tokyoSkyra06/anat/sub-tokyoSkyra06_space-other_T2w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:21" + "Date": "2021-06-08 15:06:21", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-tokyoSkyra06/dwi/sub-tokyoSkyra06_rec-average_dwi_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-tokyoSkyra06/dwi/sub-tokyoSkyra06_rec-average_dwi_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-tokyoSkyra06/dwi/sub-tokyoSkyra06_rec-average_dwi_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-tokyoSkyra07/anat/sub-tokyoSkyra07_flip-1_mt-on_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-tokyoSkyra07/anat/sub-tokyoSkyra07_flip-1_mt-on_space-other_MTS_label-SC_seg.json index b5bd18b141..5f1fab1e3a 100644 --- a/derivatives/labels/sub-tokyoSkyra07/anat/sub-tokyoSkyra07_flip-1_mt-on_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-tokyoSkyra07/anat/sub-tokyoSkyra07_flip-1_mt-on_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Etienne Bergeron", - "Date": "2021-07-08 13:15:39" + "Date": "2021-07-08 13:15:39", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-tokyoSkyra07/anat/sub-tokyoSkyra07_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-tokyoSkyra07/anat/sub-tokyoSkyra07_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-tokyoSkyra07/anat/sub-tokyoSkyra07_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-tokyoSkyra07/anat/sub-tokyoSkyra07_flip-2_mt-off_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-tokyoSkyra07/anat/sub-tokyoSkyra07_flip-2_mt-off_space-other_MTS_label-SC_seg.json index fcf90a57f9..a421ee5f0c 100644 --- a/derivatives/labels/sub-tokyoSkyra07/anat/sub-tokyoSkyra07_flip-2_mt-off_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-tokyoSkyra07/anat/sub-tokyoSkyra07_flip-2_mt-off_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Etienne Bergeron", - "Date": "2021-07-08 11:12:13" + "Date": "2021-07-08 11:12:13", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-tokyoSkyra07/anat/sub-tokyoSkyra07_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-tokyoSkyra07/anat/sub-tokyoSkyra07_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-tokyoSkyra07/anat/sub-tokyoSkyra07_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-tokyoSkyra07/anat/sub-tokyoSkyra07_space-other_T1w_label-SC_seg.json b/derivatives/labels/sub-tokyoSkyra07/anat/sub-tokyoSkyra07_space-other_T1w_label-SC_seg.json index 6d7d730514..216ed66f78 100644 --- a/derivatives/labels/sub-tokyoSkyra07/anat/sub-tokyoSkyra07_space-other_T1w_label-SC_seg.json +++ b/derivatives/labels/sub-tokyoSkyra07/anat/sub-tokyoSkyra07_space-other_T1w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Etienne Bergeron", - "Date": "2021-07-02 15:25:25" + "Date": "2021-07-02 15:25:25", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-tokyoSkyra07/anat/sub-tokyoSkyra07_space-other_T2star_label-SC_seg.json b/derivatives/labels/sub-tokyoSkyra07/anat/sub-tokyoSkyra07_space-other_T2star_label-SC_seg.json index a16370c08d..e481b1fc6c 100644 --- a/derivatives/labels/sub-tokyoSkyra07/anat/sub-tokyoSkyra07_space-other_T2star_label-SC_seg.json +++ b/derivatives/labels/sub-tokyoSkyra07/anat/sub-tokyoSkyra07_space-other_T2star_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:21" + "Date": "2021-06-08 15:06:21", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-tokyoSkyra07/anat/sub-tokyoSkyra07_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-tokyoSkyra07/anat/sub-tokyoSkyra07_space-other_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-tokyoSkyra07/anat/sub-tokyoSkyra07_space-other_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-tokyoSkyra07/anat/sub-tokyoSkyra07_space-other_T2w_label-SC_seg.json b/derivatives/labels/sub-tokyoSkyra07/anat/sub-tokyoSkyra07_space-other_T2w_label-SC_seg.json index a16370c08d..3834a7469f 100644 --- a/derivatives/labels/sub-tokyoSkyra07/anat/sub-tokyoSkyra07_space-other_T2w_label-SC_seg.json +++ b/derivatives/labels/sub-tokyoSkyra07/anat/sub-tokyoSkyra07_space-other_T2w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:21" + "Date": "2021-06-08 15:06:21", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-tokyoSkyra07/dwi/sub-tokyoSkyra07_rec-average_dwi_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-tokyoSkyra07/dwi/sub-tokyoSkyra07_rec-average_dwi_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-tokyoSkyra07/dwi/sub-tokyoSkyra07_rec-average_dwi_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-ubc01/anat/sub-ubc01_flip-1_mt-on_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-ubc01/anat/sub-ubc01_flip-1_mt-on_space-other_MTS_label-SC_seg.json index a16370c08d..7752e96514 100644 --- a/derivatives/labels/sub-ubc01/anat/sub-ubc01_flip-1_mt-on_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-ubc01/anat/sub-ubc01_flip-1_mt-on_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:21" + "Date": "2021-06-08 15:06:21", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-ubc01/anat/sub-ubc01_space-other_T1w_label-SC_seg.json b/derivatives/labels/sub-ubc01/anat/sub-ubc01_space-other_T1w_label-SC_seg.json index 37631240db..59e901c7c8 100644 --- a/derivatives/labels/sub-ubc01/anat/sub-ubc01_space-other_T1w_label-SC_seg.json +++ b/derivatives/labels/sub-ubc01/anat/sub-ubc01_space-other_T1w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Etienne Bergeron", - "Date": "2021-07-02 14:49:47" + "Date": "2021-07-02 14:49:47", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-ubc01/anat/sub-ubc01_space-other_T2star_label-SC_seg.json b/derivatives/labels/sub-ubc01/anat/sub-ubc01_space-other_T2star_label-SC_seg.json index a16370c08d..e481b1fc6c 100644 --- a/derivatives/labels/sub-ubc01/anat/sub-ubc01_space-other_T2star_label-SC_seg.json +++ b/derivatives/labels/sub-ubc01/anat/sub-ubc01_space-other_T2star_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:21" + "Date": "2021-06-08 15:06:21", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-ubc01/anat/sub-ubc01_space-other_T2w_label-SC_seg.json b/derivatives/labels/sub-ubc01/anat/sub-ubc01_space-other_T2w_label-SC_seg.json index a16370c08d..3834a7469f 100644 --- a/derivatives/labels/sub-ubc01/anat/sub-ubc01_space-other_T2w_label-SC_seg.json +++ b/derivatives/labels/sub-ubc01/anat/sub-ubc01_space-other_T2w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:21" + "Date": "2021-06-08 15:06:21", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-ubc02/anat/sub-ubc02_flip-1_mt-on_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-ubc02/anat/sub-ubc02_flip-1_mt-on_space-other_MTS_label-SC_seg.json index abea432bdf..20ef49038d 100644 --- a/derivatives/labels/sub-ubc02/anat/sub-ubc02_flip-1_mt-on_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-ubc02/anat/sub-ubc02_flip-1_mt-on_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Etienne Bergeron", - "Date": "2021-07-08 11:09:44" + "Date": "2021-07-08 11:09:44", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-ubc02/anat/sub-ubc02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-ubc02/anat/sub-ubc02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-ubc02/anat/sub-ubc02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-ubc02/anat/sub-ubc02_flip-2_mt-off_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-ubc02/anat/sub-ubc02_flip-2_mt-off_space-other_MTS_label-SC_seg.json index bc1dd29e4f..2f81a0f524 100644 --- a/derivatives/labels/sub-ubc02/anat/sub-ubc02_flip-2_mt-off_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-ubc02/anat/sub-ubc02_flip-2_mt-off_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:22" + "Date": "2021-06-08 15:06:22", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-ubc02/anat/sub-ubc02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-ubc02/anat/sub-ubc02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-ubc02/anat/sub-ubc02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-ubc02/anat/sub-ubc02_space-other_T1w_label-SC_seg.json b/derivatives/labels/sub-ubc02/anat/sub-ubc02_space-other_T1w_label-SC_seg.json index e49a806103..0d11bd134f 100644 --- a/derivatives/labels/sub-ubc02/anat/sub-ubc02_space-other_T1w_label-SC_seg.json +++ b/derivatives/labels/sub-ubc02/anat/sub-ubc02_space-other_T1w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Etienne Bergeron", - "Date": "2021-07-02 14:36:41" + "Date": "2021-07-02 14:36:41", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-ubc02/anat/sub-ubc02_space-other_T2star_label-SC_seg.json b/derivatives/labels/sub-ubc02/anat/sub-ubc02_space-other_T2star_label-SC_seg.json index bc1dd29e4f..08eeb21e93 100644 --- a/derivatives/labels/sub-ubc02/anat/sub-ubc02_space-other_T2star_label-SC_seg.json +++ b/derivatives/labels/sub-ubc02/anat/sub-ubc02_space-other_T2star_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:22" + "Date": "2021-06-08 15:06:22", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-ubc02/anat/sub-ubc02_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-ubc02/anat/sub-ubc02_space-other_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-ubc02/anat/sub-ubc02_space-other_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-ubc02/anat/sub-ubc02_space-other_T2w_label-SC_seg.json b/derivatives/labels/sub-ubc02/anat/sub-ubc02_space-other_T2w_label-SC_seg.json index 7528c83fed..e9e03a9e8c 100644 --- a/derivatives/labels/sub-ubc02/anat/sub-ubc02_space-other_T2w_label-SC_seg.json +++ b/derivatives/labels/sub-ubc02/anat/sub-ubc02_space-other_T2w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Etienne Bergeron", - "Date": "2021-07-08 09:35:17" + "Date": "2021-07-08 09:35:17", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-ubc02/dwi/sub-ubc02_rec-average_dwi_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-ubc02/dwi/sub-ubc02_rec-average_dwi_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-ubc02/dwi/sub-ubc02_rec-average_dwi_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-ubc03/anat/sub-ubc03_flip-1_mt-on_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-ubc03/anat/sub-ubc03_flip-1_mt-on_space-other_MTS_label-SC_seg.json index bc1dd29e4f..2f81a0f524 100644 --- a/derivatives/labels/sub-ubc03/anat/sub-ubc03_flip-1_mt-on_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-ubc03/anat/sub-ubc03_flip-1_mt-on_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:22" + "Date": "2021-06-08 15:06:22", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-ubc03/anat/sub-ubc03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-ubc03/anat/sub-ubc03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-ubc03/anat/sub-ubc03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-ubc03/anat/sub-ubc03_flip-2_mt-off_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-ubc03/anat/sub-ubc03_flip-2_mt-off_space-other_MTS_label-SC_seg.json index bc1dd29e4f..2f81a0f524 100644 --- a/derivatives/labels/sub-ubc03/anat/sub-ubc03_flip-2_mt-off_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-ubc03/anat/sub-ubc03_flip-2_mt-off_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:22" + "Date": "2021-06-08 15:06:22", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-ubc03/anat/sub-ubc03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-ubc03/anat/sub-ubc03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-ubc03/anat/sub-ubc03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-ubc03/anat/sub-ubc03_space-other_T1w_label-SC_seg.json b/derivatives/labels/sub-ubc03/anat/sub-ubc03_space-other_T1w_label-SC_seg.json index 143c5656be..e35bc56528 100644 --- a/derivatives/labels/sub-ubc03/anat/sub-ubc03_space-other_T1w_label-SC_seg.json +++ b/derivatives/labels/sub-ubc03/anat/sub-ubc03_space-other_T1w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Etienne Bergeron", - "Date": "2021-07-02 14:28:13" + "Date": "2021-07-02 14:28:13", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-ubc03/anat/sub-ubc03_space-other_T2star_label-SC_seg.json b/derivatives/labels/sub-ubc03/anat/sub-ubc03_space-other_T2star_label-SC_seg.json index bc1dd29e4f..08eeb21e93 100644 --- a/derivatives/labels/sub-ubc03/anat/sub-ubc03_space-other_T2star_label-SC_seg.json +++ b/derivatives/labels/sub-ubc03/anat/sub-ubc03_space-other_T2star_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:22" + "Date": "2021-06-08 15:06:22", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-ubc03/anat/sub-ubc03_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-ubc03/anat/sub-ubc03_space-other_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-ubc03/anat/sub-ubc03_space-other_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-ubc03/anat/sub-ubc03_space-other_T2w_label-SC_seg.json b/derivatives/labels/sub-ubc03/anat/sub-ubc03_space-other_T2w_label-SC_seg.json index ff1a6622cd..d8cad46288 100644 --- a/derivatives/labels/sub-ubc03/anat/sub-ubc03_space-other_T2w_label-SC_seg.json +++ b/derivatives/labels/sub-ubc03/anat/sub-ubc03_space-other_T2w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Etienne Bergeron", - "Date": "2021-07-03 15:26:36" + "Date": "2021-07-03 15:26:36", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-ubc03/dwi/sub-ubc03_rec-average_dwi_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-ubc03/dwi/sub-ubc03_rec-average_dwi_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-ubc03/dwi/sub-ubc03_rec-average_dwi_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-ubc04/anat/sub-ubc04_flip-1_mt-on_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-ubc04/anat/sub-ubc04_flip-1_mt-on_space-other_MTS_label-SC_seg.json index e8e47f3126..841072ca30 100644 --- a/derivatives/labels/sub-ubc04/anat/sub-ubc04_flip-1_mt-on_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-ubc04/anat/sub-ubc04_flip-1_mt-on_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Etienne Bergeron", - "Date": "2021-07-08 10:28:13" + "Date": "2021-07-08 10:28:13", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-ubc04/anat/sub-ubc04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-ubc04/anat/sub-ubc04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-ubc04/anat/sub-ubc04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-ubc04/anat/sub-ubc04_flip-2_mt-off_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-ubc04/anat/sub-ubc04_flip-2_mt-off_space-other_MTS_label-SC_seg.json index bc1dd29e4f..2f81a0f524 100644 --- a/derivatives/labels/sub-ubc04/anat/sub-ubc04_flip-2_mt-off_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-ubc04/anat/sub-ubc04_flip-2_mt-off_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:22" + "Date": "2021-06-08 15:06:22", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-ubc04/anat/sub-ubc04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-ubc04/anat/sub-ubc04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-ubc04/anat/sub-ubc04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-ubc04/anat/sub-ubc04_space-other_T1w_label-SC_seg.json b/derivatives/labels/sub-ubc04/anat/sub-ubc04_space-other_T1w_label-SC_seg.json index b8e21d6fd4..a041e88982 100644 --- a/derivatives/labels/sub-ubc04/anat/sub-ubc04_space-other_T1w_label-SC_seg.json +++ b/derivatives/labels/sub-ubc04/anat/sub-ubc04_space-other_T1w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Etienne Bergeron", - "Date": "2021-07-02 13:39:07" + "Date": "2021-07-02 13:39:07", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-ubc04/anat/sub-ubc04_space-other_T2star_label-SC_seg.json b/derivatives/labels/sub-ubc04/anat/sub-ubc04_space-other_T2star_label-SC_seg.json index bc1dd29e4f..08eeb21e93 100644 --- a/derivatives/labels/sub-ubc04/anat/sub-ubc04_space-other_T2star_label-SC_seg.json +++ b/derivatives/labels/sub-ubc04/anat/sub-ubc04_space-other_T2star_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:22" + "Date": "2021-06-08 15:06:22", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-ubc04/anat/sub-ubc04_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-ubc04/anat/sub-ubc04_space-other_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-ubc04/anat/sub-ubc04_space-other_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-ubc04/anat/sub-ubc04_space-other_T2w_label-SC_seg.json b/derivatives/labels/sub-ubc04/anat/sub-ubc04_space-other_T2w_label-SC_seg.json index 3fc50d768d..e773bfd790 100644 --- a/derivatives/labels/sub-ubc04/anat/sub-ubc04_space-other_T2w_label-SC_seg.json +++ b/derivatives/labels/sub-ubc04/anat/sub-ubc04_space-other_T2w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Etienne Bergeron", - "Date": "2021-07-03 15:08:00" + "Date": "2021-07-03 15:08:00", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-ubc04/dwi/sub-ubc04_rec-average_dwi_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-ubc04/dwi/sub-ubc04_rec-average_dwi_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-ubc04/dwi/sub-ubc04_rec-average_dwi_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-ubc05/anat/sub-ubc05_flip-1_mt-on_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-ubc05/anat/sub-ubc05_flip-1_mt-on_space-other_MTS_label-SC_seg.json index 3cdd11f82b..13c34bedbc 100644 --- a/derivatives/labels/sub-ubc05/anat/sub-ubc05_flip-1_mt-on_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-ubc05/anat/sub-ubc05_flip-1_mt-on_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Etienne Bergeron", - "Date": "2021-07-08 11:12:53" + "Date": "2021-07-08 11:12:53", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-ubc05/anat/sub-ubc05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-ubc05/anat/sub-ubc05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-ubc05/anat/sub-ubc05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-ubc05/anat/sub-ubc05_flip-2_mt-off_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-ubc05/anat/sub-ubc05_flip-2_mt-off_space-other_MTS_label-SC_seg.json index bc1dd29e4f..2f81a0f524 100644 --- a/derivatives/labels/sub-ubc05/anat/sub-ubc05_flip-2_mt-off_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-ubc05/anat/sub-ubc05_flip-2_mt-off_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:22" + "Date": "2021-06-08 15:06:22", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-ubc05/anat/sub-ubc05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-ubc05/anat/sub-ubc05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-ubc05/anat/sub-ubc05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-ubc05/anat/sub-ubc05_space-other_T1w_label-SC_seg.json b/derivatives/labels/sub-ubc05/anat/sub-ubc05_space-other_T1w_label-SC_seg.json index 7841effbae..87f02aa7c8 100644 --- a/derivatives/labels/sub-ubc05/anat/sub-ubc05_space-other_T1w_label-SC_seg.json +++ b/derivatives/labels/sub-ubc05/anat/sub-ubc05_space-other_T1w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Etienne Bergeron", - "Date": "2021-07-02 15:12:29" + "Date": "2021-07-02 15:12:29", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-ubc05/anat/sub-ubc05_space-other_T2star_label-SC_seg.json b/derivatives/labels/sub-ubc05/anat/sub-ubc05_space-other_T2star_label-SC_seg.json index bc1dd29e4f..08eeb21e93 100644 --- a/derivatives/labels/sub-ubc05/anat/sub-ubc05_space-other_T2star_label-SC_seg.json +++ b/derivatives/labels/sub-ubc05/anat/sub-ubc05_space-other_T2star_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:22" + "Date": "2021-06-08 15:06:22", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-ubc05/anat/sub-ubc05_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-ubc05/anat/sub-ubc05_space-other_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-ubc05/anat/sub-ubc05_space-other_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-ubc05/anat/sub-ubc05_space-other_T2w_label-SC_seg.json b/derivatives/labels/sub-ubc05/anat/sub-ubc05_space-other_T2w_label-SC_seg.json index d14f7df3a9..255f524edb 100644 --- a/derivatives/labels/sub-ubc05/anat/sub-ubc05_space-other_T2w_label-SC_seg.json +++ b/derivatives/labels/sub-ubc05/anat/sub-ubc05_space-other_T2w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Etienne Bergeron", - "Date": "2021-07-08 09:38:56" + "Date": "2021-07-08 09:38:56", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-ubc05/dwi/sub-ubc05_rec-average_dwi_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-ubc05/dwi/sub-ubc05_rec-average_dwi_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-ubc05/dwi/sub-ubc05_rec-average_dwi_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-ubc06/anat/sub-ubc06_flip-1_mt-on_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-ubc06/anat/sub-ubc06_flip-1_mt-on_space-other_MTS_label-SC_seg.json index bc1dd29e4f..2f81a0f524 100644 --- a/derivatives/labels/sub-ubc06/anat/sub-ubc06_flip-1_mt-on_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-ubc06/anat/sub-ubc06_flip-1_mt-on_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:22" + "Date": "2021-06-08 15:06:22", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-ubc06/anat/sub-ubc06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-ubc06/anat/sub-ubc06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-ubc06/anat/sub-ubc06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-ubc06/anat/sub-ubc06_flip-2_mt-off_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-ubc06/anat/sub-ubc06_flip-2_mt-off_space-other_MTS_label-SC_seg.json index bc1dd29e4f..2f81a0f524 100644 --- a/derivatives/labels/sub-ubc06/anat/sub-ubc06_flip-2_mt-off_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-ubc06/anat/sub-ubc06_flip-2_mt-off_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:22" + "Date": "2021-06-08 15:06:22", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-ubc06/anat/sub-ubc06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-ubc06/anat/sub-ubc06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-ubc06/anat/sub-ubc06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-ubc06/anat/sub-ubc06_space-other_T1w_label-SC_seg.json b/derivatives/labels/sub-ubc06/anat/sub-ubc06_space-other_T1w_label-SC_seg.json index d1c5be764b..59b08caaac 100644 --- a/derivatives/labels/sub-ubc06/anat/sub-ubc06_space-other_T1w_label-SC_seg.json +++ b/derivatives/labels/sub-ubc06/anat/sub-ubc06_space-other_T1w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Etienne Bergeron", - "Date": "2021-07-02 15:03:19" + "Date": "2021-07-02 15:03:19", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-ubc06/anat/sub-ubc06_space-other_T2star_label-SC_seg.json b/derivatives/labels/sub-ubc06/anat/sub-ubc06_space-other_T2star_label-SC_seg.json index bc1dd29e4f..08eeb21e93 100644 --- a/derivatives/labels/sub-ubc06/anat/sub-ubc06_space-other_T2star_label-SC_seg.json +++ b/derivatives/labels/sub-ubc06/anat/sub-ubc06_space-other_T2star_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:22" + "Date": "2021-06-08 15:06:22", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-ubc06/anat/sub-ubc06_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-ubc06/anat/sub-ubc06_space-other_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-ubc06/anat/sub-ubc06_space-other_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-ubc06/anat/sub-ubc06_space-other_T2w_label-SC_seg.json b/derivatives/labels/sub-ubc06/anat/sub-ubc06_space-other_T2w_label-SC_seg.json index 0d2b7b85d8..ee781508fe 100644 --- a/derivatives/labels/sub-ubc06/anat/sub-ubc06_space-other_T2w_label-SC_seg.json +++ b/derivatives/labels/sub-ubc06/anat/sub-ubc06_space-other_T2w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Etienne Bergeron", - "Date": "2021-07-08 10:23:56" + "Date": "2021-07-08 10:23:56", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-ubc06/dwi/sub-ubc06_rec-average_dwi_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-ubc06/dwi/sub-ubc06_rec-average_dwi_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-ubc06/dwi/sub-ubc06_rec-average_dwi_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-ucdavis01/anat/sub-ucdavis01_flip-1_mt-on_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-ucdavis01/anat/sub-ucdavis01_flip-1_mt-on_space-other_MTS_label-SC_seg.json index bc1dd29e4f..2f81a0f524 100644 --- a/derivatives/labels/sub-ucdavis01/anat/sub-ucdavis01_flip-1_mt-on_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-ucdavis01/anat/sub-ucdavis01_flip-1_mt-on_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:22" + "Date": "2021-06-08 15:06:22", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-ucdavis01/anat/sub-ucdavis01_flip-2_mt-off_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-ucdavis01/anat/sub-ucdavis01_flip-2_mt-off_space-other_MTS_label-SC_seg.json index bc1dd29e4f..2f81a0f524 100644 --- a/derivatives/labels/sub-ucdavis01/anat/sub-ucdavis01_flip-2_mt-off_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-ucdavis01/anat/sub-ucdavis01_flip-2_mt-off_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:22" + "Date": "2021-06-08 15:06:22", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-ucdavis01/anat/sub-ucdavis01_space-other_T1w_label-SC_seg.json b/derivatives/labels/sub-ucdavis01/anat/sub-ucdavis01_space-other_T1w_label-SC_seg.json index 0e6fe5d06f..6ed50894a0 100644 --- a/derivatives/labels/sub-ucdavis01/anat/sub-ucdavis01_space-other_T1w_label-SC_seg.json +++ b/derivatives/labels/sub-ucdavis01/anat/sub-ucdavis01_space-other_T1w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Etienne Bergeron", - "Date": "2021-07-02 13:54:04" + "Date": "2021-07-02 13:54:04", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-ucdavis01/anat/sub-ucdavis01_space-other_T2star_label-SC_seg.json b/derivatives/labels/sub-ucdavis01/anat/sub-ucdavis01_space-other_T2star_label-SC_seg.json index bc1dd29e4f..08eeb21e93 100644 --- a/derivatives/labels/sub-ucdavis01/anat/sub-ucdavis01_space-other_T2star_label-SC_seg.json +++ b/derivatives/labels/sub-ucdavis01/anat/sub-ucdavis01_space-other_T2star_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:22" + "Date": "2021-06-08 15:06:22", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-ucdavis01/anat/sub-ucdavis01_space-other_T2w_label-SC_seg.json b/derivatives/labels/sub-ucdavis01/anat/sub-ucdavis01_space-other_T2w_label-SC_seg.json index 5ad0cc317e..ae4b2bf006 100644 --- a/derivatives/labels/sub-ucdavis01/anat/sub-ucdavis01_space-other_T2w_label-SC_seg.json +++ b/derivatives/labels/sub-ucdavis01/anat/sub-ucdavis01_space-other_T2w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Etienne Bergeron", - "Date": "2021-07-03 15:23:22" + "Date": "2021-07-03 15:23:22", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-ucdavis02/anat/sub-ucdavis02_flip-1_mt-on_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-ucdavis02/anat/sub-ucdavis02_flip-1_mt-on_space-other_MTS_label-SC_seg.json index bc1dd29e4f..2f81a0f524 100644 --- a/derivatives/labels/sub-ucdavis02/anat/sub-ucdavis02_flip-1_mt-on_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-ucdavis02/anat/sub-ucdavis02_flip-1_mt-on_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:22" + "Date": "2021-06-08 15:06:22", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-ucdavis02/anat/sub-ucdavis02_flip-2_mt-off_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-ucdavis02/anat/sub-ucdavis02_flip-2_mt-off_space-other_MTS_label-SC_seg.json index bc1dd29e4f..2f81a0f524 100644 --- a/derivatives/labels/sub-ucdavis02/anat/sub-ucdavis02_flip-2_mt-off_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-ucdavis02/anat/sub-ucdavis02_flip-2_mt-off_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:22" + "Date": "2021-06-08 15:06:22", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-ucdavis02/anat/sub-ucdavis02_space-other_T1w_label-SC_seg.json b/derivatives/labels/sub-ucdavis02/anat/sub-ucdavis02_space-other_T1w_label-SC_seg.json index 4b50fb25ae..d0c5f4d497 100644 --- a/derivatives/labels/sub-ucdavis02/anat/sub-ucdavis02_space-other_T1w_label-SC_seg.json +++ b/derivatives/labels/sub-ucdavis02/anat/sub-ucdavis02_space-other_T1w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Etienne Bergeron", - "Date": "2021-07-02 14:43:02" + "Date": "2021-07-02 14:43:02", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-ucdavis02/anat/sub-ucdavis02_space-other_T2star_label-SC_seg.json b/derivatives/labels/sub-ucdavis02/anat/sub-ucdavis02_space-other_T2star_label-SC_seg.json index aae16f2314..e10a9f60b4 100644 --- a/derivatives/labels/sub-ucdavis02/anat/sub-ucdavis02_space-other_T2star_label-SC_seg.json +++ b/derivatives/labels/sub-ucdavis02/anat/sub-ucdavis02_space-other_T2star_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Etienne Bergeron", - "Date": "2021-07-08 13:05:54" + "Date": "2021-07-08 13:05:54", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-ucdavis02/anat/sub-ucdavis02_space-other_T2w_label-SC_seg.json b/derivatives/labels/sub-ucdavis02/anat/sub-ucdavis02_space-other_T2w_label-SC_seg.json index bf55280978..f1dc95eb83 100644 --- a/derivatives/labels/sub-ucdavis02/anat/sub-ucdavis02_space-other_T2w_label-SC_seg.json +++ b/derivatives/labels/sub-ucdavis02/anat/sub-ucdavis02_space-other_T2w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Etienne Bergeron", - "Date": "2021-07-08 08:43:33" + "Date": "2021-07-08 08:43:33", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-ucdavis03/anat/sub-ucdavis03_flip-1_mt-on_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-ucdavis03/anat/sub-ucdavis03_flip-1_mt-on_space-other_MTS_label-SC_seg.json index 2685be9a2f..09edf47de8 100644 --- a/derivatives/labels/sub-ucdavis03/anat/sub-ucdavis03_flip-1_mt-on_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-ucdavis03/anat/sub-ucdavis03_flip-1_mt-on_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-08-17 15:13:19" -} + "Date": "2022-08-17 15:13:19", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/labels/sub-ucdavis03/anat/sub-ucdavis03_space-other_T1w_label-SC_seg.json b/derivatives/labels/sub-ucdavis03/anat/sub-ucdavis03_space-other_T1w_label-SC_seg.json index e5aabc2a28..93edbb6b2c 100644 --- a/derivatives/labels/sub-ucdavis03/anat/sub-ucdavis03_space-other_T1w_label-SC_seg.json +++ b/derivatives/labels/sub-ucdavis03/anat/sub-ucdavis03_space-other_T1w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Etienne Bergeron", - "Date": "2021-07-02 14:33:05" + "Date": "2021-07-02 14:33:05", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-ucdavis03/anat/sub-ucdavis03_space-other_T2star_label-SC_seg.json b/derivatives/labels/sub-ucdavis03/anat/sub-ucdavis03_space-other_T2star_label-SC_seg.json index 2685be9a2f..859c38c841 100644 --- a/derivatives/labels/sub-ucdavis03/anat/sub-ucdavis03_space-other_T2star_label-SC_seg.json +++ b/derivatives/labels/sub-ucdavis03/anat/sub-ucdavis03_space-other_T2star_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-08-17 15:13:19" -} + "Date": "2022-08-17 15:13:19", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } +} \ No newline at end of file diff --git a/derivatives/labels/sub-ucdavis03/anat/sub-ucdavis03_space-other_T2w_label-SC_seg.json b/derivatives/labels/sub-ucdavis03/anat/sub-ucdavis03_space-other_T2w_label-SC_seg.json index cb31050867..7ba581a59a 100644 --- a/derivatives/labels/sub-ucdavis03/anat/sub-ucdavis03_space-other_T2w_label-SC_seg.json +++ b/derivatives/labels/sub-ucdavis03/anat/sub-ucdavis03_space-other_T2w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Etienne Bergeron", - "Date": "2021-07-03 15:13:19" + "Date": "2021-07-03 15:13:19", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-ucdavis04/anat/sub-ucdavis04_flip-1_mt-on_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-ucdavis04/anat/sub-ucdavis04_flip-1_mt-on_space-other_MTS_label-SC_seg.json index 2fc9e6c103..5813c12ebe 100644 --- a/derivatives/labels/sub-ucdavis04/anat/sub-ucdavis04_flip-1_mt-on_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-ucdavis04/anat/sub-ucdavis04_flip-1_mt-on_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:23" + "Date": "2021-06-08 15:06:23", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-ucdavis04/anat/sub-ucdavis04_flip-2_mt-off_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-ucdavis04/anat/sub-ucdavis04_flip-2_mt-off_space-other_MTS_label-SC_seg.json index cea5519b5f..0b83a5e5aa 100644 --- a/derivatives/labels/sub-ucdavis04/anat/sub-ucdavis04_flip-2_mt-off_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-ucdavis04/anat/sub-ucdavis04_flip-2_mt-off_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Etienne Bergeron", - "Date": "2021-07-08 11:15:14" + "Date": "2021-07-08 11:15:14", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-ucdavis04/anat/sub-ucdavis04_space-other_T1w_label-SC_seg.json b/derivatives/labels/sub-ucdavis04/anat/sub-ucdavis04_space-other_T1w_label-SC_seg.json index 2fc9e6c103..d7f8366234 100644 --- a/derivatives/labels/sub-ucdavis04/anat/sub-ucdavis04_space-other_T1w_label-SC_seg.json +++ b/derivatives/labels/sub-ucdavis04/anat/sub-ucdavis04_space-other_T1w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:23" + "Date": "2021-06-08 15:06:23", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-ucdavis04/anat/sub-ucdavis04_space-other_T2star_label-SC_seg.json b/derivatives/labels/sub-ucdavis04/anat/sub-ucdavis04_space-other_T2star_label-SC_seg.json index 2fc9e6c103..795de5af56 100644 --- a/derivatives/labels/sub-ucdavis04/anat/sub-ucdavis04_space-other_T2star_label-SC_seg.json +++ b/derivatives/labels/sub-ucdavis04/anat/sub-ucdavis04_space-other_T2star_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:23" + "Date": "2021-06-08 15:06:23", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-ucdavis04/anat/sub-ucdavis04_space-other_T2w_label-SC_seg.json b/derivatives/labels/sub-ucdavis04/anat/sub-ucdavis04_space-other_T2w_label-SC_seg.json index 1892bae272..53d43c7a58 100644 --- a/derivatives/labels/sub-ucdavis04/anat/sub-ucdavis04_space-other_T2w_label-SC_seg.json +++ b/derivatives/labels/sub-ucdavis04/anat/sub-ucdavis04_space-other_T2w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Etienne Bergeron", - "Date": "2021-07-08 10:46:11" + "Date": "2021-07-08 10:46:11", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-ucdavis05/anat/sub-ucdavis05_flip-1_mt-on_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-ucdavis05/anat/sub-ucdavis05_flip-1_mt-on_space-other_MTS_label-SC_seg.json index 2fc9e6c103..5813c12ebe 100644 --- a/derivatives/labels/sub-ucdavis05/anat/sub-ucdavis05_flip-1_mt-on_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-ucdavis05/anat/sub-ucdavis05_flip-1_mt-on_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:23" + "Date": "2021-06-08 15:06:23", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-ucdavis05/anat/sub-ucdavis05_space-other_T1w_label-SC_seg.json b/derivatives/labels/sub-ucdavis05/anat/sub-ucdavis05_space-other_T1w_label-SC_seg.json index b12e4506c9..b7c265890f 100644 --- a/derivatives/labels/sub-ucdavis05/anat/sub-ucdavis05_space-other_T1w_label-SC_seg.json +++ b/derivatives/labels/sub-ucdavis05/anat/sub-ucdavis05_space-other_T1w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Etienne Bergeron", - "Date": "2021-07-02 15:33:45" + "Date": "2021-07-02 15:33:45", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-ucdavis05/anat/sub-ucdavis05_space-other_T2star_label-SC_seg.json b/derivatives/labels/sub-ucdavis05/anat/sub-ucdavis05_space-other_T2star_label-SC_seg.json index 2fc9e6c103..795de5af56 100644 --- a/derivatives/labels/sub-ucdavis05/anat/sub-ucdavis05_space-other_T2star_label-SC_seg.json +++ b/derivatives/labels/sub-ucdavis05/anat/sub-ucdavis05_space-other_T2star_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:23" + "Date": "2021-06-08 15:06:23", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-ucdavis05/anat/sub-ucdavis05_space-other_T2w_label-SC_seg.json b/derivatives/labels/sub-ucdavis05/anat/sub-ucdavis05_space-other_T2w_label-SC_seg.json index 2fc9e6c103..0e9e6a8851 100644 --- a/derivatives/labels/sub-ucdavis05/anat/sub-ucdavis05_space-other_T2w_label-SC_seg.json +++ b/derivatives/labels/sub-ucdavis05/anat/sub-ucdavis05_space-other_T2w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:23" + "Date": "2021-06-08 15:06:23", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-ucdavis06/anat/sub-ucdavis06_flip-1_mt-on_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-ucdavis06/anat/sub-ucdavis06_flip-1_mt-on_space-other_MTS_label-SC_seg.json index 08a9a1f914..c5ba52cc38 100644 --- a/derivatives/labels/sub-ucdavis06/anat/sub-ucdavis06_flip-1_mt-on_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-ucdavis06/anat/sub-ucdavis06_flip-1_mt-on_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Etienne Bergeron", - "Date": "2021-07-08 10:57:47" + "Date": "2021-07-08 10:57:47", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-ucdavis06/anat/sub-ucdavis06_space-other_T1w_label-SC_seg.json b/derivatives/labels/sub-ucdavis06/anat/sub-ucdavis06_space-other_T1w_label-SC_seg.json index f5f5415a65..0076cae0e3 100644 --- a/derivatives/labels/sub-ucdavis06/anat/sub-ucdavis06_space-other_T1w_label-SC_seg.json +++ b/derivatives/labels/sub-ucdavis06/anat/sub-ucdavis06_space-other_T1w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Etienne Bergeron", - "Date": "2021-07-02 15:39:07" + "Date": "2021-07-02 15:39:07", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-ucdavis06/anat/sub-ucdavis06_space-other_T2star_label-SC_seg.json b/derivatives/labels/sub-ucdavis06/anat/sub-ucdavis06_space-other_T2star_label-SC_seg.json index 08a9a1f914..b6ac8b31ff 100644 --- a/derivatives/labels/sub-ucdavis06/anat/sub-ucdavis06_space-other_T2star_label-SC_seg.json +++ b/derivatives/labels/sub-ucdavis06/anat/sub-ucdavis06_space-other_T2star_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Etienne Bergeron", - "Date": "2021-07-08 10:57:47" + "Date": "2021-07-08 10:57:47", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-ucdavis06/anat/sub-ucdavis06_space-other_T2w_label-SC_seg.json b/derivatives/labels/sub-ucdavis06/anat/sub-ucdavis06_space-other_T2w_label-SC_seg.json index 08a9a1f914..c74f41fcf3 100644 --- a/derivatives/labels/sub-ucdavis06/anat/sub-ucdavis06_space-other_T2w_label-SC_seg.json +++ b/derivatives/labels/sub-ucdavis06/anat/sub-ucdavis06_space-other_T2w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Etienne Bergeron", - "Date": "2021-07-08 10:57:47" + "Date": "2021-07-08 10:57:47", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-ucdavis07/anat/sub-ucdavis07_flip-1_mt-on_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-ucdavis07/anat/sub-ucdavis07_flip-1_mt-on_space-other_MTS_label-SC_seg.json index 882641a0ff..72a0c1e921 100644 --- a/derivatives/labels/sub-ucdavis07/anat/sub-ucdavis07_flip-1_mt-on_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-ucdavis07/anat/sub-ucdavis07_flip-1_mt-on_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-08-18 13:30:48" -} + "Date": "2022-08-18 13:30:48", + "SpatialReference": { + "Reorientation": "RPI" + } +} \ No newline at end of file diff --git a/derivatives/labels/sub-ucdavis07/anat/sub-ucdavis07_space-other_T1w_label-SC_seg.json b/derivatives/labels/sub-ucdavis07/anat/sub-ucdavis07_space-other_T1w_label-SC_seg.json index 45d19061e0..62b6eb9900 100644 --- a/derivatives/labels/sub-ucdavis07/anat/sub-ucdavis07_space-other_T1w_label-SC_seg.json +++ b/derivatives/labels/sub-ucdavis07/anat/sub-ucdavis07_space-other_T1w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Etienne Bergeron", - "Date": "2021-07-02 11:46:55" + "Date": "2021-07-02 11:46:55", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-ucdavis07/anat/sub-ucdavis07_space-other_T2star_label-SC_seg.json b/derivatives/labels/sub-ucdavis07/anat/sub-ucdavis07_space-other_T2star_label-SC_seg.json index 882641a0ff..87e393efd3 100644 --- a/derivatives/labels/sub-ucdavis07/anat/sub-ucdavis07_space-other_T2star_label-SC_seg.json +++ b/derivatives/labels/sub-ucdavis07/anat/sub-ucdavis07_space-other_T2star_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-08-18 13:30:48" -} + "Date": "2022-08-18 13:30:48", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } +} \ No newline at end of file diff --git a/derivatives/labels/sub-ucdavis07/anat/sub-ucdavis07_space-other_T2w_label-SC_seg.json b/derivatives/labels/sub-ucdavis07/anat/sub-ucdavis07_space-other_T2w_label-SC_seg.json index b4a483cf20..2d7cfb8e36 100644 --- a/derivatives/labels/sub-ucdavis07/anat/sub-ucdavis07_space-other_T2w_label-SC_seg.json +++ b/derivatives/labels/sub-ucdavis07/anat/sub-ucdavis07_space-other_T2w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Etienne Bergeron", - "Date": "2021-07-02 13:30:48" + "Date": "2021-07-02 13:30:48", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-ucl01/anat/sub-ucl01_flip-1_mt-on_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-ucl01/anat/sub-ucl01_flip-1_mt-on_space-other_MTS_label-SC_seg.json index 2fc9e6c103..5813c12ebe 100644 --- a/derivatives/labels/sub-ucl01/anat/sub-ucl01_flip-1_mt-on_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-ucl01/anat/sub-ucl01_flip-1_mt-on_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:23" + "Date": "2021-06-08 15:06:23", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-ucl01/anat/sub-ucl01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-ucl01/anat/sub-ucl01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-ucl01/anat/sub-ucl01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-ucl01/anat/sub-ucl01_flip-2_mt-off_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-ucl01/anat/sub-ucl01_flip-2_mt-off_space-other_MTS_label-SC_seg.json index 2fc9e6c103..5813c12ebe 100644 --- a/derivatives/labels/sub-ucl01/anat/sub-ucl01_flip-2_mt-off_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-ucl01/anat/sub-ucl01_flip-2_mt-off_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:23" + "Date": "2021-06-08 15:06:23", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-ucl01/anat/sub-ucl01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-ucl01/anat/sub-ucl01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-ucl01/anat/sub-ucl01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-ucl01/anat/sub-ucl01_space-other_T1w_label-SC_seg.json b/derivatives/labels/sub-ucl01/anat/sub-ucl01_space-other_T1w_label-SC_seg.json index a25872b333..5386b6a5e6 100644 --- a/derivatives/labels/sub-ucl01/anat/sub-ucl01_space-other_T1w_label-SC_seg.json +++ b/derivatives/labels/sub-ucl01/anat/sub-ucl01_space-other_T1w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Etienne Bergeron", - "Date": "2021-07-02 15:55:28" + "Date": "2021-07-02 15:55:28", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-ucl01/anat/sub-ucl01_space-other_T2star_label-SC_seg.json b/derivatives/labels/sub-ucl01/anat/sub-ucl01_space-other_T2star_label-SC_seg.json index 2fc9e6c103..795de5af56 100644 --- a/derivatives/labels/sub-ucl01/anat/sub-ucl01_space-other_T2star_label-SC_seg.json +++ b/derivatives/labels/sub-ucl01/anat/sub-ucl01_space-other_T2star_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:23" + "Date": "2021-06-08 15:06:23", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-ucl01/anat/sub-ucl01_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-ucl01/anat/sub-ucl01_space-other_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-ucl01/anat/sub-ucl01_space-other_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-ucl01/anat/sub-ucl01_space-other_T2w_label-SC_seg.json b/derivatives/labels/sub-ucl01/anat/sub-ucl01_space-other_T2w_label-SC_seg.json index 2fc9e6c103..0e9e6a8851 100644 --- a/derivatives/labels/sub-ucl01/anat/sub-ucl01_space-other_T2w_label-SC_seg.json +++ b/derivatives/labels/sub-ucl01/anat/sub-ucl01_space-other_T2w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:23" + "Date": "2021-06-08 15:06:23", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-ucl01/dwi/sub-ucl01_rec-average_dwi_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-ucl01/dwi/sub-ucl01_rec-average_dwi_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-ucl01/dwi/sub-ucl01_rec-average_dwi_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-ucl02/anat/sub-ucl02_flip-1_mt-on_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-ucl02/anat/sub-ucl02_flip-1_mt-on_space-other_MTS_label-SC_seg.json index 2fc9e6c103..5813c12ebe 100644 --- a/derivatives/labels/sub-ucl02/anat/sub-ucl02_flip-1_mt-on_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-ucl02/anat/sub-ucl02_flip-1_mt-on_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:23" + "Date": "2021-06-08 15:06:23", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-ucl02/anat/sub-ucl02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-ucl02/anat/sub-ucl02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-ucl02/anat/sub-ucl02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-ucl02/anat/sub-ucl02_flip-2_mt-off_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-ucl02/anat/sub-ucl02_flip-2_mt-off_space-other_MTS_label-SC_seg.json index 2fc9e6c103..5813c12ebe 100644 --- a/derivatives/labels/sub-ucl02/anat/sub-ucl02_flip-2_mt-off_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-ucl02/anat/sub-ucl02_flip-2_mt-off_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:23" + "Date": "2021-06-08 15:06:23", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-ucl02/anat/sub-ucl02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-ucl02/anat/sub-ucl02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-ucl02/anat/sub-ucl02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-ucl02/anat/sub-ucl02_space-other_T1w_label-SC_seg.json b/derivatives/labels/sub-ucl02/anat/sub-ucl02_space-other_T1w_label-SC_seg.json index a95ca26cff..b2a7b45d88 100644 --- a/derivatives/labels/sub-ucl02/anat/sub-ucl02_space-other_T1w_label-SC_seg.json +++ b/derivatives/labels/sub-ucl02/anat/sub-ucl02_space-other_T1w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Etienne Bergeron", - "Date": "2021-07-02 15:42:55" + "Date": "2021-07-02 15:42:55", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-ucl02/anat/sub-ucl02_space-other_T2star_label-SC_seg.json b/derivatives/labels/sub-ucl02/anat/sub-ucl02_space-other_T2star_label-SC_seg.json index 2fc9e6c103..795de5af56 100644 --- a/derivatives/labels/sub-ucl02/anat/sub-ucl02_space-other_T2star_label-SC_seg.json +++ b/derivatives/labels/sub-ucl02/anat/sub-ucl02_space-other_T2star_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:23" + "Date": "2021-06-08 15:06:23", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-ucl02/anat/sub-ucl02_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-ucl02/anat/sub-ucl02_space-other_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-ucl02/anat/sub-ucl02_space-other_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-ucl02/anat/sub-ucl02_space-other_T2w_label-SC_seg.json b/derivatives/labels/sub-ucl02/anat/sub-ucl02_space-other_T2w_label-SC_seg.json index 2fc9e6c103..0e9e6a8851 100644 --- a/derivatives/labels/sub-ucl02/anat/sub-ucl02_space-other_T2w_label-SC_seg.json +++ b/derivatives/labels/sub-ucl02/anat/sub-ucl02_space-other_T2w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:23" + "Date": "2021-06-08 15:06:23", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-ucl02/dwi/sub-ucl02_rec-average_dwi_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-ucl02/dwi/sub-ucl02_rec-average_dwi_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-ucl02/dwi/sub-ucl02_rec-average_dwi_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-ucl03/anat/sub-ucl03_flip-1_mt-on_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-ucl03/anat/sub-ucl03_flip-1_mt-on_space-other_MTS_label-SC_seg.json index 2fc9e6c103..5813c12ebe 100644 --- a/derivatives/labels/sub-ucl03/anat/sub-ucl03_flip-1_mt-on_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-ucl03/anat/sub-ucl03_flip-1_mt-on_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:23" + "Date": "2021-06-08 15:06:23", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-ucl03/anat/sub-ucl03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-ucl03/anat/sub-ucl03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-ucl03/anat/sub-ucl03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-ucl03/anat/sub-ucl03_flip-2_mt-off_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-ucl03/anat/sub-ucl03_flip-2_mt-off_space-other_MTS_label-SC_seg.json index 2fc9e6c103..5813c12ebe 100644 --- a/derivatives/labels/sub-ucl03/anat/sub-ucl03_flip-2_mt-off_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-ucl03/anat/sub-ucl03_flip-2_mt-off_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:23" + "Date": "2021-06-08 15:06:23", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-ucl03/anat/sub-ucl03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-ucl03/anat/sub-ucl03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-ucl03/anat/sub-ucl03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-ucl03/anat/sub-ucl03_space-other_T1w_label-SC_seg.json b/derivatives/labels/sub-ucl03/anat/sub-ucl03_space-other_T1w_label-SC_seg.json index c8a0dbfa8c..56a3727d6c 100644 --- a/derivatives/labels/sub-ucl03/anat/sub-ucl03_space-other_T1w_label-SC_seg.json +++ b/derivatives/labels/sub-ucl03/anat/sub-ucl03_space-other_T1w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Etienne Bergeron", - "Date": "2021-07-02 15:47:33" + "Date": "2021-07-02 15:47:33", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-ucl03/anat/sub-ucl03_space-other_T2star_label-SC_seg.json b/derivatives/labels/sub-ucl03/anat/sub-ucl03_space-other_T2star_label-SC_seg.json index 2fc9e6c103..795de5af56 100644 --- a/derivatives/labels/sub-ucl03/anat/sub-ucl03_space-other_T2star_label-SC_seg.json +++ b/derivatives/labels/sub-ucl03/anat/sub-ucl03_space-other_T2star_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:23" + "Date": "2021-06-08 15:06:23", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-ucl03/anat/sub-ucl03_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-ucl03/anat/sub-ucl03_space-other_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-ucl03/anat/sub-ucl03_space-other_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-ucl03/anat/sub-ucl03_space-other_T2w_label-SC_seg.json b/derivatives/labels/sub-ucl03/anat/sub-ucl03_space-other_T2w_label-SC_seg.json index bd03db4ccf..ed4cc220df 100644 --- a/derivatives/labels/sub-ucl03/anat/sub-ucl03_space-other_T2w_label-SC_seg.json +++ b/derivatives/labels/sub-ucl03/anat/sub-ucl03_space-other_T2w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Etienne Bergeron", - "Date": "2021-07-08 11:01:08" + "Date": "2021-07-08 11:01:08", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-ucl03/dwi/sub-ucl03_rec-average_dwi_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-ucl03/dwi/sub-ucl03_rec-average_dwi_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-ucl03/dwi/sub-ucl03_rec-average_dwi_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-ucl04/anat/sub-ucl04_flip-1_mt-on_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-ucl04/anat/sub-ucl04_flip-1_mt-on_space-other_MTS_label-SC_seg.json index 2fc9e6c103..5813c12ebe 100644 --- a/derivatives/labels/sub-ucl04/anat/sub-ucl04_flip-1_mt-on_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-ucl04/anat/sub-ucl04_flip-1_mt-on_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:23" + "Date": "2021-06-08 15:06:23", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-ucl04/anat/sub-ucl04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-ucl04/anat/sub-ucl04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-ucl04/anat/sub-ucl04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-ucl04/anat/sub-ucl04_flip-2_mt-off_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-ucl04/anat/sub-ucl04_flip-2_mt-off_space-other_MTS_label-SC_seg.json index 6484759de7..2f4b0aaa7f 100644 --- a/derivatives/labels/sub-ucl04/anat/sub-ucl04_flip-2_mt-off_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-ucl04/anat/sub-ucl04_flip-2_mt-off_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:24" + "Date": "2021-06-08 15:06:24", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-ucl04/anat/sub-ucl04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-ucl04/anat/sub-ucl04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-ucl04/anat/sub-ucl04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-ucl04/anat/sub-ucl04_space-other_T1w_label-SC_seg.json b/derivatives/labels/sub-ucl04/anat/sub-ucl04_space-other_T1w_label-SC_seg.json index 5bfe7a1aaa..e72eab2280 100644 --- a/derivatives/labels/sub-ucl04/anat/sub-ucl04_space-other_T1w_label-SC_seg.json +++ b/derivatives/labels/sub-ucl04/anat/sub-ucl04_space-other_T1w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Etienne Bergeron", - "Date": "2021-07-02 15:50:55" + "Date": "2021-07-02 15:50:55", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-ucl04/anat/sub-ucl04_space-other_T2star_label-SC_seg.json b/derivatives/labels/sub-ucl04/anat/sub-ucl04_space-other_T2star_label-SC_seg.json index 6484759de7..b4a69fce63 100644 --- a/derivatives/labels/sub-ucl04/anat/sub-ucl04_space-other_T2star_label-SC_seg.json +++ b/derivatives/labels/sub-ucl04/anat/sub-ucl04_space-other_T2star_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:24" + "Date": "2021-06-08 15:06:24", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-ucl04/anat/sub-ucl04_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-ucl04/anat/sub-ucl04_space-other_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-ucl04/anat/sub-ucl04_space-other_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-ucl04/anat/sub-ucl04_space-other_T2w_label-SC_seg.json b/derivatives/labels/sub-ucl04/anat/sub-ucl04_space-other_T2w_label-SC_seg.json index a577264e07..52fa086719 100644 --- a/derivatives/labels/sub-ucl04/anat/sub-ucl04_space-other_T2w_label-SC_seg.json +++ b/derivatives/labels/sub-ucl04/anat/sub-ucl04_space-other_T2w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Etienne Bergeron", - "Date": "2021-07-08 10:52:34" + "Date": "2021-07-08 10:52:34", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-ucl04/dwi/sub-ucl04_rec-average_dwi_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-ucl04/dwi/sub-ucl04_rec-average_dwi_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-ucl04/dwi/sub-ucl04_rec-average_dwi_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-ucl05/anat/sub-ucl05_flip-1_mt-on_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-ucl05/anat/sub-ucl05_flip-1_mt-on_space-other_MTS_label-SC_seg.json index 6484759de7..2f4b0aaa7f 100644 --- a/derivatives/labels/sub-ucl05/anat/sub-ucl05_flip-1_mt-on_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-ucl05/anat/sub-ucl05_flip-1_mt-on_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:24" + "Date": "2021-06-08 15:06:24", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-ucl05/anat/sub-ucl05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-ucl05/anat/sub-ucl05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-ucl05/anat/sub-ucl05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-ucl05/anat/sub-ucl05_flip-2_mt-off_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-ucl05/anat/sub-ucl05_flip-2_mt-off_space-other_MTS_label-SC_seg.json index 6484759de7..2f4b0aaa7f 100644 --- a/derivatives/labels/sub-ucl05/anat/sub-ucl05_flip-2_mt-off_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-ucl05/anat/sub-ucl05_flip-2_mt-off_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:24" + "Date": "2021-06-08 15:06:24", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-ucl05/anat/sub-ucl05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-ucl05/anat/sub-ucl05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-ucl05/anat/sub-ucl05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-ucl05/anat/sub-ucl05_space-other_T1w_label-SC_seg.json b/derivatives/labels/sub-ucl05/anat/sub-ucl05_space-other_T1w_label-SC_seg.json index abbfdb4682..8443087dd0 100644 --- a/derivatives/labels/sub-ucl05/anat/sub-ucl05_space-other_T1w_label-SC_seg.json +++ b/derivatives/labels/sub-ucl05/anat/sub-ucl05_space-other_T1w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Etienne Bergeron", - "Date": "2021-07-03 15:02:08" + "Date": "2021-07-03 15:02:08", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-ucl05/anat/sub-ucl05_space-other_T2star_label-SC_seg.json b/derivatives/labels/sub-ucl05/anat/sub-ucl05_space-other_T2star_label-SC_seg.json index 6484759de7..b4a69fce63 100644 --- a/derivatives/labels/sub-ucl05/anat/sub-ucl05_space-other_T2star_label-SC_seg.json +++ b/derivatives/labels/sub-ucl05/anat/sub-ucl05_space-other_T2star_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:24" + "Date": "2021-06-08 15:06:24", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-ucl05/anat/sub-ucl05_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-ucl05/anat/sub-ucl05_space-other_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-ucl05/anat/sub-ucl05_space-other_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-ucl05/anat/sub-ucl05_space-other_T2w_label-SC_seg.json b/derivatives/labels/sub-ucl05/anat/sub-ucl05_space-other_T2w_label-SC_seg.json index c156626ce1..928cbcb16f 100644 --- a/derivatives/labels/sub-ucl05/anat/sub-ucl05_space-other_T2w_label-SC_seg.json +++ b/derivatives/labels/sub-ucl05/anat/sub-ucl05_space-other_T2w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Etienne Bergeron", - "Date": "2021-07-08 13:12:55" + "Date": "2021-07-08 13:12:55", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-ucl05/dwi/sub-ucl05_rec-average_dwi_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-ucl05/dwi/sub-ucl05_rec-average_dwi_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-ucl05/dwi/sub-ucl05_rec-average_dwi_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-ucl06/anat/sub-ucl06_flip-1_mt-on_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-ucl06/anat/sub-ucl06_flip-1_mt-on_space-other_MTS_label-SC_seg.json index 6484759de7..2f4b0aaa7f 100644 --- a/derivatives/labels/sub-ucl06/anat/sub-ucl06_flip-1_mt-on_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-ucl06/anat/sub-ucl06_flip-1_mt-on_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:24" + "Date": "2021-06-08 15:06:24", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-ucl06/anat/sub-ucl06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-ucl06/anat/sub-ucl06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-ucl06/anat/sub-ucl06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-ucl06/anat/sub-ucl06_flip-2_mt-off_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-ucl06/anat/sub-ucl06_flip-2_mt-off_space-other_MTS_label-SC_seg.json index 6484759de7..2f4b0aaa7f 100644 --- a/derivatives/labels/sub-ucl06/anat/sub-ucl06_flip-2_mt-off_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-ucl06/anat/sub-ucl06_flip-2_mt-off_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:24" + "Date": "2021-06-08 15:06:24", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-ucl06/anat/sub-ucl06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-ucl06/anat/sub-ucl06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-ucl06/anat/sub-ucl06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-ucl06/anat/sub-ucl06_space-other_T1w_label-SC_seg.json b/derivatives/labels/sub-ucl06/anat/sub-ucl06_space-other_T1w_label-SC_seg.json index 383b157c89..9f4a548de5 100644 --- a/derivatives/labels/sub-ucl06/anat/sub-ucl06_space-other_T1w_label-SC_seg.json +++ b/derivatives/labels/sub-ucl06/anat/sub-ucl06_space-other_T1w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Etienne Bergeron", - "Date": "2021-07-08 13:17:17" + "Date": "2021-07-08 13:17:17", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-ucl06/anat/sub-ucl06_space-other_T2star_label-SC_seg.json b/derivatives/labels/sub-ucl06/anat/sub-ucl06_space-other_T2star_label-SC_seg.json index 6484759de7..b4a69fce63 100644 --- a/derivatives/labels/sub-ucl06/anat/sub-ucl06_space-other_T2star_label-SC_seg.json +++ b/derivatives/labels/sub-ucl06/anat/sub-ucl06_space-other_T2star_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:24" + "Date": "2021-06-08 15:06:24", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-ucl06/anat/sub-ucl06_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-ucl06/anat/sub-ucl06_space-other_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-ucl06/anat/sub-ucl06_space-other_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-ucl06/anat/sub-ucl06_space-other_T2w_label-SC_seg.json b/derivatives/labels/sub-ucl06/anat/sub-ucl06_space-other_T2w_label-SC_seg.json index 9e810a36a3..5fba59dd77 100644 --- a/derivatives/labels/sub-ucl06/anat/sub-ucl06_space-other_T2w_label-SC_seg.json +++ b/derivatives/labels/sub-ucl06/anat/sub-ucl06_space-other_T2w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Etienne Bergeron", - "Date": "2021-07-08 13:23:55" + "Date": "2021-07-08 13:23:55", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-ucl06/dwi/sub-ucl06_rec-average_dwi_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-ucl06/dwi/sub-ucl06_rec-average_dwi_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-ucl06/dwi/sub-ucl06_rec-average_dwi_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-unf01/anat/sub-unf01_flip-1_mt-on_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-unf01/anat/sub-unf01_flip-1_mt-on_space-other_MTS_label-SC_seg.json index 6484759de7..2f4b0aaa7f 100644 --- a/derivatives/labels/sub-unf01/anat/sub-unf01_flip-1_mt-on_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-unf01/anat/sub-unf01_flip-1_mt-on_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:24" + "Date": "2021-06-08 15:06:24", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-unf01/anat/sub-unf01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-unf01/anat/sub-unf01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-unf01/anat/sub-unf01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-unf01/anat/sub-unf01_flip-2_mt-off_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-unf01/anat/sub-unf01_flip-2_mt-off_space-other_MTS_label-SC_seg.json index 6ec7fed27d..05c5c742ac 100644 --- a/derivatives/labels/sub-unf01/anat/sub-unf01_flip-2_mt-off_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-unf01/anat/sub-unf01_flip-2_mt-off_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-07-25 12:13:59" + "Date": "2021-07-25 12:13:59", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-unf01/anat/sub-unf01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-unf01/anat/sub-unf01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-unf01/anat/sub-unf01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-unf01/anat/sub-unf01_space-other_T1w_label-SC_seg.json b/derivatives/labels/sub-unf01/anat/sub-unf01_space-other_T1w_label-SC_seg.json index ca4a83e73b..5feae8537e 100644 --- a/derivatives/labels/sub-unf01/anat/sub-unf01_space-other_T1w_label-SC_seg.json +++ b/derivatives/labels/sub-unf01/anat/sub-unf01_space-other_T1w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Etienne Bergeron", - "Date": "2021-07-08 13:26:06" + "Date": "2021-07-08 13:26:06", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-unf01/anat/sub-unf01_space-other_T2star_label-SC_seg.json b/derivatives/labels/sub-unf01/anat/sub-unf01_space-other_T2star_label-SC_seg.json index 6484759de7..b4a69fce63 100644 --- a/derivatives/labels/sub-unf01/anat/sub-unf01_space-other_T2star_label-SC_seg.json +++ b/derivatives/labels/sub-unf01/anat/sub-unf01_space-other_T2star_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:24" + "Date": "2021-06-08 15:06:24", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-unf01/anat/sub-unf01_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-unf01/anat/sub-unf01_space-other_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-unf01/anat/sub-unf01_space-other_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-unf01/anat/sub-unf01_space-other_T2w_label-SC_seg.json b/derivatives/labels/sub-unf01/anat/sub-unf01_space-other_T2w_label-SC_seg.json index 207e11078c..6ab646b730 100644 --- a/derivatives/labels/sub-unf01/anat/sub-unf01_space-other_T2w_label-SC_seg.json +++ b/derivatives/labels/sub-unf01/anat/sub-unf01_space-other_T2w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Olivier Morin Lupien", - "Date": "2021-07-24 10:07:57" + "Date": "2021-07-24 10:07:57", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-unf01/dwi/sub-unf01_rec-average_dwi_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-unf01/dwi/sub-unf01_rec-average_dwi_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-unf01/dwi/sub-unf01_rec-average_dwi_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-unf02/anat/sub-unf02_flip-1_mt-on_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-unf02/anat/sub-unf02_flip-1_mt-on_space-other_MTS_label-SC_seg.json index 6484759de7..2f4b0aaa7f 100644 --- a/derivatives/labels/sub-unf02/anat/sub-unf02_flip-1_mt-on_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-unf02/anat/sub-unf02_flip-1_mt-on_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:24" + "Date": "2021-06-08 15:06:24", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-unf02/anat/sub-unf02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-unf02/anat/sub-unf02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-unf02/anat/sub-unf02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-unf02/anat/sub-unf02_flip-2_mt-off_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-unf02/anat/sub-unf02_flip-2_mt-off_space-other_MTS_label-SC_seg.json index 6484759de7..2f4b0aaa7f 100644 --- a/derivatives/labels/sub-unf02/anat/sub-unf02_flip-2_mt-off_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-unf02/anat/sub-unf02_flip-2_mt-off_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:24" + "Date": "2021-06-08 15:06:24", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-unf02/anat/sub-unf02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-unf02/anat/sub-unf02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-unf02/anat/sub-unf02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-unf02/anat/sub-unf02_space-other_T1w_label-SC_seg.json b/derivatives/labels/sub-unf02/anat/sub-unf02_space-other_T1w_label-SC_seg.json index 833854c193..e1a612548b 100644 --- a/derivatives/labels/sub-unf02/anat/sub-unf02_space-other_T1w_label-SC_seg.json +++ b/derivatives/labels/sub-unf02/anat/sub-unf02_space-other_T1w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Etienne Bergeron", - "Date": "2021-07-08 13:35:02" + "Date": "2021-07-08 13:35:02", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-unf02/anat/sub-unf02_space-other_T2star_label-SC_seg.json b/derivatives/labels/sub-unf02/anat/sub-unf02_space-other_T2star_label-SC_seg.json index 6484759de7..b4a69fce63 100644 --- a/derivatives/labels/sub-unf02/anat/sub-unf02_space-other_T2star_label-SC_seg.json +++ b/derivatives/labels/sub-unf02/anat/sub-unf02_space-other_T2star_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:24" + "Date": "2021-06-08 15:06:24", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-unf02/anat/sub-unf02_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-unf02/anat/sub-unf02_space-other_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-unf02/anat/sub-unf02_space-other_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-unf02/anat/sub-unf02_space-other_T2w_label-SC_seg.json b/derivatives/labels/sub-unf02/anat/sub-unf02_space-other_T2w_label-SC_seg.json index d258103b9d..6bd6f474bc 100644 --- a/derivatives/labels/sub-unf02/anat/sub-unf02_space-other_T2w_label-SC_seg.json +++ b/derivatives/labels/sub-unf02/anat/sub-unf02_space-other_T2w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Olivier Morin Lupien", - "Date": "2021-07-24 10:09:49" + "Date": "2021-07-24 10:09:49", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-unf02/dwi/sub-unf02_rec-average_dwi_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-unf02/dwi/sub-unf02_rec-average_dwi_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-unf02/dwi/sub-unf02_rec-average_dwi_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-unf03/anat/sub-unf03_flip-1_mt-on_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-unf03/anat/sub-unf03_flip-1_mt-on_space-other_MTS_label-SC_seg.json index 6484759de7..2f4b0aaa7f 100644 --- a/derivatives/labels/sub-unf03/anat/sub-unf03_flip-1_mt-on_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-unf03/anat/sub-unf03_flip-1_mt-on_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:24" + "Date": "2021-06-08 15:06:24", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-unf03/anat/sub-unf03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-unf03/anat/sub-unf03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-unf03/anat/sub-unf03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-unf03/anat/sub-unf03_flip-2_mt-off_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-unf03/anat/sub-unf03_flip-2_mt-off_space-other_MTS_label-SC_seg.json index c8318182c3..b59e8e3df2 100644 --- a/derivatives/labels/sub-unf03/anat/sub-unf03_flip-2_mt-off_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-unf03/anat/sub-unf03_flip-2_mt-off_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-07-25 12:17:40" + "Date": "2021-07-25 12:17:40", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-unf03/anat/sub-unf03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-unf03/anat/sub-unf03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-unf03/anat/sub-unf03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-unf03/anat/sub-unf03_space-other_T1w_label-SC_seg.json b/derivatives/labels/sub-unf03/anat/sub-unf03_space-other_T1w_label-SC_seg.json index 55cc939c04..4138968e54 100644 --- a/derivatives/labels/sub-unf03/anat/sub-unf03_space-other_T1w_label-SC_seg.json +++ b/derivatives/labels/sub-unf03/anat/sub-unf03_space-other_T1w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Etienne Bergeron", - "Date": "2021-07-08 13:43:20" + "Date": "2021-07-08 13:43:20", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-unf03/anat/sub-unf03_space-other_T2star_label-SC_seg.json b/derivatives/labels/sub-unf03/anat/sub-unf03_space-other_T2star_label-SC_seg.json index 6484759de7..b4a69fce63 100644 --- a/derivatives/labels/sub-unf03/anat/sub-unf03_space-other_T2star_label-SC_seg.json +++ b/derivatives/labels/sub-unf03/anat/sub-unf03_space-other_T2star_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:24" + "Date": "2021-06-08 15:06:24", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-unf03/anat/sub-unf03_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-unf03/anat/sub-unf03_space-other_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-unf03/anat/sub-unf03_space-other_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-unf03/anat/sub-unf03_space-other_T2w_label-SC_seg.json b/derivatives/labels/sub-unf03/anat/sub-unf03_space-other_T2w_label-SC_seg.json index ecf2ddcc94..b48748aff5 100644 --- a/derivatives/labels/sub-unf03/anat/sub-unf03_space-other_T2w_label-SC_seg.json +++ b/derivatives/labels/sub-unf03/anat/sub-unf03_space-other_T2w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Olivier Morin Lupien", - "Date": "2021-07-24 10:10:20" + "Date": "2021-07-24 10:10:20", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-unf03/dwi/sub-unf03_rec-average_dwi_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-unf03/dwi/sub-unf03_rec-average_dwi_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-unf03/dwi/sub-unf03_rec-average_dwi_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-unf04/anat/sub-unf04_flip-1_mt-on_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-unf04/anat/sub-unf04_flip-1_mt-on_space-other_MTS_label-SC_seg.json index 3a37c2b7f2..ce3798a176 100644 --- a/derivatives/labels/sub-unf04/anat/sub-unf04_flip-1_mt-on_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-unf04/anat/sub-unf04_flip-1_mt-on_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Olivier Morin Lupien", - "Date": "2021-07-24 10:18:36" + "Date": "2021-07-24 10:18:36", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-unf04/anat/sub-unf04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-unf04/anat/sub-unf04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-unf04/anat/sub-unf04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-unf04/anat/sub-unf04_flip-2_mt-off_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-unf04/anat/sub-unf04_flip-2_mt-off_space-other_MTS_label-SC_seg.json index 82f8e3edbe..b9aa48698a 100644 --- a/derivatives/labels/sub-unf04/anat/sub-unf04_flip-2_mt-off_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-unf04/anat/sub-unf04_flip-2_mt-off_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:25" + "Date": "2021-06-08 15:06:25", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-unf04/anat/sub-unf04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-unf04/anat/sub-unf04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-unf04/anat/sub-unf04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-unf04/anat/sub-unf04_space-other_T1w_label-SC_seg.json b/derivatives/labels/sub-unf04/anat/sub-unf04_space-other_T1w_label-SC_seg.json index 138cee218b..82dbff3f3b 100644 --- a/derivatives/labels/sub-unf04/anat/sub-unf04_space-other_T1w_label-SC_seg.json +++ b/derivatives/labels/sub-unf04/anat/sub-unf04_space-other_T1w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Etienne Bergeron", - "Date": "2021-07-08 13:50:19" + "Date": "2021-07-08 13:50:19", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-unf04/anat/sub-unf04_space-other_T2star_label-SC_seg.json b/derivatives/labels/sub-unf04/anat/sub-unf04_space-other_T2star_label-SC_seg.json index 25e5bd13a0..e0dd4c6669 100644 --- a/derivatives/labels/sub-unf04/anat/sub-unf04_space-other_T2star_label-SC_seg.json +++ b/derivatives/labels/sub-unf04/anat/sub-unf04_space-other_T2star_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Olivier Morin Lupien", - "Date": "2021-07-24 10:30:12" + "Date": "2021-07-24 10:30:12", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-unf04/anat/sub-unf04_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-unf04/anat/sub-unf04_space-other_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-unf04/anat/sub-unf04_space-other_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-unf04/anat/sub-unf04_space-other_T2w_label-SC_seg.json b/derivatives/labels/sub-unf04/anat/sub-unf04_space-other_T2w_label-SC_seg.json index 82f8e3edbe..1e4a078f80 100644 --- a/derivatives/labels/sub-unf04/anat/sub-unf04_space-other_T2w_label-SC_seg.json +++ b/derivatives/labels/sub-unf04/anat/sub-unf04_space-other_T2w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:25" + "Date": "2021-06-08 15:06:25", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-unf04/dwi/sub-unf04_rec-average_dwi_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-unf04/dwi/sub-unf04_rec-average_dwi_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-unf04/dwi/sub-unf04_rec-average_dwi_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-unf05/anat/sub-unf05_flip-1_mt-on_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-unf05/anat/sub-unf05_flip-1_mt-on_space-other_MTS_label-SC_seg.json index 82f8e3edbe..b9aa48698a 100644 --- a/derivatives/labels/sub-unf05/anat/sub-unf05_flip-1_mt-on_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-unf05/anat/sub-unf05_flip-1_mt-on_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:25" + "Date": "2021-06-08 15:06:25", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-unf05/anat/sub-unf05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-unf05/anat/sub-unf05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-unf05/anat/sub-unf05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-unf05/anat/sub-unf05_flip-2_mt-off_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-unf05/anat/sub-unf05_flip-2_mt-off_space-other_MTS_label-SC_seg.json index 514b675ea2..c8f0004444 100644 --- a/derivatives/labels/sub-unf05/anat/sub-unf05_flip-2_mt-off_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-unf05/anat/sub-unf05_flip-2_mt-off_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-07-25 12:19:19" + "Date": "2021-07-25 12:19:19", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-unf05/anat/sub-unf05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-unf05/anat/sub-unf05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-unf05/anat/sub-unf05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-unf05/anat/sub-unf05_space-other_T1w_label-SC_seg.json b/derivatives/labels/sub-unf05/anat/sub-unf05_space-other_T1w_label-SC_seg.json index 5925cc46e7..921eda087f 100644 --- a/derivatives/labels/sub-unf05/anat/sub-unf05_space-other_T1w_label-SC_seg.json +++ b/derivatives/labels/sub-unf05/anat/sub-unf05_space-other_T1w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Etienne Bergeron", - "Date": "2021-07-08 13:58:45" + "Date": "2021-07-08 13:58:45", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-unf05/anat/sub-unf05_space-other_T2star_label-SC_seg.json b/derivatives/labels/sub-unf05/anat/sub-unf05_space-other_T2star_label-SC_seg.json index 82f8e3edbe..300b32dedf 100644 --- a/derivatives/labels/sub-unf05/anat/sub-unf05_space-other_T2star_label-SC_seg.json +++ b/derivatives/labels/sub-unf05/anat/sub-unf05_space-other_T2star_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:25" + "Date": "2021-06-08 15:06:25", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-unf05/anat/sub-unf05_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-unf05/anat/sub-unf05_space-other_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-unf05/anat/sub-unf05_space-other_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-unf05/anat/sub-unf05_space-other_T2w_label-SC_seg.json b/derivatives/labels/sub-unf05/anat/sub-unf05_space-other_T2w_label-SC_seg.json index 82f8e3edbe..1e4a078f80 100644 --- a/derivatives/labels/sub-unf05/anat/sub-unf05_space-other_T2w_label-SC_seg.json +++ b/derivatives/labels/sub-unf05/anat/sub-unf05_space-other_T2w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:25" + "Date": "2021-06-08 15:06:25", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-unf05/dwi/sub-unf05_rec-average_dwi_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-unf05/dwi/sub-unf05_rec-average_dwi_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-unf05/dwi/sub-unf05_rec-average_dwi_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-unf06/anat/sub-unf06_flip-1_mt-on_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-unf06/anat/sub-unf06_flip-1_mt-on_space-other_MTS_label-SC_seg.json index 13c2493b92..520d8f0f35 100644 --- a/derivatives/labels/sub-unf06/anat/sub-unf06_flip-1_mt-on_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-unf06/anat/sub-unf06_flip-1_mt-on_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Olivier Morin Lupien", - "Date": "2021-07-24 10:31:11" + "Date": "2021-07-24 10:31:11", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-unf06/anat/sub-unf06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-unf06/anat/sub-unf06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-unf06/anat/sub-unf06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-unf06/anat/sub-unf06_flip-2_mt-off_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-unf06/anat/sub-unf06_flip-2_mt-off_space-other_MTS_label-SC_seg.json index 05b2d3da62..259f39ec98 100644 --- a/derivatives/labels/sub-unf06/anat/sub-unf06_flip-2_mt-off_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-unf06/anat/sub-unf06_flip-2_mt-off_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Olivier Morin Lupien", - "Date": "2021-07-24 10:22:01" + "Date": "2021-07-24 10:22:01", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-unf06/anat/sub-unf06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-unf06/anat/sub-unf06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-unf06/anat/sub-unf06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-unf06/anat/sub-unf06_space-other_T1w_label-SC_seg.json b/derivatives/labels/sub-unf06/anat/sub-unf06_space-other_T1w_label-SC_seg.json index e4e98aaf06..c21ee18ca6 100644 --- a/derivatives/labels/sub-unf06/anat/sub-unf06_space-other_T1w_label-SC_seg.json +++ b/derivatives/labels/sub-unf06/anat/sub-unf06_space-other_T1w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Etienne Bergeron", - "Date": "2021-07-08 14:00:58" + "Date": "2021-07-08 14:00:58", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-unf06/anat/sub-unf06_space-other_T2star_label-SC_seg.json b/derivatives/labels/sub-unf06/anat/sub-unf06_space-other_T2star_label-SC_seg.json index 82f8e3edbe..300b32dedf 100644 --- a/derivatives/labels/sub-unf06/anat/sub-unf06_space-other_T2star_label-SC_seg.json +++ b/derivatives/labels/sub-unf06/anat/sub-unf06_space-other_T2star_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:25" + "Date": "2021-06-08 15:06:25", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-unf06/anat/sub-unf06_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-unf06/anat/sub-unf06_space-other_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-unf06/anat/sub-unf06_space-other_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-unf06/anat/sub-unf06_space-other_T2w_label-SC_seg.json b/derivatives/labels/sub-unf06/anat/sub-unf06_space-other_T2w_label-SC_seg.json index ff1a0ce638..1ade5f7aa4 100644 --- a/derivatives/labels/sub-unf06/anat/sub-unf06_space-other_T2w_label-SC_seg.json +++ b/derivatives/labels/sub-unf06/anat/sub-unf06_space-other_T2w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Olivier Morin Lupien", - "Date": "2021-07-24 10:13:18" + "Date": "2021-07-24 10:13:18", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-unf06/dwi/sub-unf06_rec-average_dwi_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-unf06/dwi/sub-unf06_rec-average_dwi_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-unf06/dwi/sub-unf06_rec-average_dwi_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-unf07/anat/sub-unf07_flip-1_mt-on_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-unf07/anat/sub-unf07_flip-1_mt-on_space-other_MTS_label-SC_seg.json index 82f8e3edbe..b9aa48698a 100644 --- a/derivatives/labels/sub-unf07/anat/sub-unf07_flip-1_mt-on_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-unf07/anat/sub-unf07_flip-1_mt-on_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:25" + "Date": "2021-06-08 15:06:25", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-unf07/anat/sub-unf07_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-unf07/anat/sub-unf07_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-unf07/anat/sub-unf07_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-unf07/anat/sub-unf07_flip-2_mt-off_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-unf07/anat/sub-unf07_flip-2_mt-off_space-other_MTS_label-SC_seg.json index a106541d3d..4bb8374c68 100644 --- a/derivatives/labels/sub-unf07/anat/sub-unf07_flip-2_mt-off_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-unf07/anat/sub-unf07_flip-2_mt-off_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-07-25 12:20:27" + "Date": "2021-07-25 12:20:27", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-unf07/anat/sub-unf07_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-unf07/anat/sub-unf07_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-unf07/anat/sub-unf07_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-unf07/anat/sub-unf07_space-other_T1w_label-SC_seg.json b/derivatives/labels/sub-unf07/anat/sub-unf07_space-other_T1w_label-SC_seg.json index 647bc0ad10..4c2076dc49 100644 --- a/derivatives/labels/sub-unf07/anat/sub-unf07_space-other_T1w_label-SC_seg.json +++ b/derivatives/labels/sub-unf07/anat/sub-unf07_space-other_T1w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Etienne Bergeron", - "Date": "2021-07-08 14:05:55" + "Date": "2021-07-08 14:05:55", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-unf07/anat/sub-unf07_space-other_T2star_label-SC_seg.json b/derivatives/labels/sub-unf07/anat/sub-unf07_space-other_T2star_label-SC_seg.json index 82f8e3edbe..300b32dedf 100644 --- a/derivatives/labels/sub-unf07/anat/sub-unf07_space-other_T2star_label-SC_seg.json +++ b/derivatives/labels/sub-unf07/anat/sub-unf07_space-other_T2star_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:25" + "Date": "2021-06-08 15:06:25", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-unf07/anat/sub-unf07_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-unf07/anat/sub-unf07_space-other_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-unf07/anat/sub-unf07_space-other_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-unf07/anat/sub-unf07_space-other_T2w_label-SC_seg.json b/derivatives/labels/sub-unf07/anat/sub-unf07_space-other_T2w_label-SC_seg.json index e86c1f046e..02dc605e3c 100644 --- a/derivatives/labels/sub-unf07/anat/sub-unf07_space-other_T2w_label-SC_seg.json +++ b/derivatives/labels/sub-unf07/anat/sub-unf07_space-other_T2w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Olivier Morin Lupien", - "Date": "2021-07-24 10:14:35" + "Date": "2021-07-24 10:14:35", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-unf07/dwi/sub-unf07_rec-average_dwi_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-unf07/dwi/sub-unf07_rec-average_dwi_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-unf07/dwi/sub-unf07_rec-average_dwi_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-vallHebron01/anat/sub-vallHebron01_flip-1_mt-on_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-vallHebron01/anat/sub-vallHebron01_flip-1_mt-on_space-other_MTS_label-SC_seg.json index 82f8e3edbe..b9aa48698a 100644 --- a/derivatives/labels/sub-vallHebron01/anat/sub-vallHebron01_flip-1_mt-on_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-vallHebron01/anat/sub-vallHebron01_flip-1_mt-on_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:25" + "Date": "2021-06-08 15:06:25", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-vallHebron01/anat/sub-vallHebron01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-vallHebron01/anat/sub-vallHebron01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-vallHebron01/anat/sub-vallHebron01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-vallHebron01/anat/sub-vallHebron01_flip-2_mt-off_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-vallHebron01/anat/sub-vallHebron01_flip-2_mt-off_space-other_MTS_label-SC_seg.json index 8874f87373..65e4337d93 100644 --- a/derivatives/labels/sub-vallHebron01/anat/sub-vallHebron01_flip-2_mt-off_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-vallHebron01/anat/sub-vallHebron01_flip-2_mt-off_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Olivier Morin Lupien", - "Date": "2021-07-24 10:29:57" + "Date": "2021-07-24 10:29:57", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-vallHebron01/anat/sub-vallHebron01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-vallHebron01/anat/sub-vallHebron01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-vallHebron01/anat/sub-vallHebron01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-vallHebron01/anat/sub-vallHebron01_space-other_T1w_label-SC_seg.json b/derivatives/labels/sub-vallHebron01/anat/sub-vallHebron01_space-other_T1w_label-SC_seg.json index e5ccc08bcc..db422081bf 100644 --- a/derivatives/labels/sub-vallHebron01/anat/sub-vallHebron01_space-other_T1w_label-SC_seg.json +++ b/derivatives/labels/sub-vallHebron01/anat/sub-vallHebron01_space-other_T1w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Olivier Morin Lupien", - "Date": "2021-07-24 10:06:24" + "Date": "2021-07-24 10:06:24", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-vallHebron01/anat/sub-vallHebron01_space-other_T2star_label-SC_seg.json b/derivatives/labels/sub-vallHebron01/anat/sub-vallHebron01_space-other_T2star_label-SC_seg.json index e8fd62ffcc..af6d7ae2b1 100644 --- a/derivatives/labels/sub-vallHebron01/anat/sub-vallHebron01_space-other_T2star_label-SC_seg.json +++ b/derivatives/labels/sub-vallHebron01/anat/sub-vallHebron01_space-other_T2star_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-07-12 15:16:57" + "Date": "2021-07-12 15:16:57", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-vallHebron01/anat/sub-vallHebron01_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-vallHebron01/anat/sub-vallHebron01_space-other_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-vallHebron01/anat/sub-vallHebron01_space-other_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-vallHebron01/anat/sub-vallHebron01_space-other_T2w_label-SC_seg.json b/derivatives/labels/sub-vallHebron01/anat/sub-vallHebron01_space-other_T2w_label-SC_seg.json index cce3a86b85..44ccfe4d2b 100644 --- a/derivatives/labels/sub-vallHebron01/anat/sub-vallHebron01_space-other_T2w_label-SC_seg.json +++ b/derivatives/labels/sub-vallHebron01/anat/sub-vallHebron01_space-other_T2w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Olivier Morin Lupien", - "Date": "2021-07-24 10:17:51" + "Date": "2021-07-24 10:17:51", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-vallHebron01/dwi/sub-vallHebron01_rec-average_dwi_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-vallHebron01/dwi/sub-vallHebron01_rec-average_dwi_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-vallHebron01/dwi/sub-vallHebron01_rec-average_dwi_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-vallHebron02/anat/sub-vallHebron02_flip-1_mt-on_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-vallHebron02/anat/sub-vallHebron02_flip-1_mt-on_space-other_MTS_label-SC_seg.json index 82f8e3edbe..b9aa48698a 100644 --- a/derivatives/labels/sub-vallHebron02/anat/sub-vallHebron02_flip-1_mt-on_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-vallHebron02/anat/sub-vallHebron02_flip-1_mt-on_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:25" + "Date": "2021-06-08 15:06:25", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-vallHebron02/anat/sub-vallHebron02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-vallHebron02/anat/sub-vallHebron02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-vallHebron02/anat/sub-vallHebron02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-vallHebron02/anat/sub-vallHebron02_flip-2_mt-off_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-vallHebron02/anat/sub-vallHebron02_flip-2_mt-off_space-other_MTS_label-SC_seg.json index 069e3fed73..3a01e03ecb 100644 --- a/derivatives/labels/sub-vallHebron02/anat/sub-vallHebron02_flip-2_mt-off_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-vallHebron02/anat/sub-vallHebron02_flip-2_mt-off_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-07-25 12:26:39" + "Date": "2021-07-25 12:26:39", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-vallHebron02/anat/sub-vallHebron02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-vallHebron02/anat/sub-vallHebron02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-vallHebron02/anat/sub-vallHebron02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-vallHebron02/anat/sub-vallHebron02_space-other_T1w_label-SC_seg.json b/derivatives/labels/sub-vallHebron02/anat/sub-vallHebron02_space-other_T1w_label-SC_seg.json index 6537c4ba71..02181f3c11 100644 --- a/derivatives/labels/sub-vallHebron02/anat/sub-vallHebron02_space-other_T1w_label-SC_seg.json +++ b/derivatives/labels/sub-vallHebron02/anat/sub-vallHebron02_space-other_T1w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Olivier Morin Lupien", - "Date": "2021-07-24 10:07:14" + "Date": "2021-07-24 10:07:14", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-vallHebron02/anat/sub-vallHebron02_space-other_T2star_label-SC_seg.json b/derivatives/labels/sub-vallHebron02/anat/sub-vallHebron02_space-other_T2star_label-SC_seg.json index 5506649f54..b4b816f296 100644 --- a/derivatives/labels/sub-vallHebron02/anat/sub-vallHebron02_space-other_T2star_label-SC_seg.json +++ b/derivatives/labels/sub-vallHebron02/anat/sub-vallHebron02_space-other_T2star_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Olivier Morin Lupien", - "Date": "2021-07-24 10:36:49" + "Date": "2021-07-24 10:36:49", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-vallHebron02/anat/sub-vallHebron02_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-vallHebron02/anat/sub-vallHebron02_space-other_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-vallHebron02/anat/sub-vallHebron02_space-other_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-vallHebron02/anat/sub-vallHebron02_space-other_T2w_label-SC_seg.json b/derivatives/labels/sub-vallHebron02/anat/sub-vallHebron02_space-other_T2w_label-SC_seg.json index 403ca555d9..ec34ceb58d 100644 --- a/derivatives/labels/sub-vallHebron02/anat/sub-vallHebron02_space-other_T2w_label-SC_seg.json +++ b/derivatives/labels/sub-vallHebron02/anat/sub-vallHebron02_space-other_T2w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-07-25 12:24:37" + "Date": "2021-07-25 12:24:37", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-vallHebron02/dwi/sub-vallHebron02_rec-average_dwi_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-vallHebron02/dwi/sub-vallHebron02_rec-average_dwi_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-vallHebron02/dwi/sub-vallHebron02_rec-average_dwi_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-vallHebron03/anat/sub-vallHebron03_flip-1_mt-on_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-vallHebron03/anat/sub-vallHebron03_flip-1_mt-on_space-other_MTS_label-SC_seg.json index 7bd07e4155..6b1b18643f 100644 --- a/derivatives/labels/sub-vallHebron03/anat/sub-vallHebron03_flip-1_mt-on_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-vallHebron03/anat/sub-vallHebron03_flip-1_mt-on_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-07-08 12:19:48" + "Date": "2021-07-08 12:19:48", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-vallHebron03/anat/sub-vallHebron03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-vallHebron03/anat/sub-vallHebron03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-vallHebron03/anat/sub-vallHebron03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-vallHebron03/anat/sub-vallHebron03_flip-2_mt-off_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-vallHebron03/anat/sub-vallHebron03_flip-2_mt-off_space-other_MTS_label-SC_seg.json index 40b2db4a27..d87708c3dc 100644 --- a/derivatives/labels/sub-vallHebron03/anat/sub-vallHebron03_flip-2_mt-off_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-vallHebron03/anat/sub-vallHebron03_flip-2_mt-off_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-07-25 12:28:24" + "Date": "2021-07-25 12:28:24", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-vallHebron03/anat/sub-vallHebron03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-vallHebron03/anat/sub-vallHebron03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-vallHebron03/anat/sub-vallHebron03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-vallHebron03/anat/sub-vallHebron03_space-other_T1w_label-SC_seg.json b/derivatives/labels/sub-vallHebron03/anat/sub-vallHebron03_space-other_T1w_label-SC_seg.json index c6419b50f0..03acb47179 100644 --- a/derivatives/labels/sub-vallHebron03/anat/sub-vallHebron03_space-other_T1w_label-SC_seg.json +++ b/derivatives/labels/sub-vallHebron03/anat/sub-vallHebron03_space-other_T1w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Olivier Morin Lupien", - "Date": "2021-07-24 10:11:26" + "Date": "2021-07-24 10:11:26", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-vallHebron03/anat/sub-vallHebron03_space-other_T2star_label-SC_seg.json b/derivatives/labels/sub-vallHebron03/anat/sub-vallHebron03_space-other_T2star_label-SC_seg.json index 82f8e3edbe..300b32dedf 100644 --- a/derivatives/labels/sub-vallHebron03/anat/sub-vallHebron03_space-other_T2star_label-SC_seg.json +++ b/derivatives/labels/sub-vallHebron03/anat/sub-vallHebron03_space-other_T2star_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:25" + "Date": "2021-06-08 15:06:25", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-vallHebron03/anat/sub-vallHebron03_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-vallHebron03/anat/sub-vallHebron03_space-other_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-vallHebron03/anat/sub-vallHebron03_space-other_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-vallHebron03/anat/sub-vallHebron03_space-other_T2w_label-SC_seg.json b/derivatives/labels/sub-vallHebron03/anat/sub-vallHebron03_space-other_T2w_label-SC_seg.json index 82f8e3edbe..1e4a078f80 100644 --- a/derivatives/labels/sub-vallHebron03/anat/sub-vallHebron03_space-other_T2w_label-SC_seg.json +++ b/derivatives/labels/sub-vallHebron03/anat/sub-vallHebron03_space-other_T2w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:25" + "Date": "2021-06-08 15:06:25", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-vallHebron03/dwi/sub-vallHebron03_rec-average_dwi_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-vallHebron03/dwi/sub-vallHebron03_rec-average_dwi_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-vallHebron03/dwi/sub-vallHebron03_rec-average_dwi_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-vallHebron04/anat/sub-vallHebron04_flip-1_mt-on_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-vallHebron04/anat/sub-vallHebron04_flip-1_mt-on_space-other_MTS_label-SC_seg.json index 7cbe87d03a..cf94eeedaa 100644 --- a/derivatives/labels/sub-vallHebron04/anat/sub-vallHebron04_flip-1_mt-on_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-vallHebron04/anat/sub-vallHebron04_flip-1_mt-on_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-07-08 12:23:13" + "Date": "2021-07-08 12:23:13", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-vallHebron04/anat/sub-vallHebron04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-vallHebron04/anat/sub-vallHebron04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-vallHebron04/anat/sub-vallHebron04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-vallHebron04/anat/sub-vallHebron04_flip-2_mt-off_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-vallHebron04/anat/sub-vallHebron04_flip-2_mt-off_space-other_MTS_label-SC_seg.json index 0617f01835..9a6af5cfac 100644 --- a/derivatives/labels/sub-vallHebron04/anat/sub-vallHebron04_flip-2_mt-off_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-vallHebron04/anat/sub-vallHebron04_flip-2_mt-off_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-07-08 12:18:07" + "Date": "2021-07-08 12:18:07", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-vallHebron04/anat/sub-vallHebron04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-vallHebron04/anat/sub-vallHebron04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-vallHebron04/anat/sub-vallHebron04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-vallHebron04/anat/sub-vallHebron04_space-other_T1w_label-SC_seg.json b/derivatives/labels/sub-vallHebron04/anat/sub-vallHebron04_space-other_T1w_label-SC_seg.json index 5c0c739ca1..0eaefa92ad 100644 --- a/derivatives/labels/sub-vallHebron04/anat/sub-vallHebron04_space-other_T1w_label-SC_seg.json +++ b/derivatives/labels/sub-vallHebron04/anat/sub-vallHebron04_space-other_T1w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Olivier Morin Lupien", - "Date": "2021-07-24 10:14:05" + "Date": "2021-07-24 10:14:05", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-vallHebron04/anat/sub-vallHebron04_space-other_T2star_label-SC_seg.json b/derivatives/labels/sub-vallHebron04/anat/sub-vallHebron04_space-other_T2star_label-SC_seg.json index 12149af844..8a33146a91 100644 --- a/derivatives/labels/sub-vallHebron04/anat/sub-vallHebron04_space-other_T2star_label-SC_seg.json +++ b/derivatives/labels/sub-vallHebron04/anat/sub-vallHebron04_space-other_T2star_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Yassine El Bouchaibi", - "Date": "2021-07-07 14:39:36" + "Date": "2021-07-07 14:39:36", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-vallHebron04/anat/sub-vallHebron04_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-vallHebron04/anat/sub-vallHebron04_space-other_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-vallHebron04/anat/sub-vallHebron04_space-other_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-vallHebron04/anat/sub-vallHebron04_space-other_T2w_label-SC_seg.json b/derivatives/labels/sub-vallHebron04/anat/sub-vallHebron04_space-other_T2w_label-SC_seg.json index a6b2845f3e..9c402b0c0f 100644 --- a/derivatives/labels/sub-vallHebron04/anat/sub-vallHebron04_space-other_T2w_label-SC_seg.json +++ b/derivatives/labels/sub-vallHebron04/anat/sub-vallHebron04_space-other_T2w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Olivier Morin Lupien", - "Date": "2021-07-24 10:42:34" + "Date": "2021-07-24 10:42:34", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-vallHebron04/dwi/sub-vallHebron04_rec-average_dwi_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-vallHebron04/dwi/sub-vallHebron04_rec-average_dwi_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-vallHebron04/dwi/sub-vallHebron04_rec-average_dwi_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-vallHebron05/anat/sub-vallHebron05_flip-1_mt-on_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-vallHebron05/anat/sub-vallHebron05_flip-1_mt-on_space-other_MTS_label-SC_seg.json index c524206429..a08f266b53 100644 --- a/derivatives/labels/sub-vallHebron05/anat/sub-vallHebron05_flip-1_mt-on_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-vallHebron05/anat/sub-vallHebron05_flip-1_mt-on_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Yassine El Bouchaibi", - "Date": "2021-07-07 14:51:37" + "Date": "2021-07-07 14:51:37", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-vallHebron05/anat/sub-vallHebron05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-vallHebron05/anat/sub-vallHebron05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-vallHebron05/anat/sub-vallHebron05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-vallHebron05/anat/sub-vallHebron05_flip-2_mt-off_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-vallHebron05/anat/sub-vallHebron05_flip-2_mt-off_space-other_MTS_label-SC_seg.json index 07ea8adba1..acc7288f2e 100644 --- a/derivatives/labels/sub-vallHebron05/anat/sub-vallHebron05_flip-2_mt-off_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-vallHebron05/anat/sub-vallHebron05_flip-2_mt-off_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-07-08 12:25:33" + "Date": "2021-07-08 12:25:33", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-vallHebron05/anat/sub-vallHebron05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-vallHebron05/anat/sub-vallHebron05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-vallHebron05/anat/sub-vallHebron05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-vallHebron05/anat/sub-vallHebron05_space-other_T1w_label-SC_seg.json b/derivatives/labels/sub-vallHebron05/anat/sub-vallHebron05_space-other_T1w_label-SC_seg.json index daf47e2bc5..e2d1b25f47 100644 --- a/derivatives/labels/sub-vallHebron05/anat/sub-vallHebron05_space-other_T1w_label-SC_seg.json +++ b/derivatives/labels/sub-vallHebron05/anat/sub-vallHebron05_space-other_T1w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Olivier Morin Lupien", - "Date": "2021-07-24 10:33:53" + "Date": "2021-07-24 10:33:53", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-vallHebron05/anat/sub-vallHebron05_space-other_T2star_label-SC_seg.json b/derivatives/labels/sub-vallHebron05/anat/sub-vallHebron05_space-other_T2star_label-SC_seg.json index f66d5383d1..8dff4c7c63 100644 --- a/derivatives/labels/sub-vallHebron05/anat/sub-vallHebron05_space-other_T2star_label-SC_seg.json +++ b/derivatives/labels/sub-vallHebron05/anat/sub-vallHebron05_space-other_T2star_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-07-08 12:38:25" + "Date": "2021-07-08 12:38:25", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-vallHebron05/anat/sub-vallHebron05_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-vallHebron05/anat/sub-vallHebron05_space-other_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-vallHebron05/anat/sub-vallHebron05_space-other_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-vallHebron05/anat/sub-vallHebron05_space-other_T2w_label-SC_seg.json b/derivatives/labels/sub-vallHebron05/anat/sub-vallHebron05_space-other_T2w_label-SC_seg.json index bfb060b4a0..835048c86b 100644 --- a/derivatives/labels/sub-vallHebron05/anat/sub-vallHebron05_space-other_T2w_label-SC_seg.json +++ b/derivatives/labels/sub-vallHebron05/anat/sub-vallHebron05_space-other_T2w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Yassine El Bouchaibi", - "Date": "2021-07-07 13:57:04" + "Date": "2021-07-07 13:57:04", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-vallHebron05/dwi/sub-vallHebron05_rec-average_dwi_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-vallHebron05/dwi/sub-vallHebron05_rec-average_dwi_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-vallHebron05/dwi/sub-vallHebron05_rec-average_dwi_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-vallHebron06/anat/sub-vallHebron06_flip-1_mt-on_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-vallHebron06/anat/sub-vallHebron06_flip-1_mt-on_space-other_MTS_label-SC_seg.json index 82f8e3edbe..b9aa48698a 100644 --- a/derivatives/labels/sub-vallHebron06/anat/sub-vallHebron06_flip-1_mt-on_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-vallHebron06/anat/sub-vallHebron06_flip-1_mt-on_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:25" + "Date": "2021-06-08 15:06:25", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-vallHebron06/anat/sub-vallHebron06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-vallHebron06/anat/sub-vallHebron06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-vallHebron06/anat/sub-vallHebron06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-vallHebron06/anat/sub-vallHebron06_flip-2_mt-off_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-vallHebron06/anat/sub-vallHebron06_flip-2_mt-off_space-other_MTS_label-SC_seg.json index 1d8ab8f631..995bd4030f 100644 --- a/derivatives/labels/sub-vallHebron06/anat/sub-vallHebron06_flip-2_mt-off_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-vallHebron06/anat/sub-vallHebron06_flip-2_mt-off_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-07-08 12:26:59" + "Date": "2021-07-08 12:26:59", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-vallHebron06/anat/sub-vallHebron06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-vallHebron06/anat/sub-vallHebron06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-vallHebron06/anat/sub-vallHebron06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-vallHebron06/anat/sub-vallHebron06_space-other_T1w_label-SC_seg.json b/derivatives/labels/sub-vallHebron06/anat/sub-vallHebron06_space-other_T1w_label-SC_seg.json index 0659cc01ac..d2ff17a98d 100644 --- a/derivatives/labels/sub-vallHebron06/anat/sub-vallHebron06_space-other_T1w_label-SC_seg.json +++ b/derivatives/labels/sub-vallHebron06/anat/sub-vallHebron06_space-other_T1w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Olivier Morin Lupien", - "Date": "2021-07-24 10:32:32" + "Date": "2021-07-24 10:32:32", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-vallHebron06/anat/sub-vallHebron06_space-other_T2star_label-SC_seg.json b/derivatives/labels/sub-vallHebron06/anat/sub-vallHebron06_space-other_T2star_label-SC_seg.json index 82f8e3edbe..300b32dedf 100644 --- a/derivatives/labels/sub-vallHebron06/anat/sub-vallHebron06_space-other_T2star_label-SC_seg.json +++ b/derivatives/labels/sub-vallHebron06/anat/sub-vallHebron06_space-other_T2star_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:25" + "Date": "2021-06-08 15:06:25", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-vallHebron06/anat/sub-vallHebron06_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-vallHebron06/anat/sub-vallHebron06_space-other_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-vallHebron06/anat/sub-vallHebron06_space-other_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-vallHebron06/anat/sub-vallHebron06_space-other_T2w_label-SC_seg.json b/derivatives/labels/sub-vallHebron06/anat/sub-vallHebron06_space-other_T2w_label-SC_seg.json index 50d79603d6..f0116995e8 100644 --- a/derivatives/labels/sub-vallHebron06/anat/sub-vallHebron06_space-other_T2w_label-SC_seg.json +++ b/derivatives/labels/sub-vallHebron06/anat/sub-vallHebron06_space-other_T2w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-07-08 12:24:06" + "Date": "2021-07-08 12:24:06", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-vallHebron06/dwi/sub-vallHebron06_rec-average_dwi_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-vallHebron06/dwi/sub-vallHebron06_rec-average_dwi_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-vallHebron06/dwi/sub-vallHebron06_rec-average_dwi_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-vallHebron07/anat/sub-vallHebron07_flip-1_mt-on_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-vallHebron07/anat/sub-vallHebron07_flip-1_mt-on_space-other_MTS_label-SC_seg.json index 82f8e3edbe..b9aa48698a 100644 --- a/derivatives/labels/sub-vallHebron07/anat/sub-vallHebron07_flip-1_mt-on_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-vallHebron07/anat/sub-vallHebron07_flip-1_mt-on_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:25" + "Date": "2021-06-08 15:06:25", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-vallHebron07/anat/sub-vallHebron07_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-vallHebron07/anat/sub-vallHebron07_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-vallHebron07/anat/sub-vallHebron07_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-vallHebron07/anat/sub-vallHebron07_flip-2_mt-off_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-vallHebron07/anat/sub-vallHebron07_flip-2_mt-off_space-other_MTS_label-SC_seg.json index 7f2ce8070f..e13bf73dda 100644 --- a/derivatives/labels/sub-vallHebron07/anat/sub-vallHebron07_flip-2_mt-off_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-vallHebron07/anat/sub-vallHebron07_flip-2_mt-off_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-07-08 12:28:52" + "Date": "2021-07-08 12:28:52", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-vallHebron07/anat/sub-vallHebron07_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-vallHebron07/anat/sub-vallHebron07_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-vallHebron07/anat/sub-vallHebron07_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-vallHebron07/anat/sub-vallHebron07_space-other_T1w_label-SC_seg.json b/derivatives/labels/sub-vallHebron07/anat/sub-vallHebron07_space-other_T1w_label-SC_seg.json index c49aad866a..70a6ea8e96 100644 --- a/derivatives/labels/sub-vallHebron07/anat/sub-vallHebron07_space-other_T1w_label-SC_seg.json +++ b/derivatives/labels/sub-vallHebron07/anat/sub-vallHebron07_space-other_T1w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Olivier Morin Lupien", - "Date": "2021-07-24 10:35:12" + "Date": "2021-07-24 10:35:12", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-vallHebron07/anat/sub-vallHebron07_space-other_T2star_label-SC_seg.json b/derivatives/labels/sub-vallHebron07/anat/sub-vallHebron07_space-other_T2star_label-SC_seg.json index 82f8e3edbe..300b32dedf 100644 --- a/derivatives/labels/sub-vallHebron07/anat/sub-vallHebron07_space-other_T2star_label-SC_seg.json +++ b/derivatives/labels/sub-vallHebron07/anat/sub-vallHebron07_space-other_T2star_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:25" + "Date": "2021-06-08 15:06:25", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-vallHebron07/anat/sub-vallHebron07_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-vallHebron07/anat/sub-vallHebron07_space-other_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-vallHebron07/anat/sub-vallHebron07_space-other_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-vallHebron07/anat/sub-vallHebron07_space-other_T2w_label-SC_seg.json b/derivatives/labels/sub-vallHebron07/anat/sub-vallHebron07_space-other_T2w_label-SC_seg.json index 82f8e3edbe..1e4a078f80 100644 --- a/derivatives/labels/sub-vallHebron07/anat/sub-vallHebron07_space-other_T2w_label-SC_seg.json +++ b/derivatives/labels/sub-vallHebron07/anat/sub-vallHebron07_space-other_T2w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:25" + "Date": "2021-06-08 15:06:25", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-vallHebron07/dwi/sub-vallHebron07_rec-average_dwi_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-vallHebron07/dwi/sub-vallHebron07_rec-average_dwi_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-vallHebron07/dwi/sub-vallHebron07_rec-average_dwi_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-vuiisAchieva01/anat/sub-vuiisAchieva01_flip-1_mt-on_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-vuiisAchieva01/anat/sub-vuiisAchieva01_flip-1_mt-on_space-other_MTS_label-SC_seg.json index bd78b1ea94..4a9342d9ec 100644 --- a/derivatives/labels/sub-vuiisAchieva01/anat/sub-vuiisAchieva01_flip-1_mt-on_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-vuiisAchieva01/anat/sub-vuiisAchieva01_flip-1_mt-on_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:26" + "Date": "2021-06-08 15:06:26", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-vuiisAchieva01/anat/sub-vuiisAchieva01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-vuiisAchieva01/anat/sub-vuiisAchieva01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-vuiisAchieva01/anat/sub-vuiisAchieva01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-vuiisAchieva01/anat/sub-vuiisAchieva01_flip-2_mt-off_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-vuiisAchieva01/anat/sub-vuiisAchieva01_flip-2_mt-off_space-other_MTS_label-SC_seg.json index d12f0e6312..0b37b5dfd8 100644 --- a/derivatives/labels/sub-vuiisAchieva01/anat/sub-vuiisAchieva01_flip-2_mt-off_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-vuiisAchieva01/anat/sub-vuiisAchieva01_flip-2_mt-off_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Yassine El Bouchaibi", - "Date": "2021-07-08 17:12:07" + "Date": "2021-07-08 17:12:07", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-vuiisAchieva01/anat/sub-vuiisAchieva01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-vuiisAchieva01/anat/sub-vuiisAchieva01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-vuiisAchieva01/anat/sub-vuiisAchieva01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-vuiisAchieva01/anat/sub-vuiisAchieva01_space-other_T1w_label-SC_seg.json b/derivatives/labels/sub-vuiisAchieva01/anat/sub-vuiisAchieva01_space-other_T1w_label-SC_seg.json index a1037e623a..c4e8eaddf3 100644 --- a/derivatives/labels/sub-vuiisAchieva01/anat/sub-vuiisAchieva01_space-other_T1w_label-SC_seg.json +++ b/derivatives/labels/sub-vuiisAchieva01/anat/sub-vuiisAchieva01_space-other_T1w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-06 10:04:04" + "Date": "2022-10-06 10:04:04", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-vuiisAchieva01/anat/sub-vuiisAchieva01_space-other_T2star_gmlabel-SC_seg.json b/derivatives/labels/sub-vuiisAchieva01/anat/sub-vuiisAchieva01_space-other_T2star_gmlabel-SC_seg.json index 3e830bf0db..58d47c5ed2 100644 --- a/derivatives/labels/sub-vuiisAchieva01/anat/sub-vuiisAchieva01_space-other_T2star_gmlabel-SC_seg.json +++ b/derivatives/labels/sub-vuiisAchieva01/anat/sub-vuiisAchieva01_space-other_T2star_gmlabel-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-03 10:35:23" + "Date": "2021-06-03 10:35:23", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-vuiisAchieva01/anat/sub-vuiisAchieva01_space-other_T2star_label-SC_seg.json b/derivatives/labels/sub-vuiisAchieva01/anat/sub-vuiisAchieva01_space-other_T2star_label-SC_seg.json index f2910c7a71..864600fb25 100644 --- a/derivatives/labels/sub-vuiisAchieva01/anat/sub-vuiisAchieva01_space-other_T2star_label-SC_seg.json +++ b/derivatives/labels/sub-vuiisAchieva01/anat/sub-vuiisAchieva01_space-other_T2star_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Yassine El Bouchaibi", - "Date": "2021-07-08 21:54:00" + "Date": "2021-07-08 21:54:00", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-vuiisAchieva01/anat/sub-vuiisAchieva01_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-vuiisAchieva01/anat/sub-vuiisAchieva01_space-other_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-vuiisAchieva01/anat/sub-vuiisAchieva01_space-other_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-vuiisAchieva01/anat/sub-vuiisAchieva01_space-other_T2w_label-SC_seg.json b/derivatives/labels/sub-vuiisAchieva01/anat/sub-vuiisAchieva01_space-other_T2w_label-SC_seg.json index bd78b1ea94..34521dd34d 100644 --- a/derivatives/labels/sub-vuiisAchieva01/anat/sub-vuiisAchieva01_space-other_T2w_label-SC_seg.json +++ b/derivatives/labels/sub-vuiisAchieva01/anat/sub-vuiisAchieva01_space-other_T2w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:26" + "Date": "2021-06-08 15:06:26", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-vuiisAchieva01/dwi/sub-vuiisAchieva01_rec-average_dwi_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-vuiisAchieva01/dwi/sub-vuiisAchieva01_rec-average_dwi_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-vuiisAchieva01/dwi/sub-vuiisAchieva01_rec-average_dwi_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-vuiisAchieva02/anat/sub-vuiisAchieva02_flip-1_mt-on_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-vuiisAchieva02/anat/sub-vuiisAchieva02_flip-1_mt-on_space-other_MTS_label-SC_seg.json index bd78b1ea94..4a9342d9ec 100644 --- a/derivatives/labels/sub-vuiisAchieva02/anat/sub-vuiisAchieva02_flip-1_mt-on_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-vuiisAchieva02/anat/sub-vuiisAchieva02_flip-1_mt-on_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:26" + "Date": "2021-06-08 15:06:26", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-vuiisAchieva02/anat/sub-vuiisAchieva02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-vuiisAchieva02/anat/sub-vuiisAchieva02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-vuiisAchieva02/anat/sub-vuiisAchieva02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-vuiisAchieva02/anat/sub-vuiisAchieva02_flip-2_mt-off_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-vuiisAchieva02/anat/sub-vuiisAchieva02_flip-2_mt-off_space-other_MTS_label-SC_seg.json index d4422ef523..a3107abe3a 100644 --- a/derivatives/labels/sub-vuiisAchieva02/anat/sub-vuiisAchieva02_flip-2_mt-off_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-vuiisAchieva02/anat/sub-vuiisAchieva02_flip-2_mt-off_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-07-08 12:40:43" + "Date": "2021-07-08 12:40:43", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-vuiisAchieva02/anat/sub-vuiisAchieva02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-vuiisAchieva02/anat/sub-vuiisAchieva02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-vuiisAchieva02/anat/sub-vuiisAchieva02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-vuiisAchieva02/anat/sub-vuiisAchieva02_space-other_T1w_label-SC_seg.json b/derivatives/labels/sub-vuiisAchieva02/anat/sub-vuiisAchieva02_space-other_T1w_label-SC_seg.json index 693ee1bd59..30b2e5c022 100644 --- a/derivatives/labels/sub-vuiisAchieva02/anat/sub-vuiisAchieva02_space-other_T1w_label-SC_seg.json +++ b/derivatives/labels/sub-vuiisAchieva02/anat/sub-vuiisAchieva02_space-other_T1w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Olivier Morin Lupien", - "Date": "2021-07-24 10:39:13" + "Date": "2021-07-24 10:39:13", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-vuiisAchieva02/anat/sub-vuiisAchieva02_space-other_T2star_label-SC_seg.json b/derivatives/labels/sub-vuiisAchieva02/anat/sub-vuiisAchieva02_space-other_T2star_label-SC_seg.json index bd78b1ea94..6ca9aa6155 100644 --- a/derivatives/labels/sub-vuiisAchieva02/anat/sub-vuiisAchieva02_space-other_T2star_label-SC_seg.json +++ b/derivatives/labels/sub-vuiisAchieva02/anat/sub-vuiisAchieva02_space-other_T2star_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:26" + "Date": "2021-06-08 15:06:26", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-vuiisAchieva02/anat/sub-vuiisAchieva02_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-vuiisAchieva02/anat/sub-vuiisAchieva02_space-other_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-vuiisAchieva02/anat/sub-vuiisAchieva02_space-other_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-vuiisAchieva02/anat/sub-vuiisAchieva02_space-other_T2w_label-SC_seg.json b/derivatives/labels/sub-vuiisAchieva02/anat/sub-vuiisAchieva02_space-other_T2w_label-SC_seg.json index 4eb8f1127d..6dd57b05d6 100644 --- a/derivatives/labels/sub-vuiisAchieva02/anat/sub-vuiisAchieva02_space-other_T2w_label-SC_seg.json +++ b/derivatives/labels/sub-vuiisAchieva02/anat/sub-vuiisAchieva02_space-other_T2w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Yassine El Bouchaibi", - "Date": "2021-07-07 14:57:39" + "Date": "2021-07-07 14:57:39", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-vuiisAchieva02/dwi/sub-vuiisAchieva02_rec-average_dwi_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-vuiisAchieva02/dwi/sub-vuiisAchieva02_rec-average_dwi_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-vuiisAchieva02/dwi/sub-vuiisAchieva02_rec-average_dwi_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-vuiisAchieva03/anat/sub-vuiisAchieva03_flip-1_mt-on_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-vuiisAchieva03/anat/sub-vuiisAchieva03_flip-1_mt-on_space-other_MTS_label-SC_seg.json index bd78b1ea94..4a9342d9ec 100644 --- a/derivatives/labels/sub-vuiisAchieva03/anat/sub-vuiisAchieva03_flip-1_mt-on_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-vuiisAchieva03/anat/sub-vuiisAchieva03_flip-1_mt-on_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:26" + "Date": "2021-06-08 15:06:26", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-vuiisAchieva03/anat/sub-vuiisAchieva03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-vuiisAchieva03/anat/sub-vuiisAchieva03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-vuiisAchieva03/anat/sub-vuiisAchieva03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-vuiisAchieva03/anat/sub-vuiisAchieva03_flip-2_mt-off_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-vuiisAchieva03/anat/sub-vuiisAchieva03_flip-2_mt-off_space-other_MTS_label-SC_seg.json index bd78b1ea94..4a9342d9ec 100644 --- a/derivatives/labels/sub-vuiisAchieva03/anat/sub-vuiisAchieva03_flip-2_mt-off_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-vuiisAchieva03/anat/sub-vuiisAchieva03_flip-2_mt-off_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:26" + "Date": "2021-06-08 15:06:26", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-vuiisAchieva03/anat/sub-vuiisAchieva03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-vuiisAchieva03/anat/sub-vuiisAchieva03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-vuiisAchieva03/anat/sub-vuiisAchieva03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-vuiisAchieva03/anat/sub-vuiisAchieva03_space-other_T1w_label-SC_seg.json b/derivatives/labels/sub-vuiisAchieva03/anat/sub-vuiisAchieva03_space-other_T1w_label-SC_seg.json index 6924f1a7ed..d43a20defc 100644 --- a/derivatives/labels/sub-vuiisAchieva03/anat/sub-vuiisAchieva03_space-other_T1w_label-SC_seg.json +++ b/derivatives/labels/sub-vuiisAchieva03/anat/sub-vuiisAchieva03_space-other_T1w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Olivier Morin Lupien", - "Date": "2021-07-24 10:40:55" + "Date": "2021-07-24 10:40:55", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-vuiisAchieva03/anat/sub-vuiisAchieva03_space-other_T2star_label-SC_seg.json b/derivatives/labels/sub-vuiisAchieva03/anat/sub-vuiisAchieva03_space-other_T2star_label-SC_seg.json index bd78b1ea94..6ca9aa6155 100644 --- a/derivatives/labels/sub-vuiisAchieva03/anat/sub-vuiisAchieva03_space-other_T2star_label-SC_seg.json +++ b/derivatives/labels/sub-vuiisAchieva03/anat/sub-vuiisAchieva03_space-other_T2star_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:26" + "Date": "2021-06-08 15:06:26", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-vuiisAchieva03/anat/sub-vuiisAchieva03_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-vuiisAchieva03/anat/sub-vuiisAchieva03_space-other_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-vuiisAchieva03/anat/sub-vuiisAchieva03_space-other_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-vuiisAchieva03/anat/sub-vuiisAchieva03_space-other_T2w_label-SC_seg.json b/derivatives/labels/sub-vuiisAchieva03/anat/sub-vuiisAchieva03_space-other_T2w_label-SC_seg.json index 9b0c85971a..784c104cbb 100644 --- a/derivatives/labels/sub-vuiisAchieva03/anat/sub-vuiisAchieva03_space-other_T2w_label-SC_seg.json +++ b/derivatives/labels/sub-vuiisAchieva03/anat/sub-vuiisAchieva03_space-other_T2w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Yassine El Bouchaibi", - "Date": "2021-07-07 14:59:09" + "Date": "2021-07-07 14:59:09", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-vuiisAchieva03/dwi/sub-vuiisAchieva03_rec-average_dwi_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-vuiisAchieva03/dwi/sub-vuiisAchieva03_rec-average_dwi_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-vuiisAchieva03/dwi/sub-vuiisAchieva03_rec-average_dwi_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-vuiisAchieva04/anat/sub-vuiisAchieva04_flip-1_mt-on_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-vuiisAchieva04/anat/sub-vuiisAchieva04_flip-1_mt-on_space-other_MTS_label-SC_seg.json index 2d042730ad..e411468457 100644 --- a/derivatives/labels/sub-vuiisAchieva04/anat/sub-vuiisAchieva04_flip-1_mt-on_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-vuiisAchieva04/anat/sub-vuiisAchieva04_flip-1_mt-on_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Yassine El Bouchaibi", - "Date": "2021-07-08 21:56:21" + "Date": "2021-07-08 21:56:21", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-vuiisAchieva04/anat/sub-vuiisAchieva04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-vuiisAchieva04/anat/sub-vuiisAchieva04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-vuiisAchieva04/anat/sub-vuiisAchieva04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-vuiisAchieva04/anat/sub-vuiisAchieva04_flip-2_mt-off_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-vuiisAchieva04/anat/sub-vuiisAchieva04_flip-2_mt-off_space-other_MTS_label-SC_seg.json index cf75b7f217..eea7fef732 100644 --- a/derivatives/labels/sub-vuiisAchieva04/anat/sub-vuiisAchieva04_flip-2_mt-off_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-vuiisAchieva04/anat/sub-vuiisAchieva04_flip-2_mt-off_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Yassine El Bouchaibi", - "Date": "2021-07-08 17:38:23" + "Date": "2021-07-08 17:38:23", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-vuiisAchieva04/anat/sub-vuiisAchieva04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-vuiisAchieva04/anat/sub-vuiisAchieva04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-vuiisAchieva04/anat/sub-vuiisAchieva04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-vuiisAchieva04/anat/sub-vuiisAchieva04_space-other_T1w_label-SC_seg.json b/derivatives/labels/sub-vuiisAchieva04/anat/sub-vuiisAchieva04_space-other_T1w_label-SC_seg.json index 29086cb65b..188e411212 100644 --- a/derivatives/labels/sub-vuiisAchieva04/anat/sub-vuiisAchieva04_space-other_T1w_label-SC_seg.json +++ b/derivatives/labels/sub-vuiisAchieva04/anat/sub-vuiisAchieva04_space-other_T1w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-07-08 11:57:36" + "Date": "2021-07-08 11:57:36", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-vuiisAchieva04/anat/sub-vuiisAchieva04_space-other_T2star_label-SC_seg.json b/derivatives/labels/sub-vuiisAchieva04/anat/sub-vuiisAchieva04_space-other_T2star_label-SC_seg.json index bd78b1ea94..6ca9aa6155 100644 --- a/derivatives/labels/sub-vuiisAchieva04/anat/sub-vuiisAchieva04_space-other_T2star_label-SC_seg.json +++ b/derivatives/labels/sub-vuiisAchieva04/anat/sub-vuiisAchieva04_space-other_T2star_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:26" + "Date": "2021-06-08 15:06:26", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-vuiisAchieva04/anat/sub-vuiisAchieva04_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-vuiisAchieva04/anat/sub-vuiisAchieva04_space-other_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-vuiisAchieva04/anat/sub-vuiisAchieva04_space-other_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-vuiisAchieva04/anat/sub-vuiisAchieva04_space-other_T2w_label-SC_seg.json b/derivatives/labels/sub-vuiisAchieva04/anat/sub-vuiisAchieva04_space-other_T2w_label-SC_seg.json index dd2e686907..2d967ec312 100644 --- a/derivatives/labels/sub-vuiisAchieva04/anat/sub-vuiisAchieva04_space-other_T2w_label-SC_seg.json +++ b/derivatives/labels/sub-vuiisAchieva04/anat/sub-vuiisAchieva04_space-other_T2w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Yassine El Bouchaibi", - "Date": "2021-07-07 15:11:34" + "Date": "2021-07-07 15:11:34", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-vuiisAchieva04/dwi/sub-vuiisAchieva04_rec-average_dwi_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-vuiisAchieva04/dwi/sub-vuiisAchieva04_rec-average_dwi_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-vuiisAchieva04/dwi/sub-vuiisAchieva04_rec-average_dwi_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-vuiisAchieva05/anat/sub-vuiisAchieva05_flip-1_mt-on_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-vuiisAchieva05/anat/sub-vuiisAchieva05_flip-1_mt-on_space-other_MTS_label-SC_seg.json index bd78b1ea94..4a9342d9ec 100644 --- a/derivatives/labels/sub-vuiisAchieva05/anat/sub-vuiisAchieva05_flip-1_mt-on_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-vuiisAchieva05/anat/sub-vuiisAchieva05_flip-1_mt-on_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:26" + "Date": "2021-06-08 15:06:26", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-vuiisAchieva05/anat/sub-vuiisAchieva05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-vuiisAchieva05/anat/sub-vuiisAchieva05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-vuiisAchieva05/anat/sub-vuiisAchieva05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-vuiisAchieva05/anat/sub-vuiisAchieva05_flip-2_mt-off_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-vuiisAchieva05/anat/sub-vuiisAchieva05_flip-2_mt-off_space-other_MTS_label-SC_seg.json index e868e43ded..d075b02fcb 100644 --- a/derivatives/labels/sub-vuiisAchieva05/anat/sub-vuiisAchieva05_flip-2_mt-off_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-vuiisAchieva05/anat/sub-vuiisAchieva05_flip-2_mt-off_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Yassine El Bouchaibi", - "Date": "2021-07-08 17:30:15" + "Date": "2021-07-08 17:30:15", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-vuiisAchieva05/anat/sub-vuiisAchieva05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-vuiisAchieva05/anat/sub-vuiisAchieva05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-vuiisAchieva05/anat/sub-vuiisAchieva05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-vuiisAchieva05/anat/sub-vuiisAchieva05_space-other_T1w_label-SC_seg.json b/derivatives/labels/sub-vuiisAchieva05/anat/sub-vuiisAchieva05_space-other_T1w_label-SC_seg.json index c039d37204..3fba24e905 100644 --- a/derivatives/labels/sub-vuiisAchieva05/anat/sub-vuiisAchieva05_space-other_T1w_label-SC_seg.json +++ b/derivatives/labels/sub-vuiisAchieva05/anat/sub-vuiisAchieva05_space-other_T1w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-07-08 12:14:44" + "Date": "2021-07-08 12:14:44", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-vuiisAchieva05/anat/sub-vuiisAchieva05_space-other_T2star_label-SC_seg.json b/derivatives/labels/sub-vuiisAchieva05/anat/sub-vuiisAchieva05_space-other_T2star_label-SC_seg.json index bd78b1ea94..6ca9aa6155 100644 --- a/derivatives/labels/sub-vuiisAchieva05/anat/sub-vuiisAchieva05_space-other_T2star_label-SC_seg.json +++ b/derivatives/labels/sub-vuiisAchieva05/anat/sub-vuiisAchieva05_space-other_T2star_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:26" + "Date": "2021-06-08 15:06:26", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-vuiisAchieva05/anat/sub-vuiisAchieva05_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-vuiisAchieva05/anat/sub-vuiisAchieva05_space-other_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-vuiisAchieva05/anat/sub-vuiisAchieva05_space-other_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-vuiisAchieva05/anat/sub-vuiisAchieva05_space-other_T2w_label-SC_seg.json b/derivatives/labels/sub-vuiisAchieva05/anat/sub-vuiisAchieva05_space-other_T2w_label-SC_seg.json index bd78b1ea94..34521dd34d 100644 --- a/derivatives/labels/sub-vuiisAchieva05/anat/sub-vuiisAchieva05_space-other_T2w_label-SC_seg.json +++ b/derivatives/labels/sub-vuiisAchieva05/anat/sub-vuiisAchieva05_space-other_T2w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:26" + "Date": "2021-06-08 15:06:26", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-vuiisAchieva05/dwi/sub-vuiisAchieva05_rec-average_dwi_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-vuiisAchieva05/dwi/sub-vuiisAchieva05_rec-average_dwi_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-vuiisAchieva05/dwi/sub-vuiisAchieva05_rec-average_dwi_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-vuiisAchieva06/anat/sub-vuiisAchieva06_flip-1_mt-on_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-vuiisAchieva06/anat/sub-vuiisAchieva06_flip-1_mt-on_space-other_MTS_label-SC_seg.json index bd78b1ea94..4a9342d9ec 100644 --- a/derivatives/labels/sub-vuiisAchieva06/anat/sub-vuiisAchieva06_flip-1_mt-on_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-vuiisAchieva06/anat/sub-vuiisAchieva06_flip-1_mt-on_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:26" + "Date": "2021-06-08 15:06:26", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-vuiisAchieva06/anat/sub-vuiisAchieva06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-vuiisAchieva06/anat/sub-vuiisAchieva06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-vuiisAchieva06/anat/sub-vuiisAchieva06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-vuiisAchieva06/anat/sub-vuiisAchieva06_flip-2_mt-off_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-vuiisAchieva06/anat/sub-vuiisAchieva06_flip-2_mt-off_space-other_MTS_label-SC_seg.json index bd78b1ea94..4a9342d9ec 100644 --- a/derivatives/labels/sub-vuiisAchieva06/anat/sub-vuiisAchieva06_flip-2_mt-off_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-vuiisAchieva06/anat/sub-vuiisAchieva06_flip-2_mt-off_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:26" + "Date": "2021-06-08 15:06:26", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-vuiisAchieva06/anat/sub-vuiisAchieva06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-vuiisAchieva06/anat/sub-vuiisAchieva06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-vuiisAchieva06/anat/sub-vuiisAchieva06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-vuiisAchieva06/anat/sub-vuiisAchieva06_space-other_T1w_label-SC_seg.json b/derivatives/labels/sub-vuiisAchieva06/anat/sub-vuiisAchieva06_space-other_T1w_label-SC_seg.json index 02f4e8d1b5..b4a7bd717d 100644 --- a/derivatives/labels/sub-vuiisAchieva06/anat/sub-vuiisAchieva06_space-other_T1w_label-SC_seg.json +++ b/derivatives/labels/sub-vuiisAchieva06/anat/sub-vuiisAchieva06_space-other_T1w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Olivier Morin Lupien", - "Date": "2021-07-24 10:43:35" + "Date": "2021-07-24 10:43:35", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-vuiisAchieva06/anat/sub-vuiisAchieva06_space-other_T2star_label-SC_seg.json b/derivatives/labels/sub-vuiisAchieva06/anat/sub-vuiisAchieva06_space-other_T2star_label-SC_seg.json index bd78b1ea94..6ca9aa6155 100644 --- a/derivatives/labels/sub-vuiisAchieva06/anat/sub-vuiisAchieva06_space-other_T2star_label-SC_seg.json +++ b/derivatives/labels/sub-vuiisAchieva06/anat/sub-vuiisAchieva06_space-other_T2star_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:26" + "Date": "2021-06-08 15:06:26", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-vuiisAchieva06/anat/sub-vuiisAchieva06_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-vuiisAchieva06/anat/sub-vuiisAchieva06_space-other_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-vuiisAchieva06/anat/sub-vuiisAchieva06_space-other_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-vuiisAchieva06/anat/sub-vuiisAchieva06_space-other_T2w_label-SC_seg.json b/derivatives/labels/sub-vuiisAchieva06/anat/sub-vuiisAchieva06_space-other_T2w_label-SC_seg.json index cde120443e..c0e2f1e60f 100644 --- a/derivatives/labels/sub-vuiisAchieva06/anat/sub-vuiisAchieva06_space-other_T2w_label-SC_seg.json +++ b/derivatives/labels/sub-vuiisAchieva06/anat/sub-vuiisAchieva06_space-other_T2w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Yassine El Bouchaibi", - "Date": "2021-07-07 15:06:06" + "Date": "2021-07-07 15:06:06", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-vuiisAchieva06/dwi/sub-vuiisAchieva06_rec-average_dwi_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-vuiisAchieva06/dwi/sub-vuiisAchieva06_rec-average_dwi_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-vuiisAchieva06/dwi/sub-vuiisAchieva06_rec-average_dwi_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-vuiisIngenia01/anat/sub-vuiisIngenia01_flip-1_mt-on_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-vuiisIngenia01/anat/sub-vuiisIngenia01_flip-1_mt-on_space-other_MTS_label-SC_seg.json index bd78b1ea94..4a9342d9ec 100644 --- a/derivatives/labels/sub-vuiisIngenia01/anat/sub-vuiisIngenia01_flip-1_mt-on_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-vuiisIngenia01/anat/sub-vuiisIngenia01_flip-1_mt-on_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:26" + "Date": "2021-06-08 15:06:26", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-vuiisIngenia01/anat/sub-vuiisIngenia01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-vuiisIngenia01/anat/sub-vuiisIngenia01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-vuiisIngenia01/anat/sub-vuiisIngenia01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-vuiisIngenia01/anat/sub-vuiisIngenia01_flip-2_mt-off_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-vuiisIngenia01/anat/sub-vuiisIngenia01_flip-2_mt-off_space-other_MTS_label-SC_seg.json index bd78b1ea94..4a9342d9ec 100644 --- a/derivatives/labels/sub-vuiisIngenia01/anat/sub-vuiisIngenia01_flip-2_mt-off_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-vuiisIngenia01/anat/sub-vuiisIngenia01_flip-2_mt-off_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:26" + "Date": "2021-06-08 15:06:26", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-vuiisIngenia01/anat/sub-vuiisIngenia01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-vuiisIngenia01/anat/sub-vuiisIngenia01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-vuiisIngenia01/anat/sub-vuiisIngenia01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-vuiisIngenia01/anat/sub-vuiisIngenia01_space-other_T1w_label-SC_seg.json b/derivatives/labels/sub-vuiisIngenia01/anat/sub-vuiisIngenia01_space-other_T1w_label-SC_seg.json index f40e798dc0..52ead53273 100644 --- a/derivatives/labels/sub-vuiisIngenia01/anat/sub-vuiisIngenia01_space-other_T1w_label-SC_seg.json +++ b/derivatives/labels/sub-vuiisIngenia01/anat/sub-vuiisIngenia01_space-other_T1w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Olivier Morin Lupien", - "Date": "2021-07-24 10:45:45" + "Date": "2021-07-24 10:45:45", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-vuiisIngenia01/anat/sub-vuiisIngenia01_space-other_T2star_label-SC_seg.json b/derivatives/labels/sub-vuiisIngenia01/anat/sub-vuiisIngenia01_space-other_T2star_label-SC_seg.json index bd78b1ea94..6ca9aa6155 100644 --- a/derivatives/labels/sub-vuiisIngenia01/anat/sub-vuiisIngenia01_space-other_T2star_label-SC_seg.json +++ b/derivatives/labels/sub-vuiisIngenia01/anat/sub-vuiisIngenia01_space-other_T2star_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:26" + "Date": "2021-06-08 15:06:26", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-vuiisIngenia01/anat/sub-vuiisIngenia01_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-vuiisIngenia01/anat/sub-vuiisIngenia01_space-other_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-vuiisIngenia01/anat/sub-vuiisIngenia01_space-other_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-vuiisIngenia01/anat/sub-vuiisIngenia01_space-other_T2w_label-SC_seg.json b/derivatives/labels/sub-vuiisIngenia01/anat/sub-vuiisIngenia01_space-other_T2w_label-SC_seg.json index 13083dc663..5d1a3bb44f 100644 --- a/derivatives/labels/sub-vuiisIngenia01/anat/sub-vuiisIngenia01_space-other_T2w_label-SC_seg.json +++ b/derivatives/labels/sub-vuiisIngenia01/anat/sub-vuiisIngenia01_space-other_T2w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Yassine El Bouchaibi", - "Date": "2021-07-07 15:01:07" + "Date": "2021-07-07 15:01:07", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-vuiisIngenia01/dwi/sub-vuiisIngenia01_rec-average_dwi_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-vuiisIngenia01/dwi/sub-vuiisIngenia01_rec-average_dwi_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-vuiisIngenia01/dwi/sub-vuiisIngenia01_rec-average_dwi_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-vuiisIngenia02/anat/sub-vuiisIngenia02_flip-1_mt-on_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-vuiisIngenia02/anat/sub-vuiisIngenia02_flip-1_mt-on_space-other_MTS_label-SC_seg.json index bd78b1ea94..4a9342d9ec 100644 --- a/derivatives/labels/sub-vuiisIngenia02/anat/sub-vuiisIngenia02_flip-1_mt-on_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-vuiisIngenia02/anat/sub-vuiisIngenia02_flip-1_mt-on_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:26" + "Date": "2021-06-08 15:06:26", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-vuiisIngenia02/anat/sub-vuiisIngenia02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-vuiisIngenia02/anat/sub-vuiisIngenia02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-vuiisIngenia02/anat/sub-vuiisIngenia02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-vuiisIngenia02/anat/sub-vuiisIngenia02_flip-2_mt-off_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-vuiisIngenia02/anat/sub-vuiisIngenia02_flip-2_mt-off_space-other_MTS_label-SC_seg.json index a415702bc0..2094f4dacb 100644 --- a/derivatives/labels/sub-vuiisIngenia02/anat/sub-vuiisIngenia02_flip-2_mt-off_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-vuiisIngenia02/anat/sub-vuiisIngenia02_flip-2_mt-off_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Yassine El Bouchaibi", - "Date": "2021-07-08 21:49:24" + "Date": "2021-07-08 21:49:24", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-vuiisIngenia02/anat/sub-vuiisIngenia02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-vuiisIngenia02/anat/sub-vuiisIngenia02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-vuiisIngenia02/anat/sub-vuiisIngenia02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-vuiisIngenia02/anat/sub-vuiisIngenia02_space-other_T1w_label-SC_seg.json b/derivatives/labels/sub-vuiisIngenia02/anat/sub-vuiisIngenia02_space-other_T1w_label-SC_seg.json index 8e52651d06..c236786dd0 100644 --- a/derivatives/labels/sub-vuiisIngenia02/anat/sub-vuiisIngenia02_space-other_T1w_label-SC_seg.json +++ b/derivatives/labels/sub-vuiisIngenia02/anat/sub-vuiisIngenia02_space-other_T1w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Yassine El Bouchaibi", - "Date": "2021-07-07 13:28:08" + "Date": "2021-07-07 13:28:08", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-vuiisIngenia02/anat/sub-vuiisIngenia02_space-other_T2star_label-SC_seg.json b/derivatives/labels/sub-vuiisIngenia02/anat/sub-vuiisIngenia02_space-other_T2star_label-SC_seg.json index bd78b1ea94..6ca9aa6155 100644 --- a/derivatives/labels/sub-vuiisIngenia02/anat/sub-vuiisIngenia02_space-other_T2star_label-SC_seg.json +++ b/derivatives/labels/sub-vuiisIngenia02/anat/sub-vuiisIngenia02_space-other_T2star_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:26" + "Date": "2021-06-08 15:06:26", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-vuiisIngenia02/anat/sub-vuiisIngenia02_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-vuiisIngenia02/anat/sub-vuiisIngenia02_space-other_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-vuiisIngenia02/anat/sub-vuiisIngenia02_space-other_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-vuiisIngenia02/anat/sub-vuiisIngenia02_space-other_T2w_label-SC_seg.json b/derivatives/labels/sub-vuiisIngenia02/anat/sub-vuiisIngenia02_space-other_T2w_label-SC_seg.json index 790ad058a5..2e31ffec6c 100644 --- a/derivatives/labels/sub-vuiisIngenia02/anat/sub-vuiisIngenia02_space-other_T2w_label-SC_seg.json +++ b/derivatives/labels/sub-vuiisIngenia02/anat/sub-vuiisIngenia02_space-other_T2w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Yassine El Bouchaibi", - "Date": "2021-07-07 15:14:46" + "Date": "2021-07-07 15:14:46", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-vuiisIngenia02/dwi/sub-vuiisIngenia02_rec-average_dwi_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-vuiisIngenia02/dwi/sub-vuiisIngenia02_rec-average_dwi_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-vuiisIngenia02/dwi/sub-vuiisIngenia02_rec-average_dwi_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-vuiisIngenia03/anat/sub-vuiisIngenia03_flip-1_mt-on_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-vuiisIngenia03/anat/sub-vuiisIngenia03_flip-1_mt-on_space-other_MTS_label-SC_seg.json index e22f925b2c..d86bef3304 100644 --- a/derivatives/labels/sub-vuiisIngenia03/anat/sub-vuiisIngenia03_flip-1_mt-on_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-vuiisIngenia03/anat/sub-vuiisIngenia03_flip-1_mt-on_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:27" + "Date": "2021-06-08 15:06:27", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-vuiisIngenia03/anat/sub-vuiisIngenia03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-vuiisIngenia03/anat/sub-vuiisIngenia03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-vuiisIngenia03/anat/sub-vuiisIngenia03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-vuiisIngenia03/anat/sub-vuiisIngenia03_flip-2_mt-off_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-vuiisIngenia03/anat/sub-vuiisIngenia03_flip-2_mt-off_space-other_MTS_label-SC_seg.json index 29fdf612c4..060a4540f9 100644 --- a/derivatives/labels/sub-vuiisIngenia03/anat/sub-vuiisIngenia03_flip-2_mt-off_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-vuiisIngenia03/anat/sub-vuiisIngenia03_flip-2_mt-off_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-07-12 15:04:20" + "Date": "2021-07-12 15:04:20", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-vuiisIngenia03/anat/sub-vuiisIngenia03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-vuiisIngenia03/anat/sub-vuiisIngenia03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-vuiisIngenia03/anat/sub-vuiisIngenia03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-vuiisIngenia03/anat/sub-vuiisIngenia03_space-other_T1w_label-SC_seg.json b/derivatives/labels/sub-vuiisIngenia03/anat/sub-vuiisIngenia03_space-other_T1w_label-SC_seg.json index 78d5810522..e0b5ccc89a 100644 --- a/derivatives/labels/sub-vuiisIngenia03/anat/sub-vuiisIngenia03_space-other_T1w_label-SC_seg.json +++ b/derivatives/labels/sub-vuiisIngenia03/anat/sub-vuiisIngenia03_space-other_T1w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Yassine El Bouchaibi", - "Date": "2021-07-07 14:28:21" + "Date": "2021-07-07 14:28:21", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-vuiisIngenia03/anat/sub-vuiisIngenia03_space-other_T2star_gmlabel-SC_seg.json b/derivatives/labels/sub-vuiisIngenia03/anat/sub-vuiisIngenia03_space-other_T2star_gmlabel-SC_seg.json index 6e2bd03e2f..3ca7f81c55 100644 --- a/derivatives/labels/sub-vuiisIngenia03/anat/sub-vuiisIngenia03_space-other_T2star_gmlabel-SC_seg.json +++ b/derivatives/labels/sub-vuiisIngenia03/anat/sub-vuiisIngenia03_space-other_T2star_gmlabel-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-03 10:35:19" + "Date": "2021-06-03 10:35:19", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-vuiisIngenia03/anat/sub-vuiisIngenia03_space-other_T2star_label-SC_seg.json b/derivatives/labels/sub-vuiisIngenia03/anat/sub-vuiisIngenia03_space-other_T2star_label-SC_seg.json index e22f925b2c..399ef20316 100644 --- a/derivatives/labels/sub-vuiisIngenia03/anat/sub-vuiisIngenia03_space-other_T2star_label-SC_seg.json +++ b/derivatives/labels/sub-vuiisIngenia03/anat/sub-vuiisIngenia03_space-other_T2star_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:27" + "Date": "2021-06-08 15:06:27", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-vuiisIngenia03/anat/sub-vuiisIngenia03_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-vuiisIngenia03/anat/sub-vuiisIngenia03_space-other_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-vuiisIngenia03/anat/sub-vuiisIngenia03_space-other_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-vuiisIngenia03/anat/sub-vuiisIngenia03_space-other_T2w_label-SC_seg.json b/derivatives/labels/sub-vuiisIngenia03/anat/sub-vuiisIngenia03_space-other_T2w_label-SC_seg.json index 0fcd72be10..b36d537de5 100644 --- a/derivatives/labels/sub-vuiisIngenia03/anat/sub-vuiisIngenia03_space-other_T2w_label-SC_seg.json +++ b/derivatives/labels/sub-vuiisIngenia03/anat/sub-vuiisIngenia03_space-other_T2w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Yassine El Bouchaibi", - "Date": "2021-07-08 17:27:34" + "Date": "2021-07-08 17:27:34", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-vuiisIngenia03/dwi/sub-vuiisIngenia03_rec-average_dwi_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-vuiisIngenia03/dwi/sub-vuiisIngenia03_rec-average_dwi_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-vuiisIngenia03/dwi/sub-vuiisIngenia03_rec-average_dwi_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-vuiisIngenia04/anat/sub-vuiisIngenia04_flip-1_mt-on_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-vuiisIngenia04/anat/sub-vuiisIngenia04_flip-1_mt-on_space-other_MTS_label-SC_seg.json index e22f925b2c..d86bef3304 100644 --- a/derivatives/labels/sub-vuiisIngenia04/anat/sub-vuiisIngenia04_flip-1_mt-on_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-vuiisIngenia04/anat/sub-vuiisIngenia04_flip-1_mt-on_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:27" + "Date": "2021-06-08 15:06:27", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-vuiisIngenia04/anat/sub-vuiisIngenia04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-vuiisIngenia04/anat/sub-vuiisIngenia04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-vuiisIngenia04/anat/sub-vuiisIngenia04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-vuiisIngenia04/anat/sub-vuiisIngenia04_flip-2_mt-off_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-vuiisIngenia04/anat/sub-vuiisIngenia04_flip-2_mt-off_space-other_MTS_label-SC_seg.json index ae61381f5f..b2e9389f18 100644 --- a/derivatives/labels/sub-vuiisIngenia04/anat/sub-vuiisIngenia04_flip-2_mt-off_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-vuiisIngenia04/anat/sub-vuiisIngenia04_flip-2_mt-off_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-07-12 15:03:51" + "Date": "2021-07-12 15:03:51", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-vuiisIngenia04/anat/sub-vuiisIngenia04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-vuiisIngenia04/anat/sub-vuiisIngenia04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-vuiisIngenia04/anat/sub-vuiisIngenia04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-vuiisIngenia04/anat/sub-vuiisIngenia04_space-other_T1w_label-SC_seg.json b/derivatives/labels/sub-vuiisIngenia04/anat/sub-vuiisIngenia04_space-other_T1w_label-SC_seg.json index 4d812ffc5d..0241443a22 100644 --- a/derivatives/labels/sub-vuiisIngenia04/anat/sub-vuiisIngenia04_space-other_T1w_label-SC_seg.json +++ b/derivatives/labels/sub-vuiisIngenia04/anat/sub-vuiisIngenia04_space-other_T1w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-07-08 12:22:51" + "Date": "2021-07-08 12:22:51", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-vuiisIngenia04/anat/sub-vuiisIngenia04_space-other_T2star_label-SC_seg.json b/derivatives/labels/sub-vuiisIngenia04/anat/sub-vuiisIngenia04_space-other_T2star_label-SC_seg.json index e22f925b2c..399ef20316 100644 --- a/derivatives/labels/sub-vuiisIngenia04/anat/sub-vuiisIngenia04_space-other_T2star_label-SC_seg.json +++ b/derivatives/labels/sub-vuiisIngenia04/anat/sub-vuiisIngenia04_space-other_T2star_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:27" + "Date": "2021-06-08 15:06:27", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-vuiisIngenia04/anat/sub-vuiisIngenia04_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-vuiisIngenia04/anat/sub-vuiisIngenia04_space-other_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-vuiisIngenia04/anat/sub-vuiisIngenia04_space-other_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-vuiisIngenia04/anat/sub-vuiisIngenia04_space-other_T2w_label-SC_seg.json b/derivatives/labels/sub-vuiisIngenia04/anat/sub-vuiisIngenia04_space-other_T2w_label-SC_seg.json index e22f925b2c..24dcf3dcd3 100644 --- a/derivatives/labels/sub-vuiisIngenia04/anat/sub-vuiisIngenia04_space-other_T2w_label-SC_seg.json +++ b/derivatives/labels/sub-vuiisIngenia04/anat/sub-vuiisIngenia04_space-other_T2w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:27" + "Date": "2021-06-08 15:06:27", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-vuiisIngenia04/dwi/sub-vuiisIngenia04_rec-average_dwi_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-vuiisIngenia04/dwi/sub-vuiisIngenia04_rec-average_dwi_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-vuiisIngenia04/dwi/sub-vuiisIngenia04_rec-average_dwi_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-vuiisIngenia05/anat/sub-vuiisIngenia05_flip-1_mt-on_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-vuiisIngenia05/anat/sub-vuiisIngenia05_flip-1_mt-on_space-other_MTS_label-SC_seg.json index 15dabbe82d..1a4041b76a 100644 --- a/derivatives/labels/sub-vuiisIngenia05/anat/sub-vuiisIngenia05_flip-1_mt-on_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-vuiisIngenia05/anat/sub-vuiisIngenia05_flip-1_mt-on_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Yassine El Bouchaibi", - "Date": "2021-07-08 21:59:05" + "Date": "2021-07-08 21:59:05", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-vuiisIngenia05/anat/sub-vuiisIngenia05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-vuiisIngenia05/anat/sub-vuiisIngenia05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-vuiisIngenia05/anat/sub-vuiisIngenia05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-vuiisIngenia05/anat/sub-vuiisIngenia05_flip-2_mt-off_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-vuiisIngenia05/anat/sub-vuiisIngenia05_flip-2_mt-off_space-other_MTS_label-SC_seg.json index d9eea35e09..188debc786 100644 --- a/derivatives/labels/sub-vuiisIngenia05/anat/sub-vuiisIngenia05_flip-2_mt-off_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-vuiisIngenia05/anat/sub-vuiisIngenia05_flip-2_mt-off_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Yassine El Bouchaibi", - "Date": "2021-07-08 21:50:57" + "Date": "2021-07-08 21:50:57", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-vuiisIngenia05/anat/sub-vuiisIngenia05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-vuiisIngenia05/anat/sub-vuiisIngenia05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-vuiisIngenia05/anat/sub-vuiisIngenia05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-vuiisIngenia05/anat/sub-vuiisIngenia05_space-other_T1w_label-SC_seg.json b/derivatives/labels/sub-vuiisIngenia05/anat/sub-vuiisIngenia05_space-other_T1w_label-SC_seg.json index 37b0172f5c..1b8a83e322 100644 --- a/derivatives/labels/sub-vuiisIngenia05/anat/sub-vuiisIngenia05_space-other_T1w_label-SC_seg.json +++ b/derivatives/labels/sub-vuiisIngenia05/anat/sub-vuiisIngenia05_space-other_T1w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Yassine El Bouchaibi", - "Date": "2021-07-07 13:35:44" + "Date": "2021-07-07 13:35:44", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-vuiisIngenia05/anat/sub-vuiisIngenia05_space-other_T2star_label-SC_seg.json b/derivatives/labels/sub-vuiisIngenia05/anat/sub-vuiisIngenia05_space-other_T2star_label-SC_seg.json index e22f925b2c..399ef20316 100644 --- a/derivatives/labels/sub-vuiisIngenia05/anat/sub-vuiisIngenia05_space-other_T2star_label-SC_seg.json +++ b/derivatives/labels/sub-vuiisIngenia05/anat/sub-vuiisIngenia05_space-other_T2star_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:27" + "Date": "2021-06-08 15:06:27", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-vuiisIngenia05/anat/sub-vuiisIngenia05_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-vuiisIngenia05/anat/sub-vuiisIngenia05_space-other_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-vuiisIngenia05/anat/sub-vuiisIngenia05_space-other_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-vuiisIngenia05/anat/sub-vuiisIngenia05_space-other_T2w_label-SC_seg.json b/derivatives/labels/sub-vuiisIngenia05/anat/sub-vuiisIngenia05_space-other_T2w_label-SC_seg.json index 8196639cd1..99558df0de 100644 --- a/derivatives/labels/sub-vuiisIngenia05/anat/sub-vuiisIngenia05_space-other_T2w_label-SC_seg.json +++ b/derivatives/labels/sub-vuiisIngenia05/anat/sub-vuiisIngenia05_space-other_T2w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Paul Bautin", - "Date": "2020-07-30 10:13:33" + "Date": "2020-07-30 10:13:33", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-vuiisIngenia05/dwi/sub-vuiisIngenia05_rec-average_dwi_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-vuiisIngenia05/dwi/sub-vuiisIngenia05_rec-average_dwi_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-vuiisIngenia05/dwi/sub-vuiisIngenia05_rec-average_dwi_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-vuiisIngenia06/anat/sub-vuiisIngenia06_flip-1_mt-on_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-vuiisIngenia06/anat/sub-vuiisIngenia06_flip-1_mt-on_space-other_MTS_label-SC_seg.json index e22f925b2c..d86bef3304 100644 --- a/derivatives/labels/sub-vuiisIngenia06/anat/sub-vuiisIngenia06_flip-1_mt-on_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-vuiisIngenia06/anat/sub-vuiisIngenia06_flip-1_mt-on_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:27" + "Date": "2021-06-08 15:06:27", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-vuiisIngenia06/anat/sub-vuiisIngenia06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-vuiisIngenia06/anat/sub-vuiisIngenia06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-vuiisIngenia06/anat/sub-vuiisIngenia06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-vuiisIngenia06/anat/sub-vuiisIngenia06_flip-2_mt-off_space-other_MTS_label-SC_seg.json b/derivatives/labels/sub-vuiisIngenia06/anat/sub-vuiisIngenia06_flip-2_mt-off_space-other_MTS_label-SC_seg.json index e22f925b2c..d86bef3304 100644 --- a/derivatives/labels/sub-vuiisIngenia06/anat/sub-vuiisIngenia06_flip-2_mt-off_space-other_MTS_label-SC_seg.json +++ b/derivatives/labels/sub-vuiisIngenia06/anat/sub-vuiisIngenia06_flip-2_mt-off_space-other_MTS_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:27" + "Date": "2021-06-08 15:06:27", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-vuiisIngenia06/anat/sub-vuiisIngenia06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-vuiisIngenia06/anat/sub-vuiisIngenia06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-vuiisIngenia06/anat/sub-vuiisIngenia06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-vuiisIngenia06/anat/sub-vuiisIngenia06_space-other_T1w_label-SC_seg.json b/derivatives/labels/sub-vuiisIngenia06/anat/sub-vuiisIngenia06_space-other_T1w_label-SC_seg.json index 28282a1630..b67f11ae3d 100644 --- a/derivatives/labels/sub-vuiisIngenia06/anat/sub-vuiisIngenia06_space-other_T1w_label-SC_seg.json +++ b/derivatives/labels/sub-vuiisIngenia06/anat/sub-vuiisIngenia06_space-other_T1w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Yassine El Bouchaibi", - "Date": "2021-07-07 14:33:53" + "Date": "2021-07-07 14:33:53", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-vuiisIngenia06/anat/sub-vuiisIngenia06_space-other_T2star_label-SC_seg.json b/derivatives/labels/sub-vuiisIngenia06/anat/sub-vuiisIngenia06_space-other_T2star_label-SC_seg.json index e22f925b2c..399ef20316 100644 --- a/derivatives/labels/sub-vuiisIngenia06/anat/sub-vuiisIngenia06_space-other_T2star_label-SC_seg.json +++ b/derivatives/labels/sub-vuiisIngenia06/anat/sub-vuiisIngenia06_space-other_T2star_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:27" + "Date": "2021-06-08 15:06:27", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-vuiisIngenia06/anat/sub-vuiisIngenia06_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-vuiisIngenia06/anat/sub-vuiisIngenia06_space-other_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..d17e7a9167 --- /dev/null +++ b/derivatives/labels/sub-vuiisIngenia06/anat/sub-vuiisIngenia06_space-other_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,12 @@ +{ + "SpatialReference": { + "Orientation": "RPI" + }, + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-vuiisIngenia06/anat/sub-vuiisIngenia06_space-other_T2w_label-SC_seg.json b/derivatives/labels/sub-vuiisIngenia06/anat/sub-vuiisIngenia06_space-other_T2w_label-SC_seg.json index e22f925b2c..24dcf3dcd3 100644 --- a/derivatives/labels/sub-vuiisIngenia06/anat/sub-vuiisIngenia06_space-other_T2w_label-SC_seg.json +++ b/derivatives/labels/sub-vuiisIngenia06/anat/sub-vuiisIngenia06_space-other_T2w_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-06-08 15:06:27" + "Date": "2021-06-08 15:06:27", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels/sub-vuiisIngenia06/dwi/sub-vuiisIngenia06_rec-average_dwi_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-vuiisIngenia06/dwi/sub-vuiisIngenia06_rec-average_dwi_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-vuiisIngenia06/dwi/sub-vuiisIngenia06_rec-average_dwi_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-amu01/anat/sub-amu01_flip-1_mt-on_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-amu01/anat/sub-amu01_flip-1_mt-on_space-other_MTS_label-SC_softseg.json index 8190f8bf00..05e09500c1 100644 --- a/derivatives/labels_softseg/sub-amu01/anat/sub-amu01_flip-1_mt-on_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-amu01/anat/sub-amu01_flip-1_mt-on_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:35:59" + "Date": "2022-10-22 14:35:59", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-amu01/anat/sub-amu01_flip-2_mt-off_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-amu01/anat/sub-amu01_flip-2_mt-off_space-other_MTS_label-SC_softseg.json index 8190f8bf00..05e09500c1 100644 --- a/derivatives/labels_softseg/sub-amu01/anat/sub-amu01_flip-2_mt-off_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-amu01/anat/sub-amu01_flip-2_mt-off_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:35:59" + "Date": "2022-10-22 14:35:59", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-amu01/anat/sub-amu01_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-amu01/anat/sub-amu01_space-other_T1w_label-SC_softseg.json index 8190f8bf00..e3b901fc65 100644 --- a/derivatives/labels_softseg/sub-amu01/anat/sub-amu01_space-other_T1w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-amu01/anat/sub-amu01_space-other_T1w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:35:59" + "Date": "2022-10-22 14:35:59", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-amu01/anat/sub-amu01_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-amu01/anat/sub-amu01_space-other_T2star_label-SC_softseg.json index 8190f8bf00..517f317a87 100644 --- a/derivatives/labels_softseg/sub-amu01/anat/sub-amu01_space-other_T2star_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-amu01/anat/sub-amu01_space-other_T2star_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:35:59" + "Date": "2022-10-22 14:35:59", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-amu01/anat/sub-amu01_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-amu01/anat/sub-amu01_space-other_T2w_label-SC_softseg.json index 8190f8bf00..8377974b6f 100644 --- a/derivatives/labels_softseg/sub-amu01/anat/sub-amu01_space-other_T2w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-amu01/anat/sub-amu01_space-other_T2w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:35:59" + "Date": "2022-10-22 14:35:59", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-amu02/anat/sub-amu02_flip-1_mt-on_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-amu02/anat/sub-amu02_flip-1_mt-on_space-other_MTS_label-SC_softseg.json index 8190f8bf00..05e09500c1 100644 --- a/derivatives/labels_softseg/sub-amu02/anat/sub-amu02_flip-1_mt-on_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-amu02/anat/sub-amu02_flip-1_mt-on_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:35:59" + "Date": "2022-10-22 14:35:59", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-amu02/anat/sub-amu02_flip-2_mt-off_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-amu02/anat/sub-amu02_flip-2_mt-off_space-other_MTS_label-SC_softseg.json index 8190f8bf00..05e09500c1 100644 --- a/derivatives/labels_softseg/sub-amu02/anat/sub-amu02_flip-2_mt-off_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-amu02/anat/sub-amu02_flip-2_mt-off_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:35:59" + "Date": "2022-10-22 14:35:59", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-amu02/anat/sub-amu02_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-amu02/anat/sub-amu02_space-other_T1w_label-SC_softseg.json index 8190f8bf00..e3b901fc65 100644 --- a/derivatives/labels_softseg/sub-amu02/anat/sub-amu02_space-other_T1w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-amu02/anat/sub-amu02_space-other_T1w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:35:59" + "Date": "2022-10-22 14:35:59", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-amu02/anat/sub-amu02_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-amu02/anat/sub-amu02_space-other_T2star_label-SC_softseg.json index 8190f8bf00..517f317a87 100644 --- a/derivatives/labels_softseg/sub-amu02/anat/sub-amu02_space-other_T2star_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-amu02/anat/sub-amu02_space-other_T2star_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:35:59" + "Date": "2022-10-22 14:35:59", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-amu02/anat/sub-amu02_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-amu02/anat/sub-amu02_space-other_T2w_label-SC_softseg.json index 8190f8bf00..8377974b6f 100644 --- a/derivatives/labels_softseg/sub-amu02/anat/sub-amu02_space-other_T2w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-amu02/anat/sub-amu02_space-other_T2w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:35:59" + "Date": "2022-10-22 14:35:59", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-amu03/anat/sub-amu03_flip-1_mt-on_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-amu03/anat/sub-amu03_flip-1_mt-on_space-other_MTS_label-SC_softseg.json index 8190f8bf00..05e09500c1 100644 --- a/derivatives/labels_softseg/sub-amu03/anat/sub-amu03_flip-1_mt-on_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-amu03/anat/sub-amu03_flip-1_mt-on_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:35:59" + "Date": "2022-10-22 14:35:59", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-amu03/anat/sub-amu03_flip-2_mt-off_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-amu03/anat/sub-amu03_flip-2_mt-off_space-other_MTS_label-SC_softseg.json index 8190f8bf00..05e09500c1 100644 --- a/derivatives/labels_softseg/sub-amu03/anat/sub-amu03_flip-2_mt-off_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-amu03/anat/sub-amu03_flip-2_mt-off_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:35:59" + "Date": "2022-10-22 14:35:59", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-amu03/anat/sub-amu03_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-amu03/anat/sub-amu03_space-other_T1w_label-SC_softseg.json index 8190f8bf00..e3b901fc65 100644 --- a/derivatives/labels_softseg/sub-amu03/anat/sub-amu03_space-other_T1w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-amu03/anat/sub-amu03_space-other_T1w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:35:59" + "Date": "2022-10-22 14:35:59", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-amu03/anat/sub-amu03_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-amu03/anat/sub-amu03_space-other_T2star_label-SC_softseg.json index 8190f8bf00..517f317a87 100644 --- a/derivatives/labels_softseg/sub-amu03/anat/sub-amu03_space-other_T2star_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-amu03/anat/sub-amu03_space-other_T2star_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:35:59" + "Date": "2022-10-22 14:35:59", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-amu03/anat/sub-amu03_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-amu03/anat/sub-amu03_space-other_T2w_label-SC_softseg.json index 8190f8bf00..8377974b6f 100644 --- a/derivatives/labels_softseg/sub-amu03/anat/sub-amu03_space-other_T2w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-amu03/anat/sub-amu03_space-other_T2w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:35:59" + "Date": "2022-10-22 14:35:59", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-amu04/anat/sub-amu04_flip-1_mt-on_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-amu04/anat/sub-amu04_flip-1_mt-on_space-other_MTS_label-SC_softseg.json index 8190f8bf00..05e09500c1 100644 --- a/derivatives/labels_softseg/sub-amu04/anat/sub-amu04_flip-1_mt-on_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-amu04/anat/sub-amu04_flip-1_mt-on_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:35:59" + "Date": "2022-10-22 14:35:59", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-amu04/anat/sub-amu04_flip-2_mt-off_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-amu04/anat/sub-amu04_flip-2_mt-off_space-other_MTS_label-SC_softseg.json index 8190f8bf00..05e09500c1 100644 --- a/derivatives/labels_softseg/sub-amu04/anat/sub-amu04_flip-2_mt-off_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-amu04/anat/sub-amu04_flip-2_mt-off_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:35:59" + "Date": "2022-10-22 14:35:59", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-amu04/anat/sub-amu04_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-amu04/anat/sub-amu04_space-other_T1w_label-SC_softseg.json index 8190f8bf00..e3b901fc65 100644 --- a/derivatives/labels_softseg/sub-amu04/anat/sub-amu04_space-other_T1w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-amu04/anat/sub-amu04_space-other_T1w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:35:59" + "Date": "2022-10-22 14:35:59", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-amu04/anat/sub-amu04_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-amu04/anat/sub-amu04_space-other_T2star_label-SC_softseg.json index 8190f8bf00..517f317a87 100644 --- a/derivatives/labels_softseg/sub-amu04/anat/sub-amu04_space-other_T2star_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-amu04/anat/sub-amu04_space-other_T2star_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:35:59" + "Date": "2022-10-22 14:35:59", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-amu04/anat/sub-amu04_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-amu04/anat/sub-amu04_space-other_T2w_label-SC_softseg.json index 19fed7e193..873b44b59d 100644 --- a/derivatives/labels_softseg/sub-amu04/anat/sub-amu04_space-other_T2w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-amu04/anat/sub-amu04_space-other_T2w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:00" + "Date": "2022-10-22 14:36:00", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-amu05/anat/sub-amu05_flip-1_mt-on_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-amu05/anat/sub-amu05_flip-1_mt-on_space-other_MTS_label-SC_softseg.json index 19fed7e193..0aa8f7ebad 100644 --- a/derivatives/labels_softseg/sub-amu05/anat/sub-amu05_flip-1_mt-on_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-amu05/anat/sub-amu05_flip-1_mt-on_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:00" + "Date": "2022-10-22 14:36:00", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-amu05/anat/sub-amu05_flip-2_mt-off_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-amu05/anat/sub-amu05_flip-2_mt-off_space-other_MTS_label-SC_softseg.json index 19fed7e193..0aa8f7ebad 100644 --- a/derivatives/labels_softseg/sub-amu05/anat/sub-amu05_flip-2_mt-off_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-amu05/anat/sub-amu05_flip-2_mt-off_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:00" + "Date": "2022-10-22 14:36:00", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-amu05/anat/sub-amu05_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-amu05/anat/sub-amu05_space-other_T1w_label-SC_softseg.json index 19fed7e193..82ca064032 100644 --- a/derivatives/labels_softseg/sub-amu05/anat/sub-amu05_space-other_T1w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-amu05/anat/sub-amu05_space-other_T1w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:00" + "Date": "2022-10-22 14:36:00", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-amu05/anat/sub-amu05_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-amu05/anat/sub-amu05_space-other_T2star_label-SC_softseg.json index 19fed7e193..70cd26abf6 100644 --- a/derivatives/labels_softseg/sub-amu05/anat/sub-amu05_space-other_T2star_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-amu05/anat/sub-amu05_space-other_T2star_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:00" + "Date": "2022-10-22 14:36:00", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-amu05/anat/sub-amu05_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-amu05/anat/sub-amu05_space-other_T2w_label-SC_softseg.json index 19fed7e193..873b44b59d 100644 --- a/derivatives/labels_softseg/sub-amu05/anat/sub-amu05_space-other_T2w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-amu05/anat/sub-amu05_space-other_T2w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:00" + "Date": "2022-10-22 14:36:00", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-balgrist01/anat/sub-balgrist01_flip-1_mt-on_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-balgrist01/anat/sub-balgrist01_flip-1_mt-on_space-other_MTS_label-SC_softseg.json index 19fed7e193..0aa8f7ebad 100644 --- a/derivatives/labels_softseg/sub-balgrist01/anat/sub-balgrist01_flip-1_mt-on_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-balgrist01/anat/sub-balgrist01_flip-1_mt-on_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:00" + "Date": "2022-10-22 14:36:00", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-balgrist01/anat/sub-balgrist01_flip-2_mt-off_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-balgrist01/anat/sub-balgrist01_flip-2_mt-off_space-other_MTS_label-SC_softseg.json index 19fed7e193..0aa8f7ebad 100644 --- a/derivatives/labels_softseg/sub-balgrist01/anat/sub-balgrist01_flip-2_mt-off_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-balgrist01/anat/sub-balgrist01_flip-2_mt-off_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:00" + "Date": "2022-10-22 14:36:00", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-balgrist01/anat/sub-balgrist01_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-balgrist01/anat/sub-balgrist01_space-other_T1w_label-SC_softseg.json index 19fed7e193..82ca064032 100644 --- a/derivatives/labels_softseg/sub-balgrist01/anat/sub-balgrist01_space-other_T1w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-balgrist01/anat/sub-balgrist01_space-other_T1w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:00" + "Date": "2022-10-22 14:36:00", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-balgrist01/anat/sub-balgrist01_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-balgrist01/anat/sub-balgrist01_space-other_T2star_label-SC_softseg.json index 19fed7e193..70cd26abf6 100644 --- a/derivatives/labels_softseg/sub-balgrist01/anat/sub-balgrist01_space-other_T2star_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-balgrist01/anat/sub-balgrist01_space-other_T2star_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:00" + "Date": "2022-10-22 14:36:00", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-balgrist01/anat/sub-balgrist01_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-balgrist01/anat/sub-balgrist01_space-other_T2w_label-SC_softseg.json index 19fed7e193..873b44b59d 100644 --- a/derivatives/labels_softseg/sub-balgrist01/anat/sub-balgrist01_space-other_T2w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-balgrist01/anat/sub-balgrist01_space-other_T2w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:00" + "Date": "2022-10-22 14:36:00", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-balgrist02/anat/sub-balgrist02_flip-1_mt-on_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-balgrist02/anat/sub-balgrist02_flip-1_mt-on_space-other_MTS_label-SC_softseg.json index 19fed7e193..0aa8f7ebad 100644 --- a/derivatives/labels_softseg/sub-balgrist02/anat/sub-balgrist02_flip-1_mt-on_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-balgrist02/anat/sub-balgrist02_flip-1_mt-on_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:00" + "Date": "2022-10-22 14:36:00", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-balgrist02/anat/sub-balgrist02_flip-2_mt-off_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-balgrist02/anat/sub-balgrist02_flip-2_mt-off_space-other_MTS_label-SC_softseg.json index 19fed7e193..0aa8f7ebad 100644 --- a/derivatives/labels_softseg/sub-balgrist02/anat/sub-balgrist02_flip-2_mt-off_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-balgrist02/anat/sub-balgrist02_flip-2_mt-off_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:00" + "Date": "2022-10-22 14:36:00", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-balgrist02/anat/sub-balgrist02_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-balgrist02/anat/sub-balgrist02_space-other_T1w_label-SC_softseg.json index 19fed7e193..82ca064032 100644 --- a/derivatives/labels_softseg/sub-balgrist02/anat/sub-balgrist02_space-other_T1w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-balgrist02/anat/sub-balgrist02_space-other_T1w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:00" + "Date": "2022-10-22 14:36:00", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-balgrist02/anat/sub-balgrist02_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-balgrist02/anat/sub-balgrist02_space-other_T2star_label-SC_softseg.json index 19fed7e193..70cd26abf6 100644 --- a/derivatives/labels_softseg/sub-balgrist02/anat/sub-balgrist02_space-other_T2star_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-balgrist02/anat/sub-balgrist02_space-other_T2star_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:00" + "Date": "2022-10-22 14:36:00", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-balgrist02/anat/sub-balgrist02_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-balgrist02/anat/sub-balgrist02_space-other_T2w_label-SC_softseg.json index 19fed7e193..873b44b59d 100644 --- a/derivatives/labels_softseg/sub-balgrist02/anat/sub-balgrist02_space-other_T2w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-balgrist02/anat/sub-balgrist02_space-other_T2w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:00" + "Date": "2022-10-22 14:36:00", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-balgrist03/anat/sub-balgrist03_flip-1_mt-on_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-balgrist03/anat/sub-balgrist03_flip-1_mt-on_space-other_MTS_label-SC_softseg.json index 19fed7e193..0aa8f7ebad 100644 --- a/derivatives/labels_softseg/sub-balgrist03/anat/sub-balgrist03_flip-1_mt-on_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-balgrist03/anat/sub-balgrist03_flip-1_mt-on_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:00" + "Date": "2022-10-22 14:36:00", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-balgrist03/anat/sub-balgrist03_flip-2_mt-off_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-balgrist03/anat/sub-balgrist03_flip-2_mt-off_space-other_MTS_label-SC_softseg.json index 19fed7e193..0aa8f7ebad 100644 --- a/derivatives/labels_softseg/sub-balgrist03/anat/sub-balgrist03_flip-2_mt-off_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-balgrist03/anat/sub-balgrist03_flip-2_mt-off_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:00" + "Date": "2022-10-22 14:36:00", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-balgrist03/anat/sub-balgrist03_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-balgrist03/anat/sub-balgrist03_space-other_T1w_label-SC_softseg.json index 19fed7e193..82ca064032 100644 --- a/derivatives/labels_softseg/sub-balgrist03/anat/sub-balgrist03_space-other_T1w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-balgrist03/anat/sub-balgrist03_space-other_T1w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:00" + "Date": "2022-10-22 14:36:00", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-balgrist03/anat/sub-balgrist03_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-balgrist03/anat/sub-balgrist03_space-other_T2star_label-SC_softseg.json index 19fed7e193..70cd26abf6 100644 --- a/derivatives/labels_softseg/sub-balgrist03/anat/sub-balgrist03_space-other_T2star_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-balgrist03/anat/sub-balgrist03_space-other_T2star_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:00" + "Date": "2022-10-22 14:36:00", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-balgrist03/anat/sub-balgrist03_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-balgrist03/anat/sub-balgrist03_space-other_T2w_label-SC_softseg.json index 6d0515abc8..4153c0f0f0 100644 --- a/derivatives/labels_softseg/sub-balgrist03/anat/sub-balgrist03_space-other_T2w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-balgrist03/anat/sub-balgrist03_space-other_T2w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:01" + "Date": "2022-10-22 14:36:01", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-balgrist04/anat/sub-balgrist04_flip-1_mt-on_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-balgrist04/anat/sub-balgrist04_flip-1_mt-on_space-other_MTS_label-SC_softseg.json index 6d0515abc8..e3147c3d95 100644 --- a/derivatives/labels_softseg/sub-balgrist04/anat/sub-balgrist04_flip-1_mt-on_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-balgrist04/anat/sub-balgrist04_flip-1_mt-on_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:01" + "Date": "2022-10-22 14:36:01", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-balgrist04/anat/sub-balgrist04_flip-2_mt-off_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-balgrist04/anat/sub-balgrist04_flip-2_mt-off_space-other_MTS_label-SC_softseg.json index 6d0515abc8..e3147c3d95 100644 --- a/derivatives/labels_softseg/sub-balgrist04/anat/sub-balgrist04_flip-2_mt-off_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-balgrist04/anat/sub-balgrist04_flip-2_mt-off_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:01" + "Date": "2022-10-22 14:36:01", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-balgrist04/anat/sub-balgrist04_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-balgrist04/anat/sub-balgrist04_space-other_T1w_label-SC_softseg.json index 6d0515abc8..b726e941ea 100644 --- a/derivatives/labels_softseg/sub-balgrist04/anat/sub-balgrist04_space-other_T1w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-balgrist04/anat/sub-balgrist04_space-other_T1w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:01" + "Date": "2022-10-22 14:36:01", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-balgrist04/anat/sub-balgrist04_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-balgrist04/anat/sub-balgrist04_space-other_T2star_label-SC_softseg.json index 6d0515abc8..06335586a9 100644 --- a/derivatives/labels_softseg/sub-balgrist04/anat/sub-balgrist04_space-other_T2star_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-balgrist04/anat/sub-balgrist04_space-other_T2star_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:01" + "Date": "2022-10-22 14:36:01", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-balgrist04/anat/sub-balgrist04_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-balgrist04/anat/sub-balgrist04_space-other_T2w_label-SC_softseg.json index 6d0515abc8..4153c0f0f0 100644 --- a/derivatives/labels_softseg/sub-balgrist04/anat/sub-balgrist04_space-other_T2w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-balgrist04/anat/sub-balgrist04_space-other_T2w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:01" + "Date": "2022-10-22 14:36:01", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-balgrist05/anat/sub-balgrist05_flip-1_mt-on_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-balgrist05/anat/sub-balgrist05_flip-1_mt-on_space-other_MTS_label-SC_softseg.json index 6d0515abc8..e3147c3d95 100644 --- a/derivatives/labels_softseg/sub-balgrist05/anat/sub-balgrist05_flip-1_mt-on_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-balgrist05/anat/sub-balgrist05_flip-1_mt-on_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:01" + "Date": "2022-10-22 14:36:01", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-balgrist05/anat/sub-balgrist05_flip-2_mt-off_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-balgrist05/anat/sub-balgrist05_flip-2_mt-off_space-other_MTS_label-SC_softseg.json index 6d0515abc8..e3147c3d95 100644 --- a/derivatives/labels_softseg/sub-balgrist05/anat/sub-balgrist05_flip-2_mt-off_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-balgrist05/anat/sub-balgrist05_flip-2_mt-off_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:01" + "Date": "2022-10-22 14:36:01", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-balgrist05/anat/sub-balgrist05_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-balgrist05/anat/sub-balgrist05_space-other_T1w_label-SC_softseg.json index 6d0515abc8..b726e941ea 100644 --- a/derivatives/labels_softseg/sub-balgrist05/anat/sub-balgrist05_space-other_T1w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-balgrist05/anat/sub-balgrist05_space-other_T1w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:01" + "Date": "2022-10-22 14:36:01", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-balgrist05/anat/sub-balgrist05_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-balgrist05/anat/sub-balgrist05_space-other_T2star_label-SC_softseg.json index 6d0515abc8..06335586a9 100644 --- a/derivatives/labels_softseg/sub-balgrist05/anat/sub-balgrist05_space-other_T2star_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-balgrist05/anat/sub-balgrist05_space-other_T2star_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:01" + "Date": "2022-10-22 14:36:01", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-balgrist05/anat/sub-balgrist05_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-balgrist05/anat/sub-balgrist05_space-other_T2w_label-SC_softseg.json index 6d0515abc8..4153c0f0f0 100644 --- a/derivatives/labels_softseg/sub-balgrist05/anat/sub-balgrist05_space-other_T2w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-balgrist05/anat/sub-balgrist05_space-other_T2w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:01" + "Date": "2022-10-22 14:36:01", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-balgrist06/anat/sub-balgrist06_flip-1_mt-on_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-balgrist06/anat/sub-balgrist06_flip-1_mt-on_space-other_MTS_label-SC_softseg.json index 6d0515abc8..e3147c3d95 100644 --- a/derivatives/labels_softseg/sub-balgrist06/anat/sub-balgrist06_flip-1_mt-on_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-balgrist06/anat/sub-balgrist06_flip-1_mt-on_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:01" + "Date": "2022-10-22 14:36:01", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-balgrist06/anat/sub-balgrist06_flip-2_mt-off_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-balgrist06/anat/sub-balgrist06_flip-2_mt-off_space-other_MTS_label-SC_softseg.json index 6d0515abc8..e3147c3d95 100644 --- a/derivatives/labels_softseg/sub-balgrist06/anat/sub-balgrist06_flip-2_mt-off_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-balgrist06/anat/sub-balgrist06_flip-2_mt-off_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:01" + "Date": "2022-10-22 14:36:01", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-balgrist06/anat/sub-balgrist06_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-balgrist06/anat/sub-balgrist06_space-other_T1w_label-SC_softseg.json index 6d0515abc8..b726e941ea 100644 --- a/derivatives/labels_softseg/sub-balgrist06/anat/sub-balgrist06_space-other_T1w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-balgrist06/anat/sub-balgrist06_space-other_T1w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:01" + "Date": "2022-10-22 14:36:01", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-balgrist06/anat/sub-balgrist06_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-balgrist06/anat/sub-balgrist06_space-other_T2star_label-SC_softseg.json index 6d0515abc8..06335586a9 100644 --- a/derivatives/labels_softseg/sub-balgrist06/anat/sub-balgrist06_space-other_T2star_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-balgrist06/anat/sub-balgrist06_space-other_T2star_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:01" + "Date": "2022-10-22 14:36:01", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-balgrist06/anat/sub-balgrist06_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-balgrist06/anat/sub-balgrist06_space-other_T2w_label-SC_softseg.json index 6d0515abc8..4153c0f0f0 100644 --- a/derivatives/labels_softseg/sub-balgrist06/anat/sub-balgrist06_space-other_T2w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-balgrist06/anat/sub-balgrist06_space-other_T2w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:01" + "Date": "2022-10-22 14:36:01", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-barcelona01/anat/sub-barcelona01_flip-1_mt-on_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-barcelona01/anat/sub-barcelona01_flip-1_mt-on_space-other_MTS_label-SC_softseg.json index b87a891800..204635e79f 100644 --- a/derivatives/labels_softseg/sub-barcelona01/anat/sub-barcelona01_flip-1_mt-on_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-barcelona01/anat/sub-barcelona01_flip-1_mt-on_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:02" + "Date": "2022-10-22 14:36:02", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-barcelona01/anat/sub-barcelona01_flip-2_mt-off_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-barcelona01/anat/sub-barcelona01_flip-2_mt-off_space-other_MTS_label-SC_softseg.json index b87a891800..204635e79f 100644 --- a/derivatives/labels_softseg/sub-barcelona01/anat/sub-barcelona01_flip-2_mt-off_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-barcelona01/anat/sub-barcelona01_flip-2_mt-off_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:02" + "Date": "2022-10-22 14:36:02", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-barcelona01/anat/sub-barcelona01_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-barcelona01/anat/sub-barcelona01_space-other_T1w_label-SC_softseg.json index b87a891800..81390240d3 100644 --- a/derivatives/labels_softseg/sub-barcelona01/anat/sub-barcelona01_space-other_T1w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-barcelona01/anat/sub-barcelona01_space-other_T1w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:02" + "Date": "2022-10-22 14:36:02", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-barcelona01/anat/sub-barcelona01_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-barcelona01/anat/sub-barcelona01_space-other_T2star_label-SC_softseg.json index b87a891800..aec905b363 100644 --- a/derivatives/labels_softseg/sub-barcelona01/anat/sub-barcelona01_space-other_T2star_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-barcelona01/anat/sub-barcelona01_space-other_T2star_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:02" + "Date": "2022-10-22 14:36:02", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-barcelona01/anat/sub-barcelona01_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-barcelona01/anat/sub-barcelona01_space-other_T2w_label-SC_softseg.json index b87a891800..c5f83524c8 100644 --- a/derivatives/labels_softseg/sub-barcelona01/anat/sub-barcelona01_space-other_T2w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-barcelona01/anat/sub-barcelona01_space-other_T2w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:02" + "Date": "2022-10-22 14:36:02", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-barcelona02/anat/sub-barcelona02_flip-1_mt-on_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-barcelona02/anat/sub-barcelona02_flip-1_mt-on_space-other_MTS_label-SC_softseg.json index b87a891800..204635e79f 100644 --- a/derivatives/labels_softseg/sub-barcelona02/anat/sub-barcelona02_flip-1_mt-on_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-barcelona02/anat/sub-barcelona02_flip-1_mt-on_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:02" + "Date": "2022-10-22 14:36:02", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-barcelona02/anat/sub-barcelona02_flip-2_mt-off_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-barcelona02/anat/sub-barcelona02_flip-2_mt-off_space-other_MTS_label-SC_softseg.json index b87a891800..204635e79f 100644 --- a/derivatives/labels_softseg/sub-barcelona02/anat/sub-barcelona02_flip-2_mt-off_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-barcelona02/anat/sub-barcelona02_flip-2_mt-off_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:02" + "Date": "2022-10-22 14:36:02", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-barcelona02/anat/sub-barcelona02_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-barcelona02/anat/sub-barcelona02_space-other_T1w_label-SC_softseg.json index b87a891800..81390240d3 100644 --- a/derivatives/labels_softseg/sub-barcelona02/anat/sub-barcelona02_space-other_T1w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-barcelona02/anat/sub-barcelona02_space-other_T1w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:02" + "Date": "2022-10-22 14:36:02", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-barcelona02/anat/sub-barcelona02_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-barcelona02/anat/sub-barcelona02_space-other_T2star_label-SC_softseg.json index b87a891800..aec905b363 100644 --- a/derivatives/labels_softseg/sub-barcelona02/anat/sub-barcelona02_space-other_T2star_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-barcelona02/anat/sub-barcelona02_space-other_T2star_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:02" + "Date": "2022-10-22 14:36:02", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-barcelona02/anat/sub-barcelona02_space-other_T2w.json b/derivatives/labels_softseg/sub-barcelona02/anat/sub-barcelona02_space-other_T2w.json index ec98c037ab..28187b8a10 100644 --- a/derivatives/labels_softseg/sub-barcelona02/anat/sub-barcelona02_space-other_T2w.json +++ b/derivatives/labels_softseg/sub-barcelona02/anat/sub-barcelona02_space-other_T2w.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-09-05 18:49:36" + "Date": "2021-09-05 18:49:36", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-barcelona02/anat/sub-barcelona02_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-barcelona02/anat/sub-barcelona02_space-other_T2w_label-SC_softseg.json index b87a891800..c5f83524c8 100644 --- a/derivatives/labels_softseg/sub-barcelona02/anat/sub-barcelona02_space-other_T2w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-barcelona02/anat/sub-barcelona02_space-other_T2w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:02" + "Date": "2022-10-22 14:36:02", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-barcelona03/anat/sub-barcelona03_flip-1_mt-on_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-barcelona03/anat/sub-barcelona03_flip-1_mt-on_space-other_MTS_label-SC_softseg.json index b87a891800..204635e79f 100644 --- a/derivatives/labels_softseg/sub-barcelona03/anat/sub-barcelona03_flip-1_mt-on_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-barcelona03/anat/sub-barcelona03_flip-1_mt-on_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:02" + "Date": "2022-10-22 14:36:02", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-barcelona03/anat/sub-barcelona03_flip-2_mt-off_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-barcelona03/anat/sub-barcelona03_flip-2_mt-off_space-other_MTS_label-SC_softseg.json index b87a891800..204635e79f 100644 --- a/derivatives/labels_softseg/sub-barcelona03/anat/sub-barcelona03_flip-2_mt-off_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-barcelona03/anat/sub-barcelona03_flip-2_mt-off_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:02" + "Date": "2022-10-22 14:36:02", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-barcelona03/anat/sub-barcelona03_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-barcelona03/anat/sub-barcelona03_space-other_T1w_label-SC_softseg.json index b87a891800..81390240d3 100644 --- a/derivatives/labels_softseg/sub-barcelona03/anat/sub-barcelona03_space-other_T1w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-barcelona03/anat/sub-barcelona03_space-other_T1w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:02" + "Date": "2022-10-22 14:36:02", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-barcelona03/anat/sub-barcelona03_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-barcelona03/anat/sub-barcelona03_space-other_T2star_label-SC_softseg.json index b87a891800..aec905b363 100644 --- a/derivatives/labels_softseg/sub-barcelona03/anat/sub-barcelona03_space-other_T2star_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-barcelona03/anat/sub-barcelona03_space-other_T2star_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:02" + "Date": "2022-10-22 14:36:02", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-barcelona03/anat/sub-barcelona03_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-barcelona03/anat/sub-barcelona03_space-other_T2w_label-SC_softseg.json index b87a891800..c5f83524c8 100644 --- a/derivatives/labels_softseg/sub-barcelona03/anat/sub-barcelona03_space-other_T2w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-barcelona03/anat/sub-barcelona03_space-other_T2w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:02" + "Date": "2022-10-22 14:36:02", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-barcelona04/anat/sub-barcelona04_flip-1_mt-on_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-barcelona04/anat/sub-barcelona04_flip-1_mt-on_space-other_MTS_label-SC_softseg.json index b87a891800..204635e79f 100644 --- a/derivatives/labels_softseg/sub-barcelona04/anat/sub-barcelona04_flip-1_mt-on_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-barcelona04/anat/sub-barcelona04_flip-1_mt-on_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:02" + "Date": "2022-10-22 14:36:02", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-barcelona04/anat/sub-barcelona04_flip-2_mt-off_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-barcelona04/anat/sub-barcelona04_flip-2_mt-off_space-other_MTS_label-SC_softseg.json index b87a891800..204635e79f 100644 --- a/derivatives/labels_softseg/sub-barcelona04/anat/sub-barcelona04_flip-2_mt-off_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-barcelona04/anat/sub-barcelona04_flip-2_mt-off_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:02" + "Date": "2022-10-22 14:36:02", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-barcelona04/anat/sub-barcelona04_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-barcelona04/anat/sub-barcelona04_space-other_T1w_label-SC_softseg.json index b87a891800..81390240d3 100644 --- a/derivatives/labels_softseg/sub-barcelona04/anat/sub-barcelona04_space-other_T1w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-barcelona04/anat/sub-barcelona04_space-other_T1w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:02" + "Date": "2022-10-22 14:36:02", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-barcelona04/anat/sub-barcelona04_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-barcelona04/anat/sub-barcelona04_space-other_T2star_label-SC_softseg.json index d1b0b64203..a2a1441fab 100644 --- a/derivatives/labels_softseg/sub-barcelona04/anat/sub-barcelona04_space-other_T2star_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-barcelona04/anat/sub-barcelona04_space-other_T2star_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:03" + "Date": "2022-10-22 14:36:03", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-barcelona04/anat/sub-barcelona04_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-barcelona04/anat/sub-barcelona04_space-other_T2w_label-SC_softseg.json index d1b0b64203..05d4b3f325 100644 --- a/derivatives/labels_softseg/sub-barcelona04/anat/sub-barcelona04_space-other_T2w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-barcelona04/anat/sub-barcelona04_space-other_T2w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:03" + "Date": "2022-10-22 14:36:03", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-barcelona05/anat/sub-barcelona05_flip-1_mt-on_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-barcelona05/anat/sub-barcelona05_flip-1_mt-on_space-other_MTS_label-SC_softseg.json index d1b0b64203..458073cf27 100644 --- a/derivatives/labels_softseg/sub-barcelona05/anat/sub-barcelona05_flip-1_mt-on_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-barcelona05/anat/sub-barcelona05_flip-1_mt-on_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:03" + "Date": "2022-10-22 14:36:03", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-barcelona05/anat/sub-barcelona05_flip-2_mt-off_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-barcelona05/anat/sub-barcelona05_flip-2_mt-off_space-other_MTS_label-SC_softseg.json index d1b0b64203..458073cf27 100644 --- a/derivatives/labels_softseg/sub-barcelona05/anat/sub-barcelona05_flip-2_mt-off_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-barcelona05/anat/sub-barcelona05_flip-2_mt-off_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:03" + "Date": "2022-10-22 14:36:03", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-barcelona05/anat/sub-barcelona05_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-barcelona05/anat/sub-barcelona05_space-other_T1w_label-SC_softseg.json index d1b0b64203..a2b67812c1 100644 --- a/derivatives/labels_softseg/sub-barcelona05/anat/sub-barcelona05_space-other_T1w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-barcelona05/anat/sub-barcelona05_space-other_T1w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:03" + "Date": "2022-10-22 14:36:03", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-barcelona05/anat/sub-barcelona05_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-barcelona05/anat/sub-barcelona05_space-other_T2star_label-SC_softseg.json index d1b0b64203..a2a1441fab 100644 --- a/derivatives/labels_softseg/sub-barcelona05/anat/sub-barcelona05_space-other_T2star_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-barcelona05/anat/sub-barcelona05_space-other_T2star_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:03" + "Date": "2022-10-22 14:36:03", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-barcelona05/anat/sub-barcelona05_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-barcelona05/anat/sub-barcelona05_space-other_T2w_label-SC_softseg.json index d1b0b64203..05d4b3f325 100644 --- a/derivatives/labels_softseg/sub-barcelona05/anat/sub-barcelona05_space-other_T2w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-barcelona05/anat/sub-barcelona05_space-other_T2w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:03" + "Date": "2022-10-22 14:36:03", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-barcelona06/anat/sub-barcelona06_flip-1_mt-on_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-barcelona06/anat/sub-barcelona06_flip-1_mt-on_space-other_MTS_label-SC_softseg.json index d1b0b64203..458073cf27 100644 --- a/derivatives/labels_softseg/sub-barcelona06/anat/sub-barcelona06_flip-1_mt-on_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-barcelona06/anat/sub-barcelona06_flip-1_mt-on_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:03" + "Date": "2022-10-22 14:36:03", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-barcelona06/anat/sub-barcelona06_flip-2_mt-off_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-barcelona06/anat/sub-barcelona06_flip-2_mt-off_space-other_MTS_label-SC_softseg.json index d1b0b64203..458073cf27 100644 --- a/derivatives/labels_softseg/sub-barcelona06/anat/sub-barcelona06_flip-2_mt-off_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-barcelona06/anat/sub-barcelona06_flip-2_mt-off_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:03" + "Date": "2022-10-22 14:36:03", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-barcelona06/anat/sub-barcelona06_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-barcelona06/anat/sub-barcelona06_space-other_T1w_label-SC_softseg.json index d1b0b64203..a2b67812c1 100644 --- a/derivatives/labels_softseg/sub-barcelona06/anat/sub-barcelona06_space-other_T1w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-barcelona06/anat/sub-barcelona06_space-other_T1w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:03" + "Date": "2022-10-22 14:36:03", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-barcelona06/anat/sub-barcelona06_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-barcelona06/anat/sub-barcelona06_space-other_T2star_label-SC_softseg.json index d1b0b64203..a2a1441fab 100644 --- a/derivatives/labels_softseg/sub-barcelona06/anat/sub-barcelona06_space-other_T2star_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-barcelona06/anat/sub-barcelona06_space-other_T2star_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:03" + "Date": "2022-10-22 14:36:03", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-barcelona06/anat/sub-barcelona06_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-barcelona06/anat/sub-barcelona06_space-other_T2w_label-SC_softseg.json index d1b0b64203..05d4b3f325 100644 --- a/derivatives/labels_softseg/sub-barcelona06/anat/sub-barcelona06_space-other_T2w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-barcelona06/anat/sub-barcelona06_space-other_T2w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:03" + "Date": "2022-10-22 14:36:03", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-beijingGE01/anat/sub-beijingGE01_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-beijingGE01/anat/sub-beijingGE01_space-other_T1w_label-SC_softseg.json index d1b0b64203..a2b67812c1 100644 --- a/derivatives/labels_softseg/sub-beijingGE01/anat/sub-beijingGE01_space-other_T1w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-beijingGE01/anat/sub-beijingGE01_space-other_T1w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:03" + "Date": "2022-10-22 14:36:03", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-beijingGE01/anat/sub-beijingGE01_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-beijingGE01/anat/sub-beijingGE01_space-other_T2star_label-SC_softseg.json index d1b0b64203..a2a1441fab 100644 --- a/derivatives/labels_softseg/sub-beijingGE01/anat/sub-beijingGE01_space-other_T2star_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-beijingGE01/anat/sub-beijingGE01_space-other_T2star_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:03" + "Date": "2022-10-22 14:36:03", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-beijingGE01/anat/sub-beijingGE01_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-beijingGE01/anat/sub-beijingGE01_space-other_T2w_label-SC_softseg.json index d1b0b64203..05d4b3f325 100644 --- a/derivatives/labels_softseg/sub-beijingGE01/anat/sub-beijingGE01_space-other_T2w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-beijingGE01/anat/sub-beijingGE01_space-other_T2w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:03" + "Date": "2022-10-22 14:36:03", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-beijingGE02/anat/sub-beijingGE02_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-beijingGE02/anat/sub-beijingGE02_space-other_T1w_label-SC_softseg.json index d1b0b64203..a2b67812c1 100644 --- a/derivatives/labels_softseg/sub-beijingGE02/anat/sub-beijingGE02_space-other_T1w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-beijingGE02/anat/sub-beijingGE02_space-other_T1w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:03" + "Date": "2022-10-22 14:36:03", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-beijingGE02/anat/sub-beijingGE02_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-beijingGE02/anat/sub-beijingGE02_space-other_T2star_label-SC_softseg.json index d1b0b64203..a2a1441fab 100644 --- a/derivatives/labels_softseg/sub-beijingGE02/anat/sub-beijingGE02_space-other_T2star_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-beijingGE02/anat/sub-beijingGE02_space-other_T2star_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:03" + "Date": "2022-10-22 14:36:03", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-beijingGE02/anat/sub-beijingGE02_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-beijingGE02/anat/sub-beijingGE02_space-other_T2w_label-SC_softseg.json index d1b0b64203..05d4b3f325 100644 --- a/derivatives/labels_softseg/sub-beijingGE02/anat/sub-beijingGE02_space-other_T2w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-beijingGE02/anat/sub-beijingGE02_space-other_T2w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:03" + "Date": "2022-10-22 14:36:03", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-beijingGE03/anat/sub-beijingGE03_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-beijingGE03/anat/sub-beijingGE03_space-other_T1w_label-SC_softseg.json index c0903d718d..7370fccd52 100644 --- a/derivatives/labels_softseg/sub-beijingGE03/anat/sub-beijingGE03_space-other_T1w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-beijingGE03/anat/sub-beijingGE03_space-other_T1w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:04" + "Date": "2022-10-22 14:36:04", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-beijingGE03/anat/sub-beijingGE03_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-beijingGE03/anat/sub-beijingGE03_space-other_T2star_label-SC_softseg.json index c0903d718d..078a8d963d 100644 --- a/derivatives/labels_softseg/sub-beijingGE03/anat/sub-beijingGE03_space-other_T2star_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-beijingGE03/anat/sub-beijingGE03_space-other_T2star_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:04" + "Date": "2022-10-22 14:36:04", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-beijingGE03/anat/sub-beijingGE03_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-beijingGE03/anat/sub-beijingGE03_space-other_T2w_label-SC_softseg.json index c0903d718d..c897218fac 100644 --- a/derivatives/labels_softseg/sub-beijingGE03/anat/sub-beijingGE03_space-other_T2w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-beijingGE03/anat/sub-beijingGE03_space-other_T2w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:04" + "Date": "2022-10-22 14:36:04", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-beijingGE04/anat/sub-beijingGE04_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-beijingGE04/anat/sub-beijingGE04_space-other_T1w_label-SC_softseg.json index c0903d718d..7370fccd52 100644 --- a/derivatives/labels_softseg/sub-beijingGE04/anat/sub-beijingGE04_space-other_T1w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-beijingGE04/anat/sub-beijingGE04_space-other_T1w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:04" + "Date": "2022-10-22 14:36:04", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-beijingGE04/anat/sub-beijingGE04_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-beijingGE04/anat/sub-beijingGE04_space-other_T2star_label-SC_softseg.json index c0903d718d..078a8d963d 100644 --- a/derivatives/labels_softseg/sub-beijingGE04/anat/sub-beijingGE04_space-other_T2star_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-beijingGE04/anat/sub-beijingGE04_space-other_T2star_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:04" + "Date": "2022-10-22 14:36:04", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-beijingGE04/anat/sub-beijingGE04_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-beijingGE04/anat/sub-beijingGE04_space-other_T2w_label-SC_softseg.json index c0903d718d..c897218fac 100644 --- a/derivatives/labels_softseg/sub-beijingGE04/anat/sub-beijingGE04_space-other_T2w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-beijingGE04/anat/sub-beijingGE04_space-other_T2w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:04" + "Date": "2022-10-22 14:36:04", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-beijingPrisma01/anat/sub-beijingPrisma01_flip-1_mt-on_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-beijingPrisma01/anat/sub-beijingPrisma01_flip-1_mt-on_space-other_MTS_label-SC_softseg.json index c0903d718d..b5551129e1 100644 --- a/derivatives/labels_softseg/sub-beijingPrisma01/anat/sub-beijingPrisma01_flip-1_mt-on_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-beijingPrisma01/anat/sub-beijingPrisma01_flip-1_mt-on_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:04" + "Date": "2022-10-22 14:36:04", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-beijingPrisma01/anat/sub-beijingPrisma01_flip-2_mt-off_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-beijingPrisma01/anat/sub-beijingPrisma01_flip-2_mt-off_space-other_MTS_label-SC_softseg.json index c0903d718d..b5551129e1 100644 --- a/derivatives/labels_softseg/sub-beijingPrisma01/anat/sub-beijingPrisma01_flip-2_mt-off_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-beijingPrisma01/anat/sub-beijingPrisma01_flip-2_mt-off_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:04" + "Date": "2022-10-22 14:36:04", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-beijingPrisma01/anat/sub-beijingPrisma01_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-beijingPrisma01/anat/sub-beijingPrisma01_space-other_T1w_label-SC_softseg.json index c0903d718d..7370fccd52 100644 --- a/derivatives/labels_softseg/sub-beijingPrisma01/anat/sub-beijingPrisma01_space-other_T1w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-beijingPrisma01/anat/sub-beijingPrisma01_space-other_T1w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:04" + "Date": "2022-10-22 14:36:04", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-beijingPrisma01/anat/sub-beijingPrisma01_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-beijingPrisma01/anat/sub-beijingPrisma01_space-other_T2star_label-SC_softseg.json index c0903d718d..078a8d963d 100644 --- a/derivatives/labels_softseg/sub-beijingPrisma01/anat/sub-beijingPrisma01_space-other_T2star_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-beijingPrisma01/anat/sub-beijingPrisma01_space-other_T2star_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:04" + "Date": "2022-10-22 14:36:04", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-beijingPrisma01/anat/sub-beijingPrisma01_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-beijingPrisma01/anat/sub-beijingPrisma01_space-other_T2w_label-SC_softseg.json index c0903d718d..c897218fac 100644 --- a/derivatives/labels_softseg/sub-beijingPrisma01/anat/sub-beijingPrisma01_space-other_T2w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-beijingPrisma01/anat/sub-beijingPrisma01_space-other_T2w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:04" + "Date": "2022-10-22 14:36:04", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-beijingPrisma02/anat/sub-beijingPrisma02_flip-1_mt-on_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-beijingPrisma02/anat/sub-beijingPrisma02_flip-1_mt-on_space-other_MTS_label-SC_softseg.json index c0903d718d..b5551129e1 100644 --- a/derivatives/labels_softseg/sub-beijingPrisma02/anat/sub-beijingPrisma02_flip-1_mt-on_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-beijingPrisma02/anat/sub-beijingPrisma02_flip-1_mt-on_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:04" + "Date": "2022-10-22 14:36:04", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-beijingPrisma02/anat/sub-beijingPrisma02_flip-2_mt-off_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-beijingPrisma02/anat/sub-beijingPrisma02_flip-2_mt-off_space-other_MTS_label-SC_softseg.json index c0903d718d..b5551129e1 100644 --- a/derivatives/labels_softseg/sub-beijingPrisma02/anat/sub-beijingPrisma02_flip-2_mt-off_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-beijingPrisma02/anat/sub-beijingPrisma02_flip-2_mt-off_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:04" + "Date": "2022-10-22 14:36:04", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-beijingPrisma02/anat/sub-beijingPrisma02_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-beijingPrisma02/anat/sub-beijingPrisma02_space-other_T1w_label-SC_softseg.json index c0903d718d..7370fccd52 100644 --- a/derivatives/labels_softseg/sub-beijingPrisma02/anat/sub-beijingPrisma02_space-other_T1w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-beijingPrisma02/anat/sub-beijingPrisma02_space-other_T1w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:04" + "Date": "2022-10-22 14:36:04", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-beijingPrisma02/anat/sub-beijingPrisma02_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-beijingPrisma02/anat/sub-beijingPrisma02_space-other_T2star_label-SC_softseg.json index c0903d718d..078a8d963d 100644 --- a/derivatives/labels_softseg/sub-beijingPrisma02/anat/sub-beijingPrisma02_space-other_T2star_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-beijingPrisma02/anat/sub-beijingPrisma02_space-other_T2star_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:04" + "Date": "2022-10-22 14:36:04", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-beijingPrisma02/anat/sub-beijingPrisma02_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-beijingPrisma02/anat/sub-beijingPrisma02_space-other_T2w_label-SC_softseg.json index c0903d718d..c897218fac 100644 --- a/derivatives/labels_softseg/sub-beijingPrisma02/anat/sub-beijingPrisma02_space-other_T2w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-beijingPrisma02/anat/sub-beijingPrisma02_space-other_T2w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:04" + "Date": "2022-10-22 14:36:04", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-beijingPrisma03/anat/sub-beijingPrisma03_flip-1_mt-on_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-beijingPrisma03/anat/sub-beijingPrisma03_flip-1_mt-on_space-other_MTS_label-SC_softseg.json index 6846b7f869..8998ed4c1e 100644 --- a/derivatives/labels_softseg/sub-beijingPrisma03/anat/sub-beijingPrisma03_flip-1_mt-on_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-beijingPrisma03/anat/sub-beijingPrisma03_flip-1_mt-on_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:05" + "Date": "2022-10-22 14:36:05", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-beijingPrisma03/anat/sub-beijingPrisma03_flip-2_mt-off_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-beijingPrisma03/anat/sub-beijingPrisma03_flip-2_mt-off_space-other_MTS_label-SC_softseg.json index 6846b7f869..8998ed4c1e 100644 --- a/derivatives/labels_softseg/sub-beijingPrisma03/anat/sub-beijingPrisma03_flip-2_mt-off_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-beijingPrisma03/anat/sub-beijingPrisma03_flip-2_mt-off_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:05" + "Date": "2022-10-22 14:36:05", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-beijingPrisma03/anat/sub-beijingPrisma03_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-beijingPrisma03/anat/sub-beijingPrisma03_space-other_T1w_label-SC_softseg.json index 6846b7f869..bf848061bb 100644 --- a/derivatives/labels_softseg/sub-beijingPrisma03/anat/sub-beijingPrisma03_space-other_T1w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-beijingPrisma03/anat/sub-beijingPrisma03_space-other_T1w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:05" + "Date": "2022-10-22 14:36:05", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-beijingPrisma03/anat/sub-beijingPrisma03_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-beijingPrisma03/anat/sub-beijingPrisma03_space-other_T2star_label-SC_softseg.json index 6846b7f869..e981c01895 100644 --- a/derivatives/labels_softseg/sub-beijingPrisma03/anat/sub-beijingPrisma03_space-other_T2star_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-beijingPrisma03/anat/sub-beijingPrisma03_space-other_T2star_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:05" + "Date": "2022-10-22 14:36:05", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-beijingPrisma03/anat/sub-beijingPrisma03_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-beijingPrisma03/anat/sub-beijingPrisma03_space-other_T2w_label-SC_softseg.json index 6846b7f869..06e3c334bc 100644 --- a/derivatives/labels_softseg/sub-beijingPrisma03/anat/sub-beijingPrisma03_space-other_T2w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-beijingPrisma03/anat/sub-beijingPrisma03_space-other_T2w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:05" + "Date": "2022-10-22 14:36:05", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-beijingPrisma04/anat/sub-beijingPrisma04_flip-1_mt-on_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-beijingPrisma04/anat/sub-beijingPrisma04_flip-1_mt-on_space-other_MTS_label-SC_softseg.json index 6846b7f869..8998ed4c1e 100644 --- a/derivatives/labels_softseg/sub-beijingPrisma04/anat/sub-beijingPrisma04_flip-1_mt-on_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-beijingPrisma04/anat/sub-beijingPrisma04_flip-1_mt-on_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:05" + "Date": "2022-10-22 14:36:05", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-beijingPrisma04/anat/sub-beijingPrisma04_flip-2_mt-off_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-beijingPrisma04/anat/sub-beijingPrisma04_flip-2_mt-off_space-other_MTS_label-SC_softseg.json index 6846b7f869..8998ed4c1e 100644 --- a/derivatives/labels_softseg/sub-beijingPrisma04/anat/sub-beijingPrisma04_flip-2_mt-off_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-beijingPrisma04/anat/sub-beijingPrisma04_flip-2_mt-off_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:05" + "Date": "2022-10-22 14:36:05", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-beijingPrisma04/anat/sub-beijingPrisma04_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-beijingPrisma04/anat/sub-beijingPrisma04_space-other_T1w_label-SC_softseg.json index 6846b7f869..bf848061bb 100644 --- a/derivatives/labels_softseg/sub-beijingPrisma04/anat/sub-beijingPrisma04_space-other_T1w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-beijingPrisma04/anat/sub-beijingPrisma04_space-other_T1w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:05" + "Date": "2022-10-22 14:36:05", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-beijingPrisma04/anat/sub-beijingPrisma04_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-beijingPrisma04/anat/sub-beijingPrisma04_space-other_T2star_label-SC_softseg.json index 6846b7f869..e981c01895 100644 --- a/derivatives/labels_softseg/sub-beijingPrisma04/anat/sub-beijingPrisma04_space-other_T2star_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-beijingPrisma04/anat/sub-beijingPrisma04_space-other_T2star_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:05" + "Date": "2022-10-22 14:36:05", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-beijingPrisma04/anat/sub-beijingPrisma04_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-beijingPrisma04/anat/sub-beijingPrisma04_space-other_T2w_label-SC_softseg.json index 6846b7f869..06e3c334bc 100644 --- a/derivatives/labels_softseg/sub-beijingPrisma04/anat/sub-beijingPrisma04_space-other_T2w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-beijingPrisma04/anat/sub-beijingPrisma04_space-other_T2w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:05" + "Date": "2022-10-22 14:36:05", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-beijingPrisma05/anat/sub-beijingPrisma05_flip-1_mt-on_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-beijingPrisma05/anat/sub-beijingPrisma05_flip-1_mt-on_space-other_MTS_label-SC_softseg.json index 6846b7f869..8998ed4c1e 100644 --- a/derivatives/labels_softseg/sub-beijingPrisma05/anat/sub-beijingPrisma05_flip-1_mt-on_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-beijingPrisma05/anat/sub-beijingPrisma05_flip-1_mt-on_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:05" + "Date": "2022-10-22 14:36:05", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-beijingPrisma05/anat/sub-beijingPrisma05_flip-2_mt-off_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-beijingPrisma05/anat/sub-beijingPrisma05_flip-2_mt-off_space-other_MTS_label-SC_softseg.json index 6846b7f869..8998ed4c1e 100644 --- a/derivatives/labels_softseg/sub-beijingPrisma05/anat/sub-beijingPrisma05_flip-2_mt-off_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-beijingPrisma05/anat/sub-beijingPrisma05_flip-2_mt-off_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:05" + "Date": "2022-10-22 14:36:05", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-beijingPrisma05/anat/sub-beijingPrisma05_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-beijingPrisma05/anat/sub-beijingPrisma05_space-other_T1w_label-SC_softseg.json index 6846b7f869..bf848061bb 100644 --- a/derivatives/labels_softseg/sub-beijingPrisma05/anat/sub-beijingPrisma05_space-other_T1w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-beijingPrisma05/anat/sub-beijingPrisma05_space-other_T1w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:05" + "Date": "2022-10-22 14:36:05", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-beijingPrisma05/anat/sub-beijingPrisma05_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-beijingPrisma05/anat/sub-beijingPrisma05_space-other_T2star_label-SC_softseg.json index 6846b7f869..e981c01895 100644 --- a/derivatives/labels_softseg/sub-beijingPrisma05/anat/sub-beijingPrisma05_space-other_T2star_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-beijingPrisma05/anat/sub-beijingPrisma05_space-other_T2star_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:05" + "Date": "2022-10-22 14:36:05", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-beijingPrisma05/anat/sub-beijingPrisma05_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-beijingPrisma05/anat/sub-beijingPrisma05_space-other_T2w_label-SC_softseg.json index 6846b7f869..06e3c334bc 100644 --- a/derivatives/labels_softseg/sub-beijingPrisma05/anat/sub-beijingPrisma05_space-other_T2w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-beijingPrisma05/anat/sub-beijingPrisma05_space-other_T2w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:05" + "Date": "2022-10-22 14:36:05", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-beijingVerio01/anat/sub-beijingVerio01_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-beijingVerio01/anat/sub-beijingVerio01_space-other_T1w_label-SC_softseg.json index 6846b7f869..bf848061bb 100644 --- a/derivatives/labels_softseg/sub-beijingVerio01/anat/sub-beijingVerio01_space-other_T1w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-beijingVerio01/anat/sub-beijingVerio01_space-other_T1w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:05" + "Date": "2022-10-22 14:36:05", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-beijingVerio01/anat/sub-beijingVerio01_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-beijingVerio01/anat/sub-beijingVerio01_space-other_T2star_label-SC_softseg.json index 6846b7f869..e981c01895 100644 --- a/derivatives/labels_softseg/sub-beijingVerio01/anat/sub-beijingVerio01_space-other_T2star_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-beijingVerio01/anat/sub-beijingVerio01_space-other_T2star_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:05" + "Date": "2022-10-22 14:36:05", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-beijingVerio01/anat/sub-beijingVerio01_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-beijingVerio01/anat/sub-beijingVerio01_space-other_T2w_label-SC_softseg.json index 6846b7f869..06e3c334bc 100644 --- a/derivatives/labels_softseg/sub-beijingVerio01/anat/sub-beijingVerio01_space-other_T2w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-beijingVerio01/anat/sub-beijingVerio01_space-other_T2w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:05" + "Date": "2022-10-22 14:36:05", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-beijingVerio02/anat/sub-beijingVerio02_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-beijingVerio02/anat/sub-beijingVerio02_space-other_T1w_label-SC_softseg.json index 85b3970175..8037df508c 100644 --- a/derivatives/labels_softseg/sub-beijingVerio02/anat/sub-beijingVerio02_space-other_T1w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-beijingVerio02/anat/sub-beijingVerio02_space-other_T1w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:06" + "Date": "2022-10-22 14:36:06", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-beijingVerio02/anat/sub-beijingVerio02_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-beijingVerio02/anat/sub-beijingVerio02_space-other_T2star_label-SC_softseg.json index 85b3970175..974bc14cf0 100644 --- a/derivatives/labels_softseg/sub-beijingVerio02/anat/sub-beijingVerio02_space-other_T2star_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-beijingVerio02/anat/sub-beijingVerio02_space-other_T2star_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:06" + "Date": "2022-10-22 14:36:06", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-beijingVerio02/anat/sub-beijingVerio02_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-beijingVerio02/anat/sub-beijingVerio02_space-other_T2w_label-SC_softseg.json index 85b3970175..ff69d4dbdb 100644 --- a/derivatives/labels_softseg/sub-beijingVerio02/anat/sub-beijingVerio02_space-other_T2w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-beijingVerio02/anat/sub-beijingVerio02_space-other_T2w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:06" + "Date": "2022-10-22 14:36:06", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-beijingVerio03/anat/sub-beijingVerio03_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-beijingVerio03/anat/sub-beijingVerio03_space-other_T1w_label-SC_softseg.json index 85b3970175..8037df508c 100644 --- a/derivatives/labels_softseg/sub-beijingVerio03/anat/sub-beijingVerio03_space-other_T1w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-beijingVerio03/anat/sub-beijingVerio03_space-other_T1w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:06" + "Date": "2022-10-22 14:36:06", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-beijingVerio03/anat/sub-beijingVerio03_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-beijingVerio03/anat/sub-beijingVerio03_space-other_T2star_label-SC_softseg.json index 85b3970175..974bc14cf0 100644 --- a/derivatives/labels_softseg/sub-beijingVerio03/anat/sub-beijingVerio03_space-other_T2star_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-beijingVerio03/anat/sub-beijingVerio03_space-other_T2star_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:06" + "Date": "2022-10-22 14:36:06", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-beijingVerio03/anat/sub-beijingVerio03_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-beijingVerio03/anat/sub-beijingVerio03_space-other_T2w_label-SC_softseg.json index 85b3970175..ff69d4dbdb 100644 --- a/derivatives/labels_softseg/sub-beijingVerio03/anat/sub-beijingVerio03_space-other_T2w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-beijingVerio03/anat/sub-beijingVerio03_space-other_T2w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:06" + "Date": "2022-10-22 14:36:06", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-beijingVerio04/anat/sub-beijingVerio04_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-beijingVerio04/anat/sub-beijingVerio04_space-other_T1w_label-SC_softseg.json index 85b3970175..8037df508c 100644 --- a/derivatives/labels_softseg/sub-beijingVerio04/anat/sub-beijingVerio04_space-other_T1w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-beijingVerio04/anat/sub-beijingVerio04_space-other_T1w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:06" + "Date": "2022-10-22 14:36:06", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-beijingVerio04/anat/sub-beijingVerio04_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-beijingVerio04/anat/sub-beijingVerio04_space-other_T2star_label-SC_softseg.json index 85b3970175..974bc14cf0 100644 --- a/derivatives/labels_softseg/sub-beijingVerio04/anat/sub-beijingVerio04_space-other_T2star_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-beijingVerio04/anat/sub-beijingVerio04_space-other_T2star_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:06" + "Date": "2022-10-22 14:36:06", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-beijingVerio04/anat/sub-beijingVerio04_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-beijingVerio04/anat/sub-beijingVerio04_space-other_T2w_label-SC_softseg.json index 85b3970175..ff69d4dbdb 100644 --- a/derivatives/labels_softseg/sub-beijingVerio04/anat/sub-beijingVerio04_space-other_T2w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-beijingVerio04/anat/sub-beijingVerio04_space-other_T2w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:06" + "Date": "2022-10-22 14:36:06", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-brnoCeitec01/anat/sub-brnoCeitec01_flip-1_mt-on_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-brnoCeitec01/anat/sub-brnoCeitec01_flip-1_mt-on_space-other_MTS_label-SC_softseg.json index 85b3970175..973b24b130 100644 --- a/derivatives/labels_softseg/sub-brnoCeitec01/anat/sub-brnoCeitec01_flip-1_mt-on_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-brnoCeitec01/anat/sub-brnoCeitec01_flip-1_mt-on_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:06" + "Date": "2022-10-22 14:36:06", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-brnoCeitec01/anat/sub-brnoCeitec01_flip-2_mt-off_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-brnoCeitec01/anat/sub-brnoCeitec01_flip-2_mt-off_space-other_MTS_label-SC_softseg.json index 85b3970175..973b24b130 100644 --- a/derivatives/labels_softseg/sub-brnoCeitec01/anat/sub-brnoCeitec01_flip-2_mt-off_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-brnoCeitec01/anat/sub-brnoCeitec01_flip-2_mt-off_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:06" + "Date": "2022-10-22 14:36:06", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-brnoCeitec01/anat/sub-brnoCeitec01_space-other_T1w.json b/derivatives/labels_softseg/sub-brnoCeitec01/anat/sub-brnoCeitec01_space-other_T1w.json index 07a7f11ba3..268a3bd9f3 100644 --- a/derivatives/labels_softseg/sub-brnoCeitec01/anat/sub-brnoCeitec01_space-other_T1w.json +++ b/derivatives/labels_softseg/sub-brnoCeitec01/anat/sub-brnoCeitec01_space-other_T1w.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2021-09-05 18:49:38" + "Date": "2021-09-05 18:49:38", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-brnoCeitec01/anat/sub-brnoCeitec01_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-brnoCeitec01/anat/sub-brnoCeitec01_space-other_T1w_label-SC_softseg.json index 85b3970175..8037df508c 100644 --- a/derivatives/labels_softseg/sub-brnoCeitec01/anat/sub-brnoCeitec01_space-other_T1w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-brnoCeitec01/anat/sub-brnoCeitec01_space-other_T1w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:06" + "Date": "2022-10-22 14:36:06", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-brnoCeitec01/anat/sub-brnoCeitec01_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-brnoCeitec01/anat/sub-brnoCeitec01_space-other_T2star_label-SC_softseg.json index 85b3970175..974bc14cf0 100644 --- a/derivatives/labels_softseg/sub-brnoCeitec01/anat/sub-brnoCeitec01_space-other_T2star_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-brnoCeitec01/anat/sub-brnoCeitec01_space-other_T2star_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:06" + "Date": "2022-10-22 14:36:06", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-brnoCeitec01/anat/sub-brnoCeitec01_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-brnoCeitec01/anat/sub-brnoCeitec01_space-other_T2w_label-SC_softseg.json index 85b3970175..ff69d4dbdb 100644 --- a/derivatives/labels_softseg/sub-brnoCeitec01/anat/sub-brnoCeitec01_space-other_T2w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-brnoCeitec01/anat/sub-brnoCeitec01_space-other_T2w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:06" + "Date": "2022-10-22 14:36:06", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-brnoCeitec02/anat/sub-brnoCeitec02_flip-1_mt-on_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-brnoCeitec02/anat/sub-brnoCeitec02_flip-1_mt-on_space-other_MTS_label-SC_softseg.json index 85b3970175..973b24b130 100644 --- a/derivatives/labels_softseg/sub-brnoCeitec02/anat/sub-brnoCeitec02_flip-1_mt-on_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-brnoCeitec02/anat/sub-brnoCeitec02_flip-1_mt-on_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:06" + "Date": "2022-10-22 14:36:06", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-brnoCeitec02/anat/sub-brnoCeitec02_flip-2_mt-off_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-brnoCeitec02/anat/sub-brnoCeitec02_flip-2_mt-off_space-other_MTS_label-SC_softseg.json index 85b3970175..973b24b130 100644 --- a/derivatives/labels_softseg/sub-brnoCeitec02/anat/sub-brnoCeitec02_flip-2_mt-off_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-brnoCeitec02/anat/sub-brnoCeitec02_flip-2_mt-off_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:06" + "Date": "2022-10-22 14:36:06", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-brnoCeitec02/anat/sub-brnoCeitec02_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-brnoCeitec02/anat/sub-brnoCeitec02_space-other_T1w_label-SC_softseg.json index 85b3970175..8037df508c 100644 --- a/derivatives/labels_softseg/sub-brnoCeitec02/anat/sub-brnoCeitec02_space-other_T1w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-brnoCeitec02/anat/sub-brnoCeitec02_space-other_T1w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:06" + "Date": "2022-10-22 14:36:06", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-brnoCeitec02/anat/sub-brnoCeitec02_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-brnoCeitec02/anat/sub-brnoCeitec02_space-other_T2star_label-SC_softseg.json index a4c5e74415..41e7b8872b 100644 --- a/derivatives/labels_softseg/sub-brnoCeitec02/anat/sub-brnoCeitec02_space-other_T2star_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-brnoCeitec02/anat/sub-brnoCeitec02_space-other_T2star_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:07" + "Date": "2022-10-22 14:36:07", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-brnoCeitec02/anat/sub-brnoCeitec02_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-brnoCeitec02/anat/sub-brnoCeitec02_space-other_T2w_label-SC_softseg.json index a4c5e74415..5e1cc398f7 100644 --- a/derivatives/labels_softseg/sub-brnoCeitec02/anat/sub-brnoCeitec02_space-other_T2w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-brnoCeitec02/anat/sub-brnoCeitec02_space-other_T2w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:07" + "Date": "2022-10-22 14:36:07", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-brnoCeitec03/anat/sub-brnoCeitec03_flip-1_mt-on_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-brnoCeitec03/anat/sub-brnoCeitec03_flip-1_mt-on_space-other_MTS_label-SC_softseg.json index a4c5e74415..babe752231 100644 --- a/derivatives/labels_softseg/sub-brnoCeitec03/anat/sub-brnoCeitec03_flip-1_mt-on_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-brnoCeitec03/anat/sub-brnoCeitec03_flip-1_mt-on_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:07" + "Date": "2022-10-22 14:36:07", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-brnoCeitec03/anat/sub-brnoCeitec03_flip-2_mt-off_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-brnoCeitec03/anat/sub-brnoCeitec03_flip-2_mt-off_space-other_MTS_label-SC_softseg.json index a4c5e74415..babe752231 100644 --- a/derivatives/labels_softseg/sub-brnoCeitec03/anat/sub-brnoCeitec03_flip-2_mt-off_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-brnoCeitec03/anat/sub-brnoCeitec03_flip-2_mt-off_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:07" + "Date": "2022-10-22 14:36:07", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-brnoCeitec03/anat/sub-brnoCeitec03_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-brnoCeitec03/anat/sub-brnoCeitec03_space-other_T1w_label-SC_softseg.json index a4c5e74415..0ecd094409 100644 --- a/derivatives/labels_softseg/sub-brnoCeitec03/anat/sub-brnoCeitec03_space-other_T1w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-brnoCeitec03/anat/sub-brnoCeitec03_space-other_T1w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:07" + "Date": "2022-10-22 14:36:07", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-brnoCeitec03/anat/sub-brnoCeitec03_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-brnoCeitec03/anat/sub-brnoCeitec03_space-other_T2star_label-SC_softseg.json index a4c5e74415..41e7b8872b 100644 --- a/derivatives/labels_softseg/sub-brnoCeitec03/anat/sub-brnoCeitec03_space-other_T2star_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-brnoCeitec03/anat/sub-brnoCeitec03_space-other_T2star_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:07" + "Date": "2022-10-22 14:36:07", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-brnoCeitec03/anat/sub-brnoCeitec03_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-brnoCeitec03/anat/sub-brnoCeitec03_space-other_T2w_label-SC_softseg.json index a4c5e74415..5e1cc398f7 100644 --- a/derivatives/labels_softseg/sub-brnoCeitec03/anat/sub-brnoCeitec03_space-other_T2w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-brnoCeitec03/anat/sub-brnoCeitec03_space-other_T2w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:07" + "Date": "2022-10-22 14:36:07", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-brnoCeitec04/anat/sub-brnoCeitec04_flip-1_mt-on_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-brnoCeitec04/anat/sub-brnoCeitec04_flip-1_mt-on_space-other_MTS_label-SC_softseg.json index a4c5e74415..babe752231 100644 --- a/derivatives/labels_softseg/sub-brnoCeitec04/anat/sub-brnoCeitec04_flip-1_mt-on_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-brnoCeitec04/anat/sub-brnoCeitec04_flip-1_mt-on_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:07" + "Date": "2022-10-22 14:36:07", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-brnoCeitec04/anat/sub-brnoCeitec04_flip-2_mt-off_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-brnoCeitec04/anat/sub-brnoCeitec04_flip-2_mt-off_space-other_MTS_label-SC_softseg.json index a4c5e74415..babe752231 100644 --- a/derivatives/labels_softseg/sub-brnoCeitec04/anat/sub-brnoCeitec04_flip-2_mt-off_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-brnoCeitec04/anat/sub-brnoCeitec04_flip-2_mt-off_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:07" + "Date": "2022-10-22 14:36:07", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-brnoCeitec04/anat/sub-brnoCeitec04_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-brnoCeitec04/anat/sub-brnoCeitec04_space-other_T1w_label-SC_softseg.json index a4c5e74415..0ecd094409 100644 --- a/derivatives/labels_softseg/sub-brnoCeitec04/anat/sub-brnoCeitec04_space-other_T1w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-brnoCeitec04/anat/sub-brnoCeitec04_space-other_T1w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:07" + "Date": "2022-10-22 14:36:07", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-brnoCeitec04/anat/sub-brnoCeitec04_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-brnoCeitec04/anat/sub-brnoCeitec04_space-other_T2star_label-SC_softseg.json index a4c5e74415..41e7b8872b 100644 --- a/derivatives/labels_softseg/sub-brnoCeitec04/anat/sub-brnoCeitec04_space-other_T2star_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-brnoCeitec04/anat/sub-brnoCeitec04_space-other_T2star_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:07" + "Date": "2022-10-22 14:36:07", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-brnoCeitec04/anat/sub-brnoCeitec04_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-brnoCeitec04/anat/sub-brnoCeitec04_space-other_T2w_label-SC_softseg.json index a4c5e74415..5e1cc398f7 100644 --- a/derivatives/labels_softseg/sub-brnoCeitec04/anat/sub-brnoCeitec04_space-other_T2w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-brnoCeitec04/anat/sub-brnoCeitec04_space-other_T2w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:07" + "Date": "2022-10-22 14:36:07", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-brnoCeitec05/anat/sub-brnoCeitec05_flip-1_mt-on_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-brnoCeitec05/anat/sub-brnoCeitec05_flip-1_mt-on_space-other_MTS_label-SC_softseg.json index a4c5e74415..babe752231 100644 --- a/derivatives/labels_softseg/sub-brnoCeitec05/anat/sub-brnoCeitec05_flip-1_mt-on_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-brnoCeitec05/anat/sub-brnoCeitec05_flip-1_mt-on_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:07" + "Date": "2022-10-22 14:36:07", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-brnoCeitec05/anat/sub-brnoCeitec05_flip-2_mt-off_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-brnoCeitec05/anat/sub-brnoCeitec05_flip-2_mt-off_space-other_MTS_label-SC_softseg.json index a4c5e74415..babe752231 100644 --- a/derivatives/labels_softseg/sub-brnoCeitec05/anat/sub-brnoCeitec05_flip-2_mt-off_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-brnoCeitec05/anat/sub-brnoCeitec05_flip-2_mt-off_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:07" + "Date": "2022-10-22 14:36:07", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-brnoCeitec05/anat/sub-brnoCeitec05_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-brnoCeitec05/anat/sub-brnoCeitec05_space-other_T1w_label-SC_softseg.json index a4c5e74415..0ecd094409 100644 --- a/derivatives/labels_softseg/sub-brnoCeitec05/anat/sub-brnoCeitec05_space-other_T1w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-brnoCeitec05/anat/sub-brnoCeitec05_space-other_T1w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:07" + "Date": "2022-10-22 14:36:07", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-brnoCeitec05/anat/sub-brnoCeitec05_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-brnoCeitec05/anat/sub-brnoCeitec05_space-other_T2star_label-SC_softseg.json index a4c5e74415..41e7b8872b 100644 --- a/derivatives/labels_softseg/sub-brnoCeitec05/anat/sub-brnoCeitec05_space-other_T2star_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-brnoCeitec05/anat/sub-brnoCeitec05_space-other_T2star_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:07" + "Date": "2022-10-22 14:36:07", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-brnoCeitec05/anat/sub-brnoCeitec05_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-brnoCeitec05/anat/sub-brnoCeitec05_space-other_T2w_label-SC_softseg.json index a4c5e74415..5e1cc398f7 100644 --- a/derivatives/labels_softseg/sub-brnoCeitec05/anat/sub-brnoCeitec05_space-other_T2w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-brnoCeitec05/anat/sub-brnoCeitec05_space-other_T2w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:07" + "Date": "2022-10-22 14:36:07", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-brnoCeitec06/anat/sub-brnoCeitec06_flip-1_mt-on_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-brnoCeitec06/anat/sub-brnoCeitec06_flip-1_mt-on_space-other_MTS_label-SC_softseg.json index b8b40fdd0c..f2d35692cf 100644 --- a/derivatives/labels_softseg/sub-brnoCeitec06/anat/sub-brnoCeitec06_flip-1_mt-on_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-brnoCeitec06/anat/sub-brnoCeitec06_flip-1_mt-on_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:08" + "Date": "2022-10-22 14:36:08", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-brnoCeitec06/anat/sub-brnoCeitec06_flip-2_mt-off_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-brnoCeitec06/anat/sub-brnoCeitec06_flip-2_mt-off_space-other_MTS_label-SC_softseg.json index b8b40fdd0c..f2d35692cf 100644 --- a/derivatives/labels_softseg/sub-brnoCeitec06/anat/sub-brnoCeitec06_flip-2_mt-off_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-brnoCeitec06/anat/sub-brnoCeitec06_flip-2_mt-off_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:08" + "Date": "2022-10-22 14:36:08", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-brnoCeitec06/anat/sub-brnoCeitec06_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-brnoCeitec06/anat/sub-brnoCeitec06_space-other_T1w_label-SC_softseg.json index b8b40fdd0c..1c03d83de9 100644 --- a/derivatives/labels_softseg/sub-brnoCeitec06/anat/sub-brnoCeitec06_space-other_T1w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-brnoCeitec06/anat/sub-brnoCeitec06_space-other_T1w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:08" + "Date": "2022-10-22 14:36:08", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-brnoCeitec06/anat/sub-brnoCeitec06_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-brnoCeitec06/anat/sub-brnoCeitec06_space-other_T2star_label-SC_softseg.json index b8b40fdd0c..14365307fc 100644 --- a/derivatives/labels_softseg/sub-brnoCeitec06/anat/sub-brnoCeitec06_space-other_T2star_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-brnoCeitec06/anat/sub-brnoCeitec06_space-other_T2star_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:08" + "Date": "2022-10-22 14:36:08", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-brnoCeitec06/anat/sub-brnoCeitec06_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-brnoCeitec06/anat/sub-brnoCeitec06_space-other_T2w_label-SC_softseg.json index b8b40fdd0c..d1552c2ab7 100644 --- a/derivatives/labels_softseg/sub-brnoCeitec06/anat/sub-brnoCeitec06_space-other_T2w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-brnoCeitec06/anat/sub-brnoCeitec06_space-other_T2w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:08" + "Date": "2022-10-22 14:36:08", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-brnoUhb01/anat/sub-brnoUhb01_flip-1_mt-on_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-brnoUhb01/anat/sub-brnoUhb01_flip-1_mt-on_space-other_MTS_label-SC_softseg.json index b8b40fdd0c..f2d35692cf 100644 --- a/derivatives/labels_softseg/sub-brnoUhb01/anat/sub-brnoUhb01_flip-1_mt-on_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-brnoUhb01/anat/sub-brnoUhb01_flip-1_mt-on_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:08" + "Date": "2022-10-22 14:36:08", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-brnoUhb01/anat/sub-brnoUhb01_flip-2_mt-off_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-brnoUhb01/anat/sub-brnoUhb01_flip-2_mt-off_space-other_MTS_label-SC_softseg.json index b8b40fdd0c..f2d35692cf 100644 --- a/derivatives/labels_softseg/sub-brnoUhb01/anat/sub-brnoUhb01_flip-2_mt-off_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-brnoUhb01/anat/sub-brnoUhb01_flip-2_mt-off_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:08" + "Date": "2022-10-22 14:36:08", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-brnoUhb01/anat/sub-brnoUhb01_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-brnoUhb01/anat/sub-brnoUhb01_space-other_T1w_label-SC_softseg.json index b8b40fdd0c..1c03d83de9 100644 --- a/derivatives/labels_softseg/sub-brnoUhb01/anat/sub-brnoUhb01_space-other_T1w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-brnoUhb01/anat/sub-brnoUhb01_space-other_T1w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:08" + "Date": "2022-10-22 14:36:08", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-brnoUhb01/anat/sub-brnoUhb01_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-brnoUhb01/anat/sub-brnoUhb01_space-other_T2star_label-SC_softseg.json index b8b40fdd0c..14365307fc 100644 --- a/derivatives/labels_softseg/sub-brnoUhb01/anat/sub-brnoUhb01_space-other_T2star_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-brnoUhb01/anat/sub-brnoUhb01_space-other_T2star_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:08" + "Date": "2022-10-22 14:36:08", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-brnoUhb01/anat/sub-brnoUhb01_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-brnoUhb01/anat/sub-brnoUhb01_space-other_T2w_label-SC_softseg.json index b8b40fdd0c..d1552c2ab7 100644 --- a/derivatives/labels_softseg/sub-brnoUhb01/anat/sub-brnoUhb01_space-other_T2w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-brnoUhb01/anat/sub-brnoUhb01_space-other_T2w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:08" + "Date": "2022-10-22 14:36:08", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-brnoUhb04/anat/sub-brnoUhb04_flip-1_mt-on_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-brnoUhb04/anat/sub-brnoUhb04_flip-1_mt-on_space-other_MTS_label-SC_softseg.json index eaac26b8cd..6010e223f5 100644 --- a/derivatives/labels_softseg/sub-brnoUhb04/anat/sub-brnoUhb04_flip-1_mt-on_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-brnoUhb04/anat/sub-brnoUhb04_flip-1_mt-on_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:09" + "Date": "2022-10-22 14:36:09", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-brnoUhb04/anat/sub-brnoUhb04_flip-2_mt-off_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-brnoUhb04/anat/sub-brnoUhb04_flip-2_mt-off_space-other_MTS_label-SC_softseg.json index eaac26b8cd..6010e223f5 100644 --- a/derivatives/labels_softseg/sub-brnoUhb04/anat/sub-brnoUhb04_flip-2_mt-off_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-brnoUhb04/anat/sub-brnoUhb04_flip-2_mt-off_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:09" + "Date": "2022-10-22 14:36:09", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-brnoUhb04/anat/sub-brnoUhb04_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-brnoUhb04/anat/sub-brnoUhb04_space-other_T1w_label-SC_softseg.json index eaac26b8cd..738b9da33d 100644 --- a/derivatives/labels_softseg/sub-brnoUhb04/anat/sub-brnoUhb04_space-other_T1w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-brnoUhb04/anat/sub-brnoUhb04_space-other_T1w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:09" + "Date": "2022-10-22 14:36:09", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-brnoUhb04/anat/sub-brnoUhb04_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-brnoUhb04/anat/sub-brnoUhb04_space-other_T2star_label-SC_softseg.json index eaac26b8cd..bd1a366351 100644 --- a/derivatives/labels_softseg/sub-brnoUhb04/anat/sub-brnoUhb04_space-other_T2star_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-brnoUhb04/anat/sub-brnoUhb04_space-other_T2star_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:09" + "Date": "2022-10-22 14:36:09", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-brnoUhb04/anat/sub-brnoUhb04_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-brnoUhb04/anat/sub-brnoUhb04_space-other_T2w_label-SC_softseg.json index eaac26b8cd..3683b013c0 100644 --- a/derivatives/labels_softseg/sub-brnoUhb04/anat/sub-brnoUhb04_space-other_T2w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-brnoUhb04/anat/sub-brnoUhb04_space-other_T2w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:09" + "Date": "2022-10-22 14:36:09", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-brnoUhb05/anat/sub-brnoUhb05_flip-1_mt-on_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-brnoUhb05/anat/sub-brnoUhb05_flip-1_mt-on_space-other_MTS_label-SC_softseg.json index eaac26b8cd..6010e223f5 100644 --- a/derivatives/labels_softseg/sub-brnoUhb05/anat/sub-brnoUhb05_flip-1_mt-on_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-brnoUhb05/anat/sub-brnoUhb05_flip-1_mt-on_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:09" + "Date": "2022-10-22 14:36:09", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-brnoUhb05/anat/sub-brnoUhb05_flip-2_mt-off_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-brnoUhb05/anat/sub-brnoUhb05_flip-2_mt-off_space-other_MTS_label-SC_softseg.json index eaac26b8cd..6010e223f5 100644 --- a/derivatives/labels_softseg/sub-brnoUhb05/anat/sub-brnoUhb05_flip-2_mt-off_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-brnoUhb05/anat/sub-brnoUhb05_flip-2_mt-off_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:09" + "Date": "2022-10-22 14:36:09", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-brnoUhb05/anat/sub-brnoUhb05_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-brnoUhb05/anat/sub-brnoUhb05_space-other_T1w_label-SC_softseg.json index eaac26b8cd..738b9da33d 100644 --- a/derivatives/labels_softseg/sub-brnoUhb05/anat/sub-brnoUhb05_space-other_T1w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-brnoUhb05/anat/sub-brnoUhb05_space-other_T1w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:09" + "Date": "2022-10-22 14:36:09", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-brnoUhb05/anat/sub-brnoUhb05_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-brnoUhb05/anat/sub-brnoUhb05_space-other_T2star_label-SC_softseg.json index eaac26b8cd..bd1a366351 100644 --- a/derivatives/labels_softseg/sub-brnoUhb05/anat/sub-brnoUhb05_space-other_T2star_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-brnoUhb05/anat/sub-brnoUhb05_space-other_T2star_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:09" + "Date": "2022-10-22 14:36:09", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-brnoUhb05/anat/sub-brnoUhb05_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-brnoUhb05/anat/sub-brnoUhb05_space-other_T2w_label-SC_softseg.json index eaac26b8cd..3683b013c0 100644 --- a/derivatives/labels_softseg/sub-brnoUhb05/anat/sub-brnoUhb05_space-other_T2w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-brnoUhb05/anat/sub-brnoUhb05_space-other_T2w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:09" + "Date": "2022-10-22 14:36:09", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-brnoUhb06/anat/sub-brnoUhb06_flip-1_mt-on_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-brnoUhb06/anat/sub-brnoUhb06_flip-1_mt-on_space-other_MTS_label-SC_softseg.json index eaac26b8cd..6010e223f5 100644 --- a/derivatives/labels_softseg/sub-brnoUhb06/anat/sub-brnoUhb06_flip-1_mt-on_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-brnoUhb06/anat/sub-brnoUhb06_flip-1_mt-on_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:09" + "Date": "2022-10-22 14:36:09", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-brnoUhb06/anat/sub-brnoUhb06_flip-2_mt-off_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-brnoUhb06/anat/sub-brnoUhb06_flip-2_mt-off_space-other_MTS_label-SC_softseg.json index eaac26b8cd..6010e223f5 100644 --- a/derivatives/labels_softseg/sub-brnoUhb06/anat/sub-brnoUhb06_flip-2_mt-off_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-brnoUhb06/anat/sub-brnoUhb06_flip-2_mt-off_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:09" + "Date": "2022-10-22 14:36:09", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-brnoUhb06/anat/sub-brnoUhb06_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-brnoUhb06/anat/sub-brnoUhb06_space-other_T1w_label-SC_softseg.json index eaac26b8cd..738b9da33d 100644 --- a/derivatives/labels_softseg/sub-brnoUhb06/anat/sub-brnoUhb06_space-other_T1w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-brnoUhb06/anat/sub-brnoUhb06_space-other_T1w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:09" + "Date": "2022-10-22 14:36:09", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-brnoUhb06/anat/sub-brnoUhb06_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-brnoUhb06/anat/sub-brnoUhb06_space-other_T2star_label-SC_softseg.json index eaac26b8cd..bd1a366351 100644 --- a/derivatives/labels_softseg/sub-brnoUhb06/anat/sub-brnoUhb06_space-other_T2star_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-brnoUhb06/anat/sub-brnoUhb06_space-other_T2star_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:09" + "Date": "2022-10-22 14:36:09", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-brnoUhb06/anat/sub-brnoUhb06_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-brnoUhb06/anat/sub-brnoUhb06_space-other_T2w_label-SC_softseg.json index eaac26b8cd..3683b013c0 100644 --- a/derivatives/labels_softseg/sub-brnoUhb06/anat/sub-brnoUhb06_space-other_T2w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-brnoUhb06/anat/sub-brnoUhb06_space-other_T2w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:09" + "Date": "2022-10-22 14:36:09", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-cardiff01/anat/sub-cardiff01_flip-1_mt-on_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-cardiff01/anat/sub-cardiff01_flip-1_mt-on_space-other_MTS_label-SC_softseg.json index 5c91cc4892..360e874a79 100644 --- a/derivatives/labels_softseg/sub-cardiff01/anat/sub-cardiff01_flip-1_mt-on_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-cardiff01/anat/sub-cardiff01_flip-1_mt-on_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:10" + "Date": "2022-10-22 14:36:10", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-cardiff01/anat/sub-cardiff01_flip-2_mt-off_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-cardiff01/anat/sub-cardiff01_flip-2_mt-off_space-other_MTS_label-SC_softseg.json index 5c91cc4892..360e874a79 100644 --- a/derivatives/labels_softseg/sub-cardiff01/anat/sub-cardiff01_flip-2_mt-off_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-cardiff01/anat/sub-cardiff01_flip-2_mt-off_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:10" + "Date": "2022-10-22 14:36:10", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-cardiff01/anat/sub-cardiff01_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-cardiff01/anat/sub-cardiff01_space-other_T1w_label-SC_softseg.json index 5c91cc4892..edfcc4321f 100644 --- a/derivatives/labels_softseg/sub-cardiff01/anat/sub-cardiff01_space-other_T1w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-cardiff01/anat/sub-cardiff01_space-other_T1w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:10" + "Date": "2022-10-22 14:36:10", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-cardiff01/anat/sub-cardiff01_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-cardiff01/anat/sub-cardiff01_space-other_T2star_label-SC_softseg.json index 5c91cc4892..b406aa8f4c 100644 --- a/derivatives/labels_softseg/sub-cardiff01/anat/sub-cardiff01_space-other_T2star_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-cardiff01/anat/sub-cardiff01_space-other_T2star_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:10" + "Date": "2022-10-22 14:36:10", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-cardiff01/anat/sub-cardiff01_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-cardiff01/anat/sub-cardiff01_space-other_T2w_label-SC_softseg.json index 5c91cc4892..b3cadb6670 100644 --- a/derivatives/labels_softseg/sub-cardiff01/anat/sub-cardiff01_space-other_T2w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-cardiff01/anat/sub-cardiff01_space-other_T2w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:10" + "Date": "2022-10-22 14:36:10", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-cardiff02/anat/sub-cardiff02_flip-1_mt-on_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-cardiff02/anat/sub-cardiff02_flip-1_mt-on_space-other_MTS_label-SC_softseg.json index 5c91cc4892..360e874a79 100644 --- a/derivatives/labels_softseg/sub-cardiff02/anat/sub-cardiff02_flip-1_mt-on_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-cardiff02/anat/sub-cardiff02_flip-1_mt-on_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:10" + "Date": "2022-10-22 14:36:10", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-cardiff02/anat/sub-cardiff02_flip-2_mt-off_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-cardiff02/anat/sub-cardiff02_flip-2_mt-off_space-other_MTS_label-SC_softseg.json index 5c91cc4892..360e874a79 100644 --- a/derivatives/labels_softseg/sub-cardiff02/anat/sub-cardiff02_flip-2_mt-off_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-cardiff02/anat/sub-cardiff02_flip-2_mt-off_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:10" + "Date": "2022-10-22 14:36:10", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-cardiff02/anat/sub-cardiff02_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-cardiff02/anat/sub-cardiff02_space-other_T1w_label-SC_softseg.json index 5c91cc4892..edfcc4321f 100644 --- a/derivatives/labels_softseg/sub-cardiff02/anat/sub-cardiff02_space-other_T1w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-cardiff02/anat/sub-cardiff02_space-other_T1w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:10" + "Date": "2022-10-22 14:36:10", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-cardiff02/anat/sub-cardiff02_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-cardiff02/anat/sub-cardiff02_space-other_T2star_label-SC_softseg.json index 5c91cc4892..b406aa8f4c 100644 --- a/derivatives/labels_softseg/sub-cardiff02/anat/sub-cardiff02_space-other_T2star_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-cardiff02/anat/sub-cardiff02_space-other_T2star_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:10" + "Date": "2022-10-22 14:36:10", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-cardiff02/anat/sub-cardiff02_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-cardiff02/anat/sub-cardiff02_space-other_T2w_label-SC_softseg.json index 5c91cc4892..b3cadb6670 100644 --- a/derivatives/labels_softseg/sub-cardiff02/anat/sub-cardiff02_space-other_T2w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-cardiff02/anat/sub-cardiff02_space-other_T2w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:10" + "Date": "2022-10-22 14:36:10", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-cardiff03/anat/sub-cardiff03_flip-1_mt-on_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-cardiff03/anat/sub-cardiff03_flip-1_mt-on_space-other_MTS_label-SC_softseg.json index 5c91cc4892..360e874a79 100644 --- a/derivatives/labels_softseg/sub-cardiff03/anat/sub-cardiff03_flip-1_mt-on_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-cardiff03/anat/sub-cardiff03_flip-1_mt-on_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:10" + "Date": "2022-10-22 14:36:10", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-cardiff03/anat/sub-cardiff03_flip-2_mt-off_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-cardiff03/anat/sub-cardiff03_flip-2_mt-off_space-other_MTS_label-SC_softseg.json index 1bcf4e0cb1..2bb7485300 100644 --- a/derivatives/labels_softseg/sub-cardiff03/anat/sub-cardiff03_flip-2_mt-off_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-cardiff03/anat/sub-cardiff03_flip-2_mt-off_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:11" + "Date": "2022-10-22 14:36:11", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-cardiff03/anat/sub-cardiff03_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-cardiff03/anat/sub-cardiff03_space-other_T1w_label-SC_softseg.json index 1bcf4e0cb1..9a4c72837c 100644 --- a/derivatives/labels_softseg/sub-cardiff03/anat/sub-cardiff03_space-other_T1w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-cardiff03/anat/sub-cardiff03_space-other_T1w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:11" + "Date": "2022-10-22 14:36:11", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-cardiff03/anat/sub-cardiff03_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-cardiff03/anat/sub-cardiff03_space-other_T2star_label-SC_softseg.json index 1bcf4e0cb1..8512a4d479 100644 --- a/derivatives/labels_softseg/sub-cardiff03/anat/sub-cardiff03_space-other_T2star_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-cardiff03/anat/sub-cardiff03_space-other_T2star_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:11" + "Date": "2022-10-22 14:36:11", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-cardiff03/anat/sub-cardiff03_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-cardiff03/anat/sub-cardiff03_space-other_T2w_label-SC_softseg.json index 1bcf4e0cb1..861a1d1770 100644 --- a/derivatives/labels_softseg/sub-cardiff03/anat/sub-cardiff03_space-other_T2w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-cardiff03/anat/sub-cardiff03_space-other_T2w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:11" + "Date": "2022-10-22 14:36:11", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-cardiff04/anat/sub-cardiff04_flip-1_mt-on_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-cardiff04/anat/sub-cardiff04_flip-1_mt-on_space-other_MTS_label-SC_softseg.json index 1bcf4e0cb1..2bb7485300 100644 --- a/derivatives/labels_softseg/sub-cardiff04/anat/sub-cardiff04_flip-1_mt-on_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-cardiff04/anat/sub-cardiff04_flip-1_mt-on_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:11" + "Date": "2022-10-22 14:36:11", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-cardiff04/anat/sub-cardiff04_flip-2_mt-off_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-cardiff04/anat/sub-cardiff04_flip-2_mt-off_space-other_MTS_label-SC_softseg.json index 1bcf4e0cb1..2bb7485300 100644 --- a/derivatives/labels_softseg/sub-cardiff04/anat/sub-cardiff04_flip-2_mt-off_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-cardiff04/anat/sub-cardiff04_flip-2_mt-off_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:11" + "Date": "2022-10-22 14:36:11", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-cardiff04/anat/sub-cardiff04_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-cardiff04/anat/sub-cardiff04_space-other_T1w_label-SC_softseg.json index 1bcf4e0cb1..9a4c72837c 100644 --- a/derivatives/labels_softseg/sub-cardiff04/anat/sub-cardiff04_space-other_T1w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-cardiff04/anat/sub-cardiff04_space-other_T1w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:11" + "Date": "2022-10-22 14:36:11", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-cardiff04/anat/sub-cardiff04_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-cardiff04/anat/sub-cardiff04_space-other_T2star_label-SC_softseg.json index 1bcf4e0cb1..8512a4d479 100644 --- a/derivatives/labels_softseg/sub-cardiff04/anat/sub-cardiff04_space-other_T2star_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-cardiff04/anat/sub-cardiff04_space-other_T2star_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:11" + "Date": "2022-10-22 14:36:11", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-cardiff04/anat/sub-cardiff04_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-cardiff04/anat/sub-cardiff04_space-other_T2w_label-SC_softseg.json index 1bcf4e0cb1..861a1d1770 100644 --- a/derivatives/labels_softseg/sub-cardiff04/anat/sub-cardiff04_space-other_T2w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-cardiff04/anat/sub-cardiff04_space-other_T2w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:11" + "Date": "2022-10-22 14:36:11", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-cardiff05/anat/sub-cardiff05_flip-1_mt-on_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-cardiff05/anat/sub-cardiff05_flip-1_mt-on_space-other_MTS_label-SC_softseg.json index 1bcf4e0cb1..2bb7485300 100644 --- a/derivatives/labels_softseg/sub-cardiff05/anat/sub-cardiff05_flip-1_mt-on_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-cardiff05/anat/sub-cardiff05_flip-1_mt-on_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:11" + "Date": "2022-10-22 14:36:11", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-cardiff05/anat/sub-cardiff05_flip-2_mt-off_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-cardiff05/anat/sub-cardiff05_flip-2_mt-off_space-other_MTS_label-SC_softseg.json index 1bcf4e0cb1..2bb7485300 100644 --- a/derivatives/labels_softseg/sub-cardiff05/anat/sub-cardiff05_flip-2_mt-off_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-cardiff05/anat/sub-cardiff05_flip-2_mt-off_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:11" + "Date": "2022-10-22 14:36:11", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-cardiff05/anat/sub-cardiff05_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-cardiff05/anat/sub-cardiff05_space-other_T1w_label-SC_softseg.json index 1bcf4e0cb1..9a4c72837c 100644 --- a/derivatives/labels_softseg/sub-cardiff05/anat/sub-cardiff05_space-other_T1w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-cardiff05/anat/sub-cardiff05_space-other_T1w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:11" + "Date": "2022-10-22 14:36:11", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-cardiff05/anat/sub-cardiff05_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-cardiff05/anat/sub-cardiff05_space-other_T2star_label-SC_softseg.json index 1bcf4e0cb1..8512a4d479 100644 --- a/derivatives/labels_softseg/sub-cardiff05/anat/sub-cardiff05_space-other_T2star_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-cardiff05/anat/sub-cardiff05_space-other_T2star_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:11" + "Date": "2022-10-22 14:36:11", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-cardiff05/anat/sub-cardiff05_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-cardiff05/anat/sub-cardiff05_space-other_T2w_label-SC_softseg.json index 1bcf4e0cb1..861a1d1770 100644 --- a/derivatives/labels_softseg/sub-cardiff05/anat/sub-cardiff05_space-other_T2w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-cardiff05/anat/sub-cardiff05_space-other_T2w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:11" + "Date": "2022-10-22 14:36:11", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-cardiff06/anat/sub-cardiff06_flip-1_mt-on_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-cardiff06/anat/sub-cardiff06_flip-1_mt-on_space-other_MTS_label-SC_softseg.json index 1bcf4e0cb1..2bb7485300 100644 --- a/derivatives/labels_softseg/sub-cardiff06/anat/sub-cardiff06_flip-1_mt-on_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-cardiff06/anat/sub-cardiff06_flip-1_mt-on_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:11" + "Date": "2022-10-22 14:36:11", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-cardiff06/anat/sub-cardiff06_flip-2_mt-off_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-cardiff06/anat/sub-cardiff06_flip-2_mt-off_space-other_MTS_label-SC_softseg.json index 1bcf4e0cb1..2bb7485300 100644 --- a/derivatives/labels_softseg/sub-cardiff06/anat/sub-cardiff06_flip-2_mt-off_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-cardiff06/anat/sub-cardiff06_flip-2_mt-off_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:11" + "Date": "2022-10-22 14:36:11", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-cardiff06/anat/sub-cardiff06_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-cardiff06/anat/sub-cardiff06_space-other_T1w_label-SC_softseg.json index 1bcf4e0cb1..9a4c72837c 100644 --- a/derivatives/labels_softseg/sub-cardiff06/anat/sub-cardiff06_space-other_T1w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-cardiff06/anat/sub-cardiff06_space-other_T1w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:11" + "Date": "2022-10-22 14:36:11", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-cardiff06/anat/sub-cardiff06_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-cardiff06/anat/sub-cardiff06_space-other_T2star_label-SC_softseg.json index 1bcf4e0cb1..8512a4d479 100644 --- a/derivatives/labels_softseg/sub-cardiff06/anat/sub-cardiff06_space-other_T2star_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-cardiff06/anat/sub-cardiff06_space-other_T2star_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:11" + "Date": "2022-10-22 14:36:11", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-cardiff06/anat/sub-cardiff06_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-cardiff06/anat/sub-cardiff06_space-other_T2w_label-SC_softseg.json index 1bcf4e0cb1..861a1d1770 100644 --- a/derivatives/labels_softseg/sub-cardiff06/anat/sub-cardiff06_space-other_T2w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-cardiff06/anat/sub-cardiff06_space-other_T2w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:11" + "Date": "2022-10-22 14:36:11", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-cmrra01/anat/sub-cmrra01_flip-1_mt-on_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-cmrra01/anat/sub-cmrra01_flip-1_mt-on_space-other_MTS_label-SC_softseg.json index 1bcf4e0cb1..2bb7485300 100644 --- a/derivatives/labels_softseg/sub-cmrra01/anat/sub-cmrra01_flip-1_mt-on_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-cmrra01/anat/sub-cmrra01_flip-1_mt-on_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:11" + "Date": "2022-10-22 14:36:11", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-cmrra01/anat/sub-cmrra01_flip-2_mt-off_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-cmrra01/anat/sub-cmrra01_flip-2_mt-off_space-other_MTS_label-SC_softseg.json index 1bcf4e0cb1..2bb7485300 100644 --- a/derivatives/labels_softseg/sub-cmrra01/anat/sub-cmrra01_flip-2_mt-off_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-cmrra01/anat/sub-cmrra01_flip-2_mt-off_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:11" + "Date": "2022-10-22 14:36:11", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-cmrra01/anat/sub-cmrra01_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-cmrra01/anat/sub-cmrra01_space-other_T1w_label-SC_softseg.json index 1bcf4e0cb1..9a4c72837c 100644 --- a/derivatives/labels_softseg/sub-cmrra01/anat/sub-cmrra01_space-other_T1w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-cmrra01/anat/sub-cmrra01_space-other_T1w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:11" + "Date": "2022-10-22 14:36:11", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-cmrra01/anat/sub-cmrra01_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-cmrra01/anat/sub-cmrra01_space-other_T2star_label-SC_softseg.json index 908d970611..fda18c488f 100644 --- a/derivatives/labels_softseg/sub-cmrra01/anat/sub-cmrra01_space-other_T2star_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-cmrra01/anat/sub-cmrra01_space-other_T2star_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:12" + "Date": "2022-10-22 14:36:12", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-cmrra01/anat/sub-cmrra01_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-cmrra01/anat/sub-cmrra01_space-other_T2w_label-SC_softseg.json index 908d970611..8b4fd43f7d 100644 --- a/derivatives/labels_softseg/sub-cmrra01/anat/sub-cmrra01_space-other_T2w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-cmrra01/anat/sub-cmrra01_space-other_T2w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:12" + "Date": "2022-10-22 14:36:12", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-cmrra02/anat/sub-cmrra02_flip-1_mt-on_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-cmrra02/anat/sub-cmrra02_flip-1_mt-on_space-other_MTS_label-SC_softseg.json index 908d970611..28b9f3f5ed 100644 --- a/derivatives/labels_softseg/sub-cmrra02/anat/sub-cmrra02_flip-1_mt-on_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-cmrra02/anat/sub-cmrra02_flip-1_mt-on_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:12" + "Date": "2022-10-22 14:36:12", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-cmrra02/anat/sub-cmrra02_flip-2_mt-off_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-cmrra02/anat/sub-cmrra02_flip-2_mt-off_space-other_MTS_label-SC_softseg.json index 908d970611..28b9f3f5ed 100644 --- a/derivatives/labels_softseg/sub-cmrra02/anat/sub-cmrra02_flip-2_mt-off_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-cmrra02/anat/sub-cmrra02_flip-2_mt-off_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:12" + "Date": "2022-10-22 14:36:12", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-cmrra02/anat/sub-cmrra02_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-cmrra02/anat/sub-cmrra02_space-other_T1w_label-SC_softseg.json index 908d970611..fd5f1cfe1b 100644 --- a/derivatives/labels_softseg/sub-cmrra02/anat/sub-cmrra02_space-other_T1w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-cmrra02/anat/sub-cmrra02_space-other_T1w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:12" + "Date": "2022-10-22 14:36:12", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-cmrra02/anat/sub-cmrra02_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-cmrra02/anat/sub-cmrra02_space-other_T2star_label-SC_softseg.json index 908d970611..fda18c488f 100644 --- a/derivatives/labels_softseg/sub-cmrra02/anat/sub-cmrra02_space-other_T2star_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-cmrra02/anat/sub-cmrra02_space-other_T2star_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:12" + "Date": "2022-10-22 14:36:12", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-cmrra02/anat/sub-cmrra02_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-cmrra02/anat/sub-cmrra02_space-other_T2w_label-SC_softseg.json index 908d970611..8b4fd43f7d 100644 --- a/derivatives/labels_softseg/sub-cmrra02/anat/sub-cmrra02_space-other_T2w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-cmrra02/anat/sub-cmrra02_space-other_T2w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:12" + "Date": "2022-10-22 14:36:12", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-cmrra03/anat/sub-cmrra03_flip-1_mt-on_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-cmrra03/anat/sub-cmrra03_flip-1_mt-on_space-other_MTS_label-SC_softseg.json index 908d970611..28b9f3f5ed 100644 --- a/derivatives/labels_softseg/sub-cmrra03/anat/sub-cmrra03_flip-1_mt-on_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-cmrra03/anat/sub-cmrra03_flip-1_mt-on_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:12" + "Date": "2022-10-22 14:36:12", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-cmrra03/anat/sub-cmrra03_flip-2_mt-off_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-cmrra03/anat/sub-cmrra03_flip-2_mt-off_space-other_MTS_label-SC_softseg.json index 908d970611..28b9f3f5ed 100644 --- a/derivatives/labels_softseg/sub-cmrra03/anat/sub-cmrra03_flip-2_mt-off_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-cmrra03/anat/sub-cmrra03_flip-2_mt-off_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:12" + "Date": "2022-10-22 14:36:12", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-cmrra03/anat/sub-cmrra03_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-cmrra03/anat/sub-cmrra03_space-other_T1w_label-SC_softseg.json index 908d970611..fd5f1cfe1b 100644 --- a/derivatives/labels_softseg/sub-cmrra03/anat/sub-cmrra03_space-other_T1w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-cmrra03/anat/sub-cmrra03_space-other_T1w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:12" + "Date": "2022-10-22 14:36:12", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-cmrra03/anat/sub-cmrra03_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-cmrra03/anat/sub-cmrra03_space-other_T2star_label-SC_softseg.json index 908d970611..fda18c488f 100644 --- a/derivatives/labels_softseg/sub-cmrra03/anat/sub-cmrra03_space-other_T2star_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-cmrra03/anat/sub-cmrra03_space-other_T2star_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:12" + "Date": "2022-10-22 14:36:12", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-cmrra03/anat/sub-cmrra03_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-cmrra03/anat/sub-cmrra03_space-other_T2w_label-SC_softseg.json index 908d970611..8b4fd43f7d 100644 --- a/derivatives/labels_softseg/sub-cmrra03/anat/sub-cmrra03_space-other_T2w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-cmrra03/anat/sub-cmrra03_space-other_T2w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:12" + "Date": "2022-10-22 14:36:12", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-cmrra04/anat/sub-cmrra04_flip-1_mt-on_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-cmrra04/anat/sub-cmrra04_flip-1_mt-on_space-other_MTS_label-SC_softseg.json index 908d970611..28b9f3f5ed 100644 --- a/derivatives/labels_softseg/sub-cmrra04/anat/sub-cmrra04_flip-1_mt-on_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-cmrra04/anat/sub-cmrra04_flip-1_mt-on_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:12" + "Date": "2022-10-22 14:36:12", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-cmrra04/anat/sub-cmrra04_flip-2_mt-off_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-cmrra04/anat/sub-cmrra04_flip-2_mt-off_space-other_MTS_label-SC_softseg.json index 908d970611..28b9f3f5ed 100644 --- a/derivatives/labels_softseg/sub-cmrra04/anat/sub-cmrra04_flip-2_mt-off_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-cmrra04/anat/sub-cmrra04_flip-2_mt-off_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:12" + "Date": "2022-10-22 14:36:12", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-cmrra04/anat/sub-cmrra04_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-cmrra04/anat/sub-cmrra04_space-other_T1w_label-SC_softseg.json index 908d970611..fd5f1cfe1b 100644 --- a/derivatives/labels_softseg/sub-cmrra04/anat/sub-cmrra04_space-other_T1w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-cmrra04/anat/sub-cmrra04_space-other_T1w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:12" + "Date": "2022-10-22 14:36:12", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-cmrra04/anat/sub-cmrra04_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-cmrra04/anat/sub-cmrra04_space-other_T2star_label-SC_softseg.json index 908d970611..fda18c488f 100644 --- a/derivatives/labels_softseg/sub-cmrra04/anat/sub-cmrra04_space-other_T2star_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-cmrra04/anat/sub-cmrra04_space-other_T2star_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:12" + "Date": "2022-10-22 14:36:12", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-cmrra04/anat/sub-cmrra04_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-cmrra04/anat/sub-cmrra04_space-other_T2w_label-SC_softseg.json index 97c8d1f4b5..685726716c 100644 --- a/derivatives/labels_softseg/sub-cmrra04/anat/sub-cmrra04_space-other_T2w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-cmrra04/anat/sub-cmrra04_space-other_T2w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:13" + "Date": "2022-10-22 14:36:13", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-cmrra05/anat/sub-cmrra05_flip-1_mt-on_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-cmrra05/anat/sub-cmrra05_flip-1_mt-on_space-other_MTS_label-SC_softseg.json index 97c8d1f4b5..d018bd5322 100644 --- a/derivatives/labels_softseg/sub-cmrra05/anat/sub-cmrra05_flip-1_mt-on_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-cmrra05/anat/sub-cmrra05_flip-1_mt-on_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:13" + "Date": "2022-10-22 14:36:13", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-cmrra05/anat/sub-cmrra05_flip-2_mt-off_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-cmrra05/anat/sub-cmrra05_flip-2_mt-off_space-other_MTS_label-SC_softseg.json index 97c8d1f4b5..d018bd5322 100644 --- a/derivatives/labels_softseg/sub-cmrra05/anat/sub-cmrra05_flip-2_mt-off_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-cmrra05/anat/sub-cmrra05_flip-2_mt-off_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:13" + "Date": "2022-10-22 14:36:13", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-cmrra05/anat/sub-cmrra05_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-cmrra05/anat/sub-cmrra05_space-other_T1w_label-SC_softseg.json index 97c8d1f4b5..6de4af4e61 100644 --- a/derivatives/labels_softseg/sub-cmrra05/anat/sub-cmrra05_space-other_T1w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-cmrra05/anat/sub-cmrra05_space-other_T1w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:13" + "Date": "2022-10-22 14:36:13", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-cmrra05/anat/sub-cmrra05_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-cmrra05/anat/sub-cmrra05_space-other_T2star_label-SC_softseg.json index 97c8d1f4b5..5f5b22f2e4 100644 --- a/derivatives/labels_softseg/sub-cmrra05/anat/sub-cmrra05_space-other_T2star_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-cmrra05/anat/sub-cmrra05_space-other_T2star_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:13" + "Date": "2022-10-22 14:36:13", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-cmrra05/anat/sub-cmrra05_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-cmrra05/anat/sub-cmrra05_space-other_T2w_label-SC_softseg.json index 97c8d1f4b5..685726716c 100644 --- a/derivatives/labels_softseg/sub-cmrra05/anat/sub-cmrra05_space-other_T2w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-cmrra05/anat/sub-cmrra05_space-other_T2w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:13" + "Date": "2022-10-22 14:36:13", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-cmrra06/anat/sub-cmrra06_flip-1_mt-on_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-cmrra06/anat/sub-cmrra06_flip-1_mt-on_space-other_MTS_label-SC_softseg.json index 97c8d1f4b5..d018bd5322 100644 --- a/derivatives/labels_softseg/sub-cmrra06/anat/sub-cmrra06_flip-1_mt-on_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-cmrra06/anat/sub-cmrra06_flip-1_mt-on_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:13" + "Date": "2022-10-22 14:36:13", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-cmrra06/anat/sub-cmrra06_flip-2_mt-off_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-cmrra06/anat/sub-cmrra06_flip-2_mt-off_space-other_MTS_label-SC_softseg.json index 97c8d1f4b5..d018bd5322 100644 --- a/derivatives/labels_softseg/sub-cmrra06/anat/sub-cmrra06_flip-2_mt-off_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-cmrra06/anat/sub-cmrra06_flip-2_mt-off_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:13" + "Date": "2022-10-22 14:36:13", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-cmrra06/anat/sub-cmrra06_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-cmrra06/anat/sub-cmrra06_space-other_T1w_label-SC_softseg.json index 97c8d1f4b5..6de4af4e61 100644 --- a/derivatives/labels_softseg/sub-cmrra06/anat/sub-cmrra06_space-other_T1w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-cmrra06/anat/sub-cmrra06_space-other_T1w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:13" + "Date": "2022-10-22 14:36:13", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-cmrra06/anat/sub-cmrra06_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-cmrra06/anat/sub-cmrra06_space-other_T2star_label-SC_softseg.json index 97c8d1f4b5..5f5b22f2e4 100644 --- a/derivatives/labels_softseg/sub-cmrra06/anat/sub-cmrra06_space-other_T2star_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-cmrra06/anat/sub-cmrra06_space-other_T2star_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:13" + "Date": "2022-10-22 14:36:13", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-cmrra06/anat/sub-cmrra06_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-cmrra06/anat/sub-cmrra06_space-other_T2w_label-SC_softseg.json index 97c8d1f4b5..685726716c 100644 --- a/derivatives/labels_softseg/sub-cmrra06/anat/sub-cmrra06_space-other_T2w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-cmrra06/anat/sub-cmrra06_space-other_T2w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:13" + "Date": "2022-10-22 14:36:13", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-cmrrb01/anat/sub-cmrrb01_flip-1_mt-on_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-cmrrb01/anat/sub-cmrrb01_flip-1_mt-on_space-other_MTS_label-SC_softseg.json index 97c8d1f4b5..d018bd5322 100644 --- a/derivatives/labels_softseg/sub-cmrrb01/anat/sub-cmrrb01_flip-1_mt-on_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-cmrrb01/anat/sub-cmrrb01_flip-1_mt-on_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:13" + "Date": "2022-10-22 14:36:13", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-cmrrb01/anat/sub-cmrrb01_flip-2_mt-off_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-cmrrb01/anat/sub-cmrrb01_flip-2_mt-off_space-other_MTS_label-SC_softseg.json index 97c8d1f4b5..d018bd5322 100644 --- a/derivatives/labels_softseg/sub-cmrrb01/anat/sub-cmrrb01_flip-2_mt-off_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-cmrrb01/anat/sub-cmrrb01_flip-2_mt-off_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:13" + "Date": "2022-10-22 14:36:13", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-cmrrb01/anat/sub-cmrrb01_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-cmrrb01/anat/sub-cmrrb01_space-other_T1w_label-SC_softseg.json index 97c8d1f4b5..6de4af4e61 100644 --- a/derivatives/labels_softseg/sub-cmrrb01/anat/sub-cmrrb01_space-other_T1w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-cmrrb01/anat/sub-cmrrb01_space-other_T1w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:13" + "Date": "2022-10-22 14:36:13", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-cmrrb01/anat/sub-cmrrb01_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-cmrrb01/anat/sub-cmrrb01_space-other_T2star_label-SC_softseg.json index 97c8d1f4b5..5f5b22f2e4 100644 --- a/derivatives/labels_softseg/sub-cmrrb01/anat/sub-cmrrb01_space-other_T2star_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-cmrrb01/anat/sub-cmrrb01_space-other_T2star_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:13" + "Date": "2022-10-22 14:36:13", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-cmrrb01/anat/sub-cmrrb01_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-cmrrb01/anat/sub-cmrrb01_space-other_T2w_label-SC_softseg.json index 97c8d1f4b5..685726716c 100644 --- a/derivatives/labels_softseg/sub-cmrrb01/anat/sub-cmrrb01_space-other_T2w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-cmrrb01/anat/sub-cmrrb01_space-other_T2w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:13" + "Date": "2022-10-22 14:36:13", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-cmrrb02/anat/sub-cmrrb02_flip-1_mt-on_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-cmrrb02/anat/sub-cmrrb02_flip-1_mt-on_space-other_MTS_label-SC_softseg.json index 97c8d1f4b5..d018bd5322 100644 --- a/derivatives/labels_softseg/sub-cmrrb02/anat/sub-cmrrb02_flip-1_mt-on_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-cmrrb02/anat/sub-cmrrb02_flip-1_mt-on_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:13" + "Date": "2022-10-22 14:36:13", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-cmrrb02/anat/sub-cmrrb02_flip-2_mt-off_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-cmrrb02/anat/sub-cmrrb02_flip-2_mt-off_space-other_MTS_label-SC_softseg.json index 97c8d1f4b5..d018bd5322 100644 --- a/derivatives/labels_softseg/sub-cmrrb02/anat/sub-cmrrb02_flip-2_mt-off_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-cmrrb02/anat/sub-cmrrb02_flip-2_mt-off_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:13" + "Date": "2022-10-22 14:36:13", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-cmrrb02/anat/sub-cmrrb02_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-cmrrb02/anat/sub-cmrrb02_space-other_T1w_label-SC_softseg.json index 97c8d1f4b5..6de4af4e61 100644 --- a/derivatives/labels_softseg/sub-cmrrb02/anat/sub-cmrrb02_space-other_T1w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-cmrrb02/anat/sub-cmrrb02_space-other_T1w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:13" + "Date": "2022-10-22 14:36:13", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-cmrrb02/anat/sub-cmrrb02_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-cmrrb02/anat/sub-cmrrb02_space-other_T2star_label-SC_softseg.json index 97c8d1f4b5..5f5b22f2e4 100644 --- a/derivatives/labels_softseg/sub-cmrrb02/anat/sub-cmrrb02_space-other_T2star_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-cmrrb02/anat/sub-cmrrb02_space-other_T2star_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:13" + "Date": "2022-10-22 14:36:13", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-cmrrb02/anat/sub-cmrrb02_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-cmrrb02/anat/sub-cmrrb02_space-other_T2w_label-SC_softseg.json index 97c8d1f4b5..685726716c 100644 --- a/derivatives/labels_softseg/sub-cmrrb02/anat/sub-cmrrb02_space-other_T2w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-cmrrb02/anat/sub-cmrrb02_space-other_T2w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:13" + "Date": "2022-10-22 14:36:13", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-cmrrb03/anat/sub-cmrrb03_flip-1_mt-on_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-cmrrb03/anat/sub-cmrrb03_flip-1_mt-on_space-other_MTS_label-SC_softseg.json index 97c8d1f4b5..d018bd5322 100644 --- a/derivatives/labels_softseg/sub-cmrrb03/anat/sub-cmrrb03_flip-1_mt-on_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-cmrrb03/anat/sub-cmrrb03_flip-1_mt-on_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:13" + "Date": "2022-10-22 14:36:13", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-cmrrb03/anat/sub-cmrrb03_flip-2_mt-off_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-cmrrb03/anat/sub-cmrrb03_flip-2_mt-off_space-other_MTS_label-SC_softseg.json index 97c8d1f4b5..d018bd5322 100644 --- a/derivatives/labels_softseg/sub-cmrrb03/anat/sub-cmrrb03_flip-2_mt-off_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-cmrrb03/anat/sub-cmrrb03_flip-2_mt-off_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:13" + "Date": "2022-10-22 14:36:13", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-cmrrb03/anat/sub-cmrrb03_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-cmrrb03/anat/sub-cmrrb03_space-other_T1w_label-SC_softseg.json index 6676a57b56..4b916fbbf0 100644 --- a/derivatives/labels_softseg/sub-cmrrb03/anat/sub-cmrrb03_space-other_T1w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-cmrrb03/anat/sub-cmrrb03_space-other_T1w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:14" + "Date": "2022-10-22 14:36:14", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-cmrrb03/anat/sub-cmrrb03_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-cmrrb03/anat/sub-cmrrb03_space-other_T2star_label-SC_softseg.json index 6676a57b56..a2b8bf1f15 100644 --- a/derivatives/labels_softseg/sub-cmrrb03/anat/sub-cmrrb03_space-other_T2star_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-cmrrb03/anat/sub-cmrrb03_space-other_T2star_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:14" + "Date": "2022-10-22 14:36:14", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-cmrrb03/anat/sub-cmrrb03_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-cmrrb03/anat/sub-cmrrb03_space-other_T2w_label-SC_softseg.json index 6676a57b56..a527f4caa7 100644 --- a/derivatives/labels_softseg/sub-cmrrb03/anat/sub-cmrrb03_space-other_T2w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-cmrrb03/anat/sub-cmrrb03_space-other_T2w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:14" + "Date": "2022-10-22 14:36:14", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-cmrrb04/anat/sub-cmrrb04_flip-1_mt-on_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-cmrrb04/anat/sub-cmrrb04_flip-1_mt-on_space-other_MTS_label-SC_softseg.json index 6676a57b56..f56c694355 100644 --- a/derivatives/labels_softseg/sub-cmrrb04/anat/sub-cmrrb04_flip-1_mt-on_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-cmrrb04/anat/sub-cmrrb04_flip-1_mt-on_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:14" + "Date": "2022-10-22 14:36:14", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-cmrrb04/anat/sub-cmrrb04_flip-2_mt-off_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-cmrrb04/anat/sub-cmrrb04_flip-2_mt-off_space-other_MTS_label-SC_softseg.json index 6676a57b56..f56c694355 100644 --- a/derivatives/labels_softseg/sub-cmrrb04/anat/sub-cmrrb04_flip-2_mt-off_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-cmrrb04/anat/sub-cmrrb04_flip-2_mt-off_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:14" + "Date": "2022-10-22 14:36:14", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-cmrrb04/anat/sub-cmrrb04_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-cmrrb04/anat/sub-cmrrb04_space-other_T1w_label-SC_softseg.json index 6676a57b56..4b916fbbf0 100644 --- a/derivatives/labels_softseg/sub-cmrrb04/anat/sub-cmrrb04_space-other_T1w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-cmrrb04/anat/sub-cmrrb04_space-other_T1w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:14" + "Date": "2022-10-22 14:36:14", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-cmrrb04/anat/sub-cmrrb04_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-cmrrb04/anat/sub-cmrrb04_space-other_T2star_label-SC_softseg.json index 6676a57b56..a2b8bf1f15 100644 --- a/derivatives/labels_softseg/sub-cmrrb04/anat/sub-cmrrb04_space-other_T2star_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-cmrrb04/anat/sub-cmrrb04_space-other_T2star_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:14" + "Date": "2022-10-22 14:36:14", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-cmrrb04/anat/sub-cmrrb04_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-cmrrb04/anat/sub-cmrrb04_space-other_T2w_label-SC_softseg.json index 6676a57b56..a527f4caa7 100644 --- a/derivatives/labels_softseg/sub-cmrrb04/anat/sub-cmrrb04_space-other_T2w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-cmrrb04/anat/sub-cmrrb04_space-other_T2w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:14" + "Date": "2022-10-22 14:36:14", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-cmrrb05/anat/sub-cmrrb05_flip-1_mt-on_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-cmrrb05/anat/sub-cmrrb05_flip-1_mt-on_space-other_MTS_label-SC_softseg.json index 6676a57b56..f56c694355 100644 --- a/derivatives/labels_softseg/sub-cmrrb05/anat/sub-cmrrb05_flip-1_mt-on_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-cmrrb05/anat/sub-cmrrb05_flip-1_mt-on_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:14" + "Date": "2022-10-22 14:36:14", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-cmrrb05/anat/sub-cmrrb05_flip-2_mt-off_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-cmrrb05/anat/sub-cmrrb05_flip-2_mt-off_space-other_MTS_label-SC_softseg.json index 6676a57b56..f56c694355 100644 --- a/derivatives/labels_softseg/sub-cmrrb05/anat/sub-cmrrb05_flip-2_mt-off_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-cmrrb05/anat/sub-cmrrb05_flip-2_mt-off_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:14" + "Date": "2022-10-22 14:36:14", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-cmrrb05/anat/sub-cmrrb05_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-cmrrb05/anat/sub-cmrrb05_space-other_T1w_label-SC_softseg.json index 6676a57b56..4b916fbbf0 100644 --- a/derivatives/labels_softseg/sub-cmrrb05/anat/sub-cmrrb05_space-other_T1w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-cmrrb05/anat/sub-cmrrb05_space-other_T1w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:14" + "Date": "2022-10-22 14:36:14", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-cmrrb05/anat/sub-cmrrb05_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-cmrrb05/anat/sub-cmrrb05_space-other_T2star_label-SC_softseg.json index 6676a57b56..a2b8bf1f15 100644 --- a/derivatives/labels_softseg/sub-cmrrb05/anat/sub-cmrrb05_space-other_T2star_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-cmrrb05/anat/sub-cmrrb05_space-other_T2star_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:14" + "Date": "2022-10-22 14:36:14", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-cmrrb05/anat/sub-cmrrb05_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-cmrrb05/anat/sub-cmrrb05_space-other_T2w_label-SC_softseg.json index 6676a57b56..a527f4caa7 100644 --- a/derivatives/labels_softseg/sub-cmrrb05/anat/sub-cmrrb05_space-other_T2w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-cmrrb05/anat/sub-cmrrb05_space-other_T2w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:14" + "Date": "2022-10-22 14:36:14", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-cmrrb06/anat/sub-cmrrb06_flip-1_mt-on_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-cmrrb06/anat/sub-cmrrb06_flip-1_mt-on_space-other_MTS_label-SC_softseg.json index 6676a57b56..f56c694355 100644 --- a/derivatives/labels_softseg/sub-cmrrb06/anat/sub-cmrrb06_flip-1_mt-on_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-cmrrb06/anat/sub-cmrrb06_flip-1_mt-on_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:14" + "Date": "2022-10-22 14:36:14", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-cmrrb06/anat/sub-cmrrb06_flip-2_mt-off_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-cmrrb06/anat/sub-cmrrb06_flip-2_mt-off_space-other_MTS_label-SC_softseg.json index 6676a57b56..f56c694355 100644 --- a/derivatives/labels_softseg/sub-cmrrb06/anat/sub-cmrrb06_flip-2_mt-off_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-cmrrb06/anat/sub-cmrrb06_flip-2_mt-off_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:14" + "Date": "2022-10-22 14:36:14", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-cmrrb06/anat/sub-cmrrb06_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-cmrrb06/anat/sub-cmrrb06_space-other_T1w_label-SC_softseg.json index 6676a57b56..4b916fbbf0 100644 --- a/derivatives/labels_softseg/sub-cmrrb06/anat/sub-cmrrb06_space-other_T1w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-cmrrb06/anat/sub-cmrrb06_space-other_T1w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:14" + "Date": "2022-10-22 14:36:14", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-cmrrb06/anat/sub-cmrrb06_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-cmrrb06/anat/sub-cmrrb06_space-other_T2star_label-SC_softseg.json index 6676a57b56..a2b8bf1f15 100644 --- a/derivatives/labels_softseg/sub-cmrrb06/anat/sub-cmrrb06_space-other_T2star_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-cmrrb06/anat/sub-cmrrb06_space-other_T2star_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:14" + "Date": "2022-10-22 14:36:14", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-cmrrb06/anat/sub-cmrrb06_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-cmrrb06/anat/sub-cmrrb06_space-other_T2w_label-SC_softseg.json index 6676a57b56..a527f4caa7 100644 --- a/derivatives/labels_softseg/sub-cmrrb06/anat/sub-cmrrb06_space-other_T2w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-cmrrb06/anat/sub-cmrrb06_space-other_T2w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:14" + "Date": "2022-10-22 14:36:14", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-cmrrb07/anat/sub-cmrrb07_flip-1_mt-on_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-cmrrb07/anat/sub-cmrrb07_flip-1_mt-on_space-other_MTS_label-SC_softseg.json index 6676a57b56..f56c694355 100644 --- a/derivatives/labels_softseg/sub-cmrrb07/anat/sub-cmrrb07_flip-1_mt-on_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-cmrrb07/anat/sub-cmrrb07_flip-1_mt-on_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:14" + "Date": "2022-10-22 14:36:14", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-cmrrb07/anat/sub-cmrrb07_flip-2_mt-off_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-cmrrb07/anat/sub-cmrrb07_flip-2_mt-off_space-other_MTS_label-SC_softseg.json index 6676a57b56..f56c694355 100644 --- a/derivatives/labels_softseg/sub-cmrrb07/anat/sub-cmrrb07_flip-2_mt-off_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-cmrrb07/anat/sub-cmrrb07_flip-2_mt-off_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:14" + "Date": "2022-10-22 14:36:14", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-cmrrb07/anat/sub-cmrrb07_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-cmrrb07/anat/sub-cmrrb07_space-other_T1w_label-SC_softseg.json index a5005f8c01..24c413d664 100644 --- a/derivatives/labels_softseg/sub-cmrrb07/anat/sub-cmrrb07_space-other_T1w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-cmrrb07/anat/sub-cmrrb07_space-other_T1w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:15" + "Date": "2022-10-22 14:36:15", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-cmrrb07/anat/sub-cmrrb07_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-cmrrb07/anat/sub-cmrrb07_space-other_T2star_label-SC_softseg.json index a5005f8c01..0e4b0dc815 100644 --- a/derivatives/labels_softseg/sub-cmrrb07/anat/sub-cmrrb07_space-other_T2star_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-cmrrb07/anat/sub-cmrrb07_space-other_T2star_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:15" + "Date": "2022-10-22 14:36:15", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-cmrrb07/anat/sub-cmrrb07_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-cmrrb07/anat/sub-cmrrb07_space-other_T2w_label-SC_softseg.json index a5005f8c01..11c6de13b3 100644 --- a/derivatives/labels_softseg/sub-cmrrb07/anat/sub-cmrrb07_space-other_T2w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-cmrrb07/anat/sub-cmrrb07_space-other_T2w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:15" + "Date": "2022-10-22 14:36:15", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-dresden01/anat/sub-dresden01_flip-1_mt-on_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-dresden01/anat/sub-dresden01_flip-1_mt-on_space-other_MTS_label-SC_softseg.json index a5005f8c01..2ab6ceb113 100644 --- a/derivatives/labels_softseg/sub-dresden01/anat/sub-dresden01_flip-1_mt-on_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-dresden01/anat/sub-dresden01_flip-1_mt-on_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:15" + "Date": "2022-10-22 14:36:15", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-dresden01/anat/sub-dresden01_flip-2_mt-off_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-dresden01/anat/sub-dresden01_flip-2_mt-off_space-other_MTS_label-SC_softseg.json index a5005f8c01..2ab6ceb113 100644 --- a/derivatives/labels_softseg/sub-dresden01/anat/sub-dresden01_flip-2_mt-off_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-dresden01/anat/sub-dresden01_flip-2_mt-off_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:15" + "Date": "2022-10-22 14:36:15", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-dresden01/anat/sub-dresden01_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-dresden01/anat/sub-dresden01_space-other_T1w_label-SC_softseg.json index a5005f8c01..24c413d664 100644 --- a/derivatives/labels_softseg/sub-dresden01/anat/sub-dresden01_space-other_T1w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-dresden01/anat/sub-dresden01_space-other_T1w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:15" + "Date": "2022-10-22 14:36:15", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-dresden01/anat/sub-dresden01_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-dresden01/anat/sub-dresden01_space-other_T2star_label-SC_softseg.json index a5005f8c01..0e4b0dc815 100644 --- a/derivatives/labels_softseg/sub-dresden01/anat/sub-dresden01_space-other_T2star_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-dresden01/anat/sub-dresden01_space-other_T2star_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:15" + "Date": "2022-10-22 14:36:15", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-dresden01/anat/sub-dresden01_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-dresden01/anat/sub-dresden01_space-other_T2w_label-SC_softseg.json index a5005f8c01..11c6de13b3 100644 --- a/derivatives/labels_softseg/sub-dresden01/anat/sub-dresden01_space-other_T2w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-dresden01/anat/sub-dresden01_space-other_T2w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:15" + "Date": "2022-10-22 14:36:15", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-dresden02/anat/sub-dresden02_flip-1_mt-on_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-dresden02/anat/sub-dresden02_flip-1_mt-on_space-other_MTS_label-SC_softseg.json index a5005f8c01..2ab6ceb113 100644 --- a/derivatives/labels_softseg/sub-dresden02/anat/sub-dresden02_flip-1_mt-on_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-dresden02/anat/sub-dresden02_flip-1_mt-on_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:15" + "Date": "2022-10-22 14:36:15", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-dresden02/anat/sub-dresden02_flip-2_mt-off_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-dresden02/anat/sub-dresden02_flip-2_mt-off_space-other_MTS_label-SC_softseg.json index a5005f8c01..2ab6ceb113 100644 --- a/derivatives/labels_softseg/sub-dresden02/anat/sub-dresden02_flip-2_mt-off_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-dresden02/anat/sub-dresden02_flip-2_mt-off_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:15" + "Date": "2022-10-22 14:36:15", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-dresden02/anat/sub-dresden02_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-dresden02/anat/sub-dresden02_space-other_T1w_label-SC_softseg.json index a5005f8c01..24c413d664 100644 --- a/derivatives/labels_softseg/sub-dresden02/anat/sub-dresden02_space-other_T1w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-dresden02/anat/sub-dresden02_space-other_T1w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:15" + "Date": "2022-10-22 14:36:15", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-dresden02/anat/sub-dresden02_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-dresden02/anat/sub-dresden02_space-other_T2star_label-SC_softseg.json index a5005f8c01..0e4b0dc815 100644 --- a/derivatives/labels_softseg/sub-dresden02/anat/sub-dresden02_space-other_T2star_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-dresden02/anat/sub-dresden02_space-other_T2star_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:15" + "Date": "2022-10-22 14:36:15", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-dresden02/anat/sub-dresden02_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-dresden02/anat/sub-dresden02_space-other_T2w_label-SC_softseg.json index a5005f8c01..11c6de13b3 100644 --- a/derivatives/labels_softseg/sub-dresden02/anat/sub-dresden02_space-other_T2w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-dresden02/anat/sub-dresden02_space-other_T2w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:15" + "Date": "2022-10-22 14:36:15", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-fslAchieva01/anat/sub-fslAchieva01_flip-1_mt-on_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-fslAchieva01/anat/sub-fslAchieva01_flip-1_mt-on_space-other_MTS_label-SC_softseg.json index a5005f8c01..2ab6ceb113 100644 --- a/derivatives/labels_softseg/sub-fslAchieva01/anat/sub-fslAchieva01_flip-1_mt-on_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-fslAchieva01/anat/sub-fslAchieva01_flip-1_mt-on_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:15" + "Date": "2022-10-22 14:36:15", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-fslAchieva01/anat/sub-fslAchieva01_flip-2_mt-off_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-fslAchieva01/anat/sub-fslAchieva01_flip-2_mt-off_space-other_MTS_label-SC_softseg.json index a5005f8c01..2ab6ceb113 100644 --- a/derivatives/labels_softseg/sub-fslAchieva01/anat/sub-fslAchieva01_flip-2_mt-off_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-fslAchieva01/anat/sub-fslAchieva01_flip-2_mt-off_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:15" + "Date": "2022-10-22 14:36:15", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-fslAchieva01/anat/sub-fslAchieva01_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-fslAchieva01/anat/sub-fslAchieva01_space-other_T1w_label-SC_softseg.json index a5005f8c01..24c413d664 100644 --- a/derivatives/labels_softseg/sub-fslAchieva01/anat/sub-fslAchieva01_space-other_T1w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-fslAchieva01/anat/sub-fslAchieva01_space-other_T1w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:15" + "Date": "2022-10-22 14:36:15", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-fslAchieva01/anat/sub-fslAchieva01_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-fslAchieva01/anat/sub-fslAchieva01_space-other_T2star_label-SC_softseg.json index a5005f8c01..0e4b0dc815 100644 --- a/derivatives/labels_softseg/sub-fslAchieva01/anat/sub-fslAchieva01_space-other_T2star_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-fslAchieva01/anat/sub-fslAchieva01_space-other_T2star_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:15" + "Date": "2022-10-22 14:36:15", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-fslAchieva01/anat/sub-fslAchieva01_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-fslAchieva01/anat/sub-fslAchieva01_space-other_T2w_label-SC_softseg.json index a5005f8c01..11c6de13b3 100644 --- a/derivatives/labels_softseg/sub-fslAchieva01/anat/sub-fslAchieva01_space-other_T2w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-fslAchieva01/anat/sub-fslAchieva01_space-other_T2w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:15" + "Date": "2022-10-22 14:36:15", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-fslAchieva02/anat/sub-fslAchieva02_flip-1_mt-on_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-fslAchieva02/anat/sub-fslAchieva02_flip-1_mt-on_space-other_MTS_label-SC_softseg.json index a5005f8c01..2ab6ceb113 100644 --- a/derivatives/labels_softseg/sub-fslAchieva02/anat/sub-fslAchieva02_flip-1_mt-on_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-fslAchieva02/anat/sub-fslAchieva02_flip-1_mt-on_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:15" + "Date": "2022-10-22 14:36:15", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-fslAchieva02/anat/sub-fslAchieva02_flip-2_mt-off_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-fslAchieva02/anat/sub-fslAchieva02_flip-2_mt-off_space-other_MTS_label-SC_softseg.json index a5005f8c01..2ab6ceb113 100644 --- a/derivatives/labels_softseg/sub-fslAchieva02/anat/sub-fslAchieva02_flip-2_mt-off_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-fslAchieva02/anat/sub-fslAchieva02_flip-2_mt-off_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:15" + "Date": "2022-10-22 14:36:15", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-fslAchieva02/anat/sub-fslAchieva02_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-fslAchieva02/anat/sub-fslAchieva02_space-other_T1w_label-SC_softseg.json index 0ca96228a3..cc6819b606 100644 --- a/derivatives/labels_softseg/sub-fslAchieva02/anat/sub-fslAchieva02_space-other_T1w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-fslAchieva02/anat/sub-fslAchieva02_space-other_T1w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:16" + "Date": "2022-10-22 14:36:16", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-fslAchieva02/anat/sub-fslAchieva02_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-fslAchieva02/anat/sub-fslAchieva02_space-other_T2star_label-SC_softseg.json index 0ca96228a3..8c55da5a5b 100644 --- a/derivatives/labels_softseg/sub-fslAchieva02/anat/sub-fslAchieva02_space-other_T2star_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-fslAchieva02/anat/sub-fslAchieva02_space-other_T2star_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:16" + "Date": "2022-10-22 14:36:16", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-fslAchieva02/anat/sub-fslAchieva02_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-fslAchieva02/anat/sub-fslAchieva02_space-other_T2w_label-SC_softseg.json index 0ca96228a3..d9d606bdfb 100644 --- a/derivatives/labels_softseg/sub-fslAchieva02/anat/sub-fslAchieva02_space-other_T2w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-fslAchieva02/anat/sub-fslAchieva02_space-other_T2w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:16" + "Date": "2022-10-22 14:36:16", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-fslAchieva03/anat/sub-fslAchieva03_flip-1_mt-on_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-fslAchieva03/anat/sub-fslAchieva03_flip-1_mt-on_space-other_MTS_label-SC_softseg.json index 0ca96228a3..6157a25edf 100644 --- a/derivatives/labels_softseg/sub-fslAchieva03/anat/sub-fslAchieva03_flip-1_mt-on_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-fslAchieva03/anat/sub-fslAchieva03_flip-1_mt-on_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:16" + "Date": "2022-10-22 14:36:16", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-fslAchieva03/anat/sub-fslAchieva03_flip-2_mt-off_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-fslAchieva03/anat/sub-fslAchieva03_flip-2_mt-off_space-other_MTS_label-SC_softseg.json index 0ca96228a3..6157a25edf 100644 --- a/derivatives/labels_softseg/sub-fslAchieva03/anat/sub-fslAchieva03_flip-2_mt-off_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-fslAchieva03/anat/sub-fslAchieva03_flip-2_mt-off_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:16" + "Date": "2022-10-22 14:36:16", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-fslAchieva03/anat/sub-fslAchieva03_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-fslAchieva03/anat/sub-fslAchieva03_space-other_T1w_label-SC_softseg.json index 0ca96228a3..cc6819b606 100644 --- a/derivatives/labels_softseg/sub-fslAchieva03/anat/sub-fslAchieva03_space-other_T1w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-fslAchieva03/anat/sub-fslAchieva03_space-other_T1w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:16" + "Date": "2022-10-22 14:36:16", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-fslAchieva03/anat/sub-fslAchieva03_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-fslAchieva03/anat/sub-fslAchieva03_space-other_T2star_label-SC_softseg.json index 0ca96228a3..8c55da5a5b 100644 --- a/derivatives/labels_softseg/sub-fslAchieva03/anat/sub-fslAchieva03_space-other_T2star_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-fslAchieva03/anat/sub-fslAchieva03_space-other_T2star_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:16" + "Date": "2022-10-22 14:36:16", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-fslAchieva03/anat/sub-fslAchieva03_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-fslAchieva03/anat/sub-fslAchieva03_space-other_T2w_label-SC_softseg.json index 0ca96228a3..d9d606bdfb 100644 --- a/derivatives/labels_softseg/sub-fslAchieva03/anat/sub-fslAchieva03_space-other_T2w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-fslAchieva03/anat/sub-fslAchieva03_space-other_T2w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:16" + "Date": "2022-10-22 14:36:16", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-fslAchieva04/anat/sub-fslAchieva04_flip-1_mt-on_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-fslAchieva04/anat/sub-fslAchieva04_flip-1_mt-on_space-other_MTS_label-SC_softseg.json index 0ca96228a3..6157a25edf 100644 --- a/derivatives/labels_softseg/sub-fslAchieva04/anat/sub-fslAchieva04_flip-1_mt-on_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-fslAchieva04/anat/sub-fslAchieva04_flip-1_mt-on_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:16" + "Date": "2022-10-22 14:36:16", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-fslAchieva04/anat/sub-fslAchieva04_flip-2_mt-off_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-fslAchieva04/anat/sub-fslAchieva04_flip-2_mt-off_space-other_MTS_label-SC_softseg.json index 0ca96228a3..6157a25edf 100644 --- a/derivatives/labels_softseg/sub-fslAchieva04/anat/sub-fslAchieva04_flip-2_mt-off_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-fslAchieva04/anat/sub-fslAchieva04_flip-2_mt-off_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:16" + "Date": "2022-10-22 14:36:16", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-fslAchieva04/anat/sub-fslAchieva04_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-fslAchieva04/anat/sub-fslAchieva04_space-other_T1w_label-SC_softseg.json index 0ca96228a3..cc6819b606 100644 --- a/derivatives/labels_softseg/sub-fslAchieva04/anat/sub-fslAchieva04_space-other_T1w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-fslAchieva04/anat/sub-fslAchieva04_space-other_T1w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:16" + "Date": "2022-10-22 14:36:16", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-fslAchieva04/anat/sub-fslAchieva04_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-fslAchieva04/anat/sub-fslAchieva04_space-other_T2star_label-SC_softseg.json index 0ca96228a3..8c55da5a5b 100644 --- a/derivatives/labels_softseg/sub-fslAchieva04/anat/sub-fslAchieva04_space-other_T2star_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-fslAchieva04/anat/sub-fslAchieva04_space-other_T2star_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:16" + "Date": "2022-10-22 14:36:16", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-fslAchieva04/anat/sub-fslAchieva04_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-fslAchieva04/anat/sub-fslAchieva04_space-other_T2w_label-SC_softseg.json index 0ca96228a3..d9d606bdfb 100644 --- a/derivatives/labels_softseg/sub-fslAchieva04/anat/sub-fslAchieva04_space-other_T2w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-fslAchieva04/anat/sub-fslAchieva04_space-other_T2w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:16" + "Date": "2022-10-22 14:36:16", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-fslAchieva05/anat/sub-fslAchieva05_flip-1_mt-on_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-fslAchieva05/anat/sub-fslAchieva05_flip-1_mt-on_space-other_MTS_label-SC_softseg.json index 0ca96228a3..6157a25edf 100644 --- a/derivatives/labels_softseg/sub-fslAchieva05/anat/sub-fslAchieva05_flip-1_mt-on_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-fslAchieva05/anat/sub-fslAchieva05_flip-1_mt-on_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:16" + "Date": "2022-10-22 14:36:16", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-fslAchieva05/anat/sub-fslAchieva05_flip-2_mt-off_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-fslAchieva05/anat/sub-fslAchieva05_flip-2_mt-off_space-other_MTS_label-SC_softseg.json index 0ca96228a3..6157a25edf 100644 --- a/derivatives/labels_softseg/sub-fslAchieva05/anat/sub-fslAchieva05_flip-2_mt-off_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-fslAchieva05/anat/sub-fslAchieva05_flip-2_mt-off_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:16" + "Date": "2022-10-22 14:36:16", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-fslAchieva05/anat/sub-fslAchieva05_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-fslAchieva05/anat/sub-fslAchieva05_space-other_T1w_label-SC_softseg.json index 0ca96228a3..cc6819b606 100644 --- a/derivatives/labels_softseg/sub-fslAchieva05/anat/sub-fslAchieva05_space-other_T1w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-fslAchieva05/anat/sub-fslAchieva05_space-other_T1w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:16" + "Date": "2022-10-22 14:36:16", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-fslAchieva05/anat/sub-fslAchieva05_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-fslAchieva05/anat/sub-fslAchieva05_space-other_T2star_label-SC_softseg.json index 0ca96228a3..8c55da5a5b 100644 --- a/derivatives/labels_softseg/sub-fslAchieva05/anat/sub-fslAchieva05_space-other_T2star_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-fslAchieva05/anat/sub-fslAchieva05_space-other_T2star_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:16" + "Date": "2022-10-22 14:36:16", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-fslAchieva05/anat/sub-fslAchieva05_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-fslAchieva05/anat/sub-fslAchieva05_space-other_T2w_label-SC_softseg.json index 0ca96228a3..d9d606bdfb 100644 --- a/derivatives/labels_softseg/sub-fslAchieva05/anat/sub-fslAchieva05_space-other_T2w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-fslAchieva05/anat/sub-fslAchieva05_space-other_T2w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:16" + "Date": "2022-10-22 14:36:16", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-fslAchieva06/anat/sub-fslAchieva06_flip-1_mt-on_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-fslAchieva06/anat/sub-fslAchieva06_flip-1_mt-on_space-other_MTS_label-SC_softseg.json index 0ca96228a3..6157a25edf 100644 --- a/derivatives/labels_softseg/sub-fslAchieva06/anat/sub-fslAchieva06_flip-1_mt-on_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-fslAchieva06/anat/sub-fslAchieva06_flip-1_mt-on_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:16" + "Date": "2022-10-22 14:36:16", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-fslAchieva06/anat/sub-fslAchieva06_flip-2_mt-off_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-fslAchieva06/anat/sub-fslAchieva06_flip-2_mt-off_space-other_MTS_label-SC_softseg.json index 0ca96228a3..6157a25edf 100644 --- a/derivatives/labels_softseg/sub-fslAchieva06/anat/sub-fslAchieva06_flip-2_mt-off_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-fslAchieva06/anat/sub-fslAchieva06_flip-2_mt-off_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:16" + "Date": "2022-10-22 14:36:16", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-fslAchieva06/anat/sub-fslAchieva06_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-fslAchieva06/anat/sub-fslAchieva06_space-other_T1w_label-SC_softseg.json index 0ca96228a3..cc6819b606 100644 --- a/derivatives/labels_softseg/sub-fslAchieva06/anat/sub-fslAchieva06_space-other_T1w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-fslAchieva06/anat/sub-fslAchieva06_space-other_T1w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:16" + "Date": "2022-10-22 14:36:16", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-fslAchieva06/anat/sub-fslAchieva06_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-fslAchieva06/anat/sub-fslAchieva06_space-other_T2star_label-SC_softseg.json index c53db7f5dd..85ff7f8eab 100644 --- a/derivatives/labels_softseg/sub-fslAchieva06/anat/sub-fslAchieva06_space-other_T2star_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-fslAchieva06/anat/sub-fslAchieva06_space-other_T2star_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:17" + "Date": "2022-10-22 14:36:17", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-fslAchieva06/anat/sub-fslAchieva06_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-fslAchieva06/anat/sub-fslAchieva06_space-other_T2w_label-SC_softseg.json index c53db7f5dd..8d15be0889 100644 --- a/derivatives/labels_softseg/sub-fslAchieva06/anat/sub-fslAchieva06_space-other_T2w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-fslAchieva06/anat/sub-fslAchieva06_space-other_T2w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:17" + "Date": "2022-10-22 14:36:17", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-fslPrisma01/anat/sub-fslPrisma01_flip-1_mt-on_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-fslPrisma01/anat/sub-fslPrisma01_flip-1_mt-on_space-other_MTS_label-SC_softseg.json index c53db7f5dd..506bbdcda7 100644 --- a/derivatives/labels_softseg/sub-fslPrisma01/anat/sub-fslPrisma01_flip-1_mt-on_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-fslPrisma01/anat/sub-fslPrisma01_flip-1_mt-on_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:17" + "Date": "2022-10-22 14:36:17", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-fslPrisma01/anat/sub-fslPrisma01_flip-2_mt-off_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-fslPrisma01/anat/sub-fslPrisma01_flip-2_mt-off_space-other_MTS_label-SC_softseg.json index c53db7f5dd..506bbdcda7 100644 --- a/derivatives/labels_softseg/sub-fslPrisma01/anat/sub-fslPrisma01_flip-2_mt-off_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-fslPrisma01/anat/sub-fslPrisma01_flip-2_mt-off_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:17" + "Date": "2022-10-22 14:36:17", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-fslPrisma01/anat/sub-fslPrisma01_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-fslPrisma01/anat/sub-fslPrisma01_space-other_T1w_label-SC_softseg.json index c53db7f5dd..34e844bd32 100644 --- a/derivatives/labels_softseg/sub-fslPrisma01/anat/sub-fslPrisma01_space-other_T1w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-fslPrisma01/anat/sub-fslPrisma01_space-other_T1w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:17" + "Date": "2022-10-22 14:36:17", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-fslPrisma01/anat/sub-fslPrisma01_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-fslPrisma01/anat/sub-fslPrisma01_space-other_T2star_label-SC_softseg.json index c53db7f5dd..85ff7f8eab 100644 --- a/derivatives/labels_softseg/sub-fslPrisma01/anat/sub-fslPrisma01_space-other_T2star_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-fslPrisma01/anat/sub-fslPrisma01_space-other_T2star_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:17" + "Date": "2022-10-22 14:36:17", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-fslPrisma01/anat/sub-fslPrisma01_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-fslPrisma01/anat/sub-fslPrisma01_space-other_T2w_label-SC_softseg.json index c53db7f5dd..8d15be0889 100644 --- a/derivatives/labels_softseg/sub-fslPrisma01/anat/sub-fslPrisma01_space-other_T2w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-fslPrisma01/anat/sub-fslPrisma01_space-other_T2w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:17" + "Date": "2022-10-22 14:36:17", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-fslPrisma02/anat/sub-fslPrisma02_flip-1_mt-on_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-fslPrisma02/anat/sub-fslPrisma02_flip-1_mt-on_space-other_MTS_label-SC_softseg.json index c53db7f5dd..506bbdcda7 100644 --- a/derivatives/labels_softseg/sub-fslPrisma02/anat/sub-fslPrisma02_flip-1_mt-on_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-fslPrisma02/anat/sub-fslPrisma02_flip-1_mt-on_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:17" + "Date": "2022-10-22 14:36:17", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-fslPrisma02/anat/sub-fslPrisma02_flip-2_mt-off_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-fslPrisma02/anat/sub-fslPrisma02_flip-2_mt-off_space-other_MTS_label-SC_softseg.json index c53db7f5dd..506bbdcda7 100644 --- a/derivatives/labels_softseg/sub-fslPrisma02/anat/sub-fslPrisma02_flip-2_mt-off_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-fslPrisma02/anat/sub-fslPrisma02_flip-2_mt-off_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:17" + "Date": "2022-10-22 14:36:17", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-fslPrisma02/anat/sub-fslPrisma02_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-fslPrisma02/anat/sub-fslPrisma02_space-other_T1w_label-SC_softseg.json index c53db7f5dd..34e844bd32 100644 --- a/derivatives/labels_softseg/sub-fslPrisma02/anat/sub-fslPrisma02_space-other_T1w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-fslPrisma02/anat/sub-fslPrisma02_space-other_T1w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:17" + "Date": "2022-10-22 14:36:17", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-fslPrisma02/anat/sub-fslPrisma02_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-fslPrisma02/anat/sub-fslPrisma02_space-other_T2star_label-SC_softseg.json index c53db7f5dd..85ff7f8eab 100644 --- a/derivatives/labels_softseg/sub-fslPrisma02/anat/sub-fslPrisma02_space-other_T2star_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-fslPrisma02/anat/sub-fslPrisma02_space-other_T2star_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:17" + "Date": "2022-10-22 14:36:17", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-fslPrisma02/anat/sub-fslPrisma02_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-fslPrisma02/anat/sub-fslPrisma02_space-other_T2w_label-SC_softseg.json index c53db7f5dd..8d15be0889 100644 --- a/derivatives/labels_softseg/sub-fslPrisma02/anat/sub-fslPrisma02_space-other_T2w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-fslPrisma02/anat/sub-fslPrisma02_space-other_T2w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:17" + "Date": "2022-10-22 14:36:17", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-fslPrisma03/anat/sub-fslPrisma03_flip-1_mt-on_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-fslPrisma03/anat/sub-fslPrisma03_flip-1_mt-on_space-other_MTS_label-SC_softseg.json index c53db7f5dd..506bbdcda7 100644 --- a/derivatives/labels_softseg/sub-fslPrisma03/anat/sub-fslPrisma03_flip-1_mt-on_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-fslPrisma03/anat/sub-fslPrisma03_flip-1_mt-on_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:17" + "Date": "2022-10-22 14:36:17", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-fslPrisma03/anat/sub-fslPrisma03_flip-2_mt-off_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-fslPrisma03/anat/sub-fslPrisma03_flip-2_mt-off_space-other_MTS_label-SC_softseg.json index c53db7f5dd..506bbdcda7 100644 --- a/derivatives/labels_softseg/sub-fslPrisma03/anat/sub-fslPrisma03_flip-2_mt-off_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-fslPrisma03/anat/sub-fslPrisma03_flip-2_mt-off_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:17" + "Date": "2022-10-22 14:36:17", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-fslPrisma03/anat/sub-fslPrisma03_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-fslPrisma03/anat/sub-fslPrisma03_space-other_T1w_label-SC_softseg.json index c53db7f5dd..34e844bd32 100644 --- a/derivatives/labels_softseg/sub-fslPrisma03/anat/sub-fslPrisma03_space-other_T1w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-fslPrisma03/anat/sub-fslPrisma03_space-other_T1w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:17" + "Date": "2022-10-22 14:36:17", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-fslPrisma03/anat/sub-fslPrisma03_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-fslPrisma03/anat/sub-fslPrisma03_space-other_T2star_label-SC_softseg.json index c53db7f5dd..85ff7f8eab 100644 --- a/derivatives/labels_softseg/sub-fslPrisma03/anat/sub-fslPrisma03_space-other_T2star_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-fslPrisma03/anat/sub-fslPrisma03_space-other_T2star_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:17" + "Date": "2022-10-22 14:36:17", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-fslPrisma03/anat/sub-fslPrisma03_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-fslPrisma03/anat/sub-fslPrisma03_space-other_T2w_label-SC_softseg.json index c53db7f5dd..8d15be0889 100644 --- a/derivatives/labels_softseg/sub-fslPrisma03/anat/sub-fslPrisma03_space-other_T2w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-fslPrisma03/anat/sub-fslPrisma03_space-other_T2w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:17" + "Date": "2022-10-22 14:36:17", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-fslPrisma04/anat/sub-fslPrisma04_flip-1_mt-on_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-fslPrisma04/anat/sub-fslPrisma04_flip-1_mt-on_space-other_MTS_label-SC_softseg.json index c53db7f5dd..506bbdcda7 100644 --- a/derivatives/labels_softseg/sub-fslPrisma04/anat/sub-fslPrisma04_flip-1_mt-on_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-fslPrisma04/anat/sub-fslPrisma04_flip-1_mt-on_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:17" + "Date": "2022-10-22 14:36:17", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-fslPrisma04/anat/sub-fslPrisma04_flip-2_mt-off_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-fslPrisma04/anat/sub-fslPrisma04_flip-2_mt-off_space-other_MTS_label-SC_softseg.json index c53db7f5dd..506bbdcda7 100644 --- a/derivatives/labels_softseg/sub-fslPrisma04/anat/sub-fslPrisma04_flip-2_mt-off_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-fslPrisma04/anat/sub-fslPrisma04_flip-2_mt-off_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:17" + "Date": "2022-10-22 14:36:17", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-fslPrisma04/anat/sub-fslPrisma04_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-fslPrisma04/anat/sub-fslPrisma04_space-other_T1w_label-SC_softseg.json index c53db7f5dd..34e844bd32 100644 --- a/derivatives/labels_softseg/sub-fslPrisma04/anat/sub-fslPrisma04_space-other_T1w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-fslPrisma04/anat/sub-fslPrisma04_space-other_T1w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:17" + "Date": "2022-10-22 14:36:17", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-fslPrisma04/anat/sub-fslPrisma04_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-fslPrisma04/anat/sub-fslPrisma04_space-other_T2star_label-SC_softseg.json index 6424c14179..b9bf6dfac2 100644 --- a/derivatives/labels_softseg/sub-fslPrisma04/anat/sub-fslPrisma04_space-other_T2star_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-fslPrisma04/anat/sub-fslPrisma04_space-other_T2star_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:18" + "Date": "2022-10-22 14:36:18", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-fslPrisma04/anat/sub-fslPrisma04_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-fslPrisma04/anat/sub-fslPrisma04_space-other_T2w_label-SC_softseg.json index 6424c14179..b521d7f189 100644 --- a/derivatives/labels_softseg/sub-fslPrisma04/anat/sub-fslPrisma04_space-other_T2w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-fslPrisma04/anat/sub-fslPrisma04_space-other_T2w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:18" + "Date": "2022-10-22 14:36:18", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-fslPrisma05/anat/sub-fslPrisma05_flip-1_mt-on_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-fslPrisma05/anat/sub-fslPrisma05_flip-1_mt-on_space-other_MTS_label-SC_softseg.json index 6424c14179..33c9f460b2 100644 --- a/derivatives/labels_softseg/sub-fslPrisma05/anat/sub-fslPrisma05_flip-1_mt-on_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-fslPrisma05/anat/sub-fslPrisma05_flip-1_mt-on_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:18" + "Date": "2022-10-22 14:36:18", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-fslPrisma05/anat/sub-fslPrisma05_flip-2_mt-off_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-fslPrisma05/anat/sub-fslPrisma05_flip-2_mt-off_space-other_MTS_label-SC_softseg.json index 6424c14179..33c9f460b2 100644 --- a/derivatives/labels_softseg/sub-fslPrisma05/anat/sub-fslPrisma05_flip-2_mt-off_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-fslPrisma05/anat/sub-fslPrisma05_flip-2_mt-off_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:18" + "Date": "2022-10-22 14:36:18", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-fslPrisma05/anat/sub-fslPrisma05_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-fslPrisma05/anat/sub-fslPrisma05_space-other_T1w_label-SC_softseg.json index 6424c14179..e597ead11c 100644 --- a/derivatives/labels_softseg/sub-fslPrisma05/anat/sub-fslPrisma05_space-other_T1w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-fslPrisma05/anat/sub-fslPrisma05_space-other_T1w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:18" + "Date": "2022-10-22 14:36:18", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-fslPrisma05/anat/sub-fslPrisma05_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-fslPrisma05/anat/sub-fslPrisma05_space-other_T2star_label-SC_softseg.json index 6424c14179..b9bf6dfac2 100644 --- a/derivatives/labels_softseg/sub-fslPrisma05/anat/sub-fslPrisma05_space-other_T2star_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-fslPrisma05/anat/sub-fslPrisma05_space-other_T2star_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:18" + "Date": "2022-10-22 14:36:18", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-fslPrisma05/anat/sub-fslPrisma05_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-fslPrisma05/anat/sub-fslPrisma05_space-other_T2w_label-SC_softseg.json index 6424c14179..b521d7f189 100644 --- a/derivatives/labels_softseg/sub-fslPrisma05/anat/sub-fslPrisma05_space-other_T2w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-fslPrisma05/anat/sub-fslPrisma05_space-other_T2w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:18" + "Date": "2022-10-22 14:36:18", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-fslPrisma06/anat/sub-fslPrisma06_flip-1_mt-on_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-fslPrisma06/anat/sub-fslPrisma06_flip-1_mt-on_space-other_MTS_label-SC_softseg.json index 6424c14179..33c9f460b2 100644 --- a/derivatives/labels_softseg/sub-fslPrisma06/anat/sub-fslPrisma06_flip-1_mt-on_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-fslPrisma06/anat/sub-fslPrisma06_flip-1_mt-on_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:18" + "Date": "2022-10-22 14:36:18", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-fslPrisma06/anat/sub-fslPrisma06_flip-2_mt-off_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-fslPrisma06/anat/sub-fslPrisma06_flip-2_mt-off_space-other_MTS_label-SC_softseg.json index 6424c14179..33c9f460b2 100644 --- a/derivatives/labels_softseg/sub-fslPrisma06/anat/sub-fslPrisma06_flip-2_mt-off_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-fslPrisma06/anat/sub-fslPrisma06_flip-2_mt-off_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:18" + "Date": "2022-10-22 14:36:18", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-fslPrisma06/anat/sub-fslPrisma06_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-fslPrisma06/anat/sub-fslPrisma06_space-other_T1w_label-SC_softseg.json index 6424c14179..e597ead11c 100644 --- a/derivatives/labels_softseg/sub-fslPrisma06/anat/sub-fslPrisma06_space-other_T1w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-fslPrisma06/anat/sub-fslPrisma06_space-other_T1w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:18" + "Date": "2022-10-22 14:36:18", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-fslPrisma06/anat/sub-fslPrisma06_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-fslPrisma06/anat/sub-fslPrisma06_space-other_T2star_label-SC_softseg.json index 6424c14179..b9bf6dfac2 100644 --- a/derivatives/labels_softseg/sub-fslPrisma06/anat/sub-fslPrisma06_space-other_T2star_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-fslPrisma06/anat/sub-fslPrisma06_space-other_T2star_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:18" + "Date": "2022-10-22 14:36:18", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-fslPrisma06/anat/sub-fslPrisma06_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-fslPrisma06/anat/sub-fslPrisma06_space-other_T2w_label-SC_softseg.json index 6424c14179..b521d7f189 100644 --- a/derivatives/labels_softseg/sub-fslPrisma06/anat/sub-fslPrisma06_space-other_T2w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-fslPrisma06/anat/sub-fslPrisma06_space-other_T2w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:18" + "Date": "2022-10-22 14:36:18", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-geneva01/anat/sub-geneva01_flip-1_mt-on_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-geneva01/anat/sub-geneva01_flip-1_mt-on_space-other_MTS_label-SC_softseg.json index 6424c14179..33c9f460b2 100644 --- a/derivatives/labels_softseg/sub-geneva01/anat/sub-geneva01_flip-1_mt-on_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-geneva01/anat/sub-geneva01_flip-1_mt-on_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:18" + "Date": "2022-10-22 14:36:18", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-geneva01/anat/sub-geneva01_flip-2_mt-off_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-geneva01/anat/sub-geneva01_flip-2_mt-off_space-other_MTS_label-SC_softseg.json index 6424c14179..33c9f460b2 100644 --- a/derivatives/labels_softseg/sub-geneva01/anat/sub-geneva01_flip-2_mt-off_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-geneva01/anat/sub-geneva01_flip-2_mt-off_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:18" + "Date": "2022-10-22 14:36:18", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-geneva01/anat/sub-geneva01_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-geneva01/anat/sub-geneva01_space-other_T1w_label-SC_softseg.json index 6424c14179..e597ead11c 100644 --- a/derivatives/labels_softseg/sub-geneva01/anat/sub-geneva01_space-other_T1w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-geneva01/anat/sub-geneva01_space-other_T1w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:18" + "Date": "2022-10-22 14:36:18", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-geneva01/anat/sub-geneva01_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-geneva01/anat/sub-geneva01_space-other_T2star_label-SC_softseg.json index 6424c14179..b9bf6dfac2 100644 --- a/derivatives/labels_softseg/sub-geneva01/anat/sub-geneva01_space-other_T2star_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-geneva01/anat/sub-geneva01_space-other_T2star_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:18" + "Date": "2022-10-22 14:36:18", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-geneva01/anat/sub-geneva01_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-geneva01/anat/sub-geneva01_space-other_T2w_label-SC_softseg.json index 6424c14179..b521d7f189 100644 --- a/derivatives/labels_softseg/sub-geneva01/anat/sub-geneva01_space-other_T2w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-geneva01/anat/sub-geneva01_space-other_T2w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:18" + "Date": "2022-10-22 14:36:18", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-geneva02/anat/sub-geneva02_flip-1_mt-on_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-geneva02/anat/sub-geneva02_flip-1_mt-on_space-other_MTS_label-SC_softseg.json index 6424c14179..33c9f460b2 100644 --- a/derivatives/labels_softseg/sub-geneva02/anat/sub-geneva02_flip-1_mt-on_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-geneva02/anat/sub-geneva02_flip-1_mt-on_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:18" + "Date": "2022-10-22 14:36:18", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-geneva02/anat/sub-geneva02_flip-2_mt-off_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-geneva02/anat/sub-geneva02_flip-2_mt-off_space-other_MTS_label-SC_softseg.json index 6424c14179..33c9f460b2 100644 --- a/derivatives/labels_softseg/sub-geneva02/anat/sub-geneva02_flip-2_mt-off_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-geneva02/anat/sub-geneva02_flip-2_mt-off_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:18" + "Date": "2022-10-22 14:36:18", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-geneva02/anat/sub-geneva02_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-geneva02/anat/sub-geneva02_space-other_T1w_label-SC_softseg.json index 0342cc4364..bac062ea43 100644 --- a/derivatives/labels_softseg/sub-geneva02/anat/sub-geneva02_space-other_T1w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-geneva02/anat/sub-geneva02_space-other_T1w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:19" + "Date": "2022-10-22 14:36:19", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-geneva02/anat/sub-geneva02_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-geneva02/anat/sub-geneva02_space-other_T2star_label-SC_softseg.json index 0342cc4364..a318198c78 100644 --- a/derivatives/labels_softseg/sub-geneva02/anat/sub-geneva02_space-other_T2star_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-geneva02/anat/sub-geneva02_space-other_T2star_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:19" + "Date": "2022-10-22 14:36:19", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-geneva02/anat/sub-geneva02_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-geneva02/anat/sub-geneva02_space-other_T2w_label-SC_softseg.json index 0342cc4364..7e28c4cda8 100644 --- a/derivatives/labels_softseg/sub-geneva02/anat/sub-geneva02_space-other_T2w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-geneva02/anat/sub-geneva02_space-other_T2w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:19" + "Date": "2022-10-22 14:36:19", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-geneva03/anat/sub-geneva03_flip-1_mt-on_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-geneva03/anat/sub-geneva03_flip-1_mt-on_space-other_MTS_label-SC_softseg.json index 0342cc4364..a74875a7d8 100644 --- a/derivatives/labels_softseg/sub-geneva03/anat/sub-geneva03_flip-1_mt-on_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-geneva03/anat/sub-geneva03_flip-1_mt-on_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:19" + "Date": "2022-10-22 14:36:19", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-geneva03/anat/sub-geneva03_flip-2_mt-off_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-geneva03/anat/sub-geneva03_flip-2_mt-off_space-other_MTS_label-SC_softseg.json index 0342cc4364..a74875a7d8 100644 --- a/derivatives/labels_softseg/sub-geneva03/anat/sub-geneva03_flip-2_mt-off_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-geneva03/anat/sub-geneva03_flip-2_mt-off_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:19" + "Date": "2022-10-22 14:36:19", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-geneva03/anat/sub-geneva03_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-geneva03/anat/sub-geneva03_space-other_T1w_label-SC_softseg.json index 0342cc4364..bac062ea43 100644 --- a/derivatives/labels_softseg/sub-geneva03/anat/sub-geneva03_space-other_T1w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-geneva03/anat/sub-geneva03_space-other_T1w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:19" + "Date": "2022-10-22 14:36:19", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-geneva03/anat/sub-geneva03_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-geneva03/anat/sub-geneva03_space-other_T2star_label-SC_softseg.json index 0342cc4364..a318198c78 100644 --- a/derivatives/labels_softseg/sub-geneva03/anat/sub-geneva03_space-other_T2star_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-geneva03/anat/sub-geneva03_space-other_T2star_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:19" + "Date": "2022-10-22 14:36:19", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-geneva03/anat/sub-geneva03_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-geneva03/anat/sub-geneva03_space-other_T2w_label-SC_softseg.json index 0342cc4364..7e28c4cda8 100644 --- a/derivatives/labels_softseg/sub-geneva03/anat/sub-geneva03_space-other_T2w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-geneva03/anat/sub-geneva03_space-other_T2w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:19" + "Date": "2022-10-22 14:36:19", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-geneva04/anat/sub-geneva04_flip-1_mt-on_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-geneva04/anat/sub-geneva04_flip-1_mt-on_space-other_MTS_label-SC_softseg.json index 0342cc4364..a74875a7d8 100644 --- a/derivatives/labels_softseg/sub-geneva04/anat/sub-geneva04_flip-1_mt-on_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-geneva04/anat/sub-geneva04_flip-1_mt-on_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:19" + "Date": "2022-10-22 14:36:19", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-geneva04/anat/sub-geneva04_flip-2_mt-off_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-geneva04/anat/sub-geneva04_flip-2_mt-off_space-other_MTS_label-SC_softseg.json index 0342cc4364..a74875a7d8 100644 --- a/derivatives/labels_softseg/sub-geneva04/anat/sub-geneva04_flip-2_mt-off_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-geneva04/anat/sub-geneva04_flip-2_mt-off_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:19" + "Date": "2022-10-22 14:36:19", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-geneva04/anat/sub-geneva04_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-geneva04/anat/sub-geneva04_space-other_T1w_label-SC_softseg.json index 0342cc4364..bac062ea43 100644 --- a/derivatives/labels_softseg/sub-geneva04/anat/sub-geneva04_space-other_T1w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-geneva04/anat/sub-geneva04_space-other_T1w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:19" + "Date": "2022-10-22 14:36:19", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-geneva04/anat/sub-geneva04_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-geneva04/anat/sub-geneva04_space-other_T2star_label-SC_softseg.json index 0342cc4364..a318198c78 100644 --- a/derivatives/labels_softseg/sub-geneva04/anat/sub-geneva04_space-other_T2star_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-geneva04/anat/sub-geneva04_space-other_T2star_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:19" + "Date": "2022-10-22 14:36:19", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-geneva04/anat/sub-geneva04_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-geneva04/anat/sub-geneva04_space-other_T2w_label-SC_softseg.json index 0342cc4364..7e28c4cda8 100644 --- a/derivatives/labels_softseg/sub-geneva04/anat/sub-geneva04_space-other_T2w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-geneva04/anat/sub-geneva04_space-other_T2w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:19" + "Date": "2022-10-22 14:36:19", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-geneva05/anat/sub-geneva05_flip-1_mt-on_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-geneva05/anat/sub-geneva05_flip-1_mt-on_space-other_MTS_label-SC_softseg.json index 0342cc4364..a74875a7d8 100644 --- a/derivatives/labels_softseg/sub-geneva05/anat/sub-geneva05_flip-1_mt-on_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-geneva05/anat/sub-geneva05_flip-1_mt-on_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:19" + "Date": "2022-10-22 14:36:19", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-geneva05/anat/sub-geneva05_flip-2_mt-off_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-geneva05/anat/sub-geneva05_flip-2_mt-off_space-other_MTS_label-SC_softseg.json index 0342cc4364..a74875a7d8 100644 --- a/derivatives/labels_softseg/sub-geneva05/anat/sub-geneva05_flip-2_mt-off_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-geneva05/anat/sub-geneva05_flip-2_mt-off_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:19" + "Date": "2022-10-22 14:36:19", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-geneva05/anat/sub-geneva05_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-geneva05/anat/sub-geneva05_space-other_T1w_label-SC_softseg.json index 0342cc4364..bac062ea43 100644 --- a/derivatives/labels_softseg/sub-geneva05/anat/sub-geneva05_space-other_T1w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-geneva05/anat/sub-geneva05_space-other_T1w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:19" + "Date": "2022-10-22 14:36:19", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-geneva05/anat/sub-geneva05_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-geneva05/anat/sub-geneva05_space-other_T2star_label-SC_softseg.json index 0342cc4364..a318198c78 100644 --- a/derivatives/labels_softseg/sub-geneva05/anat/sub-geneva05_space-other_T2star_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-geneva05/anat/sub-geneva05_space-other_T2star_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:19" + "Date": "2022-10-22 14:36:19", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-geneva05/anat/sub-geneva05_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-geneva05/anat/sub-geneva05_space-other_T2w_label-SC_softseg.json index 0342cc4364..7e28c4cda8 100644 --- a/derivatives/labels_softseg/sub-geneva05/anat/sub-geneva05_space-other_T2w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-geneva05/anat/sub-geneva05_space-other_T2w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:19" + "Date": "2022-10-22 14:36:19", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-geneva06/anat/sub-geneva06_flip-1_mt-on_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-geneva06/anat/sub-geneva06_flip-1_mt-on_space-other_MTS_label-SC_softseg.json index 7427cbcb5a..336a638137 100644 --- a/derivatives/labels_softseg/sub-geneva06/anat/sub-geneva06_flip-1_mt-on_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-geneva06/anat/sub-geneva06_flip-1_mt-on_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:20" + "Date": "2022-10-22 14:36:20", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-geneva06/anat/sub-geneva06_flip-2_mt-off_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-geneva06/anat/sub-geneva06_flip-2_mt-off_space-other_MTS_label-SC_softseg.json index 7427cbcb5a..336a638137 100644 --- a/derivatives/labels_softseg/sub-geneva06/anat/sub-geneva06_flip-2_mt-off_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-geneva06/anat/sub-geneva06_flip-2_mt-off_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:20" + "Date": "2022-10-22 14:36:20", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-geneva06/anat/sub-geneva06_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-geneva06/anat/sub-geneva06_space-other_T1w_label-SC_softseg.json index 7427cbcb5a..bdcc7d2c78 100644 --- a/derivatives/labels_softseg/sub-geneva06/anat/sub-geneva06_space-other_T1w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-geneva06/anat/sub-geneva06_space-other_T1w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:20" + "Date": "2022-10-22 14:36:20", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-geneva06/anat/sub-geneva06_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-geneva06/anat/sub-geneva06_space-other_T2star_label-SC_softseg.json index 7427cbcb5a..87f239f56d 100644 --- a/derivatives/labels_softseg/sub-geneva06/anat/sub-geneva06_space-other_T2star_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-geneva06/anat/sub-geneva06_space-other_T2star_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:20" + "Date": "2022-10-22 14:36:20", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-geneva06/anat/sub-geneva06_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-geneva06/anat/sub-geneva06_space-other_T2w_label-SC_softseg.json index 7427cbcb5a..468fcc1c83 100644 --- a/derivatives/labels_softseg/sub-geneva06/anat/sub-geneva06_space-other_T2w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-geneva06/anat/sub-geneva06_space-other_T2w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:20" + "Date": "2022-10-22 14:36:20", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-hamburg01/anat/sub-hamburg01_flip-1_mt-on_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-hamburg01/anat/sub-hamburg01_flip-1_mt-on_space-other_MTS_label-SC_softseg.json index 7427cbcb5a..336a638137 100644 --- a/derivatives/labels_softseg/sub-hamburg01/anat/sub-hamburg01_flip-1_mt-on_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-hamburg01/anat/sub-hamburg01_flip-1_mt-on_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:20" + "Date": "2022-10-22 14:36:20", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-hamburg01/anat/sub-hamburg01_flip-2_mt-off_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-hamburg01/anat/sub-hamburg01_flip-2_mt-off_space-other_MTS_label-SC_softseg.json index 7427cbcb5a..336a638137 100644 --- a/derivatives/labels_softseg/sub-hamburg01/anat/sub-hamburg01_flip-2_mt-off_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-hamburg01/anat/sub-hamburg01_flip-2_mt-off_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:20" + "Date": "2022-10-22 14:36:20", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-hamburg01/anat/sub-hamburg01_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-hamburg01/anat/sub-hamburg01_space-other_T1w_label-SC_softseg.json index 7427cbcb5a..bdcc7d2c78 100644 --- a/derivatives/labels_softseg/sub-hamburg01/anat/sub-hamburg01_space-other_T1w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-hamburg01/anat/sub-hamburg01_space-other_T1w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:20" + "Date": "2022-10-22 14:36:20", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-hamburg01/anat/sub-hamburg01_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-hamburg01/anat/sub-hamburg01_space-other_T2star_label-SC_softseg.json index 7427cbcb5a..87f239f56d 100644 --- a/derivatives/labels_softseg/sub-hamburg01/anat/sub-hamburg01_space-other_T2star_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-hamburg01/anat/sub-hamburg01_space-other_T2star_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:20" + "Date": "2022-10-22 14:36:20", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-hamburg01/anat/sub-hamburg01_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-hamburg01/anat/sub-hamburg01_space-other_T2w_label-SC_softseg.json index 7427cbcb5a..468fcc1c83 100644 --- a/derivatives/labels_softseg/sub-hamburg01/anat/sub-hamburg01_space-other_T2w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-hamburg01/anat/sub-hamburg01_space-other_T2w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:20" + "Date": "2022-10-22 14:36:20", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-hamburg02/anat/sub-hamburg02_flip-1_mt-on_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-hamburg02/anat/sub-hamburg02_flip-1_mt-on_space-other_MTS_label-SC_softseg.json index 7427cbcb5a..336a638137 100644 --- a/derivatives/labels_softseg/sub-hamburg02/anat/sub-hamburg02_flip-1_mt-on_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-hamburg02/anat/sub-hamburg02_flip-1_mt-on_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:20" + "Date": "2022-10-22 14:36:20", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-hamburg02/anat/sub-hamburg02_flip-2_mt-off_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-hamburg02/anat/sub-hamburg02_flip-2_mt-off_space-other_MTS_label-SC_softseg.json index 7427cbcb5a..336a638137 100644 --- a/derivatives/labels_softseg/sub-hamburg02/anat/sub-hamburg02_flip-2_mt-off_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-hamburg02/anat/sub-hamburg02_flip-2_mt-off_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:20" + "Date": "2022-10-22 14:36:20", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-hamburg02/anat/sub-hamburg02_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-hamburg02/anat/sub-hamburg02_space-other_T1w_label-SC_softseg.json index 7427cbcb5a..bdcc7d2c78 100644 --- a/derivatives/labels_softseg/sub-hamburg02/anat/sub-hamburg02_space-other_T1w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-hamburg02/anat/sub-hamburg02_space-other_T1w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:20" + "Date": "2022-10-22 14:36:20", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-hamburg02/anat/sub-hamburg02_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-hamburg02/anat/sub-hamburg02_space-other_T2star_label-SC_softseg.json index 7427cbcb5a..87f239f56d 100644 --- a/derivatives/labels_softseg/sub-hamburg02/anat/sub-hamburg02_space-other_T2star_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-hamburg02/anat/sub-hamburg02_space-other_T2star_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:20" + "Date": "2022-10-22 14:36:20", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-hamburg02/anat/sub-hamburg02_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-hamburg02/anat/sub-hamburg02_space-other_T2w_label-SC_softseg.json index 7427cbcb5a..468fcc1c83 100644 --- a/derivatives/labels_softseg/sub-hamburg02/anat/sub-hamburg02_space-other_T2w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-hamburg02/anat/sub-hamburg02_space-other_T2w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:20" + "Date": "2022-10-22 14:36:20", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-hamburg03/anat/sub-hamburg03_flip-1_mt-on_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-hamburg03/anat/sub-hamburg03_flip-1_mt-on_space-other_MTS_label-SC_softseg.json index 7427cbcb5a..336a638137 100644 --- a/derivatives/labels_softseg/sub-hamburg03/anat/sub-hamburg03_flip-1_mt-on_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-hamburg03/anat/sub-hamburg03_flip-1_mt-on_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:20" + "Date": "2022-10-22 14:36:20", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-hamburg03/anat/sub-hamburg03_flip-2_mt-off_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-hamburg03/anat/sub-hamburg03_flip-2_mt-off_space-other_MTS_label-SC_softseg.json index 7427cbcb5a..336a638137 100644 --- a/derivatives/labels_softseg/sub-hamburg03/anat/sub-hamburg03_flip-2_mt-off_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-hamburg03/anat/sub-hamburg03_flip-2_mt-off_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:20" + "Date": "2022-10-22 14:36:20", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-hamburg03/anat/sub-hamburg03_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-hamburg03/anat/sub-hamburg03_space-other_T1w_label-SC_softseg.json index 7427cbcb5a..bdcc7d2c78 100644 --- a/derivatives/labels_softseg/sub-hamburg03/anat/sub-hamburg03_space-other_T1w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-hamburg03/anat/sub-hamburg03_space-other_T1w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:20" + "Date": "2022-10-22 14:36:20", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-hamburg03/anat/sub-hamburg03_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-hamburg03/anat/sub-hamburg03_space-other_T2star_label-SC_softseg.json index 7427cbcb5a..87f239f56d 100644 --- a/derivatives/labels_softseg/sub-hamburg03/anat/sub-hamburg03_space-other_T2star_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-hamburg03/anat/sub-hamburg03_space-other_T2star_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:20" + "Date": "2022-10-22 14:36:20", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-hamburg03/anat/sub-hamburg03_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-hamburg03/anat/sub-hamburg03_space-other_T2w_label-SC_softseg.json index 7427cbcb5a..468fcc1c83 100644 --- a/derivatives/labels_softseg/sub-hamburg03/anat/sub-hamburg03_space-other_T2w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-hamburg03/anat/sub-hamburg03_space-other_T2w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:20" + "Date": "2022-10-22 14:36:20", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-hamburg04/anat/sub-hamburg04_flip-1_mt-on_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-hamburg04/anat/sub-hamburg04_flip-1_mt-on_space-other_MTS_label-SC_softseg.json index 6b43fe629f..973c483448 100644 --- a/derivatives/labels_softseg/sub-hamburg04/anat/sub-hamburg04_flip-1_mt-on_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-hamburg04/anat/sub-hamburg04_flip-1_mt-on_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:21" + "Date": "2022-10-22 14:36:21", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-hamburg04/anat/sub-hamburg04_flip-2_mt-off_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-hamburg04/anat/sub-hamburg04_flip-2_mt-off_space-other_MTS_label-SC_softseg.json index 6b43fe629f..973c483448 100644 --- a/derivatives/labels_softseg/sub-hamburg04/anat/sub-hamburg04_flip-2_mt-off_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-hamburg04/anat/sub-hamburg04_flip-2_mt-off_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:21" + "Date": "2022-10-22 14:36:21", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-hamburg04/anat/sub-hamburg04_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-hamburg04/anat/sub-hamburg04_space-other_T1w_label-SC_softseg.json index 6b43fe629f..a67d44072c 100644 --- a/derivatives/labels_softseg/sub-hamburg04/anat/sub-hamburg04_space-other_T1w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-hamburg04/anat/sub-hamburg04_space-other_T1w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:21" + "Date": "2022-10-22 14:36:21", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-hamburg04/anat/sub-hamburg04_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-hamburg04/anat/sub-hamburg04_space-other_T2star_label-SC_softseg.json index 6b43fe629f..b38b9e0a7e 100644 --- a/derivatives/labels_softseg/sub-hamburg04/anat/sub-hamburg04_space-other_T2star_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-hamburg04/anat/sub-hamburg04_space-other_T2star_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:21" + "Date": "2022-10-22 14:36:21", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-hamburg04/anat/sub-hamburg04_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-hamburg04/anat/sub-hamburg04_space-other_T2w_label-SC_softseg.json index 6b43fe629f..39b861438c 100644 --- a/derivatives/labels_softseg/sub-hamburg04/anat/sub-hamburg04_space-other_T2w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-hamburg04/anat/sub-hamburg04_space-other_T2w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:21" + "Date": "2022-10-22 14:36:21", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-hamburg05/anat/sub-hamburg05_flip-1_mt-on_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-hamburg05/anat/sub-hamburg05_flip-1_mt-on_space-other_MTS_label-SC_softseg.json index 6b43fe629f..973c483448 100644 --- a/derivatives/labels_softseg/sub-hamburg05/anat/sub-hamburg05_flip-1_mt-on_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-hamburg05/anat/sub-hamburg05_flip-1_mt-on_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:21" + "Date": "2022-10-22 14:36:21", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-hamburg05/anat/sub-hamburg05_flip-2_mt-off_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-hamburg05/anat/sub-hamburg05_flip-2_mt-off_space-other_MTS_label-SC_softseg.json index 6b43fe629f..973c483448 100644 --- a/derivatives/labels_softseg/sub-hamburg05/anat/sub-hamburg05_flip-2_mt-off_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-hamburg05/anat/sub-hamburg05_flip-2_mt-off_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:21" + "Date": "2022-10-22 14:36:21", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-hamburg05/anat/sub-hamburg05_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-hamburg05/anat/sub-hamburg05_space-other_T1w_label-SC_softseg.json index 6b43fe629f..a67d44072c 100644 --- a/derivatives/labels_softseg/sub-hamburg05/anat/sub-hamburg05_space-other_T1w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-hamburg05/anat/sub-hamburg05_space-other_T1w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:21" + "Date": "2022-10-22 14:36:21", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-hamburg05/anat/sub-hamburg05_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-hamburg05/anat/sub-hamburg05_space-other_T2star_label-SC_softseg.json index 6b43fe629f..b38b9e0a7e 100644 --- a/derivatives/labels_softseg/sub-hamburg05/anat/sub-hamburg05_space-other_T2star_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-hamburg05/anat/sub-hamburg05_space-other_T2star_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:21" + "Date": "2022-10-22 14:36:21", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-hamburg05/anat/sub-hamburg05_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-hamburg05/anat/sub-hamburg05_space-other_T2w_label-SC_softseg.json index 6b43fe629f..39b861438c 100644 --- a/derivatives/labels_softseg/sub-hamburg05/anat/sub-hamburg05_space-other_T2w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-hamburg05/anat/sub-hamburg05_space-other_T2w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:21" + "Date": "2022-10-22 14:36:21", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-hamburg06/anat/sub-hamburg06_flip-1_mt-on_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-hamburg06/anat/sub-hamburg06_flip-1_mt-on_space-other_MTS_label-SC_softseg.json index 6b43fe629f..973c483448 100644 --- a/derivatives/labels_softseg/sub-hamburg06/anat/sub-hamburg06_flip-1_mt-on_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-hamburg06/anat/sub-hamburg06_flip-1_mt-on_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:21" + "Date": "2022-10-22 14:36:21", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-hamburg06/anat/sub-hamburg06_flip-2_mt-off_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-hamburg06/anat/sub-hamburg06_flip-2_mt-off_space-other_MTS_label-SC_softseg.json index 6b43fe629f..973c483448 100644 --- a/derivatives/labels_softseg/sub-hamburg06/anat/sub-hamburg06_flip-2_mt-off_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-hamburg06/anat/sub-hamburg06_flip-2_mt-off_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:21" + "Date": "2022-10-22 14:36:21", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-hamburg06/anat/sub-hamburg06_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-hamburg06/anat/sub-hamburg06_space-other_T1w_label-SC_softseg.json index 6b43fe629f..a67d44072c 100644 --- a/derivatives/labels_softseg/sub-hamburg06/anat/sub-hamburg06_space-other_T1w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-hamburg06/anat/sub-hamburg06_space-other_T1w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:21" + "Date": "2022-10-22 14:36:21", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-hamburg06/anat/sub-hamburg06_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-hamburg06/anat/sub-hamburg06_space-other_T2star_label-SC_softseg.json index 6b43fe629f..b38b9e0a7e 100644 --- a/derivatives/labels_softseg/sub-hamburg06/anat/sub-hamburg06_space-other_T2star_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-hamburg06/anat/sub-hamburg06_space-other_T2star_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:21" + "Date": "2022-10-22 14:36:21", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-hamburg06/anat/sub-hamburg06_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-hamburg06/anat/sub-hamburg06_space-other_T2w_label-SC_softseg.json index 6b43fe629f..39b861438c 100644 --- a/derivatives/labels_softseg/sub-hamburg06/anat/sub-hamburg06_space-other_T2w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-hamburg06/anat/sub-hamburg06_space-other_T2w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:21" + "Date": "2022-10-22 14:36:21", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-juntendo750w01/anat/sub-juntendo750w01_flip-1_mt-on_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-juntendo750w01/anat/sub-juntendo750w01_flip-1_mt-on_space-other_MTS_label-SC_softseg.json index 6b43fe629f..973c483448 100644 --- a/derivatives/labels_softseg/sub-juntendo750w01/anat/sub-juntendo750w01_flip-1_mt-on_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-juntendo750w01/anat/sub-juntendo750w01_flip-1_mt-on_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:21" + "Date": "2022-10-22 14:36:21", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-juntendo750w01/anat/sub-juntendo750w01_flip-2_mt-off_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-juntendo750w01/anat/sub-juntendo750w01_flip-2_mt-off_space-other_MTS_label-SC_softseg.json index 6b43fe629f..973c483448 100644 --- a/derivatives/labels_softseg/sub-juntendo750w01/anat/sub-juntendo750w01_flip-2_mt-off_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-juntendo750w01/anat/sub-juntendo750w01_flip-2_mt-off_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:21" + "Date": "2022-10-22 14:36:21", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-juntendo750w01/anat/sub-juntendo750w01_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-juntendo750w01/anat/sub-juntendo750w01_space-other_T1w_label-SC_softseg.json index 6b43fe629f..a67d44072c 100644 --- a/derivatives/labels_softseg/sub-juntendo750w01/anat/sub-juntendo750w01_space-other_T1w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-juntendo750w01/anat/sub-juntendo750w01_space-other_T1w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:21" + "Date": "2022-10-22 14:36:21", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-juntendo750w01/anat/sub-juntendo750w01_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-juntendo750w01/anat/sub-juntendo750w01_space-other_T2star_label-SC_softseg.json index 6b43fe629f..b38b9e0a7e 100644 --- a/derivatives/labels_softseg/sub-juntendo750w01/anat/sub-juntendo750w01_space-other_T2star_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-juntendo750w01/anat/sub-juntendo750w01_space-other_T2star_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:21" + "Date": "2022-10-22 14:36:21", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-juntendo750w01/anat/sub-juntendo750w01_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-juntendo750w01/anat/sub-juntendo750w01_space-other_T2w_label-SC_softseg.json index 6b43fe629f..39b861438c 100644 --- a/derivatives/labels_softseg/sub-juntendo750w01/anat/sub-juntendo750w01_space-other_T2w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-juntendo750w01/anat/sub-juntendo750w01_space-other_T2w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:21" + "Date": "2022-10-22 14:36:21", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-juntendo750w02/anat/sub-juntendo750w02_flip-1_mt-on_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-juntendo750w02/anat/sub-juntendo750w02_flip-1_mt-on_space-other_MTS_label-SC_softseg.json index c05b2a0b2d..03208c6e1d 100644 --- a/derivatives/labels_softseg/sub-juntendo750w02/anat/sub-juntendo750w02_flip-1_mt-on_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-juntendo750w02/anat/sub-juntendo750w02_flip-1_mt-on_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:22" + "Date": "2022-10-22 14:36:22", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-juntendo750w02/anat/sub-juntendo750w02_flip-2_mt-off_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-juntendo750w02/anat/sub-juntendo750w02_flip-2_mt-off_space-other_MTS_label-SC_softseg.json index c05b2a0b2d..03208c6e1d 100644 --- a/derivatives/labels_softseg/sub-juntendo750w02/anat/sub-juntendo750w02_flip-2_mt-off_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-juntendo750w02/anat/sub-juntendo750w02_flip-2_mt-off_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:22" + "Date": "2022-10-22 14:36:22", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-juntendo750w02/anat/sub-juntendo750w02_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-juntendo750w02/anat/sub-juntendo750w02_space-other_T1w_label-SC_softseg.json index c05b2a0b2d..397c5f402f 100644 --- a/derivatives/labels_softseg/sub-juntendo750w02/anat/sub-juntendo750w02_space-other_T1w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-juntendo750w02/anat/sub-juntendo750w02_space-other_T1w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:22" + "Date": "2022-10-22 14:36:22", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-juntendo750w02/anat/sub-juntendo750w02_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-juntendo750w02/anat/sub-juntendo750w02_space-other_T2star_label-SC_softseg.json index c05b2a0b2d..072854c2e7 100644 --- a/derivatives/labels_softseg/sub-juntendo750w02/anat/sub-juntendo750w02_space-other_T2star_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-juntendo750w02/anat/sub-juntendo750w02_space-other_T2star_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:22" + "Date": "2022-10-22 14:36:22", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-juntendo750w02/anat/sub-juntendo750w02_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-juntendo750w02/anat/sub-juntendo750w02_space-other_T2w_label-SC_softseg.json index c05b2a0b2d..6af37c5def 100644 --- a/derivatives/labels_softseg/sub-juntendo750w02/anat/sub-juntendo750w02_space-other_T2w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-juntendo750w02/anat/sub-juntendo750w02_space-other_T2w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:22" + "Date": "2022-10-22 14:36:22", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-juntendo750w03/anat/sub-juntendo750w03_flip-1_mt-on_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-juntendo750w03/anat/sub-juntendo750w03_flip-1_mt-on_space-other_MTS_label-SC_softseg.json index c05b2a0b2d..03208c6e1d 100644 --- a/derivatives/labels_softseg/sub-juntendo750w03/anat/sub-juntendo750w03_flip-1_mt-on_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-juntendo750w03/anat/sub-juntendo750w03_flip-1_mt-on_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:22" + "Date": "2022-10-22 14:36:22", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-juntendo750w03/anat/sub-juntendo750w03_flip-2_mt-off_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-juntendo750w03/anat/sub-juntendo750w03_flip-2_mt-off_space-other_MTS_label-SC_softseg.json index c05b2a0b2d..03208c6e1d 100644 --- a/derivatives/labels_softseg/sub-juntendo750w03/anat/sub-juntendo750w03_flip-2_mt-off_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-juntendo750w03/anat/sub-juntendo750w03_flip-2_mt-off_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:22" + "Date": "2022-10-22 14:36:22", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-juntendo750w03/anat/sub-juntendo750w03_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-juntendo750w03/anat/sub-juntendo750w03_space-other_T1w_label-SC_softseg.json index c05b2a0b2d..397c5f402f 100644 --- a/derivatives/labels_softseg/sub-juntendo750w03/anat/sub-juntendo750w03_space-other_T1w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-juntendo750w03/anat/sub-juntendo750w03_space-other_T1w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:22" + "Date": "2022-10-22 14:36:22", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-juntendo750w03/anat/sub-juntendo750w03_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-juntendo750w03/anat/sub-juntendo750w03_space-other_T2star_label-SC_softseg.json index c05b2a0b2d..072854c2e7 100644 --- a/derivatives/labels_softseg/sub-juntendo750w03/anat/sub-juntendo750w03_space-other_T2star_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-juntendo750w03/anat/sub-juntendo750w03_space-other_T2star_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:22" + "Date": "2022-10-22 14:36:22", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-juntendo750w03/anat/sub-juntendo750w03_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-juntendo750w03/anat/sub-juntendo750w03_space-other_T2w_label-SC_softseg.json index c05b2a0b2d..6af37c5def 100644 --- a/derivatives/labels_softseg/sub-juntendo750w03/anat/sub-juntendo750w03_space-other_T2w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-juntendo750w03/anat/sub-juntendo750w03_space-other_T2w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:22" + "Date": "2022-10-22 14:36:22", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-juntendo750w04/anat/sub-juntendo750w04_flip-1_mt-on_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-juntendo750w04/anat/sub-juntendo750w04_flip-1_mt-on_space-other_MTS_label-SC_softseg.json index c05b2a0b2d..03208c6e1d 100644 --- a/derivatives/labels_softseg/sub-juntendo750w04/anat/sub-juntendo750w04_flip-1_mt-on_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-juntendo750w04/anat/sub-juntendo750w04_flip-1_mt-on_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:22" + "Date": "2022-10-22 14:36:22", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-juntendo750w04/anat/sub-juntendo750w04_flip-2_mt-off_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-juntendo750w04/anat/sub-juntendo750w04_flip-2_mt-off_space-other_MTS_label-SC_softseg.json index c05b2a0b2d..03208c6e1d 100644 --- a/derivatives/labels_softseg/sub-juntendo750w04/anat/sub-juntendo750w04_flip-2_mt-off_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-juntendo750w04/anat/sub-juntendo750w04_flip-2_mt-off_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:22" + "Date": "2022-10-22 14:36:22", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-juntendo750w04/anat/sub-juntendo750w04_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-juntendo750w04/anat/sub-juntendo750w04_space-other_T1w_label-SC_softseg.json index c05b2a0b2d..397c5f402f 100644 --- a/derivatives/labels_softseg/sub-juntendo750w04/anat/sub-juntendo750w04_space-other_T1w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-juntendo750w04/anat/sub-juntendo750w04_space-other_T1w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:22" + "Date": "2022-10-22 14:36:22", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-juntendo750w04/anat/sub-juntendo750w04_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-juntendo750w04/anat/sub-juntendo750w04_space-other_T2star_label-SC_softseg.json index c05b2a0b2d..072854c2e7 100644 --- a/derivatives/labels_softseg/sub-juntendo750w04/anat/sub-juntendo750w04_space-other_T2star_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-juntendo750w04/anat/sub-juntendo750w04_space-other_T2star_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:22" + "Date": "2022-10-22 14:36:22", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-juntendo750w04/anat/sub-juntendo750w04_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-juntendo750w04/anat/sub-juntendo750w04_space-other_T2w_label-SC_softseg.json index c05b2a0b2d..6af37c5def 100644 --- a/derivatives/labels_softseg/sub-juntendo750w04/anat/sub-juntendo750w04_space-other_T2w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-juntendo750w04/anat/sub-juntendo750w04_space-other_T2w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:22" + "Date": "2022-10-22 14:36:22", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-juntendo750w05/anat/sub-juntendo750w05_flip-1_mt-on_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-juntendo750w05/anat/sub-juntendo750w05_flip-1_mt-on_space-other_MTS_label-SC_softseg.json index c05b2a0b2d..03208c6e1d 100644 --- a/derivatives/labels_softseg/sub-juntendo750w05/anat/sub-juntendo750w05_flip-1_mt-on_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-juntendo750w05/anat/sub-juntendo750w05_flip-1_mt-on_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:22" + "Date": "2022-10-22 14:36:22", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-juntendo750w05/anat/sub-juntendo750w05_flip-2_mt-off_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-juntendo750w05/anat/sub-juntendo750w05_flip-2_mt-off_space-other_MTS_label-SC_softseg.json index c05b2a0b2d..03208c6e1d 100644 --- a/derivatives/labels_softseg/sub-juntendo750w05/anat/sub-juntendo750w05_flip-2_mt-off_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-juntendo750w05/anat/sub-juntendo750w05_flip-2_mt-off_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:22" + "Date": "2022-10-22 14:36:22", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-juntendo750w05/anat/sub-juntendo750w05_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-juntendo750w05/anat/sub-juntendo750w05_space-other_T1w_label-SC_softseg.json index f2a78131a0..a96fd50dfb 100644 --- a/derivatives/labels_softseg/sub-juntendo750w05/anat/sub-juntendo750w05_space-other_T1w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-juntendo750w05/anat/sub-juntendo750w05_space-other_T1w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:23" + "Date": "2022-10-22 14:36:23", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-juntendo750w05/anat/sub-juntendo750w05_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-juntendo750w05/anat/sub-juntendo750w05_space-other_T2star_label-SC_softseg.json index f2a78131a0..9343f7d35f 100644 --- a/derivatives/labels_softseg/sub-juntendo750w05/anat/sub-juntendo750w05_space-other_T2star_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-juntendo750w05/anat/sub-juntendo750w05_space-other_T2star_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:23" + "Date": "2022-10-22 14:36:23", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-juntendo750w05/anat/sub-juntendo750w05_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-juntendo750w05/anat/sub-juntendo750w05_space-other_T2w_label-SC_softseg.json index f2a78131a0..d76d7b5832 100644 --- a/derivatives/labels_softseg/sub-juntendo750w05/anat/sub-juntendo750w05_space-other_T2w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-juntendo750w05/anat/sub-juntendo750w05_space-other_T2w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:23" + "Date": "2022-10-22 14:36:23", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-juntendo750w06/anat/sub-juntendo750w06_flip-1_mt-on_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-juntendo750w06/anat/sub-juntendo750w06_flip-1_mt-on_space-other_MTS_label-SC_softseg.json index f2a78131a0..fc484f764f 100644 --- a/derivatives/labels_softseg/sub-juntendo750w06/anat/sub-juntendo750w06_flip-1_mt-on_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-juntendo750w06/anat/sub-juntendo750w06_flip-1_mt-on_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:23" + "Date": "2022-10-22 14:36:23", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-juntendo750w06/anat/sub-juntendo750w06_flip-2_mt-off_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-juntendo750w06/anat/sub-juntendo750w06_flip-2_mt-off_space-other_MTS_label-SC_softseg.json index f2a78131a0..fc484f764f 100644 --- a/derivatives/labels_softseg/sub-juntendo750w06/anat/sub-juntendo750w06_flip-2_mt-off_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-juntendo750w06/anat/sub-juntendo750w06_flip-2_mt-off_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:23" + "Date": "2022-10-22 14:36:23", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-juntendo750w06/anat/sub-juntendo750w06_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-juntendo750w06/anat/sub-juntendo750w06_space-other_T1w_label-SC_softseg.json index f2a78131a0..a96fd50dfb 100644 --- a/derivatives/labels_softseg/sub-juntendo750w06/anat/sub-juntendo750w06_space-other_T1w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-juntendo750w06/anat/sub-juntendo750w06_space-other_T1w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:23" + "Date": "2022-10-22 14:36:23", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-juntendo750w06/anat/sub-juntendo750w06_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-juntendo750w06/anat/sub-juntendo750w06_space-other_T2star_label-SC_softseg.json index f2a78131a0..9343f7d35f 100644 --- a/derivatives/labels_softseg/sub-juntendo750w06/anat/sub-juntendo750w06_space-other_T2star_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-juntendo750w06/anat/sub-juntendo750w06_space-other_T2star_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:23" + "Date": "2022-10-22 14:36:23", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-juntendo750w06/anat/sub-juntendo750w06_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-juntendo750w06/anat/sub-juntendo750w06_space-other_T2w_label-SC_softseg.json index f2a78131a0..d76d7b5832 100644 --- a/derivatives/labels_softseg/sub-juntendo750w06/anat/sub-juntendo750w06_space-other_T2w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-juntendo750w06/anat/sub-juntendo750w06_space-other_T2w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:23" + "Date": "2022-10-22 14:36:23", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-mgh01/anat/sub-mgh01_flip-1_mt-on_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-mgh01/anat/sub-mgh01_flip-1_mt-on_space-other_MTS_label-SC_softseg.json index f2a78131a0..fc484f764f 100644 --- a/derivatives/labels_softseg/sub-mgh01/anat/sub-mgh01_flip-1_mt-on_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-mgh01/anat/sub-mgh01_flip-1_mt-on_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:23" + "Date": "2022-10-22 14:36:23", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-mgh01/anat/sub-mgh01_flip-2_mt-off_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-mgh01/anat/sub-mgh01_flip-2_mt-off_space-other_MTS_label-SC_softseg.json index f2a78131a0..fc484f764f 100644 --- a/derivatives/labels_softseg/sub-mgh01/anat/sub-mgh01_flip-2_mt-off_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-mgh01/anat/sub-mgh01_flip-2_mt-off_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:23" + "Date": "2022-10-22 14:36:23", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-mgh01/anat/sub-mgh01_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-mgh01/anat/sub-mgh01_space-other_T1w_label-SC_softseg.json index f2a78131a0..a96fd50dfb 100644 --- a/derivatives/labels_softseg/sub-mgh01/anat/sub-mgh01_space-other_T1w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-mgh01/anat/sub-mgh01_space-other_T1w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:23" + "Date": "2022-10-22 14:36:23", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-mgh01/anat/sub-mgh01_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-mgh01/anat/sub-mgh01_space-other_T2star_label-SC_softseg.json index f2a78131a0..9343f7d35f 100644 --- a/derivatives/labels_softseg/sub-mgh01/anat/sub-mgh01_space-other_T2star_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-mgh01/anat/sub-mgh01_space-other_T2star_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:23" + "Date": "2022-10-22 14:36:23", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-mgh01/anat/sub-mgh01_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-mgh01/anat/sub-mgh01_space-other_T2w_label-SC_softseg.json index f2a78131a0..d76d7b5832 100644 --- a/derivatives/labels_softseg/sub-mgh01/anat/sub-mgh01_space-other_T2w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-mgh01/anat/sub-mgh01_space-other_T2w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:23" + "Date": "2022-10-22 14:36:23", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-mgh02/anat/sub-mgh02_flip-1_mt-on_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-mgh02/anat/sub-mgh02_flip-1_mt-on_space-other_MTS_label-SC_softseg.json index f2a78131a0..fc484f764f 100644 --- a/derivatives/labels_softseg/sub-mgh02/anat/sub-mgh02_flip-1_mt-on_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-mgh02/anat/sub-mgh02_flip-1_mt-on_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:23" + "Date": "2022-10-22 14:36:23", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-mgh02/anat/sub-mgh02_flip-2_mt-off_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-mgh02/anat/sub-mgh02_flip-2_mt-off_space-other_MTS_label-SC_softseg.json index f2a78131a0..fc484f764f 100644 --- a/derivatives/labels_softseg/sub-mgh02/anat/sub-mgh02_flip-2_mt-off_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-mgh02/anat/sub-mgh02_flip-2_mt-off_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:23" + "Date": "2022-10-22 14:36:23", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-mgh02/anat/sub-mgh02_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-mgh02/anat/sub-mgh02_space-other_T1w_label-SC_softseg.json index f2a78131a0..a96fd50dfb 100644 --- a/derivatives/labels_softseg/sub-mgh02/anat/sub-mgh02_space-other_T1w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-mgh02/anat/sub-mgh02_space-other_T1w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:23" + "Date": "2022-10-22 14:36:23", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-mgh02/anat/sub-mgh02_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-mgh02/anat/sub-mgh02_space-other_T2star_label-SC_softseg.json index f2a78131a0..9343f7d35f 100644 --- a/derivatives/labels_softseg/sub-mgh02/anat/sub-mgh02_space-other_T2star_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-mgh02/anat/sub-mgh02_space-other_T2star_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:23" + "Date": "2022-10-22 14:36:23", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-mgh02/anat/sub-mgh02_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-mgh02/anat/sub-mgh02_space-other_T2w_label-SC_softseg.json index f2a78131a0..d76d7b5832 100644 --- a/derivatives/labels_softseg/sub-mgh02/anat/sub-mgh02_space-other_T2w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-mgh02/anat/sub-mgh02_space-other_T2w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:23" + "Date": "2022-10-22 14:36:23", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-mgh03/anat/sub-mgh03_flip-1_mt-on_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-mgh03/anat/sub-mgh03_flip-1_mt-on_space-other_MTS_label-SC_softseg.json index 0a66c7c0c3..0b55cfad47 100644 --- a/derivatives/labels_softseg/sub-mgh03/anat/sub-mgh03_flip-1_mt-on_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-mgh03/anat/sub-mgh03_flip-1_mt-on_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:24" + "Date": "2022-10-22 14:36:24", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-mgh03/anat/sub-mgh03_flip-2_mt-off_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-mgh03/anat/sub-mgh03_flip-2_mt-off_space-other_MTS_label-SC_softseg.json index 0a66c7c0c3..0b55cfad47 100644 --- a/derivatives/labels_softseg/sub-mgh03/anat/sub-mgh03_flip-2_mt-off_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-mgh03/anat/sub-mgh03_flip-2_mt-off_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:24" + "Date": "2022-10-22 14:36:24", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-mgh03/anat/sub-mgh03_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-mgh03/anat/sub-mgh03_space-other_T1w_label-SC_softseg.json index 0a66c7c0c3..e94e1f4f96 100644 --- a/derivatives/labels_softseg/sub-mgh03/anat/sub-mgh03_space-other_T1w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-mgh03/anat/sub-mgh03_space-other_T1w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:24" + "Date": "2022-10-22 14:36:24", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-mgh03/anat/sub-mgh03_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-mgh03/anat/sub-mgh03_space-other_T2star_label-SC_softseg.json index 0a66c7c0c3..b5184dbc5b 100644 --- a/derivatives/labels_softseg/sub-mgh03/anat/sub-mgh03_space-other_T2star_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-mgh03/anat/sub-mgh03_space-other_T2star_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:24" + "Date": "2022-10-22 14:36:24", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-mgh03/anat/sub-mgh03_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-mgh03/anat/sub-mgh03_space-other_T2w_label-SC_softseg.json index 0a66c7c0c3..908aee24b6 100644 --- a/derivatives/labels_softseg/sub-mgh03/anat/sub-mgh03_space-other_T2w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-mgh03/anat/sub-mgh03_space-other_T2w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:24" + "Date": "2022-10-22 14:36:24", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-mgh04/anat/sub-mgh04_flip-1_mt-on_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-mgh04/anat/sub-mgh04_flip-1_mt-on_space-other_MTS_label-SC_softseg.json index 0a66c7c0c3..0b55cfad47 100644 --- a/derivatives/labels_softseg/sub-mgh04/anat/sub-mgh04_flip-1_mt-on_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-mgh04/anat/sub-mgh04_flip-1_mt-on_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:24" + "Date": "2022-10-22 14:36:24", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-mgh04/anat/sub-mgh04_flip-2_mt-off_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-mgh04/anat/sub-mgh04_flip-2_mt-off_space-other_MTS_label-SC_softseg.json index 0a66c7c0c3..0b55cfad47 100644 --- a/derivatives/labels_softseg/sub-mgh04/anat/sub-mgh04_flip-2_mt-off_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-mgh04/anat/sub-mgh04_flip-2_mt-off_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:24" + "Date": "2022-10-22 14:36:24", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-mgh04/anat/sub-mgh04_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-mgh04/anat/sub-mgh04_space-other_T1w_label-SC_softseg.json index 0a66c7c0c3..e94e1f4f96 100644 --- a/derivatives/labels_softseg/sub-mgh04/anat/sub-mgh04_space-other_T1w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-mgh04/anat/sub-mgh04_space-other_T1w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:24" + "Date": "2022-10-22 14:36:24", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-mgh04/anat/sub-mgh04_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-mgh04/anat/sub-mgh04_space-other_T2star_label-SC_softseg.json index 0a66c7c0c3..b5184dbc5b 100644 --- a/derivatives/labels_softseg/sub-mgh04/anat/sub-mgh04_space-other_T2star_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-mgh04/anat/sub-mgh04_space-other_T2star_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:24" + "Date": "2022-10-22 14:36:24", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-mgh04/anat/sub-mgh04_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-mgh04/anat/sub-mgh04_space-other_T2w_label-SC_softseg.json index 0a66c7c0c3..908aee24b6 100644 --- a/derivatives/labels_softseg/sub-mgh04/anat/sub-mgh04_space-other_T2w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-mgh04/anat/sub-mgh04_space-other_T2w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:24" + "Date": "2022-10-22 14:36:24", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-mgh05/anat/sub-mgh05_flip-1_mt-on_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-mgh05/anat/sub-mgh05_flip-1_mt-on_space-other_MTS_label-SC_softseg.json index 0a66c7c0c3..0b55cfad47 100644 --- a/derivatives/labels_softseg/sub-mgh05/anat/sub-mgh05_flip-1_mt-on_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-mgh05/anat/sub-mgh05_flip-1_mt-on_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:24" + "Date": "2022-10-22 14:36:24", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-mgh05/anat/sub-mgh05_flip-2_mt-off_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-mgh05/anat/sub-mgh05_flip-2_mt-off_space-other_MTS_label-SC_softseg.json index 0a66c7c0c3..0b55cfad47 100644 --- a/derivatives/labels_softseg/sub-mgh05/anat/sub-mgh05_flip-2_mt-off_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-mgh05/anat/sub-mgh05_flip-2_mt-off_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:24" + "Date": "2022-10-22 14:36:24", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-mgh05/anat/sub-mgh05_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-mgh05/anat/sub-mgh05_space-other_T1w_label-SC_softseg.json index 0a66c7c0c3..e94e1f4f96 100644 --- a/derivatives/labels_softseg/sub-mgh05/anat/sub-mgh05_space-other_T1w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-mgh05/anat/sub-mgh05_space-other_T1w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:24" + "Date": "2022-10-22 14:36:24", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-mgh05/anat/sub-mgh05_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-mgh05/anat/sub-mgh05_space-other_T2star_label-SC_softseg.json index 0a66c7c0c3..b5184dbc5b 100644 --- a/derivatives/labels_softseg/sub-mgh05/anat/sub-mgh05_space-other_T2star_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-mgh05/anat/sub-mgh05_space-other_T2star_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:24" + "Date": "2022-10-22 14:36:24", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-mgh05/anat/sub-mgh05_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-mgh05/anat/sub-mgh05_space-other_T2w_label-SC_softseg.json index 0a66c7c0c3..908aee24b6 100644 --- a/derivatives/labels_softseg/sub-mgh05/anat/sub-mgh05_space-other_T2w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-mgh05/anat/sub-mgh05_space-other_T2w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:24" + "Date": "2022-10-22 14:36:24", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-mgh06/anat/sub-mgh06_flip-1_mt-on_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-mgh06/anat/sub-mgh06_flip-1_mt-on_space-other_MTS_label-SC_softseg.json index 0a66c7c0c3..0b55cfad47 100644 --- a/derivatives/labels_softseg/sub-mgh06/anat/sub-mgh06_flip-1_mt-on_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-mgh06/anat/sub-mgh06_flip-1_mt-on_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:24" + "Date": "2022-10-22 14:36:24", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-mgh06/anat/sub-mgh06_flip-2_mt-off_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-mgh06/anat/sub-mgh06_flip-2_mt-off_space-other_MTS_label-SC_softseg.json index 0a66c7c0c3..0b55cfad47 100644 --- a/derivatives/labels_softseg/sub-mgh06/anat/sub-mgh06_flip-2_mt-off_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-mgh06/anat/sub-mgh06_flip-2_mt-off_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:24" + "Date": "2022-10-22 14:36:24", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-mgh06/anat/sub-mgh06_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-mgh06/anat/sub-mgh06_space-other_T1w_label-SC_softseg.json index 0a66c7c0c3..e94e1f4f96 100644 --- a/derivatives/labels_softseg/sub-mgh06/anat/sub-mgh06_space-other_T1w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-mgh06/anat/sub-mgh06_space-other_T1w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:24" + "Date": "2022-10-22 14:36:24", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-mgh06/anat/sub-mgh06_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-mgh06/anat/sub-mgh06_space-other_T2star_label-SC_softseg.json index 0a66c7c0c3..b5184dbc5b 100644 --- a/derivatives/labels_softseg/sub-mgh06/anat/sub-mgh06_space-other_T2star_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-mgh06/anat/sub-mgh06_space-other_T2star_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:24" + "Date": "2022-10-22 14:36:24", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-mgh06/anat/sub-mgh06_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-mgh06/anat/sub-mgh06_space-other_T2w_label-SC_softseg.json index 0a66c7c0c3..908aee24b6 100644 --- a/derivatives/labels_softseg/sub-mgh06/anat/sub-mgh06_space-other_T2w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-mgh06/anat/sub-mgh06_space-other_T2w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:24" + "Date": "2022-10-22 14:36:24", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-milan01/anat/sub-milan01_flip-1_mt-on_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-milan01/anat/sub-milan01_flip-1_mt-on_space-other_MTS_label-SC_softseg.json index d1cc059831..790c0976d7 100644 --- a/derivatives/labels_softseg/sub-milan01/anat/sub-milan01_flip-1_mt-on_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-milan01/anat/sub-milan01_flip-1_mt-on_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:25" + "Date": "2022-10-22 14:36:25", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-milan01/anat/sub-milan01_flip-2_mt-off_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-milan01/anat/sub-milan01_flip-2_mt-off_space-other_MTS_label-SC_softseg.json index d1cc059831..790c0976d7 100644 --- a/derivatives/labels_softseg/sub-milan01/anat/sub-milan01_flip-2_mt-off_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-milan01/anat/sub-milan01_flip-2_mt-off_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:25" + "Date": "2022-10-22 14:36:25", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-milan01/anat/sub-milan01_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-milan01/anat/sub-milan01_space-other_T1w_label-SC_softseg.json index d1cc059831..4b9d353821 100644 --- a/derivatives/labels_softseg/sub-milan01/anat/sub-milan01_space-other_T1w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-milan01/anat/sub-milan01_space-other_T1w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:25" + "Date": "2022-10-22 14:36:25", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-milan01/anat/sub-milan01_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-milan01/anat/sub-milan01_space-other_T2star_label-SC_softseg.json index d1cc059831..ac97406c9b 100644 --- a/derivatives/labels_softseg/sub-milan01/anat/sub-milan01_space-other_T2star_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-milan01/anat/sub-milan01_space-other_T2star_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:25" + "Date": "2022-10-22 14:36:25", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-milan01/anat/sub-milan01_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-milan01/anat/sub-milan01_space-other_T2w_label-SC_softseg.json index d1cc059831..81fc017305 100644 --- a/derivatives/labels_softseg/sub-milan01/anat/sub-milan01_space-other_T2w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-milan01/anat/sub-milan01_space-other_T2w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:25" + "Date": "2022-10-22 14:36:25", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-milan02/anat/sub-milan02_flip-1_mt-on_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-milan02/anat/sub-milan02_flip-1_mt-on_space-other_MTS_label-SC_softseg.json index d1cc059831..790c0976d7 100644 --- a/derivatives/labels_softseg/sub-milan02/anat/sub-milan02_flip-1_mt-on_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-milan02/anat/sub-milan02_flip-1_mt-on_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:25" + "Date": "2022-10-22 14:36:25", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-milan02/anat/sub-milan02_flip-2_mt-off_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-milan02/anat/sub-milan02_flip-2_mt-off_space-other_MTS_label-SC_softseg.json index d1cc059831..790c0976d7 100644 --- a/derivatives/labels_softseg/sub-milan02/anat/sub-milan02_flip-2_mt-off_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-milan02/anat/sub-milan02_flip-2_mt-off_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:25" + "Date": "2022-10-22 14:36:25", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-milan02/anat/sub-milan02_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-milan02/anat/sub-milan02_space-other_T1w_label-SC_softseg.json index d1cc059831..4b9d353821 100644 --- a/derivatives/labels_softseg/sub-milan02/anat/sub-milan02_space-other_T1w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-milan02/anat/sub-milan02_space-other_T1w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:25" + "Date": "2022-10-22 14:36:25", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-milan02/anat/sub-milan02_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-milan02/anat/sub-milan02_space-other_T2star_label-SC_softseg.json index d1cc059831..ac97406c9b 100644 --- a/derivatives/labels_softseg/sub-milan02/anat/sub-milan02_space-other_T2star_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-milan02/anat/sub-milan02_space-other_T2star_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:25" + "Date": "2022-10-22 14:36:25", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-milan02/anat/sub-milan02_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-milan02/anat/sub-milan02_space-other_T2w_label-SC_softseg.json index d1cc059831..81fc017305 100644 --- a/derivatives/labels_softseg/sub-milan02/anat/sub-milan02_space-other_T2w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-milan02/anat/sub-milan02_space-other_T2w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:25" + "Date": "2022-10-22 14:36:25", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-milan03/anat/sub-milan03_flip-1_mt-on_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-milan03/anat/sub-milan03_flip-1_mt-on_space-other_MTS_label-SC_softseg.json index d1cc059831..790c0976d7 100644 --- a/derivatives/labels_softseg/sub-milan03/anat/sub-milan03_flip-1_mt-on_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-milan03/anat/sub-milan03_flip-1_mt-on_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:25" + "Date": "2022-10-22 14:36:25", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-milan03/anat/sub-milan03_flip-2_mt-off_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-milan03/anat/sub-milan03_flip-2_mt-off_space-other_MTS_label-SC_softseg.json index d1cc059831..790c0976d7 100644 --- a/derivatives/labels_softseg/sub-milan03/anat/sub-milan03_flip-2_mt-off_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-milan03/anat/sub-milan03_flip-2_mt-off_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:25" + "Date": "2022-10-22 14:36:25", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-milan03/anat/sub-milan03_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-milan03/anat/sub-milan03_space-other_T1w_label-SC_softseg.json index d1cc059831..4b9d353821 100644 --- a/derivatives/labels_softseg/sub-milan03/anat/sub-milan03_space-other_T1w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-milan03/anat/sub-milan03_space-other_T1w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:25" + "Date": "2022-10-22 14:36:25", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-milan03/anat/sub-milan03_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-milan03/anat/sub-milan03_space-other_T2star_label-SC_softseg.json index d1cc059831..ac97406c9b 100644 --- a/derivatives/labels_softseg/sub-milan03/anat/sub-milan03_space-other_T2star_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-milan03/anat/sub-milan03_space-other_T2star_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:25" + "Date": "2022-10-22 14:36:25", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-milan03/anat/sub-milan03_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-milan03/anat/sub-milan03_space-other_T2w_label-SC_softseg.json index d1cc059831..81fc017305 100644 --- a/derivatives/labels_softseg/sub-milan03/anat/sub-milan03_space-other_T2w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-milan03/anat/sub-milan03_space-other_T2w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:25" + "Date": "2022-10-22 14:36:25", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-milan04/anat/sub-milan04_flip-1_mt-on_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-milan04/anat/sub-milan04_flip-1_mt-on_space-other_MTS_label-SC_softseg.json index d1cc059831..790c0976d7 100644 --- a/derivatives/labels_softseg/sub-milan04/anat/sub-milan04_flip-1_mt-on_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-milan04/anat/sub-milan04_flip-1_mt-on_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:25" + "Date": "2022-10-22 14:36:25", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-milan04/anat/sub-milan04_flip-2_mt-off_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-milan04/anat/sub-milan04_flip-2_mt-off_space-other_MTS_label-SC_softseg.json index d1cc059831..790c0976d7 100644 --- a/derivatives/labels_softseg/sub-milan04/anat/sub-milan04_flip-2_mt-off_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-milan04/anat/sub-milan04_flip-2_mt-off_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:25" + "Date": "2022-10-22 14:36:25", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-milan04/anat/sub-milan04_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-milan04/anat/sub-milan04_space-other_T1w_label-SC_softseg.json index d1cc059831..4b9d353821 100644 --- a/derivatives/labels_softseg/sub-milan04/anat/sub-milan04_space-other_T1w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-milan04/anat/sub-milan04_space-other_T1w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:25" + "Date": "2022-10-22 14:36:25", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-milan04/anat/sub-milan04_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-milan04/anat/sub-milan04_space-other_T2star_label-SC_softseg.json index d1cc059831..ac97406c9b 100644 --- a/derivatives/labels_softseg/sub-milan04/anat/sub-milan04_space-other_T2star_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-milan04/anat/sub-milan04_space-other_T2star_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:25" + "Date": "2022-10-22 14:36:25", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-milan04/anat/sub-milan04_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-milan04/anat/sub-milan04_space-other_T2w_label-SC_softseg.json index d1cc059831..81fc017305 100644 --- a/derivatives/labels_softseg/sub-milan04/anat/sub-milan04_space-other_T2w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-milan04/anat/sub-milan04_space-other_T2w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:25" + "Date": "2022-10-22 14:36:25", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-milan05/anat/sub-milan05_flip-1_mt-on_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-milan05/anat/sub-milan05_flip-1_mt-on_space-other_MTS_label-SC_softseg.json index f2e1189bfc..74761e0852 100644 --- a/derivatives/labels_softseg/sub-milan05/anat/sub-milan05_flip-1_mt-on_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-milan05/anat/sub-milan05_flip-1_mt-on_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:26" + "Date": "2022-10-22 14:36:26", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-milan05/anat/sub-milan05_flip-2_mt-off_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-milan05/anat/sub-milan05_flip-2_mt-off_space-other_MTS_label-SC_softseg.json index f2e1189bfc..74761e0852 100644 --- a/derivatives/labels_softseg/sub-milan05/anat/sub-milan05_flip-2_mt-off_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-milan05/anat/sub-milan05_flip-2_mt-off_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:26" + "Date": "2022-10-22 14:36:26", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-milan05/anat/sub-milan05_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-milan05/anat/sub-milan05_space-other_T1w_label-SC_softseg.json index f2e1189bfc..7967ff8da0 100644 --- a/derivatives/labels_softseg/sub-milan05/anat/sub-milan05_space-other_T1w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-milan05/anat/sub-milan05_space-other_T1w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:26" + "Date": "2022-10-22 14:36:26", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-milan05/anat/sub-milan05_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-milan05/anat/sub-milan05_space-other_T2star_label-SC_softseg.json index f2e1189bfc..7041a9738d 100644 --- a/derivatives/labels_softseg/sub-milan05/anat/sub-milan05_space-other_T2star_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-milan05/anat/sub-milan05_space-other_T2star_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:26" + "Date": "2022-10-22 14:36:26", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-milan05/anat/sub-milan05_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-milan05/anat/sub-milan05_space-other_T2w_label-SC_softseg.json index f2e1189bfc..93888968f6 100644 --- a/derivatives/labels_softseg/sub-milan05/anat/sub-milan05_space-other_T2w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-milan05/anat/sub-milan05_space-other_T2w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:26" + "Date": "2022-10-22 14:36:26", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-milan06/anat/sub-milan06_flip-1_mt-on_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-milan06/anat/sub-milan06_flip-1_mt-on_space-other_MTS_label-SC_softseg.json index f2e1189bfc..74761e0852 100644 --- a/derivatives/labels_softseg/sub-milan06/anat/sub-milan06_flip-1_mt-on_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-milan06/anat/sub-milan06_flip-1_mt-on_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:26" + "Date": "2022-10-22 14:36:26", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-milan06/anat/sub-milan06_flip-2_mt-off_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-milan06/anat/sub-milan06_flip-2_mt-off_space-other_MTS_label-SC_softseg.json index f2e1189bfc..74761e0852 100644 --- a/derivatives/labels_softseg/sub-milan06/anat/sub-milan06_flip-2_mt-off_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-milan06/anat/sub-milan06_flip-2_mt-off_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:26" + "Date": "2022-10-22 14:36:26", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-milan06/anat/sub-milan06_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-milan06/anat/sub-milan06_space-other_T1w_label-SC_softseg.json index f2e1189bfc..7967ff8da0 100644 --- a/derivatives/labels_softseg/sub-milan06/anat/sub-milan06_space-other_T1w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-milan06/anat/sub-milan06_space-other_T1w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:26" + "Date": "2022-10-22 14:36:26", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-milan06/anat/sub-milan06_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-milan06/anat/sub-milan06_space-other_T2star_label-SC_softseg.json index f2e1189bfc..7041a9738d 100644 --- a/derivatives/labels_softseg/sub-milan06/anat/sub-milan06_space-other_T2star_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-milan06/anat/sub-milan06_space-other_T2star_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:26" + "Date": "2022-10-22 14:36:26", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-milan06/anat/sub-milan06_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-milan06/anat/sub-milan06_space-other_T2w_label-SC_softseg.json index f2e1189bfc..93888968f6 100644 --- a/derivatives/labels_softseg/sub-milan06/anat/sub-milan06_space-other_T2w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-milan06/anat/sub-milan06_space-other_T2w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:26" + "Date": "2022-10-22 14:36:26", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-milan07/anat/sub-milan07_flip-1_mt-on_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-milan07/anat/sub-milan07_flip-1_mt-on_space-other_MTS_label-SC_softseg.json index f2e1189bfc..74761e0852 100644 --- a/derivatives/labels_softseg/sub-milan07/anat/sub-milan07_flip-1_mt-on_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-milan07/anat/sub-milan07_flip-1_mt-on_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:26" + "Date": "2022-10-22 14:36:26", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-milan07/anat/sub-milan07_flip-2_mt-off_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-milan07/anat/sub-milan07_flip-2_mt-off_space-other_MTS_label-SC_softseg.json index f2e1189bfc..74761e0852 100644 --- a/derivatives/labels_softseg/sub-milan07/anat/sub-milan07_flip-2_mt-off_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-milan07/anat/sub-milan07_flip-2_mt-off_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:26" + "Date": "2022-10-22 14:36:26", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-milan07/anat/sub-milan07_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-milan07/anat/sub-milan07_space-other_T1w_label-SC_softseg.json index f2e1189bfc..7967ff8da0 100644 --- a/derivatives/labels_softseg/sub-milan07/anat/sub-milan07_space-other_T1w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-milan07/anat/sub-milan07_space-other_T1w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:26" + "Date": "2022-10-22 14:36:26", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-milan07/anat/sub-milan07_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-milan07/anat/sub-milan07_space-other_T2star_label-SC_softseg.json index f2e1189bfc..7041a9738d 100644 --- a/derivatives/labels_softseg/sub-milan07/anat/sub-milan07_space-other_T2star_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-milan07/anat/sub-milan07_space-other_T2star_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:26" + "Date": "2022-10-22 14:36:26", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-milan07/anat/sub-milan07_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-milan07/anat/sub-milan07_space-other_T2w_label-SC_softseg.json index f2e1189bfc..93888968f6 100644 --- a/derivatives/labels_softseg/sub-milan07/anat/sub-milan07_space-other_T2w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-milan07/anat/sub-milan07_space-other_T2w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:26" + "Date": "2022-10-22 14:36:26", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-mniPilot1/anat/sub-mniPilot1_flip-1_mt-on_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-mniPilot1/anat/sub-mniPilot1_flip-1_mt-on_space-other_MTS_label-SC_softseg.json index f2e1189bfc..74761e0852 100644 --- a/derivatives/labels_softseg/sub-mniPilot1/anat/sub-mniPilot1_flip-1_mt-on_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-mniPilot1/anat/sub-mniPilot1_flip-1_mt-on_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:26" + "Date": "2022-10-22 14:36:26", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-mniPilot1/anat/sub-mniPilot1_flip-2_mt-off_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-mniPilot1/anat/sub-mniPilot1_flip-2_mt-off_space-other_MTS_label-SC_softseg.json index f2e1189bfc..74761e0852 100644 --- a/derivatives/labels_softseg/sub-mniPilot1/anat/sub-mniPilot1_flip-2_mt-off_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-mniPilot1/anat/sub-mniPilot1_flip-2_mt-off_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:26" + "Date": "2022-10-22 14:36:26", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-mniPilot1/anat/sub-mniPilot1_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-mniPilot1/anat/sub-mniPilot1_space-other_T1w_label-SC_softseg.json index f2e1189bfc..7967ff8da0 100644 --- a/derivatives/labels_softseg/sub-mniPilot1/anat/sub-mniPilot1_space-other_T1w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-mniPilot1/anat/sub-mniPilot1_space-other_T1w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:26" + "Date": "2022-10-22 14:36:26", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-mniPilot1/anat/sub-mniPilot1_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-mniPilot1/anat/sub-mniPilot1_space-other_T2star_label-SC_softseg.json index 6517718c41..892b111d7d 100644 --- a/derivatives/labels_softseg/sub-mniPilot1/anat/sub-mniPilot1_space-other_T2star_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-mniPilot1/anat/sub-mniPilot1_space-other_T2star_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:27" + "Date": "2022-10-22 14:36:27", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-mniPilot1/anat/sub-mniPilot1_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-mniPilot1/anat/sub-mniPilot1_space-other_T2w_label-SC_softseg.json index 6517718c41..365a7d5dfa 100644 --- a/derivatives/labels_softseg/sub-mniPilot1/anat/sub-mniPilot1_space-other_T2w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-mniPilot1/anat/sub-mniPilot1_space-other_T2w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:27" + "Date": "2022-10-22 14:36:27", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-mniS01/anat/sub-mniS01_flip-1_mt-on_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-mniS01/anat/sub-mniS01_flip-1_mt-on_space-other_MTS_label-SC_softseg.json index 6517718c41..ee78f48bab 100644 --- a/derivatives/labels_softseg/sub-mniS01/anat/sub-mniS01_flip-1_mt-on_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-mniS01/anat/sub-mniS01_flip-1_mt-on_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:27" + "Date": "2022-10-22 14:36:27", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-mniS01/anat/sub-mniS01_flip-2_mt-off_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-mniS01/anat/sub-mniS01_flip-2_mt-off_space-other_MTS_label-SC_softseg.json index 6517718c41..ee78f48bab 100644 --- a/derivatives/labels_softseg/sub-mniS01/anat/sub-mniS01_flip-2_mt-off_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-mniS01/anat/sub-mniS01_flip-2_mt-off_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:27" + "Date": "2022-10-22 14:36:27", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-mniS01/anat/sub-mniS01_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-mniS01/anat/sub-mniS01_space-other_T1w_label-SC_softseg.json index 6517718c41..86812d65fc 100644 --- a/derivatives/labels_softseg/sub-mniS01/anat/sub-mniS01_space-other_T1w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-mniS01/anat/sub-mniS01_space-other_T1w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:27" + "Date": "2022-10-22 14:36:27", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-mniS01/anat/sub-mniS01_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-mniS01/anat/sub-mniS01_space-other_T2star_label-SC_softseg.json index 6517718c41..892b111d7d 100644 --- a/derivatives/labels_softseg/sub-mniS01/anat/sub-mniS01_space-other_T2star_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-mniS01/anat/sub-mniS01_space-other_T2star_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:27" + "Date": "2022-10-22 14:36:27", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-mniS01/anat/sub-mniS01_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-mniS01/anat/sub-mniS01_space-other_T2w_label-SC_softseg.json index 6517718c41..365a7d5dfa 100644 --- a/derivatives/labels_softseg/sub-mniS01/anat/sub-mniS01_space-other_T2w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-mniS01/anat/sub-mniS01_space-other_T2w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:27" + "Date": "2022-10-22 14:36:27", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-mniS02/anat/sub-mniS02_flip-1_mt-on_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-mniS02/anat/sub-mniS02_flip-1_mt-on_space-other_MTS_label-SC_softseg.json index 6517718c41..ee78f48bab 100644 --- a/derivatives/labels_softseg/sub-mniS02/anat/sub-mniS02_flip-1_mt-on_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-mniS02/anat/sub-mniS02_flip-1_mt-on_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:27" + "Date": "2022-10-22 14:36:27", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-mniS02/anat/sub-mniS02_flip-2_mt-off_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-mniS02/anat/sub-mniS02_flip-2_mt-off_space-other_MTS_label-SC_softseg.json index 6517718c41..ee78f48bab 100644 --- a/derivatives/labels_softseg/sub-mniS02/anat/sub-mniS02_flip-2_mt-off_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-mniS02/anat/sub-mniS02_flip-2_mt-off_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:27" + "Date": "2022-10-22 14:36:27", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-mniS02/anat/sub-mniS02_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-mniS02/anat/sub-mniS02_space-other_T1w_label-SC_softseg.json index 6517718c41..86812d65fc 100644 --- a/derivatives/labels_softseg/sub-mniS02/anat/sub-mniS02_space-other_T1w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-mniS02/anat/sub-mniS02_space-other_T1w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:27" + "Date": "2022-10-22 14:36:27", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-mniS02/anat/sub-mniS02_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-mniS02/anat/sub-mniS02_space-other_T2star_label-SC_softseg.json index 6517718c41..892b111d7d 100644 --- a/derivatives/labels_softseg/sub-mniS02/anat/sub-mniS02_space-other_T2star_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-mniS02/anat/sub-mniS02_space-other_T2star_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:27" + "Date": "2022-10-22 14:36:27", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-mniS02/anat/sub-mniS02_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-mniS02/anat/sub-mniS02_space-other_T2w_label-SC_softseg.json index 6517718c41..365a7d5dfa 100644 --- a/derivatives/labels_softseg/sub-mniS02/anat/sub-mniS02_space-other_T2w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-mniS02/anat/sub-mniS02_space-other_T2w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:27" + "Date": "2022-10-22 14:36:27", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-mniS03/anat/sub-mniS03_flip-1_mt-on_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-mniS03/anat/sub-mniS03_flip-1_mt-on_space-other_MTS_label-SC_softseg.json index 6517718c41..ee78f48bab 100644 --- a/derivatives/labels_softseg/sub-mniS03/anat/sub-mniS03_flip-1_mt-on_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-mniS03/anat/sub-mniS03_flip-1_mt-on_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:27" + "Date": "2022-10-22 14:36:27", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-mniS03/anat/sub-mniS03_flip-2_mt-off_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-mniS03/anat/sub-mniS03_flip-2_mt-off_space-other_MTS_label-SC_softseg.json index 6517718c41..ee78f48bab 100644 --- a/derivatives/labels_softseg/sub-mniS03/anat/sub-mniS03_flip-2_mt-off_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-mniS03/anat/sub-mniS03_flip-2_mt-off_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:27" + "Date": "2022-10-22 14:36:27", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-mniS03/anat/sub-mniS03_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-mniS03/anat/sub-mniS03_space-other_T1w_label-SC_softseg.json index 6517718c41..86812d65fc 100644 --- a/derivatives/labels_softseg/sub-mniS03/anat/sub-mniS03_space-other_T1w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-mniS03/anat/sub-mniS03_space-other_T1w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:27" + "Date": "2022-10-22 14:36:27", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-mniS03/anat/sub-mniS03_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-mniS03/anat/sub-mniS03_space-other_T2star_label-SC_softseg.json index 6517718c41..892b111d7d 100644 --- a/derivatives/labels_softseg/sub-mniS03/anat/sub-mniS03_space-other_T2star_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-mniS03/anat/sub-mniS03_space-other_T2star_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:27" + "Date": "2022-10-22 14:36:27", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-mniS03/anat/sub-mniS03_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-mniS03/anat/sub-mniS03_space-other_T2w_label-SC_softseg.json index 6517718c41..365a7d5dfa 100644 --- a/derivatives/labels_softseg/sub-mniS03/anat/sub-mniS03_space-other_T2w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-mniS03/anat/sub-mniS03_space-other_T2w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:27" + "Date": "2022-10-22 14:36:27", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-mniS04/anat/sub-mniS04_flip-1_mt-on_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-mniS04/anat/sub-mniS04_flip-1_mt-on_space-other_MTS_label-SC_softseg.json index 6517718c41..ee78f48bab 100644 --- a/derivatives/labels_softseg/sub-mniS04/anat/sub-mniS04_flip-1_mt-on_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-mniS04/anat/sub-mniS04_flip-1_mt-on_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:27" + "Date": "2022-10-22 14:36:27", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-mniS04/anat/sub-mniS04_flip-2_mt-off_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-mniS04/anat/sub-mniS04_flip-2_mt-off_space-other_MTS_label-SC_softseg.json index 6517718c41..ee78f48bab 100644 --- a/derivatives/labels_softseg/sub-mniS04/anat/sub-mniS04_flip-2_mt-off_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-mniS04/anat/sub-mniS04_flip-2_mt-off_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:27" + "Date": "2022-10-22 14:36:27", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-mniS04/anat/sub-mniS04_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-mniS04/anat/sub-mniS04_space-other_T1w_label-SC_softseg.json index e74ad52ef6..6e1ec1fd19 100644 --- a/derivatives/labels_softseg/sub-mniS04/anat/sub-mniS04_space-other_T1w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-mniS04/anat/sub-mniS04_space-other_T1w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:28" + "Date": "2022-10-22 14:36:28", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-mniS04/anat/sub-mniS04_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-mniS04/anat/sub-mniS04_space-other_T2star_label-SC_softseg.json index e74ad52ef6..4f4d2f5286 100644 --- a/derivatives/labels_softseg/sub-mniS04/anat/sub-mniS04_space-other_T2star_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-mniS04/anat/sub-mniS04_space-other_T2star_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:28" + "Date": "2022-10-22 14:36:28", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-mniS04/anat/sub-mniS04_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-mniS04/anat/sub-mniS04_space-other_T2w_label-SC_softseg.json index e74ad52ef6..23dbd13ead 100644 --- a/derivatives/labels_softseg/sub-mniS04/anat/sub-mniS04_space-other_T2w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-mniS04/anat/sub-mniS04_space-other_T2w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:28" + "Date": "2022-10-22 14:36:28", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-mniS05/anat/sub-mniS05_flip-1_mt-on_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-mniS05/anat/sub-mniS05_flip-1_mt-on_space-other_MTS_label-SC_softseg.json index e74ad52ef6..e33a843259 100644 --- a/derivatives/labels_softseg/sub-mniS05/anat/sub-mniS05_flip-1_mt-on_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-mniS05/anat/sub-mniS05_flip-1_mt-on_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:28" + "Date": "2022-10-22 14:36:28", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-mniS05/anat/sub-mniS05_flip-2_mt-off_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-mniS05/anat/sub-mniS05_flip-2_mt-off_space-other_MTS_label-SC_softseg.json index e74ad52ef6..e33a843259 100644 --- a/derivatives/labels_softseg/sub-mniS05/anat/sub-mniS05_flip-2_mt-off_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-mniS05/anat/sub-mniS05_flip-2_mt-off_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:28" + "Date": "2022-10-22 14:36:28", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-mniS05/anat/sub-mniS05_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-mniS05/anat/sub-mniS05_space-other_T1w_label-SC_softseg.json index e74ad52ef6..6e1ec1fd19 100644 --- a/derivatives/labels_softseg/sub-mniS05/anat/sub-mniS05_space-other_T1w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-mniS05/anat/sub-mniS05_space-other_T1w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:28" + "Date": "2022-10-22 14:36:28", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-mniS05/anat/sub-mniS05_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-mniS05/anat/sub-mniS05_space-other_T2star_label-SC_softseg.json index e74ad52ef6..4f4d2f5286 100644 --- a/derivatives/labels_softseg/sub-mniS05/anat/sub-mniS05_space-other_T2star_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-mniS05/anat/sub-mniS05_space-other_T2star_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:28" + "Date": "2022-10-22 14:36:28", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-mniS05/anat/sub-mniS05_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-mniS05/anat/sub-mniS05_space-other_T2w_label-SC_softseg.json index e74ad52ef6..23dbd13ead 100644 --- a/derivatives/labels_softseg/sub-mniS05/anat/sub-mniS05_space-other_T2w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-mniS05/anat/sub-mniS05_space-other_T2w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:28" + "Date": "2022-10-22 14:36:28", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-mniS06/anat/sub-mniS06_flip-1_mt-on_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-mniS06/anat/sub-mniS06_flip-1_mt-on_space-other_MTS_label-SC_softseg.json index e74ad52ef6..e33a843259 100644 --- a/derivatives/labels_softseg/sub-mniS06/anat/sub-mniS06_flip-1_mt-on_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-mniS06/anat/sub-mniS06_flip-1_mt-on_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:28" + "Date": "2022-10-22 14:36:28", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-mniS06/anat/sub-mniS06_flip-2_mt-off_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-mniS06/anat/sub-mniS06_flip-2_mt-off_space-other_MTS_label-SC_softseg.json index e74ad52ef6..e33a843259 100644 --- a/derivatives/labels_softseg/sub-mniS06/anat/sub-mniS06_flip-2_mt-off_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-mniS06/anat/sub-mniS06_flip-2_mt-off_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:28" + "Date": "2022-10-22 14:36:28", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-mniS06/anat/sub-mniS06_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-mniS06/anat/sub-mniS06_space-other_T1w_label-SC_softseg.json index e74ad52ef6..6e1ec1fd19 100644 --- a/derivatives/labels_softseg/sub-mniS06/anat/sub-mniS06_space-other_T1w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-mniS06/anat/sub-mniS06_space-other_T1w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:28" + "Date": "2022-10-22 14:36:28", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-mniS06/anat/sub-mniS06_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-mniS06/anat/sub-mniS06_space-other_T2star_label-SC_softseg.json index e74ad52ef6..4f4d2f5286 100644 --- a/derivatives/labels_softseg/sub-mniS06/anat/sub-mniS06_space-other_T2star_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-mniS06/anat/sub-mniS06_space-other_T2star_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:28" + "Date": "2022-10-22 14:36:28", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-mniS06/anat/sub-mniS06_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-mniS06/anat/sub-mniS06_space-other_T2w_label-SC_softseg.json index e74ad52ef6..23dbd13ead 100644 --- a/derivatives/labels_softseg/sub-mniS06/anat/sub-mniS06_space-other_T2w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-mniS06/anat/sub-mniS06_space-other_T2w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:28" + "Date": "2022-10-22 14:36:28", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-mniS07/anat/sub-mniS07_flip-1_mt-on_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-mniS07/anat/sub-mniS07_flip-1_mt-on_space-other_MTS_label-SC_softseg.json index e74ad52ef6..e33a843259 100644 --- a/derivatives/labels_softseg/sub-mniS07/anat/sub-mniS07_flip-1_mt-on_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-mniS07/anat/sub-mniS07_flip-1_mt-on_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:28" + "Date": "2022-10-22 14:36:28", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-mniS07/anat/sub-mniS07_flip-2_mt-off_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-mniS07/anat/sub-mniS07_flip-2_mt-off_space-other_MTS_label-SC_softseg.json index e74ad52ef6..e33a843259 100644 --- a/derivatives/labels_softseg/sub-mniS07/anat/sub-mniS07_flip-2_mt-off_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-mniS07/anat/sub-mniS07_flip-2_mt-off_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:28" + "Date": "2022-10-22 14:36:28", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-mniS07/anat/sub-mniS07_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-mniS07/anat/sub-mniS07_space-other_T1w_label-SC_softseg.json index e74ad52ef6..6e1ec1fd19 100644 --- a/derivatives/labels_softseg/sub-mniS07/anat/sub-mniS07_space-other_T1w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-mniS07/anat/sub-mniS07_space-other_T1w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:28" + "Date": "2022-10-22 14:36:28", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-mniS07/anat/sub-mniS07_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-mniS07/anat/sub-mniS07_space-other_T2star_label-SC_softseg.json index e74ad52ef6..4f4d2f5286 100644 --- a/derivatives/labels_softseg/sub-mniS07/anat/sub-mniS07_space-other_T2star_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-mniS07/anat/sub-mniS07_space-other_T2star_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:28" + "Date": "2022-10-22 14:36:28", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-mniS07/anat/sub-mniS07_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-mniS07/anat/sub-mniS07_space-other_T2w_label-SC_softseg.json index e74ad52ef6..23dbd13ead 100644 --- a/derivatives/labels_softseg/sub-mniS07/anat/sub-mniS07_space-other_T2w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-mniS07/anat/sub-mniS07_space-other_T2w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:28" + "Date": "2022-10-22 14:36:28", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-mniS08/anat/sub-mniS08_flip-1_mt-on_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-mniS08/anat/sub-mniS08_flip-1_mt-on_space-other_MTS_label-SC_softseg.json index e74ad52ef6..e33a843259 100644 --- a/derivatives/labels_softseg/sub-mniS08/anat/sub-mniS08_flip-1_mt-on_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-mniS08/anat/sub-mniS08_flip-1_mt-on_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:28" + "Date": "2022-10-22 14:36:28", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-mniS08/anat/sub-mniS08_flip-2_mt-off_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-mniS08/anat/sub-mniS08_flip-2_mt-off_space-other_MTS_label-SC_softseg.json index ffe50aeddb..49a4cd4c40 100644 --- a/derivatives/labels_softseg/sub-mniS08/anat/sub-mniS08_flip-2_mt-off_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-mniS08/anat/sub-mniS08_flip-2_mt-off_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:29" + "Date": "2022-10-22 14:36:29", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-mniS08/anat/sub-mniS08_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-mniS08/anat/sub-mniS08_space-other_T1w_label-SC_softseg.json index ffe50aeddb..f6646b0059 100644 --- a/derivatives/labels_softseg/sub-mniS08/anat/sub-mniS08_space-other_T1w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-mniS08/anat/sub-mniS08_space-other_T1w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:29" + "Date": "2022-10-22 14:36:29", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-mniS08/anat/sub-mniS08_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-mniS08/anat/sub-mniS08_space-other_T2star_label-SC_softseg.json index ffe50aeddb..cd8b25c2e5 100644 --- a/derivatives/labels_softseg/sub-mniS08/anat/sub-mniS08_space-other_T2star_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-mniS08/anat/sub-mniS08_space-other_T2star_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:29" + "Date": "2022-10-22 14:36:29", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-mniS08/anat/sub-mniS08_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-mniS08/anat/sub-mniS08_space-other_T2w_label-SC_softseg.json index ffe50aeddb..3ca3b7bd82 100644 --- a/derivatives/labels_softseg/sub-mniS08/anat/sub-mniS08_space-other_T2w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-mniS08/anat/sub-mniS08_space-other_T2w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:29" + "Date": "2022-10-22 14:36:29", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-mniS09/anat/sub-mniS09_flip-1_mt-on_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-mniS09/anat/sub-mniS09_flip-1_mt-on_space-other_MTS_label-SC_softseg.json index ffe50aeddb..49a4cd4c40 100644 --- a/derivatives/labels_softseg/sub-mniS09/anat/sub-mniS09_flip-1_mt-on_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-mniS09/anat/sub-mniS09_flip-1_mt-on_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:29" + "Date": "2022-10-22 14:36:29", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-mniS09/anat/sub-mniS09_flip-2_mt-off_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-mniS09/anat/sub-mniS09_flip-2_mt-off_space-other_MTS_label-SC_softseg.json index ffe50aeddb..49a4cd4c40 100644 --- a/derivatives/labels_softseg/sub-mniS09/anat/sub-mniS09_flip-2_mt-off_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-mniS09/anat/sub-mniS09_flip-2_mt-off_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:29" + "Date": "2022-10-22 14:36:29", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-mniS09/anat/sub-mniS09_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-mniS09/anat/sub-mniS09_space-other_T1w_label-SC_softseg.json index ffe50aeddb..f6646b0059 100644 --- a/derivatives/labels_softseg/sub-mniS09/anat/sub-mniS09_space-other_T1w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-mniS09/anat/sub-mniS09_space-other_T1w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:29" + "Date": "2022-10-22 14:36:29", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-mniS09/anat/sub-mniS09_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-mniS09/anat/sub-mniS09_space-other_T2star_label-SC_softseg.json index ffe50aeddb..cd8b25c2e5 100644 --- a/derivatives/labels_softseg/sub-mniS09/anat/sub-mniS09_space-other_T2star_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-mniS09/anat/sub-mniS09_space-other_T2star_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:29" + "Date": "2022-10-22 14:36:29", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-mniS09/anat/sub-mniS09_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-mniS09/anat/sub-mniS09_space-other_T2w_label-SC_softseg.json index ffe50aeddb..3ca3b7bd82 100644 --- a/derivatives/labels_softseg/sub-mniS09/anat/sub-mniS09_space-other_T2w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-mniS09/anat/sub-mniS09_space-other_T2w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:29" + "Date": "2022-10-22 14:36:29", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-mountSinai01/anat/sub-mountSinai01_flip-1_mt-on_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-mountSinai01/anat/sub-mountSinai01_flip-1_mt-on_space-other_MTS_label-SC_softseg.json index ffe50aeddb..49a4cd4c40 100644 --- a/derivatives/labels_softseg/sub-mountSinai01/anat/sub-mountSinai01_flip-1_mt-on_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-mountSinai01/anat/sub-mountSinai01_flip-1_mt-on_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:29" + "Date": "2022-10-22 14:36:29", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-mountSinai01/anat/sub-mountSinai01_flip-2_mt-off_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-mountSinai01/anat/sub-mountSinai01_flip-2_mt-off_space-other_MTS_label-SC_softseg.json index ffe50aeddb..49a4cd4c40 100644 --- a/derivatives/labels_softseg/sub-mountSinai01/anat/sub-mountSinai01_flip-2_mt-off_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-mountSinai01/anat/sub-mountSinai01_flip-2_mt-off_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:29" + "Date": "2022-10-22 14:36:29", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-mountSinai01/anat/sub-mountSinai01_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-mountSinai01/anat/sub-mountSinai01_space-other_T1w_label-SC_softseg.json index ffe50aeddb..f6646b0059 100644 --- a/derivatives/labels_softseg/sub-mountSinai01/anat/sub-mountSinai01_space-other_T1w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-mountSinai01/anat/sub-mountSinai01_space-other_T1w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:29" + "Date": "2022-10-22 14:36:29", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-mountSinai01/anat/sub-mountSinai01_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-mountSinai01/anat/sub-mountSinai01_space-other_T2star_label-SC_softseg.json index ffe50aeddb..cd8b25c2e5 100644 --- a/derivatives/labels_softseg/sub-mountSinai01/anat/sub-mountSinai01_space-other_T2star_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-mountSinai01/anat/sub-mountSinai01_space-other_T2star_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:29" + "Date": "2022-10-22 14:36:29", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-mountSinai01/anat/sub-mountSinai01_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-mountSinai01/anat/sub-mountSinai01_space-other_T2w_label-SC_softseg.json index ffe50aeddb..3ca3b7bd82 100644 --- a/derivatives/labels_softseg/sub-mountSinai01/anat/sub-mountSinai01_space-other_T2w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-mountSinai01/anat/sub-mountSinai01_space-other_T2w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:29" + "Date": "2022-10-22 14:36:29", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-mountSinai02/anat/sub-mountSinai02_flip-1_mt-on_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-mountSinai02/anat/sub-mountSinai02_flip-1_mt-on_space-other_MTS_label-SC_softseg.json index ffe50aeddb..49a4cd4c40 100644 --- a/derivatives/labels_softseg/sub-mountSinai02/anat/sub-mountSinai02_flip-1_mt-on_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-mountSinai02/anat/sub-mountSinai02_flip-1_mt-on_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:29" + "Date": "2022-10-22 14:36:29", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-mountSinai02/anat/sub-mountSinai02_flip-2_mt-off_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-mountSinai02/anat/sub-mountSinai02_flip-2_mt-off_space-other_MTS_label-SC_softseg.json index ffe50aeddb..49a4cd4c40 100644 --- a/derivatives/labels_softseg/sub-mountSinai02/anat/sub-mountSinai02_flip-2_mt-off_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-mountSinai02/anat/sub-mountSinai02_flip-2_mt-off_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:29" + "Date": "2022-10-22 14:36:29", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-mountSinai02/anat/sub-mountSinai02_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-mountSinai02/anat/sub-mountSinai02_space-other_T1w_label-SC_softseg.json index ffe50aeddb..f6646b0059 100644 --- a/derivatives/labels_softseg/sub-mountSinai02/anat/sub-mountSinai02_space-other_T1w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-mountSinai02/anat/sub-mountSinai02_space-other_T1w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:29" + "Date": "2022-10-22 14:36:29", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-mountSinai02/anat/sub-mountSinai02_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-mountSinai02/anat/sub-mountSinai02_space-other_T2star_label-SC_softseg.json index ffe50aeddb..cd8b25c2e5 100644 --- a/derivatives/labels_softseg/sub-mountSinai02/anat/sub-mountSinai02_space-other_T2star_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-mountSinai02/anat/sub-mountSinai02_space-other_T2star_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:29" + "Date": "2022-10-22 14:36:29", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-mountSinai02/anat/sub-mountSinai02_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-mountSinai02/anat/sub-mountSinai02_space-other_T2w_label-SC_softseg.json index ffe50aeddb..3ca3b7bd82 100644 --- a/derivatives/labels_softseg/sub-mountSinai02/anat/sub-mountSinai02_space-other_T2w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-mountSinai02/anat/sub-mountSinai02_space-other_T2w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:29" + "Date": "2022-10-22 14:36:29", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-mountSinai04/anat/sub-mountSinai04_flip-1_mt-on_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-mountSinai04/anat/sub-mountSinai04_flip-1_mt-on_space-other_MTS_label-SC_softseg.json index 48481e7812..4622d61854 100644 --- a/derivatives/labels_softseg/sub-mountSinai04/anat/sub-mountSinai04_flip-1_mt-on_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-mountSinai04/anat/sub-mountSinai04_flip-1_mt-on_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:30" + "Date": "2022-10-22 14:36:30", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-mountSinai04/anat/sub-mountSinai04_flip-2_mt-off_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-mountSinai04/anat/sub-mountSinai04_flip-2_mt-off_space-other_MTS_label-SC_softseg.json index 48481e7812..4622d61854 100644 --- a/derivatives/labels_softseg/sub-mountSinai04/anat/sub-mountSinai04_flip-2_mt-off_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-mountSinai04/anat/sub-mountSinai04_flip-2_mt-off_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:30" + "Date": "2022-10-22 14:36:30", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-mountSinai04/anat/sub-mountSinai04_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-mountSinai04/anat/sub-mountSinai04_space-other_T1w_label-SC_softseg.json index 48481e7812..79ff860e6c 100644 --- a/derivatives/labels_softseg/sub-mountSinai04/anat/sub-mountSinai04_space-other_T1w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-mountSinai04/anat/sub-mountSinai04_space-other_T1w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:30" + "Date": "2022-10-22 14:36:30", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-mountSinai04/anat/sub-mountSinai04_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-mountSinai04/anat/sub-mountSinai04_space-other_T2star_label-SC_softseg.json index 48481e7812..13e846286e 100644 --- a/derivatives/labels_softseg/sub-mountSinai04/anat/sub-mountSinai04_space-other_T2star_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-mountSinai04/anat/sub-mountSinai04_space-other_T2star_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:30" + "Date": "2022-10-22 14:36:30", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-mountSinai04/anat/sub-mountSinai04_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-mountSinai04/anat/sub-mountSinai04_space-other_T2w_label-SC_softseg.json index 48481e7812..42d532c9d8 100644 --- a/derivatives/labels_softseg/sub-mountSinai04/anat/sub-mountSinai04_space-other_T2w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-mountSinai04/anat/sub-mountSinai04_space-other_T2w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:30" + "Date": "2022-10-22 14:36:30", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-mountSinai05/anat/sub-mountSinai05_flip-1_mt-on_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-mountSinai05/anat/sub-mountSinai05_flip-1_mt-on_space-other_MTS_label-SC_softseg.json index 48481e7812..4622d61854 100644 --- a/derivatives/labels_softseg/sub-mountSinai05/anat/sub-mountSinai05_flip-1_mt-on_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-mountSinai05/anat/sub-mountSinai05_flip-1_mt-on_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:30" + "Date": "2022-10-22 14:36:30", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-mountSinai05/anat/sub-mountSinai05_flip-2_mt-off_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-mountSinai05/anat/sub-mountSinai05_flip-2_mt-off_space-other_MTS_label-SC_softseg.json index 48481e7812..4622d61854 100644 --- a/derivatives/labels_softseg/sub-mountSinai05/anat/sub-mountSinai05_flip-2_mt-off_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-mountSinai05/anat/sub-mountSinai05_flip-2_mt-off_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:30" + "Date": "2022-10-22 14:36:30", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-mountSinai05/anat/sub-mountSinai05_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-mountSinai05/anat/sub-mountSinai05_space-other_T1w_label-SC_softseg.json index 48481e7812..79ff860e6c 100644 --- a/derivatives/labels_softseg/sub-mountSinai05/anat/sub-mountSinai05_space-other_T1w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-mountSinai05/anat/sub-mountSinai05_space-other_T1w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:30" + "Date": "2022-10-22 14:36:30", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-mountSinai05/anat/sub-mountSinai05_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-mountSinai05/anat/sub-mountSinai05_space-other_T2star_label-SC_softseg.json index 48481e7812..13e846286e 100644 --- a/derivatives/labels_softseg/sub-mountSinai05/anat/sub-mountSinai05_space-other_T2star_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-mountSinai05/anat/sub-mountSinai05_space-other_T2star_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:30" + "Date": "2022-10-22 14:36:30", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-mountSinai05/anat/sub-mountSinai05_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-mountSinai05/anat/sub-mountSinai05_space-other_T2w_label-SC_softseg.json index 48481e7812..42d532c9d8 100644 --- a/derivatives/labels_softseg/sub-mountSinai05/anat/sub-mountSinai05_space-other_T2w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-mountSinai05/anat/sub-mountSinai05_space-other_T2w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:30" + "Date": "2022-10-22 14:36:30", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-mountSinai06/anat/sub-mountSinai06_flip-1_mt-on_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-mountSinai06/anat/sub-mountSinai06_flip-1_mt-on_space-other_MTS_label-SC_softseg.json index 48481e7812..4622d61854 100644 --- a/derivatives/labels_softseg/sub-mountSinai06/anat/sub-mountSinai06_flip-1_mt-on_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-mountSinai06/anat/sub-mountSinai06_flip-1_mt-on_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:30" + "Date": "2022-10-22 14:36:30", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-mountSinai06/anat/sub-mountSinai06_flip-2_mt-off_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-mountSinai06/anat/sub-mountSinai06_flip-2_mt-off_space-other_MTS_label-SC_softseg.json index 48481e7812..4622d61854 100644 --- a/derivatives/labels_softseg/sub-mountSinai06/anat/sub-mountSinai06_flip-2_mt-off_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-mountSinai06/anat/sub-mountSinai06_flip-2_mt-off_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:30" + "Date": "2022-10-22 14:36:30", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-mountSinai06/anat/sub-mountSinai06_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-mountSinai06/anat/sub-mountSinai06_space-other_T1w_label-SC_softseg.json index 48481e7812..79ff860e6c 100644 --- a/derivatives/labels_softseg/sub-mountSinai06/anat/sub-mountSinai06_space-other_T1w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-mountSinai06/anat/sub-mountSinai06_space-other_T1w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:30" + "Date": "2022-10-22 14:36:30", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-mountSinai06/anat/sub-mountSinai06_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-mountSinai06/anat/sub-mountSinai06_space-other_T2star_label-SC_softseg.json index 48481e7812..13e846286e 100644 --- a/derivatives/labels_softseg/sub-mountSinai06/anat/sub-mountSinai06_space-other_T2star_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-mountSinai06/anat/sub-mountSinai06_space-other_T2star_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:30" + "Date": "2022-10-22 14:36:30", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-mountSinai06/anat/sub-mountSinai06_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-mountSinai06/anat/sub-mountSinai06_space-other_T2w_label-SC_softseg.json index 48481e7812..42d532c9d8 100644 --- a/derivatives/labels_softseg/sub-mountSinai06/anat/sub-mountSinai06_space-other_T2w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-mountSinai06/anat/sub-mountSinai06_space-other_T2w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:30" + "Date": "2022-10-22 14:36:30", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-mpicbs01/anat/sub-mpicbs01_flip-1_mt-on_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-mpicbs01/anat/sub-mpicbs01_flip-1_mt-on_space-other_MTS_label-SC_softseg.json index 48481e7812..4622d61854 100644 --- a/derivatives/labels_softseg/sub-mpicbs01/anat/sub-mpicbs01_flip-1_mt-on_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-mpicbs01/anat/sub-mpicbs01_flip-1_mt-on_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:30" + "Date": "2022-10-22 14:36:30", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-mpicbs01/anat/sub-mpicbs01_flip-2_mt-off_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-mpicbs01/anat/sub-mpicbs01_flip-2_mt-off_space-other_MTS_label-SC_softseg.json index 48481e7812..4622d61854 100644 --- a/derivatives/labels_softseg/sub-mpicbs01/anat/sub-mpicbs01_flip-2_mt-off_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-mpicbs01/anat/sub-mpicbs01_flip-2_mt-off_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:30" + "Date": "2022-10-22 14:36:30", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-mpicbs01/anat/sub-mpicbs01_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-mpicbs01/anat/sub-mpicbs01_space-other_T1w_label-SC_softseg.json index 48481e7812..79ff860e6c 100644 --- a/derivatives/labels_softseg/sub-mpicbs01/anat/sub-mpicbs01_space-other_T1w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-mpicbs01/anat/sub-mpicbs01_space-other_T1w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:30" + "Date": "2022-10-22 14:36:30", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-mpicbs01/anat/sub-mpicbs01_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-mpicbs01/anat/sub-mpicbs01_space-other_T2star_label-SC_softseg.json index 48481e7812..13e846286e 100644 --- a/derivatives/labels_softseg/sub-mpicbs01/anat/sub-mpicbs01_space-other_T2star_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-mpicbs01/anat/sub-mpicbs01_space-other_T2star_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:30" + "Date": "2022-10-22 14:36:30", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-mpicbs01/anat/sub-mpicbs01_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-mpicbs01/anat/sub-mpicbs01_space-other_T2w_label-SC_softseg.json index 48481e7812..42d532c9d8 100644 --- a/derivatives/labels_softseg/sub-mpicbs01/anat/sub-mpicbs01_space-other_T2w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-mpicbs01/anat/sub-mpicbs01_space-other_T2w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:30" + "Date": "2022-10-22 14:36:30", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-mpicbs02/anat/sub-mpicbs02_flip-1_mt-on_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-mpicbs02/anat/sub-mpicbs02_flip-1_mt-on_space-other_MTS_label-SC_softseg.json index ea20796b63..bbe16d664f 100644 --- a/derivatives/labels_softseg/sub-mpicbs02/anat/sub-mpicbs02_flip-1_mt-on_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-mpicbs02/anat/sub-mpicbs02_flip-1_mt-on_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:31" + "Date": "2022-10-22 14:36:31", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-mpicbs02/anat/sub-mpicbs02_flip-2_mt-off_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-mpicbs02/anat/sub-mpicbs02_flip-2_mt-off_space-other_MTS_label-SC_softseg.json index ea20796b63..bbe16d664f 100644 --- a/derivatives/labels_softseg/sub-mpicbs02/anat/sub-mpicbs02_flip-2_mt-off_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-mpicbs02/anat/sub-mpicbs02_flip-2_mt-off_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:31" + "Date": "2022-10-22 14:36:31", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-mpicbs02/anat/sub-mpicbs02_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-mpicbs02/anat/sub-mpicbs02_space-other_T1w_label-SC_softseg.json index ea20796b63..c70846a627 100644 --- a/derivatives/labels_softseg/sub-mpicbs02/anat/sub-mpicbs02_space-other_T1w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-mpicbs02/anat/sub-mpicbs02_space-other_T1w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:31" + "Date": "2022-10-22 14:36:31", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-mpicbs02/anat/sub-mpicbs02_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-mpicbs02/anat/sub-mpicbs02_space-other_T2star_label-SC_softseg.json index ea20796b63..cf5cdeaef7 100644 --- a/derivatives/labels_softseg/sub-mpicbs02/anat/sub-mpicbs02_space-other_T2star_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-mpicbs02/anat/sub-mpicbs02_space-other_T2star_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:31" + "Date": "2022-10-22 14:36:31", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-mpicbs02/anat/sub-mpicbs02_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-mpicbs02/anat/sub-mpicbs02_space-other_T2w_label-SC_softseg.json index ea20796b63..f5f4093ec6 100644 --- a/derivatives/labels_softseg/sub-mpicbs02/anat/sub-mpicbs02_space-other_T2w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-mpicbs02/anat/sub-mpicbs02_space-other_T2w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:31" + "Date": "2022-10-22 14:36:31", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-mpicbs03/anat/sub-mpicbs03_flip-1_mt-on_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-mpicbs03/anat/sub-mpicbs03_flip-1_mt-on_space-other_MTS_label-SC_softseg.json index ea20796b63..bbe16d664f 100644 --- a/derivatives/labels_softseg/sub-mpicbs03/anat/sub-mpicbs03_flip-1_mt-on_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-mpicbs03/anat/sub-mpicbs03_flip-1_mt-on_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:31" + "Date": "2022-10-22 14:36:31", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-mpicbs03/anat/sub-mpicbs03_flip-2_mt-off_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-mpicbs03/anat/sub-mpicbs03_flip-2_mt-off_space-other_MTS_label-SC_softseg.json index ea20796b63..bbe16d664f 100644 --- a/derivatives/labels_softseg/sub-mpicbs03/anat/sub-mpicbs03_flip-2_mt-off_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-mpicbs03/anat/sub-mpicbs03_flip-2_mt-off_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:31" + "Date": "2022-10-22 14:36:31", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-mpicbs03/anat/sub-mpicbs03_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-mpicbs03/anat/sub-mpicbs03_space-other_T1w_label-SC_softseg.json index ea20796b63..c70846a627 100644 --- a/derivatives/labels_softseg/sub-mpicbs03/anat/sub-mpicbs03_space-other_T1w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-mpicbs03/anat/sub-mpicbs03_space-other_T1w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:31" + "Date": "2022-10-22 14:36:31", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-mpicbs03/anat/sub-mpicbs03_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-mpicbs03/anat/sub-mpicbs03_space-other_T2star_label-SC_softseg.json index ea20796b63..cf5cdeaef7 100644 --- a/derivatives/labels_softseg/sub-mpicbs03/anat/sub-mpicbs03_space-other_T2star_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-mpicbs03/anat/sub-mpicbs03_space-other_T2star_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:31" + "Date": "2022-10-22 14:36:31", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-mpicbs03/anat/sub-mpicbs03_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-mpicbs03/anat/sub-mpicbs03_space-other_T2w_label-SC_softseg.json index ea20796b63..f5f4093ec6 100644 --- a/derivatives/labels_softseg/sub-mpicbs03/anat/sub-mpicbs03_space-other_T2w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-mpicbs03/anat/sub-mpicbs03_space-other_T2w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:31" + "Date": "2022-10-22 14:36:31", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-mpicbs05/anat/sub-mpicbs05_flip-1_mt-on_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-mpicbs05/anat/sub-mpicbs05_flip-1_mt-on_space-other_MTS_label-SC_softseg.json index ea20796b63..bbe16d664f 100644 --- a/derivatives/labels_softseg/sub-mpicbs05/anat/sub-mpicbs05_flip-1_mt-on_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-mpicbs05/anat/sub-mpicbs05_flip-1_mt-on_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:31" + "Date": "2022-10-22 14:36:31", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-mpicbs05/anat/sub-mpicbs05_flip-2_mt-off_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-mpicbs05/anat/sub-mpicbs05_flip-2_mt-off_space-other_MTS_label-SC_softseg.json index ea20796b63..bbe16d664f 100644 --- a/derivatives/labels_softseg/sub-mpicbs05/anat/sub-mpicbs05_flip-2_mt-off_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-mpicbs05/anat/sub-mpicbs05_flip-2_mt-off_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:31" + "Date": "2022-10-22 14:36:31", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-mpicbs05/anat/sub-mpicbs05_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-mpicbs05/anat/sub-mpicbs05_space-other_T1w_label-SC_softseg.json index ea20796b63..c70846a627 100644 --- a/derivatives/labels_softseg/sub-mpicbs05/anat/sub-mpicbs05_space-other_T1w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-mpicbs05/anat/sub-mpicbs05_space-other_T1w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:31" + "Date": "2022-10-22 14:36:31", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-mpicbs05/anat/sub-mpicbs05_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-mpicbs05/anat/sub-mpicbs05_space-other_T2star_label-SC_softseg.json index ea20796b63..cf5cdeaef7 100644 --- a/derivatives/labels_softseg/sub-mpicbs05/anat/sub-mpicbs05_space-other_T2star_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-mpicbs05/anat/sub-mpicbs05_space-other_T2star_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:31" + "Date": "2022-10-22 14:36:31", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-mpicbs05/anat/sub-mpicbs05_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-mpicbs05/anat/sub-mpicbs05_space-other_T2w_label-SC_softseg.json index ea20796b63..f5f4093ec6 100644 --- a/derivatives/labels_softseg/sub-mpicbs05/anat/sub-mpicbs05_space-other_T2w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-mpicbs05/anat/sub-mpicbs05_space-other_T2w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:31" + "Date": "2022-10-22 14:36:31", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-mpicbs06/anat/sub-mpicbs06_flip-1_mt-on_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-mpicbs06/anat/sub-mpicbs06_flip-1_mt-on_space-other_MTS_label-SC_softseg.json index aa0f5abf87..fde4070eba 100644 --- a/derivatives/labels_softseg/sub-mpicbs06/anat/sub-mpicbs06_flip-1_mt-on_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-mpicbs06/anat/sub-mpicbs06_flip-1_mt-on_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:32" + "Date": "2022-10-22 14:36:32", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-mpicbs06/anat/sub-mpicbs06_flip-2_mt-off_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-mpicbs06/anat/sub-mpicbs06_flip-2_mt-off_space-other_MTS_label-SC_softseg.json index aa0f5abf87..fde4070eba 100644 --- a/derivatives/labels_softseg/sub-mpicbs06/anat/sub-mpicbs06_flip-2_mt-off_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-mpicbs06/anat/sub-mpicbs06_flip-2_mt-off_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:32" + "Date": "2022-10-22 14:36:32", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-mpicbs06/anat/sub-mpicbs06_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-mpicbs06/anat/sub-mpicbs06_space-other_T1w_label-SC_softseg.json index aa0f5abf87..58cfdeeea6 100644 --- a/derivatives/labels_softseg/sub-mpicbs06/anat/sub-mpicbs06_space-other_T1w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-mpicbs06/anat/sub-mpicbs06_space-other_T1w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:32" + "Date": "2022-10-22 14:36:32", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-mpicbs06/anat/sub-mpicbs06_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-mpicbs06/anat/sub-mpicbs06_space-other_T2star_label-SC_softseg.json index aa0f5abf87..d7d971187e 100644 --- a/derivatives/labels_softseg/sub-mpicbs06/anat/sub-mpicbs06_space-other_T2star_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-mpicbs06/anat/sub-mpicbs06_space-other_T2star_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:32" + "Date": "2022-10-22 14:36:32", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-mpicbs06/anat/sub-mpicbs06_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-mpicbs06/anat/sub-mpicbs06_space-other_T2w_label-SC_softseg.json index aa0f5abf87..3c115eafdb 100644 --- a/derivatives/labels_softseg/sub-mpicbs06/anat/sub-mpicbs06_space-other_T2w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-mpicbs06/anat/sub-mpicbs06_space-other_T2w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:32" + "Date": "2022-10-22 14:36:32", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-mpicbs07/anat/sub-mpicbs07_flip-1_mt-on_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-mpicbs07/anat/sub-mpicbs07_flip-1_mt-on_space-other_MTS_label-SC_softseg.json index aa0f5abf87..fde4070eba 100644 --- a/derivatives/labels_softseg/sub-mpicbs07/anat/sub-mpicbs07_flip-1_mt-on_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-mpicbs07/anat/sub-mpicbs07_flip-1_mt-on_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:32" + "Date": "2022-10-22 14:36:32", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-mpicbs07/anat/sub-mpicbs07_flip-2_mt-off_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-mpicbs07/anat/sub-mpicbs07_flip-2_mt-off_space-other_MTS_label-SC_softseg.json index aa0f5abf87..fde4070eba 100644 --- a/derivatives/labels_softseg/sub-mpicbs07/anat/sub-mpicbs07_flip-2_mt-off_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-mpicbs07/anat/sub-mpicbs07_flip-2_mt-off_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:32" + "Date": "2022-10-22 14:36:32", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-mpicbs07/anat/sub-mpicbs07_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-mpicbs07/anat/sub-mpicbs07_space-other_T1w_label-SC_softseg.json index aa0f5abf87..58cfdeeea6 100644 --- a/derivatives/labels_softseg/sub-mpicbs07/anat/sub-mpicbs07_space-other_T1w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-mpicbs07/anat/sub-mpicbs07_space-other_T1w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:32" + "Date": "2022-10-22 14:36:32", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-mpicbs07/anat/sub-mpicbs07_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-mpicbs07/anat/sub-mpicbs07_space-other_T2star_label-SC_softseg.json index aa0f5abf87..d7d971187e 100644 --- a/derivatives/labels_softseg/sub-mpicbs07/anat/sub-mpicbs07_space-other_T2star_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-mpicbs07/anat/sub-mpicbs07_space-other_T2star_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:32" + "Date": "2022-10-22 14:36:32", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-mpicbs07/anat/sub-mpicbs07_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-mpicbs07/anat/sub-mpicbs07_space-other_T2w_label-SC_softseg.json index aa0f5abf87..3c115eafdb 100644 --- a/derivatives/labels_softseg/sub-mpicbs07/anat/sub-mpicbs07_space-other_T2w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-mpicbs07/anat/sub-mpicbs07_space-other_T2w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:32" + "Date": "2022-10-22 14:36:32", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-nottwil01/anat/sub-nottwil01_flip-1_mt-on_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-nottwil01/anat/sub-nottwil01_flip-1_mt-on_space-other_MTS_label-SC_softseg.json index aa0f5abf87..fde4070eba 100644 --- a/derivatives/labels_softseg/sub-nottwil01/anat/sub-nottwil01_flip-1_mt-on_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-nottwil01/anat/sub-nottwil01_flip-1_mt-on_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:32" + "Date": "2022-10-22 14:36:32", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-nottwil01/anat/sub-nottwil01_flip-2_mt-off_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-nottwil01/anat/sub-nottwil01_flip-2_mt-off_space-other_MTS_label-SC_softseg.json index aa0f5abf87..fde4070eba 100644 --- a/derivatives/labels_softseg/sub-nottwil01/anat/sub-nottwil01_flip-2_mt-off_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-nottwil01/anat/sub-nottwil01_flip-2_mt-off_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:32" + "Date": "2022-10-22 14:36:32", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-nottwil01/anat/sub-nottwil01_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-nottwil01/anat/sub-nottwil01_space-other_T1w_label-SC_softseg.json index aa0f5abf87..58cfdeeea6 100644 --- a/derivatives/labels_softseg/sub-nottwil01/anat/sub-nottwil01_space-other_T1w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-nottwil01/anat/sub-nottwil01_space-other_T1w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:32" + "Date": "2022-10-22 14:36:32", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-nottwil01/anat/sub-nottwil01_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-nottwil01/anat/sub-nottwil01_space-other_T2star_label-SC_softseg.json index aa0f5abf87..d7d971187e 100644 --- a/derivatives/labels_softseg/sub-nottwil01/anat/sub-nottwil01_space-other_T2star_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-nottwil01/anat/sub-nottwil01_space-other_T2star_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:32" + "Date": "2022-10-22 14:36:32", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-nottwil01/anat/sub-nottwil01_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-nottwil01/anat/sub-nottwil01_space-other_T2w_label-SC_softseg.json index aa0f5abf87..3c115eafdb 100644 --- a/derivatives/labels_softseg/sub-nottwil01/anat/sub-nottwil01_space-other_T2w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-nottwil01/anat/sub-nottwil01_space-other_T2w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:32" + "Date": "2022-10-22 14:36:32", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-nottwil02/anat/sub-nottwil02_flip-1_mt-on_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-nottwil02/anat/sub-nottwil02_flip-1_mt-on_space-other_MTS_label-SC_softseg.json index aa0f5abf87..fde4070eba 100644 --- a/derivatives/labels_softseg/sub-nottwil02/anat/sub-nottwil02_flip-1_mt-on_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-nottwil02/anat/sub-nottwil02_flip-1_mt-on_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:32" + "Date": "2022-10-22 14:36:32", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-nottwil02/anat/sub-nottwil02_flip-2_mt-off_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-nottwil02/anat/sub-nottwil02_flip-2_mt-off_space-other_MTS_label-SC_softseg.json index aa0f5abf87..fde4070eba 100644 --- a/derivatives/labels_softseg/sub-nottwil02/anat/sub-nottwil02_flip-2_mt-off_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-nottwil02/anat/sub-nottwil02_flip-2_mt-off_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:32" + "Date": "2022-10-22 14:36:32", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-nottwil02/anat/sub-nottwil02_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-nottwil02/anat/sub-nottwil02_space-other_T1w_label-SC_softseg.json index aa0f5abf87..58cfdeeea6 100644 --- a/derivatives/labels_softseg/sub-nottwil02/anat/sub-nottwil02_space-other_T1w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-nottwil02/anat/sub-nottwil02_space-other_T1w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:32" + "Date": "2022-10-22 14:36:32", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-nottwil02/anat/sub-nottwil02_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-nottwil02/anat/sub-nottwil02_space-other_T2star_label-SC_softseg.json index 09fb2b06c7..dffadbfef5 100644 --- a/derivatives/labels_softseg/sub-nottwil02/anat/sub-nottwil02_space-other_T2star_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-nottwil02/anat/sub-nottwil02_space-other_T2star_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:33" + "Date": "2022-10-22 14:36:33", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-nottwil02/anat/sub-nottwil02_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-nottwil02/anat/sub-nottwil02_space-other_T2w_label-SC_softseg.json index 09fb2b06c7..c8e383258d 100644 --- a/derivatives/labels_softseg/sub-nottwil02/anat/sub-nottwil02_space-other_T2w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-nottwil02/anat/sub-nottwil02_space-other_T2w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:33" + "Date": "2022-10-22 14:36:33", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-nottwil03/anat/sub-nottwil03_flip-1_mt-on_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-nottwil03/anat/sub-nottwil03_flip-1_mt-on_space-other_MTS_label-SC_softseg.json index 09fb2b06c7..cdca1220a9 100644 --- a/derivatives/labels_softseg/sub-nottwil03/anat/sub-nottwil03_flip-1_mt-on_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-nottwil03/anat/sub-nottwil03_flip-1_mt-on_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:33" + "Date": "2022-10-22 14:36:33", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-nottwil03/anat/sub-nottwil03_flip-2_mt-off_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-nottwil03/anat/sub-nottwil03_flip-2_mt-off_space-other_MTS_label-SC_softseg.json index 09fb2b06c7..cdca1220a9 100644 --- a/derivatives/labels_softseg/sub-nottwil03/anat/sub-nottwil03_flip-2_mt-off_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-nottwil03/anat/sub-nottwil03_flip-2_mt-off_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:33" + "Date": "2022-10-22 14:36:33", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-nottwil03/anat/sub-nottwil03_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-nottwil03/anat/sub-nottwil03_space-other_T1w_label-SC_softseg.json index 09fb2b06c7..2f00d7c9e7 100644 --- a/derivatives/labels_softseg/sub-nottwil03/anat/sub-nottwil03_space-other_T1w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-nottwil03/anat/sub-nottwil03_space-other_T1w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:33" + "Date": "2022-10-22 14:36:33", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-nottwil03/anat/sub-nottwil03_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-nottwil03/anat/sub-nottwil03_space-other_T2star_label-SC_softseg.json index 09fb2b06c7..dffadbfef5 100644 --- a/derivatives/labels_softseg/sub-nottwil03/anat/sub-nottwil03_space-other_T2star_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-nottwil03/anat/sub-nottwil03_space-other_T2star_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:33" + "Date": "2022-10-22 14:36:33", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-nottwil03/anat/sub-nottwil03_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-nottwil03/anat/sub-nottwil03_space-other_T2w_label-SC_softseg.json index 09fb2b06c7..c8e383258d 100644 --- a/derivatives/labels_softseg/sub-nottwil03/anat/sub-nottwil03_space-other_T2w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-nottwil03/anat/sub-nottwil03_space-other_T2w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:33" + "Date": "2022-10-22 14:36:33", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-nottwil04/anat/sub-nottwil04_flip-1_mt-on_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-nottwil04/anat/sub-nottwil04_flip-1_mt-on_space-other_MTS_label-SC_softseg.json index 09fb2b06c7..cdca1220a9 100644 --- a/derivatives/labels_softseg/sub-nottwil04/anat/sub-nottwil04_flip-1_mt-on_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-nottwil04/anat/sub-nottwil04_flip-1_mt-on_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:33" + "Date": "2022-10-22 14:36:33", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-nottwil04/anat/sub-nottwil04_flip-2_mt-off_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-nottwil04/anat/sub-nottwil04_flip-2_mt-off_space-other_MTS_label-SC_softseg.json index 09fb2b06c7..cdca1220a9 100644 --- a/derivatives/labels_softseg/sub-nottwil04/anat/sub-nottwil04_flip-2_mt-off_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-nottwil04/anat/sub-nottwil04_flip-2_mt-off_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:33" + "Date": "2022-10-22 14:36:33", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-nottwil04/anat/sub-nottwil04_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-nottwil04/anat/sub-nottwil04_space-other_T1w_label-SC_softseg.json index 09fb2b06c7..2f00d7c9e7 100644 --- a/derivatives/labels_softseg/sub-nottwil04/anat/sub-nottwil04_space-other_T1w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-nottwil04/anat/sub-nottwil04_space-other_T1w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:33" + "Date": "2022-10-22 14:36:33", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-nottwil04/anat/sub-nottwil04_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-nottwil04/anat/sub-nottwil04_space-other_T2star_label-SC_softseg.json index 09fb2b06c7..dffadbfef5 100644 --- a/derivatives/labels_softseg/sub-nottwil04/anat/sub-nottwil04_space-other_T2star_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-nottwil04/anat/sub-nottwil04_space-other_T2star_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:33" + "Date": "2022-10-22 14:36:33", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-nottwil04/anat/sub-nottwil04_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-nottwil04/anat/sub-nottwil04_space-other_T2w_label-SC_softseg.json index 09fb2b06c7..c8e383258d 100644 --- a/derivatives/labels_softseg/sub-nottwil04/anat/sub-nottwil04_space-other_T2w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-nottwil04/anat/sub-nottwil04_space-other_T2w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:33" + "Date": "2022-10-22 14:36:33", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-nottwil05/anat/sub-nottwil05_flip-1_mt-on_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-nottwil05/anat/sub-nottwil05_flip-1_mt-on_space-other_MTS_label-SC_softseg.json index 09fb2b06c7..cdca1220a9 100644 --- a/derivatives/labels_softseg/sub-nottwil05/anat/sub-nottwil05_flip-1_mt-on_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-nottwil05/anat/sub-nottwil05_flip-1_mt-on_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:33" + "Date": "2022-10-22 14:36:33", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-nottwil05/anat/sub-nottwil05_flip-2_mt-off_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-nottwil05/anat/sub-nottwil05_flip-2_mt-off_space-other_MTS_label-SC_softseg.json index 09fb2b06c7..cdca1220a9 100644 --- a/derivatives/labels_softseg/sub-nottwil05/anat/sub-nottwil05_flip-2_mt-off_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-nottwil05/anat/sub-nottwil05_flip-2_mt-off_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:33" + "Date": "2022-10-22 14:36:33", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-nottwil05/anat/sub-nottwil05_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-nottwil05/anat/sub-nottwil05_space-other_T1w_label-SC_softseg.json index 09fb2b06c7..2f00d7c9e7 100644 --- a/derivatives/labels_softseg/sub-nottwil05/anat/sub-nottwil05_space-other_T1w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-nottwil05/anat/sub-nottwil05_space-other_T1w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:33" + "Date": "2022-10-22 14:36:33", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-nottwil05/anat/sub-nottwil05_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-nottwil05/anat/sub-nottwil05_space-other_T2star_label-SC_softseg.json index 09fb2b06c7..dffadbfef5 100644 --- a/derivatives/labels_softseg/sub-nottwil05/anat/sub-nottwil05_space-other_T2star_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-nottwil05/anat/sub-nottwil05_space-other_T2star_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:33" + "Date": "2022-10-22 14:36:33", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-nottwil05/anat/sub-nottwil05_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-nottwil05/anat/sub-nottwil05_space-other_T2w_label-SC_softseg.json index 09fb2b06c7..c8e383258d 100644 --- a/derivatives/labels_softseg/sub-nottwil05/anat/sub-nottwil05_space-other_T2w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-nottwil05/anat/sub-nottwil05_space-other_T2w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:33" + "Date": "2022-10-22 14:36:33", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-nottwil06/anat/sub-nottwil06_flip-1_mt-on_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-nottwil06/anat/sub-nottwil06_flip-1_mt-on_space-other_MTS_label-SC_softseg.json index 09fb2b06c7..cdca1220a9 100644 --- a/derivatives/labels_softseg/sub-nottwil06/anat/sub-nottwil06_flip-1_mt-on_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-nottwil06/anat/sub-nottwil06_flip-1_mt-on_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:33" + "Date": "2022-10-22 14:36:33", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-nottwil06/anat/sub-nottwil06_flip-2_mt-off_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-nottwil06/anat/sub-nottwil06_flip-2_mt-off_space-other_MTS_label-SC_softseg.json index 09fb2b06c7..cdca1220a9 100644 --- a/derivatives/labels_softseg/sub-nottwil06/anat/sub-nottwil06_flip-2_mt-off_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-nottwil06/anat/sub-nottwil06_flip-2_mt-off_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:33" + "Date": "2022-10-22 14:36:33", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-nottwil06/anat/sub-nottwil06_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-nottwil06/anat/sub-nottwil06_space-other_T1w_label-SC_softseg.json index 8eed774096..1c366c5294 100644 --- a/derivatives/labels_softseg/sub-nottwil06/anat/sub-nottwil06_space-other_T1w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-nottwil06/anat/sub-nottwil06_space-other_T1w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:34" + "Date": "2022-10-22 14:36:34", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-nottwil06/anat/sub-nottwil06_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-nottwil06/anat/sub-nottwil06_space-other_T2star_label-SC_softseg.json index 8eed774096..731738220c 100644 --- a/derivatives/labels_softseg/sub-nottwil06/anat/sub-nottwil06_space-other_T2star_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-nottwil06/anat/sub-nottwil06_space-other_T2star_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:34" + "Date": "2022-10-22 14:36:34", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-nottwil06/anat/sub-nottwil06_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-nottwil06/anat/sub-nottwil06_space-other_T2w_label-SC_softseg.json index 8eed774096..d441404268 100644 --- a/derivatives/labels_softseg/sub-nottwil06/anat/sub-nottwil06_space-other_T2w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-nottwil06/anat/sub-nottwil06_space-other_T2w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:34" + "Date": "2022-10-22 14:36:34", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-nwu01/anat/sub-nwu01_flip-1_mt-on_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-nwu01/anat/sub-nwu01_flip-1_mt-on_space-other_MTS_label-SC_softseg.json index 8eed774096..f76d236e16 100644 --- a/derivatives/labels_softseg/sub-nwu01/anat/sub-nwu01_flip-1_mt-on_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-nwu01/anat/sub-nwu01_flip-1_mt-on_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:34" + "Date": "2022-10-22 14:36:34", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-nwu01/anat/sub-nwu01_flip-2_mt-off_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-nwu01/anat/sub-nwu01_flip-2_mt-off_space-other_MTS_label-SC_softseg.json index 8eed774096..f76d236e16 100644 --- a/derivatives/labels_softseg/sub-nwu01/anat/sub-nwu01_flip-2_mt-off_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-nwu01/anat/sub-nwu01_flip-2_mt-off_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:34" + "Date": "2022-10-22 14:36:34", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-nwu01/anat/sub-nwu01_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-nwu01/anat/sub-nwu01_space-other_T1w_label-SC_softseg.json index 8eed774096..1c366c5294 100644 --- a/derivatives/labels_softseg/sub-nwu01/anat/sub-nwu01_space-other_T1w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-nwu01/anat/sub-nwu01_space-other_T1w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:34" + "Date": "2022-10-22 14:36:34", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-nwu01/anat/sub-nwu01_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-nwu01/anat/sub-nwu01_space-other_T2star_label-SC_softseg.json index 8eed774096..731738220c 100644 --- a/derivatives/labels_softseg/sub-nwu01/anat/sub-nwu01_space-other_T2star_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-nwu01/anat/sub-nwu01_space-other_T2star_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:34" + "Date": "2022-10-22 14:36:34", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-nwu01/anat/sub-nwu01_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-nwu01/anat/sub-nwu01_space-other_T2w_label-SC_softseg.json index 8eed774096..d441404268 100644 --- a/derivatives/labels_softseg/sub-nwu01/anat/sub-nwu01_space-other_T2w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-nwu01/anat/sub-nwu01_space-other_T2w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:34" + "Date": "2022-10-22 14:36:34", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-nwu02/anat/sub-nwu02_flip-1_mt-on_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-nwu02/anat/sub-nwu02_flip-1_mt-on_space-other_MTS_label-SC_softseg.json index 8eed774096..f76d236e16 100644 --- a/derivatives/labels_softseg/sub-nwu02/anat/sub-nwu02_flip-1_mt-on_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-nwu02/anat/sub-nwu02_flip-1_mt-on_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:34" + "Date": "2022-10-22 14:36:34", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-nwu02/anat/sub-nwu02_flip-2_mt-off_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-nwu02/anat/sub-nwu02_flip-2_mt-off_space-other_MTS_label-SC_softseg.json index 8eed774096..f76d236e16 100644 --- a/derivatives/labels_softseg/sub-nwu02/anat/sub-nwu02_flip-2_mt-off_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-nwu02/anat/sub-nwu02_flip-2_mt-off_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:34" + "Date": "2022-10-22 14:36:34", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-nwu02/anat/sub-nwu02_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-nwu02/anat/sub-nwu02_space-other_T1w_label-SC_softseg.json index 8eed774096..1c366c5294 100644 --- a/derivatives/labels_softseg/sub-nwu02/anat/sub-nwu02_space-other_T1w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-nwu02/anat/sub-nwu02_space-other_T1w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:34" + "Date": "2022-10-22 14:36:34", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-nwu02/anat/sub-nwu02_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-nwu02/anat/sub-nwu02_space-other_T2star_label-SC_softseg.json index 8eed774096..731738220c 100644 --- a/derivatives/labels_softseg/sub-nwu02/anat/sub-nwu02_space-other_T2star_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-nwu02/anat/sub-nwu02_space-other_T2star_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:34" + "Date": "2022-10-22 14:36:34", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-nwu02/anat/sub-nwu02_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-nwu02/anat/sub-nwu02_space-other_T2w_label-SC_softseg.json index 8eed774096..d441404268 100644 --- a/derivatives/labels_softseg/sub-nwu02/anat/sub-nwu02_space-other_T2w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-nwu02/anat/sub-nwu02_space-other_T2w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:34" + "Date": "2022-10-22 14:36:34", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-nwu03/anat/sub-nwu03_flip-1_mt-on_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-nwu03/anat/sub-nwu03_flip-1_mt-on_space-other_MTS_label-SC_softseg.json index 8eed774096..f76d236e16 100644 --- a/derivatives/labels_softseg/sub-nwu03/anat/sub-nwu03_flip-1_mt-on_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-nwu03/anat/sub-nwu03_flip-1_mt-on_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:34" + "Date": "2022-10-22 14:36:34", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-nwu03/anat/sub-nwu03_flip-2_mt-off_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-nwu03/anat/sub-nwu03_flip-2_mt-off_space-other_MTS_label-SC_softseg.json index 8eed774096..f76d236e16 100644 --- a/derivatives/labels_softseg/sub-nwu03/anat/sub-nwu03_flip-2_mt-off_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-nwu03/anat/sub-nwu03_flip-2_mt-off_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:34" + "Date": "2022-10-22 14:36:34", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-nwu03/anat/sub-nwu03_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-nwu03/anat/sub-nwu03_space-other_T1w_label-SC_softseg.json index 8eed774096..1c366c5294 100644 --- a/derivatives/labels_softseg/sub-nwu03/anat/sub-nwu03_space-other_T1w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-nwu03/anat/sub-nwu03_space-other_T1w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:34" + "Date": "2022-10-22 14:36:34", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-nwu03/anat/sub-nwu03_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-nwu03/anat/sub-nwu03_space-other_T2star_label-SC_softseg.json index 8eed774096..731738220c 100644 --- a/derivatives/labels_softseg/sub-nwu03/anat/sub-nwu03_space-other_T2star_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-nwu03/anat/sub-nwu03_space-other_T2star_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:34" + "Date": "2022-10-22 14:36:34", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-nwu03/anat/sub-nwu03_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-nwu03/anat/sub-nwu03_space-other_T2w_label-SC_softseg.json index 8eed774096..d441404268 100644 --- a/derivatives/labels_softseg/sub-nwu03/anat/sub-nwu03_space-other_T2w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-nwu03/anat/sub-nwu03_space-other_T2w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:34" + "Date": "2022-10-22 14:36:34", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-nwu04/anat/sub-nwu04_flip-1_mt-on_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-nwu04/anat/sub-nwu04_flip-1_mt-on_space-other_MTS_label-SC_softseg.json index 8eed774096..f76d236e16 100644 --- a/derivatives/labels_softseg/sub-nwu04/anat/sub-nwu04_flip-1_mt-on_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-nwu04/anat/sub-nwu04_flip-1_mt-on_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:34" + "Date": "2022-10-22 14:36:34", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-nwu04/anat/sub-nwu04_flip-2_mt-off_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-nwu04/anat/sub-nwu04_flip-2_mt-off_space-other_MTS_label-SC_softseg.json index 8eed774096..f76d236e16 100644 --- a/derivatives/labels_softseg/sub-nwu04/anat/sub-nwu04_flip-2_mt-off_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-nwu04/anat/sub-nwu04_flip-2_mt-off_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:34" + "Date": "2022-10-22 14:36:34", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-nwu04/anat/sub-nwu04_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-nwu04/anat/sub-nwu04_space-other_T1w_label-SC_softseg.json index 8eed774096..1c366c5294 100644 --- a/derivatives/labels_softseg/sub-nwu04/anat/sub-nwu04_space-other_T1w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-nwu04/anat/sub-nwu04_space-other_T1w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:34" + "Date": "2022-10-22 14:36:34", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-nwu04/anat/sub-nwu04_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-nwu04/anat/sub-nwu04_space-other_T2star_label-SC_softseg.json index 8eed774096..731738220c 100644 --- a/derivatives/labels_softseg/sub-nwu04/anat/sub-nwu04_space-other_T2star_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-nwu04/anat/sub-nwu04_space-other_T2star_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:34" + "Date": "2022-10-22 14:36:34", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-nwu04/anat/sub-nwu04_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-nwu04/anat/sub-nwu04_space-other_T2w_label-SC_softseg.json index 8eed774096..d441404268 100644 --- a/derivatives/labels_softseg/sub-nwu04/anat/sub-nwu04_space-other_T2w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-nwu04/anat/sub-nwu04_space-other_T2w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:34" + "Date": "2022-10-22 14:36:34", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-nwu05/anat/sub-nwu05_flip-1_mt-on_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-nwu05/anat/sub-nwu05_flip-1_mt-on_space-other_MTS_label-SC_softseg.json index 53cac6b3e5..f2f12e1281 100644 --- a/derivatives/labels_softseg/sub-nwu05/anat/sub-nwu05_flip-1_mt-on_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-nwu05/anat/sub-nwu05_flip-1_mt-on_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:35" + "Date": "2022-10-22 14:36:35", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-nwu05/anat/sub-nwu05_flip-2_mt-off_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-nwu05/anat/sub-nwu05_flip-2_mt-off_space-other_MTS_label-SC_softseg.json index 53cac6b3e5..f2f12e1281 100644 --- a/derivatives/labels_softseg/sub-nwu05/anat/sub-nwu05_flip-2_mt-off_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-nwu05/anat/sub-nwu05_flip-2_mt-off_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:35" + "Date": "2022-10-22 14:36:35", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-nwu05/anat/sub-nwu05_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-nwu05/anat/sub-nwu05_space-other_T1w_label-SC_softseg.json index 53cac6b3e5..e42be99ed3 100644 --- a/derivatives/labels_softseg/sub-nwu05/anat/sub-nwu05_space-other_T1w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-nwu05/anat/sub-nwu05_space-other_T1w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:35" + "Date": "2022-10-22 14:36:35", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-nwu05/anat/sub-nwu05_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-nwu05/anat/sub-nwu05_space-other_T2star_label-SC_softseg.json index 53cac6b3e5..2cf6386eab 100644 --- a/derivatives/labels_softseg/sub-nwu05/anat/sub-nwu05_space-other_T2star_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-nwu05/anat/sub-nwu05_space-other_T2star_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:35" + "Date": "2022-10-22 14:36:35", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-nwu05/anat/sub-nwu05_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-nwu05/anat/sub-nwu05_space-other_T2w_label-SC_softseg.json index 53cac6b3e5..310aebbd90 100644 --- a/derivatives/labels_softseg/sub-nwu05/anat/sub-nwu05_space-other_T2w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-nwu05/anat/sub-nwu05_space-other_T2w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:35" + "Date": "2022-10-22 14:36:35", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-nwu06/anat/sub-nwu06_flip-1_mt-on_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-nwu06/anat/sub-nwu06_flip-1_mt-on_space-other_MTS_label-SC_softseg.json index 53cac6b3e5..f2f12e1281 100644 --- a/derivatives/labels_softseg/sub-nwu06/anat/sub-nwu06_flip-1_mt-on_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-nwu06/anat/sub-nwu06_flip-1_mt-on_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:35" + "Date": "2022-10-22 14:36:35", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-nwu06/anat/sub-nwu06_flip-2_mt-off_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-nwu06/anat/sub-nwu06_flip-2_mt-off_space-other_MTS_label-SC_softseg.json index 53cac6b3e5..f2f12e1281 100644 --- a/derivatives/labels_softseg/sub-nwu06/anat/sub-nwu06_flip-2_mt-off_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-nwu06/anat/sub-nwu06_flip-2_mt-off_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:35" + "Date": "2022-10-22 14:36:35", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-nwu06/anat/sub-nwu06_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-nwu06/anat/sub-nwu06_space-other_T1w_label-SC_softseg.json index 53cac6b3e5..e42be99ed3 100644 --- a/derivatives/labels_softseg/sub-nwu06/anat/sub-nwu06_space-other_T1w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-nwu06/anat/sub-nwu06_space-other_T1w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:35" + "Date": "2022-10-22 14:36:35", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-nwu06/anat/sub-nwu06_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-nwu06/anat/sub-nwu06_space-other_T2star_label-SC_softseg.json index 53cac6b3e5..2cf6386eab 100644 --- a/derivatives/labels_softseg/sub-nwu06/anat/sub-nwu06_space-other_T2star_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-nwu06/anat/sub-nwu06_space-other_T2star_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:35" + "Date": "2022-10-22 14:36:35", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-nwu06/anat/sub-nwu06_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-nwu06/anat/sub-nwu06_space-other_T2w_label-SC_softseg.json index 53cac6b3e5..310aebbd90 100644 --- a/derivatives/labels_softseg/sub-nwu06/anat/sub-nwu06_space-other_T2w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-nwu06/anat/sub-nwu06_space-other_T2w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:35" + "Date": "2022-10-22 14:36:35", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-oxfordFmrib02/anat/sub-oxfordFmrib02_flip-1_mt-on_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-oxfordFmrib02/anat/sub-oxfordFmrib02_flip-1_mt-on_space-other_MTS_label-SC_softseg.json index 53cac6b3e5..f2f12e1281 100644 --- a/derivatives/labels_softseg/sub-oxfordFmrib02/anat/sub-oxfordFmrib02_flip-1_mt-on_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-oxfordFmrib02/anat/sub-oxfordFmrib02_flip-1_mt-on_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:35" + "Date": "2022-10-22 14:36:35", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-oxfordFmrib02/anat/sub-oxfordFmrib02_flip-2_mt-off_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-oxfordFmrib02/anat/sub-oxfordFmrib02_flip-2_mt-off_space-other_MTS_label-SC_softseg.json index 53cac6b3e5..f2f12e1281 100644 --- a/derivatives/labels_softseg/sub-oxfordFmrib02/anat/sub-oxfordFmrib02_flip-2_mt-off_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-oxfordFmrib02/anat/sub-oxfordFmrib02_flip-2_mt-off_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:35" + "Date": "2022-10-22 14:36:35", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-oxfordFmrib02/anat/sub-oxfordFmrib02_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-oxfordFmrib02/anat/sub-oxfordFmrib02_space-other_T1w_label-SC_softseg.json index 53cac6b3e5..e42be99ed3 100644 --- a/derivatives/labels_softseg/sub-oxfordFmrib02/anat/sub-oxfordFmrib02_space-other_T1w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-oxfordFmrib02/anat/sub-oxfordFmrib02_space-other_T1w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:35" + "Date": "2022-10-22 14:36:35", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-oxfordFmrib02/anat/sub-oxfordFmrib02_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-oxfordFmrib02/anat/sub-oxfordFmrib02_space-other_T2star_label-SC_softseg.json index 53cac6b3e5..2cf6386eab 100644 --- a/derivatives/labels_softseg/sub-oxfordFmrib02/anat/sub-oxfordFmrib02_space-other_T2star_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-oxfordFmrib02/anat/sub-oxfordFmrib02_space-other_T2star_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:35" + "Date": "2022-10-22 14:36:35", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-oxfordFmrib02/anat/sub-oxfordFmrib02_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-oxfordFmrib02/anat/sub-oxfordFmrib02_space-other_T2w_label-SC_softseg.json index 53cac6b3e5..310aebbd90 100644 --- a/derivatives/labels_softseg/sub-oxfordFmrib02/anat/sub-oxfordFmrib02_space-other_T2w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-oxfordFmrib02/anat/sub-oxfordFmrib02_space-other_T2w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:35" + "Date": "2022-10-22 14:36:35", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-oxfordFmrib03/anat/sub-oxfordFmrib03_flip-1_mt-on_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-oxfordFmrib03/anat/sub-oxfordFmrib03_flip-1_mt-on_space-other_MTS_label-SC_softseg.json index 53cac6b3e5..f2f12e1281 100644 --- a/derivatives/labels_softseg/sub-oxfordFmrib03/anat/sub-oxfordFmrib03_flip-1_mt-on_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-oxfordFmrib03/anat/sub-oxfordFmrib03_flip-1_mt-on_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:35" + "Date": "2022-10-22 14:36:35", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-oxfordFmrib03/anat/sub-oxfordFmrib03_flip-2_mt-off_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-oxfordFmrib03/anat/sub-oxfordFmrib03_flip-2_mt-off_space-other_MTS_label-SC_softseg.json index 53cac6b3e5..f2f12e1281 100644 --- a/derivatives/labels_softseg/sub-oxfordFmrib03/anat/sub-oxfordFmrib03_flip-2_mt-off_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-oxfordFmrib03/anat/sub-oxfordFmrib03_flip-2_mt-off_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:35" + "Date": "2022-10-22 14:36:35", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-oxfordFmrib03/anat/sub-oxfordFmrib03_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-oxfordFmrib03/anat/sub-oxfordFmrib03_space-other_T1w_label-SC_softseg.json index e36db71caa..d3f4731946 100644 --- a/derivatives/labels_softseg/sub-oxfordFmrib03/anat/sub-oxfordFmrib03_space-other_T1w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-oxfordFmrib03/anat/sub-oxfordFmrib03_space-other_T1w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:36" + "Date": "2022-10-22 14:36:36", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-oxfordFmrib03/anat/sub-oxfordFmrib03_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-oxfordFmrib03/anat/sub-oxfordFmrib03_space-other_T2star_label-SC_softseg.json index e36db71caa..3f3a75aff2 100644 --- a/derivatives/labels_softseg/sub-oxfordFmrib03/anat/sub-oxfordFmrib03_space-other_T2star_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-oxfordFmrib03/anat/sub-oxfordFmrib03_space-other_T2star_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:36" + "Date": "2022-10-22 14:36:36", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-oxfordFmrib03/anat/sub-oxfordFmrib03_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-oxfordFmrib03/anat/sub-oxfordFmrib03_space-other_T2w_label-SC_softseg.json index e36db71caa..fd62b29b63 100644 --- a/derivatives/labels_softseg/sub-oxfordFmrib03/anat/sub-oxfordFmrib03_space-other_T2w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-oxfordFmrib03/anat/sub-oxfordFmrib03_space-other_T2w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:36" + "Date": "2022-10-22 14:36:36", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-oxfordFmrib04/anat/sub-oxfordFmrib04_flip-1_mt-on_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-oxfordFmrib04/anat/sub-oxfordFmrib04_flip-1_mt-on_space-other_MTS_label-SC_softseg.json index e36db71caa..c868dbaa95 100644 --- a/derivatives/labels_softseg/sub-oxfordFmrib04/anat/sub-oxfordFmrib04_flip-1_mt-on_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-oxfordFmrib04/anat/sub-oxfordFmrib04_flip-1_mt-on_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:36" + "Date": "2022-10-22 14:36:36", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-oxfordFmrib04/anat/sub-oxfordFmrib04_flip-2_mt-off_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-oxfordFmrib04/anat/sub-oxfordFmrib04_flip-2_mt-off_space-other_MTS_label-SC_softseg.json index e36db71caa..c868dbaa95 100644 --- a/derivatives/labels_softseg/sub-oxfordFmrib04/anat/sub-oxfordFmrib04_flip-2_mt-off_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-oxfordFmrib04/anat/sub-oxfordFmrib04_flip-2_mt-off_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:36" + "Date": "2022-10-22 14:36:36", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-oxfordFmrib04/anat/sub-oxfordFmrib04_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-oxfordFmrib04/anat/sub-oxfordFmrib04_space-other_T1w_label-SC_softseg.json index e36db71caa..d3f4731946 100644 --- a/derivatives/labels_softseg/sub-oxfordFmrib04/anat/sub-oxfordFmrib04_space-other_T1w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-oxfordFmrib04/anat/sub-oxfordFmrib04_space-other_T1w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:36" + "Date": "2022-10-22 14:36:36", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-oxfordFmrib04/anat/sub-oxfordFmrib04_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-oxfordFmrib04/anat/sub-oxfordFmrib04_space-other_T2star_label-SC_softseg.json index e36db71caa..3f3a75aff2 100644 --- a/derivatives/labels_softseg/sub-oxfordFmrib04/anat/sub-oxfordFmrib04_space-other_T2star_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-oxfordFmrib04/anat/sub-oxfordFmrib04_space-other_T2star_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:36" + "Date": "2022-10-22 14:36:36", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-oxfordFmrib04/anat/sub-oxfordFmrib04_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-oxfordFmrib04/anat/sub-oxfordFmrib04_space-other_T2w_label-SC_softseg.json index e36db71caa..fd62b29b63 100644 --- a/derivatives/labels_softseg/sub-oxfordFmrib04/anat/sub-oxfordFmrib04_space-other_T2w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-oxfordFmrib04/anat/sub-oxfordFmrib04_space-other_T2w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:36" + "Date": "2022-10-22 14:36:36", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-oxfordFmrib05/anat/sub-oxfordFmrib05_flip-1_mt-on_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-oxfordFmrib05/anat/sub-oxfordFmrib05_flip-1_mt-on_space-other_MTS_label-SC_softseg.json index e36db71caa..c868dbaa95 100644 --- a/derivatives/labels_softseg/sub-oxfordFmrib05/anat/sub-oxfordFmrib05_flip-1_mt-on_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-oxfordFmrib05/anat/sub-oxfordFmrib05_flip-1_mt-on_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:36" + "Date": "2022-10-22 14:36:36", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-oxfordFmrib05/anat/sub-oxfordFmrib05_flip-2_mt-off_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-oxfordFmrib05/anat/sub-oxfordFmrib05_flip-2_mt-off_space-other_MTS_label-SC_softseg.json index e36db71caa..c868dbaa95 100644 --- a/derivatives/labels_softseg/sub-oxfordFmrib05/anat/sub-oxfordFmrib05_flip-2_mt-off_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-oxfordFmrib05/anat/sub-oxfordFmrib05_flip-2_mt-off_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:36" + "Date": "2022-10-22 14:36:36", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-oxfordFmrib05/anat/sub-oxfordFmrib05_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-oxfordFmrib05/anat/sub-oxfordFmrib05_space-other_T1w_label-SC_softseg.json index e36db71caa..d3f4731946 100644 --- a/derivatives/labels_softseg/sub-oxfordFmrib05/anat/sub-oxfordFmrib05_space-other_T1w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-oxfordFmrib05/anat/sub-oxfordFmrib05_space-other_T1w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:36" + "Date": "2022-10-22 14:36:36", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-oxfordFmrib05/anat/sub-oxfordFmrib05_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-oxfordFmrib05/anat/sub-oxfordFmrib05_space-other_T2star_label-SC_softseg.json index e36db71caa..3f3a75aff2 100644 --- a/derivatives/labels_softseg/sub-oxfordFmrib05/anat/sub-oxfordFmrib05_space-other_T2star_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-oxfordFmrib05/anat/sub-oxfordFmrib05_space-other_T2star_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:36" + "Date": "2022-10-22 14:36:36", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-oxfordFmrib05/anat/sub-oxfordFmrib05_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-oxfordFmrib05/anat/sub-oxfordFmrib05_space-other_T2w_label-SC_softseg.json index e36db71caa..fd62b29b63 100644 --- a/derivatives/labels_softseg/sub-oxfordFmrib05/anat/sub-oxfordFmrib05_space-other_T2w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-oxfordFmrib05/anat/sub-oxfordFmrib05_space-other_T2w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:36" + "Date": "2022-10-22 14:36:36", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-oxfordFmrib06/anat/sub-oxfordFmrib06_flip-1_mt-on_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-oxfordFmrib06/anat/sub-oxfordFmrib06_flip-1_mt-on_space-other_MTS_label-SC_softseg.json index e36db71caa..c868dbaa95 100644 --- a/derivatives/labels_softseg/sub-oxfordFmrib06/anat/sub-oxfordFmrib06_flip-1_mt-on_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-oxfordFmrib06/anat/sub-oxfordFmrib06_flip-1_mt-on_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:36" + "Date": "2022-10-22 14:36:36", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-oxfordFmrib06/anat/sub-oxfordFmrib06_flip-2_mt-off_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-oxfordFmrib06/anat/sub-oxfordFmrib06_flip-2_mt-off_space-other_MTS_label-SC_softseg.json index e36db71caa..c868dbaa95 100644 --- a/derivatives/labels_softseg/sub-oxfordFmrib06/anat/sub-oxfordFmrib06_flip-2_mt-off_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-oxfordFmrib06/anat/sub-oxfordFmrib06_flip-2_mt-off_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:36" + "Date": "2022-10-22 14:36:36", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-oxfordFmrib06/anat/sub-oxfordFmrib06_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-oxfordFmrib06/anat/sub-oxfordFmrib06_space-other_T1w_label-SC_softseg.json index e36db71caa..d3f4731946 100644 --- a/derivatives/labels_softseg/sub-oxfordFmrib06/anat/sub-oxfordFmrib06_space-other_T1w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-oxfordFmrib06/anat/sub-oxfordFmrib06_space-other_T1w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:36" + "Date": "2022-10-22 14:36:36", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-oxfordFmrib06/anat/sub-oxfordFmrib06_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-oxfordFmrib06/anat/sub-oxfordFmrib06_space-other_T2star_label-SC_softseg.json index e36db71caa..3f3a75aff2 100644 --- a/derivatives/labels_softseg/sub-oxfordFmrib06/anat/sub-oxfordFmrib06_space-other_T2star_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-oxfordFmrib06/anat/sub-oxfordFmrib06_space-other_T2star_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:36" + "Date": "2022-10-22 14:36:36", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-oxfordFmrib06/anat/sub-oxfordFmrib06_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-oxfordFmrib06/anat/sub-oxfordFmrib06_space-other_T2w_label-SC_softseg.json index e36db71caa..fd62b29b63 100644 --- a/derivatives/labels_softseg/sub-oxfordFmrib06/anat/sub-oxfordFmrib06_space-other_T2w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-oxfordFmrib06/anat/sub-oxfordFmrib06_space-other_T2w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:36" + "Date": "2022-10-22 14:36:36", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-oxfordFmrib07/anat/sub-oxfordFmrib07_flip-1_mt-on_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-oxfordFmrib07/anat/sub-oxfordFmrib07_flip-1_mt-on_space-other_MTS_label-SC_softseg.json index e36db71caa..c868dbaa95 100644 --- a/derivatives/labels_softseg/sub-oxfordFmrib07/anat/sub-oxfordFmrib07_flip-1_mt-on_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-oxfordFmrib07/anat/sub-oxfordFmrib07_flip-1_mt-on_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:36" + "Date": "2022-10-22 14:36:36", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-oxfordFmrib07/anat/sub-oxfordFmrib07_flip-2_mt-off_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-oxfordFmrib07/anat/sub-oxfordFmrib07_flip-2_mt-off_space-other_MTS_label-SC_softseg.json index e36db71caa..c868dbaa95 100644 --- a/derivatives/labels_softseg/sub-oxfordFmrib07/anat/sub-oxfordFmrib07_flip-2_mt-off_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-oxfordFmrib07/anat/sub-oxfordFmrib07_flip-2_mt-off_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:36" + "Date": "2022-10-22 14:36:36", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-oxfordFmrib07/anat/sub-oxfordFmrib07_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-oxfordFmrib07/anat/sub-oxfordFmrib07_space-other_T1w_label-SC_softseg.json index e36db71caa..d3f4731946 100644 --- a/derivatives/labels_softseg/sub-oxfordFmrib07/anat/sub-oxfordFmrib07_space-other_T1w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-oxfordFmrib07/anat/sub-oxfordFmrib07_space-other_T1w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:36" + "Date": "2022-10-22 14:36:36", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-oxfordFmrib07/anat/sub-oxfordFmrib07_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-oxfordFmrib07/anat/sub-oxfordFmrib07_space-other_T2star_label-SC_softseg.json index e36db71caa..3f3a75aff2 100644 --- a/derivatives/labels_softseg/sub-oxfordFmrib07/anat/sub-oxfordFmrib07_space-other_T2star_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-oxfordFmrib07/anat/sub-oxfordFmrib07_space-other_T2star_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:36" + "Date": "2022-10-22 14:36:36", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-oxfordFmrib07/anat/sub-oxfordFmrib07_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-oxfordFmrib07/anat/sub-oxfordFmrib07_space-other_T2w_label-SC_softseg.json index e36db71caa..fd62b29b63 100644 --- a/derivatives/labels_softseg/sub-oxfordFmrib07/anat/sub-oxfordFmrib07_space-other_T2w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-oxfordFmrib07/anat/sub-oxfordFmrib07_space-other_T2w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:36" + "Date": "2022-10-22 14:36:36", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-oxfordFmrib08/anat/sub-oxfordFmrib08_flip-1_mt-on_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-oxfordFmrib08/anat/sub-oxfordFmrib08_flip-1_mt-on_space-other_MTS_label-SC_softseg.json index e36db71caa..c868dbaa95 100644 --- a/derivatives/labels_softseg/sub-oxfordFmrib08/anat/sub-oxfordFmrib08_flip-1_mt-on_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-oxfordFmrib08/anat/sub-oxfordFmrib08_flip-1_mt-on_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:36" + "Date": "2022-10-22 14:36:36", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-oxfordFmrib08/anat/sub-oxfordFmrib08_flip-2_mt-off_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-oxfordFmrib08/anat/sub-oxfordFmrib08_flip-2_mt-off_space-other_MTS_label-SC_softseg.json index a3e17bade0..6e4beb3946 100644 --- a/derivatives/labels_softseg/sub-oxfordFmrib08/anat/sub-oxfordFmrib08_flip-2_mt-off_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-oxfordFmrib08/anat/sub-oxfordFmrib08_flip-2_mt-off_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:37" + "Date": "2022-10-22 14:36:37", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-oxfordFmrib08/anat/sub-oxfordFmrib08_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-oxfordFmrib08/anat/sub-oxfordFmrib08_space-other_T1w_label-SC_softseg.json index a3e17bade0..64410d5987 100644 --- a/derivatives/labels_softseg/sub-oxfordFmrib08/anat/sub-oxfordFmrib08_space-other_T1w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-oxfordFmrib08/anat/sub-oxfordFmrib08_space-other_T1w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:37" + "Date": "2022-10-22 14:36:37", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-oxfordFmrib08/anat/sub-oxfordFmrib08_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-oxfordFmrib08/anat/sub-oxfordFmrib08_space-other_T2star_label-SC_softseg.json index a3e17bade0..0dd7217acd 100644 --- a/derivatives/labels_softseg/sub-oxfordFmrib08/anat/sub-oxfordFmrib08_space-other_T2star_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-oxfordFmrib08/anat/sub-oxfordFmrib08_space-other_T2star_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:37" + "Date": "2022-10-22 14:36:37", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-oxfordFmrib08/anat/sub-oxfordFmrib08_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-oxfordFmrib08/anat/sub-oxfordFmrib08_space-other_T2w_label-SC_softseg.json index a3e17bade0..1bd35c6265 100644 --- a/derivatives/labels_softseg/sub-oxfordFmrib08/anat/sub-oxfordFmrib08_space-other_T2w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-oxfordFmrib08/anat/sub-oxfordFmrib08_space-other_T2w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:37" + "Date": "2022-10-22 14:36:37", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-oxfordFmrib09/anat/sub-oxfordFmrib09_flip-1_mt-on_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-oxfordFmrib09/anat/sub-oxfordFmrib09_flip-1_mt-on_space-other_MTS_label-SC_softseg.json index a3e17bade0..6e4beb3946 100644 --- a/derivatives/labels_softseg/sub-oxfordFmrib09/anat/sub-oxfordFmrib09_flip-1_mt-on_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-oxfordFmrib09/anat/sub-oxfordFmrib09_flip-1_mt-on_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:37" + "Date": "2022-10-22 14:36:37", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-oxfordFmrib09/anat/sub-oxfordFmrib09_flip-2_mt-off_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-oxfordFmrib09/anat/sub-oxfordFmrib09_flip-2_mt-off_space-other_MTS_label-SC_softseg.json index a3e17bade0..6e4beb3946 100644 --- a/derivatives/labels_softseg/sub-oxfordFmrib09/anat/sub-oxfordFmrib09_flip-2_mt-off_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-oxfordFmrib09/anat/sub-oxfordFmrib09_flip-2_mt-off_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:37" + "Date": "2022-10-22 14:36:37", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-oxfordFmrib09/anat/sub-oxfordFmrib09_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-oxfordFmrib09/anat/sub-oxfordFmrib09_space-other_T1w_label-SC_softseg.json index a3e17bade0..64410d5987 100644 --- a/derivatives/labels_softseg/sub-oxfordFmrib09/anat/sub-oxfordFmrib09_space-other_T1w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-oxfordFmrib09/anat/sub-oxfordFmrib09_space-other_T1w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:37" + "Date": "2022-10-22 14:36:37", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-oxfordFmrib09/anat/sub-oxfordFmrib09_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-oxfordFmrib09/anat/sub-oxfordFmrib09_space-other_T2star_label-SC_softseg.json index a3e17bade0..0dd7217acd 100644 --- a/derivatives/labels_softseg/sub-oxfordFmrib09/anat/sub-oxfordFmrib09_space-other_T2star_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-oxfordFmrib09/anat/sub-oxfordFmrib09_space-other_T2star_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:37" + "Date": "2022-10-22 14:36:37", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-oxfordFmrib09/anat/sub-oxfordFmrib09_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-oxfordFmrib09/anat/sub-oxfordFmrib09_space-other_T2w_label-SC_softseg.json index a3e17bade0..1bd35c6265 100644 --- a/derivatives/labels_softseg/sub-oxfordFmrib09/anat/sub-oxfordFmrib09_space-other_T2w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-oxfordFmrib09/anat/sub-oxfordFmrib09_space-other_T2w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:37" + "Date": "2022-10-22 14:36:37", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-oxfordFmrib10/anat/sub-oxfordFmrib10_flip-1_mt-on_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-oxfordFmrib10/anat/sub-oxfordFmrib10_flip-1_mt-on_space-other_MTS_label-SC_softseg.json index a3e17bade0..6e4beb3946 100644 --- a/derivatives/labels_softseg/sub-oxfordFmrib10/anat/sub-oxfordFmrib10_flip-1_mt-on_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-oxfordFmrib10/anat/sub-oxfordFmrib10_flip-1_mt-on_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:37" + "Date": "2022-10-22 14:36:37", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-oxfordFmrib10/anat/sub-oxfordFmrib10_flip-2_mt-off_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-oxfordFmrib10/anat/sub-oxfordFmrib10_flip-2_mt-off_space-other_MTS_label-SC_softseg.json index a3e17bade0..6e4beb3946 100644 --- a/derivatives/labels_softseg/sub-oxfordFmrib10/anat/sub-oxfordFmrib10_flip-2_mt-off_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-oxfordFmrib10/anat/sub-oxfordFmrib10_flip-2_mt-off_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:37" + "Date": "2022-10-22 14:36:37", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-oxfordFmrib10/anat/sub-oxfordFmrib10_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-oxfordFmrib10/anat/sub-oxfordFmrib10_space-other_T1w_label-SC_softseg.json index a3e17bade0..64410d5987 100644 --- a/derivatives/labels_softseg/sub-oxfordFmrib10/anat/sub-oxfordFmrib10_space-other_T1w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-oxfordFmrib10/anat/sub-oxfordFmrib10_space-other_T1w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:37" + "Date": "2022-10-22 14:36:37", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-oxfordFmrib10/anat/sub-oxfordFmrib10_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-oxfordFmrib10/anat/sub-oxfordFmrib10_space-other_T2star_label-SC_softseg.json index a3e17bade0..0dd7217acd 100644 --- a/derivatives/labels_softseg/sub-oxfordFmrib10/anat/sub-oxfordFmrib10_space-other_T2star_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-oxfordFmrib10/anat/sub-oxfordFmrib10_space-other_T2star_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:37" + "Date": "2022-10-22 14:36:37", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-oxfordFmrib10/anat/sub-oxfordFmrib10_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-oxfordFmrib10/anat/sub-oxfordFmrib10_space-other_T2w_label-SC_softseg.json index a3e17bade0..1bd35c6265 100644 --- a/derivatives/labels_softseg/sub-oxfordFmrib10/anat/sub-oxfordFmrib10_space-other_T2w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-oxfordFmrib10/anat/sub-oxfordFmrib10_space-other_T2w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:37" + "Date": "2022-10-22 14:36:37", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-oxfordFmrib11/anat/sub-oxfordFmrib11_flip-1_mt-on_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-oxfordFmrib11/anat/sub-oxfordFmrib11_flip-1_mt-on_space-other_MTS_label-SC_softseg.json index a3e17bade0..6e4beb3946 100644 --- a/derivatives/labels_softseg/sub-oxfordFmrib11/anat/sub-oxfordFmrib11_flip-1_mt-on_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-oxfordFmrib11/anat/sub-oxfordFmrib11_flip-1_mt-on_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:37" + "Date": "2022-10-22 14:36:37", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-oxfordFmrib11/anat/sub-oxfordFmrib11_flip-2_mt-off_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-oxfordFmrib11/anat/sub-oxfordFmrib11_flip-2_mt-off_space-other_MTS_label-SC_softseg.json index a3e17bade0..6e4beb3946 100644 --- a/derivatives/labels_softseg/sub-oxfordFmrib11/anat/sub-oxfordFmrib11_flip-2_mt-off_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-oxfordFmrib11/anat/sub-oxfordFmrib11_flip-2_mt-off_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:37" + "Date": "2022-10-22 14:36:37", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-oxfordFmrib11/anat/sub-oxfordFmrib11_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-oxfordFmrib11/anat/sub-oxfordFmrib11_space-other_T1w_label-SC_softseg.json index a3e17bade0..64410d5987 100644 --- a/derivatives/labels_softseg/sub-oxfordFmrib11/anat/sub-oxfordFmrib11_space-other_T1w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-oxfordFmrib11/anat/sub-oxfordFmrib11_space-other_T1w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:37" + "Date": "2022-10-22 14:36:37", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-oxfordFmrib11/anat/sub-oxfordFmrib11_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-oxfordFmrib11/anat/sub-oxfordFmrib11_space-other_T2star_label-SC_softseg.json index a3e17bade0..0dd7217acd 100644 --- a/derivatives/labels_softseg/sub-oxfordFmrib11/anat/sub-oxfordFmrib11_space-other_T2star_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-oxfordFmrib11/anat/sub-oxfordFmrib11_space-other_T2star_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:37" + "Date": "2022-10-22 14:36:37", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-oxfordFmrib11/anat/sub-oxfordFmrib11_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-oxfordFmrib11/anat/sub-oxfordFmrib11_space-other_T2w_label-SC_softseg.json index a3e17bade0..1bd35c6265 100644 --- a/derivatives/labels_softseg/sub-oxfordFmrib11/anat/sub-oxfordFmrib11_space-other_T2w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-oxfordFmrib11/anat/sub-oxfordFmrib11_space-other_T2w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:37" + "Date": "2022-10-22 14:36:37", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-oxfordOhba01/anat/sub-oxfordOhba01_flip-1_mt-on_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-oxfordOhba01/anat/sub-oxfordOhba01_flip-1_mt-on_space-other_MTS_label-SC_softseg.json index a3e17bade0..6e4beb3946 100644 --- a/derivatives/labels_softseg/sub-oxfordOhba01/anat/sub-oxfordOhba01_flip-1_mt-on_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-oxfordOhba01/anat/sub-oxfordOhba01_flip-1_mt-on_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:37" + "Date": "2022-10-22 14:36:37", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-oxfordOhba01/anat/sub-oxfordOhba01_flip-2_mt-off_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-oxfordOhba01/anat/sub-oxfordOhba01_flip-2_mt-off_space-other_MTS_label-SC_softseg.json index a3e17bade0..6e4beb3946 100644 --- a/derivatives/labels_softseg/sub-oxfordOhba01/anat/sub-oxfordOhba01_flip-2_mt-off_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-oxfordOhba01/anat/sub-oxfordOhba01_flip-2_mt-off_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:37" + "Date": "2022-10-22 14:36:37", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-oxfordOhba01/anat/sub-oxfordOhba01_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-oxfordOhba01/anat/sub-oxfordOhba01_space-other_T1w_label-SC_softseg.json index 90c2d5f493..056e138a22 100644 --- a/derivatives/labels_softseg/sub-oxfordOhba01/anat/sub-oxfordOhba01_space-other_T1w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-oxfordOhba01/anat/sub-oxfordOhba01_space-other_T1w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:38" + "Date": "2022-10-22 14:36:38", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-oxfordOhba01/anat/sub-oxfordOhba01_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-oxfordOhba01/anat/sub-oxfordOhba01_space-other_T2star_label-SC_softseg.json index 90c2d5f493..0d8e85563d 100644 --- a/derivatives/labels_softseg/sub-oxfordOhba01/anat/sub-oxfordOhba01_space-other_T2star_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-oxfordOhba01/anat/sub-oxfordOhba01_space-other_T2star_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:38" + "Date": "2022-10-22 14:36:38", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-oxfordOhba01/anat/sub-oxfordOhba01_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-oxfordOhba01/anat/sub-oxfordOhba01_space-other_T2w_label-SC_softseg.json index 90c2d5f493..41fd6be189 100644 --- a/derivatives/labels_softseg/sub-oxfordOhba01/anat/sub-oxfordOhba01_space-other_T2w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-oxfordOhba01/anat/sub-oxfordOhba01_space-other_T2w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:38" + "Date": "2022-10-22 14:36:38", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-oxfordOhba02/anat/sub-oxfordOhba02_flip-1_mt-on_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-oxfordOhba02/anat/sub-oxfordOhba02_flip-1_mt-on_space-other_MTS_label-SC_softseg.json index 90c2d5f493..71f631e875 100644 --- a/derivatives/labels_softseg/sub-oxfordOhba02/anat/sub-oxfordOhba02_flip-1_mt-on_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-oxfordOhba02/anat/sub-oxfordOhba02_flip-1_mt-on_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:38" + "Date": "2022-10-22 14:36:38", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-oxfordOhba02/anat/sub-oxfordOhba02_flip-2_mt-off_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-oxfordOhba02/anat/sub-oxfordOhba02_flip-2_mt-off_space-other_MTS_label-SC_softseg.json index 90c2d5f493..71f631e875 100644 --- a/derivatives/labels_softseg/sub-oxfordOhba02/anat/sub-oxfordOhba02_flip-2_mt-off_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-oxfordOhba02/anat/sub-oxfordOhba02_flip-2_mt-off_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:38" + "Date": "2022-10-22 14:36:38", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-oxfordOhba02/anat/sub-oxfordOhba02_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-oxfordOhba02/anat/sub-oxfordOhba02_space-other_T1w_label-SC_softseg.json index 90c2d5f493..056e138a22 100644 --- a/derivatives/labels_softseg/sub-oxfordOhba02/anat/sub-oxfordOhba02_space-other_T1w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-oxfordOhba02/anat/sub-oxfordOhba02_space-other_T1w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:38" + "Date": "2022-10-22 14:36:38", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-oxfordOhba02/anat/sub-oxfordOhba02_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-oxfordOhba02/anat/sub-oxfordOhba02_space-other_T2star_label-SC_softseg.json index 90c2d5f493..0d8e85563d 100644 --- a/derivatives/labels_softseg/sub-oxfordOhba02/anat/sub-oxfordOhba02_space-other_T2star_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-oxfordOhba02/anat/sub-oxfordOhba02_space-other_T2star_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:38" + "Date": "2022-10-22 14:36:38", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-oxfordOhba02/anat/sub-oxfordOhba02_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-oxfordOhba02/anat/sub-oxfordOhba02_space-other_T2w_label-SC_softseg.json index 90c2d5f493..41fd6be189 100644 --- a/derivatives/labels_softseg/sub-oxfordOhba02/anat/sub-oxfordOhba02_space-other_T2w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-oxfordOhba02/anat/sub-oxfordOhba02_space-other_T2w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:38" + "Date": "2022-10-22 14:36:38", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-oxfordOhba03/anat/sub-oxfordOhba03_flip-1_mt-on_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-oxfordOhba03/anat/sub-oxfordOhba03_flip-1_mt-on_space-other_MTS_label-SC_softseg.json index 90c2d5f493..71f631e875 100644 --- a/derivatives/labels_softseg/sub-oxfordOhba03/anat/sub-oxfordOhba03_flip-1_mt-on_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-oxfordOhba03/anat/sub-oxfordOhba03_flip-1_mt-on_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:38" + "Date": "2022-10-22 14:36:38", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-oxfordOhba03/anat/sub-oxfordOhba03_flip-2_mt-off_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-oxfordOhba03/anat/sub-oxfordOhba03_flip-2_mt-off_space-other_MTS_label-SC_softseg.json index 90c2d5f493..71f631e875 100644 --- a/derivatives/labels_softseg/sub-oxfordOhba03/anat/sub-oxfordOhba03_flip-2_mt-off_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-oxfordOhba03/anat/sub-oxfordOhba03_flip-2_mt-off_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:38" + "Date": "2022-10-22 14:36:38", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-oxfordOhba03/anat/sub-oxfordOhba03_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-oxfordOhba03/anat/sub-oxfordOhba03_space-other_T1w_label-SC_softseg.json index 90c2d5f493..056e138a22 100644 --- a/derivatives/labels_softseg/sub-oxfordOhba03/anat/sub-oxfordOhba03_space-other_T1w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-oxfordOhba03/anat/sub-oxfordOhba03_space-other_T1w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:38" + "Date": "2022-10-22 14:36:38", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-oxfordOhba03/anat/sub-oxfordOhba03_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-oxfordOhba03/anat/sub-oxfordOhba03_space-other_T2star_label-SC_softseg.json index 90c2d5f493..0d8e85563d 100644 --- a/derivatives/labels_softseg/sub-oxfordOhba03/anat/sub-oxfordOhba03_space-other_T2star_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-oxfordOhba03/anat/sub-oxfordOhba03_space-other_T2star_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:38" + "Date": "2022-10-22 14:36:38", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-oxfordOhba03/anat/sub-oxfordOhba03_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-oxfordOhba03/anat/sub-oxfordOhba03_space-other_T2w_label-SC_softseg.json index 90c2d5f493..41fd6be189 100644 --- a/derivatives/labels_softseg/sub-oxfordOhba03/anat/sub-oxfordOhba03_space-other_T2w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-oxfordOhba03/anat/sub-oxfordOhba03_space-other_T2w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:38" + "Date": "2022-10-22 14:36:38", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-oxfordOhba04/anat/sub-oxfordOhba04_flip-1_mt-on_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-oxfordOhba04/anat/sub-oxfordOhba04_flip-1_mt-on_space-other_MTS_label-SC_softseg.json index 90c2d5f493..71f631e875 100644 --- a/derivatives/labels_softseg/sub-oxfordOhba04/anat/sub-oxfordOhba04_flip-1_mt-on_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-oxfordOhba04/anat/sub-oxfordOhba04_flip-1_mt-on_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:38" + "Date": "2022-10-22 14:36:38", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-oxfordOhba04/anat/sub-oxfordOhba04_flip-2_mt-off_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-oxfordOhba04/anat/sub-oxfordOhba04_flip-2_mt-off_space-other_MTS_label-SC_softseg.json index 90c2d5f493..71f631e875 100644 --- a/derivatives/labels_softseg/sub-oxfordOhba04/anat/sub-oxfordOhba04_flip-2_mt-off_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-oxfordOhba04/anat/sub-oxfordOhba04_flip-2_mt-off_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:38" + "Date": "2022-10-22 14:36:38", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-oxfordOhba04/anat/sub-oxfordOhba04_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-oxfordOhba04/anat/sub-oxfordOhba04_space-other_T1w_label-SC_softseg.json index 90c2d5f493..056e138a22 100644 --- a/derivatives/labels_softseg/sub-oxfordOhba04/anat/sub-oxfordOhba04_space-other_T1w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-oxfordOhba04/anat/sub-oxfordOhba04_space-other_T1w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:38" + "Date": "2022-10-22 14:36:38", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-oxfordOhba04/anat/sub-oxfordOhba04_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-oxfordOhba04/anat/sub-oxfordOhba04_space-other_T2star_label-SC_softseg.json index 90c2d5f493..0d8e85563d 100644 --- a/derivatives/labels_softseg/sub-oxfordOhba04/anat/sub-oxfordOhba04_space-other_T2star_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-oxfordOhba04/anat/sub-oxfordOhba04_space-other_T2star_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:38" + "Date": "2022-10-22 14:36:38", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-oxfordOhba04/anat/sub-oxfordOhba04_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-oxfordOhba04/anat/sub-oxfordOhba04_space-other_T2w_label-SC_softseg.json index 90c2d5f493..41fd6be189 100644 --- a/derivatives/labels_softseg/sub-oxfordOhba04/anat/sub-oxfordOhba04_space-other_T2w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-oxfordOhba04/anat/sub-oxfordOhba04_space-other_T2w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:38" + "Date": "2022-10-22 14:36:38", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-oxfordOhba05/anat/sub-oxfordOhba05_flip-1_mt-on_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-oxfordOhba05/anat/sub-oxfordOhba05_flip-1_mt-on_space-other_MTS_label-SC_softseg.json index 90c2d5f493..71f631e875 100644 --- a/derivatives/labels_softseg/sub-oxfordOhba05/anat/sub-oxfordOhba05_flip-1_mt-on_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-oxfordOhba05/anat/sub-oxfordOhba05_flip-1_mt-on_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:38" + "Date": "2022-10-22 14:36:38", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-oxfordOhba05/anat/sub-oxfordOhba05_flip-2_mt-off_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-oxfordOhba05/anat/sub-oxfordOhba05_flip-2_mt-off_space-other_MTS_label-SC_softseg.json index 90c2d5f493..71f631e875 100644 --- a/derivatives/labels_softseg/sub-oxfordOhba05/anat/sub-oxfordOhba05_flip-2_mt-off_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-oxfordOhba05/anat/sub-oxfordOhba05_flip-2_mt-off_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:38" + "Date": "2022-10-22 14:36:38", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-oxfordOhba05/anat/sub-oxfordOhba05_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-oxfordOhba05/anat/sub-oxfordOhba05_space-other_T1w_label-SC_softseg.json index 90c2d5f493..056e138a22 100644 --- a/derivatives/labels_softseg/sub-oxfordOhba05/anat/sub-oxfordOhba05_space-other_T1w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-oxfordOhba05/anat/sub-oxfordOhba05_space-other_T1w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:38" + "Date": "2022-10-22 14:36:38", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-oxfordOhba05/anat/sub-oxfordOhba05_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-oxfordOhba05/anat/sub-oxfordOhba05_space-other_T2star_label-SC_softseg.json index 90c2d5f493..0d8e85563d 100644 --- a/derivatives/labels_softseg/sub-oxfordOhba05/anat/sub-oxfordOhba05_space-other_T2star_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-oxfordOhba05/anat/sub-oxfordOhba05_space-other_T2star_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:38" + "Date": "2022-10-22 14:36:38", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-oxfordOhba05/anat/sub-oxfordOhba05_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-oxfordOhba05/anat/sub-oxfordOhba05_space-other_T2w_label-SC_softseg.json index 7b61e22a16..138fddb197 100644 --- a/derivatives/labels_softseg/sub-oxfordOhba05/anat/sub-oxfordOhba05_space-other_T2w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-oxfordOhba05/anat/sub-oxfordOhba05_space-other_T2w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:39" + "Date": "2022-10-22 14:36:39", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-pavia01/anat/sub-pavia01_flip-1_mt-on_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-pavia01/anat/sub-pavia01_flip-1_mt-on_space-other_MTS_label-SC_softseg.json index 7b61e22a16..6a6ceaec99 100644 --- a/derivatives/labels_softseg/sub-pavia01/anat/sub-pavia01_flip-1_mt-on_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-pavia01/anat/sub-pavia01_flip-1_mt-on_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:39" + "Date": "2022-10-22 14:36:39", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-pavia01/anat/sub-pavia01_flip-2_mt-off_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-pavia01/anat/sub-pavia01_flip-2_mt-off_space-other_MTS_label-SC_softseg.json index 7b61e22a16..6a6ceaec99 100644 --- a/derivatives/labels_softseg/sub-pavia01/anat/sub-pavia01_flip-2_mt-off_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-pavia01/anat/sub-pavia01_flip-2_mt-off_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:39" + "Date": "2022-10-22 14:36:39", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-pavia01/anat/sub-pavia01_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-pavia01/anat/sub-pavia01_space-other_T1w_label-SC_softseg.json index 7b61e22a16..c99cf22522 100644 --- a/derivatives/labels_softseg/sub-pavia01/anat/sub-pavia01_space-other_T1w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-pavia01/anat/sub-pavia01_space-other_T1w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:39" + "Date": "2022-10-22 14:36:39", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-pavia01/anat/sub-pavia01_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-pavia01/anat/sub-pavia01_space-other_T2star_label-SC_softseg.json index 7b61e22a16..0f33145de1 100644 --- a/derivatives/labels_softseg/sub-pavia01/anat/sub-pavia01_space-other_T2star_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-pavia01/anat/sub-pavia01_space-other_T2star_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:39" + "Date": "2022-10-22 14:36:39", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-pavia01/anat/sub-pavia01_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-pavia01/anat/sub-pavia01_space-other_T2w_label-SC_softseg.json index 7b61e22a16..138fddb197 100644 --- a/derivatives/labels_softseg/sub-pavia01/anat/sub-pavia01_space-other_T2w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-pavia01/anat/sub-pavia01_space-other_T2w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:39" + "Date": "2022-10-22 14:36:39", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-pavia02/anat/sub-pavia02_flip-1_mt-on_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-pavia02/anat/sub-pavia02_flip-1_mt-on_space-other_MTS_label-SC_softseg.json index 7b61e22a16..6a6ceaec99 100644 --- a/derivatives/labels_softseg/sub-pavia02/anat/sub-pavia02_flip-1_mt-on_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-pavia02/anat/sub-pavia02_flip-1_mt-on_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:39" + "Date": "2022-10-22 14:36:39", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-pavia02/anat/sub-pavia02_flip-2_mt-off_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-pavia02/anat/sub-pavia02_flip-2_mt-off_space-other_MTS_label-SC_softseg.json index 7b61e22a16..6a6ceaec99 100644 --- a/derivatives/labels_softseg/sub-pavia02/anat/sub-pavia02_flip-2_mt-off_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-pavia02/anat/sub-pavia02_flip-2_mt-off_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:39" + "Date": "2022-10-22 14:36:39", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-pavia02/anat/sub-pavia02_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-pavia02/anat/sub-pavia02_space-other_T1w_label-SC_softseg.json index 7b61e22a16..c99cf22522 100644 --- a/derivatives/labels_softseg/sub-pavia02/anat/sub-pavia02_space-other_T1w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-pavia02/anat/sub-pavia02_space-other_T1w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:39" + "Date": "2022-10-22 14:36:39", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-pavia02/anat/sub-pavia02_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-pavia02/anat/sub-pavia02_space-other_T2star_label-SC_softseg.json index 7b61e22a16..0f33145de1 100644 --- a/derivatives/labels_softseg/sub-pavia02/anat/sub-pavia02_space-other_T2star_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-pavia02/anat/sub-pavia02_space-other_T2star_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:39" + "Date": "2022-10-22 14:36:39", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-pavia02/anat/sub-pavia02_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-pavia02/anat/sub-pavia02_space-other_T2w_label-SC_softseg.json index 7b61e22a16..138fddb197 100644 --- a/derivatives/labels_softseg/sub-pavia02/anat/sub-pavia02_space-other_T2w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-pavia02/anat/sub-pavia02_space-other_T2w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:39" + "Date": "2022-10-22 14:36:39", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-pavia03/anat/sub-pavia03_flip-1_mt-on_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-pavia03/anat/sub-pavia03_flip-1_mt-on_space-other_MTS_label-SC_softseg.json index 7b61e22a16..6a6ceaec99 100644 --- a/derivatives/labels_softseg/sub-pavia03/anat/sub-pavia03_flip-1_mt-on_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-pavia03/anat/sub-pavia03_flip-1_mt-on_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:39" + "Date": "2022-10-22 14:36:39", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-pavia03/anat/sub-pavia03_flip-2_mt-off_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-pavia03/anat/sub-pavia03_flip-2_mt-off_space-other_MTS_label-SC_softseg.json index 7b61e22a16..6a6ceaec99 100644 --- a/derivatives/labels_softseg/sub-pavia03/anat/sub-pavia03_flip-2_mt-off_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-pavia03/anat/sub-pavia03_flip-2_mt-off_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:39" + "Date": "2022-10-22 14:36:39", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-pavia03/anat/sub-pavia03_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-pavia03/anat/sub-pavia03_space-other_T1w_label-SC_softseg.json index 7b61e22a16..c99cf22522 100644 --- a/derivatives/labels_softseg/sub-pavia03/anat/sub-pavia03_space-other_T1w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-pavia03/anat/sub-pavia03_space-other_T1w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:39" + "Date": "2022-10-22 14:36:39", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-pavia03/anat/sub-pavia03_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-pavia03/anat/sub-pavia03_space-other_T2star_label-SC_softseg.json index 7b61e22a16..0f33145de1 100644 --- a/derivatives/labels_softseg/sub-pavia03/anat/sub-pavia03_space-other_T2star_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-pavia03/anat/sub-pavia03_space-other_T2star_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:39" + "Date": "2022-10-22 14:36:39", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-pavia03/anat/sub-pavia03_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-pavia03/anat/sub-pavia03_space-other_T2w_label-SC_softseg.json index 7b61e22a16..138fddb197 100644 --- a/derivatives/labels_softseg/sub-pavia03/anat/sub-pavia03_space-other_T2w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-pavia03/anat/sub-pavia03_space-other_T2w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:39" + "Date": "2022-10-22 14:36:39", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-pavia04/anat/sub-pavia04_flip-1_mt-on_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-pavia04/anat/sub-pavia04_flip-1_mt-on_space-other_MTS_label-SC_softseg.json index 7b61e22a16..6a6ceaec99 100644 --- a/derivatives/labels_softseg/sub-pavia04/anat/sub-pavia04_flip-1_mt-on_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-pavia04/anat/sub-pavia04_flip-1_mt-on_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:39" + "Date": "2022-10-22 14:36:39", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-pavia04/anat/sub-pavia04_flip-2_mt-off_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-pavia04/anat/sub-pavia04_flip-2_mt-off_space-other_MTS_label-SC_softseg.json index 7b61e22a16..6a6ceaec99 100644 --- a/derivatives/labels_softseg/sub-pavia04/anat/sub-pavia04_flip-2_mt-off_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-pavia04/anat/sub-pavia04_flip-2_mt-off_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:39" + "Date": "2022-10-22 14:36:39", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-pavia04/anat/sub-pavia04_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-pavia04/anat/sub-pavia04_space-other_T1w_label-SC_softseg.json index 7b61e22a16..c99cf22522 100644 --- a/derivatives/labels_softseg/sub-pavia04/anat/sub-pavia04_space-other_T1w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-pavia04/anat/sub-pavia04_space-other_T1w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:39" + "Date": "2022-10-22 14:36:39", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-pavia04/anat/sub-pavia04_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-pavia04/anat/sub-pavia04_space-other_T2star_label-SC_softseg.json index 7b61e22a16..0f33145de1 100644 --- a/derivatives/labels_softseg/sub-pavia04/anat/sub-pavia04_space-other_T2star_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-pavia04/anat/sub-pavia04_space-other_T2star_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:39" + "Date": "2022-10-22 14:36:39", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-pavia04/anat/sub-pavia04_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-pavia04/anat/sub-pavia04_space-other_T2w_label-SC_softseg.json index 7b61e22a16..138fddb197 100644 --- a/derivatives/labels_softseg/sub-pavia04/anat/sub-pavia04_space-other_T2w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-pavia04/anat/sub-pavia04_space-other_T2w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:39" + "Date": "2022-10-22 14:36:39", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-pavia05/anat/sub-pavia05_flip-1_mt-on_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-pavia05/anat/sub-pavia05_flip-1_mt-on_space-other_MTS_label-SC_softseg.json index 7b61e22a16..6a6ceaec99 100644 --- a/derivatives/labels_softseg/sub-pavia05/anat/sub-pavia05_flip-1_mt-on_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-pavia05/anat/sub-pavia05_flip-1_mt-on_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:39" + "Date": "2022-10-22 14:36:39", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-pavia05/anat/sub-pavia05_flip-2_mt-off_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-pavia05/anat/sub-pavia05_flip-2_mt-off_space-other_MTS_label-SC_softseg.json index 7b61e22a16..6a6ceaec99 100644 --- a/derivatives/labels_softseg/sub-pavia05/anat/sub-pavia05_flip-2_mt-off_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-pavia05/anat/sub-pavia05_flip-2_mt-off_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:39" + "Date": "2022-10-22 14:36:39", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-pavia05/anat/sub-pavia05_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-pavia05/anat/sub-pavia05_space-other_T1w_label-SC_softseg.json index 7b61e22a16..c99cf22522 100644 --- a/derivatives/labels_softseg/sub-pavia05/anat/sub-pavia05_space-other_T1w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-pavia05/anat/sub-pavia05_space-other_T1w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:39" + "Date": "2022-10-22 14:36:39", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-pavia05/anat/sub-pavia05_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-pavia05/anat/sub-pavia05_space-other_T2star_label-SC_softseg.json index 3286ad506a..b0ac9bdb02 100644 --- a/derivatives/labels_softseg/sub-pavia05/anat/sub-pavia05_space-other_T2star_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-pavia05/anat/sub-pavia05_space-other_T2star_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:40" + "Date": "2022-10-22 14:36:40", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-pavia05/anat/sub-pavia05_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-pavia05/anat/sub-pavia05_space-other_T2w_label-SC_softseg.json index 3286ad506a..9d19030d9a 100644 --- a/derivatives/labels_softseg/sub-pavia05/anat/sub-pavia05_space-other_T2w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-pavia05/anat/sub-pavia05_space-other_T2w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:40" + "Date": "2022-10-22 14:36:40", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-pavia06/anat/sub-pavia06_flip-1_mt-on_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-pavia06/anat/sub-pavia06_flip-1_mt-on_space-other_MTS_label-SC_softseg.json index 3286ad506a..040fde22da 100644 --- a/derivatives/labels_softseg/sub-pavia06/anat/sub-pavia06_flip-1_mt-on_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-pavia06/anat/sub-pavia06_flip-1_mt-on_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:40" + "Date": "2022-10-22 14:36:40", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-pavia06/anat/sub-pavia06_flip-2_mt-off_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-pavia06/anat/sub-pavia06_flip-2_mt-off_space-other_MTS_label-SC_softseg.json index 3286ad506a..040fde22da 100644 --- a/derivatives/labels_softseg/sub-pavia06/anat/sub-pavia06_flip-2_mt-off_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-pavia06/anat/sub-pavia06_flip-2_mt-off_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:40" + "Date": "2022-10-22 14:36:40", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-pavia06/anat/sub-pavia06_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-pavia06/anat/sub-pavia06_space-other_T1w_label-SC_softseg.json index 3286ad506a..353b59af03 100644 --- a/derivatives/labels_softseg/sub-pavia06/anat/sub-pavia06_space-other_T1w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-pavia06/anat/sub-pavia06_space-other_T1w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:40" + "Date": "2022-10-22 14:36:40", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-pavia06/anat/sub-pavia06_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-pavia06/anat/sub-pavia06_space-other_T2star_label-SC_softseg.json index 3286ad506a..b0ac9bdb02 100644 --- a/derivatives/labels_softseg/sub-pavia06/anat/sub-pavia06_space-other_T2star_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-pavia06/anat/sub-pavia06_space-other_T2star_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:40" + "Date": "2022-10-22 14:36:40", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-pavia06/anat/sub-pavia06_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-pavia06/anat/sub-pavia06_space-other_T2w_label-SC_softseg.json index 3286ad506a..9d19030d9a 100644 --- a/derivatives/labels_softseg/sub-pavia06/anat/sub-pavia06_space-other_T2w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-pavia06/anat/sub-pavia06_space-other_T2w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:40" + "Date": "2022-10-22 14:36:40", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-perform01/anat/sub-perform01_flip-1_mt-on_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-perform01/anat/sub-perform01_flip-1_mt-on_space-other_MTS_label-SC_softseg.json index 3286ad506a..040fde22da 100644 --- a/derivatives/labels_softseg/sub-perform01/anat/sub-perform01_flip-1_mt-on_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-perform01/anat/sub-perform01_flip-1_mt-on_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:40" + "Date": "2022-10-22 14:36:40", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-perform01/anat/sub-perform01_flip-2_mt-off_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-perform01/anat/sub-perform01_flip-2_mt-off_space-other_MTS_label-SC_softseg.json index 3286ad506a..040fde22da 100644 --- a/derivatives/labels_softseg/sub-perform01/anat/sub-perform01_flip-2_mt-off_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-perform01/anat/sub-perform01_flip-2_mt-off_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:40" + "Date": "2022-10-22 14:36:40", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-perform01/anat/sub-perform01_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-perform01/anat/sub-perform01_space-other_T1w_label-SC_softseg.json index 3286ad506a..353b59af03 100644 --- a/derivatives/labels_softseg/sub-perform01/anat/sub-perform01_space-other_T1w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-perform01/anat/sub-perform01_space-other_T1w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:40" + "Date": "2022-10-22 14:36:40", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-perform01/anat/sub-perform01_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-perform01/anat/sub-perform01_space-other_T2star_label-SC_softseg.json index 3286ad506a..b0ac9bdb02 100644 --- a/derivatives/labels_softseg/sub-perform01/anat/sub-perform01_space-other_T2star_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-perform01/anat/sub-perform01_space-other_T2star_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:40" + "Date": "2022-10-22 14:36:40", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-perform01/anat/sub-perform01_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-perform01/anat/sub-perform01_space-other_T2w_label-SC_softseg.json index 3286ad506a..9d19030d9a 100644 --- a/derivatives/labels_softseg/sub-perform01/anat/sub-perform01_space-other_T2w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-perform01/anat/sub-perform01_space-other_T2w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:40" + "Date": "2022-10-22 14:36:40", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-perform02/anat/sub-perform02_flip-1_mt-on_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-perform02/anat/sub-perform02_flip-1_mt-on_space-other_MTS_label-SC_softseg.json index 3286ad506a..040fde22da 100644 --- a/derivatives/labels_softseg/sub-perform02/anat/sub-perform02_flip-1_mt-on_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-perform02/anat/sub-perform02_flip-1_mt-on_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:40" + "Date": "2022-10-22 14:36:40", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-perform02/anat/sub-perform02_flip-2_mt-off_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-perform02/anat/sub-perform02_flip-2_mt-off_space-other_MTS_label-SC_softseg.json index 3286ad506a..040fde22da 100644 --- a/derivatives/labels_softseg/sub-perform02/anat/sub-perform02_flip-2_mt-off_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-perform02/anat/sub-perform02_flip-2_mt-off_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:40" + "Date": "2022-10-22 14:36:40", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-perform02/anat/sub-perform02_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-perform02/anat/sub-perform02_space-other_T1w_label-SC_softseg.json index 3286ad506a..353b59af03 100644 --- a/derivatives/labels_softseg/sub-perform02/anat/sub-perform02_space-other_T1w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-perform02/anat/sub-perform02_space-other_T1w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:40" + "Date": "2022-10-22 14:36:40", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-perform02/anat/sub-perform02_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-perform02/anat/sub-perform02_space-other_T2star_label-SC_softseg.json index 3286ad506a..b0ac9bdb02 100644 --- a/derivatives/labels_softseg/sub-perform02/anat/sub-perform02_space-other_T2star_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-perform02/anat/sub-perform02_space-other_T2star_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:40" + "Date": "2022-10-22 14:36:40", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-perform02/anat/sub-perform02_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-perform02/anat/sub-perform02_space-other_T2w_label-SC_softseg.json index 3286ad506a..9d19030d9a 100644 --- a/derivatives/labels_softseg/sub-perform02/anat/sub-perform02_space-other_T2w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-perform02/anat/sub-perform02_space-other_T2w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:40" + "Date": "2022-10-22 14:36:40", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-perform03/anat/sub-perform03_flip-1_mt-on_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-perform03/anat/sub-perform03_flip-1_mt-on_space-other_MTS_label-SC_softseg.json index 3286ad506a..040fde22da 100644 --- a/derivatives/labels_softseg/sub-perform03/anat/sub-perform03_flip-1_mt-on_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-perform03/anat/sub-perform03_flip-1_mt-on_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:40" + "Date": "2022-10-22 14:36:40", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-perform03/anat/sub-perform03_flip-2_mt-off_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-perform03/anat/sub-perform03_flip-2_mt-off_space-other_MTS_label-SC_softseg.json index 3286ad506a..040fde22da 100644 --- a/derivatives/labels_softseg/sub-perform03/anat/sub-perform03_flip-2_mt-off_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-perform03/anat/sub-perform03_flip-2_mt-off_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:40" + "Date": "2022-10-22 14:36:40", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-perform03/anat/sub-perform03_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-perform03/anat/sub-perform03_space-other_T1w_label-SC_softseg.json index 8f25190093..2a52540949 100644 --- a/derivatives/labels_softseg/sub-perform03/anat/sub-perform03_space-other_T1w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-perform03/anat/sub-perform03_space-other_T1w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:41" + "Date": "2022-10-22 14:36:41", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-perform03/anat/sub-perform03_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-perform03/anat/sub-perform03_space-other_T2star_label-SC_softseg.json index 8f25190093..4f7b133852 100644 --- a/derivatives/labels_softseg/sub-perform03/anat/sub-perform03_space-other_T2star_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-perform03/anat/sub-perform03_space-other_T2star_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:41" + "Date": "2022-10-22 14:36:41", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-perform03/anat/sub-perform03_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-perform03/anat/sub-perform03_space-other_T2w_label-SC_softseg.json index 8f25190093..c43f9308fa 100644 --- a/derivatives/labels_softseg/sub-perform03/anat/sub-perform03_space-other_T2w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-perform03/anat/sub-perform03_space-other_T2w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:41" + "Date": "2022-10-22 14:36:41", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-perform04/anat/sub-perform04_flip-1_mt-on_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-perform04/anat/sub-perform04_flip-1_mt-on_space-other_MTS_label-SC_softseg.json index 8f25190093..b533e4d3fe 100644 --- a/derivatives/labels_softseg/sub-perform04/anat/sub-perform04_flip-1_mt-on_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-perform04/anat/sub-perform04_flip-1_mt-on_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:41" + "Date": "2022-10-22 14:36:41", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-perform04/anat/sub-perform04_flip-2_mt-off_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-perform04/anat/sub-perform04_flip-2_mt-off_space-other_MTS_label-SC_softseg.json index 8f25190093..b533e4d3fe 100644 --- a/derivatives/labels_softseg/sub-perform04/anat/sub-perform04_flip-2_mt-off_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-perform04/anat/sub-perform04_flip-2_mt-off_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:41" + "Date": "2022-10-22 14:36:41", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-perform04/anat/sub-perform04_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-perform04/anat/sub-perform04_space-other_T1w_label-SC_softseg.json index 8f25190093..2a52540949 100644 --- a/derivatives/labels_softseg/sub-perform04/anat/sub-perform04_space-other_T1w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-perform04/anat/sub-perform04_space-other_T1w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:41" + "Date": "2022-10-22 14:36:41", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-perform04/anat/sub-perform04_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-perform04/anat/sub-perform04_space-other_T2star_label-SC_softseg.json index 8f25190093..4f7b133852 100644 --- a/derivatives/labels_softseg/sub-perform04/anat/sub-perform04_space-other_T2star_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-perform04/anat/sub-perform04_space-other_T2star_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:41" + "Date": "2022-10-22 14:36:41", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-perform04/anat/sub-perform04_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-perform04/anat/sub-perform04_space-other_T2w_label-SC_softseg.json index 8f25190093..c43f9308fa 100644 --- a/derivatives/labels_softseg/sub-perform04/anat/sub-perform04_space-other_T2w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-perform04/anat/sub-perform04_space-other_T2w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:41" + "Date": "2022-10-22 14:36:41", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-perform05/anat/sub-perform05_flip-1_mt-on_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-perform05/anat/sub-perform05_flip-1_mt-on_space-other_MTS_label-SC_softseg.json index 8f25190093..b533e4d3fe 100644 --- a/derivatives/labels_softseg/sub-perform05/anat/sub-perform05_flip-1_mt-on_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-perform05/anat/sub-perform05_flip-1_mt-on_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:41" + "Date": "2022-10-22 14:36:41", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-perform05/anat/sub-perform05_flip-2_mt-off_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-perform05/anat/sub-perform05_flip-2_mt-off_space-other_MTS_label-SC_softseg.json index 8f25190093..b533e4d3fe 100644 --- a/derivatives/labels_softseg/sub-perform05/anat/sub-perform05_flip-2_mt-off_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-perform05/anat/sub-perform05_flip-2_mt-off_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:41" + "Date": "2022-10-22 14:36:41", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-perform05/anat/sub-perform05_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-perform05/anat/sub-perform05_space-other_T1w_label-SC_softseg.json index 8f25190093..2a52540949 100644 --- a/derivatives/labels_softseg/sub-perform05/anat/sub-perform05_space-other_T1w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-perform05/anat/sub-perform05_space-other_T1w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:41" + "Date": "2022-10-22 14:36:41", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-perform05/anat/sub-perform05_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-perform05/anat/sub-perform05_space-other_T2star_label-SC_softseg.json index 8f25190093..4f7b133852 100644 --- a/derivatives/labels_softseg/sub-perform05/anat/sub-perform05_space-other_T2star_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-perform05/anat/sub-perform05_space-other_T2star_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:41" + "Date": "2022-10-22 14:36:41", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-perform05/anat/sub-perform05_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-perform05/anat/sub-perform05_space-other_T2w_label-SC_softseg.json index 8f25190093..c43f9308fa 100644 --- a/derivatives/labels_softseg/sub-perform05/anat/sub-perform05_space-other_T2w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-perform05/anat/sub-perform05_space-other_T2w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:41" + "Date": "2022-10-22 14:36:41", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-perform06/anat/sub-perform06_flip-1_mt-on_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-perform06/anat/sub-perform06_flip-1_mt-on_space-other_MTS_label-SC_softseg.json index 8f25190093..b533e4d3fe 100644 --- a/derivatives/labels_softseg/sub-perform06/anat/sub-perform06_flip-1_mt-on_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-perform06/anat/sub-perform06_flip-1_mt-on_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:41" + "Date": "2022-10-22 14:36:41", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-perform06/anat/sub-perform06_flip-2_mt-off_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-perform06/anat/sub-perform06_flip-2_mt-off_space-other_MTS_label-SC_softseg.json index 8f25190093..b533e4d3fe 100644 --- a/derivatives/labels_softseg/sub-perform06/anat/sub-perform06_flip-2_mt-off_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-perform06/anat/sub-perform06_flip-2_mt-off_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:41" + "Date": "2022-10-22 14:36:41", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-perform06/anat/sub-perform06_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-perform06/anat/sub-perform06_space-other_T1w_label-SC_softseg.json index 8f25190093..2a52540949 100644 --- a/derivatives/labels_softseg/sub-perform06/anat/sub-perform06_space-other_T1w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-perform06/anat/sub-perform06_space-other_T1w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:41" + "Date": "2022-10-22 14:36:41", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-perform06/anat/sub-perform06_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-perform06/anat/sub-perform06_space-other_T2star_label-SC_softseg.json index 8f25190093..4f7b133852 100644 --- a/derivatives/labels_softseg/sub-perform06/anat/sub-perform06_space-other_T2star_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-perform06/anat/sub-perform06_space-other_T2star_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:41" + "Date": "2022-10-22 14:36:41", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-perform06/anat/sub-perform06_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-perform06/anat/sub-perform06_space-other_T2w_label-SC_softseg.json index 8f25190093..c43f9308fa 100644 --- a/derivatives/labels_softseg/sub-perform06/anat/sub-perform06_space-other_T2w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-perform06/anat/sub-perform06_space-other_T2w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:41" + "Date": "2022-10-22 14:36:41", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-queensland01/anat/sub-queensland01_flip-1_mt-on_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-queensland01/anat/sub-queensland01_flip-1_mt-on_space-other_MTS_label-SC_softseg.json index 8f25190093..b533e4d3fe 100644 --- a/derivatives/labels_softseg/sub-queensland01/anat/sub-queensland01_flip-1_mt-on_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-queensland01/anat/sub-queensland01_flip-1_mt-on_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:41" + "Date": "2022-10-22 14:36:41", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-queensland01/anat/sub-queensland01_flip-2_mt-off_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-queensland01/anat/sub-queensland01_flip-2_mt-off_space-other_MTS_label-SC_softseg.json index 8f25190093..b533e4d3fe 100644 --- a/derivatives/labels_softseg/sub-queensland01/anat/sub-queensland01_flip-2_mt-off_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-queensland01/anat/sub-queensland01_flip-2_mt-off_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:41" + "Date": "2022-10-22 14:36:41", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-queensland01/anat/sub-queensland01_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-queensland01/anat/sub-queensland01_space-other_T1w_label-SC_softseg.json index e1b68a2928..19d7af388d 100644 --- a/derivatives/labels_softseg/sub-queensland01/anat/sub-queensland01_space-other_T1w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-queensland01/anat/sub-queensland01_space-other_T1w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:42" + "Date": "2022-10-22 14:36:42", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-queensland01/anat/sub-queensland01_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-queensland01/anat/sub-queensland01_space-other_T2star_label-SC_softseg.json index e1b68a2928..bf50030012 100644 --- a/derivatives/labels_softseg/sub-queensland01/anat/sub-queensland01_space-other_T2star_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-queensland01/anat/sub-queensland01_space-other_T2star_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:42" + "Date": "2022-10-22 14:36:42", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-queensland01/anat/sub-queensland01_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-queensland01/anat/sub-queensland01_space-other_T2w_label-SC_softseg.json index e1b68a2928..4bbb66a72b 100644 --- a/derivatives/labels_softseg/sub-queensland01/anat/sub-queensland01_space-other_T2w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-queensland01/anat/sub-queensland01_space-other_T2w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:42" + "Date": "2022-10-22 14:36:42", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-queensland02/anat/sub-queensland02_flip-1_mt-on_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-queensland02/anat/sub-queensland02_flip-1_mt-on_space-other_MTS_label-SC_softseg.json index e1b68a2928..db93662c6e 100644 --- a/derivatives/labels_softseg/sub-queensland02/anat/sub-queensland02_flip-1_mt-on_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-queensland02/anat/sub-queensland02_flip-1_mt-on_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:42" + "Date": "2022-10-22 14:36:42", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-queensland02/anat/sub-queensland02_flip-2_mt-off_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-queensland02/anat/sub-queensland02_flip-2_mt-off_space-other_MTS_label-SC_softseg.json index e1b68a2928..db93662c6e 100644 --- a/derivatives/labels_softseg/sub-queensland02/anat/sub-queensland02_flip-2_mt-off_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-queensland02/anat/sub-queensland02_flip-2_mt-off_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:42" + "Date": "2022-10-22 14:36:42", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-queensland02/anat/sub-queensland02_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-queensland02/anat/sub-queensland02_space-other_T1w_label-SC_softseg.json index e1b68a2928..19d7af388d 100644 --- a/derivatives/labels_softseg/sub-queensland02/anat/sub-queensland02_space-other_T1w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-queensland02/anat/sub-queensland02_space-other_T1w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:42" + "Date": "2022-10-22 14:36:42", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-queensland02/anat/sub-queensland02_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-queensland02/anat/sub-queensland02_space-other_T2star_label-SC_softseg.json index e1b68a2928..bf50030012 100644 --- a/derivatives/labels_softseg/sub-queensland02/anat/sub-queensland02_space-other_T2star_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-queensland02/anat/sub-queensland02_space-other_T2star_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:42" + "Date": "2022-10-22 14:36:42", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-queensland02/anat/sub-queensland02_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-queensland02/anat/sub-queensland02_space-other_T2w_label-SC_softseg.json index e1b68a2928..4bbb66a72b 100644 --- a/derivatives/labels_softseg/sub-queensland02/anat/sub-queensland02_space-other_T2w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-queensland02/anat/sub-queensland02_space-other_T2w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:42" + "Date": "2022-10-22 14:36:42", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-queensland03/anat/sub-queensland03_flip-1_mt-on_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-queensland03/anat/sub-queensland03_flip-1_mt-on_space-other_MTS_label-SC_softseg.json index e1b68a2928..db93662c6e 100644 --- a/derivatives/labels_softseg/sub-queensland03/anat/sub-queensland03_flip-1_mt-on_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-queensland03/anat/sub-queensland03_flip-1_mt-on_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:42" + "Date": "2022-10-22 14:36:42", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-queensland03/anat/sub-queensland03_flip-2_mt-off_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-queensland03/anat/sub-queensland03_flip-2_mt-off_space-other_MTS_label-SC_softseg.json index e1b68a2928..db93662c6e 100644 --- a/derivatives/labels_softseg/sub-queensland03/anat/sub-queensland03_flip-2_mt-off_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-queensland03/anat/sub-queensland03_flip-2_mt-off_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:42" + "Date": "2022-10-22 14:36:42", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-queensland03/anat/sub-queensland03_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-queensland03/anat/sub-queensland03_space-other_T1w_label-SC_softseg.json index e1b68a2928..19d7af388d 100644 --- a/derivatives/labels_softseg/sub-queensland03/anat/sub-queensland03_space-other_T1w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-queensland03/anat/sub-queensland03_space-other_T1w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:42" + "Date": "2022-10-22 14:36:42", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-queensland03/anat/sub-queensland03_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-queensland03/anat/sub-queensland03_space-other_T2star_label-SC_softseg.json index e1b68a2928..bf50030012 100644 --- a/derivatives/labels_softseg/sub-queensland03/anat/sub-queensland03_space-other_T2star_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-queensland03/anat/sub-queensland03_space-other_T2star_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:42" + "Date": "2022-10-22 14:36:42", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-queensland03/anat/sub-queensland03_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-queensland03/anat/sub-queensland03_space-other_T2w_label-SC_softseg.json index e1b68a2928..4bbb66a72b 100644 --- a/derivatives/labels_softseg/sub-queensland03/anat/sub-queensland03_space-other_T2w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-queensland03/anat/sub-queensland03_space-other_T2w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:42" + "Date": "2022-10-22 14:36:42", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-queensland04/anat/sub-queensland04_flip-1_mt-on_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-queensland04/anat/sub-queensland04_flip-1_mt-on_space-other_MTS_label-SC_softseg.json index e1b68a2928..db93662c6e 100644 --- a/derivatives/labels_softseg/sub-queensland04/anat/sub-queensland04_flip-1_mt-on_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-queensland04/anat/sub-queensland04_flip-1_mt-on_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:42" + "Date": "2022-10-22 14:36:42", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-queensland04/anat/sub-queensland04_flip-2_mt-off_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-queensland04/anat/sub-queensland04_flip-2_mt-off_space-other_MTS_label-SC_softseg.json index e1b68a2928..db93662c6e 100644 --- a/derivatives/labels_softseg/sub-queensland04/anat/sub-queensland04_flip-2_mt-off_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-queensland04/anat/sub-queensland04_flip-2_mt-off_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:42" + "Date": "2022-10-22 14:36:42", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-queensland04/anat/sub-queensland04_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-queensland04/anat/sub-queensland04_space-other_T1w_label-SC_softseg.json index e1b68a2928..19d7af388d 100644 --- a/derivatives/labels_softseg/sub-queensland04/anat/sub-queensland04_space-other_T1w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-queensland04/anat/sub-queensland04_space-other_T1w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:42" + "Date": "2022-10-22 14:36:42", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-queensland04/anat/sub-queensland04_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-queensland04/anat/sub-queensland04_space-other_T2star_label-SC_softseg.json index e1b68a2928..bf50030012 100644 --- a/derivatives/labels_softseg/sub-queensland04/anat/sub-queensland04_space-other_T2star_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-queensland04/anat/sub-queensland04_space-other_T2star_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:42" + "Date": "2022-10-22 14:36:42", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-queensland04/anat/sub-queensland04_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-queensland04/anat/sub-queensland04_space-other_T2w_label-SC_softseg.json index e1b68a2928..4bbb66a72b 100644 --- a/derivatives/labels_softseg/sub-queensland04/anat/sub-queensland04_space-other_T2w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-queensland04/anat/sub-queensland04_space-other_T2w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:42" + "Date": "2022-10-22 14:36:42", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-queensland05/anat/sub-queensland05_flip-1_mt-on_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-queensland05/anat/sub-queensland05_flip-1_mt-on_space-other_MTS_label-SC_softseg.json index e1b68a2928..db93662c6e 100644 --- a/derivatives/labels_softseg/sub-queensland05/anat/sub-queensland05_flip-1_mt-on_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-queensland05/anat/sub-queensland05_flip-1_mt-on_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:42" + "Date": "2022-10-22 14:36:42", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-queensland05/anat/sub-queensland05_flip-2_mt-off_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-queensland05/anat/sub-queensland05_flip-2_mt-off_space-other_MTS_label-SC_softseg.json index a57528cfca..76f305fe51 100644 --- a/derivatives/labels_softseg/sub-queensland05/anat/sub-queensland05_flip-2_mt-off_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-queensland05/anat/sub-queensland05_flip-2_mt-off_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:43" + "Date": "2022-10-22 14:36:43", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-queensland05/anat/sub-queensland05_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-queensland05/anat/sub-queensland05_space-other_T1w_label-SC_softseg.json index a57528cfca..92b9da7662 100644 --- a/derivatives/labels_softseg/sub-queensland05/anat/sub-queensland05_space-other_T1w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-queensland05/anat/sub-queensland05_space-other_T1w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:43" + "Date": "2022-10-22 14:36:43", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-queensland05/anat/sub-queensland05_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-queensland05/anat/sub-queensland05_space-other_T2star_label-SC_softseg.json index a57528cfca..737c0ea30c 100644 --- a/derivatives/labels_softseg/sub-queensland05/anat/sub-queensland05_space-other_T2star_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-queensland05/anat/sub-queensland05_space-other_T2star_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:43" + "Date": "2022-10-22 14:36:43", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-queensland05/anat/sub-queensland05_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-queensland05/anat/sub-queensland05_space-other_T2w_label-SC_softseg.json index a57528cfca..95e8d4ea2d 100644 --- a/derivatives/labels_softseg/sub-queensland05/anat/sub-queensland05_space-other_T2w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-queensland05/anat/sub-queensland05_space-other_T2w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:43" + "Date": "2022-10-22 14:36:43", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-queensland06/anat/sub-queensland06_flip-1_mt-on_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-queensland06/anat/sub-queensland06_flip-1_mt-on_space-other_MTS_label-SC_softseg.json index a57528cfca..76f305fe51 100644 --- a/derivatives/labels_softseg/sub-queensland06/anat/sub-queensland06_flip-1_mt-on_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-queensland06/anat/sub-queensland06_flip-1_mt-on_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:43" + "Date": "2022-10-22 14:36:43", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-queensland06/anat/sub-queensland06_flip-2_mt-off_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-queensland06/anat/sub-queensland06_flip-2_mt-off_space-other_MTS_label-SC_softseg.json index a57528cfca..76f305fe51 100644 --- a/derivatives/labels_softseg/sub-queensland06/anat/sub-queensland06_flip-2_mt-off_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-queensland06/anat/sub-queensland06_flip-2_mt-off_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:43" + "Date": "2022-10-22 14:36:43", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-queensland06/anat/sub-queensland06_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-queensland06/anat/sub-queensland06_space-other_T1w_label-SC_softseg.json index a57528cfca..92b9da7662 100644 --- a/derivatives/labels_softseg/sub-queensland06/anat/sub-queensland06_space-other_T1w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-queensland06/anat/sub-queensland06_space-other_T1w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:43" + "Date": "2022-10-22 14:36:43", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-queensland06/anat/sub-queensland06_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-queensland06/anat/sub-queensland06_space-other_T2star_label-SC_softseg.json index a57528cfca..737c0ea30c 100644 --- a/derivatives/labels_softseg/sub-queensland06/anat/sub-queensland06_space-other_T2star_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-queensland06/anat/sub-queensland06_space-other_T2star_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:43" + "Date": "2022-10-22 14:36:43", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-queensland06/anat/sub-queensland06_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-queensland06/anat/sub-queensland06_space-other_T2w_label-SC_softseg.json index a57528cfca..95e8d4ea2d 100644 --- a/derivatives/labels_softseg/sub-queensland06/anat/sub-queensland06_space-other_T2w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-queensland06/anat/sub-queensland06_space-other_T2w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:43" + "Date": "2022-10-22 14:36:43", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-sherbrooke01/anat/sub-sherbrooke01_flip-1_mt-on_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-sherbrooke01/anat/sub-sherbrooke01_flip-1_mt-on_space-other_MTS_label-SC_softseg.json index a57528cfca..76f305fe51 100644 --- a/derivatives/labels_softseg/sub-sherbrooke01/anat/sub-sherbrooke01_flip-1_mt-on_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-sherbrooke01/anat/sub-sherbrooke01_flip-1_mt-on_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:43" + "Date": "2022-10-22 14:36:43", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-sherbrooke01/anat/sub-sherbrooke01_flip-2_mt-off_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-sherbrooke01/anat/sub-sherbrooke01_flip-2_mt-off_space-other_MTS_label-SC_softseg.json index a57528cfca..76f305fe51 100644 --- a/derivatives/labels_softseg/sub-sherbrooke01/anat/sub-sherbrooke01_flip-2_mt-off_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-sherbrooke01/anat/sub-sherbrooke01_flip-2_mt-off_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:43" + "Date": "2022-10-22 14:36:43", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-sherbrooke01/anat/sub-sherbrooke01_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-sherbrooke01/anat/sub-sherbrooke01_space-other_T1w_label-SC_softseg.json index a57528cfca..92b9da7662 100644 --- a/derivatives/labels_softseg/sub-sherbrooke01/anat/sub-sherbrooke01_space-other_T1w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-sherbrooke01/anat/sub-sherbrooke01_space-other_T1w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:43" + "Date": "2022-10-22 14:36:43", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-sherbrooke01/anat/sub-sherbrooke01_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-sherbrooke01/anat/sub-sherbrooke01_space-other_T2star_label-SC_softseg.json index a57528cfca..737c0ea30c 100644 --- a/derivatives/labels_softseg/sub-sherbrooke01/anat/sub-sherbrooke01_space-other_T2star_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-sherbrooke01/anat/sub-sherbrooke01_space-other_T2star_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:43" + "Date": "2022-10-22 14:36:43", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-sherbrooke01/anat/sub-sherbrooke01_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-sherbrooke01/anat/sub-sherbrooke01_space-other_T2w_label-SC_softseg.json index a57528cfca..95e8d4ea2d 100644 --- a/derivatives/labels_softseg/sub-sherbrooke01/anat/sub-sherbrooke01_space-other_T2w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-sherbrooke01/anat/sub-sherbrooke01_space-other_T2w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:43" + "Date": "2022-10-22 14:36:43", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-sherbrooke02/anat/sub-sherbrooke02_flip-1_mt-on_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-sherbrooke02/anat/sub-sherbrooke02_flip-1_mt-on_space-other_MTS_label-SC_softseg.json index a57528cfca..76f305fe51 100644 --- a/derivatives/labels_softseg/sub-sherbrooke02/anat/sub-sherbrooke02_flip-1_mt-on_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-sherbrooke02/anat/sub-sherbrooke02_flip-1_mt-on_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:43" + "Date": "2022-10-22 14:36:43", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-sherbrooke02/anat/sub-sherbrooke02_flip-2_mt-off_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-sherbrooke02/anat/sub-sherbrooke02_flip-2_mt-off_space-other_MTS_label-SC_softseg.json index a57528cfca..76f305fe51 100644 --- a/derivatives/labels_softseg/sub-sherbrooke02/anat/sub-sherbrooke02_flip-2_mt-off_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-sherbrooke02/anat/sub-sherbrooke02_flip-2_mt-off_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:43" + "Date": "2022-10-22 14:36:43", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-sherbrooke02/anat/sub-sherbrooke02_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-sherbrooke02/anat/sub-sherbrooke02_space-other_T1w_label-SC_softseg.json index 576115d796..e4998e3024 100644 --- a/derivatives/labels_softseg/sub-sherbrooke02/anat/sub-sherbrooke02_space-other_T1w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-sherbrooke02/anat/sub-sherbrooke02_space-other_T1w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:44" + "Date": "2022-10-22 14:36:44", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-sherbrooke02/anat/sub-sherbrooke02_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-sherbrooke02/anat/sub-sherbrooke02_space-other_T2star_label-SC_softseg.json index 576115d796..bc40e869a7 100644 --- a/derivatives/labels_softseg/sub-sherbrooke02/anat/sub-sherbrooke02_space-other_T2star_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-sherbrooke02/anat/sub-sherbrooke02_space-other_T2star_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:44" + "Date": "2022-10-22 14:36:44", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-sherbrooke02/anat/sub-sherbrooke02_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-sherbrooke02/anat/sub-sherbrooke02_space-other_T2w_label-SC_softseg.json index 576115d796..990dc806dc 100644 --- a/derivatives/labels_softseg/sub-sherbrooke02/anat/sub-sherbrooke02_space-other_T2w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-sherbrooke02/anat/sub-sherbrooke02_space-other_T2w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:44" + "Date": "2022-10-22 14:36:44", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-sherbrooke03/anat/sub-sherbrooke03_flip-1_mt-on_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-sherbrooke03/anat/sub-sherbrooke03_flip-1_mt-on_space-other_MTS_label-SC_softseg.json index 576115d796..9c8e7b98b7 100644 --- a/derivatives/labels_softseg/sub-sherbrooke03/anat/sub-sherbrooke03_flip-1_mt-on_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-sherbrooke03/anat/sub-sherbrooke03_flip-1_mt-on_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:44" + "Date": "2022-10-22 14:36:44", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-sherbrooke03/anat/sub-sherbrooke03_flip-2_mt-off_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-sherbrooke03/anat/sub-sherbrooke03_flip-2_mt-off_space-other_MTS_label-SC_softseg.json index 576115d796..9c8e7b98b7 100644 --- a/derivatives/labels_softseg/sub-sherbrooke03/anat/sub-sherbrooke03_flip-2_mt-off_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-sherbrooke03/anat/sub-sherbrooke03_flip-2_mt-off_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:44" + "Date": "2022-10-22 14:36:44", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-sherbrooke03/anat/sub-sherbrooke03_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-sherbrooke03/anat/sub-sherbrooke03_space-other_T1w_label-SC_softseg.json index 576115d796..e4998e3024 100644 --- a/derivatives/labels_softseg/sub-sherbrooke03/anat/sub-sherbrooke03_space-other_T1w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-sherbrooke03/anat/sub-sherbrooke03_space-other_T1w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:44" + "Date": "2022-10-22 14:36:44", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-sherbrooke03/anat/sub-sherbrooke03_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-sherbrooke03/anat/sub-sherbrooke03_space-other_T2star_label-SC_softseg.json index 576115d796..bc40e869a7 100644 --- a/derivatives/labels_softseg/sub-sherbrooke03/anat/sub-sherbrooke03_space-other_T2star_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-sherbrooke03/anat/sub-sherbrooke03_space-other_T2star_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:44" + "Date": "2022-10-22 14:36:44", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-sherbrooke03/anat/sub-sherbrooke03_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-sherbrooke03/anat/sub-sherbrooke03_space-other_T2w_label-SC_softseg.json index 576115d796..990dc806dc 100644 --- a/derivatives/labels_softseg/sub-sherbrooke03/anat/sub-sherbrooke03_space-other_T2w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-sherbrooke03/anat/sub-sherbrooke03_space-other_T2w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:44" + "Date": "2022-10-22 14:36:44", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-sherbrooke04/anat/sub-sherbrooke04_flip-1_mt-on_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-sherbrooke04/anat/sub-sherbrooke04_flip-1_mt-on_space-other_MTS_label-SC_softseg.json index 576115d796..9c8e7b98b7 100644 --- a/derivatives/labels_softseg/sub-sherbrooke04/anat/sub-sherbrooke04_flip-1_mt-on_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-sherbrooke04/anat/sub-sherbrooke04_flip-1_mt-on_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:44" + "Date": "2022-10-22 14:36:44", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-sherbrooke04/anat/sub-sherbrooke04_flip-2_mt-off_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-sherbrooke04/anat/sub-sherbrooke04_flip-2_mt-off_space-other_MTS_label-SC_softseg.json index 576115d796..9c8e7b98b7 100644 --- a/derivatives/labels_softseg/sub-sherbrooke04/anat/sub-sherbrooke04_flip-2_mt-off_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-sherbrooke04/anat/sub-sherbrooke04_flip-2_mt-off_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:44" + "Date": "2022-10-22 14:36:44", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-sherbrooke04/anat/sub-sherbrooke04_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-sherbrooke04/anat/sub-sherbrooke04_space-other_T1w_label-SC_softseg.json index 576115d796..e4998e3024 100644 --- a/derivatives/labels_softseg/sub-sherbrooke04/anat/sub-sherbrooke04_space-other_T1w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-sherbrooke04/anat/sub-sherbrooke04_space-other_T1w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:44" + "Date": "2022-10-22 14:36:44", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-sherbrooke04/anat/sub-sherbrooke04_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-sherbrooke04/anat/sub-sherbrooke04_space-other_T2star_label-SC_softseg.json index 576115d796..bc40e869a7 100644 --- a/derivatives/labels_softseg/sub-sherbrooke04/anat/sub-sherbrooke04_space-other_T2star_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-sherbrooke04/anat/sub-sherbrooke04_space-other_T2star_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:44" + "Date": "2022-10-22 14:36:44", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-sherbrooke04/anat/sub-sherbrooke04_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-sherbrooke04/anat/sub-sherbrooke04_space-other_T2w_label-SC_softseg.json index 576115d796..990dc806dc 100644 --- a/derivatives/labels_softseg/sub-sherbrooke04/anat/sub-sherbrooke04_space-other_T2w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-sherbrooke04/anat/sub-sherbrooke04_space-other_T2w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:44" + "Date": "2022-10-22 14:36:44", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-sherbrooke05/anat/sub-sherbrooke05_flip-1_mt-on_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-sherbrooke05/anat/sub-sherbrooke05_flip-1_mt-on_space-other_MTS_label-SC_softseg.json index 576115d796..9c8e7b98b7 100644 --- a/derivatives/labels_softseg/sub-sherbrooke05/anat/sub-sherbrooke05_flip-1_mt-on_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-sherbrooke05/anat/sub-sherbrooke05_flip-1_mt-on_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:44" + "Date": "2022-10-22 14:36:44", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-sherbrooke05/anat/sub-sherbrooke05_flip-2_mt-off_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-sherbrooke05/anat/sub-sherbrooke05_flip-2_mt-off_space-other_MTS_label-SC_softseg.json index 576115d796..9c8e7b98b7 100644 --- a/derivatives/labels_softseg/sub-sherbrooke05/anat/sub-sherbrooke05_flip-2_mt-off_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-sherbrooke05/anat/sub-sherbrooke05_flip-2_mt-off_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:44" + "Date": "2022-10-22 14:36:44", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-sherbrooke05/anat/sub-sherbrooke05_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-sherbrooke05/anat/sub-sherbrooke05_space-other_T1w_label-SC_softseg.json index 576115d796..e4998e3024 100644 --- a/derivatives/labels_softseg/sub-sherbrooke05/anat/sub-sherbrooke05_space-other_T1w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-sherbrooke05/anat/sub-sherbrooke05_space-other_T1w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:44" + "Date": "2022-10-22 14:36:44", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-sherbrooke05/anat/sub-sherbrooke05_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-sherbrooke05/anat/sub-sherbrooke05_space-other_T2star_label-SC_softseg.json index 576115d796..bc40e869a7 100644 --- a/derivatives/labels_softseg/sub-sherbrooke05/anat/sub-sherbrooke05_space-other_T2star_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-sherbrooke05/anat/sub-sherbrooke05_space-other_T2star_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:44" + "Date": "2022-10-22 14:36:44", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-sherbrooke05/anat/sub-sherbrooke05_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-sherbrooke05/anat/sub-sherbrooke05_space-other_T2w_label-SC_softseg.json index 576115d796..990dc806dc 100644 --- a/derivatives/labels_softseg/sub-sherbrooke05/anat/sub-sherbrooke05_space-other_T2w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-sherbrooke05/anat/sub-sherbrooke05_space-other_T2w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:44" + "Date": "2022-10-22 14:36:44", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-sherbrooke06/anat/sub-sherbrooke06_flip-1_mt-on_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-sherbrooke06/anat/sub-sherbrooke06_flip-1_mt-on_space-other_MTS_label-SC_softseg.json index 576115d796..9c8e7b98b7 100644 --- a/derivatives/labels_softseg/sub-sherbrooke06/anat/sub-sherbrooke06_flip-1_mt-on_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-sherbrooke06/anat/sub-sherbrooke06_flip-1_mt-on_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:44" + "Date": "2022-10-22 14:36:44", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-sherbrooke06/anat/sub-sherbrooke06_flip-2_mt-off_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-sherbrooke06/anat/sub-sherbrooke06_flip-2_mt-off_space-other_MTS_label-SC_softseg.json index 576115d796..9c8e7b98b7 100644 --- a/derivatives/labels_softseg/sub-sherbrooke06/anat/sub-sherbrooke06_flip-2_mt-off_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-sherbrooke06/anat/sub-sherbrooke06_flip-2_mt-off_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:44" + "Date": "2022-10-22 14:36:44", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-sherbrooke06/anat/sub-sherbrooke06_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-sherbrooke06/anat/sub-sherbrooke06_space-other_T1w_label-SC_softseg.json index ed8f653a86..0a69cbe5d1 100644 --- a/derivatives/labels_softseg/sub-sherbrooke06/anat/sub-sherbrooke06_space-other_T1w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-sherbrooke06/anat/sub-sherbrooke06_space-other_T1w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:45" + "Date": "2022-10-22 14:36:45", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-sherbrooke06/anat/sub-sherbrooke06_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-sherbrooke06/anat/sub-sherbrooke06_space-other_T2star_label-SC_softseg.json index ed8f653a86..30220bfae8 100644 --- a/derivatives/labels_softseg/sub-sherbrooke06/anat/sub-sherbrooke06_space-other_T2star_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-sherbrooke06/anat/sub-sherbrooke06_space-other_T2star_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:45" + "Date": "2022-10-22 14:36:45", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-sherbrooke06/anat/sub-sherbrooke06_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-sherbrooke06/anat/sub-sherbrooke06_space-other_T2w_label-SC_softseg.json index ed8f653a86..b68638c7a4 100644 --- a/derivatives/labels_softseg/sub-sherbrooke06/anat/sub-sherbrooke06_space-other_T2w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-sherbrooke06/anat/sub-sherbrooke06_space-other_T2w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:45" + "Date": "2022-10-22 14:36:45", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-sherbrooke07/anat/sub-sherbrooke07_flip-1_mt-on_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-sherbrooke07/anat/sub-sherbrooke07_flip-1_mt-on_space-other_MTS_label-SC_softseg.json index ed8f653a86..694c8788ff 100644 --- a/derivatives/labels_softseg/sub-sherbrooke07/anat/sub-sherbrooke07_flip-1_mt-on_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-sherbrooke07/anat/sub-sherbrooke07_flip-1_mt-on_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:45" + "Date": "2022-10-22 14:36:45", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-sherbrooke07/anat/sub-sherbrooke07_flip-2_mt-off_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-sherbrooke07/anat/sub-sherbrooke07_flip-2_mt-off_space-other_MTS_label-SC_softseg.json index ed8f653a86..694c8788ff 100644 --- a/derivatives/labels_softseg/sub-sherbrooke07/anat/sub-sherbrooke07_flip-2_mt-off_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-sherbrooke07/anat/sub-sherbrooke07_flip-2_mt-off_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:45" + "Date": "2022-10-22 14:36:45", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-sherbrooke07/anat/sub-sherbrooke07_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-sherbrooke07/anat/sub-sherbrooke07_space-other_T1w_label-SC_softseg.json index ed8f653a86..0a69cbe5d1 100644 --- a/derivatives/labels_softseg/sub-sherbrooke07/anat/sub-sherbrooke07_space-other_T1w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-sherbrooke07/anat/sub-sherbrooke07_space-other_T1w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:45" + "Date": "2022-10-22 14:36:45", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-sherbrooke07/anat/sub-sherbrooke07_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-sherbrooke07/anat/sub-sherbrooke07_space-other_T2star_label-SC_softseg.json index ed8f653a86..30220bfae8 100644 --- a/derivatives/labels_softseg/sub-sherbrooke07/anat/sub-sherbrooke07_space-other_T2star_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-sherbrooke07/anat/sub-sherbrooke07_space-other_T2star_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:45" + "Date": "2022-10-22 14:36:45", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-sherbrooke07/anat/sub-sherbrooke07_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-sherbrooke07/anat/sub-sherbrooke07_space-other_T2w_label-SC_softseg.json index ed8f653a86..b68638c7a4 100644 --- a/derivatives/labels_softseg/sub-sherbrooke07/anat/sub-sherbrooke07_space-other_T2w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-sherbrooke07/anat/sub-sherbrooke07_space-other_T2w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:45" + "Date": "2022-10-22 14:36:45", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-stanford01/anat/sub-stanford01_flip-1_mt-on_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-stanford01/anat/sub-stanford01_flip-1_mt-on_space-other_MTS_label-SC_softseg.json index ed8f653a86..694c8788ff 100644 --- a/derivatives/labels_softseg/sub-stanford01/anat/sub-stanford01_flip-1_mt-on_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-stanford01/anat/sub-stanford01_flip-1_mt-on_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:45" + "Date": "2022-10-22 14:36:45", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-stanford01/anat/sub-stanford01_flip-2_mt-off_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-stanford01/anat/sub-stanford01_flip-2_mt-off_space-other_MTS_label-SC_softseg.json index ed8f653a86..694c8788ff 100644 --- a/derivatives/labels_softseg/sub-stanford01/anat/sub-stanford01_flip-2_mt-off_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-stanford01/anat/sub-stanford01_flip-2_mt-off_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:45" + "Date": "2022-10-22 14:36:45", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-stanford01/anat/sub-stanford01_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-stanford01/anat/sub-stanford01_space-other_T1w_label-SC_softseg.json index ed8f653a86..0a69cbe5d1 100644 --- a/derivatives/labels_softseg/sub-stanford01/anat/sub-stanford01_space-other_T1w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-stanford01/anat/sub-stanford01_space-other_T1w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:45" + "Date": "2022-10-22 14:36:45", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-stanford01/anat/sub-stanford01_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-stanford01/anat/sub-stanford01_space-other_T2star_label-SC_softseg.json index ed8f653a86..30220bfae8 100644 --- a/derivatives/labels_softseg/sub-stanford01/anat/sub-stanford01_space-other_T2star_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-stanford01/anat/sub-stanford01_space-other_T2star_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:45" + "Date": "2022-10-22 14:36:45", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-stanford01/anat/sub-stanford01_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-stanford01/anat/sub-stanford01_space-other_T2w_label-SC_softseg.json index ed8f653a86..b68638c7a4 100644 --- a/derivatives/labels_softseg/sub-stanford01/anat/sub-stanford01_space-other_T2w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-stanford01/anat/sub-stanford01_space-other_T2w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:45" + "Date": "2022-10-22 14:36:45", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-stanford02/anat/sub-stanford02_flip-1_mt-on_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-stanford02/anat/sub-stanford02_flip-1_mt-on_space-other_MTS_label-SC_softseg.json index ed8f653a86..694c8788ff 100644 --- a/derivatives/labels_softseg/sub-stanford02/anat/sub-stanford02_flip-1_mt-on_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-stanford02/anat/sub-stanford02_flip-1_mt-on_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:45" + "Date": "2022-10-22 14:36:45", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-stanford02/anat/sub-stanford02_flip-2_mt-off_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-stanford02/anat/sub-stanford02_flip-2_mt-off_space-other_MTS_label-SC_softseg.json index ed8f653a86..694c8788ff 100644 --- a/derivatives/labels_softseg/sub-stanford02/anat/sub-stanford02_flip-2_mt-off_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-stanford02/anat/sub-stanford02_flip-2_mt-off_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:45" + "Date": "2022-10-22 14:36:45", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-stanford02/anat/sub-stanford02_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-stanford02/anat/sub-stanford02_space-other_T1w_label-SC_softseg.json index ed8f653a86..0a69cbe5d1 100644 --- a/derivatives/labels_softseg/sub-stanford02/anat/sub-stanford02_space-other_T1w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-stanford02/anat/sub-stanford02_space-other_T1w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:45" + "Date": "2022-10-22 14:36:45", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-stanford02/anat/sub-stanford02_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-stanford02/anat/sub-stanford02_space-other_T2star_label-SC_softseg.json index ed8f653a86..30220bfae8 100644 --- a/derivatives/labels_softseg/sub-stanford02/anat/sub-stanford02_space-other_T2star_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-stanford02/anat/sub-stanford02_space-other_T2star_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:45" + "Date": "2022-10-22 14:36:45", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-stanford02/anat/sub-stanford02_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-stanford02/anat/sub-stanford02_space-other_T2w_label-SC_softseg.json index ed8f653a86..b68638c7a4 100644 --- a/derivatives/labels_softseg/sub-stanford02/anat/sub-stanford02_space-other_T2w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-stanford02/anat/sub-stanford02_space-other_T2w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:45" + "Date": "2022-10-22 14:36:45", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-stanford03/anat/sub-stanford03_flip-1_mt-on_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-stanford03/anat/sub-stanford03_flip-1_mt-on_space-other_MTS_label-SC_softseg.json index ed8f653a86..694c8788ff 100644 --- a/derivatives/labels_softseg/sub-stanford03/anat/sub-stanford03_flip-1_mt-on_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-stanford03/anat/sub-stanford03_flip-1_mt-on_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:45" + "Date": "2022-10-22 14:36:45", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-stanford03/anat/sub-stanford03_flip-2_mt-off_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-stanford03/anat/sub-stanford03_flip-2_mt-off_space-other_MTS_label-SC_softseg.json index ed8f653a86..694c8788ff 100644 --- a/derivatives/labels_softseg/sub-stanford03/anat/sub-stanford03_flip-2_mt-off_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-stanford03/anat/sub-stanford03_flip-2_mt-off_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:45" + "Date": "2022-10-22 14:36:45", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-stanford03/anat/sub-stanford03_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-stanford03/anat/sub-stanford03_space-other_T1w_label-SC_softseg.json index ed8f653a86..0a69cbe5d1 100644 --- a/derivatives/labels_softseg/sub-stanford03/anat/sub-stanford03_space-other_T1w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-stanford03/anat/sub-stanford03_space-other_T1w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:45" + "Date": "2022-10-22 14:36:45", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-stanford03/anat/sub-stanford03_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-stanford03/anat/sub-stanford03_space-other_T2star_label-SC_softseg.json index ed8f653a86..30220bfae8 100644 --- a/derivatives/labels_softseg/sub-stanford03/anat/sub-stanford03_space-other_T2star_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-stanford03/anat/sub-stanford03_space-other_T2star_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:45" + "Date": "2022-10-22 14:36:45", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-stanford03/anat/sub-stanford03_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-stanford03/anat/sub-stanford03_space-other_T2w_label-SC_softseg.json index ed8f653a86..b68638c7a4 100644 --- a/derivatives/labels_softseg/sub-stanford03/anat/sub-stanford03_space-other_T2w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-stanford03/anat/sub-stanford03_space-other_T2w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:45" + "Date": "2022-10-22 14:36:45", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-stanford04/anat/sub-stanford04_flip-1_mt-on_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-stanford04/anat/sub-stanford04_flip-1_mt-on_space-other_MTS_label-SC_softseg.json index 262635f88a..27281765ad 100644 --- a/derivatives/labels_softseg/sub-stanford04/anat/sub-stanford04_flip-1_mt-on_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-stanford04/anat/sub-stanford04_flip-1_mt-on_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:46" + "Date": "2022-10-22 14:36:46", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-stanford04/anat/sub-stanford04_flip-2_mt-off_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-stanford04/anat/sub-stanford04_flip-2_mt-off_space-other_MTS_label-SC_softseg.json index 262635f88a..27281765ad 100644 --- a/derivatives/labels_softseg/sub-stanford04/anat/sub-stanford04_flip-2_mt-off_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-stanford04/anat/sub-stanford04_flip-2_mt-off_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:46" + "Date": "2022-10-22 14:36:46", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-stanford04/anat/sub-stanford04_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-stanford04/anat/sub-stanford04_space-other_T1w_label-SC_softseg.json index 262635f88a..7ccf096079 100644 --- a/derivatives/labels_softseg/sub-stanford04/anat/sub-stanford04_space-other_T1w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-stanford04/anat/sub-stanford04_space-other_T1w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:46" + "Date": "2022-10-22 14:36:46", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-stanford04/anat/sub-stanford04_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-stanford04/anat/sub-stanford04_space-other_T2star_label-SC_softseg.json index 262635f88a..03c237b3e5 100644 --- a/derivatives/labels_softseg/sub-stanford04/anat/sub-stanford04_space-other_T2star_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-stanford04/anat/sub-stanford04_space-other_T2star_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:46" + "Date": "2022-10-22 14:36:46", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-stanford04/anat/sub-stanford04_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-stanford04/anat/sub-stanford04_space-other_T2w_label-SC_softseg.json index 262635f88a..ce3643d8d3 100644 --- a/derivatives/labels_softseg/sub-stanford04/anat/sub-stanford04_space-other_T2w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-stanford04/anat/sub-stanford04_space-other_T2w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:46" + "Date": "2022-10-22 14:36:46", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-stanford05/anat/sub-stanford05_flip-1_mt-on_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-stanford05/anat/sub-stanford05_flip-1_mt-on_space-other_MTS_label-SC_softseg.json index 262635f88a..27281765ad 100644 --- a/derivatives/labels_softseg/sub-stanford05/anat/sub-stanford05_flip-1_mt-on_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-stanford05/anat/sub-stanford05_flip-1_mt-on_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:46" + "Date": "2022-10-22 14:36:46", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-stanford05/anat/sub-stanford05_flip-2_mt-off_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-stanford05/anat/sub-stanford05_flip-2_mt-off_space-other_MTS_label-SC_softseg.json index 262635f88a..27281765ad 100644 --- a/derivatives/labels_softseg/sub-stanford05/anat/sub-stanford05_flip-2_mt-off_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-stanford05/anat/sub-stanford05_flip-2_mt-off_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:46" + "Date": "2022-10-22 14:36:46", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-stanford05/anat/sub-stanford05_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-stanford05/anat/sub-stanford05_space-other_T1w_label-SC_softseg.json index 262635f88a..7ccf096079 100644 --- a/derivatives/labels_softseg/sub-stanford05/anat/sub-stanford05_space-other_T1w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-stanford05/anat/sub-stanford05_space-other_T1w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:46" + "Date": "2022-10-22 14:36:46", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-stanford05/anat/sub-stanford05_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-stanford05/anat/sub-stanford05_space-other_T2star_label-SC_softseg.json index 262635f88a..03c237b3e5 100644 --- a/derivatives/labels_softseg/sub-stanford05/anat/sub-stanford05_space-other_T2star_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-stanford05/anat/sub-stanford05_space-other_T2star_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:46" + "Date": "2022-10-22 14:36:46", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-stanford05/anat/sub-stanford05_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-stanford05/anat/sub-stanford05_space-other_T2w_label-SC_softseg.json index 262635f88a..ce3643d8d3 100644 --- a/derivatives/labels_softseg/sub-stanford05/anat/sub-stanford05_space-other_T2w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-stanford05/anat/sub-stanford05_space-other_T2w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:46" + "Date": "2022-10-22 14:36:46", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-stanford06/anat/sub-stanford06_flip-1_mt-on_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-stanford06/anat/sub-stanford06_flip-1_mt-on_space-other_MTS_label-SC_softseg.json index 262635f88a..27281765ad 100644 --- a/derivatives/labels_softseg/sub-stanford06/anat/sub-stanford06_flip-1_mt-on_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-stanford06/anat/sub-stanford06_flip-1_mt-on_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:46" + "Date": "2022-10-22 14:36:46", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-stanford06/anat/sub-stanford06_flip-2_mt-off_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-stanford06/anat/sub-stanford06_flip-2_mt-off_space-other_MTS_label-SC_softseg.json index 262635f88a..27281765ad 100644 --- a/derivatives/labels_softseg/sub-stanford06/anat/sub-stanford06_flip-2_mt-off_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-stanford06/anat/sub-stanford06_flip-2_mt-off_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:46" + "Date": "2022-10-22 14:36:46", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-stanford06/anat/sub-stanford06_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-stanford06/anat/sub-stanford06_space-other_T1w_label-SC_softseg.json index 262635f88a..7ccf096079 100644 --- a/derivatives/labels_softseg/sub-stanford06/anat/sub-stanford06_space-other_T1w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-stanford06/anat/sub-stanford06_space-other_T1w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:46" + "Date": "2022-10-22 14:36:46", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-stanford06/anat/sub-stanford06_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-stanford06/anat/sub-stanford06_space-other_T2star_label-SC_softseg.json index 262635f88a..03c237b3e5 100644 --- a/derivatives/labels_softseg/sub-stanford06/anat/sub-stanford06_space-other_T2star_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-stanford06/anat/sub-stanford06_space-other_T2star_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:46" + "Date": "2022-10-22 14:36:46", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-stanford06/anat/sub-stanford06_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-stanford06/anat/sub-stanford06_space-other_T2w_label-SC_softseg.json index 262635f88a..ce3643d8d3 100644 --- a/derivatives/labels_softseg/sub-stanford06/anat/sub-stanford06_space-other_T2w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-stanford06/anat/sub-stanford06_space-other_T2w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:46" + "Date": "2022-10-22 14:36:46", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-strasbourg01/anat/sub-strasbourg01_flip-1_mt-on_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-strasbourg01/anat/sub-strasbourg01_flip-1_mt-on_space-other_MTS_label-SC_softseg.json index 262635f88a..27281765ad 100644 --- a/derivatives/labels_softseg/sub-strasbourg01/anat/sub-strasbourg01_flip-1_mt-on_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-strasbourg01/anat/sub-strasbourg01_flip-1_mt-on_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:46" + "Date": "2022-10-22 14:36:46", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-strasbourg01/anat/sub-strasbourg01_flip-2_mt-off_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-strasbourg01/anat/sub-strasbourg01_flip-2_mt-off_space-other_MTS_label-SC_softseg.json index 262635f88a..27281765ad 100644 --- a/derivatives/labels_softseg/sub-strasbourg01/anat/sub-strasbourg01_flip-2_mt-off_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-strasbourg01/anat/sub-strasbourg01_flip-2_mt-off_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:46" + "Date": "2022-10-22 14:36:46", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-strasbourg01/anat/sub-strasbourg01_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-strasbourg01/anat/sub-strasbourg01_space-other_T1w_label-SC_softseg.json index 262635f88a..7ccf096079 100644 --- a/derivatives/labels_softseg/sub-strasbourg01/anat/sub-strasbourg01_space-other_T1w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-strasbourg01/anat/sub-strasbourg01_space-other_T1w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:46" + "Date": "2022-10-22 14:36:46", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-strasbourg01/anat/sub-strasbourg01_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-strasbourg01/anat/sub-strasbourg01_space-other_T2star_label-SC_softseg.json index 7de3cf067a..fcdbde584a 100644 --- a/derivatives/labels_softseg/sub-strasbourg01/anat/sub-strasbourg01_space-other_T2star_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-strasbourg01/anat/sub-strasbourg01_space-other_T2star_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:47" + "Date": "2022-10-22 14:36:47", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-strasbourg01/anat/sub-strasbourg01_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-strasbourg01/anat/sub-strasbourg01_space-other_T2w_label-SC_softseg.json index 7de3cf067a..c251d1b51b 100644 --- a/derivatives/labels_softseg/sub-strasbourg01/anat/sub-strasbourg01_space-other_T2w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-strasbourg01/anat/sub-strasbourg01_space-other_T2w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:47" + "Date": "2022-10-22 14:36:47", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-strasbourg02/anat/sub-strasbourg02_flip-1_mt-on_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-strasbourg02/anat/sub-strasbourg02_flip-1_mt-on_space-other_MTS_label-SC_softseg.json index 7de3cf067a..3450703d8c 100644 --- a/derivatives/labels_softseg/sub-strasbourg02/anat/sub-strasbourg02_flip-1_mt-on_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-strasbourg02/anat/sub-strasbourg02_flip-1_mt-on_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:47" + "Date": "2022-10-22 14:36:47", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-strasbourg02/anat/sub-strasbourg02_flip-2_mt-off_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-strasbourg02/anat/sub-strasbourg02_flip-2_mt-off_space-other_MTS_label-SC_softseg.json index 7de3cf067a..3450703d8c 100644 --- a/derivatives/labels_softseg/sub-strasbourg02/anat/sub-strasbourg02_flip-2_mt-off_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-strasbourg02/anat/sub-strasbourg02_flip-2_mt-off_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:47" + "Date": "2022-10-22 14:36:47", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-strasbourg02/anat/sub-strasbourg02_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-strasbourg02/anat/sub-strasbourg02_space-other_T1w_label-SC_softseg.json index 7de3cf067a..4f77d7feec 100644 --- a/derivatives/labels_softseg/sub-strasbourg02/anat/sub-strasbourg02_space-other_T1w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-strasbourg02/anat/sub-strasbourg02_space-other_T1w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:47" + "Date": "2022-10-22 14:36:47", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-strasbourg02/anat/sub-strasbourg02_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-strasbourg02/anat/sub-strasbourg02_space-other_T2star_label-SC_softseg.json index 7de3cf067a..fcdbde584a 100644 --- a/derivatives/labels_softseg/sub-strasbourg02/anat/sub-strasbourg02_space-other_T2star_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-strasbourg02/anat/sub-strasbourg02_space-other_T2star_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:47" + "Date": "2022-10-22 14:36:47", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-strasbourg02/anat/sub-strasbourg02_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-strasbourg02/anat/sub-strasbourg02_space-other_T2w_label-SC_softseg.json index 7de3cf067a..c251d1b51b 100644 --- a/derivatives/labels_softseg/sub-strasbourg02/anat/sub-strasbourg02_space-other_T2w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-strasbourg02/anat/sub-strasbourg02_space-other_T2w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:47" + "Date": "2022-10-22 14:36:47", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-strasbourg03/anat/sub-strasbourg03_flip-1_mt-on_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-strasbourg03/anat/sub-strasbourg03_flip-1_mt-on_space-other_MTS_label-SC_softseg.json index 7de3cf067a..3450703d8c 100644 --- a/derivatives/labels_softseg/sub-strasbourg03/anat/sub-strasbourg03_flip-1_mt-on_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-strasbourg03/anat/sub-strasbourg03_flip-1_mt-on_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:47" + "Date": "2022-10-22 14:36:47", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-strasbourg03/anat/sub-strasbourg03_flip-2_mt-off_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-strasbourg03/anat/sub-strasbourg03_flip-2_mt-off_space-other_MTS_label-SC_softseg.json index 7de3cf067a..3450703d8c 100644 --- a/derivatives/labels_softseg/sub-strasbourg03/anat/sub-strasbourg03_flip-2_mt-off_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-strasbourg03/anat/sub-strasbourg03_flip-2_mt-off_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:47" + "Date": "2022-10-22 14:36:47", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-strasbourg03/anat/sub-strasbourg03_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-strasbourg03/anat/sub-strasbourg03_space-other_T1w_label-SC_softseg.json index 7de3cf067a..4f77d7feec 100644 --- a/derivatives/labels_softseg/sub-strasbourg03/anat/sub-strasbourg03_space-other_T1w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-strasbourg03/anat/sub-strasbourg03_space-other_T1w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:47" + "Date": "2022-10-22 14:36:47", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-strasbourg03/anat/sub-strasbourg03_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-strasbourg03/anat/sub-strasbourg03_space-other_T2star_label-SC_softseg.json index 7de3cf067a..fcdbde584a 100644 --- a/derivatives/labels_softseg/sub-strasbourg03/anat/sub-strasbourg03_space-other_T2star_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-strasbourg03/anat/sub-strasbourg03_space-other_T2star_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:47" + "Date": "2022-10-22 14:36:47", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-strasbourg03/anat/sub-strasbourg03_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-strasbourg03/anat/sub-strasbourg03_space-other_T2w_label-SC_softseg.json index 7de3cf067a..c251d1b51b 100644 --- a/derivatives/labels_softseg/sub-strasbourg03/anat/sub-strasbourg03_space-other_T2w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-strasbourg03/anat/sub-strasbourg03_space-other_T2w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:47" + "Date": "2022-10-22 14:36:47", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-strasbourg04/anat/sub-strasbourg04_flip-1_mt-on_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-strasbourg04/anat/sub-strasbourg04_flip-1_mt-on_space-other_MTS_label-SC_softseg.json index 7de3cf067a..3450703d8c 100644 --- a/derivatives/labels_softseg/sub-strasbourg04/anat/sub-strasbourg04_flip-1_mt-on_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-strasbourg04/anat/sub-strasbourg04_flip-1_mt-on_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:47" + "Date": "2022-10-22 14:36:47", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-strasbourg04/anat/sub-strasbourg04_flip-2_mt-off_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-strasbourg04/anat/sub-strasbourg04_flip-2_mt-off_space-other_MTS_label-SC_softseg.json index 7de3cf067a..3450703d8c 100644 --- a/derivatives/labels_softseg/sub-strasbourg04/anat/sub-strasbourg04_flip-2_mt-off_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-strasbourg04/anat/sub-strasbourg04_flip-2_mt-off_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:47" + "Date": "2022-10-22 14:36:47", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-strasbourg04/anat/sub-strasbourg04_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-strasbourg04/anat/sub-strasbourg04_space-other_T1w_label-SC_softseg.json index 7de3cf067a..4f77d7feec 100644 --- a/derivatives/labels_softseg/sub-strasbourg04/anat/sub-strasbourg04_space-other_T1w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-strasbourg04/anat/sub-strasbourg04_space-other_T1w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:47" + "Date": "2022-10-22 14:36:47", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-strasbourg04/anat/sub-strasbourg04_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-strasbourg04/anat/sub-strasbourg04_space-other_T2star_label-SC_softseg.json index 7de3cf067a..fcdbde584a 100644 --- a/derivatives/labels_softseg/sub-strasbourg04/anat/sub-strasbourg04_space-other_T2star_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-strasbourg04/anat/sub-strasbourg04_space-other_T2star_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:47" + "Date": "2022-10-22 14:36:47", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-strasbourg04/anat/sub-strasbourg04_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-strasbourg04/anat/sub-strasbourg04_space-other_T2w_label-SC_softseg.json index 7de3cf067a..c251d1b51b 100644 --- a/derivatives/labels_softseg/sub-strasbourg04/anat/sub-strasbourg04_space-other_T2w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-strasbourg04/anat/sub-strasbourg04_space-other_T2w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:47" + "Date": "2022-10-22 14:36:47", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-strasbourg05/anat/sub-strasbourg05_flip-1_mt-on_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-strasbourg05/anat/sub-strasbourg05_flip-1_mt-on_space-other_MTS_label-SC_softseg.json index 7de3cf067a..3450703d8c 100644 --- a/derivatives/labels_softseg/sub-strasbourg05/anat/sub-strasbourg05_flip-1_mt-on_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-strasbourg05/anat/sub-strasbourg05_flip-1_mt-on_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:47" + "Date": "2022-10-22 14:36:47", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-strasbourg05/anat/sub-strasbourg05_flip-2_mt-off_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-strasbourg05/anat/sub-strasbourg05_flip-2_mt-off_space-other_MTS_label-SC_softseg.json index 7de3cf067a..3450703d8c 100644 --- a/derivatives/labels_softseg/sub-strasbourg05/anat/sub-strasbourg05_flip-2_mt-off_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-strasbourg05/anat/sub-strasbourg05_flip-2_mt-off_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:47" + "Date": "2022-10-22 14:36:47", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-strasbourg05/anat/sub-strasbourg05_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-strasbourg05/anat/sub-strasbourg05_space-other_T1w_label-SC_softseg.json index 7de3cf067a..4f77d7feec 100644 --- a/derivatives/labels_softseg/sub-strasbourg05/anat/sub-strasbourg05_space-other_T1w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-strasbourg05/anat/sub-strasbourg05_space-other_T1w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:47" + "Date": "2022-10-22 14:36:47", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-strasbourg05/anat/sub-strasbourg05_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-strasbourg05/anat/sub-strasbourg05_space-other_T2star_label-SC_softseg.json index 7de3cf067a..fcdbde584a 100644 --- a/derivatives/labels_softseg/sub-strasbourg05/anat/sub-strasbourg05_space-other_T2star_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-strasbourg05/anat/sub-strasbourg05_space-other_T2star_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:47" + "Date": "2022-10-22 14:36:47", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-strasbourg05/anat/sub-strasbourg05_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-strasbourg05/anat/sub-strasbourg05_space-other_T2w_label-SC_softseg.json index 7de3cf067a..c251d1b51b 100644 --- a/derivatives/labels_softseg/sub-strasbourg05/anat/sub-strasbourg05_space-other_T2w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-strasbourg05/anat/sub-strasbourg05_space-other_T2w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:47" + "Date": "2022-10-22 14:36:47", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-strasbourg06/anat/sub-strasbourg06_flip-1_mt-on_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-strasbourg06/anat/sub-strasbourg06_flip-1_mt-on_space-other_MTS_label-SC_softseg.json index 7de3cf067a..3450703d8c 100644 --- a/derivatives/labels_softseg/sub-strasbourg06/anat/sub-strasbourg06_flip-1_mt-on_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-strasbourg06/anat/sub-strasbourg06_flip-1_mt-on_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:47" + "Date": "2022-10-22 14:36:47", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-strasbourg06/anat/sub-strasbourg06_flip-2_mt-off_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-strasbourg06/anat/sub-strasbourg06_flip-2_mt-off_space-other_MTS_label-SC_softseg.json index 7de3cf067a..3450703d8c 100644 --- a/derivatives/labels_softseg/sub-strasbourg06/anat/sub-strasbourg06_flip-2_mt-off_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-strasbourg06/anat/sub-strasbourg06_flip-2_mt-off_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:47" + "Date": "2022-10-22 14:36:47", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-strasbourg06/anat/sub-strasbourg06_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-strasbourg06/anat/sub-strasbourg06_space-other_T1w_label-SC_softseg.json index 7de3cf067a..4f77d7feec 100644 --- a/derivatives/labels_softseg/sub-strasbourg06/anat/sub-strasbourg06_space-other_T1w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-strasbourg06/anat/sub-strasbourg06_space-other_T1w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:47" + "Date": "2022-10-22 14:36:47", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-strasbourg06/anat/sub-strasbourg06_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-strasbourg06/anat/sub-strasbourg06_space-other_T2star_label-SC_softseg.json index cb1ada3a45..8d9d298753 100644 --- a/derivatives/labels_softseg/sub-strasbourg06/anat/sub-strasbourg06_space-other_T2star_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-strasbourg06/anat/sub-strasbourg06_space-other_T2star_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:48" + "Date": "2022-10-22 14:36:48", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-strasbourg06/anat/sub-strasbourg06_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-strasbourg06/anat/sub-strasbourg06_space-other_T2w_label-SC_softseg.json index cb1ada3a45..55f98278cf 100644 --- a/derivatives/labels_softseg/sub-strasbourg06/anat/sub-strasbourg06_space-other_T2w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-strasbourg06/anat/sub-strasbourg06_space-other_T2w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:48" + "Date": "2022-10-22 14:36:48", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-tehranS01/anat/sub-tehranS01_flip-1_mt-on_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-tehranS01/anat/sub-tehranS01_flip-1_mt-on_space-other_MTS_label-SC_softseg.json index cb1ada3a45..033c72efc0 100644 --- a/derivatives/labels_softseg/sub-tehranS01/anat/sub-tehranS01_flip-1_mt-on_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-tehranS01/anat/sub-tehranS01_flip-1_mt-on_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:48" + "Date": "2022-10-22 14:36:48", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-tehranS01/anat/sub-tehranS01_flip-2_mt-off_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-tehranS01/anat/sub-tehranS01_flip-2_mt-off_space-other_MTS_label-SC_softseg.json index cb1ada3a45..033c72efc0 100644 --- a/derivatives/labels_softseg/sub-tehranS01/anat/sub-tehranS01_flip-2_mt-off_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-tehranS01/anat/sub-tehranS01_flip-2_mt-off_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:48" + "Date": "2022-10-22 14:36:48", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-tehranS01/anat/sub-tehranS01_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-tehranS01/anat/sub-tehranS01_space-other_T1w_label-SC_softseg.json index cb1ada3a45..958f8cdb87 100644 --- a/derivatives/labels_softseg/sub-tehranS01/anat/sub-tehranS01_space-other_T1w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-tehranS01/anat/sub-tehranS01_space-other_T1w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:48" + "Date": "2022-10-22 14:36:48", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-tehranS01/anat/sub-tehranS01_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-tehranS01/anat/sub-tehranS01_space-other_T2star_label-SC_softseg.json index cb1ada3a45..8d9d298753 100644 --- a/derivatives/labels_softseg/sub-tehranS01/anat/sub-tehranS01_space-other_T2star_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-tehranS01/anat/sub-tehranS01_space-other_T2star_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:48" + "Date": "2022-10-22 14:36:48", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-tehranS01/anat/sub-tehranS01_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-tehranS01/anat/sub-tehranS01_space-other_T2w_label-SC_softseg.json index cb1ada3a45..55f98278cf 100644 --- a/derivatives/labels_softseg/sub-tehranS01/anat/sub-tehranS01_space-other_T2w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-tehranS01/anat/sub-tehranS01_space-other_T2w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:48" + "Date": "2022-10-22 14:36:48", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-tehranS02/anat/sub-tehranS02_flip-1_mt-on_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-tehranS02/anat/sub-tehranS02_flip-1_mt-on_space-other_MTS_label-SC_softseg.json index cb1ada3a45..033c72efc0 100644 --- a/derivatives/labels_softseg/sub-tehranS02/anat/sub-tehranS02_flip-1_mt-on_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-tehranS02/anat/sub-tehranS02_flip-1_mt-on_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:48" + "Date": "2022-10-22 14:36:48", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-tehranS02/anat/sub-tehranS02_flip-2_mt-off_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-tehranS02/anat/sub-tehranS02_flip-2_mt-off_space-other_MTS_label-SC_softseg.json index cb1ada3a45..033c72efc0 100644 --- a/derivatives/labels_softseg/sub-tehranS02/anat/sub-tehranS02_flip-2_mt-off_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-tehranS02/anat/sub-tehranS02_flip-2_mt-off_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:48" + "Date": "2022-10-22 14:36:48", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-tehranS02/anat/sub-tehranS02_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-tehranS02/anat/sub-tehranS02_space-other_T1w_label-SC_softseg.json index cb1ada3a45..958f8cdb87 100644 --- a/derivatives/labels_softseg/sub-tehranS02/anat/sub-tehranS02_space-other_T1w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-tehranS02/anat/sub-tehranS02_space-other_T1w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:48" + "Date": "2022-10-22 14:36:48", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-tehranS02/anat/sub-tehranS02_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-tehranS02/anat/sub-tehranS02_space-other_T2star_label-SC_softseg.json index cb1ada3a45..8d9d298753 100644 --- a/derivatives/labels_softseg/sub-tehranS02/anat/sub-tehranS02_space-other_T2star_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-tehranS02/anat/sub-tehranS02_space-other_T2star_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:48" + "Date": "2022-10-22 14:36:48", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-tehranS02/anat/sub-tehranS02_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-tehranS02/anat/sub-tehranS02_space-other_T2w_label-SC_softseg.json index cb1ada3a45..55f98278cf 100644 --- a/derivatives/labels_softseg/sub-tehranS02/anat/sub-tehranS02_space-other_T2w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-tehranS02/anat/sub-tehranS02_space-other_T2w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:48" + "Date": "2022-10-22 14:36:48", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-tehranS03/anat/sub-tehranS03_flip-1_mt-on_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-tehranS03/anat/sub-tehranS03_flip-1_mt-on_space-other_MTS_label-SC_softseg.json index cb1ada3a45..033c72efc0 100644 --- a/derivatives/labels_softseg/sub-tehranS03/anat/sub-tehranS03_flip-1_mt-on_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-tehranS03/anat/sub-tehranS03_flip-1_mt-on_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:48" + "Date": "2022-10-22 14:36:48", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-tehranS03/anat/sub-tehranS03_flip-2_mt-off_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-tehranS03/anat/sub-tehranS03_flip-2_mt-off_space-other_MTS_label-SC_softseg.json index cb1ada3a45..033c72efc0 100644 --- a/derivatives/labels_softseg/sub-tehranS03/anat/sub-tehranS03_flip-2_mt-off_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-tehranS03/anat/sub-tehranS03_flip-2_mt-off_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:48" + "Date": "2022-10-22 14:36:48", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-tehranS03/anat/sub-tehranS03_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-tehranS03/anat/sub-tehranS03_space-other_T1w_label-SC_softseg.json index cb1ada3a45..958f8cdb87 100644 --- a/derivatives/labels_softseg/sub-tehranS03/anat/sub-tehranS03_space-other_T1w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-tehranS03/anat/sub-tehranS03_space-other_T1w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:48" + "Date": "2022-10-22 14:36:48", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-tehranS03/anat/sub-tehranS03_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-tehranS03/anat/sub-tehranS03_space-other_T2star_label-SC_softseg.json index cb1ada3a45..8d9d298753 100644 --- a/derivatives/labels_softseg/sub-tehranS03/anat/sub-tehranS03_space-other_T2star_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-tehranS03/anat/sub-tehranS03_space-other_T2star_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:48" + "Date": "2022-10-22 14:36:48", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-tehranS03/anat/sub-tehranS03_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-tehranS03/anat/sub-tehranS03_space-other_T2w_label-SC_softseg.json index cb1ada3a45..55f98278cf 100644 --- a/derivatives/labels_softseg/sub-tehranS03/anat/sub-tehranS03_space-other_T2w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-tehranS03/anat/sub-tehranS03_space-other_T2w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:48" + "Date": "2022-10-22 14:36:48", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-tehranS04/anat/sub-tehranS04_flip-1_mt-on_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-tehranS04/anat/sub-tehranS04_flip-1_mt-on_space-other_MTS_label-SC_softseg.json index cb1ada3a45..033c72efc0 100644 --- a/derivatives/labels_softseg/sub-tehranS04/anat/sub-tehranS04_flip-1_mt-on_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-tehranS04/anat/sub-tehranS04_flip-1_mt-on_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:48" + "Date": "2022-10-22 14:36:48", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-tehranS04/anat/sub-tehranS04_flip-2_mt-off_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-tehranS04/anat/sub-tehranS04_flip-2_mt-off_space-other_MTS_label-SC_softseg.json index cb1ada3a45..033c72efc0 100644 --- a/derivatives/labels_softseg/sub-tehranS04/anat/sub-tehranS04_flip-2_mt-off_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-tehranS04/anat/sub-tehranS04_flip-2_mt-off_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:48" + "Date": "2022-10-22 14:36:48", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-tehranS04/anat/sub-tehranS04_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-tehranS04/anat/sub-tehranS04_space-other_T1w_label-SC_softseg.json index cb1ada3a45..958f8cdb87 100644 --- a/derivatives/labels_softseg/sub-tehranS04/anat/sub-tehranS04_space-other_T1w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-tehranS04/anat/sub-tehranS04_space-other_T1w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:48" + "Date": "2022-10-22 14:36:48", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-tehranS04/anat/sub-tehranS04_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-tehranS04/anat/sub-tehranS04_space-other_T2star_label-SC_softseg.json index cb1ada3a45..8d9d298753 100644 --- a/derivatives/labels_softseg/sub-tehranS04/anat/sub-tehranS04_space-other_T2star_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-tehranS04/anat/sub-tehranS04_space-other_T2star_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:48" + "Date": "2022-10-22 14:36:48", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-tehranS04/anat/sub-tehranS04_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-tehranS04/anat/sub-tehranS04_space-other_T2w_label-SC_softseg.json index cb1ada3a45..55f98278cf 100644 --- a/derivatives/labels_softseg/sub-tehranS04/anat/sub-tehranS04_space-other_T2w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-tehranS04/anat/sub-tehranS04_space-other_T2w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:48" + "Date": "2022-10-22 14:36:48", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-tehranS05/anat/sub-tehranS05_flip-1_mt-on_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-tehranS05/anat/sub-tehranS05_flip-1_mt-on_space-other_MTS_label-SC_softseg.json index e41d6ca48c..f7ba143b31 100644 --- a/derivatives/labels_softseg/sub-tehranS05/anat/sub-tehranS05_flip-1_mt-on_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-tehranS05/anat/sub-tehranS05_flip-1_mt-on_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:49" + "Date": "2022-10-22 14:36:49", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-tehranS05/anat/sub-tehranS05_flip-2_mt-off_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-tehranS05/anat/sub-tehranS05_flip-2_mt-off_space-other_MTS_label-SC_softseg.json index e41d6ca48c..f7ba143b31 100644 --- a/derivatives/labels_softseg/sub-tehranS05/anat/sub-tehranS05_flip-2_mt-off_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-tehranS05/anat/sub-tehranS05_flip-2_mt-off_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:49" + "Date": "2022-10-22 14:36:49", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-tehranS05/anat/sub-tehranS05_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-tehranS05/anat/sub-tehranS05_space-other_T1w_label-SC_softseg.json index e41d6ca48c..2cac173070 100644 --- a/derivatives/labels_softseg/sub-tehranS05/anat/sub-tehranS05_space-other_T1w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-tehranS05/anat/sub-tehranS05_space-other_T1w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:49" + "Date": "2022-10-22 14:36:49", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-tehranS05/anat/sub-tehranS05_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-tehranS05/anat/sub-tehranS05_space-other_T2star_label-SC_softseg.json index e41d6ca48c..9f0eafa81c 100644 --- a/derivatives/labels_softseg/sub-tehranS05/anat/sub-tehranS05_space-other_T2star_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-tehranS05/anat/sub-tehranS05_space-other_T2star_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:49" + "Date": "2022-10-22 14:36:49", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-tehranS05/anat/sub-tehranS05_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-tehranS05/anat/sub-tehranS05_space-other_T2w_label-SC_softseg.json index e41d6ca48c..285d95dae4 100644 --- a/derivatives/labels_softseg/sub-tehranS05/anat/sub-tehranS05_space-other_T2w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-tehranS05/anat/sub-tehranS05_space-other_T2w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:49" + "Date": "2022-10-22 14:36:49", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-tehranS06/anat/sub-tehranS06_flip-1_mt-on_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-tehranS06/anat/sub-tehranS06_flip-1_mt-on_space-other_MTS_label-SC_softseg.json index e41d6ca48c..f7ba143b31 100644 --- a/derivatives/labels_softseg/sub-tehranS06/anat/sub-tehranS06_flip-1_mt-on_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-tehranS06/anat/sub-tehranS06_flip-1_mt-on_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:49" + "Date": "2022-10-22 14:36:49", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-tehranS06/anat/sub-tehranS06_flip-2_mt-off_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-tehranS06/anat/sub-tehranS06_flip-2_mt-off_space-other_MTS_label-SC_softseg.json index e41d6ca48c..f7ba143b31 100644 --- a/derivatives/labels_softseg/sub-tehranS06/anat/sub-tehranS06_flip-2_mt-off_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-tehranS06/anat/sub-tehranS06_flip-2_mt-off_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:49" + "Date": "2022-10-22 14:36:49", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-tehranS06/anat/sub-tehranS06_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-tehranS06/anat/sub-tehranS06_space-other_T1w_label-SC_softseg.json index e41d6ca48c..2cac173070 100644 --- a/derivatives/labels_softseg/sub-tehranS06/anat/sub-tehranS06_space-other_T1w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-tehranS06/anat/sub-tehranS06_space-other_T1w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:49" + "Date": "2022-10-22 14:36:49", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-tehranS06/anat/sub-tehranS06_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-tehranS06/anat/sub-tehranS06_space-other_T2star_label-SC_softseg.json index e41d6ca48c..9f0eafa81c 100644 --- a/derivatives/labels_softseg/sub-tehranS06/anat/sub-tehranS06_space-other_T2star_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-tehranS06/anat/sub-tehranS06_space-other_T2star_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:49" + "Date": "2022-10-22 14:36:49", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-tehranS06/anat/sub-tehranS06_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-tehranS06/anat/sub-tehranS06_space-other_T2w_label-SC_softseg.json index e41d6ca48c..285d95dae4 100644 --- a/derivatives/labels_softseg/sub-tehranS06/anat/sub-tehranS06_space-other_T2w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-tehranS06/anat/sub-tehranS06_space-other_T2w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:49" + "Date": "2022-10-22 14:36:49", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-tokyo750w01/anat/sub-tokyo750w01_flip-1_mt-on_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-tokyo750w01/anat/sub-tokyo750w01_flip-1_mt-on_space-other_MTS_label-SC_softseg.json index e41d6ca48c..f7ba143b31 100644 --- a/derivatives/labels_softseg/sub-tokyo750w01/anat/sub-tokyo750w01_flip-1_mt-on_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-tokyo750w01/anat/sub-tokyo750w01_flip-1_mt-on_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:49" + "Date": "2022-10-22 14:36:49", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-tokyo750w01/anat/sub-tokyo750w01_flip-2_mt-off_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-tokyo750w01/anat/sub-tokyo750w01_flip-2_mt-off_space-other_MTS_label-SC_softseg.json index e41d6ca48c..f7ba143b31 100644 --- a/derivatives/labels_softseg/sub-tokyo750w01/anat/sub-tokyo750w01_flip-2_mt-off_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-tokyo750w01/anat/sub-tokyo750w01_flip-2_mt-off_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:49" + "Date": "2022-10-22 14:36:49", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-tokyo750w01/anat/sub-tokyo750w01_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-tokyo750w01/anat/sub-tokyo750w01_space-other_T1w_label-SC_softseg.json index e41d6ca48c..2cac173070 100644 --- a/derivatives/labels_softseg/sub-tokyo750w01/anat/sub-tokyo750w01_space-other_T1w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-tokyo750w01/anat/sub-tokyo750w01_space-other_T1w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:49" + "Date": "2022-10-22 14:36:49", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-tokyo750w01/anat/sub-tokyo750w01_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-tokyo750w01/anat/sub-tokyo750w01_space-other_T2star_label-SC_softseg.json index e41d6ca48c..9f0eafa81c 100644 --- a/derivatives/labels_softseg/sub-tokyo750w01/anat/sub-tokyo750w01_space-other_T2star_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-tokyo750w01/anat/sub-tokyo750w01_space-other_T2star_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:49" + "Date": "2022-10-22 14:36:49", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-tokyo750w01/anat/sub-tokyo750w01_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-tokyo750w01/anat/sub-tokyo750w01_space-other_T2w_label-SC_softseg.json index e41d6ca48c..285d95dae4 100644 --- a/derivatives/labels_softseg/sub-tokyo750w01/anat/sub-tokyo750w01_space-other_T2w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-tokyo750w01/anat/sub-tokyo750w01_space-other_T2w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:49" + "Date": "2022-10-22 14:36:49", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-tokyo750w02/anat/sub-tokyo750w02_flip-1_mt-on_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-tokyo750w02/anat/sub-tokyo750w02_flip-1_mt-on_space-other_MTS_label-SC_softseg.json index e41d6ca48c..f7ba143b31 100644 --- a/derivatives/labels_softseg/sub-tokyo750w02/anat/sub-tokyo750w02_flip-1_mt-on_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-tokyo750w02/anat/sub-tokyo750w02_flip-1_mt-on_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:49" + "Date": "2022-10-22 14:36:49", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-tokyo750w02/anat/sub-tokyo750w02_flip-2_mt-off_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-tokyo750w02/anat/sub-tokyo750w02_flip-2_mt-off_space-other_MTS_label-SC_softseg.json index e41d6ca48c..f7ba143b31 100644 --- a/derivatives/labels_softseg/sub-tokyo750w02/anat/sub-tokyo750w02_flip-2_mt-off_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-tokyo750w02/anat/sub-tokyo750w02_flip-2_mt-off_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:49" + "Date": "2022-10-22 14:36:49", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-tokyo750w02/anat/sub-tokyo750w02_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-tokyo750w02/anat/sub-tokyo750w02_space-other_T1w_label-SC_softseg.json index e41d6ca48c..2cac173070 100644 --- a/derivatives/labels_softseg/sub-tokyo750w02/anat/sub-tokyo750w02_space-other_T1w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-tokyo750w02/anat/sub-tokyo750w02_space-other_T1w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:49" + "Date": "2022-10-22 14:36:49", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-tokyo750w02/anat/sub-tokyo750w02_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-tokyo750w02/anat/sub-tokyo750w02_space-other_T2star_label-SC_softseg.json index e41d6ca48c..9f0eafa81c 100644 --- a/derivatives/labels_softseg/sub-tokyo750w02/anat/sub-tokyo750w02_space-other_T2star_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-tokyo750w02/anat/sub-tokyo750w02_space-other_T2star_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:49" + "Date": "2022-10-22 14:36:49", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-tokyo750w02/anat/sub-tokyo750w02_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-tokyo750w02/anat/sub-tokyo750w02_space-other_T2w_label-SC_softseg.json index e41d6ca48c..285d95dae4 100644 --- a/derivatives/labels_softseg/sub-tokyo750w02/anat/sub-tokyo750w02_space-other_T2w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-tokyo750w02/anat/sub-tokyo750w02_space-other_T2w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:49" + "Date": "2022-10-22 14:36:49", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-tokyo750w03/anat/sub-tokyo750w03_flip-1_mt-on_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-tokyo750w03/anat/sub-tokyo750w03_flip-1_mt-on_space-other_MTS_label-SC_softseg.json index bf02a0dd72..0efb6e8a6b 100644 --- a/derivatives/labels_softseg/sub-tokyo750w03/anat/sub-tokyo750w03_flip-1_mt-on_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-tokyo750w03/anat/sub-tokyo750w03_flip-1_mt-on_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:50" + "Date": "2022-10-22 14:36:50", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-tokyo750w03/anat/sub-tokyo750w03_flip-2_mt-off_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-tokyo750w03/anat/sub-tokyo750w03_flip-2_mt-off_space-other_MTS_label-SC_softseg.json index bf02a0dd72..0efb6e8a6b 100644 --- a/derivatives/labels_softseg/sub-tokyo750w03/anat/sub-tokyo750w03_flip-2_mt-off_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-tokyo750w03/anat/sub-tokyo750w03_flip-2_mt-off_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:50" + "Date": "2022-10-22 14:36:50", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-tokyo750w03/anat/sub-tokyo750w03_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-tokyo750w03/anat/sub-tokyo750w03_space-other_T1w_label-SC_softseg.json index bf02a0dd72..54129a95b3 100644 --- a/derivatives/labels_softseg/sub-tokyo750w03/anat/sub-tokyo750w03_space-other_T1w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-tokyo750w03/anat/sub-tokyo750w03_space-other_T1w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:50" + "Date": "2022-10-22 14:36:50", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-tokyo750w03/anat/sub-tokyo750w03_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-tokyo750w03/anat/sub-tokyo750w03_space-other_T2star_label-SC_softseg.json index bf02a0dd72..602d9bb4a2 100644 --- a/derivatives/labels_softseg/sub-tokyo750w03/anat/sub-tokyo750w03_space-other_T2star_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-tokyo750w03/anat/sub-tokyo750w03_space-other_T2star_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:50" + "Date": "2022-10-22 14:36:50", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-tokyo750w03/anat/sub-tokyo750w03_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-tokyo750w03/anat/sub-tokyo750w03_space-other_T2w_label-SC_softseg.json index bf02a0dd72..e78a264c2d 100644 --- a/derivatives/labels_softseg/sub-tokyo750w03/anat/sub-tokyo750w03_space-other_T2w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-tokyo750w03/anat/sub-tokyo750w03_space-other_T2w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:50" + "Date": "2022-10-22 14:36:50", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-tokyo750w04/anat/sub-tokyo750w04_flip-1_mt-on_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-tokyo750w04/anat/sub-tokyo750w04_flip-1_mt-on_space-other_MTS_label-SC_softseg.json index bf02a0dd72..0efb6e8a6b 100644 --- a/derivatives/labels_softseg/sub-tokyo750w04/anat/sub-tokyo750w04_flip-1_mt-on_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-tokyo750w04/anat/sub-tokyo750w04_flip-1_mt-on_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:50" + "Date": "2022-10-22 14:36:50", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-tokyo750w04/anat/sub-tokyo750w04_flip-2_mt-off_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-tokyo750w04/anat/sub-tokyo750w04_flip-2_mt-off_space-other_MTS_label-SC_softseg.json index bf02a0dd72..0efb6e8a6b 100644 --- a/derivatives/labels_softseg/sub-tokyo750w04/anat/sub-tokyo750w04_flip-2_mt-off_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-tokyo750w04/anat/sub-tokyo750w04_flip-2_mt-off_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:50" + "Date": "2022-10-22 14:36:50", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-tokyo750w04/anat/sub-tokyo750w04_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-tokyo750w04/anat/sub-tokyo750w04_space-other_T1w_label-SC_softseg.json index bf02a0dd72..54129a95b3 100644 --- a/derivatives/labels_softseg/sub-tokyo750w04/anat/sub-tokyo750w04_space-other_T1w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-tokyo750w04/anat/sub-tokyo750w04_space-other_T1w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:50" + "Date": "2022-10-22 14:36:50", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-tokyo750w04/anat/sub-tokyo750w04_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-tokyo750w04/anat/sub-tokyo750w04_space-other_T2star_label-SC_softseg.json index bf02a0dd72..602d9bb4a2 100644 --- a/derivatives/labels_softseg/sub-tokyo750w04/anat/sub-tokyo750w04_space-other_T2star_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-tokyo750w04/anat/sub-tokyo750w04_space-other_T2star_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:50" + "Date": "2022-10-22 14:36:50", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-tokyo750w04/anat/sub-tokyo750w04_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-tokyo750w04/anat/sub-tokyo750w04_space-other_T2w_label-SC_softseg.json index bf02a0dd72..e78a264c2d 100644 --- a/derivatives/labels_softseg/sub-tokyo750w04/anat/sub-tokyo750w04_space-other_T2w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-tokyo750w04/anat/sub-tokyo750w04_space-other_T2w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:50" + "Date": "2022-10-22 14:36:50", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-tokyo750w05/anat/sub-tokyo750w05_flip-1_mt-on_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-tokyo750w05/anat/sub-tokyo750w05_flip-1_mt-on_space-other_MTS_label-SC_softseg.json index bf02a0dd72..0efb6e8a6b 100644 --- a/derivatives/labels_softseg/sub-tokyo750w05/anat/sub-tokyo750w05_flip-1_mt-on_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-tokyo750w05/anat/sub-tokyo750w05_flip-1_mt-on_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:50" + "Date": "2022-10-22 14:36:50", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-tokyo750w05/anat/sub-tokyo750w05_flip-2_mt-off_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-tokyo750w05/anat/sub-tokyo750w05_flip-2_mt-off_space-other_MTS_label-SC_softseg.json index bf02a0dd72..0efb6e8a6b 100644 --- a/derivatives/labels_softseg/sub-tokyo750w05/anat/sub-tokyo750w05_flip-2_mt-off_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-tokyo750w05/anat/sub-tokyo750w05_flip-2_mt-off_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:50" + "Date": "2022-10-22 14:36:50", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-tokyo750w05/anat/sub-tokyo750w05_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-tokyo750w05/anat/sub-tokyo750w05_space-other_T1w_label-SC_softseg.json index bf02a0dd72..54129a95b3 100644 --- a/derivatives/labels_softseg/sub-tokyo750w05/anat/sub-tokyo750w05_space-other_T1w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-tokyo750w05/anat/sub-tokyo750w05_space-other_T1w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:50" + "Date": "2022-10-22 14:36:50", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-tokyo750w05/anat/sub-tokyo750w05_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-tokyo750w05/anat/sub-tokyo750w05_space-other_T2star_label-SC_softseg.json index bf02a0dd72..602d9bb4a2 100644 --- a/derivatives/labels_softseg/sub-tokyo750w05/anat/sub-tokyo750w05_space-other_T2star_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-tokyo750w05/anat/sub-tokyo750w05_space-other_T2star_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:50" + "Date": "2022-10-22 14:36:50", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-tokyo750w05/anat/sub-tokyo750w05_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-tokyo750w05/anat/sub-tokyo750w05_space-other_T2w_label-SC_softseg.json index bf02a0dd72..e78a264c2d 100644 --- a/derivatives/labels_softseg/sub-tokyo750w05/anat/sub-tokyo750w05_space-other_T2w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-tokyo750w05/anat/sub-tokyo750w05_space-other_T2w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:50" + "Date": "2022-10-22 14:36:50", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-tokyo750w06/anat/sub-tokyo750w06_flip-1_mt-on_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-tokyo750w06/anat/sub-tokyo750w06_flip-1_mt-on_space-other_MTS_label-SC_softseg.json index bf02a0dd72..0efb6e8a6b 100644 --- a/derivatives/labels_softseg/sub-tokyo750w06/anat/sub-tokyo750w06_flip-1_mt-on_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-tokyo750w06/anat/sub-tokyo750w06_flip-1_mt-on_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:50" + "Date": "2022-10-22 14:36:50", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-tokyo750w06/anat/sub-tokyo750w06_flip-2_mt-off_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-tokyo750w06/anat/sub-tokyo750w06_flip-2_mt-off_space-other_MTS_label-SC_softseg.json index bf02a0dd72..0efb6e8a6b 100644 --- a/derivatives/labels_softseg/sub-tokyo750w06/anat/sub-tokyo750w06_flip-2_mt-off_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-tokyo750w06/anat/sub-tokyo750w06_flip-2_mt-off_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:50" + "Date": "2022-10-22 14:36:50", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-tokyo750w06/anat/sub-tokyo750w06_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-tokyo750w06/anat/sub-tokyo750w06_space-other_T1w_label-SC_softseg.json index bf02a0dd72..54129a95b3 100644 --- a/derivatives/labels_softseg/sub-tokyo750w06/anat/sub-tokyo750w06_space-other_T1w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-tokyo750w06/anat/sub-tokyo750w06_space-other_T1w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:50" + "Date": "2022-10-22 14:36:50", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-tokyo750w06/anat/sub-tokyo750w06_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-tokyo750w06/anat/sub-tokyo750w06_space-other_T2star_label-SC_softseg.json index bf02a0dd72..602d9bb4a2 100644 --- a/derivatives/labels_softseg/sub-tokyo750w06/anat/sub-tokyo750w06_space-other_T2star_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-tokyo750w06/anat/sub-tokyo750w06_space-other_T2star_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:50" + "Date": "2022-10-22 14:36:50", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-tokyo750w06/anat/sub-tokyo750w06_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-tokyo750w06/anat/sub-tokyo750w06_space-other_T2w_label-SC_softseg.json index bf02a0dd72..e78a264c2d 100644 --- a/derivatives/labels_softseg/sub-tokyo750w06/anat/sub-tokyo750w06_space-other_T2w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-tokyo750w06/anat/sub-tokyo750w06_space-other_T2w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:50" + "Date": "2022-10-22 14:36:50", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-tokyo750w07/anat/sub-tokyo750w07_flip-1_mt-on_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-tokyo750w07/anat/sub-tokyo750w07_flip-1_mt-on_space-other_MTS_label-SC_softseg.json index e6b3b129d6..3b55b7d18b 100644 --- a/derivatives/labels_softseg/sub-tokyo750w07/anat/sub-tokyo750w07_flip-1_mt-on_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-tokyo750w07/anat/sub-tokyo750w07_flip-1_mt-on_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:51" + "Date": "2022-10-22 14:36:51", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-tokyo750w07/anat/sub-tokyo750w07_flip-2_mt-off_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-tokyo750w07/anat/sub-tokyo750w07_flip-2_mt-off_space-other_MTS_label-SC_softseg.json index e6b3b129d6..3b55b7d18b 100644 --- a/derivatives/labels_softseg/sub-tokyo750w07/anat/sub-tokyo750w07_flip-2_mt-off_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-tokyo750w07/anat/sub-tokyo750w07_flip-2_mt-off_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:51" + "Date": "2022-10-22 14:36:51", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-tokyo750w07/anat/sub-tokyo750w07_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-tokyo750w07/anat/sub-tokyo750w07_space-other_T1w_label-SC_softseg.json index e6b3b129d6..6bdc0d9940 100644 --- a/derivatives/labels_softseg/sub-tokyo750w07/anat/sub-tokyo750w07_space-other_T1w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-tokyo750w07/anat/sub-tokyo750w07_space-other_T1w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:51" + "Date": "2022-10-22 14:36:51", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-tokyo750w07/anat/sub-tokyo750w07_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-tokyo750w07/anat/sub-tokyo750w07_space-other_T2star_label-SC_softseg.json index e6b3b129d6..d636a1474c 100644 --- a/derivatives/labels_softseg/sub-tokyo750w07/anat/sub-tokyo750w07_space-other_T2star_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-tokyo750w07/anat/sub-tokyo750w07_space-other_T2star_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:51" + "Date": "2022-10-22 14:36:51", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-tokyo750w07/anat/sub-tokyo750w07_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-tokyo750w07/anat/sub-tokyo750w07_space-other_T2w_label-SC_softseg.json index e6b3b129d6..6460bdaaec 100644 --- a/derivatives/labels_softseg/sub-tokyo750w07/anat/sub-tokyo750w07_space-other_T2w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-tokyo750w07/anat/sub-tokyo750w07_space-other_T2w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:51" + "Date": "2022-10-22 14:36:51", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-tokyoIngenia01/anat/sub-tokyoIngenia01_flip-1_mt-on_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-tokyoIngenia01/anat/sub-tokyoIngenia01_flip-1_mt-on_space-other_MTS_label-SC_softseg.json index e6b3b129d6..3b55b7d18b 100644 --- a/derivatives/labels_softseg/sub-tokyoIngenia01/anat/sub-tokyoIngenia01_flip-1_mt-on_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-tokyoIngenia01/anat/sub-tokyoIngenia01_flip-1_mt-on_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:51" + "Date": "2022-10-22 14:36:51", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-tokyoIngenia01/anat/sub-tokyoIngenia01_flip-2_mt-off_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-tokyoIngenia01/anat/sub-tokyoIngenia01_flip-2_mt-off_space-other_MTS_label-SC_softseg.json index e6b3b129d6..3b55b7d18b 100644 --- a/derivatives/labels_softseg/sub-tokyoIngenia01/anat/sub-tokyoIngenia01_flip-2_mt-off_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-tokyoIngenia01/anat/sub-tokyoIngenia01_flip-2_mt-off_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:51" + "Date": "2022-10-22 14:36:51", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-tokyoIngenia01/anat/sub-tokyoIngenia01_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-tokyoIngenia01/anat/sub-tokyoIngenia01_space-other_T1w_label-SC_softseg.json index e6b3b129d6..6bdc0d9940 100644 --- a/derivatives/labels_softseg/sub-tokyoIngenia01/anat/sub-tokyoIngenia01_space-other_T1w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-tokyoIngenia01/anat/sub-tokyoIngenia01_space-other_T1w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:51" + "Date": "2022-10-22 14:36:51", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-tokyoIngenia01/anat/sub-tokyoIngenia01_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-tokyoIngenia01/anat/sub-tokyoIngenia01_space-other_T2star_label-SC_softseg.json index e6b3b129d6..d636a1474c 100644 --- a/derivatives/labels_softseg/sub-tokyoIngenia01/anat/sub-tokyoIngenia01_space-other_T2star_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-tokyoIngenia01/anat/sub-tokyoIngenia01_space-other_T2star_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:51" + "Date": "2022-10-22 14:36:51", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-tokyoIngenia01/anat/sub-tokyoIngenia01_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-tokyoIngenia01/anat/sub-tokyoIngenia01_space-other_T2w_label-SC_softseg.json index e6b3b129d6..6460bdaaec 100644 --- a/derivatives/labels_softseg/sub-tokyoIngenia01/anat/sub-tokyoIngenia01_space-other_T2w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-tokyoIngenia01/anat/sub-tokyoIngenia01_space-other_T2w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:51" + "Date": "2022-10-22 14:36:51", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-tokyoIngenia02/anat/sub-tokyoIngenia02_flip-1_mt-on_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-tokyoIngenia02/anat/sub-tokyoIngenia02_flip-1_mt-on_space-other_MTS_label-SC_softseg.json index e6b3b129d6..3b55b7d18b 100644 --- a/derivatives/labels_softseg/sub-tokyoIngenia02/anat/sub-tokyoIngenia02_flip-1_mt-on_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-tokyoIngenia02/anat/sub-tokyoIngenia02_flip-1_mt-on_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:51" + "Date": "2022-10-22 14:36:51", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-tokyoIngenia02/anat/sub-tokyoIngenia02_flip-2_mt-off_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-tokyoIngenia02/anat/sub-tokyoIngenia02_flip-2_mt-off_space-other_MTS_label-SC_softseg.json index e6b3b129d6..3b55b7d18b 100644 --- a/derivatives/labels_softseg/sub-tokyoIngenia02/anat/sub-tokyoIngenia02_flip-2_mt-off_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-tokyoIngenia02/anat/sub-tokyoIngenia02_flip-2_mt-off_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:51" + "Date": "2022-10-22 14:36:51", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-tokyoIngenia02/anat/sub-tokyoIngenia02_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-tokyoIngenia02/anat/sub-tokyoIngenia02_space-other_T1w_label-SC_softseg.json index e6b3b129d6..6bdc0d9940 100644 --- a/derivatives/labels_softseg/sub-tokyoIngenia02/anat/sub-tokyoIngenia02_space-other_T1w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-tokyoIngenia02/anat/sub-tokyoIngenia02_space-other_T1w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:51" + "Date": "2022-10-22 14:36:51", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-tokyoIngenia02/anat/sub-tokyoIngenia02_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-tokyoIngenia02/anat/sub-tokyoIngenia02_space-other_T2star_label-SC_softseg.json index e6b3b129d6..d636a1474c 100644 --- a/derivatives/labels_softseg/sub-tokyoIngenia02/anat/sub-tokyoIngenia02_space-other_T2star_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-tokyoIngenia02/anat/sub-tokyoIngenia02_space-other_T2star_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:51" + "Date": "2022-10-22 14:36:51", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-tokyoIngenia02/anat/sub-tokyoIngenia02_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-tokyoIngenia02/anat/sub-tokyoIngenia02_space-other_T2w_label-SC_softseg.json index e6b3b129d6..6460bdaaec 100644 --- a/derivatives/labels_softseg/sub-tokyoIngenia02/anat/sub-tokyoIngenia02_space-other_T2w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-tokyoIngenia02/anat/sub-tokyoIngenia02_space-other_T2w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:51" + "Date": "2022-10-22 14:36:51", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-tokyoIngenia03/anat/sub-tokyoIngenia03_flip-1_mt-on_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-tokyoIngenia03/anat/sub-tokyoIngenia03_flip-1_mt-on_space-other_MTS_label-SC_softseg.json index e6b3b129d6..3b55b7d18b 100644 --- a/derivatives/labels_softseg/sub-tokyoIngenia03/anat/sub-tokyoIngenia03_flip-1_mt-on_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-tokyoIngenia03/anat/sub-tokyoIngenia03_flip-1_mt-on_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:51" + "Date": "2022-10-22 14:36:51", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-tokyoIngenia03/anat/sub-tokyoIngenia03_flip-2_mt-off_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-tokyoIngenia03/anat/sub-tokyoIngenia03_flip-2_mt-off_space-other_MTS_label-SC_softseg.json index e6b3b129d6..3b55b7d18b 100644 --- a/derivatives/labels_softseg/sub-tokyoIngenia03/anat/sub-tokyoIngenia03_flip-2_mt-off_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-tokyoIngenia03/anat/sub-tokyoIngenia03_flip-2_mt-off_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:51" + "Date": "2022-10-22 14:36:51", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-tokyoIngenia03/anat/sub-tokyoIngenia03_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-tokyoIngenia03/anat/sub-tokyoIngenia03_space-other_T1w_label-SC_softseg.json index e6b3b129d6..6bdc0d9940 100644 --- a/derivatives/labels_softseg/sub-tokyoIngenia03/anat/sub-tokyoIngenia03_space-other_T1w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-tokyoIngenia03/anat/sub-tokyoIngenia03_space-other_T1w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:51" + "Date": "2022-10-22 14:36:51", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-tokyoIngenia03/anat/sub-tokyoIngenia03_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-tokyoIngenia03/anat/sub-tokyoIngenia03_space-other_T2star_label-SC_softseg.json index e6b3b129d6..d636a1474c 100644 --- a/derivatives/labels_softseg/sub-tokyoIngenia03/anat/sub-tokyoIngenia03_space-other_T2star_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-tokyoIngenia03/anat/sub-tokyoIngenia03_space-other_T2star_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:51" + "Date": "2022-10-22 14:36:51", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-tokyoIngenia03/anat/sub-tokyoIngenia03_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-tokyoIngenia03/anat/sub-tokyoIngenia03_space-other_T2w_label-SC_softseg.json index dedf7bd0ad..8b7354713a 100644 --- a/derivatives/labels_softseg/sub-tokyoIngenia03/anat/sub-tokyoIngenia03_space-other_T2w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-tokyoIngenia03/anat/sub-tokyoIngenia03_space-other_T2w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:52" + "Date": "2022-10-22 14:36:52", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-tokyoIngenia04/anat/sub-tokyoIngenia04_flip-1_mt-on_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-tokyoIngenia04/anat/sub-tokyoIngenia04_flip-1_mt-on_space-other_MTS_label-SC_softseg.json index dedf7bd0ad..48489dce3d 100644 --- a/derivatives/labels_softseg/sub-tokyoIngenia04/anat/sub-tokyoIngenia04_flip-1_mt-on_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-tokyoIngenia04/anat/sub-tokyoIngenia04_flip-1_mt-on_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:52" + "Date": "2022-10-22 14:36:52", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-tokyoIngenia04/anat/sub-tokyoIngenia04_flip-2_mt-off_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-tokyoIngenia04/anat/sub-tokyoIngenia04_flip-2_mt-off_space-other_MTS_label-SC_softseg.json index dedf7bd0ad..48489dce3d 100644 --- a/derivatives/labels_softseg/sub-tokyoIngenia04/anat/sub-tokyoIngenia04_flip-2_mt-off_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-tokyoIngenia04/anat/sub-tokyoIngenia04_flip-2_mt-off_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:52" + "Date": "2022-10-22 14:36:52", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-tokyoIngenia04/anat/sub-tokyoIngenia04_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-tokyoIngenia04/anat/sub-tokyoIngenia04_space-other_T1w_label-SC_softseg.json index dedf7bd0ad..67f6f58f3b 100644 --- a/derivatives/labels_softseg/sub-tokyoIngenia04/anat/sub-tokyoIngenia04_space-other_T1w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-tokyoIngenia04/anat/sub-tokyoIngenia04_space-other_T1w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:52" + "Date": "2022-10-22 14:36:52", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-tokyoIngenia04/anat/sub-tokyoIngenia04_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-tokyoIngenia04/anat/sub-tokyoIngenia04_space-other_T2star_label-SC_softseg.json index dedf7bd0ad..b745d8b1eb 100644 --- a/derivatives/labels_softseg/sub-tokyoIngenia04/anat/sub-tokyoIngenia04_space-other_T2star_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-tokyoIngenia04/anat/sub-tokyoIngenia04_space-other_T2star_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:52" + "Date": "2022-10-22 14:36:52", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-tokyoIngenia04/anat/sub-tokyoIngenia04_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-tokyoIngenia04/anat/sub-tokyoIngenia04_space-other_T2w_label-SC_softseg.json index dedf7bd0ad..8b7354713a 100644 --- a/derivatives/labels_softseg/sub-tokyoIngenia04/anat/sub-tokyoIngenia04_space-other_T2w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-tokyoIngenia04/anat/sub-tokyoIngenia04_space-other_T2w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:52" + "Date": "2022-10-22 14:36:52", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-tokyoIngenia05/anat/sub-tokyoIngenia05_flip-1_mt-on_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-tokyoIngenia05/anat/sub-tokyoIngenia05_flip-1_mt-on_space-other_MTS_label-SC_softseg.json index dedf7bd0ad..48489dce3d 100644 --- a/derivatives/labels_softseg/sub-tokyoIngenia05/anat/sub-tokyoIngenia05_flip-1_mt-on_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-tokyoIngenia05/anat/sub-tokyoIngenia05_flip-1_mt-on_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:52" + "Date": "2022-10-22 14:36:52", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-tokyoIngenia05/anat/sub-tokyoIngenia05_flip-2_mt-off_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-tokyoIngenia05/anat/sub-tokyoIngenia05_flip-2_mt-off_space-other_MTS_label-SC_softseg.json index dedf7bd0ad..48489dce3d 100644 --- a/derivatives/labels_softseg/sub-tokyoIngenia05/anat/sub-tokyoIngenia05_flip-2_mt-off_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-tokyoIngenia05/anat/sub-tokyoIngenia05_flip-2_mt-off_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:52" + "Date": "2022-10-22 14:36:52", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-tokyoIngenia05/anat/sub-tokyoIngenia05_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-tokyoIngenia05/anat/sub-tokyoIngenia05_space-other_T1w_label-SC_softseg.json index dedf7bd0ad..67f6f58f3b 100644 --- a/derivatives/labels_softseg/sub-tokyoIngenia05/anat/sub-tokyoIngenia05_space-other_T1w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-tokyoIngenia05/anat/sub-tokyoIngenia05_space-other_T1w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:52" + "Date": "2022-10-22 14:36:52", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-tokyoIngenia05/anat/sub-tokyoIngenia05_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-tokyoIngenia05/anat/sub-tokyoIngenia05_space-other_T2star_label-SC_softseg.json index dedf7bd0ad..b745d8b1eb 100644 --- a/derivatives/labels_softseg/sub-tokyoIngenia05/anat/sub-tokyoIngenia05_space-other_T2star_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-tokyoIngenia05/anat/sub-tokyoIngenia05_space-other_T2star_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:52" + "Date": "2022-10-22 14:36:52", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-tokyoIngenia05/anat/sub-tokyoIngenia05_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-tokyoIngenia05/anat/sub-tokyoIngenia05_space-other_T2w_label-SC_softseg.json index dedf7bd0ad..8b7354713a 100644 --- a/derivatives/labels_softseg/sub-tokyoIngenia05/anat/sub-tokyoIngenia05_space-other_T2w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-tokyoIngenia05/anat/sub-tokyoIngenia05_space-other_T2w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:52" + "Date": "2022-10-22 14:36:52", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-tokyoIngenia06/anat/sub-tokyoIngenia06_flip-1_mt-on_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-tokyoIngenia06/anat/sub-tokyoIngenia06_flip-1_mt-on_space-other_MTS_label-SC_softseg.json index dedf7bd0ad..48489dce3d 100644 --- a/derivatives/labels_softseg/sub-tokyoIngenia06/anat/sub-tokyoIngenia06_flip-1_mt-on_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-tokyoIngenia06/anat/sub-tokyoIngenia06_flip-1_mt-on_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:52" + "Date": "2022-10-22 14:36:52", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-tokyoIngenia06/anat/sub-tokyoIngenia06_flip-2_mt-off_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-tokyoIngenia06/anat/sub-tokyoIngenia06_flip-2_mt-off_space-other_MTS_label-SC_softseg.json index dedf7bd0ad..48489dce3d 100644 --- a/derivatives/labels_softseg/sub-tokyoIngenia06/anat/sub-tokyoIngenia06_flip-2_mt-off_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-tokyoIngenia06/anat/sub-tokyoIngenia06_flip-2_mt-off_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:52" + "Date": "2022-10-22 14:36:52", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-tokyoIngenia06/anat/sub-tokyoIngenia06_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-tokyoIngenia06/anat/sub-tokyoIngenia06_space-other_T1w_label-SC_softseg.json index dedf7bd0ad..67f6f58f3b 100644 --- a/derivatives/labels_softseg/sub-tokyoIngenia06/anat/sub-tokyoIngenia06_space-other_T1w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-tokyoIngenia06/anat/sub-tokyoIngenia06_space-other_T1w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:52" + "Date": "2022-10-22 14:36:52", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-tokyoIngenia06/anat/sub-tokyoIngenia06_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-tokyoIngenia06/anat/sub-tokyoIngenia06_space-other_T2star_label-SC_softseg.json index dedf7bd0ad..b745d8b1eb 100644 --- a/derivatives/labels_softseg/sub-tokyoIngenia06/anat/sub-tokyoIngenia06_space-other_T2star_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-tokyoIngenia06/anat/sub-tokyoIngenia06_space-other_T2star_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:52" + "Date": "2022-10-22 14:36:52", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-tokyoIngenia06/anat/sub-tokyoIngenia06_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-tokyoIngenia06/anat/sub-tokyoIngenia06_space-other_T2w_label-SC_softseg.json index dedf7bd0ad..8b7354713a 100644 --- a/derivatives/labels_softseg/sub-tokyoIngenia06/anat/sub-tokyoIngenia06_space-other_T2w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-tokyoIngenia06/anat/sub-tokyoIngenia06_space-other_T2w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:52" + "Date": "2022-10-22 14:36:52", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-tokyoIngenia07/anat/sub-tokyoIngenia07_flip-1_mt-on_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-tokyoIngenia07/anat/sub-tokyoIngenia07_flip-1_mt-on_space-other_MTS_label-SC_softseg.json index dedf7bd0ad..48489dce3d 100644 --- a/derivatives/labels_softseg/sub-tokyoIngenia07/anat/sub-tokyoIngenia07_flip-1_mt-on_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-tokyoIngenia07/anat/sub-tokyoIngenia07_flip-1_mt-on_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:52" + "Date": "2022-10-22 14:36:52", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-tokyoIngenia07/anat/sub-tokyoIngenia07_flip-2_mt-off_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-tokyoIngenia07/anat/sub-tokyoIngenia07_flip-2_mt-off_space-other_MTS_label-SC_softseg.json index dedf7bd0ad..48489dce3d 100644 --- a/derivatives/labels_softseg/sub-tokyoIngenia07/anat/sub-tokyoIngenia07_flip-2_mt-off_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-tokyoIngenia07/anat/sub-tokyoIngenia07_flip-2_mt-off_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:52" + "Date": "2022-10-22 14:36:52", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-tokyoIngenia07/anat/sub-tokyoIngenia07_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-tokyoIngenia07/anat/sub-tokyoIngenia07_space-other_T1w_label-SC_softseg.json index dedf7bd0ad..67f6f58f3b 100644 --- a/derivatives/labels_softseg/sub-tokyoIngenia07/anat/sub-tokyoIngenia07_space-other_T1w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-tokyoIngenia07/anat/sub-tokyoIngenia07_space-other_T1w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:52" + "Date": "2022-10-22 14:36:52", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-tokyoIngenia07/anat/sub-tokyoIngenia07_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-tokyoIngenia07/anat/sub-tokyoIngenia07_space-other_T2star_label-SC_softseg.json index dedf7bd0ad..b745d8b1eb 100644 --- a/derivatives/labels_softseg/sub-tokyoIngenia07/anat/sub-tokyoIngenia07_space-other_T2star_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-tokyoIngenia07/anat/sub-tokyoIngenia07_space-other_T2star_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:52" + "Date": "2022-10-22 14:36:52", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-tokyoIngenia07/anat/sub-tokyoIngenia07_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-tokyoIngenia07/anat/sub-tokyoIngenia07_space-other_T2w_label-SC_softseg.json index dedf7bd0ad..8b7354713a 100644 --- a/derivatives/labels_softseg/sub-tokyoIngenia07/anat/sub-tokyoIngenia07_space-other_T2w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-tokyoIngenia07/anat/sub-tokyoIngenia07_space-other_T2w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:52" + "Date": "2022-10-22 14:36:52", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-tokyoSkyra01/anat/sub-tokyoSkyra01_flip-1_mt-on_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-tokyoSkyra01/anat/sub-tokyoSkyra01_flip-1_mt-on_space-other_MTS_label-SC_softseg.json index dedf7bd0ad..48489dce3d 100644 --- a/derivatives/labels_softseg/sub-tokyoSkyra01/anat/sub-tokyoSkyra01_flip-1_mt-on_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-tokyoSkyra01/anat/sub-tokyoSkyra01_flip-1_mt-on_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:52" + "Date": "2022-10-22 14:36:52", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-tokyoSkyra01/anat/sub-tokyoSkyra01_flip-2_mt-off_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-tokyoSkyra01/anat/sub-tokyoSkyra01_flip-2_mt-off_space-other_MTS_label-SC_softseg.json index dedf7bd0ad..48489dce3d 100644 --- a/derivatives/labels_softseg/sub-tokyoSkyra01/anat/sub-tokyoSkyra01_flip-2_mt-off_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-tokyoSkyra01/anat/sub-tokyoSkyra01_flip-2_mt-off_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:52" + "Date": "2022-10-22 14:36:52", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-tokyoSkyra01/anat/sub-tokyoSkyra01_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-tokyoSkyra01/anat/sub-tokyoSkyra01_space-other_T1w_label-SC_softseg.json index b0a851e561..1d4a3b31e9 100644 --- a/derivatives/labels_softseg/sub-tokyoSkyra01/anat/sub-tokyoSkyra01_space-other_T1w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-tokyoSkyra01/anat/sub-tokyoSkyra01_space-other_T1w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:53" + "Date": "2022-10-22 14:36:53", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-tokyoSkyra01/anat/sub-tokyoSkyra01_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-tokyoSkyra01/anat/sub-tokyoSkyra01_space-other_T2star_label-SC_softseg.json index b0a851e561..f6e9b6929a 100644 --- a/derivatives/labels_softseg/sub-tokyoSkyra01/anat/sub-tokyoSkyra01_space-other_T2star_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-tokyoSkyra01/anat/sub-tokyoSkyra01_space-other_T2star_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:53" + "Date": "2022-10-22 14:36:53", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-tokyoSkyra01/anat/sub-tokyoSkyra01_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-tokyoSkyra01/anat/sub-tokyoSkyra01_space-other_T2w_label-SC_softseg.json index b0a851e561..076518ac94 100644 --- a/derivatives/labels_softseg/sub-tokyoSkyra01/anat/sub-tokyoSkyra01_space-other_T2w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-tokyoSkyra01/anat/sub-tokyoSkyra01_space-other_T2w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:53" + "Date": "2022-10-22 14:36:53", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-tokyoSkyra02/anat/sub-tokyoSkyra02_flip-1_mt-on_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-tokyoSkyra02/anat/sub-tokyoSkyra02_flip-1_mt-on_space-other_MTS_label-SC_softseg.json index b0a851e561..79ea89d4f7 100644 --- a/derivatives/labels_softseg/sub-tokyoSkyra02/anat/sub-tokyoSkyra02_flip-1_mt-on_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-tokyoSkyra02/anat/sub-tokyoSkyra02_flip-1_mt-on_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:53" + "Date": "2022-10-22 14:36:53", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-tokyoSkyra02/anat/sub-tokyoSkyra02_flip-2_mt-off_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-tokyoSkyra02/anat/sub-tokyoSkyra02_flip-2_mt-off_space-other_MTS_label-SC_softseg.json index b0a851e561..79ea89d4f7 100644 --- a/derivatives/labels_softseg/sub-tokyoSkyra02/anat/sub-tokyoSkyra02_flip-2_mt-off_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-tokyoSkyra02/anat/sub-tokyoSkyra02_flip-2_mt-off_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:53" + "Date": "2022-10-22 14:36:53", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-tokyoSkyra02/anat/sub-tokyoSkyra02_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-tokyoSkyra02/anat/sub-tokyoSkyra02_space-other_T1w_label-SC_softseg.json index b0a851e561..1d4a3b31e9 100644 --- a/derivatives/labels_softseg/sub-tokyoSkyra02/anat/sub-tokyoSkyra02_space-other_T1w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-tokyoSkyra02/anat/sub-tokyoSkyra02_space-other_T1w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:53" + "Date": "2022-10-22 14:36:53", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-tokyoSkyra02/anat/sub-tokyoSkyra02_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-tokyoSkyra02/anat/sub-tokyoSkyra02_space-other_T2star_label-SC_softseg.json index b0a851e561..f6e9b6929a 100644 --- a/derivatives/labels_softseg/sub-tokyoSkyra02/anat/sub-tokyoSkyra02_space-other_T2star_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-tokyoSkyra02/anat/sub-tokyoSkyra02_space-other_T2star_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:53" + "Date": "2022-10-22 14:36:53", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-tokyoSkyra02/anat/sub-tokyoSkyra02_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-tokyoSkyra02/anat/sub-tokyoSkyra02_space-other_T2w_label-SC_softseg.json index b0a851e561..076518ac94 100644 --- a/derivatives/labels_softseg/sub-tokyoSkyra02/anat/sub-tokyoSkyra02_space-other_T2w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-tokyoSkyra02/anat/sub-tokyoSkyra02_space-other_T2w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:53" + "Date": "2022-10-22 14:36:53", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-tokyoSkyra03/anat/sub-tokyoSkyra03_flip-1_mt-on_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-tokyoSkyra03/anat/sub-tokyoSkyra03_flip-1_mt-on_space-other_MTS_label-SC_softseg.json index b0a851e561..79ea89d4f7 100644 --- a/derivatives/labels_softseg/sub-tokyoSkyra03/anat/sub-tokyoSkyra03_flip-1_mt-on_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-tokyoSkyra03/anat/sub-tokyoSkyra03_flip-1_mt-on_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:53" + "Date": "2022-10-22 14:36:53", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-tokyoSkyra03/anat/sub-tokyoSkyra03_flip-2_mt-off_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-tokyoSkyra03/anat/sub-tokyoSkyra03_flip-2_mt-off_space-other_MTS_label-SC_softseg.json index b0a851e561..79ea89d4f7 100644 --- a/derivatives/labels_softseg/sub-tokyoSkyra03/anat/sub-tokyoSkyra03_flip-2_mt-off_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-tokyoSkyra03/anat/sub-tokyoSkyra03_flip-2_mt-off_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:53" + "Date": "2022-10-22 14:36:53", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-tokyoSkyra03/anat/sub-tokyoSkyra03_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-tokyoSkyra03/anat/sub-tokyoSkyra03_space-other_T1w_label-SC_softseg.json index b0a851e561..1d4a3b31e9 100644 --- a/derivatives/labels_softseg/sub-tokyoSkyra03/anat/sub-tokyoSkyra03_space-other_T1w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-tokyoSkyra03/anat/sub-tokyoSkyra03_space-other_T1w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:53" + "Date": "2022-10-22 14:36:53", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-tokyoSkyra03/anat/sub-tokyoSkyra03_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-tokyoSkyra03/anat/sub-tokyoSkyra03_space-other_T2star_label-SC_softseg.json index b0a851e561..f6e9b6929a 100644 --- a/derivatives/labels_softseg/sub-tokyoSkyra03/anat/sub-tokyoSkyra03_space-other_T2star_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-tokyoSkyra03/anat/sub-tokyoSkyra03_space-other_T2star_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:53" + "Date": "2022-10-22 14:36:53", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-tokyoSkyra03/anat/sub-tokyoSkyra03_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-tokyoSkyra03/anat/sub-tokyoSkyra03_space-other_T2w_label-SC_softseg.json index b0a851e561..076518ac94 100644 --- a/derivatives/labels_softseg/sub-tokyoSkyra03/anat/sub-tokyoSkyra03_space-other_T2w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-tokyoSkyra03/anat/sub-tokyoSkyra03_space-other_T2w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:53" + "Date": "2022-10-22 14:36:53", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-tokyoSkyra04/anat/sub-tokyoSkyra04_flip-1_mt-on_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-tokyoSkyra04/anat/sub-tokyoSkyra04_flip-1_mt-on_space-other_MTS_label-SC_softseg.json index b0a851e561..79ea89d4f7 100644 --- a/derivatives/labels_softseg/sub-tokyoSkyra04/anat/sub-tokyoSkyra04_flip-1_mt-on_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-tokyoSkyra04/anat/sub-tokyoSkyra04_flip-1_mt-on_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:53" + "Date": "2022-10-22 14:36:53", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-tokyoSkyra04/anat/sub-tokyoSkyra04_flip-2_mt-off_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-tokyoSkyra04/anat/sub-tokyoSkyra04_flip-2_mt-off_space-other_MTS_label-SC_softseg.json index b0a851e561..79ea89d4f7 100644 --- a/derivatives/labels_softseg/sub-tokyoSkyra04/anat/sub-tokyoSkyra04_flip-2_mt-off_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-tokyoSkyra04/anat/sub-tokyoSkyra04_flip-2_mt-off_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:53" + "Date": "2022-10-22 14:36:53", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-tokyoSkyra04/anat/sub-tokyoSkyra04_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-tokyoSkyra04/anat/sub-tokyoSkyra04_space-other_T1w_label-SC_softseg.json index b0a851e561..1d4a3b31e9 100644 --- a/derivatives/labels_softseg/sub-tokyoSkyra04/anat/sub-tokyoSkyra04_space-other_T1w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-tokyoSkyra04/anat/sub-tokyoSkyra04_space-other_T1w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:53" + "Date": "2022-10-22 14:36:53", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-tokyoSkyra04/anat/sub-tokyoSkyra04_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-tokyoSkyra04/anat/sub-tokyoSkyra04_space-other_T2star_label-SC_softseg.json index b0a851e561..f6e9b6929a 100644 --- a/derivatives/labels_softseg/sub-tokyoSkyra04/anat/sub-tokyoSkyra04_space-other_T2star_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-tokyoSkyra04/anat/sub-tokyoSkyra04_space-other_T2star_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:53" + "Date": "2022-10-22 14:36:53", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-tokyoSkyra04/anat/sub-tokyoSkyra04_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-tokyoSkyra04/anat/sub-tokyoSkyra04_space-other_T2w_label-SC_softseg.json index b0a851e561..076518ac94 100644 --- a/derivatives/labels_softseg/sub-tokyoSkyra04/anat/sub-tokyoSkyra04_space-other_T2w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-tokyoSkyra04/anat/sub-tokyoSkyra04_space-other_T2w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:53" + "Date": "2022-10-22 14:36:53", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-tokyoSkyra05/anat/sub-tokyoSkyra05_flip-1_mt-on_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-tokyoSkyra05/anat/sub-tokyoSkyra05_flip-1_mt-on_space-other_MTS_label-SC_softseg.json index 66beabb179..3728ff0dfa 100644 --- a/derivatives/labels_softseg/sub-tokyoSkyra05/anat/sub-tokyoSkyra05_flip-1_mt-on_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-tokyoSkyra05/anat/sub-tokyoSkyra05_flip-1_mt-on_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:54" + "Date": "2022-10-22 14:36:54", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-tokyoSkyra05/anat/sub-tokyoSkyra05_flip-2_mt-off_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-tokyoSkyra05/anat/sub-tokyoSkyra05_flip-2_mt-off_space-other_MTS_label-SC_softseg.json index 66beabb179..3728ff0dfa 100644 --- a/derivatives/labels_softseg/sub-tokyoSkyra05/anat/sub-tokyoSkyra05_flip-2_mt-off_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-tokyoSkyra05/anat/sub-tokyoSkyra05_flip-2_mt-off_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:54" + "Date": "2022-10-22 14:36:54", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-tokyoSkyra05/anat/sub-tokyoSkyra05_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-tokyoSkyra05/anat/sub-tokyoSkyra05_space-other_T1w_label-SC_softseg.json index 66beabb179..dbfa6648e5 100644 --- a/derivatives/labels_softseg/sub-tokyoSkyra05/anat/sub-tokyoSkyra05_space-other_T1w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-tokyoSkyra05/anat/sub-tokyoSkyra05_space-other_T1w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:54" + "Date": "2022-10-22 14:36:54", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-tokyoSkyra05/anat/sub-tokyoSkyra05_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-tokyoSkyra05/anat/sub-tokyoSkyra05_space-other_T2star_label-SC_softseg.json index 66beabb179..c60b53bee3 100644 --- a/derivatives/labels_softseg/sub-tokyoSkyra05/anat/sub-tokyoSkyra05_space-other_T2star_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-tokyoSkyra05/anat/sub-tokyoSkyra05_space-other_T2star_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:54" + "Date": "2022-10-22 14:36:54", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-tokyoSkyra05/anat/sub-tokyoSkyra05_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-tokyoSkyra05/anat/sub-tokyoSkyra05_space-other_T2w_label-SC_softseg.json index 66beabb179..bbf62dadcd 100644 --- a/derivatives/labels_softseg/sub-tokyoSkyra05/anat/sub-tokyoSkyra05_space-other_T2w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-tokyoSkyra05/anat/sub-tokyoSkyra05_space-other_T2w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:54" + "Date": "2022-10-22 14:36:54", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-tokyoSkyra06/anat/sub-tokyoSkyra06_flip-1_mt-on_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-tokyoSkyra06/anat/sub-tokyoSkyra06_flip-1_mt-on_space-other_MTS_label-SC_softseg.json index 66beabb179..3728ff0dfa 100644 --- a/derivatives/labels_softseg/sub-tokyoSkyra06/anat/sub-tokyoSkyra06_flip-1_mt-on_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-tokyoSkyra06/anat/sub-tokyoSkyra06_flip-1_mt-on_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:54" + "Date": "2022-10-22 14:36:54", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-tokyoSkyra06/anat/sub-tokyoSkyra06_flip-2_mt-off_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-tokyoSkyra06/anat/sub-tokyoSkyra06_flip-2_mt-off_space-other_MTS_label-SC_softseg.json index 66beabb179..3728ff0dfa 100644 --- a/derivatives/labels_softseg/sub-tokyoSkyra06/anat/sub-tokyoSkyra06_flip-2_mt-off_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-tokyoSkyra06/anat/sub-tokyoSkyra06_flip-2_mt-off_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:54" + "Date": "2022-10-22 14:36:54", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-tokyoSkyra06/anat/sub-tokyoSkyra06_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-tokyoSkyra06/anat/sub-tokyoSkyra06_space-other_T1w_label-SC_softseg.json index 66beabb179..dbfa6648e5 100644 --- a/derivatives/labels_softseg/sub-tokyoSkyra06/anat/sub-tokyoSkyra06_space-other_T1w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-tokyoSkyra06/anat/sub-tokyoSkyra06_space-other_T1w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:54" + "Date": "2022-10-22 14:36:54", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-tokyoSkyra06/anat/sub-tokyoSkyra06_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-tokyoSkyra06/anat/sub-tokyoSkyra06_space-other_T2star_label-SC_softseg.json index 66beabb179..c60b53bee3 100644 --- a/derivatives/labels_softseg/sub-tokyoSkyra06/anat/sub-tokyoSkyra06_space-other_T2star_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-tokyoSkyra06/anat/sub-tokyoSkyra06_space-other_T2star_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:54" + "Date": "2022-10-22 14:36:54", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-tokyoSkyra06/anat/sub-tokyoSkyra06_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-tokyoSkyra06/anat/sub-tokyoSkyra06_space-other_T2w_label-SC_softseg.json index 66beabb179..bbf62dadcd 100644 --- a/derivatives/labels_softseg/sub-tokyoSkyra06/anat/sub-tokyoSkyra06_space-other_T2w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-tokyoSkyra06/anat/sub-tokyoSkyra06_space-other_T2w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:54" + "Date": "2022-10-22 14:36:54", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-tokyoSkyra07/anat/sub-tokyoSkyra07_flip-1_mt-on_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-tokyoSkyra07/anat/sub-tokyoSkyra07_flip-1_mt-on_space-other_MTS_label-SC_softseg.json index 66beabb179..3728ff0dfa 100644 --- a/derivatives/labels_softseg/sub-tokyoSkyra07/anat/sub-tokyoSkyra07_flip-1_mt-on_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-tokyoSkyra07/anat/sub-tokyoSkyra07_flip-1_mt-on_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:54" + "Date": "2022-10-22 14:36:54", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-tokyoSkyra07/anat/sub-tokyoSkyra07_flip-2_mt-off_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-tokyoSkyra07/anat/sub-tokyoSkyra07_flip-2_mt-off_space-other_MTS_label-SC_softseg.json index 66beabb179..3728ff0dfa 100644 --- a/derivatives/labels_softseg/sub-tokyoSkyra07/anat/sub-tokyoSkyra07_flip-2_mt-off_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-tokyoSkyra07/anat/sub-tokyoSkyra07_flip-2_mt-off_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:54" + "Date": "2022-10-22 14:36:54", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-tokyoSkyra07/anat/sub-tokyoSkyra07_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-tokyoSkyra07/anat/sub-tokyoSkyra07_space-other_T1w_label-SC_softseg.json index 66beabb179..dbfa6648e5 100644 --- a/derivatives/labels_softseg/sub-tokyoSkyra07/anat/sub-tokyoSkyra07_space-other_T1w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-tokyoSkyra07/anat/sub-tokyoSkyra07_space-other_T1w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:54" + "Date": "2022-10-22 14:36:54", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-tokyoSkyra07/anat/sub-tokyoSkyra07_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-tokyoSkyra07/anat/sub-tokyoSkyra07_space-other_T2star_label-SC_softseg.json index 66beabb179..c60b53bee3 100644 --- a/derivatives/labels_softseg/sub-tokyoSkyra07/anat/sub-tokyoSkyra07_space-other_T2star_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-tokyoSkyra07/anat/sub-tokyoSkyra07_space-other_T2star_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:54" + "Date": "2022-10-22 14:36:54", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-tokyoSkyra07/anat/sub-tokyoSkyra07_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-tokyoSkyra07/anat/sub-tokyoSkyra07_space-other_T2w_label-SC_softseg.json index 66beabb179..bbf62dadcd 100644 --- a/derivatives/labels_softseg/sub-tokyoSkyra07/anat/sub-tokyoSkyra07_space-other_T2w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-tokyoSkyra07/anat/sub-tokyoSkyra07_space-other_T2w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:54" + "Date": "2022-10-22 14:36:54", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-ubc01/anat/sub-ubc01_flip-1_mt-on_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-ubc01/anat/sub-ubc01_flip-1_mt-on_space-other_MTS_label-SC_softseg.json index 66beabb179..3728ff0dfa 100644 --- a/derivatives/labels_softseg/sub-ubc01/anat/sub-ubc01_flip-1_mt-on_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-ubc01/anat/sub-ubc01_flip-1_mt-on_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:54" + "Date": "2022-10-22 14:36:54", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-ubc01/anat/sub-ubc01_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-ubc01/anat/sub-ubc01_space-other_T1w_label-SC_softseg.json index 66beabb179..dbfa6648e5 100644 --- a/derivatives/labels_softseg/sub-ubc01/anat/sub-ubc01_space-other_T1w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-ubc01/anat/sub-ubc01_space-other_T1w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:54" + "Date": "2022-10-22 14:36:54", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-ubc01/anat/sub-ubc01_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-ubc01/anat/sub-ubc01_space-other_T2star_label-SC_softseg.json index 66beabb179..c60b53bee3 100644 --- a/derivatives/labels_softseg/sub-ubc01/anat/sub-ubc01_space-other_T2star_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-ubc01/anat/sub-ubc01_space-other_T2star_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:54" + "Date": "2022-10-22 14:36:54", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-ubc01/anat/sub-ubc01_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-ubc01/anat/sub-ubc01_space-other_T2w_label-SC_softseg.json index 66beabb179..bbf62dadcd 100644 --- a/derivatives/labels_softseg/sub-ubc01/anat/sub-ubc01_space-other_T2w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-ubc01/anat/sub-ubc01_space-other_T2w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:54" + "Date": "2022-10-22 14:36:54", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-ubc02/anat/sub-ubc02_flip-1_mt-on_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-ubc02/anat/sub-ubc02_flip-1_mt-on_space-other_MTS_label-SC_softseg.json index 66beabb179..3728ff0dfa 100644 --- a/derivatives/labels_softseg/sub-ubc02/anat/sub-ubc02_flip-1_mt-on_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-ubc02/anat/sub-ubc02_flip-1_mt-on_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:54" + "Date": "2022-10-22 14:36:54", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-ubc02/anat/sub-ubc02_flip-2_mt-off_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-ubc02/anat/sub-ubc02_flip-2_mt-off_space-other_MTS_label-SC_softseg.json index 66beabb179..3728ff0dfa 100644 --- a/derivatives/labels_softseg/sub-ubc02/anat/sub-ubc02_flip-2_mt-off_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-ubc02/anat/sub-ubc02_flip-2_mt-off_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:54" + "Date": "2022-10-22 14:36:54", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-ubc02/anat/sub-ubc02_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-ubc02/anat/sub-ubc02_space-other_T1w_label-SC_softseg.json index 66beabb179..dbfa6648e5 100644 --- a/derivatives/labels_softseg/sub-ubc02/anat/sub-ubc02_space-other_T1w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-ubc02/anat/sub-ubc02_space-other_T1w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:54" + "Date": "2022-10-22 14:36:54", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-ubc02/anat/sub-ubc02_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-ubc02/anat/sub-ubc02_space-other_T2star_label-SC_softseg.json index 19c3fc2686..6621d417c6 100644 --- a/derivatives/labels_softseg/sub-ubc02/anat/sub-ubc02_space-other_T2star_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-ubc02/anat/sub-ubc02_space-other_T2star_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:55" + "Date": "2022-10-22 14:36:55", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-ubc02/anat/sub-ubc02_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-ubc02/anat/sub-ubc02_space-other_T2w_label-SC_softseg.json index 19c3fc2686..2cc4a471ca 100644 --- a/derivatives/labels_softseg/sub-ubc02/anat/sub-ubc02_space-other_T2w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-ubc02/anat/sub-ubc02_space-other_T2w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:55" + "Date": "2022-10-22 14:36:55", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-ubc03/anat/sub-ubc03_flip-1_mt-on_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-ubc03/anat/sub-ubc03_flip-1_mt-on_space-other_MTS_label-SC_softseg.json index 19c3fc2686..f6b4b40e0b 100644 --- a/derivatives/labels_softseg/sub-ubc03/anat/sub-ubc03_flip-1_mt-on_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-ubc03/anat/sub-ubc03_flip-1_mt-on_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:55" + "Date": "2022-10-22 14:36:55", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-ubc03/anat/sub-ubc03_flip-2_mt-off_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-ubc03/anat/sub-ubc03_flip-2_mt-off_space-other_MTS_label-SC_softseg.json index 19c3fc2686..f6b4b40e0b 100644 --- a/derivatives/labels_softseg/sub-ubc03/anat/sub-ubc03_flip-2_mt-off_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-ubc03/anat/sub-ubc03_flip-2_mt-off_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:55" + "Date": "2022-10-22 14:36:55", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-ubc03/anat/sub-ubc03_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-ubc03/anat/sub-ubc03_space-other_T1w_label-SC_softseg.json index 19c3fc2686..ccb246b725 100644 --- a/derivatives/labels_softseg/sub-ubc03/anat/sub-ubc03_space-other_T1w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-ubc03/anat/sub-ubc03_space-other_T1w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:55" + "Date": "2022-10-22 14:36:55", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-ubc03/anat/sub-ubc03_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-ubc03/anat/sub-ubc03_space-other_T2star_label-SC_softseg.json index 19c3fc2686..6621d417c6 100644 --- a/derivatives/labels_softseg/sub-ubc03/anat/sub-ubc03_space-other_T2star_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-ubc03/anat/sub-ubc03_space-other_T2star_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:55" + "Date": "2022-10-22 14:36:55", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-ubc03/anat/sub-ubc03_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-ubc03/anat/sub-ubc03_space-other_T2w_label-SC_softseg.json index 19c3fc2686..2cc4a471ca 100644 --- a/derivatives/labels_softseg/sub-ubc03/anat/sub-ubc03_space-other_T2w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-ubc03/anat/sub-ubc03_space-other_T2w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:55" + "Date": "2022-10-22 14:36:55", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-ubc04/anat/sub-ubc04_flip-1_mt-on_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-ubc04/anat/sub-ubc04_flip-1_mt-on_space-other_MTS_label-SC_softseg.json index 19c3fc2686..f6b4b40e0b 100644 --- a/derivatives/labels_softseg/sub-ubc04/anat/sub-ubc04_flip-1_mt-on_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-ubc04/anat/sub-ubc04_flip-1_mt-on_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:55" + "Date": "2022-10-22 14:36:55", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-ubc04/anat/sub-ubc04_flip-2_mt-off_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-ubc04/anat/sub-ubc04_flip-2_mt-off_space-other_MTS_label-SC_softseg.json index 19c3fc2686..f6b4b40e0b 100644 --- a/derivatives/labels_softseg/sub-ubc04/anat/sub-ubc04_flip-2_mt-off_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-ubc04/anat/sub-ubc04_flip-2_mt-off_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:55" + "Date": "2022-10-22 14:36:55", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-ubc04/anat/sub-ubc04_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-ubc04/anat/sub-ubc04_space-other_T1w_label-SC_softseg.json index 19c3fc2686..ccb246b725 100644 --- a/derivatives/labels_softseg/sub-ubc04/anat/sub-ubc04_space-other_T1w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-ubc04/anat/sub-ubc04_space-other_T1w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:55" + "Date": "2022-10-22 14:36:55", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-ubc04/anat/sub-ubc04_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-ubc04/anat/sub-ubc04_space-other_T2star_label-SC_softseg.json index 19c3fc2686..6621d417c6 100644 --- a/derivatives/labels_softseg/sub-ubc04/anat/sub-ubc04_space-other_T2star_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-ubc04/anat/sub-ubc04_space-other_T2star_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:55" + "Date": "2022-10-22 14:36:55", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-ubc04/anat/sub-ubc04_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-ubc04/anat/sub-ubc04_space-other_T2w_label-SC_softseg.json index 19c3fc2686..2cc4a471ca 100644 --- a/derivatives/labels_softseg/sub-ubc04/anat/sub-ubc04_space-other_T2w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-ubc04/anat/sub-ubc04_space-other_T2w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:55" + "Date": "2022-10-22 14:36:55", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-ubc05/anat/sub-ubc05_flip-1_mt-on_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-ubc05/anat/sub-ubc05_flip-1_mt-on_space-other_MTS_label-SC_softseg.json index 19c3fc2686..f6b4b40e0b 100644 --- a/derivatives/labels_softseg/sub-ubc05/anat/sub-ubc05_flip-1_mt-on_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-ubc05/anat/sub-ubc05_flip-1_mt-on_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:55" + "Date": "2022-10-22 14:36:55", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-ubc05/anat/sub-ubc05_flip-2_mt-off_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-ubc05/anat/sub-ubc05_flip-2_mt-off_space-other_MTS_label-SC_softseg.json index 19c3fc2686..f6b4b40e0b 100644 --- a/derivatives/labels_softseg/sub-ubc05/anat/sub-ubc05_flip-2_mt-off_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-ubc05/anat/sub-ubc05_flip-2_mt-off_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:55" + "Date": "2022-10-22 14:36:55", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-ubc05/anat/sub-ubc05_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-ubc05/anat/sub-ubc05_space-other_T1w_label-SC_softseg.json index 19c3fc2686..ccb246b725 100644 --- a/derivatives/labels_softseg/sub-ubc05/anat/sub-ubc05_space-other_T1w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-ubc05/anat/sub-ubc05_space-other_T1w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:55" + "Date": "2022-10-22 14:36:55", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-ubc05/anat/sub-ubc05_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-ubc05/anat/sub-ubc05_space-other_T2star_label-SC_softseg.json index 19c3fc2686..6621d417c6 100644 --- a/derivatives/labels_softseg/sub-ubc05/anat/sub-ubc05_space-other_T2star_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-ubc05/anat/sub-ubc05_space-other_T2star_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:55" + "Date": "2022-10-22 14:36:55", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-ubc05/anat/sub-ubc05_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-ubc05/anat/sub-ubc05_space-other_T2w_label-SC_softseg.json index 19c3fc2686..2cc4a471ca 100644 --- a/derivatives/labels_softseg/sub-ubc05/anat/sub-ubc05_space-other_T2w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-ubc05/anat/sub-ubc05_space-other_T2w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:55" + "Date": "2022-10-22 14:36:55", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-ubc06/anat/sub-ubc06_flip-1_mt-on_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-ubc06/anat/sub-ubc06_flip-1_mt-on_space-other_MTS_label-SC_softseg.json index 19c3fc2686..f6b4b40e0b 100644 --- a/derivatives/labels_softseg/sub-ubc06/anat/sub-ubc06_flip-1_mt-on_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-ubc06/anat/sub-ubc06_flip-1_mt-on_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:55" + "Date": "2022-10-22 14:36:55", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-ubc06/anat/sub-ubc06_flip-2_mt-off_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-ubc06/anat/sub-ubc06_flip-2_mt-off_space-other_MTS_label-SC_softseg.json index 19c3fc2686..f6b4b40e0b 100644 --- a/derivatives/labels_softseg/sub-ubc06/anat/sub-ubc06_flip-2_mt-off_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-ubc06/anat/sub-ubc06_flip-2_mt-off_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:55" + "Date": "2022-10-22 14:36:55", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-ubc06/anat/sub-ubc06_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-ubc06/anat/sub-ubc06_space-other_T1w_label-SC_softseg.json index 3edd32e833..b56e816b28 100644 --- a/derivatives/labels_softseg/sub-ubc06/anat/sub-ubc06_space-other_T1w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-ubc06/anat/sub-ubc06_space-other_T1w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:56" + "Date": "2022-10-22 14:36:56", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-ubc06/anat/sub-ubc06_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-ubc06/anat/sub-ubc06_space-other_T2star_label-SC_softseg.json index 3edd32e833..0c44905d0a 100644 --- a/derivatives/labels_softseg/sub-ubc06/anat/sub-ubc06_space-other_T2star_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-ubc06/anat/sub-ubc06_space-other_T2star_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:56" + "Date": "2022-10-22 14:36:56", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-ubc06/anat/sub-ubc06_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-ubc06/anat/sub-ubc06_space-other_T2w_label-SC_softseg.json index 3edd32e833..197223f7fa 100644 --- a/derivatives/labels_softseg/sub-ubc06/anat/sub-ubc06_space-other_T2w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-ubc06/anat/sub-ubc06_space-other_T2w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:56" + "Date": "2022-10-22 14:36:56", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-ucdavis01/anat/sub-ucdavis01_flip-1_mt-on_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-ucdavis01/anat/sub-ucdavis01_flip-1_mt-on_space-other_MTS_label-SC_softseg.json index 3edd32e833..e6395e3f77 100644 --- a/derivatives/labels_softseg/sub-ucdavis01/anat/sub-ucdavis01_flip-1_mt-on_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-ucdavis01/anat/sub-ucdavis01_flip-1_mt-on_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:56" + "Date": "2022-10-22 14:36:56", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-ucdavis01/anat/sub-ucdavis01_flip-2_mt-off_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-ucdavis01/anat/sub-ucdavis01_flip-2_mt-off_space-other_MTS_label-SC_softseg.json index 3edd32e833..e6395e3f77 100644 --- a/derivatives/labels_softseg/sub-ucdavis01/anat/sub-ucdavis01_flip-2_mt-off_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-ucdavis01/anat/sub-ucdavis01_flip-2_mt-off_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:56" + "Date": "2022-10-22 14:36:56", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-ucdavis01/anat/sub-ucdavis01_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-ucdavis01/anat/sub-ucdavis01_space-other_T1w_label-SC_softseg.json index 3edd32e833..b56e816b28 100644 --- a/derivatives/labels_softseg/sub-ucdavis01/anat/sub-ucdavis01_space-other_T1w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-ucdavis01/anat/sub-ucdavis01_space-other_T1w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:56" + "Date": "2022-10-22 14:36:56", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-ucdavis01/anat/sub-ucdavis01_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-ucdavis01/anat/sub-ucdavis01_space-other_T2star_label-SC_softseg.json index 3edd32e833..0c44905d0a 100644 --- a/derivatives/labels_softseg/sub-ucdavis01/anat/sub-ucdavis01_space-other_T2star_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-ucdavis01/anat/sub-ucdavis01_space-other_T2star_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:56" + "Date": "2022-10-22 14:36:56", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-ucdavis01/anat/sub-ucdavis01_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-ucdavis01/anat/sub-ucdavis01_space-other_T2w_label-SC_softseg.json index 3edd32e833..197223f7fa 100644 --- a/derivatives/labels_softseg/sub-ucdavis01/anat/sub-ucdavis01_space-other_T2w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-ucdavis01/anat/sub-ucdavis01_space-other_T2w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:56" + "Date": "2022-10-22 14:36:56", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-ucdavis02/anat/sub-ucdavis02_flip-1_mt-on_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-ucdavis02/anat/sub-ucdavis02_flip-1_mt-on_space-other_MTS_label-SC_softseg.json index 3edd32e833..e6395e3f77 100644 --- a/derivatives/labels_softseg/sub-ucdavis02/anat/sub-ucdavis02_flip-1_mt-on_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-ucdavis02/anat/sub-ucdavis02_flip-1_mt-on_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:56" + "Date": "2022-10-22 14:36:56", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-ucdavis02/anat/sub-ucdavis02_flip-2_mt-off_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-ucdavis02/anat/sub-ucdavis02_flip-2_mt-off_space-other_MTS_label-SC_softseg.json index 3edd32e833..e6395e3f77 100644 --- a/derivatives/labels_softseg/sub-ucdavis02/anat/sub-ucdavis02_flip-2_mt-off_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-ucdavis02/anat/sub-ucdavis02_flip-2_mt-off_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:56" + "Date": "2022-10-22 14:36:56", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-ucdavis02/anat/sub-ucdavis02_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-ucdavis02/anat/sub-ucdavis02_space-other_T1w_label-SC_softseg.json index 3edd32e833..b56e816b28 100644 --- a/derivatives/labels_softseg/sub-ucdavis02/anat/sub-ucdavis02_space-other_T1w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-ucdavis02/anat/sub-ucdavis02_space-other_T1w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:56" + "Date": "2022-10-22 14:36:56", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-ucdavis02/anat/sub-ucdavis02_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-ucdavis02/anat/sub-ucdavis02_space-other_T2star_label-SC_softseg.json index 3edd32e833..0c44905d0a 100644 --- a/derivatives/labels_softseg/sub-ucdavis02/anat/sub-ucdavis02_space-other_T2star_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-ucdavis02/anat/sub-ucdavis02_space-other_T2star_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:56" + "Date": "2022-10-22 14:36:56", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-ucdavis02/anat/sub-ucdavis02_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-ucdavis02/anat/sub-ucdavis02_space-other_T2w_label-SC_softseg.json index 3edd32e833..197223f7fa 100644 --- a/derivatives/labels_softseg/sub-ucdavis02/anat/sub-ucdavis02_space-other_T2w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-ucdavis02/anat/sub-ucdavis02_space-other_T2w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:56" + "Date": "2022-10-22 14:36:56", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-ucdavis03/anat/sub-ucdavis03_flip-1_mt-on_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-ucdavis03/anat/sub-ucdavis03_flip-1_mt-on_space-other_MTS_label-SC_softseg.json index 3edd32e833..e6395e3f77 100644 --- a/derivatives/labels_softseg/sub-ucdavis03/anat/sub-ucdavis03_flip-1_mt-on_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-ucdavis03/anat/sub-ucdavis03_flip-1_mt-on_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:56" + "Date": "2022-10-22 14:36:56", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-ucdavis03/anat/sub-ucdavis03_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-ucdavis03/anat/sub-ucdavis03_space-other_T1w_label-SC_softseg.json index 3edd32e833..b56e816b28 100644 --- a/derivatives/labels_softseg/sub-ucdavis03/anat/sub-ucdavis03_space-other_T1w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-ucdavis03/anat/sub-ucdavis03_space-other_T1w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:56" + "Date": "2022-10-22 14:36:56", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-ucdavis03/anat/sub-ucdavis03_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-ucdavis03/anat/sub-ucdavis03_space-other_T2star_label-SC_softseg.json index 3edd32e833..0c44905d0a 100644 --- a/derivatives/labels_softseg/sub-ucdavis03/anat/sub-ucdavis03_space-other_T2star_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-ucdavis03/anat/sub-ucdavis03_space-other_T2star_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:56" + "Date": "2022-10-22 14:36:56", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-ucdavis03/anat/sub-ucdavis03_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-ucdavis03/anat/sub-ucdavis03_space-other_T2w_label-SC_softseg.json index 3edd32e833..197223f7fa 100644 --- a/derivatives/labels_softseg/sub-ucdavis03/anat/sub-ucdavis03_space-other_T2w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-ucdavis03/anat/sub-ucdavis03_space-other_T2w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:56" + "Date": "2022-10-22 14:36:56", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-ucdavis04/anat/sub-ucdavis04_flip-1_mt-on_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-ucdavis04/anat/sub-ucdavis04_flip-1_mt-on_space-other_MTS_label-SC_softseg.json index 3edd32e833..e6395e3f77 100644 --- a/derivatives/labels_softseg/sub-ucdavis04/anat/sub-ucdavis04_flip-1_mt-on_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-ucdavis04/anat/sub-ucdavis04_flip-1_mt-on_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:56" + "Date": "2022-10-22 14:36:56", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-ucdavis04/anat/sub-ucdavis04_flip-2_mt-off_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-ucdavis04/anat/sub-ucdavis04_flip-2_mt-off_space-other_MTS_label-SC_softseg.json index 3edd32e833..e6395e3f77 100644 --- a/derivatives/labels_softseg/sub-ucdavis04/anat/sub-ucdavis04_flip-2_mt-off_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-ucdavis04/anat/sub-ucdavis04_flip-2_mt-off_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:56" + "Date": "2022-10-22 14:36:56", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-ucdavis04/anat/sub-ucdavis04_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-ucdavis04/anat/sub-ucdavis04_space-other_T1w_label-SC_softseg.json index 3edd32e833..b56e816b28 100644 --- a/derivatives/labels_softseg/sub-ucdavis04/anat/sub-ucdavis04_space-other_T1w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-ucdavis04/anat/sub-ucdavis04_space-other_T1w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:56" + "Date": "2022-10-22 14:36:56", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-ucdavis04/anat/sub-ucdavis04_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-ucdavis04/anat/sub-ucdavis04_space-other_T2star_label-SC_softseg.json index 3edd32e833..0c44905d0a 100644 --- a/derivatives/labels_softseg/sub-ucdavis04/anat/sub-ucdavis04_space-other_T2star_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-ucdavis04/anat/sub-ucdavis04_space-other_T2star_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:56" + "Date": "2022-10-22 14:36:56", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-ucdavis04/anat/sub-ucdavis04_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-ucdavis04/anat/sub-ucdavis04_space-other_T2w_label-SC_softseg.json index 3edd32e833..197223f7fa 100644 --- a/derivatives/labels_softseg/sub-ucdavis04/anat/sub-ucdavis04_space-other_T2w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-ucdavis04/anat/sub-ucdavis04_space-other_T2w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:56" + "Date": "2022-10-22 14:36:56", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-ucdavis05/anat/sub-ucdavis05_flip-1_mt-on_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-ucdavis05/anat/sub-ucdavis05_flip-1_mt-on_space-other_MTS_label-SC_softseg.json index 3edd32e833..e6395e3f77 100644 --- a/derivatives/labels_softseg/sub-ucdavis05/anat/sub-ucdavis05_flip-1_mt-on_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-ucdavis05/anat/sub-ucdavis05_flip-1_mt-on_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:56" + "Date": "2022-10-22 14:36:56", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-ucdavis05/anat/sub-ucdavis05_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-ucdavis05/anat/sub-ucdavis05_space-other_T1w_label-SC_softseg.json index 3edd32e833..b56e816b28 100644 --- a/derivatives/labels_softseg/sub-ucdavis05/anat/sub-ucdavis05_space-other_T1w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-ucdavis05/anat/sub-ucdavis05_space-other_T1w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:56" + "Date": "2022-10-22 14:36:56", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-ucdavis05/anat/sub-ucdavis05_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-ucdavis05/anat/sub-ucdavis05_space-other_T2star_label-SC_softseg.json index 3edd32e833..0c44905d0a 100644 --- a/derivatives/labels_softseg/sub-ucdavis05/anat/sub-ucdavis05_space-other_T2star_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-ucdavis05/anat/sub-ucdavis05_space-other_T2star_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:56" + "Date": "2022-10-22 14:36:56", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-ucdavis05/anat/sub-ucdavis05_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-ucdavis05/anat/sub-ucdavis05_space-other_T2w_label-SC_softseg.json index 3edd32e833..197223f7fa 100644 --- a/derivatives/labels_softseg/sub-ucdavis05/anat/sub-ucdavis05_space-other_T2w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-ucdavis05/anat/sub-ucdavis05_space-other_T2w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:56" + "Date": "2022-10-22 14:36:56", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-ucdavis06/anat/sub-ucdavis06_flip-1_mt-on_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-ucdavis06/anat/sub-ucdavis06_flip-1_mt-on_space-other_MTS_label-SC_softseg.json index d83729e1ff..36f825e009 100644 --- a/derivatives/labels_softseg/sub-ucdavis06/anat/sub-ucdavis06_flip-1_mt-on_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-ucdavis06/anat/sub-ucdavis06_flip-1_mt-on_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:57" + "Date": "2022-10-22 14:36:57", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-ucdavis06/anat/sub-ucdavis06_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-ucdavis06/anat/sub-ucdavis06_space-other_T1w_label-SC_softseg.json index d83729e1ff..9bab82f458 100644 --- a/derivatives/labels_softseg/sub-ucdavis06/anat/sub-ucdavis06_space-other_T1w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-ucdavis06/anat/sub-ucdavis06_space-other_T1w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:57" + "Date": "2022-10-22 14:36:57", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-ucdavis06/anat/sub-ucdavis06_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-ucdavis06/anat/sub-ucdavis06_space-other_T2star_label-SC_softseg.json index d83729e1ff..a127305914 100644 --- a/derivatives/labels_softseg/sub-ucdavis06/anat/sub-ucdavis06_space-other_T2star_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-ucdavis06/anat/sub-ucdavis06_space-other_T2star_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:57" + "Date": "2022-10-22 14:36:57", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-ucdavis06/anat/sub-ucdavis06_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-ucdavis06/anat/sub-ucdavis06_space-other_T2w_label-SC_softseg.json index d83729e1ff..c1836a8a67 100644 --- a/derivatives/labels_softseg/sub-ucdavis06/anat/sub-ucdavis06_space-other_T2w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-ucdavis06/anat/sub-ucdavis06_space-other_T2w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:57" + "Date": "2022-10-22 14:36:57", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-ucl01/anat/sub-ucl01_flip-1_mt-on_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-ucl01/anat/sub-ucl01_flip-1_mt-on_space-other_MTS_label-SC_softseg.json index d83729e1ff..36f825e009 100644 --- a/derivatives/labels_softseg/sub-ucl01/anat/sub-ucl01_flip-1_mt-on_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-ucl01/anat/sub-ucl01_flip-1_mt-on_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:57" + "Date": "2022-10-22 14:36:57", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-ucl01/anat/sub-ucl01_flip-2_mt-off_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-ucl01/anat/sub-ucl01_flip-2_mt-off_space-other_MTS_label-SC_softseg.json index d83729e1ff..36f825e009 100644 --- a/derivatives/labels_softseg/sub-ucl01/anat/sub-ucl01_flip-2_mt-off_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-ucl01/anat/sub-ucl01_flip-2_mt-off_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:57" + "Date": "2022-10-22 14:36:57", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-ucl01/anat/sub-ucl01_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-ucl01/anat/sub-ucl01_space-other_T1w_label-SC_softseg.json index d83729e1ff..9bab82f458 100644 --- a/derivatives/labels_softseg/sub-ucl01/anat/sub-ucl01_space-other_T1w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-ucl01/anat/sub-ucl01_space-other_T1w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:57" + "Date": "2022-10-22 14:36:57", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-ucl01/anat/sub-ucl01_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-ucl01/anat/sub-ucl01_space-other_T2star_label-SC_softseg.json index d83729e1ff..a127305914 100644 --- a/derivatives/labels_softseg/sub-ucl01/anat/sub-ucl01_space-other_T2star_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-ucl01/anat/sub-ucl01_space-other_T2star_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:57" + "Date": "2022-10-22 14:36:57", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-ucl01/anat/sub-ucl01_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-ucl01/anat/sub-ucl01_space-other_T2w_label-SC_softseg.json index d83729e1ff..c1836a8a67 100644 --- a/derivatives/labels_softseg/sub-ucl01/anat/sub-ucl01_space-other_T2w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-ucl01/anat/sub-ucl01_space-other_T2w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:57" + "Date": "2022-10-22 14:36:57", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-ucl02/anat/sub-ucl02_flip-1_mt-on_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-ucl02/anat/sub-ucl02_flip-1_mt-on_space-other_MTS_label-SC_softseg.json index d83729e1ff..36f825e009 100644 --- a/derivatives/labels_softseg/sub-ucl02/anat/sub-ucl02_flip-1_mt-on_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-ucl02/anat/sub-ucl02_flip-1_mt-on_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:57" + "Date": "2022-10-22 14:36:57", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-ucl02/anat/sub-ucl02_flip-2_mt-off_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-ucl02/anat/sub-ucl02_flip-2_mt-off_space-other_MTS_label-SC_softseg.json index d83729e1ff..36f825e009 100644 --- a/derivatives/labels_softseg/sub-ucl02/anat/sub-ucl02_flip-2_mt-off_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-ucl02/anat/sub-ucl02_flip-2_mt-off_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:57" + "Date": "2022-10-22 14:36:57", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-ucl02/anat/sub-ucl02_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-ucl02/anat/sub-ucl02_space-other_T1w_label-SC_softseg.json index d83729e1ff..9bab82f458 100644 --- a/derivatives/labels_softseg/sub-ucl02/anat/sub-ucl02_space-other_T1w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-ucl02/anat/sub-ucl02_space-other_T1w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:57" + "Date": "2022-10-22 14:36:57", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-ucl02/anat/sub-ucl02_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-ucl02/anat/sub-ucl02_space-other_T2star_label-SC_softseg.json index d83729e1ff..a127305914 100644 --- a/derivatives/labels_softseg/sub-ucl02/anat/sub-ucl02_space-other_T2star_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-ucl02/anat/sub-ucl02_space-other_T2star_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:57" + "Date": "2022-10-22 14:36:57", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-ucl02/anat/sub-ucl02_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-ucl02/anat/sub-ucl02_space-other_T2w_label-SC_softseg.json index d83729e1ff..c1836a8a67 100644 --- a/derivatives/labels_softseg/sub-ucl02/anat/sub-ucl02_space-other_T2w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-ucl02/anat/sub-ucl02_space-other_T2w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:57" + "Date": "2022-10-22 14:36:57", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-ucl03/anat/sub-ucl03_flip-1_mt-on_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-ucl03/anat/sub-ucl03_flip-1_mt-on_space-other_MTS_label-SC_softseg.json index 0715327c27..3f894fc92f 100644 --- a/derivatives/labels_softseg/sub-ucl03/anat/sub-ucl03_flip-1_mt-on_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-ucl03/anat/sub-ucl03_flip-1_mt-on_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:58" + "Date": "2022-10-22 14:36:58", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-ucl03/anat/sub-ucl03_flip-2_mt-off_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-ucl03/anat/sub-ucl03_flip-2_mt-off_space-other_MTS_label-SC_softseg.json index 0715327c27..3f894fc92f 100644 --- a/derivatives/labels_softseg/sub-ucl03/anat/sub-ucl03_flip-2_mt-off_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-ucl03/anat/sub-ucl03_flip-2_mt-off_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:58" + "Date": "2022-10-22 14:36:58", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-ucl03/anat/sub-ucl03_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-ucl03/anat/sub-ucl03_space-other_T1w_label-SC_softseg.json index 0715327c27..c5a7c1d9a3 100644 --- a/derivatives/labels_softseg/sub-ucl03/anat/sub-ucl03_space-other_T1w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-ucl03/anat/sub-ucl03_space-other_T1w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:58" + "Date": "2022-10-22 14:36:58", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-ucl03/anat/sub-ucl03_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-ucl03/anat/sub-ucl03_space-other_T2star_label-SC_softseg.json index 0715327c27..1c1fec505a 100644 --- a/derivatives/labels_softseg/sub-ucl03/anat/sub-ucl03_space-other_T2star_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-ucl03/anat/sub-ucl03_space-other_T2star_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:58" + "Date": "2022-10-22 14:36:58", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-ucl03/anat/sub-ucl03_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-ucl03/anat/sub-ucl03_space-other_T2w_label-SC_softseg.json index 0715327c27..02673d345b 100644 --- a/derivatives/labels_softseg/sub-ucl03/anat/sub-ucl03_space-other_T2w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-ucl03/anat/sub-ucl03_space-other_T2w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:58" + "Date": "2022-10-22 14:36:58", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-ucl04/anat/sub-ucl04_flip-1_mt-on_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-ucl04/anat/sub-ucl04_flip-1_mt-on_space-other_MTS_label-SC_softseg.json index 0715327c27..3f894fc92f 100644 --- a/derivatives/labels_softseg/sub-ucl04/anat/sub-ucl04_flip-1_mt-on_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-ucl04/anat/sub-ucl04_flip-1_mt-on_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:58" + "Date": "2022-10-22 14:36:58", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-ucl04/anat/sub-ucl04_flip-2_mt-off_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-ucl04/anat/sub-ucl04_flip-2_mt-off_space-other_MTS_label-SC_softseg.json index 0715327c27..3f894fc92f 100644 --- a/derivatives/labels_softseg/sub-ucl04/anat/sub-ucl04_flip-2_mt-off_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-ucl04/anat/sub-ucl04_flip-2_mt-off_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:58" + "Date": "2022-10-22 14:36:58", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-ucl04/anat/sub-ucl04_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-ucl04/anat/sub-ucl04_space-other_T1w_label-SC_softseg.json index 0715327c27..c5a7c1d9a3 100644 --- a/derivatives/labels_softseg/sub-ucl04/anat/sub-ucl04_space-other_T1w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-ucl04/anat/sub-ucl04_space-other_T1w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:58" + "Date": "2022-10-22 14:36:58", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-ucl04/anat/sub-ucl04_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-ucl04/anat/sub-ucl04_space-other_T2star_label-SC_softseg.json index 0715327c27..1c1fec505a 100644 --- a/derivatives/labels_softseg/sub-ucl04/anat/sub-ucl04_space-other_T2star_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-ucl04/anat/sub-ucl04_space-other_T2star_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:58" + "Date": "2022-10-22 14:36:58", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-ucl04/anat/sub-ucl04_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-ucl04/anat/sub-ucl04_space-other_T2w_label-SC_softseg.json index 0715327c27..02673d345b 100644 --- a/derivatives/labels_softseg/sub-ucl04/anat/sub-ucl04_space-other_T2w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-ucl04/anat/sub-ucl04_space-other_T2w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:58" + "Date": "2022-10-22 14:36:58", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-ucl05/anat/sub-ucl05_flip-1_mt-on_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-ucl05/anat/sub-ucl05_flip-1_mt-on_space-other_MTS_label-SC_softseg.json index 0715327c27..3f894fc92f 100644 --- a/derivatives/labels_softseg/sub-ucl05/anat/sub-ucl05_flip-1_mt-on_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-ucl05/anat/sub-ucl05_flip-1_mt-on_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:58" + "Date": "2022-10-22 14:36:58", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-ucl05/anat/sub-ucl05_flip-2_mt-off_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-ucl05/anat/sub-ucl05_flip-2_mt-off_space-other_MTS_label-SC_softseg.json index 0715327c27..3f894fc92f 100644 --- a/derivatives/labels_softseg/sub-ucl05/anat/sub-ucl05_flip-2_mt-off_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-ucl05/anat/sub-ucl05_flip-2_mt-off_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:58" + "Date": "2022-10-22 14:36:58", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-ucl05/anat/sub-ucl05_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-ucl05/anat/sub-ucl05_space-other_T1w_label-SC_softseg.json index 0715327c27..c5a7c1d9a3 100644 --- a/derivatives/labels_softseg/sub-ucl05/anat/sub-ucl05_space-other_T1w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-ucl05/anat/sub-ucl05_space-other_T1w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:58" + "Date": "2022-10-22 14:36:58", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-ucl05/anat/sub-ucl05_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-ucl05/anat/sub-ucl05_space-other_T2star_label-SC_softseg.json index 0715327c27..1c1fec505a 100644 --- a/derivatives/labels_softseg/sub-ucl05/anat/sub-ucl05_space-other_T2star_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-ucl05/anat/sub-ucl05_space-other_T2star_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:58" + "Date": "2022-10-22 14:36:58", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-ucl05/anat/sub-ucl05_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-ucl05/anat/sub-ucl05_space-other_T2w_label-SC_softseg.json index 0715327c27..02673d345b 100644 --- a/derivatives/labels_softseg/sub-ucl05/anat/sub-ucl05_space-other_T2w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-ucl05/anat/sub-ucl05_space-other_T2w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:58" + "Date": "2022-10-22 14:36:58", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-ucl06/anat/sub-ucl06_flip-1_mt-on_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-ucl06/anat/sub-ucl06_flip-1_mt-on_space-other_MTS_label-SC_softseg.json index 0715327c27..3f894fc92f 100644 --- a/derivatives/labels_softseg/sub-ucl06/anat/sub-ucl06_flip-1_mt-on_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-ucl06/anat/sub-ucl06_flip-1_mt-on_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:58" + "Date": "2022-10-22 14:36:58", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-ucl06/anat/sub-ucl06_flip-2_mt-off_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-ucl06/anat/sub-ucl06_flip-2_mt-off_space-other_MTS_label-SC_softseg.json index 0715327c27..3f894fc92f 100644 --- a/derivatives/labels_softseg/sub-ucl06/anat/sub-ucl06_flip-2_mt-off_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-ucl06/anat/sub-ucl06_flip-2_mt-off_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:58" + "Date": "2022-10-22 14:36:58", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-ucl06/anat/sub-ucl06_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-ucl06/anat/sub-ucl06_space-other_T1w_label-SC_softseg.json index 0715327c27..c5a7c1d9a3 100644 --- a/derivatives/labels_softseg/sub-ucl06/anat/sub-ucl06_space-other_T1w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-ucl06/anat/sub-ucl06_space-other_T1w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:58" + "Date": "2022-10-22 14:36:58", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-ucl06/anat/sub-ucl06_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-ucl06/anat/sub-ucl06_space-other_T2star_label-SC_softseg.json index 0715327c27..1c1fec505a 100644 --- a/derivatives/labels_softseg/sub-ucl06/anat/sub-ucl06_space-other_T2star_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-ucl06/anat/sub-ucl06_space-other_T2star_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:58" + "Date": "2022-10-22 14:36:58", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-ucl06/anat/sub-ucl06_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-ucl06/anat/sub-ucl06_space-other_T2w_label-SC_softseg.json index 0715327c27..02673d345b 100644 --- a/derivatives/labels_softseg/sub-ucl06/anat/sub-ucl06_space-other_T2w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-ucl06/anat/sub-ucl06_space-other_T2w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:58" + "Date": "2022-10-22 14:36:58", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-unf01/anat/sub-unf01_flip-1_mt-on_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-unf01/anat/sub-unf01_flip-1_mt-on_space-other_MTS_label-SC_softseg.json index 0715327c27..3f894fc92f 100644 --- a/derivatives/labels_softseg/sub-unf01/anat/sub-unf01_flip-1_mt-on_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-unf01/anat/sub-unf01_flip-1_mt-on_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:58" + "Date": "2022-10-22 14:36:58", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-unf01/anat/sub-unf01_flip-2_mt-off_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-unf01/anat/sub-unf01_flip-2_mt-off_space-other_MTS_label-SC_softseg.json index 0715327c27..3f894fc92f 100644 --- a/derivatives/labels_softseg/sub-unf01/anat/sub-unf01_flip-2_mt-off_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-unf01/anat/sub-unf01_flip-2_mt-off_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:58" + "Date": "2022-10-22 14:36:58", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-unf01/anat/sub-unf01_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-unf01/anat/sub-unf01_space-other_T1w_label-SC_softseg.json index 0715327c27..c5a7c1d9a3 100644 --- a/derivatives/labels_softseg/sub-unf01/anat/sub-unf01_space-other_T1w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-unf01/anat/sub-unf01_space-other_T1w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:58" + "Date": "2022-10-22 14:36:58", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-unf01/anat/sub-unf01_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-unf01/anat/sub-unf01_space-other_T2star_label-SC_softseg.json index d21aef3049..b5368e3cdb 100644 --- a/derivatives/labels_softseg/sub-unf01/anat/sub-unf01_space-other_T2star_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-unf01/anat/sub-unf01_space-other_T2star_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:59" + "Date": "2022-10-22 14:36:59", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-unf01/anat/sub-unf01_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-unf01/anat/sub-unf01_space-other_T2w_label-SC_softseg.json index d21aef3049..613dd8c66f 100644 --- a/derivatives/labels_softseg/sub-unf01/anat/sub-unf01_space-other_T2w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-unf01/anat/sub-unf01_space-other_T2w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:59" + "Date": "2022-10-22 14:36:59", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-unf02/anat/sub-unf02_flip-1_mt-on_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-unf02/anat/sub-unf02_flip-1_mt-on_space-other_MTS_label-SC_softseg.json index d21aef3049..d390eb3a9e 100644 --- a/derivatives/labels_softseg/sub-unf02/anat/sub-unf02_flip-1_mt-on_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-unf02/anat/sub-unf02_flip-1_mt-on_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:59" + "Date": "2022-10-22 14:36:59", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-unf02/anat/sub-unf02_flip-2_mt-off_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-unf02/anat/sub-unf02_flip-2_mt-off_space-other_MTS_label-SC_softseg.json index d21aef3049..d390eb3a9e 100644 --- a/derivatives/labels_softseg/sub-unf02/anat/sub-unf02_flip-2_mt-off_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-unf02/anat/sub-unf02_flip-2_mt-off_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:59" + "Date": "2022-10-22 14:36:59", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-unf02/anat/sub-unf02_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-unf02/anat/sub-unf02_space-other_T1w_label-SC_softseg.json index d21aef3049..a0f1676066 100644 --- a/derivatives/labels_softseg/sub-unf02/anat/sub-unf02_space-other_T1w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-unf02/anat/sub-unf02_space-other_T1w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:59" + "Date": "2022-10-22 14:36:59", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-unf02/anat/sub-unf02_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-unf02/anat/sub-unf02_space-other_T2star_label-SC_softseg.json index d21aef3049..b5368e3cdb 100644 --- a/derivatives/labels_softseg/sub-unf02/anat/sub-unf02_space-other_T2star_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-unf02/anat/sub-unf02_space-other_T2star_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:59" + "Date": "2022-10-22 14:36:59", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-unf02/anat/sub-unf02_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-unf02/anat/sub-unf02_space-other_T2w_label-SC_softseg.json index d21aef3049..613dd8c66f 100644 --- a/derivatives/labels_softseg/sub-unf02/anat/sub-unf02_space-other_T2w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-unf02/anat/sub-unf02_space-other_T2w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:59" + "Date": "2022-10-22 14:36:59", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-unf03/anat/sub-unf03_flip-1_mt-on_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-unf03/anat/sub-unf03_flip-1_mt-on_space-other_MTS_label-SC_softseg.json index d21aef3049..d390eb3a9e 100644 --- a/derivatives/labels_softseg/sub-unf03/anat/sub-unf03_flip-1_mt-on_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-unf03/anat/sub-unf03_flip-1_mt-on_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:59" + "Date": "2022-10-22 14:36:59", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-unf03/anat/sub-unf03_flip-2_mt-off_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-unf03/anat/sub-unf03_flip-2_mt-off_space-other_MTS_label-SC_softseg.json index d21aef3049..d390eb3a9e 100644 --- a/derivatives/labels_softseg/sub-unf03/anat/sub-unf03_flip-2_mt-off_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-unf03/anat/sub-unf03_flip-2_mt-off_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:59" + "Date": "2022-10-22 14:36:59", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-unf03/anat/sub-unf03_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-unf03/anat/sub-unf03_space-other_T1w_label-SC_softseg.json index d21aef3049..a0f1676066 100644 --- a/derivatives/labels_softseg/sub-unf03/anat/sub-unf03_space-other_T1w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-unf03/anat/sub-unf03_space-other_T1w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:59" + "Date": "2022-10-22 14:36:59", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-unf03/anat/sub-unf03_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-unf03/anat/sub-unf03_space-other_T2star_label-SC_softseg.json index d21aef3049..b5368e3cdb 100644 --- a/derivatives/labels_softseg/sub-unf03/anat/sub-unf03_space-other_T2star_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-unf03/anat/sub-unf03_space-other_T2star_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:59" + "Date": "2022-10-22 14:36:59", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-unf03/anat/sub-unf03_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-unf03/anat/sub-unf03_space-other_T2w_label-SC_softseg.json index d21aef3049..613dd8c66f 100644 --- a/derivatives/labels_softseg/sub-unf03/anat/sub-unf03_space-other_T2w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-unf03/anat/sub-unf03_space-other_T2w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:59" + "Date": "2022-10-22 14:36:59", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-unf04/anat/sub-unf04_flip-1_mt-on_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-unf04/anat/sub-unf04_flip-1_mt-on_space-other_MTS_label-SC_softseg.json index d21aef3049..d390eb3a9e 100644 --- a/derivatives/labels_softseg/sub-unf04/anat/sub-unf04_flip-1_mt-on_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-unf04/anat/sub-unf04_flip-1_mt-on_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:59" + "Date": "2022-10-22 14:36:59", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-unf04/anat/sub-unf04_flip-2_mt-off_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-unf04/anat/sub-unf04_flip-2_mt-off_space-other_MTS_label-SC_softseg.json index d21aef3049..d390eb3a9e 100644 --- a/derivatives/labels_softseg/sub-unf04/anat/sub-unf04_flip-2_mt-off_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-unf04/anat/sub-unf04_flip-2_mt-off_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:59" + "Date": "2022-10-22 14:36:59", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-unf04/anat/sub-unf04_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-unf04/anat/sub-unf04_space-other_T1w_label-SC_softseg.json index d21aef3049..a0f1676066 100644 --- a/derivatives/labels_softseg/sub-unf04/anat/sub-unf04_space-other_T1w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-unf04/anat/sub-unf04_space-other_T1w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:59" + "Date": "2022-10-22 14:36:59", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-unf04/anat/sub-unf04_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-unf04/anat/sub-unf04_space-other_T2star_label-SC_softseg.json index d21aef3049..b5368e3cdb 100644 --- a/derivatives/labels_softseg/sub-unf04/anat/sub-unf04_space-other_T2star_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-unf04/anat/sub-unf04_space-other_T2star_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:59" + "Date": "2022-10-22 14:36:59", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-unf04/anat/sub-unf04_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-unf04/anat/sub-unf04_space-other_T2w_label-SC_softseg.json index d21aef3049..613dd8c66f 100644 --- a/derivatives/labels_softseg/sub-unf04/anat/sub-unf04_space-other_T2w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-unf04/anat/sub-unf04_space-other_T2w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:59" + "Date": "2022-10-22 14:36:59", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-unf05/anat/sub-unf05_flip-1_mt-on_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-unf05/anat/sub-unf05_flip-1_mt-on_space-other_MTS_label-SC_softseg.json index d21aef3049..d390eb3a9e 100644 --- a/derivatives/labels_softseg/sub-unf05/anat/sub-unf05_flip-1_mt-on_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-unf05/anat/sub-unf05_flip-1_mt-on_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:59" + "Date": "2022-10-22 14:36:59", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-unf05/anat/sub-unf05_flip-2_mt-off_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-unf05/anat/sub-unf05_flip-2_mt-off_space-other_MTS_label-SC_softseg.json index d21aef3049..d390eb3a9e 100644 --- a/derivatives/labels_softseg/sub-unf05/anat/sub-unf05_flip-2_mt-off_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-unf05/anat/sub-unf05_flip-2_mt-off_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:59" + "Date": "2022-10-22 14:36:59", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-unf05/anat/sub-unf05_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-unf05/anat/sub-unf05_space-other_T1w_label-SC_softseg.json index d21aef3049..a0f1676066 100644 --- a/derivatives/labels_softseg/sub-unf05/anat/sub-unf05_space-other_T1w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-unf05/anat/sub-unf05_space-other_T1w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:59" + "Date": "2022-10-22 14:36:59", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-unf05/anat/sub-unf05_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-unf05/anat/sub-unf05_space-other_T2star_label-SC_softseg.json index 16762e94c9..81efb1ee29 100644 --- a/derivatives/labels_softseg/sub-unf05/anat/sub-unf05_space-other_T2star_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-unf05/anat/sub-unf05_space-other_T2star_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:37:00" + "Date": "2022-10-22 14:37:00", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-unf05/anat/sub-unf05_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-unf05/anat/sub-unf05_space-other_T2w_label-SC_softseg.json index 16762e94c9..c604376374 100644 --- a/derivatives/labels_softseg/sub-unf05/anat/sub-unf05_space-other_T2w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-unf05/anat/sub-unf05_space-other_T2w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:37:00" + "Date": "2022-10-22 14:37:00", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-unf06/anat/sub-unf06_flip-1_mt-on_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-unf06/anat/sub-unf06_flip-1_mt-on_space-other_MTS_label-SC_softseg.json index 16762e94c9..05af99e192 100644 --- a/derivatives/labels_softseg/sub-unf06/anat/sub-unf06_flip-1_mt-on_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-unf06/anat/sub-unf06_flip-1_mt-on_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:37:00" + "Date": "2022-10-22 14:37:00", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-unf06/anat/sub-unf06_flip-2_mt-off_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-unf06/anat/sub-unf06_flip-2_mt-off_space-other_MTS_label-SC_softseg.json index 16762e94c9..05af99e192 100644 --- a/derivatives/labels_softseg/sub-unf06/anat/sub-unf06_flip-2_mt-off_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-unf06/anat/sub-unf06_flip-2_mt-off_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:37:00" + "Date": "2022-10-22 14:37:00", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-unf06/anat/sub-unf06_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-unf06/anat/sub-unf06_space-other_T1w_label-SC_softseg.json index 16762e94c9..ba168c3c5c 100644 --- a/derivatives/labels_softseg/sub-unf06/anat/sub-unf06_space-other_T1w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-unf06/anat/sub-unf06_space-other_T1w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:37:00" + "Date": "2022-10-22 14:37:00", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-unf06/anat/sub-unf06_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-unf06/anat/sub-unf06_space-other_T2star_label-SC_softseg.json index 16762e94c9..81efb1ee29 100644 --- a/derivatives/labels_softseg/sub-unf06/anat/sub-unf06_space-other_T2star_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-unf06/anat/sub-unf06_space-other_T2star_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:37:00" + "Date": "2022-10-22 14:37:00", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-unf06/anat/sub-unf06_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-unf06/anat/sub-unf06_space-other_T2w_label-SC_softseg.json index 16762e94c9..c604376374 100644 --- a/derivatives/labels_softseg/sub-unf06/anat/sub-unf06_space-other_T2w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-unf06/anat/sub-unf06_space-other_T2w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:37:00" + "Date": "2022-10-22 14:37:00", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-unf07/anat/sub-unf07_flip-1_mt-on_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-unf07/anat/sub-unf07_flip-1_mt-on_space-other_MTS_label-SC_softseg.json index 16762e94c9..05af99e192 100644 --- a/derivatives/labels_softseg/sub-unf07/anat/sub-unf07_flip-1_mt-on_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-unf07/anat/sub-unf07_flip-1_mt-on_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:37:00" + "Date": "2022-10-22 14:37:00", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-unf07/anat/sub-unf07_flip-2_mt-off_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-unf07/anat/sub-unf07_flip-2_mt-off_space-other_MTS_label-SC_softseg.json index 16762e94c9..05af99e192 100644 --- a/derivatives/labels_softseg/sub-unf07/anat/sub-unf07_flip-2_mt-off_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-unf07/anat/sub-unf07_flip-2_mt-off_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:37:00" + "Date": "2022-10-22 14:37:00", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-unf07/anat/sub-unf07_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-unf07/anat/sub-unf07_space-other_T1w_label-SC_softseg.json index 16762e94c9..ba168c3c5c 100644 --- a/derivatives/labels_softseg/sub-unf07/anat/sub-unf07_space-other_T1w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-unf07/anat/sub-unf07_space-other_T1w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:37:00" + "Date": "2022-10-22 14:37:00", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-unf07/anat/sub-unf07_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-unf07/anat/sub-unf07_space-other_T2star_label-SC_softseg.json index 16762e94c9..81efb1ee29 100644 --- a/derivatives/labels_softseg/sub-unf07/anat/sub-unf07_space-other_T2star_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-unf07/anat/sub-unf07_space-other_T2star_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:37:00" + "Date": "2022-10-22 14:37:00", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-unf07/anat/sub-unf07_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-unf07/anat/sub-unf07_space-other_T2w_label-SC_softseg.json index 16762e94c9..c604376374 100644 --- a/derivatives/labels_softseg/sub-unf07/anat/sub-unf07_space-other_T2w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-unf07/anat/sub-unf07_space-other_T2w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:37:00" + "Date": "2022-10-22 14:37:00", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-vallHebron01/anat/sub-vallHebron01_flip-1_mt-on_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-vallHebron01/anat/sub-vallHebron01_flip-1_mt-on_space-other_MTS_label-SC_softseg.json index 16762e94c9..05af99e192 100644 --- a/derivatives/labels_softseg/sub-vallHebron01/anat/sub-vallHebron01_flip-1_mt-on_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-vallHebron01/anat/sub-vallHebron01_flip-1_mt-on_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:37:00" + "Date": "2022-10-22 14:37:00", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-vallHebron01/anat/sub-vallHebron01_flip-2_mt-off_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-vallHebron01/anat/sub-vallHebron01_flip-2_mt-off_space-other_MTS_label-SC_softseg.json index 16762e94c9..05af99e192 100644 --- a/derivatives/labels_softseg/sub-vallHebron01/anat/sub-vallHebron01_flip-2_mt-off_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-vallHebron01/anat/sub-vallHebron01_flip-2_mt-off_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:37:00" + "Date": "2022-10-22 14:37:00", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-vallHebron01/anat/sub-vallHebron01_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-vallHebron01/anat/sub-vallHebron01_space-other_T1w_label-SC_softseg.json index 16762e94c9..ba168c3c5c 100644 --- a/derivatives/labels_softseg/sub-vallHebron01/anat/sub-vallHebron01_space-other_T1w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-vallHebron01/anat/sub-vallHebron01_space-other_T1w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:37:00" + "Date": "2022-10-22 14:37:00", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-vallHebron01/anat/sub-vallHebron01_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-vallHebron01/anat/sub-vallHebron01_space-other_T2star_label-SC_softseg.json index 16762e94c9..81efb1ee29 100644 --- a/derivatives/labels_softseg/sub-vallHebron01/anat/sub-vallHebron01_space-other_T2star_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-vallHebron01/anat/sub-vallHebron01_space-other_T2star_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:37:00" + "Date": "2022-10-22 14:37:00", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-vallHebron01/anat/sub-vallHebron01_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-vallHebron01/anat/sub-vallHebron01_space-other_T2w_label-SC_softseg.json index 16762e94c9..c604376374 100644 --- a/derivatives/labels_softseg/sub-vallHebron01/anat/sub-vallHebron01_space-other_T2w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-vallHebron01/anat/sub-vallHebron01_space-other_T2w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:37:00" + "Date": "2022-10-22 14:37:00", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-vallHebron02/anat/sub-vallHebron02_flip-1_mt-on_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-vallHebron02/anat/sub-vallHebron02_flip-1_mt-on_space-other_MTS_label-SC_softseg.json index 16762e94c9..05af99e192 100644 --- a/derivatives/labels_softseg/sub-vallHebron02/anat/sub-vallHebron02_flip-1_mt-on_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-vallHebron02/anat/sub-vallHebron02_flip-1_mt-on_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:37:00" + "Date": "2022-10-22 14:37:00", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-vallHebron02/anat/sub-vallHebron02_flip-2_mt-off_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-vallHebron02/anat/sub-vallHebron02_flip-2_mt-off_space-other_MTS_label-SC_softseg.json index 16762e94c9..05af99e192 100644 --- a/derivatives/labels_softseg/sub-vallHebron02/anat/sub-vallHebron02_flip-2_mt-off_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-vallHebron02/anat/sub-vallHebron02_flip-2_mt-off_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:37:00" + "Date": "2022-10-22 14:37:00", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-vallHebron02/anat/sub-vallHebron02_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-vallHebron02/anat/sub-vallHebron02_space-other_T1w_label-SC_softseg.json index 16762e94c9..ba168c3c5c 100644 --- a/derivatives/labels_softseg/sub-vallHebron02/anat/sub-vallHebron02_space-other_T1w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-vallHebron02/anat/sub-vallHebron02_space-other_T1w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:37:00" + "Date": "2022-10-22 14:37:00", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-vallHebron02/anat/sub-vallHebron02_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-vallHebron02/anat/sub-vallHebron02_space-other_T2star_label-SC_softseg.json index 16762e94c9..81efb1ee29 100644 --- a/derivatives/labels_softseg/sub-vallHebron02/anat/sub-vallHebron02_space-other_T2star_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-vallHebron02/anat/sub-vallHebron02_space-other_T2star_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:37:00" + "Date": "2022-10-22 14:37:00", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-vallHebron02/anat/sub-vallHebron02_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-vallHebron02/anat/sub-vallHebron02_space-other_T2w_label-SC_softseg.json index 16762e94c9..c604376374 100644 --- a/derivatives/labels_softseg/sub-vallHebron02/anat/sub-vallHebron02_space-other_T2w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-vallHebron02/anat/sub-vallHebron02_space-other_T2w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:37:00" + "Date": "2022-10-22 14:37:00", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-vallHebron03/anat/sub-vallHebron03_flip-1_mt-on_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-vallHebron03/anat/sub-vallHebron03_flip-1_mt-on_space-other_MTS_label-SC_softseg.json index e911b38d69..f5bedd3d97 100644 --- a/derivatives/labels_softseg/sub-vallHebron03/anat/sub-vallHebron03_flip-1_mt-on_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-vallHebron03/anat/sub-vallHebron03_flip-1_mt-on_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:37:01" + "Date": "2022-10-22 14:37:01", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-vallHebron03/anat/sub-vallHebron03_flip-2_mt-off_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-vallHebron03/anat/sub-vallHebron03_flip-2_mt-off_space-other_MTS_label-SC_softseg.json index e911b38d69..f5bedd3d97 100644 --- a/derivatives/labels_softseg/sub-vallHebron03/anat/sub-vallHebron03_flip-2_mt-off_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-vallHebron03/anat/sub-vallHebron03_flip-2_mt-off_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:37:01" + "Date": "2022-10-22 14:37:01", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-vallHebron03/anat/sub-vallHebron03_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-vallHebron03/anat/sub-vallHebron03_space-other_T1w_label-SC_softseg.json index e911b38d69..cf15b583ee 100644 --- a/derivatives/labels_softseg/sub-vallHebron03/anat/sub-vallHebron03_space-other_T1w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-vallHebron03/anat/sub-vallHebron03_space-other_T1w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:37:01" + "Date": "2022-10-22 14:37:01", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-vallHebron03/anat/sub-vallHebron03_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-vallHebron03/anat/sub-vallHebron03_space-other_T2star_label-SC_softseg.json index e911b38d69..f12e0fa441 100644 --- a/derivatives/labels_softseg/sub-vallHebron03/anat/sub-vallHebron03_space-other_T2star_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-vallHebron03/anat/sub-vallHebron03_space-other_T2star_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:37:01" + "Date": "2022-10-22 14:37:01", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-vallHebron03/anat/sub-vallHebron03_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-vallHebron03/anat/sub-vallHebron03_space-other_T2w_label-SC_softseg.json index e911b38d69..4d5d061f63 100644 --- a/derivatives/labels_softseg/sub-vallHebron03/anat/sub-vallHebron03_space-other_T2w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-vallHebron03/anat/sub-vallHebron03_space-other_T2w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:37:01" + "Date": "2022-10-22 14:37:01", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-vallHebron04/anat/sub-vallHebron04_flip-1_mt-on_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-vallHebron04/anat/sub-vallHebron04_flip-1_mt-on_space-other_MTS_label-SC_softseg.json index e911b38d69..f5bedd3d97 100644 --- a/derivatives/labels_softseg/sub-vallHebron04/anat/sub-vallHebron04_flip-1_mt-on_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-vallHebron04/anat/sub-vallHebron04_flip-1_mt-on_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:37:01" + "Date": "2022-10-22 14:37:01", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-vallHebron04/anat/sub-vallHebron04_flip-2_mt-off_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-vallHebron04/anat/sub-vallHebron04_flip-2_mt-off_space-other_MTS_label-SC_softseg.json index e911b38d69..f5bedd3d97 100644 --- a/derivatives/labels_softseg/sub-vallHebron04/anat/sub-vallHebron04_flip-2_mt-off_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-vallHebron04/anat/sub-vallHebron04_flip-2_mt-off_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:37:01" + "Date": "2022-10-22 14:37:01", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-vallHebron04/anat/sub-vallHebron04_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-vallHebron04/anat/sub-vallHebron04_space-other_T1w_label-SC_softseg.json index e911b38d69..cf15b583ee 100644 --- a/derivatives/labels_softseg/sub-vallHebron04/anat/sub-vallHebron04_space-other_T1w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-vallHebron04/anat/sub-vallHebron04_space-other_T1w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:37:01" + "Date": "2022-10-22 14:37:01", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-vallHebron04/anat/sub-vallHebron04_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-vallHebron04/anat/sub-vallHebron04_space-other_T2star_label-SC_softseg.json index e911b38d69..f12e0fa441 100644 --- a/derivatives/labels_softseg/sub-vallHebron04/anat/sub-vallHebron04_space-other_T2star_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-vallHebron04/anat/sub-vallHebron04_space-other_T2star_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:37:01" + "Date": "2022-10-22 14:37:01", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-vallHebron04/anat/sub-vallHebron04_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-vallHebron04/anat/sub-vallHebron04_space-other_T2w_label-SC_softseg.json index e911b38d69..4d5d061f63 100644 --- a/derivatives/labels_softseg/sub-vallHebron04/anat/sub-vallHebron04_space-other_T2w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-vallHebron04/anat/sub-vallHebron04_space-other_T2w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:37:01" + "Date": "2022-10-22 14:37:01", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-vallHebron05/anat/sub-vallHebron05_flip-1_mt-on_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-vallHebron05/anat/sub-vallHebron05_flip-1_mt-on_space-other_MTS_label-SC_softseg.json index e911b38d69..f5bedd3d97 100644 --- a/derivatives/labels_softseg/sub-vallHebron05/anat/sub-vallHebron05_flip-1_mt-on_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-vallHebron05/anat/sub-vallHebron05_flip-1_mt-on_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:37:01" + "Date": "2022-10-22 14:37:01", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-vallHebron05/anat/sub-vallHebron05_flip-2_mt-off_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-vallHebron05/anat/sub-vallHebron05_flip-2_mt-off_space-other_MTS_label-SC_softseg.json index e911b38d69..f5bedd3d97 100644 --- a/derivatives/labels_softseg/sub-vallHebron05/anat/sub-vallHebron05_flip-2_mt-off_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-vallHebron05/anat/sub-vallHebron05_flip-2_mt-off_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:37:01" + "Date": "2022-10-22 14:37:01", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-vallHebron05/anat/sub-vallHebron05_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-vallHebron05/anat/sub-vallHebron05_space-other_T1w_label-SC_softseg.json index e911b38d69..cf15b583ee 100644 --- a/derivatives/labels_softseg/sub-vallHebron05/anat/sub-vallHebron05_space-other_T1w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-vallHebron05/anat/sub-vallHebron05_space-other_T1w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:37:01" + "Date": "2022-10-22 14:37:01", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-vallHebron05/anat/sub-vallHebron05_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-vallHebron05/anat/sub-vallHebron05_space-other_T2star_label-SC_softseg.json index e911b38d69..f12e0fa441 100644 --- a/derivatives/labels_softseg/sub-vallHebron05/anat/sub-vallHebron05_space-other_T2star_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-vallHebron05/anat/sub-vallHebron05_space-other_T2star_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:37:01" + "Date": "2022-10-22 14:37:01", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-vallHebron05/anat/sub-vallHebron05_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-vallHebron05/anat/sub-vallHebron05_space-other_T2w_label-SC_softseg.json index e911b38d69..4d5d061f63 100644 --- a/derivatives/labels_softseg/sub-vallHebron05/anat/sub-vallHebron05_space-other_T2w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-vallHebron05/anat/sub-vallHebron05_space-other_T2w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:37:01" + "Date": "2022-10-22 14:37:01", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-vallHebron06/anat/sub-vallHebron06_flip-1_mt-on_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-vallHebron06/anat/sub-vallHebron06_flip-1_mt-on_space-other_MTS_label-SC_softseg.json index e911b38d69..f5bedd3d97 100644 --- a/derivatives/labels_softseg/sub-vallHebron06/anat/sub-vallHebron06_flip-1_mt-on_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-vallHebron06/anat/sub-vallHebron06_flip-1_mt-on_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:37:01" + "Date": "2022-10-22 14:37:01", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-vallHebron06/anat/sub-vallHebron06_flip-2_mt-off_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-vallHebron06/anat/sub-vallHebron06_flip-2_mt-off_space-other_MTS_label-SC_softseg.json index e911b38d69..f5bedd3d97 100644 --- a/derivatives/labels_softseg/sub-vallHebron06/anat/sub-vallHebron06_flip-2_mt-off_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-vallHebron06/anat/sub-vallHebron06_flip-2_mt-off_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:37:01" + "Date": "2022-10-22 14:37:01", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-vallHebron06/anat/sub-vallHebron06_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-vallHebron06/anat/sub-vallHebron06_space-other_T1w_label-SC_softseg.json index ebcdc52a0b..91c5eb3ca5 100644 --- a/derivatives/labels_softseg/sub-vallHebron06/anat/sub-vallHebron06_space-other_T1w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-vallHebron06/anat/sub-vallHebron06_space-other_T1w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:37:02" + "Date": "2022-10-22 14:37:02", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-vallHebron06/anat/sub-vallHebron06_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-vallHebron06/anat/sub-vallHebron06_space-other_T2star_label-SC_softseg.json index ebcdc52a0b..6468d6773f 100644 --- a/derivatives/labels_softseg/sub-vallHebron06/anat/sub-vallHebron06_space-other_T2star_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-vallHebron06/anat/sub-vallHebron06_space-other_T2star_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:37:02" + "Date": "2022-10-22 14:37:02", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-vallHebron06/anat/sub-vallHebron06_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-vallHebron06/anat/sub-vallHebron06_space-other_T2w_label-SC_softseg.json index ebcdc52a0b..746e64424f 100644 --- a/derivatives/labels_softseg/sub-vallHebron06/anat/sub-vallHebron06_space-other_T2w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-vallHebron06/anat/sub-vallHebron06_space-other_T2w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:37:02" + "Date": "2022-10-22 14:37:02", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-vallHebron07/anat/sub-vallHebron07_flip-1_mt-on_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-vallHebron07/anat/sub-vallHebron07_flip-1_mt-on_space-other_MTS_label-SC_softseg.json index ebcdc52a0b..d247f901de 100644 --- a/derivatives/labels_softseg/sub-vallHebron07/anat/sub-vallHebron07_flip-1_mt-on_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-vallHebron07/anat/sub-vallHebron07_flip-1_mt-on_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:37:02" + "Date": "2022-10-22 14:37:02", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-vallHebron07/anat/sub-vallHebron07_flip-2_mt-off_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-vallHebron07/anat/sub-vallHebron07_flip-2_mt-off_space-other_MTS_label-SC_softseg.json index ebcdc52a0b..d247f901de 100644 --- a/derivatives/labels_softseg/sub-vallHebron07/anat/sub-vallHebron07_flip-2_mt-off_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-vallHebron07/anat/sub-vallHebron07_flip-2_mt-off_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:37:02" + "Date": "2022-10-22 14:37:02", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-vallHebron07/anat/sub-vallHebron07_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-vallHebron07/anat/sub-vallHebron07_space-other_T1w_label-SC_softseg.json index ebcdc52a0b..91c5eb3ca5 100644 --- a/derivatives/labels_softseg/sub-vallHebron07/anat/sub-vallHebron07_space-other_T1w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-vallHebron07/anat/sub-vallHebron07_space-other_T1w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:37:02" + "Date": "2022-10-22 14:37:02", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-vallHebron07/anat/sub-vallHebron07_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-vallHebron07/anat/sub-vallHebron07_space-other_T2star_label-SC_softseg.json index ebcdc52a0b..6468d6773f 100644 --- a/derivatives/labels_softseg/sub-vallHebron07/anat/sub-vallHebron07_space-other_T2star_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-vallHebron07/anat/sub-vallHebron07_space-other_T2star_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:37:02" + "Date": "2022-10-22 14:37:02", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-vallHebron07/anat/sub-vallHebron07_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-vallHebron07/anat/sub-vallHebron07_space-other_T2w_label-SC_softseg.json index ebcdc52a0b..746e64424f 100644 --- a/derivatives/labels_softseg/sub-vallHebron07/anat/sub-vallHebron07_space-other_T2w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-vallHebron07/anat/sub-vallHebron07_space-other_T2w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:37:02" + "Date": "2022-10-22 14:37:02", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-vuiisAchieva01/anat/sub-vuiisAchieva01_flip-1_mt-on_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-vuiisAchieva01/anat/sub-vuiisAchieva01_flip-1_mt-on_space-other_MTS_label-SC_softseg.json index ebcdc52a0b..d247f901de 100644 --- a/derivatives/labels_softseg/sub-vuiisAchieva01/anat/sub-vuiisAchieva01_flip-1_mt-on_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-vuiisAchieva01/anat/sub-vuiisAchieva01_flip-1_mt-on_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:37:02" + "Date": "2022-10-22 14:37:02", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-vuiisAchieva01/anat/sub-vuiisAchieva01_flip-2_mt-off_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-vuiisAchieva01/anat/sub-vuiisAchieva01_flip-2_mt-off_space-other_MTS_label-SC_softseg.json index ebcdc52a0b..d247f901de 100644 --- a/derivatives/labels_softseg/sub-vuiisAchieva01/anat/sub-vuiisAchieva01_flip-2_mt-off_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-vuiisAchieva01/anat/sub-vuiisAchieva01_flip-2_mt-off_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:37:02" + "Date": "2022-10-22 14:37:02", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-vuiisAchieva01/anat/sub-vuiisAchieva01_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-vuiisAchieva01/anat/sub-vuiisAchieva01_space-other_T1w_label-SC_softseg.json index ebcdc52a0b..91c5eb3ca5 100644 --- a/derivatives/labels_softseg/sub-vuiisAchieva01/anat/sub-vuiisAchieva01_space-other_T1w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-vuiisAchieva01/anat/sub-vuiisAchieva01_space-other_T1w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:37:02" + "Date": "2022-10-22 14:37:02", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-vuiisAchieva01/anat/sub-vuiisAchieva01_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-vuiisAchieva01/anat/sub-vuiisAchieva01_space-other_T2star_label-SC_softseg.json index ebcdc52a0b..6468d6773f 100644 --- a/derivatives/labels_softseg/sub-vuiisAchieva01/anat/sub-vuiisAchieva01_space-other_T2star_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-vuiisAchieva01/anat/sub-vuiisAchieva01_space-other_T2star_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:37:02" + "Date": "2022-10-22 14:37:02", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-vuiisAchieva01/anat/sub-vuiisAchieva01_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-vuiisAchieva01/anat/sub-vuiisAchieva01_space-other_T2w_label-SC_softseg.json index ebcdc52a0b..746e64424f 100644 --- a/derivatives/labels_softseg/sub-vuiisAchieva01/anat/sub-vuiisAchieva01_space-other_T2w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-vuiisAchieva01/anat/sub-vuiisAchieva01_space-other_T2w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:37:02" + "Date": "2022-10-22 14:37:02", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-vuiisAchieva02/anat/sub-vuiisAchieva02_flip-1_mt-on_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-vuiisAchieva02/anat/sub-vuiisAchieva02_flip-1_mt-on_space-other_MTS_label-SC_softseg.json index ebcdc52a0b..d247f901de 100644 --- a/derivatives/labels_softseg/sub-vuiisAchieva02/anat/sub-vuiisAchieva02_flip-1_mt-on_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-vuiisAchieva02/anat/sub-vuiisAchieva02_flip-1_mt-on_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:37:02" + "Date": "2022-10-22 14:37:02", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-vuiisAchieva02/anat/sub-vuiisAchieva02_flip-2_mt-off_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-vuiisAchieva02/anat/sub-vuiisAchieva02_flip-2_mt-off_space-other_MTS_label-SC_softseg.json index ebcdc52a0b..d247f901de 100644 --- a/derivatives/labels_softseg/sub-vuiisAchieva02/anat/sub-vuiisAchieva02_flip-2_mt-off_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-vuiisAchieva02/anat/sub-vuiisAchieva02_flip-2_mt-off_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:37:02" + "Date": "2022-10-22 14:37:02", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-vuiisAchieva02/anat/sub-vuiisAchieva02_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-vuiisAchieva02/anat/sub-vuiisAchieva02_space-other_T1w_label-SC_softseg.json index ebcdc52a0b..91c5eb3ca5 100644 --- a/derivatives/labels_softseg/sub-vuiisAchieva02/anat/sub-vuiisAchieva02_space-other_T1w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-vuiisAchieva02/anat/sub-vuiisAchieva02_space-other_T1w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:37:02" + "Date": "2022-10-22 14:37:02", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-vuiisAchieva02/anat/sub-vuiisAchieva02_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-vuiisAchieva02/anat/sub-vuiisAchieva02_space-other_T2star_label-SC_softseg.json index ebcdc52a0b..6468d6773f 100644 --- a/derivatives/labels_softseg/sub-vuiisAchieva02/anat/sub-vuiisAchieva02_space-other_T2star_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-vuiisAchieva02/anat/sub-vuiisAchieva02_space-other_T2star_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:37:02" + "Date": "2022-10-22 14:37:02", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-vuiisAchieva02/anat/sub-vuiisAchieva02_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-vuiisAchieva02/anat/sub-vuiisAchieva02_space-other_T2w_label-SC_softseg.json index ebcdc52a0b..746e64424f 100644 --- a/derivatives/labels_softseg/sub-vuiisAchieva02/anat/sub-vuiisAchieva02_space-other_T2w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-vuiisAchieva02/anat/sub-vuiisAchieva02_space-other_T2w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:37:02" + "Date": "2022-10-22 14:37:02", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-vuiisAchieva03/anat/sub-vuiisAchieva03_flip-1_mt-on_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-vuiisAchieva03/anat/sub-vuiisAchieva03_flip-1_mt-on_space-other_MTS_label-SC_softseg.json index ebcdc52a0b..d247f901de 100644 --- a/derivatives/labels_softseg/sub-vuiisAchieva03/anat/sub-vuiisAchieva03_flip-1_mt-on_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-vuiisAchieva03/anat/sub-vuiisAchieva03_flip-1_mt-on_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:37:02" + "Date": "2022-10-22 14:37:02", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-vuiisAchieva03/anat/sub-vuiisAchieva03_flip-2_mt-off_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-vuiisAchieva03/anat/sub-vuiisAchieva03_flip-2_mt-off_space-other_MTS_label-SC_softseg.json index ebcdc52a0b..d247f901de 100644 --- a/derivatives/labels_softseg/sub-vuiisAchieva03/anat/sub-vuiisAchieva03_flip-2_mt-off_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-vuiisAchieva03/anat/sub-vuiisAchieva03_flip-2_mt-off_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:37:02" + "Date": "2022-10-22 14:37:02", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-vuiisAchieva03/anat/sub-vuiisAchieva03_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-vuiisAchieva03/anat/sub-vuiisAchieva03_space-other_T1w_label-SC_softseg.json index d5ddbff332..2ccbfcf9f6 100644 --- a/derivatives/labels_softseg/sub-vuiisAchieva03/anat/sub-vuiisAchieva03_space-other_T1w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-vuiisAchieva03/anat/sub-vuiisAchieva03_space-other_T1w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:37:03" + "Date": "2022-10-22 14:37:03", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-vuiisAchieva03/anat/sub-vuiisAchieva03_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-vuiisAchieva03/anat/sub-vuiisAchieva03_space-other_T2star_label-SC_softseg.json index d5ddbff332..053bd33493 100644 --- a/derivatives/labels_softseg/sub-vuiisAchieva03/anat/sub-vuiisAchieva03_space-other_T2star_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-vuiisAchieva03/anat/sub-vuiisAchieva03_space-other_T2star_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:37:03" + "Date": "2022-10-22 14:37:03", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-vuiisAchieva03/anat/sub-vuiisAchieva03_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-vuiisAchieva03/anat/sub-vuiisAchieva03_space-other_T2w_label-SC_softseg.json index d5ddbff332..9debc010f6 100644 --- a/derivatives/labels_softseg/sub-vuiisAchieva03/anat/sub-vuiisAchieva03_space-other_T2w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-vuiisAchieva03/anat/sub-vuiisAchieva03_space-other_T2w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:37:03" + "Date": "2022-10-22 14:37:03", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-vuiisAchieva04/anat/sub-vuiisAchieva04_flip-1_mt-on_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-vuiisAchieva04/anat/sub-vuiisAchieva04_flip-1_mt-on_space-other_MTS_label-SC_softseg.json index d5ddbff332..0808d265ac 100644 --- a/derivatives/labels_softseg/sub-vuiisAchieva04/anat/sub-vuiisAchieva04_flip-1_mt-on_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-vuiisAchieva04/anat/sub-vuiisAchieva04_flip-1_mt-on_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:37:03" + "Date": "2022-10-22 14:37:03", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-vuiisAchieva04/anat/sub-vuiisAchieva04_flip-2_mt-off_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-vuiisAchieva04/anat/sub-vuiisAchieva04_flip-2_mt-off_space-other_MTS_label-SC_softseg.json index d5ddbff332..0808d265ac 100644 --- a/derivatives/labels_softseg/sub-vuiisAchieva04/anat/sub-vuiisAchieva04_flip-2_mt-off_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-vuiisAchieva04/anat/sub-vuiisAchieva04_flip-2_mt-off_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:37:03" + "Date": "2022-10-22 14:37:03", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-vuiisAchieva04/anat/sub-vuiisAchieva04_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-vuiisAchieva04/anat/sub-vuiisAchieva04_space-other_T1w_label-SC_softseg.json index d5ddbff332..2ccbfcf9f6 100644 --- a/derivatives/labels_softseg/sub-vuiisAchieva04/anat/sub-vuiisAchieva04_space-other_T1w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-vuiisAchieva04/anat/sub-vuiisAchieva04_space-other_T1w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:37:03" + "Date": "2022-10-22 14:37:03", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-vuiisAchieva04/anat/sub-vuiisAchieva04_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-vuiisAchieva04/anat/sub-vuiisAchieva04_space-other_T2star_label-SC_softseg.json index d5ddbff332..053bd33493 100644 --- a/derivatives/labels_softseg/sub-vuiisAchieva04/anat/sub-vuiisAchieva04_space-other_T2star_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-vuiisAchieva04/anat/sub-vuiisAchieva04_space-other_T2star_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:37:03" + "Date": "2022-10-22 14:37:03", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-vuiisAchieva04/anat/sub-vuiisAchieva04_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-vuiisAchieva04/anat/sub-vuiisAchieva04_space-other_T2w_label-SC_softseg.json index d5ddbff332..9debc010f6 100644 --- a/derivatives/labels_softseg/sub-vuiisAchieva04/anat/sub-vuiisAchieva04_space-other_T2w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-vuiisAchieva04/anat/sub-vuiisAchieva04_space-other_T2w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:37:03" + "Date": "2022-10-22 14:37:03", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-vuiisAchieva05/anat/sub-vuiisAchieva05_flip-1_mt-on_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-vuiisAchieva05/anat/sub-vuiisAchieva05_flip-1_mt-on_space-other_MTS_label-SC_softseg.json index d5ddbff332..0808d265ac 100644 --- a/derivatives/labels_softseg/sub-vuiisAchieva05/anat/sub-vuiisAchieva05_flip-1_mt-on_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-vuiisAchieva05/anat/sub-vuiisAchieva05_flip-1_mt-on_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:37:03" + "Date": "2022-10-22 14:37:03", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-vuiisAchieva05/anat/sub-vuiisAchieva05_flip-2_mt-off_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-vuiisAchieva05/anat/sub-vuiisAchieva05_flip-2_mt-off_space-other_MTS_label-SC_softseg.json index d5ddbff332..0808d265ac 100644 --- a/derivatives/labels_softseg/sub-vuiisAchieva05/anat/sub-vuiisAchieva05_flip-2_mt-off_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-vuiisAchieva05/anat/sub-vuiisAchieva05_flip-2_mt-off_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:37:03" + "Date": "2022-10-22 14:37:03", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-vuiisAchieva05/anat/sub-vuiisAchieva05_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-vuiisAchieva05/anat/sub-vuiisAchieva05_space-other_T1w_label-SC_softseg.json index d5ddbff332..2ccbfcf9f6 100644 --- a/derivatives/labels_softseg/sub-vuiisAchieva05/anat/sub-vuiisAchieva05_space-other_T1w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-vuiisAchieva05/anat/sub-vuiisAchieva05_space-other_T1w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:37:03" + "Date": "2022-10-22 14:37:03", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-vuiisAchieva05/anat/sub-vuiisAchieva05_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-vuiisAchieva05/anat/sub-vuiisAchieva05_space-other_T2star_label-SC_softseg.json index d5ddbff332..053bd33493 100644 --- a/derivatives/labels_softseg/sub-vuiisAchieva05/anat/sub-vuiisAchieva05_space-other_T2star_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-vuiisAchieva05/anat/sub-vuiisAchieva05_space-other_T2star_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:37:03" + "Date": "2022-10-22 14:37:03", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-vuiisAchieva05/anat/sub-vuiisAchieva05_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-vuiisAchieva05/anat/sub-vuiisAchieva05_space-other_T2w_label-SC_softseg.json index d5ddbff332..9debc010f6 100644 --- a/derivatives/labels_softseg/sub-vuiisAchieva05/anat/sub-vuiisAchieva05_space-other_T2w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-vuiisAchieva05/anat/sub-vuiisAchieva05_space-other_T2w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:37:03" + "Date": "2022-10-22 14:37:03", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-vuiisAchieva06/anat/sub-vuiisAchieva06_flip-1_mt-on_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-vuiisAchieva06/anat/sub-vuiisAchieva06_flip-1_mt-on_space-other_MTS_label-SC_softseg.json index d5ddbff332..0808d265ac 100644 --- a/derivatives/labels_softseg/sub-vuiisAchieva06/anat/sub-vuiisAchieva06_flip-1_mt-on_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-vuiisAchieva06/anat/sub-vuiisAchieva06_flip-1_mt-on_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:37:03" + "Date": "2022-10-22 14:37:03", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-vuiisAchieva06/anat/sub-vuiisAchieva06_flip-2_mt-off_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-vuiisAchieva06/anat/sub-vuiisAchieva06_flip-2_mt-off_space-other_MTS_label-SC_softseg.json index d5ddbff332..0808d265ac 100644 --- a/derivatives/labels_softseg/sub-vuiisAchieva06/anat/sub-vuiisAchieva06_flip-2_mt-off_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-vuiisAchieva06/anat/sub-vuiisAchieva06_flip-2_mt-off_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:37:03" + "Date": "2022-10-22 14:37:03", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-vuiisAchieva06/anat/sub-vuiisAchieva06_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-vuiisAchieva06/anat/sub-vuiisAchieva06_space-other_T1w_label-SC_softseg.json index d5ddbff332..2ccbfcf9f6 100644 --- a/derivatives/labels_softseg/sub-vuiisAchieva06/anat/sub-vuiisAchieva06_space-other_T1w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-vuiisAchieva06/anat/sub-vuiisAchieva06_space-other_T1w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:37:03" + "Date": "2022-10-22 14:37:03", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-vuiisAchieva06/anat/sub-vuiisAchieva06_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-vuiisAchieva06/anat/sub-vuiisAchieva06_space-other_T2star_label-SC_softseg.json index d5ddbff332..053bd33493 100644 --- a/derivatives/labels_softseg/sub-vuiisAchieva06/anat/sub-vuiisAchieva06_space-other_T2star_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-vuiisAchieva06/anat/sub-vuiisAchieva06_space-other_T2star_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:37:03" + "Date": "2022-10-22 14:37:03", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-vuiisAchieva06/anat/sub-vuiisAchieva06_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-vuiisAchieva06/anat/sub-vuiisAchieva06_space-other_T2w_label-SC_softseg.json index d5ddbff332..9debc010f6 100644 --- a/derivatives/labels_softseg/sub-vuiisAchieva06/anat/sub-vuiisAchieva06_space-other_T2w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-vuiisAchieva06/anat/sub-vuiisAchieva06_space-other_T2w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:37:03" + "Date": "2022-10-22 14:37:03", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-vuiisIngenia01/anat/sub-vuiisIngenia01_flip-1_mt-on_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-vuiisIngenia01/anat/sub-vuiisIngenia01_flip-1_mt-on_space-other_MTS_label-SC_softseg.json index d5ddbff332..0808d265ac 100644 --- a/derivatives/labels_softseg/sub-vuiisIngenia01/anat/sub-vuiisIngenia01_flip-1_mt-on_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-vuiisIngenia01/anat/sub-vuiisIngenia01_flip-1_mt-on_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:37:03" + "Date": "2022-10-22 14:37:03", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-vuiisIngenia01/anat/sub-vuiisIngenia01_flip-2_mt-off_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-vuiisIngenia01/anat/sub-vuiisIngenia01_flip-2_mt-off_space-other_MTS_label-SC_softseg.json index d5ddbff332..0808d265ac 100644 --- a/derivatives/labels_softseg/sub-vuiisIngenia01/anat/sub-vuiisIngenia01_flip-2_mt-off_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-vuiisIngenia01/anat/sub-vuiisIngenia01_flip-2_mt-off_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:37:03" + "Date": "2022-10-22 14:37:03", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-vuiisIngenia01/anat/sub-vuiisIngenia01_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-vuiisIngenia01/anat/sub-vuiisIngenia01_space-other_T1w_label-SC_softseg.json index 0fba8397cb..89f0f0d48e 100644 --- a/derivatives/labels_softseg/sub-vuiisIngenia01/anat/sub-vuiisIngenia01_space-other_T1w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-vuiisIngenia01/anat/sub-vuiisIngenia01_space-other_T1w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:37:04" + "Date": "2022-10-22 14:37:04", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-vuiisIngenia01/anat/sub-vuiisIngenia01_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-vuiisIngenia01/anat/sub-vuiisIngenia01_space-other_T2star_label-SC_softseg.json index 0fba8397cb..8f988385da 100644 --- a/derivatives/labels_softseg/sub-vuiisIngenia01/anat/sub-vuiisIngenia01_space-other_T2star_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-vuiisIngenia01/anat/sub-vuiisIngenia01_space-other_T2star_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:37:04" + "Date": "2022-10-22 14:37:04", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-vuiisIngenia01/anat/sub-vuiisIngenia01_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-vuiisIngenia01/anat/sub-vuiisIngenia01_space-other_T2w_label-SC_softseg.json index 0fba8397cb..1237335345 100644 --- a/derivatives/labels_softseg/sub-vuiisIngenia01/anat/sub-vuiisIngenia01_space-other_T2w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-vuiisIngenia01/anat/sub-vuiisIngenia01_space-other_T2w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:37:04" + "Date": "2022-10-22 14:37:04", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-vuiisIngenia02/anat/sub-vuiisIngenia02_flip-1_mt-on_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-vuiisIngenia02/anat/sub-vuiisIngenia02_flip-1_mt-on_space-other_MTS_label-SC_softseg.json index 0fba8397cb..6823e6c48b 100644 --- a/derivatives/labels_softseg/sub-vuiisIngenia02/anat/sub-vuiisIngenia02_flip-1_mt-on_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-vuiisIngenia02/anat/sub-vuiisIngenia02_flip-1_mt-on_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:37:04" + "Date": "2022-10-22 14:37:04", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-vuiisIngenia02/anat/sub-vuiisIngenia02_flip-2_mt-off_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-vuiisIngenia02/anat/sub-vuiisIngenia02_flip-2_mt-off_space-other_MTS_label-SC_softseg.json index 0fba8397cb..6823e6c48b 100644 --- a/derivatives/labels_softseg/sub-vuiisIngenia02/anat/sub-vuiisIngenia02_flip-2_mt-off_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-vuiisIngenia02/anat/sub-vuiisIngenia02_flip-2_mt-off_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:37:04" + "Date": "2022-10-22 14:37:04", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-vuiisIngenia02/anat/sub-vuiisIngenia02_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-vuiisIngenia02/anat/sub-vuiisIngenia02_space-other_T1w_label-SC_softseg.json index 0fba8397cb..89f0f0d48e 100644 --- a/derivatives/labels_softseg/sub-vuiisIngenia02/anat/sub-vuiisIngenia02_space-other_T1w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-vuiisIngenia02/anat/sub-vuiisIngenia02_space-other_T1w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:37:04" + "Date": "2022-10-22 14:37:04", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-vuiisIngenia02/anat/sub-vuiisIngenia02_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-vuiisIngenia02/anat/sub-vuiisIngenia02_space-other_T2star_label-SC_softseg.json index 0fba8397cb..8f988385da 100644 --- a/derivatives/labels_softseg/sub-vuiisIngenia02/anat/sub-vuiisIngenia02_space-other_T2star_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-vuiisIngenia02/anat/sub-vuiisIngenia02_space-other_T2star_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:37:04" + "Date": "2022-10-22 14:37:04", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-vuiisIngenia02/anat/sub-vuiisIngenia02_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-vuiisIngenia02/anat/sub-vuiisIngenia02_space-other_T2w_label-SC_softseg.json index 0fba8397cb..1237335345 100644 --- a/derivatives/labels_softseg/sub-vuiisIngenia02/anat/sub-vuiisIngenia02_space-other_T2w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-vuiisIngenia02/anat/sub-vuiisIngenia02_space-other_T2w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:37:04" + "Date": "2022-10-22 14:37:04", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-vuiisIngenia03/anat/sub-vuiisIngenia03_flip-1_mt-on_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-vuiisIngenia03/anat/sub-vuiisIngenia03_flip-1_mt-on_space-other_MTS_label-SC_softseg.json index 0fba8397cb..6823e6c48b 100644 --- a/derivatives/labels_softseg/sub-vuiisIngenia03/anat/sub-vuiisIngenia03_flip-1_mt-on_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-vuiisIngenia03/anat/sub-vuiisIngenia03_flip-1_mt-on_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:37:04" + "Date": "2022-10-22 14:37:04", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-vuiisIngenia03/anat/sub-vuiisIngenia03_flip-2_mt-off_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-vuiisIngenia03/anat/sub-vuiisIngenia03_flip-2_mt-off_space-other_MTS_label-SC_softseg.json index 0fba8397cb..6823e6c48b 100644 --- a/derivatives/labels_softseg/sub-vuiisIngenia03/anat/sub-vuiisIngenia03_flip-2_mt-off_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-vuiisIngenia03/anat/sub-vuiisIngenia03_flip-2_mt-off_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:37:04" + "Date": "2022-10-22 14:37:04", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-vuiisIngenia03/anat/sub-vuiisIngenia03_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-vuiisIngenia03/anat/sub-vuiisIngenia03_space-other_T1w_label-SC_softseg.json index 0fba8397cb..89f0f0d48e 100644 --- a/derivatives/labels_softseg/sub-vuiisIngenia03/anat/sub-vuiisIngenia03_space-other_T1w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-vuiisIngenia03/anat/sub-vuiisIngenia03_space-other_T1w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:37:04" + "Date": "2022-10-22 14:37:04", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-vuiisIngenia03/anat/sub-vuiisIngenia03_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-vuiisIngenia03/anat/sub-vuiisIngenia03_space-other_T2star_label-SC_softseg.json index 0fba8397cb..8f988385da 100644 --- a/derivatives/labels_softseg/sub-vuiisIngenia03/anat/sub-vuiisIngenia03_space-other_T2star_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-vuiisIngenia03/anat/sub-vuiisIngenia03_space-other_T2star_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:37:04" + "Date": "2022-10-22 14:37:04", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-vuiisIngenia03/anat/sub-vuiisIngenia03_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-vuiisIngenia03/anat/sub-vuiisIngenia03_space-other_T2w_label-SC_softseg.json index 0fba8397cb..1237335345 100644 --- a/derivatives/labels_softseg/sub-vuiisIngenia03/anat/sub-vuiisIngenia03_space-other_T2w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-vuiisIngenia03/anat/sub-vuiisIngenia03_space-other_T2w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:37:04" + "Date": "2022-10-22 14:37:04", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-vuiisIngenia04/anat/sub-vuiisIngenia04_flip-1_mt-on_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-vuiisIngenia04/anat/sub-vuiisIngenia04_flip-1_mt-on_space-other_MTS_label-SC_softseg.json index 0fba8397cb..6823e6c48b 100644 --- a/derivatives/labels_softseg/sub-vuiisIngenia04/anat/sub-vuiisIngenia04_flip-1_mt-on_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-vuiisIngenia04/anat/sub-vuiisIngenia04_flip-1_mt-on_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:37:04" + "Date": "2022-10-22 14:37:04", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-vuiisIngenia04/anat/sub-vuiisIngenia04_flip-2_mt-off_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-vuiisIngenia04/anat/sub-vuiisIngenia04_flip-2_mt-off_space-other_MTS_label-SC_softseg.json index 0fba8397cb..6823e6c48b 100644 --- a/derivatives/labels_softseg/sub-vuiisIngenia04/anat/sub-vuiisIngenia04_flip-2_mt-off_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-vuiisIngenia04/anat/sub-vuiisIngenia04_flip-2_mt-off_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:37:04" + "Date": "2022-10-22 14:37:04", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-vuiisIngenia04/anat/sub-vuiisIngenia04_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-vuiisIngenia04/anat/sub-vuiisIngenia04_space-other_T1w_label-SC_softseg.json index 0fba8397cb..89f0f0d48e 100644 --- a/derivatives/labels_softseg/sub-vuiisIngenia04/anat/sub-vuiisIngenia04_space-other_T1w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-vuiisIngenia04/anat/sub-vuiisIngenia04_space-other_T1w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:37:04" + "Date": "2022-10-22 14:37:04", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-vuiisIngenia04/anat/sub-vuiisIngenia04_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-vuiisIngenia04/anat/sub-vuiisIngenia04_space-other_T2star_label-SC_softseg.json index 0fba8397cb..8f988385da 100644 --- a/derivatives/labels_softseg/sub-vuiisIngenia04/anat/sub-vuiisIngenia04_space-other_T2star_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-vuiisIngenia04/anat/sub-vuiisIngenia04_space-other_T2star_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:37:04" + "Date": "2022-10-22 14:37:04", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-vuiisIngenia04/anat/sub-vuiisIngenia04_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-vuiisIngenia04/anat/sub-vuiisIngenia04_space-other_T2w_label-SC_softseg.json index 0fba8397cb..1237335345 100644 --- a/derivatives/labels_softseg/sub-vuiisIngenia04/anat/sub-vuiisIngenia04_space-other_T2w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-vuiisIngenia04/anat/sub-vuiisIngenia04_space-other_T2w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:37:04" + "Date": "2022-10-22 14:37:04", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-vuiisIngenia05/anat/sub-vuiisIngenia05_flip-1_mt-on_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-vuiisIngenia05/anat/sub-vuiisIngenia05_flip-1_mt-on_space-other_MTS_label-SC_softseg.json index 0fba8397cb..6823e6c48b 100644 --- a/derivatives/labels_softseg/sub-vuiisIngenia05/anat/sub-vuiisIngenia05_flip-1_mt-on_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-vuiisIngenia05/anat/sub-vuiisIngenia05_flip-1_mt-on_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:37:04" + "Date": "2022-10-22 14:37:04", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-vuiisIngenia05/anat/sub-vuiisIngenia05_flip-2_mt-off_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-vuiisIngenia05/anat/sub-vuiisIngenia05_flip-2_mt-off_space-other_MTS_label-SC_softseg.json index 0fba8397cb..6823e6c48b 100644 --- a/derivatives/labels_softseg/sub-vuiisIngenia05/anat/sub-vuiisIngenia05_flip-2_mt-off_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-vuiisIngenia05/anat/sub-vuiisIngenia05_flip-2_mt-off_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:37:04" + "Date": "2022-10-22 14:37:04", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-vuiisIngenia05/anat/sub-vuiisIngenia05_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-vuiisIngenia05/anat/sub-vuiisIngenia05_space-other_T1w_label-SC_softseg.json index 8c4ed7b180..7646dd501d 100644 --- a/derivatives/labels_softseg/sub-vuiisIngenia05/anat/sub-vuiisIngenia05_space-other_T1w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-vuiisIngenia05/anat/sub-vuiisIngenia05_space-other_T1w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:37:05" + "Date": "2022-10-22 14:37:05", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-vuiisIngenia05/anat/sub-vuiisIngenia05_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-vuiisIngenia05/anat/sub-vuiisIngenia05_space-other_T2star_label-SC_softseg.json index 8c4ed7b180..f106b68fac 100644 --- a/derivatives/labels_softseg/sub-vuiisIngenia05/anat/sub-vuiisIngenia05_space-other_T2star_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-vuiisIngenia05/anat/sub-vuiisIngenia05_space-other_T2star_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:37:05" + "Date": "2022-10-22 14:37:05", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-vuiisIngenia05/anat/sub-vuiisIngenia05_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-vuiisIngenia05/anat/sub-vuiisIngenia05_space-other_T2w_label-SC_softseg.json index 8c4ed7b180..eaf03bec4c 100644 --- a/derivatives/labels_softseg/sub-vuiisIngenia05/anat/sub-vuiisIngenia05_space-other_T2w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-vuiisIngenia05/anat/sub-vuiisIngenia05_space-other_T2w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:37:05" + "Date": "2022-10-22 14:37:05", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-vuiisIngenia06/anat/sub-vuiisIngenia06_flip-1_mt-on_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-vuiisIngenia06/anat/sub-vuiisIngenia06_flip-1_mt-on_space-other_MTS_label-SC_softseg.json index 8c4ed7b180..3ed004d900 100644 --- a/derivatives/labels_softseg/sub-vuiisIngenia06/anat/sub-vuiisIngenia06_flip-1_mt-on_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-vuiisIngenia06/anat/sub-vuiisIngenia06_flip-1_mt-on_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:37:05" + "Date": "2022-10-22 14:37:05", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-vuiisIngenia06/anat/sub-vuiisIngenia06_flip-2_mt-off_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-vuiisIngenia06/anat/sub-vuiisIngenia06_flip-2_mt-off_space-other_MTS_label-SC_softseg.json index 8c4ed7b180..3ed004d900 100644 --- a/derivatives/labels_softseg/sub-vuiisIngenia06/anat/sub-vuiisIngenia06_flip-2_mt-off_space-other_MTS_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-vuiisIngenia06/anat/sub-vuiisIngenia06_flip-2_mt-off_space-other_MTS_label-SC_softseg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:37:05" + "Date": "2022-10-22 14:37:05", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-vuiisIngenia06/anat/sub-vuiisIngenia06_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-vuiisIngenia06/anat/sub-vuiisIngenia06_space-other_T1w_label-SC_softseg.json index 8c4ed7b180..7646dd501d 100644 --- a/derivatives/labels_softseg/sub-vuiisIngenia06/anat/sub-vuiisIngenia06_space-other_T1w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-vuiisIngenia06/anat/sub-vuiisIngenia06_space-other_T1w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:37:05" + "Date": "2022-10-22 14:37:05", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-vuiisIngenia06/anat/sub-vuiisIngenia06_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-vuiisIngenia06/anat/sub-vuiisIngenia06_space-other_T2star_label-SC_softseg.json index 8c4ed7b180..f106b68fac 100644 --- a/derivatives/labels_softseg/sub-vuiisIngenia06/anat/sub-vuiisIngenia06_space-other_T2star_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-vuiisIngenia06/anat/sub-vuiisIngenia06_space-other_T2star_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:37:05" + "Date": "2022-10-22 14:37:05", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-vuiisIngenia06/anat/sub-vuiisIngenia06_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-vuiisIngenia06/anat/sub-vuiisIngenia06_space-other_T2w_label-SC_softseg.json index 8c4ed7b180..eaf03bec4c 100644 --- a/derivatives/labels_softseg/sub-vuiisIngenia06/anat/sub-vuiisIngenia06_space-other_T2w_label-SC_softseg.json +++ b/derivatives/labels_softseg/sub-vuiisIngenia06/anat/sub-vuiisIngenia06_space-other_T2w_label-SC_softseg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:37:05" + "Date": "2022-10-22 14:37:05", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-amu01/anat/sub-amu01_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-amu01/anat/sub-amu01_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json index 8190f8bf00..05e09500c1 100644 --- a/derivatives/labels_softseg_bin/sub-amu01/anat/sub-amu01_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-amu01/anat/sub-amu01_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:35:59" + "Date": "2022-10-22 14:35:59", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-amu01/anat/sub-amu01_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-amu01/anat/sub-amu01_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json index 8190f8bf00..05e09500c1 100644 --- a/derivatives/labels_softseg_bin/sub-amu01/anat/sub-amu01_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-amu01/anat/sub-amu01_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:35:59" + "Date": "2022-10-22 14:35:59", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-amu01/anat/sub-amu01_space-other_T1w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-amu01/anat/sub-amu01_space-other_T1w_desc-softseg_label-SC_seg.json index 8190f8bf00..e3b901fc65 100644 --- a/derivatives/labels_softseg_bin/sub-amu01/anat/sub-amu01_space-other_T1w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-amu01/anat/sub-amu01_space-other_T1w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:35:59" + "Date": "2022-10-22 14:35:59", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-amu01/anat/sub-amu01_space-other_T2star_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-amu01/anat/sub-amu01_space-other_T2star_desc-softseg_label-SC_seg.json index 8190f8bf00..517f317a87 100644 --- a/derivatives/labels_softseg_bin/sub-amu01/anat/sub-amu01_space-other_T2star_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-amu01/anat/sub-amu01_space-other_T2star_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:35:59" + "Date": "2022-10-22 14:35:59", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-amu01/anat/sub-amu01_space-other_T2w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-amu01/anat/sub-amu01_space-other_T2w_desc-softseg_label-SC_seg.json index 8190f8bf00..8377974b6f 100644 --- a/derivatives/labels_softseg_bin/sub-amu01/anat/sub-amu01_space-other_T2w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-amu01/anat/sub-amu01_space-other_T2w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:35:59" + "Date": "2022-10-22 14:35:59", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-amu02/anat/sub-amu02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-amu02/anat/sub-amu02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json index 8190f8bf00..05e09500c1 100644 --- a/derivatives/labels_softseg_bin/sub-amu02/anat/sub-amu02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-amu02/anat/sub-amu02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:35:59" + "Date": "2022-10-22 14:35:59", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-amu02/anat/sub-amu02_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-amu02/anat/sub-amu02_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json index 8190f8bf00..05e09500c1 100644 --- a/derivatives/labels_softseg_bin/sub-amu02/anat/sub-amu02_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-amu02/anat/sub-amu02_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:35:59" + "Date": "2022-10-22 14:35:59", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-amu02/anat/sub-amu02_space-other_T1w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-amu02/anat/sub-amu02_space-other_T1w_desc-softseg_label-SC_seg.json index 8190f8bf00..e3b901fc65 100644 --- a/derivatives/labels_softseg_bin/sub-amu02/anat/sub-amu02_space-other_T1w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-amu02/anat/sub-amu02_space-other_T1w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:35:59" + "Date": "2022-10-22 14:35:59", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-amu02/anat/sub-amu02_space-other_T2star_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-amu02/anat/sub-amu02_space-other_T2star_desc-softseg_label-SC_seg.json index 8190f8bf00..517f317a87 100644 --- a/derivatives/labels_softseg_bin/sub-amu02/anat/sub-amu02_space-other_T2star_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-amu02/anat/sub-amu02_space-other_T2star_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:35:59" + "Date": "2022-10-22 14:35:59", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-amu02/anat/sub-amu02_space-other_T2w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-amu02/anat/sub-amu02_space-other_T2w_desc-softseg_label-SC_seg.json index 8190f8bf00..8377974b6f 100644 --- a/derivatives/labels_softseg_bin/sub-amu02/anat/sub-amu02_space-other_T2w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-amu02/anat/sub-amu02_space-other_T2w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:35:59" + "Date": "2022-10-22 14:35:59", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-amu03/anat/sub-amu03_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-amu03/anat/sub-amu03_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json index 8190f8bf00..05e09500c1 100644 --- a/derivatives/labels_softseg_bin/sub-amu03/anat/sub-amu03_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-amu03/anat/sub-amu03_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:35:59" + "Date": "2022-10-22 14:35:59", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-amu03/anat/sub-amu03_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-amu03/anat/sub-amu03_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json index 8190f8bf00..05e09500c1 100644 --- a/derivatives/labels_softseg_bin/sub-amu03/anat/sub-amu03_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-amu03/anat/sub-amu03_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:35:59" + "Date": "2022-10-22 14:35:59", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-amu03/anat/sub-amu03_space-other_T1w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-amu03/anat/sub-amu03_space-other_T1w_desc-softseg_label-SC_seg.json index 8190f8bf00..e3b901fc65 100644 --- a/derivatives/labels_softseg_bin/sub-amu03/anat/sub-amu03_space-other_T1w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-amu03/anat/sub-amu03_space-other_T1w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:35:59" + "Date": "2022-10-22 14:35:59", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-amu03/anat/sub-amu03_space-other_T2star_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-amu03/anat/sub-amu03_space-other_T2star_desc-softseg_label-SC_seg.json index 8190f8bf00..517f317a87 100644 --- a/derivatives/labels_softseg_bin/sub-amu03/anat/sub-amu03_space-other_T2star_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-amu03/anat/sub-amu03_space-other_T2star_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:35:59" + "Date": "2022-10-22 14:35:59", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-amu03/anat/sub-amu03_space-other_T2w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-amu03/anat/sub-amu03_space-other_T2w_desc-softseg_label-SC_seg.json index 8190f8bf00..8377974b6f 100644 --- a/derivatives/labels_softseg_bin/sub-amu03/anat/sub-amu03_space-other_T2w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-amu03/anat/sub-amu03_space-other_T2w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:35:59" + "Date": "2022-10-22 14:35:59", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-amu04/anat/sub-amu04_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-amu04/anat/sub-amu04_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json index 8190f8bf00..05e09500c1 100644 --- a/derivatives/labels_softseg_bin/sub-amu04/anat/sub-amu04_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-amu04/anat/sub-amu04_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:35:59" + "Date": "2022-10-22 14:35:59", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-amu04/anat/sub-amu04_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-amu04/anat/sub-amu04_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json index 8190f8bf00..05e09500c1 100644 --- a/derivatives/labels_softseg_bin/sub-amu04/anat/sub-amu04_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-amu04/anat/sub-amu04_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:35:59" + "Date": "2022-10-22 14:35:59", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-amu04/anat/sub-amu04_space-other_T1w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-amu04/anat/sub-amu04_space-other_T1w_desc-softseg_label-SC_seg.json index 8190f8bf00..e3b901fc65 100644 --- a/derivatives/labels_softseg_bin/sub-amu04/anat/sub-amu04_space-other_T1w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-amu04/anat/sub-amu04_space-other_T1w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:35:59" + "Date": "2022-10-22 14:35:59", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-amu04/anat/sub-amu04_space-other_T2star_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-amu04/anat/sub-amu04_space-other_T2star_desc-softseg_label-SC_seg.json index 8190f8bf00..517f317a87 100644 --- a/derivatives/labels_softseg_bin/sub-amu04/anat/sub-amu04_space-other_T2star_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-amu04/anat/sub-amu04_space-other_T2star_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:35:59" + "Date": "2022-10-22 14:35:59", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-amu04/anat/sub-amu04_space-other_T2w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-amu04/anat/sub-amu04_space-other_T2w_desc-softseg_label-SC_seg.json index 19fed7e193..873b44b59d 100644 --- a/derivatives/labels_softseg_bin/sub-amu04/anat/sub-amu04_space-other_T2w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-amu04/anat/sub-amu04_space-other_T2w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:00" + "Date": "2022-10-22 14:36:00", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-amu05/anat/sub-amu05_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-amu05/anat/sub-amu05_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json index 19fed7e193..0aa8f7ebad 100644 --- a/derivatives/labels_softseg_bin/sub-amu05/anat/sub-amu05_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-amu05/anat/sub-amu05_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:00" + "Date": "2022-10-22 14:36:00", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-amu05/anat/sub-amu05_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-amu05/anat/sub-amu05_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json index 19fed7e193..0aa8f7ebad 100644 --- a/derivatives/labels_softseg_bin/sub-amu05/anat/sub-amu05_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-amu05/anat/sub-amu05_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:00" + "Date": "2022-10-22 14:36:00", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-amu05/anat/sub-amu05_space-other_T1w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-amu05/anat/sub-amu05_space-other_T1w_desc-softseg_label-SC_seg.json index 19fed7e193..82ca064032 100644 --- a/derivatives/labels_softseg_bin/sub-amu05/anat/sub-amu05_space-other_T1w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-amu05/anat/sub-amu05_space-other_T1w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:00" + "Date": "2022-10-22 14:36:00", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-amu05/anat/sub-amu05_space-other_T2star_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-amu05/anat/sub-amu05_space-other_T2star_desc-softseg_label-SC_seg.json index 19fed7e193..70cd26abf6 100644 --- a/derivatives/labels_softseg_bin/sub-amu05/anat/sub-amu05_space-other_T2star_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-amu05/anat/sub-amu05_space-other_T2star_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:00" + "Date": "2022-10-22 14:36:00", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-amu05/anat/sub-amu05_space-other_T2w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-amu05/anat/sub-amu05_space-other_T2w_desc-softseg_label-SC_seg.json index 19fed7e193..873b44b59d 100644 --- a/derivatives/labels_softseg_bin/sub-amu05/anat/sub-amu05_space-other_T2w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-amu05/anat/sub-amu05_space-other_T2w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:00" + "Date": "2022-10-22 14:36:00", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-balgrist01/anat/sub-balgrist01_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-balgrist01/anat/sub-balgrist01_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json index 19fed7e193..0aa8f7ebad 100644 --- a/derivatives/labels_softseg_bin/sub-balgrist01/anat/sub-balgrist01_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-balgrist01/anat/sub-balgrist01_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:00" + "Date": "2022-10-22 14:36:00", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-balgrist01/anat/sub-balgrist01_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-balgrist01/anat/sub-balgrist01_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json index 19fed7e193..0aa8f7ebad 100644 --- a/derivatives/labels_softseg_bin/sub-balgrist01/anat/sub-balgrist01_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-balgrist01/anat/sub-balgrist01_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:00" + "Date": "2022-10-22 14:36:00", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-balgrist01/anat/sub-balgrist01_space-other_T1w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-balgrist01/anat/sub-balgrist01_space-other_T1w_desc-softseg_label-SC_seg.json index 19fed7e193..82ca064032 100644 --- a/derivatives/labels_softseg_bin/sub-balgrist01/anat/sub-balgrist01_space-other_T1w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-balgrist01/anat/sub-balgrist01_space-other_T1w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:00" + "Date": "2022-10-22 14:36:00", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-balgrist01/anat/sub-balgrist01_space-other_T2star_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-balgrist01/anat/sub-balgrist01_space-other_T2star_desc-softseg_label-SC_seg.json index 19fed7e193..70cd26abf6 100644 --- a/derivatives/labels_softseg_bin/sub-balgrist01/anat/sub-balgrist01_space-other_T2star_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-balgrist01/anat/sub-balgrist01_space-other_T2star_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:00" + "Date": "2022-10-22 14:36:00", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-balgrist01/anat/sub-balgrist01_space-other_T2w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-balgrist01/anat/sub-balgrist01_space-other_T2w_desc-softseg_label-SC_seg.json index 19fed7e193..873b44b59d 100644 --- a/derivatives/labels_softseg_bin/sub-balgrist01/anat/sub-balgrist01_space-other_T2w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-balgrist01/anat/sub-balgrist01_space-other_T2w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:00" + "Date": "2022-10-22 14:36:00", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-balgrist02/anat/sub-balgrist02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-balgrist02/anat/sub-balgrist02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json index 19fed7e193..0aa8f7ebad 100644 --- a/derivatives/labels_softseg_bin/sub-balgrist02/anat/sub-balgrist02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-balgrist02/anat/sub-balgrist02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:00" + "Date": "2022-10-22 14:36:00", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-balgrist02/anat/sub-balgrist02_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-balgrist02/anat/sub-balgrist02_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json index 19fed7e193..0aa8f7ebad 100644 --- a/derivatives/labels_softseg_bin/sub-balgrist02/anat/sub-balgrist02_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-balgrist02/anat/sub-balgrist02_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:00" + "Date": "2022-10-22 14:36:00", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-balgrist02/anat/sub-balgrist02_space-other_T1w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-balgrist02/anat/sub-balgrist02_space-other_T1w_desc-softseg_label-SC_seg.json index 19fed7e193..82ca064032 100644 --- a/derivatives/labels_softseg_bin/sub-balgrist02/anat/sub-balgrist02_space-other_T1w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-balgrist02/anat/sub-balgrist02_space-other_T1w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:00" + "Date": "2022-10-22 14:36:00", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-balgrist02/anat/sub-balgrist02_space-other_T2star_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-balgrist02/anat/sub-balgrist02_space-other_T2star_desc-softseg_label-SC_seg.json index 19fed7e193..70cd26abf6 100644 --- a/derivatives/labels_softseg_bin/sub-balgrist02/anat/sub-balgrist02_space-other_T2star_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-balgrist02/anat/sub-balgrist02_space-other_T2star_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:00" + "Date": "2022-10-22 14:36:00", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-balgrist02/anat/sub-balgrist02_space-other_T2w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-balgrist02/anat/sub-balgrist02_space-other_T2w_desc-softseg_label-SC_seg.json index 19fed7e193..873b44b59d 100644 --- a/derivatives/labels_softseg_bin/sub-balgrist02/anat/sub-balgrist02_space-other_T2w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-balgrist02/anat/sub-balgrist02_space-other_T2w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:00" + "Date": "2022-10-22 14:36:00", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-balgrist03/anat/sub-balgrist03_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-balgrist03/anat/sub-balgrist03_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json index 19fed7e193..0aa8f7ebad 100644 --- a/derivatives/labels_softseg_bin/sub-balgrist03/anat/sub-balgrist03_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-balgrist03/anat/sub-balgrist03_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:00" + "Date": "2022-10-22 14:36:00", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-balgrist03/anat/sub-balgrist03_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-balgrist03/anat/sub-balgrist03_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json index 19fed7e193..0aa8f7ebad 100644 --- a/derivatives/labels_softseg_bin/sub-balgrist03/anat/sub-balgrist03_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-balgrist03/anat/sub-balgrist03_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:00" + "Date": "2022-10-22 14:36:00", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-balgrist03/anat/sub-balgrist03_space-other_T1w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-balgrist03/anat/sub-balgrist03_space-other_T1w_desc-softseg_label-SC_seg.json index 19fed7e193..82ca064032 100644 --- a/derivatives/labels_softseg_bin/sub-balgrist03/anat/sub-balgrist03_space-other_T1w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-balgrist03/anat/sub-balgrist03_space-other_T1w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:00" + "Date": "2022-10-22 14:36:00", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-balgrist03/anat/sub-balgrist03_space-other_T2star_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-balgrist03/anat/sub-balgrist03_space-other_T2star_desc-softseg_label-SC_seg.json index 19fed7e193..70cd26abf6 100644 --- a/derivatives/labels_softseg_bin/sub-balgrist03/anat/sub-balgrist03_space-other_T2star_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-balgrist03/anat/sub-balgrist03_space-other_T2star_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:00" + "Date": "2022-10-22 14:36:00", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-balgrist03/anat/sub-balgrist03_space-other_T2w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-balgrist03/anat/sub-balgrist03_space-other_T2w_desc-softseg_label-SC_seg.json index 6d0515abc8..4153c0f0f0 100644 --- a/derivatives/labels_softseg_bin/sub-balgrist03/anat/sub-balgrist03_space-other_T2w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-balgrist03/anat/sub-balgrist03_space-other_T2w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:01" + "Date": "2022-10-22 14:36:01", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-balgrist04/anat/sub-balgrist04_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-balgrist04/anat/sub-balgrist04_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json index 6d0515abc8..e3147c3d95 100644 --- a/derivatives/labels_softseg_bin/sub-balgrist04/anat/sub-balgrist04_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-balgrist04/anat/sub-balgrist04_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:01" + "Date": "2022-10-22 14:36:01", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-balgrist04/anat/sub-balgrist04_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-balgrist04/anat/sub-balgrist04_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json index 6d0515abc8..e3147c3d95 100644 --- a/derivatives/labels_softseg_bin/sub-balgrist04/anat/sub-balgrist04_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-balgrist04/anat/sub-balgrist04_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:01" + "Date": "2022-10-22 14:36:01", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-balgrist04/anat/sub-balgrist04_space-other_T1w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-balgrist04/anat/sub-balgrist04_space-other_T1w_desc-softseg_label-SC_seg.json index 6d0515abc8..b726e941ea 100644 --- a/derivatives/labels_softseg_bin/sub-balgrist04/anat/sub-balgrist04_space-other_T1w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-balgrist04/anat/sub-balgrist04_space-other_T1w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:01" + "Date": "2022-10-22 14:36:01", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-balgrist04/anat/sub-balgrist04_space-other_T2star_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-balgrist04/anat/sub-balgrist04_space-other_T2star_desc-softseg_label-SC_seg.json index 6d0515abc8..06335586a9 100644 --- a/derivatives/labels_softseg_bin/sub-balgrist04/anat/sub-balgrist04_space-other_T2star_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-balgrist04/anat/sub-balgrist04_space-other_T2star_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:01" + "Date": "2022-10-22 14:36:01", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-balgrist04/anat/sub-balgrist04_space-other_T2w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-balgrist04/anat/sub-balgrist04_space-other_T2w_desc-softseg_label-SC_seg.json index 6d0515abc8..4153c0f0f0 100644 --- a/derivatives/labels_softseg_bin/sub-balgrist04/anat/sub-balgrist04_space-other_T2w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-balgrist04/anat/sub-balgrist04_space-other_T2w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:01" + "Date": "2022-10-22 14:36:01", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-balgrist05/anat/sub-balgrist05_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-balgrist05/anat/sub-balgrist05_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json index 6d0515abc8..e3147c3d95 100644 --- a/derivatives/labels_softseg_bin/sub-balgrist05/anat/sub-balgrist05_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-balgrist05/anat/sub-balgrist05_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:01" + "Date": "2022-10-22 14:36:01", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-balgrist05/anat/sub-balgrist05_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-balgrist05/anat/sub-balgrist05_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json index 6d0515abc8..e3147c3d95 100644 --- a/derivatives/labels_softseg_bin/sub-balgrist05/anat/sub-balgrist05_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-balgrist05/anat/sub-balgrist05_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:01" + "Date": "2022-10-22 14:36:01", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-balgrist05/anat/sub-balgrist05_space-other_T1w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-balgrist05/anat/sub-balgrist05_space-other_T1w_desc-softseg_label-SC_seg.json index 6d0515abc8..b726e941ea 100644 --- a/derivatives/labels_softseg_bin/sub-balgrist05/anat/sub-balgrist05_space-other_T1w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-balgrist05/anat/sub-balgrist05_space-other_T1w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:01" + "Date": "2022-10-22 14:36:01", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-balgrist05/anat/sub-balgrist05_space-other_T2star_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-balgrist05/anat/sub-balgrist05_space-other_T2star_desc-softseg_label-SC_seg.json index 6d0515abc8..06335586a9 100644 --- a/derivatives/labels_softseg_bin/sub-balgrist05/anat/sub-balgrist05_space-other_T2star_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-balgrist05/anat/sub-balgrist05_space-other_T2star_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:01" + "Date": "2022-10-22 14:36:01", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-balgrist05/anat/sub-balgrist05_space-other_T2w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-balgrist05/anat/sub-balgrist05_space-other_T2w_desc-softseg_label-SC_seg.json index 6d0515abc8..4153c0f0f0 100644 --- a/derivatives/labels_softseg_bin/sub-balgrist05/anat/sub-balgrist05_space-other_T2w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-balgrist05/anat/sub-balgrist05_space-other_T2w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:01" + "Date": "2022-10-22 14:36:01", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-balgrist06/anat/sub-balgrist06_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-balgrist06/anat/sub-balgrist06_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json index 6d0515abc8..e3147c3d95 100644 --- a/derivatives/labels_softseg_bin/sub-balgrist06/anat/sub-balgrist06_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-balgrist06/anat/sub-balgrist06_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:01" + "Date": "2022-10-22 14:36:01", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-balgrist06/anat/sub-balgrist06_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-balgrist06/anat/sub-balgrist06_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json index 6d0515abc8..e3147c3d95 100644 --- a/derivatives/labels_softseg_bin/sub-balgrist06/anat/sub-balgrist06_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-balgrist06/anat/sub-balgrist06_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:01" + "Date": "2022-10-22 14:36:01", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-balgrist06/anat/sub-balgrist06_space-other_T1w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-balgrist06/anat/sub-balgrist06_space-other_T1w_desc-softseg_label-SC_seg.json index 6d0515abc8..b726e941ea 100644 --- a/derivatives/labels_softseg_bin/sub-balgrist06/anat/sub-balgrist06_space-other_T1w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-balgrist06/anat/sub-balgrist06_space-other_T1w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:01" + "Date": "2022-10-22 14:36:01", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-balgrist06/anat/sub-balgrist06_space-other_T2star_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-balgrist06/anat/sub-balgrist06_space-other_T2star_desc-softseg_label-SC_seg.json index 6d0515abc8..06335586a9 100644 --- a/derivatives/labels_softseg_bin/sub-balgrist06/anat/sub-balgrist06_space-other_T2star_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-balgrist06/anat/sub-balgrist06_space-other_T2star_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:01" + "Date": "2022-10-22 14:36:01", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-balgrist06/anat/sub-balgrist06_space-other_T2w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-balgrist06/anat/sub-balgrist06_space-other_T2w_desc-softseg_label-SC_seg.json index 6d0515abc8..4153c0f0f0 100644 --- a/derivatives/labels_softseg_bin/sub-balgrist06/anat/sub-balgrist06_space-other_T2w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-balgrist06/anat/sub-balgrist06_space-other_T2w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:01" + "Date": "2022-10-22 14:36:01", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-barcelona01/anat/sub-barcelona01_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-barcelona01/anat/sub-barcelona01_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json index b87a891800..204635e79f 100644 --- a/derivatives/labels_softseg_bin/sub-barcelona01/anat/sub-barcelona01_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-barcelona01/anat/sub-barcelona01_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:02" + "Date": "2022-10-22 14:36:02", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-barcelona01/anat/sub-barcelona01_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-barcelona01/anat/sub-barcelona01_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json index b87a891800..204635e79f 100644 --- a/derivatives/labels_softseg_bin/sub-barcelona01/anat/sub-barcelona01_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-barcelona01/anat/sub-barcelona01_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:02" + "Date": "2022-10-22 14:36:02", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-barcelona01/anat/sub-barcelona01_space-other_T1w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-barcelona01/anat/sub-barcelona01_space-other_T1w_desc-softseg_label-SC_seg.json index b87a891800..81390240d3 100644 --- a/derivatives/labels_softseg_bin/sub-barcelona01/anat/sub-barcelona01_space-other_T1w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-barcelona01/anat/sub-barcelona01_space-other_T1w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:02" + "Date": "2022-10-22 14:36:02", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-barcelona01/anat/sub-barcelona01_space-other_T2star_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-barcelona01/anat/sub-barcelona01_space-other_T2star_desc-softseg_label-SC_seg.json index b87a891800..aec905b363 100644 --- a/derivatives/labels_softseg_bin/sub-barcelona01/anat/sub-barcelona01_space-other_T2star_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-barcelona01/anat/sub-barcelona01_space-other_T2star_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:02" + "Date": "2022-10-22 14:36:02", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-barcelona01/anat/sub-barcelona01_space-other_T2w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-barcelona01/anat/sub-barcelona01_space-other_T2w_desc-softseg_label-SC_seg.json index b87a891800..c5f83524c8 100644 --- a/derivatives/labels_softseg_bin/sub-barcelona01/anat/sub-barcelona01_space-other_T2w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-barcelona01/anat/sub-barcelona01_space-other_T2w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:02" + "Date": "2022-10-22 14:36:02", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-barcelona02/anat/sub-barcelona02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-barcelona02/anat/sub-barcelona02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json index b87a891800..204635e79f 100644 --- a/derivatives/labels_softseg_bin/sub-barcelona02/anat/sub-barcelona02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-barcelona02/anat/sub-barcelona02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:02" + "Date": "2022-10-22 14:36:02", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-barcelona02/anat/sub-barcelona02_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-barcelona02/anat/sub-barcelona02_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json index b87a891800..204635e79f 100644 --- a/derivatives/labels_softseg_bin/sub-barcelona02/anat/sub-barcelona02_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-barcelona02/anat/sub-barcelona02_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:02" + "Date": "2022-10-22 14:36:02", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-barcelona02/anat/sub-barcelona02_space-other_T1w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-barcelona02/anat/sub-barcelona02_space-other_T1w_desc-softseg_label-SC_seg.json index b87a891800..81390240d3 100644 --- a/derivatives/labels_softseg_bin/sub-barcelona02/anat/sub-barcelona02_space-other_T1w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-barcelona02/anat/sub-barcelona02_space-other_T1w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:02" + "Date": "2022-10-22 14:36:02", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-barcelona02/anat/sub-barcelona02_space-other_T2star_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-barcelona02/anat/sub-barcelona02_space-other_T2star_desc-softseg_label-SC_seg.json index b87a891800..aec905b363 100644 --- a/derivatives/labels_softseg_bin/sub-barcelona02/anat/sub-barcelona02_space-other_T2star_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-barcelona02/anat/sub-barcelona02_space-other_T2star_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:02" + "Date": "2022-10-22 14:36:02", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-barcelona02/anat/sub-barcelona02_space-other_T2w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-barcelona02/anat/sub-barcelona02_space-other_T2w_desc-softseg_label-SC_seg.json index b87a891800..c5f83524c8 100644 --- a/derivatives/labels_softseg_bin/sub-barcelona02/anat/sub-barcelona02_space-other_T2w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-barcelona02/anat/sub-barcelona02_space-other_T2w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:02" + "Date": "2022-10-22 14:36:02", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-barcelona03/anat/sub-barcelona03_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-barcelona03/anat/sub-barcelona03_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json index b87a891800..204635e79f 100644 --- a/derivatives/labels_softseg_bin/sub-barcelona03/anat/sub-barcelona03_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-barcelona03/anat/sub-barcelona03_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:02" + "Date": "2022-10-22 14:36:02", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-barcelona03/anat/sub-barcelona03_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-barcelona03/anat/sub-barcelona03_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json index b87a891800..204635e79f 100644 --- a/derivatives/labels_softseg_bin/sub-barcelona03/anat/sub-barcelona03_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-barcelona03/anat/sub-barcelona03_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:02" + "Date": "2022-10-22 14:36:02", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-barcelona03/anat/sub-barcelona03_space-other_T1w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-barcelona03/anat/sub-barcelona03_space-other_T1w_desc-softseg_label-SC_seg.json index b87a891800..81390240d3 100644 --- a/derivatives/labels_softseg_bin/sub-barcelona03/anat/sub-barcelona03_space-other_T1w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-barcelona03/anat/sub-barcelona03_space-other_T1w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:02" + "Date": "2022-10-22 14:36:02", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-barcelona03/anat/sub-barcelona03_space-other_T2star_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-barcelona03/anat/sub-barcelona03_space-other_T2star_desc-softseg_label-SC_seg.json index b87a891800..aec905b363 100644 --- a/derivatives/labels_softseg_bin/sub-barcelona03/anat/sub-barcelona03_space-other_T2star_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-barcelona03/anat/sub-barcelona03_space-other_T2star_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:02" + "Date": "2022-10-22 14:36:02", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-barcelona03/anat/sub-barcelona03_space-other_T2w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-barcelona03/anat/sub-barcelona03_space-other_T2w_desc-softseg_label-SC_seg.json index b87a891800..c5f83524c8 100644 --- a/derivatives/labels_softseg_bin/sub-barcelona03/anat/sub-barcelona03_space-other_T2w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-barcelona03/anat/sub-barcelona03_space-other_T2w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:02" + "Date": "2022-10-22 14:36:02", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-barcelona04/anat/sub-barcelona04_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-barcelona04/anat/sub-barcelona04_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json index b87a891800..204635e79f 100644 --- a/derivatives/labels_softseg_bin/sub-barcelona04/anat/sub-barcelona04_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-barcelona04/anat/sub-barcelona04_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:02" + "Date": "2022-10-22 14:36:02", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-barcelona04/anat/sub-barcelona04_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-barcelona04/anat/sub-barcelona04_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json index b87a891800..204635e79f 100644 --- a/derivatives/labels_softseg_bin/sub-barcelona04/anat/sub-barcelona04_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-barcelona04/anat/sub-barcelona04_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:02" + "Date": "2022-10-22 14:36:02", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-barcelona04/anat/sub-barcelona04_space-other_T1w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-barcelona04/anat/sub-barcelona04_space-other_T1w_desc-softseg_label-SC_seg.json index b87a891800..81390240d3 100644 --- a/derivatives/labels_softseg_bin/sub-barcelona04/anat/sub-barcelona04_space-other_T1w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-barcelona04/anat/sub-barcelona04_space-other_T1w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:02" + "Date": "2022-10-22 14:36:02", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-barcelona04/anat/sub-barcelona04_space-other_T2star_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-barcelona04/anat/sub-barcelona04_space-other_T2star_desc-softseg_label-SC_seg.json index d1b0b64203..a2a1441fab 100644 --- a/derivatives/labels_softseg_bin/sub-barcelona04/anat/sub-barcelona04_space-other_T2star_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-barcelona04/anat/sub-barcelona04_space-other_T2star_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:03" + "Date": "2022-10-22 14:36:03", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-barcelona04/anat/sub-barcelona04_space-other_T2w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-barcelona04/anat/sub-barcelona04_space-other_T2w_desc-softseg_label-SC_seg.json index d1b0b64203..05d4b3f325 100644 --- a/derivatives/labels_softseg_bin/sub-barcelona04/anat/sub-barcelona04_space-other_T2w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-barcelona04/anat/sub-barcelona04_space-other_T2w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:03" + "Date": "2022-10-22 14:36:03", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-barcelona05/anat/sub-barcelona05_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-barcelona05/anat/sub-barcelona05_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json index d1b0b64203..458073cf27 100644 --- a/derivatives/labels_softseg_bin/sub-barcelona05/anat/sub-barcelona05_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-barcelona05/anat/sub-barcelona05_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:03" + "Date": "2022-10-22 14:36:03", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-barcelona05/anat/sub-barcelona05_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-barcelona05/anat/sub-barcelona05_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json index d1b0b64203..458073cf27 100644 --- a/derivatives/labels_softseg_bin/sub-barcelona05/anat/sub-barcelona05_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-barcelona05/anat/sub-barcelona05_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:03" + "Date": "2022-10-22 14:36:03", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-barcelona05/anat/sub-barcelona05_space-other_T1w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-barcelona05/anat/sub-barcelona05_space-other_T1w_desc-softseg_label-SC_seg.json index d1b0b64203..a2b67812c1 100644 --- a/derivatives/labels_softseg_bin/sub-barcelona05/anat/sub-barcelona05_space-other_T1w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-barcelona05/anat/sub-barcelona05_space-other_T1w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:03" + "Date": "2022-10-22 14:36:03", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-barcelona05/anat/sub-barcelona05_space-other_T2star_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-barcelona05/anat/sub-barcelona05_space-other_T2star_desc-softseg_label-SC_seg.json index d1b0b64203..a2a1441fab 100644 --- a/derivatives/labels_softseg_bin/sub-barcelona05/anat/sub-barcelona05_space-other_T2star_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-barcelona05/anat/sub-barcelona05_space-other_T2star_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:03" + "Date": "2022-10-22 14:36:03", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-barcelona05/anat/sub-barcelona05_space-other_T2w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-barcelona05/anat/sub-barcelona05_space-other_T2w_desc-softseg_label-SC_seg.json index d1b0b64203..05d4b3f325 100644 --- a/derivatives/labels_softseg_bin/sub-barcelona05/anat/sub-barcelona05_space-other_T2w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-barcelona05/anat/sub-barcelona05_space-other_T2w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:03" + "Date": "2022-10-22 14:36:03", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-barcelona06/anat/sub-barcelona06_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-barcelona06/anat/sub-barcelona06_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json index d1b0b64203..458073cf27 100644 --- a/derivatives/labels_softseg_bin/sub-barcelona06/anat/sub-barcelona06_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-barcelona06/anat/sub-barcelona06_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:03" + "Date": "2022-10-22 14:36:03", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-barcelona06/anat/sub-barcelona06_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-barcelona06/anat/sub-barcelona06_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json index d1b0b64203..458073cf27 100644 --- a/derivatives/labels_softseg_bin/sub-barcelona06/anat/sub-barcelona06_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-barcelona06/anat/sub-barcelona06_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:03" + "Date": "2022-10-22 14:36:03", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-barcelona06/anat/sub-barcelona06_space-other_T1w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-barcelona06/anat/sub-barcelona06_space-other_T1w_desc-softseg_label-SC_seg.json index d1b0b64203..a2b67812c1 100644 --- a/derivatives/labels_softseg_bin/sub-barcelona06/anat/sub-barcelona06_space-other_T1w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-barcelona06/anat/sub-barcelona06_space-other_T1w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:03" + "Date": "2022-10-22 14:36:03", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-barcelona06/anat/sub-barcelona06_space-other_T2star_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-barcelona06/anat/sub-barcelona06_space-other_T2star_desc-softseg_label-SC_seg.json index d1b0b64203..a2a1441fab 100644 --- a/derivatives/labels_softseg_bin/sub-barcelona06/anat/sub-barcelona06_space-other_T2star_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-barcelona06/anat/sub-barcelona06_space-other_T2star_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:03" + "Date": "2022-10-22 14:36:03", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-barcelona06/anat/sub-barcelona06_space-other_T2w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-barcelona06/anat/sub-barcelona06_space-other_T2w_desc-softseg_label-SC_seg.json index d1b0b64203..05d4b3f325 100644 --- a/derivatives/labels_softseg_bin/sub-barcelona06/anat/sub-barcelona06_space-other_T2w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-barcelona06/anat/sub-barcelona06_space-other_T2w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:03" + "Date": "2022-10-22 14:36:03", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-beijingPrisma01/anat/sub-beijingPrisma01_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-beijingPrisma01/anat/sub-beijingPrisma01_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json index c0903d718d..b5551129e1 100644 --- a/derivatives/labels_softseg_bin/sub-beijingPrisma01/anat/sub-beijingPrisma01_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-beijingPrisma01/anat/sub-beijingPrisma01_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:04" + "Date": "2022-10-22 14:36:04", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-beijingPrisma01/anat/sub-beijingPrisma01_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-beijingPrisma01/anat/sub-beijingPrisma01_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json index c0903d718d..b5551129e1 100644 --- a/derivatives/labels_softseg_bin/sub-beijingPrisma01/anat/sub-beijingPrisma01_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-beijingPrisma01/anat/sub-beijingPrisma01_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:04" + "Date": "2022-10-22 14:36:04", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-beijingPrisma01/anat/sub-beijingPrisma01_space-other_T1w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-beijingPrisma01/anat/sub-beijingPrisma01_space-other_T1w_desc-softseg_label-SC_seg.json index c0903d718d..7370fccd52 100644 --- a/derivatives/labels_softseg_bin/sub-beijingPrisma01/anat/sub-beijingPrisma01_space-other_T1w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-beijingPrisma01/anat/sub-beijingPrisma01_space-other_T1w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:04" + "Date": "2022-10-22 14:36:04", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-beijingPrisma01/anat/sub-beijingPrisma01_space-other_T2star_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-beijingPrisma01/anat/sub-beijingPrisma01_space-other_T2star_desc-softseg_label-SC_seg.json index c0903d718d..078a8d963d 100644 --- a/derivatives/labels_softseg_bin/sub-beijingPrisma01/anat/sub-beijingPrisma01_space-other_T2star_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-beijingPrisma01/anat/sub-beijingPrisma01_space-other_T2star_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:04" + "Date": "2022-10-22 14:36:04", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-beijingPrisma01/anat/sub-beijingPrisma01_space-other_T2w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-beijingPrisma01/anat/sub-beijingPrisma01_space-other_T2w_desc-softseg_label-SC_seg.json index c0903d718d..c897218fac 100644 --- a/derivatives/labels_softseg_bin/sub-beijingPrisma01/anat/sub-beijingPrisma01_space-other_T2w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-beijingPrisma01/anat/sub-beijingPrisma01_space-other_T2w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:04" + "Date": "2022-10-22 14:36:04", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-beijingPrisma02/anat/sub-beijingPrisma02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-beijingPrisma02/anat/sub-beijingPrisma02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json index c0903d718d..b5551129e1 100644 --- a/derivatives/labels_softseg_bin/sub-beijingPrisma02/anat/sub-beijingPrisma02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-beijingPrisma02/anat/sub-beijingPrisma02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:04" + "Date": "2022-10-22 14:36:04", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-beijingPrisma02/anat/sub-beijingPrisma02_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-beijingPrisma02/anat/sub-beijingPrisma02_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json index c0903d718d..b5551129e1 100644 --- a/derivatives/labels_softseg_bin/sub-beijingPrisma02/anat/sub-beijingPrisma02_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-beijingPrisma02/anat/sub-beijingPrisma02_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:04" + "Date": "2022-10-22 14:36:04", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-beijingPrisma02/anat/sub-beijingPrisma02_space-other_T1w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-beijingPrisma02/anat/sub-beijingPrisma02_space-other_T1w_desc-softseg_label-SC_seg.json index c0903d718d..7370fccd52 100644 --- a/derivatives/labels_softseg_bin/sub-beijingPrisma02/anat/sub-beijingPrisma02_space-other_T1w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-beijingPrisma02/anat/sub-beijingPrisma02_space-other_T1w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:04" + "Date": "2022-10-22 14:36:04", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-beijingPrisma02/anat/sub-beijingPrisma02_space-other_T2star_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-beijingPrisma02/anat/sub-beijingPrisma02_space-other_T2star_desc-softseg_label-SC_seg.json index c0903d718d..078a8d963d 100644 --- a/derivatives/labels_softseg_bin/sub-beijingPrisma02/anat/sub-beijingPrisma02_space-other_T2star_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-beijingPrisma02/anat/sub-beijingPrisma02_space-other_T2star_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:04" + "Date": "2022-10-22 14:36:04", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-beijingPrisma02/anat/sub-beijingPrisma02_space-other_T2w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-beijingPrisma02/anat/sub-beijingPrisma02_space-other_T2w_desc-softseg_label-SC_seg.json index c0903d718d..c897218fac 100644 --- a/derivatives/labels_softseg_bin/sub-beijingPrisma02/anat/sub-beijingPrisma02_space-other_T2w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-beijingPrisma02/anat/sub-beijingPrisma02_space-other_T2w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:04" + "Date": "2022-10-22 14:36:04", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-beijingPrisma03/anat/sub-beijingPrisma03_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-beijingPrisma03/anat/sub-beijingPrisma03_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json index 6846b7f869..8998ed4c1e 100644 --- a/derivatives/labels_softseg_bin/sub-beijingPrisma03/anat/sub-beijingPrisma03_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-beijingPrisma03/anat/sub-beijingPrisma03_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:05" + "Date": "2022-10-22 14:36:05", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-beijingPrisma03/anat/sub-beijingPrisma03_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-beijingPrisma03/anat/sub-beijingPrisma03_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json index 6846b7f869..8998ed4c1e 100644 --- a/derivatives/labels_softseg_bin/sub-beijingPrisma03/anat/sub-beijingPrisma03_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-beijingPrisma03/anat/sub-beijingPrisma03_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:05" + "Date": "2022-10-22 14:36:05", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-beijingPrisma03/anat/sub-beijingPrisma03_space-other_T1w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-beijingPrisma03/anat/sub-beijingPrisma03_space-other_T1w_desc-softseg_label-SC_seg.json index 6846b7f869..bf848061bb 100644 --- a/derivatives/labels_softseg_bin/sub-beijingPrisma03/anat/sub-beijingPrisma03_space-other_T1w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-beijingPrisma03/anat/sub-beijingPrisma03_space-other_T1w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:05" + "Date": "2022-10-22 14:36:05", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-beijingPrisma03/anat/sub-beijingPrisma03_space-other_T2star_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-beijingPrisma03/anat/sub-beijingPrisma03_space-other_T2star_desc-softseg_label-SC_seg.json index 6846b7f869..e981c01895 100644 --- a/derivatives/labels_softseg_bin/sub-beijingPrisma03/anat/sub-beijingPrisma03_space-other_T2star_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-beijingPrisma03/anat/sub-beijingPrisma03_space-other_T2star_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:05" + "Date": "2022-10-22 14:36:05", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-beijingPrisma03/anat/sub-beijingPrisma03_space-other_T2w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-beijingPrisma03/anat/sub-beijingPrisma03_space-other_T2w_desc-softseg_label-SC_seg.json index 6846b7f869..06e3c334bc 100644 --- a/derivatives/labels_softseg_bin/sub-beijingPrisma03/anat/sub-beijingPrisma03_space-other_T2w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-beijingPrisma03/anat/sub-beijingPrisma03_space-other_T2w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:05" + "Date": "2022-10-22 14:36:05", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-beijingPrisma04/anat/sub-beijingPrisma04_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-beijingPrisma04/anat/sub-beijingPrisma04_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json index 6846b7f869..8998ed4c1e 100644 --- a/derivatives/labels_softseg_bin/sub-beijingPrisma04/anat/sub-beijingPrisma04_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-beijingPrisma04/anat/sub-beijingPrisma04_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:05" + "Date": "2022-10-22 14:36:05", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-beijingPrisma04/anat/sub-beijingPrisma04_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-beijingPrisma04/anat/sub-beijingPrisma04_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json index 6846b7f869..8998ed4c1e 100644 --- a/derivatives/labels_softseg_bin/sub-beijingPrisma04/anat/sub-beijingPrisma04_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-beijingPrisma04/anat/sub-beijingPrisma04_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:05" + "Date": "2022-10-22 14:36:05", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-beijingPrisma04/anat/sub-beijingPrisma04_space-other_T1w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-beijingPrisma04/anat/sub-beijingPrisma04_space-other_T1w_desc-softseg_label-SC_seg.json index 6846b7f869..bf848061bb 100644 --- a/derivatives/labels_softseg_bin/sub-beijingPrisma04/anat/sub-beijingPrisma04_space-other_T1w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-beijingPrisma04/anat/sub-beijingPrisma04_space-other_T1w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:05" + "Date": "2022-10-22 14:36:05", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-beijingPrisma04/anat/sub-beijingPrisma04_space-other_T2star_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-beijingPrisma04/anat/sub-beijingPrisma04_space-other_T2star_desc-softseg_label-SC_seg.json index 6846b7f869..e981c01895 100644 --- a/derivatives/labels_softseg_bin/sub-beijingPrisma04/anat/sub-beijingPrisma04_space-other_T2star_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-beijingPrisma04/anat/sub-beijingPrisma04_space-other_T2star_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:05" + "Date": "2022-10-22 14:36:05", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-beijingPrisma04/anat/sub-beijingPrisma04_space-other_T2w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-beijingPrisma04/anat/sub-beijingPrisma04_space-other_T2w_desc-softseg_label-SC_seg.json index 6846b7f869..06e3c334bc 100644 --- a/derivatives/labels_softseg_bin/sub-beijingPrisma04/anat/sub-beijingPrisma04_space-other_T2w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-beijingPrisma04/anat/sub-beijingPrisma04_space-other_T2w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:05" + "Date": "2022-10-22 14:36:05", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-beijingPrisma05/anat/sub-beijingPrisma05_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-beijingPrisma05/anat/sub-beijingPrisma05_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json index 6846b7f869..8998ed4c1e 100644 --- a/derivatives/labels_softseg_bin/sub-beijingPrisma05/anat/sub-beijingPrisma05_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-beijingPrisma05/anat/sub-beijingPrisma05_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:05" + "Date": "2022-10-22 14:36:05", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-beijingPrisma05/anat/sub-beijingPrisma05_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-beijingPrisma05/anat/sub-beijingPrisma05_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json index 6846b7f869..8998ed4c1e 100644 --- a/derivatives/labels_softseg_bin/sub-beijingPrisma05/anat/sub-beijingPrisma05_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-beijingPrisma05/anat/sub-beijingPrisma05_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:05" + "Date": "2022-10-22 14:36:05", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-beijingPrisma05/anat/sub-beijingPrisma05_space-other_T1w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-beijingPrisma05/anat/sub-beijingPrisma05_space-other_T1w_desc-softseg_label-SC_seg.json index 6846b7f869..bf848061bb 100644 --- a/derivatives/labels_softseg_bin/sub-beijingPrisma05/anat/sub-beijingPrisma05_space-other_T1w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-beijingPrisma05/anat/sub-beijingPrisma05_space-other_T1w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:05" + "Date": "2022-10-22 14:36:05", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-beijingPrisma05/anat/sub-beijingPrisma05_space-other_T2star_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-beijingPrisma05/anat/sub-beijingPrisma05_space-other_T2star_desc-softseg_label-SC_seg.json index 6846b7f869..e981c01895 100644 --- a/derivatives/labels_softseg_bin/sub-beijingPrisma05/anat/sub-beijingPrisma05_space-other_T2star_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-beijingPrisma05/anat/sub-beijingPrisma05_space-other_T2star_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:05" + "Date": "2022-10-22 14:36:05", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-beijingPrisma05/anat/sub-beijingPrisma05_space-other_T2w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-beijingPrisma05/anat/sub-beijingPrisma05_space-other_T2w_desc-softseg_label-SC_seg.json index 6846b7f869..06e3c334bc 100644 --- a/derivatives/labels_softseg_bin/sub-beijingPrisma05/anat/sub-beijingPrisma05_space-other_T2w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-beijingPrisma05/anat/sub-beijingPrisma05_space-other_T2w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:05" + "Date": "2022-10-22 14:36:05", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-brnoCeitec01/anat/sub-brnoCeitec01_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-brnoCeitec01/anat/sub-brnoCeitec01_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json index 85b3970175..973b24b130 100644 --- a/derivatives/labels_softseg_bin/sub-brnoCeitec01/anat/sub-brnoCeitec01_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-brnoCeitec01/anat/sub-brnoCeitec01_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:06" + "Date": "2022-10-22 14:36:06", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-brnoCeitec01/anat/sub-brnoCeitec01_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-brnoCeitec01/anat/sub-brnoCeitec01_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json index 85b3970175..973b24b130 100644 --- a/derivatives/labels_softseg_bin/sub-brnoCeitec01/anat/sub-brnoCeitec01_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-brnoCeitec01/anat/sub-brnoCeitec01_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:06" + "Date": "2022-10-22 14:36:06", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-brnoCeitec01/anat/sub-brnoCeitec01_space-other_T1w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-brnoCeitec01/anat/sub-brnoCeitec01_space-other_T1w_desc-softseg_label-SC_seg.json index 85b3970175..8037df508c 100644 --- a/derivatives/labels_softseg_bin/sub-brnoCeitec01/anat/sub-brnoCeitec01_space-other_T1w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-brnoCeitec01/anat/sub-brnoCeitec01_space-other_T1w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:06" + "Date": "2022-10-22 14:36:06", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-brnoCeitec01/anat/sub-brnoCeitec01_space-other_T2star_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-brnoCeitec01/anat/sub-brnoCeitec01_space-other_T2star_desc-softseg_label-SC_seg.json index 85b3970175..974bc14cf0 100644 --- a/derivatives/labels_softseg_bin/sub-brnoCeitec01/anat/sub-brnoCeitec01_space-other_T2star_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-brnoCeitec01/anat/sub-brnoCeitec01_space-other_T2star_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:06" + "Date": "2022-10-22 14:36:06", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-brnoCeitec01/anat/sub-brnoCeitec01_space-other_T2w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-brnoCeitec01/anat/sub-brnoCeitec01_space-other_T2w_desc-softseg_label-SC_seg.json index 85b3970175..ff69d4dbdb 100644 --- a/derivatives/labels_softseg_bin/sub-brnoCeitec01/anat/sub-brnoCeitec01_space-other_T2w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-brnoCeitec01/anat/sub-brnoCeitec01_space-other_T2w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:06" + "Date": "2022-10-22 14:36:06", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-brnoCeitec02/anat/sub-brnoCeitec02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-brnoCeitec02/anat/sub-brnoCeitec02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json index 85b3970175..973b24b130 100644 --- a/derivatives/labels_softseg_bin/sub-brnoCeitec02/anat/sub-brnoCeitec02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-brnoCeitec02/anat/sub-brnoCeitec02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:06" + "Date": "2022-10-22 14:36:06", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-brnoCeitec02/anat/sub-brnoCeitec02_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-brnoCeitec02/anat/sub-brnoCeitec02_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json index 85b3970175..973b24b130 100644 --- a/derivatives/labels_softseg_bin/sub-brnoCeitec02/anat/sub-brnoCeitec02_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-brnoCeitec02/anat/sub-brnoCeitec02_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:06" + "Date": "2022-10-22 14:36:06", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-brnoCeitec02/anat/sub-brnoCeitec02_space-other_T1w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-brnoCeitec02/anat/sub-brnoCeitec02_space-other_T1w_desc-softseg_label-SC_seg.json index 85b3970175..8037df508c 100644 --- a/derivatives/labels_softseg_bin/sub-brnoCeitec02/anat/sub-brnoCeitec02_space-other_T1w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-brnoCeitec02/anat/sub-brnoCeitec02_space-other_T1w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:06" + "Date": "2022-10-22 14:36:06", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-brnoCeitec02/anat/sub-brnoCeitec02_space-other_T2star_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-brnoCeitec02/anat/sub-brnoCeitec02_space-other_T2star_desc-softseg_label-SC_seg.json index a4c5e74415..41e7b8872b 100644 --- a/derivatives/labels_softseg_bin/sub-brnoCeitec02/anat/sub-brnoCeitec02_space-other_T2star_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-brnoCeitec02/anat/sub-brnoCeitec02_space-other_T2star_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:07" + "Date": "2022-10-22 14:36:07", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-brnoCeitec02/anat/sub-brnoCeitec02_space-other_T2w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-brnoCeitec02/anat/sub-brnoCeitec02_space-other_T2w_desc-softseg_label-SC_seg.json index a4c5e74415..5e1cc398f7 100644 --- a/derivatives/labels_softseg_bin/sub-brnoCeitec02/anat/sub-brnoCeitec02_space-other_T2w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-brnoCeitec02/anat/sub-brnoCeitec02_space-other_T2w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:07" + "Date": "2022-10-22 14:36:07", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-brnoCeitec03/anat/sub-brnoCeitec03_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-brnoCeitec03/anat/sub-brnoCeitec03_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json index a4c5e74415..babe752231 100644 --- a/derivatives/labels_softseg_bin/sub-brnoCeitec03/anat/sub-brnoCeitec03_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-brnoCeitec03/anat/sub-brnoCeitec03_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:07" + "Date": "2022-10-22 14:36:07", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-brnoCeitec03/anat/sub-brnoCeitec03_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-brnoCeitec03/anat/sub-brnoCeitec03_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json index a4c5e74415..babe752231 100644 --- a/derivatives/labels_softseg_bin/sub-brnoCeitec03/anat/sub-brnoCeitec03_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-brnoCeitec03/anat/sub-brnoCeitec03_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:07" + "Date": "2022-10-22 14:36:07", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-brnoCeitec03/anat/sub-brnoCeitec03_space-other_T1w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-brnoCeitec03/anat/sub-brnoCeitec03_space-other_T1w_desc-softseg_label-SC_seg.json index a4c5e74415..0ecd094409 100644 --- a/derivatives/labels_softseg_bin/sub-brnoCeitec03/anat/sub-brnoCeitec03_space-other_T1w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-brnoCeitec03/anat/sub-brnoCeitec03_space-other_T1w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:07" + "Date": "2022-10-22 14:36:07", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-brnoCeitec03/anat/sub-brnoCeitec03_space-other_T2star_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-brnoCeitec03/anat/sub-brnoCeitec03_space-other_T2star_desc-softseg_label-SC_seg.json index a4c5e74415..41e7b8872b 100644 --- a/derivatives/labels_softseg_bin/sub-brnoCeitec03/anat/sub-brnoCeitec03_space-other_T2star_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-brnoCeitec03/anat/sub-brnoCeitec03_space-other_T2star_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:07" + "Date": "2022-10-22 14:36:07", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-brnoCeitec03/anat/sub-brnoCeitec03_space-other_T2w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-brnoCeitec03/anat/sub-brnoCeitec03_space-other_T2w_desc-softseg_label-SC_seg.json index a4c5e74415..5e1cc398f7 100644 --- a/derivatives/labels_softseg_bin/sub-brnoCeitec03/anat/sub-brnoCeitec03_space-other_T2w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-brnoCeitec03/anat/sub-brnoCeitec03_space-other_T2w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:07" + "Date": "2022-10-22 14:36:07", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-brnoCeitec04/anat/sub-brnoCeitec04_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-brnoCeitec04/anat/sub-brnoCeitec04_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json index a4c5e74415..babe752231 100644 --- a/derivatives/labels_softseg_bin/sub-brnoCeitec04/anat/sub-brnoCeitec04_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-brnoCeitec04/anat/sub-brnoCeitec04_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:07" + "Date": "2022-10-22 14:36:07", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-brnoCeitec04/anat/sub-brnoCeitec04_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-brnoCeitec04/anat/sub-brnoCeitec04_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json index a4c5e74415..babe752231 100644 --- a/derivatives/labels_softseg_bin/sub-brnoCeitec04/anat/sub-brnoCeitec04_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-brnoCeitec04/anat/sub-brnoCeitec04_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:07" + "Date": "2022-10-22 14:36:07", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-brnoCeitec04/anat/sub-brnoCeitec04_space-other_T1w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-brnoCeitec04/anat/sub-brnoCeitec04_space-other_T1w_desc-softseg_label-SC_seg.json index a4c5e74415..0ecd094409 100644 --- a/derivatives/labels_softseg_bin/sub-brnoCeitec04/anat/sub-brnoCeitec04_space-other_T1w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-brnoCeitec04/anat/sub-brnoCeitec04_space-other_T1w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:07" + "Date": "2022-10-22 14:36:07", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-brnoCeitec04/anat/sub-brnoCeitec04_space-other_T2star_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-brnoCeitec04/anat/sub-brnoCeitec04_space-other_T2star_desc-softseg_label-SC_seg.json index a4c5e74415..41e7b8872b 100644 --- a/derivatives/labels_softseg_bin/sub-brnoCeitec04/anat/sub-brnoCeitec04_space-other_T2star_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-brnoCeitec04/anat/sub-brnoCeitec04_space-other_T2star_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:07" + "Date": "2022-10-22 14:36:07", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-brnoCeitec04/anat/sub-brnoCeitec04_space-other_T2w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-brnoCeitec04/anat/sub-brnoCeitec04_space-other_T2w_desc-softseg_label-SC_seg.json index a4c5e74415..5e1cc398f7 100644 --- a/derivatives/labels_softseg_bin/sub-brnoCeitec04/anat/sub-brnoCeitec04_space-other_T2w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-brnoCeitec04/anat/sub-brnoCeitec04_space-other_T2w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:07" + "Date": "2022-10-22 14:36:07", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-brnoCeitec05/anat/sub-brnoCeitec05_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-brnoCeitec05/anat/sub-brnoCeitec05_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json index a4c5e74415..babe752231 100644 --- a/derivatives/labels_softseg_bin/sub-brnoCeitec05/anat/sub-brnoCeitec05_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-brnoCeitec05/anat/sub-brnoCeitec05_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:07" + "Date": "2022-10-22 14:36:07", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-brnoCeitec05/anat/sub-brnoCeitec05_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-brnoCeitec05/anat/sub-brnoCeitec05_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json index a4c5e74415..babe752231 100644 --- a/derivatives/labels_softseg_bin/sub-brnoCeitec05/anat/sub-brnoCeitec05_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-brnoCeitec05/anat/sub-brnoCeitec05_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:07" + "Date": "2022-10-22 14:36:07", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-brnoCeitec05/anat/sub-brnoCeitec05_space-other_T1w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-brnoCeitec05/anat/sub-brnoCeitec05_space-other_T1w_desc-softseg_label-SC_seg.json index a4c5e74415..0ecd094409 100644 --- a/derivatives/labels_softseg_bin/sub-brnoCeitec05/anat/sub-brnoCeitec05_space-other_T1w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-brnoCeitec05/anat/sub-brnoCeitec05_space-other_T1w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:07" + "Date": "2022-10-22 14:36:07", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-brnoCeitec05/anat/sub-brnoCeitec05_space-other_T2star_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-brnoCeitec05/anat/sub-brnoCeitec05_space-other_T2star_desc-softseg_label-SC_seg.json index a4c5e74415..41e7b8872b 100644 --- a/derivatives/labels_softseg_bin/sub-brnoCeitec05/anat/sub-brnoCeitec05_space-other_T2star_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-brnoCeitec05/anat/sub-brnoCeitec05_space-other_T2star_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:07" + "Date": "2022-10-22 14:36:07", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-brnoCeitec05/anat/sub-brnoCeitec05_space-other_T2w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-brnoCeitec05/anat/sub-brnoCeitec05_space-other_T2w_desc-softseg_label-SC_seg.json index a4c5e74415..5e1cc398f7 100644 --- a/derivatives/labels_softseg_bin/sub-brnoCeitec05/anat/sub-brnoCeitec05_space-other_T2w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-brnoCeitec05/anat/sub-brnoCeitec05_space-other_T2w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:07" + "Date": "2022-10-22 14:36:07", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-brnoCeitec06/anat/sub-brnoCeitec06_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-brnoCeitec06/anat/sub-brnoCeitec06_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json index b8b40fdd0c..f2d35692cf 100644 --- a/derivatives/labels_softseg_bin/sub-brnoCeitec06/anat/sub-brnoCeitec06_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-brnoCeitec06/anat/sub-brnoCeitec06_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:08" + "Date": "2022-10-22 14:36:08", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-brnoCeitec06/anat/sub-brnoCeitec06_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-brnoCeitec06/anat/sub-brnoCeitec06_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json index b8b40fdd0c..f2d35692cf 100644 --- a/derivatives/labels_softseg_bin/sub-brnoCeitec06/anat/sub-brnoCeitec06_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-brnoCeitec06/anat/sub-brnoCeitec06_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:08" + "Date": "2022-10-22 14:36:08", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-brnoCeitec06/anat/sub-brnoCeitec06_space-other_T1w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-brnoCeitec06/anat/sub-brnoCeitec06_space-other_T1w_desc-softseg_label-SC_seg.json index b8b40fdd0c..1c03d83de9 100644 --- a/derivatives/labels_softseg_bin/sub-brnoCeitec06/anat/sub-brnoCeitec06_space-other_T1w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-brnoCeitec06/anat/sub-brnoCeitec06_space-other_T1w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:08" + "Date": "2022-10-22 14:36:08", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-brnoCeitec06/anat/sub-brnoCeitec06_space-other_T2star_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-brnoCeitec06/anat/sub-brnoCeitec06_space-other_T2star_desc-softseg_label-SC_seg.json index b8b40fdd0c..14365307fc 100644 --- a/derivatives/labels_softseg_bin/sub-brnoCeitec06/anat/sub-brnoCeitec06_space-other_T2star_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-brnoCeitec06/anat/sub-brnoCeitec06_space-other_T2star_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:08" + "Date": "2022-10-22 14:36:08", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-brnoCeitec06/anat/sub-brnoCeitec06_space-other_T2w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-brnoCeitec06/anat/sub-brnoCeitec06_space-other_T2w_desc-softseg_label-SC_seg.json index b8b40fdd0c..d1552c2ab7 100644 --- a/derivatives/labels_softseg_bin/sub-brnoCeitec06/anat/sub-brnoCeitec06_space-other_T2w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-brnoCeitec06/anat/sub-brnoCeitec06_space-other_T2w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:08" + "Date": "2022-10-22 14:36:08", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-brnoUhb01/anat/sub-brnoUhb01_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-brnoUhb01/anat/sub-brnoUhb01_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json index b8b40fdd0c..f2d35692cf 100644 --- a/derivatives/labels_softseg_bin/sub-brnoUhb01/anat/sub-brnoUhb01_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-brnoUhb01/anat/sub-brnoUhb01_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:08" + "Date": "2022-10-22 14:36:08", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-brnoUhb01/anat/sub-brnoUhb01_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-brnoUhb01/anat/sub-brnoUhb01_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json index b8b40fdd0c..f2d35692cf 100644 --- a/derivatives/labels_softseg_bin/sub-brnoUhb01/anat/sub-brnoUhb01_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-brnoUhb01/anat/sub-brnoUhb01_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:08" + "Date": "2022-10-22 14:36:08", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-brnoUhb01/anat/sub-brnoUhb01_space-other_T1w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-brnoUhb01/anat/sub-brnoUhb01_space-other_T1w_desc-softseg_label-SC_seg.json index b8b40fdd0c..1c03d83de9 100644 --- a/derivatives/labels_softseg_bin/sub-brnoUhb01/anat/sub-brnoUhb01_space-other_T1w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-brnoUhb01/anat/sub-brnoUhb01_space-other_T1w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:08" + "Date": "2022-10-22 14:36:08", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-brnoUhb01/anat/sub-brnoUhb01_space-other_T2star_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-brnoUhb01/anat/sub-brnoUhb01_space-other_T2star_desc-softseg_label-SC_seg.json index b8b40fdd0c..14365307fc 100644 --- a/derivatives/labels_softseg_bin/sub-brnoUhb01/anat/sub-brnoUhb01_space-other_T2star_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-brnoUhb01/anat/sub-brnoUhb01_space-other_T2star_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:08" + "Date": "2022-10-22 14:36:08", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-brnoUhb01/anat/sub-brnoUhb01_space-other_T2w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-brnoUhb01/anat/sub-brnoUhb01_space-other_T2w_desc-softseg_label-SC_seg.json index b8b40fdd0c..d1552c2ab7 100644 --- a/derivatives/labels_softseg_bin/sub-brnoUhb01/anat/sub-brnoUhb01_space-other_T2w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-brnoUhb01/anat/sub-brnoUhb01_space-other_T2w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:08" + "Date": "2022-10-22 14:36:08", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-brnoUhb04/anat/sub-brnoUhb04_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-brnoUhb04/anat/sub-brnoUhb04_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json index eaac26b8cd..6010e223f5 100644 --- a/derivatives/labels_softseg_bin/sub-brnoUhb04/anat/sub-brnoUhb04_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-brnoUhb04/anat/sub-brnoUhb04_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:09" + "Date": "2022-10-22 14:36:09", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-brnoUhb04/anat/sub-brnoUhb04_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-brnoUhb04/anat/sub-brnoUhb04_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json index eaac26b8cd..6010e223f5 100644 --- a/derivatives/labels_softseg_bin/sub-brnoUhb04/anat/sub-brnoUhb04_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-brnoUhb04/anat/sub-brnoUhb04_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:09" + "Date": "2022-10-22 14:36:09", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-brnoUhb04/anat/sub-brnoUhb04_space-other_T1w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-brnoUhb04/anat/sub-brnoUhb04_space-other_T1w_desc-softseg_label-SC_seg.json index eaac26b8cd..738b9da33d 100644 --- a/derivatives/labels_softseg_bin/sub-brnoUhb04/anat/sub-brnoUhb04_space-other_T1w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-brnoUhb04/anat/sub-brnoUhb04_space-other_T1w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:09" + "Date": "2022-10-22 14:36:09", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-brnoUhb04/anat/sub-brnoUhb04_space-other_T2star_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-brnoUhb04/anat/sub-brnoUhb04_space-other_T2star_desc-softseg_label-SC_seg.json index eaac26b8cd..bd1a366351 100644 --- a/derivatives/labels_softseg_bin/sub-brnoUhb04/anat/sub-brnoUhb04_space-other_T2star_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-brnoUhb04/anat/sub-brnoUhb04_space-other_T2star_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:09" + "Date": "2022-10-22 14:36:09", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-brnoUhb04/anat/sub-brnoUhb04_space-other_T2w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-brnoUhb04/anat/sub-brnoUhb04_space-other_T2w_desc-softseg_label-SC_seg.json index eaac26b8cd..3683b013c0 100644 --- a/derivatives/labels_softseg_bin/sub-brnoUhb04/anat/sub-brnoUhb04_space-other_T2w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-brnoUhb04/anat/sub-brnoUhb04_space-other_T2w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:09" + "Date": "2022-10-22 14:36:09", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-brnoUhb05/anat/sub-brnoUhb05_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-brnoUhb05/anat/sub-brnoUhb05_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json index eaac26b8cd..6010e223f5 100644 --- a/derivatives/labels_softseg_bin/sub-brnoUhb05/anat/sub-brnoUhb05_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-brnoUhb05/anat/sub-brnoUhb05_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:09" + "Date": "2022-10-22 14:36:09", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-brnoUhb05/anat/sub-brnoUhb05_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-brnoUhb05/anat/sub-brnoUhb05_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json index eaac26b8cd..6010e223f5 100644 --- a/derivatives/labels_softseg_bin/sub-brnoUhb05/anat/sub-brnoUhb05_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-brnoUhb05/anat/sub-brnoUhb05_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:09" + "Date": "2022-10-22 14:36:09", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-brnoUhb05/anat/sub-brnoUhb05_space-other_T1w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-brnoUhb05/anat/sub-brnoUhb05_space-other_T1w_desc-softseg_label-SC_seg.json index eaac26b8cd..738b9da33d 100644 --- a/derivatives/labels_softseg_bin/sub-brnoUhb05/anat/sub-brnoUhb05_space-other_T1w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-brnoUhb05/anat/sub-brnoUhb05_space-other_T1w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:09" + "Date": "2022-10-22 14:36:09", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-brnoUhb05/anat/sub-brnoUhb05_space-other_T2star_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-brnoUhb05/anat/sub-brnoUhb05_space-other_T2star_desc-softseg_label-SC_seg.json index eaac26b8cd..bd1a366351 100644 --- a/derivatives/labels_softseg_bin/sub-brnoUhb05/anat/sub-brnoUhb05_space-other_T2star_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-brnoUhb05/anat/sub-brnoUhb05_space-other_T2star_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:09" + "Date": "2022-10-22 14:36:09", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-brnoUhb05/anat/sub-brnoUhb05_space-other_T2w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-brnoUhb05/anat/sub-brnoUhb05_space-other_T2w_desc-softseg_label-SC_seg.json index eaac26b8cd..3683b013c0 100644 --- a/derivatives/labels_softseg_bin/sub-brnoUhb05/anat/sub-brnoUhb05_space-other_T2w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-brnoUhb05/anat/sub-brnoUhb05_space-other_T2w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:09" + "Date": "2022-10-22 14:36:09", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-brnoUhb06/anat/sub-brnoUhb06_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-brnoUhb06/anat/sub-brnoUhb06_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json index eaac26b8cd..6010e223f5 100644 --- a/derivatives/labels_softseg_bin/sub-brnoUhb06/anat/sub-brnoUhb06_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-brnoUhb06/anat/sub-brnoUhb06_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:09" + "Date": "2022-10-22 14:36:09", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-brnoUhb06/anat/sub-brnoUhb06_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-brnoUhb06/anat/sub-brnoUhb06_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json index eaac26b8cd..6010e223f5 100644 --- a/derivatives/labels_softseg_bin/sub-brnoUhb06/anat/sub-brnoUhb06_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-brnoUhb06/anat/sub-brnoUhb06_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:09" + "Date": "2022-10-22 14:36:09", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-brnoUhb06/anat/sub-brnoUhb06_space-other_T1w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-brnoUhb06/anat/sub-brnoUhb06_space-other_T1w_desc-softseg_label-SC_seg.json index eaac26b8cd..738b9da33d 100644 --- a/derivatives/labels_softseg_bin/sub-brnoUhb06/anat/sub-brnoUhb06_space-other_T1w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-brnoUhb06/anat/sub-brnoUhb06_space-other_T1w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:09" + "Date": "2022-10-22 14:36:09", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-brnoUhb06/anat/sub-brnoUhb06_space-other_T2star_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-brnoUhb06/anat/sub-brnoUhb06_space-other_T2star_desc-softseg_label-SC_seg.json index eaac26b8cd..bd1a366351 100644 --- a/derivatives/labels_softseg_bin/sub-brnoUhb06/anat/sub-brnoUhb06_space-other_T2star_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-brnoUhb06/anat/sub-brnoUhb06_space-other_T2star_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:09" + "Date": "2022-10-22 14:36:09", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-brnoUhb06/anat/sub-brnoUhb06_space-other_T2w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-brnoUhb06/anat/sub-brnoUhb06_space-other_T2w_desc-softseg_label-SC_seg.json index eaac26b8cd..3683b013c0 100644 --- a/derivatives/labels_softseg_bin/sub-brnoUhb06/anat/sub-brnoUhb06_space-other_T2w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-brnoUhb06/anat/sub-brnoUhb06_space-other_T2w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:09" + "Date": "2022-10-22 14:36:09", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-cardiff01/anat/sub-cardiff01_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-cardiff01/anat/sub-cardiff01_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json index 5c91cc4892..360e874a79 100644 --- a/derivatives/labels_softseg_bin/sub-cardiff01/anat/sub-cardiff01_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-cardiff01/anat/sub-cardiff01_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:10" + "Date": "2022-10-22 14:36:10", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-cardiff01/anat/sub-cardiff01_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-cardiff01/anat/sub-cardiff01_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json index 5c91cc4892..360e874a79 100644 --- a/derivatives/labels_softseg_bin/sub-cardiff01/anat/sub-cardiff01_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-cardiff01/anat/sub-cardiff01_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:10" + "Date": "2022-10-22 14:36:10", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-cardiff01/anat/sub-cardiff01_space-other_T1w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-cardiff01/anat/sub-cardiff01_space-other_T1w_desc-softseg_label-SC_seg.json index 5c91cc4892..edfcc4321f 100644 --- a/derivatives/labels_softseg_bin/sub-cardiff01/anat/sub-cardiff01_space-other_T1w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-cardiff01/anat/sub-cardiff01_space-other_T1w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:10" + "Date": "2022-10-22 14:36:10", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-cardiff01/anat/sub-cardiff01_space-other_T2star_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-cardiff01/anat/sub-cardiff01_space-other_T2star_desc-softseg_label-SC_seg.json index 5c91cc4892..b406aa8f4c 100644 --- a/derivatives/labels_softseg_bin/sub-cardiff01/anat/sub-cardiff01_space-other_T2star_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-cardiff01/anat/sub-cardiff01_space-other_T2star_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:10" + "Date": "2022-10-22 14:36:10", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-cardiff01/anat/sub-cardiff01_space-other_T2w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-cardiff01/anat/sub-cardiff01_space-other_T2w_desc-softseg_label-SC_seg.json index 5c91cc4892..b3cadb6670 100644 --- a/derivatives/labels_softseg_bin/sub-cardiff01/anat/sub-cardiff01_space-other_T2w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-cardiff01/anat/sub-cardiff01_space-other_T2w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:10" + "Date": "2022-10-22 14:36:10", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-cardiff02/anat/sub-cardiff02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-cardiff02/anat/sub-cardiff02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json index 5c91cc4892..360e874a79 100644 --- a/derivatives/labels_softseg_bin/sub-cardiff02/anat/sub-cardiff02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-cardiff02/anat/sub-cardiff02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:10" + "Date": "2022-10-22 14:36:10", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-cardiff02/anat/sub-cardiff02_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-cardiff02/anat/sub-cardiff02_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json index 5c91cc4892..360e874a79 100644 --- a/derivatives/labels_softseg_bin/sub-cardiff02/anat/sub-cardiff02_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-cardiff02/anat/sub-cardiff02_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:10" + "Date": "2022-10-22 14:36:10", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-cardiff02/anat/sub-cardiff02_space-other_T1w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-cardiff02/anat/sub-cardiff02_space-other_T1w_desc-softseg_label-SC_seg.json index 5c91cc4892..edfcc4321f 100644 --- a/derivatives/labels_softseg_bin/sub-cardiff02/anat/sub-cardiff02_space-other_T1w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-cardiff02/anat/sub-cardiff02_space-other_T1w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:10" + "Date": "2022-10-22 14:36:10", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-cardiff02/anat/sub-cardiff02_space-other_T2star_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-cardiff02/anat/sub-cardiff02_space-other_T2star_desc-softseg_label-SC_seg.json index 5c91cc4892..b406aa8f4c 100644 --- a/derivatives/labels_softseg_bin/sub-cardiff02/anat/sub-cardiff02_space-other_T2star_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-cardiff02/anat/sub-cardiff02_space-other_T2star_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:10" + "Date": "2022-10-22 14:36:10", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-cardiff02/anat/sub-cardiff02_space-other_T2w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-cardiff02/anat/sub-cardiff02_space-other_T2w_desc-softseg_label-SC_seg.json index 5c91cc4892..b3cadb6670 100644 --- a/derivatives/labels_softseg_bin/sub-cardiff02/anat/sub-cardiff02_space-other_T2w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-cardiff02/anat/sub-cardiff02_space-other_T2w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:10" + "Date": "2022-10-22 14:36:10", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-cardiff03/anat/sub-cardiff03_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-cardiff03/anat/sub-cardiff03_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json index 5c91cc4892..360e874a79 100644 --- a/derivatives/labels_softseg_bin/sub-cardiff03/anat/sub-cardiff03_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-cardiff03/anat/sub-cardiff03_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:10" + "Date": "2022-10-22 14:36:10", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-cardiff03/anat/sub-cardiff03_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-cardiff03/anat/sub-cardiff03_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json index 1bcf4e0cb1..2bb7485300 100644 --- a/derivatives/labels_softseg_bin/sub-cardiff03/anat/sub-cardiff03_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-cardiff03/anat/sub-cardiff03_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:11" + "Date": "2022-10-22 14:36:11", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-cardiff03/anat/sub-cardiff03_space-other_T1w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-cardiff03/anat/sub-cardiff03_space-other_T1w_desc-softseg_label-SC_seg.json index 1bcf4e0cb1..9a4c72837c 100644 --- a/derivatives/labels_softseg_bin/sub-cardiff03/anat/sub-cardiff03_space-other_T1w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-cardiff03/anat/sub-cardiff03_space-other_T1w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:11" + "Date": "2022-10-22 14:36:11", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-cardiff03/anat/sub-cardiff03_space-other_T2star_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-cardiff03/anat/sub-cardiff03_space-other_T2star_desc-softseg_label-SC_seg.json index 1bcf4e0cb1..8512a4d479 100644 --- a/derivatives/labels_softseg_bin/sub-cardiff03/anat/sub-cardiff03_space-other_T2star_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-cardiff03/anat/sub-cardiff03_space-other_T2star_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:11" + "Date": "2022-10-22 14:36:11", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-cardiff03/anat/sub-cardiff03_space-other_T2w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-cardiff03/anat/sub-cardiff03_space-other_T2w_desc-softseg_label-SC_seg.json index 1bcf4e0cb1..861a1d1770 100644 --- a/derivatives/labels_softseg_bin/sub-cardiff03/anat/sub-cardiff03_space-other_T2w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-cardiff03/anat/sub-cardiff03_space-other_T2w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:11" + "Date": "2022-10-22 14:36:11", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-cardiff04/anat/sub-cardiff04_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-cardiff04/anat/sub-cardiff04_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json index 1bcf4e0cb1..2bb7485300 100644 --- a/derivatives/labels_softseg_bin/sub-cardiff04/anat/sub-cardiff04_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-cardiff04/anat/sub-cardiff04_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:11" + "Date": "2022-10-22 14:36:11", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-cardiff04/anat/sub-cardiff04_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-cardiff04/anat/sub-cardiff04_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json index 1bcf4e0cb1..2bb7485300 100644 --- a/derivatives/labels_softseg_bin/sub-cardiff04/anat/sub-cardiff04_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-cardiff04/anat/sub-cardiff04_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:11" + "Date": "2022-10-22 14:36:11", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-cardiff04/anat/sub-cardiff04_space-other_T1w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-cardiff04/anat/sub-cardiff04_space-other_T1w_desc-softseg_label-SC_seg.json index 1bcf4e0cb1..9a4c72837c 100644 --- a/derivatives/labels_softseg_bin/sub-cardiff04/anat/sub-cardiff04_space-other_T1w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-cardiff04/anat/sub-cardiff04_space-other_T1w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:11" + "Date": "2022-10-22 14:36:11", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-cardiff04/anat/sub-cardiff04_space-other_T2star_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-cardiff04/anat/sub-cardiff04_space-other_T2star_desc-softseg_label-SC_seg.json index 1bcf4e0cb1..8512a4d479 100644 --- a/derivatives/labels_softseg_bin/sub-cardiff04/anat/sub-cardiff04_space-other_T2star_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-cardiff04/anat/sub-cardiff04_space-other_T2star_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:11" + "Date": "2022-10-22 14:36:11", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-cardiff04/anat/sub-cardiff04_space-other_T2w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-cardiff04/anat/sub-cardiff04_space-other_T2w_desc-softseg_label-SC_seg.json index 1bcf4e0cb1..861a1d1770 100644 --- a/derivatives/labels_softseg_bin/sub-cardiff04/anat/sub-cardiff04_space-other_T2w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-cardiff04/anat/sub-cardiff04_space-other_T2w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:11" + "Date": "2022-10-22 14:36:11", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-cardiff05/anat/sub-cardiff05_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-cardiff05/anat/sub-cardiff05_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json index 1bcf4e0cb1..2bb7485300 100644 --- a/derivatives/labels_softseg_bin/sub-cardiff05/anat/sub-cardiff05_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-cardiff05/anat/sub-cardiff05_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:11" + "Date": "2022-10-22 14:36:11", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-cardiff05/anat/sub-cardiff05_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-cardiff05/anat/sub-cardiff05_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json index 1bcf4e0cb1..2bb7485300 100644 --- a/derivatives/labels_softseg_bin/sub-cardiff05/anat/sub-cardiff05_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-cardiff05/anat/sub-cardiff05_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:11" + "Date": "2022-10-22 14:36:11", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-cardiff05/anat/sub-cardiff05_space-other_T1w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-cardiff05/anat/sub-cardiff05_space-other_T1w_desc-softseg_label-SC_seg.json index 1bcf4e0cb1..9a4c72837c 100644 --- a/derivatives/labels_softseg_bin/sub-cardiff05/anat/sub-cardiff05_space-other_T1w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-cardiff05/anat/sub-cardiff05_space-other_T1w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:11" + "Date": "2022-10-22 14:36:11", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-cardiff05/anat/sub-cardiff05_space-other_T2star_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-cardiff05/anat/sub-cardiff05_space-other_T2star_desc-softseg_label-SC_seg.json index 1bcf4e0cb1..8512a4d479 100644 --- a/derivatives/labels_softseg_bin/sub-cardiff05/anat/sub-cardiff05_space-other_T2star_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-cardiff05/anat/sub-cardiff05_space-other_T2star_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:11" + "Date": "2022-10-22 14:36:11", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-cardiff05/anat/sub-cardiff05_space-other_T2w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-cardiff05/anat/sub-cardiff05_space-other_T2w_desc-softseg_label-SC_seg.json index 1bcf4e0cb1..861a1d1770 100644 --- a/derivatives/labels_softseg_bin/sub-cardiff05/anat/sub-cardiff05_space-other_T2w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-cardiff05/anat/sub-cardiff05_space-other_T2w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:11" + "Date": "2022-10-22 14:36:11", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-cardiff06/anat/sub-cardiff06_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-cardiff06/anat/sub-cardiff06_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json index 1bcf4e0cb1..2bb7485300 100644 --- a/derivatives/labels_softseg_bin/sub-cardiff06/anat/sub-cardiff06_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-cardiff06/anat/sub-cardiff06_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:11" + "Date": "2022-10-22 14:36:11", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-cardiff06/anat/sub-cardiff06_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-cardiff06/anat/sub-cardiff06_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json index 1bcf4e0cb1..2bb7485300 100644 --- a/derivatives/labels_softseg_bin/sub-cardiff06/anat/sub-cardiff06_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-cardiff06/anat/sub-cardiff06_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:11" + "Date": "2022-10-22 14:36:11", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-cardiff06/anat/sub-cardiff06_space-other_T1w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-cardiff06/anat/sub-cardiff06_space-other_T1w_desc-softseg_label-SC_seg.json index 1bcf4e0cb1..9a4c72837c 100644 --- a/derivatives/labels_softseg_bin/sub-cardiff06/anat/sub-cardiff06_space-other_T1w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-cardiff06/anat/sub-cardiff06_space-other_T1w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:11" + "Date": "2022-10-22 14:36:11", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-cardiff06/anat/sub-cardiff06_space-other_T2star_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-cardiff06/anat/sub-cardiff06_space-other_T2star_desc-softseg_label-SC_seg.json index 1bcf4e0cb1..8512a4d479 100644 --- a/derivatives/labels_softseg_bin/sub-cardiff06/anat/sub-cardiff06_space-other_T2star_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-cardiff06/anat/sub-cardiff06_space-other_T2star_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:11" + "Date": "2022-10-22 14:36:11", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-cardiff06/anat/sub-cardiff06_space-other_T2w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-cardiff06/anat/sub-cardiff06_space-other_T2w_desc-softseg_label-SC_seg.json index 1bcf4e0cb1..861a1d1770 100644 --- a/derivatives/labels_softseg_bin/sub-cardiff06/anat/sub-cardiff06_space-other_T2w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-cardiff06/anat/sub-cardiff06_space-other_T2w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:11" + "Date": "2022-10-22 14:36:11", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-cmrra01/anat/sub-cmrra01_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-cmrra01/anat/sub-cmrra01_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json index 1bcf4e0cb1..2bb7485300 100644 --- a/derivatives/labels_softseg_bin/sub-cmrra01/anat/sub-cmrra01_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-cmrra01/anat/sub-cmrra01_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:11" + "Date": "2022-10-22 14:36:11", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-cmrra01/anat/sub-cmrra01_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-cmrra01/anat/sub-cmrra01_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json index 1bcf4e0cb1..2bb7485300 100644 --- a/derivatives/labels_softseg_bin/sub-cmrra01/anat/sub-cmrra01_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-cmrra01/anat/sub-cmrra01_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:11" + "Date": "2022-10-22 14:36:11", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-cmrra01/anat/sub-cmrra01_space-other_T1w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-cmrra01/anat/sub-cmrra01_space-other_T1w_desc-softseg_label-SC_seg.json index 1bcf4e0cb1..9a4c72837c 100644 --- a/derivatives/labels_softseg_bin/sub-cmrra01/anat/sub-cmrra01_space-other_T1w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-cmrra01/anat/sub-cmrra01_space-other_T1w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:11" + "Date": "2022-10-22 14:36:11", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-cmrra01/anat/sub-cmrra01_space-other_T2star_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-cmrra01/anat/sub-cmrra01_space-other_T2star_desc-softseg_label-SC_seg.json index 908d970611..fda18c488f 100644 --- a/derivatives/labels_softseg_bin/sub-cmrra01/anat/sub-cmrra01_space-other_T2star_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-cmrra01/anat/sub-cmrra01_space-other_T2star_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:12" + "Date": "2022-10-22 14:36:12", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-cmrra01/anat/sub-cmrra01_space-other_T2w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-cmrra01/anat/sub-cmrra01_space-other_T2w_desc-softseg_label-SC_seg.json index 908d970611..8b4fd43f7d 100644 --- a/derivatives/labels_softseg_bin/sub-cmrra01/anat/sub-cmrra01_space-other_T2w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-cmrra01/anat/sub-cmrra01_space-other_T2w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:12" + "Date": "2022-10-22 14:36:12", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-cmrra02/anat/sub-cmrra02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-cmrra02/anat/sub-cmrra02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json index 908d970611..28b9f3f5ed 100644 --- a/derivatives/labels_softseg_bin/sub-cmrra02/anat/sub-cmrra02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-cmrra02/anat/sub-cmrra02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:12" + "Date": "2022-10-22 14:36:12", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-cmrra02/anat/sub-cmrra02_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-cmrra02/anat/sub-cmrra02_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json index 908d970611..28b9f3f5ed 100644 --- a/derivatives/labels_softseg_bin/sub-cmrra02/anat/sub-cmrra02_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-cmrra02/anat/sub-cmrra02_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:12" + "Date": "2022-10-22 14:36:12", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-cmrra02/anat/sub-cmrra02_space-other_T1w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-cmrra02/anat/sub-cmrra02_space-other_T1w_desc-softseg_label-SC_seg.json index 908d970611..fd5f1cfe1b 100644 --- a/derivatives/labels_softseg_bin/sub-cmrra02/anat/sub-cmrra02_space-other_T1w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-cmrra02/anat/sub-cmrra02_space-other_T1w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:12" + "Date": "2022-10-22 14:36:12", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-cmrra02/anat/sub-cmrra02_space-other_T2star_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-cmrra02/anat/sub-cmrra02_space-other_T2star_desc-softseg_label-SC_seg.json index 908d970611..fda18c488f 100644 --- a/derivatives/labels_softseg_bin/sub-cmrra02/anat/sub-cmrra02_space-other_T2star_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-cmrra02/anat/sub-cmrra02_space-other_T2star_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:12" + "Date": "2022-10-22 14:36:12", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-cmrra02/anat/sub-cmrra02_space-other_T2w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-cmrra02/anat/sub-cmrra02_space-other_T2w_desc-softseg_label-SC_seg.json index 908d970611..8b4fd43f7d 100644 --- a/derivatives/labels_softseg_bin/sub-cmrra02/anat/sub-cmrra02_space-other_T2w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-cmrra02/anat/sub-cmrra02_space-other_T2w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:12" + "Date": "2022-10-22 14:36:12", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-cmrra03/anat/sub-cmrra03_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-cmrra03/anat/sub-cmrra03_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json index 908d970611..28b9f3f5ed 100644 --- a/derivatives/labels_softseg_bin/sub-cmrra03/anat/sub-cmrra03_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-cmrra03/anat/sub-cmrra03_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:12" + "Date": "2022-10-22 14:36:12", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-cmrra03/anat/sub-cmrra03_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-cmrra03/anat/sub-cmrra03_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json index 908d970611..28b9f3f5ed 100644 --- a/derivatives/labels_softseg_bin/sub-cmrra03/anat/sub-cmrra03_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-cmrra03/anat/sub-cmrra03_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:12" + "Date": "2022-10-22 14:36:12", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-cmrra03/anat/sub-cmrra03_space-other_T1w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-cmrra03/anat/sub-cmrra03_space-other_T1w_desc-softseg_label-SC_seg.json index 908d970611..fd5f1cfe1b 100644 --- a/derivatives/labels_softseg_bin/sub-cmrra03/anat/sub-cmrra03_space-other_T1w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-cmrra03/anat/sub-cmrra03_space-other_T1w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:12" + "Date": "2022-10-22 14:36:12", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-cmrra03/anat/sub-cmrra03_space-other_T2star_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-cmrra03/anat/sub-cmrra03_space-other_T2star_desc-softseg_label-SC_seg.json index 908d970611..fda18c488f 100644 --- a/derivatives/labels_softseg_bin/sub-cmrra03/anat/sub-cmrra03_space-other_T2star_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-cmrra03/anat/sub-cmrra03_space-other_T2star_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:12" + "Date": "2022-10-22 14:36:12", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-cmrra03/anat/sub-cmrra03_space-other_T2w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-cmrra03/anat/sub-cmrra03_space-other_T2w_desc-softseg_label-SC_seg.json index 908d970611..8b4fd43f7d 100644 --- a/derivatives/labels_softseg_bin/sub-cmrra03/anat/sub-cmrra03_space-other_T2w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-cmrra03/anat/sub-cmrra03_space-other_T2w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:12" + "Date": "2022-10-22 14:36:12", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-cmrra04/anat/sub-cmrra04_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-cmrra04/anat/sub-cmrra04_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json index 908d970611..28b9f3f5ed 100644 --- a/derivatives/labels_softseg_bin/sub-cmrra04/anat/sub-cmrra04_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-cmrra04/anat/sub-cmrra04_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:12" + "Date": "2022-10-22 14:36:12", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-cmrra04/anat/sub-cmrra04_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-cmrra04/anat/sub-cmrra04_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json index 908d970611..28b9f3f5ed 100644 --- a/derivatives/labels_softseg_bin/sub-cmrra04/anat/sub-cmrra04_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-cmrra04/anat/sub-cmrra04_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:12" + "Date": "2022-10-22 14:36:12", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-cmrra04/anat/sub-cmrra04_space-other_T1w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-cmrra04/anat/sub-cmrra04_space-other_T1w_desc-softseg_label-SC_seg.json index 908d970611..fd5f1cfe1b 100644 --- a/derivatives/labels_softseg_bin/sub-cmrra04/anat/sub-cmrra04_space-other_T1w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-cmrra04/anat/sub-cmrra04_space-other_T1w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:12" + "Date": "2022-10-22 14:36:12", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-cmrra04/anat/sub-cmrra04_space-other_T2star_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-cmrra04/anat/sub-cmrra04_space-other_T2star_desc-softseg_label-SC_seg.json index 908d970611..fda18c488f 100644 --- a/derivatives/labels_softseg_bin/sub-cmrra04/anat/sub-cmrra04_space-other_T2star_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-cmrra04/anat/sub-cmrra04_space-other_T2star_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:12" + "Date": "2022-10-22 14:36:12", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-cmrra04/anat/sub-cmrra04_space-other_T2w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-cmrra04/anat/sub-cmrra04_space-other_T2w_desc-softseg_label-SC_seg.json index 97c8d1f4b5..685726716c 100644 --- a/derivatives/labels_softseg_bin/sub-cmrra04/anat/sub-cmrra04_space-other_T2w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-cmrra04/anat/sub-cmrra04_space-other_T2w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:13" + "Date": "2022-10-22 14:36:13", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-cmrra05/anat/sub-cmrra05_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-cmrra05/anat/sub-cmrra05_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json index 97c8d1f4b5..d018bd5322 100644 --- a/derivatives/labels_softseg_bin/sub-cmrra05/anat/sub-cmrra05_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-cmrra05/anat/sub-cmrra05_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:13" + "Date": "2022-10-22 14:36:13", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-cmrra05/anat/sub-cmrra05_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-cmrra05/anat/sub-cmrra05_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json index 97c8d1f4b5..d018bd5322 100644 --- a/derivatives/labels_softseg_bin/sub-cmrra05/anat/sub-cmrra05_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-cmrra05/anat/sub-cmrra05_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:13" + "Date": "2022-10-22 14:36:13", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-cmrra05/anat/sub-cmrra05_space-other_T1w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-cmrra05/anat/sub-cmrra05_space-other_T1w_desc-softseg_label-SC_seg.json index 97c8d1f4b5..6de4af4e61 100644 --- a/derivatives/labels_softseg_bin/sub-cmrra05/anat/sub-cmrra05_space-other_T1w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-cmrra05/anat/sub-cmrra05_space-other_T1w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:13" + "Date": "2022-10-22 14:36:13", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-cmrra05/anat/sub-cmrra05_space-other_T2star_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-cmrra05/anat/sub-cmrra05_space-other_T2star_desc-softseg_label-SC_seg.json index 97c8d1f4b5..5f5b22f2e4 100644 --- a/derivatives/labels_softseg_bin/sub-cmrra05/anat/sub-cmrra05_space-other_T2star_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-cmrra05/anat/sub-cmrra05_space-other_T2star_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:13" + "Date": "2022-10-22 14:36:13", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-cmrra05/anat/sub-cmrra05_space-other_T2w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-cmrra05/anat/sub-cmrra05_space-other_T2w_desc-softseg_label-SC_seg.json index 97c8d1f4b5..685726716c 100644 --- a/derivatives/labels_softseg_bin/sub-cmrra05/anat/sub-cmrra05_space-other_T2w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-cmrra05/anat/sub-cmrra05_space-other_T2w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:13" + "Date": "2022-10-22 14:36:13", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-cmrra06/anat/sub-cmrra06_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-cmrra06/anat/sub-cmrra06_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json index 97c8d1f4b5..d018bd5322 100644 --- a/derivatives/labels_softseg_bin/sub-cmrra06/anat/sub-cmrra06_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-cmrra06/anat/sub-cmrra06_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:13" + "Date": "2022-10-22 14:36:13", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-cmrra06/anat/sub-cmrra06_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-cmrra06/anat/sub-cmrra06_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json index 97c8d1f4b5..d018bd5322 100644 --- a/derivatives/labels_softseg_bin/sub-cmrra06/anat/sub-cmrra06_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-cmrra06/anat/sub-cmrra06_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:13" + "Date": "2022-10-22 14:36:13", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-cmrra06/anat/sub-cmrra06_space-other_T1w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-cmrra06/anat/sub-cmrra06_space-other_T1w_desc-softseg_label-SC_seg.json index 97c8d1f4b5..6de4af4e61 100644 --- a/derivatives/labels_softseg_bin/sub-cmrra06/anat/sub-cmrra06_space-other_T1w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-cmrra06/anat/sub-cmrra06_space-other_T1w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:13" + "Date": "2022-10-22 14:36:13", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-cmrra06/anat/sub-cmrra06_space-other_T2star_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-cmrra06/anat/sub-cmrra06_space-other_T2star_desc-softseg_label-SC_seg.json index 97c8d1f4b5..5f5b22f2e4 100644 --- a/derivatives/labels_softseg_bin/sub-cmrra06/anat/sub-cmrra06_space-other_T2star_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-cmrra06/anat/sub-cmrra06_space-other_T2star_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:13" + "Date": "2022-10-22 14:36:13", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-cmrra06/anat/sub-cmrra06_space-other_T2w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-cmrra06/anat/sub-cmrra06_space-other_T2w_desc-softseg_label-SC_seg.json index 97c8d1f4b5..685726716c 100644 --- a/derivatives/labels_softseg_bin/sub-cmrra06/anat/sub-cmrra06_space-other_T2w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-cmrra06/anat/sub-cmrra06_space-other_T2w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:13" + "Date": "2022-10-22 14:36:13", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-cmrrb01/anat/sub-cmrrb01_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-cmrrb01/anat/sub-cmrrb01_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json index 97c8d1f4b5..d018bd5322 100644 --- a/derivatives/labels_softseg_bin/sub-cmrrb01/anat/sub-cmrrb01_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-cmrrb01/anat/sub-cmrrb01_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:13" + "Date": "2022-10-22 14:36:13", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-cmrrb01/anat/sub-cmrrb01_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-cmrrb01/anat/sub-cmrrb01_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json index 97c8d1f4b5..d018bd5322 100644 --- a/derivatives/labels_softseg_bin/sub-cmrrb01/anat/sub-cmrrb01_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-cmrrb01/anat/sub-cmrrb01_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:13" + "Date": "2022-10-22 14:36:13", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-cmrrb01/anat/sub-cmrrb01_space-other_T1w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-cmrrb01/anat/sub-cmrrb01_space-other_T1w_desc-softseg_label-SC_seg.json index 97c8d1f4b5..6de4af4e61 100644 --- a/derivatives/labels_softseg_bin/sub-cmrrb01/anat/sub-cmrrb01_space-other_T1w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-cmrrb01/anat/sub-cmrrb01_space-other_T1w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:13" + "Date": "2022-10-22 14:36:13", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-cmrrb01/anat/sub-cmrrb01_space-other_T2star_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-cmrrb01/anat/sub-cmrrb01_space-other_T2star_desc-softseg_label-SC_seg.json index 97c8d1f4b5..5f5b22f2e4 100644 --- a/derivatives/labels_softseg_bin/sub-cmrrb01/anat/sub-cmrrb01_space-other_T2star_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-cmrrb01/anat/sub-cmrrb01_space-other_T2star_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:13" + "Date": "2022-10-22 14:36:13", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-cmrrb01/anat/sub-cmrrb01_space-other_T2w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-cmrrb01/anat/sub-cmrrb01_space-other_T2w_desc-softseg_label-SC_seg.json index 97c8d1f4b5..685726716c 100644 --- a/derivatives/labels_softseg_bin/sub-cmrrb01/anat/sub-cmrrb01_space-other_T2w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-cmrrb01/anat/sub-cmrrb01_space-other_T2w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:13" + "Date": "2022-10-22 14:36:13", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-cmrrb02/anat/sub-cmrrb02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-cmrrb02/anat/sub-cmrrb02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json index 97c8d1f4b5..d018bd5322 100644 --- a/derivatives/labels_softseg_bin/sub-cmrrb02/anat/sub-cmrrb02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-cmrrb02/anat/sub-cmrrb02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:13" + "Date": "2022-10-22 14:36:13", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-cmrrb02/anat/sub-cmrrb02_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-cmrrb02/anat/sub-cmrrb02_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json index 97c8d1f4b5..d018bd5322 100644 --- a/derivatives/labels_softseg_bin/sub-cmrrb02/anat/sub-cmrrb02_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-cmrrb02/anat/sub-cmrrb02_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:13" + "Date": "2022-10-22 14:36:13", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-cmrrb02/anat/sub-cmrrb02_space-other_T1w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-cmrrb02/anat/sub-cmrrb02_space-other_T1w_desc-softseg_label-SC_seg.json index 97c8d1f4b5..6de4af4e61 100644 --- a/derivatives/labels_softseg_bin/sub-cmrrb02/anat/sub-cmrrb02_space-other_T1w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-cmrrb02/anat/sub-cmrrb02_space-other_T1w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:13" + "Date": "2022-10-22 14:36:13", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-cmrrb02/anat/sub-cmrrb02_space-other_T2star_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-cmrrb02/anat/sub-cmrrb02_space-other_T2star_desc-softseg_label-SC_seg.json index 97c8d1f4b5..5f5b22f2e4 100644 --- a/derivatives/labels_softseg_bin/sub-cmrrb02/anat/sub-cmrrb02_space-other_T2star_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-cmrrb02/anat/sub-cmrrb02_space-other_T2star_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:13" + "Date": "2022-10-22 14:36:13", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-cmrrb02/anat/sub-cmrrb02_space-other_T2w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-cmrrb02/anat/sub-cmrrb02_space-other_T2w_desc-softseg_label-SC_seg.json index 97c8d1f4b5..685726716c 100644 --- a/derivatives/labels_softseg_bin/sub-cmrrb02/anat/sub-cmrrb02_space-other_T2w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-cmrrb02/anat/sub-cmrrb02_space-other_T2w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:13" + "Date": "2022-10-22 14:36:13", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-cmrrb03/anat/sub-cmrrb03_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-cmrrb03/anat/sub-cmrrb03_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json index 97c8d1f4b5..d018bd5322 100644 --- a/derivatives/labels_softseg_bin/sub-cmrrb03/anat/sub-cmrrb03_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-cmrrb03/anat/sub-cmrrb03_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:13" + "Date": "2022-10-22 14:36:13", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-cmrrb03/anat/sub-cmrrb03_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-cmrrb03/anat/sub-cmrrb03_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json index 97c8d1f4b5..d018bd5322 100644 --- a/derivatives/labels_softseg_bin/sub-cmrrb03/anat/sub-cmrrb03_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-cmrrb03/anat/sub-cmrrb03_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:13" + "Date": "2022-10-22 14:36:13", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-cmrrb03/anat/sub-cmrrb03_space-other_T1w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-cmrrb03/anat/sub-cmrrb03_space-other_T1w_desc-softseg_label-SC_seg.json index 6676a57b56..4b916fbbf0 100644 --- a/derivatives/labels_softseg_bin/sub-cmrrb03/anat/sub-cmrrb03_space-other_T1w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-cmrrb03/anat/sub-cmrrb03_space-other_T1w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:14" + "Date": "2022-10-22 14:36:14", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-cmrrb03/anat/sub-cmrrb03_space-other_T2star_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-cmrrb03/anat/sub-cmrrb03_space-other_T2star_desc-softseg_label-SC_seg.json index 6676a57b56..a2b8bf1f15 100644 --- a/derivatives/labels_softseg_bin/sub-cmrrb03/anat/sub-cmrrb03_space-other_T2star_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-cmrrb03/anat/sub-cmrrb03_space-other_T2star_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:14" + "Date": "2022-10-22 14:36:14", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-cmrrb03/anat/sub-cmrrb03_space-other_T2w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-cmrrb03/anat/sub-cmrrb03_space-other_T2w_desc-softseg_label-SC_seg.json index 6676a57b56..a527f4caa7 100644 --- a/derivatives/labels_softseg_bin/sub-cmrrb03/anat/sub-cmrrb03_space-other_T2w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-cmrrb03/anat/sub-cmrrb03_space-other_T2w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:14" + "Date": "2022-10-22 14:36:14", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-cmrrb04/anat/sub-cmrrb04_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-cmrrb04/anat/sub-cmrrb04_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json index 6676a57b56..f56c694355 100644 --- a/derivatives/labels_softseg_bin/sub-cmrrb04/anat/sub-cmrrb04_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-cmrrb04/anat/sub-cmrrb04_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:14" + "Date": "2022-10-22 14:36:14", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-cmrrb04/anat/sub-cmrrb04_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-cmrrb04/anat/sub-cmrrb04_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json index 6676a57b56..f56c694355 100644 --- a/derivatives/labels_softseg_bin/sub-cmrrb04/anat/sub-cmrrb04_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-cmrrb04/anat/sub-cmrrb04_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:14" + "Date": "2022-10-22 14:36:14", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-cmrrb04/anat/sub-cmrrb04_space-other_T1w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-cmrrb04/anat/sub-cmrrb04_space-other_T1w_desc-softseg_label-SC_seg.json index 6676a57b56..4b916fbbf0 100644 --- a/derivatives/labels_softseg_bin/sub-cmrrb04/anat/sub-cmrrb04_space-other_T1w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-cmrrb04/anat/sub-cmrrb04_space-other_T1w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:14" + "Date": "2022-10-22 14:36:14", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-cmrrb04/anat/sub-cmrrb04_space-other_T2star_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-cmrrb04/anat/sub-cmrrb04_space-other_T2star_desc-softseg_label-SC_seg.json index 6676a57b56..a2b8bf1f15 100644 --- a/derivatives/labels_softseg_bin/sub-cmrrb04/anat/sub-cmrrb04_space-other_T2star_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-cmrrb04/anat/sub-cmrrb04_space-other_T2star_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:14" + "Date": "2022-10-22 14:36:14", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-cmrrb04/anat/sub-cmrrb04_space-other_T2w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-cmrrb04/anat/sub-cmrrb04_space-other_T2w_desc-softseg_label-SC_seg.json index 6676a57b56..a527f4caa7 100644 --- a/derivatives/labels_softseg_bin/sub-cmrrb04/anat/sub-cmrrb04_space-other_T2w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-cmrrb04/anat/sub-cmrrb04_space-other_T2w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:14" + "Date": "2022-10-22 14:36:14", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-cmrrb05/anat/sub-cmrrb05_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-cmrrb05/anat/sub-cmrrb05_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json index 6676a57b56..f56c694355 100644 --- a/derivatives/labels_softseg_bin/sub-cmrrb05/anat/sub-cmrrb05_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-cmrrb05/anat/sub-cmrrb05_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:14" + "Date": "2022-10-22 14:36:14", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-cmrrb05/anat/sub-cmrrb05_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-cmrrb05/anat/sub-cmrrb05_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json index 6676a57b56..f56c694355 100644 --- a/derivatives/labels_softseg_bin/sub-cmrrb05/anat/sub-cmrrb05_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-cmrrb05/anat/sub-cmrrb05_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:14" + "Date": "2022-10-22 14:36:14", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-cmrrb05/anat/sub-cmrrb05_space-other_T1w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-cmrrb05/anat/sub-cmrrb05_space-other_T1w_desc-softseg_label-SC_seg.json index 6676a57b56..4b916fbbf0 100644 --- a/derivatives/labels_softseg_bin/sub-cmrrb05/anat/sub-cmrrb05_space-other_T1w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-cmrrb05/anat/sub-cmrrb05_space-other_T1w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:14" + "Date": "2022-10-22 14:36:14", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-cmrrb05/anat/sub-cmrrb05_space-other_T2star_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-cmrrb05/anat/sub-cmrrb05_space-other_T2star_desc-softseg_label-SC_seg.json index 6676a57b56..a2b8bf1f15 100644 --- a/derivatives/labels_softseg_bin/sub-cmrrb05/anat/sub-cmrrb05_space-other_T2star_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-cmrrb05/anat/sub-cmrrb05_space-other_T2star_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:14" + "Date": "2022-10-22 14:36:14", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-cmrrb05/anat/sub-cmrrb05_space-other_T2w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-cmrrb05/anat/sub-cmrrb05_space-other_T2w_desc-softseg_label-SC_seg.json index 6676a57b56..a527f4caa7 100644 --- a/derivatives/labels_softseg_bin/sub-cmrrb05/anat/sub-cmrrb05_space-other_T2w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-cmrrb05/anat/sub-cmrrb05_space-other_T2w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:14" + "Date": "2022-10-22 14:36:14", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-cmrrb06/anat/sub-cmrrb06_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-cmrrb06/anat/sub-cmrrb06_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json index 6676a57b56..f56c694355 100644 --- a/derivatives/labels_softseg_bin/sub-cmrrb06/anat/sub-cmrrb06_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-cmrrb06/anat/sub-cmrrb06_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:14" + "Date": "2022-10-22 14:36:14", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-cmrrb06/anat/sub-cmrrb06_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-cmrrb06/anat/sub-cmrrb06_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json index 6676a57b56..f56c694355 100644 --- a/derivatives/labels_softseg_bin/sub-cmrrb06/anat/sub-cmrrb06_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-cmrrb06/anat/sub-cmrrb06_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:14" + "Date": "2022-10-22 14:36:14", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-cmrrb06/anat/sub-cmrrb06_space-other_T1w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-cmrrb06/anat/sub-cmrrb06_space-other_T1w_desc-softseg_label-SC_seg.json index 6676a57b56..4b916fbbf0 100644 --- a/derivatives/labels_softseg_bin/sub-cmrrb06/anat/sub-cmrrb06_space-other_T1w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-cmrrb06/anat/sub-cmrrb06_space-other_T1w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:14" + "Date": "2022-10-22 14:36:14", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-cmrrb06/anat/sub-cmrrb06_space-other_T2star_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-cmrrb06/anat/sub-cmrrb06_space-other_T2star_desc-softseg_label-SC_seg.json index 6676a57b56..a2b8bf1f15 100644 --- a/derivatives/labels_softseg_bin/sub-cmrrb06/anat/sub-cmrrb06_space-other_T2star_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-cmrrb06/anat/sub-cmrrb06_space-other_T2star_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:14" + "Date": "2022-10-22 14:36:14", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-cmrrb06/anat/sub-cmrrb06_space-other_T2w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-cmrrb06/anat/sub-cmrrb06_space-other_T2w_desc-softseg_label-SC_seg.json index 6676a57b56..a527f4caa7 100644 --- a/derivatives/labels_softseg_bin/sub-cmrrb06/anat/sub-cmrrb06_space-other_T2w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-cmrrb06/anat/sub-cmrrb06_space-other_T2w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:14" + "Date": "2022-10-22 14:36:14", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-cmrrb07/anat/sub-cmrrb07_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-cmrrb07/anat/sub-cmrrb07_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json index 6676a57b56..f56c694355 100644 --- a/derivatives/labels_softseg_bin/sub-cmrrb07/anat/sub-cmrrb07_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-cmrrb07/anat/sub-cmrrb07_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:14" + "Date": "2022-10-22 14:36:14", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-cmrrb07/anat/sub-cmrrb07_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-cmrrb07/anat/sub-cmrrb07_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json index 6676a57b56..f56c694355 100644 --- a/derivatives/labels_softseg_bin/sub-cmrrb07/anat/sub-cmrrb07_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-cmrrb07/anat/sub-cmrrb07_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:14" + "Date": "2022-10-22 14:36:14", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-cmrrb07/anat/sub-cmrrb07_space-other_T1w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-cmrrb07/anat/sub-cmrrb07_space-other_T1w_desc-softseg_label-SC_seg.json index a5005f8c01..24c413d664 100644 --- a/derivatives/labels_softseg_bin/sub-cmrrb07/anat/sub-cmrrb07_space-other_T1w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-cmrrb07/anat/sub-cmrrb07_space-other_T1w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:15" + "Date": "2022-10-22 14:36:15", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-cmrrb07/anat/sub-cmrrb07_space-other_T2star_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-cmrrb07/anat/sub-cmrrb07_space-other_T2star_desc-softseg_label-SC_seg.json index a5005f8c01..0e4b0dc815 100644 --- a/derivatives/labels_softseg_bin/sub-cmrrb07/anat/sub-cmrrb07_space-other_T2star_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-cmrrb07/anat/sub-cmrrb07_space-other_T2star_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:15" + "Date": "2022-10-22 14:36:15", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-cmrrb07/anat/sub-cmrrb07_space-other_T2w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-cmrrb07/anat/sub-cmrrb07_space-other_T2w_desc-softseg_label-SC_seg.json index a5005f8c01..11c6de13b3 100644 --- a/derivatives/labels_softseg_bin/sub-cmrrb07/anat/sub-cmrrb07_space-other_T2w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-cmrrb07/anat/sub-cmrrb07_space-other_T2w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:15" + "Date": "2022-10-22 14:36:15", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-dresden01/anat/sub-dresden01_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-dresden01/anat/sub-dresden01_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json index a5005f8c01..2ab6ceb113 100644 --- a/derivatives/labels_softseg_bin/sub-dresden01/anat/sub-dresden01_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-dresden01/anat/sub-dresden01_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:15" + "Date": "2022-10-22 14:36:15", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-dresden01/anat/sub-dresden01_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-dresden01/anat/sub-dresden01_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json index a5005f8c01..2ab6ceb113 100644 --- a/derivatives/labels_softseg_bin/sub-dresden01/anat/sub-dresden01_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-dresden01/anat/sub-dresden01_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:15" + "Date": "2022-10-22 14:36:15", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-dresden01/anat/sub-dresden01_space-other_T1w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-dresden01/anat/sub-dresden01_space-other_T1w_desc-softseg_label-SC_seg.json index a5005f8c01..24c413d664 100644 --- a/derivatives/labels_softseg_bin/sub-dresden01/anat/sub-dresden01_space-other_T1w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-dresden01/anat/sub-dresden01_space-other_T1w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:15" + "Date": "2022-10-22 14:36:15", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-dresden01/anat/sub-dresden01_space-other_T2star_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-dresden01/anat/sub-dresden01_space-other_T2star_desc-softseg_label-SC_seg.json index a5005f8c01..0e4b0dc815 100644 --- a/derivatives/labels_softseg_bin/sub-dresden01/anat/sub-dresden01_space-other_T2star_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-dresden01/anat/sub-dresden01_space-other_T2star_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:15" + "Date": "2022-10-22 14:36:15", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-dresden01/anat/sub-dresden01_space-other_T2w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-dresden01/anat/sub-dresden01_space-other_T2w_desc-softseg_label-SC_seg.json index a5005f8c01..11c6de13b3 100644 --- a/derivatives/labels_softseg_bin/sub-dresden01/anat/sub-dresden01_space-other_T2w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-dresden01/anat/sub-dresden01_space-other_T2w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:15" + "Date": "2022-10-22 14:36:15", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-dresden02/anat/sub-dresden02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-dresden02/anat/sub-dresden02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json index a5005f8c01..2ab6ceb113 100644 --- a/derivatives/labels_softseg_bin/sub-dresden02/anat/sub-dresden02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-dresden02/anat/sub-dresden02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:15" + "Date": "2022-10-22 14:36:15", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-dresden02/anat/sub-dresden02_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-dresden02/anat/sub-dresden02_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json index a5005f8c01..2ab6ceb113 100644 --- a/derivatives/labels_softseg_bin/sub-dresden02/anat/sub-dresden02_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-dresden02/anat/sub-dresden02_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:15" + "Date": "2022-10-22 14:36:15", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-dresden02/anat/sub-dresden02_space-other_T1w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-dresden02/anat/sub-dresden02_space-other_T1w_desc-softseg_label-SC_seg.json index a5005f8c01..24c413d664 100644 --- a/derivatives/labels_softseg_bin/sub-dresden02/anat/sub-dresden02_space-other_T1w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-dresden02/anat/sub-dresden02_space-other_T1w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:15" + "Date": "2022-10-22 14:36:15", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-dresden02/anat/sub-dresden02_space-other_T2star_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-dresden02/anat/sub-dresden02_space-other_T2star_desc-softseg_label-SC_seg.json index a5005f8c01..0e4b0dc815 100644 --- a/derivatives/labels_softseg_bin/sub-dresden02/anat/sub-dresden02_space-other_T2star_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-dresden02/anat/sub-dresden02_space-other_T2star_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:15" + "Date": "2022-10-22 14:36:15", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-dresden02/anat/sub-dresden02_space-other_T2w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-dresden02/anat/sub-dresden02_space-other_T2w_desc-softseg_label-SC_seg.json index a5005f8c01..11c6de13b3 100644 --- a/derivatives/labels_softseg_bin/sub-dresden02/anat/sub-dresden02_space-other_T2w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-dresden02/anat/sub-dresden02_space-other_T2w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:15" + "Date": "2022-10-22 14:36:15", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-fslAchieva01/anat/sub-fslAchieva01_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-fslAchieva01/anat/sub-fslAchieva01_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json index a5005f8c01..2ab6ceb113 100644 --- a/derivatives/labels_softseg_bin/sub-fslAchieva01/anat/sub-fslAchieva01_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-fslAchieva01/anat/sub-fslAchieva01_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:15" + "Date": "2022-10-22 14:36:15", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-fslAchieva01/anat/sub-fslAchieva01_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-fslAchieva01/anat/sub-fslAchieva01_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json index a5005f8c01..2ab6ceb113 100644 --- a/derivatives/labels_softseg_bin/sub-fslAchieva01/anat/sub-fslAchieva01_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-fslAchieva01/anat/sub-fslAchieva01_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:15" + "Date": "2022-10-22 14:36:15", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-fslAchieva01/anat/sub-fslAchieva01_space-other_T1w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-fslAchieva01/anat/sub-fslAchieva01_space-other_T1w_desc-softseg_label-SC_seg.json index a5005f8c01..24c413d664 100644 --- a/derivatives/labels_softseg_bin/sub-fslAchieva01/anat/sub-fslAchieva01_space-other_T1w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-fslAchieva01/anat/sub-fslAchieva01_space-other_T1w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:15" + "Date": "2022-10-22 14:36:15", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-fslAchieva01/anat/sub-fslAchieva01_space-other_T2star_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-fslAchieva01/anat/sub-fslAchieva01_space-other_T2star_desc-softseg_label-SC_seg.json index a5005f8c01..0e4b0dc815 100644 --- a/derivatives/labels_softseg_bin/sub-fslAchieva01/anat/sub-fslAchieva01_space-other_T2star_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-fslAchieva01/anat/sub-fslAchieva01_space-other_T2star_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:15" + "Date": "2022-10-22 14:36:15", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-fslAchieva01/anat/sub-fslAchieva01_space-other_T2w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-fslAchieva01/anat/sub-fslAchieva01_space-other_T2w_desc-softseg_label-SC_seg.json index a5005f8c01..11c6de13b3 100644 --- a/derivatives/labels_softseg_bin/sub-fslAchieva01/anat/sub-fslAchieva01_space-other_T2w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-fslAchieva01/anat/sub-fslAchieva01_space-other_T2w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:15" + "Date": "2022-10-22 14:36:15", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-fslAchieva02/anat/sub-fslAchieva02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-fslAchieva02/anat/sub-fslAchieva02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json index a5005f8c01..2ab6ceb113 100644 --- a/derivatives/labels_softseg_bin/sub-fslAchieva02/anat/sub-fslAchieva02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-fslAchieva02/anat/sub-fslAchieva02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:15" + "Date": "2022-10-22 14:36:15", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-fslAchieva02/anat/sub-fslAchieva02_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-fslAchieva02/anat/sub-fslAchieva02_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json index a5005f8c01..2ab6ceb113 100644 --- a/derivatives/labels_softseg_bin/sub-fslAchieva02/anat/sub-fslAchieva02_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-fslAchieva02/anat/sub-fslAchieva02_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:15" + "Date": "2022-10-22 14:36:15", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-fslAchieva02/anat/sub-fslAchieva02_space-other_T1w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-fslAchieva02/anat/sub-fslAchieva02_space-other_T1w_desc-softseg_label-SC_seg.json index 0ca96228a3..cc6819b606 100644 --- a/derivatives/labels_softseg_bin/sub-fslAchieva02/anat/sub-fslAchieva02_space-other_T1w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-fslAchieva02/anat/sub-fslAchieva02_space-other_T1w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:16" + "Date": "2022-10-22 14:36:16", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-fslAchieva02/anat/sub-fslAchieva02_space-other_T2star_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-fslAchieva02/anat/sub-fslAchieva02_space-other_T2star_desc-softseg_label-SC_seg.json index 0ca96228a3..8c55da5a5b 100644 --- a/derivatives/labels_softseg_bin/sub-fslAchieva02/anat/sub-fslAchieva02_space-other_T2star_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-fslAchieva02/anat/sub-fslAchieva02_space-other_T2star_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:16" + "Date": "2022-10-22 14:36:16", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-fslAchieva02/anat/sub-fslAchieva02_space-other_T2w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-fslAchieva02/anat/sub-fslAchieva02_space-other_T2w_desc-softseg_label-SC_seg.json index 0ca96228a3..d9d606bdfb 100644 --- a/derivatives/labels_softseg_bin/sub-fslAchieva02/anat/sub-fslAchieva02_space-other_T2w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-fslAchieva02/anat/sub-fslAchieva02_space-other_T2w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:16" + "Date": "2022-10-22 14:36:16", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-fslAchieva03/anat/sub-fslAchieva03_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-fslAchieva03/anat/sub-fslAchieva03_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json index 0ca96228a3..6157a25edf 100644 --- a/derivatives/labels_softseg_bin/sub-fslAchieva03/anat/sub-fslAchieva03_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-fslAchieva03/anat/sub-fslAchieva03_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:16" + "Date": "2022-10-22 14:36:16", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-fslAchieva03/anat/sub-fslAchieva03_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-fslAchieva03/anat/sub-fslAchieva03_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json index 0ca96228a3..6157a25edf 100644 --- a/derivatives/labels_softseg_bin/sub-fslAchieva03/anat/sub-fslAchieva03_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-fslAchieva03/anat/sub-fslAchieva03_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:16" + "Date": "2022-10-22 14:36:16", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-fslAchieva03/anat/sub-fslAchieva03_space-other_T1w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-fslAchieva03/anat/sub-fslAchieva03_space-other_T1w_desc-softseg_label-SC_seg.json index 0ca96228a3..cc6819b606 100644 --- a/derivatives/labels_softseg_bin/sub-fslAchieva03/anat/sub-fslAchieva03_space-other_T1w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-fslAchieva03/anat/sub-fslAchieva03_space-other_T1w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:16" + "Date": "2022-10-22 14:36:16", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-fslAchieva03/anat/sub-fslAchieva03_space-other_T2star_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-fslAchieva03/anat/sub-fslAchieva03_space-other_T2star_desc-softseg_label-SC_seg.json index 0ca96228a3..8c55da5a5b 100644 --- a/derivatives/labels_softseg_bin/sub-fslAchieva03/anat/sub-fslAchieva03_space-other_T2star_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-fslAchieva03/anat/sub-fslAchieva03_space-other_T2star_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:16" + "Date": "2022-10-22 14:36:16", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-fslAchieva03/anat/sub-fslAchieva03_space-other_T2w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-fslAchieva03/anat/sub-fslAchieva03_space-other_T2w_desc-softseg_label-SC_seg.json index 0ca96228a3..d9d606bdfb 100644 --- a/derivatives/labels_softseg_bin/sub-fslAchieva03/anat/sub-fslAchieva03_space-other_T2w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-fslAchieva03/anat/sub-fslAchieva03_space-other_T2w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:16" + "Date": "2022-10-22 14:36:16", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-fslAchieva04/anat/sub-fslAchieva04_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-fslAchieva04/anat/sub-fslAchieva04_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json index 0ca96228a3..6157a25edf 100644 --- a/derivatives/labels_softseg_bin/sub-fslAchieva04/anat/sub-fslAchieva04_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-fslAchieva04/anat/sub-fslAchieva04_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:16" + "Date": "2022-10-22 14:36:16", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-fslAchieva04/anat/sub-fslAchieva04_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-fslAchieva04/anat/sub-fslAchieva04_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json index 0ca96228a3..6157a25edf 100644 --- a/derivatives/labels_softseg_bin/sub-fslAchieva04/anat/sub-fslAchieva04_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-fslAchieva04/anat/sub-fslAchieva04_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:16" + "Date": "2022-10-22 14:36:16", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-fslAchieva04/anat/sub-fslAchieva04_space-other_T1w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-fslAchieva04/anat/sub-fslAchieva04_space-other_T1w_desc-softseg_label-SC_seg.json index 0ca96228a3..cc6819b606 100644 --- a/derivatives/labels_softseg_bin/sub-fslAchieva04/anat/sub-fslAchieva04_space-other_T1w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-fslAchieva04/anat/sub-fslAchieva04_space-other_T1w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:16" + "Date": "2022-10-22 14:36:16", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-fslAchieva04/anat/sub-fslAchieva04_space-other_T2star_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-fslAchieva04/anat/sub-fslAchieva04_space-other_T2star_desc-softseg_label-SC_seg.json index 0ca96228a3..8c55da5a5b 100644 --- a/derivatives/labels_softseg_bin/sub-fslAchieva04/anat/sub-fslAchieva04_space-other_T2star_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-fslAchieva04/anat/sub-fslAchieva04_space-other_T2star_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:16" + "Date": "2022-10-22 14:36:16", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-fslAchieva04/anat/sub-fslAchieva04_space-other_T2w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-fslAchieva04/anat/sub-fslAchieva04_space-other_T2w_desc-softseg_label-SC_seg.json index 0ca96228a3..d9d606bdfb 100644 --- a/derivatives/labels_softseg_bin/sub-fslAchieva04/anat/sub-fslAchieva04_space-other_T2w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-fslAchieva04/anat/sub-fslAchieva04_space-other_T2w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:16" + "Date": "2022-10-22 14:36:16", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-fslAchieva05/anat/sub-fslAchieva05_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-fslAchieva05/anat/sub-fslAchieva05_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json index 0ca96228a3..6157a25edf 100644 --- a/derivatives/labels_softseg_bin/sub-fslAchieva05/anat/sub-fslAchieva05_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-fslAchieva05/anat/sub-fslAchieva05_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:16" + "Date": "2022-10-22 14:36:16", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-fslAchieva05/anat/sub-fslAchieva05_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-fslAchieva05/anat/sub-fslAchieva05_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json index 0ca96228a3..6157a25edf 100644 --- a/derivatives/labels_softseg_bin/sub-fslAchieva05/anat/sub-fslAchieva05_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-fslAchieva05/anat/sub-fslAchieva05_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:16" + "Date": "2022-10-22 14:36:16", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-fslAchieva05/anat/sub-fslAchieva05_space-other_T1w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-fslAchieva05/anat/sub-fslAchieva05_space-other_T1w_desc-softseg_label-SC_seg.json index 0ca96228a3..cc6819b606 100644 --- a/derivatives/labels_softseg_bin/sub-fslAchieva05/anat/sub-fslAchieva05_space-other_T1w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-fslAchieva05/anat/sub-fslAchieva05_space-other_T1w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:16" + "Date": "2022-10-22 14:36:16", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-fslAchieva05/anat/sub-fslAchieva05_space-other_T2star_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-fslAchieva05/anat/sub-fslAchieva05_space-other_T2star_desc-softseg_label-SC_seg.json index 0ca96228a3..8c55da5a5b 100644 --- a/derivatives/labels_softseg_bin/sub-fslAchieva05/anat/sub-fslAchieva05_space-other_T2star_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-fslAchieva05/anat/sub-fslAchieva05_space-other_T2star_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:16" + "Date": "2022-10-22 14:36:16", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-fslAchieva05/anat/sub-fslAchieva05_space-other_T2w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-fslAchieva05/anat/sub-fslAchieva05_space-other_T2w_desc-softseg_label-SC_seg.json index 0ca96228a3..d9d606bdfb 100644 --- a/derivatives/labels_softseg_bin/sub-fslAchieva05/anat/sub-fslAchieva05_space-other_T2w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-fslAchieva05/anat/sub-fslAchieva05_space-other_T2w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:16" + "Date": "2022-10-22 14:36:16", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-fslAchieva06/anat/sub-fslAchieva06_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-fslAchieva06/anat/sub-fslAchieva06_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json index 0ca96228a3..6157a25edf 100644 --- a/derivatives/labels_softseg_bin/sub-fslAchieva06/anat/sub-fslAchieva06_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-fslAchieva06/anat/sub-fslAchieva06_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:16" + "Date": "2022-10-22 14:36:16", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-fslAchieva06/anat/sub-fslAchieva06_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-fslAchieva06/anat/sub-fslAchieva06_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json index 0ca96228a3..6157a25edf 100644 --- a/derivatives/labels_softseg_bin/sub-fslAchieva06/anat/sub-fslAchieva06_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-fslAchieva06/anat/sub-fslAchieva06_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:16" + "Date": "2022-10-22 14:36:16", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-fslAchieva06/anat/sub-fslAchieva06_space-other_T1w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-fslAchieva06/anat/sub-fslAchieva06_space-other_T1w_desc-softseg_label-SC_seg.json index 0ca96228a3..cc6819b606 100644 --- a/derivatives/labels_softseg_bin/sub-fslAchieva06/anat/sub-fslAchieva06_space-other_T1w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-fslAchieva06/anat/sub-fslAchieva06_space-other_T1w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:16" + "Date": "2022-10-22 14:36:16", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-fslAchieva06/anat/sub-fslAchieva06_space-other_T2star_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-fslAchieva06/anat/sub-fslAchieva06_space-other_T2star_desc-softseg_label-SC_seg.json index c53db7f5dd..85ff7f8eab 100644 --- a/derivatives/labels_softseg_bin/sub-fslAchieva06/anat/sub-fslAchieva06_space-other_T2star_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-fslAchieva06/anat/sub-fslAchieva06_space-other_T2star_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:17" + "Date": "2022-10-22 14:36:17", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-fslAchieva06/anat/sub-fslAchieva06_space-other_T2w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-fslAchieva06/anat/sub-fslAchieva06_space-other_T2w_desc-softseg_label-SC_seg.json index c53db7f5dd..8d15be0889 100644 --- a/derivatives/labels_softseg_bin/sub-fslAchieva06/anat/sub-fslAchieva06_space-other_T2w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-fslAchieva06/anat/sub-fslAchieva06_space-other_T2w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:17" + "Date": "2022-10-22 14:36:17", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-fslPrisma01/anat/sub-fslPrisma01_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-fslPrisma01/anat/sub-fslPrisma01_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json index c53db7f5dd..506bbdcda7 100644 --- a/derivatives/labels_softseg_bin/sub-fslPrisma01/anat/sub-fslPrisma01_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-fslPrisma01/anat/sub-fslPrisma01_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:17" + "Date": "2022-10-22 14:36:17", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-fslPrisma01/anat/sub-fslPrisma01_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-fslPrisma01/anat/sub-fslPrisma01_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json index c53db7f5dd..506bbdcda7 100644 --- a/derivatives/labels_softseg_bin/sub-fslPrisma01/anat/sub-fslPrisma01_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-fslPrisma01/anat/sub-fslPrisma01_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:17" + "Date": "2022-10-22 14:36:17", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-fslPrisma01/anat/sub-fslPrisma01_space-other_T1w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-fslPrisma01/anat/sub-fslPrisma01_space-other_T1w_desc-softseg_label-SC_seg.json index c53db7f5dd..34e844bd32 100644 --- a/derivatives/labels_softseg_bin/sub-fslPrisma01/anat/sub-fslPrisma01_space-other_T1w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-fslPrisma01/anat/sub-fslPrisma01_space-other_T1w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:17" + "Date": "2022-10-22 14:36:17", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-fslPrisma01/anat/sub-fslPrisma01_space-other_T2star_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-fslPrisma01/anat/sub-fslPrisma01_space-other_T2star_desc-softseg_label-SC_seg.json index c53db7f5dd..85ff7f8eab 100644 --- a/derivatives/labels_softseg_bin/sub-fslPrisma01/anat/sub-fslPrisma01_space-other_T2star_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-fslPrisma01/anat/sub-fslPrisma01_space-other_T2star_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:17" + "Date": "2022-10-22 14:36:17", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-fslPrisma01/anat/sub-fslPrisma01_space-other_T2w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-fslPrisma01/anat/sub-fslPrisma01_space-other_T2w_desc-softseg_label-SC_seg.json index c53db7f5dd..8d15be0889 100644 --- a/derivatives/labels_softseg_bin/sub-fslPrisma01/anat/sub-fslPrisma01_space-other_T2w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-fslPrisma01/anat/sub-fslPrisma01_space-other_T2w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:17" + "Date": "2022-10-22 14:36:17", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-fslPrisma02/anat/sub-fslPrisma02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-fslPrisma02/anat/sub-fslPrisma02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json index c53db7f5dd..506bbdcda7 100644 --- a/derivatives/labels_softseg_bin/sub-fslPrisma02/anat/sub-fslPrisma02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-fslPrisma02/anat/sub-fslPrisma02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:17" + "Date": "2022-10-22 14:36:17", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-fslPrisma02/anat/sub-fslPrisma02_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-fslPrisma02/anat/sub-fslPrisma02_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json index c53db7f5dd..506bbdcda7 100644 --- a/derivatives/labels_softseg_bin/sub-fslPrisma02/anat/sub-fslPrisma02_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-fslPrisma02/anat/sub-fslPrisma02_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:17" + "Date": "2022-10-22 14:36:17", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-fslPrisma02/anat/sub-fslPrisma02_space-other_T1w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-fslPrisma02/anat/sub-fslPrisma02_space-other_T1w_desc-softseg_label-SC_seg.json index c53db7f5dd..34e844bd32 100644 --- a/derivatives/labels_softseg_bin/sub-fslPrisma02/anat/sub-fslPrisma02_space-other_T1w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-fslPrisma02/anat/sub-fslPrisma02_space-other_T1w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:17" + "Date": "2022-10-22 14:36:17", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-fslPrisma02/anat/sub-fslPrisma02_space-other_T2star_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-fslPrisma02/anat/sub-fslPrisma02_space-other_T2star_desc-softseg_label-SC_seg.json index c53db7f5dd..85ff7f8eab 100644 --- a/derivatives/labels_softseg_bin/sub-fslPrisma02/anat/sub-fslPrisma02_space-other_T2star_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-fslPrisma02/anat/sub-fslPrisma02_space-other_T2star_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:17" + "Date": "2022-10-22 14:36:17", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-fslPrisma02/anat/sub-fslPrisma02_space-other_T2w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-fslPrisma02/anat/sub-fslPrisma02_space-other_T2w_desc-softseg_label-SC_seg.json index c53db7f5dd..8d15be0889 100644 --- a/derivatives/labels_softseg_bin/sub-fslPrisma02/anat/sub-fslPrisma02_space-other_T2w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-fslPrisma02/anat/sub-fslPrisma02_space-other_T2w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:17" + "Date": "2022-10-22 14:36:17", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-fslPrisma03/anat/sub-fslPrisma03_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-fslPrisma03/anat/sub-fslPrisma03_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json index c53db7f5dd..506bbdcda7 100644 --- a/derivatives/labels_softseg_bin/sub-fslPrisma03/anat/sub-fslPrisma03_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-fslPrisma03/anat/sub-fslPrisma03_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:17" + "Date": "2022-10-22 14:36:17", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-fslPrisma03/anat/sub-fslPrisma03_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-fslPrisma03/anat/sub-fslPrisma03_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json index c53db7f5dd..506bbdcda7 100644 --- a/derivatives/labels_softseg_bin/sub-fslPrisma03/anat/sub-fslPrisma03_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-fslPrisma03/anat/sub-fslPrisma03_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:17" + "Date": "2022-10-22 14:36:17", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-fslPrisma03/anat/sub-fslPrisma03_space-other_T1w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-fslPrisma03/anat/sub-fslPrisma03_space-other_T1w_desc-softseg_label-SC_seg.json index c53db7f5dd..34e844bd32 100644 --- a/derivatives/labels_softseg_bin/sub-fslPrisma03/anat/sub-fslPrisma03_space-other_T1w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-fslPrisma03/anat/sub-fslPrisma03_space-other_T1w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:17" + "Date": "2022-10-22 14:36:17", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-fslPrisma03/anat/sub-fslPrisma03_space-other_T2star_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-fslPrisma03/anat/sub-fslPrisma03_space-other_T2star_desc-softseg_label-SC_seg.json index c53db7f5dd..85ff7f8eab 100644 --- a/derivatives/labels_softseg_bin/sub-fslPrisma03/anat/sub-fslPrisma03_space-other_T2star_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-fslPrisma03/anat/sub-fslPrisma03_space-other_T2star_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:17" + "Date": "2022-10-22 14:36:17", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-fslPrisma03/anat/sub-fslPrisma03_space-other_T2w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-fslPrisma03/anat/sub-fslPrisma03_space-other_T2w_desc-softseg_label-SC_seg.json index c53db7f5dd..8d15be0889 100644 --- a/derivatives/labels_softseg_bin/sub-fslPrisma03/anat/sub-fslPrisma03_space-other_T2w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-fslPrisma03/anat/sub-fslPrisma03_space-other_T2w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:17" + "Date": "2022-10-22 14:36:17", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-fslPrisma04/anat/sub-fslPrisma04_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-fslPrisma04/anat/sub-fslPrisma04_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json index c53db7f5dd..506bbdcda7 100644 --- a/derivatives/labels_softseg_bin/sub-fslPrisma04/anat/sub-fslPrisma04_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-fslPrisma04/anat/sub-fslPrisma04_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:17" + "Date": "2022-10-22 14:36:17", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-fslPrisma04/anat/sub-fslPrisma04_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-fslPrisma04/anat/sub-fslPrisma04_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json index c53db7f5dd..506bbdcda7 100644 --- a/derivatives/labels_softseg_bin/sub-fslPrisma04/anat/sub-fslPrisma04_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-fslPrisma04/anat/sub-fslPrisma04_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:17" + "Date": "2022-10-22 14:36:17", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-fslPrisma04/anat/sub-fslPrisma04_space-other_T1w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-fslPrisma04/anat/sub-fslPrisma04_space-other_T1w_desc-softseg_label-SC_seg.json index c53db7f5dd..34e844bd32 100644 --- a/derivatives/labels_softseg_bin/sub-fslPrisma04/anat/sub-fslPrisma04_space-other_T1w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-fslPrisma04/anat/sub-fslPrisma04_space-other_T1w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:17" + "Date": "2022-10-22 14:36:17", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-fslPrisma04/anat/sub-fslPrisma04_space-other_T2star_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-fslPrisma04/anat/sub-fslPrisma04_space-other_T2star_desc-softseg_label-SC_seg.json index 6424c14179..b9bf6dfac2 100644 --- a/derivatives/labels_softseg_bin/sub-fslPrisma04/anat/sub-fslPrisma04_space-other_T2star_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-fslPrisma04/anat/sub-fslPrisma04_space-other_T2star_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:18" + "Date": "2022-10-22 14:36:18", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-fslPrisma04/anat/sub-fslPrisma04_space-other_T2w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-fslPrisma04/anat/sub-fslPrisma04_space-other_T2w_desc-softseg_label-SC_seg.json index 6424c14179..b521d7f189 100644 --- a/derivatives/labels_softseg_bin/sub-fslPrisma04/anat/sub-fslPrisma04_space-other_T2w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-fslPrisma04/anat/sub-fslPrisma04_space-other_T2w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:18" + "Date": "2022-10-22 14:36:18", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-fslPrisma05/anat/sub-fslPrisma05_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-fslPrisma05/anat/sub-fslPrisma05_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json index 6424c14179..33c9f460b2 100644 --- a/derivatives/labels_softseg_bin/sub-fslPrisma05/anat/sub-fslPrisma05_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-fslPrisma05/anat/sub-fslPrisma05_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:18" + "Date": "2022-10-22 14:36:18", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-fslPrisma05/anat/sub-fslPrisma05_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-fslPrisma05/anat/sub-fslPrisma05_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json index 6424c14179..33c9f460b2 100644 --- a/derivatives/labels_softseg_bin/sub-fslPrisma05/anat/sub-fslPrisma05_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-fslPrisma05/anat/sub-fslPrisma05_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:18" + "Date": "2022-10-22 14:36:18", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-fslPrisma05/anat/sub-fslPrisma05_space-other_T1w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-fslPrisma05/anat/sub-fslPrisma05_space-other_T1w_desc-softseg_label-SC_seg.json index 6424c14179..e597ead11c 100644 --- a/derivatives/labels_softseg_bin/sub-fslPrisma05/anat/sub-fslPrisma05_space-other_T1w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-fslPrisma05/anat/sub-fslPrisma05_space-other_T1w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:18" + "Date": "2022-10-22 14:36:18", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-fslPrisma05/anat/sub-fslPrisma05_space-other_T2star_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-fslPrisma05/anat/sub-fslPrisma05_space-other_T2star_desc-softseg_label-SC_seg.json index 6424c14179..b9bf6dfac2 100644 --- a/derivatives/labels_softseg_bin/sub-fslPrisma05/anat/sub-fslPrisma05_space-other_T2star_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-fslPrisma05/anat/sub-fslPrisma05_space-other_T2star_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:18" + "Date": "2022-10-22 14:36:18", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-fslPrisma05/anat/sub-fslPrisma05_space-other_T2w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-fslPrisma05/anat/sub-fslPrisma05_space-other_T2w_desc-softseg_label-SC_seg.json index 6424c14179..b521d7f189 100644 --- a/derivatives/labels_softseg_bin/sub-fslPrisma05/anat/sub-fslPrisma05_space-other_T2w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-fslPrisma05/anat/sub-fslPrisma05_space-other_T2w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:18" + "Date": "2022-10-22 14:36:18", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-fslPrisma06/anat/sub-fslPrisma06_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-fslPrisma06/anat/sub-fslPrisma06_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json index 6424c14179..33c9f460b2 100644 --- a/derivatives/labels_softseg_bin/sub-fslPrisma06/anat/sub-fslPrisma06_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-fslPrisma06/anat/sub-fslPrisma06_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:18" + "Date": "2022-10-22 14:36:18", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-fslPrisma06/anat/sub-fslPrisma06_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-fslPrisma06/anat/sub-fslPrisma06_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json index 6424c14179..33c9f460b2 100644 --- a/derivatives/labels_softseg_bin/sub-fslPrisma06/anat/sub-fslPrisma06_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-fslPrisma06/anat/sub-fslPrisma06_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:18" + "Date": "2022-10-22 14:36:18", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-fslPrisma06/anat/sub-fslPrisma06_space-other_T1w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-fslPrisma06/anat/sub-fslPrisma06_space-other_T1w_desc-softseg_label-SC_seg.json index 6424c14179..e597ead11c 100644 --- a/derivatives/labels_softseg_bin/sub-fslPrisma06/anat/sub-fslPrisma06_space-other_T1w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-fslPrisma06/anat/sub-fslPrisma06_space-other_T1w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:18" + "Date": "2022-10-22 14:36:18", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-fslPrisma06/anat/sub-fslPrisma06_space-other_T2star_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-fslPrisma06/anat/sub-fslPrisma06_space-other_T2star_desc-softseg_label-SC_seg.json index 6424c14179..b9bf6dfac2 100644 --- a/derivatives/labels_softseg_bin/sub-fslPrisma06/anat/sub-fslPrisma06_space-other_T2star_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-fslPrisma06/anat/sub-fslPrisma06_space-other_T2star_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:18" + "Date": "2022-10-22 14:36:18", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-fslPrisma06/anat/sub-fslPrisma06_space-other_T2w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-fslPrisma06/anat/sub-fslPrisma06_space-other_T2w_desc-softseg_label-SC_seg.json index 6424c14179..b521d7f189 100644 --- a/derivatives/labels_softseg_bin/sub-fslPrisma06/anat/sub-fslPrisma06_space-other_T2w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-fslPrisma06/anat/sub-fslPrisma06_space-other_T2w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:18" + "Date": "2022-10-22 14:36:18", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-geneva01/anat/sub-geneva01_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-geneva01/anat/sub-geneva01_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json index 6424c14179..33c9f460b2 100644 --- a/derivatives/labels_softseg_bin/sub-geneva01/anat/sub-geneva01_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-geneva01/anat/sub-geneva01_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:18" + "Date": "2022-10-22 14:36:18", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-geneva01/anat/sub-geneva01_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-geneva01/anat/sub-geneva01_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json index 6424c14179..33c9f460b2 100644 --- a/derivatives/labels_softseg_bin/sub-geneva01/anat/sub-geneva01_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-geneva01/anat/sub-geneva01_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:18" + "Date": "2022-10-22 14:36:18", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-geneva01/anat/sub-geneva01_space-other_T1w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-geneva01/anat/sub-geneva01_space-other_T1w_desc-softseg_label-SC_seg.json index 6424c14179..e597ead11c 100644 --- a/derivatives/labels_softseg_bin/sub-geneva01/anat/sub-geneva01_space-other_T1w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-geneva01/anat/sub-geneva01_space-other_T1w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:18" + "Date": "2022-10-22 14:36:18", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-geneva01/anat/sub-geneva01_space-other_T2star_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-geneva01/anat/sub-geneva01_space-other_T2star_desc-softseg_label-SC_seg.json index 6424c14179..b9bf6dfac2 100644 --- a/derivatives/labels_softseg_bin/sub-geneva01/anat/sub-geneva01_space-other_T2star_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-geneva01/anat/sub-geneva01_space-other_T2star_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:18" + "Date": "2022-10-22 14:36:18", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-geneva01/anat/sub-geneva01_space-other_T2w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-geneva01/anat/sub-geneva01_space-other_T2w_desc-softseg_label-SC_seg.json index 6424c14179..b521d7f189 100644 --- a/derivatives/labels_softseg_bin/sub-geneva01/anat/sub-geneva01_space-other_T2w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-geneva01/anat/sub-geneva01_space-other_T2w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:18" + "Date": "2022-10-22 14:36:18", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-geneva02/anat/sub-geneva02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-geneva02/anat/sub-geneva02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json index 6424c14179..33c9f460b2 100644 --- a/derivatives/labels_softseg_bin/sub-geneva02/anat/sub-geneva02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-geneva02/anat/sub-geneva02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:18" + "Date": "2022-10-22 14:36:18", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-geneva02/anat/sub-geneva02_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-geneva02/anat/sub-geneva02_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json index 6424c14179..33c9f460b2 100644 --- a/derivatives/labels_softseg_bin/sub-geneva02/anat/sub-geneva02_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-geneva02/anat/sub-geneva02_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:18" + "Date": "2022-10-22 14:36:18", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-geneva02/anat/sub-geneva02_space-other_T1w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-geneva02/anat/sub-geneva02_space-other_T1w_desc-softseg_label-SC_seg.json index 0342cc4364..bac062ea43 100644 --- a/derivatives/labels_softseg_bin/sub-geneva02/anat/sub-geneva02_space-other_T1w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-geneva02/anat/sub-geneva02_space-other_T1w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:19" + "Date": "2022-10-22 14:36:19", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-geneva02/anat/sub-geneva02_space-other_T2star_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-geneva02/anat/sub-geneva02_space-other_T2star_desc-softseg_label-SC_seg.json index 0342cc4364..a318198c78 100644 --- a/derivatives/labels_softseg_bin/sub-geneva02/anat/sub-geneva02_space-other_T2star_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-geneva02/anat/sub-geneva02_space-other_T2star_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:19" + "Date": "2022-10-22 14:36:19", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-geneva02/anat/sub-geneva02_space-other_T2w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-geneva02/anat/sub-geneva02_space-other_T2w_desc-softseg_label-SC_seg.json index 0342cc4364..7e28c4cda8 100644 --- a/derivatives/labels_softseg_bin/sub-geneva02/anat/sub-geneva02_space-other_T2w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-geneva02/anat/sub-geneva02_space-other_T2w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:19" + "Date": "2022-10-22 14:36:19", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-geneva03/anat/sub-geneva03_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-geneva03/anat/sub-geneva03_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json index 0342cc4364..a74875a7d8 100644 --- a/derivatives/labels_softseg_bin/sub-geneva03/anat/sub-geneva03_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-geneva03/anat/sub-geneva03_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:19" + "Date": "2022-10-22 14:36:19", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-geneva03/anat/sub-geneva03_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-geneva03/anat/sub-geneva03_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json index 0342cc4364..a74875a7d8 100644 --- a/derivatives/labels_softseg_bin/sub-geneva03/anat/sub-geneva03_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-geneva03/anat/sub-geneva03_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:19" + "Date": "2022-10-22 14:36:19", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-geneva03/anat/sub-geneva03_space-other_T1w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-geneva03/anat/sub-geneva03_space-other_T1w_desc-softseg_label-SC_seg.json index 0342cc4364..bac062ea43 100644 --- a/derivatives/labels_softseg_bin/sub-geneva03/anat/sub-geneva03_space-other_T1w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-geneva03/anat/sub-geneva03_space-other_T1w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:19" + "Date": "2022-10-22 14:36:19", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-geneva03/anat/sub-geneva03_space-other_T2star_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-geneva03/anat/sub-geneva03_space-other_T2star_desc-softseg_label-SC_seg.json index 0342cc4364..a318198c78 100644 --- a/derivatives/labels_softseg_bin/sub-geneva03/anat/sub-geneva03_space-other_T2star_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-geneva03/anat/sub-geneva03_space-other_T2star_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:19" + "Date": "2022-10-22 14:36:19", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-geneva03/anat/sub-geneva03_space-other_T2w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-geneva03/anat/sub-geneva03_space-other_T2w_desc-softseg_label-SC_seg.json index 0342cc4364..7e28c4cda8 100644 --- a/derivatives/labels_softseg_bin/sub-geneva03/anat/sub-geneva03_space-other_T2w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-geneva03/anat/sub-geneva03_space-other_T2w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:19" + "Date": "2022-10-22 14:36:19", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-geneva04/anat/sub-geneva04_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-geneva04/anat/sub-geneva04_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json index 0342cc4364..a74875a7d8 100644 --- a/derivatives/labels_softseg_bin/sub-geneva04/anat/sub-geneva04_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-geneva04/anat/sub-geneva04_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:19" + "Date": "2022-10-22 14:36:19", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-geneva04/anat/sub-geneva04_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-geneva04/anat/sub-geneva04_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json index 0342cc4364..a74875a7d8 100644 --- a/derivatives/labels_softseg_bin/sub-geneva04/anat/sub-geneva04_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-geneva04/anat/sub-geneva04_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:19" + "Date": "2022-10-22 14:36:19", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-geneva04/anat/sub-geneva04_space-other_T1w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-geneva04/anat/sub-geneva04_space-other_T1w_desc-softseg_label-SC_seg.json index 0342cc4364..bac062ea43 100644 --- a/derivatives/labels_softseg_bin/sub-geneva04/anat/sub-geneva04_space-other_T1w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-geneva04/anat/sub-geneva04_space-other_T1w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:19" + "Date": "2022-10-22 14:36:19", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-geneva04/anat/sub-geneva04_space-other_T2star_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-geneva04/anat/sub-geneva04_space-other_T2star_desc-softseg_label-SC_seg.json index 0342cc4364..a318198c78 100644 --- a/derivatives/labels_softseg_bin/sub-geneva04/anat/sub-geneva04_space-other_T2star_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-geneva04/anat/sub-geneva04_space-other_T2star_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:19" + "Date": "2022-10-22 14:36:19", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-geneva04/anat/sub-geneva04_space-other_T2w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-geneva04/anat/sub-geneva04_space-other_T2w_desc-softseg_label-SC_seg.json index 0342cc4364..7e28c4cda8 100644 --- a/derivatives/labels_softseg_bin/sub-geneva04/anat/sub-geneva04_space-other_T2w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-geneva04/anat/sub-geneva04_space-other_T2w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:19" + "Date": "2022-10-22 14:36:19", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-geneva05/anat/sub-geneva05_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-geneva05/anat/sub-geneva05_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json index 0342cc4364..a74875a7d8 100644 --- a/derivatives/labels_softseg_bin/sub-geneva05/anat/sub-geneva05_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-geneva05/anat/sub-geneva05_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:19" + "Date": "2022-10-22 14:36:19", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-geneva05/anat/sub-geneva05_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-geneva05/anat/sub-geneva05_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json index 0342cc4364..a74875a7d8 100644 --- a/derivatives/labels_softseg_bin/sub-geneva05/anat/sub-geneva05_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-geneva05/anat/sub-geneva05_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:19" + "Date": "2022-10-22 14:36:19", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-geneva05/anat/sub-geneva05_space-other_T1w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-geneva05/anat/sub-geneva05_space-other_T1w_desc-softseg_label-SC_seg.json index 0342cc4364..bac062ea43 100644 --- a/derivatives/labels_softseg_bin/sub-geneva05/anat/sub-geneva05_space-other_T1w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-geneva05/anat/sub-geneva05_space-other_T1w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:19" + "Date": "2022-10-22 14:36:19", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-geneva05/anat/sub-geneva05_space-other_T2star_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-geneva05/anat/sub-geneva05_space-other_T2star_desc-softseg_label-SC_seg.json index 0342cc4364..a318198c78 100644 --- a/derivatives/labels_softseg_bin/sub-geneva05/anat/sub-geneva05_space-other_T2star_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-geneva05/anat/sub-geneva05_space-other_T2star_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:19" + "Date": "2022-10-22 14:36:19", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-geneva05/anat/sub-geneva05_space-other_T2w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-geneva05/anat/sub-geneva05_space-other_T2w_desc-softseg_label-SC_seg.json index 0342cc4364..7e28c4cda8 100644 --- a/derivatives/labels_softseg_bin/sub-geneva05/anat/sub-geneva05_space-other_T2w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-geneva05/anat/sub-geneva05_space-other_T2w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:19" + "Date": "2022-10-22 14:36:19", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-geneva06/anat/sub-geneva06_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-geneva06/anat/sub-geneva06_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json index 7427cbcb5a..336a638137 100644 --- a/derivatives/labels_softseg_bin/sub-geneva06/anat/sub-geneva06_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-geneva06/anat/sub-geneva06_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:20" + "Date": "2022-10-22 14:36:20", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-geneva06/anat/sub-geneva06_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-geneva06/anat/sub-geneva06_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json index 7427cbcb5a..336a638137 100644 --- a/derivatives/labels_softseg_bin/sub-geneva06/anat/sub-geneva06_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-geneva06/anat/sub-geneva06_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:20" + "Date": "2022-10-22 14:36:20", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-geneva06/anat/sub-geneva06_space-other_T1w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-geneva06/anat/sub-geneva06_space-other_T1w_desc-softseg_label-SC_seg.json index 7427cbcb5a..bdcc7d2c78 100644 --- a/derivatives/labels_softseg_bin/sub-geneva06/anat/sub-geneva06_space-other_T1w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-geneva06/anat/sub-geneva06_space-other_T1w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:20" + "Date": "2022-10-22 14:36:20", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-geneva06/anat/sub-geneva06_space-other_T2star_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-geneva06/anat/sub-geneva06_space-other_T2star_desc-softseg_label-SC_seg.json index 7427cbcb5a..87f239f56d 100644 --- a/derivatives/labels_softseg_bin/sub-geneva06/anat/sub-geneva06_space-other_T2star_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-geneva06/anat/sub-geneva06_space-other_T2star_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:20" + "Date": "2022-10-22 14:36:20", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-geneva06/anat/sub-geneva06_space-other_T2w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-geneva06/anat/sub-geneva06_space-other_T2w_desc-softseg_label-SC_seg.json index 7427cbcb5a..468fcc1c83 100644 --- a/derivatives/labels_softseg_bin/sub-geneva06/anat/sub-geneva06_space-other_T2w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-geneva06/anat/sub-geneva06_space-other_T2w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:20" + "Date": "2022-10-22 14:36:20", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-hamburg01/anat/sub-hamburg01_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-hamburg01/anat/sub-hamburg01_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json index 7427cbcb5a..336a638137 100644 --- a/derivatives/labels_softseg_bin/sub-hamburg01/anat/sub-hamburg01_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-hamburg01/anat/sub-hamburg01_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:20" + "Date": "2022-10-22 14:36:20", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-hamburg01/anat/sub-hamburg01_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-hamburg01/anat/sub-hamburg01_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json index 7427cbcb5a..336a638137 100644 --- a/derivatives/labels_softseg_bin/sub-hamburg01/anat/sub-hamburg01_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-hamburg01/anat/sub-hamburg01_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:20" + "Date": "2022-10-22 14:36:20", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-hamburg01/anat/sub-hamburg01_space-other_T1w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-hamburg01/anat/sub-hamburg01_space-other_T1w_desc-softseg_label-SC_seg.json index 7427cbcb5a..bdcc7d2c78 100644 --- a/derivatives/labels_softseg_bin/sub-hamburg01/anat/sub-hamburg01_space-other_T1w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-hamburg01/anat/sub-hamburg01_space-other_T1w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:20" + "Date": "2022-10-22 14:36:20", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-hamburg01/anat/sub-hamburg01_space-other_T2star_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-hamburg01/anat/sub-hamburg01_space-other_T2star_desc-softseg_label-SC_seg.json index 7427cbcb5a..87f239f56d 100644 --- a/derivatives/labels_softseg_bin/sub-hamburg01/anat/sub-hamburg01_space-other_T2star_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-hamburg01/anat/sub-hamburg01_space-other_T2star_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:20" + "Date": "2022-10-22 14:36:20", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-hamburg01/anat/sub-hamburg01_space-other_T2w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-hamburg01/anat/sub-hamburg01_space-other_T2w_desc-softseg_label-SC_seg.json index 7427cbcb5a..468fcc1c83 100644 --- a/derivatives/labels_softseg_bin/sub-hamburg01/anat/sub-hamburg01_space-other_T2w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-hamburg01/anat/sub-hamburg01_space-other_T2w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:20" + "Date": "2022-10-22 14:36:20", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-hamburg02/anat/sub-hamburg02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-hamburg02/anat/sub-hamburg02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json index 7427cbcb5a..336a638137 100644 --- a/derivatives/labels_softseg_bin/sub-hamburg02/anat/sub-hamburg02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-hamburg02/anat/sub-hamburg02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:20" + "Date": "2022-10-22 14:36:20", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-hamburg02/anat/sub-hamburg02_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-hamburg02/anat/sub-hamburg02_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json index 7427cbcb5a..336a638137 100644 --- a/derivatives/labels_softseg_bin/sub-hamburg02/anat/sub-hamburg02_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-hamburg02/anat/sub-hamburg02_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:20" + "Date": "2022-10-22 14:36:20", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-hamburg02/anat/sub-hamburg02_space-other_T1w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-hamburg02/anat/sub-hamburg02_space-other_T1w_desc-softseg_label-SC_seg.json index 7427cbcb5a..bdcc7d2c78 100644 --- a/derivatives/labels_softseg_bin/sub-hamburg02/anat/sub-hamburg02_space-other_T1w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-hamburg02/anat/sub-hamburg02_space-other_T1w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:20" + "Date": "2022-10-22 14:36:20", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-hamburg02/anat/sub-hamburg02_space-other_T2star_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-hamburg02/anat/sub-hamburg02_space-other_T2star_desc-softseg_label-SC_seg.json index 7427cbcb5a..87f239f56d 100644 --- a/derivatives/labels_softseg_bin/sub-hamburg02/anat/sub-hamburg02_space-other_T2star_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-hamburg02/anat/sub-hamburg02_space-other_T2star_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:20" + "Date": "2022-10-22 14:36:20", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-hamburg02/anat/sub-hamburg02_space-other_T2w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-hamburg02/anat/sub-hamburg02_space-other_T2w_desc-softseg_label-SC_seg.json index 7427cbcb5a..468fcc1c83 100644 --- a/derivatives/labels_softseg_bin/sub-hamburg02/anat/sub-hamburg02_space-other_T2w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-hamburg02/anat/sub-hamburg02_space-other_T2w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:20" + "Date": "2022-10-22 14:36:20", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-hamburg03/anat/sub-hamburg03_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-hamburg03/anat/sub-hamburg03_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json index 7427cbcb5a..336a638137 100644 --- a/derivatives/labels_softseg_bin/sub-hamburg03/anat/sub-hamburg03_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-hamburg03/anat/sub-hamburg03_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:20" + "Date": "2022-10-22 14:36:20", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-hamburg03/anat/sub-hamburg03_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-hamburg03/anat/sub-hamburg03_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json index 7427cbcb5a..336a638137 100644 --- a/derivatives/labels_softseg_bin/sub-hamburg03/anat/sub-hamburg03_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-hamburg03/anat/sub-hamburg03_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:20" + "Date": "2022-10-22 14:36:20", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-hamburg03/anat/sub-hamburg03_space-other_T1w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-hamburg03/anat/sub-hamburg03_space-other_T1w_desc-softseg_label-SC_seg.json index 7427cbcb5a..bdcc7d2c78 100644 --- a/derivatives/labels_softseg_bin/sub-hamburg03/anat/sub-hamburg03_space-other_T1w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-hamburg03/anat/sub-hamburg03_space-other_T1w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:20" + "Date": "2022-10-22 14:36:20", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-hamburg03/anat/sub-hamburg03_space-other_T2star_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-hamburg03/anat/sub-hamburg03_space-other_T2star_desc-softseg_label-SC_seg.json index 7427cbcb5a..87f239f56d 100644 --- a/derivatives/labels_softseg_bin/sub-hamburg03/anat/sub-hamburg03_space-other_T2star_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-hamburg03/anat/sub-hamburg03_space-other_T2star_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:20" + "Date": "2022-10-22 14:36:20", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-hamburg03/anat/sub-hamburg03_space-other_T2w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-hamburg03/anat/sub-hamburg03_space-other_T2w_desc-softseg_label-SC_seg.json index 7427cbcb5a..468fcc1c83 100644 --- a/derivatives/labels_softseg_bin/sub-hamburg03/anat/sub-hamburg03_space-other_T2w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-hamburg03/anat/sub-hamburg03_space-other_T2w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:20" + "Date": "2022-10-22 14:36:20", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-hamburg04/anat/sub-hamburg04_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-hamburg04/anat/sub-hamburg04_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json index 6b43fe629f..973c483448 100644 --- a/derivatives/labels_softseg_bin/sub-hamburg04/anat/sub-hamburg04_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-hamburg04/anat/sub-hamburg04_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:21" + "Date": "2022-10-22 14:36:21", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-hamburg04/anat/sub-hamburg04_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-hamburg04/anat/sub-hamburg04_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json index 6b43fe629f..973c483448 100644 --- a/derivatives/labels_softseg_bin/sub-hamburg04/anat/sub-hamburg04_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-hamburg04/anat/sub-hamburg04_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:21" + "Date": "2022-10-22 14:36:21", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-hamburg04/anat/sub-hamburg04_space-other_T1w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-hamburg04/anat/sub-hamburg04_space-other_T1w_desc-softseg_label-SC_seg.json index 6b43fe629f..a67d44072c 100644 --- a/derivatives/labels_softseg_bin/sub-hamburg04/anat/sub-hamburg04_space-other_T1w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-hamburg04/anat/sub-hamburg04_space-other_T1w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:21" + "Date": "2022-10-22 14:36:21", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-hamburg04/anat/sub-hamburg04_space-other_T2star_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-hamburg04/anat/sub-hamburg04_space-other_T2star_desc-softseg_label-SC_seg.json index 6b43fe629f..b38b9e0a7e 100644 --- a/derivatives/labels_softseg_bin/sub-hamburg04/anat/sub-hamburg04_space-other_T2star_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-hamburg04/anat/sub-hamburg04_space-other_T2star_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:21" + "Date": "2022-10-22 14:36:21", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-hamburg04/anat/sub-hamburg04_space-other_T2w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-hamburg04/anat/sub-hamburg04_space-other_T2w_desc-softseg_label-SC_seg.json index 6b43fe629f..39b861438c 100644 --- a/derivatives/labels_softseg_bin/sub-hamburg04/anat/sub-hamburg04_space-other_T2w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-hamburg04/anat/sub-hamburg04_space-other_T2w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:21" + "Date": "2022-10-22 14:36:21", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-hamburg05/anat/sub-hamburg05_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-hamburg05/anat/sub-hamburg05_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json index 6b43fe629f..973c483448 100644 --- a/derivatives/labels_softseg_bin/sub-hamburg05/anat/sub-hamburg05_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-hamburg05/anat/sub-hamburg05_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:21" + "Date": "2022-10-22 14:36:21", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-hamburg05/anat/sub-hamburg05_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-hamburg05/anat/sub-hamburg05_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json index 6b43fe629f..973c483448 100644 --- a/derivatives/labels_softseg_bin/sub-hamburg05/anat/sub-hamburg05_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-hamburg05/anat/sub-hamburg05_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:21" + "Date": "2022-10-22 14:36:21", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-hamburg05/anat/sub-hamburg05_space-other_T1w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-hamburg05/anat/sub-hamburg05_space-other_T1w_desc-softseg_label-SC_seg.json index 6b43fe629f..a67d44072c 100644 --- a/derivatives/labels_softseg_bin/sub-hamburg05/anat/sub-hamburg05_space-other_T1w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-hamburg05/anat/sub-hamburg05_space-other_T1w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:21" + "Date": "2022-10-22 14:36:21", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-hamburg05/anat/sub-hamburg05_space-other_T2star_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-hamburg05/anat/sub-hamburg05_space-other_T2star_desc-softseg_label-SC_seg.json index 6b43fe629f..b38b9e0a7e 100644 --- a/derivatives/labels_softseg_bin/sub-hamburg05/anat/sub-hamburg05_space-other_T2star_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-hamburg05/anat/sub-hamburg05_space-other_T2star_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:21" + "Date": "2022-10-22 14:36:21", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-hamburg05/anat/sub-hamburg05_space-other_T2w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-hamburg05/anat/sub-hamburg05_space-other_T2w_desc-softseg_label-SC_seg.json index 6b43fe629f..39b861438c 100644 --- a/derivatives/labels_softseg_bin/sub-hamburg05/anat/sub-hamburg05_space-other_T2w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-hamburg05/anat/sub-hamburg05_space-other_T2w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:21" + "Date": "2022-10-22 14:36:21", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-hamburg06/anat/sub-hamburg06_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-hamburg06/anat/sub-hamburg06_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json index 6b43fe629f..973c483448 100644 --- a/derivatives/labels_softseg_bin/sub-hamburg06/anat/sub-hamburg06_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-hamburg06/anat/sub-hamburg06_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:21" + "Date": "2022-10-22 14:36:21", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-hamburg06/anat/sub-hamburg06_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-hamburg06/anat/sub-hamburg06_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json index 6b43fe629f..973c483448 100644 --- a/derivatives/labels_softseg_bin/sub-hamburg06/anat/sub-hamburg06_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-hamburg06/anat/sub-hamburg06_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:21" + "Date": "2022-10-22 14:36:21", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-hamburg06/anat/sub-hamburg06_space-other_T1w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-hamburg06/anat/sub-hamburg06_space-other_T1w_desc-softseg_label-SC_seg.json index 6b43fe629f..a67d44072c 100644 --- a/derivatives/labels_softseg_bin/sub-hamburg06/anat/sub-hamburg06_space-other_T1w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-hamburg06/anat/sub-hamburg06_space-other_T1w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:21" + "Date": "2022-10-22 14:36:21", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-hamburg06/anat/sub-hamburg06_space-other_T2star_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-hamburg06/anat/sub-hamburg06_space-other_T2star_desc-softseg_label-SC_seg.json index 6b43fe629f..b38b9e0a7e 100644 --- a/derivatives/labels_softseg_bin/sub-hamburg06/anat/sub-hamburg06_space-other_T2star_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-hamburg06/anat/sub-hamburg06_space-other_T2star_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:21" + "Date": "2022-10-22 14:36:21", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-hamburg06/anat/sub-hamburg06_space-other_T2w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-hamburg06/anat/sub-hamburg06_space-other_T2w_desc-softseg_label-SC_seg.json index 6b43fe629f..39b861438c 100644 --- a/derivatives/labels_softseg_bin/sub-hamburg06/anat/sub-hamburg06_space-other_T2w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-hamburg06/anat/sub-hamburg06_space-other_T2w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:21" + "Date": "2022-10-22 14:36:21", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-juntendo750w01/anat/sub-juntendo750w01_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-juntendo750w01/anat/sub-juntendo750w01_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json index 6b43fe629f..973c483448 100644 --- a/derivatives/labels_softseg_bin/sub-juntendo750w01/anat/sub-juntendo750w01_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-juntendo750w01/anat/sub-juntendo750w01_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:21" + "Date": "2022-10-22 14:36:21", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-juntendo750w01/anat/sub-juntendo750w01_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-juntendo750w01/anat/sub-juntendo750w01_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json index 6b43fe629f..973c483448 100644 --- a/derivatives/labels_softseg_bin/sub-juntendo750w01/anat/sub-juntendo750w01_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-juntendo750w01/anat/sub-juntendo750w01_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:21" + "Date": "2022-10-22 14:36:21", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-juntendo750w01/anat/sub-juntendo750w01_space-other_T1w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-juntendo750w01/anat/sub-juntendo750w01_space-other_T1w_desc-softseg_label-SC_seg.json index 6b43fe629f..a67d44072c 100644 --- a/derivatives/labels_softseg_bin/sub-juntendo750w01/anat/sub-juntendo750w01_space-other_T1w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-juntendo750w01/anat/sub-juntendo750w01_space-other_T1w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:21" + "Date": "2022-10-22 14:36:21", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-juntendo750w01/anat/sub-juntendo750w01_space-other_T2star_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-juntendo750w01/anat/sub-juntendo750w01_space-other_T2star_desc-softseg_label-SC_seg.json index 6b43fe629f..b38b9e0a7e 100644 --- a/derivatives/labels_softseg_bin/sub-juntendo750w01/anat/sub-juntendo750w01_space-other_T2star_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-juntendo750w01/anat/sub-juntendo750w01_space-other_T2star_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:21" + "Date": "2022-10-22 14:36:21", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-juntendo750w01/anat/sub-juntendo750w01_space-other_T2w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-juntendo750w01/anat/sub-juntendo750w01_space-other_T2w_desc-softseg_label-SC_seg.json index 6b43fe629f..39b861438c 100644 --- a/derivatives/labels_softseg_bin/sub-juntendo750w01/anat/sub-juntendo750w01_space-other_T2w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-juntendo750w01/anat/sub-juntendo750w01_space-other_T2w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:21" + "Date": "2022-10-22 14:36:21", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-juntendo750w02/anat/sub-juntendo750w02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-juntendo750w02/anat/sub-juntendo750w02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json index c05b2a0b2d..03208c6e1d 100644 --- a/derivatives/labels_softseg_bin/sub-juntendo750w02/anat/sub-juntendo750w02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-juntendo750w02/anat/sub-juntendo750w02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:22" + "Date": "2022-10-22 14:36:22", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-juntendo750w02/anat/sub-juntendo750w02_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-juntendo750w02/anat/sub-juntendo750w02_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json index c05b2a0b2d..03208c6e1d 100644 --- a/derivatives/labels_softseg_bin/sub-juntendo750w02/anat/sub-juntendo750w02_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-juntendo750w02/anat/sub-juntendo750w02_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:22" + "Date": "2022-10-22 14:36:22", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-juntendo750w02/anat/sub-juntendo750w02_space-other_T1w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-juntendo750w02/anat/sub-juntendo750w02_space-other_T1w_desc-softseg_label-SC_seg.json index c05b2a0b2d..397c5f402f 100644 --- a/derivatives/labels_softseg_bin/sub-juntendo750w02/anat/sub-juntendo750w02_space-other_T1w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-juntendo750w02/anat/sub-juntendo750w02_space-other_T1w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:22" + "Date": "2022-10-22 14:36:22", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-juntendo750w02/anat/sub-juntendo750w02_space-other_T2star_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-juntendo750w02/anat/sub-juntendo750w02_space-other_T2star_desc-softseg_label-SC_seg.json index c05b2a0b2d..072854c2e7 100644 --- a/derivatives/labels_softseg_bin/sub-juntendo750w02/anat/sub-juntendo750w02_space-other_T2star_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-juntendo750w02/anat/sub-juntendo750w02_space-other_T2star_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:22" + "Date": "2022-10-22 14:36:22", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-juntendo750w02/anat/sub-juntendo750w02_space-other_T2w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-juntendo750w02/anat/sub-juntendo750w02_space-other_T2w_desc-softseg_label-SC_seg.json index c05b2a0b2d..6af37c5def 100644 --- a/derivatives/labels_softseg_bin/sub-juntendo750w02/anat/sub-juntendo750w02_space-other_T2w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-juntendo750w02/anat/sub-juntendo750w02_space-other_T2w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:22" + "Date": "2022-10-22 14:36:22", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-juntendo750w03/anat/sub-juntendo750w03_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-juntendo750w03/anat/sub-juntendo750w03_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json index c05b2a0b2d..03208c6e1d 100644 --- a/derivatives/labels_softseg_bin/sub-juntendo750w03/anat/sub-juntendo750w03_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-juntendo750w03/anat/sub-juntendo750w03_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:22" + "Date": "2022-10-22 14:36:22", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-juntendo750w03/anat/sub-juntendo750w03_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-juntendo750w03/anat/sub-juntendo750w03_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json index c05b2a0b2d..03208c6e1d 100644 --- a/derivatives/labels_softseg_bin/sub-juntendo750w03/anat/sub-juntendo750w03_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-juntendo750w03/anat/sub-juntendo750w03_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:22" + "Date": "2022-10-22 14:36:22", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-juntendo750w03/anat/sub-juntendo750w03_space-other_T1w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-juntendo750w03/anat/sub-juntendo750w03_space-other_T1w_desc-softseg_label-SC_seg.json index c05b2a0b2d..397c5f402f 100644 --- a/derivatives/labels_softseg_bin/sub-juntendo750w03/anat/sub-juntendo750w03_space-other_T1w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-juntendo750w03/anat/sub-juntendo750w03_space-other_T1w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:22" + "Date": "2022-10-22 14:36:22", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-juntendo750w03/anat/sub-juntendo750w03_space-other_T2star_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-juntendo750w03/anat/sub-juntendo750w03_space-other_T2star_desc-softseg_label-SC_seg.json index c05b2a0b2d..072854c2e7 100644 --- a/derivatives/labels_softseg_bin/sub-juntendo750w03/anat/sub-juntendo750w03_space-other_T2star_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-juntendo750w03/anat/sub-juntendo750w03_space-other_T2star_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:22" + "Date": "2022-10-22 14:36:22", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-juntendo750w03/anat/sub-juntendo750w03_space-other_T2w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-juntendo750w03/anat/sub-juntendo750w03_space-other_T2w_desc-softseg_label-SC_seg.json index c05b2a0b2d..6af37c5def 100644 --- a/derivatives/labels_softseg_bin/sub-juntendo750w03/anat/sub-juntendo750w03_space-other_T2w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-juntendo750w03/anat/sub-juntendo750w03_space-other_T2w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:22" + "Date": "2022-10-22 14:36:22", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-juntendo750w04/anat/sub-juntendo750w04_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-juntendo750w04/anat/sub-juntendo750w04_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json index c05b2a0b2d..03208c6e1d 100644 --- a/derivatives/labels_softseg_bin/sub-juntendo750w04/anat/sub-juntendo750w04_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-juntendo750w04/anat/sub-juntendo750w04_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:22" + "Date": "2022-10-22 14:36:22", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-juntendo750w04/anat/sub-juntendo750w04_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-juntendo750w04/anat/sub-juntendo750w04_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json index c05b2a0b2d..03208c6e1d 100644 --- a/derivatives/labels_softseg_bin/sub-juntendo750w04/anat/sub-juntendo750w04_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-juntendo750w04/anat/sub-juntendo750w04_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:22" + "Date": "2022-10-22 14:36:22", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-juntendo750w04/anat/sub-juntendo750w04_space-other_T1w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-juntendo750w04/anat/sub-juntendo750w04_space-other_T1w_desc-softseg_label-SC_seg.json index c05b2a0b2d..397c5f402f 100644 --- a/derivatives/labels_softseg_bin/sub-juntendo750w04/anat/sub-juntendo750w04_space-other_T1w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-juntendo750w04/anat/sub-juntendo750w04_space-other_T1w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:22" + "Date": "2022-10-22 14:36:22", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-juntendo750w04/anat/sub-juntendo750w04_space-other_T2star_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-juntendo750w04/anat/sub-juntendo750w04_space-other_T2star_desc-softseg_label-SC_seg.json index c05b2a0b2d..072854c2e7 100644 --- a/derivatives/labels_softseg_bin/sub-juntendo750w04/anat/sub-juntendo750w04_space-other_T2star_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-juntendo750w04/anat/sub-juntendo750w04_space-other_T2star_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:22" + "Date": "2022-10-22 14:36:22", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-juntendo750w04/anat/sub-juntendo750w04_space-other_T2w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-juntendo750w04/anat/sub-juntendo750w04_space-other_T2w_desc-softseg_label-SC_seg.json index c05b2a0b2d..6af37c5def 100644 --- a/derivatives/labels_softseg_bin/sub-juntendo750w04/anat/sub-juntendo750w04_space-other_T2w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-juntendo750w04/anat/sub-juntendo750w04_space-other_T2w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:22" + "Date": "2022-10-22 14:36:22", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-juntendo750w05/anat/sub-juntendo750w05_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-juntendo750w05/anat/sub-juntendo750w05_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json index c05b2a0b2d..03208c6e1d 100644 --- a/derivatives/labels_softseg_bin/sub-juntendo750w05/anat/sub-juntendo750w05_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-juntendo750w05/anat/sub-juntendo750w05_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:22" + "Date": "2022-10-22 14:36:22", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-juntendo750w05/anat/sub-juntendo750w05_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-juntendo750w05/anat/sub-juntendo750w05_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json index c05b2a0b2d..03208c6e1d 100644 --- a/derivatives/labels_softseg_bin/sub-juntendo750w05/anat/sub-juntendo750w05_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-juntendo750w05/anat/sub-juntendo750w05_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:22" + "Date": "2022-10-22 14:36:22", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-juntendo750w05/anat/sub-juntendo750w05_space-other_T1w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-juntendo750w05/anat/sub-juntendo750w05_space-other_T1w_desc-softseg_label-SC_seg.json index f2a78131a0..a96fd50dfb 100644 --- a/derivatives/labels_softseg_bin/sub-juntendo750w05/anat/sub-juntendo750w05_space-other_T1w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-juntendo750w05/anat/sub-juntendo750w05_space-other_T1w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:23" + "Date": "2022-10-22 14:36:23", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-juntendo750w05/anat/sub-juntendo750w05_space-other_T2star_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-juntendo750w05/anat/sub-juntendo750w05_space-other_T2star_desc-softseg_label-SC_seg.json index f2a78131a0..9343f7d35f 100644 --- a/derivatives/labels_softseg_bin/sub-juntendo750w05/anat/sub-juntendo750w05_space-other_T2star_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-juntendo750w05/anat/sub-juntendo750w05_space-other_T2star_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:23" + "Date": "2022-10-22 14:36:23", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-juntendo750w05/anat/sub-juntendo750w05_space-other_T2w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-juntendo750w05/anat/sub-juntendo750w05_space-other_T2w_desc-softseg_label-SC_seg.json index f2a78131a0..d76d7b5832 100644 --- a/derivatives/labels_softseg_bin/sub-juntendo750w05/anat/sub-juntendo750w05_space-other_T2w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-juntendo750w05/anat/sub-juntendo750w05_space-other_T2w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:23" + "Date": "2022-10-22 14:36:23", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-juntendo750w06/anat/sub-juntendo750w06_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-juntendo750w06/anat/sub-juntendo750w06_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json index f2a78131a0..fc484f764f 100644 --- a/derivatives/labels_softseg_bin/sub-juntendo750w06/anat/sub-juntendo750w06_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-juntendo750w06/anat/sub-juntendo750w06_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:23" + "Date": "2022-10-22 14:36:23", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-juntendo750w06/anat/sub-juntendo750w06_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-juntendo750w06/anat/sub-juntendo750w06_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json index f2a78131a0..fc484f764f 100644 --- a/derivatives/labels_softseg_bin/sub-juntendo750w06/anat/sub-juntendo750w06_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-juntendo750w06/anat/sub-juntendo750w06_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:23" + "Date": "2022-10-22 14:36:23", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-juntendo750w06/anat/sub-juntendo750w06_space-other_T1w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-juntendo750w06/anat/sub-juntendo750w06_space-other_T1w_desc-softseg_label-SC_seg.json index f2a78131a0..a96fd50dfb 100644 --- a/derivatives/labels_softseg_bin/sub-juntendo750w06/anat/sub-juntendo750w06_space-other_T1w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-juntendo750w06/anat/sub-juntendo750w06_space-other_T1w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:23" + "Date": "2022-10-22 14:36:23", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-juntendo750w06/anat/sub-juntendo750w06_space-other_T2star_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-juntendo750w06/anat/sub-juntendo750w06_space-other_T2star_desc-softseg_label-SC_seg.json index f2a78131a0..9343f7d35f 100644 --- a/derivatives/labels_softseg_bin/sub-juntendo750w06/anat/sub-juntendo750w06_space-other_T2star_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-juntendo750w06/anat/sub-juntendo750w06_space-other_T2star_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:23" + "Date": "2022-10-22 14:36:23", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-juntendo750w06/anat/sub-juntendo750w06_space-other_T2w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-juntendo750w06/anat/sub-juntendo750w06_space-other_T2w_desc-softseg_label-SC_seg.json index f2a78131a0..d76d7b5832 100644 --- a/derivatives/labels_softseg_bin/sub-juntendo750w06/anat/sub-juntendo750w06_space-other_T2w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-juntendo750w06/anat/sub-juntendo750w06_space-other_T2w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:23" + "Date": "2022-10-22 14:36:23", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-mgh01/anat/sub-mgh01_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-mgh01/anat/sub-mgh01_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json index f2a78131a0..fc484f764f 100644 --- a/derivatives/labels_softseg_bin/sub-mgh01/anat/sub-mgh01_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-mgh01/anat/sub-mgh01_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:23" + "Date": "2022-10-22 14:36:23", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-mgh01/anat/sub-mgh01_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-mgh01/anat/sub-mgh01_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json index f2a78131a0..fc484f764f 100644 --- a/derivatives/labels_softseg_bin/sub-mgh01/anat/sub-mgh01_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-mgh01/anat/sub-mgh01_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:23" + "Date": "2022-10-22 14:36:23", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-mgh01/anat/sub-mgh01_space-other_T1w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-mgh01/anat/sub-mgh01_space-other_T1w_desc-softseg_label-SC_seg.json index f2a78131a0..a96fd50dfb 100644 --- a/derivatives/labels_softseg_bin/sub-mgh01/anat/sub-mgh01_space-other_T1w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-mgh01/anat/sub-mgh01_space-other_T1w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:23" + "Date": "2022-10-22 14:36:23", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-mgh01/anat/sub-mgh01_space-other_T2star_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-mgh01/anat/sub-mgh01_space-other_T2star_desc-softseg_label-SC_seg.json index f2a78131a0..9343f7d35f 100644 --- a/derivatives/labels_softseg_bin/sub-mgh01/anat/sub-mgh01_space-other_T2star_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-mgh01/anat/sub-mgh01_space-other_T2star_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:23" + "Date": "2022-10-22 14:36:23", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-mgh01/anat/sub-mgh01_space-other_T2w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-mgh01/anat/sub-mgh01_space-other_T2w_desc-softseg_label-SC_seg.json index f2a78131a0..d76d7b5832 100644 --- a/derivatives/labels_softseg_bin/sub-mgh01/anat/sub-mgh01_space-other_T2w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-mgh01/anat/sub-mgh01_space-other_T2w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:23" + "Date": "2022-10-22 14:36:23", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-mgh02/anat/sub-mgh02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-mgh02/anat/sub-mgh02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json index f2a78131a0..fc484f764f 100644 --- a/derivatives/labels_softseg_bin/sub-mgh02/anat/sub-mgh02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-mgh02/anat/sub-mgh02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:23" + "Date": "2022-10-22 14:36:23", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-mgh02/anat/sub-mgh02_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-mgh02/anat/sub-mgh02_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json index f2a78131a0..fc484f764f 100644 --- a/derivatives/labels_softseg_bin/sub-mgh02/anat/sub-mgh02_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-mgh02/anat/sub-mgh02_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:23" + "Date": "2022-10-22 14:36:23", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-mgh02/anat/sub-mgh02_space-other_T1w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-mgh02/anat/sub-mgh02_space-other_T1w_desc-softseg_label-SC_seg.json index f2a78131a0..a96fd50dfb 100644 --- a/derivatives/labels_softseg_bin/sub-mgh02/anat/sub-mgh02_space-other_T1w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-mgh02/anat/sub-mgh02_space-other_T1w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:23" + "Date": "2022-10-22 14:36:23", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-mgh02/anat/sub-mgh02_space-other_T2star_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-mgh02/anat/sub-mgh02_space-other_T2star_desc-softseg_label-SC_seg.json index f2a78131a0..9343f7d35f 100644 --- a/derivatives/labels_softseg_bin/sub-mgh02/anat/sub-mgh02_space-other_T2star_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-mgh02/anat/sub-mgh02_space-other_T2star_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:23" + "Date": "2022-10-22 14:36:23", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-mgh02/anat/sub-mgh02_space-other_T2w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-mgh02/anat/sub-mgh02_space-other_T2w_desc-softseg_label-SC_seg.json index f2a78131a0..d76d7b5832 100644 --- a/derivatives/labels_softseg_bin/sub-mgh02/anat/sub-mgh02_space-other_T2w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-mgh02/anat/sub-mgh02_space-other_T2w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:23" + "Date": "2022-10-22 14:36:23", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-mgh03/anat/sub-mgh03_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-mgh03/anat/sub-mgh03_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json index 0a66c7c0c3..0b55cfad47 100644 --- a/derivatives/labels_softseg_bin/sub-mgh03/anat/sub-mgh03_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-mgh03/anat/sub-mgh03_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:24" + "Date": "2022-10-22 14:36:24", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-mgh03/anat/sub-mgh03_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-mgh03/anat/sub-mgh03_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json index 0a66c7c0c3..0b55cfad47 100644 --- a/derivatives/labels_softseg_bin/sub-mgh03/anat/sub-mgh03_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-mgh03/anat/sub-mgh03_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:24" + "Date": "2022-10-22 14:36:24", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-mgh03/anat/sub-mgh03_space-other_T1w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-mgh03/anat/sub-mgh03_space-other_T1w_desc-softseg_label-SC_seg.json index 0a66c7c0c3..e94e1f4f96 100644 --- a/derivatives/labels_softseg_bin/sub-mgh03/anat/sub-mgh03_space-other_T1w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-mgh03/anat/sub-mgh03_space-other_T1w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:24" + "Date": "2022-10-22 14:36:24", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-mgh03/anat/sub-mgh03_space-other_T2star_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-mgh03/anat/sub-mgh03_space-other_T2star_desc-softseg_label-SC_seg.json index 0a66c7c0c3..b5184dbc5b 100644 --- a/derivatives/labels_softseg_bin/sub-mgh03/anat/sub-mgh03_space-other_T2star_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-mgh03/anat/sub-mgh03_space-other_T2star_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:24" + "Date": "2022-10-22 14:36:24", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-mgh03/anat/sub-mgh03_space-other_T2w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-mgh03/anat/sub-mgh03_space-other_T2w_desc-softseg_label-SC_seg.json index 0a66c7c0c3..908aee24b6 100644 --- a/derivatives/labels_softseg_bin/sub-mgh03/anat/sub-mgh03_space-other_T2w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-mgh03/anat/sub-mgh03_space-other_T2w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:24" + "Date": "2022-10-22 14:36:24", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-mgh04/anat/sub-mgh04_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-mgh04/anat/sub-mgh04_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json index 0a66c7c0c3..0b55cfad47 100644 --- a/derivatives/labels_softseg_bin/sub-mgh04/anat/sub-mgh04_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-mgh04/anat/sub-mgh04_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:24" + "Date": "2022-10-22 14:36:24", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-mgh04/anat/sub-mgh04_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-mgh04/anat/sub-mgh04_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json index 0a66c7c0c3..0b55cfad47 100644 --- a/derivatives/labels_softseg_bin/sub-mgh04/anat/sub-mgh04_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-mgh04/anat/sub-mgh04_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:24" + "Date": "2022-10-22 14:36:24", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-mgh04/anat/sub-mgh04_space-other_T1w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-mgh04/anat/sub-mgh04_space-other_T1w_desc-softseg_label-SC_seg.json index 0a66c7c0c3..e94e1f4f96 100644 --- a/derivatives/labels_softseg_bin/sub-mgh04/anat/sub-mgh04_space-other_T1w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-mgh04/anat/sub-mgh04_space-other_T1w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:24" + "Date": "2022-10-22 14:36:24", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-mgh04/anat/sub-mgh04_space-other_T2star_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-mgh04/anat/sub-mgh04_space-other_T2star_desc-softseg_label-SC_seg.json index 0a66c7c0c3..b5184dbc5b 100644 --- a/derivatives/labels_softseg_bin/sub-mgh04/anat/sub-mgh04_space-other_T2star_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-mgh04/anat/sub-mgh04_space-other_T2star_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:24" + "Date": "2022-10-22 14:36:24", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-mgh04/anat/sub-mgh04_space-other_T2w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-mgh04/anat/sub-mgh04_space-other_T2w_desc-softseg_label-SC_seg.json index 0a66c7c0c3..908aee24b6 100644 --- a/derivatives/labels_softseg_bin/sub-mgh04/anat/sub-mgh04_space-other_T2w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-mgh04/anat/sub-mgh04_space-other_T2w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:24" + "Date": "2022-10-22 14:36:24", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-mgh05/anat/sub-mgh05_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-mgh05/anat/sub-mgh05_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json index 0a66c7c0c3..0b55cfad47 100644 --- a/derivatives/labels_softseg_bin/sub-mgh05/anat/sub-mgh05_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-mgh05/anat/sub-mgh05_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:24" + "Date": "2022-10-22 14:36:24", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-mgh05/anat/sub-mgh05_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-mgh05/anat/sub-mgh05_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json index 0a66c7c0c3..0b55cfad47 100644 --- a/derivatives/labels_softseg_bin/sub-mgh05/anat/sub-mgh05_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-mgh05/anat/sub-mgh05_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:24" + "Date": "2022-10-22 14:36:24", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-mgh05/anat/sub-mgh05_space-other_T1w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-mgh05/anat/sub-mgh05_space-other_T1w_desc-softseg_label-SC_seg.json index 0a66c7c0c3..e94e1f4f96 100644 --- a/derivatives/labels_softseg_bin/sub-mgh05/anat/sub-mgh05_space-other_T1w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-mgh05/anat/sub-mgh05_space-other_T1w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:24" + "Date": "2022-10-22 14:36:24", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-mgh05/anat/sub-mgh05_space-other_T2star_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-mgh05/anat/sub-mgh05_space-other_T2star_desc-softseg_label-SC_seg.json index 0a66c7c0c3..b5184dbc5b 100644 --- a/derivatives/labels_softseg_bin/sub-mgh05/anat/sub-mgh05_space-other_T2star_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-mgh05/anat/sub-mgh05_space-other_T2star_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:24" + "Date": "2022-10-22 14:36:24", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-mgh05/anat/sub-mgh05_space-other_T2w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-mgh05/anat/sub-mgh05_space-other_T2w_desc-softseg_label-SC_seg.json index 0a66c7c0c3..908aee24b6 100644 --- a/derivatives/labels_softseg_bin/sub-mgh05/anat/sub-mgh05_space-other_T2w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-mgh05/anat/sub-mgh05_space-other_T2w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:24" + "Date": "2022-10-22 14:36:24", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-mgh06/anat/sub-mgh06_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-mgh06/anat/sub-mgh06_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json index 0a66c7c0c3..0b55cfad47 100644 --- a/derivatives/labels_softseg_bin/sub-mgh06/anat/sub-mgh06_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-mgh06/anat/sub-mgh06_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:24" + "Date": "2022-10-22 14:36:24", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-mgh06/anat/sub-mgh06_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-mgh06/anat/sub-mgh06_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json index 0a66c7c0c3..0b55cfad47 100644 --- a/derivatives/labels_softseg_bin/sub-mgh06/anat/sub-mgh06_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-mgh06/anat/sub-mgh06_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:24" + "Date": "2022-10-22 14:36:24", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-mgh06/anat/sub-mgh06_space-other_T1w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-mgh06/anat/sub-mgh06_space-other_T1w_desc-softseg_label-SC_seg.json index 0a66c7c0c3..e94e1f4f96 100644 --- a/derivatives/labels_softseg_bin/sub-mgh06/anat/sub-mgh06_space-other_T1w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-mgh06/anat/sub-mgh06_space-other_T1w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:24" + "Date": "2022-10-22 14:36:24", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-mgh06/anat/sub-mgh06_space-other_T2star_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-mgh06/anat/sub-mgh06_space-other_T2star_desc-softseg_label-SC_seg.json index 0a66c7c0c3..b5184dbc5b 100644 --- a/derivatives/labels_softseg_bin/sub-mgh06/anat/sub-mgh06_space-other_T2star_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-mgh06/anat/sub-mgh06_space-other_T2star_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:24" + "Date": "2022-10-22 14:36:24", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-mgh06/anat/sub-mgh06_space-other_T2w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-mgh06/anat/sub-mgh06_space-other_T2w_desc-softseg_label-SC_seg.json index 0a66c7c0c3..908aee24b6 100644 --- a/derivatives/labels_softseg_bin/sub-mgh06/anat/sub-mgh06_space-other_T2w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-mgh06/anat/sub-mgh06_space-other_T2w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:24" + "Date": "2022-10-22 14:36:24", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-milan01/anat/sub-milan01_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-milan01/anat/sub-milan01_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json index d1cc059831..790c0976d7 100644 --- a/derivatives/labels_softseg_bin/sub-milan01/anat/sub-milan01_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-milan01/anat/sub-milan01_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:25" + "Date": "2022-10-22 14:36:25", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-milan01/anat/sub-milan01_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-milan01/anat/sub-milan01_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json index d1cc059831..790c0976d7 100644 --- a/derivatives/labels_softseg_bin/sub-milan01/anat/sub-milan01_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-milan01/anat/sub-milan01_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:25" + "Date": "2022-10-22 14:36:25", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-milan01/anat/sub-milan01_space-other_T1w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-milan01/anat/sub-milan01_space-other_T1w_desc-softseg_label-SC_seg.json index d1cc059831..4b9d353821 100644 --- a/derivatives/labels_softseg_bin/sub-milan01/anat/sub-milan01_space-other_T1w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-milan01/anat/sub-milan01_space-other_T1w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:25" + "Date": "2022-10-22 14:36:25", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-milan01/anat/sub-milan01_space-other_T2star_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-milan01/anat/sub-milan01_space-other_T2star_desc-softseg_label-SC_seg.json index d1cc059831..ac97406c9b 100644 --- a/derivatives/labels_softseg_bin/sub-milan01/anat/sub-milan01_space-other_T2star_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-milan01/anat/sub-milan01_space-other_T2star_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:25" + "Date": "2022-10-22 14:36:25", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-milan01/anat/sub-milan01_space-other_T2w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-milan01/anat/sub-milan01_space-other_T2w_desc-softseg_label-SC_seg.json index d1cc059831..81fc017305 100644 --- a/derivatives/labels_softseg_bin/sub-milan01/anat/sub-milan01_space-other_T2w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-milan01/anat/sub-milan01_space-other_T2w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:25" + "Date": "2022-10-22 14:36:25", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-milan02/anat/sub-milan02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-milan02/anat/sub-milan02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json index d1cc059831..790c0976d7 100644 --- a/derivatives/labels_softseg_bin/sub-milan02/anat/sub-milan02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-milan02/anat/sub-milan02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:25" + "Date": "2022-10-22 14:36:25", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-milan02/anat/sub-milan02_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-milan02/anat/sub-milan02_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json index d1cc059831..790c0976d7 100644 --- a/derivatives/labels_softseg_bin/sub-milan02/anat/sub-milan02_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-milan02/anat/sub-milan02_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:25" + "Date": "2022-10-22 14:36:25", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-milan02/anat/sub-milan02_space-other_T1w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-milan02/anat/sub-milan02_space-other_T1w_desc-softseg_label-SC_seg.json index d1cc059831..4b9d353821 100644 --- a/derivatives/labels_softseg_bin/sub-milan02/anat/sub-milan02_space-other_T1w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-milan02/anat/sub-milan02_space-other_T1w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:25" + "Date": "2022-10-22 14:36:25", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-milan02/anat/sub-milan02_space-other_T2star_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-milan02/anat/sub-milan02_space-other_T2star_desc-softseg_label-SC_seg.json index d1cc059831..ac97406c9b 100644 --- a/derivatives/labels_softseg_bin/sub-milan02/anat/sub-milan02_space-other_T2star_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-milan02/anat/sub-milan02_space-other_T2star_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:25" + "Date": "2022-10-22 14:36:25", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-milan02/anat/sub-milan02_space-other_T2w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-milan02/anat/sub-milan02_space-other_T2w_desc-softseg_label-SC_seg.json index d1cc059831..81fc017305 100644 --- a/derivatives/labels_softseg_bin/sub-milan02/anat/sub-milan02_space-other_T2w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-milan02/anat/sub-milan02_space-other_T2w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:25" + "Date": "2022-10-22 14:36:25", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-milan03/anat/sub-milan03_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-milan03/anat/sub-milan03_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json index d1cc059831..790c0976d7 100644 --- a/derivatives/labels_softseg_bin/sub-milan03/anat/sub-milan03_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-milan03/anat/sub-milan03_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:25" + "Date": "2022-10-22 14:36:25", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-milan03/anat/sub-milan03_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-milan03/anat/sub-milan03_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json index d1cc059831..790c0976d7 100644 --- a/derivatives/labels_softseg_bin/sub-milan03/anat/sub-milan03_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-milan03/anat/sub-milan03_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:25" + "Date": "2022-10-22 14:36:25", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-milan03/anat/sub-milan03_space-other_T1w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-milan03/anat/sub-milan03_space-other_T1w_desc-softseg_label-SC_seg.json index d1cc059831..4b9d353821 100644 --- a/derivatives/labels_softseg_bin/sub-milan03/anat/sub-milan03_space-other_T1w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-milan03/anat/sub-milan03_space-other_T1w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:25" + "Date": "2022-10-22 14:36:25", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-milan03/anat/sub-milan03_space-other_T2star_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-milan03/anat/sub-milan03_space-other_T2star_desc-softseg_label-SC_seg.json index d1cc059831..ac97406c9b 100644 --- a/derivatives/labels_softseg_bin/sub-milan03/anat/sub-milan03_space-other_T2star_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-milan03/anat/sub-milan03_space-other_T2star_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:25" + "Date": "2022-10-22 14:36:25", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-milan03/anat/sub-milan03_space-other_T2w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-milan03/anat/sub-milan03_space-other_T2w_desc-softseg_label-SC_seg.json index d1cc059831..81fc017305 100644 --- a/derivatives/labels_softseg_bin/sub-milan03/anat/sub-milan03_space-other_T2w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-milan03/anat/sub-milan03_space-other_T2w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:25" + "Date": "2022-10-22 14:36:25", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-milan04/anat/sub-milan04_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-milan04/anat/sub-milan04_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json index d1cc059831..790c0976d7 100644 --- a/derivatives/labels_softseg_bin/sub-milan04/anat/sub-milan04_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-milan04/anat/sub-milan04_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:25" + "Date": "2022-10-22 14:36:25", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-milan04/anat/sub-milan04_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-milan04/anat/sub-milan04_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json index d1cc059831..790c0976d7 100644 --- a/derivatives/labels_softseg_bin/sub-milan04/anat/sub-milan04_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-milan04/anat/sub-milan04_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:25" + "Date": "2022-10-22 14:36:25", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-milan04/anat/sub-milan04_space-other_T1w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-milan04/anat/sub-milan04_space-other_T1w_desc-softseg_label-SC_seg.json index d1cc059831..4b9d353821 100644 --- a/derivatives/labels_softseg_bin/sub-milan04/anat/sub-milan04_space-other_T1w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-milan04/anat/sub-milan04_space-other_T1w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:25" + "Date": "2022-10-22 14:36:25", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-milan04/anat/sub-milan04_space-other_T2star_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-milan04/anat/sub-milan04_space-other_T2star_desc-softseg_label-SC_seg.json index d1cc059831..ac97406c9b 100644 --- a/derivatives/labels_softseg_bin/sub-milan04/anat/sub-milan04_space-other_T2star_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-milan04/anat/sub-milan04_space-other_T2star_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:25" + "Date": "2022-10-22 14:36:25", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-milan04/anat/sub-milan04_space-other_T2w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-milan04/anat/sub-milan04_space-other_T2w_desc-softseg_label-SC_seg.json index d1cc059831..81fc017305 100644 --- a/derivatives/labels_softseg_bin/sub-milan04/anat/sub-milan04_space-other_T2w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-milan04/anat/sub-milan04_space-other_T2w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:25" + "Date": "2022-10-22 14:36:25", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-milan05/anat/sub-milan05_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-milan05/anat/sub-milan05_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json index f2e1189bfc..74761e0852 100644 --- a/derivatives/labels_softseg_bin/sub-milan05/anat/sub-milan05_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-milan05/anat/sub-milan05_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:26" + "Date": "2022-10-22 14:36:26", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-milan05/anat/sub-milan05_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-milan05/anat/sub-milan05_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json index f2e1189bfc..74761e0852 100644 --- a/derivatives/labels_softseg_bin/sub-milan05/anat/sub-milan05_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-milan05/anat/sub-milan05_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:26" + "Date": "2022-10-22 14:36:26", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-milan05/anat/sub-milan05_space-other_T1w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-milan05/anat/sub-milan05_space-other_T1w_desc-softseg_label-SC_seg.json index f2e1189bfc..7967ff8da0 100644 --- a/derivatives/labels_softseg_bin/sub-milan05/anat/sub-milan05_space-other_T1w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-milan05/anat/sub-milan05_space-other_T1w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:26" + "Date": "2022-10-22 14:36:26", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-milan05/anat/sub-milan05_space-other_T2star_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-milan05/anat/sub-milan05_space-other_T2star_desc-softseg_label-SC_seg.json index f2e1189bfc..7041a9738d 100644 --- a/derivatives/labels_softseg_bin/sub-milan05/anat/sub-milan05_space-other_T2star_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-milan05/anat/sub-milan05_space-other_T2star_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:26" + "Date": "2022-10-22 14:36:26", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-milan05/anat/sub-milan05_space-other_T2w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-milan05/anat/sub-milan05_space-other_T2w_desc-softseg_label-SC_seg.json index f2e1189bfc..93888968f6 100644 --- a/derivatives/labels_softseg_bin/sub-milan05/anat/sub-milan05_space-other_T2w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-milan05/anat/sub-milan05_space-other_T2w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:26" + "Date": "2022-10-22 14:36:26", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-milan06/anat/sub-milan06_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-milan06/anat/sub-milan06_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json index f2e1189bfc..74761e0852 100644 --- a/derivatives/labels_softseg_bin/sub-milan06/anat/sub-milan06_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-milan06/anat/sub-milan06_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:26" + "Date": "2022-10-22 14:36:26", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-milan06/anat/sub-milan06_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-milan06/anat/sub-milan06_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json index f2e1189bfc..74761e0852 100644 --- a/derivatives/labels_softseg_bin/sub-milan06/anat/sub-milan06_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-milan06/anat/sub-milan06_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:26" + "Date": "2022-10-22 14:36:26", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-milan06/anat/sub-milan06_space-other_T1w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-milan06/anat/sub-milan06_space-other_T1w_desc-softseg_label-SC_seg.json index f2e1189bfc..7967ff8da0 100644 --- a/derivatives/labels_softseg_bin/sub-milan06/anat/sub-milan06_space-other_T1w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-milan06/anat/sub-milan06_space-other_T1w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:26" + "Date": "2022-10-22 14:36:26", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-milan06/anat/sub-milan06_space-other_T2star_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-milan06/anat/sub-milan06_space-other_T2star_desc-softseg_label-SC_seg.json index f2e1189bfc..7041a9738d 100644 --- a/derivatives/labels_softseg_bin/sub-milan06/anat/sub-milan06_space-other_T2star_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-milan06/anat/sub-milan06_space-other_T2star_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:26" + "Date": "2022-10-22 14:36:26", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-milan06/anat/sub-milan06_space-other_T2w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-milan06/anat/sub-milan06_space-other_T2w_desc-softseg_label-SC_seg.json index f2e1189bfc..93888968f6 100644 --- a/derivatives/labels_softseg_bin/sub-milan06/anat/sub-milan06_space-other_T2w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-milan06/anat/sub-milan06_space-other_T2w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:26" + "Date": "2022-10-22 14:36:26", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-milan07/anat/sub-milan07_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-milan07/anat/sub-milan07_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json index f2e1189bfc..74761e0852 100644 --- a/derivatives/labels_softseg_bin/sub-milan07/anat/sub-milan07_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-milan07/anat/sub-milan07_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:26" + "Date": "2022-10-22 14:36:26", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-milan07/anat/sub-milan07_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-milan07/anat/sub-milan07_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json index f2e1189bfc..74761e0852 100644 --- a/derivatives/labels_softseg_bin/sub-milan07/anat/sub-milan07_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-milan07/anat/sub-milan07_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:26" + "Date": "2022-10-22 14:36:26", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-milan07/anat/sub-milan07_space-other_T1w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-milan07/anat/sub-milan07_space-other_T1w_desc-softseg_label-SC_seg.json index f2e1189bfc..7967ff8da0 100644 --- a/derivatives/labels_softseg_bin/sub-milan07/anat/sub-milan07_space-other_T1w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-milan07/anat/sub-milan07_space-other_T1w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:26" + "Date": "2022-10-22 14:36:26", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-milan07/anat/sub-milan07_space-other_T2star_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-milan07/anat/sub-milan07_space-other_T2star_desc-softseg_label-SC_seg.json index f2e1189bfc..7041a9738d 100644 --- a/derivatives/labels_softseg_bin/sub-milan07/anat/sub-milan07_space-other_T2star_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-milan07/anat/sub-milan07_space-other_T2star_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:26" + "Date": "2022-10-22 14:36:26", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-milan07/anat/sub-milan07_space-other_T2w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-milan07/anat/sub-milan07_space-other_T2w_desc-softseg_label-SC_seg.json index f2e1189bfc..93888968f6 100644 --- a/derivatives/labels_softseg_bin/sub-milan07/anat/sub-milan07_space-other_T2w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-milan07/anat/sub-milan07_space-other_T2w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:26" + "Date": "2022-10-22 14:36:26", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-mniPilot1/anat/sub-mniPilot1_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-mniPilot1/anat/sub-mniPilot1_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json index f2e1189bfc..74761e0852 100644 --- a/derivatives/labels_softseg_bin/sub-mniPilot1/anat/sub-mniPilot1_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-mniPilot1/anat/sub-mniPilot1_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:26" + "Date": "2022-10-22 14:36:26", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-mniPilot1/anat/sub-mniPilot1_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-mniPilot1/anat/sub-mniPilot1_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json index f2e1189bfc..74761e0852 100644 --- a/derivatives/labels_softseg_bin/sub-mniPilot1/anat/sub-mniPilot1_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-mniPilot1/anat/sub-mniPilot1_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:26" + "Date": "2022-10-22 14:36:26", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-mniPilot1/anat/sub-mniPilot1_space-other_T1w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-mniPilot1/anat/sub-mniPilot1_space-other_T1w_desc-softseg_label-SC_seg.json index f2e1189bfc..7967ff8da0 100644 --- a/derivatives/labels_softseg_bin/sub-mniPilot1/anat/sub-mniPilot1_space-other_T1w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-mniPilot1/anat/sub-mniPilot1_space-other_T1w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:26" + "Date": "2022-10-22 14:36:26", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-mniPilot1/anat/sub-mniPilot1_space-other_T2star_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-mniPilot1/anat/sub-mniPilot1_space-other_T2star_desc-softseg_label-SC_seg.json index 6517718c41..892b111d7d 100644 --- a/derivatives/labels_softseg_bin/sub-mniPilot1/anat/sub-mniPilot1_space-other_T2star_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-mniPilot1/anat/sub-mniPilot1_space-other_T2star_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:27" + "Date": "2022-10-22 14:36:27", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-mniPilot1/anat/sub-mniPilot1_space-other_T2w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-mniPilot1/anat/sub-mniPilot1_space-other_T2w_desc-softseg_label-SC_seg.json index 6517718c41..365a7d5dfa 100644 --- a/derivatives/labels_softseg_bin/sub-mniPilot1/anat/sub-mniPilot1_space-other_T2w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-mniPilot1/anat/sub-mniPilot1_space-other_T2w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:27" + "Date": "2022-10-22 14:36:27", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-mniS01/anat/sub-mniS01_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-mniS01/anat/sub-mniS01_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json index 6517718c41..ee78f48bab 100644 --- a/derivatives/labels_softseg_bin/sub-mniS01/anat/sub-mniS01_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-mniS01/anat/sub-mniS01_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:27" + "Date": "2022-10-22 14:36:27", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-mniS01/anat/sub-mniS01_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-mniS01/anat/sub-mniS01_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json index 6517718c41..ee78f48bab 100644 --- a/derivatives/labels_softseg_bin/sub-mniS01/anat/sub-mniS01_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-mniS01/anat/sub-mniS01_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:27" + "Date": "2022-10-22 14:36:27", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-mniS01/anat/sub-mniS01_space-other_T1w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-mniS01/anat/sub-mniS01_space-other_T1w_desc-softseg_label-SC_seg.json index 6517718c41..86812d65fc 100644 --- a/derivatives/labels_softseg_bin/sub-mniS01/anat/sub-mniS01_space-other_T1w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-mniS01/anat/sub-mniS01_space-other_T1w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:27" + "Date": "2022-10-22 14:36:27", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-mniS01/anat/sub-mniS01_space-other_T2star_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-mniS01/anat/sub-mniS01_space-other_T2star_desc-softseg_label-SC_seg.json index 6517718c41..892b111d7d 100644 --- a/derivatives/labels_softseg_bin/sub-mniS01/anat/sub-mniS01_space-other_T2star_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-mniS01/anat/sub-mniS01_space-other_T2star_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:27" + "Date": "2022-10-22 14:36:27", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-mniS01/anat/sub-mniS01_space-other_T2w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-mniS01/anat/sub-mniS01_space-other_T2w_desc-softseg_label-SC_seg.json index 6517718c41..365a7d5dfa 100644 --- a/derivatives/labels_softseg_bin/sub-mniS01/anat/sub-mniS01_space-other_T2w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-mniS01/anat/sub-mniS01_space-other_T2w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:27" + "Date": "2022-10-22 14:36:27", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-mniS02/anat/sub-mniS02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-mniS02/anat/sub-mniS02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json index 6517718c41..ee78f48bab 100644 --- a/derivatives/labels_softseg_bin/sub-mniS02/anat/sub-mniS02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-mniS02/anat/sub-mniS02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:27" + "Date": "2022-10-22 14:36:27", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-mniS02/anat/sub-mniS02_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-mniS02/anat/sub-mniS02_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json index 6517718c41..ee78f48bab 100644 --- a/derivatives/labels_softseg_bin/sub-mniS02/anat/sub-mniS02_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-mniS02/anat/sub-mniS02_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:27" + "Date": "2022-10-22 14:36:27", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-mniS02/anat/sub-mniS02_space-other_T1w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-mniS02/anat/sub-mniS02_space-other_T1w_desc-softseg_label-SC_seg.json index 6517718c41..86812d65fc 100644 --- a/derivatives/labels_softseg_bin/sub-mniS02/anat/sub-mniS02_space-other_T1w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-mniS02/anat/sub-mniS02_space-other_T1w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:27" + "Date": "2022-10-22 14:36:27", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-mniS02/anat/sub-mniS02_space-other_T2star_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-mniS02/anat/sub-mniS02_space-other_T2star_desc-softseg_label-SC_seg.json index 6517718c41..892b111d7d 100644 --- a/derivatives/labels_softseg_bin/sub-mniS02/anat/sub-mniS02_space-other_T2star_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-mniS02/anat/sub-mniS02_space-other_T2star_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:27" + "Date": "2022-10-22 14:36:27", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-mniS02/anat/sub-mniS02_space-other_T2w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-mniS02/anat/sub-mniS02_space-other_T2w_desc-softseg_label-SC_seg.json index 6517718c41..365a7d5dfa 100644 --- a/derivatives/labels_softseg_bin/sub-mniS02/anat/sub-mniS02_space-other_T2w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-mniS02/anat/sub-mniS02_space-other_T2w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:27" + "Date": "2022-10-22 14:36:27", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-mniS03/anat/sub-mniS03_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-mniS03/anat/sub-mniS03_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json index 6517718c41..ee78f48bab 100644 --- a/derivatives/labels_softseg_bin/sub-mniS03/anat/sub-mniS03_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-mniS03/anat/sub-mniS03_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:27" + "Date": "2022-10-22 14:36:27", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-mniS03/anat/sub-mniS03_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-mniS03/anat/sub-mniS03_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json index 6517718c41..ee78f48bab 100644 --- a/derivatives/labels_softseg_bin/sub-mniS03/anat/sub-mniS03_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-mniS03/anat/sub-mniS03_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:27" + "Date": "2022-10-22 14:36:27", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-mniS03/anat/sub-mniS03_space-other_T1w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-mniS03/anat/sub-mniS03_space-other_T1w_desc-softseg_label-SC_seg.json index 6517718c41..86812d65fc 100644 --- a/derivatives/labels_softseg_bin/sub-mniS03/anat/sub-mniS03_space-other_T1w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-mniS03/anat/sub-mniS03_space-other_T1w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:27" + "Date": "2022-10-22 14:36:27", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-mniS03/anat/sub-mniS03_space-other_T2star_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-mniS03/anat/sub-mniS03_space-other_T2star_desc-softseg_label-SC_seg.json index 6517718c41..892b111d7d 100644 --- a/derivatives/labels_softseg_bin/sub-mniS03/anat/sub-mniS03_space-other_T2star_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-mniS03/anat/sub-mniS03_space-other_T2star_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:27" + "Date": "2022-10-22 14:36:27", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-mniS03/anat/sub-mniS03_space-other_T2w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-mniS03/anat/sub-mniS03_space-other_T2w_desc-softseg_label-SC_seg.json index 6517718c41..365a7d5dfa 100644 --- a/derivatives/labels_softseg_bin/sub-mniS03/anat/sub-mniS03_space-other_T2w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-mniS03/anat/sub-mniS03_space-other_T2w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:27" + "Date": "2022-10-22 14:36:27", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-mniS04/anat/sub-mniS04_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-mniS04/anat/sub-mniS04_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json index 6517718c41..ee78f48bab 100644 --- a/derivatives/labels_softseg_bin/sub-mniS04/anat/sub-mniS04_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-mniS04/anat/sub-mniS04_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:27" + "Date": "2022-10-22 14:36:27", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-mniS04/anat/sub-mniS04_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-mniS04/anat/sub-mniS04_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json index 6517718c41..ee78f48bab 100644 --- a/derivatives/labels_softseg_bin/sub-mniS04/anat/sub-mniS04_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-mniS04/anat/sub-mniS04_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:27" + "Date": "2022-10-22 14:36:27", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-mniS04/anat/sub-mniS04_space-other_T1w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-mniS04/anat/sub-mniS04_space-other_T1w_desc-softseg_label-SC_seg.json index e74ad52ef6..6e1ec1fd19 100644 --- a/derivatives/labels_softseg_bin/sub-mniS04/anat/sub-mniS04_space-other_T1w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-mniS04/anat/sub-mniS04_space-other_T1w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:28" + "Date": "2022-10-22 14:36:28", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-mniS04/anat/sub-mniS04_space-other_T2star_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-mniS04/anat/sub-mniS04_space-other_T2star_desc-softseg_label-SC_seg.json index e74ad52ef6..4f4d2f5286 100644 --- a/derivatives/labels_softseg_bin/sub-mniS04/anat/sub-mniS04_space-other_T2star_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-mniS04/anat/sub-mniS04_space-other_T2star_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:28" + "Date": "2022-10-22 14:36:28", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-mniS04/anat/sub-mniS04_space-other_T2w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-mniS04/anat/sub-mniS04_space-other_T2w_desc-softseg_label-SC_seg.json index e74ad52ef6..23dbd13ead 100644 --- a/derivatives/labels_softseg_bin/sub-mniS04/anat/sub-mniS04_space-other_T2w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-mniS04/anat/sub-mniS04_space-other_T2w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:28" + "Date": "2022-10-22 14:36:28", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-mniS05/anat/sub-mniS05_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-mniS05/anat/sub-mniS05_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json index e74ad52ef6..e33a843259 100644 --- a/derivatives/labels_softseg_bin/sub-mniS05/anat/sub-mniS05_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-mniS05/anat/sub-mniS05_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:28" + "Date": "2022-10-22 14:36:28", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-mniS05/anat/sub-mniS05_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-mniS05/anat/sub-mniS05_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json index e74ad52ef6..e33a843259 100644 --- a/derivatives/labels_softseg_bin/sub-mniS05/anat/sub-mniS05_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-mniS05/anat/sub-mniS05_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:28" + "Date": "2022-10-22 14:36:28", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-mniS05/anat/sub-mniS05_space-other_T1w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-mniS05/anat/sub-mniS05_space-other_T1w_desc-softseg_label-SC_seg.json index e74ad52ef6..6e1ec1fd19 100644 --- a/derivatives/labels_softseg_bin/sub-mniS05/anat/sub-mniS05_space-other_T1w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-mniS05/anat/sub-mniS05_space-other_T1w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:28" + "Date": "2022-10-22 14:36:28", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-mniS05/anat/sub-mniS05_space-other_T2star_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-mniS05/anat/sub-mniS05_space-other_T2star_desc-softseg_label-SC_seg.json index e74ad52ef6..4f4d2f5286 100644 --- a/derivatives/labels_softseg_bin/sub-mniS05/anat/sub-mniS05_space-other_T2star_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-mniS05/anat/sub-mniS05_space-other_T2star_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:28" + "Date": "2022-10-22 14:36:28", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-mniS05/anat/sub-mniS05_space-other_T2w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-mniS05/anat/sub-mniS05_space-other_T2w_desc-softseg_label-SC_seg.json index e74ad52ef6..23dbd13ead 100644 --- a/derivatives/labels_softseg_bin/sub-mniS05/anat/sub-mniS05_space-other_T2w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-mniS05/anat/sub-mniS05_space-other_T2w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:28" + "Date": "2022-10-22 14:36:28", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-mniS06/anat/sub-mniS06_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-mniS06/anat/sub-mniS06_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json index e74ad52ef6..e33a843259 100644 --- a/derivatives/labels_softseg_bin/sub-mniS06/anat/sub-mniS06_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-mniS06/anat/sub-mniS06_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:28" + "Date": "2022-10-22 14:36:28", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-mniS06/anat/sub-mniS06_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-mniS06/anat/sub-mniS06_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json index e74ad52ef6..e33a843259 100644 --- a/derivatives/labels_softseg_bin/sub-mniS06/anat/sub-mniS06_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-mniS06/anat/sub-mniS06_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:28" + "Date": "2022-10-22 14:36:28", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-mniS06/anat/sub-mniS06_space-other_T1w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-mniS06/anat/sub-mniS06_space-other_T1w_desc-softseg_label-SC_seg.json index e74ad52ef6..6e1ec1fd19 100644 --- a/derivatives/labels_softseg_bin/sub-mniS06/anat/sub-mniS06_space-other_T1w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-mniS06/anat/sub-mniS06_space-other_T1w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:28" + "Date": "2022-10-22 14:36:28", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-mniS06/anat/sub-mniS06_space-other_T2star_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-mniS06/anat/sub-mniS06_space-other_T2star_desc-softseg_label-SC_seg.json index e74ad52ef6..4f4d2f5286 100644 --- a/derivatives/labels_softseg_bin/sub-mniS06/anat/sub-mniS06_space-other_T2star_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-mniS06/anat/sub-mniS06_space-other_T2star_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:28" + "Date": "2022-10-22 14:36:28", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-mniS06/anat/sub-mniS06_space-other_T2w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-mniS06/anat/sub-mniS06_space-other_T2w_desc-softseg_label-SC_seg.json index e74ad52ef6..23dbd13ead 100644 --- a/derivatives/labels_softseg_bin/sub-mniS06/anat/sub-mniS06_space-other_T2w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-mniS06/anat/sub-mniS06_space-other_T2w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:28" + "Date": "2022-10-22 14:36:28", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-mniS07/anat/sub-mniS07_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-mniS07/anat/sub-mniS07_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json index e74ad52ef6..e33a843259 100644 --- a/derivatives/labels_softseg_bin/sub-mniS07/anat/sub-mniS07_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-mniS07/anat/sub-mniS07_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:28" + "Date": "2022-10-22 14:36:28", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-mniS07/anat/sub-mniS07_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-mniS07/anat/sub-mniS07_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json index e74ad52ef6..e33a843259 100644 --- a/derivatives/labels_softseg_bin/sub-mniS07/anat/sub-mniS07_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-mniS07/anat/sub-mniS07_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:28" + "Date": "2022-10-22 14:36:28", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-mniS07/anat/sub-mniS07_space-other_T1w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-mniS07/anat/sub-mniS07_space-other_T1w_desc-softseg_label-SC_seg.json index e74ad52ef6..6e1ec1fd19 100644 --- a/derivatives/labels_softseg_bin/sub-mniS07/anat/sub-mniS07_space-other_T1w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-mniS07/anat/sub-mniS07_space-other_T1w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:28" + "Date": "2022-10-22 14:36:28", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-mniS07/anat/sub-mniS07_space-other_T2star_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-mniS07/anat/sub-mniS07_space-other_T2star_desc-softseg_label-SC_seg.json index e74ad52ef6..4f4d2f5286 100644 --- a/derivatives/labels_softseg_bin/sub-mniS07/anat/sub-mniS07_space-other_T2star_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-mniS07/anat/sub-mniS07_space-other_T2star_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:28" + "Date": "2022-10-22 14:36:28", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-mniS07/anat/sub-mniS07_space-other_T2w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-mniS07/anat/sub-mniS07_space-other_T2w_desc-softseg_label-SC_seg.json index e74ad52ef6..23dbd13ead 100644 --- a/derivatives/labels_softseg_bin/sub-mniS07/anat/sub-mniS07_space-other_T2w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-mniS07/anat/sub-mniS07_space-other_T2w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:28" + "Date": "2022-10-22 14:36:28", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-mniS08/anat/sub-mniS08_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-mniS08/anat/sub-mniS08_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json index e74ad52ef6..e33a843259 100644 --- a/derivatives/labels_softseg_bin/sub-mniS08/anat/sub-mniS08_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-mniS08/anat/sub-mniS08_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:28" + "Date": "2022-10-22 14:36:28", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-mniS08/anat/sub-mniS08_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-mniS08/anat/sub-mniS08_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json index ffe50aeddb..49a4cd4c40 100644 --- a/derivatives/labels_softseg_bin/sub-mniS08/anat/sub-mniS08_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-mniS08/anat/sub-mniS08_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:29" + "Date": "2022-10-22 14:36:29", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-mniS08/anat/sub-mniS08_space-other_T1w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-mniS08/anat/sub-mniS08_space-other_T1w_desc-softseg_label-SC_seg.json index ffe50aeddb..f6646b0059 100644 --- a/derivatives/labels_softseg_bin/sub-mniS08/anat/sub-mniS08_space-other_T1w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-mniS08/anat/sub-mniS08_space-other_T1w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:29" + "Date": "2022-10-22 14:36:29", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-mniS08/anat/sub-mniS08_space-other_T2star_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-mniS08/anat/sub-mniS08_space-other_T2star_desc-softseg_label-SC_seg.json index ffe50aeddb..cd8b25c2e5 100644 --- a/derivatives/labels_softseg_bin/sub-mniS08/anat/sub-mniS08_space-other_T2star_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-mniS08/anat/sub-mniS08_space-other_T2star_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:29" + "Date": "2022-10-22 14:36:29", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-mniS08/anat/sub-mniS08_space-other_T2w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-mniS08/anat/sub-mniS08_space-other_T2w_desc-softseg_label-SC_seg.json index ffe50aeddb..3ca3b7bd82 100644 --- a/derivatives/labels_softseg_bin/sub-mniS08/anat/sub-mniS08_space-other_T2w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-mniS08/anat/sub-mniS08_space-other_T2w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:29" + "Date": "2022-10-22 14:36:29", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-mniS09/anat/sub-mniS09_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-mniS09/anat/sub-mniS09_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json index ffe50aeddb..49a4cd4c40 100644 --- a/derivatives/labels_softseg_bin/sub-mniS09/anat/sub-mniS09_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-mniS09/anat/sub-mniS09_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:29" + "Date": "2022-10-22 14:36:29", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-mniS09/anat/sub-mniS09_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-mniS09/anat/sub-mniS09_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json index ffe50aeddb..49a4cd4c40 100644 --- a/derivatives/labels_softseg_bin/sub-mniS09/anat/sub-mniS09_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-mniS09/anat/sub-mniS09_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:29" + "Date": "2022-10-22 14:36:29", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-mniS09/anat/sub-mniS09_space-other_T1w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-mniS09/anat/sub-mniS09_space-other_T1w_desc-softseg_label-SC_seg.json index ffe50aeddb..f6646b0059 100644 --- a/derivatives/labels_softseg_bin/sub-mniS09/anat/sub-mniS09_space-other_T1w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-mniS09/anat/sub-mniS09_space-other_T1w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:29" + "Date": "2022-10-22 14:36:29", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-mniS09/anat/sub-mniS09_space-other_T2star_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-mniS09/anat/sub-mniS09_space-other_T2star_desc-softseg_label-SC_seg.json index ffe50aeddb..cd8b25c2e5 100644 --- a/derivatives/labels_softseg_bin/sub-mniS09/anat/sub-mniS09_space-other_T2star_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-mniS09/anat/sub-mniS09_space-other_T2star_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:29" + "Date": "2022-10-22 14:36:29", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-mniS09/anat/sub-mniS09_space-other_T2w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-mniS09/anat/sub-mniS09_space-other_T2w_desc-softseg_label-SC_seg.json index ffe50aeddb..3ca3b7bd82 100644 --- a/derivatives/labels_softseg_bin/sub-mniS09/anat/sub-mniS09_space-other_T2w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-mniS09/anat/sub-mniS09_space-other_T2w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:29" + "Date": "2022-10-22 14:36:29", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-mountSinai01/anat/sub-mountSinai01_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-mountSinai01/anat/sub-mountSinai01_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json index ffe50aeddb..49a4cd4c40 100644 --- a/derivatives/labels_softseg_bin/sub-mountSinai01/anat/sub-mountSinai01_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-mountSinai01/anat/sub-mountSinai01_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:29" + "Date": "2022-10-22 14:36:29", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-mountSinai01/anat/sub-mountSinai01_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-mountSinai01/anat/sub-mountSinai01_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json index ffe50aeddb..49a4cd4c40 100644 --- a/derivatives/labels_softseg_bin/sub-mountSinai01/anat/sub-mountSinai01_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-mountSinai01/anat/sub-mountSinai01_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:29" + "Date": "2022-10-22 14:36:29", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-mountSinai01/anat/sub-mountSinai01_space-other_T1w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-mountSinai01/anat/sub-mountSinai01_space-other_T1w_desc-softseg_label-SC_seg.json index ffe50aeddb..f6646b0059 100644 --- a/derivatives/labels_softseg_bin/sub-mountSinai01/anat/sub-mountSinai01_space-other_T1w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-mountSinai01/anat/sub-mountSinai01_space-other_T1w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:29" + "Date": "2022-10-22 14:36:29", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-mountSinai01/anat/sub-mountSinai01_space-other_T2star_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-mountSinai01/anat/sub-mountSinai01_space-other_T2star_desc-softseg_label-SC_seg.json index ffe50aeddb..cd8b25c2e5 100644 --- a/derivatives/labels_softseg_bin/sub-mountSinai01/anat/sub-mountSinai01_space-other_T2star_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-mountSinai01/anat/sub-mountSinai01_space-other_T2star_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:29" + "Date": "2022-10-22 14:36:29", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-mountSinai01/anat/sub-mountSinai01_space-other_T2w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-mountSinai01/anat/sub-mountSinai01_space-other_T2w_desc-softseg_label-SC_seg.json index ffe50aeddb..3ca3b7bd82 100644 --- a/derivatives/labels_softseg_bin/sub-mountSinai01/anat/sub-mountSinai01_space-other_T2w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-mountSinai01/anat/sub-mountSinai01_space-other_T2w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:29" + "Date": "2022-10-22 14:36:29", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-mountSinai02/anat/sub-mountSinai02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-mountSinai02/anat/sub-mountSinai02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json index ffe50aeddb..49a4cd4c40 100644 --- a/derivatives/labels_softseg_bin/sub-mountSinai02/anat/sub-mountSinai02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-mountSinai02/anat/sub-mountSinai02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:29" + "Date": "2022-10-22 14:36:29", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-mountSinai02/anat/sub-mountSinai02_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-mountSinai02/anat/sub-mountSinai02_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json index ffe50aeddb..49a4cd4c40 100644 --- a/derivatives/labels_softseg_bin/sub-mountSinai02/anat/sub-mountSinai02_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-mountSinai02/anat/sub-mountSinai02_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:29" + "Date": "2022-10-22 14:36:29", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-mountSinai02/anat/sub-mountSinai02_space-other_T1w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-mountSinai02/anat/sub-mountSinai02_space-other_T1w_desc-softseg_label-SC_seg.json index ffe50aeddb..f6646b0059 100644 --- a/derivatives/labels_softseg_bin/sub-mountSinai02/anat/sub-mountSinai02_space-other_T1w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-mountSinai02/anat/sub-mountSinai02_space-other_T1w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:29" + "Date": "2022-10-22 14:36:29", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-mountSinai02/anat/sub-mountSinai02_space-other_T2star_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-mountSinai02/anat/sub-mountSinai02_space-other_T2star_desc-softseg_label-SC_seg.json index ffe50aeddb..cd8b25c2e5 100644 --- a/derivatives/labels_softseg_bin/sub-mountSinai02/anat/sub-mountSinai02_space-other_T2star_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-mountSinai02/anat/sub-mountSinai02_space-other_T2star_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:29" + "Date": "2022-10-22 14:36:29", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-mountSinai02/anat/sub-mountSinai02_space-other_T2w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-mountSinai02/anat/sub-mountSinai02_space-other_T2w_desc-softseg_label-SC_seg.json index ffe50aeddb..3ca3b7bd82 100644 --- a/derivatives/labels_softseg_bin/sub-mountSinai02/anat/sub-mountSinai02_space-other_T2w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-mountSinai02/anat/sub-mountSinai02_space-other_T2w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:29" + "Date": "2022-10-22 14:36:29", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-mountSinai04/anat/sub-mountSinai04_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-mountSinai04/anat/sub-mountSinai04_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json index 48481e7812..4622d61854 100644 --- a/derivatives/labels_softseg_bin/sub-mountSinai04/anat/sub-mountSinai04_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-mountSinai04/anat/sub-mountSinai04_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:30" + "Date": "2022-10-22 14:36:30", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-mountSinai04/anat/sub-mountSinai04_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-mountSinai04/anat/sub-mountSinai04_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json index 48481e7812..4622d61854 100644 --- a/derivatives/labels_softseg_bin/sub-mountSinai04/anat/sub-mountSinai04_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-mountSinai04/anat/sub-mountSinai04_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:30" + "Date": "2022-10-22 14:36:30", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-mountSinai04/anat/sub-mountSinai04_space-other_T1w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-mountSinai04/anat/sub-mountSinai04_space-other_T1w_desc-softseg_label-SC_seg.json index 48481e7812..79ff860e6c 100644 --- a/derivatives/labels_softseg_bin/sub-mountSinai04/anat/sub-mountSinai04_space-other_T1w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-mountSinai04/anat/sub-mountSinai04_space-other_T1w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:30" + "Date": "2022-10-22 14:36:30", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-mountSinai04/anat/sub-mountSinai04_space-other_T2star_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-mountSinai04/anat/sub-mountSinai04_space-other_T2star_desc-softseg_label-SC_seg.json index 48481e7812..13e846286e 100644 --- a/derivatives/labels_softseg_bin/sub-mountSinai04/anat/sub-mountSinai04_space-other_T2star_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-mountSinai04/anat/sub-mountSinai04_space-other_T2star_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:30" + "Date": "2022-10-22 14:36:30", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-mountSinai04/anat/sub-mountSinai04_space-other_T2w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-mountSinai04/anat/sub-mountSinai04_space-other_T2w_desc-softseg_label-SC_seg.json index 48481e7812..42d532c9d8 100644 --- a/derivatives/labels_softseg_bin/sub-mountSinai04/anat/sub-mountSinai04_space-other_T2w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-mountSinai04/anat/sub-mountSinai04_space-other_T2w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:30" + "Date": "2022-10-22 14:36:30", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-mountSinai05/anat/sub-mountSinai05_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-mountSinai05/anat/sub-mountSinai05_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json index 48481e7812..4622d61854 100644 --- a/derivatives/labels_softseg_bin/sub-mountSinai05/anat/sub-mountSinai05_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-mountSinai05/anat/sub-mountSinai05_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:30" + "Date": "2022-10-22 14:36:30", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-mountSinai05/anat/sub-mountSinai05_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-mountSinai05/anat/sub-mountSinai05_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json index 48481e7812..4622d61854 100644 --- a/derivatives/labels_softseg_bin/sub-mountSinai05/anat/sub-mountSinai05_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-mountSinai05/anat/sub-mountSinai05_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:30" + "Date": "2022-10-22 14:36:30", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-mountSinai05/anat/sub-mountSinai05_space-other_T1w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-mountSinai05/anat/sub-mountSinai05_space-other_T1w_desc-softseg_label-SC_seg.json index 48481e7812..79ff860e6c 100644 --- a/derivatives/labels_softseg_bin/sub-mountSinai05/anat/sub-mountSinai05_space-other_T1w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-mountSinai05/anat/sub-mountSinai05_space-other_T1w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:30" + "Date": "2022-10-22 14:36:30", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-mountSinai05/anat/sub-mountSinai05_space-other_T2star_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-mountSinai05/anat/sub-mountSinai05_space-other_T2star_desc-softseg_label-SC_seg.json index 48481e7812..13e846286e 100644 --- a/derivatives/labels_softseg_bin/sub-mountSinai05/anat/sub-mountSinai05_space-other_T2star_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-mountSinai05/anat/sub-mountSinai05_space-other_T2star_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:30" + "Date": "2022-10-22 14:36:30", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-mountSinai05/anat/sub-mountSinai05_space-other_T2w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-mountSinai05/anat/sub-mountSinai05_space-other_T2w_desc-softseg_label-SC_seg.json index 48481e7812..42d532c9d8 100644 --- a/derivatives/labels_softseg_bin/sub-mountSinai05/anat/sub-mountSinai05_space-other_T2w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-mountSinai05/anat/sub-mountSinai05_space-other_T2w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:30" + "Date": "2022-10-22 14:36:30", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-mountSinai06/anat/sub-mountSinai06_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-mountSinai06/anat/sub-mountSinai06_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json index 48481e7812..4622d61854 100644 --- a/derivatives/labels_softseg_bin/sub-mountSinai06/anat/sub-mountSinai06_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-mountSinai06/anat/sub-mountSinai06_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:30" + "Date": "2022-10-22 14:36:30", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-mountSinai06/anat/sub-mountSinai06_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-mountSinai06/anat/sub-mountSinai06_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json index 48481e7812..4622d61854 100644 --- a/derivatives/labels_softseg_bin/sub-mountSinai06/anat/sub-mountSinai06_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-mountSinai06/anat/sub-mountSinai06_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:30" + "Date": "2022-10-22 14:36:30", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-mountSinai06/anat/sub-mountSinai06_space-other_T1w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-mountSinai06/anat/sub-mountSinai06_space-other_T1w_desc-softseg_label-SC_seg.json index 48481e7812..79ff860e6c 100644 --- a/derivatives/labels_softseg_bin/sub-mountSinai06/anat/sub-mountSinai06_space-other_T1w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-mountSinai06/anat/sub-mountSinai06_space-other_T1w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:30" + "Date": "2022-10-22 14:36:30", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-mountSinai06/anat/sub-mountSinai06_space-other_T2star_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-mountSinai06/anat/sub-mountSinai06_space-other_T2star_desc-softseg_label-SC_seg.json index 48481e7812..13e846286e 100644 --- a/derivatives/labels_softseg_bin/sub-mountSinai06/anat/sub-mountSinai06_space-other_T2star_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-mountSinai06/anat/sub-mountSinai06_space-other_T2star_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:30" + "Date": "2022-10-22 14:36:30", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-mountSinai06/anat/sub-mountSinai06_space-other_T2w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-mountSinai06/anat/sub-mountSinai06_space-other_T2w_desc-softseg_label-SC_seg.json index 48481e7812..42d532c9d8 100644 --- a/derivatives/labels_softseg_bin/sub-mountSinai06/anat/sub-mountSinai06_space-other_T2w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-mountSinai06/anat/sub-mountSinai06_space-other_T2w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:30" + "Date": "2022-10-22 14:36:30", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-mpicbs01/anat/sub-mpicbs01_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-mpicbs01/anat/sub-mpicbs01_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json index 48481e7812..4622d61854 100644 --- a/derivatives/labels_softseg_bin/sub-mpicbs01/anat/sub-mpicbs01_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-mpicbs01/anat/sub-mpicbs01_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:30" + "Date": "2022-10-22 14:36:30", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-mpicbs01/anat/sub-mpicbs01_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-mpicbs01/anat/sub-mpicbs01_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json index 48481e7812..4622d61854 100644 --- a/derivatives/labels_softseg_bin/sub-mpicbs01/anat/sub-mpicbs01_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-mpicbs01/anat/sub-mpicbs01_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:30" + "Date": "2022-10-22 14:36:30", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-mpicbs01/anat/sub-mpicbs01_space-other_T1w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-mpicbs01/anat/sub-mpicbs01_space-other_T1w_desc-softseg_label-SC_seg.json index 48481e7812..79ff860e6c 100644 --- a/derivatives/labels_softseg_bin/sub-mpicbs01/anat/sub-mpicbs01_space-other_T1w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-mpicbs01/anat/sub-mpicbs01_space-other_T1w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:30" + "Date": "2022-10-22 14:36:30", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-mpicbs01/anat/sub-mpicbs01_space-other_T2star_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-mpicbs01/anat/sub-mpicbs01_space-other_T2star_desc-softseg_label-SC_seg.json index 48481e7812..13e846286e 100644 --- a/derivatives/labels_softseg_bin/sub-mpicbs01/anat/sub-mpicbs01_space-other_T2star_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-mpicbs01/anat/sub-mpicbs01_space-other_T2star_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:30" + "Date": "2022-10-22 14:36:30", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-mpicbs01/anat/sub-mpicbs01_space-other_T2w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-mpicbs01/anat/sub-mpicbs01_space-other_T2w_desc-softseg_label-SC_seg.json index 48481e7812..42d532c9d8 100644 --- a/derivatives/labels_softseg_bin/sub-mpicbs01/anat/sub-mpicbs01_space-other_T2w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-mpicbs01/anat/sub-mpicbs01_space-other_T2w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:30" + "Date": "2022-10-22 14:36:30", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-mpicbs02/anat/sub-mpicbs02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-mpicbs02/anat/sub-mpicbs02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json index ea20796b63..bbe16d664f 100644 --- a/derivatives/labels_softseg_bin/sub-mpicbs02/anat/sub-mpicbs02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-mpicbs02/anat/sub-mpicbs02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:31" + "Date": "2022-10-22 14:36:31", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-mpicbs02/anat/sub-mpicbs02_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-mpicbs02/anat/sub-mpicbs02_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json index ea20796b63..bbe16d664f 100644 --- a/derivatives/labels_softseg_bin/sub-mpicbs02/anat/sub-mpicbs02_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-mpicbs02/anat/sub-mpicbs02_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:31" + "Date": "2022-10-22 14:36:31", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-mpicbs02/anat/sub-mpicbs02_space-other_T1w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-mpicbs02/anat/sub-mpicbs02_space-other_T1w_desc-softseg_label-SC_seg.json index ea20796b63..c70846a627 100644 --- a/derivatives/labels_softseg_bin/sub-mpicbs02/anat/sub-mpicbs02_space-other_T1w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-mpicbs02/anat/sub-mpicbs02_space-other_T1w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:31" + "Date": "2022-10-22 14:36:31", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-mpicbs02/anat/sub-mpicbs02_space-other_T2star_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-mpicbs02/anat/sub-mpicbs02_space-other_T2star_desc-softseg_label-SC_seg.json index ea20796b63..cf5cdeaef7 100644 --- a/derivatives/labels_softseg_bin/sub-mpicbs02/anat/sub-mpicbs02_space-other_T2star_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-mpicbs02/anat/sub-mpicbs02_space-other_T2star_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:31" + "Date": "2022-10-22 14:36:31", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-mpicbs02/anat/sub-mpicbs02_space-other_T2w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-mpicbs02/anat/sub-mpicbs02_space-other_T2w_desc-softseg_label-SC_seg.json index ea20796b63..f5f4093ec6 100644 --- a/derivatives/labels_softseg_bin/sub-mpicbs02/anat/sub-mpicbs02_space-other_T2w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-mpicbs02/anat/sub-mpicbs02_space-other_T2w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:31" + "Date": "2022-10-22 14:36:31", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-mpicbs03/anat/sub-mpicbs03_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-mpicbs03/anat/sub-mpicbs03_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json index ea20796b63..bbe16d664f 100644 --- a/derivatives/labels_softseg_bin/sub-mpicbs03/anat/sub-mpicbs03_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-mpicbs03/anat/sub-mpicbs03_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:31" + "Date": "2022-10-22 14:36:31", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-mpicbs03/anat/sub-mpicbs03_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-mpicbs03/anat/sub-mpicbs03_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json index ea20796b63..bbe16d664f 100644 --- a/derivatives/labels_softseg_bin/sub-mpicbs03/anat/sub-mpicbs03_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-mpicbs03/anat/sub-mpicbs03_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:31" + "Date": "2022-10-22 14:36:31", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-mpicbs03/anat/sub-mpicbs03_space-other_T1w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-mpicbs03/anat/sub-mpicbs03_space-other_T1w_desc-softseg_label-SC_seg.json index ea20796b63..c70846a627 100644 --- a/derivatives/labels_softseg_bin/sub-mpicbs03/anat/sub-mpicbs03_space-other_T1w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-mpicbs03/anat/sub-mpicbs03_space-other_T1w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:31" + "Date": "2022-10-22 14:36:31", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-mpicbs03/anat/sub-mpicbs03_space-other_T2star_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-mpicbs03/anat/sub-mpicbs03_space-other_T2star_desc-softseg_label-SC_seg.json index ea20796b63..cf5cdeaef7 100644 --- a/derivatives/labels_softseg_bin/sub-mpicbs03/anat/sub-mpicbs03_space-other_T2star_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-mpicbs03/anat/sub-mpicbs03_space-other_T2star_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:31" + "Date": "2022-10-22 14:36:31", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-mpicbs03/anat/sub-mpicbs03_space-other_T2w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-mpicbs03/anat/sub-mpicbs03_space-other_T2w_desc-softseg_label-SC_seg.json index ea20796b63..f5f4093ec6 100644 --- a/derivatives/labels_softseg_bin/sub-mpicbs03/anat/sub-mpicbs03_space-other_T2w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-mpicbs03/anat/sub-mpicbs03_space-other_T2w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:31" + "Date": "2022-10-22 14:36:31", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-mpicbs05/anat/sub-mpicbs05_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-mpicbs05/anat/sub-mpicbs05_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json index ea20796b63..bbe16d664f 100644 --- a/derivatives/labels_softseg_bin/sub-mpicbs05/anat/sub-mpicbs05_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-mpicbs05/anat/sub-mpicbs05_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:31" + "Date": "2022-10-22 14:36:31", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-mpicbs05/anat/sub-mpicbs05_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-mpicbs05/anat/sub-mpicbs05_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json index ea20796b63..bbe16d664f 100644 --- a/derivatives/labels_softseg_bin/sub-mpicbs05/anat/sub-mpicbs05_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-mpicbs05/anat/sub-mpicbs05_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:31" + "Date": "2022-10-22 14:36:31", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-mpicbs05/anat/sub-mpicbs05_space-other_T1w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-mpicbs05/anat/sub-mpicbs05_space-other_T1w_desc-softseg_label-SC_seg.json index ea20796b63..c70846a627 100644 --- a/derivatives/labels_softseg_bin/sub-mpicbs05/anat/sub-mpicbs05_space-other_T1w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-mpicbs05/anat/sub-mpicbs05_space-other_T1w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:31" + "Date": "2022-10-22 14:36:31", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-mpicbs05/anat/sub-mpicbs05_space-other_T2star_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-mpicbs05/anat/sub-mpicbs05_space-other_T2star_desc-softseg_label-SC_seg.json index ea20796b63..cf5cdeaef7 100644 --- a/derivatives/labels_softseg_bin/sub-mpicbs05/anat/sub-mpicbs05_space-other_T2star_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-mpicbs05/anat/sub-mpicbs05_space-other_T2star_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:31" + "Date": "2022-10-22 14:36:31", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-mpicbs05/anat/sub-mpicbs05_space-other_T2w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-mpicbs05/anat/sub-mpicbs05_space-other_T2w_desc-softseg_label-SC_seg.json index ea20796b63..f5f4093ec6 100644 --- a/derivatives/labels_softseg_bin/sub-mpicbs05/anat/sub-mpicbs05_space-other_T2w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-mpicbs05/anat/sub-mpicbs05_space-other_T2w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:31" + "Date": "2022-10-22 14:36:31", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-mpicbs06/anat/sub-mpicbs06_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-mpicbs06/anat/sub-mpicbs06_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json index aa0f5abf87..fde4070eba 100644 --- a/derivatives/labels_softseg_bin/sub-mpicbs06/anat/sub-mpicbs06_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-mpicbs06/anat/sub-mpicbs06_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:32" + "Date": "2022-10-22 14:36:32", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-mpicbs06/anat/sub-mpicbs06_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-mpicbs06/anat/sub-mpicbs06_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json index aa0f5abf87..fde4070eba 100644 --- a/derivatives/labels_softseg_bin/sub-mpicbs06/anat/sub-mpicbs06_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-mpicbs06/anat/sub-mpicbs06_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:32" + "Date": "2022-10-22 14:36:32", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-mpicbs06/anat/sub-mpicbs06_space-other_T1w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-mpicbs06/anat/sub-mpicbs06_space-other_T1w_desc-softseg_label-SC_seg.json index aa0f5abf87..58cfdeeea6 100644 --- a/derivatives/labels_softseg_bin/sub-mpicbs06/anat/sub-mpicbs06_space-other_T1w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-mpicbs06/anat/sub-mpicbs06_space-other_T1w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:32" + "Date": "2022-10-22 14:36:32", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-mpicbs06/anat/sub-mpicbs06_space-other_T2star_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-mpicbs06/anat/sub-mpicbs06_space-other_T2star_desc-softseg_label-SC_seg.json index aa0f5abf87..d7d971187e 100644 --- a/derivatives/labels_softseg_bin/sub-mpicbs06/anat/sub-mpicbs06_space-other_T2star_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-mpicbs06/anat/sub-mpicbs06_space-other_T2star_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:32" + "Date": "2022-10-22 14:36:32", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-mpicbs06/anat/sub-mpicbs06_space-other_T2w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-mpicbs06/anat/sub-mpicbs06_space-other_T2w_desc-softseg_label-SC_seg.json index aa0f5abf87..3c115eafdb 100644 --- a/derivatives/labels_softseg_bin/sub-mpicbs06/anat/sub-mpicbs06_space-other_T2w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-mpicbs06/anat/sub-mpicbs06_space-other_T2w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:32" + "Date": "2022-10-22 14:36:32", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-mpicbs07/anat/sub-mpicbs07_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-mpicbs07/anat/sub-mpicbs07_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json index aa0f5abf87..fde4070eba 100644 --- a/derivatives/labels_softseg_bin/sub-mpicbs07/anat/sub-mpicbs07_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-mpicbs07/anat/sub-mpicbs07_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:32" + "Date": "2022-10-22 14:36:32", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-mpicbs07/anat/sub-mpicbs07_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-mpicbs07/anat/sub-mpicbs07_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json index aa0f5abf87..fde4070eba 100644 --- a/derivatives/labels_softseg_bin/sub-mpicbs07/anat/sub-mpicbs07_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-mpicbs07/anat/sub-mpicbs07_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:32" + "Date": "2022-10-22 14:36:32", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-mpicbs07/anat/sub-mpicbs07_space-other_T1w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-mpicbs07/anat/sub-mpicbs07_space-other_T1w_desc-softseg_label-SC_seg.json index aa0f5abf87..58cfdeeea6 100644 --- a/derivatives/labels_softseg_bin/sub-mpicbs07/anat/sub-mpicbs07_space-other_T1w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-mpicbs07/anat/sub-mpicbs07_space-other_T1w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:32" + "Date": "2022-10-22 14:36:32", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-mpicbs07/anat/sub-mpicbs07_space-other_T2star_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-mpicbs07/anat/sub-mpicbs07_space-other_T2star_desc-softseg_label-SC_seg.json index aa0f5abf87..d7d971187e 100644 --- a/derivatives/labels_softseg_bin/sub-mpicbs07/anat/sub-mpicbs07_space-other_T2star_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-mpicbs07/anat/sub-mpicbs07_space-other_T2star_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:32" + "Date": "2022-10-22 14:36:32", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-mpicbs07/anat/sub-mpicbs07_space-other_T2w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-mpicbs07/anat/sub-mpicbs07_space-other_T2w_desc-softseg_label-SC_seg.json index aa0f5abf87..3c115eafdb 100644 --- a/derivatives/labels_softseg_bin/sub-mpicbs07/anat/sub-mpicbs07_space-other_T2w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-mpicbs07/anat/sub-mpicbs07_space-other_T2w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:32" + "Date": "2022-10-22 14:36:32", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-nottwil01/anat/sub-nottwil01_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-nottwil01/anat/sub-nottwil01_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json index aa0f5abf87..fde4070eba 100644 --- a/derivatives/labels_softseg_bin/sub-nottwil01/anat/sub-nottwil01_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-nottwil01/anat/sub-nottwil01_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:32" + "Date": "2022-10-22 14:36:32", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-nottwil01/anat/sub-nottwil01_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-nottwil01/anat/sub-nottwil01_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json index aa0f5abf87..fde4070eba 100644 --- a/derivatives/labels_softseg_bin/sub-nottwil01/anat/sub-nottwil01_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-nottwil01/anat/sub-nottwil01_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:32" + "Date": "2022-10-22 14:36:32", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-nottwil01/anat/sub-nottwil01_space-other_T1w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-nottwil01/anat/sub-nottwil01_space-other_T1w_desc-softseg_label-SC_seg.json index aa0f5abf87..58cfdeeea6 100644 --- a/derivatives/labels_softseg_bin/sub-nottwil01/anat/sub-nottwil01_space-other_T1w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-nottwil01/anat/sub-nottwil01_space-other_T1w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:32" + "Date": "2022-10-22 14:36:32", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-nottwil01/anat/sub-nottwil01_space-other_T2star_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-nottwil01/anat/sub-nottwil01_space-other_T2star_desc-softseg_label-SC_seg.json index aa0f5abf87..d7d971187e 100644 --- a/derivatives/labels_softseg_bin/sub-nottwil01/anat/sub-nottwil01_space-other_T2star_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-nottwil01/anat/sub-nottwil01_space-other_T2star_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:32" + "Date": "2022-10-22 14:36:32", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-nottwil01/anat/sub-nottwil01_space-other_T2w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-nottwil01/anat/sub-nottwil01_space-other_T2w_desc-softseg_label-SC_seg.json index aa0f5abf87..3c115eafdb 100644 --- a/derivatives/labels_softseg_bin/sub-nottwil01/anat/sub-nottwil01_space-other_T2w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-nottwil01/anat/sub-nottwil01_space-other_T2w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:32" + "Date": "2022-10-22 14:36:32", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-nottwil02/anat/sub-nottwil02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-nottwil02/anat/sub-nottwil02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json index aa0f5abf87..fde4070eba 100644 --- a/derivatives/labels_softseg_bin/sub-nottwil02/anat/sub-nottwil02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-nottwil02/anat/sub-nottwil02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:32" + "Date": "2022-10-22 14:36:32", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-nottwil02/anat/sub-nottwil02_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-nottwil02/anat/sub-nottwil02_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json index aa0f5abf87..fde4070eba 100644 --- a/derivatives/labels_softseg_bin/sub-nottwil02/anat/sub-nottwil02_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-nottwil02/anat/sub-nottwil02_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:32" + "Date": "2022-10-22 14:36:32", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-nottwil02/anat/sub-nottwil02_space-other_T1w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-nottwil02/anat/sub-nottwil02_space-other_T1w_desc-softseg_label-SC_seg.json index aa0f5abf87..58cfdeeea6 100644 --- a/derivatives/labels_softseg_bin/sub-nottwil02/anat/sub-nottwil02_space-other_T1w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-nottwil02/anat/sub-nottwil02_space-other_T1w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:32" + "Date": "2022-10-22 14:36:32", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-nottwil02/anat/sub-nottwil02_space-other_T2star_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-nottwil02/anat/sub-nottwil02_space-other_T2star_desc-softseg_label-SC_seg.json index 09fb2b06c7..dffadbfef5 100644 --- a/derivatives/labels_softseg_bin/sub-nottwil02/anat/sub-nottwil02_space-other_T2star_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-nottwil02/anat/sub-nottwil02_space-other_T2star_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:33" + "Date": "2022-10-22 14:36:33", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-nottwil02/anat/sub-nottwil02_space-other_T2w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-nottwil02/anat/sub-nottwil02_space-other_T2w_desc-softseg_label-SC_seg.json index 09fb2b06c7..c8e383258d 100644 --- a/derivatives/labels_softseg_bin/sub-nottwil02/anat/sub-nottwil02_space-other_T2w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-nottwil02/anat/sub-nottwil02_space-other_T2w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:33" + "Date": "2022-10-22 14:36:33", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-nottwil03/anat/sub-nottwil03_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-nottwil03/anat/sub-nottwil03_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json index 09fb2b06c7..cdca1220a9 100644 --- a/derivatives/labels_softseg_bin/sub-nottwil03/anat/sub-nottwil03_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-nottwil03/anat/sub-nottwil03_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:33" + "Date": "2022-10-22 14:36:33", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-nottwil03/anat/sub-nottwil03_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-nottwil03/anat/sub-nottwil03_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json index 09fb2b06c7..cdca1220a9 100644 --- a/derivatives/labels_softseg_bin/sub-nottwil03/anat/sub-nottwil03_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-nottwil03/anat/sub-nottwil03_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:33" + "Date": "2022-10-22 14:36:33", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-nottwil03/anat/sub-nottwil03_space-other_T1w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-nottwil03/anat/sub-nottwil03_space-other_T1w_desc-softseg_label-SC_seg.json index 09fb2b06c7..2f00d7c9e7 100644 --- a/derivatives/labels_softseg_bin/sub-nottwil03/anat/sub-nottwil03_space-other_T1w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-nottwil03/anat/sub-nottwil03_space-other_T1w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:33" + "Date": "2022-10-22 14:36:33", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-nottwil03/anat/sub-nottwil03_space-other_T2star_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-nottwil03/anat/sub-nottwil03_space-other_T2star_desc-softseg_label-SC_seg.json index 09fb2b06c7..dffadbfef5 100644 --- a/derivatives/labels_softseg_bin/sub-nottwil03/anat/sub-nottwil03_space-other_T2star_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-nottwil03/anat/sub-nottwil03_space-other_T2star_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:33" + "Date": "2022-10-22 14:36:33", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-nottwil03/anat/sub-nottwil03_space-other_T2w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-nottwil03/anat/sub-nottwil03_space-other_T2w_desc-softseg_label-SC_seg.json index 09fb2b06c7..c8e383258d 100644 --- a/derivatives/labels_softseg_bin/sub-nottwil03/anat/sub-nottwil03_space-other_T2w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-nottwil03/anat/sub-nottwil03_space-other_T2w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:33" + "Date": "2022-10-22 14:36:33", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-nottwil04/anat/sub-nottwil04_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-nottwil04/anat/sub-nottwil04_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json index 09fb2b06c7..cdca1220a9 100644 --- a/derivatives/labels_softseg_bin/sub-nottwil04/anat/sub-nottwil04_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-nottwil04/anat/sub-nottwil04_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:33" + "Date": "2022-10-22 14:36:33", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-nottwil04/anat/sub-nottwil04_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-nottwil04/anat/sub-nottwil04_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json index 09fb2b06c7..cdca1220a9 100644 --- a/derivatives/labels_softseg_bin/sub-nottwil04/anat/sub-nottwil04_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-nottwil04/anat/sub-nottwil04_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:33" + "Date": "2022-10-22 14:36:33", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-nottwil04/anat/sub-nottwil04_space-other_T1w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-nottwil04/anat/sub-nottwil04_space-other_T1w_desc-softseg_label-SC_seg.json index 09fb2b06c7..2f00d7c9e7 100644 --- a/derivatives/labels_softseg_bin/sub-nottwil04/anat/sub-nottwil04_space-other_T1w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-nottwil04/anat/sub-nottwil04_space-other_T1w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:33" + "Date": "2022-10-22 14:36:33", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-nottwil04/anat/sub-nottwil04_space-other_T2star_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-nottwil04/anat/sub-nottwil04_space-other_T2star_desc-softseg_label-SC_seg.json index 09fb2b06c7..dffadbfef5 100644 --- a/derivatives/labels_softseg_bin/sub-nottwil04/anat/sub-nottwil04_space-other_T2star_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-nottwil04/anat/sub-nottwil04_space-other_T2star_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:33" + "Date": "2022-10-22 14:36:33", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-nottwil04/anat/sub-nottwil04_space-other_T2w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-nottwil04/anat/sub-nottwil04_space-other_T2w_desc-softseg_label-SC_seg.json index 09fb2b06c7..c8e383258d 100644 --- a/derivatives/labels_softseg_bin/sub-nottwil04/anat/sub-nottwil04_space-other_T2w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-nottwil04/anat/sub-nottwil04_space-other_T2w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:33" + "Date": "2022-10-22 14:36:33", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-nottwil05/anat/sub-nottwil05_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-nottwil05/anat/sub-nottwil05_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json index 09fb2b06c7..cdca1220a9 100644 --- a/derivatives/labels_softseg_bin/sub-nottwil05/anat/sub-nottwil05_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-nottwil05/anat/sub-nottwil05_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:33" + "Date": "2022-10-22 14:36:33", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-nottwil05/anat/sub-nottwil05_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-nottwil05/anat/sub-nottwil05_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json index 09fb2b06c7..cdca1220a9 100644 --- a/derivatives/labels_softseg_bin/sub-nottwil05/anat/sub-nottwil05_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-nottwil05/anat/sub-nottwil05_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:33" + "Date": "2022-10-22 14:36:33", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-nottwil05/anat/sub-nottwil05_space-other_T1w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-nottwil05/anat/sub-nottwil05_space-other_T1w_desc-softseg_label-SC_seg.json index 09fb2b06c7..2f00d7c9e7 100644 --- a/derivatives/labels_softseg_bin/sub-nottwil05/anat/sub-nottwil05_space-other_T1w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-nottwil05/anat/sub-nottwil05_space-other_T1w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:33" + "Date": "2022-10-22 14:36:33", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-nottwil05/anat/sub-nottwil05_space-other_T2star_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-nottwil05/anat/sub-nottwil05_space-other_T2star_desc-softseg_label-SC_seg.json index 09fb2b06c7..dffadbfef5 100644 --- a/derivatives/labels_softseg_bin/sub-nottwil05/anat/sub-nottwil05_space-other_T2star_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-nottwil05/anat/sub-nottwil05_space-other_T2star_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:33" + "Date": "2022-10-22 14:36:33", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-nottwil05/anat/sub-nottwil05_space-other_T2w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-nottwil05/anat/sub-nottwil05_space-other_T2w_desc-softseg_label-SC_seg.json index 09fb2b06c7..c8e383258d 100644 --- a/derivatives/labels_softseg_bin/sub-nottwil05/anat/sub-nottwil05_space-other_T2w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-nottwil05/anat/sub-nottwil05_space-other_T2w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:33" + "Date": "2022-10-22 14:36:33", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-nottwil06/anat/sub-nottwil06_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-nottwil06/anat/sub-nottwil06_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json index 09fb2b06c7..cdca1220a9 100644 --- a/derivatives/labels_softseg_bin/sub-nottwil06/anat/sub-nottwil06_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-nottwil06/anat/sub-nottwil06_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:33" + "Date": "2022-10-22 14:36:33", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-nottwil06/anat/sub-nottwil06_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-nottwil06/anat/sub-nottwil06_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json index 09fb2b06c7..cdca1220a9 100644 --- a/derivatives/labels_softseg_bin/sub-nottwil06/anat/sub-nottwil06_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-nottwil06/anat/sub-nottwil06_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:33" + "Date": "2022-10-22 14:36:33", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-nottwil06/anat/sub-nottwil06_space-other_T1w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-nottwil06/anat/sub-nottwil06_space-other_T1w_desc-softseg_label-SC_seg.json index 8eed774096..1c366c5294 100644 --- a/derivatives/labels_softseg_bin/sub-nottwil06/anat/sub-nottwil06_space-other_T1w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-nottwil06/anat/sub-nottwil06_space-other_T1w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:34" + "Date": "2022-10-22 14:36:34", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-nottwil06/anat/sub-nottwil06_space-other_T2star_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-nottwil06/anat/sub-nottwil06_space-other_T2star_desc-softseg_label-SC_seg.json index 8eed774096..731738220c 100644 --- a/derivatives/labels_softseg_bin/sub-nottwil06/anat/sub-nottwil06_space-other_T2star_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-nottwil06/anat/sub-nottwil06_space-other_T2star_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:34" + "Date": "2022-10-22 14:36:34", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-nottwil06/anat/sub-nottwil06_space-other_T2w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-nottwil06/anat/sub-nottwil06_space-other_T2w_desc-softseg_label-SC_seg.json index 8eed774096..d441404268 100644 --- a/derivatives/labels_softseg_bin/sub-nottwil06/anat/sub-nottwil06_space-other_T2w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-nottwil06/anat/sub-nottwil06_space-other_T2w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:34" + "Date": "2022-10-22 14:36:34", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-nwu01/anat/sub-nwu01_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-nwu01/anat/sub-nwu01_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json index 8eed774096..f76d236e16 100644 --- a/derivatives/labels_softseg_bin/sub-nwu01/anat/sub-nwu01_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-nwu01/anat/sub-nwu01_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:34" + "Date": "2022-10-22 14:36:34", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-nwu01/anat/sub-nwu01_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-nwu01/anat/sub-nwu01_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json index 8eed774096..f76d236e16 100644 --- a/derivatives/labels_softseg_bin/sub-nwu01/anat/sub-nwu01_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-nwu01/anat/sub-nwu01_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:34" + "Date": "2022-10-22 14:36:34", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-nwu01/anat/sub-nwu01_space-other_T1w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-nwu01/anat/sub-nwu01_space-other_T1w_desc-softseg_label-SC_seg.json index 8eed774096..1c366c5294 100644 --- a/derivatives/labels_softseg_bin/sub-nwu01/anat/sub-nwu01_space-other_T1w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-nwu01/anat/sub-nwu01_space-other_T1w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:34" + "Date": "2022-10-22 14:36:34", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-nwu01/anat/sub-nwu01_space-other_T2star_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-nwu01/anat/sub-nwu01_space-other_T2star_desc-softseg_label-SC_seg.json index 8eed774096..731738220c 100644 --- a/derivatives/labels_softseg_bin/sub-nwu01/anat/sub-nwu01_space-other_T2star_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-nwu01/anat/sub-nwu01_space-other_T2star_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:34" + "Date": "2022-10-22 14:36:34", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-nwu01/anat/sub-nwu01_space-other_T2w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-nwu01/anat/sub-nwu01_space-other_T2w_desc-softseg_label-SC_seg.json index 8eed774096..d441404268 100644 --- a/derivatives/labels_softseg_bin/sub-nwu01/anat/sub-nwu01_space-other_T2w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-nwu01/anat/sub-nwu01_space-other_T2w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:34" + "Date": "2022-10-22 14:36:34", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-nwu02/anat/sub-nwu02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-nwu02/anat/sub-nwu02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json index 8eed774096..f76d236e16 100644 --- a/derivatives/labels_softseg_bin/sub-nwu02/anat/sub-nwu02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-nwu02/anat/sub-nwu02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:34" + "Date": "2022-10-22 14:36:34", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-nwu02/anat/sub-nwu02_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-nwu02/anat/sub-nwu02_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json index 8eed774096..f76d236e16 100644 --- a/derivatives/labels_softseg_bin/sub-nwu02/anat/sub-nwu02_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-nwu02/anat/sub-nwu02_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:34" + "Date": "2022-10-22 14:36:34", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-nwu02/anat/sub-nwu02_space-other_T1w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-nwu02/anat/sub-nwu02_space-other_T1w_desc-softseg_label-SC_seg.json index 8eed774096..1c366c5294 100644 --- a/derivatives/labels_softseg_bin/sub-nwu02/anat/sub-nwu02_space-other_T1w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-nwu02/anat/sub-nwu02_space-other_T1w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:34" + "Date": "2022-10-22 14:36:34", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-nwu02/anat/sub-nwu02_space-other_T2star_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-nwu02/anat/sub-nwu02_space-other_T2star_desc-softseg_label-SC_seg.json index 8eed774096..731738220c 100644 --- a/derivatives/labels_softseg_bin/sub-nwu02/anat/sub-nwu02_space-other_T2star_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-nwu02/anat/sub-nwu02_space-other_T2star_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:34" + "Date": "2022-10-22 14:36:34", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-nwu02/anat/sub-nwu02_space-other_T2w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-nwu02/anat/sub-nwu02_space-other_T2w_desc-softseg_label-SC_seg.json index 8eed774096..d441404268 100644 --- a/derivatives/labels_softseg_bin/sub-nwu02/anat/sub-nwu02_space-other_T2w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-nwu02/anat/sub-nwu02_space-other_T2w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:34" + "Date": "2022-10-22 14:36:34", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-nwu03/anat/sub-nwu03_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-nwu03/anat/sub-nwu03_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json index 8eed774096..f76d236e16 100644 --- a/derivatives/labels_softseg_bin/sub-nwu03/anat/sub-nwu03_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-nwu03/anat/sub-nwu03_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:34" + "Date": "2022-10-22 14:36:34", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-nwu03/anat/sub-nwu03_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-nwu03/anat/sub-nwu03_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json index 8eed774096..f76d236e16 100644 --- a/derivatives/labels_softseg_bin/sub-nwu03/anat/sub-nwu03_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-nwu03/anat/sub-nwu03_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:34" + "Date": "2022-10-22 14:36:34", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-nwu03/anat/sub-nwu03_space-other_T1w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-nwu03/anat/sub-nwu03_space-other_T1w_desc-softseg_label-SC_seg.json index 8eed774096..1c366c5294 100644 --- a/derivatives/labels_softseg_bin/sub-nwu03/anat/sub-nwu03_space-other_T1w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-nwu03/anat/sub-nwu03_space-other_T1w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:34" + "Date": "2022-10-22 14:36:34", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-nwu03/anat/sub-nwu03_space-other_T2star_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-nwu03/anat/sub-nwu03_space-other_T2star_desc-softseg_label-SC_seg.json index 8eed774096..731738220c 100644 --- a/derivatives/labels_softseg_bin/sub-nwu03/anat/sub-nwu03_space-other_T2star_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-nwu03/anat/sub-nwu03_space-other_T2star_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:34" + "Date": "2022-10-22 14:36:34", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-nwu03/anat/sub-nwu03_space-other_T2w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-nwu03/anat/sub-nwu03_space-other_T2w_desc-softseg_label-SC_seg.json index 8eed774096..d441404268 100644 --- a/derivatives/labels_softseg_bin/sub-nwu03/anat/sub-nwu03_space-other_T2w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-nwu03/anat/sub-nwu03_space-other_T2w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:34" + "Date": "2022-10-22 14:36:34", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-nwu04/anat/sub-nwu04_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-nwu04/anat/sub-nwu04_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json index 8eed774096..f76d236e16 100644 --- a/derivatives/labels_softseg_bin/sub-nwu04/anat/sub-nwu04_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-nwu04/anat/sub-nwu04_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:34" + "Date": "2022-10-22 14:36:34", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-nwu04/anat/sub-nwu04_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-nwu04/anat/sub-nwu04_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json index 8eed774096..f76d236e16 100644 --- a/derivatives/labels_softseg_bin/sub-nwu04/anat/sub-nwu04_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-nwu04/anat/sub-nwu04_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:34" + "Date": "2022-10-22 14:36:34", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-nwu04/anat/sub-nwu04_space-other_T1w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-nwu04/anat/sub-nwu04_space-other_T1w_desc-softseg_label-SC_seg.json index 8eed774096..1c366c5294 100644 --- a/derivatives/labels_softseg_bin/sub-nwu04/anat/sub-nwu04_space-other_T1w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-nwu04/anat/sub-nwu04_space-other_T1w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:34" + "Date": "2022-10-22 14:36:34", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-nwu04/anat/sub-nwu04_space-other_T2star_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-nwu04/anat/sub-nwu04_space-other_T2star_desc-softseg_label-SC_seg.json index 8eed774096..731738220c 100644 --- a/derivatives/labels_softseg_bin/sub-nwu04/anat/sub-nwu04_space-other_T2star_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-nwu04/anat/sub-nwu04_space-other_T2star_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:34" + "Date": "2022-10-22 14:36:34", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-nwu04/anat/sub-nwu04_space-other_T2w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-nwu04/anat/sub-nwu04_space-other_T2w_desc-softseg_label-SC_seg.json index 8eed774096..d441404268 100644 --- a/derivatives/labels_softseg_bin/sub-nwu04/anat/sub-nwu04_space-other_T2w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-nwu04/anat/sub-nwu04_space-other_T2w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:34" + "Date": "2022-10-22 14:36:34", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-nwu05/anat/sub-nwu05_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-nwu05/anat/sub-nwu05_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json index 53cac6b3e5..f2f12e1281 100644 --- a/derivatives/labels_softseg_bin/sub-nwu05/anat/sub-nwu05_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-nwu05/anat/sub-nwu05_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:35" + "Date": "2022-10-22 14:36:35", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-nwu05/anat/sub-nwu05_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-nwu05/anat/sub-nwu05_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json index 53cac6b3e5..f2f12e1281 100644 --- a/derivatives/labels_softseg_bin/sub-nwu05/anat/sub-nwu05_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-nwu05/anat/sub-nwu05_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:35" + "Date": "2022-10-22 14:36:35", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-nwu05/anat/sub-nwu05_space-other_T1w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-nwu05/anat/sub-nwu05_space-other_T1w_desc-softseg_label-SC_seg.json index 53cac6b3e5..e42be99ed3 100644 --- a/derivatives/labels_softseg_bin/sub-nwu05/anat/sub-nwu05_space-other_T1w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-nwu05/anat/sub-nwu05_space-other_T1w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:35" + "Date": "2022-10-22 14:36:35", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-nwu05/anat/sub-nwu05_space-other_T2star_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-nwu05/anat/sub-nwu05_space-other_T2star_desc-softseg_label-SC_seg.json index 53cac6b3e5..2cf6386eab 100644 --- a/derivatives/labels_softseg_bin/sub-nwu05/anat/sub-nwu05_space-other_T2star_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-nwu05/anat/sub-nwu05_space-other_T2star_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:35" + "Date": "2022-10-22 14:36:35", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-nwu05/anat/sub-nwu05_space-other_T2w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-nwu05/anat/sub-nwu05_space-other_T2w_desc-softseg_label-SC_seg.json index 53cac6b3e5..310aebbd90 100644 --- a/derivatives/labels_softseg_bin/sub-nwu05/anat/sub-nwu05_space-other_T2w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-nwu05/anat/sub-nwu05_space-other_T2w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:35" + "Date": "2022-10-22 14:36:35", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-nwu06/anat/sub-nwu06_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-nwu06/anat/sub-nwu06_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json index 53cac6b3e5..f2f12e1281 100644 --- a/derivatives/labels_softseg_bin/sub-nwu06/anat/sub-nwu06_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-nwu06/anat/sub-nwu06_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:35" + "Date": "2022-10-22 14:36:35", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-nwu06/anat/sub-nwu06_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-nwu06/anat/sub-nwu06_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json index 53cac6b3e5..f2f12e1281 100644 --- a/derivatives/labels_softseg_bin/sub-nwu06/anat/sub-nwu06_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-nwu06/anat/sub-nwu06_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:35" + "Date": "2022-10-22 14:36:35", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-nwu06/anat/sub-nwu06_space-other_T1w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-nwu06/anat/sub-nwu06_space-other_T1w_desc-softseg_label-SC_seg.json index 53cac6b3e5..e42be99ed3 100644 --- a/derivatives/labels_softseg_bin/sub-nwu06/anat/sub-nwu06_space-other_T1w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-nwu06/anat/sub-nwu06_space-other_T1w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:35" + "Date": "2022-10-22 14:36:35", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-nwu06/anat/sub-nwu06_space-other_T2star_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-nwu06/anat/sub-nwu06_space-other_T2star_desc-softseg_label-SC_seg.json index 53cac6b3e5..2cf6386eab 100644 --- a/derivatives/labels_softseg_bin/sub-nwu06/anat/sub-nwu06_space-other_T2star_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-nwu06/anat/sub-nwu06_space-other_T2star_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:35" + "Date": "2022-10-22 14:36:35", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-nwu06/anat/sub-nwu06_space-other_T2w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-nwu06/anat/sub-nwu06_space-other_T2w_desc-softseg_label-SC_seg.json index 53cac6b3e5..310aebbd90 100644 --- a/derivatives/labels_softseg_bin/sub-nwu06/anat/sub-nwu06_space-other_T2w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-nwu06/anat/sub-nwu06_space-other_T2w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:35" + "Date": "2022-10-22 14:36:35", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-oxfordFmrib02/anat/sub-oxfordFmrib02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-oxfordFmrib02/anat/sub-oxfordFmrib02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json index 53cac6b3e5..f2f12e1281 100644 --- a/derivatives/labels_softseg_bin/sub-oxfordFmrib02/anat/sub-oxfordFmrib02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-oxfordFmrib02/anat/sub-oxfordFmrib02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:35" + "Date": "2022-10-22 14:36:35", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-oxfordFmrib02/anat/sub-oxfordFmrib02_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-oxfordFmrib02/anat/sub-oxfordFmrib02_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json index 53cac6b3e5..f2f12e1281 100644 --- a/derivatives/labels_softseg_bin/sub-oxfordFmrib02/anat/sub-oxfordFmrib02_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-oxfordFmrib02/anat/sub-oxfordFmrib02_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:35" + "Date": "2022-10-22 14:36:35", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-oxfordFmrib02/anat/sub-oxfordFmrib02_space-other_T1w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-oxfordFmrib02/anat/sub-oxfordFmrib02_space-other_T1w_desc-softseg_label-SC_seg.json index 53cac6b3e5..e42be99ed3 100644 --- a/derivatives/labels_softseg_bin/sub-oxfordFmrib02/anat/sub-oxfordFmrib02_space-other_T1w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-oxfordFmrib02/anat/sub-oxfordFmrib02_space-other_T1w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:35" + "Date": "2022-10-22 14:36:35", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-oxfordFmrib02/anat/sub-oxfordFmrib02_space-other_T2star_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-oxfordFmrib02/anat/sub-oxfordFmrib02_space-other_T2star_desc-softseg_label-SC_seg.json index 53cac6b3e5..2cf6386eab 100644 --- a/derivatives/labels_softseg_bin/sub-oxfordFmrib02/anat/sub-oxfordFmrib02_space-other_T2star_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-oxfordFmrib02/anat/sub-oxfordFmrib02_space-other_T2star_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:35" + "Date": "2022-10-22 14:36:35", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-oxfordFmrib02/anat/sub-oxfordFmrib02_space-other_T2w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-oxfordFmrib02/anat/sub-oxfordFmrib02_space-other_T2w_desc-softseg_label-SC_seg.json index 53cac6b3e5..310aebbd90 100644 --- a/derivatives/labels_softseg_bin/sub-oxfordFmrib02/anat/sub-oxfordFmrib02_space-other_T2w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-oxfordFmrib02/anat/sub-oxfordFmrib02_space-other_T2w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:35" + "Date": "2022-10-22 14:36:35", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-oxfordFmrib03/anat/sub-oxfordFmrib03_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-oxfordFmrib03/anat/sub-oxfordFmrib03_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json index 53cac6b3e5..f2f12e1281 100644 --- a/derivatives/labels_softseg_bin/sub-oxfordFmrib03/anat/sub-oxfordFmrib03_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-oxfordFmrib03/anat/sub-oxfordFmrib03_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:35" + "Date": "2022-10-22 14:36:35", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-oxfordFmrib03/anat/sub-oxfordFmrib03_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-oxfordFmrib03/anat/sub-oxfordFmrib03_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json index 53cac6b3e5..f2f12e1281 100644 --- a/derivatives/labels_softseg_bin/sub-oxfordFmrib03/anat/sub-oxfordFmrib03_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-oxfordFmrib03/anat/sub-oxfordFmrib03_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:35" + "Date": "2022-10-22 14:36:35", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-oxfordFmrib03/anat/sub-oxfordFmrib03_space-other_T1w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-oxfordFmrib03/anat/sub-oxfordFmrib03_space-other_T1w_desc-softseg_label-SC_seg.json index e36db71caa..d3f4731946 100644 --- a/derivatives/labels_softseg_bin/sub-oxfordFmrib03/anat/sub-oxfordFmrib03_space-other_T1w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-oxfordFmrib03/anat/sub-oxfordFmrib03_space-other_T1w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:36" + "Date": "2022-10-22 14:36:36", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-oxfordFmrib03/anat/sub-oxfordFmrib03_space-other_T2star_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-oxfordFmrib03/anat/sub-oxfordFmrib03_space-other_T2star_desc-softseg_label-SC_seg.json index e36db71caa..3f3a75aff2 100644 --- a/derivatives/labels_softseg_bin/sub-oxfordFmrib03/anat/sub-oxfordFmrib03_space-other_T2star_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-oxfordFmrib03/anat/sub-oxfordFmrib03_space-other_T2star_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:36" + "Date": "2022-10-22 14:36:36", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-oxfordFmrib03/anat/sub-oxfordFmrib03_space-other_T2w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-oxfordFmrib03/anat/sub-oxfordFmrib03_space-other_T2w_desc-softseg_label-SC_seg.json index e36db71caa..fd62b29b63 100644 --- a/derivatives/labels_softseg_bin/sub-oxfordFmrib03/anat/sub-oxfordFmrib03_space-other_T2w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-oxfordFmrib03/anat/sub-oxfordFmrib03_space-other_T2w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:36" + "Date": "2022-10-22 14:36:36", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-oxfordFmrib05/anat/sub-oxfordFmrib05_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-oxfordFmrib05/anat/sub-oxfordFmrib05_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json index e36db71caa..c868dbaa95 100644 --- a/derivatives/labels_softseg_bin/sub-oxfordFmrib05/anat/sub-oxfordFmrib05_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-oxfordFmrib05/anat/sub-oxfordFmrib05_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:36" + "Date": "2022-10-22 14:36:36", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-oxfordFmrib05/anat/sub-oxfordFmrib05_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-oxfordFmrib05/anat/sub-oxfordFmrib05_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json index e36db71caa..c868dbaa95 100644 --- a/derivatives/labels_softseg_bin/sub-oxfordFmrib05/anat/sub-oxfordFmrib05_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-oxfordFmrib05/anat/sub-oxfordFmrib05_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:36" + "Date": "2022-10-22 14:36:36", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-oxfordFmrib05/anat/sub-oxfordFmrib05_space-other_T1w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-oxfordFmrib05/anat/sub-oxfordFmrib05_space-other_T1w_desc-softseg_label-SC_seg.json index e36db71caa..d3f4731946 100644 --- a/derivatives/labels_softseg_bin/sub-oxfordFmrib05/anat/sub-oxfordFmrib05_space-other_T1w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-oxfordFmrib05/anat/sub-oxfordFmrib05_space-other_T1w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:36" + "Date": "2022-10-22 14:36:36", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-oxfordFmrib05/anat/sub-oxfordFmrib05_space-other_T2star_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-oxfordFmrib05/anat/sub-oxfordFmrib05_space-other_T2star_desc-softseg_label-SC_seg.json index e36db71caa..3f3a75aff2 100644 --- a/derivatives/labels_softseg_bin/sub-oxfordFmrib05/anat/sub-oxfordFmrib05_space-other_T2star_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-oxfordFmrib05/anat/sub-oxfordFmrib05_space-other_T2star_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:36" + "Date": "2022-10-22 14:36:36", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-oxfordFmrib05/anat/sub-oxfordFmrib05_space-other_T2w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-oxfordFmrib05/anat/sub-oxfordFmrib05_space-other_T2w_desc-softseg_label-SC_seg.json index e36db71caa..fd62b29b63 100644 --- a/derivatives/labels_softseg_bin/sub-oxfordFmrib05/anat/sub-oxfordFmrib05_space-other_T2w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-oxfordFmrib05/anat/sub-oxfordFmrib05_space-other_T2w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:36" + "Date": "2022-10-22 14:36:36", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-oxfordFmrib06/anat/sub-oxfordFmrib06_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-oxfordFmrib06/anat/sub-oxfordFmrib06_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json index e36db71caa..c868dbaa95 100644 --- a/derivatives/labels_softseg_bin/sub-oxfordFmrib06/anat/sub-oxfordFmrib06_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-oxfordFmrib06/anat/sub-oxfordFmrib06_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:36" + "Date": "2022-10-22 14:36:36", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-oxfordFmrib06/anat/sub-oxfordFmrib06_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-oxfordFmrib06/anat/sub-oxfordFmrib06_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json index e36db71caa..c868dbaa95 100644 --- a/derivatives/labels_softseg_bin/sub-oxfordFmrib06/anat/sub-oxfordFmrib06_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-oxfordFmrib06/anat/sub-oxfordFmrib06_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:36" + "Date": "2022-10-22 14:36:36", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-oxfordFmrib06/anat/sub-oxfordFmrib06_space-other_T1w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-oxfordFmrib06/anat/sub-oxfordFmrib06_space-other_T1w_desc-softseg_label-SC_seg.json index e36db71caa..d3f4731946 100644 --- a/derivatives/labels_softseg_bin/sub-oxfordFmrib06/anat/sub-oxfordFmrib06_space-other_T1w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-oxfordFmrib06/anat/sub-oxfordFmrib06_space-other_T1w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:36" + "Date": "2022-10-22 14:36:36", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-oxfordFmrib06/anat/sub-oxfordFmrib06_space-other_T2star_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-oxfordFmrib06/anat/sub-oxfordFmrib06_space-other_T2star_desc-softseg_label-SC_seg.json index e36db71caa..3f3a75aff2 100644 --- a/derivatives/labels_softseg_bin/sub-oxfordFmrib06/anat/sub-oxfordFmrib06_space-other_T2star_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-oxfordFmrib06/anat/sub-oxfordFmrib06_space-other_T2star_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:36" + "Date": "2022-10-22 14:36:36", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-oxfordFmrib06/anat/sub-oxfordFmrib06_space-other_T2w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-oxfordFmrib06/anat/sub-oxfordFmrib06_space-other_T2w_desc-softseg_label-SC_seg.json index e36db71caa..fd62b29b63 100644 --- a/derivatives/labels_softseg_bin/sub-oxfordFmrib06/anat/sub-oxfordFmrib06_space-other_T2w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-oxfordFmrib06/anat/sub-oxfordFmrib06_space-other_T2w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:36" + "Date": "2022-10-22 14:36:36", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-oxfordFmrib07/anat/sub-oxfordFmrib07_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-oxfordFmrib07/anat/sub-oxfordFmrib07_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json index e36db71caa..c868dbaa95 100644 --- a/derivatives/labels_softseg_bin/sub-oxfordFmrib07/anat/sub-oxfordFmrib07_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-oxfordFmrib07/anat/sub-oxfordFmrib07_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:36" + "Date": "2022-10-22 14:36:36", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-oxfordFmrib07/anat/sub-oxfordFmrib07_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-oxfordFmrib07/anat/sub-oxfordFmrib07_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json index e36db71caa..c868dbaa95 100644 --- a/derivatives/labels_softseg_bin/sub-oxfordFmrib07/anat/sub-oxfordFmrib07_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-oxfordFmrib07/anat/sub-oxfordFmrib07_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:36" + "Date": "2022-10-22 14:36:36", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-oxfordFmrib07/anat/sub-oxfordFmrib07_space-other_T1w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-oxfordFmrib07/anat/sub-oxfordFmrib07_space-other_T1w_desc-softseg_label-SC_seg.json index e36db71caa..d3f4731946 100644 --- a/derivatives/labels_softseg_bin/sub-oxfordFmrib07/anat/sub-oxfordFmrib07_space-other_T1w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-oxfordFmrib07/anat/sub-oxfordFmrib07_space-other_T1w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:36" + "Date": "2022-10-22 14:36:36", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-oxfordFmrib07/anat/sub-oxfordFmrib07_space-other_T2star_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-oxfordFmrib07/anat/sub-oxfordFmrib07_space-other_T2star_desc-softseg_label-SC_seg.json index e36db71caa..3f3a75aff2 100644 --- a/derivatives/labels_softseg_bin/sub-oxfordFmrib07/anat/sub-oxfordFmrib07_space-other_T2star_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-oxfordFmrib07/anat/sub-oxfordFmrib07_space-other_T2star_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:36" + "Date": "2022-10-22 14:36:36", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-oxfordFmrib07/anat/sub-oxfordFmrib07_space-other_T2w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-oxfordFmrib07/anat/sub-oxfordFmrib07_space-other_T2w_desc-softseg_label-SC_seg.json index e36db71caa..fd62b29b63 100644 --- a/derivatives/labels_softseg_bin/sub-oxfordFmrib07/anat/sub-oxfordFmrib07_space-other_T2w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-oxfordFmrib07/anat/sub-oxfordFmrib07_space-other_T2w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:36" + "Date": "2022-10-22 14:36:36", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-oxfordFmrib08/anat/sub-oxfordFmrib08_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-oxfordFmrib08/anat/sub-oxfordFmrib08_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json index e36db71caa..c868dbaa95 100644 --- a/derivatives/labels_softseg_bin/sub-oxfordFmrib08/anat/sub-oxfordFmrib08_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-oxfordFmrib08/anat/sub-oxfordFmrib08_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:36" + "Date": "2022-10-22 14:36:36", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-oxfordFmrib08/anat/sub-oxfordFmrib08_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-oxfordFmrib08/anat/sub-oxfordFmrib08_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json index a3e17bade0..6e4beb3946 100644 --- a/derivatives/labels_softseg_bin/sub-oxfordFmrib08/anat/sub-oxfordFmrib08_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-oxfordFmrib08/anat/sub-oxfordFmrib08_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:37" + "Date": "2022-10-22 14:36:37", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-oxfordFmrib08/anat/sub-oxfordFmrib08_space-other_T1w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-oxfordFmrib08/anat/sub-oxfordFmrib08_space-other_T1w_desc-softseg_label-SC_seg.json index a3e17bade0..64410d5987 100644 --- a/derivatives/labels_softseg_bin/sub-oxfordFmrib08/anat/sub-oxfordFmrib08_space-other_T1w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-oxfordFmrib08/anat/sub-oxfordFmrib08_space-other_T1w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:37" + "Date": "2022-10-22 14:36:37", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-oxfordFmrib08/anat/sub-oxfordFmrib08_space-other_T2star_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-oxfordFmrib08/anat/sub-oxfordFmrib08_space-other_T2star_desc-softseg_label-SC_seg.json index a3e17bade0..0dd7217acd 100644 --- a/derivatives/labels_softseg_bin/sub-oxfordFmrib08/anat/sub-oxfordFmrib08_space-other_T2star_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-oxfordFmrib08/anat/sub-oxfordFmrib08_space-other_T2star_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:37" + "Date": "2022-10-22 14:36:37", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-oxfordFmrib08/anat/sub-oxfordFmrib08_space-other_T2w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-oxfordFmrib08/anat/sub-oxfordFmrib08_space-other_T2w_desc-softseg_label-SC_seg.json index a3e17bade0..1bd35c6265 100644 --- a/derivatives/labels_softseg_bin/sub-oxfordFmrib08/anat/sub-oxfordFmrib08_space-other_T2w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-oxfordFmrib08/anat/sub-oxfordFmrib08_space-other_T2w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:37" + "Date": "2022-10-22 14:36:37", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-oxfordFmrib09/anat/sub-oxfordFmrib09_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-oxfordFmrib09/anat/sub-oxfordFmrib09_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json index a3e17bade0..6e4beb3946 100644 --- a/derivatives/labels_softseg_bin/sub-oxfordFmrib09/anat/sub-oxfordFmrib09_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-oxfordFmrib09/anat/sub-oxfordFmrib09_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:37" + "Date": "2022-10-22 14:36:37", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-oxfordFmrib09/anat/sub-oxfordFmrib09_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-oxfordFmrib09/anat/sub-oxfordFmrib09_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json index a3e17bade0..6e4beb3946 100644 --- a/derivatives/labels_softseg_bin/sub-oxfordFmrib09/anat/sub-oxfordFmrib09_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-oxfordFmrib09/anat/sub-oxfordFmrib09_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:37" + "Date": "2022-10-22 14:36:37", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-oxfordFmrib09/anat/sub-oxfordFmrib09_space-other_T1w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-oxfordFmrib09/anat/sub-oxfordFmrib09_space-other_T1w_desc-softseg_label-SC_seg.json index a3e17bade0..64410d5987 100644 --- a/derivatives/labels_softseg_bin/sub-oxfordFmrib09/anat/sub-oxfordFmrib09_space-other_T1w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-oxfordFmrib09/anat/sub-oxfordFmrib09_space-other_T1w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:37" + "Date": "2022-10-22 14:36:37", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-oxfordFmrib09/anat/sub-oxfordFmrib09_space-other_T2star_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-oxfordFmrib09/anat/sub-oxfordFmrib09_space-other_T2star_desc-softseg_label-SC_seg.json index a3e17bade0..0dd7217acd 100644 --- a/derivatives/labels_softseg_bin/sub-oxfordFmrib09/anat/sub-oxfordFmrib09_space-other_T2star_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-oxfordFmrib09/anat/sub-oxfordFmrib09_space-other_T2star_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:37" + "Date": "2022-10-22 14:36:37", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-oxfordFmrib09/anat/sub-oxfordFmrib09_space-other_T2w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-oxfordFmrib09/anat/sub-oxfordFmrib09_space-other_T2w_desc-softseg_label-SC_seg.json index a3e17bade0..1bd35c6265 100644 --- a/derivatives/labels_softseg_bin/sub-oxfordFmrib09/anat/sub-oxfordFmrib09_space-other_T2w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-oxfordFmrib09/anat/sub-oxfordFmrib09_space-other_T2w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:37" + "Date": "2022-10-22 14:36:37", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-oxfordFmrib10/anat/sub-oxfordFmrib10_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-oxfordFmrib10/anat/sub-oxfordFmrib10_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json index a3e17bade0..6e4beb3946 100644 --- a/derivatives/labels_softseg_bin/sub-oxfordFmrib10/anat/sub-oxfordFmrib10_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-oxfordFmrib10/anat/sub-oxfordFmrib10_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:37" + "Date": "2022-10-22 14:36:37", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-oxfordFmrib10/anat/sub-oxfordFmrib10_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-oxfordFmrib10/anat/sub-oxfordFmrib10_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json index a3e17bade0..6e4beb3946 100644 --- a/derivatives/labels_softseg_bin/sub-oxfordFmrib10/anat/sub-oxfordFmrib10_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-oxfordFmrib10/anat/sub-oxfordFmrib10_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:37" + "Date": "2022-10-22 14:36:37", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-oxfordFmrib10/anat/sub-oxfordFmrib10_space-other_T1w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-oxfordFmrib10/anat/sub-oxfordFmrib10_space-other_T1w_desc-softseg_label-SC_seg.json index a3e17bade0..64410d5987 100644 --- a/derivatives/labels_softseg_bin/sub-oxfordFmrib10/anat/sub-oxfordFmrib10_space-other_T1w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-oxfordFmrib10/anat/sub-oxfordFmrib10_space-other_T1w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:37" + "Date": "2022-10-22 14:36:37", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-oxfordFmrib10/anat/sub-oxfordFmrib10_space-other_T2star_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-oxfordFmrib10/anat/sub-oxfordFmrib10_space-other_T2star_desc-softseg_label-SC_seg.json index a3e17bade0..0dd7217acd 100644 --- a/derivatives/labels_softseg_bin/sub-oxfordFmrib10/anat/sub-oxfordFmrib10_space-other_T2star_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-oxfordFmrib10/anat/sub-oxfordFmrib10_space-other_T2star_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:37" + "Date": "2022-10-22 14:36:37", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-oxfordFmrib10/anat/sub-oxfordFmrib10_space-other_T2w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-oxfordFmrib10/anat/sub-oxfordFmrib10_space-other_T2w_desc-softseg_label-SC_seg.json index a3e17bade0..1bd35c6265 100644 --- a/derivatives/labels_softseg_bin/sub-oxfordFmrib10/anat/sub-oxfordFmrib10_space-other_T2w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-oxfordFmrib10/anat/sub-oxfordFmrib10_space-other_T2w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:37" + "Date": "2022-10-22 14:36:37", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-oxfordFmrib11/anat/sub-oxfordFmrib11_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-oxfordFmrib11/anat/sub-oxfordFmrib11_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json index a3e17bade0..6e4beb3946 100644 --- a/derivatives/labels_softseg_bin/sub-oxfordFmrib11/anat/sub-oxfordFmrib11_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-oxfordFmrib11/anat/sub-oxfordFmrib11_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:37" + "Date": "2022-10-22 14:36:37", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-oxfordFmrib11/anat/sub-oxfordFmrib11_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-oxfordFmrib11/anat/sub-oxfordFmrib11_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json index a3e17bade0..6e4beb3946 100644 --- a/derivatives/labels_softseg_bin/sub-oxfordFmrib11/anat/sub-oxfordFmrib11_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-oxfordFmrib11/anat/sub-oxfordFmrib11_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:37" + "Date": "2022-10-22 14:36:37", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-oxfordFmrib11/anat/sub-oxfordFmrib11_space-other_T1w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-oxfordFmrib11/anat/sub-oxfordFmrib11_space-other_T1w_desc-softseg_label-SC_seg.json index a3e17bade0..64410d5987 100644 --- a/derivatives/labels_softseg_bin/sub-oxfordFmrib11/anat/sub-oxfordFmrib11_space-other_T1w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-oxfordFmrib11/anat/sub-oxfordFmrib11_space-other_T1w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:37" + "Date": "2022-10-22 14:36:37", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-oxfordFmrib11/anat/sub-oxfordFmrib11_space-other_T2star_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-oxfordFmrib11/anat/sub-oxfordFmrib11_space-other_T2star_desc-softseg_label-SC_seg.json index a3e17bade0..0dd7217acd 100644 --- a/derivatives/labels_softseg_bin/sub-oxfordFmrib11/anat/sub-oxfordFmrib11_space-other_T2star_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-oxfordFmrib11/anat/sub-oxfordFmrib11_space-other_T2star_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:37" + "Date": "2022-10-22 14:36:37", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-oxfordFmrib11/anat/sub-oxfordFmrib11_space-other_T2w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-oxfordFmrib11/anat/sub-oxfordFmrib11_space-other_T2w_desc-softseg_label-SC_seg.json index a3e17bade0..1bd35c6265 100644 --- a/derivatives/labels_softseg_bin/sub-oxfordFmrib11/anat/sub-oxfordFmrib11_space-other_T2w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-oxfordFmrib11/anat/sub-oxfordFmrib11_space-other_T2w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:37" + "Date": "2022-10-22 14:36:37", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-oxfordOhba01/anat/sub-oxfordOhba01_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-oxfordOhba01/anat/sub-oxfordOhba01_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json index a3e17bade0..6e4beb3946 100644 --- a/derivatives/labels_softseg_bin/sub-oxfordOhba01/anat/sub-oxfordOhba01_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-oxfordOhba01/anat/sub-oxfordOhba01_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:37" + "Date": "2022-10-22 14:36:37", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-oxfordOhba01/anat/sub-oxfordOhba01_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-oxfordOhba01/anat/sub-oxfordOhba01_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json index a3e17bade0..6e4beb3946 100644 --- a/derivatives/labels_softseg_bin/sub-oxfordOhba01/anat/sub-oxfordOhba01_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-oxfordOhba01/anat/sub-oxfordOhba01_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:37" + "Date": "2022-10-22 14:36:37", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-oxfordOhba01/anat/sub-oxfordOhba01_space-other_T1w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-oxfordOhba01/anat/sub-oxfordOhba01_space-other_T1w_desc-softseg_label-SC_seg.json index 90c2d5f493..056e138a22 100644 --- a/derivatives/labels_softseg_bin/sub-oxfordOhba01/anat/sub-oxfordOhba01_space-other_T1w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-oxfordOhba01/anat/sub-oxfordOhba01_space-other_T1w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:38" + "Date": "2022-10-22 14:36:38", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-oxfordOhba01/anat/sub-oxfordOhba01_space-other_T2star_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-oxfordOhba01/anat/sub-oxfordOhba01_space-other_T2star_desc-softseg_label-SC_seg.json index 90c2d5f493..0d8e85563d 100644 --- a/derivatives/labels_softseg_bin/sub-oxfordOhba01/anat/sub-oxfordOhba01_space-other_T2star_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-oxfordOhba01/anat/sub-oxfordOhba01_space-other_T2star_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:38" + "Date": "2022-10-22 14:36:38", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-oxfordOhba01/anat/sub-oxfordOhba01_space-other_T2w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-oxfordOhba01/anat/sub-oxfordOhba01_space-other_T2w_desc-softseg_label-SC_seg.json index 90c2d5f493..41fd6be189 100644 --- a/derivatives/labels_softseg_bin/sub-oxfordOhba01/anat/sub-oxfordOhba01_space-other_T2w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-oxfordOhba01/anat/sub-oxfordOhba01_space-other_T2w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:38" + "Date": "2022-10-22 14:36:38", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-oxfordOhba03/anat/sub-oxfordOhba03_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-oxfordOhba03/anat/sub-oxfordOhba03_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json index 90c2d5f493..71f631e875 100644 --- a/derivatives/labels_softseg_bin/sub-oxfordOhba03/anat/sub-oxfordOhba03_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-oxfordOhba03/anat/sub-oxfordOhba03_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:38" + "Date": "2022-10-22 14:36:38", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-oxfordOhba03/anat/sub-oxfordOhba03_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-oxfordOhba03/anat/sub-oxfordOhba03_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json index 90c2d5f493..71f631e875 100644 --- a/derivatives/labels_softseg_bin/sub-oxfordOhba03/anat/sub-oxfordOhba03_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-oxfordOhba03/anat/sub-oxfordOhba03_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:38" + "Date": "2022-10-22 14:36:38", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-oxfordOhba03/anat/sub-oxfordOhba03_space-other_T1w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-oxfordOhba03/anat/sub-oxfordOhba03_space-other_T1w_desc-softseg_label-SC_seg.json index 90c2d5f493..056e138a22 100644 --- a/derivatives/labels_softseg_bin/sub-oxfordOhba03/anat/sub-oxfordOhba03_space-other_T1w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-oxfordOhba03/anat/sub-oxfordOhba03_space-other_T1w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:38" + "Date": "2022-10-22 14:36:38", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-oxfordOhba03/anat/sub-oxfordOhba03_space-other_T2star_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-oxfordOhba03/anat/sub-oxfordOhba03_space-other_T2star_desc-softseg_label-SC_seg.json index 90c2d5f493..0d8e85563d 100644 --- a/derivatives/labels_softseg_bin/sub-oxfordOhba03/anat/sub-oxfordOhba03_space-other_T2star_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-oxfordOhba03/anat/sub-oxfordOhba03_space-other_T2star_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:38" + "Date": "2022-10-22 14:36:38", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-oxfordOhba03/anat/sub-oxfordOhba03_space-other_T2w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-oxfordOhba03/anat/sub-oxfordOhba03_space-other_T2w_desc-softseg_label-SC_seg.json index 90c2d5f493..41fd6be189 100644 --- a/derivatives/labels_softseg_bin/sub-oxfordOhba03/anat/sub-oxfordOhba03_space-other_T2w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-oxfordOhba03/anat/sub-oxfordOhba03_space-other_T2w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:38" + "Date": "2022-10-22 14:36:38", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-oxfordOhba04/anat/sub-oxfordOhba04_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-oxfordOhba04/anat/sub-oxfordOhba04_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json index 90c2d5f493..71f631e875 100644 --- a/derivatives/labels_softseg_bin/sub-oxfordOhba04/anat/sub-oxfordOhba04_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-oxfordOhba04/anat/sub-oxfordOhba04_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:38" + "Date": "2022-10-22 14:36:38", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-oxfordOhba04/anat/sub-oxfordOhba04_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-oxfordOhba04/anat/sub-oxfordOhba04_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json index 90c2d5f493..71f631e875 100644 --- a/derivatives/labels_softseg_bin/sub-oxfordOhba04/anat/sub-oxfordOhba04_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-oxfordOhba04/anat/sub-oxfordOhba04_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:38" + "Date": "2022-10-22 14:36:38", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-oxfordOhba04/anat/sub-oxfordOhba04_space-other_T1w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-oxfordOhba04/anat/sub-oxfordOhba04_space-other_T1w_desc-softseg_label-SC_seg.json index 90c2d5f493..056e138a22 100644 --- a/derivatives/labels_softseg_bin/sub-oxfordOhba04/anat/sub-oxfordOhba04_space-other_T1w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-oxfordOhba04/anat/sub-oxfordOhba04_space-other_T1w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:38" + "Date": "2022-10-22 14:36:38", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-oxfordOhba04/anat/sub-oxfordOhba04_space-other_T2star_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-oxfordOhba04/anat/sub-oxfordOhba04_space-other_T2star_desc-softseg_label-SC_seg.json index 90c2d5f493..0d8e85563d 100644 --- a/derivatives/labels_softseg_bin/sub-oxfordOhba04/anat/sub-oxfordOhba04_space-other_T2star_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-oxfordOhba04/anat/sub-oxfordOhba04_space-other_T2star_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:38" + "Date": "2022-10-22 14:36:38", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-oxfordOhba04/anat/sub-oxfordOhba04_space-other_T2w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-oxfordOhba04/anat/sub-oxfordOhba04_space-other_T2w_desc-softseg_label-SC_seg.json index 90c2d5f493..41fd6be189 100644 --- a/derivatives/labels_softseg_bin/sub-oxfordOhba04/anat/sub-oxfordOhba04_space-other_T2w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-oxfordOhba04/anat/sub-oxfordOhba04_space-other_T2w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:38" + "Date": "2022-10-22 14:36:38", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-oxfordOhba05/anat/sub-oxfordOhba05_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-oxfordOhba05/anat/sub-oxfordOhba05_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json index 90c2d5f493..71f631e875 100644 --- a/derivatives/labels_softseg_bin/sub-oxfordOhba05/anat/sub-oxfordOhba05_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-oxfordOhba05/anat/sub-oxfordOhba05_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:38" + "Date": "2022-10-22 14:36:38", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-oxfordOhba05/anat/sub-oxfordOhba05_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-oxfordOhba05/anat/sub-oxfordOhba05_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json index 90c2d5f493..71f631e875 100644 --- a/derivatives/labels_softseg_bin/sub-oxfordOhba05/anat/sub-oxfordOhba05_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-oxfordOhba05/anat/sub-oxfordOhba05_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:38" + "Date": "2022-10-22 14:36:38", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-oxfordOhba05/anat/sub-oxfordOhba05_space-other_T1w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-oxfordOhba05/anat/sub-oxfordOhba05_space-other_T1w_desc-softseg_label-SC_seg.json index 90c2d5f493..056e138a22 100644 --- a/derivatives/labels_softseg_bin/sub-oxfordOhba05/anat/sub-oxfordOhba05_space-other_T1w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-oxfordOhba05/anat/sub-oxfordOhba05_space-other_T1w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:38" + "Date": "2022-10-22 14:36:38", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-oxfordOhba05/anat/sub-oxfordOhba05_space-other_T2star_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-oxfordOhba05/anat/sub-oxfordOhba05_space-other_T2star_desc-softseg_label-SC_seg.json index 90c2d5f493..0d8e85563d 100644 --- a/derivatives/labels_softseg_bin/sub-oxfordOhba05/anat/sub-oxfordOhba05_space-other_T2star_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-oxfordOhba05/anat/sub-oxfordOhba05_space-other_T2star_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:38" + "Date": "2022-10-22 14:36:38", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-oxfordOhba05/anat/sub-oxfordOhba05_space-other_T2w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-oxfordOhba05/anat/sub-oxfordOhba05_space-other_T2w_desc-softseg_label-SC_seg.json index 7b61e22a16..138fddb197 100644 --- a/derivatives/labels_softseg_bin/sub-oxfordOhba05/anat/sub-oxfordOhba05_space-other_T2w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-oxfordOhba05/anat/sub-oxfordOhba05_space-other_T2w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:39" + "Date": "2022-10-22 14:36:39", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-pavia01/anat/sub-pavia01_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-pavia01/anat/sub-pavia01_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json index 7b61e22a16..6a6ceaec99 100644 --- a/derivatives/labels_softseg_bin/sub-pavia01/anat/sub-pavia01_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-pavia01/anat/sub-pavia01_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:39" + "Date": "2022-10-22 14:36:39", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-pavia01/anat/sub-pavia01_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-pavia01/anat/sub-pavia01_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json index 7b61e22a16..6a6ceaec99 100644 --- a/derivatives/labels_softseg_bin/sub-pavia01/anat/sub-pavia01_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-pavia01/anat/sub-pavia01_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:39" + "Date": "2022-10-22 14:36:39", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-pavia01/anat/sub-pavia01_space-other_T1w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-pavia01/anat/sub-pavia01_space-other_T1w_desc-softseg_label-SC_seg.json index 7b61e22a16..c99cf22522 100644 --- a/derivatives/labels_softseg_bin/sub-pavia01/anat/sub-pavia01_space-other_T1w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-pavia01/anat/sub-pavia01_space-other_T1w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:39" + "Date": "2022-10-22 14:36:39", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-pavia01/anat/sub-pavia01_space-other_T2star_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-pavia01/anat/sub-pavia01_space-other_T2star_desc-softseg_label-SC_seg.json index 7b61e22a16..0f33145de1 100644 --- a/derivatives/labels_softseg_bin/sub-pavia01/anat/sub-pavia01_space-other_T2star_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-pavia01/anat/sub-pavia01_space-other_T2star_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:39" + "Date": "2022-10-22 14:36:39", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-pavia01/anat/sub-pavia01_space-other_T2w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-pavia01/anat/sub-pavia01_space-other_T2w_desc-softseg_label-SC_seg.json index 7b61e22a16..138fddb197 100644 --- a/derivatives/labels_softseg_bin/sub-pavia01/anat/sub-pavia01_space-other_T2w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-pavia01/anat/sub-pavia01_space-other_T2w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:39" + "Date": "2022-10-22 14:36:39", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-pavia02/anat/sub-pavia02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-pavia02/anat/sub-pavia02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json index 7b61e22a16..6a6ceaec99 100644 --- a/derivatives/labels_softseg_bin/sub-pavia02/anat/sub-pavia02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-pavia02/anat/sub-pavia02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:39" + "Date": "2022-10-22 14:36:39", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-pavia02/anat/sub-pavia02_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-pavia02/anat/sub-pavia02_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json index 7b61e22a16..6a6ceaec99 100644 --- a/derivatives/labels_softseg_bin/sub-pavia02/anat/sub-pavia02_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-pavia02/anat/sub-pavia02_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:39" + "Date": "2022-10-22 14:36:39", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-pavia02/anat/sub-pavia02_space-other_T1w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-pavia02/anat/sub-pavia02_space-other_T1w_desc-softseg_label-SC_seg.json index 7b61e22a16..c99cf22522 100644 --- a/derivatives/labels_softseg_bin/sub-pavia02/anat/sub-pavia02_space-other_T1w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-pavia02/anat/sub-pavia02_space-other_T1w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:39" + "Date": "2022-10-22 14:36:39", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-pavia02/anat/sub-pavia02_space-other_T2star_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-pavia02/anat/sub-pavia02_space-other_T2star_desc-softseg_label-SC_seg.json index 7b61e22a16..0f33145de1 100644 --- a/derivatives/labels_softseg_bin/sub-pavia02/anat/sub-pavia02_space-other_T2star_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-pavia02/anat/sub-pavia02_space-other_T2star_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:39" + "Date": "2022-10-22 14:36:39", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-pavia02/anat/sub-pavia02_space-other_T2w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-pavia02/anat/sub-pavia02_space-other_T2w_desc-softseg_label-SC_seg.json index 7b61e22a16..138fddb197 100644 --- a/derivatives/labels_softseg_bin/sub-pavia02/anat/sub-pavia02_space-other_T2w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-pavia02/anat/sub-pavia02_space-other_T2w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:39" + "Date": "2022-10-22 14:36:39", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-pavia03/anat/sub-pavia03_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-pavia03/anat/sub-pavia03_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json index 7b61e22a16..6a6ceaec99 100644 --- a/derivatives/labels_softseg_bin/sub-pavia03/anat/sub-pavia03_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-pavia03/anat/sub-pavia03_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:39" + "Date": "2022-10-22 14:36:39", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-pavia03/anat/sub-pavia03_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-pavia03/anat/sub-pavia03_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json index 7b61e22a16..6a6ceaec99 100644 --- a/derivatives/labels_softseg_bin/sub-pavia03/anat/sub-pavia03_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-pavia03/anat/sub-pavia03_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:39" + "Date": "2022-10-22 14:36:39", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-pavia03/anat/sub-pavia03_space-other_T1w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-pavia03/anat/sub-pavia03_space-other_T1w_desc-softseg_label-SC_seg.json index 7b61e22a16..c99cf22522 100644 --- a/derivatives/labels_softseg_bin/sub-pavia03/anat/sub-pavia03_space-other_T1w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-pavia03/anat/sub-pavia03_space-other_T1w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:39" + "Date": "2022-10-22 14:36:39", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-pavia03/anat/sub-pavia03_space-other_T2star_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-pavia03/anat/sub-pavia03_space-other_T2star_desc-softseg_label-SC_seg.json index 7b61e22a16..0f33145de1 100644 --- a/derivatives/labels_softseg_bin/sub-pavia03/anat/sub-pavia03_space-other_T2star_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-pavia03/anat/sub-pavia03_space-other_T2star_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:39" + "Date": "2022-10-22 14:36:39", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-pavia03/anat/sub-pavia03_space-other_T2w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-pavia03/anat/sub-pavia03_space-other_T2w_desc-softseg_label-SC_seg.json index 7b61e22a16..138fddb197 100644 --- a/derivatives/labels_softseg_bin/sub-pavia03/anat/sub-pavia03_space-other_T2w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-pavia03/anat/sub-pavia03_space-other_T2w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:39" + "Date": "2022-10-22 14:36:39", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-pavia04/anat/sub-pavia04_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-pavia04/anat/sub-pavia04_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json index 7b61e22a16..6a6ceaec99 100644 --- a/derivatives/labels_softseg_bin/sub-pavia04/anat/sub-pavia04_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-pavia04/anat/sub-pavia04_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:39" + "Date": "2022-10-22 14:36:39", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-pavia04/anat/sub-pavia04_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-pavia04/anat/sub-pavia04_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json index 7b61e22a16..6a6ceaec99 100644 --- a/derivatives/labels_softseg_bin/sub-pavia04/anat/sub-pavia04_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-pavia04/anat/sub-pavia04_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:39" + "Date": "2022-10-22 14:36:39", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-pavia04/anat/sub-pavia04_space-other_T1w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-pavia04/anat/sub-pavia04_space-other_T1w_desc-softseg_label-SC_seg.json index 7b61e22a16..c99cf22522 100644 --- a/derivatives/labels_softseg_bin/sub-pavia04/anat/sub-pavia04_space-other_T1w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-pavia04/anat/sub-pavia04_space-other_T1w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:39" + "Date": "2022-10-22 14:36:39", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-pavia04/anat/sub-pavia04_space-other_T2star_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-pavia04/anat/sub-pavia04_space-other_T2star_desc-softseg_label-SC_seg.json index 7b61e22a16..0f33145de1 100644 --- a/derivatives/labels_softseg_bin/sub-pavia04/anat/sub-pavia04_space-other_T2star_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-pavia04/anat/sub-pavia04_space-other_T2star_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:39" + "Date": "2022-10-22 14:36:39", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-pavia04/anat/sub-pavia04_space-other_T2w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-pavia04/anat/sub-pavia04_space-other_T2w_desc-softseg_label-SC_seg.json index 7b61e22a16..138fddb197 100644 --- a/derivatives/labels_softseg_bin/sub-pavia04/anat/sub-pavia04_space-other_T2w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-pavia04/anat/sub-pavia04_space-other_T2w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:39" + "Date": "2022-10-22 14:36:39", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-pavia05/anat/sub-pavia05_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-pavia05/anat/sub-pavia05_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json index 7b61e22a16..6a6ceaec99 100644 --- a/derivatives/labels_softseg_bin/sub-pavia05/anat/sub-pavia05_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-pavia05/anat/sub-pavia05_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:39" + "Date": "2022-10-22 14:36:39", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-pavia05/anat/sub-pavia05_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-pavia05/anat/sub-pavia05_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json index 7b61e22a16..6a6ceaec99 100644 --- a/derivatives/labels_softseg_bin/sub-pavia05/anat/sub-pavia05_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-pavia05/anat/sub-pavia05_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:39" + "Date": "2022-10-22 14:36:39", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-pavia05/anat/sub-pavia05_space-other_T1w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-pavia05/anat/sub-pavia05_space-other_T1w_desc-softseg_label-SC_seg.json index 7b61e22a16..c99cf22522 100644 --- a/derivatives/labels_softseg_bin/sub-pavia05/anat/sub-pavia05_space-other_T1w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-pavia05/anat/sub-pavia05_space-other_T1w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:39" + "Date": "2022-10-22 14:36:39", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-pavia05/anat/sub-pavia05_space-other_T2star_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-pavia05/anat/sub-pavia05_space-other_T2star_desc-softseg_label-SC_seg.json index 3286ad506a..b0ac9bdb02 100644 --- a/derivatives/labels_softseg_bin/sub-pavia05/anat/sub-pavia05_space-other_T2star_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-pavia05/anat/sub-pavia05_space-other_T2star_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:40" + "Date": "2022-10-22 14:36:40", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-pavia05/anat/sub-pavia05_space-other_T2w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-pavia05/anat/sub-pavia05_space-other_T2w_desc-softseg_label-SC_seg.json index 3286ad506a..9d19030d9a 100644 --- a/derivatives/labels_softseg_bin/sub-pavia05/anat/sub-pavia05_space-other_T2w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-pavia05/anat/sub-pavia05_space-other_T2w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:40" + "Date": "2022-10-22 14:36:40", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-pavia06/anat/sub-pavia06_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-pavia06/anat/sub-pavia06_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json index 3286ad506a..040fde22da 100644 --- a/derivatives/labels_softseg_bin/sub-pavia06/anat/sub-pavia06_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-pavia06/anat/sub-pavia06_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:40" + "Date": "2022-10-22 14:36:40", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-pavia06/anat/sub-pavia06_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-pavia06/anat/sub-pavia06_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json index 3286ad506a..040fde22da 100644 --- a/derivatives/labels_softseg_bin/sub-pavia06/anat/sub-pavia06_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-pavia06/anat/sub-pavia06_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:40" + "Date": "2022-10-22 14:36:40", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-pavia06/anat/sub-pavia06_space-other_T1w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-pavia06/anat/sub-pavia06_space-other_T1w_desc-softseg_label-SC_seg.json index 3286ad506a..353b59af03 100644 --- a/derivatives/labels_softseg_bin/sub-pavia06/anat/sub-pavia06_space-other_T1w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-pavia06/anat/sub-pavia06_space-other_T1w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:40" + "Date": "2022-10-22 14:36:40", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-pavia06/anat/sub-pavia06_space-other_T2star_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-pavia06/anat/sub-pavia06_space-other_T2star_desc-softseg_label-SC_seg.json index 3286ad506a..b0ac9bdb02 100644 --- a/derivatives/labels_softseg_bin/sub-pavia06/anat/sub-pavia06_space-other_T2star_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-pavia06/anat/sub-pavia06_space-other_T2star_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:40" + "Date": "2022-10-22 14:36:40", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-pavia06/anat/sub-pavia06_space-other_T2w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-pavia06/anat/sub-pavia06_space-other_T2w_desc-softseg_label-SC_seg.json index 3286ad506a..9d19030d9a 100644 --- a/derivatives/labels_softseg_bin/sub-pavia06/anat/sub-pavia06_space-other_T2w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-pavia06/anat/sub-pavia06_space-other_T2w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:40" + "Date": "2022-10-22 14:36:40", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-perform01/anat/sub-perform01_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-perform01/anat/sub-perform01_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json index 3286ad506a..040fde22da 100644 --- a/derivatives/labels_softseg_bin/sub-perform01/anat/sub-perform01_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-perform01/anat/sub-perform01_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:40" + "Date": "2022-10-22 14:36:40", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-perform01/anat/sub-perform01_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-perform01/anat/sub-perform01_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json index 3286ad506a..040fde22da 100644 --- a/derivatives/labels_softseg_bin/sub-perform01/anat/sub-perform01_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-perform01/anat/sub-perform01_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:40" + "Date": "2022-10-22 14:36:40", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-perform01/anat/sub-perform01_space-other_T1w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-perform01/anat/sub-perform01_space-other_T1w_desc-softseg_label-SC_seg.json index 3286ad506a..353b59af03 100644 --- a/derivatives/labels_softseg_bin/sub-perform01/anat/sub-perform01_space-other_T1w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-perform01/anat/sub-perform01_space-other_T1w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:40" + "Date": "2022-10-22 14:36:40", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-perform01/anat/sub-perform01_space-other_T2star_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-perform01/anat/sub-perform01_space-other_T2star_desc-softseg_label-SC_seg.json index 3286ad506a..b0ac9bdb02 100644 --- a/derivatives/labels_softseg_bin/sub-perform01/anat/sub-perform01_space-other_T2star_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-perform01/anat/sub-perform01_space-other_T2star_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:40" + "Date": "2022-10-22 14:36:40", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-perform01/anat/sub-perform01_space-other_T2w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-perform01/anat/sub-perform01_space-other_T2w_desc-softseg_label-SC_seg.json index 3286ad506a..9d19030d9a 100644 --- a/derivatives/labels_softseg_bin/sub-perform01/anat/sub-perform01_space-other_T2w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-perform01/anat/sub-perform01_space-other_T2w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:40" + "Date": "2022-10-22 14:36:40", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-perform02/anat/sub-perform02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-perform02/anat/sub-perform02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json index 3286ad506a..040fde22da 100644 --- a/derivatives/labels_softseg_bin/sub-perform02/anat/sub-perform02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-perform02/anat/sub-perform02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:40" + "Date": "2022-10-22 14:36:40", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-perform02/anat/sub-perform02_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-perform02/anat/sub-perform02_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json index 3286ad506a..040fde22da 100644 --- a/derivatives/labels_softseg_bin/sub-perform02/anat/sub-perform02_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-perform02/anat/sub-perform02_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:40" + "Date": "2022-10-22 14:36:40", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-perform02/anat/sub-perform02_space-other_T1w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-perform02/anat/sub-perform02_space-other_T1w_desc-softseg_label-SC_seg.json index 3286ad506a..353b59af03 100644 --- a/derivatives/labels_softseg_bin/sub-perform02/anat/sub-perform02_space-other_T1w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-perform02/anat/sub-perform02_space-other_T1w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:40" + "Date": "2022-10-22 14:36:40", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-perform02/anat/sub-perform02_space-other_T2star_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-perform02/anat/sub-perform02_space-other_T2star_desc-softseg_label-SC_seg.json index 3286ad506a..b0ac9bdb02 100644 --- a/derivatives/labels_softseg_bin/sub-perform02/anat/sub-perform02_space-other_T2star_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-perform02/anat/sub-perform02_space-other_T2star_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:40" + "Date": "2022-10-22 14:36:40", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-perform02/anat/sub-perform02_space-other_T2w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-perform02/anat/sub-perform02_space-other_T2w_desc-softseg_label-SC_seg.json index 3286ad506a..9d19030d9a 100644 --- a/derivatives/labels_softseg_bin/sub-perform02/anat/sub-perform02_space-other_T2w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-perform02/anat/sub-perform02_space-other_T2w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:40" + "Date": "2022-10-22 14:36:40", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-perform03/anat/sub-perform03_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-perform03/anat/sub-perform03_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json index 3286ad506a..040fde22da 100644 --- a/derivatives/labels_softseg_bin/sub-perform03/anat/sub-perform03_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-perform03/anat/sub-perform03_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:40" + "Date": "2022-10-22 14:36:40", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-perform03/anat/sub-perform03_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-perform03/anat/sub-perform03_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json index 3286ad506a..040fde22da 100644 --- a/derivatives/labels_softseg_bin/sub-perform03/anat/sub-perform03_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-perform03/anat/sub-perform03_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:40" + "Date": "2022-10-22 14:36:40", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-perform03/anat/sub-perform03_space-other_T1w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-perform03/anat/sub-perform03_space-other_T1w_desc-softseg_label-SC_seg.json index 8f25190093..2a52540949 100644 --- a/derivatives/labels_softseg_bin/sub-perform03/anat/sub-perform03_space-other_T1w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-perform03/anat/sub-perform03_space-other_T1w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:41" + "Date": "2022-10-22 14:36:41", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-perform03/anat/sub-perform03_space-other_T2star_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-perform03/anat/sub-perform03_space-other_T2star_desc-softseg_label-SC_seg.json index 8f25190093..4f7b133852 100644 --- a/derivatives/labels_softseg_bin/sub-perform03/anat/sub-perform03_space-other_T2star_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-perform03/anat/sub-perform03_space-other_T2star_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:41" + "Date": "2022-10-22 14:36:41", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-perform03/anat/sub-perform03_space-other_T2w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-perform03/anat/sub-perform03_space-other_T2w_desc-softseg_label-SC_seg.json index 8f25190093..c43f9308fa 100644 --- a/derivatives/labels_softseg_bin/sub-perform03/anat/sub-perform03_space-other_T2w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-perform03/anat/sub-perform03_space-other_T2w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:41" + "Date": "2022-10-22 14:36:41", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-perform04/anat/sub-perform04_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-perform04/anat/sub-perform04_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json index 8f25190093..b533e4d3fe 100644 --- a/derivatives/labels_softseg_bin/sub-perform04/anat/sub-perform04_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-perform04/anat/sub-perform04_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:41" + "Date": "2022-10-22 14:36:41", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-perform04/anat/sub-perform04_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-perform04/anat/sub-perform04_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json index 8f25190093..b533e4d3fe 100644 --- a/derivatives/labels_softseg_bin/sub-perform04/anat/sub-perform04_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-perform04/anat/sub-perform04_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:41" + "Date": "2022-10-22 14:36:41", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-perform04/anat/sub-perform04_space-other_T1w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-perform04/anat/sub-perform04_space-other_T1w_desc-softseg_label-SC_seg.json index 8f25190093..2a52540949 100644 --- a/derivatives/labels_softseg_bin/sub-perform04/anat/sub-perform04_space-other_T1w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-perform04/anat/sub-perform04_space-other_T1w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:41" + "Date": "2022-10-22 14:36:41", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-perform04/anat/sub-perform04_space-other_T2star_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-perform04/anat/sub-perform04_space-other_T2star_desc-softseg_label-SC_seg.json index 8f25190093..4f7b133852 100644 --- a/derivatives/labels_softseg_bin/sub-perform04/anat/sub-perform04_space-other_T2star_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-perform04/anat/sub-perform04_space-other_T2star_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:41" + "Date": "2022-10-22 14:36:41", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-perform04/anat/sub-perform04_space-other_T2w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-perform04/anat/sub-perform04_space-other_T2w_desc-softseg_label-SC_seg.json index 8f25190093..c43f9308fa 100644 --- a/derivatives/labels_softseg_bin/sub-perform04/anat/sub-perform04_space-other_T2w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-perform04/anat/sub-perform04_space-other_T2w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:41" + "Date": "2022-10-22 14:36:41", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-perform05/anat/sub-perform05_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-perform05/anat/sub-perform05_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json index 8f25190093..b533e4d3fe 100644 --- a/derivatives/labels_softseg_bin/sub-perform05/anat/sub-perform05_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-perform05/anat/sub-perform05_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:41" + "Date": "2022-10-22 14:36:41", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-perform05/anat/sub-perform05_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-perform05/anat/sub-perform05_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json index 8f25190093..b533e4d3fe 100644 --- a/derivatives/labels_softseg_bin/sub-perform05/anat/sub-perform05_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-perform05/anat/sub-perform05_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:41" + "Date": "2022-10-22 14:36:41", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-perform05/anat/sub-perform05_space-other_T1w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-perform05/anat/sub-perform05_space-other_T1w_desc-softseg_label-SC_seg.json index 8f25190093..2a52540949 100644 --- a/derivatives/labels_softseg_bin/sub-perform05/anat/sub-perform05_space-other_T1w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-perform05/anat/sub-perform05_space-other_T1w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:41" + "Date": "2022-10-22 14:36:41", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-perform05/anat/sub-perform05_space-other_T2star_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-perform05/anat/sub-perform05_space-other_T2star_desc-softseg_label-SC_seg.json index 8f25190093..4f7b133852 100644 --- a/derivatives/labels_softseg_bin/sub-perform05/anat/sub-perform05_space-other_T2star_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-perform05/anat/sub-perform05_space-other_T2star_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:41" + "Date": "2022-10-22 14:36:41", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-perform05/anat/sub-perform05_space-other_T2w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-perform05/anat/sub-perform05_space-other_T2w_desc-softseg_label-SC_seg.json index 8f25190093..c43f9308fa 100644 --- a/derivatives/labels_softseg_bin/sub-perform05/anat/sub-perform05_space-other_T2w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-perform05/anat/sub-perform05_space-other_T2w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:41" + "Date": "2022-10-22 14:36:41", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-perform06/anat/sub-perform06_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-perform06/anat/sub-perform06_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json index 8f25190093..b533e4d3fe 100644 --- a/derivatives/labels_softseg_bin/sub-perform06/anat/sub-perform06_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-perform06/anat/sub-perform06_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:41" + "Date": "2022-10-22 14:36:41", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-perform06/anat/sub-perform06_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-perform06/anat/sub-perform06_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json index 8f25190093..b533e4d3fe 100644 --- a/derivatives/labels_softseg_bin/sub-perform06/anat/sub-perform06_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-perform06/anat/sub-perform06_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:41" + "Date": "2022-10-22 14:36:41", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-perform06/anat/sub-perform06_space-other_T1w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-perform06/anat/sub-perform06_space-other_T1w_desc-softseg_label-SC_seg.json index 8f25190093..2a52540949 100644 --- a/derivatives/labels_softseg_bin/sub-perform06/anat/sub-perform06_space-other_T1w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-perform06/anat/sub-perform06_space-other_T1w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:41" + "Date": "2022-10-22 14:36:41", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-perform06/anat/sub-perform06_space-other_T2star_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-perform06/anat/sub-perform06_space-other_T2star_desc-softseg_label-SC_seg.json index 8f25190093..4f7b133852 100644 --- a/derivatives/labels_softseg_bin/sub-perform06/anat/sub-perform06_space-other_T2star_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-perform06/anat/sub-perform06_space-other_T2star_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:41" + "Date": "2022-10-22 14:36:41", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-perform06/anat/sub-perform06_space-other_T2w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-perform06/anat/sub-perform06_space-other_T2w_desc-softseg_label-SC_seg.json index 8f25190093..c43f9308fa 100644 --- a/derivatives/labels_softseg_bin/sub-perform06/anat/sub-perform06_space-other_T2w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-perform06/anat/sub-perform06_space-other_T2w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:41" + "Date": "2022-10-22 14:36:41", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-queensland01/anat/sub-queensland01_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-queensland01/anat/sub-queensland01_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json index 8f25190093..b533e4d3fe 100644 --- a/derivatives/labels_softseg_bin/sub-queensland01/anat/sub-queensland01_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-queensland01/anat/sub-queensland01_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:41" + "Date": "2022-10-22 14:36:41", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-queensland01/anat/sub-queensland01_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-queensland01/anat/sub-queensland01_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json index 8f25190093..b533e4d3fe 100644 --- a/derivatives/labels_softseg_bin/sub-queensland01/anat/sub-queensland01_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-queensland01/anat/sub-queensland01_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:41" + "Date": "2022-10-22 14:36:41", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-queensland01/anat/sub-queensland01_space-other_T1w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-queensland01/anat/sub-queensland01_space-other_T1w_desc-softseg_label-SC_seg.json index e1b68a2928..19d7af388d 100644 --- a/derivatives/labels_softseg_bin/sub-queensland01/anat/sub-queensland01_space-other_T1w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-queensland01/anat/sub-queensland01_space-other_T1w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:42" + "Date": "2022-10-22 14:36:42", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-queensland01/anat/sub-queensland01_space-other_T2star_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-queensland01/anat/sub-queensland01_space-other_T2star_desc-softseg_label-SC_seg.json index e1b68a2928..bf50030012 100644 --- a/derivatives/labels_softseg_bin/sub-queensland01/anat/sub-queensland01_space-other_T2star_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-queensland01/anat/sub-queensland01_space-other_T2star_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:42" + "Date": "2022-10-22 14:36:42", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-queensland01/anat/sub-queensland01_space-other_T2w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-queensland01/anat/sub-queensland01_space-other_T2w_desc-softseg_label-SC_seg.json index e1b68a2928..4bbb66a72b 100644 --- a/derivatives/labels_softseg_bin/sub-queensland01/anat/sub-queensland01_space-other_T2w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-queensland01/anat/sub-queensland01_space-other_T2w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:42" + "Date": "2022-10-22 14:36:42", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-queensland02/anat/sub-queensland02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-queensland02/anat/sub-queensland02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json index e1b68a2928..db93662c6e 100644 --- a/derivatives/labels_softseg_bin/sub-queensland02/anat/sub-queensland02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-queensland02/anat/sub-queensland02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:42" + "Date": "2022-10-22 14:36:42", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-queensland02/anat/sub-queensland02_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-queensland02/anat/sub-queensland02_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json index e1b68a2928..db93662c6e 100644 --- a/derivatives/labels_softseg_bin/sub-queensland02/anat/sub-queensland02_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-queensland02/anat/sub-queensland02_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:42" + "Date": "2022-10-22 14:36:42", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-queensland02/anat/sub-queensland02_space-other_T1w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-queensland02/anat/sub-queensland02_space-other_T1w_desc-softseg_label-SC_seg.json index e1b68a2928..19d7af388d 100644 --- a/derivatives/labels_softseg_bin/sub-queensland02/anat/sub-queensland02_space-other_T1w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-queensland02/anat/sub-queensland02_space-other_T1w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:42" + "Date": "2022-10-22 14:36:42", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-queensland02/anat/sub-queensland02_space-other_T2star_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-queensland02/anat/sub-queensland02_space-other_T2star_desc-softseg_label-SC_seg.json index e1b68a2928..bf50030012 100644 --- a/derivatives/labels_softseg_bin/sub-queensland02/anat/sub-queensland02_space-other_T2star_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-queensland02/anat/sub-queensland02_space-other_T2star_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:42" + "Date": "2022-10-22 14:36:42", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-queensland02/anat/sub-queensland02_space-other_T2w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-queensland02/anat/sub-queensland02_space-other_T2w_desc-softseg_label-SC_seg.json index e1b68a2928..4bbb66a72b 100644 --- a/derivatives/labels_softseg_bin/sub-queensland02/anat/sub-queensland02_space-other_T2w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-queensland02/anat/sub-queensland02_space-other_T2w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:42" + "Date": "2022-10-22 14:36:42", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-queensland03/anat/sub-queensland03_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-queensland03/anat/sub-queensland03_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json index e1b68a2928..db93662c6e 100644 --- a/derivatives/labels_softseg_bin/sub-queensland03/anat/sub-queensland03_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-queensland03/anat/sub-queensland03_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:42" + "Date": "2022-10-22 14:36:42", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-queensland03/anat/sub-queensland03_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-queensland03/anat/sub-queensland03_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json index e1b68a2928..db93662c6e 100644 --- a/derivatives/labels_softseg_bin/sub-queensland03/anat/sub-queensland03_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-queensland03/anat/sub-queensland03_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:42" + "Date": "2022-10-22 14:36:42", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-queensland03/anat/sub-queensland03_space-other_T1w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-queensland03/anat/sub-queensland03_space-other_T1w_desc-softseg_label-SC_seg.json index e1b68a2928..19d7af388d 100644 --- a/derivatives/labels_softseg_bin/sub-queensland03/anat/sub-queensland03_space-other_T1w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-queensland03/anat/sub-queensland03_space-other_T1w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:42" + "Date": "2022-10-22 14:36:42", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-queensland03/anat/sub-queensland03_space-other_T2star_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-queensland03/anat/sub-queensland03_space-other_T2star_desc-softseg_label-SC_seg.json index e1b68a2928..bf50030012 100644 --- a/derivatives/labels_softseg_bin/sub-queensland03/anat/sub-queensland03_space-other_T2star_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-queensland03/anat/sub-queensland03_space-other_T2star_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:42" + "Date": "2022-10-22 14:36:42", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-queensland03/anat/sub-queensland03_space-other_T2w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-queensland03/anat/sub-queensland03_space-other_T2w_desc-softseg_label-SC_seg.json index e1b68a2928..4bbb66a72b 100644 --- a/derivatives/labels_softseg_bin/sub-queensland03/anat/sub-queensland03_space-other_T2w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-queensland03/anat/sub-queensland03_space-other_T2w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:42" + "Date": "2022-10-22 14:36:42", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-queensland04/anat/sub-queensland04_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-queensland04/anat/sub-queensland04_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json index e1b68a2928..db93662c6e 100644 --- a/derivatives/labels_softseg_bin/sub-queensland04/anat/sub-queensland04_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-queensland04/anat/sub-queensland04_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:42" + "Date": "2022-10-22 14:36:42", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-queensland04/anat/sub-queensland04_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-queensland04/anat/sub-queensland04_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json index e1b68a2928..db93662c6e 100644 --- a/derivatives/labels_softseg_bin/sub-queensland04/anat/sub-queensland04_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-queensland04/anat/sub-queensland04_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:42" + "Date": "2022-10-22 14:36:42", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-queensland04/anat/sub-queensland04_space-other_T1w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-queensland04/anat/sub-queensland04_space-other_T1w_desc-softseg_label-SC_seg.json index e1b68a2928..19d7af388d 100644 --- a/derivatives/labels_softseg_bin/sub-queensland04/anat/sub-queensland04_space-other_T1w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-queensland04/anat/sub-queensland04_space-other_T1w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:42" + "Date": "2022-10-22 14:36:42", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-queensland04/anat/sub-queensland04_space-other_T2star_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-queensland04/anat/sub-queensland04_space-other_T2star_desc-softseg_label-SC_seg.json index e1b68a2928..bf50030012 100644 --- a/derivatives/labels_softseg_bin/sub-queensland04/anat/sub-queensland04_space-other_T2star_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-queensland04/anat/sub-queensland04_space-other_T2star_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:42" + "Date": "2022-10-22 14:36:42", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-queensland04/anat/sub-queensland04_space-other_T2w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-queensland04/anat/sub-queensland04_space-other_T2w_desc-softseg_label-SC_seg.json index e1b68a2928..4bbb66a72b 100644 --- a/derivatives/labels_softseg_bin/sub-queensland04/anat/sub-queensland04_space-other_T2w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-queensland04/anat/sub-queensland04_space-other_T2w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:42" + "Date": "2022-10-22 14:36:42", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-queensland05/anat/sub-queensland05_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-queensland05/anat/sub-queensland05_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json index e1b68a2928..db93662c6e 100644 --- a/derivatives/labels_softseg_bin/sub-queensland05/anat/sub-queensland05_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-queensland05/anat/sub-queensland05_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:42" + "Date": "2022-10-22 14:36:42", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-queensland05/anat/sub-queensland05_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-queensland05/anat/sub-queensland05_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json index a57528cfca..76f305fe51 100644 --- a/derivatives/labels_softseg_bin/sub-queensland05/anat/sub-queensland05_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-queensland05/anat/sub-queensland05_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:43" + "Date": "2022-10-22 14:36:43", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-queensland05/anat/sub-queensland05_space-other_T1w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-queensland05/anat/sub-queensland05_space-other_T1w_desc-softseg_label-SC_seg.json index a57528cfca..92b9da7662 100644 --- a/derivatives/labels_softseg_bin/sub-queensland05/anat/sub-queensland05_space-other_T1w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-queensland05/anat/sub-queensland05_space-other_T1w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:43" + "Date": "2022-10-22 14:36:43", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-queensland05/anat/sub-queensland05_space-other_T2star_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-queensland05/anat/sub-queensland05_space-other_T2star_desc-softseg_label-SC_seg.json index a57528cfca..737c0ea30c 100644 --- a/derivatives/labels_softseg_bin/sub-queensland05/anat/sub-queensland05_space-other_T2star_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-queensland05/anat/sub-queensland05_space-other_T2star_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:43" + "Date": "2022-10-22 14:36:43", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-queensland05/anat/sub-queensland05_space-other_T2w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-queensland05/anat/sub-queensland05_space-other_T2w_desc-softseg_label-SC_seg.json index a57528cfca..95e8d4ea2d 100644 --- a/derivatives/labels_softseg_bin/sub-queensland05/anat/sub-queensland05_space-other_T2w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-queensland05/anat/sub-queensland05_space-other_T2w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:43" + "Date": "2022-10-22 14:36:43", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-queensland06/anat/sub-queensland06_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-queensland06/anat/sub-queensland06_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json index a57528cfca..76f305fe51 100644 --- a/derivatives/labels_softseg_bin/sub-queensland06/anat/sub-queensland06_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-queensland06/anat/sub-queensland06_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:43" + "Date": "2022-10-22 14:36:43", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-queensland06/anat/sub-queensland06_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-queensland06/anat/sub-queensland06_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json index a57528cfca..76f305fe51 100644 --- a/derivatives/labels_softseg_bin/sub-queensland06/anat/sub-queensland06_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-queensland06/anat/sub-queensland06_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:43" + "Date": "2022-10-22 14:36:43", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-queensland06/anat/sub-queensland06_space-other_T1w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-queensland06/anat/sub-queensland06_space-other_T1w_desc-softseg_label-SC_seg.json index a57528cfca..92b9da7662 100644 --- a/derivatives/labels_softseg_bin/sub-queensland06/anat/sub-queensland06_space-other_T1w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-queensland06/anat/sub-queensland06_space-other_T1w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:43" + "Date": "2022-10-22 14:36:43", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-queensland06/anat/sub-queensland06_space-other_T2star_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-queensland06/anat/sub-queensland06_space-other_T2star_desc-softseg_label-SC_seg.json index a57528cfca..737c0ea30c 100644 --- a/derivatives/labels_softseg_bin/sub-queensland06/anat/sub-queensland06_space-other_T2star_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-queensland06/anat/sub-queensland06_space-other_T2star_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:43" + "Date": "2022-10-22 14:36:43", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-queensland06/anat/sub-queensland06_space-other_T2w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-queensland06/anat/sub-queensland06_space-other_T2w_desc-softseg_label-SC_seg.json index a57528cfca..95e8d4ea2d 100644 --- a/derivatives/labels_softseg_bin/sub-queensland06/anat/sub-queensland06_space-other_T2w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-queensland06/anat/sub-queensland06_space-other_T2w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:43" + "Date": "2022-10-22 14:36:43", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-sherbrooke01/anat/sub-sherbrooke01_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-sherbrooke01/anat/sub-sherbrooke01_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json index a57528cfca..76f305fe51 100644 --- a/derivatives/labels_softseg_bin/sub-sherbrooke01/anat/sub-sherbrooke01_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-sherbrooke01/anat/sub-sherbrooke01_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:43" + "Date": "2022-10-22 14:36:43", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-sherbrooke01/anat/sub-sherbrooke01_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-sherbrooke01/anat/sub-sherbrooke01_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json index a57528cfca..76f305fe51 100644 --- a/derivatives/labels_softseg_bin/sub-sherbrooke01/anat/sub-sherbrooke01_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-sherbrooke01/anat/sub-sherbrooke01_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:43" + "Date": "2022-10-22 14:36:43", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-sherbrooke01/anat/sub-sherbrooke01_space-other_T1w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-sherbrooke01/anat/sub-sherbrooke01_space-other_T1w_desc-softseg_label-SC_seg.json index a57528cfca..92b9da7662 100644 --- a/derivatives/labels_softseg_bin/sub-sherbrooke01/anat/sub-sherbrooke01_space-other_T1w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-sherbrooke01/anat/sub-sherbrooke01_space-other_T1w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:43" + "Date": "2022-10-22 14:36:43", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-sherbrooke01/anat/sub-sherbrooke01_space-other_T2star_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-sherbrooke01/anat/sub-sherbrooke01_space-other_T2star_desc-softseg_label-SC_seg.json index a57528cfca..737c0ea30c 100644 --- a/derivatives/labels_softseg_bin/sub-sherbrooke01/anat/sub-sherbrooke01_space-other_T2star_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-sherbrooke01/anat/sub-sherbrooke01_space-other_T2star_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:43" + "Date": "2022-10-22 14:36:43", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-sherbrooke01/anat/sub-sherbrooke01_space-other_T2w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-sherbrooke01/anat/sub-sherbrooke01_space-other_T2w_desc-softseg_label-SC_seg.json index a57528cfca..95e8d4ea2d 100644 --- a/derivatives/labels_softseg_bin/sub-sherbrooke01/anat/sub-sherbrooke01_space-other_T2w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-sherbrooke01/anat/sub-sherbrooke01_space-other_T2w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:43" + "Date": "2022-10-22 14:36:43", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-sherbrooke02/anat/sub-sherbrooke02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-sherbrooke02/anat/sub-sherbrooke02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json index a57528cfca..76f305fe51 100644 --- a/derivatives/labels_softseg_bin/sub-sherbrooke02/anat/sub-sherbrooke02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-sherbrooke02/anat/sub-sherbrooke02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:43" + "Date": "2022-10-22 14:36:43", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-sherbrooke02/anat/sub-sherbrooke02_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-sherbrooke02/anat/sub-sherbrooke02_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json index a57528cfca..76f305fe51 100644 --- a/derivatives/labels_softseg_bin/sub-sherbrooke02/anat/sub-sherbrooke02_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-sherbrooke02/anat/sub-sherbrooke02_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:43" + "Date": "2022-10-22 14:36:43", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-sherbrooke02/anat/sub-sherbrooke02_space-other_T1w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-sherbrooke02/anat/sub-sherbrooke02_space-other_T1w_desc-softseg_label-SC_seg.json index 576115d796..e4998e3024 100644 --- a/derivatives/labels_softseg_bin/sub-sherbrooke02/anat/sub-sherbrooke02_space-other_T1w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-sherbrooke02/anat/sub-sherbrooke02_space-other_T1w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:44" + "Date": "2022-10-22 14:36:44", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-sherbrooke02/anat/sub-sherbrooke02_space-other_T2star_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-sherbrooke02/anat/sub-sherbrooke02_space-other_T2star_desc-softseg_label-SC_seg.json index 576115d796..bc40e869a7 100644 --- a/derivatives/labels_softseg_bin/sub-sherbrooke02/anat/sub-sherbrooke02_space-other_T2star_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-sherbrooke02/anat/sub-sherbrooke02_space-other_T2star_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:44" + "Date": "2022-10-22 14:36:44", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-sherbrooke02/anat/sub-sherbrooke02_space-other_T2w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-sherbrooke02/anat/sub-sherbrooke02_space-other_T2w_desc-softseg_label-SC_seg.json index 576115d796..990dc806dc 100644 --- a/derivatives/labels_softseg_bin/sub-sherbrooke02/anat/sub-sherbrooke02_space-other_T2w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-sherbrooke02/anat/sub-sherbrooke02_space-other_T2w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:44" + "Date": "2022-10-22 14:36:44", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-sherbrooke03/anat/sub-sherbrooke03_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-sherbrooke03/anat/sub-sherbrooke03_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json index 576115d796..9c8e7b98b7 100644 --- a/derivatives/labels_softseg_bin/sub-sherbrooke03/anat/sub-sherbrooke03_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-sherbrooke03/anat/sub-sherbrooke03_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:44" + "Date": "2022-10-22 14:36:44", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-sherbrooke03/anat/sub-sherbrooke03_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-sherbrooke03/anat/sub-sherbrooke03_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json index 576115d796..9c8e7b98b7 100644 --- a/derivatives/labels_softseg_bin/sub-sherbrooke03/anat/sub-sherbrooke03_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-sherbrooke03/anat/sub-sherbrooke03_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:44" + "Date": "2022-10-22 14:36:44", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-sherbrooke03/anat/sub-sherbrooke03_space-other_T1w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-sherbrooke03/anat/sub-sherbrooke03_space-other_T1w_desc-softseg_label-SC_seg.json index 576115d796..e4998e3024 100644 --- a/derivatives/labels_softseg_bin/sub-sherbrooke03/anat/sub-sherbrooke03_space-other_T1w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-sherbrooke03/anat/sub-sherbrooke03_space-other_T1w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:44" + "Date": "2022-10-22 14:36:44", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-sherbrooke03/anat/sub-sherbrooke03_space-other_T2star_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-sherbrooke03/anat/sub-sherbrooke03_space-other_T2star_desc-softseg_label-SC_seg.json index 576115d796..bc40e869a7 100644 --- a/derivatives/labels_softseg_bin/sub-sherbrooke03/anat/sub-sherbrooke03_space-other_T2star_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-sherbrooke03/anat/sub-sherbrooke03_space-other_T2star_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:44" + "Date": "2022-10-22 14:36:44", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-sherbrooke03/anat/sub-sherbrooke03_space-other_T2w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-sherbrooke03/anat/sub-sherbrooke03_space-other_T2w_desc-softseg_label-SC_seg.json index 576115d796..990dc806dc 100644 --- a/derivatives/labels_softseg_bin/sub-sherbrooke03/anat/sub-sherbrooke03_space-other_T2w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-sherbrooke03/anat/sub-sherbrooke03_space-other_T2w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:44" + "Date": "2022-10-22 14:36:44", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-sherbrooke04/anat/sub-sherbrooke04_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-sherbrooke04/anat/sub-sherbrooke04_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json index 576115d796..9c8e7b98b7 100644 --- a/derivatives/labels_softseg_bin/sub-sherbrooke04/anat/sub-sherbrooke04_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-sherbrooke04/anat/sub-sherbrooke04_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:44" + "Date": "2022-10-22 14:36:44", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-sherbrooke04/anat/sub-sherbrooke04_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-sherbrooke04/anat/sub-sherbrooke04_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json index 576115d796..9c8e7b98b7 100644 --- a/derivatives/labels_softseg_bin/sub-sherbrooke04/anat/sub-sherbrooke04_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-sherbrooke04/anat/sub-sherbrooke04_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:44" + "Date": "2022-10-22 14:36:44", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-sherbrooke04/anat/sub-sherbrooke04_space-other_T1w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-sherbrooke04/anat/sub-sherbrooke04_space-other_T1w_desc-softseg_label-SC_seg.json index 576115d796..e4998e3024 100644 --- a/derivatives/labels_softseg_bin/sub-sherbrooke04/anat/sub-sherbrooke04_space-other_T1w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-sherbrooke04/anat/sub-sherbrooke04_space-other_T1w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:44" + "Date": "2022-10-22 14:36:44", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-sherbrooke04/anat/sub-sherbrooke04_space-other_T2star_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-sherbrooke04/anat/sub-sherbrooke04_space-other_T2star_desc-softseg_label-SC_seg.json index 576115d796..bc40e869a7 100644 --- a/derivatives/labels_softseg_bin/sub-sherbrooke04/anat/sub-sherbrooke04_space-other_T2star_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-sherbrooke04/anat/sub-sherbrooke04_space-other_T2star_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:44" + "Date": "2022-10-22 14:36:44", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-sherbrooke04/anat/sub-sherbrooke04_space-other_T2w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-sherbrooke04/anat/sub-sherbrooke04_space-other_T2w_desc-softseg_label-SC_seg.json index 576115d796..990dc806dc 100644 --- a/derivatives/labels_softseg_bin/sub-sherbrooke04/anat/sub-sherbrooke04_space-other_T2w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-sherbrooke04/anat/sub-sherbrooke04_space-other_T2w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:44" + "Date": "2022-10-22 14:36:44", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-sherbrooke05/anat/sub-sherbrooke05_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-sherbrooke05/anat/sub-sherbrooke05_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json index 576115d796..9c8e7b98b7 100644 --- a/derivatives/labels_softseg_bin/sub-sherbrooke05/anat/sub-sherbrooke05_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-sherbrooke05/anat/sub-sherbrooke05_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:44" + "Date": "2022-10-22 14:36:44", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-sherbrooke05/anat/sub-sherbrooke05_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-sherbrooke05/anat/sub-sherbrooke05_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json index 576115d796..9c8e7b98b7 100644 --- a/derivatives/labels_softseg_bin/sub-sherbrooke05/anat/sub-sherbrooke05_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-sherbrooke05/anat/sub-sherbrooke05_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:44" + "Date": "2022-10-22 14:36:44", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-sherbrooke05/anat/sub-sherbrooke05_space-other_T1w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-sherbrooke05/anat/sub-sherbrooke05_space-other_T1w_desc-softseg_label-SC_seg.json index 576115d796..e4998e3024 100644 --- a/derivatives/labels_softseg_bin/sub-sherbrooke05/anat/sub-sherbrooke05_space-other_T1w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-sherbrooke05/anat/sub-sherbrooke05_space-other_T1w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:44" + "Date": "2022-10-22 14:36:44", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-sherbrooke05/anat/sub-sherbrooke05_space-other_T2star_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-sherbrooke05/anat/sub-sherbrooke05_space-other_T2star_desc-softseg_label-SC_seg.json index 576115d796..bc40e869a7 100644 --- a/derivatives/labels_softseg_bin/sub-sherbrooke05/anat/sub-sherbrooke05_space-other_T2star_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-sherbrooke05/anat/sub-sherbrooke05_space-other_T2star_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:44" + "Date": "2022-10-22 14:36:44", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-sherbrooke05/anat/sub-sherbrooke05_space-other_T2w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-sherbrooke05/anat/sub-sherbrooke05_space-other_T2w_desc-softseg_label-SC_seg.json index 576115d796..990dc806dc 100644 --- a/derivatives/labels_softseg_bin/sub-sherbrooke05/anat/sub-sherbrooke05_space-other_T2w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-sherbrooke05/anat/sub-sherbrooke05_space-other_T2w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:44" + "Date": "2022-10-22 14:36:44", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-sherbrooke06/anat/sub-sherbrooke06_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-sherbrooke06/anat/sub-sherbrooke06_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json index 576115d796..9c8e7b98b7 100644 --- a/derivatives/labels_softseg_bin/sub-sherbrooke06/anat/sub-sherbrooke06_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-sherbrooke06/anat/sub-sherbrooke06_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:44" + "Date": "2022-10-22 14:36:44", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-sherbrooke06/anat/sub-sherbrooke06_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-sherbrooke06/anat/sub-sherbrooke06_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json index 576115d796..9c8e7b98b7 100644 --- a/derivatives/labels_softseg_bin/sub-sherbrooke06/anat/sub-sherbrooke06_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-sherbrooke06/anat/sub-sherbrooke06_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:44" + "Date": "2022-10-22 14:36:44", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-sherbrooke06/anat/sub-sherbrooke06_space-other_T1w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-sherbrooke06/anat/sub-sherbrooke06_space-other_T1w_desc-softseg_label-SC_seg.json index ed8f653a86..0a69cbe5d1 100644 --- a/derivatives/labels_softseg_bin/sub-sherbrooke06/anat/sub-sherbrooke06_space-other_T1w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-sherbrooke06/anat/sub-sherbrooke06_space-other_T1w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:45" + "Date": "2022-10-22 14:36:45", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-sherbrooke06/anat/sub-sherbrooke06_space-other_T2star_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-sherbrooke06/anat/sub-sherbrooke06_space-other_T2star_desc-softseg_label-SC_seg.json index ed8f653a86..30220bfae8 100644 --- a/derivatives/labels_softseg_bin/sub-sherbrooke06/anat/sub-sherbrooke06_space-other_T2star_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-sherbrooke06/anat/sub-sherbrooke06_space-other_T2star_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:45" + "Date": "2022-10-22 14:36:45", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-sherbrooke06/anat/sub-sherbrooke06_space-other_T2w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-sherbrooke06/anat/sub-sherbrooke06_space-other_T2w_desc-softseg_label-SC_seg.json index ed8f653a86..b68638c7a4 100644 --- a/derivatives/labels_softseg_bin/sub-sherbrooke06/anat/sub-sherbrooke06_space-other_T2w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-sherbrooke06/anat/sub-sherbrooke06_space-other_T2w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:45" + "Date": "2022-10-22 14:36:45", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-sherbrooke07/anat/sub-sherbrooke07_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-sherbrooke07/anat/sub-sherbrooke07_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json index ed8f653a86..694c8788ff 100644 --- a/derivatives/labels_softseg_bin/sub-sherbrooke07/anat/sub-sherbrooke07_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-sherbrooke07/anat/sub-sherbrooke07_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:45" + "Date": "2022-10-22 14:36:45", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-sherbrooke07/anat/sub-sherbrooke07_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-sherbrooke07/anat/sub-sherbrooke07_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json index ed8f653a86..694c8788ff 100644 --- a/derivatives/labels_softseg_bin/sub-sherbrooke07/anat/sub-sherbrooke07_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-sherbrooke07/anat/sub-sherbrooke07_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:45" + "Date": "2022-10-22 14:36:45", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-sherbrooke07/anat/sub-sherbrooke07_space-other_T1w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-sherbrooke07/anat/sub-sherbrooke07_space-other_T1w_desc-softseg_label-SC_seg.json index ed8f653a86..0a69cbe5d1 100644 --- a/derivatives/labels_softseg_bin/sub-sherbrooke07/anat/sub-sherbrooke07_space-other_T1w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-sherbrooke07/anat/sub-sherbrooke07_space-other_T1w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:45" + "Date": "2022-10-22 14:36:45", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-sherbrooke07/anat/sub-sherbrooke07_space-other_T2star_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-sherbrooke07/anat/sub-sherbrooke07_space-other_T2star_desc-softseg_label-SC_seg.json index ed8f653a86..30220bfae8 100644 --- a/derivatives/labels_softseg_bin/sub-sherbrooke07/anat/sub-sherbrooke07_space-other_T2star_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-sherbrooke07/anat/sub-sherbrooke07_space-other_T2star_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:45" + "Date": "2022-10-22 14:36:45", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-sherbrooke07/anat/sub-sherbrooke07_space-other_T2w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-sherbrooke07/anat/sub-sherbrooke07_space-other_T2w_desc-softseg_label-SC_seg.json index ed8f653a86..b68638c7a4 100644 --- a/derivatives/labels_softseg_bin/sub-sherbrooke07/anat/sub-sherbrooke07_space-other_T2w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-sherbrooke07/anat/sub-sherbrooke07_space-other_T2w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:45" + "Date": "2022-10-22 14:36:45", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-stanford01/anat/sub-stanford01_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-stanford01/anat/sub-stanford01_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json index ed8f653a86..694c8788ff 100644 --- a/derivatives/labels_softseg_bin/sub-stanford01/anat/sub-stanford01_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-stanford01/anat/sub-stanford01_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:45" + "Date": "2022-10-22 14:36:45", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-stanford01/anat/sub-stanford01_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-stanford01/anat/sub-stanford01_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json index ed8f653a86..694c8788ff 100644 --- a/derivatives/labels_softseg_bin/sub-stanford01/anat/sub-stanford01_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-stanford01/anat/sub-stanford01_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:45" + "Date": "2022-10-22 14:36:45", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-stanford01/anat/sub-stanford01_space-other_T1w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-stanford01/anat/sub-stanford01_space-other_T1w_desc-softseg_label-SC_seg.json index ed8f653a86..0a69cbe5d1 100644 --- a/derivatives/labels_softseg_bin/sub-stanford01/anat/sub-stanford01_space-other_T1w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-stanford01/anat/sub-stanford01_space-other_T1w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:45" + "Date": "2022-10-22 14:36:45", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-stanford01/anat/sub-stanford01_space-other_T2star_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-stanford01/anat/sub-stanford01_space-other_T2star_desc-softseg_label-SC_seg.json index ed8f653a86..30220bfae8 100644 --- a/derivatives/labels_softseg_bin/sub-stanford01/anat/sub-stanford01_space-other_T2star_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-stanford01/anat/sub-stanford01_space-other_T2star_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:45" + "Date": "2022-10-22 14:36:45", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-stanford01/anat/sub-stanford01_space-other_T2w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-stanford01/anat/sub-stanford01_space-other_T2w_desc-softseg_label-SC_seg.json index ed8f653a86..b68638c7a4 100644 --- a/derivatives/labels_softseg_bin/sub-stanford01/anat/sub-stanford01_space-other_T2w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-stanford01/anat/sub-stanford01_space-other_T2w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:45" + "Date": "2022-10-22 14:36:45", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-stanford02/anat/sub-stanford02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-stanford02/anat/sub-stanford02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json index ed8f653a86..694c8788ff 100644 --- a/derivatives/labels_softseg_bin/sub-stanford02/anat/sub-stanford02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-stanford02/anat/sub-stanford02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:45" + "Date": "2022-10-22 14:36:45", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-stanford02/anat/sub-stanford02_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-stanford02/anat/sub-stanford02_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json index ed8f653a86..694c8788ff 100644 --- a/derivatives/labels_softseg_bin/sub-stanford02/anat/sub-stanford02_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-stanford02/anat/sub-stanford02_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:45" + "Date": "2022-10-22 14:36:45", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-stanford02/anat/sub-stanford02_space-other_T1w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-stanford02/anat/sub-stanford02_space-other_T1w_desc-softseg_label-SC_seg.json index ed8f653a86..0a69cbe5d1 100644 --- a/derivatives/labels_softseg_bin/sub-stanford02/anat/sub-stanford02_space-other_T1w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-stanford02/anat/sub-stanford02_space-other_T1w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:45" + "Date": "2022-10-22 14:36:45", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-stanford02/anat/sub-stanford02_space-other_T2star_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-stanford02/anat/sub-stanford02_space-other_T2star_desc-softseg_label-SC_seg.json index ed8f653a86..30220bfae8 100644 --- a/derivatives/labels_softseg_bin/sub-stanford02/anat/sub-stanford02_space-other_T2star_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-stanford02/anat/sub-stanford02_space-other_T2star_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:45" + "Date": "2022-10-22 14:36:45", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-stanford02/anat/sub-stanford02_space-other_T2w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-stanford02/anat/sub-stanford02_space-other_T2w_desc-softseg_label-SC_seg.json index ed8f653a86..b68638c7a4 100644 --- a/derivatives/labels_softseg_bin/sub-stanford02/anat/sub-stanford02_space-other_T2w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-stanford02/anat/sub-stanford02_space-other_T2w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:45" + "Date": "2022-10-22 14:36:45", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-stanford03/anat/sub-stanford03_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-stanford03/anat/sub-stanford03_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json index ed8f653a86..694c8788ff 100644 --- a/derivatives/labels_softseg_bin/sub-stanford03/anat/sub-stanford03_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-stanford03/anat/sub-stanford03_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:45" + "Date": "2022-10-22 14:36:45", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-stanford03/anat/sub-stanford03_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-stanford03/anat/sub-stanford03_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json index ed8f653a86..694c8788ff 100644 --- a/derivatives/labels_softseg_bin/sub-stanford03/anat/sub-stanford03_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-stanford03/anat/sub-stanford03_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:45" + "Date": "2022-10-22 14:36:45", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-stanford03/anat/sub-stanford03_space-other_T1w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-stanford03/anat/sub-stanford03_space-other_T1w_desc-softseg_label-SC_seg.json index ed8f653a86..0a69cbe5d1 100644 --- a/derivatives/labels_softseg_bin/sub-stanford03/anat/sub-stanford03_space-other_T1w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-stanford03/anat/sub-stanford03_space-other_T1w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:45" + "Date": "2022-10-22 14:36:45", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-stanford03/anat/sub-stanford03_space-other_T2star_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-stanford03/anat/sub-stanford03_space-other_T2star_desc-softseg_label-SC_seg.json index ed8f653a86..30220bfae8 100644 --- a/derivatives/labels_softseg_bin/sub-stanford03/anat/sub-stanford03_space-other_T2star_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-stanford03/anat/sub-stanford03_space-other_T2star_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:45" + "Date": "2022-10-22 14:36:45", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-stanford03/anat/sub-stanford03_space-other_T2w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-stanford03/anat/sub-stanford03_space-other_T2w_desc-softseg_label-SC_seg.json index ed8f653a86..b68638c7a4 100644 --- a/derivatives/labels_softseg_bin/sub-stanford03/anat/sub-stanford03_space-other_T2w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-stanford03/anat/sub-stanford03_space-other_T2w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:45" + "Date": "2022-10-22 14:36:45", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-stanford04/anat/sub-stanford04_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-stanford04/anat/sub-stanford04_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json index 262635f88a..27281765ad 100644 --- a/derivatives/labels_softseg_bin/sub-stanford04/anat/sub-stanford04_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-stanford04/anat/sub-stanford04_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:46" + "Date": "2022-10-22 14:36:46", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-stanford04/anat/sub-stanford04_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-stanford04/anat/sub-stanford04_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json index 262635f88a..27281765ad 100644 --- a/derivatives/labels_softseg_bin/sub-stanford04/anat/sub-stanford04_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-stanford04/anat/sub-stanford04_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:46" + "Date": "2022-10-22 14:36:46", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-stanford04/anat/sub-stanford04_space-other_T1w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-stanford04/anat/sub-stanford04_space-other_T1w_desc-softseg_label-SC_seg.json index 262635f88a..7ccf096079 100644 --- a/derivatives/labels_softseg_bin/sub-stanford04/anat/sub-stanford04_space-other_T1w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-stanford04/anat/sub-stanford04_space-other_T1w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:46" + "Date": "2022-10-22 14:36:46", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-stanford04/anat/sub-stanford04_space-other_T2star_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-stanford04/anat/sub-stanford04_space-other_T2star_desc-softseg_label-SC_seg.json index 262635f88a..03c237b3e5 100644 --- a/derivatives/labels_softseg_bin/sub-stanford04/anat/sub-stanford04_space-other_T2star_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-stanford04/anat/sub-stanford04_space-other_T2star_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:46" + "Date": "2022-10-22 14:36:46", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-stanford04/anat/sub-stanford04_space-other_T2w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-stanford04/anat/sub-stanford04_space-other_T2w_desc-softseg_label-SC_seg.json index 262635f88a..ce3643d8d3 100644 --- a/derivatives/labels_softseg_bin/sub-stanford04/anat/sub-stanford04_space-other_T2w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-stanford04/anat/sub-stanford04_space-other_T2w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:46" + "Date": "2022-10-22 14:36:46", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-stanford05/anat/sub-stanford05_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-stanford05/anat/sub-stanford05_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json index 262635f88a..27281765ad 100644 --- a/derivatives/labels_softseg_bin/sub-stanford05/anat/sub-stanford05_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-stanford05/anat/sub-stanford05_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:46" + "Date": "2022-10-22 14:36:46", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-stanford05/anat/sub-stanford05_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-stanford05/anat/sub-stanford05_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json index 262635f88a..27281765ad 100644 --- a/derivatives/labels_softseg_bin/sub-stanford05/anat/sub-stanford05_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-stanford05/anat/sub-stanford05_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:46" + "Date": "2022-10-22 14:36:46", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-stanford05/anat/sub-stanford05_space-other_T1w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-stanford05/anat/sub-stanford05_space-other_T1w_desc-softseg_label-SC_seg.json index 262635f88a..7ccf096079 100644 --- a/derivatives/labels_softseg_bin/sub-stanford05/anat/sub-stanford05_space-other_T1w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-stanford05/anat/sub-stanford05_space-other_T1w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:46" + "Date": "2022-10-22 14:36:46", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-stanford05/anat/sub-stanford05_space-other_T2star_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-stanford05/anat/sub-stanford05_space-other_T2star_desc-softseg_label-SC_seg.json index 262635f88a..03c237b3e5 100644 --- a/derivatives/labels_softseg_bin/sub-stanford05/anat/sub-stanford05_space-other_T2star_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-stanford05/anat/sub-stanford05_space-other_T2star_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:46" + "Date": "2022-10-22 14:36:46", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-stanford05/anat/sub-stanford05_space-other_T2w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-stanford05/anat/sub-stanford05_space-other_T2w_desc-softseg_label-SC_seg.json index 262635f88a..ce3643d8d3 100644 --- a/derivatives/labels_softseg_bin/sub-stanford05/anat/sub-stanford05_space-other_T2w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-stanford05/anat/sub-stanford05_space-other_T2w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:46" + "Date": "2022-10-22 14:36:46", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-stanford06/anat/sub-stanford06_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-stanford06/anat/sub-stanford06_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json index 262635f88a..27281765ad 100644 --- a/derivatives/labels_softseg_bin/sub-stanford06/anat/sub-stanford06_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-stanford06/anat/sub-stanford06_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:46" + "Date": "2022-10-22 14:36:46", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-stanford06/anat/sub-stanford06_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-stanford06/anat/sub-stanford06_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json index 262635f88a..27281765ad 100644 --- a/derivatives/labels_softseg_bin/sub-stanford06/anat/sub-stanford06_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-stanford06/anat/sub-stanford06_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:46" + "Date": "2022-10-22 14:36:46", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-stanford06/anat/sub-stanford06_space-other_T1w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-stanford06/anat/sub-stanford06_space-other_T1w_desc-softseg_label-SC_seg.json index 262635f88a..7ccf096079 100644 --- a/derivatives/labels_softseg_bin/sub-stanford06/anat/sub-stanford06_space-other_T1w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-stanford06/anat/sub-stanford06_space-other_T1w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:46" + "Date": "2022-10-22 14:36:46", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-stanford06/anat/sub-stanford06_space-other_T2star_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-stanford06/anat/sub-stanford06_space-other_T2star_desc-softseg_label-SC_seg.json index 262635f88a..03c237b3e5 100644 --- a/derivatives/labels_softseg_bin/sub-stanford06/anat/sub-stanford06_space-other_T2star_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-stanford06/anat/sub-stanford06_space-other_T2star_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:46" + "Date": "2022-10-22 14:36:46", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-stanford06/anat/sub-stanford06_space-other_T2w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-stanford06/anat/sub-stanford06_space-other_T2w_desc-softseg_label-SC_seg.json index 262635f88a..ce3643d8d3 100644 --- a/derivatives/labels_softseg_bin/sub-stanford06/anat/sub-stanford06_space-other_T2w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-stanford06/anat/sub-stanford06_space-other_T2w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:46" + "Date": "2022-10-22 14:36:46", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-strasbourg01/anat/sub-strasbourg01_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-strasbourg01/anat/sub-strasbourg01_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json index 262635f88a..27281765ad 100644 --- a/derivatives/labels_softseg_bin/sub-strasbourg01/anat/sub-strasbourg01_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-strasbourg01/anat/sub-strasbourg01_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:46" + "Date": "2022-10-22 14:36:46", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-strasbourg01/anat/sub-strasbourg01_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-strasbourg01/anat/sub-strasbourg01_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json index 262635f88a..27281765ad 100644 --- a/derivatives/labels_softseg_bin/sub-strasbourg01/anat/sub-strasbourg01_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-strasbourg01/anat/sub-strasbourg01_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:46" + "Date": "2022-10-22 14:36:46", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-strasbourg01/anat/sub-strasbourg01_space-other_T1w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-strasbourg01/anat/sub-strasbourg01_space-other_T1w_desc-softseg_label-SC_seg.json index 262635f88a..7ccf096079 100644 --- a/derivatives/labels_softseg_bin/sub-strasbourg01/anat/sub-strasbourg01_space-other_T1w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-strasbourg01/anat/sub-strasbourg01_space-other_T1w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:46" + "Date": "2022-10-22 14:36:46", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-strasbourg01/anat/sub-strasbourg01_space-other_T2star_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-strasbourg01/anat/sub-strasbourg01_space-other_T2star_desc-softseg_label-SC_seg.json index 7de3cf067a..fcdbde584a 100644 --- a/derivatives/labels_softseg_bin/sub-strasbourg01/anat/sub-strasbourg01_space-other_T2star_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-strasbourg01/anat/sub-strasbourg01_space-other_T2star_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:47" + "Date": "2022-10-22 14:36:47", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-strasbourg01/anat/sub-strasbourg01_space-other_T2w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-strasbourg01/anat/sub-strasbourg01_space-other_T2w_desc-softseg_label-SC_seg.json index 7de3cf067a..c251d1b51b 100644 --- a/derivatives/labels_softseg_bin/sub-strasbourg01/anat/sub-strasbourg01_space-other_T2w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-strasbourg01/anat/sub-strasbourg01_space-other_T2w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:47" + "Date": "2022-10-22 14:36:47", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-strasbourg02/anat/sub-strasbourg02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-strasbourg02/anat/sub-strasbourg02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json index 7de3cf067a..3450703d8c 100644 --- a/derivatives/labels_softseg_bin/sub-strasbourg02/anat/sub-strasbourg02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-strasbourg02/anat/sub-strasbourg02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:47" + "Date": "2022-10-22 14:36:47", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-strasbourg02/anat/sub-strasbourg02_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-strasbourg02/anat/sub-strasbourg02_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json index 7de3cf067a..3450703d8c 100644 --- a/derivatives/labels_softseg_bin/sub-strasbourg02/anat/sub-strasbourg02_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-strasbourg02/anat/sub-strasbourg02_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:47" + "Date": "2022-10-22 14:36:47", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-strasbourg02/anat/sub-strasbourg02_space-other_T1w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-strasbourg02/anat/sub-strasbourg02_space-other_T1w_desc-softseg_label-SC_seg.json index 7de3cf067a..4f77d7feec 100644 --- a/derivatives/labels_softseg_bin/sub-strasbourg02/anat/sub-strasbourg02_space-other_T1w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-strasbourg02/anat/sub-strasbourg02_space-other_T1w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:47" + "Date": "2022-10-22 14:36:47", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-strasbourg02/anat/sub-strasbourg02_space-other_T2star_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-strasbourg02/anat/sub-strasbourg02_space-other_T2star_desc-softseg_label-SC_seg.json index 7de3cf067a..fcdbde584a 100644 --- a/derivatives/labels_softseg_bin/sub-strasbourg02/anat/sub-strasbourg02_space-other_T2star_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-strasbourg02/anat/sub-strasbourg02_space-other_T2star_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:47" + "Date": "2022-10-22 14:36:47", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-strasbourg02/anat/sub-strasbourg02_space-other_T2w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-strasbourg02/anat/sub-strasbourg02_space-other_T2w_desc-softseg_label-SC_seg.json index 7de3cf067a..c251d1b51b 100644 --- a/derivatives/labels_softseg_bin/sub-strasbourg02/anat/sub-strasbourg02_space-other_T2w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-strasbourg02/anat/sub-strasbourg02_space-other_T2w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:47" + "Date": "2022-10-22 14:36:47", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-strasbourg03/anat/sub-strasbourg03_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-strasbourg03/anat/sub-strasbourg03_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json index 7de3cf067a..3450703d8c 100644 --- a/derivatives/labels_softseg_bin/sub-strasbourg03/anat/sub-strasbourg03_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-strasbourg03/anat/sub-strasbourg03_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:47" + "Date": "2022-10-22 14:36:47", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-strasbourg03/anat/sub-strasbourg03_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-strasbourg03/anat/sub-strasbourg03_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json index 7de3cf067a..3450703d8c 100644 --- a/derivatives/labels_softseg_bin/sub-strasbourg03/anat/sub-strasbourg03_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-strasbourg03/anat/sub-strasbourg03_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:47" + "Date": "2022-10-22 14:36:47", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-strasbourg03/anat/sub-strasbourg03_space-other_T1w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-strasbourg03/anat/sub-strasbourg03_space-other_T1w_desc-softseg_label-SC_seg.json index 7de3cf067a..4f77d7feec 100644 --- a/derivatives/labels_softseg_bin/sub-strasbourg03/anat/sub-strasbourg03_space-other_T1w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-strasbourg03/anat/sub-strasbourg03_space-other_T1w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:47" + "Date": "2022-10-22 14:36:47", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-strasbourg03/anat/sub-strasbourg03_space-other_T2star_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-strasbourg03/anat/sub-strasbourg03_space-other_T2star_desc-softseg_label-SC_seg.json index 7de3cf067a..fcdbde584a 100644 --- a/derivatives/labels_softseg_bin/sub-strasbourg03/anat/sub-strasbourg03_space-other_T2star_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-strasbourg03/anat/sub-strasbourg03_space-other_T2star_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:47" + "Date": "2022-10-22 14:36:47", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-strasbourg03/anat/sub-strasbourg03_space-other_T2w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-strasbourg03/anat/sub-strasbourg03_space-other_T2w_desc-softseg_label-SC_seg.json index 7de3cf067a..c251d1b51b 100644 --- a/derivatives/labels_softseg_bin/sub-strasbourg03/anat/sub-strasbourg03_space-other_T2w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-strasbourg03/anat/sub-strasbourg03_space-other_T2w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:47" + "Date": "2022-10-22 14:36:47", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-strasbourg04/anat/sub-strasbourg04_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-strasbourg04/anat/sub-strasbourg04_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json index 7de3cf067a..3450703d8c 100644 --- a/derivatives/labels_softseg_bin/sub-strasbourg04/anat/sub-strasbourg04_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-strasbourg04/anat/sub-strasbourg04_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:47" + "Date": "2022-10-22 14:36:47", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-strasbourg04/anat/sub-strasbourg04_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-strasbourg04/anat/sub-strasbourg04_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json index 7de3cf067a..3450703d8c 100644 --- a/derivatives/labels_softseg_bin/sub-strasbourg04/anat/sub-strasbourg04_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-strasbourg04/anat/sub-strasbourg04_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:47" + "Date": "2022-10-22 14:36:47", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-strasbourg04/anat/sub-strasbourg04_space-other_T1w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-strasbourg04/anat/sub-strasbourg04_space-other_T1w_desc-softseg_label-SC_seg.json index 7de3cf067a..4f77d7feec 100644 --- a/derivatives/labels_softseg_bin/sub-strasbourg04/anat/sub-strasbourg04_space-other_T1w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-strasbourg04/anat/sub-strasbourg04_space-other_T1w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:47" + "Date": "2022-10-22 14:36:47", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-strasbourg04/anat/sub-strasbourg04_space-other_T2star_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-strasbourg04/anat/sub-strasbourg04_space-other_T2star_desc-softseg_label-SC_seg.json index 7de3cf067a..fcdbde584a 100644 --- a/derivatives/labels_softseg_bin/sub-strasbourg04/anat/sub-strasbourg04_space-other_T2star_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-strasbourg04/anat/sub-strasbourg04_space-other_T2star_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:47" + "Date": "2022-10-22 14:36:47", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-strasbourg04/anat/sub-strasbourg04_space-other_T2w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-strasbourg04/anat/sub-strasbourg04_space-other_T2w_desc-softseg_label-SC_seg.json index 7de3cf067a..c251d1b51b 100644 --- a/derivatives/labels_softseg_bin/sub-strasbourg04/anat/sub-strasbourg04_space-other_T2w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-strasbourg04/anat/sub-strasbourg04_space-other_T2w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:47" + "Date": "2022-10-22 14:36:47", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-strasbourg05/anat/sub-strasbourg05_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-strasbourg05/anat/sub-strasbourg05_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json index 7de3cf067a..3450703d8c 100644 --- a/derivatives/labels_softseg_bin/sub-strasbourg05/anat/sub-strasbourg05_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-strasbourg05/anat/sub-strasbourg05_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:47" + "Date": "2022-10-22 14:36:47", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-strasbourg05/anat/sub-strasbourg05_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-strasbourg05/anat/sub-strasbourg05_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json index 7de3cf067a..3450703d8c 100644 --- a/derivatives/labels_softseg_bin/sub-strasbourg05/anat/sub-strasbourg05_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-strasbourg05/anat/sub-strasbourg05_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:47" + "Date": "2022-10-22 14:36:47", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-strasbourg05/anat/sub-strasbourg05_space-other_T1w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-strasbourg05/anat/sub-strasbourg05_space-other_T1w_desc-softseg_label-SC_seg.json index 7de3cf067a..4f77d7feec 100644 --- a/derivatives/labels_softseg_bin/sub-strasbourg05/anat/sub-strasbourg05_space-other_T1w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-strasbourg05/anat/sub-strasbourg05_space-other_T1w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:47" + "Date": "2022-10-22 14:36:47", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-strasbourg05/anat/sub-strasbourg05_space-other_T2star_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-strasbourg05/anat/sub-strasbourg05_space-other_T2star_desc-softseg_label-SC_seg.json index 7de3cf067a..fcdbde584a 100644 --- a/derivatives/labels_softseg_bin/sub-strasbourg05/anat/sub-strasbourg05_space-other_T2star_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-strasbourg05/anat/sub-strasbourg05_space-other_T2star_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:47" + "Date": "2022-10-22 14:36:47", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-strasbourg05/anat/sub-strasbourg05_space-other_T2w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-strasbourg05/anat/sub-strasbourg05_space-other_T2w_desc-softseg_label-SC_seg.json index 7de3cf067a..c251d1b51b 100644 --- a/derivatives/labels_softseg_bin/sub-strasbourg05/anat/sub-strasbourg05_space-other_T2w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-strasbourg05/anat/sub-strasbourg05_space-other_T2w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:47" + "Date": "2022-10-22 14:36:47", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-strasbourg06/anat/sub-strasbourg06_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-strasbourg06/anat/sub-strasbourg06_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json index 7de3cf067a..3450703d8c 100644 --- a/derivatives/labels_softseg_bin/sub-strasbourg06/anat/sub-strasbourg06_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-strasbourg06/anat/sub-strasbourg06_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:47" + "Date": "2022-10-22 14:36:47", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-strasbourg06/anat/sub-strasbourg06_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-strasbourg06/anat/sub-strasbourg06_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json index 7de3cf067a..3450703d8c 100644 --- a/derivatives/labels_softseg_bin/sub-strasbourg06/anat/sub-strasbourg06_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-strasbourg06/anat/sub-strasbourg06_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:47" + "Date": "2022-10-22 14:36:47", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-strasbourg06/anat/sub-strasbourg06_space-other_T1w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-strasbourg06/anat/sub-strasbourg06_space-other_T1w_desc-softseg_label-SC_seg.json index 7de3cf067a..4f77d7feec 100644 --- a/derivatives/labels_softseg_bin/sub-strasbourg06/anat/sub-strasbourg06_space-other_T1w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-strasbourg06/anat/sub-strasbourg06_space-other_T1w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:47" + "Date": "2022-10-22 14:36:47", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-strasbourg06/anat/sub-strasbourg06_space-other_T2star_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-strasbourg06/anat/sub-strasbourg06_space-other_T2star_desc-softseg_label-SC_seg.json index cb1ada3a45..8d9d298753 100644 --- a/derivatives/labels_softseg_bin/sub-strasbourg06/anat/sub-strasbourg06_space-other_T2star_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-strasbourg06/anat/sub-strasbourg06_space-other_T2star_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:48" + "Date": "2022-10-22 14:36:48", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-strasbourg06/anat/sub-strasbourg06_space-other_T2w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-strasbourg06/anat/sub-strasbourg06_space-other_T2w_desc-softseg_label-SC_seg.json index cb1ada3a45..55f98278cf 100644 --- a/derivatives/labels_softseg_bin/sub-strasbourg06/anat/sub-strasbourg06_space-other_T2w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-strasbourg06/anat/sub-strasbourg06_space-other_T2w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:48" + "Date": "2022-10-22 14:36:48", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-tehranS01/anat/sub-tehranS01_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-tehranS01/anat/sub-tehranS01_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json index cb1ada3a45..033c72efc0 100644 --- a/derivatives/labels_softseg_bin/sub-tehranS01/anat/sub-tehranS01_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-tehranS01/anat/sub-tehranS01_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:48" + "Date": "2022-10-22 14:36:48", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-tehranS01/anat/sub-tehranS01_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-tehranS01/anat/sub-tehranS01_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json index cb1ada3a45..033c72efc0 100644 --- a/derivatives/labels_softseg_bin/sub-tehranS01/anat/sub-tehranS01_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-tehranS01/anat/sub-tehranS01_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:48" + "Date": "2022-10-22 14:36:48", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-tehranS01/anat/sub-tehranS01_space-other_T1w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-tehranS01/anat/sub-tehranS01_space-other_T1w_desc-softseg_label-SC_seg.json index cb1ada3a45..958f8cdb87 100644 --- a/derivatives/labels_softseg_bin/sub-tehranS01/anat/sub-tehranS01_space-other_T1w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-tehranS01/anat/sub-tehranS01_space-other_T1w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:48" + "Date": "2022-10-22 14:36:48", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-tehranS01/anat/sub-tehranS01_space-other_T2star_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-tehranS01/anat/sub-tehranS01_space-other_T2star_desc-softseg_label-SC_seg.json index cb1ada3a45..8d9d298753 100644 --- a/derivatives/labels_softseg_bin/sub-tehranS01/anat/sub-tehranS01_space-other_T2star_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-tehranS01/anat/sub-tehranS01_space-other_T2star_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:48" + "Date": "2022-10-22 14:36:48", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-tehranS01/anat/sub-tehranS01_space-other_T2w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-tehranS01/anat/sub-tehranS01_space-other_T2w_desc-softseg_label-SC_seg.json index cb1ada3a45..55f98278cf 100644 --- a/derivatives/labels_softseg_bin/sub-tehranS01/anat/sub-tehranS01_space-other_T2w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-tehranS01/anat/sub-tehranS01_space-other_T2w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:48" + "Date": "2022-10-22 14:36:48", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-tehranS02/anat/sub-tehranS02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-tehranS02/anat/sub-tehranS02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json index cb1ada3a45..033c72efc0 100644 --- a/derivatives/labels_softseg_bin/sub-tehranS02/anat/sub-tehranS02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-tehranS02/anat/sub-tehranS02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:48" + "Date": "2022-10-22 14:36:48", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-tehranS02/anat/sub-tehranS02_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-tehranS02/anat/sub-tehranS02_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json index cb1ada3a45..033c72efc0 100644 --- a/derivatives/labels_softseg_bin/sub-tehranS02/anat/sub-tehranS02_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-tehranS02/anat/sub-tehranS02_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:48" + "Date": "2022-10-22 14:36:48", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-tehranS02/anat/sub-tehranS02_space-other_T1w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-tehranS02/anat/sub-tehranS02_space-other_T1w_desc-softseg_label-SC_seg.json index cb1ada3a45..958f8cdb87 100644 --- a/derivatives/labels_softseg_bin/sub-tehranS02/anat/sub-tehranS02_space-other_T1w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-tehranS02/anat/sub-tehranS02_space-other_T1w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:48" + "Date": "2022-10-22 14:36:48", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-tehranS02/anat/sub-tehranS02_space-other_T2star_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-tehranS02/anat/sub-tehranS02_space-other_T2star_desc-softseg_label-SC_seg.json index cb1ada3a45..8d9d298753 100644 --- a/derivatives/labels_softseg_bin/sub-tehranS02/anat/sub-tehranS02_space-other_T2star_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-tehranS02/anat/sub-tehranS02_space-other_T2star_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:48" + "Date": "2022-10-22 14:36:48", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-tehranS02/anat/sub-tehranS02_space-other_T2w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-tehranS02/anat/sub-tehranS02_space-other_T2w_desc-softseg_label-SC_seg.json index cb1ada3a45..55f98278cf 100644 --- a/derivatives/labels_softseg_bin/sub-tehranS02/anat/sub-tehranS02_space-other_T2w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-tehranS02/anat/sub-tehranS02_space-other_T2w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:48" + "Date": "2022-10-22 14:36:48", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-tehranS03/anat/sub-tehranS03_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-tehranS03/anat/sub-tehranS03_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json index cb1ada3a45..033c72efc0 100644 --- a/derivatives/labels_softseg_bin/sub-tehranS03/anat/sub-tehranS03_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-tehranS03/anat/sub-tehranS03_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:48" + "Date": "2022-10-22 14:36:48", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-tehranS03/anat/sub-tehranS03_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-tehranS03/anat/sub-tehranS03_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json index cb1ada3a45..033c72efc0 100644 --- a/derivatives/labels_softseg_bin/sub-tehranS03/anat/sub-tehranS03_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-tehranS03/anat/sub-tehranS03_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:48" + "Date": "2022-10-22 14:36:48", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-tehranS03/anat/sub-tehranS03_space-other_T1w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-tehranS03/anat/sub-tehranS03_space-other_T1w_desc-softseg_label-SC_seg.json index cb1ada3a45..958f8cdb87 100644 --- a/derivatives/labels_softseg_bin/sub-tehranS03/anat/sub-tehranS03_space-other_T1w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-tehranS03/anat/sub-tehranS03_space-other_T1w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:48" + "Date": "2022-10-22 14:36:48", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-tehranS03/anat/sub-tehranS03_space-other_T2star_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-tehranS03/anat/sub-tehranS03_space-other_T2star_desc-softseg_label-SC_seg.json index cb1ada3a45..8d9d298753 100644 --- a/derivatives/labels_softseg_bin/sub-tehranS03/anat/sub-tehranS03_space-other_T2star_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-tehranS03/anat/sub-tehranS03_space-other_T2star_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:48" + "Date": "2022-10-22 14:36:48", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-tehranS03/anat/sub-tehranS03_space-other_T2w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-tehranS03/anat/sub-tehranS03_space-other_T2w_desc-softseg_label-SC_seg.json index cb1ada3a45..55f98278cf 100644 --- a/derivatives/labels_softseg_bin/sub-tehranS03/anat/sub-tehranS03_space-other_T2w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-tehranS03/anat/sub-tehranS03_space-other_T2w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:48" + "Date": "2022-10-22 14:36:48", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-tehranS04/anat/sub-tehranS04_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-tehranS04/anat/sub-tehranS04_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json index cb1ada3a45..033c72efc0 100644 --- a/derivatives/labels_softseg_bin/sub-tehranS04/anat/sub-tehranS04_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-tehranS04/anat/sub-tehranS04_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:48" + "Date": "2022-10-22 14:36:48", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-tehranS04/anat/sub-tehranS04_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-tehranS04/anat/sub-tehranS04_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json index cb1ada3a45..033c72efc0 100644 --- a/derivatives/labels_softseg_bin/sub-tehranS04/anat/sub-tehranS04_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-tehranS04/anat/sub-tehranS04_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:48" + "Date": "2022-10-22 14:36:48", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-tehranS04/anat/sub-tehranS04_space-other_T1w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-tehranS04/anat/sub-tehranS04_space-other_T1w_desc-softseg_label-SC_seg.json index cb1ada3a45..958f8cdb87 100644 --- a/derivatives/labels_softseg_bin/sub-tehranS04/anat/sub-tehranS04_space-other_T1w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-tehranS04/anat/sub-tehranS04_space-other_T1w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:48" + "Date": "2022-10-22 14:36:48", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-tehranS04/anat/sub-tehranS04_space-other_T2star_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-tehranS04/anat/sub-tehranS04_space-other_T2star_desc-softseg_label-SC_seg.json index cb1ada3a45..8d9d298753 100644 --- a/derivatives/labels_softseg_bin/sub-tehranS04/anat/sub-tehranS04_space-other_T2star_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-tehranS04/anat/sub-tehranS04_space-other_T2star_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:48" + "Date": "2022-10-22 14:36:48", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-tehranS04/anat/sub-tehranS04_space-other_T2w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-tehranS04/anat/sub-tehranS04_space-other_T2w_desc-softseg_label-SC_seg.json index cb1ada3a45..55f98278cf 100644 --- a/derivatives/labels_softseg_bin/sub-tehranS04/anat/sub-tehranS04_space-other_T2w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-tehranS04/anat/sub-tehranS04_space-other_T2w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:48" + "Date": "2022-10-22 14:36:48", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-tehranS05/anat/sub-tehranS05_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-tehranS05/anat/sub-tehranS05_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json index e41d6ca48c..f7ba143b31 100644 --- a/derivatives/labels_softseg_bin/sub-tehranS05/anat/sub-tehranS05_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-tehranS05/anat/sub-tehranS05_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:49" + "Date": "2022-10-22 14:36:49", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-tehranS05/anat/sub-tehranS05_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-tehranS05/anat/sub-tehranS05_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json index e41d6ca48c..f7ba143b31 100644 --- a/derivatives/labels_softseg_bin/sub-tehranS05/anat/sub-tehranS05_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-tehranS05/anat/sub-tehranS05_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:49" + "Date": "2022-10-22 14:36:49", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-tehranS05/anat/sub-tehranS05_space-other_T1w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-tehranS05/anat/sub-tehranS05_space-other_T1w_desc-softseg_label-SC_seg.json index e41d6ca48c..2cac173070 100644 --- a/derivatives/labels_softseg_bin/sub-tehranS05/anat/sub-tehranS05_space-other_T1w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-tehranS05/anat/sub-tehranS05_space-other_T1w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:49" + "Date": "2022-10-22 14:36:49", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-tehranS05/anat/sub-tehranS05_space-other_T2star_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-tehranS05/anat/sub-tehranS05_space-other_T2star_desc-softseg_label-SC_seg.json index e41d6ca48c..9f0eafa81c 100644 --- a/derivatives/labels_softseg_bin/sub-tehranS05/anat/sub-tehranS05_space-other_T2star_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-tehranS05/anat/sub-tehranS05_space-other_T2star_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:49" + "Date": "2022-10-22 14:36:49", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-tehranS05/anat/sub-tehranS05_space-other_T2w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-tehranS05/anat/sub-tehranS05_space-other_T2w_desc-softseg_label-SC_seg.json index e41d6ca48c..285d95dae4 100644 --- a/derivatives/labels_softseg_bin/sub-tehranS05/anat/sub-tehranS05_space-other_T2w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-tehranS05/anat/sub-tehranS05_space-other_T2w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:49" + "Date": "2022-10-22 14:36:49", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-tehranS06/anat/sub-tehranS06_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-tehranS06/anat/sub-tehranS06_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json index e41d6ca48c..f7ba143b31 100644 --- a/derivatives/labels_softseg_bin/sub-tehranS06/anat/sub-tehranS06_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-tehranS06/anat/sub-tehranS06_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:49" + "Date": "2022-10-22 14:36:49", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-tehranS06/anat/sub-tehranS06_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-tehranS06/anat/sub-tehranS06_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json index e41d6ca48c..f7ba143b31 100644 --- a/derivatives/labels_softseg_bin/sub-tehranS06/anat/sub-tehranS06_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-tehranS06/anat/sub-tehranS06_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:49" + "Date": "2022-10-22 14:36:49", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-tehranS06/anat/sub-tehranS06_space-other_T1w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-tehranS06/anat/sub-tehranS06_space-other_T1w_desc-softseg_label-SC_seg.json index e41d6ca48c..2cac173070 100644 --- a/derivatives/labels_softseg_bin/sub-tehranS06/anat/sub-tehranS06_space-other_T1w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-tehranS06/anat/sub-tehranS06_space-other_T1w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:49" + "Date": "2022-10-22 14:36:49", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-tehranS06/anat/sub-tehranS06_space-other_T2star_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-tehranS06/anat/sub-tehranS06_space-other_T2star_desc-softseg_label-SC_seg.json index e41d6ca48c..9f0eafa81c 100644 --- a/derivatives/labels_softseg_bin/sub-tehranS06/anat/sub-tehranS06_space-other_T2star_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-tehranS06/anat/sub-tehranS06_space-other_T2star_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:49" + "Date": "2022-10-22 14:36:49", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-tehranS06/anat/sub-tehranS06_space-other_T2w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-tehranS06/anat/sub-tehranS06_space-other_T2w_desc-softseg_label-SC_seg.json index e41d6ca48c..285d95dae4 100644 --- a/derivatives/labels_softseg_bin/sub-tehranS06/anat/sub-tehranS06_space-other_T2w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-tehranS06/anat/sub-tehranS06_space-other_T2w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:49" + "Date": "2022-10-22 14:36:49", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-tokyo750w01/anat/sub-tokyo750w01_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-tokyo750w01/anat/sub-tokyo750w01_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json index e41d6ca48c..f7ba143b31 100644 --- a/derivatives/labels_softseg_bin/sub-tokyo750w01/anat/sub-tokyo750w01_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-tokyo750w01/anat/sub-tokyo750w01_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:49" + "Date": "2022-10-22 14:36:49", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-tokyo750w01/anat/sub-tokyo750w01_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-tokyo750w01/anat/sub-tokyo750w01_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json index e41d6ca48c..f7ba143b31 100644 --- a/derivatives/labels_softseg_bin/sub-tokyo750w01/anat/sub-tokyo750w01_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-tokyo750w01/anat/sub-tokyo750w01_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:49" + "Date": "2022-10-22 14:36:49", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-tokyo750w01/anat/sub-tokyo750w01_space-other_T1w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-tokyo750w01/anat/sub-tokyo750w01_space-other_T1w_desc-softseg_label-SC_seg.json index e41d6ca48c..2cac173070 100644 --- a/derivatives/labels_softseg_bin/sub-tokyo750w01/anat/sub-tokyo750w01_space-other_T1w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-tokyo750w01/anat/sub-tokyo750w01_space-other_T1w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:49" + "Date": "2022-10-22 14:36:49", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-tokyo750w01/anat/sub-tokyo750w01_space-other_T2star_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-tokyo750w01/anat/sub-tokyo750w01_space-other_T2star_desc-softseg_label-SC_seg.json index e41d6ca48c..9f0eafa81c 100644 --- a/derivatives/labels_softseg_bin/sub-tokyo750w01/anat/sub-tokyo750w01_space-other_T2star_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-tokyo750w01/anat/sub-tokyo750w01_space-other_T2star_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:49" + "Date": "2022-10-22 14:36:49", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-tokyo750w01/anat/sub-tokyo750w01_space-other_T2w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-tokyo750w01/anat/sub-tokyo750w01_space-other_T2w_desc-softseg_label-SC_seg.json index e41d6ca48c..285d95dae4 100644 --- a/derivatives/labels_softseg_bin/sub-tokyo750w01/anat/sub-tokyo750w01_space-other_T2w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-tokyo750w01/anat/sub-tokyo750w01_space-other_T2w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:49" + "Date": "2022-10-22 14:36:49", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-tokyo750w02/anat/sub-tokyo750w02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-tokyo750w02/anat/sub-tokyo750w02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json index e41d6ca48c..f7ba143b31 100644 --- a/derivatives/labels_softseg_bin/sub-tokyo750w02/anat/sub-tokyo750w02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-tokyo750w02/anat/sub-tokyo750w02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:49" + "Date": "2022-10-22 14:36:49", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-tokyo750w02/anat/sub-tokyo750w02_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-tokyo750w02/anat/sub-tokyo750w02_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json index e41d6ca48c..f7ba143b31 100644 --- a/derivatives/labels_softseg_bin/sub-tokyo750w02/anat/sub-tokyo750w02_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-tokyo750w02/anat/sub-tokyo750w02_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:49" + "Date": "2022-10-22 14:36:49", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-tokyo750w02/anat/sub-tokyo750w02_space-other_T1w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-tokyo750w02/anat/sub-tokyo750w02_space-other_T1w_desc-softseg_label-SC_seg.json index e41d6ca48c..2cac173070 100644 --- a/derivatives/labels_softseg_bin/sub-tokyo750w02/anat/sub-tokyo750w02_space-other_T1w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-tokyo750w02/anat/sub-tokyo750w02_space-other_T1w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:49" + "Date": "2022-10-22 14:36:49", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-tokyo750w02/anat/sub-tokyo750w02_space-other_T2star_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-tokyo750w02/anat/sub-tokyo750w02_space-other_T2star_desc-softseg_label-SC_seg.json index e41d6ca48c..9f0eafa81c 100644 --- a/derivatives/labels_softseg_bin/sub-tokyo750w02/anat/sub-tokyo750w02_space-other_T2star_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-tokyo750w02/anat/sub-tokyo750w02_space-other_T2star_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:49" + "Date": "2022-10-22 14:36:49", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-tokyo750w02/anat/sub-tokyo750w02_space-other_T2w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-tokyo750w02/anat/sub-tokyo750w02_space-other_T2w_desc-softseg_label-SC_seg.json index e41d6ca48c..285d95dae4 100644 --- a/derivatives/labels_softseg_bin/sub-tokyo750w02/anat/sub-tokyo750w02_space-other_T2w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-tokyo750w02/anat/sub-tokyo750w02_space-other_T2w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:49" + "Date": "2022-10-22 14:36:49", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-tokyo750w03/anat/sub-tokyo750w03_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-tokyo750w03/anat/sub-tokyo750w03_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json index bf02a0dd72..0efb6e8a6b 100644 --- a/derivatives/labels_softseg_bin/sub-tokyo750w03/anat/sub-tokyo750w03_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-tokyo750w03/anat/sub-tokyo750w03_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:50" + "Date": "2022-10-22 14:36:50", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-tokyo750w03/anat/sub-tokyo750w03_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-tokyo750w03/anat/sub-tokyo750w03_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json index bf02a0dd72..0efb6e8a6b 100644 --- a/derivatives/labels_softseg_bin/sub-tokyo750w03/anat/sub-tokyo750w03_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-tokyo750w03/anat/sub-tokyo750w03_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:50" + "Date": "2022-10-22 14:36:50", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-tokyo750w03/anat/sub-tokyo750w03_space-other_T1w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-tokyo750w03/anat/sub-tokyo750w03_space-other_T1w_desc-softseg_label-SC_seg.json index bf02a0dd72..54129a95b3 100644 --- a/derivatives/labels_softseg_bin/sub-tokyo750w03/anat/sub-tokyo750w03_space-other_T1w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-tokyo750w03/anat/sub-tokyo750w03_space-other_T1w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:50" + "Date": "2022-10-22 14:36:50", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-tokyo750w03/anat/sub-tokyo750w03_space-other_T2star_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-tokyo750w03/anat/sub-tokyo750w03_space-other_T2star_desc-softseg_label-SC_seg.json index bf02a0dd72..602d9bb4a2 100644 --- a/derivatives/labels_softseg_bin/sub-tokyo750w03/anat/sub-tokyo750w03_space-other_T2star_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-tokyo750w03/anat/sub-tokyo750w03_space-other_T2star_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:50" + "Date": "2022-10-22 14:36:50", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-tokyo750w03/anat/sub-tokyo750w03_space-other_T2w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-tokyo750w03/anat/sub-tokyo750w03_space-other_T2w_desc-softseg_label-SC_seg.json index bf02a0dd72..e78a264c2d 100644 --- a/derivatives/labels_softseg_bin/sub-tokyo750w03/anat/sub-tokyo750w03_space-other_T2w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-tokyo750w03/anat/sub-tokyo750w03_space-other_T2w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:50" + "Date": "2022-10-22 14:36:50", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-tokyo750w04/anat/sub-tokyo750w04_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-tokyo750w04/anat/sub-tokyo750w04_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json index bf02a0dd72..0efb6e8a6b 100644 --- a/derivatives/labels_softseg_bin/sub-tokyo750w04/anat/sub-tokyo750w04_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-tokyo750w04/anat/sub-tokyo750w04_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:50" + "Date": "2022-10-22 14:36:50", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-tokyo750w04/anat/sub-tokyo750w04_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-tokyo750w04/anat/sub-tokyo750w04_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json index bf02a0dd72..0efb6e8a6b 100644 --- a/derivatives/labels_softseg_bin/sub-tokyo750w04/anat/sub-tokyo750w04_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-tokyo750w04/anat/sub-tokyo750w04_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:50" + "Date": "2022-10-22 14:36:50", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-tokyo750w04/anat/sub-tokyo750w04_space-other_T1w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-tokyo750w04/anat/sub-tokyo750w04_space-other_T1w_desc-softseg_label-SC_seg.json index bf02a0dd72..54129a95b3 100644 --- a/derivatives/labels_softseg_bin/sub-tokyo750w04/anat/sub-tokyo750w04_space-other_T1w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-tokyo750w04/anat/sub-tokyo750w04_space-other_T1w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:50" + "Date": "2022-10-22 14:36:50", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-tokyo750w04/anat/sub-tokyo750w04_space-other_T2star_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-tokyo750w04/anat/sub-tokyo750w04_space-other_T2star_desc-softseg_label-SC_seg.json index bf02a0dd72..602d9bb4a2 100644 --- a/derivatives/labels_softseg_bin/sub-tokyo750w04/anat/sub-tokyo750w04_space-other_T2star_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-tokyo750w04/anat/sub-tokyo750w04_space-other_T2star_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:50" + "Date": "2022-10-22 14:36:50", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-tokyo750w04/anat/sub-tokyo750w04_space-other_T2w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-tokyo750w04/anat/sub-tokyo750w04_space-other_T2w_desc-softseg_label-SC_seg.json index bf02a0dd72..e78a264c2d 100644 --- a/derivatives/labels_softseg_bin/sub-tokyo750w04/anat/sub-tokyo750w04_space-other_T2w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-tokyo750w04/anat/sub-tokyo750w04_space-other_T2w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:50" + "Date": "2022-10-22 14:36:50", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-tokyo750w05/anat/sub-tokyo750w05_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-tokyo750w05/anat/sub-tokyo750w05_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json index bf02a0dd72..0efb6e8a6b 100644 --- a/derivatives/labels_softseg_bin/sub-tokyo750w05/anat/sub-tokyo750w05_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-tokyo750w05/anat/sub-tokyo750w05_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:50" + "Date": "2022-10-22 14:36:50", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-tokyo750w05/anat/sub-tokyo750w05_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-tokyo750w05/anat/sub-tokyo750w05_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json index bf02a0dd72..0efb6e8a6b 100644 --- a/derivatives/labels_softseg_bin/sub-tokyo750w05/anat/sub-tokyo750w05_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-tokyo750w05/anat/sub-tokyo750w05_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:50" + "Date": "2022-10-22 14:36:50", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-tokyo750w05/anat/sub-tokyo750w05_space-other_T1w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-tokyo750w05/anat/sub-tokyo750w05_space-other_T1w_desc-softseg_label-SC_seg.json index bf02a0dd72..54129a95b3 100644 --- a/derivatives/labels_softseg_bin/sub-tokyo750w05/anat/sub-tokyo750w05_space-other_T1w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-tokyo750w05/anat/sub-tokyo750w05_space-other_T1w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:50" + "Date": "2022-10-22 14:36:50", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-tokyo750w05/anat/sub-tokyo750w05_space-other_T2star_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-tokyo750w05/anat/sub-tokyo750w05_space-other_T2star_desc-softseg_label-SC_seg.json index bf02a0dd72..602d9bb4a2 100644 --- a/derivatives/labels_softseg_bin/sub-tokyo750w05/anat/sub-tokyo750w05_space-other_T2star_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-tokyo750w05/anat/sub-tokyo750w05_space-other_T2star_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:50" + "Date": "2022-10-22 14:36:50", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-tokyo750w05/anat/sub-tokyo750w05_space-other_T2w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-tokyo750w05/anat/sub-tokyo750w05_space-other_T2w_desc-softseg_label-SC_seg.json index bf02a0dd72..e78a264c2d 100644 --- a/derivatives/labels_softseg_bin/sub-tokyo750w05/anat/sub-tokyo750w05_space-other_T2w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-tokyo750w05/anat/sub-tokyo750w05_space-other_T2w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:50" + "Date": "2022-10-22 14:36:50", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-tokyo750w06/anat/sub-tokyo750w06_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-tokyo750w06/anat/sub-tokyo750w06_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json index bf02a0dd72..0efb6e8a6b 100644 --- a/derivatives/labels_softseg_bin/sub-tokyo750w06/anat/sub-tokyo750w06_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-tokyo750w06/anat/sub-tokyo750w06_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:50" + "Date": "2022-10-22 14:36:50", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-tokyo750w06/anat/sub-tokyo750w06_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-tokyo750w06/anat/sub-tokyo750w06_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json index bf02a0dd72..0efb6e8a6b 100644 --- a/derivatives/labels_softseg_bin/sub-tokyo750w06/anat/sub-tokyo750w06_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-tokyo750w06/anat/sub-tokyo750w06_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:50" + "Date": "2022-10-22 14:36:50", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-tokyo750w06/anat/sub-tokyo750w06_space-other_T1w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-tokyo750w06/anat/sub-tokyo750w06_space-other_T1w_desc-softseg_label-SC_seg.json index bf02a0dd72..54129a95b3 100644 --- a/derivatives/labels_softseg_bin/sub-tokyo750w06/anat/sub-tokyo750w06_space-other_T1w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-tokyo750w06/anat/sub-tokyo750w06_space-other_T1w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:50" + "Date": "2022-10-22 14:36:50", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-tokyo750w06/anat/sub-tokyo750w06_space-other_T2star_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-tokyo750w06/anat/sub-tokyo750w06_space-other_T2star_desc-softseg_label-SC_seg.json index bf02a0dd72..602d9bb4a2 100644 --- a/derivatives/labels_softseg_bin/sub-tokyo750w06/anat/sub-tokyo750w06_space-other_T2star_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-tokyo750w06/anat/sub-tokyo750w06_space-other_T2star_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:50" + "Date": "2022-10-22 14:36:50", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-tokyo750w06/anat/sub-tokyo750w06_space-other_T2w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-tokyo750w06/anat/sub-tokyo750w06_space-other_T2w_desc-softseg_label-SC_seg.json index bf02a0dd72..e78a264c2d 100644 --- a/derivatives/labels_softseg_bin/sub-tokyo750w06/anat/sub-tokyo750w06_space-other_T2w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-tokyo750w06/anat/sub-tokyo750w06_space-other_T2w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:50" + "Date": "2022-10-22 14:36:50", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-tokyo750w07/anat/sub-tokyo750w07_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-tokyo750w07/anat/sub-tokyo750w07_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json index e6b3b129d6..3b55b7d18b 100644 --- a/derivatives/labels_softseg_bin/sub-tokyo750w07/anat/sub-tokyo750w07_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-tokyo750w07/anat/sub-tokyo750w07_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:51" + "Date": "2022-10-22 14:36:51", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-tokyo750w07/anat/sub-tokyo750w07_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-tokyo750w07/anat/sub-tokyo750w07_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json index e6b3b129d6..3b55b7d18b 100644 --- a/derivatives/labels_softseg_bin/sub-tokyo750w07/anat/sub-tokyo750w07_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-tokyo750w07/anat/sub-tokyo750w07_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:51" + "Date": "2022-10-22 14:36:51", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-tokyo750w07/anat/sub-tokyo750w07_space-other_T1w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-tokyo750w07/anat/sub-tokyo750w07_space-other_T1w_desc-softseg_label-SC_seg.json index e6b3b129d6..6bdc0d9940 100644 --- a/derivatives/labels_softseg_bin/sub-tokyo750w07/anat/sub-tokyo750w07_space-other_T1w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-tokyo750w07/anat/sub-tokyo750w07_space-other_T1w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:51" + "Date": "2022-10-22 14:36:51", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-tokyo750w07/anat/sub-tokyo750w07_space-other_T2star_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-tokyo750w07/anat/sub-tokyo750w07_space-other_T2star_desc-softseg_label-SC_seg.json index e6b3b129d6..d636a1474c 100644 --- a/derivatives/labels_softseg_bin/sub-tokyo750w07/anat/sub-tokyo750w07_space-other_T2star_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-tokyo750w07/anat/sub-tokyo750w07_space-other_T2star_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:51" + "Date": "2022-10-22 14:36:51", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-tokyo750w07/anat/sub-tokyo750w07_space-other_T2w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-tokyo750w07/anat/sub-tokyo750w07_space-other_T2w_desc-softseg_label-SC_seg.json index e6b3b129d6..6460bdaaec 100644 --- a/derivatives/labels_softseg_bin/sub-tokyo750w07/anat/sub-tokyo750w07_space-other_T2w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-tokyo750w07/anat/sub-tokyo750w07_space-other_T2w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:51" + "Date": "2022-10-22 14:36:51", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-tokyoIngenia01/anat/sub-tokyoIngenia01_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-tokyoIngenia01/anat/sub-tokyoIngenia01_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json index e6b3b129d6..3b55b7d18b 100644 --- a/derivatives/labels_softseg_bin/sub-tokyoIngenia01/anat/sub-tokyoIngenia01_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-tokyoIngenia01/anat/sub-tokyoIngenia01_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:51" + "Date": "2022-10-22 14:36:51", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-tokyoIngenia01/anat/sub-tokyoIngenia01_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-tokyoIngenia01/anat/sub-tokyoIngenia01_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json index e6b3b129d6..3b55b7d18b 100644 --- a/derivatives/labels_softseg_bin/sub-tokyoIngenia01/anat/sub-tokyoIngenia01_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-tokyoIngenia01/anat/sub-tokyoIngenia01_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:51" + "Date": "2022-10-22 14:36:51", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-tokyoIngenia01/anat/sub-tokyoIngenia01_space-other_T1w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-tokyoIngenia01/anat/sub-tokyoIngenia01_space-other_T1w_desc-softseg_label-SC_seg.json index e6b3b129d6..6bdc0d9940 100644 --- a/derivatives/labels_softseg_bin/sub-tokyoIngenia01/anat/sub-tokyoIngenia01_space-other_T1w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-tokyoIngenia01/anat/sub-tokyoIngenia01_space-other_T1w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:51" + "Date": "2022-10-22 14:36:51", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-tokyoIngenia01/anat/sub-tokyoIngenia01_space-other_T2star_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-tokyoIngenia01/anat/sub-tokyoIngenia01_space-other_T2star_desc-softseg_label-SC_seg.json index e6b3b129d6..d636a1474c 100644 --- a/derivatives/labels_softseg_bin/sub-tokyoIngenia01/anat/sub-tokyoIngenia01_space-other_T2star_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-tokyoIngenia01/anat/sub-tokyoIngenia01_space-other_T2star_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:51" + "Date": "2022-10-22 14:36:51", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-tokyoIngenia01/anat/sub-tokyoIngenia01_space-other_T2w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-tokyoIngenia01/anat/sub-tokyoIngenia01_space-other_T2w_desc-softseg_label-SC_seg.json index e6b3b129d6..6460bdaaec 100644 --- a/derivatives/labels_softseg_bin/sub-tokyoIngenia01/anat/sub-tokyoIngenia01_space-other_T2w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-tokyoIngenia01/anat/sub-tokyoIngenia01_space-other_T2w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:51" + "Date": "2022-10-22 14:36:51", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-tokyoIngenia02/anat/sub-tokyoIngenia02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-tokyoIngenia02/anat/sub-tokyoIngenia02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json index e6b3b129d6..3b55b7d18b 100644 --- a/derivatives/labels_softseg_bin/sub-tokyoIngenia02/anat/sub-tokyoIngenia02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-tokyoIngenia02/anat/sub-tokyoIngenia02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:51" + "Date": "2022-10-22 14:36:51", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-tokyoIngenia02/anat/sub-tokyoIngenia02_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-tokyoIngenia02/anat/sub-tokyoIngenia02_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json index e6b3b129d6..3b55b7d18b 100644 --- a/derivatives/labels_softseg_bin/sub-tokyoIngenia02/anat/sub-tokyoIngenia02_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-tokyoIngenia02/anat/sub-tokyoIngenia02_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:51" + "Date": "2022-10-22 14:36:51", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-tokyoIngenia02/anat/sub-tokyoIngenia02_space-other_T1w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-tokyoIngenia02/anat/sub-tokyoIngenia02_space-other_T1w_desc-softseg_label-SC_seg.json index e6b3b129d6..6bdc0d9940 100644 --- a/derivatives/labels_softseg_bin/sub-tokyoIngenia02/anat/sub-tokyoIngenia02_space-other_T1w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-tokyoIngenia02/anat/sub-tokyoIngenia02_space-other_T1w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:51" + "Date": "2022-10-22 14:36:51", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-tokyoIngenia02/anat/sub-tokyoIngenia02_space-other_T2star_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-tokyoIngenia02/anat/sub-tokyoIngenia02_space-other_T2star_desc-softseg_label-SC_seg.json index e6b3b129d6..d636a1474c 100644 --- a/derivatives/labels_softseg_bin/sub-tokyoIngenia02/anat/sub-tokyoIngenia02_space-other_T2star_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-tokyoIngenia02/anat/sub-tokyoIngenia02_space-other_T2star_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:51" + "Date": "2022-10-22 14:36:51", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-tokyoIngenia02/anat/sub-tokyoIngenia02_space-other_T2w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-tokyoIngenia02/anat/sub-tokyoIngenia02_space-other_T2w_desc-softseg_label-SC_seg.json index e6b3b129d6..6460bdaaec 100644 --- a/derivatives/labels_softseg_bin/sub-tokyoIngenia02/anat/sub-tokyoIngenia02_space-other_T2w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-tokyoIngenia02/anat/sub-tokyoIngenia02_space-other_T2w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:51" + "Date": "2022-10-22 14:36:51", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-tokyoIngenia03/anat/sub-tokyoIngenia03_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-tokyoIngenia03/anat/sub-tokyoIngenia03_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json index e6b3b129d6..3b55b7d18b 100644 --- a/derivatives/labels_softseg_bin/sub-tokyoIngenia03/anat/sub-tokyoIngenia03_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-tokyoIngenia03/anat/sub-tokyoIngenia03_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:51" + "Date": "2022-10-22 14:36:51", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-tokyoIngenia03/anat/sub-tokyoIngenia03_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-tokyoIngenia03/anat/sub-tokyoIngenia03_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json index e6b3b129d6..3b55b7d18b 100644 --- a/derivatives/labels_softseg_bin/sub-tokyoIngenia03/anat/sub-tokyoIngenia03_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-tokyoIngenia03/anat/sub-tokyoIngenia03_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:51" + "Date": "2022-10-22 14:36:51", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-tokyoIngenia03/anat/sub-tokyoIngenia03_space-other_T1w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-tokyoIngenia03/anat/sub-tokyoIngenia03_space-other_T1w_desc-softseg_label-SC_seg.json index e6b3b129d6..6bdc0d9940 100644 --- a/derivatives/labels_softseg_bin/sub-tokyoIngenia03/anat/sub-tokyoIngenia03_space-other_T1w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-tokyoIngenia03/anat/sub-tokyoIngenia03_space-other_T1w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:51" + "Date": "2022-10-22 14:36:51", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-tokyoIngenia03/anat/sub-tokyoIngenia03_space-other_T2star_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-tokyoIngenia03/anat/sub-tokyoIngenia03_space-other_T2star_desc-softseg_label-SC_seg.json index e6b3b129d6..d636a1474c 100644 --- a/derivatives/labels_softseg_bin/sub-tokyoIngenia03/anat/sub-tokyoIngenia03_space-other_T2star_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-tokyoIngenia03/anat/sub-tokyoIngenia03_space-other_T2star_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:51" + "Date": "2022-10-22 14:36:51", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-tokyoIngenia03/anat/sub-tokyoIngenia03_space-other_T2w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-tokyoIngenia03/anat/sub-tokyoIngenia03_space-other_T2w_desc-softseg_label-SC_seg.json index dedf7bd0ad..8b7354713a 100644 --- a/derivatives/labels_softseg_bin/sub-tokyoIngenia03/anat/sub-tokyoIngenia03_space-other_T2w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-tokyoIngenia03/anat/sub-tokyoIngenia03_space-other_T2w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:52" + "Date": "2022-10-22 14:36:52", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-tokyoIngenia04/anat/sub-tokyoIngenia04_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-tokyoIngenia04/anat/sub-tokyoIngenia04_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json index dedf7bd0ad..48489dce3d 100644 --- a/derivatives/labels_softseg_bin/sub-tokyoIngenia04/anat/sub-tokyoIngenia04_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-tokyoIngenia04/anat/sub-tokyoIngenia04_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:52" + "Date": "2022-10-22 14:36:52", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-tokyoIngenia04/anat/sub-tokyoIngenia04_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-tokyoIngenia04/anat/sub-tokyoIngenia04_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json index dedf7bd0ad..48489dce3d 100644 --- a/derivatives/labels_softseg_bin/sub-tokyoIngenia04/anat/sub-tokyoIngenia04_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-tokyoIngenia04/anat/sub-tokyoIngenia04_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:52" + "Date": "2022-10-22 14:36:52", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-tokyoIngenia04/anat/sub-tokyoIngenia04_space-other_T1w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-tokyoIngenia04/anat/sub-tokyoIngenia04_space-other_T1w_desc-softseg_label-SC_seg.json index dedf7bd0ad..67f6f58f3b 100644 --- a/derivatives/labels_softseg_bin/sub-tokyoIngenia04/anat/sub-tokyoIngenia04_space-other_T1w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-tokyoIngenia04/anat/sub-tokyoIngenia04_space-other_T1w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:52" + "Date": "2022-10-22 14:36:52", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-tokyoIngenia04/anat/sub-tokyoIngenia04_space-other_T2star_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-tokyoIngenia04/anat/sub-tokyoIngenia04_space-other_T2star_desc-softseg_label-SC_seg.json index dedf7bd0ad..b745d8b1eb 100644 --- a/derivatives/labels_softseg_bin/sub-tokyoIngenia04/anat/sub-tokyoIngenia04_space-other_T2star_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-tokyoIngenia04/anat/sub-tokyoIngenia04_space-other_T2star_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:52" + "Date": "2022-10-22 14:36:52", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-tokyoIngenia04/anat/sub-tokyoIngenia04_space-other_T2w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-tokyoIngenia04/anat/sub-tokyoIngenia04_space-other_T2w_desc-softseg_label-SC_seg.json index dedf7bd0ad..8b7354713a 100644 --- a/derivatives/labels_softseg_bin/sub-tokyoIngenia04/anat/sub-tokyoIngenia04_space-other_T2w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-tokyoIngenia04/anat/sub-tokyoIngenia04_space-other_T2w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:52" + "Date": "2022-10-22 14:36:52", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-tokyoIngenia05/anat/sub-tokyoIngenia05_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-tokyoIngenia05/anat/sub-tokyoIngenia05_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json index dedf7bd0ad..48489dce3d 100644 --- a/derivatives/labels_softseg_bin/sub-tokyoIngenia05/anat/sub-tokyoIngenia05_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-tokyoIngenia05/anat/sub-tokyoIngenia05_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:52" + "Date": "2022-10-22 14:36:52", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-tokyoIngenia05/anat/sub-tokyoIngenia05_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-tokyoIngenia05/anat/sub-tokyoIngenia05_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json index dedf7bd0ad..48489dce3d 100644 --- a/derivatives/labels_softseg_bin/sub-tokyoIngenia05/anat/sub-tokyoIngenia05_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-tokyoIngenia05/anat/sub-tokyoIngenia05_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:52" + "Date": "2022-10-22 14:36:52", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-tokyoIngenia05/anat/sub-tokyoIngenia05_space-other_T1w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-tokyoIngenia05/anat/sub-tokyoIngenia05_space-other_T1w_desc-softseg_label-SC_seg.json index dedf7bd0ad..67f6f58f3b 100644 --- a/derivatives/labels_softseg_bin/sub-tokyoIngenia05/anat/sub-tokyoIngenia05_space-other_T1w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-tokyoIngenia05/anat/sub-tokyoIngenia05_space-other_T1w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:52" + "Date": "2022-10-22 14:36:52", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-tokyoIngenia05/anat/sub-tokyoIngenia05_space-other_T2star_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-tokyoIngenia05/anat/sub-tokyoIngenia05_space-other_T2star_desc-softseg_label-SC_seg.json index dedf7bd0ad..b745d8b1eb 100644 --- a/derivatives/labels_softseg_bin/sub-tokyoIngenia05/anat/sub-tokyoIngenia05_space-other_T2star_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-tokyoIngenia05/anat/sub-tokyoIngenia05_space-other_T2star_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:52" + "Date": "2022-10-22 14:36:52", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-tokyoIngenia05/anat/sub-tokyoIngenia05_space-other_T2w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-tokyoIngenia05/anat/sub-tokyoIngenia05_space-other_T2w_desc-softseg_label-SC_seg.json index dedf7bd0ad..8b7354713a 100644 --- a/derivatives/labels_softseg_bin/sub-tokyoIngenia05/anat/sub-tokyoIngenia05_space-other_T2w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-tokyoIngenia05/anat/sub-tokyoIngenia05_space-other_T2w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:52" + "Date": "2022-10-22 14:36:52", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-tokyoIngenia06/anat/sub-tokyoIngenia06_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-tokyoIngenia06/anat/sub-tokyoIngenia06_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json index dedf7bd0ad..48489dce3d 100644 --- a/derivatives/labels_softseg_bin/sub-tokyoIngenia06/anat/sub-tokyoIngenia06_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-tokyoIngenia06/anat/sub-tokyoIngenia06_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:52" + "Date": "2022-10-22 14:36:52", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-tokyoIngenia06/anat/sub-tokyoIngenia06_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-tokyoIngenia06/anat/sub-tokyoIngenia06_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json index dedf7bd0ad..48489dce3d 100644 --- a/derivatives/labels_softseg_bin/sub-tokyoIngenia06/anat/sub-tokyoIngenia06_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-tokyoIngenia06/anat/sub-tokyoIngenia06_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:52" + "Date": "2022-10-22 14:36:52", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-tokyoIngenia06/anat/sub-tokyoIngenia06_space-other_T1w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-tokyoIngenia06/anat/sub-tokyoIngenia06_space-other_T1w_desc-softseg_label-SC_seg.json index dedf7bd0ad..67f6f58f3b 100644 --- a/derivatives/labels_softseg_bin/sub-tokyoIngenia06/anat/sub-tokyoIngenia06_space-other_T1w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-tokyoIngenia06/anat/sub-tokyoIngenia06_space-other_T1w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:52" + "Date": "2022-10-22 14:36:52", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-tokyoIngenia06/anat/sub-tokyoIngenia06_space-other_T2star_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-tokyoIngenia06/anat/sub-tokyoIngenia06_space-other_T2star_desc-softseg_label-SC_seg.json index dedf7bd0ad..b745d8b1eb 100644 --- a/derivatives/labels_softseg_bin/sub-tokyoIngenia06/anat/sub-tokyoIngenia06_space-other_T2star_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-tokyoIngenia06/anat/sub-tokyoIngenia06_space-other_T2star_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:52" + "Date": "2022-10-22 14:36:52", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-tokyoIngenia06/anat/sub-tokyoIngenia06_space-other_T2w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-tokyoIngenia06/anat/sub-tokyoIngenia06_space-other_T2w_desc-softseg_label-SC_seg.json index dedf7bd0ad..8b7354713a 100644 --- a/derivatives/labels_softseg_bin/sub-tokyoIngenia06/anat/sub-tokyoIngenia06_space-other_T2w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-tokyoIngenia06/anat/sub-tokyoIngenia06_space-other_T2w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:52" + "Date": "2022-10-22 14:36:52", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-tokyoIngenia07/anat/sub-tokyoIngenia07_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-tokyoIngenia07/anat/sub-tokyoIngenia07_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json index dedf7bd0ad..48489dce3d 100644 --- a/derivatives/labels_softseg_bin/sub-tokyoIngenia07/anat/sub-tokyoIngenia07_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-tokyoIngenia07/anat/sub-tokyoIngenia07_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:52" + "Date": "2022-10-22 14:36:52", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-tokyoIngenia07/anat/sub-tokyoIngenia07_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-tokyoIngenia07/anat/sub-tokyoIngenia07_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json index dedf7bd0ad..48489dce3d 100644 --- a/derivatives/labels_softseg_bin/sub-tokyoIngenia07/anat/sub-tokyoIngenia07_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-tokyoIngenia07/anat/sub-tokyoIngenia07_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:52" + "Date": "2022-10-22 14:36:52", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-tokyoIngenia07/anat/sub-tokyoIngenia07_space-other_T1w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-tokyoIngenia07/anat/sub-tokyoIngenia07_space-other_T1w_desc-softseg_label-SC_seg.json index dedf7bd0ad..67f6f58f3b 100644 --- a/derivatives/labels_softseg_bin/sub-tokyoIngenia07/anat/sub-tokyoIngenia07_space-other_T1w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-tokyoIngenia07/anat/sub-tokyoIngenia07_space-other_T1w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:52" + "Date": "2022-10-22 14:36:52", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-tokyoIngenia07/anat/sub-tokyoIngenia07_space-other_T2star_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-tokyoIngenia07/anat/sub-tokyoIngenia07_space-other_T2star_desc-softseg_label-SC_seg.json index dedf7bd0ad..b745d8b1eb 100644 --- a/derivatives/labels_softseg_bin/sub-tokyoIngenia07/anat/sub-tokyoIngenia07_space-other_T2star_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-tokyoIngenia07/anat/sub-tokyoIngenia07_space-other_T2star_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:52" + "Date": "2022-10-22 14:36:52", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-tokyoIngenia07/anat/sub-tokyoIngenia07_space-other_T2w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-tokyoIngenia07/anat/sub-tokyoIngenia07_space-other_T2w_desc-softseg_label-SC_seg.json index dedf7bd0ad..8b7354713a 100644 --- a/derivatives/labels_softseg_bin/sub-tokyoIngenia07/anat/sub-tokyoIngenia07_space-other_T2w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-tokyoIngenia07/anat/sub-tokyoIngenia07_space-other_T2w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:52" + "Date": "2022-10-22 14:36:52", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-tokyoSkyra01/anat/sub-tokyoSkyra01_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-tokyoSkyra01/anat/sub-tokyoSkyra01_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json index dedf7bd0ad..48489dce3d 100644 --- a/derivatives/labels_softseg_bin/sub-tokyoSkyra01/anat/sub-tokyoSkyra01_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-tokyoSkyra01/anat/sub-tokyoSkyra01_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:52" + "Date": "2022-10-22 14:36:52", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-tokyoSkyra01/anat/sub-tokyoSkyra01_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-tokyoSkyra01/anat/sub-tokyoSkyra01_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json index dedf7bd0ad..48489dce3d 100644 --- a/derivatives/labels_softseg_bin/sub-tokyoSkyra01/anat/sub-tokyoSkyra01_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-tokyoSkyra01/anat/sub-tokyoSkyra01_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:52" + "Date": "2022-10-22 14:36:52", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-tokyoSkyra01/anat/sub-tokyoSkyra01_space-other_T1w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-tokyoSkyra01/anat/sub-tokyoSkyra01_space-other_T1w_desc-softseg_label-SC_seg.json index b0a851e561..1d4a3b31e9 100644 --- a/derivatives/labels_softseg_bin/sub-tokyoSkyra01/anat/sub-tokyoSkyra01_space-other_T1w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-tokyoSkyra01/anat/sub-tokyoSkyra01_space-other_T1w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:53" + "Date": "2022-10-22 14:36:53", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-tokyoSkyra01/anat/sub-tokyoSkyra01_space-other_T2star_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-tokyoSkyra01/anat/sub-tokyoSkyra01_space-other_T2star_desc-softseg_label-SC_seg.json index b0a851e561..f6e9b6929a 100644 --- a/derivatives/labels_softseg_bin/sub-tokyoSkyra01/anat/sub-tokyoSkyra01_space-other_T2star_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-tokyoSkyra01/anat/sub-tokyoSkyra01_space-other_T2star_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:53" + "Date": "2022-10-22 14:36:53", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-tokyoSkyra01/anat/sub-tokyoSkyra01_space-other_T2w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-tokyoSkyra01/anat/sub-tokyoSkyra01_space-other_T2w_desc-softseg_label-SC_seg.json index b0a851e561..076518ac94 100644 --- a/derivatives/labels_softseg_bin/sub-tokyoSkyra01/anat/sub-tokyoSkyra01_space-other_T2w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-tokyoSkyra01/anat/sub-tokyoSkyra01_space-other_T2w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:53" + "Date": "2022-10-22 14:36:53", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-tokyoSkyra02/anat/sub-tokyoSkyra02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-tokyoSkyra02/anat/sub-tokyoSkyra02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json index b0a851e561..79ea89d4f7 100644 --- a/derivatives/labels_softseg_bin/sub-tokyoSkyra02/anat/sub-tokyoSkyra02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-tokyoSkyra02/anat/sub-tokyoSkyra02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:53" + "Date": "2022-10-22 14:36:53", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-tokyoSkyra02/anat/sub-tokyoSkyra02_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-tokyoSkyra02/anat/sub-tokyoSkyra02_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json index b0a851e561..79ea89d4f7 100644 --- a/derivatives/labels_softseg_bin/sub-tokyoSkyra02/anat/sub-tokyoSkyra02_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-tokyoSkyra02/anat/sub-tokyoSkyra02_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:53" + "Date": "2022-10-22 14:36:53", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-tokyoSkyra02/anat/sub-tokyoSkyra02_space-other_T1w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-tokyoSkyra02/anat/sub-tokyoSkyra02_space-other_T1w_desc-softseg_label-SC_seg.json index b0a851e561..1d4a3b31e9 100644 --- a/derivatives/labels_softseg_bin/sub-tokyoSkyra02/anat/sub-tokyoSkyra02_space-other_T1w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-tokyoSkyra02/anat/sub-tokyoSkyra02_space-other_T1w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:53" + "Date": "2022-10-22 14:36:53", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-tokyoSkyra02/anat/sub-tokyoSkyra02_space-other_T2star_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-tokyoSkyra02/anat/sub-tokyoSkyra02_space-other_T2star_desc-softseg_label-SC_seg.json index b0a851e561..f6e9b6929a 100644 --- a/derivatives/labels_softseg_bin/sub-tokyoSkyra02/anat/sub-tokyoSkyra02_space-other_T2star_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-tokyoSkyra02/anat/sub-tokyoSkyra02_space-other_T2star_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:53" + "Date": "2022-10-22 14:36:53", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-tokyoSkyra02/anat/sub-tokyoSkyra02_space-other_T2w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-tokyoSkyra02/anat/sub-tokyoSkyra02_space-other_T2w_desc-softseg_label-SC_seg.json index b0a851e561..076518ac94 100644 --- a/derivatives/labels_softseg_bin/sub-tokyoSkyra02/anat/sub-tokyoSkyra02_space-other_T2w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-tokyoSkyra02/anat/sub-tokyoSkyra02_space-other_T2w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:53" + "Date": "2022-10-22 14:36:53", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-tokyoSkyra03/anat/sub-tokyoSkyra03_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-tokyoSkyra03/anat/sub-tokyoSkyra03_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json index b0a851e561..79ea89d4f7 100644 --- a/derivatives/labels_softseg_bin/sub-tokyoSkyra03/anat/sub-tokyoSkyra03_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-tokyoSkyra03/anat/sub-tokyoSkyra03_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:53" + "Date": "2022-10-22 14:36:53", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-tokyoSkyra03/anat/sub-tokyoSkyra03_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-tokyoSkyra03/anat/sub-tokyoSkyra03_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json index b0a851e561..79ea89d4f7 100644 --- a/derivatives/labels_softseg_bin/sub-tokyoSkyra03/anat/sub-tokyoSkyra03_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-tokyoSkyra03/anat/sub-tokyoSkyra03_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:53" + "Date": "2022-10-22 14:36:53", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-tokyoSkyra03/anat/sub-tokyoSkyra03_space-other_T1w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-tokyoSkyra03/anat/sub-tokyoSkyra03_space-other_T1w_desc-softseg_label-SC_seg.json index b0a851e561..1d4a3b31e9 100644 --- a/derivatives/labels_softseg_bin/sub-tokyoSkyra03/anat/sub-tokyoSkyra03_space-other_T1w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-tokyoSkyra03/anat/sub-tokyoSkyra03_space-other_T1w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:53" + "Date": "2022-10-22 14:36:53", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-tokyoSkyra03/anat/sub-tokyoSkyra03_space-other_T2star_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-tokyoSkyra03/anat/sub-tokyoSkyra03_space-other_T2star_desc-softseg_label-SC_seg.json index b0a851e561..f6e9b6929a 100644 --- a/derivatives/labels_softseg_bin/sub-tokyoSkyra03/anat/sub-tokyoSkyra03_space-other_T2star_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-tokyoSkyra03/anat/sub-tokyoSkyra03_space-other_T2star_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:53" + "Date": "2022-10-22 14:36:53", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-tokyoSkyra03/anat/sub-tokyoSkyra03_space-other_T2w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-tokyoSkyra03/anat/sub-tokyoSkyra03_space-other_T2w_desc-softseg_label-SC_seg.json index b0a851e561..076518ac94 100644 --- a/derivatives/labels_softseg_bin/sub-tokyoSkyra03/anat/sub-tokyoSkyra03_space-other_T2w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-tokyoSkyra03/anat/sub-tokyoSkyra03_space-other_T2w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:53" + "Date": "2022-10-22 14:36:53", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-tokyoSkyra04/anat/sub-tokyoSkyra04_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-tokyoSkyra04/anat/sub-tokyoSkyra04_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json index b0a851e561..79ea89d4f7 100644 --- a/derivatives/labels_softseg_bin/sub-tokyoSkyra04/anat/sub-tokyoSkyra04_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-tokyoSkyra04/anat/sub-tokyoSkyra04_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:53" + "Date": "2022-10-22 14:36:53", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-tokyoSkyra04/anat/sub-tokyoSkyra04_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-tokyoSkyra04/anat/sub-tokyoSkyra04_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json index b0a851e561..79ea89d4f7 100644 --- a/derivatives/labels_softseg_bin/sub-tokyoSkyra04/anat/sub-tokyoSkyra04_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-tokyoSkyra04/anat/sub-tokyoSkyra04_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:53" + "Date": "2022-10-22 14:36:53", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-tokyoSkyra04/anat/sub-tokyoSkyra04_space-other_T1w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-tokyoSkyra04/anat/sub-tokyoSkyra04_space-other_T1w_desc-softseg_label-SC_seg.json index b0a851e561..1d4a3b31e9 100644 --- a/derivatives/labels_softseg_bin/sub-tokyoSkyra04/anat/sub-tokyoSkyra04_space-other_T1w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-tokyoSkyra04/anat/sub-tokyoSkyra04_space-other_T1w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:53" + "Date": "2022-10-22 14:36:53", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-tokyoSkyra04/anat/sub-tokyoSkyra04_space-other_T2star_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-tokyoSkyra04/anat/sub-tokyoSkyra04_space-other_T2star_desc-softseg_label-SC_seg.json index b0a851e561..f6e9b6929a 100644 --- a/derivatives/labels_softseg_bin/sub-tokyoSkyra04/anat/sub-tokyoSkyra04_space-other_T2star_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-tokyoSkyra04/anat/sub-tokyoSkyra04_space-other_T2star_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:53" + "Date": "2022-10-22 14:36:53", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-tokyoSkyra04/anat/sub-tokyoSkyra04_space-other_T2w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-tokyoSkyra04/anat/sub-tokyoSkyra04_space-other_T2w_desc-softseg_label-SC_seg.json index b0a851e561..076518ac94 100644 --- a/derivatives/labels_softseg_bin/sub-tokyoSkyra04/anat/sub-tokyoSkyra04_space-other_T2w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-tokyoSkyra04/anat/sub-tokyoSkyra04_space-other_T2w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:53" + "Date": "2022-10-22 14:36:53", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-tokyoSkyra05/anat/sub-tokyoSkyra05_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-tokyoSkyra05/anat/sub-tokyoSkyra05_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json index 66beabb179..3728ff0dfa 100644 --- a/derivatives/labels_softseg_bin/sub-tokyoSkyra05/anat/sub-tokyoSkyra05_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-tokyoSkyra05/anat/sub-tokyoSkyra05_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:54" + "Date": "2022-10-22 14:36:54", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-tokyoSkyra05/anat/sub-tokyoSkyra05_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-tokyoSkyra05/anat/sub-tokyoSkyra05_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json index 66beabb179..3728ff0dfa 100644 --- a/derivatives/labels_softseg_bin/sub-tokyoSkyra05/anat/sub-tokyoSkyra05_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-tokyoSkyra05/anat/sub-tokyoSkyra05_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:54" + "Date": "2022-10-22 14:36:54", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-tokyoSkyra05/anat/sub-tokyoSkyra05_space-other_T1w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-tokyoSkyra05/anat/sub-tokyoSkyra05_space-other_T1w_desc-softseg_label-SC_seg.json index 66beabb179..dbfa6648e5 100644 --- a/derivatives/labels_softseg_bin/sub-tokyoSkyra05/anat/sub-tokyoSkyra05_space-other_T1w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-tokyoSkyra05/anat/sub-tokyoSkyra05_space-other_T1w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:54" + "Date": "2022-10-22 14:36:54", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-tokyoSkyra05/anat/sub-tokyoSkyra05_space-other_T2star_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-tokyoSkyra05/anat/sub-tokyoSkyra05_space-other_T2star_desc-softseg_label-SC_seg.json index 66beabb179..c60b53bee3 100644 --- a/derivatives/labels_softseg_bin/sub-tokyoSkyra05/anat/sub-tokyoSkyra05_space-other_T2star_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-tokyoSkyra05/anat/sub-tokyoSkyra05_space-other_T2star_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:54" + "Date": "2022-10-22 14:36:54", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-tokyoSkyra05/anat/sub-tokyoSkyra05_space-other_T2w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-tokyoSkyra05/anat/sub-tokyoSkyra05_space-other_T2w_desc-softseg_label-SC_seg.json index 66beabb179..bbf62dadcd 100644 --- a/derivatives/labels_softseg_bin/sub-tokyoSkyra05/anat/sub-tokyoSkyra05_space-other_T2w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-tokyoSkyra05/anat/sub-tokyoSkyra05_space-other_T2w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:54" + "Date": "2022-10-22 14:36:54", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-tokyoSkyra06/anat/sub-tokyoSkyra06_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-tokyoSkyra06/anat/sub-tokyoSkyra06_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json index 66beabb179..3728ff0dfa 100644 --- a/derivatives/labels_softseg_bin/sub-tokyoSkyra06/anat/sub-tokyoSkyra06_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-tokyoSkyra06/anat/sub-tokyoSkyra06_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:54" + "Date": "2022-10-22 14:36:54", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-tokyoSkyra06/anat/sub-tokyoSkyra06_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-tokyoSkyra06/anat/sub-tokyoSkyra06_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json index 66beabb179..3728ff0dfa 100644 --- a/derivatives/labels_softseg_bin/sub-tokyoSkyra06/anat/sub-tokyoSkyra06_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-tokyoSkyra06/anat/sub-tokyoSkyra06_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:54" + "Date": "2022-10-22 14:36:54", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-tokyoSkyra06/anat/sub-tokyoSkyra06_space-other_T1w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-tokyoSkyra06/anat/sub-tokyoSkyra06_space-other_T1w_desc-softseg_label-SC_seg.json index 66beabb179..dbfa6648e5 100644 --- a/derivatives/labels_softseg_bin/sub-tokyoSkyra06/anat/sub-tokyoSkyra06_space-other_T1w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-tokyoSkyra06/anat/sub-tokyoSkyra06_space-other_T1w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:54" + "Date": "2022-10-22 14:36:54", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-tokyoSkyra06/anat/sub-tokyoSkyra06_space-other_T2star_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-tokyoSkyra06/anat/sub-tokyoSkyra06_space-other_T2star_desc-softseg_label-SC_seg.json index 66beabb179..c60b53bee3 100644 --- a/derivatives/labels_softseg_bin/sub-tokyoSkyra06/anat/sub-tokyoSkyra06_space-other_T2star_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-tokyoSkyra06/anat/sub-tokyoSkyra06_space-other_T2star_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:54" + "Date": "2022-10-22 14:36:54", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-tokyoSkyra06/anat/sub-tokyoSkyra06_space-other_T2w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-tokyoSkyra06/anat/sub-tokyoSkyra06_space-other_T2w_desc-softseg_label-SC_seg.json index 66beabb179..bbf62dadcd 100644 --- a/derivatives/labels_softseg_bin/sub-tokyoSkyra06/anat/sub-tokyoSkyra06_space-other_T2w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-tokyoSkyra06/anat/sub-tokyoSkyra06_space-other_T2w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:54" + "Date": "2022-10-22 14:36:54", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-tokyoSkyra07/anat/sub-tokyoSkyra07_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-tokyoSkyra07/anat/sub-tokyoSkyra07_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json index 66beabb179..3728ff0dfa 100644 --- a/derivatives/labels_softseg_bin/sub-tokyoSkyra07/anat/sub-tokyoSkyra07_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-tokyoSkyra07/anat/sub-tokyoSkyra07_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:54" + "Date": "2022-10-22 14:36:54", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-tokyoSkyra07/anat/sub-tokyoSkyra07_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-tokyoSkyra07/anat/sub-tokyoSkyra07_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json index 66beabb179..3728ff0dfa 100644 --- a/derivatives/labels_softseg_bin/sub-tokyoSkyra07/anat/sub-tokyoSkyra07_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-tokyoSkyra07/anat/sub-tokyoSkyra07_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:54" + "Date": "2022-10-22 14:36:54", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-tokyoSkyra07/anat/sub-tokyoSkyra07_space-other_T1w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-tokyoSkyra07/anat/sub-tokyoSkyra07_space-other_T1w_desc-softseg_label-SC_seg.json index 66beabb179..dbfa6648e5 100644 --- a/derivatives/labels_softseg_bin/sub-tokyoSkyra07/anat/sub-tokyoSkyra07_space-other_T1w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-tokyoSkyra07/anat/sub-tokyoSkyra07_space-other_T1w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:54" + "Date": "2022-10-22 14:36:54", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-tokyoSkyra07/anat/sub-tokyoSkyra07_space-other_T2star_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-tokyoSkyra07/anat/sub-tokyoSkyra07_space-other_T2star_desc-softseg_label-SC_seg.json index 66beabb179..c60b53bee3 100644 --- a/derivatives/labels_softseg_bin/sub-tokyoSkyra07/anat/sub-tokyoSkyra07_space-other_T2star_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-tokyoSkyra07/anat/sub-tokyoSkyra07_space-other_T2star_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:54" + "Date": "2022-10-22 14:36:54", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-tokyoSkyra07/anat/sub-tokyoSkyra07_space-other_T2w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-tokyoSkyra07/anat/sub-tokyoSkyra07_space-other_T2w_desc-softseg_label-SC_seg.json index 66beabb179..bbf62dadcd 100644 --- a/derivatives/labels_softseg_bin/sub-tokyoSkyra07/anat/sub-tokyoSkyra07_space-other_T2w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-tokyoSkyra07/anat/sub-tokyoSkyra07_space-other_T2w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:54" + "Date": "2022-10-22 14:36:54", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-ubc02/anat/sub-ubc02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-ubc02/anat/sub-ubc02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json index 66beabb179..3728ff0dfa 100644 --- a/derivatives/labels_softseg_bin/sub-ubc02/anat/sub-ubc02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-ubc02/anat/sub-ubc02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:54" + "Date": "2022-10-22 14:36:54", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-ubc02/anat/sub-ubc02_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-ubc02/anat/sub-ubc02_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json index 66beabb179..3728ff0dfa 100644 --- a/derivatives/labels_softseg_bin/sub-ubc02/anat/sub-ubc02_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-ubc02/anat/sub-ubc02_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:54" + "Date": "2022-10-22 14:36:54", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-ubc02/anat/sub-ubc02_space-other_T1w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-ubc02/anat/sub-ubc02_space-other_T1w_desc-softseg_label-SC_seg.json index 66beabb179..dbfa6648e5 100644 --- a/derivatives/labels_softseg_bin/sub-ubc02/anat/sub-ubc02_space-other_T1w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-ubc02/anat/sub-ubc02_space-other_T1w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:54" + "Date": "2022-10-22 14:36:54", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-ubc02/anat/sub-ubc02_space-other_T2star_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-ubc02/anat/sub-ubc02_space-other_T2star_desc-softseg_label-SC_seg.json index 19c3fc2686..6621d417c6 100644 --- a/derivatives/labels_softseg_bin/sub-ubc02/anat/sub-ubc02_space-other_T2star_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-ubc02/anat/sub-ubc02_space-other_T2star_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:55" + "Date": "2022-10-22 14:36:55", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-ubc02/anat/sub-ubc02_space-other_T2w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-ubc02/anat/sub-ubc02_space-other_T2w_desc-softseg_label-SC_seg.json index 19c3fc2686..2cc4a471ca 100644 --- a/derivatives/labels_softseg_bin/sub-ubc02/anat/sub-ubc02_space-other_T2w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-ubc02/anat/sub-ubc02_space-other_T2w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:55" + "Date": "2022-10-22 14:36:55", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-ubc03/anat/sub-ubc03_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-ubc03/anat/sub-ubc03_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json index 19c3fc2686..f6b4b40e0b 100644 --- a/derivatives/labels_softseg_bin/sub-ubc03/anat/sub-ubc03_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-ubc03/anat/sub-ubc03_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:55" + "Date": "2022-10-22 14:36:55", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-ubc03/anat/sub-ubc03_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-ubc03/anat/sub-ubc03_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json index 19c3fc2686..f6b4b40e0b 100644 --- a/derivatives/labels_softseg_bin/sub-ubc03/anat/sub-ubc03_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-ubc03/anat/sub-ubc03_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:55" + "Date": "2022-10-22 14:36:55", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-ubc03/anat/sub-ubc03_space-other_T1w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-ubc03/anat/sub-ubc03_space-other_T1w_desc-softseg_label-SC_seg.json index 19c3fc2686..ccb246b725 100644 --- a/derivatives/labels_softseg_bin/sub-ubc03/anat/sub-ubc03_space-other_T1w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-ubc03/anat/sub-ubc03_space-other_T1w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:55" + "Date": "2022-10-22 14:36:55", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-ubc03/anat/sub-ubc03_space-other_T2star_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-ubc03/anat/sub-ubc03_space-other_T2star_desc-softseg_label-SC_seg.json index 19c3fc2686..6621d417c6 100644 --- a/derivatives/labels_softseg_bin/sub-ubc03/anat/sub-ubc03_space-other_T2star_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-ubc03/anat/sub-ubc03_space-other_T2star_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:55" + "Date": "2022-10-22 14:36:55", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-ubc03/anat/sub-ubc03_space-other_T2w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-ubc03/anat/sub-ubc03_space-other_T2w_desc-softseg_label-SC_seg.json index 19c3fc2686..2cc4a471ca 100644 --- a/derivatives/labels_softseg_bin/sub-ubc03/anat/sub-ubc03_space-other_T2w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-ubc03/anat/sub-ubc03_space-other_T2w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:55" + "Date": "2022-10-22 14:36:55", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-ubc04/anat/sub-ubc04_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-ubc04/anat/sub-ubc04_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json index 19c3fc2686..f6b4b40e0b 100644 --- a/derivatives/labels_softseg_bin/sub-ubc04/anat/sub-ubc04_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-ubc04/anat/sub-ubc04_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:55" + "Date": "2022-10-22 14:36:55", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-ubc04/anat/sub-ubc04_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-ubc04/anat/sub-ubc04_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json index 19c3fc2686..f6b4b40e0b 100644 --- a/derivatives/labels_softseg_bin/sub-ubc04/anat/sub-ubc04_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-ubc04/anat/sub-ubc04_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:55" + "Date": "2022-10-22 14:36:55", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-ubc04/anat/sub-ubc04_space-other_T1w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-ubc04/anat/sub-ubc04_space-other_T1w_desc-softseg_label-SC_seg.json index 19c3fc2686..ccb246b725 100644 --- a/derivatives/labels_softseg_bin/sub-ubc04/anat/sub-ubc04_space-other_T1w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-ubc04/anat/sub-ubc04_space-other_T1w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:55" + "Date": "2022-10-22 14:36:55", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-ubc04/anat/sub-ubc04_space-other_T2star_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-ubc04/anat/sub-ubc04_space-other_T2star_desc-softseg_label-SC_seg.json index 19c3fc2686..6621d417c6 100644 --- a/derivatives/labels_softseg_bin/sub-ubc04/anat/sub-ubc04_space-other_T2star_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-ubc04/anat/sub-ubc04_space-other_T2star_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:55" + "Date": "2022-10-22 14:36:55", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-ubc04/anat/sub-ubc04_space-other_T2w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-ubc04/anat/sub-ubc04_space-other_T2w_desc-softseg_label-SC_seg.json index 19c3fc2686..2cc4a471ca 100644 --- a/derivatives/labels_softseg_bin/sub-ubc04/anat/sub-ubc04_space-other_T2w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-ubc04/anat/sub-ubc04_space-other_T2w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:55" + "Date": "2022-10-22 14:36:55", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-ubc05/anat/sub-ubc05_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-ubc05/anat/sub-ubc05_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json index 19c3fc2686..f6b4b40e0b 100644 --- a/derivatives/labels_softseg_bin/sub-ubc05/anat/sub-ubc05_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-ubc05/anat/sub-ubc05_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:55" + "Date": "2022-10-22 14:36:55", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-ubc05/anat/sub-ubc05_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-ubc05/anat/sub-ubc05_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json index 19c3fc2686..f6b4b40e0b 100644 --- a/derivatives/labels_softseg_bin/sub-ubc05/anat/sub-ubc05_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-ubc05/anat/sub-ubc05_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:55" + "Date": "2022-10-22 14:36:55", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-ubc05/anat/sub-ubc05_space-other_T1w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-ubc05/anat/sub-ubc05_space-other_T1w_desc-softseg_label-SC_seg.json index 19c3fc2686..ccb246b725 100644 --- a/derivatives/labels_softseg_bin/sub-ubc05/anat/sub-ubc05_space-other_T1w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-ubc05/anat/sub-ubc05_space-other_T1w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:55" + "Date": "2022-10-22 14:36:55", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-ubc05/anat/sub-ubc05_space-other_T2star_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-ubc05/anat/sub-ubc05_space-other_T2star_desc-softseg_label-SC_seg.json index 19c3fc2686..6621d417c6 100644 --- a/derivatives/labels_softseg_bin/sub-ubc05/anat/sub-ubc05_space-other_T2star_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-ubc05/anat/sub-ubc05_space-other_T2star_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:55" + "Date": "2022-10-22 14:36:55", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-ubc05/anat/sub-ubc05_space-other_T2w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-ubc05/anat/sub-ubc05_space-other_T2w_desc-softseg_label-SC_seg.json index 19c3fc2686..2cc4a471ca 100644 --- a/derivatives/labels_softseg_bin/sub-ubc05/anat/sub-ubc05_space-other_T2w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-ubc05/anat/sub-ubc05_space-other_T2w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:55" + "Date": "2022-10-22 14:36:55", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-ubc06/anat/sub-ubc06_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-ubc06/anat/sub-ubc06_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json index 19c3fc2686..f6b4b40e0b 100644 --- a/derivatives/labels_softseg_bin/sub-ubc06/anat/sub-ubc06_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-ubc06/anat/sub-ubc06_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:55" + "Date": "2022-10-22 14:36:55", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-ubc06/anat/sub-ubc06_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-ubc06/anat/sub-ubc06_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json index 19c3fc2686..f6b4b40e0b 100644 --- a/derivatives/labels_softseg_bin/sub-ubc06/anat/sub-ubc06_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-ubc06/anat/sub-ubc06_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:55" + "Date": "2022-10-22 14:36:55", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-ubc06/anat/sub-ubc06_space-other_T1w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-ubc06/anat/sub-ubc06_space-other_T1w_desc-softseg_label-SC_seg.json index 3edd32e833..b56e816b28 100644 --- a/derivatives/labels_softseg_bin/sub-ubc06/anat/sub-ubc06_space-other_T1w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-ubc06/anat/sub-ubc06_space-other_T1w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:56" + "Date": "2022-10-22 14:36:56", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-ubc06/anat/sub-ubc06_space-other_T2star_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-ubc06/anat/sub-ubc06_space-other_T2star_desc-softseg_label-SC_seg.json index 3edd32e833..0c44905d0a 100644 --- a/derivatives/labels_softseg_bin/sub-ubc06/anat/sub-ubc06_space-other_T2star_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-ubc06/anat/sub-ubc06_space-other_T2star_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:56" + "Date": "2022-10-22 14:36:56", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-ubc06/anat/sub-ubc06_space-other_T2w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-ubc06/anat/sub-ubc06_space-other_T2w_desc-softseg_label-SC_seg.json index 3edd32e833..197223f7fa 100644 --- a/derivatives/labels_softseg_bin/sub-ubc06/anat/sub-ubc06_space-other_T2w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-ubc06/anat/sub-ubc06_space-other_T2w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:56" + "Date": "2022-10-22 14:36:56", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-ucl01/anat/sub-ucl01_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-ucl01/anat/sub-ucl01_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json index d83729e1ff..36f825e009 100644 --- a/derivatives/labels_softseg_bin/sub-ucl01/anat/sub-ucl01_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-ucl01/anat/sub-ucl01_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:57" + "Date": "2022-10-22 14:36:57", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-ucl01/anat/sub-ucl01_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-ucl01/anat/sub-ucl01_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json index d83729e1ff..36f825e009 100644 --- a/derivatives/labels_softseg_bin/sub-ucl01/anat/sub-ucl01_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-ucl01/anat/sub-ucl01_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:57" + "Date": "2022-10-22 14:36:57", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-ucl01/anat/sub-ucl01_space-other_T1w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-ucl01/anat/sub-ucl01_space-other_T1w_desc-softseg_label-SC_seg.json index d83729e1ff..9bab82f458 100644 --- a/derivatives/labels_softseg_bin/sub-ucl01/anat/sub-ucl01_space-other_T1w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-ucl01/anat/sub-ucl01_space-other_T1w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:57" + "Date": "2022-10-22 14:36:57", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-ucl01/anat/sub-ucl01_space-other_T2star_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-ucl01/anat/sub-ucl01_space-other_T2star_desc-softseg_label-SC_seg.json index d83729e1ff..a127305914 100644 --- a/derivatives/labels_softseg_bin/sub-ucl01/anat/sub-ucl01_space-other_T2star_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-ucl01/anat/sub-ucl01_space-other_T2star_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:57" + "Date": "2022-10-22 14:36:57", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-ucl01/anat/sub-ucl01_space-other_T2w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-ucl01/anat/sub-ucl01_space-other_T2w_desc-softseg_label-SC_seg.json index d83729e1ff..c1836a8a67 100644 --- a/derivatives/labels_softseg_bin/sub-ucl01/anat/sub-ucl01_space-other_T2w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-ucl01/anat/sub-ucl01_space-other_T2w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:57" + "Date": "2022-10-22 14:36:57", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-ucl02/anat/sub-ucl02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-ucl02/anat/sub-ucl02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json index d83729e1ff..36f825e009 100644 --- a/derivatives/labels_softseg_bin/sub-ucl02/anat/sub-ucl02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-ucl02/anat/sub-ucl02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:57" + "Date": "2022-10-22 14:36:57", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-ucl02/anat/sub-ucl02_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-ucl02/anat/sub-ucl02_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json index d83729e1ff..36f825e009 100644 --- a/derivatives/labels_softseg_bin/sub-ucl02/anat/sub-ucl02_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-ucl02/anat/sub-ucl02_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:57" + "Date": "2022-10-22 14:36:57", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-ucl02/anat/sub-ucl02_space-other_T1w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-ucl02/anat/sub-ucl02_space-other_T1w_desc-softseg_label-SC_seg.json index d83729e1ff..9bab82f458 100644 --- a/derivatives/labels_softseg_bin/sub-ucl02/anat/sub-ucl02_space-other_T1w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-ucl02/anat/sub-ucl02_space-other_T1w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:57" + "Date": "2022-10-22 14:36:57", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-ucl02/anat/sub-ucl02_space-other_T2star_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-ucl02/anat/sub-ucl02_space-other_T2star_desc-softseg_label-SC_seg.json index d83729e1ff..a127305914 100644 --- a/derivatives/labels_softseg_bin/sub-ucl02/anat/sub-ucl02_space-other_T2star_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-ucl02/anat/sub-ucl02_space-other_T2star_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:57" + "Date": "2022-10-22 14:36:57", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-ucl02/anat/sub-ucl02_space-other_T2w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-ucl02/anat/sub-ucl02_space-other_T2w_desc-softseg_label-SC_seg.json index d83729e1ff..c1836a8a67 100644 --- a/derivatives/labels_softseg_bin/sub-ucl02/anat/sub-ucl02_space-other_T2w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-ucl02/anat/sub-ucl02_space-other_T2w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:57" + "Date": "2022-10-22 14:36:57", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-ucl03/anat/sub-ucl03_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-ucl03/anat/sub-ucl03_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json index 0715327c27..3f894fc92f 100644 --- a/derivatives/labels_softseg_bin/sub-ucl03/anat/sub-ucl03_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-ucl03/anat/sub-ucl03_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:58" + "Date": "2022-10-22 14:36:58", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-ucl03/anat/sub-ucl03_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-ucl03/anat/sub-ucl03_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json index 0715327c27..3f894fc92f 100644 --- a/derivatives/labels_softseg_bin/sub-ucl03/anat/sub-ucl03_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-ucl03/anat/sub-ucl03_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:58" + "Date": "2022-10-22 14:36:58", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-ucl03/anat/sub-ucl03_space-other_T1w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-ucl03/anat/sub-ucl03_space-other_T1w_desc-softseg_label-SC_seg.json index 0715327c27..c5a7c1d9a3 100644 --- a/derivatives/labels_softseg_bin/sub-ucl03/anat/sub-ucl03_space-other_T1w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-ucl03/anat/sub-ucl03_space-other_T1w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:58" + "Date": "2022-10-22 14:36:58", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-ucl03/anat/sub-ucl03_space-other_T2star_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-ucl03/anat/sub-ucl03_space-other_T2star_desc-softseg_label-SC_seg.json index 0715327c27..1c1fec505a 100644 --- a/derivatives/labels_softseg_bin/sub-ucl03/anat/sub-ucl03_space-other_T2star_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-ucl03/anat/sub-ucl03_space-other_T2star_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:58" + "Date": "2022-10-22 14:36:58", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-ucl03/anat/sub-ucl03_space-other_T2w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-ucl03/anat/sub-ucl03_space-other_T2w_desc-softseg_label-SC_seg.json index 0715327c27..02673d345b 100644 --- a/derivatives/labels_softseg_bin/sub-ucl03/anat/sub-ucl03_space-other_T2w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-ucl03/anat/sub-ucl03_space-other_T2w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:58" + "Date": "2022-10-22 14:36:58", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-ucl04/anat/sub-ucl04_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-ucl04/anat/sub-ucl04_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json index 0715327c27..3f894fc92f 100644 --- a/derivatives/labels_softseg_bin/sub-ucl04/anat/sub-ucl04_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-ucl04/anat/sub-ucl04_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:58" + "Date": "2022-10-22 14:36:58", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-ucl04/anat/sub-ucl04_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-ucl04/anat/sub-ucl04_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json index 0715327c27..3f894fc92f 100644 --- a/derivatives/labels_softseg_bin/sub-ucl04/anat/sub-ucl04_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-ucl04/anat/sub-ucl04_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:58" + "Date": "2022-10-22 14:36:58", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-ucl04/anat/sub-ucl04_space-other_T1w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-ucl04/anat/sub-ucl04_space-other_T1w_desc-softseg_label-SC_seg.json index 0715327c27..c5a7c1d9a3 100644 --- a/derivatives/labels_softseg_bin/sub-ucl04/anat/sub-ucl04_space-other_T1w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-ucl04/anat/sub-ucl04_space-other_T1w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:58" + "Date": "2022-10-22 14:36:58", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-ucl04/anat/sub-ucl04_space-other_T2star_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-ucl04/anat/sub-ucl04_space-other_T2star_desc-softseg_label-SC_seg.json index 0715327c27..1c1fec505a 100644 --- a/derivatives/labels_softseg_bin/sub-ucl04/anat/sub-ucl04_space-other_T2star_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-ucl04/anat/sub-ucl04_space-other_T2star_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:58" + "Date": "2022-10-22 14:36:58", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-ucl04/anat/sub-ucl04_space-other_T2w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-ucl04/anat/sub-ucl04_space-other_T2w_desc-softseg_label-SC_seg.json index 0715327c27..02673d345b 100644 --- a/derivatives/labels_softseg_bin/sub-ucl04/anat/sub-ucl04_space-other_T2w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-ucl04/anat/sub-ucl04_space-other_T2w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:58" + "Date": "2022-10-22 14:36:58", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-ucl05/anat/sub-ucl05_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-ucl05/anat/sub-ucl05_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json index 0715327c27..3f894fc92f 100644 --- a/derivatives/labels_softseg_bin/sub-ucl05/anat/sub-ucl05_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-ucl05/anat/sub-ucl05_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:58" + "Date": "2022-10-22 14:36:58", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-ucl05/anat/sub-ucl05_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-ucl05/anat/sub-ucl05_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json index 0715327c27..3f894fc92f 100644 --- a/derivatives/labels_softseg_bin/sub-ucl05/anat/sub-ucl05_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-ucl05/anat/sub-ucl05_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:58" + "Date": "2022-10-22 14:36:58", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-ucl05/anat/sub-ucl05_space-other_T1w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-ucl05/anat/sub-ucl05_space-other_T1w_desc-softseg_label-SC_seg.json index 0715327c27..c5a7c1d9a3 100644 --- a/derivatives/labels_softseg_bin/sub-ucl05/anat/sub-ucl05_space-other_T1w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-ucl05/anat/sub-ucl05_space-other_T1w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:58" + "Date": "2022-10-22 14:36:58", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-ucl05/anat/sub-ucl05_space-other_T2star_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-ucl05/anat/sub-ucl05_space-other_T2star_desc-softseg_label-SC_seg.json index 0715327c27..1c1fec505a 100644 --- a/derivatives/labels_softseg_bin/sub-ucl05/anat/sub-ucl05_space-other_T2star_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-ucl05/anat/sub-ucl05_space-other_T2star_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:58" + "Date": "2022-10-22 14:36:58", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-ucl05/anat/sub-ucl05_space-other_T2w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-ucl05/anat/sub-ucl05_space-other_T2w_desc-softseg_label-SC_seg.json index 0715327c27..02673d345b 100644 --- a/derivatives/labels_softseg_bin/sub-ucl05/anat/sub-ucl05_space-other_T2w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-ucl05/anat/sub-ucl05_space-other_T2w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:58" + "Date": "2022-10-22 14:36:58", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-ucl06/anat/sub-ucl06_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-ucl06/anat/sub-ucl06_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json index 0715327c27..3f894fc92f 100644 --- a/derivatives/labels_softseg_bin/sub-ucl06/anat/sub-ucl06_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-ucl06/anat/sub-ucl06_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:58" + "Date": "2022-10-22 14:36:58", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-ucl06/anat/sub-ucl06_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-ucl06/anat/sub-ucl06_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json index 0715327c27..3f894fc92f 100644 --- a/derivatives/labels_softseg_bin/sub-ucl06/anat/sub-ucl06_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-ucl06/anat/sub-ucl06_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:58" + "Date": "2022-10-22 14:36:58", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-ucl06/anat/sub-ucl06_space-other_T1w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-ucl06/anat/sub-ucl06_space-other_T1w_desc-softseg_label-SC_seg.json index 0715327c27..c5a7c1d9a3 100644 --- a/derivatives/labels_softseg_bin/sub-ucl06/anat/sub-ucl06_space-other_T1w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-ucl06/anat/sub-ucl06_space-other_T1w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:58" + "Date": "2022-10-22 14:36:58", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-ucl06/anat/sub-ucl06_space-other_T2star_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-ucl06/anat/sub-ucl06_space-other_T2star_desc-softseg_label-SC_seg.json index 0715327c27..1c1fec505a 100644 --- a/derivatives/labels_softseg_bin/sub-ucl06/anat/sub-ucl06_space-other_T2star_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-ucl06/anat/sub-ucl06_space-other_T2star_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:58" + "Date": "2022-10-22 14:36:58", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-ucl06/anat/sub-ucl06_space-other_T2w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-ucl06/anat/sub-ucl06_space-other_T2w_desc-softseg_label-SC_seg.json index 0715327c27..02673d345b 100644 --- a/derivatives/labels_softseg_bin/sub-ucl06/anat/sub-ucl06_space-other_T2w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-ucl06/anat/sub-ucl06_space-other_T2w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:58" + "Date": "2022-10-22 14:36:58", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-unf01/anat/sub-unf01_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-unf01/anat/sub-unf01_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json index 0715327c27..3f894fc92f 100644 --- a/derivatives/labels_softseg_bin/sub-unf01/anat/sub-unf01_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-unf01/anat/sub-unf01_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:58" + "Date": "2022-10-22 14:36:58", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-unf01/anat/sub-unf01_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-unf01/anat/sub-unf01_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json index 0715327c27..3f894fc92f 100644 --- a/derivatives/labels_softseg_bin/sub-unf01/anat/sub-unf01_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-unf01/anat/sub-unf01_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:58" + "Date": "2022-10-22 14:36:58", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-unf01/anat/sub-unf01_space-other_T1w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-unf01/anat/sub-unf01_space-other_T1w_desc-softseg_label-SC_seg.json index 0715327c27..c5a7c1d9a3 100644 --- a/derivatives/labels_softseg_bin/sub-unf01/anat/sub-unf01_space-other_T1w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-unf01/anat/sub-unf01_space-other_T1w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:58" + "Date": "2022-10-22 14:36:58", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-unf01/anat/sub-unf01_space-other_T2star_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-unf01/anat/sub-unf01_space-other_T2star_desc-softseg_label-SC_seg.json index d21aef3049..b5368e3cdb 100644 --- a/derivatives/labels_softseg_bin/sub-unf01/anat/sub-unf01_space-other_T2star_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-unf01/anat/sub-unf01_space-other_T2star_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:59" + "Date": "2022-10-22 14:36:59", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-unf01/anat/sub-unf01_space-other_T2w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-unf01/anat/sub-unf01_space-other_T2w_desc-softseg_label-SC_seg.json index d21aef3049..613dd8c66f 100644 --- a/derivatives/labels_softseg_bin/sub-unf01/anat/sub-unf01_space-other_T2w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-unf01/anat/sub-unf01_space-other_T2w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:59" + "Date": "2022-10-22 14:36:59", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-unf02/anat/sub-unf02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-unf02/anat/sub-unf02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json index d21aef3049..d390eb3a9e 100644 --- a/derivatives/labels_softseg_bin/sub-unf02/anat/sub-unf02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-unf02/anat/sub-unf02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:59" + "Date": "2022-10-22 14:36:59", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-unf02/anat/sub-unf02_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-unf02/anat/sub-unf02_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json index d21aef3049..d390eb3a9e 100644 --- a/derivatives/labels_softseg_bin/sub-unf02/anat/sub-unf02_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-unf02/anat/sub-unf02_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:59" + "Date": "2022-10-22 14:36:59", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-unf02/anat/sub-unf02_space-other_T1w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-unf02/anat/sub-unf02_space-other_T1w_desc-softseg_label-SC_seg.json index d21aef3049..a0f1676066 100644 --- a/derivatives/labels_softseg_bin/sub-unf02/anat/sub-unf02_space-other_T1w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-unf02/anat/sub-unf02_space-other_T1w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:59" + "Date": "2022-10-22 14:36:59", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-unf02/anat/sub-unf02_space-other_T2star_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-unf02/anat/sub-unf02_space-other_T2star_desc-softseg_label-SC_seg.json index d21aef3049..b5368e3cdb 100644 --- a/derivatives/labels_softseg_bin/sub-unf02/anat/sub-unf02_space-other_T2star_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-unf02/anat/sub-unf02_space-other_T2star_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:59" + "Date": "2022-10-22 14:36:59", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-unf02/anat/sub-unf02_space-other_T2w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-unf02/anat/sub-unf02_space-other_T2w_desc-softseg_label-SC_seg.json index d21aef3049..613dd8c66f 100644 --- a/derivatives/labels_softseg_bin/sub-unf02/anat/sub-unf02_space-other_T2w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-unf02/anat/sub-unf02_space-other_T2w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:59" + "Date": "2022-10-22 14:36:59", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-unf03/anat/sub-unf03_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-unf03/anat/sub-unf03_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json index d21aef3049..d390eb3a9e 100644 --- a/derivatives/labels_softseg_bin/sub-unf03/anat/sub-unf03_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-unf03/anat/sub-unf03_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:59" + "Date": "2022-10-22 14:36:59", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-unf03/anat/sub-unf03_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-unf03/anat/sub-unf03_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json index d21aef3049..d390eb3a9e 100644 --- a/derivatives/labels_softseg_bin/sub-unf03/anat/sub-unf03_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-unf03/anat/sub-unf03_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:59" + "Date": "2022-10-22 14:36:59", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-unf03/anat/sub-unf03_space-other_T1w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-unf03/anat/sub-unf03_space-other_T1w_desc-softseg_label-SC_seg.json index d21aef3049..a0f1676066 100644 --- a/derivatives/labels_softseg_bin/sub-unf03/anat/sub-unf03_space-other_T1w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-unf03/anat/sub-unf03_space-other_T1w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:59" + "Date": "2022-10-22 14:36:59", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-unf03/anat/sub-unf03_space-other_T2star_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-unf03/anat/sub-unf03_space-other_T2star_desc-softseg_label-SC_seg.json index d21aef3049..b5368e3cdb 100644 --- a/derivatives/labels_softseg_bin/sub-unf03/anat/sub-unf03_space-other_T2star_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-unf03/anat/sub-unf03_space-other_T2star_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:59" + "Date": "2022-10-22 14:36:59", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-unf03/anat/sub-unf03_space-other_T2w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-unf03/anat/sub-unf03_space-other_T2w_desc-softseg_label-SC_seg.json index d21aef3049..613dd8c66f 100644 --- a/derivatives/labels_softseg_bin/sub-unf03/anat/sub-unf03_space-other_T2w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-unf03/anat/sub-unf03_space-other_T2w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:59" + "Date": "2022-10-22 14:36:59", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-unf04/anat/sub-unf04_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-unf04/anat/sub-unf04_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json index d21aef3049..d390eb3a9e 100644 --- a/derivatives/labels_softseg_bin/sub-unf04/anat/sub-unf04_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-unf04/anat/sub-unf04_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:59" + "Date": "2022-10-22 14:36:59", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-unf04/anat/sub-unf04_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-unf04/anat/sub-unf04_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json index d21aef3049..d390eb3a9e 100644 --- a/derivatives/labels_softseg_bin/sub-unf04/anat/sub-unf04_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-unf04/anat/sub-unf04_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:59" + "Date": "2022-10-22 14:36:59", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-unf04/anat/sub-unf04_space-other_T1w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-unf04/anat/sub-unf04_space-other_T1w_desc-softseg_label-SC_seg.json index d21aef3049..a0f1676066 100644 --- a/derivatives/labels_softseg_bin/sub-unf04/anat/sub-unf04_space-other_T1w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-unf04/anat/sub-unf04_space-other_T1w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:59" + "Date": "2022-10-22 14:36:59", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-unf04/anat/sub-unf04_space-other_T2star_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-unf04/anat/sub-unf04_space-other_T2star_desc-softseg_label-SC_seg.json index d21aef3049..b5368e3cdb 100644 --- a/derivatives/labels_softseg_bin/sub-unf04/anat/sub-unf04_space-other_T2star_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-unf04/anat/sub-unf04_space-other_T2star_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:59" + "Date": "2022-10-22 14:36:59", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-unf04/anat/sub-unf04_space-other_T2w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-unf04/anat/sub-unf04_space-other_T2w_desc-softseg_label-SC_seg.json index d21aef3049..613dd8c66f 100644 --- a/derivatives/labels_softseg_bin/sub-unf04/anat/sub-unf04_space-other_T2w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-unf04/anat/sub-unf04_space-other_T2w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:59" + "Date": "2022-10-22 14:36:59", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-unf05/anat/sub-unf05_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-unf05/anat/sub-unf05_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json index d21aef3049..d390eb3a9e 100644 --- a/derivatives/labels_softseg_bin/sub-unf05/anat/sub-unf05_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-unf05/anat/sub-unf05_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:59" + "Date": "2022-10-22 14:36:59", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-unf05/anat/sub-unf05_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-unf05/anat/sub-unf05_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json index d21aef3049..d390eb3a9e 100644 --- a/derivatives/labels_softseg_bin/sub-unf05/anat/sub-unf05_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-unf05/anat/sub-unf05_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:59" + "Date": "2022-10-22 14:36:59", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-unf05/anat/sub-unf05_space-other_T1w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-unf05/anat/sub-unf05_space-other_T1w_desc-softseg_label-SC_seg.json index d21aef3049..a0f1676066 100644 --- a/derivatives/labels_softseg_bin/sub-unf05/anat/sub-unf05_space-other_T1w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-unf05/anat/sub-unf05_space-other_T1w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:59" + "Date": "2022-10-22 14:36:59", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-unf05/anat/sub-unf05_space-other_T2star_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-unf05/anat/sub-unf05_space-other_T2star_desc-softseg_label-SC_seg.json index 16762e94c9..81efb1ee29 100644 --- a/derivatives/labels_softseg_bin/sub-unf05/anat/sub-unf05_space-other_T2star_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-unf05/anat/sub-unf05_space-other_T2star_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:37:00" + "Date": "2022-10-22 14:37:00", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-unf05/anat/sub-unf05_space-other_T2w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-unf05/anat/sub-unf05_space-other_T2w_desc-softseg_label-SC_seg.json index 16762e94c9..c604376374 100644 --- a/derivatives/labels_softseg_bin/sub-unf05/anat/sub-unf05_space-other_T2w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-unf05/anat/sub-unf05_space-other_T2w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:37:00" + "Date": "2022-10-22 14:37:00", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-unf06/anat/sub-unf06_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-unf06/anat/sub-unf06_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json index 16762e94c9..05af99e192 100644 --- a/derivatives/labels_softseg_bin/sub-unf06/anat/sub-unf06_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-unf06/anat/sub-unf06_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:37:00" + "Date": "2022-10-22 14:37:00", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-unf06/anat/sub-unf06_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-unf06/anat/sub-unf06_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json index 16762e94c9..05af99e192 100644 --- a/derivatives/labels_softseg_bin/sub-unf06/anat/sub-unf06_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-unf06/anat/sub-unf06_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:37:00" + "Date": "2022-10-22 14:37:00", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-unf06/anat/sub-unf06_space-other_T1w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-unf06/anat/sub-unf06_space-other_T1w_desc-softseg_label-SC_seg.json index 16762e94c9..ba168c3c5c 100644 --- a/derivatives/labels_softseg_bin/sub-unf06/anat/sub-unf06_space-other_T1w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-unf06/anat/sub-unf06_space-other_T1w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:37:00" + "Date": "2022-10-22 14:37:00", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-unf06/anat/sub-unf06_space-other_T2star_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-unf06/anat/sub-unf06_space-other_T2star_desc-softseg_label-SC_seg.json index 16762e94c9..81efb1ee29 100644 --- a/derivatives/labels_softseg_bin/sub-unf06/anat/sub-unf06_space-other_T2star_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-unf06/anat/sub-unf06_space-other_T2star_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:37:00" + "Date": "2022-10-22 14:37:00", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-unf06/anat/sub-unf06_space-other_T2w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-unf06/anat/sub-unf06_space-other_T2w_desc-softseg_label-SC_seg.json index 16762e94c9..c604376374 100644 --- a/derivatives/labels_softseg_bin/sub-unf06/anat/sub-unf06_space-other_T2w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-unf06/anat/sub-unf06_space-other_T2w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:37:00" + "Date": "2022-10-22 14:37:00", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-unf07/anat/sub-unf07_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-unf07/anat/sub-unf07_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json index 16762e94c9..05af99e192 100644 --- a/derivatives/labels_softseg_bin/sub-unf07/anat/sub-unf07_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-unf07/anat/sub-unf07_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:37:00" + "Date": "2022-10-22 14:37:00", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-unf07/anat/sub-unf07_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-unf07/anat/sub-unf07_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json index 16762e94c9..05af99e192 100644 --- a/derivatives/labels_softseg_bin/sub-unf07/anat/sub-unf07_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-unf07/anat/sub-unf07_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:37:00" + "Date": "2022-10-22 14:37:00", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-unf07/anat/sub-unf07_space-other_T1w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-unf07/anat/sub-unf07_space-other_T1w_desc-softseg_label-SC_seg.json index 16762e94c9..ba168c3c5c 100644 --- a/derivatives/labels_softseg_bin/sub-unf07/anat/sub-unf07_space-other_T1w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-unf07/anat/sub-unf07_space-other_T1w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:37:00" + "Date": "2022-10-22 14:37:00", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-unf07/anat/sub-unf07_space-other_T2star_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-unf07/anat/sub-unf07_space-other_T2star_desc-softseg_label-SC_seg.json index 16762e94c9..81efb1ee29 100644 --- a/derivatives/labels_softseg_bin/sub-unf07/anat/sub-unf07_space-other_T2star_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-unf07/anat/sub-unf07_space-other_T2star_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:37:00" + "Date": "2022-10-22 14:37:00", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-unf07/anat/sub-unf07_space-other_T2w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-unf07/anat/sub-unf07_space-other_T2w_desc-softseg_label-SC_seg.json index 16762e94c9..c604376374 100644 --- a/derivatives/labels_softseg_bin/sub-unf07/anat/sub-unf07_space-other_T2w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-unf07/anat/sub-unf07_space-other_T2w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:37:00" + "Date": "2022-10-22 14:37:00", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-vallHebron01/anat/sub-vallHebron01_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-vallHebron01/anat/sub-vallHebron01_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json index 16762e94c9..05af99e192 100644 --- a/derivatives/labels_softseg_bin/sub-vallHebron01/anat/sub-vallHebron01_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-vallHebron01/anat/sub-vallHebron01_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:37:00" + "Date": "2022-10-22 14:37:00", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-vallHebron01/anat/sub-vallHebron01_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-vallHebron01/anat/sub-vallHebron01_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json index 16762e94c9..05af99e192 100644 --- a/derivatives/labels_softseg_bin/sub-vallHebron01/anat/sub-vallHebron01_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-vallHebron01/anat/sub-vallHebron01_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:37:00" + "Date": "2022-10-22 14:37:00", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-vallHebron01/anat/sub-vallHebron01_space-other_T1w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-vallHebron01/anat/sub-vallHebron01_space-other_T1w_desc-softseg_label-SC_seg.json index 16762e94c9..ba168c3c5c 100644 --- a/derivatives/labels_softseg_bin/sub-vallHebron01/anat/sub-vallHebron01_space-other_T1w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-vallHebron01/anat/sub-vallHebron01_space-other_T1w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:37:00" + "Date": "2022-10-22 14:37:00", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-vallHebron01/anat/sub-vallHebron01_space-other_T2star_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-vallHebron01/anat/sub-vallHebron01_space-other_T2star_desc-softseg_label-SC_seg.json index 16762e94c9..81efb1ee29 100644 --- a/derivatives/labels_softseg_bin/sub-vallHebron01/anat/sub-vallHebron01_space-other_T2star_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-vallHebron01/anat/sub-vallHebron01_space-other_T2star_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:37:00" + "Date": "2022-10-22 14:37:00", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-vallHebron01/anat/sub-vallHebron01_space-other_T2w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-vallHebron01/anat/sub-vallHebron01_space-other_T2w_desc-softseg_label-SC_seg.json index 16762e94c9..c604376374 100644 --- a/derivatives/labels_softseg_bin/sub-vallHebron01/anat/sub-vallHebron01_space-other_T2w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-vallHebron01/anat/sub-vallHebron01_space-other_T2w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:37:00" + "Date": "2022-10-22 14:37:00", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-vallHebron02/anat/sub-vallHebron02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-vallHebron02/anat/sub-vallHebron02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json index 16762e94c9..05af99e192 100644 --- a/derivatives/labels_softseg_bin/sub-vallHebron02/anat/sub-vallHebron02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-vallHebron02/anat/sub-vallHebron02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:37:00" + "Date": "2022-10-22 14:37:00", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-vallHebron02/anat/sub-vallHebron02_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-vallHebron02/anat/sub-vallHebron02_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json index 16762e94c9..05af99e192 100644 --- a/derivatives/labels_softseg_bin/sub-vallHebron02/anat/sub-vallHebron02_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-vallHebron02/anat/sub-vallHebron02_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:37:00" + "Date": "2022-10-22 14:37:00", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-vallHebron02/anat/sub-vallHebron02_space-other_T1w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-vallHebron02/anat/sub-vallHebron02_space-other_T1w_desc-softseg_label-SC_seg.json index 16762e94c9..ba168c3c5c 100644 --- a/derivatives/labels_softseg_bin/sub-vallHebron02/anat/sub-vallHebron02_space-other_T1w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-vallHebron02/anat/sub-vallHebron02_space-other_T1w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:37:00" + "Date": "2022-10-22 14:37:00", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-vallHebron02/anat/sub-vallHebron02_space-other_T2star_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-vallHebron02/anat/sub-vallHebron02_space-other_T2star_desc-softseg_label-SC_seg.json index 16762e94c9..81efb1ee29 100644 --- a/derivatives/labels_softseg_bin/sub-vallHebron02/anat/sub-vallHebron02_space-other_T2star_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-vallHebron02/anat/sub-vallHebron02_space-other_T2star_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:37:00" + "Date": "2022-10-22 14:37:00", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-vallHebron02/anat/sub-vallHebron02_space-other_T2w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-vallHebron02/anat/sub-vallHebron02_space-other_T2w_desc-softseg_label-SC_seg.json index 16762e94c9..c604376374 100644 --- a/derivatives/labels_softseg_bin/sub-vallHebron02/anat/sub-vallHebron02_space-other_T2w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-vallHebron02/anat/sub-vallHebron02_space-other_T2w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:37:00" + "Date": "2022-10-22 14:37:00", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-vallHebron03/anat/sub-vallHebron03_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-vallHebron03/anat/sub-vallHebron03_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json index e911b38d69..f5bedd3d97 100644 --- a/derivatives/labels_softseg_bin/sub-vallHebron03/anat/sub-vallHebron03_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-vallHebron03/anat/sub-vallHebron03_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:37:01" + "Date": "2022-10-22 14:37:01", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-vallHebron03/anat/sub-vallHebron03_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-vallHebron03/anat/sub-vallHebron03_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json index e911b38d69..f5bedd3d97 100644 --- a/derivatives/labels_softseg_bin/sub-vallHebron03/anat/sub-vallHebron03_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-vallHebron03/anat/sub-vallHebron03_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:37:01" + "Date": "2022-10-22 14:37:01", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-vallHebron03/anat/sub-vallHebron03_space-other_T1w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-vallHebron03/anat/sub-vallHebron03_space-other_T1w_desc-softseg_label-SC_seg.json index e911b38d69..cf15b583ee 100644 --- a/derivatives/labels_softseg_bin/sub-vallHebron03/anat/sub-vallHebron03_space-other_T1w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-vallHebron03/anat/sub-vallHebron03_space-other_T1w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:37:01" + "Date": "2022-10-22 14:37:01", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-vallHebron03/anat/sub-vallHebron03_space-other_T2star_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-vallHebron03/anat/sub-vallHebron03_space-other_T2star_desc-softseg_label-SC_seg.json index e911b38d69..f12e0fa441 100644 --- a/derivatives/labels_softseg_bin/sub-vallHebron03/anat/sub-vallHebron03_space-other_T2star_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-vallHebron03/anat/sub-vallHebron03_space-other_T2star_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:37:01" + "Date": "2022-10-22 14:37:01", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-vallHebron03/anat/sub-vallHebron03_space-other_T2w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-vallHebron03/anat/sub-vallHebron03_space-other_T2w_desc-softseg_label-SC_seg.json index e911b38d69..4d5d061f63 100644 --- a/derivatives/labels_softseg_bin/sub-vallHebron03/anat/sub-vallHebron03_space-other_T2w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-vallHebron03/anat/sub-vallHebron03_space-other_T2w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:37:01" + "Date": "2022-10-22 14:37:01", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-vallHebron04/anat/sub-vallHebron04_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-vallHebron04/anat/sub-vallHebron04_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json index e911b38d69..f5bedd3d97 100644 --- a/derivatives/labels_softseg_bin/sub-vallHebron04/anat/sub-vallHebron04_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-vallHebron04/anat/sub-vallHebron04_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:37:01" + "Date": "2022-10-22 14:37:01", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-vallHebron04/anat/sub-vallHebron04_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-vallHebron04/anat/sub-vallHebron04_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json index e911b38d69..f5bedd3d97 100644 --- a/derivatives/labels_softseg_bin/sub-vallHebron04/anat/sub-vallHebron04_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-vallHebron04/anat/sub-vallHebron04_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:37:01" + "Date": "2022-10-22 14:37:01", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-vallHebron04/anat/sub-vallHebron04_space-other_T1w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-vallHebron04/anat/sub-vallHebron04_space-other_T1w_desc-softseg_label-SC_seg.json index e911b38d69..cf15b583ee 100644 --- a/derivatives/labels_softseg_bin/sub-vallHebron04/anat/sub-vallHebron04_space-other_T1w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-vallHebron04/anat/sub-vallHebron04_space-other_T1w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:37:01" + "Date": "2022-10-22 14:37:01", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-vallHebron04/anat/sub-vallHebron04_space-other_T2star_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-vallHebron04/anat/sub-vallHebron04_space-other_T2star_desc-softseg_label-SC_seg.json index e911b38d69..f12e0fa441 100644 --- a/derivatives/labels_softseg_bin/sub-vallHebron04/anat/sub-vallHebron04_space-other_T2star_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-vallHebron04/anat/sub-vallHebron04_space-other_T2star_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:37:01" + "Date": "2022-10-22 14:37:01", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-vallHebron04/anat/sub-vallHebron04_space-other_T2w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-vallHebron04/anat/sub-vallHebron04_space-other_T2w_desc-softseg_label-SC_seg.json index e911b38d69..4d5d061f63 100644 --- a/derivatives/labels_softseg_bin/sub-vallHebron04/anat/sub-vallHebron04_space-other_T2w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-vallHebron04/anat/sub-vallHebron04_space-other_T2w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:37:01" + "Date": "2022-10-22 14:37:01", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-vallHebron05/anat/sub-vallHebron05_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-vallHebron05/anat/sub-vallHebron05_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json index e911b38d69..f5bedd3d97 100644 --- a/derivatives/labels_softseg_bin/sub-vallHebron05/anat/sub-vallHebron05_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-vallHebron05/anat/sub-vallHebron05_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:37:01" + "Date": "2022-10-22 14:37:01", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-vallHebron05/anat/sub-vallHebron05_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-vallHebron05/anat/sub-vallHebron05_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json index e911b38d69..f5bedd3d97 100644 --- a/derivatives/labels_softseg_bin/sub-vallHebron05/anat/sub-vallHebron05_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-vallHebron05/anat/sub-vallHebron05_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:37:01" + "Date": "2022-10-22 14:37:01", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-vallHebron05/anat/sub-vallHebron05_space-other_T1w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-vallHebron05/anat/sub-vallHebron05_space-other_T1w_desc-softseg_label-SC_seg.json index e911b38d69..cf15b583ee 100644 --- a/derivatives/labels_softseg_bin/sub-vallHebron05/anat/sub-vallHebron05_space-other_T1w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-vallHebron05/anat/sub-vallHebron05_space-other_T1w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:37:01" + "Date": "2022-10-22 14:37:01", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-vallHebron05/anat/sub-vallHebron05_space-other_T2star_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-vallHebron05/anat/sub-vallHebron05_space-other_T2star_desc-softseg_label-SC_seg.json index e911b38d69..f12e0fa441 100644 --- a/derivatives/labels_softseg_bin/sub-vallHebron05/anat/sub-vallHebron05_space-other_T2star_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-vallHebron05/anat/sub-vallHebron05_space-other_T2star_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:37:01" + "Date": "2022-10-22 14:37:01", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-vallHebron05/anat/sub-vallHebron05_space-other_T2w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-vallHebron05/anat/sub-vallHebron05_space-other_T2w_desc-softseg_label-SC_seg.json index e911b38d69..4d5d061f63 100644 --- a/derivatives/labels_softseg_bin/sub-vallHebron05/anat/sub-vallHebron05_space-other_T2w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-vallHebron05/anat/sub-vallHebron05_space-other_T2w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:37:01" + "Date": "2022-10-22 14:37:01", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-vallHebron06/anat/sub-vallHebron06_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-vallHebron06/anat/sub-vallHebron06_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json index e911b38d69..f5bedd3d97 100644 --- a/derivatives/labels_softseg_bin/sub-vallHebron06/anat/sub-vallHebron06_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-vallHebron06/anat/sub-vallHebron06_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:37:01" + "Date": "2022-10-22 14:37:01", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-vallHebron06/anat/sub-vallHebron06_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-vallHebron06/anat/sub-vallHebron06_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json index e911b38d69..f5bedd3d97 100644 --- a/derivatives/labels_softseg_bin/sub-vallHebron06/anat/sub-vallHebron06_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-vallHebron06/anat/sub-vallHebron06_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:37:01" + "Date": "2022-10-22 14:37:01", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-vallHebron06/anat/sub-vallHebron06_space-other_T1w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-vallHebron06/anat/sub-vallHebron06_space-other_T1w_desc-softseg_label-SC_seg.json index ebcdc52a0b..91c5eb3ca5 100644 --- a/derivatives/labels_softseg_bin/sub-vallHebron06/anat/sub-vallHebron06_space-other_T1w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-vallHebron06/anat/sub-vallHebron06_space-other_T1w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:37:02" + "Date": "2022-10-22 14:37:02", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-vallHebron06/anat/sub-vallHebron06_space-other_T2star_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-vallHebron06/anat/sub-vallHebron06_space-other_T2star_desc-softseg_label-SC_seg.json index ebcdc52a0b..6468d6773f 100644 --- a/derivatives/labels_softseg_bin/sub-vallHebron06/anat/sub-vallHebron06_space-other_T2star_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-vallHebron06/anat/sub-vallHebron06_space-other_T2star_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:37:02" + "Date": "2022-10-22 14:37:02", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-vallHebron06/anat/sub-vallHebron06_space-other_T2w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-vallHebron06/anat/sub-vallHebron06_space-other_T2w_desc-softseg_label-SC_seg.json index ebcdc52a0b..746e64424f 100644 --- a/derivatives/labels_softseg_bin/sub-vallHebron06/anat/sub-vallHebron06_space-other_T2w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-vallHebron06/anat/sub-vallHebron06_space-other_T2w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:37:02" + "Date": "2022-10-22 14:37:02", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-vallHebron07/anat/sub-vallHebron07_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-vallHebron07/anat/sub-vallHebron07_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json index ebcdc52a0b..d247f901de 100644 --- a/derivatives/labels_softseg_bin/sub-vallHebron07/anat/sub-vallHebron07_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-vallHebron07/anat/sub-vallHebron07_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:37:02" + "Date": "2022-10-22 14:37:02", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-vallHebron07/anat/sub-vallHebron07_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-vallHebron07/anat/sub-vallHebron07_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json index ebcdc52a0b..d247f901de 100644 --- a/derivatives/labels_softseg_bin/sub-vallHebron07/anat/sub-vallHebron07_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-vallHebron07/anat/sub-vallHebron07_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:37:02" + "Date": "2022-10-22 14:37:02", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-vallHebron07/anat/sub-vallHebron07_space-other_T1w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-vallHebron07/anat/sub-vallHebron07_space-other_T1w_desc-softseg_label-SC_seg.json index ebcdc52a0b..91c5eb3ca5 100644 --- a/derivatives/labels_softseg_bin/sub-vallHebron07/anat/sub-vallHebron07_space-other_T1w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-vallHebron07/anat/sub-vallHebron07_space-other_T1w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:37:02" + "Date": "2022-10-22 14:37:02", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-vallHebron07/anat/sub-vallHebron07_space-other_T2star_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-vallHebron07/anat/sub-vallHebron07_space-other_T2star_desc-softseg_label-SC_seg.json index ebcdc52a0b..6468d6773f 100644 --- a/derivatives/labels_softseg_bin/sub-vallHebron07/anat/sub-vallHebron07_space-other_T2star_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-vallHebron07/anat/sub-vallHebron07_space-other_T2star_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:37:02" + "Date": "2022-10-22 14:37:02", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-vallHebron07/anat/sub-vallHebron07_space-other_T2w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-vallHebron07/anat/sub-vallHebron07_space-other_T2w_desc-softseg_label-SC_seg.json index ebcdc52a0b..746e64424f 100644 --- a/derivatives/labels_softseg_bin/sub-vallHebron07/anat/sub-vallHebron07_space-other_T2w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-vallHebron07/anat/sub-vallHebron07_space-other_T2w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:37:02" + "Date": "2022-10-22 14:37:02", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-vuiisAchieva01/anat/sub-vuiisAchieva01_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-vuiisAchieva01/anat/sub-vuiisAchieva01_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json index ebcdc52a0b..d247f901de 100644 --- a/derivatives/labels_softseg_bin/sub-vuiisAchieva01/anat/sub-vuiisAchieva01_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-vuiisAchieva01/anat/sub-vuiisAchieva01_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:37:02" + "Date": "2022-10-22 14:37:02", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-vuiisAchieva01/anat/sub-vuiisAchieva01_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-vuiisAchieva01/anat/sub-vuiisAchieva01_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json index ebcdc52a0b..d247f901de 100644 --- a/derivatives/labels_softseg_bin/sub-vuiisAchieva01/anat/sub-vuiisAchieva01_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-vuiisAchieva01/anat/sub-vuiisAchieva01_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:37:02" + "Date": "2022-10-22 14:37:02", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-vuiisAchieva01/anat/sub-vuiisAchieva01_space-other_T1w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-vuiisAchieva01/anat/sub-vuiisAchieva01_space-other_T1w_desc-softseg_label-SC_seg.json index ebcdc52a0b..91c5eb3ca5 100644 --- a/derivatives/labels_softseg_bin/sub-vuiisAchieva01/anat/sub-vuiisAchieva01_space-other_T1w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-vuiisAchieva01/anat/sub-vuiisAchieva01_space-other_T1w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:37:02" + "Date": "2022-10-22 14:37:02", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-vuiisAchieva01/anat/sub-vuiisAchieva01_space-other_T2star_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-vuiisAchieva01/anat/sub-vuiisAchieva01_space-other_T2star_desc-softseg_label-SC_seg.json index ebcdc52a0b..6468d6773f 100644 --- a/derivatives/labels_softseg_bin/sub-vuiisAchieva01/anat/sub-vuiisAchieva01_space-other_T2star_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-vuiisAchieva01/anat/sub-vuiisAchieva01_space-other_T2star_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:37:02" + "Date": "2022-10-22 14:37:02", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-vuiisAchieva01/anat/sub-vuiisAchieva01_space-other_T2w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-vuiisAchieva01/anat/sub-vuiisAchieva01_space-other_T2w_desc-softseg_label-SC_seg.json index ebcdc52a0b..746e64424f 100644 --- a/derivatives/labels_softseg_bin/sub-vuiisAchieva01/anat/sub-vuiisAchieva01_space-other_T2w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-vuiisAchieva01/anat/sub-vuiisAchieva01_space-other_T2w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:37:02" + "Date": "2022-10-22 14:37:02", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-vuiisAchieva02/anat/sub-vuiisAchieva02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-vuiisAchieva02/anat/sub-vuiisAchieva02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json index ebcdc52a0b..d247f901de 100644 --- a/derivatives/labels_softseg_bin/sub-vuiisAchieva02/anat/sub-vuiisAchieva02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-vuiisAchieva02/anat/sub-vuiisAchieva02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:37:02" + "Date": "2022-10-22 14:37:02", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-vuiisAchieva02/anat/sub-vuiisAchieva02_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-vuiisAchieva02/anat/sub-vuiisAchieva02_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json index ebcdc52a0b..d247f901de 100644 --- a/derivatives/labels_softseg_bin/sub-vuiisAchieva02/anat/sub-vuiisAchieva02_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-vuiisAchieva02/anat/sub-vuiisAchieva02_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:37:02" + "Date": "2022-10-22 14:37:02", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-vuiisAchieva02/anat/sub-vuiisAchieva02_space-other_T1w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-vuiisAchieva02/anat/sub-vuiisAchieva02_space-other_T1w_desc-softseg_label-SC_seg.json index ebcdc52a0b..91c5eb3ca5 100644 --- a/derivatives/labels_softseg_bin/sub-vuiisAchieva02/anat/sub-vuiisAchieva02_space-other_T1w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-vuiisAchieva02/anat/sub-vuiisAchieva02_space-other_T1w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:37:02" + "Date": "2022-10-22 14:37:02", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-vuiisAchieva02/anat/sub-vuiisAchieva02_space-other_T2star_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-vuiisAchieva02/anat/sub-vuiisAchieva02_space-other_T2star_desc-softseg_label-SC_seg.json index ebcdc52a0b..6468d6773f 100644 --- a/derivatives/labels_softseg_bin/sub-vuiisAchieva02/anat/sub-vuiisAchieva02_space-other_T2star_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-vuiisAchieva02/anat/sub-vuiisAchieva02_space-other_T2star_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:37:02" + "Date": "2022-10-22 14:37:02", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-vuiisAchieva02/anat/sub-vuiisAchieva02_space-other_T2w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-vuiisAchieva02/anat/sub-vuiisAchieva02_space-other_T2w_desc-softseg_label-SC_seg.json index ebcdc52a0b..746e64424f 100644 --- a/derivatives/labels_softseg_bin/sub-vuiisAchieva02/anat/sub-vuiisAchieva02_space-other_T2w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-vuiisAchieva02/anat/sub-vuiisAchieva02_space-other_T2w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:37:02" + "Date": "2022-10-22 14:37:02", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-vuiisAchieva03/anat/sub-vuiisAchieva03_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-vuiisAchieva03/anat/sub-vuiisAchieva03_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json index ebcdc52a0b..d247f901de 100644 --- a/derivatives/labels_softseg_bin/sub-vuiisAchieva03/anat/sub-vuiisAchieva03_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-vuiisAchieva03/anat/sub-vuiisAchieva03_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:37:02" + "Date": "2022-10-22 14:37:02", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-vuiisAchieva03/anat/sub-vuiisAchieva03_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-vuiisAchieva03/anat/sub-vuiisAchieva03_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json index ebcdc52a0b..d247f901de 100644 --- a/derivatives/labels_softseg_bin/sub-vuiisAchieva03/anat/sub-vuiisAchieva03_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-vuiisAchieva03/anat/sub-vuiisAchieva03_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:37:02" + "Date": "2022-10-22 14:37:02", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-vuiisAchieva03/anat/sub-vuiisAchieva03_space-other_T1w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-vuiisAchieva03/anat/sub-vuiisAchieva03_space-other_T1w_desc-softseg_label-SC_seg.json index d5ddbff332..2ccbfcf9f6 100644 --- a/derivatives/labels_softseg_bin/sub-vuiisAchieva03/anat/sub-vuiisAchieva03_space-other_T1w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-vuiisAchieva03/anat/sub-vuiisAchieva03_space-other_T1w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:37:03" + "Date": "2022-10-22 14:37:03", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-vuiisAchieva03/anat/sub-vuiisAchieva03_space-other_T2star_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-vuiisAchieva03/anat/sub-vuiisAchieva03_space-other_T2star_desc-softseg_label-SC_seg.json index d5ddbff332..053bd33493 100644 --- a/derivatives/labels_softseg_bin/sub-vuiisAchieva03/anat/sub-vuiisAchieva03_space-other_T2star_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-vuiisAchieva03/anat/sub-vuiisAchieva03_space-other_T2star_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:37:03" + "Date": "2022-10-22 14:37:03", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-vuiisAchieva03/anat/sub-vuiisAchieva03_space-other_T2w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-vuiisAchieva03/anat/sub-vuiisAchieva03_space-other_T2w_desc-softseg_label-SC_seg.json index d5ddbff332..9debc010f6 100644 --- a/derivatives/labels_softseg_bin/sub-vuiisAchieva03/anat/sub-vuiisAchieva03_space-other_T2w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-vuiisAchieva03/anat/sub-vuiisAchieva03_space-other_T2w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:37:03" + "Date": "2022-10-22 14:37:03", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-vuiisAchieva04/anat/sub-vuiisAchieva04_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-vuiisAchieva04/anat/sub-vuiisAchieva04_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json index d5ddbff332..0808d265ac 100644 --- a/derivatives/labels_softseg_bin/sub-vuiisAchieva04/anat/sub-vuiisAchieva04_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-vuiisAchieva04/anat/sub-vuiisAchieva04_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:37:03" + "Date": "2022-10-22 14:37:03", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-vuiisAchieva04/anat/sub-vuiisAchieva04_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-vuiisAchieva04/anat/sub-vuiisAchieva04_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json index d5ddbff332..0808d265ac 100644 --- a/derivatives/labels_softseg_bin/sub-vuiisAchieva04/anat/sub-vuiisAchieva04_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-vuiisAchieva04/anat/sub-vuiisAchieva04_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:37:03" + "Date": "2022-10-22 14:37:03", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-vuiisAchieva04/anat/sub-vuiisAchieva04_space-other_T1w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-vuiisAchieva04/anat/sub-vuiisAchieva04_space-other_T1w_desc-softseg_label-SC_seg.json index d5ddbff332..2ccbfcf9f6 100644 --- a/derivatives/labels_softseg_bin/sub-vuiisAchieva04/anat/sub-vuiisAchieva04_space-other_T1w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-vuiisAchieva04/anat/sub-vuiisAchieva04_space-other_T1w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:37:03" + "Date": "2022-10-22 14:37:03", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-vuiisAchieva04/anat/sub-vuiisAchieva04_space-other_T2star_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-vuiisAchieva04/anat/sub-vuiisAchieva04_space-other_T2star_desc-softseg_label-SC_seg.json index d5ddbff332..053bd33493 100644 --- a/derivatives/labels_softseg_bin/sub-vuiisAchieva04/anat/sub-vuiisAchieva04_space-other_T2star_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-vuiisAchieva04/anat/sub-vuiisAchieva04_space-other_T2star_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:37:03" + "Date": "2022-10-22 14:37:03", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-vuiisAchieva04/anat/sub-vuiisAchieva04_space-other_T2w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-vuiisAchieva04/anat/sub-vuiisAchieva04_space-other_T2w_desc-softseg_label-SC_seg.json index d5ddbff332..9debc010f6 100644 --- a/derivatives/labels_softseg_bin/sub-vuiisAchieva04/anat/sub-vuiisAchieva04_space-other_T2w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-vuiisAchieva04/anat/sub-vuiisAchieva04_space-other_T2w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:37:03" + "Date": "2022-10-22 14:37:03", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-vuiisAchieva05/anat/sub-vuiisAchieva05_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-vuiisAchieva05/anat/sub-vuiisAchieva05_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json index d5ddbff332..0808d265ac 100644 --- a/derivatives/labels_softseg_bin/sub-vuiisAchieva05/anat/sub-vuiisAchieva05_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-vuiisAchieva05/anat/sub-vuiisAchieva05_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:37:03" + "Date": "2022-10-22 14:37:03", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-vuiisAchieva05/anat/sub-vuiisAchieva05_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-vuiisAchieva05/anat/sub-vuiisAchieva05_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json index d5ddbff332..0808d265ac 100644 --- a/derivatives/labels_softseg_bin/sub-vuiisAchieva05/anat/sub-vuiisAchieva05_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-vuiisAchieva05/anat/sub-vuiisAchieva05_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:37:03" + "Date": "2022-10-22 14:37:03", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-vuiisAchieva05/anat/sub-vuiisAchieva05_space-other_T1w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-vuiisAchieva05/anat/sub-vuiisAchieva05_space-other_T1w_desc-softseg_label-SC_seg.json index d5ddbff332..2ccbfcf9f6 100644 --- a/derivatives/labels_softseg_bin/sub-vuiisAchieva05/anat/sub-vuiisAchieva05_space-other_T1w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-vuiisAchieva05/anat/sub-vuiisAchieva05_space-other_T1w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:37:03" + "Date": "2022-10-22 14:37:03", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-vuiisAchieva05/anat/sub-vuiisAchieva05_space-other_T2star_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-vuiisAchieva05/anat/sub-vuiisAchieva05_space-other_T2star_desc-softseg_label-SC_seg.json index d5ddbff332..053bd33493 100644 --- a/derivatives/labels_softseg_bin/sub-vuiisAchieva05/anat/sub-vuiisAchieva05_space-other_T2star_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-vuiisAchieva05/anat/sub-vuiisAchieva05_space-other_T2star_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:37:03" + "Date": "2022-10-22 14:37:03", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-vuiisAchieva05/anat/sub-vuiisAchieva05_space-other_T2w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-vuiisAchieva05/anat/sub-vuiisAchieva05_space-other_T2w_desc-softseg_label-SC_seg.json index d5ddbff332..9debc010f6 100644 --- a/derivatives/labels_softseg_bin/sub-vuiisAchieva05/anat/sub-vuiisAchieva05_space-other_T2w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-vuiisAchieva05/anat/sub-vuiisAchieva05_space-other_T2w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:37:03" + "Date": "2022-10-22 14:37:03", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-vuiisAchieva06/anat/sub-vuiisAchieva06_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-vuiisAchieva06/anat/sub-vuiisAchieva06_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json index d5ddbff332..0808d265ac 100644 --- a/derivatives/labels_softseg_bin/sub-vuiisAchieva06/anat/sub-vuiisAchieva06_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-vuiisAchieva06/anat/sub-vuiisAchieva06_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:37:03" + "Date": "2022-10-22 14:37:03", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-vuiisAchieva06/anat/sub-vuiisAchieva06_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-vuiisAchieva06/anat/sub-vuiisAchieva06_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json index d5ddbff332..0808d265ac 100644 --- a/derivatives/labels_softseg_bin/sub-vuiisAchieva06/anat/sub-vuiisAchieva06_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-vuiisAchieva06/anat/sub-vuiisAchieva06_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:37:03" + "Date": "2022-10-22 14:37:03", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-vuiisAchieva06/anat/sub-vuiisAchieva06_space-other_T1w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-vuiisAchieva06/anat/sub-vuiisAchieva06_space-other_T1w_desc-softseg_label-SC_seg.json index d5ddbff332..2ccbfcf9f6 100644 --- a/derivatives/labels_softseg_bin/sub-vuiisAchieva06/anat/sub-vuiisAchieva06_space-other_T1w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-vuiisAchieva06/anat/sub-vuiisAchieva06_space-other_T1w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:37:03" + "Date": "2022-10-22 14:37:03", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-vuiisAchieva06/anat/sub-vuiisAchieva06_space-other_T2star_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-vuiisAchieva06/anat/sub-vuiisAchieva06_space-other_T2star_desc-softseg_label-SC_seg.json index d5ddbff332..053bd33493 100644 --- a/derivatives/labels_softseg_bin/sub-vuiisAchieva06/anat/sub-vuiisAchieva06_space-other_T2star_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-vuiisAchieva06/anat/sub-vuiisAchieva06_space-other_T2star_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:37:03" + "Date": "2022-10-22 14:37:03", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-vuiisAchieva06/anat/sub-vuiisAchieva06_space-other_T2w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-vuiisAchieva06/anat/sub-vuiisAchieva06_space-other_T2w_desc-softseg_label-SC_seg.json index d5ddbff332..9debc010f6 100644 --- a/derivatives/labels_softseg_bin/sub-vuiisAchieva06/anat/sub-vuiisAchieva06_space-other_T2w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-vuiisAchieva06/anat/sub-vuiisAchieva06_space-other_T2w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:37:03" + "Date": "2022-10-22 14:37:03", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-vuiisIngenia01/anat/sub-vuiisIngenia01_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-vuiisIngenia01/anat/sub-vuiisIngenia01_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json index d5ddbff332..0808d265ac 100644 --- a/derivatives/labels_softseg_bin/sub-vuiisIngenia01/anat/sub-vuiisIngenia01_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-vuiisIngenia01/anat/sub-vuiisIngenia01_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:37:03" + "Date": "2022-10-22 14:37:03", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-vuiisIngenia01/anat/sub-vuiisIngenia01_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-vuiisIngenia01/anat/sub-vuiisIngenia01_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json index d5ddbff332..0808d265ac 100644 --- a/derivatives/labels_softseg_bin/sub-vuiisIngenia01/anat/sub-vuiisIngenia01_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-vuiisIngenia01/anat/sub-vuiisIngenia01_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:37:03" + "Date": "2022-10-22 14:37:03", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-vuiisIngenia01/anat/sub-vuiisIngenia01_space-other_T1w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-vuiisIngenia01/anat/sub-vuiisIngenia01_space-other_T1w_desc-softseg_label-SC_seg.json index 0fba8397cb..89f0f0d48e 100644 --- a/derivatives/labels_softseg_bin/sub-vuiisIngenia01/anat/sub-vuiisIngenia01_space-other_T1w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-vuiisIngenia01/anat/sub-vuiisIngenia01_space-other_T1w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:37:04" + "Date": "2022-10-22 14:37:04", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-vuiisIngenia01/anat/sub-vuiisIngenia01_space-other_T2star_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-vuiisIngenia01/anat/sub-vuiisIngenia01_space-other_T2star_desc-softseg_label-SC_seg.json index 0fba8397cb..8f988385da 100644 --- a/derivatives/labels_softseg_bin/sub-vuiisIngenia01/anat/sub-vuiisIngenia01_space-other_T2star_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-vuiisIngenia01/anat/sub-vuiisIngenia01_space-other_T2star_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:37:04" + "Date": "2022-10-22 14:37:04", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-vuiisIngenia01/anat/sub-vuiisIngenia01_space-other_T2w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-vuiisIngenia01/anat/sub-vuiisIngenia01_space-other_T2w_desc-softseg_label-SC_seg.json index 0fba8397cb..1237335345 100644 --- a/derivatives/labels_softseg_bin/sub-vuiisIngenia01/anat/sub-vuiisIngenia01_space-other_T2w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-vuiisIngenia01/anat/sub-vuiisIngenia01_space-other_T2w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:37:04" + "Date": "2022-10-22 14:37:04", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-vuiisIngenia02/anat/sub-vuiisIngenia02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-vuiisIngenia02/anat/sub-vuiisIngenia02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json index 0fba8397cb..6823e6c48b 100644 --- a/derivatives/labels_softseg_bin/sub-vuiisIngenia02/anat/sub-vuiisIngenia02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-vuiisIngenia02/anat/sub-vuiisIngenia02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:37:04" + "Date": "2022-10-22 14:37:04", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-vuiisIngenia02/anat/sub-vuiisIngenia02_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-vuiisIngenia02/anat/sub-vuiisIngenia02_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json index 0fba8397cb..6823e6c48b 100644 --- a/derivatives/labels_softseg_bin/sub-vuiisIngenia02/anat/sub-vuiisIngenia02_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-vuiisIngenia02/anat/sub-vuiisIngenia02_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:37:04" + "Date": "2022-10-22 14:37:04", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-vuiisIngenia02/anat/sub-vuiisIngenia02_space-other_T1w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-vuiisIngenia02/anat/sub-vuiisIngenia02_space-other_T1w_desc-softseg_label-SC_seg.json index 0fba8397cb..89f0f0d48e 100644 --- a/derivatives/labels_softseg_bin/sub-vuiisIngenia02/anat/sub-vuiisIngenia02_space-other_T1w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-vuiisIngenia02/anat/sub-vuiisIngenia02_space-other_T1w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:37:04" + "Date": "2022-10-22 14:37:04", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-vuiisIngenia02/anat/sub-vuiisIngenia02_space-other_T2star_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-vuiisIngenia02/anat/sub-vuiisIngenia02_space-other_T2star_desc-softseg_label-SC_seg.json index 0fba8397cb..8f988385da 100644 --- a/derivatives/labels_softseg_bin/sub-vuiisIngenia02/anat/sub-vuiisIngenia02_space-other_T2star_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-vuiisIngenia02/anat/sub-vuiisIngenia02_space-other_T2star_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:37:04" + "Date": "2022-10-22 14:37:04", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-vuiisIngenia02/anat/sub-vuiisIngenia02_space-other_T2w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-vuiisIngenia02/anat/sub-vuiisIngenia02_space-other_T2w_desc-softseg_label-SC_seg.json index 0fba8397cb..1237335345 100644 --- a/derivatives/labels_softseg_bin/sub-vuiisIngenia02/anat/sub-vuiisIngenia02_space-other_T2w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-vuiisIngenia02/anat/sub-vuiisIngenia02_space-other_T2w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:37:04" + "Date": "2022-10-22 14:37:04", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-vuiisIngenia03/anat/sub-vuiisIngenia03_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-vuiisIngenia03/anat/sub-vuiisIngenia03_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json index 0fba8397cb..6823e6c48b 100644 --- a/derivatives/labels_softseg_bin/sub-vuiisIngenia03/anat/sub-vuiisIngenia03_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-vuiisIngenia03/anat/sub-vuiisIngenia03_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:37:04" + "Date": "2022-10-22 14:37:04", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-vuiisIngenia03/anat/sub-vuiisIngenia03_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-vuiisIngenia03/anat/sub-vuiisIngenia03_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json index 0fba8397cb..6823e6c48b 100644 --- a/derivatives/labels_softseg_bin/sub-vuiisIngenia03/anat/sub-vuiisIngenia03_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-vuiisIngenia03/anat/sub-vuiisIngenia03_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:37:04" + "Date": "2022-10-22 14:37:04", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-vuiisIngenia03/anat/sub-vuiisIngenia03_space-other_T1w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-vuiisIngenia03/anat/sub-vuiisIngenia03_space-other_T1w_desc-softseg_label-SC_seg.json index 0fba8397cb..89f0f0d48e 100644 --- a/derivatives/labels_softseg_bin/sub-vuiisIngenia03/anat/sub-vuiisIngenia03_space-other_T1w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-vuiisIngenia03/anat/sub-vuiisIngenia03_space-other_T1w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:37:04" + "Date": "2022-10-22 14:37:04", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-vuiisIngenia03/anat/sub-vuiisIngenia03_space-other_T2star_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-vuiisIngenia03/anat/sub-vuiisIngenia03_space-other_T2star_desc-softseg_label-SC_seg.json index 0fba8397cb..8f988385da 100644 --- a/derivatives/labels_softseg_bin/sub-vuiisIngenia03/anat/sub-vuiisIngenia03_space-other_T2star_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-vuiisIngenia03/anat/sub-vuiisIngenia03_space-other_T2star_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:37:04" + "Date": "2022-10-22 14:37:04", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-vuiisIngenia03/anat/sub-vuiisIngenia03_space-other_T2w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-vuiisIngenia03/anat/sub-vuiisIngenia03_space-other_T2w_desc-softseg_label-SC_seg.json index 0fba8397cb..1237335345 100644 --- a/derivatives/labels_softseg_bin/sub-vuiisIngenia03/anat/sub-vuiisIngenia03_space-other_T2w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-vuiisIngenia03/anat/sub-vuiisIngenia03_space-other_T2w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:37:04" + "Date": "2022-10-22 14:37:04", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-vuiisIngenia04/anat/sub-vuiisIngenia04_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-vuiisIngenia04/anat/sub-vuiisIngenia04_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json index 0fba8397cb..6823e6c48b 100644 --- a/derivatives/labels_softseg_bin/sub-vuiisIngenia04/anat/sub-vuiisIngenia04_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-vuiisIngenia04/anat/sub-vuiisIngenia04_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:37:04" + "Date": "2022-10-22 14:37:04", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-vuiisIngenia04/anat/sub-vuiisIngenia04_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-vuiisIngenia04/anat/sub-vuiisIngenia04_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json index 0fba8397cb..6823e6c48b 100644 --- a/derivatives/labels_softseg_bin/sub-vuiisIngenia04/anat/sub-vuiisIngenia04_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-vuiisIngenia04/anat/sub-vuiisIngenia04_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:37:04" + "Date": "2022-10-22 14:37:04", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-vuiisIngenia04/anat/sub-vuiisIngenia04_space-other_T1w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-vuiisIngenia04/anat/sub-vuiisIngenia04_space-other_T1w_desc-softseg_label-SC_seg.json index 0fba8397cb..89f0f0d48e 100644 --- a/derivatives/labels_softseg_bin/sub-vuiisIngenia04/anat/sub-vuiisIngenia04_space-other_T1w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-vuiisIngenia04/anat/sub-vuiisIngenia04_space-other_T1w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:37:04" + "Date": "2022-10-22 14:37:04", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-vuiisIngenia04/anat/sub-vuiisIngenia04_space-other_T2star_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-vuiisIngenia04/anat/sub-vuiisIngenia04_space-other_T2star_desc-softseg_label-SC_seg.json index 0fba8397cb..8f988385da 100644 --- a/derivatives/labels_softseg_bin/sub-vuiisIngenia04/anat/sub-vuiisIngenia04_space-other_T2star_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-vuiisIngenia04/anat/sub-vuiisIngenia04_space-other_T2star_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:37:04" + "Date": "2022-10-22 14:37:04", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-vuiisIngenia04/anat/sub-vuiisIngenia04_space-other_T2w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-vuiisIngenia04/anat/sub-vuiisIngenia04_space-other_T2w_desc-softseg_label-SC_seg.json index 0fba8397cb..1237335345 100644 --- a/derivatives/labels_softseg_bin/sub-vuiisIngenia04/anat/sub-vuiisIngenia04_space-other_T2w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-vuiisIngenia04/anat/sub-vuiisIngenia04_space-other_T2w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:37:04" + "Date": "2022-10-22 14:37:04", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-vuiisIngenia05/anat/sub-vuiisIngenia05_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-vuiisIngenia05/anat/sub-vuiisIngenia05_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json index 0fba8397cb..6823e6c48b 100644 --- a/derivatives/labels_softseg_bin/sub-vuiisIngenia05/anat/sub-vuiisIngenia05_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-vuiisIngenia05/anat/sub-vuiisIngenia05_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:37:04" + "Date": "2022-10-22 14:37:04", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-vuiisIngenia05/anat/sub-vuiisIngenia05_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-vuiisIngenia05/anat/sub-vuiisIngenia05_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json index 0fba8397cb..6823e6c48b 100644 --- a/derivatives/labels_softseg_bin/sub-vuiisIngenia05/anat/sub-vuiisIngenia05_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-vuiisIngenia05/anat/sub-vuiisIngenia05_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:37:04" + "Date": "2022-10-22 14:37:04", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-vuiisIngenia05/anat/sub-vuiisIngenia05_space-other_T1w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-vuiisIngenia05/anat/sub-vuiisIngenia05_space-other_T1w_desc-softseg_label-SC_seg.json index 8c4ed7b180..7646dd501d 100644 --- a/derivatives/labels_softseg_bin/sub-vuiisIngenia05/anat/sub-vuiisIngenia05_space-other_T1w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-vuiisIngenia05/anat/sub-vuiisIngenia05_space-other_T1w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:37:05" + "Date": "2022-10-22 14:37:05", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-vuiisIngenia05/anat/sub-vuiisIngenia05_space-other_T2star_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-vuiisIngenia05/anat/sub-vuiisIngenia05_space-other_T2star_desc-softseg_label-SC_seg.json index 8c4ed7b180..f106b68fac 100644 --- a/derivatives/labels_softseg_bin/sub-vuiisIngenia05/anat/sub-vuiisIngenia05_space-other_T2star_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-vuiisIngenia05/anat/sub-vuiisIngenia05_space-other_T2star_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:37:05" + "Date": "2022-10-22 14:37:05", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-vuiisIngenia05/anat/sub-vuiisIngenia05_space-other_T2w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-vuiisIngenia05/anat/sub-vuiisIngenia05_space-other_T2w_desc-softseg_label-SC_seg.json index 8c4ed7b180..eaf03bec4c 100644 --- a/derivatives/labels_softseg_bin/sub-vuiisIngenia05/anat/sub-vuiisIngenia05_space-other_T2w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-vuiisIngenia05/anat/sub-vuiisIngenia05_space-other_T2w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:37:05" + "Date": "2022-10-22 14:37:05", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-vuiisIngenia06/anat/sub-vuiisIngenia06_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-vuiisIngenia06/anat/sub-vuiisIngenia06_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json index 8c4ed7b180..3ed004d900 100644 --- a/derivatives/labels_softseg_bin/sub-vuiisIngenia06/anat/sub-vuiisIngenia06_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-vuiisIngenia06/anat/sub-vuiisIngenia06_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:37:05" + "Date": "2022-10-22 14:37:05", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-vuiisIngenia06/anat/sub-vuiisIngenia06_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-vuiisIngenia06/anat/sub-vuiisIngenia06_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json index 8c4ed7b180..3ed004d900 100644 --- a/derivatives/labels_softseg_bin/sub-vuiisIngenia06/anat/sub-vuiisIngenia06_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-vuiisIngenia06/anat/sub-vuiisIngenia06_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.json @@ -1,4 +1,7 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:37:05" + "Date": "2022-10-22 14:37:05", + "SpatialReference": { + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-vuiisIngenia06/anat/sub-vuiisIngenia06_space-other_T1w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-vuiisIngenia06/anat/sub-vuiisIngenia06_space-other_T1w_desc-softseg_label-SC_seg.json index 8c4ed7b180..7646dd501d 100644 --- a/derivatives/labels_softseg_bin/sub-vuiisIngenia06/anat/sub-vuiisIngenia06_space-other_T1w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-vuiisIngenia06/anat/sub-vuiisIngenia06_space-other_T1w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:37:05" + "Date": "2022-10-22 14:37:05", + "SpatialReference": { + "Resampling": "1x1x1", + "Reorientation": "RPI" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-vuiisIngenia06/anat/sub-vuiisIngenia06_space-other_T2star_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-vuiisIngenia06/anat/sub-vuiisIngenia06_space-other_T2star_desc-softseg_label-SC_seg.json index 8c4ed7b180..f106b68fac 100644 --- a/derivatives/labels_softseg_bin/sub-vuiisIngenia06/anat/sub-vuiisIngenia06_space-other_T2star_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-vuiisIngenia06/anat/sub-vuiisIngenia06_space-other_T2star_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:37:05" + "Date": "2022-10-22 14:37:05", + "SpatialReference": { + "Reorientation": "RPI", + "Other": "root-mean square across 4th dimension (if it exists)" + } } \ No newline at end of file diff --git a/derivatives/labels_softseg_bin/sub-vuiisIngenia06/anat/sub-vuiisIngenia06_space-other_T2w_desc-softseg_label-SC_seg.json b/derivatives/labels_softseg_bin/sub-vuiisIngenia06/anat/sub-vuiisIngenia06_space-other_T2w_desc-softseg_label-SC_seg.json index 8c4ed7b180..eaf03bec4c 100644 --- a/derivatives/labels_softseg_bin/sub-vuiisIngenia06/anat/sub-vuiisIngenia06_space-other_T2w_desc-softseg_label-SC_seg.json +++ b/derivatives/labels_softseg_bin/sub-vuiisIngenia06/anat/sub-vuiisIngenia06_space-other_T2w_desc-softseg_label-SC_seg.json @@ -1,4 +1,8 @@ { "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:37:05" + "Date": "2022-10-22 14:37:05", + "SpatialReference": { + "Resampling": "0.8x0.8x0.8", + "Reorientation": "RPI" + } } \ No newline at end of file From aa213c21f5eb31f54cc62d729f15347d18384764 Mon Sep 17 00:00:00 2001 From: Sandrine Bedard Date: Mon, 19 Feb 2024 16:18:44 -0500 Subject: [PATCH 07/21] remove space-other for disc labels --- ...l.json => sub-amu01_T1w_label-discs_dlabel.json} | 0 ...i.gz => sub-amu01_T1w_label-discs_dlabel.nii.gz} | 0 ...-amu01_T2star_label-discs_desc-warp_dlabel.json} | 3 --- ...mu01_T2star_label-discs_desc-warp_dlabel.nii.gz} | 0 ...l.json => sub-amu01_T2w_label-discs_dlabel.json} | 0 ...i.gz => sub-amu01_T2w_label-discs_dlabel.nii.gz} | 0 ...p-1_mt-on_MTS_label-discs_desc-warp_dlabel.json} | 3 --- ...1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...-2_mt-off_MTS_label-discs_desc-warp_dlabel.json} | 3 --- ..._mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...sub-amu01_space-other_T2star_label-SC_seg.nii.gz | 2 +- ...l.json => sub-amu02_T1w_label-discs_dlabel.json} | 0 ...i.gz => sub-amu02_T1w_label-discs_dlabel.nii.gz} | 0 ...-amu02_T2star_label-discs_desc-warp_dlabel.json} | 3 --- ...mu02_T2star_label-discs_desc-warp_dlabel.nii.gz} | 0 ...l.json => sub-amu02_T2w_label-discs_dlabel.json} | 0 ...i.gz => sub-amu02_T2w_label-discs_dlabel.nii.gz} | 0 ...ip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...p-2_mt-off_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ..._mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...-other_T1w_label-vertebrae_desc-C2C5_dlabel.json | 11 +++++++++++ ...her_T1w_label-vertebrae_desc-C2C5_dlabel.nii.gz} | 0 ...sub-amu02_space-other_T2star_label-SC_seg.nii.gz | 2 +- ...e-other_T2star_label-discs_desc-warp_dlabel.json | 12 ------------ ...l.json => sub-amu03_T1w_label-discs_dlabel.json} | 0 ...i.gz => sub-amu03_T1w_label-discs_dlabel.nii.gz} | 0 ...b-amu03_T2star_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...mu03_T2star_label-discs_desc-warp_dlabel.nii.gz} | 0 ...l.json => sub-amu03_T2w_label-discs_dlabel.json} | 0 ...i.gz => sub-amu03_T2w_label-discs_dlabel.nii.gz} | 0 ...ip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...p-2_mt-off_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ..._mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...sub-amu03_space-other_T2star_label-SC_seg.nii.gz | 2 +- ...e-other_T2star_label-discs_desc-warp_dlabel.json | 12 ------------ ...l.json => sub-amu04_T1w_label-discs_dlabel.json} | 0 ...i.gz => sub-amu04_T1w_label-discs_dlabel.nii.gz} | 0 ...b-amu04_T2star_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...mu04_T2star_label-discs_desc-warp_dlabel.nii.gz} | 0 ...l.json => sub-amu04_T2w_label-discs_dlabel.json} | 0 ...i.gz => sub-amu04_T2w_label-discs_dlabel.nii.gz} | 0 ...ip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...p-2_mt-off_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ..._mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...-other_T1w_label-vertebrae_desc-C2C5_dlabel.json | 11 +++++++++++ ...her_T1w_label-vertebrae_desc-C2C5_dlabel.nii.gz} | 0 ...sub-amu04_space-other_T2star_label-SC_seg.nii.gz | 2 +- ...e-other_T2star_label-discs_desc-warp_dlabel.json | 12 ------------ ...l.json => sub-amu05_T1w_label-discs_dlabel.json} | 0 ...i.gz => sub-amu05_T1w_label-discs_dlabel.nii.gz} | 0 ...b-amu05_T2star_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...mu05_T2star_label-discs_desc-warp_dlabel.nii.gz} | 0 ...l.json => sub-amu05_T2w_label-discs_dlabel.json} | 0 ...i.gz => sub-amu05_T2w_label-discs_dlabel.nii.gz} | 0 ...ip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...p-2_mt-off_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ..._mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...-other_T1w_label-vertebrae_desc-C2C5_dlabel.json | 11 +++++++++++ ...her_T1w_label-vertebrae_desc-C2C5_dlabel.nii.gz} | 0 ...sub-amu05_space-other_T2star_label-SC_seg.nii.gz | 2 +- ...e-other_T2star_label-discs_desc-warp_dlabel.json | 12 ------------ ...n => sub-balgrist01_T1w_label-discs_dlabel.json} | 0 ...=> sub-balgrist01_T1w_label-discs_dlabel.nii.gz} | 0 ...grist01_T2star_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...st01_T2star_label-discs_desc-warp_dlabel.nii.gz} | 0 ...n => sub-balgrist01_T2w_label-discs_dlabel.json} | 0 ...=> sub-balgrist01_T2w_label-discs_dlabel.nii.gz} | 0 ...ip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...p-2_mt-off_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ..._mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...algrist01_space-other_T2star_label-SC_seg.nii.gz | 2 +- ...e-other_T2star_label-discs_desc-warp_dlabel.json | 12 ------------ ...n => sub-balgrist02_T1w_label-discs_dlabel.json} | 0 ...=> sub-balgrist02_T1w_label-discs_dlabel.nii.gz} | 0 ...grist02_T2star_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...st02_T2star_label-discs_desc-warp_dlabel.nii.gz} | 0 ...n => sub-balgrist02_T2w_label-discs_dlabel.json} | 0 ...=> sub-balgrist02_T2w_label-discs_dlabel.nii.gz} | 0 ...ip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...p-2_mt-off_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ..._mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...algrist02_space-other_T2star_label-SC_seg.nii.gz | 2 +- ...e-other_T2star_label-discs_desc-warp_dlabel.json | 12 ------------ ...n => sub-balgrist03_T1w_label-discs_dlabel.json} | 0 ...=> sub-balgrist03_T1w_label-discs_dlabel.nii.gz} | 0 ...grist03_T2star_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...st03_T2star_label-discs_desc-warp_dlabel.nii.gz} | 0 ...n => sub-balgrist03_T2w_label-discs_dlabel.json} | 0 ...=> sub-balgrist03_T2w_label-discs_dlabel.nii.gz} | 0 ...ip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...p-2_mt-off_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ..._mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...algrist03_space-other_T2star_label-SC_seg.nii.gz | 2 +- ...e-other_T2star_label-discs_desc-warp_dlabel.json | 12 ------------ ...n => sub-balgrist04_T1w_label-discs_dlabel.json} | 0 ...=> sub-balgrist04_T1w_label-discs_dlabel.nii.gz} | 0 ...grist04_T2star_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...st04_T2star_label-discs_desc-warp_dlabel.nii.gz} | 0 ...n => sub-balgrist04_T2w_label-discs_dlabel.json} | 0 ...=> sub-balgrist04_T2w_label-discs_dlabel.nii.gz} | 0 ...ip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...p-2_mt-off_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ..._mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...algrist04_space-other_T2star_label-SC_seg.nii.gz | 2 +- ...e-other_T2star_label-discs_desc-warp_dlabel.json | 12 ------------ ...n => sub-balgrist05_T1w_label-discs_dlabel.json} | 0 ...=> sub-balgrist05_T1w_label-discs_dlabel.nii.gz} | 0 ...grist05_T2star_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...st05_T2star_label-discs_desc-warp_dlabel.nii.gz} | 0 ...n => sub-balgrist05_T2w_label-discs_dlabel.json} | 0 ...=> sub-balgrist05_T2w_label-discs_dlabel.nii.gz} | 0 ...ip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...p-2_mt-off_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ..._mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...algrist05_space-other_T2star_label-SC_seg.nii.gz | 2 +- ...e-other_T2star_label-discs_desc-warp_dlabel.json | 12 ------------ ...n => sub-balgrist06_T1w_label-discs_dlabel.json} | 0 ...=> sub-balgrist06_T1w_label-discs_dlabel.nii.gz} | 0 ...grist06_T2star_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...st06_T2star_label-discs_desc-warp_dlabel.nii.gz} | 0 ...n => sub-balgrist06_T2w_label-discs_dlabel.json} | 0 ...=> sub-balgrist06_T2w_label-discs_dlabel.nii.gz} | 0 ...ip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...p-2_mt-off_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ..._mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...algrist06_space-other_T2star_label-SC_seg.nii.gz | 2 +- ...e-other_T2star_label-discs_desc-warp_dlabel.json | 12 ------------ ... => sub-barcelona01_T1w_label-discs_dlabel.json} | 0 ...> sub-barcelona01_T1w_label-discs_dlabel.nii.gz} | 0 ...elona01_T2star_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...na01_T2star_label-discs_desc-warp_dlabel.nii.gz} | 0 ... => sub-barcelona01_T2w_label-discs_dlabel.json} | 0 ...> sub-barcelona01_T2w_label-discs_dlabel.nii.gz} | 0 ...ip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...p-2_mt-off_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ..._mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...rcelona01_space-other_T2star_label-SC_seg.nii.gz | 2 +- ...e-other_T2star_label-discs_desc-warp_dlabel.json | 12 ------------ ... => sub-barcelona02_T1w_label-discs_dlabel.json} | 0 ...> sub-barcelona02_T1w_label-discs_dlabel.nii.gz} | 0 ...elona02_T2star_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...na02_T2star_label-discs_desc-warp_dlabel.nii.gz} | 0 ... => sub-barcelona02_T2w_label-discs_dlabel.json} | 0 ...> sub-barcelona02_T2w_label-discs_dlabel.nii.gz} | 0 ...ip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...p-2_mt-off_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ..._mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...rcelona02_space-other_T2star_label-SC_seg.nii.gz | 2 +- ...e-other_T2star_label-discs_desc-warp_dlabel.json | 12 ------------ ... => sub-barcelona03_T1w_label-discs_dlabel.json} | 0 ...> sub-barcelona03_T1w_label-discs_dlabel.nii.gz} | 0 ...elona03_T2star_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...na03_T2star_label-discs_desc-warp_dlabel.nii.gz} | 0 ... => sub-barcelona03_T2w_label-discs_dlabel.json} | 0 ...> sub-barcelona03_T2w_label-discs_dlabel.nii.gz} | 0 ...ip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...p-2_mt-off_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ..._mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...rcelona03_space-other_T2star_label-SC_seg.nii.gz | 2 +- ...e-other_T2star_label-discs_desc-warp_dlabel.json | 12 ------------ ... => sub-barcelona04_T1w_label-discs_dlabel.json} | 0 ...> sub-barcelona04_T1w_label-discs_dlabel.nii.gz} | 0 ...elona04_T2star_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...na04_T2star_label-discs_desc-warp_dlabel.nii.gz} | 0 ... => sub-barcelona04_T2w_label-discs_dlabel.json} | 0 ...> sub-barcelona04_T2w_label-discs_dlabel.nii.gz} | 0 ...ip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...p-2_mt-off_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ..._mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...rcelona04_space-other_T2star_label-SC_seg.nii.gz | 2 +- ...e-other_T2star_label-discs_desc-warp_dlabel.json | 12 ------------ ... => sub-barcelona05_T1w_label-discs_dlabel.json} | 0 ...> sub-barcelona05_T1w_label-discs_dlabel.nii.gz} | 0 ...elona05_T2star_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...na05_T2star_label-discs_desc-warp_dlabel.nii.gz} | 0 ... => sub-barcelona05_T2w_label-discs_dlabel.json} | 0 ...> sub-barcelona05_T2w_label-discs_dlabel.nii.gz} | 0 ...ip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...p-2_mt-off_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ..._mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...rcelona05_space-other_T2star_label-SC_seg.nii.gz | 2 +- ...e-other_T2star_label-discs_desc-warp_dlabel.json | 12 ------------ ...-barcelona05_space-other_T2w_label-CSF_seg.json} | 0 ...arcelona05_space-other_T2w_label-CSF_seg.nii.gz} | 0 ...barcelona05_space-other_T2w_label-canal_seg.json | 11 +++++++++++ ...rcelona05_space-other_T2w_label-canal_seg.nii.gz | 1 + ... => sub-barcelona06_T1w_label-discs_dlabel.json} | 0 ...> sub-barcelona06_T1w_label-discs_dlabel.nii.gz} | 0 ...elona06_T2star_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...na06_T2star_label-discs_desc-warp_dlabel.nii.gz} | 0 ... => sub-barcelona06_T2w_label-discs_dlabel.json} | 0 ...> sub-barcelona06_T2w_label-discs_dlabel.nii.gz} | 0 ...ip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...p-2_mt-off_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ..._mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...rcelona06_space-other_T2star_label-SC_seg.nii.gz | 2 +- ...e-other_T2star_label-discs_desc-warp_dlabel.json | 12 ------------ ... => sub-beijingGE01_T1w_label-discs_dlabel.json} | 0 ...> sub-beijingGE01_T1w_label-discs_dlabel.nii.gz} | 0 ... => sub-beijingGE01_T2w_label-discs_dlabel.json} | 0 ...> sub-beijingGE01_T2w_label-discs_dlabel.nii.gz} | 0 ...ijingGE01_space-other_T2star_label-SC_seg.nii.gz | 2 +- ... => sub-beijingGE02_T1w_label-discs_dlabel.json} | 0 ...> sub-beijingGE02_T1w_label-discs_dlabel.nii.gz} | 0 ... => sub-beijingGE02_T2w_label-discs_dlabel.json} | 0 ...> sub-beijingGE02_T2w_label-discs_dlabel.nii.gz} | 0 ...ijingGE02_space-other_T2star_label-SC_seg.nii.gz | 2 +- ... => sub-beijingGE03_T1w_label-discs_dlabel.json} | 0 ...> sub-beijingGE03_T1w_label-discs_dlabel.nii.gz} | 0 ... => sub-beijingGE03_T2w_label-discs_dlabel.json} | 0 ...> sub-beijingGE03_T2w_label-discs_dlabel.nii.gz} | 0 ...ijingGE03_space-other_T2star_label-SC_seg.nii.gz | 2 +- ... => sub-beijingGE04_T1w_label-discs_dlabel.json} | 0 ...> sub-beijingGE04_T1w_label-discs_dlabel.nii.gz} | 0 ... => sub-beijingGE04_T2w_label-discs_dlabel.json} | 0 ...> sub-beijingGE04_T2w_label-discs_dlabel.nii.gz} | 0 ...sub-beijingPrisma01_T1w_label-discs_dlabel.json} | 0 ...b-beijingPrisma01_T1w_label-discs_dlabel.nii.gz} | 0 ...risma01_T2star_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...ma01_T2star_label-discs_desc-warp_dlabel.nii.gz} | 0 ...sub-beijingPrisma01_T2w_label-discs_dlabel.json} | 0 ...b-beijingPrisma01_T2w_label-discs_dlabel.nii.gz} | 0 ...ip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...p-2_mt-off_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ..._mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...gPrisma01_space-other_T2star_label-SC_seg.nii.gz | 2 +- ...e-other_T2star_label-discs_desc-warp_dlabel.json | 12 ------------ ...sub-beijingPrisma02_T1w_label-discs_dlabel.json} | 0 ...b-beijingPrisma02_T1w_label-discs_dlabel.nii.gz} | 0 ...risma02_T2star_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...ma02_T2star_label-discs_desc-warp_dlabel.nii.gz} | 0 ...sub-beijingPrisma02_T2w_label-discs_dlabel.json} | 0 ...b-beijingPrisma02_T2w_label-discs_dlabel.nii.gz} | 0 ...ip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...p-2_mt-off_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ..._mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...gPrisma02_space-other_T2star_label-SC_seg.nii.gz | 2 +- ...e-other_T2star_label-discs_desc-warp_dlabel.json | 12 ------------ ...sub-beijingPrisma03_T1w_label-discs_dlabel.json} | 0 ...b-beijingPrisma03_T1w_label-discs_dlabel.nii.gz} | 0 ...risma03_T2star_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...ma03_T2star_label-discs_desc-warp_dlabel.nii.gz} | 0 ...sub-beijingPrisma03_T2w_label-discs_dlabel.json} | 0 ...b-beijingPrisma03_T2w_label-discs_dlabel.nii.gz} | 0 ...ip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...p-2_mt-off_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ..._mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...gPrisma03_space-other_T2star_label-SC_seg.nii.gz | 2 +- ...e-other_T2star_label-discs_desc-warp_dlabel.json | 12 ------------ ...sub-beijingPrisma04_T1w_label-discs_dlabel.json} | 0 ...b-beijingPrisma04_T1w_label-discs_dlabel.nii.gz} | 0 ...risma04_T2star_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...ma04_T2star_label-discs_desc-warp_dlabel.nii.gz} | 0 ...sub-beijingPrisma04_T2w_label-discs_dlabel.json} | 0 ...b-beijingPrisma04_T2w_label-discs_dlabel.nii.gz} | 0 ...ip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...p-2_mt-off_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ..._mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...gPrisma04_space-other_T2star_label-SC_seg.nii.gz | 2 +- ...e-other_T2star_label-discs_desc-warp_dlabel.json | 12 ------------ ...sub-beijingPrisma05_T1w_label-discs_dlabel.json} | 0 ...b-beijingPrisma05_T1w_label-discs_dlabel.nii.gz} | 0 ...risma05_T2star_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...ma05_T2star_label-discs_desc-warp_dlabel.nii.gz} | 0 ...sub-beijingPrisma05_T2w_label-discs_dlabel.json} | 0 ...b-beijingPrisma05_T2w_label-discs_dlabel.nii.gz} | 0 ...ip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...p-2_mt-off_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ..._mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...gPrisma05_space-other_T2star_label-SC_seg.nii.gz | 2 +- ...e-other_T2star_label-discs_desc-warp_dlabel.json | 12 ------------ ... sub-beijingVerio01_T1w_label-discs_dlabel.json} | 0 ...ub-beijingVerio01_T1w_label-discs_dlabel.nii.gz} | 0 ... sub-beijingVerio01_T2w_label-discs_dlabel.json} | 0 ...ub-beijingVerio01_T2w_label-discs_dlabel.nii.gz} | 0 ...ngVerio01_space-other_T2star_label-SC_seg.nii.gz | 2 +- ... sub-beijingVerio02_T1w_label-discs_dlabel.json} | 0 ...ub-beijingVerio02_T1w_label-discs_dlabel.nii.gz} | 0 ... sub-beijingVerio02_T2w_label-discs_dlabel.json} | 0 ...ub-beijingVerio02_T2w_label-discs_dlabel.nii.gz} | 0 ...ngVerio02_space-other_T2star_label-SC_seg.nii.gz | 2 +- ... sub-beijingVerio03_T1w_label-discs_dlabel.json} | 0 ...ub-beijingVerio03_T1w_label-discs_dlabel.nii.gz} | 0 ... sub-beijingVerio03_T2w_label-discs_dlabel.json} | 0 ...ub-beijingVerio03_T2w_label-discs_dlabel.nii.gz} | 0 ...-other_T1w_label-vertebrae_desc-C2C5_dlabel.json | 11 +++++++++++ ...her_T1w_label-vertebrae_desc-C2C5_dlabel.nii.gz} | 0 ...ngVerio03_space-other_T2star_label-SC_seg.nii.gz | 2 +- ... sub-beijingVerio04_T1w_label-discs_dlabel.json} | 0 ...ub-beijingVerio04_T1w_label-discs_dlabel.nii.gz} | 0 ... sub-beijingVerio04_T2w_label-discs_dlabel.json} | 0 ...ub-beijingVerio04_T2w_label-discs_dlabel.nii.gz} | 0 ...ngVerio04_space-other_T2star_label-SC_seg.nii.gz | 2 +- ...=> sub-brnoCeitec01_T1w_label-discs_dlabel.json} | 0 ... sub-brnoCeitec01_T1w_label-discs_dlabel.nii.gz} | 0 ...eitec01_T2star_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...ec01_T2star_label-discs_desc-warp_dlabel.nii.gz} | 0 ...=> sub-brnoCeitec01_T2w_label-discs_dlabel.json} | 0 ... sub-brnoCeitec01_T2w_label-discs_dlabel.nii.gz} | 0 ...ip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...p-2_mt-off_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ..._mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...oCeitec01_space-other_T2star_label-SC_seg.nii.gz | 2 +- ...e-other_T2star_label-discs_desc-warp_dlabel.json | 12 ------------ ...=> sub-brnoCeitec02_T1w_label-discs_dlabel.json} | 0 ... sub-brnoCeitec02_T1w_label-discs_dlabel.nii.gz} | 0 ...eitec02_T2star_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...ec02_T2star_label-discs_desc-warp_dlabel.nii.gz} | 0 ...=> sub-brnoCeitec02_T2w_label-discs_dlabel.json} | 0 ... sub-brnoCeitec02_T2w_label-discs_dlabel.nii.gz} | 0 ...ip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...p-2_mt-off_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ..._mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...oCeitec02_space-other_T2star_label-SC_seg.nii.gz | 2 +- ...e-other_T2star_label-discs_desc-warp_dlabel.json | 12 ------------ ...=> sub-brnoCeitec03_T1w_label-discs_dlabel.json} | 0 ... sub-brnoCeitec03_T1w_label-discs_dlabel.nii.gz} | 0 ...eitec03_T2star_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...ec03_T2star_label-discs_desc-warp_dlabel.nii.gz} | 0 ...=> sub-brnoCeitec03_T2w_label-discs_dlabel.json} | 0 ... sub-brnoCeitec03_T2w_label-discs_dlabel.nii.gz} | 0 ...ip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...p-2_mt-off_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ..._mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...oCeitec03_space-other_T2star_label-SC_seg.nii.gz | 2 +- ...e-other_T2star_label-discs_desc-warp_dlabel.json | 12 ------------ ...=> sub-brnoCeitec04_T1w_label-discs_dlabel.json} | 0 ... sub-brnoCeitec04_T1w_label-discs_dlabel.nii.gz} | 0 ...eitec04_T2star_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...ec04_T2star_label-discs_desc-warp_dlabel.nii.gz} | 0 ...=> sub-brnoCeitec04_T2w_label-discs_dlabel.json} | 0 ... sub-brnoCeitec04_T2w_label-discs_dlabel.nii.gz} | 0 ...ip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...p-2_mt-off_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ..._mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...oCeitec04_space-other_T2star_label-SC_seg.nii.gz | 2 +- ...e-other_T2star_label-discs_desc-warp_dlabel.json | 12 ------------ ...=> sub-brnoCeitec05_T1w_label-discs_dlabel.json} | 0 ... sub-brnoCeitec05_T1w_label-discs_dlabel.nii.gz} | 0 ...eitec05_T2star_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...ec05_T2star_label-discs_desc-warp_dlabel.nii.gz} | 0 ...=> sub-brnoCeitec05_T2w_label-discs_dlabel.json} | 0 ... sub-brnoCeitec05_T2w_label-discs_dlabel.nii.gz} | 0 ...ip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...p-2_mt-off_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ..._mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...oCeitec05_space-other_T2star_label-SC_seg.nii.gz | 2 +- ...e-other_T2star_label-discs_desc-warp_dlabel.json | 12 ------------ ...=> sub-brnoCeitec06_T1w_label-discs_dlabel.json} | 0 ... sub-brnoCeitec06_T1w_label-discs_dlabel.nii.gz} | 0 ...eitec06_T2star_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...ec06_T2star_label-discs_desc-warp_dlabel.nii.gz} | 0 ...=> sub-brnoCeitec06_T2w_label-discs_dlabel.json} | 0 ... sub-brnoCeitec06_T2w_label-discs_dlabel.nii.gz} | 0 ...ip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...p-2_mt-off_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ..._mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...oCeitec06_space-other_T2star_label-SC_seg.nii.gz | 2 +- ...e-other_T2star_label-discs_desc-warp_dlabel.json | 12 ------------ ...on => sub-brnoUhb01_T1w_label-discs_dlabel.json} | 0 ... => sub-brnoUhb01_T1w_label-discs_dlabel.nii.gz} | 0 ...noUhb01_T2star_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...hb01_T2star_label-discs_desc-warp_dlabel.nii.gz} | 0 ...on => sub-brnoUhb01_T2w_label-discs_dlabel.json} | 0 ... => sub-brnoUhb01_T2w_label-discs_dlabel.nii.gz} | 0 ...ip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...p-2_mt-off_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ..._mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...noUhb01_space-other_T1w_RPI_r_labels-manual.json | 4 ---- ...-other_T1w_label-vertebrae_desc-C2C5_dlabel.json | 13 +++++++++++++ ...her_T1w_label-vertebrae_desc-C2C5_dlabel.nii.gz} | 0 ...brnoUhb01_space-other_T2star_label-SC_seg.nii.gz | 2 +- ...e-other_T2star_label-discs_desc-warp_dlabel.json | 12 ------------ ...on => sub-brnoUhb02_T1w_label-discs_dlabel.json} | 0 ... => sub-brnoUhb02_T1w_label-discs_dlabel.nii.gz} | 0 ...on => sub-brnoUhb02_T2w_label-discs_dlabel.json} | 0 ... => sub-brnoUhb02_T2w_label-discs_dlabel.nii.gz} | 0 ...brnoUhb02_space-other_T2star_label-SC_seg.nii.gz | 2 +- ...on => sub-brnoUhb03_T1w_label-discs_dlabel.json} | 0 ... => sub-brnoUhb03_T1w_label-discs_dlabel.nii.gz} | 0 ...on => sub-brnoUhb03_T2w_label-discs_dlabel.json} | 0 ... => sub-brnoUhb03_T2w_label-discs_dlabel.nii.gz} | 0 ...brnoUhb03_space-other_T2star_label-SC_seg.nii.gz | 2 +- ...on => sub-brnoUhb04_T1w_label-discs_dlabel.json} | 0 ... => sub-brnoUhb04_T1w_label-discs_dlabel.nii.gz} | 0 ...noUhb04_T2star_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...hb04_T2star_label-discs_desc-warp_dlabel.nii.gz} | 0 ...on => sub-brnoUhb04_T2w_label-discs_dlabel.json} | 0 ... => sub-brnoUhb04_T2w_label-discs_dlabel.nii.gz} | 0 ...ip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...p-2_mt-off_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ..._mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...brnoUhb04_space-other_T2star_label-SC_seg.nii.gz | 2 +- ...e-other_T2star_label-discs_desc-warp_dlabel.json | 12 ------------ ...on => sub-brnoUhb05_T1w_label-discs_dlabel.json} | 0 ... => sub-brnoUhb05_T1w_label-discs_dlabel.nii.gz} | 0 ...noUhb05_T2star_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...hb05_T2star_label-discs_desc-warp_dlabel.nii.gz} | 0 ...on => sub-brnoUhb05_T2w_label-discs_dlabel.json} | 0 ... => sub-brnoUhb05_T2w_label-discs_dlabel.nii.gz} | 0 ...ip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...p-2_mt-off_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ..._mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...brnoUhb05_space-other_T2star_label-SC_seg.nii.gz | 2 +- ...e-other_T2star_label-discs_desc-warp_dlabel.json | 12 ------------ ...on => sub-brnoUhb06_T1w_label-discs_dlabel.json} | 0 ... => sub-brnoUhb06_T1w_label-discs_dlabel.nii.gz} | 0 ...noUhb06_T2star_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...hb06_T2star_label-discs_desc-warp_dlabel.nii.gz} | 0 ...on => sub-brnoUhb06_T2w_label-discs_dlabel.json} | 0 ... => sub-brnoUhb06_T2w_label-discs_dlabel.nii.gz} | 0 ...ip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...p-2_mt-off_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ..._mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...brnoUhb06_space-other_T2star_label-SC_seg.nii.gz | 2 +- ...e-other_T2star_label-discs_desc-warp_dlabel.json | 12 ------------ ...on => sub-brnoUhb07_T1w_label-discs_dlabel.json} | 0 ... => sub-brnoUhb07_T1w_label-discs_dlabel.nii.gz} | 0 ...on => sub-brnoUhb07_T2w_label-discs_dlabel.json} | 0 ... => sub-brnoUhb07_T2w_label-discs_dlabel.nii.gz} | 0 ...brnoUhb07_space-other_T2star_label-SC_seg.nii.gz | 2 +- ...on => sub-brnoUhb08_T1w_label-discs_dlabel.json} | 0 ... => sub-brnoUhb08_T1w_label-discs_dlabel.nii.gz} | 0 ...on => sub-brnoUhb08_T2w_label-discs_dlabel.json} | 0 ... => sub-brnoUhb08_T2w_label-discs_dlabel.nii.gz} | 0 ...noUhb08_space-other_T1w_RPI_r_labels-manual.json | 4 ---- ...-other_T1w_label-vertebrae_desc-C2C5_dlabel.json | 13 +++++++++++++ ...her_T1w_label-vertebrae_desc-C2C5_dlabel.nii.gz} | 0 ...brnoUhb08_space-other_T2star_label-SC_seg.nii.gz | 2 +- ...on => sub-cardiff01_T1w_label-discs_dlabel.json} | 0 ... => sub-cardiff01_T1w_label-discs_dlabel.nii.gz} | 0 ...rdiff01_T2star_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...ff01_T2star_label-discs_desc-warp_dlabel.nii.gz} | 0 ...on => sub-cardiff01_T2w_label-discs_dlabel.json} | 0 ... => sub-cardiff01_T2w_label-discs_dlabel.nii.gz} | 0 ...ip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...p-2_mt-off_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ..._mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...cardiff01_space-other_T2star_label-SC_seg.nii.gz | 2 +- ...e-other_T2star_label-discs_desc-warp_dlabel.json | 12 ------------ ...on => sub-cardiff02_T1w_label-discs_dlabel.json} | 0 ... => sub-cardiff02_T1w_label-discs_dlabel.nii.gz} | 0 ...rdiff02_T2star_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...ff02_T2star_label-discs_desc-warp_dlabel.nii.gz} | 0 ...on => sub-cardiff02_T2w_label-discs_dlabel.json} | 0 ... => sub-cardiff02_T2w_label-discs_dlabel.nii.gz} | 0 ...ip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...p-2_mt-off_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ..._mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...cardiff02_space-other_T2star_label-SC_seg.nii.gz | 2 +- ...e-other_T2star_label-discs_desc-warp_dlabel.json | 12 ------------ ...on => sub-cardiff03_T1w_label-discs_dlabel.json} | 0 ... => sub-cardiff03_T1w_label-discs_dlabel.nii.gz} | 0 ...rdiff03_T2star_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...ff03_T2star_label-discs_desc-warp_dlabel.nii.gz} | 0 ...on => sub-cardiff03_T2w_label-discs_dlabel.json} | 0 ... => sub-cardiff03_T2w_label-discs_dlabel.nii.gz} | 0 ...ip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...p-2_mt-off_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ..._mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...cardiff03_space-other_T2star_label-SC_seg.nii.gz | 2 +- ...e-other_T2star_label-discs_desc-warp_dlabel.json | 12 ------------ ...on => sub-cardiff04_T1w_label-discs_dlabel.json} | 0 ... => sub-cardiff04_T1w_label-discs_dlabel.nii.gz} | 0 ...rdiff04_T2star_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...ff04_T2star_label-discs_desc-warp_dlabel.nii.gz} | 0 ...on => sub-cardiff04_T2w_label-discs_dlabel.json} | 0 ... => sub-cardiff04_T2w_label-discs_dlabel.nii.gz} | 0 ...ip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...p-2_mt-off_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ..._mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...cardiff04_space-other_T2star_label-SC_seg.nii.gz | 2 +- ...e-other_T2star_label-discs_desc-warp_dlabel.json | 12 ------------ ...on => sub-cardiff05_T1w_label-discs_dlabel.json} | 0 ... => sub-cardiff05_T1w_label-discs_dlabel.nii.gz} | 0 ...rdiff05_T2star_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...ff05_T2star_label-discs_desc-warp_dlabel.nii.gz} | 0 ...on => sub-cardiff05_T2w_label-discs_dlabel.json} | 0 ... => sub-cardiff05_T2w_label-discs_dlabel.nii.gz} | 0 ...ip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...p-2_mt-off_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ..._mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...-other_T1w_label-vertebrae_desc-C2C5_dlabel.json | 11 +++++++++++ ...her_T1w_label-vertebrae_desc-C2C5_dlabel.nii.gz} | 0 ...cardiff05_space-other_T2star_label-SC_seg.nii.gz | 2 +- ...e-other_T2star_label-discs_desc-warp_dlabel.json | 12 ------------ ...on => sub-cardiff06_T1w_label-discs_dlabel.json} | 0 ... => sub-cardiff06_T1w_label-discs_dlabel.nii.gz} | 0 ...rdiff06_T2star_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...ff06_T2star_label-discs_desc-warp_dlabel.nii.gz} | 0 ...on => sub-cardiff06_T2w_label-discs_dlabel.json} | 0 ... => sub-cardiff06_T2w_label-discs_dlabel.nii.gz} | 0 ...ip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...p-2_mt-off_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ..._mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...cardiff06_space-other_T2star_label-SC_seg.nii.gz | 2 +- ...e-other_T2star_label-discs_desc-warp_dlabel.json | 12 ------------ ...json => sub-cmrra01_T1w_label-discs_dlabel.json} | 0 ...gz => sub-cmrra01_T1w_label-discs_dlabel.nii.gz} | 0 ...cmrra01_T2star_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...ra01_T2star_label-discs_desc-warp_dlabel.nii.gz} | 0 ...json => sub-cmrra01_T2w_label-discs_dlabel.json} | 0 ...gz => sub-cmrra01_T2w_label-discs_dlabel.nii.gz} | 0 ...ip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...p-2_mt-off_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ..._mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...b-cmrra01_space-other_T2star_label-SC_seg.nii.gz | 2 +- ...e-other_T2star_label-discs_desc-warp_dlabel.json | 12 ------------ ...json => sub-cmrra02_T1w_label-discs_dlabel.json} | 0 ...gz => sub-cmrra02_T1w_label-discs_dlabel.nii.gz} | 0 ...cmrra02_T2star_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...ra02_T2star_label-discs_desc-warp_dlabel.nii.gz} | 0 ...json => sub-cmrra02_T2w_label-discs_dlabel.json} | 0 ...gz => sub-cmrra02_T2w_label-discs_dlabel.nii.gz} | 0 ...ip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...p-2_mt-off_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ..._mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...b-cmrra02_space-other_T2star_label-SC_seg.nii.gz | 2 +- ...e-other_T2star_label-discs_desc-warp_dlabel.json | 12 ------------ ...json => sub-cmrra03_T1w_label-discs_dlabel.json} | 0 ...gz => sub-cmrra03_T1w_label-discs_dlabel.nii.gz} | 0 ...cmrra03_T2star_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...ra03_T2star_label-discs_desc-warp_dlabel.nii.gz} | 0 ...json => sub-cmrra03_T2w_label-discs_dlabel.json} | 0 ...gz => sub-cmrra03_T2w_label-discs_dlabel.nii.gz} | 0 ...ip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...p-2_mt-off_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ..._mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...b-cmrra03_space-other_T2star_label-SC_seg.nii.gz | 2 +- ...e-other_T2star_label-discs_desc-warp_dlabel.json | 12 ------------ ...json => sub-cmrra04_T1w_label-discs_dlabel.json} | 0 ...gz => sub-cmrra04_T1w_label-discs_dlabel.nii.gz} | 0 ...cmrra04_T2star_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...ra04_T2star_label-discs_desc-warp_dlabel.nii.gz} | 0 ...json => sub-cmrra04_T2w_label-discs_dlabel.json} | 0 ...gz => sub-cmrra04_T2w_label-discs_dlabel.nii.gz} | 0 ...ip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...p-2_mt-off_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ..._mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...b-cmrra04_space-other_T2star_label-SC_seg.nii.gz | 2 +- ...e-other_T2star_label-discs_desc-warp_dlabel.json | 12 ------------ ...json => sub-cmrra05_T1w_label-discs_dlabel.json} | 0 ...gz => sub-cmrra05_T1w_label-discs_dlabel.nii.gz} | 0 ...cmrra05_T2star_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...ra05_T2star_label-discs_desc-warp_dlabel.nii.gz} | 0 ...json => sub-cmrra05_T2w_label-discs_dlabel.json} | 0 ...gz => sub-cmrra05_T2w_label-discs_dlabel.nii.gz} | 0 ...ip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...p-2_mt-off_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ..._mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...-other_T1w_label-vertebrae_desc-C2C5_dlabel.json | 11 +++++++++++ ...her_T1w_label-vertebrae_desc-C2C5_dlabel.nii.gz} | 0 ...b-cmrra05_space-other_T2star_label-SC_seg.nii.gz | 2 +- ...e-other_T2star_label-discs_desc-warp_dlabel.json | 12 ------------ ...json => sub-cmrra06_T1w_label-discs_dlabel.json} | 0 ...gz => sub-cmrra06_T1w_label-discs_dlabel.nii.gz} | 0 ...cmrra06_T2star_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...ra06_T2star_label-discs_desc-warp_dlabel.nii.gz} | 0 ...json => sub-cmrra06_T2w_label-discs_dlabel.json} | 0 ...gz => sub-cmrra06_T2w_label-discs_dlabel.nii.gz} | 0 ...ip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...p-2_mt-off_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ..._mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...b-cmrra06_space-other_T2star_label-SC_seg.nii.gz | 2 +- ...e-other_T2star_label-discs_desc-warp_dlabel.json | 12 ------------ ...json => sub-cmrrb01_T1w_label-discs_dlabel.json} | 0 ...gz => sub-cmrrb01_T1w_label-discs_dlabel.nii.gz} | 0 ...cmrrb01_T2star_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...rb01_T2star_label-discs_desc-warp_dlabel.nii.gz} | 0 ...json => sub-cmrrb01_T2w_label-discs_dlabel.json} | 0 ...gz => sub-cmrrb01_T2w_label-discs_dlabel.nii.gz} | 0 ...ip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...p-2_mt-off_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ..._mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...b-cmrrb01_space-other_T2star_label-SC_seg.nii.gz | 2 +- ...e-other_T2star_label-discs_desc-warp_dlabel.json | 12 ------------ ...json => sub-cmrrb02_T1w_label-discs_dlabel.json} | 0 ...gz => sub-cmrrb02_T1w_label-discs_dlabel.nii.gz} | 0 ...cmrrb02_T2star_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...rb02_T2star_label-discs_desc-warp_dlabel.nii.gz} | 0 ...json => sub-cmrrb02_T2w_label-discs_dlabel.json} | 0 ...gz => sub-cmrrb02_T2w_label-discs_dlabel.nii.gz} | 0 ...ip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...p-2_mt-off_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ..._mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...b-cmrrb02_space-other_T2star_label-SC_seg.nii.gz | 2 +- ...e-other_T2star_label-discs_desc-warp_dlabel.json | 12 ------------ ...json => sub-cmrrb03_T1w_label-discs_dlabel.json} | 0 ...gz => sub-cmrrb03_T1w_label-discs_dlabel.nii.gz} | 0 ...cmrrb03_T2star_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...rb03_T2star_label-discs_desc-warp_dlabel.nii.gz} | 0 ...json => sub-cmrrb03_T2w_label-discs_dlabel.json} | 0 ...gz => sub-cmrrb03_T2w_label-discs_dlabel.nii.gz} | 0 ...ip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...p-2_mt-off_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ..._mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...b-cmrrb03_space-other_T2star_label-SC_seg.nii.gz | 2 +- ...e-other_T2star_label-discs_desc-warp_dlabel.json | 12 ------------ ... sub-cmrrb03_space-other_T2w_label-CSF_seg.json} | 0 ...ub-cmrrb03_space-other_T2w_label-CSF_seg.nii.gz} | 0 ...sub-cmrrb03_space-other_T2w_label-canal_seg.json | 11 +++++++++++ ...b-cmrrb03_space-other_T2w_label-canal_seg.nii.gz | 1 + ...json => sub-cmrrb04_T1w_label-discs_dlabel.json} | 0 ...gz => sub-cmrrb04_T1w_label-discs_dlabel.nii.gz} | 0 ...cmrrb04_T2star_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...rb04_T2star_label-discs_desc-warp_dlabel.nii.gz} | 0 ...json => sub-cmrrb04_T2w_label-discs_dlabel.json} | 0 ...gz => sub-cmrrb04_T2w_label-discs_dlabel.nii.gz} | 0 ...ip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...p-2_mt-off_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ..._mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...b-cmrrb04_space-other_T2star_label-SC_seg.nii.gz | 2 +- ...e-other_T2star_label-discs_desc-warp_dlabel.json | 12 ------------ ...json => sub-cmrrb05_T1w_label-discs_dlabel.json} | 0 ...gz => sub-cmrrb05_T1w_label-discs_dlabel.nii.gz} | 0 ...cmrrb05_T2star_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...rb05_T2star_label-discs_desc-warp_dlabel.nii.gz} | 0 ...json => sub-cmrrb05_T2w_label-discs_dlabel.json} | 0 ...gz => sub-cmrrb05_T2w_label-discs_dlabel.nii.gz} | 0 ...ip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...p-2_mt-off_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ..._mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...b-cmrrb05_space-other_T2star_label-SC_seg.nii.gz | 2 +- ...e-other_T2star_label-discs_desc-warp_dlabel.json | 12 ------------ ...json => sub-cmrrb06_T1w_label-discs_dlabel.json} | 0 ...gz => sub-cmrrb06_T1w_label-discs_dlabel.nii.gz} | 0 ...cmrrb06_T2star_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...rb06_T2star_label-discs_desc-warp_dlabel.nii.gz} | 0 ...json => sub-cmrrb06_T2w_label-discs_dlabel.json} | 0 ...gz => sub-cmrrb06_T2w_label-discs_dlabel.nii.gz} | 0 ...ip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...p-2_mt-off_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ..._mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...b-cmrrb06_space-other_T2star_label-SC_seg.nii.gz | 2 +- ...e-other_T2star_label-discs_desc-warp_dlabel.json | 12 ------------ ...json => sub-cmrrb07_T1w_label-discs_dlabel.json} | 0 ...gz => sub-cmrrb07_T1w_label-discs_dlabel.nii.gz} | 0 ...cmrrb07_T2star_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...rb07_T2star_label-discs_desc-warp_dlabel.nii.gz} | 0 ...json => sub-cmrrb07_T2w_label-discs_dlabel.json} | 0 ...gz => sub-cmrrb07_T2w_label-discs_dlabel.nii.gz} | 0 ...ip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...p-2_mt-off_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ..._mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...b-cmrrb07_space-other_T2star_label-SC_seg.nii.gz | 2 +- ...e-other_T2star_label-discs_desc-warp_dlabel.json | 12 ------------ ...on => sub-dresden01_T1w_label-discs_dlabel.json} | 0 ... => sub-dresden01_T1w_label-discs_dlabel.nii.gz} | 0 ...esden01_T2star_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...en01_T2star_label-discs_desc-warp_dlabel.nii.gz} | 0 ...on => sub-dresden01_T2w_label-discs_dlabel.json} | 0 ... => sub-dresden01_T2w_label-discs_dlabel.nii.gz} | 0 ...ip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...p-2_mt-off_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ..._mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...dresden01_space-other_T2star_label-SC_seg.nii.gz | 2 +- ...e-other_T2star_label-discs_desc-warp_dlabel.json | 12 ------------ ...on => sub-dresden02_T1w_label-discs_dlabel.json} | 0 ... => sub-dresden02_T1w_label-discs_dlabel.nii.gz} | 0 ...esden02_T2star_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...en02_T2star_label-discs_desc-warp_dlabel.nii.gz} | 0 ...on => sub-dresden02_T2w_label-discs_dlabel.json} | 0 ... => sub-dresden02_T2w_label-discs_dlabel.nii.gz} | 0 ...ip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...p-2_mt-off_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ..._mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...dresden02_space-other_T2star_label-SC_seg.nii.gz | 2 +- ...e-other_T2star_label-discs_desc-warp_dlabel.json | 12 ------------ ...=> sub-fslAchieva01_T1w_label-discs_dlabel.json} | 0 ... sub-fslAchieva01_T1w_label-discs_dlabel.nii.gz} | 0 ...hieva01_T2star_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...va01_T2star_label-discs_desc-warp_dlabel.nii.gz} | 0 ...=> sub-fslAchieva01_T2w_label-discs_dlabel.json} | 0 ... sub-fslAchieva01_T2w_label-discs_dlabel.nii.gz} | 0 ...ip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...p-2_mt-off_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ..._mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...-other_T1w_label-vertebrae_desc-C2C5_dlabel.json | 11 +++++++++++ ...her_T1w_label-vertebrae_desc-C2C5_dlabel.nii.gz} | 0 ...hieva01_space-other_T2star_gmlabel-SC_seg.nii.gz | 2 +- ...Achieva01_space-other_T2star_label-SC_seg.nii.gz | 2 +- ...e-other_T2star_label-discs_desc-warp_dlabel.json | 12 ------------ ...=> sub-fslAchieva02_T1w_label-discs_dlabel.json} | 0 ... sub-fslAchieva02_T1w_label-discs_dlabel.nii.gz} | 0 ...hieva02_T2star_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...va02_T2star_label-discs_desc-warp_dlabel.nii.gz} | 0 ...=> sub-fslAchieva02_T2w_label-discs_dlabel.json} | 0 ... sub-fslAchieva02_T2w_label-discs_dlabel.nii.gz} | 0 ...ip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...p-2_mt-off_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ..._mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...Achieva02_space-other_T2star_label-SC_seg.nii.gz | 2 +- ...e-other_T2star_label-discs_desc-warp_dlabel.json | 12 ------------ ...=> sub-fslAchieva03_T1w_label-discs_dlabel.json} | 0 ... sub-fslAchieva03_T1w_label-discs_dlabel.nii.gz} | 0 ...hieva03_T2star_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...va03_T2star_label-discs_desc-warp_dlabel.nii.gz} | 0 ...=> sub-fslAchieva03_T2w_label-discs_dlabel.json} | 0 ... sub-fslAchieva03_T2w_label-discs_dlabel.nii.gz} | 0 ...ip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...p-2_mt-off_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ..._mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...Achieva03_space-other_T2star_label-SC_seg.nii.gz | 2 +- ...e-other_T2star_label-discs_desc-warp_dlabel.json | 12 ------------ ...=> sub-fslAchieva04_T1w_label-discs_dlabel.json} | 0 ... sub-fslAchieva04_T1w_label-discs_dlabel.nii.gz} | 0 ...hieva04_T2star_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...va04_T2star_label-discs_desc-warp_dlabel.nii.gz} | 0 ...=> sub-fslAchieva04_T2w_label-discs_dlabel.json} | 0 ... sub-fslAchieva04_T2w_label-discs_dlabel.nii.gz} | 0 ...ip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...p-2_mt-off_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ..._mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...hieva04_space-other_T2star_gmlabel-SC_seg.nii.gz | 2 +- ...Achieva04_space-other_T2star_label-SC_seg.nii.gz | 2 +- ...e-other_T2star_label-discs_desc-warp_dlabel.json | 12 ------------ ...=> sub-fslAchieva05_T1w_label-discs_dlabel.json} | 0 ... sub-fslAchieva05_T1w_label-discs_dlabel.nii.gz} | 0 ...hieva05_T2star_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...va05_T2star_label-discs_desc-warp_dlabel.nii.gz} | 0 ...=> sub-fslAchieva05_T2w_label-discs_dlabel.json} | 0 ... sub-fslAchieva05_T2w_label-discs_dlabel.nii.gz} | 0 ...ip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...p-2_mt-off_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ..._mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...Achieva05_space-other_T2star_label-SC_seg.nii.gz | 2 +- ...e-other_T2star_label-discs_desc-warp_dlabel.json | 12 ------------ ...=> sub-fslAchieva06_T1w_label-discs_dlabel.json} | 0 ... sub-fslAchieva06_T1w_label-discs_dlabel.nii.gz} | 0 ...hieva06_T2star_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...va06_T2star_label-discs_desc-warp_dlabel.nii.gz} | 0 ...=> sub-fslAchieva06_T2w_label-discs_dlabel.json} | 0 ... sub-fslAchieva06_T2w_label-discs_dlabel.nii.gz} | 0 ...ip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...p-2_mt-off_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ..._mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...Achieva06_space-other_T2star_label-SC_seg.nii.gz | 2 +- ...e-other_T2star_label-discs_desc-warp_dlabel.json | 12 ------------ ... => sub-fslPrisma01_T1w_label-discs_dlabel.json} | 0 ...> sub-fslPrisma01_T1w_label-discs_dlabel.nii.gz} | 0 ...risma01_T2star_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...ma01_T2star_label-discs_desc-warp_dlabel.nii.gz} | 0 ... => sub-fslPrisma01_T2w_label-discs_dlabel.json} | 0 ...> sub-fslPrisma01_T2w_label-discs_dlabel.nii.gz} | 0 ...ip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...p-2_mt-off_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ..._mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...lPrisma01_space-other_T2star_label-SC_seg.nii.gz | 2 +- ...e-other_T2star_label-discs_desc-warp_dlabel.json | 12 ------------ ... => sub-fslPrisma02_T1w_label-discs_dlabel.json} | 0 ...> sub-fslPrisma02_T1w_label-discs_dlabel.nii.gz} | 0 ...risma02_T2star_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...ma02_T2star_label-discs_desc-warp_dlabel.nii.gz} | 0 ... => sub-fslPrisma02_T2w_label-discs_dlabel.json} | 0 ...> sub-fslPrisma02_T2w_label-discs_dlabel.nii.gz} | 0 ...ip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...p-2_mt-off_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ..._mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...lPrisma02_space-other_T2star_label-SC_seg.nii.gz | 2 +- ...e-other_T2star_label-discs_desc-warp_dlabel.json | 12 ------------ ... => sub-fslPrisma03_T1w_label-discs_dlabel.json} | 0 ...> sub-fslPrisma03_T1w_label-discs_dlabel.nii.gz} | 0 ...risma03_T2star_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...ma03_T2star_label-discs_desc-warp_dlabel.nii.gz} | 0 ... => sub-fslPrisma03_T2w_label-discs_dlabel.json} | 0 ...> sub-fslPrisma03_T2w_label-discs_dlabel.nii.gz} | 0 ...ip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...p-2_mt-off_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ..._mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...lPrisma03_space-other_T2star_label-SC_seg.nii.gz | 2 +- ...e-other_T2star_label-discs_desc-warp_dlabel.json | 12 ------------ ... => sub-fslPrisma04_T1w_label-discs_dlabel.json} | 0 ...> sub-fslPrisma04_T1w_label-discs_dlabel.nii.gz} | 0 ...risma04_T2star_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...ma04_T2star_label-discs_desc-warp_dlabel.nii.gz} | 0 ... => sub-fslPrisma04_T2w_label-discs_dlabel.json} | 0 ...> sub-fslPrisma04_T2w_label-discs_dlabel.nii.gz} | 0 ...ip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...p-2_mt-off_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ..._mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...lPrisma04_space-other_T2star_label-SC_seg.nii.gz | 2 +- ...e-other_T2star_label-discs_desc-warp_dlabel.json | 12 ------------ ... => sub-fslPrisma05_T1w_label-discs_dlabel.json} | 0 ...> sub-fslPrisma05_T1w_label-discs_dlabel.nii.gz} | 0 ...risma05_T2star_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...ma05_T2star_label-discs_desc-warp_dlabel.nii.gz} | 0 ... => sub-fslPrisma05_T2w_label-discs_dlabel.json} | 0 ...> sub-fslPrisma05_T2w_label-discs_dlabel.nii.gz} | 0 ...ip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...p-2_mt-off_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ..._mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...lPrisma05_space-other_T2star_label-SC_seg.nii.gz | 2 +- ...e-other_T2star_label-discs_desc-warp_dlabel.json | 12 ------------ ... => sub-fslPrisma06_T1w_label-discs_dlabel.json} | 0 ...> sub-fslPrisma06_T1w_label-discs_dlabel.nii.gz} | 0 ...risma06_T2star_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...ma06_T2star_label-discs_desc-warp_dlabel.nii.gz} | 0 ... => sub-fslPrisma06_T2w_label-discs_dlabel.json} | 0 ...> sub-fslPrisma06_T2w_label-discs_dlabel.nii.gz} | 0 ...ip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...p-2_mt-off_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ..._mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...lPrisma06_space-other_T2star_label-SC_seg.nii.gz | 2 +- ...e-other_T2star_label-discs_desc-warp_dlabel.json | 12 ------------ ...son => sub-geneva01_T1w_label-discs_dlabel.json} | 0 ...z => sub-geneva01_T1w_label-discs_dlabel.nii.gz} | 0 ...eneva01_T2star_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...va01_T2star_label-discs_desc-warp_dlabel.nii.gz} | 0 ...son => sub-geneva01_T2w_label-discs_dlabel.json} | 0 ...z => sub-geneva01_T2w_label-discs_dlabel.nii.gz} | 0 ...ip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...p-2_mt-off_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ..._mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...-geneva01_space-other_T2star_label-SC_seg.nii.gz | 2 +- ...e-other_T2star_label-discs_desc-warp_dlabel.json | 12 ------------ ...son => sub-geneva02_T1w_label-discs_dlabel.json} | 0 ...z => sub-geneva02_T1w_label-discs_dlabel.nii.gz} | 0 ...eneva02_T2star_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...va02_T2star_label-discs_desc-warp_dlabel.nii.gz} | 0 ...son => sub-geneva02_T2w_label-discs_dlabel.json} | 0 ...z => sub-geneva02_T2w_label-discs_dlabel.nii.gz} | 0 ...ip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...p-2_mt-off_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ..._mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...-geneva02_space-other_T2star_label-SC_seg.nii.gz | 2 +- ...e-other_T2star_label-discs_desc-warp_dlabel.json | 12 ------------ ...son => sub-geneva03_T1w_label-discs_dlabel.json} | 0 ...z => sub-geneva03_T1w_label-discs_dlabel.nii.gz} | 0 ...eneva03_T2star_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...va03_T2star_label-discs_desc-warp_dlabel.nii.gz} | 0 ...son => sub-geneva03_T2w_label-discs_dlabel.json} | 0 ...z => sub-geneva03_T2w_label-discs_dlabel.nii.gz} | 0 ...ip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...p-2_mt-off_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ..._mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...-geneva03_space-other_T2star_label-SC_seg.nii.gz | 2 +- ...e-other_T2star_label-discs_desc-warp_dlabel.json | 12 ------------ ...son => sub-geneva04_T1w_label-discs_dlabel.json} | 0 ...z => sub-geneva04_T1w_label-discs_dlabel.nii.gz} | 0 ...eneva04_T2star_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...va04_T2star_label-discs_desc-warp_dlabel.nii.gz} | 0 ...son => sub-geneva04_T2w_label-discs_dlabel.json} | 0 ...z => sub-geneva04_T2w_label-discs_dlabel.nii.gz} | 0 ...ip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...p-2_mt-off_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ..._mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...-geneva04_space-other_T2star_label-SC_seg.nii.gz | 2 +- ...e-other_T2star_label-discs_desc-warp_dlabel.json | 12 ------------ ...sub-geneva04_space-other_T2w_label-CSF_seg.json} | 0 ...b-geneva04_space-other_T2w_label-CSF_seg.nii.gz} | 0 ...ub-geneva04_space-other_T2w_label-canal_seg.json | 11 +++++++++++ ...-geneva04_space-other_T2w_label-canal_seg.nii.gz | 1 + ...son => sub-geneva05_T1w_label-discs_dlabel.json} | 0 ...z => sub-geneva05_T1w_label-discs_dlabel.nii.gz} | 0 ...eneva05_T2star_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...va05_T2star_label-discs_desc-warp_dlabel.nii.gz} | 0 ...son => sub-geneva05_T2w_label-discs_dlabel.json} | 0 ...z => sub-geneva05_T2w_label-discs_dlabel.nii.gz} | 0 ...ip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...p-2_mt-off_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ..._mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...-geneva05_space-other_T2star_label-SC_seg.nii.gz | 2 +- ...e-other_T2star_label-discs_desc-warp_dlabel.json | 12 ------------ ...son => sub-geneva06_T1w_label-discs_dlabel.json} | 0 ...z => sub-geneva06_T1w_label-discs_dlabel.nii.gz} | 0 ...eneva06_T2star_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...va06_T2star_label-discs_desc-warp_dlabel.nii.gz} | 0 ...son => sub-geneva06_T2w_label-discs_dlabel.json} | 0 ...z => sub-geneva06_T2w_label-discs_dlabel.nii.gz} | 0 ...ip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...p-2_mt-off_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ..._mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...-geneva06_space-other_T2star_label-SC_seg.nii.gz | 2 +- ...e-other_T2star_label-discs_desc-warp_dlabel.json | 12 ------------ ...on => sub-hamburg01_T1w_label-discs_dlabel.json} | 0 ... => sub-hamburg01_T1w_label-discs_dlabel.nii.gz} | 0 ...mburg01_T2star_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...rg01_T2star_label-discs_desc-warp_dlabel.nii.gz} | 0 ...on => sub-hamburg01_T2w_label-discs_dlabel.json} | 0 ... => sub-hamburg01_T2w_label-discs_dlabel.nii.gz} | 0 ...ip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...p-2_mt-off_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ..._mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...hamburg01_space-other_T2star_label-SC_seg.nii.gz | 2 +- ...e-other_T2star_label-discs_desc-warp_dlabel.json | 12 ------------ ...on => sub-hamburg02_T1w_label-discs_dlabel.json} | 0 ... => sub-hamburg02_T1w_label-discs_dlabel.nii.gz} | 0 ...mburg02_T2star_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...rg02_T2star_label-discs_desc-warp_dlabel.nii.gz} | 0 ...on => sub-hamburg02_T2w_label-discs_dlabel.json} | 0 ... => sub-hamburg02_T2w_label-discs_dlabel.nii.gz} | 0 ...ip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...p-2_mt-off_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ..._mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...hamburg02_space-other_T2star_label-SC_seg.nii.gz | 2 +- ...e-other_T2star_label-discs_desc-warp_dlabel.json | 12 ------------ ...on => sub-hamburg03_T1w_label-discs_dlabel.json} | 0 ... => sub-hamburg03_T1w_label-discs_dlabel.nii.gz} | 0 ...mburg03_T2star_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...rg03_T2star_label-discs_desc-warp_dlabel.nii.gz} | 0 ...on => sub-hamburg03_T2w_label-discs_dlabel.json} | 0 ... => sub-hamburg03_T2w_label-discs_dlabel.nii.gz} | 0 ...ip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...p-2_mt-off_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ..._mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...hamburg03_space-other_T2star_label-SC_seg.nii.gz | 2 +- ...e-other_T2star_label-discs_desc-warp_dlabel.json | 12 ------------ ...on => sub-hamburg04_T1w_label-discs_dlabel.json} | 0 ... => sub-hamburg04_T1w_label-discs_dlabel.nii.gz} | 0 ...mburg04_T2star_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...rg04_T2star_label-discs_desc-warp_dlabel.nii.gz} | 0 ...on => sub-hamburg04_T2w_label-discs_dlabel.json} | 0 ... => sub-hamburg04_T2w_label-discs_dlabel.nii.gz} | 0 ...ip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...p-2_mt-off_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ..._mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...hamburg04_space-other_T2star_label-SC_seg.nii.gz | 2 +- ...e-other_T2star_label-discs_desc-warp_dlabel.json | 12 ------------ ...on => sub-hamburg05_T1w_label-discs_dlabel.json} | 0 ... => sub-hamburg05_T1w_label-discs_dlabel.nii.gz} | 0 ...mburg05_T2star_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...rg05_T2star_label-discs_desc-warp_dlabel.nii.gz} | 0 ...on => sub-hamburg05_T2w_label-discs_dlabel.json} | 0 ... => sub-hamburg05_T2w_label-discs_dlabel.nii.gz} | 0 ...ip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...p-2_mt-off_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ..._mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...hamburg05_space-other_T2star_label-SC_seg.nii.gz | 2 +- ...e-other_T2star_label-discs_desc-warp_dlabel.json | 12 ------------ ...on => sub-hamburg06_T1w_label-discs_dlabel.json} | 0 ... => sub-hamburg06_T1w_label-discs_dlabel.nii.gz} | 0 ...mburg06_T2star_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...rg06_T2star_label-discs_desc-warp_dlabel.nii.gz} | 0 ...on => sub-hamburg06_T2w_label-discs_dlabel.json} | 0 ... => sub-hamburg06_T2w_label-discs_dlabel.nii.gz} | 0 ...ip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...p-2_mt-off_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ..._mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...hamburg06_space-other_T2star_label-SC_seg.nii.gz | 2 +- ...e-other_T2star_label-discs_desc-warp_dlabel.json | 12 ------------ ... sub-juntendo750w01_T1w_label-discs_dlabel.json} | 0 ...ub-juntendo750w01_T1w_label-discs_dlabel.nii.gz} | 0 ...o750w01_T2star_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...0w01_T2star_label-discs_desc-warp_dlabel.nii.gz} | 0 ... sub-juntendo750w01_T2w_label-discs_dlabel.json} | 0 ...ub-juntendo750w01_T2w_label-discs_dlabel.nii.gz} | 0 ...ip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...p-2_mt-off_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ..._mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...ndo750w01_space-other_T2star_label-SC_seg.nii.gz | 2 +- ...e-other_T2star_label-discs_desc-warp_dlabel.json | 12 ------------ ... sub-juntendo750w02_T1w_label-discs_dlabel.json} | 0 ...ub-juntendo750w02_T1w_label-discs_dlabel.nii.gz} | 0 ...o750w02_T2star_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...0w02_T2star_label-discs_desc-warp_dlabel.nii.gz} | 0 ... sub-juntendo750w02_T2w_label-discs_dlabel.json} | 0 ...ub-juntendo750w02_T2w_label-discs_dlabel.nii.gz} | 0 ...ip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...p-2_mt-off_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ..._mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...ndo750w02_space-other_T2star_label-SC_seg.nii.gz | 2 +- ...e-other_T2star_label-discs_desc-warp_dlabel.json | 12 ------------ ... sub-juntendo750w03_T1w_label-discs_dlabel.json} | 0 ...ub-juntendo750w03_T1w_label-discs_dlabel.nii.gz} | 0 ...o750w03_T2star_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...0w03_T2star_label-discs_desc-warp_dlabel.nii.gz} | 0 ... sub-juntendo750w03_T2w_label-discs_dlabel.json} | 0 ...ub-juntendo750w03_T2w_label-discs_dlabel.nii.gz} | 0 ...ip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...p-2_mt-off_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ..._mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...ndo750w03_space-other_T2star_label-SC_seg.nii.gz | 2 +- ...e-other_T2star_label-discs_desc-warp_dlabel.json | 12 ------------ ... sub-juntendo750w04_T1w_label-discs_dlabel.json} | 0 ...ub-juntendo750w04_T1w_label-discs_dlabel.nii.gz} | 0 ...o750w04_T2star_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...0w04_T2star_label-discs_desc-warp_dlabel.nii.gz} | 0 ... sub-juntendo750w04_T2w_label-discs_dlabel.json} | 0 ...ub-juntendo750w04_T2w_label-discs_dlabel.nii.gz} | 0 ...ip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...p-2_mt-off_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ..._mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...ndo750w04_space-other_T2star_label-SC_seg.nii.gz | 2 +- ...e-other_T2star_label-discs_desc-warp_dlabel.json | 12 ------------ ... sub-juntendo750w05_T1w_label-discs_dlabel.json} | 0 ...ub-juntendo750w05_T1w_label-discs_dlabel.nii.gz} | 0 ...o750w05_T2star_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...0w05_T2star_label-discs_desc-warp_dlabel.nii.gz} | 0 ... sub-juntendo750w05_T2w_label-discs_dlabel.json} | 0 ...ub-juntendo750w05_T2w_label-discs_dlabel.nii.gz} | 0 ...ip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...p-2_mt-off_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ..._mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...ndo750w05_space-other_T2star_label-SC_seg.nii.gz | 2 +- ...e-other_T2star_label-discs_desc-warp_dlabel.json | 12 ------------ ... sub-juntendo750w06_T1w_label-discs_dlabel.json} | 0 ...ub-juntendo750w06_T1w_label-discs_dlabel.nii.gz} | 0 ...o750w06_T2star_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...0w06_T2star_label-discs_desc-warp_dlabel.nii.gz} | 0 ... sub-juntendo750w06_T2w_label-discs_dlabel.json} | 0 ...ub-juntendo750w06_T2w_label-discs_dlabel.nii.gz} | 0 ...ip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...p-2_mt-off_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ..._mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...ndo750w06_space-other_T2star_label-SC_seg.nii.gz | 2 +- ...e-other_T2star_label-discs_desc-warp_dlabel.json | 12 ------------ ...l.json => sub-mgh01_T1w_label-discs_dlabel.json} | 0 ...i.gz => sub-mgh01_T1w_label-discs_dlabel.nii.gz} | 0 ...b-mgh01_T2star_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...gh01_T2star_label-discs_desc-warp_dlabel.nii.gz} | 0 ...l.json => sub-mgh01_T2w_label-discs_dlabel.json} | 0 ...i.gz => sub-mgh01_T2w_label-discs_dlabel.nii.gz} | 0 ...ip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...p-2_mt-off_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ..._mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...-other_T1w_label-vertebrae_desc-C2C5_dlabel.json | 11 +++++++++++ ...her_T1w_label-vertebrae_desc-C2C5_dlabel.nii.gz} | 0 ...sub-mgh01_space-other_T2star_label-SC_seg.nii.gz | 2 +- ...e-other_T2star_label-discs_desc-warp_dlabel.json | 12 ------------ ...l.json => sub-mgh02_T1w_label-discs_dlabel.json} | 0 ...i.gz => sub-mgh02_T1w_label-discs_dlabel.nii.gz} | 0 ...b-mgh02_T2star_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...gh02_T2star_label-discs_desc-warp_dlabel.nii.gz} | 0 ...l.json => sub-mgh02_T2w_label-discs_dlabel.json} | 0 ...i.gz => sub-mgh02_T2w_label-discs_dlabel.nii.gz} | 0 ...ip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...p-2_mt-off_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ..._mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...-other_T1w_label-vertebrae_desc-C2C5_dlabel.json | 11 +++++++++++ ...her_T1w_label-vertebrae_desc-C2C5_dlabel.nii.gz} | 0 ...sub-mgh02_space-other_T2star_label-SC_seg.nii.gz | 2 +- ...e-other_T2star_label-discs_desc-warp_dlabel.json | 12 ------------ ...l.json => sub-mgh03_T1w_label-discs_dlabel.json} | 0 ...i.gz => sub-mgh03_T1w_label-discs_dlabel.nii.gz} | 0 ...b-mgh03_T2star_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...gh03_T2star_label-discs_desc-warp_dlabel.nii.gz} | 0 ...l.json => sub-mgh03_T2w_label-discs_dlabel.json} | 0 ...i.gz => sub-mgh03_T2w_label-discs_dlabel.nii.gz} | 0 ...ip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...p-2_mt-off_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ..._mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...sub-mgh03_space-other_T2star_label-SC_seg.nii.gz | 2 +- ...e-other_T2star_label-discs_desc-warp_dlabel.json | 12 ------------ ...l.json => sub-mgh04_T1w_label-discs_dlabel.json} | 0 ...i.gz => sub-mgh04_T1w_label-discs_dlabel.nii.gz} | 0 ...b-mgh04_T2star_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...gh04_T2star_label-discs_desc-warp_dlabel.nii.gz} | 0 ...l.json => sub-mgh04_T2w_label-discs_dlabel.json} | 0 ...i.gz => sub-mgh04_T2w_label-discs_dlabel.nii.gz} | 0 ...ip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...p-2_mt-off_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ..._mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...sub-mgh04_space-other_T2star_label-SC_seg.nii.gz | 2 +- ...e-other_T2star_label-discs_desc-warp_dlabel.json | 12 ------------ ...l.json => sub-mgh05_T1w_label-discs_dlabel.json} | 0 ...i.gz => sub-mgh05_T1w_label-discs_dlabel.nii.gz} | 0 ...b-mgh05_T2star_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...gh05_T2star_label-discs_desc-warp_dlabel.nii.gz} | 0 ...l.json => sub-mgh05_T2w_label-discs_dlabel.json} | 0 ...i.gz => sub-mgh05_T2w_label-discs_dlabel.nii.gz} | 0 ...ip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...p-2_mt-off_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ..._mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...-other_T1w_label-vertebrae_desc-C2C5_dlabel.json | 11 +++++++++++ ...her_T1w_label-vertebrae_desc-C2C5_dlabel.nii.gz} | 0 ...sub-mgh05_space-other_T2star_label-SC_seg.nii.gz | 2 +- ...e-other_T2star_label-discs_desc-warp_dlabel.json | 12 ------------ ...l.json => sub-mgh06_T1w_label-discs_dlabel.json} | 0 ...i.gz => sub-mgh06_T1w_label-discs_dlabel.nii.gz} | 0 ...b-mgh06_T2star_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...gh06_T2star_label-discs_desc-warp_dlabel.nii.gz} | 0 ...l.json => sub-mgh06_T2w_label-discs_dlabel.json} | 0 ...i.gz => sub-mgh06_T2w_label-discs_dlabel.nii.gz} | 0 ...ip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...p-2_mt-off_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ..._mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...sub-mgh06_space-other_T2star_label-SC_seg.nii.gz | 2 +- ...e-other_T2star_label-discs_desc-warp_dlabel.json | 12 ------------ ...json => sub-milan01_T1w_label-discs_dlabel.json} | 0 ...gz => sub-milan01_T1w_label-discs_dlabel.nii.gz} | 0 ...milan01_T2star_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...an01_T2star_label-discs_desc-warp_dlabel.nii.gz} | 0 ...json => sub-milan01_T2w_label-discs_dlabel.json} | 0 ...gz => sub-milan01_T2w_label-discs_dlabel.nii.gz} | 0 ...ip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...p-2_mt-off_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ..._mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...-other_T1w_label-vertebrae_desc-C2C5_dlabel.json | 11 +++++++++++ ...her_T1w_label-vertebrae_desc-C2C5_dlabel.nii.gz} | 0 ...b-milan01_space-other_T2star_label-SC_seg.nii.gz | 2 +- ...e-other_T2star_label-discs_desc-warp_dlabel.json | 12 ------------ ...json => sub-milan02_T1w_label-discs_dlabel.json} | 0 ...gz => sub-milan02_T1w_label-discs_dlabel.nii.gz} | 0 ...milan02_T2star_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...an02_T2star_label-discs_desc-warp_dlabel.nii.gz} | 0 ...json => sub-milan02_T2w_label-discs_dlabel.json} | 0 ...gz => sub-milan02_T2w_label-discs_dlabel.nii.gz} | 0 ...ip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...p-2_mt-off_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ..._mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...b-milan02_space-other_T2star_label-SC_seg.nii.gz | 2 +- ...e-other_T2star_label-discs_desc-warp_dlabel.json | 12 ------------ ...json => sub-milan03_T1w_label-discs_dlabel.json} | 0 ...gz => sub-milan03_T1w_label-discs_dlabel.nii.gz} | 0 ...milan03_T2star_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...an03_T2star_label-discs_desc-warp_dlabel.nii.gz} | 0 ...json => sub-milan03_T2w_label-discs_dlabel.json} | 0 ...gz => sub-milan03_T2w_label-discs_dlabel.nii.gz} | 0 ...ip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...p-2_mt-off_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ..._mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...b-milan03_space-other_T2star_label-SC_seg.nii.gz | 2 +- ...e-other_T2star_label-discs_desc-warp_dlabel.json | 12 ------------ ...json => sub-milan04_T1w_label-discs_dlabel.json} | 0 ...gz => sub-milan04_T1w_label-discs_dlabel.nii.gz} | 0 ...milan04_T2star_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...an04_T2star_label-discs_desc-warp_dlabel.nii.gz} | 0 ...json => sub-milan04_T2w_label-discs_dlabel.json} | 0 ...gz => sub-milan04_T2w_label-discs_dlabel.nii.gz} | 0 ...ip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...p-2_mt-off_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ..._mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...b-milan04_space-other_T2star_label-SC_seg.nii.gz | 2 +- ...e-other_T2star_label-discs_desc-warp_dlabel.json | 12 ------------ ...json => sub-milan05_T1w_label-discs_dlabel.json} | 0 ...gz => sub-milan05_T1w_label-discs_dlabel.nii.gz} | 0 ...milan05_T2star_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...an05_T2star_label-discs_desc-warp_dlabel.nii.gz} | 0 ...json => sub-milan05_T2w_label-discs_dlabel.json} | 0 ...gz => sub-milan05_T2w_label-discs_dlabel.nii.gz} | 0 ...ip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...p-2_mt-off_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ..._mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...b-milan05_space-other_T2star_label-SC_seg.nii.gz | 2 +- ...e-other_T2star_label-discs_desc-warp_dlabel.json | 12 ------------ ...json => sub-milan06_T1w_label-discs_dlabel.json} | 0 ...gz => sub-milan06_T1w_label-discs_dlabel.nii.gz} | 0 ...milan06_T2star_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...an06_T2star_label-discs_desc-warp_dlabel.nii.gz} | 0 ...json => sub-milan06_T2w_label-discs_dlabel.json} | 0 ...gz => sub-milan06_T2w_label-discs_dlabel.nii.gz} | 0 ...ip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...p-2_mt-off_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ..._mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...b-milan06_space-other_T2star_label-SC_seg.nii.gz | 2 +- ...e-other_T2star_label-discs_desc-warp_dlabel.json | 12 ------------ ...json => sub-milan07_T1w_label-discs_dlabel.json} | 0 ...gz => sub-milan07_T1w_label-discs_dlabel.nii.gz} | 0 ...milan07_T2star_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...an07_T2star_label-discs_desc-warp_dlabel.nii.gz} | 0 ...json => sub-milan07_T2w_label-discs_dlabel.json} | 0 ...gz => sub-milan07_T2w_label-discs_dlabel.nii.gz} | 0 ...ip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...p-2_mt-off_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ..._mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...b-milan07_space-other_T2star_label-SC_seg.nii.gz | 2 +- ...e-other_T2star_label-discs_desc-warp_dlabel.json | 12 ------------ ...on => sub-mniPilot1_T1w_label-discs_dlabel.json} | 0 ... => sub-mniPilot1_T1w_label-discs_dlabel.nii.gz} | 0 ...iPilot1_T2star_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...lot1_T2star_label-discs_desc-warp_dlabel.nii.gz} | 0 ...on => sub-mniPilot1_T2w_label-discs_dlabel.json} | 0 ... => sub-mniPilot1_T2w_label-discs_dlabel.nii.gz} | 0 ...ip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...p-2_mt-off_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ..._mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...-other_T1w_label-vertebrae_desc-C2C5_dlabel.json | 11 +++++++++++ ...her_T1w_label-vertebrae_desc-C2C5_dlabel.nii.gz} | 0 ...mniPilot1_space-other_T2star_label-SC_seg.nii.gz | 2 +- ...e-other_T2star_label-discs_desc-warp_dlabel.json | 12 ------------ ....json => sub-mniS01_T1w_label-discs_dlabel.json} | 0 ....gz => sub-mniS01_T1w_label-discs_dlabel.nii.gz} | 0 ...-mniS01_T2star_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...iS01_T2star_label-discs_desc-warp_dlabel.nii.gz} | 0 ....json => sub-mniS01_T2w_label-discs_dlabel.json} | 0 ....gz => sub-mniS01_T2w_label-discs_dlabel.nii.gz} | 0 ...ip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...p-2_mt-off_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ..._mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...ub-mniS01_space-other_T2star_label-SC_seg.nii.gz | 2 +- ...e-other_T2star_label-discs_desc-warp_dlabel.json | 12 ------------ ....json => sub-mniS02_T1w_label-discs_dlabel.json} | 0 ....gz => sub-mniS02_T1w_label-discs_dlabel.nii.gz} | 0 ...-mniS02_T2star_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...iS02_T2star_label-discs_desc-warp_dlabel.nii.gz} | 0 ....json => sub-mniS02_T2w_label-discs_dlabel.json} | 0 ....gz => sub-mniS02_T2w_label-discs_dlabel.nii.gz} | 0 ...ip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...p-2_mt-off_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ..._mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...ub-mniS02_space-other_T2star_label-SC_seg.nii.gz | 2 +- ...e-other_T2star_label-discs_desc-warp_dlabel.json | 12 ------------ ....json => sub-mniS03_T1w_label-discs_dlabel.json} | 0 ....gz => sub-mniS03_T1w_label-discs_dlabel.nii.gz} | 0 ...-mniS03_T2star_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...iS03_T2star_label-discs_desc-warp_dlabel.nii.gz} | 0 ....json => sub-mniS03_T2w_label-discs_dlabel.json} | 0 ....gz => sub-mniS03_T2w_label-discs_dlabel.nii.gz} | 0 ...ip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...p-2_mt-off_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ..._mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...ub-mniS03_space-other_T2star_label-SC_seg.nii.gz | 2 +- ...e-other_T2star_label-discs_desc-warp_dlabel.json | 12 ------------ ....json => sub-mniS04_T1w_label-discs_dlabel.json} | 0 ....gz => sub-mniS04_T1w_label-discs_dlabel.nii.gz} | 0 ...-mniS04_T2star_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...iS04_T2star_label-discs_desc-warp_dlabel.nii.gz} | 0 ....json => sub-mniS04_T2w_label-discs_dlabel.json} | 0 ....gz => sub-mniS04_T2w_label-discs_dlabel.nii.gz} | 0 ...ip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...p-2_mt-off_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ..._mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...ub-mniS04_space-other_T2star_label-SC_seg.nii.gz | 2 +- ...e-other_T2star_label-discs_desc-warp_dlabel.json | 12 ------------ ....json => sub-mniS05_T1w_label-discs_dlabel.json} | 0 ....gz => sub-mniS05_T1w_label-discs_dlabel.nii.gz} | 0 ...-mniS05_T2star_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...iS05_T2star_label-discs_desc-warp_dlabel.nii.gz} | 0 ....json => sub-mniS05_T2w_label-discs_dlabel.json} | 0 ....gz => sub-mniS05_T2w_label-discs_dlabel.nii.gz} | 0 ...ip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...p-2_mt-off_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ..._mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...-mniS05_space-other_T2star_gmlabel-SC_seg.nii.gz | 2 +- ...ub-mniS05_space-other_T2star_label-SC_seg.nii.gz | 2 +- ...e-other_T2star_label-discs_desc-warp_dlabel.json | 12 ------------ ....json => sub-mniS06_T1w_label-discs_dlabel.json} | 0 ....gz => sub-mniS06_T1w_label-discs_dlabel.nii.gz} | 0 ...-mniS06_T2star_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...iS06_T2star_label-discs_desc-warp_dlabel.nii.gz} | 0 ....json => sub-mniS06_T2w_label-discs_dlabel.json} | 0 ....gz => sub-mniS06_T2w_label-discs_dlabel.nii.gz} | 0 ...ip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...p-2_mt-off_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ..._mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...ub-mniS06_space-other_T2star_label-SC_seg.nii.gz | 2 +- ...e-other_T2star_label-discs_desc-warp_dlabel.json | 12 ------------ ....json => sub-mniS07_T1w_label-discs_dlabel.json} | 0 ....gz => sub-mniS07_T1w_label-discs_dlabel.nii.gz} | 0 ...-mniS07_T2star_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...iS07_T2star_label-discs_desc-warp_dlabel.nii.gz} | 0 ....json => sub-mniS07_T2w_label-discs_dlabel.json} | 0 ....gz => sub-mniS07_T2w_label-discs_dlabel.nii.gz} | 0 ...ip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...p-2_mt-off_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ..._mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...ub-mniS07_space-other_T2star_label-SC_seg.nii.gz | 2 +- ...e-other_T2star_label-discs_desc-warp_dlabel.json | 12 ------------ ....json => sub-mniS08_T1w_label-discs_dlabel.json} | 0 ....gz => sub-mniS08_T1w_label-discs_dlabel.nii.gz} | 0 ...-mniS08_T2star_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...iS08_T2star_label-discs_desc-warp_dlabel.nii.gz} | 0 ....json => sub-mniS08_T2w_label-discs_dlabel.json} | 0 ....gz => sub-mniS08_T2w_label-discs_dlabel.nii.gz} | 0 ...ip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...p-2_mt-off_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ..._mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...ub-mniS08_space-other_T2star_label-SC_seg.nii.gz | 2 +- ...e-other_T2star_label-discs_desc-warp_dlabel.json | 12 ------------ ....json => sub-mniS09_T1w_label-discs_dlabel.json} | 0 ....gz => sub-mniS09_T1w_label-discs_dlabel.nii.gz} | 0 ...-mniS09_T2star_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...iS09_T2star_label-discs_desc-warp_dlabel.nii.gz} | 0 ....json => sub-mniS09_T2w_label-discs_dlabel.json} | 0 ....gz => sub-mniS09_T2w_label-discs_dlabel.nii.gz} | 0 ...ip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...p-2_mt-off_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ..._mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...ub-mniS09_space-other_T2star_label-SC_seg.nii.gz | 2 +- ...e-other_T2star_label-discs_desc-warp_dlabel.json | 12 ------------ ...=> sub-mountSinai01_T1w_label-discs_dlabel.json} | 0 ... sub-mountSinai01_T1w_label-discs_dlabel.nii.gz} | 0 ...Sinai01_T2star_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...ai01_T2star_label-discs_desc-warp_dlabel.nii.gz} | 0 ...=> sub-mountSinai01_T2w_label-discs_dlabel.json} | 0 ... sub-mountSinai01_T2w_label-discs_dlabel.nii.gz} | 0 ...ip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...p-2_mt-off_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ..._mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...ntSinai01_space-other_T2star_label-SC_seg.nii.gz | 2 +- ...e-other_T2star_label-discs_desc-warp_dlabel.json | 12 ------------ ...=> sub-mountSinai02_T1w_label-discs_dlabel.json} | 0 ... sub-mountSinai02_T1w_label-discs_dlabel.nii.gz} | 0 ...Sinai02_T2star_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...ai02_T2star_label-discs_desc-warp_dlabel.nii.gz} | 0 ...=> sub-mountSinai02_T2w_label-discs_dlabel.json} | 0 ... sub-mountSinai02_T2w_label-discs_dlabel.nii.gz} | 0 ...ip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...p-2_mt-off_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ..._mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...ntSinai02_space-other_T2star_label-SC_seg.nii.gz | 2 +- ...e-other_T2star_label-discs_desc-warp_dlabel.json | 12 ------------ ...=> sub-mountSinai03_T1w_label-discs_dlabel.json} | 0 ... sub-mountSinai03_T1w_label-discs_dlabel.nii.gz} | 0 ...=> sub-mountSinai03_T2w_label-discs_dlabel.json} | 0 ... sub-mountSinai03_T2w_label-discs_dlabel.nii.gz} | 0 ...ntSinai03_space-other_T2star_label-SC_seg.nii.gz | 2 +- ...=> sub-mountSinai04_T1w_label-discs_dlabel.json} | 0 ... sub-mountSinai04_T1w_label-discs_dlabel.nii.gz} | 0 ...Sinai04_T2star_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...ai04_T2star_label-discs_desc-warp_dlabel.nii.gz} | 0 ...=> sub-mountSinai04_T2w_label-discs_dlabel.json} | 0 ... sub-mountSinai04_T2w_label-discs_dlabel.nii.gz} | 0 ...ip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...p-2_mt-off_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ..._mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...ntSinai04_space-other_T2star_label-SC_seg.nii.gz | 2 +- ...e-other_T2star_label-discs_desc-warp_dlabel.json | 12 ------------ ...=> sub-mountSinai05_T1w_label-discs_dlabel.json} | 0 ... sub-mountSinai05_T1w_label-discs_dlabel.nii.gz} | 0 ...Sinai05_T2star_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...ai05_T2star_label-discs_desc-warp_dlabel.nii.gz} | 0 ...=> sub-mountSinai05_T2w_label-discs_dlabel.json} | 0 ... sub-mountSinai05_T2w_label-discs_dlabel.nii.gz} | 0 ...ip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...p-2_mt-off_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ..._mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...ntSinai05_space-other_T2star_label-SC_seg.nii.gz | 2 +- ...e-other_T2star_label-discs_desc-warp_dlabel.json | 12 ------------ ...=> sub-mountSinai06_T1w_label-discs_dlabel.json} | 0 ... sub-mountSinai06_T1w_label-discs_dlabel.nii.gz} | 0 ...Sinai06_T2star_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...ai06_T2star_label-discs_desc-warp_dlabel.nii.gz} | 0 ...=> sub-mountSinai06_T2w_label-discs_dlabel.json} | 0 ... sub-mountSinai06_T2w_label-discs_dlabel.nii.gz} | 0 ...ip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...p-2_mt-off_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ..._mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...ntSinai06_space-other_T2star_label-SC_seg.nii.gz | 2 +- ...e-other_T2star_label-discs_desc-warp_dlabel.json | 12 ------------ ...son => sub-mpicbs01_T1w_label-discs_dlabel.json} | 0 ...z => sub-mpicbs01_T1w_label-discs_dlabel.nii.gz} | 0 ...picbs01_T2star_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...bs01_T2star_label-discs_desc-warp_dlabel.nii.gz} | 0 ...son => sub-mpicbs01_T2w_label-discs_dlabel.json} | 0 ...z => sub-mpicbs01_T2w_label-discs_dlabel.nii.gz} | 0 ...ip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...p-2_mt-off_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ..._mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...-other_T1w_label-vertebrae_desc-C2C5_dlabel.json | 11 +++++++++++ ...her_T1w_label-vertebrae_desc-C2C5_dlabel.nii.gz} | 0 ...-mpicbs01_space-other_T2star_label-SC_seg.nii.gz | 2 +- ...e-other_T2star_label-discs_desc-warp_dlabel.json | 12 ------------ ...son => sub-mpicbs02_T1w_label-discs_dlabel.json} | 0 ...z => sub-mpicbs02_T1w_label-discs_dlabel.nii.gz} | 0 ...picbs02_T2star_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...bs02_T2star_label-discs_desc-warp_dlabel.nii.gz} | 0 ...son => sub-mpicbs02_T2w_label-discs_dlabel.json} | 0 ...z => sub-mpicbs02_T2w_label-discs_dlabel.nii.gz} | 0 ...ip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...p-2_mt-off_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ..._mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...-mpicbs02_space-other_T2star_label-SC_seg.nii.gz | 2 +- ...e-other_T2star_label-discs_desc-warp_dlabel.json | 12 ------------ ...son => sub-mpicbs03_T1w_label-discs_dlabel.json} | 0 ...z => sub-mpicbs03_T1w_label-discs_dlabel.nii.gz} | 0 ...picbs03_T2star_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...bs03_T2star_label-discs_desc-warp_dlabel.nii.gz} | 0 ...son => sub-mpicbs03_T2w_label-discs_dlabel.json} | 0 ...z => sub-mpicbs03_T2w_label-discs_dlabel.nii.gz} | 0 ...ip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...p-2_mt-off_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ..._mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...-mpicbs03_space-other_T2star_label-SC_seg.nii.gz | 2 +- ...e-other_T2star_label-discs_desc-warp_dlabel.json | 12 ------------ ...son => sub-mpicbs05_T1w_label-discs_dlabel.json} | 0 ...z => sub-mpicbs05_T1w_label-discs_dlabel.nii.gz} | 0 ...picbs05_T2star_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...bs05_T2star_label-discs_desc-warp_dlabel.nii.gz} | 0 ...son => sub-mpicbs05_T2w_label-discs_dlabel.json} | 0 ...z => sub-mpicbs05_T2w_label-discs_dlabel.nii.gz} | 0 ...ip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...p-2_mt-off_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ..._mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...-mpicbs05_space-other_T2star_label-SC_seg.nii.gz | 2 +- ...e-other_T2star_label-discs_desc-warp_dlabel.json | 12 ------------ ...son => sub-mpicbs06_T1w_label-discs_dlabel.json} | 0 ...z => sub-mpicbs06_T1w_label-discs_dlabel.nii.gz} | 0 ...picbs06_T2star_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...bs06_T2star_label-discs_desc-warp_dlabel.nii.gz} | 0 ...son => sub-mpicbs06_T2w_label-discs_dlabel.json} | 0 ...z => sub-mpicbs06_T2w_label-discs_dlabel.nii.gz} | 0 ...ip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...p-2_mt-off_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ..._mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...-mpicbs06_space-other_T2star_label-SC_seg.nii.gz | 2 +- ...e-other_T2star_label-discs_desc-warp_dlabel.json | 12 ------------ ...son => sub-mpicbs07_T1w_label-discs_dlabel.json} | 0 ...z => sub-mpicbs07_T1w_label-discs_dlabel.nii.gz} | 0 ...picbs07_T2star_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...bs07_T2star_label-discs_desc-warp_dlabel.nii.gz} | 0 ...son => sub-mpicbs07_T2w_label-discs_dlabel.json} | 0 ...z => sub-mpicbs07_T2w_label-discs_dlabel.nii.gz} | 0 ...ip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...p-2_mt-off_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ..._mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...-mpicbs07_space-other_T2star_label-SC_seg.nii.gz | 2 +- ...e-other_T2star_label-discs_desc-warp_dlabel.json | 12 ------------ ...on => sub-nottwil01_T1w_label-discs_dlabel.json} | 0 ... => sub-nottwil01_T1w_label-discs_dlabel.nii.gz} | 0 ...ttwil01_T2star_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...il01_T2star_label-discs_desc-warp_dlabel.nii.gz} | 0 ...on => sub-nottwil01_T2w_label-discs_dlabel.json} | 0 ... => sub-nottwil01_T2w_label-discs_dlabel.nii.gz} | 0 ...ip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...p-2_mt-off_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ..._mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...ttwil01_space-other_T2star_gmlabel-SC_seg.nii.gz | 2 +- ...nottwil01_space-other_T2star_label-SC_seg.nii.gz | 2 +- ...e-other_T2star_label-discs_desc-warp_dlabel.json | 12 ------------ ...ub-nottwil01_space-other_T2w_label-CSF_seg.json} | 0 ...-nottwil01_space-other_T2w_label-CSF_seg.nii.gz} | 0 ...b-nottwil01_space-other_T2w_label-canal_seg.json | 11 +++++++++++ ...nottwil01_space-other_T2w_label-canal_seg.nii.gz | 1 + ...on => sub-nottwil02_T1w_label-discs_dlabel.json} | 0 ... => sub-nottwil02_T1w_label-discs_dlabel.nii.gz} | 0 ...ttwil02_T2star_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...il02_T2star_label-discs_desc-warp_dlabel.nii.gz} | 0 ...on => sub-nottwil02_T2w_label-discs_dlabel.json} | 0 ... => sub-nottwil02_T2w_label-discs_dlabel.nii.gz} | 0 ...ip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...p-2_mt-off_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ..._mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...nottwil02_space-other_T2star_label-SC_seg.nii.gz | 2 +- ...e-other_T2star_label-discs_desc-warp_dlabel.json | 12 ------------ ...on => sub-nottwil03_T1w_label-discs_dlabel.json} | 0 ... => sub-nottwil03_T1w_label-discs_dlabel.nii.gz} | 0 ...ttwil03_T2star_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...il03_T2star_label-discs_desc-warp_dlabel.nii.gz} | 0 ...on => sub-nottwil03_T2w_label-discs_dlabel.json} | 0 ... => sub-nottwil03_T2w_label-discs_dlabel.nii.gz} | 0 ...ip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...p-2_mt-off_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ..._mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...ttwil03_space-other_T2star_gmlabel-SC_seg.nii.gz | 2 +- ...nottwil03_space-other_T2star_label-SC_seg.nii.gz | 2 +- ...e-other_T2star_label-discs_desc-warp_dlabel.json | 12 ------------ ...ub-nottwil03_space-other_T2w_label-CSF_seg.json} | 0 ...-nottwil03_space-other_T2w_label-CSF_seg.nii.gz} | 0 ...b-nottwil03_space-other_T2w_label-canal_seg.json | 11 +++++++++++ ...nottwil03_space-other_T2w_label-canal_seg.nii.gz | 1 + ...on => sub-nottwil04_T1w_label-discs_dlabel.json} | 0 ... => sub-nottwil04_T1w_label-discs_dlabel.nii.gz} | 0 ...ttwil04_T2star_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...il04_T2star_label-discs_desc-warp_dlabel.nii.gz} | 0 ...on => sub-nottwil04_T2w_label-discs_dlabel.json} | 0 ... => sub-nottwil04_T2w_label-discs_dlabel.nii.gz} | 0 ...ip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...p-2_mt-off_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ..._mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...nottwil04_space-other_T2star_label-SC_seg.nii.gz | 2 +- ...e-other_T2star_label-discs_desc-warp_dlabel.json | 12 ------------ ...ub-nottwil04_space-other_T2w_label-CSF_seg.json} | 0 ...-nottwil04_space-other_T2w_label-CSF_seg.nii.gz} | 0 ...b-nottwil04_space-other_T2w_label-canal_seg.json | 11 +++++++++++ ...nottwil04_space-other_T2w_label-canal_seg.nii.gz | 1 + ...on => sub-nottwil05_T1w_label-discs_dlabel.json} | 0 ... => sub-nottwil05_T1w_label-discs_dlabel.nii.gz} | 0 ...ttwil05_T2star_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...il05_T2star_label-discs_desc-warp_dlabel.nii.gz} | 0 ...on => sub-nottwil05_T2w_label-discs_dlabel.json} | 0 ... => sub-nottwil05_T2w_label-discs_dlabel.nii.gz} | 0 ...ip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...p-2_mt-off_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ..._mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...nottwil05_space-other_T2star_label-SC_seg.nii.gz | 2 +- ...e-other_T2star_label-discs_desc-warp_dlabel.json | 12 ------------ ...on => sub-nottwil06_T1w_label-discs_dlabel.json} | 0 ... => sub-nottwil06_T1w_label-discs_dlabel.nii.gz} | 0 ...ttwil06_T2star_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...il06_T2star_label-discs_desc-warp_dlabel.nii.gz} | 0 ...on => sub-nottwil06_T2w_label-discs_dlabel.json} | 0 ... => sub-nottwil06_T2w_label-discs_dlabel.nii.gz} | 0 ...ip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...p-2_mt-off_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ..._mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...nottwil06_space-other_T2star_label-SC_seg.nii.gz | 2 +- ...e-other_T2star_label-discs_desc-warp_dlabel.json | 12 ------------ ...l.json => sub-nwu01_T1w_label-discs_dlabel.json} | 0 ...i.gz => sub-nwu01_T1w_label-discs_dlabel.nii.gz} | 0 ...b-nwu01_T2star_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...wu01_T2star_label-discs_desc-warp_dlabel.nii.gz} | 0 ...l.json => sub-nwu01_T2w_label-discs_dlabel.json} | 0 ...i.gz => sub-nwu01_T2w_label-discs_dlabel.nii.gz} | 0 ...ip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...p-2_mt-off_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ..._mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...sub-nwu01_space-other_T2star_label-SC_seg.nii.gz | 2 +- ...e-other_T2star_label-discs_desc-warp_dlabel.json | 12 ------------ ...l.json => sub-nwu02_T1w_label-discs_dlabel.json} | 0 ...i.gz => sub-nwu02_T1w_label-discs_dlabel.nii.gz} | 0 ...b-nwu02_T2star_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...wu02_T2star_label-discs_desc-warp_dlabel.nii.gz} | 0 ...l.json => sub-nwu02_T2w_label-discs_dlabel.json} | 0 ...i.gz => sub-nwu02_T2w_label-discs_dlabel.nii.gz} | 0 ...ip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...p-2_mt-off_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ..._mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...sub-nwu02_space-other_T2star_label-SC_seg.nii.gz | 2 +- ...e-other_T2star_label-discs_desc-warp_dlabel.json | 12 ------------ ...l.json => sub-nwu03_T1w_label-discs_dlabel.json} | 0 ...i.gz => sub-nwu03_T1w_label-discs_dlabel.nii.gz} | 0 ...b-nwu03_T2star_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...wu03_T2star_label-discs_desc-warp_dlabel.nii.gz} | 0 ...l.json => sub-nwu03_T2w_label-discs_dlabel.json} | 0 ...i.gz => sub-nwu03_T2w_label-discs_dlabel.nii.gz} | 0 ...ip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...p-2_mt-off_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ..._mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...sub-nwu03_space-other_T2star_label-SC_seg.nii.gz | 2 +- ...e-other_T2star_label-discs_desc-warp_dlabel.json | 12 ------------ ...l.json => sub-nwu04_T1w_label-discs_dlabel.json} | 0 ...i.gz => sub-nwu04_T1w_label-discs_dlabel.nii.gz} | 0 ...b-nwu04_T2star_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...wu04_T2star_label-discs_desc-warp_dlabel.nii.gz} | 0 ...l.json => sub-nwu04_T2w_label-discs_dlabel.json} | 0 ...i.gz => sub-nwu04_T2w_label-discs_dlabel.nii.gz} | 0 ...ip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...p-2_mt-off_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ..._mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...sub-nwu04_space-other_T2star_label-SC_seg.nii.gz | 2 +- ...e-other_T2star_label-discs_desc-warp_dlabel.json | 12 ------------ ...l.json => sub-nwu05_T1w_label-discs_dlabel.json} | 0 ...i.gz => sub-nwu05_T1w_label-discs_dlabel.nii.gz} | 0 ...b-nwu05_T2star_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...wu05_T2star_label-discs_desc-warp_dlabel.nii.gz} | 0 ...l.json => sub-nwu05_T2w_label-discs_dlabel.json} | 0 ...i.gz => sub-nwu05_T2w_label-discs_dlabel.nii.gz} | 0 ...ip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...p-2_mt-off_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ..._mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...sub-nwu05_space-other_T2star_label-SC_seg.nii.gz | 2 +- ...e-other_T2star_label-discs_desc-warp_dlabel.json | 12 ------------ ...l.json => sub-nwu06_T1w_label-discs_dlabel.json} | 0 ...i.gz => sub-nwu06_T1w_label-discs_dlabel.nii.gz} | 0 ...b-nwu06_T2star_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...wu06_T2star_label-discs_desc-warp_dlabel.nii.gz} | 0 ...l.json => sub-nwu06_T2w_label-discs_dlabel.json} | 0 ...i.gz => sub-nwu06_T2w_label-discs_dlabel.nii.gz} | 0 ...ip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...p-2_mt-off_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ..._mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...sub-nwu06_space-other_T2star_label-SC_seg.nii.gz | 2 +- ...e-other_T2star_label-discs_desc-warp_dlabel.json | 12 ------------ ...> sub-oxfordFmrib01_T1w_label-discs_dlabel.json} | 0 ...sub-oxfordFmrib01_T1w_label-discs_dlabel.nii.gz} | 0 ...> sub-oxfordFmrib01_T2w_label-discs_dlabel.json} | 0 ...sub-oxfordFmrib01_T2w_label-discs_dlabel.nii.gz} | 0 ...rdFmrib01_space-other_T2star_label-SC_seg.nii.gz | 2 +- ...> sub-oxfordFmrib02_T1w_label-discs_dlabel.json} | 0 ...sub-oxfordFmrib02_T1w_label-discs_dlabel.nii.gz} | 0 ...Fmrib02_T2star_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...ib02_T2star_label-discs_desc-warp_dlabel.nii.gz} | 0 ...> sub-oxfordFmrib02_T2w_label-discs_dlabel.json} | 0 ...sub-oxfordFmrib02_T2w_label-discs_dlabel.nii.gz} | 0 ...ip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...p-2_mt-off_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ..._mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...rdFmrib02_space-other_T2star_label-SC_seg.nii.gz | 2 +- ...e-other_T2star_label-discs_desc-warp_dlabel.json | 12 ------------ ...> sub-oxfordFmrib03_T1w_label-discs_dlabel.json} | 0 ...sub-oxfordFmrib03_T1w_label-discs_dlabel.nii.gz} | 0 ...Fmrib03_T2star_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...ib03_T2star_label-discs_desc-warp_dlabel.nii.gz} | 0 ...> sub-oxfordFmrib03_T2w_label-discs_dlabel.json} | 0 ...sub-oxfordFmrib03_T2w_label-discs_dlabel.nii.gz} | 0 ...ip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...p-2_mt-off_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ..._mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...-other_T1w_label-vertebrae_desc-C2C5_dlabel.json | 11 +++++++++++ ...her_T1w_label-vertebrae_desc-C2C5_dlabel.nii.gz} | 0 ...rdFmrib03_space-other_T2star_label-SC_seg.nii.gz | 2 +- ...e-other_T2star_label-discs_desc-warp_dlabel.json | 12 ------------ ...> sub-oxfordFmrib04_T1w_label-discs_dlabel.json} | 0 ...sub-oxfordFmrib04_T1w_label-discs_dlabel.nii.gz} | 0 ...> sub-oxfordFmrib04_T2w_label-discs_dlabel.json} | 0 ...sub-oxfordFmrib04_T2w_label-discs_dlabel.nii.gz} | 0 ...rdFmrib04_space-other_T2star_label-SC_seg.nii.gz | 2 +- ...> sub-oxfordFmrib05_T1w_label-discs_dlabel.json} | 0 ...sub-oxfordFmrib05_T1w_label-discs_dlabel.nii.gz} | 0 ...Fmrib05_T2star_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...ib05_T2star_label-discs_desc-warp_dlabel.nii.gz} | 0 ...> sub-oxfordFmrib05_T2w_label-discs_dlabel.json} | 0 ...sub-oxfordFmrib05_T2w_label-discs_dlabel.nii.gz} | 0 ...ip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...p-2_mt-off_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ..._mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...-other_T1w_label-vertebrae_desc-C2C5_dlabel.json | 11 +++++++++++ ...her_T1w_label-vertebrae_desc-C2C5_dlabel.nii.gz} | 0 ...rdFmrib05_space-other_T2star_label-SC_seg.nii.gz | 2 +- ...e-other_T2star_label-discs_desc-warp_dlabel.json | 12 ------------ ...> sub-oxfordFmrib06_T1w_label-discs_dlabel.json} | 0 ...sub-oxfordFmrib06_T1w_label-discs_dlabel.nii.gz} | 0 ...Fmrib06_T2star_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...ib06_T2star_label-discs_desc-warp_dlabel.nii.gz} | 0 ...> sub-oxfordFmrib06_T2w_label-discs_dlabel.json} | 0 ...sub-oxfordFmrib06_T2w_label-discs_dlabel.nii.gz} | 0 ...ip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...p-2_mt-off_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ..._mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...-other_T1w_label-vertebrae_desc-C2C5_dlabel.json | 11 +++++++++++ ...her_T1w_label-vertebrae_desc-C2C5_dlabel.nii.gz} | 0 ...rdFmrib06_space-other_T2star_label-SC_seg.nii.gz | 2 +- ...e-other_T2star_label-discs_desc-warp_dlabel.json | 12 ------------ ...> sub-oxfordFmrib07_T1w_label-discs_dlabel.json} | 0 ...sub-oxfordFmrib07_T1w_label-discs_dlabel.nii.gz} | 0 ...Fmrib07_T2star_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...ib07_T2star_label-discs_desc-warp_dlabel.nii.gz} | 0 ...> sub-oxfordFmrib07_T2w_label-discs_dlabel.json} | 0 ...sub-oxfordFmrib07_T2w_label-discs_dlabel.nii.gz} | 0 ...ip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...p-2_mt-off_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ..._mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...-other_T1w_label-vertebrae_desc-C2C5_dlabel.json | 11 +++++++++++ ...her_T1w_label-vertebrae_desc-C2C5_dlabel.nii.gz} | 0 ...rdFmrib07_space-other_T2star_label-SC_seg.nii.gz | 2 +- ...e-other_T2star_label-discs_desc-warp_dlabel.json | 12 ------------ ...> sub-oxfordFmrib08_T1w_label-discs_dlabel.json} | 0 ...sub-oxfordFmrib08_T1w_label-discs_dlabel.nii.gz} | 0 ...Fmrib08_T2star_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...ib08_T2star_label-discs_desc-warp_dlabel.nii.gz} | 0 ...> sub-oxfordFmrib08_T2w_label-discs_dlabel.json} | 0 ...sub-oxfordFmrib08_T2w_label-discs_dlabel.nii.gz} | 0 ...ip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...p-2_mt-off_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ..._mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...rdFmrib08_space-other_T2star_label-SC_seg.nii.gz | 2 +- ...e-other_T2star_label-discs_desc-warp_dlabel.json | 12 ------------ ...> sub-oxfordFmrib09_T1w_label-discs_dlabel.json} | 0 ...sub-oxfordFmrib09_T1w_label-discs_dlabel.nii.gz} | 0 ...Fmrib09_T2star_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...ib09_T2star_label-discs_desc-warp_dlabel.nii.gz} | 0 ...> sub-oxfordFmrib09_T2w_label-discs_dlabel.json} | 0 ...sub-oxfordFmrib09_T2w_label-discs_dlabel.nii.gz} | 0 ...ip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...p-2_mt-off_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ..._mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...rdFmrib09_space-other_T2star_label-SC_seg.nii.gz | 2 +- ...e-other_T2star_label-discs_desc-warp_dlabel.json | 12 ------------ ...> sub-oxfordFmrib10_T1w_label-discs_dlabel.json} | 0 ...sub-oxfordFmrib10_T1w_label-discs_dlabel.nii.gz} | 0 ...Fmrib10_T2star_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...ib10_T2star_label-discs_desc-warp_dlabel.nii.gz} | 0 ...> sub-oxfordFmrib10_T2w_label-discs_dlabel.json} | 0 ...sub-oxfordFmrib10_T2w_label-discs_dlabel.nii.gz} | 0 ...ip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...p-2_mt-off_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ..._mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...rdFmrib10_space-other_T2star_label-SC_seg.nii.gz | 2 +- ...e-other_T2star_label-discs_desc-warp_dlabel.json | 12 ------------ ...> sub-oxfordFmrib11_T1w_label-discs_dlabel.json} | 0 ...sub-oxfordFmrib11_T1w_label-discs_dlabel.nii.gz} | 0 ...Fmrib11_T2star_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...ib11_T2star_label-discs_desc-warp_dlabel.nii.gz} | 0 ...> sub-oxfordFmrib11_T2w_label-discs_dlabel.json} | 0 ...sub-oxfordFmrib11_T2w_label-discs_dlabel.nii.gz} | 0 ...ip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...p-2_mt-off_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ..._mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...rdFmrib11_space-other_T2star_label-SC_seg.nii.gz | 2 +- ...e-other_T2star_label-discs_desc-warp_dlabel.json | 12 ------------ ...=> sub-oxfordOhba01_T1w_label-discs_dlabel.json} | 0 ... sub-oxfordOhba01_T1w_label-discs_dlabel.nii.gz} | 0 ...dOhba01_T2star_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...ba01_T2star_label-discs_desc-warp_dlabel.nii.gz} | 0 ...=> sub-oxfordOhba01_T2w_label-discs_dlabel.json} | 0 ... sub-oxfordOhba01_T2w_label-discs_dlabel.nii.gz} | 0 ...ip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...p-2_mt-off_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ..._mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...ordOhba01_space-other_T2star_label-SC_seg.nii.gz | 2 +- ...e-other_T2star_label-discs_desc-warp_dlabel.json | 12 ------------ ...=> sub-oxfordOhba02_T1w_label-discs_dlabel.json} | 0 ... sub-oxfordOhba02_T1w_label-discs_dlabel.nii.gz} | 0 ...=> sub-oxfordOhba02_T2w_label-discs_dlabel.json} | 0 ... sub-oxfordOhba02_T2w_label-discs_dlabel.nii.gz} | 0 ...ordOhba02_space-other_T2star_label-SC_seg.nii.gz | 2 +- ...=> sub-oxfordOhba03_T1w_label-discs_dlabel.json} | 0 ... sub-oxfordOhba03_T1w_label-discs_dlabel.nii.gz} | 0 ...dOhba03_T2star_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...ba03_T2star_label-discs_desc-warp_dlabel.nii.gz} | 0 ...=> sub-oxfordOhba03_T2w_label-discs_dlabel.json} | 0 ... sub-oxfordOhba03_T2w_label-discs_dlabel.nii.gz} | 0 ...ip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...p-2_mt-off_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ..._mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...ordOhba03_space-other_T2star_label-SC_seg.nii.gz | 2 +- ...e-other_T2star_label-discs_desc-warp_dlabel.json | 12 ------------ ...=> sub-oxfordOhba04_T1w_label-discs_dlabel.json} | 0 ... sub-oxfordOhba04_T1w_label-discs_dlabel.nii.gz} | 0 ...dOhba04_T2star_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...ba04_T2star_label-discs_desc-warp_dlabel.nii.gz} | 0 ...=> sub-oxfordOhba04_T2w_label-discs_dlabel.json} | 0 ... sub-oxfordOhba04_T2w_label-discs_dlabel.nii.gz} | 0 ...ip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...p-2_mt-off_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ..._mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...ordOhba04_space-other_T2star_label-SC_seg.nii.gz | 2 +- ...e-other_T2star_label-discs_desc-warp_dlabel.json | 12 ------------ ...=> sub-oxfordOhba05_T1w_label-discs_dlabel.json} | 0 ... sub-oxfordOhba05_T1w_label-discs_dlabel.nii.gz} | 0 ...dOhba05_T2star_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...ba05_T2star_label-discs_desc-warp_dlabel.nii.gz} | 0 ...=> sub-oxfordOhba05_T2w_label-discs_dlabel.json} | 0 ... sub-oxfordOhba05_T2w_label-discs_dlabel.nii.gz} | 0 ...ip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...p-2_mt-off_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ..._mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...-other_T1w_label-vertebrae_desc-C2C5_dlabel.json | 11 +++++++++++ ...her_T1w_label-vertebrae_desc-C2C5_dlabel.nii.gz} | 0 ...ordOhba05_space-other_T2star_label-SC_seg.nii.gz | 2 +- ...e-other_T2star_label-discs_desc-warp_dlabel.json | 12 ------------ ...json => sub-pavia01_T1w_label-discs_dlabel.json} | 0 ...gz => sub-pavia01_T1w_label-discs_dlabel.nii.gz} | 0 ...pavia01_T2star_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...ia01_T2star_label-discs_desc-warp_dlabel.nii.gz} | 0 ...json => sub-pavia01_T2w_label-discs_dlabel.json} | 0 ...gz => sub-pavia01_T2w_label-discs_dlabel.nii.gz} | 0 ...ip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...p-2_mt-off_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ..._mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...b-pavia01_space-other_T2star_label-SC_seg.nii.gz | 2 +- ...e-other_T2star_label-discs_desc-warp_dlabel.json | 12 ------------ ...json => sub-pavia02_T1w_label-discs_dlabel.json} | 0 ...gz => sub-pavia02_T1w_label-discs_dlabel.nii.gz} | 0 ...pavia02_T2star_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...ia02_T2star_label-discs_desc-warp_dlabel.nii.gz} | 0 ...json => sub-pavia02_T2w_label-discs_dlabel.json} | 0 ...gz => sub-pavia02_T2w_label-discs_dlabel.nii.gz} | 0 ...ip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...p-2_mt-off_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ..._mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...b-pavia02_space-other_T2star_label-SC_seg.nii.gz | 2 +- ...e-other_T2star_label-discs_desc-warp_dlabel.json | 12 ------------ ...json => sub-pavia03_T1w_label-discs_dlabel.json} | 0 ...gz => sub-pavia03_T1w_label-discs_dlabel.nii.gz} | 0 ...pavia03_T2star_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...ia03_T2star_label-discs_desc-warp_dlabel.nii.gz} | 0 ...json => sub-pavia03_T2w_label-discs_dlabel.json} | 0 ...gz => sub-pavia03_T2w_label-discs_dlabel.nii.gz} | 0 ...ip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...p-2_mt-off_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ..._mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...-other_T1w_label-vertebrae_desc-C2C5_dlabel.json | 11 +++++++++++ ...her_T1w_label-vertebrae_desc-C2C5_dlabel.nii.gz} | 0 ...b-pavia03_space-other_T2star_label-SC_seg.nii.gz | 2 +- ...e-other_T2star_label-discs_desc-warp_dlabel.json | 12 ------------ ...json => sub-pavia04_T1w_label-discs_dlabel.json} | 0 ...gz => sub-pavia04_T1w_label-discs_dlabel.nii.gz} | 0 ...pavia04_T2star_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...ia04_T2star_label-discs_desc-warp_dlabel.nii.gz} | 0 ...json => sub-pavia04_T2w_label-discs_dlabel.json} | 0 ...gz => sub-pavia04_T2w_label-discs_dlabel.nii.gz} | 0 ...ip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...p-2_mt-off_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ..._mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...b-pavia04_space-other_T2star_label-SC_seg.nii.gz | 2 +- ...e-other_T2star_label-discs_desc-warp_dlabel.json | 12 ------------ ... sub-pavia04_space-other_T2w_label-CSF_seg.json} | 0 ...ub-pavia04_space-other_T2w_label-CSF_seg.nii.gz} | 0 ...sub-pavia04_space-other_T2w_label-canal_seg.json | 11 +++++++++++ ...b-pavia04_space-other_T2w_label-canal_seg.nii.gz | 1 + ...json => sub-pavia05_T1w_label-discs_dlabel.json} | 0 ...gz => sub-pavia05_T1w_label-discs_dlabel.nii.gz} | 0 ...pavia05_T2star_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...ia05_T2star_label-discs_desc-warp_dlabel.nii.gz} | 0 ...json => sub-pavia05_T2w_label-discs_dlabel.json} | 0 ...gz => sub-pavia05_T2w_label-discs_dlabel.nii.gz} | 0 ...ip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...p-2_mt-off_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ..._mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...b-pavia05_space-other_T2star_label-SC_seg.nii.gz | 2 +- ...e-other_T2star_label-discs_desc-warp_dlabel.json | 12 ------------ ...json => sub-pavia06_T1w_label-discs_dlabel.json} | 0 ...gz => sub-pavia06_T1w_label-discs_dlabel.nii.gz} | 0 ...pavia06_T2star_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...ia06_T2star_label-discs_desc-warp_dlabel.nii.gz} | 0 ...json => sub-pavia06_T2w_label-discs_dlabel.json} | 0 ...gz => sub-pavia06_T2w_label-discs_dlabel.nii.gz} | 0 ...ip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...p-2_mt-off_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ..._mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...b-pavia06_space-other_T2star_label-SC_seg.nii.gz | 2 +- ...e-other_T2star_label-discs_desc-warp_dlabel.json | 12 ------------ ...on => sub-perform01_T1w_label-discs_dlabel.json} | 0 ... => sub-perform01_T1w_label-discs_dlabel.nii.gz} | 0 ...rform01_T2star_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...rm01_T2star_label-discs_desc-warp_dlabel.nii.gz} | 0 ...on => sub-perform01_T2w_label-discs_dlabel.json} | 0 ... => sub-perform01_T2w_label-discs_dlabel.nii.gz} | 0 ...ip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...p-2_mt-off_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ..._mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...perform01_space-other_T2star_label-SC_seg.nii.gz | 2 +- ...e-other_T2star_label-discs_desc-warp_dlabel.json | 12 ------------ ...on => sub-perform02_T1w_label-discs_dlabel.json} | 0 ... => sub-perform02_T1w_label-discs_dlabel.nii.gz} | 0 ...rform02_T2star_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...rm02_T2star_label-discs_desc-warp_dlabel.nii.gz} | 0 ...on => sub-perform02_T2w_label-discs_dlabel.json} | 0 ... => sub-perform02_T2w_label-discs_dlabel.nii.gz} | 0 ...ip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...p-2_mt-off_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ..._mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...perform02_space-other_T2star_label-SC_seg.nii.gz | 2 +- ...e-other_T2star_label-discs_desc-warp_dlabel.json | 12 ------------ ...ub-perform02_space-other_T2w_label-CSF_seg.json} | 0 ...-perform02_space-other_T2w_label-CSF_seg.nii.gz} | 0 ...b-perform02_space-other_T2w_label-canal_seg.json | 11 +++++++++++ ...perform02_space-other_T2w_label-canal_seg.nii.gz | 1 + ...on => sub-perform03_T1w_label-discs_dlabel.json} | 0 ... => sub-perform03_T1w_label-discs_dlabel.nii.gz} | 0 ...rform03_T2star_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...rm03_T2star_label-discs_desc-warp_dlabel.nii.gz} | 0 ...on => sub-perform03_T2w_label-discs_dlabel.json} | 0 ... => sub-perform03_T2w_label-discs_dlabel.nii.gz} | 0 ...ip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...p-2_mt-off_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ..._mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...perform03_space-other_T2star_label-SC_seg.nii.gz | 2 +- ...e-other_T2star_label-discs_desc-warp_dlabel.json | 12 ------------ ...on => sub-perform04_T1w_label-discs_dlabel.json} | 0 ... => sub-perform04_T1w_label-discs_dlabel.nii.gz} | 0 ...rform04_T2star_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...rm04_T2star_label-discs_desc-warp_dlabel.nii.gz} | 0 ...on => sub-perform04_T2w_label-discs_dlabel.json} | 0 ... => sub-perform04_T2w_label-discs_dlabel.nii.gz} | 0 ...ip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...p-2_mt-off_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ..._mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...perform04_space-other_T2star_label-SC_seg.nii.gz | 2 +- ...e-other_T2star_label-discs_desc-warp_dlabel.json | 12 ------------ ...on => sub-perform05_T1w_label-discs_dlabel.json} | 0 ... => sub-perform05_T1w_label-discs_dlabel.nii.gz} | 0 ...rform05_T2star_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...rm05_T2star_label-discs_desc-warp_dlabel.nii.gz} | 0 ...on => sub-perform05_T2w_label-discs_dlabel.json} | 0 ... => sub-perform05_T2w_label-discs_dlabel.nii.gz} | 0 ...ip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...p-2_mt-off_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ..._mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...perform05_space-other_T2star_label-SC_seg.nii.gz | 2 +- ...e-other_T2star_label-discs_desc-warp_dlabel.json | 12 ------------ ...on => sub-perform06_T1w_label-discs_dlabel.json} | 0 ... => sub-perform06_T1w_label-discs_dlabel.nii.gz} | 0 ...rform06_T2star_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...rm06_T2star_label-discs_desc-warp_dlabel.nii.gz} | 0 ...on => sub-perform06_T2w_label-discs_dlabel.json} | 0 ... => sub-perform06_T2w_label-discs_dlabel.nii.gz} | 0 ...ip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...p-2_mt-off_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ..._mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...-other_T1w_label-vertebrae_desc-C2C5_dlabel.json | 11 +++++++++++ ...her_T1w_label-vertebrae_desc-C2C5_dlabel.nii.gz} | 0 ...perform06_space-other_T2star_label-SC_seg.nii.gz | 2 +- ...e-other_T2star_label-discs_desc-warp_dlabel.json | 12 ------------ ...=> sub-queensland01_T1w_label-discs_dlabel.json} | 0 ... sub-queensland01_T1w_label-discs_dlabel.nii.gz} | 0 ...sland01_T2star_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...nd01_T2star_label-discs_desc-warp_dlabel.nii.gz} | 0 ...=> sub-queensland01_T2w_label-discs_dlabel.json} | 0 ... sub-queensland01_T2w_label-discs_dlabel.nii.gz} | 0 ...ip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...p-2_mt-off_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ..._mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...ensland01_space-other_T2star_label-SC_seg.nii.gz | 2 +- ...e-other_T2star_label-discs_desc-warp_dlabel.json | 12 ------------ ...=> sub-queensland02_T1w_label-discs_dlabel.json} | 0 ... sub-queensland02_T1w_label-discs_dlabel.nii.gz} | 0 ...sland02_T2star_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...nd02_T2star_label-discs_desc-warp_dlabel.nii.gz} | 0 ...=> sub-queensland02_T2w_label-discs_dlabel.json} | 0 ... sub-queensland02_T2w_label-discs_dlabel.nii.gz} | 0 ...ip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...p-2_mt-off_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ..._mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...ensland02_space-other_T2star_label-SC_seg.nii.gz | 2 +- ...e-other_T2star_label-discs_desc-warp_dlabel.json | 12 ------------ ...=> sub-queensland03_T1w_label-discs_dlabel.json} | 0 ... sub-queensland03_T1w_label-discs_dlabel.nii.gz} | 0 ...sland03_T2star_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...nd03_T2star_label-discs_desc-warp_dlabel.nii.gz} | 0 ...=> sub-queensland03_T2w_label-discs_dlabel.json} | 0 ... sub-queensland03_T2w_label-discs_dlabel.nii.gz} | 0 ...ip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...p-2_mt-off_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ..._mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...ensland03_space-other_T2star_label-SC_seg.nii.gz | 2 +- ...e-other_T2star_label-discs_desc-warp_dlabel.json | 12 ------------ ...=> sub-queensland04_T1w_label-discs_dlabel.json} | 0 ... sub-queensland04_T1w_label-discs_dlabel.nii.gz} | 0 ...sland04_T2star_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...nd04_T2star_label-discs_desc-warp_dlabel.nii.gz} | 0 ...=> sub-queensland04_T2w_label-discs_dlabel.json} | 0 ... sub-queensland04_T2w_label-discs_dlabel.nii.gz} | 0 ...ip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...p-2_mt-off_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ..._mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...ensland04_space-other_T2star_label-SC_seg.nii.gz | 2 +- ...e-other_T2star_label-discs_desc-warp_dlabel.json | 12 ------------ ...=> sub-queensland05_T1w_label-discs_dlabel.json} | 0 ... sub-queensland05_T1w_label-discs_dlabel.nii.gz} | 0 ...sland05_T2star_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...nd05_T2star_label-discs_desc-warp_dlabel.nii.gz} | 0 ...=> sub-queensland05_T2w_label-discs_dlabel.json} | 0 ... sub-queensland05_T2w_label-discs_dlabel.nii.gz} | 0 ...ip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...p-2_mt-off_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ..._mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...ensland05_space-other_T2star_label-SC_seg.nii.gz | 2 +- ...e-other_T2star_label-discs_desc-warp_dlabel.json | 12 ------------ ...=> sub-queensland06_T1w_label-discs_dlabel.json} | 0 ... sub-queensland06_T1w_label-discs_dlabel.nii.gz} | 0 ...sland06_T2star_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...nd06_T2star_label-discs_desc-warp_dlabel.nii.gz} | 0 ...=> sub-queensland06_T2w_label-discs_dlabel.json} | 0 ... sub-queensland06_T2w_label-discs_dlabel.nii.gz} | 0 ...ip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...p-2_mt-off_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ..._mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...ensland06_space-other_T2star_label-SC_seg.nii.gz | 2 +- ...e-other_T2star_label-discs_desc-warp_dlabel.json | 12 ------------ ...=> sub-sherbrooke01_T1w_label-discs_dlabel.json} | 0 ... sub-sherbrooke01_T1w_label-discs_dlabel.nii.gz} | 0 ...rooke01_T2star_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...ke01_T2star_label-discs_desc-warp_dlabel.nii.gz} | 0 ...=> sub-sherbrooke01_T2w_label-discs_dlabel.json} | 0 ... sub-sherbrooke01_T2w_label-discs_dlabel.nii.gz} | 0 ...ip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...p-2_mt-off_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ..._mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...rooke01_space-other_T2star_gmlabel-SC_seg.nii.gz | 2 +- ...rbrooke01_space-other_T2star_label-SC_seg.nii.gz | 2 +- ...e-other_T2star_label-discs_desc-warp_dlabel.json | 12 ------------ ...=> sub-sherbrooke02_T1w_label-discs_dlabel.json} | 0 ... sub-sherbrooke02_T1w_label-discs_dlabel.nii.gz} | 0 ...rooke02_T2star_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...ke02_T2star_label-discs_desc-warp_dlabel.nii.gz} | 0 ...=> sub-sherbrooke02_T2w_label-discs_dlabel.json} | 0 ... sub-sherbrooke02_T2w_label-discs_dlabel.nii.gz} | 0 ...ip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...p-2_mt-off_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ..._mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...rbrooke02_space-other_T2star_label-SC_seg.nii.gz | 2 +- ...e-other_T2star_label-discs_desc-warp_dlabel.json | 12 ------------ ...=> sub-sherbrooke03_T1w_label-discs_dlabel.json} | 0 ... sub-sherbrooke03_T1w_label-discs_dlabel.nii.gz} | 0 ...rooke03_T2star_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...ke03_T2star_label-discs_desc-warp_dlabel.nii.gz} | 0 ...=> sub-sherbrooke03_T2w_label-discs_dlabel.json} | 0 ... sub-sherbrooke03_T2w_label-discs_dlabel.nii.gz} | 0 ...ip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...p-2_mt-off_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ..._mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...rooke03_space-other_T2star_gmlabel-SC_seg.nii.gz | 2 +- ...rbrooke03_space-other_T2star_label-SC_seg.nii.gz | 2 +- ...e-other_T2star_label-discs_desc-warp_dlabel.json | 12 ------------ ...=> sub-sherbrooke04_T1w_label-discs_dlabel.json} | 0 ... sub-sherbrooke04_T1w_label-discs_dlabel.nii.gz} | 0 ...rooke04_T2star_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...ke04_T2star_label-discs_desc-warp_dlabel.nii.gz} | 0 ...=> sub-sherbrooke04_T2w_label-discs_dlabel.json} | 0 ... sub-sherbrooke04_T2w_label-discs_dlabel.nii.gz} | 0 ...ip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...p-2_mt-off_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ..._mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...rbrooke04_space-other_T2star_label-SC_seg.nii.gz | 2 +- ...e-other_T2star_label-discs_desc-warp_dlabel.json | 12 ------------ ...=> sub-sherbrooke05_T1w_label-discs_dlabel.json} | 0 ... sub-sherbrooke05_T1w_label-discs_dlabel.nii.gz} | 0 ...rooke05_T2star_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...ke05_T2star_label-discs_desc-warp_dlabel.nii.gz} | 0 ...=> sub-sherbrooke05_T2w_label-discs_dlabel.json} | 0 ... sub-sherbrooke05_T2w_label-discs_dlabel.nii.gz} | 0 ...ip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...p-2_mt-off_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ..._mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...rbrooke05_space-other_T2star_label-SC_seg.nii.gz | 2 +- ...e-other_T2star_label-discs_desc-warp_dlabel.json | 12 ------------ ...=> sub-sherbrooke06_T1w_label-discs_dlabel.json} | 0 ... sub-sherbrooke06_T1w_label-discs_dlabel.nii.gz} | 0 ...rooke06_T2star_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...ke06_T2star_label-discs_desc-warp_dlabel.nii.gz} | 0 ...=> sub-sherbrooke06_T2w_label-discs_dlabel.json} | 0 ... sub-sherbrooke06_T2w_label-discs_dlabel.nii.gz} | 0 ...ip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...p-2_mt-off_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ..._mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...rbrooke06_space-other_T2star_label-SC_seg.nii.gz | 2 +- ...e-other_T2star_label-discs_desc-warp_dlabel.json | 12 ------------ ...=> sub-sherbrooke07_T1w_label-discs_dlabel.json} | 0 ... sub-sherbrooke07_T1w_label-discs_dlabel.nii.gz} | 0 ...rooke07_T2star_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...ke07_T2star_label-discs_desc-warp_dlabel.nii.gz} | 0 ...=> sub-sherbrooke07_T2w_label-discs_dlabel.json} | 0 ... sub-sherbrooke07_T2w_label-discs_dlabel.nii.gz} | 0 ...ip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...p-2_mt-off_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ..._mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...rbrooke07_space-other_T2star_label-SC_seg.nii.gz | 2 +- ...e-other_T2star_label-discs_desc-warp_dlabel.json | 12 ------------ ...n => sub-stanford01_T1w_label-discs_dlabel.json} | 0 ...=> sub-stanford01_T1w_label-discs_dlabel.nii.gz} | 0 ...nford01_T2star_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...rd01_T2star_label-discs_desc-warp_dlabel.nii.gz} | 0 ...n => sub-stanford01_T2w_label-discs_dlabel.json} | 0 ...=> sub-stanford01_T2w_label-discs_dlabel.nii.gz} | 0 ...ip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...p-2_mt-off_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ..._mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...tanford01_space-other_T2star_label-SC_seg.nii.gz | 2 +- ...e-other_T2star_label-discs_desc-warp_dlabel.json | 12 ------------ ...n => sub-stanford02_T1w_label-discs_dlabel.json} | 0 ...=> sub-stanford02_T1w_label-discs_dlabel.nii.gz} | 0 ...nford02_T2star_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...rd02_T2star_label-discs_desc-warp_dlabel.nii.gz} | 0 ...n => sub-stanford02_T2w_label-discs_dlabel.json} | 0 ...=> sub-stanford02_T2w_label-discs_dlabel.nii.gz} | 0 ...ip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...p-2_mt-off_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ..._mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...tanford02_space-other_T2star_label-SC_seg.nii.gz | 2 +- ...e-other_T2star_label-discs_desc-warp_dlabel.json | 12 ------------ ...n => sub-stanford03_T1w_label-discs_dlabel.json} | 0 ...=> sub-stanford03_T1w_label-discs_dlabel.nii.gz} | 0 ...nford03_T2star_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...rd03_T2star_label-discs_desc-warp_dlabel.nii.gz} | 0 ...n => sub-stanford03_T2w_label-discs_dlabel.json} | 0 ...=> sub-stanford03_T2w_label-discs_dlabel.nii.gz} | 0 ...ip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...p-2_mt-off_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ..._mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...-other_T1w_label-vertebrae_desc-C2C5_dlabel.json | 11 +++++++++++ ...her_T1w_label-vertebrae_desc-C2C5_dlabel.nii.gz} | 0 ...tanford03_space-other_T2star_label-SC_seg.nii.gz | 2 +- ...e-other_T2star_label-discs_desc-warp_dlabel.json | 12 ------------ ...n => sub-stanford04_T1w_label-discs_dlabel.json} | 0 ...=> sub-stanford04_T1w_label-discs_dlabel.nii.gz} | 0 ...nford04_T2star_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...rd04_T2star_label-discs_desc-warp_dlabel.nii.gz} | 0 ...n => sub-stanford04_T2w_label-discs_dlabel.json} | 0 ...=> sub-stanford04_T2w_label-discs_dlabel.nii.gz} | 0 ...ip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...p-2_mt-off_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ..._mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...tanford04_space-other_T2star_label-SC_seg.nii.gz | 2 +- ...e-other_T2star_label-discs_desc-warp_dlabel.json | 12 ------------ ...n => sub-stanford05_T1w_label-discs_dlabel.json} | 0 ...=> sub-stanford05_T1w_label-discs_dlabel.nii.gz} | 0 ...nford05_T2star_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...rd05_T2star_label-discs_desc-warp_dlabel.nii.gz} | 0 ...n => sub-stanford05_T2w_label-discs_dlabel.json} | 0 ...=> sub-stanford05_T2w_label-discs_dlabel.nii.gz} | 0 ...ip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...p-2_mt-off_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ..._mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...tanford05_space-other_T2star_label-SC_seg.nii.gz | 2 +- ...e-other_T2star_label-discs_desc-warp_dlabel.json | 12 ------------ ...n => sub-stanford06_T1w_label-discs_dlabel.json} | 0 ...=> sub-stanford06_T1w_label-discs_dlabel.nii.gz} | 0 ...nford06_T2star_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...rd06_T2star_label-discs_desc-warp_dlabel.nii.gz} | 0 ...n => sub-stanford06_T2w_label-discs_dlabel.json} | 0 ...=> sub-stanford06_T2w_label-discs_dlabel.nii.gz} | 0 ...ip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...p-2_mt-off_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ..._mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...-other_T1w_label-vertebrae_desc-C2C5_dlabel.json | 11 +++++++++++ ...her_T1w_label-vertebrae_desc-C2C5_dlabel.nii.gz} | 0 ...nford06_space-other_T2star_gmlabel-SC_seg.nii.gz | 2 +- ...tanford06_space-other_T2star_label-SC_seg.nii.gz | 2 +- ...e-other_T2star_label-discs_desc-warp_dlabel.json | 12 ------------ ...=> sub-strasbourg01_T1w_label-discs_dlabel.json} | 0 ... sub-strasbourg01_T1w_label-discs_dlabel.nii.gz} | 0 ...bourg01_T2star_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...rg01_T2star_label-discs_desc-warp_dlabel.nii.gz} | 0 ...=> sub-strasbourg01_T2w_label-discs_dlabel.json} | 0 ... sub-strasbourg01_T2w_label-discs_dlabel.nii.gz} | 0 ...ip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...p-2_mt-off_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ..._mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...asbourg01_space-other_T2star_label-SC_seg.nii.gz | 2 +- ...e-other_T2star_label-discs_desc-warp_dlabel.json | 12 ------------ ...=> sub-strasbourg02_T1w_label-discs_dlabel.json} | 0 ... sub-strasbourg02_T1w_label-discs_dlabel.nii.gz} | 0 ...bourg02_T2star_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...rg02_T2star_label-discs_desc-warp_dlabel.nii.gz} | 0 ...=> sub-strasbourg02_T2w_label-discs_dlabel.json} | 0 ... sub-strasbourg02_T2w_label-discs_dlabel.nii.gz} | 0 ...ip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...p-2_mt-off_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ..._mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...asbourg02_space-other_T2star_label-SC_seg.nii.gz | 2 +- ...e-other_T2star_label-discs_desc-warp_dlabel.json | 12 ------------ ...=> sub-strasbourg03_T1w_label-discs_dlabel.json} | 0 ... sub-strasbourg03_T1w_label-discs_dlabel.nii.gz} | 0 ...bourg03_T2star_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...rg03_T2star_label-discs_desc-warp_dlabel.nii.gz} | 0 ...=> sub-strasbourg03_T2w_label-discs_dlabel.json} | 0 ... sub-strasbourg03_T2w_label-discs_dlabel.nii.gz} | 0 ...ip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...p-2_mt-off_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ..._mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...asbourg03_space-other_T2star_label-SC_seg.nii.gz | 2 +- ...e-other_T2star_label-discs_desc-warp_dlabel.json | 12 ------------ ...=> sub-strasbourg04_T1w_label-discs_dlabel.json} | 0 ... sub-strasbourg04_T1w_label-discs_dlabel.nii.gz} | 0 ...bourg04_T2star_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...rg04_T2star_label-discs_desc-warp_dlabel.nii.gz} | 0 ...=> sub-strasbourg04_T2w_label-discs_dlabel.json} | 0 ... sub-strasbourg04_T2w_label-discs_dlabel.nii.gz} | 0 ...ip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...p-2_mt-off_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ..._mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...asbourg04_space-other_T2star_label-SC_seg.nii.gz | 2 +- ...e-other_T2star_label-discs_desc-warp_dlabel.json | 12 ------------ ...=> sub-strasbourg05_T1w_label-discs_dlabel.json} | 0 ... sub-strasbourg05_T1w_label-discs_dlabel.nii.gz} | 0 ...bourg05_T2star_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...rg05_T2star_label-discs_desc-warp_dlabel.nii.gz} | 0 ...=> sub-strasbourg05_T2w_label-discs_dlabel.json} | 0 ... sub-strasbourg05_T2w_label-discs_dlabel.nii.gz} | 0 ...ip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...p-2_mt-off_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ..._mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...asbourg05_space-other_T2star_label-SC_seg.nii.gz | 2 +- ...e-other_T2star_label-discs_desc-warp_dlabel.json | 12 ------------ ...=> sub-strasbourg06_T1w_label-discs_dlabel.json} | 0 ... sub-strasbourg06_T1w_label-discs_dlabel.nii.gz} | 0 ...bourg06_T2star_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...rg06_T2star_label-discs_desc-warp_dlabel.nii.gz} | 0 ...=> sub-strasbourg06_T2w_label-discs_dlabel.json} | 0 ... sub-strasbourg06_T2w_label-discs_dlabel.nii.gz} | 0 ...ip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...p-2_mt-off_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ..._mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...asbourg06_space-other_T2star_label-SC_seg.nii.gz | 2 +- ...e-other_T2star_label-discs_desc-warp_dlabel.json | 12 ------------ ...on => sub-tehranS01_T1w_label-discs_dlabel.json} | 0 ... => sub-tehranS01_T1w_label-discs_dlabel.nii.gz} | 0 ...hranS01_T2star_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...nS01_T2star_label-discs_desc-warp_dlabel.nii.gz} | 0 ...on => sub-tehranS01_T2w_label-discs_dlabel.json} | 0 ... => sub-tehranS01_T2w_label-discs_dlabel.nii.gz} | 0 ...ip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...p-2_mt-off_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ..._mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...tehranS01_space-other_T2star_label-SC_seg.nii.gz | 2 +- ...e-other_T2star_label-discs_desc-warp_dlabel.json | 12 ------------ ...on => sub-tehranS02_T1w_label-discs_dlabel.json} | 0 ... => sub-tehranS02_T1w_label-discs_dlabel.nii.gz} | 0 ...hranS02_T2star_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...nS02_T2star_label-discs_desc-warp_dlabel.nii.gz} | 0 ...on => sub-tehranS02_T2w_label-discs_dlabel.json} | 0 ... => sub-tehranS02_T2w_label-discs_dlabel.nii.gz} | 0 ...ip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...p-2_mt-off_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ..._mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...-other_T1w_label-vertebrae_desc-C2C5_dlabel.json | 11 +++++++++++ ...her_T1w_label-vertebrae_desc-C2C5_dlabel.nii.gz} | 0 ...tehranS02_space-other_T2star_label-SC_seg.nii.gz | 2 +- ...e-other_T2star_label-discs_desc-warp_dlabel.json | 12 ------------ ...on => sub-tehranS03_T1w_label-discs_dlabel.json} | 0 ... => sub-tehranS03_T1w_label-discs_dlabel.nii.gz} | 0 ...hranS03_T2star_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...nS03_T2star_label-discs_desc-warp_dlabel.nii.gz} | 0 ...on => sub-tehranS03_T2w_label-discs_dlabel.json} | 0 ... => sub-tehranS03_T2w_label-discs_dlabel.nii.gz} | 0 ...ip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...p-2_mt-off_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ..._mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...-other_T1w_label-vertebrae_desc-C2C5_dlabel.json | 11 +++++++++++ ...her_T1w_label-vertebrae_desc-C2C5_dlabel.nii.gz} | 0 ...tehranS03_space-other_T2star_label-SC_seg.nii.gz | 2 +- ...e-other_T2star_label-discs_desc-warp_dlabel.json | 12 ------------ ...on => sub-tehranS04_T1w_label-discs_dlabel.json} | 0 ... => sub-tehranS04_T1w_label-discs_dlabel.nii.gz} | 0 ...hranS04_T2star_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...nS04_T2star_label-discs_desc-warp_dlabel.nii.gz} | 0 ...on => sub-tehranS04_T2w_label-discs_dlabel.json} | 0 ... => sub-tehranS04_T2w_label-discs_dlabel.nii.gz} | 0 ...ip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...p-2_mt-off_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ..._mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...tehranS04_space-other_T2star_label-SC_seg.nii.gz | 2 +- ...e-other_T2star_label-discs_desc-warp_dlabel.json | 12 ------------ ...on => sub-tehranS05_T1w_label-discs_dlabel.json} | 0 ... => sub-tehranS05_T1w_label-discs_dlabel.nii.gz} | 0 ...hranS05_T2star_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...nS05_T2star_label-discs_desc-warp_dlabel.nii.gz} | 0 ...on => sub-tehranS05_T2w_label-discs_dlabel.json} | 0 ... => sub-tehranS05_T2w_label-discs_dlabel.nii.gz} | 0 ...ip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...p-2_mt-off_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ..._mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...tehranS05_space-other_T2star_label-SC_seg.nii.gz | 2 +- ...e-other_T2star_label-discs_desc-warp_dlabel.json | 12 ------------ ...on => sub-tehranS06_T1w_label-discs_dlabel.json} | 0 ... => sub-tehranS06_T1w_label-discs_dlabel.nii.gz} | 0 ...hranS06_T2star_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...nS06_T2star_label-discs_desc-warp_dlabel.nii.gz} | 0 ...on => sub-tehranS06_T2w_label-discs_dlabel.json} | 0 ... => sub-tehranS06_T2w_label-discs_dlabel.nii.gz} | 0 ...ip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...p-2_mt-off_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ..._mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...tehranS06_space-other_T2star_label-SC_seg.nii.gz | 2 +- ...e-other_T2star_label-discs_desc-warp_dlabel.json | 12 ------------ ... => sub-tokyo750w01_T1w_label-discs_dlabel.json} | 0 ...> sub-tokyo750w01_T1w_label-discs_dlabel.nii.gz} | 0 ...o750w01_T2star_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...0w01_T2star_label-discs_desc-warp_dlabel.nii.gz} | 0 ... => sub-tokyo750w01_T2w_label-discs_dlabel.json} | 0 ...> sub-tokyo750w01_T2w_label-discs_dlabel.nii.gz} | 0 ...ip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...p-2_mt-off_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ..._mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...kyo750w01_space-other_T2star_label-SC_seg.nii.gz | 2 +- ...e-other_T2star_label-discs_desc-warp_dlabel.json | 12 ------------ ... => sub-tokyo750w02_T1w_label-discs_dlabel.json} | 0 ...> sub-tokyo750w02_T1w_label-discs_dlabel.nii.gz} | 0 ...o750w02_T2star_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...0w02_T2star_label-discs_desc-warp_dlabel.nii.gz} | 0 ... => sub-tokyo750w02_T2w_label-discs_dlabel.json} | 0 ...> sub-tokyo750w02_T2w_label-discs_dlabel.nii.gz} | 0 ...ip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...p-2_mt-off_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ..._mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...kyo750w02_space-other_T2star_label-SC_seg.nii.gz | 2 +- ...e-other_T2star_label-discs_desc-warp_dlabel.json | 12 ------------ ... => sub-tokyo750w03_T1w_label-discs_dlabel.json} | 0 ...> sub-tokyo750w03_T1w_label-discs_dlabel.nii.gz} | 0 ...o750w03_T2star_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...0w03_T2star_label-discs_desc-warp_dlabel.nii.gz} | 0 ... => sub-tokyo750w03_T2w_label-discs_dlabel.json} | 0 ...> sub-tokyo750w03_T2w_label-discs_dlabel.nii.gz} | 0 ...ip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...p-2_mt-off_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ..._mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...kyo750w03_space-other_T2star_label-SC_seg.nii.gz | 2 +- ...e-other_T2star_label-discs_desc-warp_dlabel.json | 12 ------------ ... => sub-tokyo750w04_T1w_label-discs_dlabel.json} | 0 ...> sub-tokyo750w04_T1w_label-discs_dlabel.nii.gz} | 0 ...o750w04_T2star_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...0w04_T2star_label-discs_desc-warp_dlabel.nii.gz} | 0 ... => sub-tokyo750w04_T2w_label-discs_dlabel.json} | 0 ...> sub-tokyo750w04_T2w_label-discs_dlabel.nii.gz} | 0 ...ip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...p-2_mt-off_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ..._mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...kyo750w04_space-other_T2star_label-SC_seg.nii.gz | 2 +- ...e-other_T2star_label-discs_desc-warp_dlabel.json | 12 ------------ ... => sub-tokyo750w05_T1w_label-discs_dlabel.json} | 0 ...> sub-tokyo750w05_T1w_label-discs_dlabel.nii.gz} | 0 ...o750w05_T2star_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...0w05_T2star_label-discs_desc-warp_dlabel.nii.gz} | 0 ... => sub-tokyo750w05_T2w_label-discs_dlabel.json} | 0 ...> sub-tokyo750w05_T2w_label-discs_dlabel.nii.gz} | 0 ...ip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...p-2_mt-off_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ..._mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...o750w05_space-other_T2star_gmlabel-SC_seg.nii.gz | 2 +- ...kyo750w05_space-other_T2star_label-SC_seg.nii.gz | 2 +- ...e-other_T2star_label-discs_desc-warp_dlabel.json | 12 ------------ ... => sub-tokyo750w06_T1w_label-discs_dlabel.json} | 0 ...> sub-tokyo750w06_T1w_label-discs_dlabel.nii.gz} | 0 ...o750w06_T2star_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...0w06_T2star_label-discs_desc-warp_dlabel.nii.gz} | 0 ... => sub-tokyo750w06_T2w_label-discs_dlabel.json} | 0 ...> sub-tokyo750w06_T2w_label-discs_dlabel.nii.gz} | 0 ...ip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...p-2_mt-off_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ..._mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...o750w06_space-other_T2star_gmlabel-SC_seg.nii.gz | 2 +- ...kyo750w06_space-other_T2star_label-SC_seg.nii.gz | 2 +- ...e-other_T2star_label-discs_desc-warp_dlabel.json | 12 ------------ ... => sub-tokyo750w07_T1w_label-discs_dlabel.json} | 0 ...> sub-tokyo750w07_T1w_label-discs_dlabel.nii.gz} | 0 ...o750w07_T2star_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...0w07_T2star_label-discs_desc-warp_dlabel.nii.gz} | 0 ... => sub-tokyo750w07_T2w_label-discs_dlabel.json} | 0 ...> sub-tokyo750w07_T2w_label-discs_dlabel.nii.gz} | 0 ...ip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...p-2_mt-off_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ..._mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...kyo750w07_space-other_T2star_label-SC_seg.nii.gz | 2 +- ...e-other_T2star_label-discs_desc-warp_dlabel.json | 12 ------------ ... sub-tokyoIngenia01_T1w_label-discs_dlabel.json} | 0 ...ub-tokyoIngenia01_T1w_label-discs_dlabel.nii.gz} | 0 ...genia01_T2star_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...ia01_T2star_label-discs_desc-warp_dlabel.nii.gz} | 0 ... sub-tokyoIngenia01_T2w_label-discs_dlabel.json} | 0 ...ub-tokyoIngenia01_T2w_label-discs_dlabel.nii.gz} | 0 ...ip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...p-2_mt-off_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ..._mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...genia01_space-other_T2star_gmlabel-SC_seg.nii.gz | 2 +- ...Ingenia01_space-other_T2star_label-SC_seg.nii.gz | 2 +- ...e-other_T2star_label-discs_desc-warp_dlabel.json | 12 ------------ ... sub-tokyoIngenia02_T1w_label-discs_dlabel.json} | 0 ...ub-tokyoIngenia02_T1w_label-discs_dlabel.nii.gz} | 0 ...genia02_T2star_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...ia02_T2star_label-discs_desc-warp_dlabel.nii.gz} | 0 ... sub-tokyoIngenia02_T2w_label-discs_dlabel.json} | 0 ...ub-tokyoIngenia02_T2w_label-discs_dlabel.nii.gz} | 0 ...ip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...p-2_mt-off_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ..._mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...genia02_space-other_T2star_gmlabel-SC_seg.nii.gz | 2 +- ...Ingenia02_space-other_T2star_label-SC_seg.nii.gz | 2 +- ...e-other_T2star_label-discs_desc-warp_dlabel.json | 12 ------------ ... sub-tokyoIngenia03_T1w_label-discs_dlabel.json} | 0 ...ub-tokyoIngenia03_T1w_label-discs_dlabel.nii.gz} | 0 ...genia03_T2star_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...ia03_T2star_label-discs_desc-warp_dlabel.nii.gz} | 0 ... sub-tokyoIngenia03_T2w_label-discs_dlabel.json} | 0 ...ub-tokyoIngenia03_T2w_label-discs_dlabel.nii.gz} | 0 ...ip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...p-2_mt-off_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ..._mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...-other_T1w_label-vertebrae_desc-C2C5_dlabel.json | 11 +++++++++++ ...her_T1w_label-vertebrae_desc-C2C5_dlabel.nii.gz} | 0 ...genia03_space-other_T2star_gmlabel-SC_seg.nii.gz | 2 +- ...Ingenia03_space-other_T2star_label-SC_seg.nii.gz | 2 +- ...e-other_T2star_label-discs_desc-warp_dlabel.json | 12 ------------ ... sub-tokyoIngenia04_T1w_label-discs_dlabel.json} | 0 ...ub-tokyoIngenia04_T1w_label-discs_dlabel.nii.gz} | 0 ...genia04_T2star_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...ia04_T2star_label-discs_desc-warp_dlabel.nii.gz} | 0 ... sub-tokyoIngenia04_T2w_label-discs_dlabel.json} | 0 ...ub-tokyoIngenia04_T2w_label-discs_dlabel.nii.gz} | 0 ...ip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...p-2_mt-off_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ..._mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...genia04_space-other_T2star_gmlabel-SC_seg.nii.gz | 2 +- ...Ingenia04_space-other_T2star_label-SC_seg.nii.gz | 2 +- ...e-other_T2star_label-discs_desc-warp_dlabel.json | 12 ------------ ... sub-tokyoIngenia05_T1w_label-discs_dlabel.json} | 0 ...ub-tokyoIngenia05_T1w_label-discs_dlabel.nii.gz} | 0 ...genia05_T2star_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...ia05_T2star_label-discs_desc-warp_dlabel.nii.gz} | 0 ... sub-tokyoIngenia05_T2w_label-discs_dlabel.json} | 0 ...ub-tokyoIngenia05_T2w_label-discs_dlabel.nii.gz} | 0 ...ip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...p-2_mt-off_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ..._mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...Ingenia05_space-other_T2star_label-SC_seg.nii.gz | 2 +- ...e-other_T2star_label-discs_desc-warp_dlabel.json | 12 ------------ ...kyoIngenia05_space-other_T2w_label-CSF_seg.json} | 0 ...oIngenia05_space-other_T2w_label-CSF_seg.nii.gz} | 0 ...yoIngenia05_space-other_T2w_label-canal_seg.json | 11 +++++++++++ ...Ingenia05_space-other_T2w_label-canal_seg.nii.gz | 1 + ... sub-tokyoIngenia06_T1w_label-discs_dlabel.json} | 0 ...ub-tokyoIngenia06_T1w_label-discs_dlabel.nii.gz} | 0 ...genia06_T2star_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...ia06_T2star_label-discs_desc-warp_dlabel.nii.gz} | 0 ... sub-tokyoIngenia06_T2w_label-discs_dlabel.json} | 0 ...ub-tokyoIngenia06_T2w_label-discs_dlabel.nii.gz} | 0 ...ip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...p-2_mt-off_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ..._mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...Ingenia06_space-other_T2star_label-SC_seg.nii.gz | 2 +- ...e-other_T2star_label-discs_desc-warp_dlabel.json | 12 ------------ ...kyoIngenia06_space-other_T2w_label-CSF_seg.json} | 0 ...oIngenia06_space-other_T2w_label-CSF_seg.nii.gz} | 0 ...yoIngenia06_space-other_T2w_label-canal_seg.json | 11 +++++++++++ ...Ingenia06_space-other_T2w_label-canal_seg.nii.gz | 1 + ... sub-tokyoIngenia07_T1w_label-discs_dlabel.json} | 0 ...ub-tokyoIngenia07_T1w_label-discs_dlabel.nii.gz} | 0 ...genia07_T2star_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...ia07_T2star_label-discs_desc-warp_dlabel.nii.gz} | 0 ... sub-tokyoIngenia07_T2w_label-discs_dlabel.json} | 0 ...ub-tokyoIngenia07_T2w_label-discs_dlabel.nii.gz} | 0 ...ip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...p-2_mt-off_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ..._mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...Ingenia07_space-other_T2star_label-SC_seg.nii.gz | 2 +- ...e-other_T2star_label-discs_desc-warp_dlabel.json | 12 ------------ ...=> sub-tokyoSkyra01_T1w_label-discs_dlabel.json} | 0 ... sub-tokyoSkyra01_T1w_label-discs_dlabel.nii.gz} | 0 ...Skyra01_T2star_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...ra01_T2star_label-discs_desc-warp_dlabel.nii.gz} | 0 ...=> sub-tokyoSkyra01_T2w_label-discs_dlabel.json} | 0 ... sub-tokyoSkyra01_T2w_label-discs_dlabel.nii.gz} | 0 ...ip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...p-2_mt-off_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ..._mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...yoSkyra01_space-other_T2star_label-SC_seg.nii.gz | 2 +- ...e-other_T2star_label-discs_desc-warp_dlabel.json | 12 ------------ ...=> sub-tokyoSkyra02_T1w_label-discs_dlabel.json} | 0 ... sub-tokyoSkyra02_T1w_label-discs_dlabel.nii.gz} | 0 ...Skyra02_T2star_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...ra02_T2star_label-discs_desc-warp_dlabel.nii.gz} | 0 ...=> sub-tokyoSkyra02_T2w_label-discs_dlabel.json} | 0 ... sub-tokyoSkyra02_T2w_label-discs_dlabel.nii.gz} | 0 ...ip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...p-2_mt-off_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ..._mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...yoSkyra02_space-other_T2star_label-SC_seg.nii.gz | 2 +- ...e-other_T2star_label-discs_desc-warp_dlabel.json | 12 ------------ ...=> sub-tokyoSkyra03_T1w_label-discs_dlabel.json} | 0 ... sub-tokyoSkyra03_T1w_label-discs_dlabel.nii.gz} | 0 ...Skyra03_T2star_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...ra03_T2star_label-discs_desc-warp_dlabel.nii.gz} | 0 ...=> sub-tokyoSkyra03_T2w_label-discs_dlabel.json} | 0 ... sub-tokyoSkyra03_T2w_label-discs_dlabel.nii.gz} | 0 ...ip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...p-2_mt-off_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ..._mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...-other_T1w_label-vertebrae_desc-C2C5_dlabel.json | 11 +++++++++++ ...her_T1w_label-vertebrae_desc-C2C5_dlabel.nii.gz} | 0 ...Skyra03_space-other_T2star_gmlabel-SC_seg.nii.gz | 2 +- ...yoSkyra03_space-other_T2star_label-SC_seg.nii.gz | 2 +- ...e-other_T2star_label-discs_desc-warp_dlabel.json | 12 ------------ ...=> sub-tokyoSkyra04_T1w_label-discs_dlabel.json} | 0 ... sub-tokyoSkyra04_T1w_label-discs_dlabel.nii.gz} | 0 ...Skyra04_T2star_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...ra04_T2star_label-discs_desc-warp_dlabel.nii.gz} | 0 ...=> sub-tokyoSkyra04_T2w_label-discs_dlabel.json} | 0 ... sub-tokyoSkyra04_T2w_label-discs_dlabel.nii.gz} | 0 ...ip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...p-2_mt-off_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ..._mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...Skyra04_space-other_T2star_gmlabel-SC_seg.nii.gz | 2 +- ...yoSkyra04_space-other_T2star_label-SC_seg.nii.gz | 2 +- ...e-other_T2star_label-discs_desc-warp_dlabel.json | 12 ------------ ...=> sub-tokyoSkyra05_T1w_label-discs_dlabel.json} | 0 ... sub-tokyoSkyra05_T1w_label-discs_dlabel.nii.gz} | 0 ...Skyra05_T2star_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...ra05_T2star_label-discs_desc-warp_dlabel.nii.gz} | 0 ...=> sub-tokyoSkyra05_T2w_label-discs_dlabel.json} | 0 ... sub-tokyoSkyra05_T2w_label-discs_dlabel.nii.gz} | 0 ...ip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...p-2_mt-off_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ..._mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...yoSkyra05_space-other_T2star_label-SC_seg.nii.gz | 2 +- ...e-other_T2star_label-discs_desc-warp_dlabel.json | 12 ------------ ...=> sub-tokyoSkyra06_T1w_label-discs_dlabel.json} | 0 ... sub-tokyoSkyra06_T1w_label-discs_dlabel.nii.gz} | 0 ...Skyra06_T2star_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...ra06_T2star_label-discs_desc-warp_dlabel.nii.gz} | 0 ...=> sub-tokyoSkyra06_T2w_label-discs_dlabel.json} | 0 ... sub-tokyoSkyra06_T2w_label-discs_dlabel.nii.gz} | 0 ...ip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...p-2_mt-off_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ..._mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...yoSkyra06_space-other_T2star_label-SC_seg.nii.gz | 2 +- ...e-other_T2star_label-discs_desc-warp_dlabel.json | 12 ------------ ...=> sub-tokyoSkyra07_T1w_label-discs_dlabel.json} | 0 ... sub-tokyoSkyra07_T1w_label-discs_dlabel.nii.gz} | 0 ...Skyra07_T2star_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...ra07_T2star_label-discs_desc-warp_dlabel.nii.gz} | 0 ...=> sub-tokyoSkyra07_T2w_label-discs_dlabel.json} | 0 ... sub-tokyoSkyra07_T2w_label-discs_dlabel.nii.gz} | 0 ...ip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...p-2_mt-off_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ..._mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...yoSkyra07_space-other_T2star_label-SC_seg.nii.gz | 2 +- ...e-other_T2star_label-discs_desc-warp_dlabel.json | 12 ------------ ...l.json => sub-ubc01_T1w_label-discs_dlabel.json} | 0 ...i.gz => sub-ubc01_T1w_label-discs_dlabel.nii.gz} | 0 ...l.json => sub-ubc01_T2w_label-discs_dlabel.json} | 0 ...i.gz => sub-ubc01_T2w_label-discs_dlabel.nii.gz} | 0 ...sub-ubc01_space-other_T2star_label-SC_seg.nii.gz | 2 +- ...l.json => sub-ubc02_T1w_label-discs_dlabel.json} | 0 ...i.gz => sub-ubc02_T1w_label-discs_dlabel.nii.gz} | 0 ...b-ubc02_T2star_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...bc02_T2star_label-discs_desc-warp_dlabel.nii.gz} | 0 ...l.json => sub-ubc02_T2w_label-discs_dlabel.json} | 0 ...i.gz => sub-ubc02_T2w_label-discs_dlabel.nii.gz} | 0 ...ip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...p-2_mt-off_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ..._mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...sub-ubc02_space-other_T2star_label-SC_seg.nii.gz | 2 +- ...e-other_T2star_label-discs_desc-warp_dlabel.json | 12 ------------ ...l.json => sub-ubc03_T1w_label-discs_dlabel.json} | 0 ...i.gz => sub-ubc03_T1w_label-discs_dlabel.nii.gz} | 0 ...b-ubc03_T2star_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...bc03_T2star_label-discs_desc-warp_dlabel.nii.gz} | 0 ...l.json => sub-ubc03_T2w_label-discs_dlabel.json} | 0 ...i.gz => sub-ubc03_T2w_label-discs_dlabel.nii.gz} | 0 ...ip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...p-2_mt-off_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ..._mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...sub-ubc03_space-other_T2star_label-SC_seg.nii.gz | 2 +- ...e-other_T2star_label-discs_desc-warp_dlabel.json | 12 ------------ ...l.json => sub-ubc04_T1w_label-discs_dlabel.json} | 0 ...i.gz => sub-ubc04_T1w_label-discs_dlabel.nii.gz} | 0 ...b-ubc04_T2star_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...bc04_T2star_label-discs_desc-warp_dlabel.nii.gz} | 0 ...l.json => sub-ubc04_T2w_label-discs_dlabel.json} | 0 ...i.gz => sub-ubc04_T2w_label-discs_dlabel.nii.gz} | 0 ...ip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...p-2_mt-off_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ..._mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...sub-ubc04_space-other_T2star_label-SC_seg.nii.gz | 2 +- ...e-other_T2star_label-discs_desc-warp_dlabel.json | 12 ------------ ...l.json => sub-ubc05_T1w_label-discs_dlabel.json} | 0 ...i.gz => sub-ubc05_T1w_label-discs_dlabel.nii.gz} | 0 ...b-ubc05_T2star_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...bc05_T2star_label-discs_desc-warp_dlabel.nii.gz} | 0 ...l.json => sub-ubc05_T2w_label-discs_dlabel.json} | 0 ...i.gz => sub-ubc05_T2w_label-discs_dlabel.nii.gz} | 0 ...ip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...p-2_mt-off_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ..._mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...sub-ubc05_space-other_T2star_label-SC_seg.nii.gz | 2 +- ...e-other_T2star_label-discs_desc-warp_dlabel.json | 12 ------------ ...l.json => sub-ubc06_T1w_label-discs_dlabel.json} | 0 ...i.gz => sub-ubc06_T1w_label-discs_dlabel.nii.gz} | 0 ...b-ubc06_T2star_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...bc06_T2star_label-discs_desc-warp_dlabel.nii.gz} | 0 ...l.json => sub-ubc06_T2w_label-discs_dlabel.json} | 0 ...i.gz => sub-ubc06_T2w_label-discs_dlabel.nii.gz} | 0 ...ip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...p-2_mt-off_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ..._mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...sub-ubc06_space-other_T2star_label-SC_seg.nii.gz | 2 +- ...e-other_T2star_label-discs_desc-warp_dlabel.json | 12 ------------ ...on => sub-ucdavis01_T1w_label-discs_dlabel.json} | 0 ... => sub-ucdavis01_T1w_label-discs_dlabel.nii.gz} | 0 ...on => sub-ucdavis01_T2w_label-discs_dlabel.json} | 0 ... => sub-ucdavis01_T2w_label-discs_dlabel.nii.gz} | 0 ...ucdavis01_space-other_T2star_label-SC_seg.nii.gz | 2 +- ...on => sub-ucdavis02_T1w_label-discs_dlabel.json} | 0 ... => sub-ucdavis02_T1w_label-discs_dlabel.nii.gz} | 0 ...on => sub-ucdavis02_T2w_label-discs_dlabel.json} | 0 ... => sub-ucdavis02_T2w_label-discs_dlabel.nii.gz} | 0 ...ucdavis02_space-other_T2star_label-SC_seg.nii.gz | 2 +- ...on => sub-ucdavis03_T1w_label-discs_dlabel.json} | 0 ... => sub-ucdavis03_T1w_label-discs_dlabel.nii.gz} | 0 ...on => sub-ucdavis03_T2w_label-discs_dlabel.json} | 0 ... => sub-ucdavis03_T2w_label-discs_dlabel.nii.gz} | 0 ...ucdavis03_space-other_T2star_label-SC_seg.nii.gz | 2 +- ...on => sub-ucdavis04_T1w_label-discs_dlabel.json} | 0 ... => sub-ucdavis04_T1w_label-discs_dlabel.nii.gz} | 0 ...on => sub-ucdavis04_T2w_label-discs_dlabel.json} | 0 ... => sub-ucdavis04_T2w_label-discs_dlabel.nii.gz} | 0 ...ucdavis04_space-other_T2star_label-SC_seg.nii.gz | 2 +- ...on => sub-ucdavis05_T1w_label-discs_dlabel.json} | 0 ... => sub-ucdavis05_T1w_label-discs_dlabel.nii.gz} | 0 ...on => sub-ucdavis05_T2w_label-discs_dlabel.json} | 0 ... => sub-ucdavis05_T2w_label-discs_dlabel.nii.gz} | 0 ...ucdavis05_space-other_T2star_label-SC_seg.nii.gz | 2 +- ...on => sub-ucdavis06_T1w_label-discs_dlabel.json} | 0 ... => sub-ucdavis06_T1w_label-discs_dlabel.nii.gz} | 0 ...on => sub-ucdavis06_T2w_label-discs_dlabel.json} | 0 ... => sub-ucdavis06_T2w_label-discs_dlabel.nii.gz} | 0 ...ucdavis06_space-other_T2star_label-SC_seg.nii.gz | 2 +- ...on => sub-ucdavis07_T1w_label-discs_dlabel.json} | 0 ... => sub-ucdavis07_T1w_label-discs_dlabel.nii.gz} | 0 ...on => sub-ucdavis07_T2w_label-discs_dlabel.json} | 0 ... => sub-ucdavis07_T2w_label-discs_dlabel.nii.gz} | 0 ...ucdavis07_space-other_T2star_label-SC_seg.nii.gz | 2 +- ...l.json => sub-ucl01_T1w_label-discs_dlabel.json} | 0 ...i.gz => sub-ucl01_T1w_label-discs_dlabel.nii.gz} | 0 ...b-ucl01_T2star_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...cl01_T2star_label-discs_desc-warp_dlabel.nii.gz} | 0 ...l.json => sub-ucl01_T2w_label-discs_dlabel.json} | 0 ...i.gz => sub-ucl01_T2w_label-discs_dlabel.nii.gz} | 0 ...ip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...p-2_mt-off_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ..._mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...sub-ucl01_space-other_T2star_label-SC_seg.nii.gz | 2 +- ...e-other_T2star_label-discs_desc-warp_dlabel.json | 12 ------------ ...l.json => sub-ucl02_T1w_label-discs_dlabel.json} | 0 ...i.gz => sub-ucl02_T1w_label-discs_dlabel.nii.gz} | 0 ...b-ucl02_T2star_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...cl02_T2star_label-discs_desc-warp_dlabel.nii.gz} | 0 ...l.json => sub-ucl02_T2w_label-discs_dlabel.json} | 0 ...i.gz => sub-ucl02_T2w_label-discs_dlabel.nii.gz} | 0 ...ip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...p-2_mt-off_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ..._mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...sub-ucl02_space-other_T2star_label-SC_seg.nii.gz | 2 +- ...e-other_T2star_label-discs_desc-warp_dlabel.json | 12 ------------ ...l.json => sub-ucl03_T1w_label-discs_dlabel.json} | 0 ...i.gz => sub-ucl03_T1w_label-discs_dlabel.nii.gz} | 0 ...b-ucl03_T2star_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...cl03_T2star_label-discs_desc-warp_dlabel.nii.gz} | 0 ...l.json => sub-ucl03_T2w_label-discs_dlabel.json} | 0 ...i.gz => sub-ucl03_T2w_label-discs_dlabel.nii.gz} | 0 ...ip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...p-2_mt-off_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ..._mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...sub-ucl03_space-other_T2star_label-SC_seg.nii.gz | 2 +- ...e-other_T2star_label-discs_desc-warp_dlabel.json | 12 ------------ ...l.json => sub-ucl04_T1w_label-discs_dlabel.json} | 0 ...i.gz => sub-ucl04_T1w_label-discs_dlabel.nii.gz} | 0 ...b-ucl04_T2star_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...cl04_T2star_label-discs_desc-warp_dlabel.nii.gz} | 0 ...l.json => sub-ucl04_T2w_label-discs_dlabel.json} | 0 ...i.gz => sub-ucl04_T2w_label-discs_dlabel.nii.gz} | 0 ...ip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...p-2_mt-off_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ..._mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...sub-ucl04_space-other_T2star_label-SC_seg.nii.gz | 2 +- ...e-other_T2star_label-discs_desc-warp_dlabel.json | 12 ------------ ...l.json => sub-ucl05_T1w_label-discs_dlabel.json} | 0 ...i.gz => sub-ucl05_T1w_label-discs_dlabel.nii.gz} | 0 ...b-ucl05_T2star_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...cl05_T2star_label-discs_desc-warp_dlabel.nii.gz} | 0 ...l.json => sub-ucl05_T2w_label-discs_dlabel.json} | 0 ...i.gz => sub-ucl05_T2w_label-discs_dlabel.nii.gz} | 0 ...ip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...p-2_mt-off_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ..._mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...sub-ucl05_space-other_T2star_label-SC_seg.nii.gz | 2 +- ...e-other_T2star_label-discs_desc-warp_dlabel.json | 12 ------------ ...l.json => sub-ucl06_T1w_label-discs_dlabel.json} | 0 ...i.gz => sub-ucl06_T1w_label-discs_dlabel.nii.gz} | 0 ...b-ucl06_T2star_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...cl06_T2star_label-discs_desc-warp_dlabel.nii.gz} | 0 ...l.json => sub-ucl06_T2w_label-discs_dlabel.json} | 0 ...i.gz => sub-ucl06_T2w_label-discs_dlabel.nii.gz} | 0 ...ip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...p-2_mt-off_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ..._mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...sub-ucl06_space-other_T2star_label-SC_seg.nii.gz | 2 +- ...e-other_T2star_label-discs_desc-warp_dlabel.json | 12 ------------ ...l.json => sub-unf01_T1w_label-discs_dlabel.json} | 0 ...i.gz => sub-unf01_T1w_label-discs_dlabel.nii.gz} | 0 ...b-unf01_T2star_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...nf01_T2star_label-discs_desc-warp_dlabel.nii.gz} | 0 ...l.json => sub-unf01_T2w_label-discs_dlabel.json} | 0 ...i.gz => sub-unf01_T2w_label-discs_dlabel.nii.gz} | 0 ...ip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...p-2_mt-off_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ..._mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...sub-unf01_space-other_T2star_label-SC_seg.nii.gz | 2 +- ...e-other_T2star_label-discs_desc-warp_dlabel.json | 12 ------------ ...l.json => sub-unf02_T1w_label-discs_dlabel.json} | 0 ...i.gz => sub-unf02_T1w_label-discs_dlabel.nii.gz} | 0 ...b-unf02_T2star_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...nf02_T2star_label-discs_desc-warp_dlabel.nii.gz} | 0 ...l.json => sub-unf02_T2w_label-discs_dlabel.json} | 0 ...i.gz => sub-unf02_T2w_label-discs_dlabel.nii.gz} | 0 ...ip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...p-2_mt-off_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ..._mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...sub-unf02_space-other_T2star_label-SC_seg.nii.gz | 2 +- ...e-other_T2star_label-discs_desc-warp_dlabel.json | 12 ------------ ...l.json => sub-unf03_T1w_label-discs_dlabel.json} | 0 ...i.gz => sub-unf03_T1w_label-discs_dlabel.nii.gz} | 0 ...b-unf03_T2star_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...nf03_T2star_label-discs_desc-warp_dlabel.nii.gz} | 0 ...l.json => sub-unf03_T2w_label-discs_dlabel.json} | 0 ...i.gz => sub-unf03_T2w_label-discs_dlabel.nii.gz} | 0 ...ip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...p-2_mt-off_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ..._mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...sub-unf03_space-other_T2star_label-SC_seg.nii.gz | 2 +- ...e-other_T2star_label-discs_desc-warp_dlabel.json | 12 ------------ ...l.json => sub-unf04_T1w_label-discs_dlabel.json} | 0 ...i.gz => sub-unf04_T1w_label-discs_dlabel.nii.gz} | 0 ...b-unf04_T2star_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...nf04_T2star_label-discs_desc-warp_dlabel.nii.gz} | 0 ...l.json => sub-unf04_T2w_label-discs_dlabel.json} | 0 ...i.gz => sub-unf04_T2w_label-discs_dlabel.nii.gz} | 0 ...ip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...p-2_mt-off_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ..._mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...sub-unf04_space-other_T2star_label-SC_seg.nii.gz | 2 +- ...e-other_T2star_label-discs_desc-warp_dlabel.json | 12 ------------ ...l.json => sub-unf05_T1w_label-discs_dlabel.json} | 0 ...i.gz => sub-unf05_T1w_label-discs_dlabel.nii.gz} | 0 ...b-unf05_T2star_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...nf05_T2star_label-discs_desc-warp_dlabel.nii.gz} | 0 ...l.json => sub-unf05_T2w_label-discs_dlabel.json} | 0 ...i.gz => sub-unf05_T2w_label-discs_dlabel.nii.gz} | 0 ...ip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...p-2_mt-off_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ..._mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...sub-unf05_space-other_T2star_label-SC_seg.nii.gz | 2 +- ...e-other_T2star_label-discs_desc-warp_dlabel.json | 12 ------------ ...l.json => sub-unf06_T1w_label-discs_dlabel.json} | 0 ...i.gz => sub-unf06_T1w_label-discs_dlabel.nii.gz} | 0 ...b-unf06_T2star_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...nf06_T2star_label-discs_desc-warp_dlabel.nii.gz} | 0 ...l.json => sub-unf06_T2w_label-discs_dlabel.json} | 0 ...i.gz => sub-unf06_T2w_label-discs_dlabel.nii.gz} | 0 ...ip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...p-2_mt-off_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ..._mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...sub-unf06_space-other_T2star_label-SC_seg.nii.gz | 2 +- ...e-other_T2star_label-discs_desc-warp_dlabel.json | 12 ------------ ...l.json => sub-unf07_T1w_label-discs_dlabel.json} | 0 ...i.gz => sub-unf07_T1w_label-discs_dlabel.nii.gz} | 0 ...b-unf07_T2star_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...nf07_T2star_label-discs_desc-warp_dlabel.nii.gz} | 0 ...l.json => sub-unf07_T2w_label-discs_dlabel.json} | 0 ...i.gz => sub-unf07_T2w_label-discs_dlabel.nii.gz} | 0 ...ip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...p-2_mt-off_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ..._mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...sub-unf07_space-other_T2star_label-SC_seg.nii.gz | 2 +- ...e-other_T2star_label-discs_desc-warp_dlabel.json | 12 ------------ ...=> sub-vallHebron01_T1w_label-discs_dlabel.json} | 0 ... sub-vallHebron01_T1w_label-discs_dlabel.nii.gz} | 0 ...ebron01_T2star_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...on01_T2star_label-discs_desc-warp_dlabel.nii.gz} | 0 ...=> sub-vallHebron01_T2w_label-discs_dlabel.json} | 0 ... sub-vallHebron01_T2w_label-discs_dlabel.nii.gz} | 0 ...ip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...p-2_mt-off_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ..._mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...lHebron01_space-other_T2star_label-SC_seg.nii.gz | 2 +- ...e-other_T2star_label-discs_desc-warp_dlabel.json | 12 ------------ ...=> sub-vallHebron02_T1w_label-discs_dlabel.json} | 0 ... sub-vallHebron02_T1w_label-discs_dlabel.nii.gz} | 0 ...ebron02_T2star_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...on02_T2star_label-discs_desc-warp_dlabel.nii.gz} | 0 ...=> sub-vallHebron02_T2w_label-discs_dlabel.json} | 0 ... sub-vallHebron02_T2w_label-discs_dlabel.nii.gz} | 0 ...ip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...p-2_mt-off_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ..._mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...lHebron02_space-other_T2star_label-SC_seg.nii.gz | 2 +- ...e-other_T2star_label-discs_desc-warp_dlabel.json | 12 ------------ ...=> sub-vallHebron03_T1w_label-discs_dlabel.json} | 0 ... sub-vallHebron03_T1w_label-discs_dlabel.nii.gz} | 0 ...ebron03_T2star_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...on03_T2star_label-discs_desc-warp_dlabel.nii.gz} | 0 ...=> sub-vallHebron03_T2w_label-discs_dlabel.json} | 0 ... sub-vallHebron03_T2w_label-discs_dlabel.nii.gz} | 0 ...ip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...p-2_mt-off_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ..._mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...-other_T1w_label-vertebrae_desc-C2C5_dlabel.json | 11 +++++++++++ ...her_T1w_label-vertebrae_desc-C2C5_dlabel.nii.gz} | 0 ...lHebron03_space-other_T2star_label-SC_seg.nii.gz | 2 +- ...e-other_T2star_label-discs_desc-warp_dlabel.json | 12 ------------ ...=> sub-vallHebron04_T1w_label-discs_dlabel.json} | 0 ... sub-vallHebron04_T1w_label-discs_dlabel.nii.gz} | 0 ...ebron04_T2star_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...on04_T2star_label-discs_desc-warp_dlabel.nii.gz} | 0 ...=> sub-vallHebron04_T2w_label-discs_dlabel.json} | 0 ... sub-vallHebron04_T2w_label-discs_dlabel.nii.gz} | 0 ...ip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...p-2_mt-off_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ..._mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...lHebron04_space-other_T2star_label-SC_seg.nii.gz | 2 +- ...e-other_T2star_label-discs_desc-warp_dlabel.json | 12 ------------ ...=> sub-vallHebron05_T1w_label-discs_dlabel.json} | 0 ... sub-vallHebron05_T1w_label-discs_dlabel.nii.gz} | 0 ...ebron05_T2star_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...on05_T2star_label-discs_desc-warp_dlabel.nii.gz} | 0 ...=> sub-vallHebron05_T2w_label-discs_dlabel.json} | 0 ... sub-vallHebron05_T2w_label-discs_dlabel.nii.gz} | 0 ...ip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...p-2_mt-off_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ..._mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...lHebron05_space-other_T2star_label-SC_seg.nii.gz | 2 +- ...e-other_T2star_label-discs_desc-warp_dlabel.json | 12 ------------ ...=> sub-vallHebron06_T1w_label-discs_dlabel.json} | 0 ... sub-vallHebron06_T1w_label-discs_dlabel.nii.gz} | 0 ...ebron06_T2star_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...on06_T2star_label-discs_desc-warp_dlabel.nii.gz} | 0 ...=> sub-vallHebron06_T2w_label-discs_dlabel.json} | 0 ... sub-vallHebron06_T2w_label-discs_dlabel.nii.gz} | 0 ...ip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...p-2_mt-off_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ..._mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...lHebron06_space-other_T2star_label-SC_seg.nii.gz | 2 +- ...e-other_T2star_label-discs_desc-warp_dlabel.json | 12 ------------ ...=> sub-vallHebron07_T1w_label-discs_dlabel.json} | 0 ... sub-vallHebron07_T1w_label-discs_dlabel.nii.gz} | 0 ...ebron07_T2star_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...on07_T2star_label-discs_desc-warp_dlabel.nii.gz} | 0 ...=> sub-vallHebron07_T2w_label-discs_dlabel.json} | 0 ... sub-vallHebron07_T2w_label-discs_dlabel.nii.gz} | 0 ...ip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...p-2_mt-off_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ..._mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...-other_T1w_label-vertebrae_desc-C2C5_dlabel.json | 11 +++++++++++ ...her_T1w_label-vertebrae_desc-C2C5_dlabel.nii.gz} | 0 ...lHebron07_space-other_T2star_label-SC_seg.nii.gz | 2 +- ...e-other_T2star_label-discs_desc-warp_dlabel.json | 12 ------------ ... sub-vuiisAchieva01_T1w_label-discs_dlabel.json} | 0 ...ub-vuiisAchieva01_T1w_label-discs_dlabel.nii.gz} | 0 ...hieva01_T2star_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...va01_T2star_label-discs_desc-warp_dlabel.nii.gz} | 0 ... sub-vuiisAchieva01_T2w_label-discs_dlabel.json} | 0 ...ub-vuiisAchieva01_T2w_label-discs_dlabel.nii.gz} | 0 ...ip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...p-2_mt-off_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ..._mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...hieva01_space-other_T2star_gmlabel-SC_seg.nii.gz | 2 +- ...Achieva01_space-other_T2star_label-SC_seg.nii.gz | 2 +- ...e-other_T2star_label-discs_desc-warp_dlabel.json | 12 ------------ ... sub-vuiisAchieva02_T1w_label-discs_dlabel.json} | 0 ...ub-vuiisAchieva02_T1w_label-discs_dlabel.nii.gz} | 0 ...hieva02_T2star_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...va02_T2star_label-discs_desc-warp_dlabel.nii.gz} | 0 ... sub-vuiisAchieva02_T2w_label-discs_dlabel.json} | 0 ...ub-vuiisAchieva02_T2w_label-discs_dlabel.nii.gz} | 0 ...ip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...p-2_mt-off_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ..._mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...Achieva02_space-other_T2star_label-SC_seg.nii.gz | 2 +- ...e-other_T2star_label-discs_desc-warp_dlabel.json | 12 ------------ ... sub-vuiisAchieva03_T1w_label-discs_dlabel.json} | 0 ...ub-vuiisAchieva03_T1w_label-discs_dlabel.nii.gz} | 0 ...hieva03_T2star_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...va03_T2star_label-discs_desc-warp_dlabel.nii.gz} | 0 ... sub-vuiisAchieva03_T2w_label-discs_dlabel.json} | 0 ...ub-vuiisAchieva03_T2w_label-discs_dlabel.nii.gz} | 0 ...ip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...p-2_mt-off_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ..._mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...Achieva03_space-other_T2star_label-SC_seg.nii.gz | 2 +- ...e-other_T2star_label-discs_desc-warp_dlabel.json | 12 ------------ ... sub-vuiisAchieva04_T1w_label-discs_dlabel.json} | 0 ...ub-vuiisAchieva04_T1w_label-discs_dlabel.nii.gz} | 0 ...hieva04_T2star_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...va04_T2star_label-discs_desc-warp_dlabel.nii.gz} | 0 ... sub-vuiisAchieva04_T2w_label-discs_dlabel.json} | 0 ...ub-vuiisAchieva04_T2w_label-discs_dlabel.nii.gz} | 0 ...ip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...p-2_mt-off_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ..._mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...Achieva04_space-other_T2star_label-SC_seg.nii.gz | 2 +- ...e-other_T2star_label-discs_desc-warp_dlabel.json | 12 ------------ ... sub-vuiisAchieva05_T1w_label-discs_dlabel.json} | 0 ...ub-vuiisAchieva05_T1w_label-discs_dlabel.nii.gz} | 0 ...hieva05_T2star_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...va05_T2star_label-discs_desc-warp_dlabel.nii.gz} | 0 ... sub-vuiisAchieva05_T2w_label-discs_dlabel.json} | 0 ...ub-vuiisAchieva05_T2w_label-discs_dlabel.nii.gz} | 0 ...ip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...p-2_mt-off_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ..._mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...Achieva05_space-other_T2star_label-SC_seg.nii.gz | 2 +- ...e-other_T2star_label-discs_desc-warp_dlabel.json | 12 ------------ ... sub-vuiisAchieva06_T1w_label-discs_dlabel.json} | 0 ...ub-vuiisAchieva06_T1w_label-discs_dlabel.nii.gz} | 0 ...hieva06_T2star_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...va06_T2star_label-discs_desc-warp_dlabel.nii.gz} | 0 ... sub-vuiisAchieva06_T2w_label-discs_dlabel.json} | 0 ...ub-vuiisAchieva06_T2w_label-discs_dlabel.nii.gz} | 0 ...ip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...p-2_mt-off_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ..._mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...Achieva06_space-other_T2star_label-SC_seg.nii.gz | 2 +- ...e-other_T2star_label-discs_desc-warp_dlabel.json | 12 ------------ ... sub-vuiisIngenia01_T1w_label-discs_dlabel.json} | 0 ...ub-vuiisIngenia01_T1w_label-discs_dlabel.nii.gz} | 0 ...genia01_T2star_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...ia01_T2star_label-discs_desc-warp_dlabel.nii.gz} | 0 ... sub-vuiisIngenia01_T2w_label-discs_dlabel.json} | 0 ...ub-vuiisIngenia01_T2w_label-discs_dlabel.nii.gz} | 0 ...ip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...p-2_mt-off_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ..._mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...Ingenia01_space-other_T2star_label-SC_seg.nii.gz | 2 +- ...e-other_T2star_label-discs_desc-warp_dlabel.json | 12 ------------ ... sub-vuiisIngenia02_T1w_label-discs_dlabel.json} | 0 ...ub-vuiisIngenia02_T1w_label-discs_dlabel.nii.gz} | 0 ...genia02_T2star_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...ia02_T2star_label-discs_desc-warp_dlabel.nii.gz} | 0 ... sub-vuiisIngenia02_T2w_label-discs_dlabel.json} | 0 ...ub-vuiisIngenia02_T2w_label-discs_dlabel.nii.gz} | 0 ...ip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...p-2_mt-off_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ..._mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...Ingenia02_space-other_T2star_label-SC_seg.nii.gz | 2 +- ...e-other_T2star_label-discs_desc-warp_dlabel.json | 12 ------------ ... sub-vuiisIngenia03_T1w_label-discs_dlabel.json} | 0 ...ub-vuiisIngenia03_T1w_label-discs_dlabel.nii.gz} | 0 ...genia03_T2star_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...ia03_T2star_label-discs_desc-warp_dlabel.nii.gz} | 0 ... sub-vuiisIngenia03_T2w_label-discs_dlabel.json} | 0 ...ub-vuiisIngenia03_T2w_label-discs_dlabel.nii.gz} | 0 ...ip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...p-2_mt-off_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ..._mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...genia03_space-other_T2star_gmlabel-SC_seg.nii.gz | 2 +- ...Ingenia03_space-other_T2star_label-SC_seg.nii.gz | 2 +- ...e-other_T2star_label-discs_desc-warp_dlabel.json | 12 ------------ ... sub-vuiisIngenia04_T1w_label-discs_dlabel.json} | 0 ...ub-vuiisIngenia04_T1w_label-discs_dlabel.nii.gz} | 0 ...genia04_T2star_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...ia04_T2star_label-discs_desc-warp_dlabel.nii.gz} | 0 ... sub-vuiisIngenia04_T2w_label-discs_dlabel.json} | 0 ...ub-vuiisIngenia04_T2w_label-discs_dlabel.nii.gz} | 0 ...ip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...p-2_mt-off_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ..._mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...Ingenia04_space-other_T2star_label-SC_seg.nii.gz | 2 +- ...e-other_T2star_label-discs_desc-warp_dlabel.json | 12 ------------ ... sub-vuiisIngenia05_T1w_label-discs_dlabel.json} | 0 ...ub-vuiisIngenia05_T1w_label-discs_dlabel.nii.gz} | 0 ...genia05_T2star_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...ia05_T2star_label-discs_desc-warp_dlabel.nii.gz} | 0 ... sub-vuiisIngenia05_T2w_label-discs_dlabel.json} | 0 ...ub-vuiisIngenia05_T2w_label-discs_dlabel.nii.gz} | 0 ...ip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...p-2_mt-off_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ..._mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...-other_T1w_label-vertebrae_desc-C2C5_dlabel.json | 11 +++++++++++ ...her_T1w_label-vertebrae_desc-C2C5_dlabel.nii.gz} | 0 ...Ingenia05_space-other_T2star_label-SC_seg.nii.gz | 2 +- ...e-other_T2star_label-discs_desc-warp_dlabel.json | 12 ------------ ... sub-vuiisIngenia06_T1w_label-discs_dlabel.json} | 0 ...ub-vuiisIngenia06_T1w_label-discs_dlabel.nii.gz} | 0 ...genia06_T2star_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...ia06_T2star_label-discs_desc-warp_dlabel.nii.gz} | 0 ... sub-vuiisIngenia06_T2w_label-discs_dlabel.json} | 0 ...ub-vuiisIngenia06_T2w_label-discs_dlabel.nii.gz} | 0 ...ip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ...1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...p-2_mt-off_MTS_label-discs_desc-warp_dlabel.json | 9 +++++++++ ..._mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} | 0 ...pace-other_MTS_label-discs_desc-warp_dlabel.json | 12 ------------ ...Ingenia06_space-other_T2star_label-SC_seg.nii.gz | 2 +- ...e-other_T2star_label-discs_desc-warp_dlabel.json | 12 ------------ 3639 files changed, 7274 insertions(+), 9004 deletions(-) rename derivatives/labels/sub-amu01/anat/{sub-amu01_space-other_T1w_label-discs_dlabel.json => sub-amu01_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-amu01/anat/{sub-amu01_space-other_T1w_label-discs_dlabel.nii.gz => sub-amu01_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-amu01/anat/{sub-amu01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json => sub-amu01_T2star_label-discs_desc-warp_dlabel.json} (75%) rename derivatives/labels/sub-amu01/anat/{sub-amu01_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz => sub-amu01_T2star_label-discs_desc-warp_dlabel.nii.gz} (100%) rename derivatives/labels/sub-amu01/anat/{sub-amu01_space-other_T2w_label-discs_dlabel.json => sub-amu01_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-amu01/anat/{sub-amu01_space-other_T2w_label-discs_dlabel.nii.gz => sub-amu01_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-amu01/anat/{sub-amu01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json => sub-amu01_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json} (75%) rename derivatives/labels/sub-amu01/anat/{sub-amu01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-amu01_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) rename derivatives/labels/sub-amu01/anat/{sub-amu01_space-other_T2star_label-discs_desc-warp_dlabel.json => sub-amu01_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json} (75%) rename derivatives/labels/sub-amu01/anat/{sub-amu01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-amu01_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) rename derivatives/labels/sub-amu02/anat/{sub-amu02_space-other_T1w_label-discs_dlabel.json => sub-amu02_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-amu02/anat/{sub-amu02_space-other_T1w_label-discs_dlabel.nii.gz => sub-amu02_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-amu02/anat/{sub-amu02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json => sub-amu02_T2star_label-discs_desc-warp_dlabel.json} (75%) rename derivatives/labels/sub-amu02/anat/{sub-amu02_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz => sub-amu02_T2star_label-discs_desc-warp_dlabel.nii.gz} (100%) rename derivatives/labels/sub-amu02/anat/{sub-amu02_space-other_T2w_label-discs_dlabel.json => sub-amu02_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-amu02/anat/{sub-amu02_space-other_T2w_label-discs_dlabel.nii.gz => sub-amu02_T2w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-amu02/anat/sub-amu02_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-amu02/anat/{sub-amu02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-amu02_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-amu02/anat/sub-amu02_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-amu02/anat/{sub-amu02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-amu02_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-amu02/anat/sub-amu02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-amu02/anat/sub-amu02_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.json rename derivatives/labels/sub-amu02/anat/{sub-amu02_space-other_T1w_RPI_r_labels-manual.nii.gz => sub-amu02_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-amu02/anat/sub-amu02_space-other_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-amu03/anat/{sub-amu03_space-other_T1w_label-discs_dlabel.json => sub-amu03_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-amu03/anat/{sub-amu03_space-other_T1w_label-discs_dlabel.nii.gz => sub-amu03_T1w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-amu03/anat/sub-amu03_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-amu03/anat/{sub-amu03_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz => sub-amu03_T2star_label-discs_desc-warp_dlabel.nii.gz} (100%) rename derivatives/labels/sub-amu03/anat/{sub-amu03_space-other_T2w_label-discs_dlabel.json => sub-amu03_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-amu03/anat/{sub-amu03_space-other_T2w_label-discs_dlabel.nii.gz => sub-amu03_T2w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-amu03/anat/sub-amu03_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-amu03/anat/{sub-amu03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-amu03_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-amu03/anat/sub-amu03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-amu03/anat/sub-amu03_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-amu03/anat/{sub-amu03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-amu03_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-amu03/anat/sub-amu03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json delete mode 100644 derivatives/labels/sub-amu03/anat/sub-amu03_space-other_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-amu04/anat/{sub-amu04_space-other_T1w_label-discs_dlabel.json => sub-amu04_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-amu04/anat/{sub-amu04_space-other_T1w_label-discs_dlabel.nii.gz => sub-amu04_T1w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-amu04/anat/sub-amu04_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-amu04/anat/{sub-amu04_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz => sub-amu04_T2star_label-discs_desc-warp_dlabel.nii.gz} (100%) rename derivatives/labels/sub-amu04/anat/{sub-amu04_space-other_T2w_label-discs_dlabel.json => sub-amu04_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-amu04/anat/{sub-amu04_space-other_T2w_label-discs_dlabel.nii.gz => sub-amu04_T2w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-amu04/anat/sub-amu04_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-amu04/anat/{sub-amu04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-amu04_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-amu04/anat/sub-amu04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-amu04/anat/sub-amu04_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-amu04/anat/{sub-amu04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-amu04_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-amu04/anat/sub-amu04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-amu04/anat/sub-amu04_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.json rename derivatives/labels/sub-amu04/anat/{sub-amu04_space-other_T1w_RPI_r_labels-manual.nii.gz => sub-amu04_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-amu04/anat/sub-amu04_space-other_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-amu05/anat/{sub-amu05_space-other_T1w_label-discs_dlabel.json => sub-amu05_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-amu05/anat/{sub-amu05_space-other_T1w_label-discs_dlabel.nii.gz => sub-amu05_T1w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-amu05/anat/sub-amu05_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-amu05/anat/{sub-amu05_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz => sub-amu05_T2star_label-discs_desc-warp_dlabel.nii.gz} (100%) rename derivatives/labels/sub-amu05/anat/{sub-amu05_space-other_T2w_label-discs_dlabel.json => sub-amu05_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-amu05/anat/{sub-amu05_space-other_T2w_label-discs_dlabel.nii.gz => sub-amu05_T2w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-amu05/anat/sub-amu05_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-amu05/anat/{sub-amu05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-amu05_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-amu05/anat/sub-amu05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-amu05/anat/sub-amu05_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-amu05/anat/{sub-amu05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-amu05_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-amu05/anat/sub-amu05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-amu05/anat/sub-amu05_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.json rename derivatives/labels/sub-amu05/anat/{sub-amu05_space-other_T1w_RPI_r_labels-manual.nii.gz => sub-amu05_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-amu05/anat/sub-amu05_space-other_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-balgrist01/anat/{sub-balgrist01_space-other_T1w_label-discs_dlabel.json => sub-balgrist01_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-balgrist01/anat/{sub-balgrist01_space-other_T1w_label-discs_dlabel.nii.gz => sub-balgrist01_T1w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-balgrist01/anat/sub-balgrist01_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-balgrist01/anat/{sub-balgrist01_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz => sub-balgrist01_T2star_label-discs_desc-warp_dlabel.nii.gz} (100%) rename derivatives/labels/sub-balgrist01/anat/{sub-balgrist01_space-other_T2w_label-discs_dlabel.json => sub-balgrist01_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-balgrist01/anat/{sub-balgrist01_space-other_T2w_label-discs_dlabel.nii.gz => sub-balgrist01_T2w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-balgrist01/anat/sub-balgrist01_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-balgrist01/anat/{sub-balgrist01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-balgrist01_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-balgrist01/anat/sub-balgrist01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-balgrist01/anat/sub-balgrist01_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-balgrist01/anat/{sub-balgrist01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-balgrist01_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-balgrist01/anat/sub-balgrist01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json delete mode 100644 derivatives/labels/sub-balgrist01/anat/sub-balgrist01_space-other_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-balgrist02/anat/{sub-balgrist02_space-other_T1w_label-discs_dlabel.json => sub-balgrist02_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-balgrist02/anat/{sub-balgrist02_space-other_T1w_label-discs_dlabel.nii.gz => sub-balgrist02_T1w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-balgrist02/anat/sub-balgrist02_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-balgrist02/anat/{sub-balgrist02_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz => sub-balgrist02_T2star_label-discs_desc-warp_dlabel.nii.gz} (100%) rename derivatives/labels/sub-balgrist02/anat/{sub-balgrist02_space-other_T2w_label-discs_dlabel.json => sub-balgrist02_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-balgrist02/anat/{sub-balgrist02_space-other_T2w_label-discs_dlabel.nii.gz => sub-balgrist02_T2w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-balgrist02/anat/sub-balgrist02_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-balgrist02/anat/{sub-balgrist02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-balgrist02_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-balgrist02/anat/sub-balgrist02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-balgrist02/anat/sub-balgrist02_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-balgrist02/anat/{sub-balgrist02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-balgrist02_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-balgrist02/anat/sub-balgrist02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json delete mode 100644 derivatives/labels/sub-balgrist02/anat/sub-balgrist02_space-other_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-balgrist03/anat/{sub-balgrist03_space-other_T1w_label-discs_dlabel.json => sub-balgrist03_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-balgrist03/anat/{sub-balgrist03_space-other_T1w_label-discs_dlabel.nii.gz => sub-balgrist03_T1w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-balgrist03/anat/sub-balgrist03_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-balgrist03/anat/{sub-balgrist03_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz => sub-balgrist03_T2star_label-discs_desc-warp_dlabel.nii.gz} (100%) rename derivatives/labels/sub-balgrist03/anat/{sub-balgrist03_space-other_T2w_label-discs_dlabel.json => sub-balgrist03_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-balgrist03/anat/{sub-balgrist03_space-other_T2w_label-discs_dlabel.nii.gz => sub-balgrist03_T2w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-balgrist03/anat/sub-balgrist03_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-balgrist03/anat/{sub-balgrist03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-balgrist03_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-balgrist03/anat/sub-balgrist03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-balgrist03/anat/sub-balgrist03_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-balgrist03/anat/{sub-balgrist03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-balgrist03_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-balgrist03/anat/sub-balgrist03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json delete mode 100644 derivatives/labels/sub-balgrist03/anat/sub-balgrist03_space-other_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-balgrist04/anat/{sub-balgrist04_space-other_T1w_label-discs_dlabel.json => sub-balgrist04_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-balgrist04/anat/{sub-balgrist04_space-other_T1w_label-discs_dlabel.nii.gz => sub-balgrist04_T1w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-balgrist04/anat/sub-balgrist04_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-balgrist04/anat/{sub-balgrist04_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz => sub-balgrist04_T2star_label-discs_desc-warp_dlabel.nii.gz} (100%) rename derivatives/labels/sub-balgrist04/anat/{sub-balgrist04_space-other_T2w_label-discs_dlabel.json => sub-balgrist04_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-balgrist04/anat/{sub-balgrist04_space-other_T2w_label-discs_dlabel.nii.gz => sub-balgrist04_T2w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-balgrist04/anat/sub-balgrist04_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-balgrist04/anat/{sub-balgrist04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-balgrist04_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-balgrist04/anat/sub-balgrist04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-balgrist04/anat/sub-balgrist04_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-balgrist04/anat/{sub-balgrist04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-balgrist04_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-balgrist04/anat/sub-balgrist04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json delete mode 100644 derivatives/labels/sub-balgrist04/anat/sub-balgrist04_space-other_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-balgrist05/anat/{sub-balgrist05_space-other_T1w_label-discs_dlabel.json => sub-balgrist05_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-balgrist05/anat/{sub-balgrist05_space-other_T1w_label-discs_dlabel.nii.gz => sub-balgrist05_T1w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-balgrist05/anat/sub-balgrist05_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-balgrist05/anat/{sub-balgrist05_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz => sub-balgrist05_T2star_label-discs_desc-warp_dlabel.nii.gz} (100%) rename derivatives/labels/sub-balgrist05/anat/{sub-balgrist05_space-other_T2w_label-discs_dlabel.json => sub-balgrist05_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-balgrist05/anat/{sub-balgrist05_space-other_T2w_label-discs_dlabel.nii.gz => sub-balgrist05_T2w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-balgrist05/anat/sub-balgrist05_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-balgrist05/anat/{sub-balgrist05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-balgrist05_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-balgrist05/anat/sub-balgrist05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-balgrist05/anat/sub-balgrist05_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-balgrist05/anat/{sub-balgrist05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-balgrist05_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-balgrist05/anat/sub-balgrist05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json delete mode 100644 derivatives/labels/sub-balgrist05/anat/sub-balgrist05_space-other_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-balgrist06/anat/{sub-balgrist06_space-other_T1w_label-discs_dlabel.json => sub-balgrist06_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-balgrist06/anat/{sub-balgrist06_space-other_T1w_label-discs_dlabel.nii.gz => sub-balgrist06_T1w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-balgrist06/anat/sub-balgrist06_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-balgrist06/anat/{sub-balgrist06_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz => sub-balgrist06_T2star_label-discs_desc-warp_dlabel.nii.gz} (100%) rename derivatives/labels/sub-balgrist06/anat/{sub-balgrist06_space-other_T2w_label-discs_dlabel.json => sub-balgrist06_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-balgrist06/anat/{sub-balgrist06_space-other_T2w_label-discs_dlabel.nii.gz => sub-balgrist06_T2w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-balgrist06/anat/sub-balgrist06_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-balgrist06/anat/{sub-balgrist06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-balgrist06_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-balgrist06/anat/sub-balgrist06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-balgrist06/anat/sub-balgrist06_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-balgrist06/anat/{sub-balgrist06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-balgrist06_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-balgrist06/anat/sub-balgrist06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json delete mode 100644 derivatives/labels/sub-balgrist06/anat/sub-balgrist06_space-other_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-barcelona01/anat/{sub-barcelona01_space-other_T1w_label-discs_dlabel.json => sub-barcelona01_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-barcelona01/anat/{sub-barcelona01_space-other_T1w_label-discs_dlabel.nii.gz => sub-barcelona01_T1w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-barcelona01/anat/sub-barcelona01_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-barcelona01/anat/{sub-barcelona01_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz => sub-barcelona01_T2star_label-discs_desc-warp_dlabel.nii.gz} (100%) rename derivatives/labels/sub-barcelona01/anat/{sub-barcelona01_space-other_T2w_label-discs_dlabel.json => sub-barcelona01_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-barcelona01/anat/{sub-barcelona01_space-other_T2w_label-discs_dlabel.nii.gz => sub-barcelona01_T2w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-barcelona01/anat/sub-barcelona01_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-barcelona01/anat/{sub-barcelona01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-barcelona01_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-barcelona01/anat/sub-barcelona01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-barcelona01/anat/sub-barcelona01_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-barcelona01/anat/{sub-barcelona01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-barcelona01_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-barcelona01/anat/sub-barcelona01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json delete mode 100644 derivatives/labels/sub-barcelona01/anat/sub-barcelona01_space-other_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-barcelona02/anat/{sub-barcelona02_space-other_T1w_label-discs_dlabel.json => sub-barcelona02_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-barcelona02/anat/{sub-barcelona02_space-other_T1w_label-discs_dlabel.nii.gz => sub-barcelona02_T1w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-barcelona02/anat/sub-barcelona02_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-barcelona02/anat/{sub-barcelona02_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz => sub-barcelona02_T2star_label-discs_desc-warp_dlabel.nii.gz} (100%) rename derivatives/labels/sub-barcelona02/anat/{sub-barcelona02_space-other_T2w_label-discs_dlabel.json => sub-barcelona02_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-barcelona02/anat/{sub-barcelona02_space-other_T2w_label-discs_dlabel.nii.gz => sub-barcelona02_T2w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-barcelona02/anat/sub-barcelona02_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-barcelona02/anat/{sub-barcelona02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-barcelona02_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-barcelona02/anat/sub-barcelona02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-barcelona02/anat/sub-barcelona02_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-barcelona02/anat/{sub-barcelona02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-barcelona02_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-barcelona02/anat/sub-barcelona02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json delete mode 100644 derivatives/labels/sub-barcelona02/anat/sub-barcelona02_space-other_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-barcelona03/anat/{sub-barcelona03_space-other_T1w_label-discs_dlabel.json => sub-barcelona03_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-barcelona03/anat/{sub-barcelona03_space-other_T1w_label-discs_dlabel.nii.gz => sub-barcelona03_T1w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-barcelona03/anat/sub-barcelona03_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-barcelona03/anat/{sub-barcelona03_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz => sub-barcelona03_T2star_label-discs_desc-warp_dlabel.nii.gz} (100%) rename derivatives/labels/sub-barcelona03/anat/{sub-barcelona03_space-other_T2w_label-discs_dlabel.json => sub-barcelona03_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-barcelona03/anat/{sub-barcelona03_space-other_T2w_label-discs_dlabel.nii.gz => sub-barcelona03_T2w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-barcelona03/anat/sub-barcelona03_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-barcelona03/anat/{sub-barcelona03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-barcelona03_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-barcelona03/anat/sub-barcelona03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-barcelona03/anat/sub-barcelona03_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-barcelona03/anat/{sub-barcelona03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-barcelona03_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-barcelona03/anat/sub-barcelona03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json delete mode 100644 derivatives/labels/sub-barcelona03/anat/sub-barcelona03_space-other_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-barcelona04/anat/{sub-barcelona04_space-other_T1w_label-discs_dlabel.json => sub-barcelona04_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-barcelona04/anat/{sub-barcelona04_space-other_T1w_label-discs_dlabel.nii.gz => sub-barcelona04_T1w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-barcelona04/anat/sub-barcelona04_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-barcelona04/anat/{sub-barcelona04_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz => sub-barcelona04_T2star_label-discs_desc-warp_dlabel.nii.gz} (100%) rename derivatives/labels/sub-barcelona04/anat/{sub-barcelona04_space-other_T2w_label-discs_dlabel.json => sub-barcelona04_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-barcelona04/anat/{sub-barcelona04_space-other_T2w_label-discs_dlabel.nii.gz => sub-barcelona04_T2w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-barcelona04/anat/sub-barcelona04_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-barcelona04/anat/{sub-barcelona04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-barcelona04_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-barcelona04/anat/sub-barcelona04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-barcelona04/anat/sub-barcelona04_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-barcelona04/anat/{sub-barcelona04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-barcelona04_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-barcelona04/anat/sub-barcelona04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json delete mode 100644 derivatives/labels/sub-barcelona04/anat/sub-barcelona04_space-other_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-barcelona05/anat/{sub-barcelona05_space-other_T1w_label-discs_dlabel.json => sub-barcelona05_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-barcelona05/anat/{sub-barcelona05_space-other_T1w_label-discs_dlabel.nii.gz => sub-barcelona05_T1w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-barcelona05/anat/sub-barcelona05_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-barcelona05/anat/{sub-barcelona05_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz => sub-barcelona05_T2star_label-discs_desc-warp_dlabel.nii.gz} (100%) rename derivatives/labels/sub-barcelona05/anat/{sub-barcelona05_space-other_T2w_label-discs_dlabel.json => sub-barcelona05_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-barcelona05/anat/{sub-barcelona05_space-other_T2w_label-discs_dlabel.nii.gz => sub-barcelona05_T2w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-barcelona05/anat/sub-barcelona05_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-barcelona05/anat/{sub-barcelona05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-barcelona05_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-barcelona05/anat/sub-barcelona05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-barcelona05/anat/sub-barcelona05_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-barcelona05/anat/{sub-barcelona05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-barcelona05_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-barcelona05/anat/sub-barcelona05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json delete mode 100644 derivatives/labels/sub-barcelona05/anat/sub-barcelona05_space-other_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-barcelona05/anat/{sub-barcelona05_space-other_T2w_csflabel-SC_seg.json => sub-barcelona05_space-other_T2w_label-CSF_seg.json} (100%) rename derivatives/labels/sub-barcelona05/anat/{sub-barcelona05_space-other_T2w_csflabel-SC_seg.nii.gz => sub-barcelona05_space-other_T2w_label-CSF_seg.nii.gz} (100%) create mode 100644 derivatives/labels/sub-barcelona05/anat/sub-barcelona05_space-other_T2w_label-canal_seg.json create mode 100644 derivatives/labels/sub-barcelona05/anat/sub-barcelona05_space-other_T2w_label-canal_seg.nii.gz rename derivatives/labels/sub-barcelona06/anat/{sub-barcelona06_space-other_T1w_label-discs_dlabel.json => sub-barcelona06_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-barcelona06/anat/{sub-barcelona06_space-other_T1w_label-discs_dlabel.nii.gz => sub-barcelona06_T1w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-barcelona06/anat/sub-barcelona06_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-barcelona06/anat/{sub-barcelona06_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz => sub-barcelona06_T2star_label-discs_desc-warp_dlabel.nii.gz} (100%) rename derivatives/labels/sub-barcelona06/anat/{sub-barcelona06_space-other_T2w_label-discs_dlabel.json => sub-barcelona06_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-barcelona06/anat/{sub-barcelona06_space-other_T2w_label-discs_dlabel.nii.gz => sub-barcelona06_T2w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-barcelona06/anat/sub-barcelona06_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-barcelona06/anat/{sub-barcelona06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-barcelona06_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-barcelona06/anat/sub-barcelona06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-barcelona06/anat/sub-barcelona06_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-barcelona06/anat/{sub-barcelona06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-barcelona06_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-barcelona06/anat/sub-barcelona06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json delete mode 100644 derivatives/labels/sub-barcelona06/anat/sub-barcelona06_space-other_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-beijingGE01/anat/{sub-beijingGE01_space-other_T1w_label-discs_dlabel.json => sub-beijingGE01_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-beijingGE01/anat/{sub-beijingGE01_space-other_T1w_label-discs_dlabel.nii.gz => sub-beijingGE01_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-beijingGE01/anat/{sub-beijingGE01_space-other_T2w_label-discs_dlabel.json => sub-beijingGE01_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-beijingGE01/anat/{sub-beijingGE01_space-other_T2w_label-discs_dlabel.nii.gz => sub-beijingGE01_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-beijingGE02/anat/{sub-beijingGE02_space-other_T1w_label-discs_dlabel.json => sub-beijingGE02_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-beijingGE02/anat/{sub-beijingGE02_space-other_T1w_label-discs_dlabel.nii.gz => sub-beijingGE02_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-beijingGE02/anat/{sub-beijingGE02_space-other_T2w_label-discs_dlabel.json => sub-beijingGE02_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-beijingGE02/anat/{sub-beijingGE02_space-other_T2w_label-discs_dlabel.nii.gz => sub-beijingGE02_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-beijingGE03/anat/{sub-beijingGE03_space-other_T1w_label-discs_dlabel.json => sub-beijingGE03_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-beijingGE03/anat/{sub-beijingGE03_space-other_T1w_label-discs_dlabel.nii.gz => sub-beijingGE03_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-beijingGE03/anat/{sub-beijingGE03_space-other_T2w_label-discs_dlabel.json => sub-beijingGE03_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-beijingGE03/anat/{sub-beijingGE03_space-other_T2w_label-discs_dlabel.nii.gz => sub-beijingGE03_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-beijingGE04/anat/{sub-beijingGE04_space-other_T1w_label-discs_dlabel.json => sub-beijingGE04_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-beijingGE04/anat/{sub-beijingGE04_space-other_T1w_label-discs_dlabel.nii.gz => sub-beijingGE04_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-beijingGE04/anat/{sub-beijingGE04_space-other_T2w_label-discs_dlabel.json => sub-beijingGE04_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-beijingGE04/anat/{sub-beijingGE04_space-other_T2w_label-discs_dlabel.nii.gz => sub-beijingGE04_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-beijingPrisma01/anat/{sub-beijingPrisma01_space-other_T1w_label-discs_dlabel.json => sub-beijingPrisma01_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-beijingPrisma01/anat/{sub-beijingPrisma01_space-other_T1w_label-discs_dlabel.nii.gz => sub-beijingPrisma01_T1w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-beijingPrisma01/anat/sub-beijingPrisma01_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-beijingPrisma01/anat/{sub-beijingPrisma01_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz => sub-beijingPrisma01_T2star_label-discs_desc-warp_dlabel.nii.gz} (100%) rename derivatives/labels/sub-beijingPrisma01/anat/{sub-beijingPrisma01_space-other_T2w_label-discs_dlabel.json => sub-beijingPrisma01_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-beijingPrisma01/anat/{sub-beijingPrisma01_space-other_T2w_label-discs_dlabel.nii.gz => sub-beijingPrisma01_T2w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-beijingPrisma01/anat/sub-beijingPrisma01_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-beijingPrisma01/anat/{sub-beijingPrisma01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-beijingPrisma01_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-beijingPrisma01/anat/sub-beijingPrisma01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-beijingPrisma01/anat/sub-beijingPrisma01_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-beijingPrisma01/anat/{sub-beijingPrisma01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-beijingPrisma01_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-beijingPrisma01/anat/sub-beijingPrisma01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json delete mode 100644 derivatives/labels/sub-beijingPrisma01/anat/sub-beijingPrisma01_space-other_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-beijingPrisma02/anat/{sub-beijingPrisma02_space-other_T1w_label-discs_dlabel.json => sub-beijingPrisma02_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-beijingPrisma02/anat/{sub-beijingPrisma02_space-other_T1w_label-discs_dlabel.nii.gz => sub-beijingPrisma02_T1w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-beijingPrisma02/anat/sub-beijingPrisma02_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-beijingPrisma02/anat/{sub-beijingPrisma02_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz => sub-beijingPrisma02_T2star_label-discs_desc-warp_dlabel.nii.gz} (100%) rename derivatives/labels/sub-beijingPrisma02/anat/{sub-beijingPrisma02_space-other_T2w_label-discs_dlabel.json => sub-beijingPrisma02_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-beijingPrisma02/anat/{sub-beijingPrisma02_space-other_T2w_label-discs_dlabel.nii.gz => sub-beijingPrisma02_T2w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-beijingPrisma02/anat/sub-beijingPrisma02_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-beijingPrisma02/anat/{sub-beijingPrisma02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-beijingPrisma02_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-beijingPrisma02/anat/sub-beijingPrisma02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-beijingPrisma02/anat/sub-beijingPrisma02_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-beijingPrisma02/anat/{sub-beijingPrisma02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-beijingPrisma02_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-beijingPrisma02/anat/sub-beijingPrisma02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json delete mode 100644 derivatives/labels/sub-beijingPrisma02/anat/sub-beijingPrisma02_space-other_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-beijingPrisma03/anat/{sub-beijingPrisma03_space-other_T1w_label-discs_dlabel.json => sub-beijingPrisma03_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-beijingPrisma03/anat/{sub-beijingPrisma03_space-other_T1w_label-discs_dlabel.nii.gz => sub-beijingPrisma03_T1w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-beijingPrisma03/anat/sub-beijingPrisma03_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-beijingPrisma03/anat/{sub-beijingPrisma03_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz => sub-beijingPrisma03_T2star_label-discs_desc-warp_dlabel.nii.gz} (100%) rename derivatives/labels/sub-beijingPrisma03/anat/{sub-beijingPrisma03_space-other_T2w_label-discs_dlabel.json => sub-beijingPrisma03_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-beijingPrisma03/anat/{sub-beijingPrisma03_space-other_T2w_label-discs_dlabel.nii.gz => sub-beijingPrisma03_T2w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-beijingPrisma03/anat/sub-beijingPrisma03_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-beijingPrisma03/anat/{sub-beijingPrisma03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-beijingPrisma03_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-beijingPrisma03/anat/sub-beijingPrisma03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-beijingPrisma03/anat/sub-beijingPrisma03_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-beijingPrisma03/anat/{sub-beijingPrisma03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-beijingPrisma03_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-beijingPrisma03/anat/sub-beijingPrisma03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json delete mode 100644 derivatives/labels/sub-beijingPrisma03/anat/sub-beijingPrisma03_space-other_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-beijingPrisma04/anat/{sub-beijingPrisma04_space-other_T1w_label-discs_dlabel.json => sub-beijingPrisma04_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-beijingPrisma04/anat/{sub-beijingPrisma04_space-other_T1w_label-discs_dlabel.nii.gz => sub-beijingPrisma04_T1w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-beijingPrisma04/anat/sub-beijingPrisma04_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-beijingPrisma04/anat/{sub-beijingPrisma04_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz => sub-beijingPrisma04_T2star_label-discs_desc-warp_dlabel.nii.gz} (100%) rename derivatives/labels/sub-beijingPrisma04/anat/{sub-beijingPrisma04_space-other_T2w_label-discs_dlabel.json => sub-beijingPrisma04_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-beijingPrisma04/anat/{sub-beijingPrisma04_space-other_T2w_label-discs_dlabel.nii.gz => sub-beijingPrisma04_T2w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-beijingPrisma04/anat/sub-beijingPrisma04_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-beijingPrisma04/anat/{sub-beijingPrisma04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-beijingPrisma04_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-beijingPrisma04/anat/sub-beijingPrisma04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-beijingPrisma04/anat/sub-beijingPrisma04_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-beijingPrisma04/anat/{sub-beijingPrisma04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-beijingPrisma04_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-beijingPrisma04/anat/sub-beijingPrisma04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json delete mode 100644 derivatives/labels/sub-beijingPrisma04/anat/sub-beijingPrisma04_space-other_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-beijingPrisma05/anat/{sub-beijingPrisma05_space-other_T1w_label-discs_dlabel.json => sub-beijingPrisma05_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-beijingPrisma05/anat/{sub-beijingPrisma05_space-other_T1w_label-discs_dlabel.nii.gz => sub-beijingPrisma05_T1w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-beijingPrisma05/anat/sub-beijingPrisma05_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-beijingPrisma05/anat/{sub-beijingPrisma05_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz => sub-beijingPrisma05_T2star_label-discs_desc-warp_dlabel.nii.gz} (100%) rename derivatives/labels/sub-beijingPrisma05/anat/{sub-beijingPrisma05_space-other_T2w_label-discs_dlabel.json => sub-beijingPrisma05_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-beijingPrisma05/anat/{sub-beijingPrisma05_space-other_T2w_label-discs_dlabel.nii.gz => sub-beijingPrisma05_T2w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-beijingPrisma05/anat/sub-beijingPrisma05_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-beijingPrisma05/anat/{sub-beijingPrisma05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-beijingPrisma05_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-beijingPrisma05/anat/sub-beijingPrisma05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-beijingPrisma05/anat/sub-beijingPrisma05_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-beijingPrisma05/anat/{sub-beijingPrisma05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-beijingPrisma05_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-beijingPrisma05/anat/sub-beijingPrisma05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json delete mode 100644 derivatives/labels/sub-beijingPrisma05/anat/sub-beijingPrisma05_space-other_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-beijingVerio01/anat/{sub-beijingVerio01_space-other_T1w_label-discs_dlabel.json => sub-beijingVerio01_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-beijingVerio01/anat/{sub-beijingVerio01_space-other_T1w_label-discs_dlabel.nii.gz => sub-beijingVerio01_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-beijingVerio01/anat/{sub-beijingVerio01_space-other_T2w_label-discs_dlabel.json => sub-beijingVerio01_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-beijingVerio01/anat/{sub-beijingVerio01_space-other_T2w_label-discs_dlabel.nii.gz => sub-beijingVerio01_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-beijingVerio02/anat/{sub-beijingVerio02_space-other_T1w_label-discs_dlabel.json => sub-beijingVerio02_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-beijingVerio02/anat/{sub-beijingVerio02_space-other_T1w_label-discs_dlabel.nii.gz => sub-beijingVerio02_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-beijingVerio02/anat/{sub-beijingVerio02_space-other_T2w_label-discs_dlabel.json => sub-beijingVerio02_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-beijingVerio02/anat/{sub-beijingVerio02_space-other_T2w_label-discs_dlabel.nii.gz => sub-beijingVerio02_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-beijingVerio03/anat/{sub-beijingVerio03_space-other_T1w_label-discs_dlabel.json => sub-beijingVerio03_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-beijingVerio03/anat/{sub-beijingVerio03_space-other_T1w_label-discs_dlabel.nii.gz => sub-beijingVerio03_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-beijingVerio03/anat/{sub-beijingVerio03_space-other_T2w_label-discs_dlabel.json => sub-beijingVerio03_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-beijingVerio03/anat/{sub-beijingVerio03_space-other_T2w_label-discs_dlabel.nii.gz => sub-beijingVerio03_T2w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-beijingVerio03/anat/sub-beijingVerio03_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.json rename derivatives/labels/sub-beijingVerio03/anat/{sub-beijingVerio03_space-other_T1w_RPI_r_labels-manual.nii.gz => sub-beijingVerio03_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.nii.gz} (100%) rename derivatives/labels/sub-beijingVerio04/anat/{sub-beijingVerio04_space-other_T1w_label-discs_dlabel.json => sub-beijingVerio04_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-beijingVerio04/anat/{sub-beijingVerio04_space-other_T1w_label-discs_dlabel.nii.gz => sub-beijingVerio04_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-beijingVerio04/anat/{sub-beijingVerio04_space-other_T2w_label-discs_dlabel.json => sub-beijingVerio04_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-beijingVerio04/anat/{sub-beijingVerio04_space-other_T2w_label-discs_dlabel.nii.gz => sub-beijingVerio04_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-brnoCeitec01/anat/{sub-brnoCeitec01_space-other_T1w_label-discs_dlabel.json => sub-brnoCeitec01_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-brnoCeitec01/anat/{sub-brnoCeitec01_space-other_T1w_label-discs_dlabel.nii.gz => sub-brnoCeitec01_T1w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-brnoCeitec01/anat/sub-brnoCeitec01_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-brnoCeitec01/anat/{sub-brnoCeitec01_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz => sub-brnoCeitec01_T2star_label-discs_desc-warp_dlabel.nii.gz} (100%) rename derivatives/labels/sub-brnoCeitec01/anat/{sub-brnoCeitec01_space-other_T2w_label-discs_dlabel.json => sub-brnoCeitec01_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-brnoCeitec01/anat/{sub-brnoCeitec01_space-other_T2w_label-discs_dlabel.nii.gz => sub-brnoCeitec01_T2w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-brnoCeitec01/anat/sub-brnoCeitec01_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-brnoCeitec01/anat/{sub-brnoCeitec01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-brnoCeitec01_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-brnoCeitec01/anat/sub-brnoCeitec01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-brnoCeitec01/anat/sub-brnoCeitec01_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-brnoCeitec01/anat/{sub-brnoCeitec01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-brnoCeitec01_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-brnoCeitec01/anat/sub-brnoCeitec01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json delete mode 100644 derivatives/labels/sub-brnoCeitec01/anat/sub-brnoCeitec01_space-other_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-brnoCeitec02/anat/{sub-brnoCeitec02_space-other_T1w_label-discs_dlabel.json => sub-brnoCeitec02_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-brnoCeitec02/anat/{sub-brnoCeitec02_space-other_T1w_label-discs_dlabel.nii.gz => sub-brnoCeitec02_T1w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-brnoCeitec02/anat/sub-brnoCeitec02_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-brnoCeitec02/anat/{sub-brnoCeitec02_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz => sub-brnoCeitec02_T2star_label-discs_desc-warp_dlabel.nii.gz} (100%) rename derivatives/labels/sub-brnoCeitec02/anat/{sub-brnoCeitec02_space-other_T2w_label-discs_dlabel.json => sub-brnoCeitec02_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-brnoCeitec02/anat/{sub-brnoCeitec02_space-other_T2w_label-discs_dlabel.nii.gz => sub-brnoCeitec02_T2w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-brnoCeitec02/anat/sub-brnoCeitec02_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-brnoCeitec02/anat/{sub-brnoCeitec02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-brnoCeitec02_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-brnoCeitec02/anat/sub-brnoCeitec02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-brnoCeitec02/anat/sub-brnoCeitec02_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-brnoCeitec02/anat/{sub-brnoCeitec02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-brnoCeitec02_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-brnoCeitec02/anat/sub-brnoCeitec02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json delete mode 100644 derivatives/labels/sub-brnoCeitec02/anat/sub-brnoCeitec02_space-other_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-brnoCeitec03/anat/{sub-brnoCeitec03_space-other_T1w_label-discs_dlabel.json => sub-brnoCeitec03_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-brnoCeitec03/anat/{sub-brnoCeitec03_space-other_T1w_label-discs_dlabel.nii.gz => sub-brnoCeitec03_T1w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-brnoCeitec03/anat/sub-brnoCeitec03_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-brnoCeitec03/anat/{sub-brnoCeitec03_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz => sub-brnoCeitec03_T2star_label-discs_desc-warp_dlabel.nii.gz} (100%) rename derivatives/labels/sub-brnoCeitec03/anat/{sub-brnoCeitec03_space-other_T2w_label-discs_dlabel.json => sub-brnoCeitec03_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-brnoCeitec03/anat/{sub-brnoCeitec03_space-other_T2w_label-discs_dlabel.nii.gz => sub-brnoCeitec03_T2w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-brnoCeitec03/anat/sub-brnoCeitec03_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-brnoCeitec03/anat/{sub-brnoCeitec03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-brnoCeitec03_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-brnoCeitec03/anat/sub-brnoCeitec03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-brnoCeitec03/anat/sub-brnoCeitec03_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-brnoCeitec03/anat/{sub-brnoCeitec03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-brnoCeitec03_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-brnoCeitec03/anat/sub-brnoCeitec03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json delete mode 100644 derivatives/labels/sub-brnoCeitec03/anat/sub-brnoCeitec03_space-other_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-brnoCeitec04/anat/{sub-brnoCeitec04_space-other_T1w_label-discs_dlabel.json => sub-brnoCeitec04_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-brnoCeitec04/anat/{sub-brnoCeitec04_space-other_T1w_label-discs_dlabel.nii.gz => sub-brnoCeitec04_T1w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-brnoCeitec04/anat/sub-brnoCeitec04_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-brnoCeitec04/anat/{sub-brnoCeitec04_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz => sub-brnoCeitec04_T2star_label-discs_desc-warp_dlabel.nii.gz} (100%) rename derivatives/labels/sub-brnoCeitec04/anat/{sub-brnoCeitec04_space-other_T2w_label-discs_dlabel.json => sub-brnoCeitec04_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-brnoCeitec04/anat/{sub-brnoCeitec04_space-other_T2w_label-discs_dlabel.nii.gz => sub-brnoCeitec04_T2w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-brnoCeitec04/anat/sub-brnoCeitec04_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-brnoCeitec04/anat/{sub-brnoCeitec04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-brnoCeitec04_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-brnoCeitec04/anat/sub-brnoCeitec04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-brnoCeitec04/anat/sub-brnoCeitec04_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-brnoCeitec04/anat/{sub-brnoCeitec04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-brnoCeitec04_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-brnoCeitec04/anat/sub-brnoCeitec04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json delete mode 100644 derivatives/labels/sub-brnoCeitec04/anat/sub-brnoCeitec04_space-other_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-brnoCeitec05/anat/{sub-brnoCeitec05_space-other_T1w_label-discs_dlabel.json => sub-brnoCeitec05_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-brnoCeitec05/anat/{sub-brnoCeitec05_space-other_T1w_label-discs_dlabel.nii.gz => sub-brnoCeitec05_T1w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-brnoCeitec05/anat/sub-brnoCeitec05_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-brnoCeitec05/anat/{sub-brnoCeitec05_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz => sub-brnoCeitec05_T2star_label-discs_desc-warp_dlabel.nii.gz} (100%) rename derivatives/labels/sub-brnoCeitec05/anat/{sub-brnoCeitec05_space-other_T2w_label-discs_dlabel.json => sub-brnoCeitec05_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-brnoCeitec05/anat/{sub-brnoCeitec05_space-other_T2w_label-discs_dlabel.nii.gz => sub-brnoCeitec05_T2w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-brnoCeitec05/anat/sub-brnoCeitec05_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-brnoCeitec05/anat/{sub-brnoCeitec05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-brnoCeitec05_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-brnoCeitec05/anat/sub-brnoCeitec05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-brnoCeitec05/anat/sub-brnoCeitec05_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-brnoCeitec05/anat/{sub-brnoCeitec05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-brnoCeitec05_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-brnoCeitec05/anat/sub-brnoCeitec05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json delete mode 100644 derivatives/labels/sub-brnoCeitec05/anat/sub-brnoCeitec05_space-other_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-brnoCeitec06/anat/{sub-brnoCeitec06_space-other_T1w_label-discs_dlabel.json => sub-brnoCeitec06_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-brnoCeitec06/anat/{sub-brnoCeitec06_space-other_T1w_label-discs_dlabel.nii.gz => sub-brnoCeitec06_T1w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-brnoCeitec06/anat/sub-brnoCeitec06_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-brnoCeitec06/anat/{sub-brnoCeitec06_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz => sub-brnoCeitec06_T2star_label-discs_desc-warp_dlabel.nii.gz} (100%) rename derivatives/labels/sub-brnoCeitec06/anat/{sub-brnoCeitec06_space-other_T2w_label-discs_dlabel.json => sub-brnoCeitec06_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-brnoCeitec06/anat/{sub-brnoCeitec06_space-other_T2w_label-discs_dlabel.nii.gz => sub-brnoCeitec06_T2w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-brnoCeitec06/anat/sub-brnoCeitec06_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-brnoCeitec06/anat/{sub-brnoCeitec06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-brnoCeitec06_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-brnoCeitec06/anat/sub-brnoCeitec06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-brnoCeitec06/anat/sub-brnoCeitec06_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-brnoCeitec06/anat/{sub-brnoCeitec06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-brnoCeitec06_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-brnoCeitec06/anat/sub-brnoCeitec06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json delete mode 100644 derivatives/labels/sub-brnoCeitec06/anat/sub-brnoCeitec06_space-other_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-brnoUhb01/anat/{sub-brnoUhb01_space-other_T1w_label-discs_dlabel.json => sub-brnoUhb01_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-brnoUhb01/anat/{sub-brnoUhb01_space-other_T1w_label-discs_dlabel.nii.gz => sub-brnoUhb01_T1w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-brnoUhb01/anat/sub-brnoUhb01_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-brnoUhb01/anat/{sub-brnoUhb01_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz => sub-brnoUhb01_T2star_label-discs_desc-warp_dlabel.nii.gz} (100%) rename derivatives/labels/sub-brnoUhb01/anat/{sub-brnoUhb01_space-other_T2w_label-discs_dlabel.json => sub-brnoUhb01_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-brnoUhb01/anat/{sub-brnoUhb01_space-other_T2w_label-discs_dlabel.nii.gz => sub-brnoUhb01_T2w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-brnoUhb01/anat/sub-brnoUhb01_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-brnoUhb01/anat/{sub-brnoUhb01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-brnoUhb01_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-brnoUhb01/anat/sub-brnoUhb01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-brnoUhb01/anat/sub-brnoUhb01_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-brnoUhb01/anat/{sub-brnoUhb01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-brnoUhb01_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-brnoUhb01/anat/sub-brnoUhb01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json delete mode 100644 derivatives/labels/sub-brnoUhb01/anat/sub-brnoUhb01_space-other_T1w_RPI_r_labels-manual.json create mode 100644 derivatives/labels/sub-brnoUhb01/anat/sub-brnoUhb01_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.json rename derivatives/labels/sub-brnoUhb01/anat/{sub-brnoUhb01_space-other_T1w_RPI_r_labels-manual.nii.gz => sub-brnoUhb01_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-brnoUhb01/anat/sub-brnoUhb01_space-other_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-brnoUhb02/anat/{sub-brnoUhb02_space-other_T1w_label-discs_dlabel.json => sub-brnoUhb02_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-brnoUhb02/anat/{sub-brnoUhb02_space-other_T1w_label-discs_dlabel.nii.gz => sub-brnoUhb02_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-brnoUhb02/anat/{sub-brnoUhb02_space-other_T2w_label-discs_dlabel.json => sub-brnoUhb02_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-brnoUhb02/anat/{sub-brnoUhb02_space-other_T2w_label-discs_dlabel.nii.gz => sub-brnoUhb02_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-brnoUhb03/anat/{sub-brnoUhb03_space-other_T1w_label-discs_dlabel.json => sub-brnoUhb03_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-brnoUhb03/anat/{sub-brnoUhb03_space-other_T1w_label-discs_dlabel.nii.gz => sub-brnoUhb03_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-brnoUhb03/anat/{sub-brnoUhb03_space-other_T2w_label-discs_dlabel.json => sub-brnoUhb03_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-brnoUhb03/anat/{sub-brnoUhb03_space-other_T2w_label-discs_dlabel.nii.gz => sub-brnoUhb03_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-brnoUhb04/anat/{sub-brnoUhb04_space-other_T1w_label-discs_dlabel.json => sub-brnoUhb04_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-brnoUhb04/anat/{sub-brnoUhb04_space-other_T1w_label-discs_dlabel.nii.gz => sub-brnoUhb04_T1w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-brnoUhb04/anat/sub-brnoUhb04_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-brnoUhb04/anat/{sub-brnoUhb04_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz => sub-brnoUhb04_T2star_label-discs_desc-warp_dlabel.nii.gz} (100%) rename derivatives/labels/sub-brnoUhb04/anat/{sub-brnoUhb04_space-other_T2w_label-discs_dlabel.json => sub-brnoUhb04_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-brnoUhb04/anat/{sub-brnoUhb04_space-other_T2w_label-discs_dlabel.nii.gz => sub-brnoUhb04_T2w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-brnoUhb04/anat/sub-brnoUhb04_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-brnoUhb04/anat/{sub-brnoUhb04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-brnoUhb04_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-brnoUhb04/anat/sub-brnoUhb04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-brnoUhb04/anat/sub-brnoUhb04_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-brnoUhb04/anat/{sub-brnoUhb04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-brnoUhb04_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-brnoUhb04/anat/sub-brnoUhb04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json delete mode 100644 derivatives/labels/sub-brnoUhb04/anat/sub-brnoUhb04_space-other_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-brnoUhb05/anat/{sub-brnoUhb05_space-other_T1w_label-discs_dlabel.json => sub-brnoUhb05_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-brnoUhb05/anat/{sub-brnoUhb05_space-other_T1w_label-discs_dlabel.nii.gz => sub-brnoUhb05_T1w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-brnoUhb05/anat/sub-brnoUhb05_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-brnoUhb05/anat/{sub-brnoUhb05_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz => sub-brnoUhb05_T2star_label-discs_desc-warp_dlabel.nii.gz} (100%) rename derivatives/labels/sub-brnoUhb05/anat/{sub-brnoUhb05_space-other_T2w_label-discs_dlabel.json => sub-brnoUhb05_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-brnoUhb05/anat/{sub-brnoUhb05_space-other_T2w_label-discs_dlabel.nii.gz => sub-brnoUhb05_T2w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-brnoUhb05/anat/sub-brnoUhb05_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-brnoUhb05/anat/{sub-brnoUhb05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-brnoUhb05_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-brnoUhb05/anat/sub-brnoUhb05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-brnoUhb05/anat/sub-brnoUhb05_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-brnoUhb05/anat/{sub-brnoUhb05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-brnoUhb05_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-brnoUhb05/anat/sub-brnoUhb05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json delete mode 100644 derivatives/labels/sub-brnoUhb05/anat/sub-brnoUhb05_space-other_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-brnoUhb06/anat/{sub-brnoUhb06_space-other_T1w_label-discs_dlabel.json => sub-brnoUhb06_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-brnoUhb06/anat/{sub-brnoUhb06_space-other_T1w_label-discs_dlabel.nii.gz => sub-brnoUhb06_T1w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-brnoUhb06/anat/sub-brnoUhb06_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-brnoUhb06/anat/{sub-brnoUhb06_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz => sub-brnoUhb06_T2star_label-discs_desc-warp_dlabel.nii.gz} (100%) rename derivatives/labels/sub-brnoUhb06/anat/{sub-brnoUhb06_space-other_T2w_label-discs_dlabel.json => sub-brnoUhb06_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-brnoUhb06/anat/{sub-brnoUhb06_space-other_T2w_label-discs_dlabel.nii.gz => sub-brnoUhb06_T2w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-brnoUhb06/anat/sub-brnoUhb06_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-brnoUhb06/anat/{sub-brnoUhb06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-brnoUhb06_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-brnoUhb06/anat/sub-brnoUhb06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-brnoUhb06/anat/sub-brnoUhb06_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-brnoUhb06/anat/{sub-brnoUhb06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-brnoUhb06_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-brnoUhb06/anat/sub-brnoUhb06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json delete mode 100644 derivatives/labels/sub-brnoUhb06/anat/sub-brnoUhb06_space-other_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-brnoUhb07/anat/{sub-brnoUhb07_space-other_T1w_label-discs_dlabel.json => sub-brnoUhb07_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-brnoUhb07/anat/{sub-brnoUhb07_space-other_T1w_label-discs_dlabel.nii.gz => sub-brnoUhb07_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-brnoUhb07/anat/{sub-brnoUhb07_space-other_T2w_label-discs_dlabel.json => sub-brnoUhb07_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-brnoUhb07/anat/{sub-brnoUhb07_space-other_T2w_label-discs_dlabel.nii.gz => sub-brnoUhb07_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-brnoUhb08/anat/{sub-brnoUhb08_space-other_T1w_label-discs_dlabel.json => sub-brnoUhb08_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-brnoUhb08/anat/{sub-brnoUhb08_space-other_T1w_label-discs_dlabel.nii.gz => sub-brnoUhb08_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-brnoUhb08/anat/{sub-brnoUhb08_space-other_T2w_label-discs_dlabel.json => sub-brnoUhb08_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-brnoUhb08/anat/{sub-brnoUhb08_space-other_T2w_label-discs_dlabel.nii.gz => sub-brnoUhb08_T2w_label-discs_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-brnoUhb08/anat/sub-brnoUhb08_space-other_T1w_RPI_r_labels-manual.json create mode 100644 derivatives/labels/sub-brnoUhb08/anat/sub-brnoUhb08_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.json rename derivatives/labels/sub-brnoUhb08/anat/{sub-brnoUhb08_space-other_T1w_RPI_r_labels-manual.nii.gz => sub-brnoUhb08_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.nii.gz} (100%) rename derivatives/labels/sub-cardiff01/anat/{sub-cardiff01_space-other_T1w_label-discs_dlabel.json => sub-cardiff01_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-cardiff01/anat/{sub-cardiff01_space-other_T1w_label-discs_dlabel.nii.gz => sub-cardiff01_T1w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-cardiff01/anat/sub-cardiff01_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-cardiff01/anat/{sub-cardiff01_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz => sub-cardiff01_T2star_label-discs_desc-warp_dlabel.nii.gz} (100%) rename derivatives/labels/sub-cardiff01/anat/{sub-cardiff01_space-other_T2w_label-discs_dlabel.json => sub-cardiff01_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-cardiff01/anat/{sub-cardiff01_space-other_T2w_label-discs_dlabel.nii.gz => sub-cardiff01_T2w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-cardiff01/anat/sub-cardiff01_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-cardiff01/anat/{sub-cardiff01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-cardiff01_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-cardiff01/anat/sub-cardiff01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-cardiff01/anat/sub-cardiff01_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-cardiff01/anat/{sub-cardiff01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-cardiff01_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-cardiff01/anat/sub-cardiff01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json delete mode 100644 derivatives/labels/sub-cardiff01/anat/sub-cardiff01_space-other_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-cardiff02/anat/{sub-cardiff02_space-other_T1w_label-discs_dlabel.json => sub-cardiff02_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-cardiff02/anat/{sub-cardiff02_space-other_T1w_label-discs_dlabel.nii.gz => sub-cardiff02_T1w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-cardiff02/anat/sub-cardiff02_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-cardiff02/anat/{sub-cardiff02_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz => sub-cardiff02_T2star_label-discs_desc-warp_dlabel.nii.gz} (100%) rename derivatives/labels/sub-cardiff02/anat/{sub-cardiff02_space-other_T2w_label-discs_dlabel.json => sub-cardiff02_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-cardiff02/anat/{sub-cardiff02_space-other_T2w_label-discs_dlabel.nii.gz => sub-cardiff02_T2w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-cardiff02/anat/sub-cardiff02_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-cardiff02/anat/{sub-cardiff02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-cardiff02_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-cardiff02/anat/sub-cardiff02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-cardiff02/anat/sub-cardiff02_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-cardiff02/anat/{sub-cardiff02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-cardiff02_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-cardiff02/anat/sub-cardiff02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json delete mode 100644 derivatives/labels/sub-cardiff02/anat/sub-cardiff02_space-other_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-cardiff03/anat/{sub-cardiff03_space-other_T1w_label-discs_dlabel.json => sub-cardiff03_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-cardiff03/anat/{sub-cardiff03_space-other_T1w_label-discs_dlabel.nii.gz => sub-cardiff03_T1w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-cardiff03/anat/sub-cardiff03_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-cardiff03/anat/{sub-cardiff03_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz => sub-cardiff03_T2star_label-discs_desc-warp_dlabel.nii.gz} (100%) rename derivatives/labels/sub-cardiff03/anat/{sub-cardiff03_space-other_T2w_label-discs_dlabel.json => sub-cardiff03_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-cardiff03/anat/{sub-cardiff03_space-other_T2w_label-discs_dlabel.nii.gz => sub-cardiff03_T2w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-cardiff03/anat/sub-cardiff03_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-cardiff03/anat/{sub-cardiff03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-cardiff03_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-cardiff03/anat/sub-cardiff03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-cardiff03/anat/sub-cardiff03_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-cardiff03/anat/{sub-cardiff03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-cardiff03_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-cardiff03/anat/sub-cardiff03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json delete mode 100644 derivatives/labels/sub-cardiff03/anat/sub-cardiff03_space-other_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-cardiff04/anat/{sub-cardiff04_space-other_T1w_label-discs_dlabel.json => sub-cardiff04_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-cardiff04/anat/{sub-cardiff04_space-other_T1w_label-discs_dlabel.nii.gz => sub-cardiff04_T1w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-cardiff04/anat/sub-cardiff04_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-cardiff04/anat/{sub-cardiff04_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz => sub-cardiff04_T2star_label-discs_desc-warp_dlabel.nii.gz} (100%) rename derivatives/labels/sub-cardiff04/anat/{sub-cardiff04_space-other_T2w_label-discs_dlabel.json => sub-cardiff04_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-cardiff04/anat/{sub-cardiff04_space-other_T2w_label-discs_dlabel.nii.gz => sub-cardiff04_T2w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-cardiff04/anat/sub-cardiff04_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-cardiff04/anat/{sub-cardiff04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-cardiff04_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-cardiff04/anat/sub-cardiff04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-cardiff04/anat/sub-cardiff04_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-cardiff04/anat/{sub-cardiff04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-cardiff04_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-cardiff04/anat/sub-cardiff04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json delete mode 100644 derivatives/labels/sub-cardiff04/anat/sub-cardiff04_space-other_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-cardiff05/anat/{sub-cardiff05_space-other_T1w_label-discs_dlabel.json => sub-cardiff05_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-cardiff05/anat/{sub-cardiff05_space-other_T1w_label-discs_dlabel.nii.gz => sub-cardiff05_T1w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-cardiff05/anat/sub-cardiff05_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-cardiff05/anat/{sub-cardiff05_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz => sub-cardiff05_T2star_label-discs_desc-warp_dlabel.nii.gz} (100%) rename derivatives/labels/sub-cardiff05/anat/{sub-cardiff05_space-other_T2w_label-discs_dlabel.json => sub-cardiff05_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-cardiff05/anat/{sub-cardiff05_space-other_T2w_label-discs_dlabel.nii.gz => sub-cardiff05_T2w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-cardiff05/anat/sub-cardiff05_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-cardiff05/anat/{sub-cardiff05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-cardiff05_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-cardiff05/anat/sub-cardiff05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-cardiff05/anat/sub-cardiff05_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-cardiff05/anat/{sub-cardiff05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-cardiff05_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-cardiff05/anat/sub-cardiff05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-cardiff05/anat/sub-cardiff05_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.json rename derivatives/labels/sub-cardiff05/anat/{sub-cardiff05_space-other_T1w_RPI_r_labels-manual.nii.gz => sub-cardiff05_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-cardiff05/anat/sub-cardiff05_space-other_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-cardiff06/anat/{sub-cardiff06_space-other_T1w_label-discs_dlabel.json => sub-cardiff06_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-cardiff06/anat/{sub-cardiff06_space-other_T1w_label-discs_dlabel.nii.gz => sub-cardiff06_T1w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-cardiff06/anat/sub-cardiff06_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-cardiff06/anat/{sub-cardiff06_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz => sub-cardiff06_T2star_label-discs_desc-warp_dlabel.nii.gz} (100%) rename derivatives/labels/sub-cardiff06/anat/{sub-cardiff06_space-other_T2w_label-discs_dlabel.json => sub-cardiff06_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-cardiff06/anat/{sub-cardiff06_space-other_T2w_label-discs_dlabel.nii.gz => sub-cardiff06_T2w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-cardiff06/anat/sub-cardiff06_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-cardiff06/anat/{sub-cardiff06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-cardiff06_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-cardiff06/anat/sub-cardiff06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-cardiff06/anat/sub-cardiff06_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-cardiff06/anat/{sub-cardiff06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-cardiff06_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-cardiff06/anat/sub-cardiff06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json delete mode 100644 derivatives/labels/sub-cardiff06/anat/sub-cardiff06_space-other_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-cmrra01/anat/{sub-cmrra01_space-other_T1w_label-discs_dlabel.json => sub-cmrra01_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-cmrra01/anat/{sub-cmrra01_space-other_T1w_label-discs_dlabel.nii.gz => sub-cmrra01_T1w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-cmrra01/anat/sub-cmrra01_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-cmrra01/anat/{sub-cmrra01_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz => sub-cmrra01_T2star_label-discs_desc-warp_dlabel.nii.gz} (100%) rename derivatives/labels/sub-cmrra01/anat/{sub-cmrra01_space-other_T2w_label-discs_dlabel.json => sub-cmrra01_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-cmrra01/anat/{sub-cmrra01_space-other_T2w_label-discs_dlabel.nii.gz => sub-cmrra01_T2w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-cmrra01/anat/sub-cmrra01_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-cmrra01/anat/{sub-cmrra01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-cmrra01_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-cmrra01/anat/sub-cmrra01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-cmrra01/anat/sub-cmrra01_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-cmrra01/anat/{sub-cmrra01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-cmrra01_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-cmrra01/anat/sub-cmrra01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json delete mode 100644 derivatives/labels/sub-cmrra01/anat/sub-cmrra01_space-other_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-cmrra02/anat/{sub-cmrra02_space-other_T1w_label-discs_dlabel.json => sub-cmrra02_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-cmrra02/anat/{sub-cmrra02_space-other_T1w_label-discs_dlabel.nii.gz => sub-cmrra02_T1w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-cmrra02/anat/sub-cmrra02_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-cmrra02/anat/{sub-cmrra02_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz => sub-cmrra02_T2star_label-discs_desc-warp_dlabel.nii.gz} (100%) rename derivatives/labels/sub-cmrra02/anat/{sub-cmrra02_space-other_T2w_label-discs_dlabel.json => sub-cmrra02_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-cmrra02/anat/{sub-cmrra02_space-other_T2w_label-discs_dlabel.nii.gz => sub-cmrra02_T2w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-cmrra02/anat/sub-cmrra02_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-cmrra02/anat/{sub-cmrra02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-cmrra02_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-cmrra02/anat/sub-cmrra02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-cmrra02/anat/sub-cmrra02_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-cmrra02/anat/{sub-cmrra02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-cmrra02_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-cmrra02/anat/sub-cmrra02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json delete mode 100644 derivatives/labels/sub-cmrra02/anat/sub-cmrra02_space-other_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-cmrra03/anat/{sub-cmrra03_space-other_T1w_label-discs_dlabel.json => sub-cmrra03_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-cmrra03/anat/{sub-cmrra03_space-other_T1w_label-discs_dlabel.nii.gz => sub-cmrra03_T1w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-cmrra03/anat/sub-cmrra03_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-cmrra03/anat/{sub-cmrra03_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz => sub-cmrra03_T2star_label-discs_desc-warp_dlabel.nii.gz} (100%) rename derivatives/labels/sub-cmrra03/anat/{sub-cmrra03_space-other_T2w_label-discs_dlabel.json => sub-cmrra03_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-cmrra03/anat/{sub-cmrra03_space-other_T2w_label-discs_dlabel.nii.gz => sub-cmrra03_T2w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-cmrra03/anat/sub-cmrra03_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-cmrra03/anat/{sub-cmrra03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-cmrra03_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-cmrra03/anat/sub-cmrra03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-cmrra03/anat/sub-cmrra03_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-cmrra03/anat/{sub-cmrra03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-cmrra03_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-cmrra03/anat/sub-cmrra03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json delete mode 100644 derivatives/labels/sub-cmrra03/anat/sub-cmrra03_space-other_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-cmrra04/anat/{sub-cmrra04_space-other_T1w_label-discs_dlabel.json => sub-cmrra04_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-cmrra04/anat/{sub-cmrra04_space-other_T1w_label-discs_dlabel.nii.gz => sub-cmrra04_T1w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-cmrra04/anat/sub-cmrra04_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-cmrra04/anat/{sub-cmrra04_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz => sub-cmrra04_T2star_label-discs_desc-warp_dlabel.nii.gz} (100%) rename derivatives/labels/sub-cmrra04/anat/{sub-cmrra04_space-other_T2w_label-discs_dlabel.json => sub-cmrra04_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-cmrra04/anat/{sub-cmrra04_space-other_T2w_label-discs_dlabel.nii.gz => sub-cmrra04_T2w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-cmrra04/anat/sub-cmrra04_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-cmrra04/anat/{sub-cmrra04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-cmrra04_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-cmrra04/anat/sub-cmrra04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-cmrra04/anat/sub-cmrra04_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-cmrra04/anat/{sub-cmrra04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-cmrra04_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-cmrra04/anat/sub-cmrra04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json delete mode 100644 derivatives/labels/sub-cmrra04/anat/sub-cmrra04_space-other_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-cmrra05/anat/{sub-cmrra05_space-other_T1w_label-discs_dlabel.json => sub-cmrra05_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-cmrra05/anat/{sub-cmrra05_space-other_T1w_label-discs_dlabel.nii.gz => sub-cmrra05_T1w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-cmrra05/anat/sub-cmrra05_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-cmrra05/anat/{sub-cmrra05_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz => sub-cmrra05_T2star_label-discs_desc-warp_dlabel.nii.gz} (100%) rename derivatives/labels/sub-cmrra05/anat/{sub-cmrra05_space-other_T2w_label-discs_dlabel.json => sub-cmrra05_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-cmrra05/anat/{sub-cmrra05_space-other_T2w_label-discs_dlabel.nii.gz => sub-cmrra05_T2w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-cmrra05/anat/sub-cmrra05_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-cmrra05/anat/{sub-cmrra05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-cmrra05_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-cmrra05/anat/sub-cmrra05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-cmrra05/anat/sub-cmrra05_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json rename 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derivatives/labels/sub-cmrrb06/anat/{sub-cmrrb06_space-other_T2w_label-discs_dlabel.nii.gz => sub-cmrrb06_T2w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-cmrrb06/anat/sub-cmrrb06_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-cmrrb06/anat/{sub-cmrrb06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-cmrrb06_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-cmrrb06/anat/sub-cmrrb06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-cmrrb06/anat/sub-cmrrb06_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-cmrrb06/anat/{sub-cmrrb06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-cmrrb06_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 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derivatives/labels/sub-cmrrb07/anat/{sub-cmrrb07_space-other_T2w_label-discs_dlabel.nii.gz => sub-cmrrb07_T2w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-cmrrb07/anat/sub-cmrrb07_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-cmrrb07/anat/{sub-cmrrb07_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-cmrrb07_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-cmrrb07/anat/sub-cmrrb07_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-cmrrb07/anat/sub-cmrrb07_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-cmrrb07/anat/{sub-cmrrb07_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-cmrrb07_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-cmrrb07/anat/sub-cmrrb07_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json delete mode 100644 derivatives/labels/sub-cmrrb07/anat/sub-cmrrb07_space-other_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-dresden01/anat/{sub-dresden01_space-other_T1w_label-discs_dlabel.json => sub-dresden01_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-dresden01/anat/{sub-dresden01_space-other_T1w_label-discs_dlabel.nii.gz => sub-dresden01_T1w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-dresden01/anat/sub-dresden01_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-dresden01/anat/{sub-dresden01_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz => sub-dresden01_T2star_label-discs_desc-warp_dlabel.nii.gz} (100%) rename derivatives/labels/sub-dresden01/anat/{sub-dresden01_space-other_T2w_label-discs_dlabel.json => sub-dresden01_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-dresden01/anat/{sub-dresden01_space-other_T2w_label-discs_dlabel.nii.gz => sub-dresden01_T2w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-dresden01/anat/sub-dresden01_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-dresden01/anat/{sub-dresden01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-dresden01_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-dresden01/anat/sub-dresden01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-dresden01/anat/sub-dresden01_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-dresden01/anat/{sub-dresden01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-dresden01_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-dresden01/anat/sub-dresden01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json delete mode 100644 derivatives/labels/sub-dresden01/anat/sub-dresden01_space-other_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-dresden02/anat/{sub-dresden02_space-other_T1w_label-discs_dlabel.json => sub-dresden02_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-dresden02/anat/{sub-dresden02_space-other_T1w_label-discs_dlabel.nii.gz => sub-dresden02_T1w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-dresden02/anat/sub-dresden02_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-dresden02/anat/{sub-dresden02_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz => sub-dresden02_T2star_label-discs_desc-warp_dlabel.nii.gz} (100%) rename derivatives/labels/sub-dresden02/anat/{sub-dresden02_space-other_T2w_label-discs_dlabel.json => sub-dresden02_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-dresden02/anat/{sub-dresden02_space-other_T2w_label-discs_dlabel.nii.gz => sub-dresden02_T2w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-dresden02/anat/sub-dresden02_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-dresden02/anat/{sub-dresden02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-dresden02_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-dresden02/anat/sub-dresden02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-dresden02/anat/sub-dresden02_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-dresden02/anat/{sub-dresden02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-dresden02_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-dresden02/anat/sub-dresden02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json delete mode 100644 derivatives/labels/sub-dresden02/anat/sub-dresden02_space-other_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-fslAchieva01/anat/{sub-fslAchieva01_space-other_T1w_label-discs_dlabel.json => sub-fslAchieva01_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-fslAchieva01/anat/{sub-fslAchieva01_space-other_T1w_label-discs_dlabel.nii.gz => sub-fslAchieva01_T1w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-fslAchieva01/anat/sub-fslAchieva01_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-fslAchieva01/anat/{sub-fslAchieva01_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz => sub-fslAchieva01_T2star_label-discs_desc-warp_dlabel.nii.gz} (100%) rename derivatives/labels/sub-fslAchieva01/anat/{sub-fslAchieva01_space-other_T2w_label-discs_dlabel.json => sub-fslAchieva01_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-fslAchieva01/anat/{sub-fslAchieva01_space-other_T2w_label-discs_dlabel.nii.gz => sub-fslAchieva01_T2w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-fslAchieva01/anat/sub-fslAchieva01_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-fslAchieva01/anat/{sub-fslAchieva01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-fslAchieva01_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-fslAchieva01/anat/sub-fslAchieva01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-fslAchieva01/anat/sub-fslAchieva01_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-fslAchieva01/anat/{sub-fslAchieva01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-fslAchieva01_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-fslAchieva01/anat/sub-fslAchieva01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-fslAchieva01/anat/sub-fslAchieva01_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.json rename derivatives/labels/sub-fslAchieva01/anat/{sub-fslAchieva01_space-other_T1w_RPI_r_labels-manual.nii.gz => sub-fslAchieva01_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-fslAchieva01/anat/sub-fslAchieva01_space-other_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-fslAchieva02/anat/{sub-fslAchieva02_space-other_T1w_label-discs_dlabel.json => sub-fslAchieva02_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-fslAchieva02/anat/{sub-fslAchieva02_space-other_T1w_label-discs_dlabel.nii.gz => sub-fslAchieva02_T1w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-fslAchieva02/anat/sub-fslAchieva02_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-fslAchieva02/anat/{sub-fslAchieva02_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz => sub-fslAchieva02_T2star_label-discs_desc-warp_dlabel.nii.gz} (100%) rename derivatives/labels/sub-fslAchieva02/anat/{sub-fslAchieva02_space-other_T2w_label-discs_dlabel.json => sub-fslAchieva02_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-fslAchieva02/anat/{sub-fslAchieva02_space-other_T2w_label-discs_dlabel.nii.gz => sub-fslAchieva02_T2w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-fslAchieva02/anat/sub-fslAchieva02_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-fslAchieva02/anat/{sub-fslAchieva02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-fslAchieva02_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-fslAchieva02/anat/sub-fslAchieva02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-fslAchieva02/anat/sub-fslAchieva02_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-fslAchieva02/anat/{sub-fslAchieva02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-fslAchieva02_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-fslAchieva02/anat/sub-fslAchieva02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json delete mode 100644 derivatives/labels/sub-fslAchieva02/anat/sub-fslAchieva02_space-other_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-fslAchieva03/anat/{sub-fslAchieva03_space-other_T1w_label-discs_dlabel.json => sub-fslAchieva03_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-fslAchieva03/anat/{sub-fslAchieva03_space-other_T1w_label-discs_dlabel.nii.gz => sub-fslAchieva03_T1w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-fslAchieva03/anat/sub-fslAchieva03_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-fslAchieva03/anat/{sub-fslAchieva03_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz => sub-fslAchieva03_T2star_label-discs_desc-warp_dlabel.nii.gz} (100%) rename derivatives/labels/sub-fslAchieva03/anat/{sub-fslAchieva03_space-other_T2w_label-discs_dlabel.json => sub-fslAchieva03_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-fslAchieva03/anat/{sub-fslAchieva03_space-other_T2w_label-discs_dlabel.nii.gz => sub-fslAchieva03_T2w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-fslAchieva03/anat/sub-fslAchieva03_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-fslAchieva03/anat/{sub-fslAchieva03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-fslAchieva03_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-fslAchieva03/anat/sub-fslAchieva03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-fslAchieva03/anat/sub-fslAchieva03_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-fslAchieva03/anat/{sub-fslAchieva03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-fslAchieva03_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-fslAchieva03/anat/sub-fslAchieva03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json delete mode 100644 derivatives/labels/sub-fslAchieva03/anat/sub-fslAchieva03_space-other_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-fslAchieva04/anat/{sub-fslAchieva04_space-other_T1w_label-discs_dlabel.json => sub-fslAchieva04_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-fslAchieva04/anat/{sub-fslAchieva04_space-other_T1w_label-discs_dlabel.nii.gz => sub-fslAchieva04_T1w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-fslAchieva04/anat/sub-fslAchieva04_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-fslAchieva04/anat/{sub-fslAchieva04_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz => sub-fslAchieva04_T2star_label-discs_desc-warp_dlabel.nii.gz} (100%) rename derivatives/labels/sub-fslAchieva04/anat/{sub-fslAchieva04_space-other_T2w_label-discs_dlabel.json => sub-fslAchieva04_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-fslAchieva04/anat/{sub-fslAchieva04_space-other_T2w_label-discs_dlabel.nii.gz => sub-fslAchieva04_T2w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-fslAchieva04/anat/sub-fslAchieva04_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-fslAchieva04/anat/{sub-fslAchieva04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-fslAchieva04_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-fslAchieva04/anat/sub-fslAchieva04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-fslAchieva04/anat/sub-fslAchieva04_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-fslAchieva04/anat/{sub-fslAchieva04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-fslAchieva04_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-fslAchieva04/anat/sub-fslAchieva04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json delete mode 100644 derivatives/labels/sub-fslAchieva04/anat/sub-fslAchieva04_space-other_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-fslAchieva05/anat/{sub-fslAchieva05_space-other_T1w_label-discs_dlabel.json => sub-fslAchieva05_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-fslAchieva05/anat/{sub-fslAchieva05_space-other_T1w_label-discs_dlabel.nii.gz => sub-fslAchieva05_T1w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-fslAchieva05/anat/sub-fslAchieva05_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-fslAchieva05/anat/{sub-fslAchieva05_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz => sub-fslAchieva05_T2star_label-discs_desc-warp_dlabel.nii.gz} (100%) rename derivatives/labels/sub-fslAchieva05/anat/{sub-fslAchieva05_space-other_T2w_label-discs_dlabel.json => sub-fslAchieva05_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-fslAchieva05/anat/{sub-fslAchieva05_space-other_T2w_label-discs_dlabel.nii.gz => sub-fslAchieva05_T2w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-fslAchieva05/anat/sub-fslAchieva05_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-fslAchieva05/anat/{sub-fslAchieva05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-fslAchieva05_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-fslAchieva05/anat/sub-fslAchieva05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-fslAchieva05/anat/sub-fslAchieva05_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-fslAchieva05/anat/{sub-fslAchieva05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-fslAchieva05_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-fslAchieva05/anat/sub-fslAchieva05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json delete mode 100644 derivatives/labels/sub-fslAchieva05/anat/sub-fslAchieva05_space-other_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-fslAchieva06/anat/{sub-fslAchieva06_space-other_T1w_label-discs_dlabel.json => sub-fslAchieva06_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-fslAchieva06/anat/{sub-fslAchieva06_space-other_T1w_label-discs_dlabel.nii.gz => sub-fslAchieva06_T1w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-fslAchieva06/anat/sub-fslAchieva06_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-fslAchieva06/anat/{sub-fslAchieva06_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz => sub-fslAchieva06_T2star_label-discs_desc-warp_dlabel.nii.gz} (100%) rename derivatives/labels/sub-fslAchieva06/anat/{sub-fslAchieva06_space-other_T2w_label-discs_dlabel.json => sub-fslAchieva06_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-fslAchieva06/anat/{sub-fslAchieva06_space-other_T2w_label-discs_dlabel.nii.gz => sub-fslAchieva06_T2w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-fslAchieva06/anat/sub-fslAchieva06_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-fslAchieva06/anat/{sub-fslAchieva06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-fslAchieva06_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-fslAchieva06/anat/sub-fslAchieva06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-fslAchieva06/anat/sub-fslAchieva06_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-fslAchieva06/anat/{sub-fslAchieva06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-fslAchieva06_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-fslAchieva06/anat/sub-fslAchieva06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json delete mode 100644 derivatives/labels/sub-fslAchieva06/anat/sub-fslAchieva06_space-other_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-fslPrisma01/anat/{sub-fslPrisma01_space-other_T1w_label-discs_dlabel.json => sub-fslPrisma01_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-fslPrisma01/anat/{sub-fslPrisma01_space-other_T1w_label-discs_dlabel.nii.gz => sub-fslPrisma01_T1w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-fslPrisma01/anat/sub-fslPrisma01_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-fslPrisma01/anat/{sub-fslPrisma01_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz => sub-fslPrisma01_T2star_label-discs_desc-warp_dlabel.nii.gz} (100%) rename derivatives/labels/sub-fslPrisma01/anat/{sub-fslPrisma01_space-other_T2w_label-discs_dlabel.json => sub-fslPrisma01_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-fslPrisma01/anat/{sub-fslPrisma01_space-other_T2w_label-discs_dlabel.nii.gz => sub-fslPrisma01_T2w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-fslPrisma01/anat/sub-fslPrisma01_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-fslPrisma01/anat/{sub-fslPrisma01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-fslPrisma01_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-fslPrisma01/anat/sub-fslPrisma01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-fslPrisma01/anat/sub-fslPrisma01_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-fslPrisma01/anat/{sub-fslPrisma01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-fslPrisma01_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-fslPrisma01/anat/sub-fslPrisma01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json delete mode 100644 derivatives/labels/sub-fslPrisma01/anat/sub-fslPrisma01_space-other_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-fslPrisma02/anat/{sub-fslPrisma02_space-other_T1w_label-discs_dlabel.json => sub-fslPrisma02_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-fslPrisma02/anat/{sub-fslPrisma02_space-other_T1w_label-discs_dlabel.nii.gz => sub-fslPrisma02_T1w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-fslPrisma02/anat/sub-fslPrisma02_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-fslPrisma02/anat/{sub-fslPrisma02_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz => sub-fslPrisma02_T2star_label-discs_desc-warp_dlabel.nii.gz} (100%) rename derivatives/labels/sub-fslPrisma02/anat/{sub-fslPrisma02_space-other_T2w_label-discs_dlabel.json => sub-fslPrisma02_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-fslPrisma02/anat/{sub-fslPrisma02_space-other_T2w_label-discs_dlabel.nii.gz => sub-fslPrisma02_T2w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-fslPrisma02/anat/sub-fslPrisma02_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-fslPrisma02/anat/{sub-fslPrisma02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-fslPrisma02_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-fslPrisma02/anat/sub-fslPrisma02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-fslPrisma02/anat/sub-fslPrisma02_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-fslPrisma02/anat/{sub-fslPrisma02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-fslPrisma02_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-fslPrisma02/anat/sub-fslPrisma02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json delete mode 100644 derivatives/labels/sub-fslPrisma02/anat/sub-fslPrisma02_space-other_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-fslPrisma03/anat/{sub-fslPrisma03_space-other_T1w_label-discs_dlabel.json => sub-fslPrisma03_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-fslPrisma03/anat/{sub-fslPrisma03_space-other_T1w_label-discs_dlabel.nii.gz => sub-fslPrisma03_T1w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-fslPrisma03/anat/sub-fslPrisma03_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-fslPrisma03/anat/{sub-fslPrisma03_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz => sub-fslPrisma03_T2star_label-discs_desc-warp_dlabel.nii.gz} (100%) rename derivatives/labels/sub-fslPrisma03/anat/{sub-fslPrisma03_space-other_T2w_label-discs_dlabel.json => sub-fslPrisma03_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-fslPrisma03/anat/{sub-fslPrisma03_space-other_T2w_label-discs_dlabel.nii.gz => sub-fslPrisma03_T2w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-fslPrisma03/anat/sub-fslPrisma03_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-fslPrisma03/anat/{sub-fslPrisma03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-fslPrisma03_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-fslPrisma03/anat/sub-fslPrisma03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-fslPrisma03/anat/sub-fslPrisma03_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-fslPrisma03/anat/{sub-fslPrisma03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-fslPrisma03_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-fslPrisma03/anat/sub-fslPrisma03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json delete mode 100644 derivatives/labels/sub-fslPrisma03/anat/sub-fslPrisma03_space-other_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-fslPrisma04/anat/{sub-fslPrisma04_space-other_T1w_label-discs_dlabel.json => sub-fslPrisma04_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-fslPrisma04/anat/{sub-fslPrisma04_space-other_T1w_label-discs_dlabel.nii.gz => sub-fslPrisma04_T1w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-fslPrisma04/anat/sub-fslPrisma04_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-fslPrisma04/anat/{sub-fslPrisma04_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz => sub-fslPrisma04_T2star_label-discs_desc-warp_dlabel.nii.gz} (100%) rename derivatives/labels/sub-fslPrisma04/anat/{sub-fslPrisma04_space-other_T2w_label-discs_dlabel.json => sub-fslPrisma04_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-fslPrisma04/anat/{sub-fslPrisma04_space-other_T2w_label-discs_dlabel.nii.gz => sub-fslPrisma04_T2w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-fslPrisma04/anat/sub-fslPrisma04_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-fslPrisma04/anat/{sub-fslPrisma04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-fslPrisma04_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-fslPrisma04/anat/sub-fslPrisma04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-fslPrisma04/anat/sub-fslPrisma04_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-fslPrisma04/anat/{sub-fslPrisma04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-fslPrisma04_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-fslPrisma04/anat/sub-fslPrisma04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json delete mode 100644 derivatives/labels/sub-fslPrisma04/anat/sub-fslPrisma04_space-other_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-fslPrisma05/anat/{sub-fslPrisma05_space-other_T1w_label-discs_dlabel.json => sub-fslPrisma05_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-fslPrisma05/anat/{sub-fslPrisma05_space-other_T1w_label-discs_dlabel.nii.gz => sub-fslPrisma05_T1w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-fslPrisma05/anat/sub-fslPrisma05_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-fslPrisma05/anat/{sub-fslPrisma05_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz => sub-fslPrisma05_T2star_label-discs_desc-warp_dlabel.nii.gz} (100%) rename derivatives/labels/sub-fslPrisma05/anat/{sub-fslPrisma05_space-other_T2w_label-discs_dlabel.json => sub-fslPrisma05_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-fslPrisma05/anat/{sub-fslPrisma05_space-other_T2w_label-discs_dlabel.nii.gz => sub-fslPrisma05_T2w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-fslPrisma05/anat/sub-fslPrisma05_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-fslPrisma05/anat/{sub-fslPrisma05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-fslPrisma05_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-fslPrisma05/anat/sub-fslPrisma05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-fslPrisma05/anat/sub-fslPrisma05_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-fslPrisma05/anat/{sub-fslPrisma05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-fslPrisma05_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-fslPrisma05/anat/sub-fslPrisma05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json delete mode 100644 derivatives/labels/sub-fslPrisma05/anat/sub-fslPrisma05_space-other_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-fslPrisma06/anat/{sub-fslPrisma06_space-other_T1w_label-discs_dlabel.json => sub-fslPrisma06_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-fslPrisma06/anat/{sub-fslPrisma06_space-other_T1w_label-discs_dlabel.nii.gz => sub-fslPrisma06_T1w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-fslPrisma06/anat/sub-fslPrisma06_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-fslPrisma06/anat/{sub-fslPrisma06_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz => sub-fslPrisma06_T2star_label-discs_desc-warp_dlabel.nii.gz} (100%) rename derivatives/labels/sub-fslPrisma06/anat/{sub-fslPrisma06_space-other_T2w_label-discs_dlabel.json => sub-fslPrisma06_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-fslPrisma06/anat/{sub-fslPrisma06_space-other_T2w_label-discs_dlabel.nii.gz => sub-fslPrisma06_T2w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-fslPrisma06/anat/sub-fslPrisma06_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-fslPrisma06/anat/{sub-fslPrisma06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-fslPrisma06_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-fslPrisma06/anat/sub-fslPrisma06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-fslPrisma06/anat/sub-fslPrisma06_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-fslPrisma06/anat/{sub-fslPrisma06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-fslPrisma06_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-fslPrisma06/anat/sub-fslPrisma06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json delete mode 100644 derivatives/labels/sub-fslPrisma06/anat/sub-fslPrisma06_space-other_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-geneva01/anat/{sub-geneva01_space-other_T1w_label-discs_dlabel.json => sub-geneva01_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-geneva01/anat/{sub-geneva01_space-other_T1w_label-discs_dlabel.nii.gz => sub-geneva01_T1w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-geneva01/anat/sub-geneva01_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-geneva01/anat/{sub-geneva01_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz => sub-geneva01_T2star_label-discs_desc-warp_dlabel.nii.gz} (100%) rename derivatives/labels/sub-geneva01/anat/{sub-geneva01_space-other_T2w_label-discs_dlabel.json => sub-geneva01_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-geneva01/anat/{sub-geneva01_space-other_T2w_label-discs_dlabel.nii.gz => sub-geneva01_T2w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-geneva01/anat/sub-geneva01_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-geneva01/anat/{sub-geneva01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-geneva01_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-geneva01/anat/sub-geneva01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-geneva01/anat/sub-geneva01_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-geneva01/anat/{sub-geneva01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-geneva01_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-geneva01/anat/sub-geneva01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json delete mode 100644 derivatives/labels/sub-geneva01/anat/sub-geneva01_space-other_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-geneva02/anat/{sub-geneva02_space-other_T1w_label-discs_dlabel.json => sub-geneva02_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-geneva02/anat/{sub-geneva02_space-other_T1w_label-discs_dlabel.nii.gz => sub-geneva02_T1w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-geneva02/anat/sub-geneva02_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-geneva02/anat/{sub-geneva02_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz => sub-geneva02_T2star_label-discs_desc-warp_dlabel.nii.gz} (100%) rename derivatives/labels/sub-geneva02/anat/{sub-geneva02_space-other_T2w_label-discs_dlabel.json => sub-geneva02_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-geneva02/anat/{sub-geneva02_space-other_T2w_label-discs_dlabel.nii.gz => sub-geneva02_T2w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-geneva02/anat/sub-geneva02_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-geneva02/anat/{sub-geneva02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-geneva02_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-geneva02/anat/sub-geneva02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-geneva02/anat/sub-geneva02_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-geneva02/anat/{sub-geneva02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-geneva02_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-geneva02/anat/sub-geneva02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json delete mode 100644 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create mode 100644 derivatives/labels/sub-geneva03/anat/sub-geneva03_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-geneva03/anat/{sub-geneva03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-geneva03_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-geneva03/anat/sub-geneva03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-geneva03/anat/sub-geneva03_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-geneva03/anat/{sub-geneva03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-geneva03_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-geneva03/anat/sub-geneva03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json delete mode 100644 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sub-hamburg02_T1w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-hamburg02/anat/sub-hamburg02_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-hamburg02/anat/{sub-hamburg02_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz => sub-hamburg02_T2star_label-discs_desc-warp_dlabel.nii.gz} (100%) rename derivatives/labels/sub-hamburg02/anat/{sub-hamburg02_space-other_T2w_label-discs_dlabel.json => sub-hamburg02_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-hamburg02/anat/{sub-hamburg02_space-other_T2w_label-discs_dlabel.nii.gz => sub-hamburg02_T2w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-hamburg02/anat/sub-hamburg02_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-hamburg02/anat/{sub-hamburg02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-hamburg02_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 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sub-hamburg03_T1w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-hamburg03/anat/sub-hamburg03_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-hamburg03/anat/{sub-hamburg03_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz => sub-hamburg03_T2star_label-discs_desc-warp_dlabel.nii.gz} (100%) rename derivatives/labels/sub-hamburg03/anat/{sub-hamburg03_space-other_T2w_label-discs_dlabel.json => sub-hamburg03_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-hamburg03/anat/{sub-hamburg03_space-other_T2w_label-discs_dlabel.nii.gz => sub-hamburg03_T2w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-hamburg03/anat/sub-hamburg03_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-hamburg03/anat/{sub-hamburg03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-hamburg03_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 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sub-hamburg04_T1w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-hamburg04/anat/sub-hamburg04_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-hamburg04/anat/{sub-hamburg04_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz => sub-hamburg04_T2star_label-discs_desc-warp_dlabel.nii.gz} (100%) rename derivatives/labels/sub-hamburg04/anat/{sub-hamburg04_space-other_T2w_label-discs_dlabel.json => sub-hamburg04_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-hamburg04/anat/{sub-hamburg04_space-other_T2w_label-discs_dlabel.nii.gz => sub-hamburg04_T2w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-hamburg04/anat/sub-hamburg04_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-hamburg04/anat/{sub-hamburg04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-hamburg04_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-hamburg04/anat/sub-hamburg04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-hamburg04/anat/sub-hamburg04_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-hamburg04/anat/{sub-hamburg04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-hamburg04_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-hamburg04/anat/sub-hamburg04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json delete mode 100644 derivatives/labels/sub-hamburg04/anat/sub-hamburg04_space-other_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-hamburg05/anat/{sub-hamburg05_space-other_T1w_label-discs_dlabel.json => sub-hamburg05_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-hamburg05/anat/{sub-hamburg05_space-other_T1w_label-discs_dlabel.nii.gz => sub-hamburg05_T1w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-hamburg05/anat/sub-hamburg05_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-hamburg05/anat/{sub-hamburg05_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz => sub-hamburg05_T2star_label-discs_desc-warp_dlabel.nii.gz} (100%) rename derivatives/labels/sub-hamburg05/anat/{sub-hamburg05_space-other_T2w_label-discs_dlabel.json => sub-hamburg05_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-hamburg05/anat/{sub-hamburg05_space-other_T2w_label-discs_dlabel.nii.gz => sub-hamburg05_T2w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-hamburg05/anat/sub-hamburg05_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-hamburg05/anat/{sub-hamburg05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-hamburg05_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-hamburg05/anat/sub-hamburg05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-hamburg05/anat/sub-hamburg05_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-hamburg05/anat/{sub-hamburg05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-hamburg05_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-hamburg05/anat/sub-hamburg05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json delete mode 100644 derivatives/labels/sub-hamburg05/anat/sub-hamburg05_space-other_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-hamburg06/anat/{sub-hamburg06_space-other_T1w_label-discs_dlabel.json => sub-hamburg06_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-hamburg06/anat/{sub-hamburg06_space-other_T1w_label-discs_dlabel.nii.gz => sub-hamburg06_T1w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-hamburg06/anat/sub-hamburg06_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-hamburg06/anat/{sub-hamburg06_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz => sub-hamburg06_T2star_label-discs_desc-warp_dlabel.nii.gz} (100%) rename derivatives/labels/sub-hamburg06/anat/{sub-hamburg06_space-other_T2w_label-discs_dlabel.json => sub-hamburg06_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-hamburg06/anat/{sub-hamburg06_space-other_T2w_label-discs_dlabel.nii.gz => sub-hamburg06_T2w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-hamburg06/anat/sub-hamburg06_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-hamburg06/anat/{sub-hamburg06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-hamburg06_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-hamburg06/anat/sub-hamburg06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-hamburg06/anat/sub-hamburg06_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-hamburg06/anat/{sub-hamburg06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-hamburg06_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-hamburg06/anat/sub-hamburg06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json delete mode 100644 derivatives/labels/sub-hamburg06/anat/sub-hamburg06_space-other_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-juntendo750w01/anat/{sub-juntendo750w01_space-other_T1w_label-discs_dlabel.json => sub-juntendo750w01_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-juntendo750w01/anat/{sub-juntendo750w01_space-other_T1w_label-discs_dlabel.nii.gz => sub-juntendo750w01_T1w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-juntendo750w01/anat/sub-juntendo750w01_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-juntendo750w01/anat/{sub-juntendo750w01_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz => sub-juntendo750w01_T2star_label-discs_desc-warp_dlabel.nii.gz} (100%) rename derivatives/labels/sub-juntendo750w01/anat/{sub-juntendo750w01_space-other_T2w_label-discs_dlabel.json => sub-juntendo750w01_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-juntendo750w01/anat/{sub-juntendo750w01_space-other_T2w_label-discs_dlabel.nii.gz => sub-juntendo750w01_T2w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-juntendo750w01/anat/sub-juntendo750w01_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-juntendo750w01/anat/{sub-juntendo750w01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-juntendo750w01_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-juntendo750w01/anat/sub-juntendo750w01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-juntendo750w01/anat/sub-juntendo750w01_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-juntendo750w01/anat/{sub-juntendo750w01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-juntendo750w01_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-juntendo750w01/anat/sub-juntendo750w01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json delete mode 100644 derivatives/labels/sub-juntendo750w01/anat/sub-juntendo750w01_space-other_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-juntendo750w02/anat/{sub-juntendo750w02_space-other_T1w_label-discs_dlabel.json => sub-juntendo750w02_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-juntendo750w02/anat/{sub-juntendo750w02_space-other_T1w_label-discs_dlabel.nii.gz => sub-juntendo750w02_T1w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-juntendo750w02/anat/sub-juntendo750w02_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-juntendo750w02/anat/{sub-juntendo750w02_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz => sub-juntendo750w02_T2star_label-discs_desc-warp_dlabel.nii.gz} (100%) rename derivatives/labels/sub-juntendo750w02/anat/{sub-juntendo750w02_space-other_T2w_label-discs_dlabel.json => sub-juntendo750w02_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-juntendo750w02/anat/{sub-juntendo750w02_space-other_T2w_label-discs_dlabel.nii.gz => sub-juntendo750w02_T2w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-juntendo750w02/anat/sub-juntendo750w02_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-juntendo750w02/anat/{sub-juntendo750w02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-juntendo750w02_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-juntendo750w02/anat/sub-juntendo750w02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-juntendo750w02/anat/sub-juntendo750w02_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-juntendo750w02/anat/{sub-juntendo750w02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-juntendo750w02_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-juntendo750w02/anat/sub-juntendo750w02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json delete mode 100644 derivatives/labels/sub-juntendo750w02/anat/sub-juntendo750w02_space-other_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-juntendo750w03/anat/{sub-juntendo750w03_space-other_T1w_label-discs_dlabel.json => sub-juntendo750w03_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-juntendo750w03/anat/{sub-juntendo750w03_space-other_T1w_label-discs_dlabel.nii.gz => sub-juntendo750w03_T1w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-juntendo750w03/anat/sub-juntendo750w03_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-juntendo750w03/anat/{sub-juntendo750w03_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz => sub-juntendo750w03_T2star_label-discs_desc-warp_dlabel.nii.gz} (100%) rename derivatives/labels/sub-juntendo750w03/anat/{sub-juntendo750w03_space-other_T2w_label-discs_dlabel.json => sub-juntendo750w03_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-juntendo750w03/anat/{sub-juntendo750w03_space-other_T2w_label-discs_dlabel.nii.gz => sub-juntendo750w03_T2w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-juntendo750w03/anat/sub-juntendo750w03_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-juntendo750w03/anat/{sub-juntendo750w03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-juntendo750w03_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-juntendo750w03/anat/sub-juntendo750w03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-juntendo750w03/anat/sub-juntendo750w03_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-juntendo750w03/anat/{sub-juntendo750w03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-juntendo750w03_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-juntendo750w03/anat/sub-juntendo750w03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json delete mode 100644 derivatives/labels/sub-juntendo750w03/anat/sub-juntendo750w03_space-other_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-juntendo750w04/anat/{sub-juntendo750w04_space-other_T1w_label-discs_dlabel.json => sub-juntendo750w04_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-juntendo750w04/anat/{sub-juntendo750w04_space-other_T1w_label-discs_dlabel.nii.gz => sub-juntendo750w04_T1w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-juntendo750w04/anat/sub-juntendo750w04_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-juntendo750w04/anat/{sub-juntendo750w04_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz => sub-juntendo750w04_T2star_label-discs_desc-warp_dlabel.nii.gz} (100%) rename derivatives/labels/sub-juntendo750w04/anat/{sub-juntendo750w04_space-other_T2w_label-discs_dlabel.json => sub-juntendo750w04_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-juntendo750w04/anat/{sub-juntendo750w04_space-other_T2w_label-discs_dlabel.nii.gz => sub-juntendo750w04_T2w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-juntendo750w04/anat/sub-juntendo750w04_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-juntendo750w04/anat/{sub-juntendo750w04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-juntendo750w04_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-juntendo750w04/anat/sub-juntendo750w04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-juntendo750w04/anat/sub-juntendo750w04_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-juntendo750w04/anat/{sub-juntendo750w04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-juntendo750w04_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-juntendo750w04/anat/sub-juntendo750w04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json delete mode 100644 derivatives/labels/sub-juntendo750w04/anat/sub-juntendo750w04_space-other_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-juntendo750w05/anat/{sub-juntendo750w05_space-other_T1w_label-discs_dlabel.json => sub-juntendo750w05_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-juntendo750w05/anat/{sub-juntendo750w05_space-other_T1w_label-discs_dlabel.nii.gz => sub-juntendo750w05_T1w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-juntendo750w05/anat/sub-juntendo750w05_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-juntendo750w05/anat/{sub-juntendo750w05_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz => sub-juntendo750w05_T2star_label-discs_desc-warp_dlabel.nii.gz} (100%) rename derivatives/labels/sub-juntendo750w05/anat/{sub-juntendo750w05_space-other_T2w_label-discs_dlabel.json => sub-juntendo750w05_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-juntendo750w05/anat/{sub-juntendo750w05_space-other_T2w_label-discs_dlabel.nii.gz => sub-juntendo750w05_T2w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-juntendo750w05/anat/sub-juntendo750w05_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-juntendo750w05/anat/{sub-juntendo750w05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-juntendo750w05_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-juntendo750w05/anat/sub-juntendo750w05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-juntendo750w05/anat/sub-juntendo750w05_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-juntendo750w05/anat/{sub-juntendo750w05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-juntendo750w05_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-juntendo750w05/anat/sub-juntendo750w05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json delete mode 100644 derivatives/labels/sub-juntendo750w05/anat/sub-juntendo750w05_space-other_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-juntendo750w06/anat/{sub-juntendo750w06_space-other_T1w_label-discs_dlabel.json => sub-juntendo750w06_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-juntendo750w06/anat/{sub-juntendo750w06_space-other_T1w_label-discs_dlabel.nii.gz => sub-juntendo750w06_T1w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-juntendo750w06/anat/sub-juntendo750w06_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-juntendo750w06/anat/{sub-juntendo750w06_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz => sub-juntendo750w06_T2star_label-discs_desc-warp_dlabel.nii.gz} (100%) rename derivatives/labels/sub-juntendo750w06/anat/{sub-juntendo750w06_space-other_T2w_label-discs_dlabel.json => sub-juntendo750w06_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-juntendo750w06/anat/{sub-juntendo750w06_space-other_T2w_label-discs_dlabel.nii.gz => sub-juntendo750w06_T2w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-juntendo750w06/anat/sub-juntendo750w06_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-juntendo750w06/anat/{sub-juntendo750w06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-juntendo750w06_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-juntendo750w06/anat/sub-juntendo750w06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-juntendo750w06/anat/sub-juntendo750w06_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-juntendo750w06/anat/{sub-juntendo750w06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-juntendo750w06_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-juntendo750w06/anat/sub-juntendo750w06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json delete mode 100644 derivatives/labels/sub-juntendo750w06/anat/sub-juntendo750w06_space-other_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-mgh01/anat/{sub-mgh01_space-other_T1w_label-discs_dlabel.json => sub-mgh01_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-mgh01/anat/{sub-mgh01_space-other_T1w_label-discs_dlabel.nii.gz => sub-mgh01_T1w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-mgh01/anat/sub-mgh01_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-mgh01/anat/{sub-mgh01_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz => sub-mgh01_T2star_label-discs_desc-warp_dlabel.nii.gz} (100%) rename derivatives/labels/sub-mgh01/anat/{sub-mgh01_space-other_T2w_label-discs_dlabel.json => sub-mgh01_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-mgh01/anat/{sub-mgh01_space-other_T2w_label-discs_dlabel.nii.gz => sub-mgh01_T2w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-mgh01/anat/sub-mgh01_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-mgh01/anat/{sub-mgh01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-mgh01_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-mgh01/anat/sub-mgh01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-mgh01/anat/sub-mgh01_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-mgh01/anat/{sub-mgh01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-mgh01_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-mgh01/anat/sub-mgh01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-mgh01/anat/sub-mgh01_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.json rename derivatives/labels/sub-mgh01/anat/{sub-mgh01_space-other_T1w_RPI_r_labels-manual.nii.gz => sub-mgh01_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-mgh01/anat/sub-mgh01_space-other_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-mgh02/anat/{sub-mgh02_space-other_T1w_label-discs_dlabel.json => sub-mgh02_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-mgh02/anat/{sub-mgh02_space-other_T1w_label-discs_dlabel.nii.gz => sub-mgh02_T1w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-mgh02/anat/sub-mgh02_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-mgh02/anat/{sub-mgh02_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz => sub-mgh02_T2star_label-discs_desc-warp_dlabel.nii.gz} (100%) rename derivatives/labels/sub-mgh02/anat/{sub-mgh02_space-other_T2w_label-discs_dlabel.json => sub-mgh02_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-mgh02/anat/{sub-mgh02_space-other_T2w_label-discs_dlabel.nii.gz => sub-mgh02_T2w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-mgh02/anat/sub-mgh02_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-mgh02/anat/{sub-mgh02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-mgh02_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-mgh02/anat/sub-mgh02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-mgh02/anat/sub-mgh02_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-mgh02/anat/{sub-mgh02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-mgh02_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-mgh02/anat/sub-mgh02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-mgh02/anat/sub-mgh02_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.json rename derivatives/labels/sub-mgh02/anat/{sub-mgh02_space-other_T1w_RPI_r_labels-manual.nii.gz => sub-mgh02_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-mgh02/anat/sub-mgh02_space-other_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-mgh03/anat/{sub-mgh03_space-other_T1w_label-discs_dlabel.json => sub-mgh03_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-mgh03/anat/{sub-mgh03_space-other_T1w_label-discs_dlabel.nii.gz => sub-mgh03_T1w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-mgh03/anat/sub-mgh03_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-mgh03/anat/{sub-mgh03_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz => sub-mgh03_T2star_label-discs_desc-warp_dlabel.nii.gz} (100%) rename derivatives/labels/sub-mgh03/anat/{sub-mgh03_space-other_T2w_label-discs_dlabel.json => sub-mgh03_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-mgh03/anat/{sub-mgh03_space-other_T2w_label-discs_dlabel.nii.gz => sub-mgh03_T2w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-mgh03/anat/sub-mgh03_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-mgh03/anat/{sub-mgh03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-mgh03_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-mgh03/anat/sub-mgh03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-mgh03/anat/sub-mgh03_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-mgh03/anat/{sub-mgh03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-mgh03_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-mgh03/anat/sub-mgh03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json delete mode 100644 derivatives/labels/sub-mgh03/anat/sub-mgh03_space-other_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-mgh04/anat/{sub-mgh04_space-other_T1w_label-discs_dlabel.json => sub-mgh04_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-mgh04/anat/{sub-mgh04_space-other_T1w_label-discs_dlabel.nii.gz => sub-mgh04_T1w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-mgh04/anat/sub-mgh04_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-mgh04/anat/{sub-mgh04_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz => sub-mgh04_T2star_label-discs_desc-warp_dlabel.nii.gz} (100%) rename derivatives/labels/sub-mgh04/anat/{sub-mgh04_space-other_T2w_label-discs_dlabel.json => sub-mgh04_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-mgh04/anat/{sub-mgh04_space-other_T2w_label-discs_dlabel.nii.gz => sub-mgh04_T2w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-mgh04/anat/sub-mgh04_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-mgh04/anat/{sub-mgh04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-mgh04_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-mgh04/anat/sub-mgh04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-mgh04/anat/sub-mgh04_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-mgh04/anat/{sub-mgh04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-mgh04_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-mgh04/anat/sub-mgh04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json delete mode 100644 derivatives/labels/sub-mgh04/anat/sub-mgh04_space-other_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-mgh05/anat/{sub-mgh05_space-other_T1w_label-discs_dlabel.json => sub-mgh05_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-mgh05/anat/{sub-mgh05_space-other_T1w_label-discs_dlabel.nii.gz => sub-mgh05_T1w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-mgh05/anat/sub-mgh05_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-mgh05/anat/{sub-mgh05_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz => sub-mgh05_T2star_label-discs_desc-warp_dlabel.nii.gz} (100%) rename derivatives/labels/sub-mgh05/anat/{sub-mgh05_space-other_T2w_label-discs_dlabel.json => sub-mgh05_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-mgh05/anat/{sub-mgh05_space-other_T2w_label-discs_dlabel.nii.gz => sub-mgh05_T2w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-mgh05/anat/sub-mgh05_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-mgh05/anat/{sub-mgh05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-mgh05_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-mgh05/anat/sub-mgh05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-mgh05/anat/sub-mgh05_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-mgh05/anat/{sub-mgh05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-mgh05_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-mgh05/anat/sub-mgh05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-mgh05/anat/sub-mgh05_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.json rename derivatives/labels/sub-mgh05/anat/{sub-mgh05_space-other_T1w_RPI_r_labels-manual.nii.gz => sub-mgh05_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-mgh05/anat/sub-mgh05_space-other_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-mgh06/anat/{sub-mgh06_space-other_T1w_label-discs_dlabel.json => sub-mgh06_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-mgh06/anat/{sub-mgh06_space-other_T1w_label-discs_dlabel.nii.gz => sub-mgh06_T1w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-mgh06/anat/sub-mgh06_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-mgh06/anat/{sub-mgh06_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz => sub-mgh06_T2star_label-discs_desc-warp_dlabel.nii.gz} (100%) rename derivatives/labels/sub-mgh06/anat/{sub-mgh06_space-other_T2w_label-discs_dlabel.json => sub-mgh06_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-mgh06/anat/{sub-mgh06_space-other_T2w_label-discs_dlabel.nii.gz => sub-mgh06_T2w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-mgh06/anat/sub-mgh06_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-mgh06/anat/{sub-mgh06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-mgh06_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-mgh06/anat/sub-mgh06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-mgh06/anat/sub-mgh06_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-mgh06/anat/{sub-mgh06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-mgh06_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-mgh06/anat/sub-mgh06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json delete mode 100644 derivatives/labels/sub-mgh06/anat/sub-mgh06_space-other_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-milan01/anat/{sub-milan01_space-other_T1w_label-discs_dlabel.json => sub-milan01_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-milan01/anat/{sub-milan01_space-other_T1w_label-discs_dlabel.nii.gz => sub-milan01_T1w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-milan01/anat/sub-milan01_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-milan01/anat/{sub-milan01_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz => sub-milan01_T2star_label-discs_desc-warp_dlabel.nii.gz} (100%) rename derivatives/labels/sub-milan01/anat/{sub-milan01_space-other_T2w_label-discs_dlabel.json => sub-milan01_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-milan01/anat/{sub-milan01_space-other_T2w_label-discs_dlabel.nii.gz => sub-milan01_T2w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-milan01/anat/sub-milan01_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-milan01/anat/{sub-milan01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-milan01_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-milan01/anat/sub-milan01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-milan01/anat/sub-milan01_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-milan01/anat/{sub-milan01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-milan01_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-milan01/anat/sub-milan01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-milan01/anat/sub-milan01_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.json rename derivatives/labels/sub-milan01/anat/{sub-milan01_space-other_T1w_RPI_r_labels-manual.nii.gz => sub-milan01_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-milan01/anat/sub-milan01_space-other_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-milan02/anat/{sub-milan02_space-other_T1w_label-discs_dlabel.json => sub-milan02_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-milan02/anat/{sub-milan02_space-other_T1w_label-discs_dlabel.nii.gz => sub-milan02_T1w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-milan02/anat/sub-milan02_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-milan02/anat/{sub-milan02_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz => sub-milan02_T2star_label-discs_desc-warp_dlabel.nii.gz} (100%) rename derivatives/labels/sub-milan02/anat/{sub-milan02_space-other_T2w_label-discs_dlabel.json => sub-milan02_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-milan02/anat/{sub-milan02_space-other_T2w_label-discs_dlabel.nii.gz => sub-milan02_T2w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-milan02/anat/sub-milan02_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-milan02/anat/{sub-milan02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-milan02_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-milan02/anat/sub-milan02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-milan02/anat/sub-milan02_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-milan02/anat/{sub-milan02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-milan02_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-milan02/anat/sub-milan02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json delete mode 100644 derivatives/labels/sub-milan02/anat/sub-milan02_space-other_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-milan03/anat/{sub-milan03_space-other_T1w_label-discs_dlabel.json => sub-milan03_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-milan03/anat/{sub-milan03_space-other_T1w_label-discs_dlabel.nii.gz => sub-milan03_T1w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-milan03/anat/sub-milan03_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-milan03/anat/{sub-milan03_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz => sub-milan03_T2star_label-discs_desc-warp_dlabel.nii.gz} (100%) rename derivatives/labels/sub-milan03/anat/{sub-milan03_space-other_T2w_label-discs_dlabel.json => sub-milan03_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-milan03/anat/{sub-milan03_space-other_T2w_label-discs_dlabel.nii.gz => sub-milan03_T2w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-milan03/anat/sub-milan03_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-milan03/anat/{sub-milan03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-milan03_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-milan03/anat/sub-milan03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-milan03/anat/sub-milan03_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-milan03/anat/{sub-milan03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-milan03_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-milan03/anat/sub-milan03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json delete mode 100644 derivatives/labels/sub-milan03/anat/sub-milan03_space-other_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-milan04/anat/{sub-milan04_space-other_T1w_label-discs_dlabel.json => sub-milan04_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-milan04/anat/{sub-milan04_space-other_T1w_label-discs_dlabel.nii.gz => sub-milan04_T1w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-milan04/anat/sub-milan04_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-milan04/anat/{sub-milan04_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz => sub-milan04_T2star_label-discs_desc-warp_dlabel.nii.gz} (100%) rename derivatives/labels/sub-milan04/anat/{sub-milan04_space-other_T2w_label-discs_dlabel.json => sub-milan04_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-milan04/anat/{sub-milan04_space-other_T2w_label-discs_dlabel.nii.gz => sub-milan04_T2w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-milan04/anat/sub-milan04_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-milan04/anat/{sub-milan04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-milan04_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-milan04/anat/sub-milan04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-milan04/anat/sub-milan04_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-milan04/anat/{sub-milan04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-milan04_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-milan04/anat/sub-milan04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json delete mode 100644 derivatives/labels/sub-milan04/anat/sub-milan04_space-other_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-milan05/anat/{sub-milan05_space-other_T1w_label-discs_dlabel.json => sub-milan05_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-milan05/anat/{sub-milan05_space-other_T1w_label-discs_dlabel.nii.gz => sub-milan05_T1w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-milan05/anat/sub-milan05_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-milan05/anat/{sub-milan05_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz => sub-milan05_T2star_label-discs_desc-warp_dlabel.nii.gz} (100%) rename derivatives/labels/sub-milan05/anat/{sub-milan05_space-other_T2w_label-discs_dlabel.json => sub-milan05_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-milan05/anat/{sub-milan05_space-other_T2w_label-discs_dlabel.nii.gz => sub-milan05_T2w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-milan05/anat/sub-milan05_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-milan05/anat/{sub-milan05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-milan05_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-milan05/anat/sub-milan05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-milan05/anat/sub-milan05_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-milan05/anat/{sub-milan05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-milan05_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-milan05/anat/sub-milan05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json delete mode 100644 derivatives/labels/sub-milan05/anat/sub-milan05_space-other_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-milan06/anat/{sub-milan06_space-other_T1w_label-discs_dlabel.json => sub-milan06_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-milan06/anat/{sub-milan06_space-other_T1w_label-discs_dlabel.nii.gz => sub-milan06_T1w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-milan06/anat/sub-milan06_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-milan06/anat/{sub-milan06_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz => sub-milan06_T2star_label-discs_desc-warp_dlabel.nii.gz} (100%) rename derivatives/labels/sub-milan06/anat/{sub-milan06_space-other_T2w_label-discs_dlabel.json => sub-milan06_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-milan06/anat/{sub-milan06_space-other_T2w_label-discs_dlabel.nii.gz => sub-milan06_T2w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-milan06/anat/sub-milan06_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-milan06/anat/{sub-milan06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-milan06_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 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derivatives/labels/sub-milan07/anat/sub-milan07_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-milan07/anat/{sub-milan07_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz => sub-milan07_T2star_label-discs_desc-warp_dlabel.nii.gz} (100%) rename derivatives/labels/sub-milan07/anat/{sub-milan07_space-other_T2w_label-discs_dlabel.json => sub-milan07_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-milan07/anat/{sub-milan07_space-other_T2w_label-discs_dlabel.nii.gz => sub-milan07_T2w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-milan07/anat/sub-milan07_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-milan07/anat/{sub-milan07_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-milan07_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-milan07/anat/sub-milan07_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-milan07/anat/sub-milan07_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-milan07/anat/{sub-milan07_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-milan07_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-milan07/anat/sub-milan07_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json delete mode 100644 derivatives/labels/sub-milan07/anat/sub-milan07_space-other_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-mniPilot1/anat/{sub-mniPilot1_space-other_T1w_label-discs_dlabel.json => sub-mniPilot1_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-mniPilot1/anat/{sub-mniPilot1_space-other_T1w_label-discs_dlabel.nii.gz => sub-mniPilot1_T1w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-mniPilot1/anat/sub-mniPilot1_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-mniPilot1/anat/{sub-mniPilot1_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz => sub-mniPilot1_T2star_label-discs_desc-warp_dlabel.nii.gz} (100%) rename derivatives/labels/sub-mniPilot1/anat/{sub-mniPilot1_space-other_T2w_label-discs_dlabel.json => sub-mniPilot1_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-mniPilot1/anat/{sub-mniPilot1_space-other_T2w_label-discs_dlabel.nii.gz => sub-mniPilot1_T2w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-mniPilot1/anat/sub-mniPilot1_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-mniPilot1/anat/{sub-mniPilot1_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-mniPilot1_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-mniPilot1/anat/sub-mniPilot1_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-mniPilot1/anat/sub-mniPilot1_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-mniPilot1/anat/{sub-mniPilot1_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-mniPilot1_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-mniPilot1/anat/sub-mniPilot1_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-mniPilot1/anat/sub-mniPilot1_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.json rename derivatives/labels/sub-mniPilot1/anat/{sub-mniPilot1_space-other_T1w_RPI_r_labels-manual.nii.gz => sub-mniPilot1_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-mniPilot1/anat/sub-mniPilot1_space-other_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-mniS01/anat/{sub-mniS01_space-other_T1w_label-discs_dlabel.json => sub-mniS01_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-mniS01/anat/{sub-mniS01_space-other_T1w_label-discs_dlabel.nii.gz => sub-mniS01_T1w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-mniS01/anat/sub-mniS01_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-mniS01/anat/{sub-mniS01_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz => sub-mniS01_T2star_label-discs_desc-warp_dlabel.nii.gz} (100%) rename derivatives/labels/sub-mniS01/anat/{sub-mniS01_space-other_T2w_label-discs_dlabel.json => sub-mniS01_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-mniS01/anat/{sub-mniS01_space-other_T2w_label-discs_dlabel.nii.gz => sub-mniS01_T2w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-mniS01/anat/sub-mniS01_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-mniS01/anat/{sub-mniS01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-mniS01_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-mniS01/anat/sub-mniS01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-mniS01/anat/sub-mniS01_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-mniS01/anat/{sub-mniS01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-mniS01_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-mniS01/anat/sub-mniS01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json delete mode 100644 derivatives/labels/sub-mniS01/anat/sub-mniS01_space-other_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-mniS02/anat/{sub-mniS02_space-other_T1w_label-discs_dlabel.json => sub-mniS02_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-mniS02/anat/{sub-mniS02_space-other_T1w_label-discs_dlabel.nii.gz => sub-mniS02_T1w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-mniS02/anat/sub-mniS02_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-mniS02/anat/{sub-mniS02_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz => sub-mniS02_T2star_label-discs_desc-warp_dlabel.nii.gz} (100%) rename derivatives/labels/sub-mniS02/anat/{sub-mniS02_space-other_T2w_label-discs_dlabel.json => sub-mniS02_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-mniS02/anat/{sub-mniS02_space-other_T2w_label-discs_dlabel.nii.gz => sub-mniS02_T2w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-mniS02/anat/sub-mniS02_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-mniS02/anat/{sub-mniS02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-mniS02_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-mniS02/anat/sub-mniS02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-mniS02/anat/sub-mniS02_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-mniS02/anat/{sub-mniS02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-mniS02_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-mniS02/anat/sub-mniS02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json delete mode 100644 derivatives/labels/sub-mniS02/anat/sub-mniS02_space-other_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-mniS03/anat/{sub-mniS03_space-other_T1w_label-discs_dlabel.json => sub-mniS03_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-mniS03/anat/{sub-mniS03_space-other_T1w_label-discs_dlabel.nii.gz => sub-mniS03_T1w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-mniS03/anat/sub-mniS03_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-mniS03/anat/{sub-mniS03_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz => sub-mniS03_T2star_label-discs_desc-warp_dlabel.nii.gz} (100%) rename derivatives/labels/sub-mniS03/anat/{sub-mniS03_space-other_T2w_label-discs_dlabel.json => sub-mniS03_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-mniS03/anat/{sub-mniS03_space-other_T2w_label-discs_dlabel.nii.gz => sub-mniS03_T2w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-mniS03/anat/sub-mniS03_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-mniS03/anat/{sub-mniS03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-mniS03_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-mniS03/anat/sub-mniS03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-mniS03/anat/sub-mniS03_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-mniS03/anat/{sub-mniS03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-mniS03_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-mniS03/anat/sub-mniS03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json delete mode 100644 derivatives/labels/sub-mniS03/anat/sub-mniS03_space-other_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-mniS04/anat/{sub-mniS04_space-other_T1w_label-discs_dlabel.json => sub-mniS04_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-mniS04/anat/{sub-mniS04_space-other_T1w_label-discs_dlabel.nii.gz => sub-mniS04_T1w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-mniS04/anat/sub-mniS04_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-mniS04/anat/{sub-mniS04_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz => sub-mniS04_T2star_label-discs_desc-warp_dlabel.nii.gz} (100%) rename derivatives/labels/sub-mniS04/anat/{sub-mniS04_space-other_T2w_label-discs_dlabel.json => sub-mniS04_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-mniS04/anat/{sub-mniS04_space-other_T2w_label-discs_dlabel.nii.gz => sub-mniS04_T2w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-mniS04/anat/sub-mniS04_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-mniS04/anat/{sub-mniS04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-mniS04_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-mniS04/anat/sub-mniS04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-mniS04/anat/sub-mniS04_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-mniS04/anat/{sub-mniS04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-mniS04_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-mniS04/anat/sub-mniS04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json delete mode 100644 derivatives/labels/sub-mniS04/anat/sub-mniS04_space-other_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-mniS05/anat/{sub-mniS05_space-other_T1w_label-discs_dlabel.json => sub-mniS05_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-mniS05/anat/{sub-mniS05_space-other_T1w_label-discs_dlabel.nii.gz => sub-mniS05_T1w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-mniS05/anat/sub-mniS05_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-mniS05/anat/{sub-mniS05_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz => sub-mniS05_T2star_label-discs_desc-warp_dlabel.nii.gz} (100%) rename derivatives/labels/sub-mniS05/anat/{sub-mniS05_space-other_T2w_label-discs_dlabel.json => sub-mniS05_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-mniS05/anat/{sub-mniS05_space-other_T2w_label-discs_dlabel.nii.gz => sub-mniS05_T2w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-mniS05/anat/sub-mniS05_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-mniS05/anat/{sub-mniS05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-mniS05_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-mniS05/anat/sub-mniS05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-mniS05/anat/sub-mniS05_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-mniS05/anat/{sub-mniS05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-mniS05_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-mniS05/anat/sub-mniS05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json delete mode 100644 derivatives/labels/sub-mniS05/anat/sub-mniS05_space-other_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-mniS06/anat/{sub-mniS06_space-other_T1w_label-discs_dlabel.json => sub-mniS06_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-mniS06/anat/{sub-mniS06_space-other_T1w_label-discs_dlabel.nii.gz => sub-mniS06_T1w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-mniS06/anat/sub-mniS06_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-mniS06/anat/{sub-mniS06_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz => sub-mniS06_T2star_label-discs_desc-warp_dlabel.nii.gz} (100%) rename derivatives/labels/sub-mniS06/anat/{sub-mniS06_space-other_T2w_label-discs_dlabel.json => sub-mniS06_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-mniS06/anat/{sub-mniS06_space-other_T2w_label-discs_dlabel.nii.gz => sub-mniS06_T2w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-mniS06/anat/sub-mniS06_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-mniS06/anat/{sub-mniS06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-mniS06_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-mniS06/anat/sub-mniS06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-mniS06/anat/sub-mniS06_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-mniS06/anat/{sub-mniS06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-mniS06_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-mniS06/anat/sub-mniS06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json delete mode 100644 derivatives/labels/sub-mniS06/anat/sub-mniS06_space-other_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-mniS07/anat/{sub-mniS07_space-other_T1w_label-discs_dlabel.json => sub-mniS07_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-mniS07/anat/{sub-mniS07_space-other_T1w_label-discs_dlabel.nii.gz => sub-mniS07_T1w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-mniS07/anat/sub-mniS07_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-mniS07/anat/{sub-mniS07_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz => sub-mniS07_T2star_label-discs_desc-warp_dlabel.nii.gz} (100%) rename derivatives/labels/sub-mniS07/anat/{sub-mniS07_space-other_T2w_label-discs_dlabel.json => sub-mniS07_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-mniS07/anat/{sub-mniS07_space-other_T2w_label-discs_dlabel.nii.gz => sub-mniS07_T2w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-mniS07/anat/sub-mniS07_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-mniS07/anat/{sub-mniS07_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-mniS07_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-mniS07/anat/sub-mniS07_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-mniS07/anat/sub-mniS07_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-mniS07/anat/{sub-mniS07_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-mniS07_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-mniS07/anat/sub-mniS07_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json delete mode 100644 derivatives/labels/sub-mniS07/anat/sub-mniS07_space-other_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-mniS08/anat/{sub-mniS08_space-other_T1w_label-discs_dlabel.json => sub-mniS08_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-mniS08/anat/{sub-mniS08_space-other_T1w_label-discs_dlabel.nii.gz => sub-mniS08_T1w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-mniS08/anat/sub-mniS08_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-mniS08/anat/{sub-mniS08_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz => sub-mniS08_T2star_label-discs_desc-warp_dlabel.nii.gz} (100%) rename derivatives/labels/sub-mniS08/anat/{sub-mniS08_space-other_T2w_label-discs_dlabel.json => sub-mniS08_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-mniS08/anat/{sub-mniS08_space-other_T2w_label-discs_dlabel.nii.gz => sub-mniS08_T2w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-mniS08/anat/sub-mniS08_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-mniS08/anat/{sub-mniS08_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-mniS08_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-mniS08/anat/sub-mniS08_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-mniS08/anat/sub-mniS08_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-mniS08/anat/{sub-mniS08_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-mniS08_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-mniS08/anat/sub-mniS08_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json delete mode 100644 derivatives/labels/sub-mniS08/anat/sub-mniS08_space-other_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-mniS09/anat/{sub-mniS09_space-other_T1w_label-discs_dlabel.json => sub-mniS09_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-mniS09/anat/{sub-mniS09_space-other_T1w_label-discs_dlabel.nii.gz => sub-mniS09_T1w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-mniS09/anat/sub-mniS09_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-mniS09/anat/{sub-mniS09_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz => sub-mniS09_T2star_label-discs_desc-warp_dlabel.nii.gz} (100%) rename derivatives/labels/sub-mniS09/anat/{sub-mniS09_space-other_T2w_label-discs_dlabel.json => sub-mniS09_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-mniS09/anat/{sub-mniS09_space-other_T2w_label-discs_dlabel.nii.gz => sub-mniS09_T2w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-mniS09/anat/sub-mniS09_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-mniS09/anat/{sub-mniS09_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-mniS09_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-mniS09/anat/sub-mniS09_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-mniS09/anat/sub-mniS09_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-mniS09/anat/{sub-mniS09_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-mniS09_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-mniS09/anat/sub-mniS09_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json delete mode 100644 derivatives/labels/sub-mniS09/anat/sub-mniS09_space-other_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-mountSinai01/anat/{sub-mountSinai01_space-other_T1w_label-discs_dlabel.json => sub-mountSinai01_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-mountSinai01/anat/{sub-mountSinai01_space-other_T1w_label-discs_dlabel.nii.gz => sub-mountSinai01_T1w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-mountSinai01/anat/sub-mountSinai01_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-mountSinai01/anat/{sub-mountSinai01_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz => sub-mountSinai01_T2star_label-discs_desc-warp_dlabel.nii.gz} (100%) rename derivatives/labels/sub-mountSinai01/anat/{sub-mountSinai01_space-other_T2w_label-discs_dlabel.json => sub-mountSinai01_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-mountSinai01/anat/{sub-mountSinai01_space-other_T2w_label-discs_dlabel.nii.gz => sub-mountSinai01_T2w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-mountSinai01/anat/sub-mountSinai01_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-mountSinai01/anat/{sub-mountSinai01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-mountSinai01_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-mountSinai01/anat/sub-mountSinai01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-mountSinai01/anat/sub-mountSinai01_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-mountSinai01/anat/{sub-mountSinai01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-mountSinai01_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-mountSinai01/anat/sub-mountSinai01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json delete mode 100644 derivatives/labels/sub-mountSinai01/anat/sub-mountSinai01_space-other_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-mountSinai02/anat/{sub-mountSinai02_space-other_T1w_label-discs_dlabel.json => sub-mountSinai02_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-mountSinai02/anat/{sub-mountSinai02_space-other_T1w_label-discs_dlabel.nii.gz => sub-mountSinai02_T1w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-mountSinai02/anat/sub-mountSinai02_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-mountSinai02/anat/{sub-mountSinai02_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz => sub-mountSinai02_T2star_label-discs_desc-warp_dlabel.nii.gz} (100%) rename derivatives/labels/sub-mountSinai02/anat/{sub-mountSinai02_space-other_T2w_label-discs_dlabel.json => sub-mountSinai02_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-mountSinai02/anat/{sub-mountSinai02_space-other_T2w_label-discs_dlabel.nii.gz => sub-mountSinai02_T2w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-mountSinai02/anat/sub-mountSinai02_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-mountSinai02/anat/{sub-mountSinai02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-mountSinai02_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-mountSinai02/anat/sub-mountSinai02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-mountSinai02/anat/sub-mountSinai02_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-mountSinai02/anat/{sub-mountSinai02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-mountSinai02_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-mountSinai02/anat/sub-mountSinai02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json delete mode 100644 derivatives/labels/sub-mountSinai02/anat/sub-mountSinai02_space-other_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-mountSinai03/anat/{sub-mountSinai03_space-other_T1w_label-discs_dlabel.json => sub-mountSinai03_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-mountSinai03/anat/{sub-mountSinai03_space-other_T1w_label-discs_dlabel.nii.gz => sub-mountSinai03_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-mountSinai03/anat/{sub-mountSinai03_space-other_T2w_label-discs_dlabel.json => sub-mountSinai03_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-mountSinai03/anat/{sub-mountSinai03_space-other_T2w_label-discs_dlabel.nii.gz => sub-mountSinai03_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-mountSinai04/anat/{sub-mountSinai04_space-other_T1w_label-discs_dlabel.json => sub-mountSinai04_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-mountSinai04/anat/{sub-mountSinai04_space-other_T1w_label-discs_dlabel.nii.gz => sub-mountSinai04_T1w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-mountSinai04/anat/sub-mountSinai04_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-mountSinai04/anat/{sub-mountSinai04_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz => sub-mountSinai04_T2star_label-discs_desc-warp_dlabel.nii.gz} (100%) rename derivatives/labels/sub-mountSinai04/anat/{sub-mountSinai04_space-other_T2w_label-discs_dlabel.json => sub-mountSinai04_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-mountSinai04/anat/{sub-mountSinai04_space-other_T2w_label-discs_dlabel.nii.gz => sub-mountSinai04_T2w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-mountSinai04/anat/sub-mountSinai04_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-mountSinai04/anat/{sub-mountSinai04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-mountSinai04_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-mountSinai04/anat/sub-mountSinai04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-mountSinai04/anat/sub-mountSinai04_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-mountSinai04/anat/{sub-mountSinai04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-mountSinai04_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-mountSinai04/anat/sub-mountSinai04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json delete mode 100644 derivatives/labels/sub-mountSinai04/anat/sub-mountSinai04_space-other_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-mountSinai05/anat/{sub-mountSinai05_space-other_T1w_label-discs_dlabel.json => sub-mountSinai05_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-mountSinai05/anat/{sub-mountSinai05_space-other_T1w_label-discs_dlabel.nii.gz => sub-mountSinai05_T1w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-mountSinai05/anat/sub-mountSinai05_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-mountSinai05/anat/{sub-mountSinai05_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz => sub-mountSinai05_T2star_label-discs_desc-warp_dlabel.nii.gz} (100%) rename derivatives/labels/sub-mountSinai05/anat/{sub-mountSinai05_space-other_T2w_label-discs_dlabel.json => sub-mountSinai05_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-mountSinai05/anat/{sub-mountSinai05_space-other_T2w_label-discs_dlabel.nii.gz => sub-mountSinai05_T2w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-mountSinai05/anat/sub-mountSinai05_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-mountSinai05/anat/{sub-mountSinai05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-mountSinai05_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-mountSinai05/anat/sub-mountSinai05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-mountSinai05/anat/sub-mountSinai05_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-mountSinai05/anat/{sub-mountSinai05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-mountSinai05_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-mountSinai05/anat/sub-mountSinai05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json delete mode 100644 derivatives/labels/sub-mountSinai05/anat/sub-mountSinai05_space-other_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-mountSinai06/anat/{sub-mountSinai06_space-other_T1w_label-discs_dlabel.json => sub-mountSinai06_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-mountSinai06/anat/{sub-mountSinai06_space-other_T1w_label-discs_dlabel.nii.gz => sub-mountSinai06_T1w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-mountSinai06/anat/sub-mountSinai06_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-mountSinai06/anat/{sub-mountSinai06_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz => sub-mountSinai06_T2star_label-discs_desc-warp_dlabel.nii.gz} (100%) rename derivatives/labels/sub-mountSinai06/anat/{sub-mountSinai06_space-other_T2w_label-discs_dlabel.json => sub-mountSinai06_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-mountSinai06/anat/{sub-mountSinai06_space-other_T2w_label-discs_dlabel.nii.gz => sub-mountSinai06_T2w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-mountSinai06/anat/sub-mountSinai06_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-mountSinai06/anat/{sub-mountSinai06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-mountSinai06_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-mountSinai06/anat/sub-mountSinai06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-mountSinai06/anat/sub-mountSinai06_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-mountSinai06/anat/{sub-mountSinai06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-mountSinai06_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-mountSinai06/anat/sub-mountSinai06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json delete mode 100644 derivatives/labels/sub-mountSinai06/anat/sub-mountSinai06_space-other_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-mpicbs01/anat/{sub-mpicbs01_space-other_T1w_label-discs_dlabel.json => sub-mpicbs01_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-mpicbs01/anat/{sub-mpicbs01_space-other_T1w_label-discs_dlabel.nii.gz => sub-mpicbs01_T1w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-mpicbs01/anat/sub-mpicbs01_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-mpicbs01/anat/{sub-mpicbs01_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz => sub-mpicbs01_T2star_label-discs_desc-warp_dlabel.nii.gz} (100%) rename derivatives/labels/sub-mpicbs01/anat/{sub-mpicbs01_space-other_T2w_label-discs_dlabel.json => sub-mpicbs01_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-mpicbs01/anat/{sub-mpicbs01_space-other_T2w_label-discs_dlabel.nii.gz => sub-mpicbs01_T2w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-mpicbs01/anat/sub-mpicbs01_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-mpicbs01/anat/{sub-mpicbs01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-mpicbs01_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-mpicbs01/anat/sub-mpicbs01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-mpicbs01/anat/sub-mpicbs01_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-mpicbs01/anat/{sub-mpicbs01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-mpicbs01_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-mpicbs01/anat/sub-mpicbs01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-mpicbs01/anat/sub-mpicbs01_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.json rename derivatives/labels/sub-mpicbs01/anat/{sub-mpicbs01_space-other_T1w_RPI_r_labels-manual.nii.gz => sub-mpicbs01_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-mpicbs01/anat/sub-mpicbs01_space-other_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-mpicbs02/anat/{sub-mpicbs02_space-other_T1w_label-discs_dlabel.json => sub-mpicbs02_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-mpicbs02/anat/{sub-mpicbs02_space-other_T1w_label-discs_dlabel.nii.gz => sub-mpicbs02_T1w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-mpicbs02/anat/sub-mpicbs02_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-mpicbs02/anat/{sub-mpicbs02_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz => sub-mpicbs02_T2star_label-discs_desc-warp_dlabel.nii.gz} (100%) rename derivatives/labels/sub-mpicbs02/anat/{sub-mpicbs02_space-other_T2w_label-discs_dlabel.json => sub-mpicbs02_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-mpicbs02/anat/{sub-mpicbs02_space-other_T2w_label-discs_dlabel.nii.gz => sub-mpicbs02_T2w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-mpicbs02/anat/sub-mpicbs02_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-mpicbs02/anat/{sub-mpicbs02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-mpicbs02_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-mpicbs02/anat/sub-mpicbs02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-mpicbs02/anat/sub-mpicbs02_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-mpicbs02/anat/{sub-mpicbs02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-mpicbs02_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-mpicbs02/anat/sub-mpicbs02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json delete mode 100644 derivatives/labels/sub-mpicbs02/anat/sub-mpicbs02_space-other_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-mpicbs03/anat/{sub-mpicbs03_space-other_T1w_label-discs_dlabel.json => sub-mpicbs03_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-mpicbs03/anat/{sub-mpicbs03_space-other_T1w_label-discs_dlabel.nii.gz => sub-mpicbs03_T1w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-mpicbs03/anat/sub-mpicbs03_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-mpicbs03/anat/{sub-mpicbs03_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz => sub-mpicbs03_T2star_label-discs_desc-warp_dlabel.nii.gz} (100%) rename derivatives/labels/sub-mpicbs03/anat/{sub-mpicbs03_space-other_T2w_label-discs_dlabel.json => sub-mpicbs03_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-mpicbs03/anat/{sub-mpicbs03_space-other_T2w_label-discs_dlabel.nii.gz => sub-mpicbs03_T2w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-mpicbs03/anat/sub-mpicbs03_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-mpicbs03/anat/{sub-mpicbs03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-mpicbs03_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-mpicbs03/anat/sub-mpicbs03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-mpicbs03/anat/sub-mpicbs03_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-mpicbs03/anat/{sub-mpicbs03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-mpicbs03_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-mpicbs03/anat/sub-mpicbs03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json delete mode 100644 derivatives/labels/sub-mpicbs03/anat/sub-mpicbs03_space-other_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-mpicbs05/anat/{sub-mpicbs05_space-other_T1w_label-discs_dlabel.json => sub-mpicbs05_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-mpicbs05/anat/{sub-mpicbs05_space-other_T1w_label-discs_dlabel.nii.gz => sub-mpicbs05_T1w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-mpicbs05/anat/sub-mpicbs05_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-mpicbs05/anat/{sub-mpicbs05_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz => sub-mpicbs05_T2star_label-discs_desc-warp_dlabel.nii.gz} (100%) rename derivatives/labels/sub-mpicbs05/anat/{sub-mpicbs05_space-other_T2w_label-discs_dlabel.json => sub-mpicbs05_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-mpicbs05/anat/{sub-mpicbs05_space-other_T2w_label-discs_dlabel.nii.gz => sub-mpicbs05_T2w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-mpicbs05/anat/sub-mpicbs05_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-mpicbs05/anat/{sub-mpicbs05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-mpicbs05_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-mpicbs05/anat/sub-mpicbs05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-mpicbs05/anat/sub-mpicbs05_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-mpicbs05/anat/{sub-mpicbs05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-mpicbs05_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-mpicbs05/anat/sub-mpicbs05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json delete mode 100644 derivatives/labels/sub-mpicbs05/anat/sub-mpicbs05_space-other_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-mpicbs06/anat/{sub-mpicbs06_space-other_T1w_label-discs_dlabel.json => sub-mpicbs06_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-mpicbs06/anat/{sub-mpicbs06_space-other_T1w_label-discs_dlabel.nii.gz => sub-mpicbs06_T1w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-mpicbs06/anat/sub-mpicbs06_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-mpicbs06/anat/{sub-mpicbs06_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz => sub-mpicbs06_T2star_label-discs_desc-warp_dlabel.nii.gz} (100%) rename derivatives/labels/sub-mpicbs06/anat/{sub-mpicbs06_space-other_T2w_label-discs_dlabel.json => sub-mpicbs06_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-mpicbs06/anat/{sub-mpicbs06_space-other_T2w_label-discs_dlabel.nii.gz => sub-mpicbs06_T2w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-mpicbs06/anat/sub-mpicbs06_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-mpicbs06/anat/{sub-mpicbs06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-mpicbs06_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-mpicbs06/anat/sub-mpicbs06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-mpicbs06/anat/sub-mpicbs06_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-mpicbs06/anat/{sub-mpicbs06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-mpicbs06_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-mpicbs06/anat/sub-mpicbs06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json delete mode 100644 derivatives/labels/sub-mpicbs06/anat/sub-mpicbs06_space-other_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-mpicbs07/anat/{sub-mpicbs07_space-other_T1w_label-discs_dlabel.json => sub-mpicbs07_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-mpicbs07/anat/{sub-mpicbs07_space-other_T1w_label-discs_dlabel.nii.gz => sub-mpicbs07_T1w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-mpicbs07/anat/sub-mpicbs07_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-mpicbs07/anat/{sub-mpicbs07_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz => sub-mpicbs07_T2star_label-discs_desc-warp_dlabel.nii.gz} (100%) rename derivatives/labels/sub-mpicbs07/anat/{sub-mpicbs07_space-other_T2w_label-discs_dlabel.json => sub-mpicbs07_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-mpicbs07/anat/{sub-mpicbs07_space-other_T2w_label-discs_dlabel.nii.gz => sub-mpicbs07_T2w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-mpicbs07/anat/sub-mpicbs07_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-mpicbs07/anat/{sub-mpicbs07_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-mpicbs07_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-mpicbs07/anat/sub-mpicbs07_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-mpicbs07/anat/sub-mpicbs07_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-mpicbs07/anat/{sub-mpicbs07_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-mpicbs07_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-mpicbs07/anat/sub-mpicbs07_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json delete mode 100644 derivatives/labels/sub-mpicbs07/anat/sub-mpicbs07_space-other_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-nottwil01/anat/{sub-nottwil01_space-other_T1w_label-discs_dlabel.json => sub-nottwil01_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-nottwil01/anat/{sub-nottwil01_space-other_T1w_label-discs_dlabel.nii.gz => sub-nottwil01_T1w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-nottwil01/anat/sub-nottwil01_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-nottwil01/anat/{sub-nottwil01_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz => sub-nottwil01_T2star_label-discs_desc-warp_dlabel.nii.gz} (100%) rename derivatives/labels/sub-nottwil01/anat/{sub-nottwil01_space-other_T2w_label-discs_dlabel.json => sub-nottwil01_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-nottwil01/anat/{sub-nottwil01_space-other_T2w_label-discs_dlabel.nii.gz => sub-nottwil01_T2w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-nottwil01/anat/sub-nottwil01_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-nottwil01/anat/{sub-nottwil01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-nottwil01_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-nottwil01/anat/sub-nottwil01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-nottwil01/anat/sub-nottwil01_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-nottwil01/anat/{sub-nottwil01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-nottwil01_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-nottwil01/anat/sub-nottwil01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json delete mode 100644 derivatives/labels/sub-nottwil01/anat/sub-nottwil01_space-other_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-nottwil01/anat/{sub-nottwil01_space-other_T2w_csflabel-SC_seg.json => sub-nottwil01_space-other_T2w_label-CSF_seg.json} (100%) rename derivatives/labels/sub-nottwil01/anat/{sub-nottwil01_space-other_T2w_csflabel-SC_seg.nii.gz => sub-nottwil01_space-other_T2w_label-CSF_seg.nii.gz} (100%) create mode 100644 derivatives/labels/sub-nottwil01/anat/sub-nottwil01_space-other_T2w_label-canal_seg.json create mode 100644 derivatives/labels/sub-nottwil01/anat/sub-nottwil01_space-other_T2w_label-canal_seg.nii.gz rename derivatives/labels/sub-nottwil02/anat/{sub-nottwil02_space-other_T1w_label-discs_dlabel.json => sub-nottwil02_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-nottwil02/anat/{sub-nottwil02_space-other_T1w_label-discs_dlabel.nii.gz => sub-nottwil02_T1w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-nottwil02/anat/sub-nottwil02_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-nottwil02/anat/{sub-nottwil02_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz => sub-nottwil02_T2star_label-discs_desc-warp_dlabel.nii.gz} (100%) rename derivatives/labels/sub-nottwil02/anat/{sub-nottwil02_space-other_T2w_label-discs_dlabel.json => sub-nottwil02_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-nottwil02/anat/{sub-nottwil02_space-other_T2w_label-discs_dlabel.nii.gz => sub-nottwil02_T2w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-nottwil02/anat/sub-nottwil02_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-nottwil02/anat/{sub-nottwil02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-nottwil02_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-nottwil02/anat/sub-nottwil02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-nottwil02/anat/sub-nottwil02_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-nottwil02/anat/{sub-nottwil02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-nottwil02_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-nottwil02/anat/sub-nottwil02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json delete mode 100644 derivatives/labels/sub-nottwil02/anat/sub-nottwil02_space-other_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-nottwil03/anat/{sub-nottwil03_space-other_T1w_label-discs_dlabel.json => sub-nottwil03_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-nottwil03/anat/{sub-nottwil03_space-other_T1w_label-discs_dlabel.nii.gz => sub-nottwil03_T1w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-nottwil03/anat/sub-nottwil03_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-nottwil03/anat/{sub-nottwil03_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz => sub-nottwil03_T2star_label-discs_desc-warp_dlabel.nii.gz} (100%) rename derivatives/labels/sub-nottwil03/anat/{sub-nottwil03_space-other_T2w_label-discs_dlabel.json => sub-nottwil03_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-nottwil03/anat/{sub-nottwil03_space-other_T2w_label-discs_dlabel.nii.gz => sub-nottwil03_T2w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-nottwil03/anat/sub-nottwil03_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-nottwil03/anat/{sub-nottwil03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-nottwil03_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-nottwil03/anat/sub-nottwil03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-nottwil03/anat/sub-nottwil03_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-nottwil03/anat/{sub-nottwil03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-nottwil03_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-nottwil03/anat/sub-nottwil03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json delete mode 100644 derivatives/labels/sub-nottwil03/anat/sub-nottwil03_space-other_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-nottwil03/anat/{sub-nottwil03_space-other_T2w_csflabel-SC_seg.json => sub-nottwil03_space-other_T2w_label-CSF_seg.json} (100%) rename derivatives/labels/sub-nottwil03/anat/{sub-nottwil03_space-other_T2w_csflabel-SC_seg.nii.gz => sub-nottwil03_space-other_T2w_label-CSF_seg.nii.gz} (100%) create mode 100644 derivatives/labels/sub-nottwil03/anat/sub-nottwil03_space-other_T2w_label-canal_seg.json create mode 100644 derivatives/labels/sub-nottwil03/anat/sub-nottwil03_space-other_T2w_label-canal_seg.nii.gz rename derivatives/labels/sub-nottwil04/anat/{sub-nottwil04_space-other_T1w_label-discs_dlabel.json => sub-nottwil04_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-nottwil04/anat/{sub-nottwil04_space-other_T1w_label-discs_dlabel.nii.gz => sub-nottwil04_T1w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-nottwil04/anat/sub-nottwil04_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-nottwil04/anat/{sub-nottwil04_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz => sub-nottwil04_T2star_label-discs_desc-warp_dlabel.nii.gz} (100%) rename derivatives/labels/sub-nottwil04/anat/{sub-nottwil04_space-other_T2w_label-discs_dlabel.json => sub-nottwil04_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-nottwil04/anat/{sub-nottwil04_space-other_T2w_label-discs_dlabel.nii.gz => sub-nottwil04_T2w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-nottwil04/anat/sub-nottwil04_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-nottwil04/anat/{sub-nottwil04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-nottwil04_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 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sub-nottwil04_space-other_T2w_label-CSF_seg.nii.gz} (100%) create mode 100644 derivatives/labels/sub-nottwil04/anat/sub-nottwil04_space-other_T2w_label-canal_seg.json create mode 100644 derivatives/labels/sub-nottwil04/anat/sub-nottwil04_space-other_T2w_label-canal_seg.nii.gz rename derivatives/labels/sub-nottwil05/anat/{sub-nottwil05_space-other_T1w_label-discs_dlabel.json => sub-nottwil05_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-nottwil05/anat/{sub-nottwil05_space-other_T1w_label-discs_dlabel.nii.gz => sub-nottwil05_T1w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-nottwil05/anat/sub-nottwil05_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-nottwil05/anat/{sub-nottwil05_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz => sub-nottwil05_T2star_label-discs_desc-warp_dlabel.nii.gz} (100%) rename derivatives/labels/sub-nottwil05/anat/{sub-nottwil05_space-other_T2w_label-discs_dlabel.json => sub-nottwil05_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-nottwil05/anat/{sub-nottwil05_space-other_T2w_label-discs_dlabel.nii.gz => sub-nottwil05_T2w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-nottwil05/anat/sub-nottwil05_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-nottwil05/anat/{sub-nottwil05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-nottwil05_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-nottwil05/anat/sub-nottwil05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-nottwil05/anat/sub-nottwil05_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-nottwil05/anat/{sub-nottwil05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-nottwil05_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-nottwil05/anat/sub-nottwil05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json delete mode 100644 derivatives/labels/sub-nottwil05/anat/sub-nottwil05_space-other_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-nottwil06/anat/{sub-nottwil06_space-other_T1w_label-discs_dlabel.json => sub-nottwil06_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-nottwil06/anat/{sub-nottwil06_space-other_T1w_label-discs_dlabel.nii.gz => sub-nottwil06_T1w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-nottwil06/anat/sub-nottwil06_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-nottwil06/anat/{sub-nottwil06_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz => sub-nottwil06_T2star_label-discs_desc-warp_dlabel.nii.gz} (100%) rename derivatives/labels/sub-nottwil06/anat/{sub-nottwil06_space-other_T2w_label-discs_dlabel.json => sub-nottwil06_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-nottwil06/anat/{sub-nottwil06_space-other_T2w_label-discs_dlabel.nii.gz => sub-nottwil06_T2w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-nottwil06/anat/sub-nottwil06_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-nottwil06/anat/{sub-nottwil06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-nottwil06_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-nottwil06/anat/sub-nottwil06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-nottwil06/anat/sub-nottwil06_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-nottwil06/anat/{sub-nottwil06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-nottwil06_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-nottwil06/anat/sub-nottwil06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json delete mode 100644 derivatives/labels/sub-nottwil06/anat/sub-nottwil06_space-other_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-nwu01/anat/{sub-nwu01_space-other_T1w_label-discs_dlabel.json => sub-nwu01_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-nwu01/anat/{sub-nwu01_space-other_T1w_label-discs_dlabel.nii.gz => sub-nwu01_T1w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-nwu01/anat/sub-nwu01_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-nwu01/anat/{sub-nwu01_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz => sub-nwu01_T2star_label-discs_desc-warp_dlabel.nii.gz} (100%) rename derivatives/labels/sub-nwu01/anat/{sub-nwu01_space-other_T2w_label-discs_dlabel.json => sub-nwu01_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-nwu01/anat/{sub-nwu01_space-other_T2w_label-discs_dlabel.nii.gz => sub-nwu01_T2w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-nwu01/anat/sub-nwu01_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-nwu01/anat/{sub-nwu01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-nwu01_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-nwu01/anat/sub-nwu01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-nwu01/anat/sub-nwu01_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-nwu01/anat/{sub-nwu01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-nwu01_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-nwu01/anat/sub-nwu01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json delete mode 100644 derivatives/labels/sub-nwu01/anat/sub-nwu01_space-other_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-nwu02/anat/{sub-nwu02_space-other_T1w_label-discs_dlabel.json => sub-nwu02_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-nwu02/anat/{sub-nwu02_space-other_T1w_label-discs_dlabel.nii.gz => sub-nwu02_T1w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-nwu02/anat/sub-nwu02_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-nwu02/anat/{sub-nwu02_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz => sub-nwu02_T2star_label-discs_desc-warp_dlabel.nii.gz} (100%) rename derivatives/labels/sub-nwu02/anat/{sub-nwu02_space-other_T2w_label-discs_dlabel.json => sub-nwu02_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-nwu02/anat/{sub-nwu02_space-other_T2w_label-discs_dlabel.nii.gz => sub-nwu02_T2w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-nwu02/anat/sub-nwu02_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-nwu02/anat/{sub-nwu02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-nwu02_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-nwu02/anat/sub-nwu02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-nwu02/anat/sub-nwu02_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-nwu02/anat/{sub-nwu02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-nwu02_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-nwu02/anat/sub-nwu02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json delete mode 100644 derivatives/labels/sub-nwu02/anat/sub-nwu02_space-other_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-nwu03/anat/{sub-nwu03_space-other_T1w_label-discs_dlabel.json => sub-nwu03_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-nwu03/anat/{sub-nwu03_space-other_T1w_label-discs_dlabel.nii.gz => sub-nwu03_T1w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-nwu03/anat/sub-nwu03_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-nwu03/anat/{sub-nwu03_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz => sub-nwu03_T2star_label-discs_desc-warp_dlabel.nii.gz} (100%) rename derivatives/labels/sub-nwu03/anat/{sub-nwu03_space-other_T2w_label-discs_dlabel.json => sub-nwu03_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-nwu03/anat/{sub-nwu03_space-other_T2w_label-discs_dlabel.nii.gz => sub-nwu03_T2w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-nwu03/anat/sub-nwu03_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-nwu03/anat/{sub-nwu03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-nwu03_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-nwu03/anat/sub-nwu03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-nwu03/anat/sub-nwu03_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-nwu03/anat/{sub-nwu03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-nwu03_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-nwu03/anat/sub-nwu03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json delete mode 100644 derivatives/labels/sub-nwu03/anat/sub-nwu03_space-other_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-nwu04/anat/{sub-nwu04_space-other_T1w_label-discs_dlabel.json => sub-nwu04_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-nwu04/anat/{sub-nwu04_space-other_T1w_label-discs_dlabel.nii.gz => sub-nwu04_T1w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-nwu04/anat/sub-nwu04_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-nwu04/anat/{sub-nwu04_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz => sub-nwu04_T2star_label-discs_desc-warp_dlabel.nii.gz} (100%) rename derivatives/labels/sub-nwu04/anat/{sub-nwu04_space-other_T2w_label-discs_dlabel.json => sub-nwu04_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-nwu04/anat/{sub-nwu04_space-other_T2w_label-discs_dlabel.nii.gz => sub-nwu04_T2w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-nwu04/anat/sub-nwu04_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-nwu04/anat/{sub-nwu04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-nwu04_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-nwu04/anat/sub-nwu04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-nwu04/anat/sub-nwu04_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-nwu04/anat/{sub-nwu04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-nwu04_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-nwu04/anat/sub-nwu04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json delete mode 100644 derivatives/labels/sub-nwu04/anat/sub-nwu04_space-other_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-nwu05/anat/{sub-nwu05_space-other_T1w_label-discs_dlabel.json => sub-nwu05_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-nwu05/anat/{sub-nwu05_space-other_T1w_label-discs_dlabel.nii.gz => sub-nwu05_T1w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-nwu05/anat/sub-nwu05_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-nwu05/anat/{sub-nwu05_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz => sub-nwu05_T2star_label-discs_desc-warp_dlabel.nii.gz} (100%) rename derivatives/labels/sub-nwu05/anat/{sub-nwu05_space-other_T2w_label-discs_dlabel.json => sub-nwu05_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-nwu05/anat/{sub-nwu05_space-other_T2w_label-discs_dlabel.nii.gz => sub-nwu05_T2w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-nwu05/anat/sub-nwu05_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-nwu05/anat/{sub-nwu05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-nwu05_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-nwu05/anat/sub-nwu05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-nwu05/anat/sub-nwu05_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-nwu05/anat/{sub-nwu05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-nwu05_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-nwu05/anat/sub-nwu05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json delete mode 100644 derivatives/labels/sub-nwu05/anat/sub-nwu05_space-other_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-nwu06/anat/{sub-nwu06_space-other_T1w_label-discs_dlabel.json => sub-nwu06_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-nwu06/anat/{sub-nwu06_space-other_T1w_label-discs_dlabel.nii.gz => sub-nwu06_T1w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-nwu06/anat/sub-nwu06_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-nwu06/anat/{sub-nwu06_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz => sub-nwu06_T2star_label-discs_desc-warp_dlabel.nii.gz} (100%) rename derivatives/labels/sub-nwu06/anat/{sub-nwu06_space-other_T2w_label-discs_dlabel.json => sub-nwu06_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-nwu06/anat/{sub-nwu06_space-other_T2w_label-discs_dlabel.nii.gz => sub-nwu06_T2w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-nwu06/anat/sub-nwu06_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-nwu06/anat/{sub-nwu06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-nwu06_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-nwu06/anat/sub-nwu06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-nwu06/anat/sub-nwu06_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-nwu06/anat/{sub-nwu06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-nwu06_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-nwu06/anat/sub-nwu06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json delete mode 100644 derivatives/labels/sub-nwu06/anat/sub-nwu06_space-other_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-oxfordFmrib01/anat/{sub-oxfordFmrib01_space-other_T1w_label-discs_dlabel.json => sub-oxfordFmrib01_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-oxfordFmrib01/anat/{sub-oxfordFmrib01_space-other_T1w_label-discs_dlabel.nii.gz => sub-oxfordFmrib01_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-oxfordFmrib01/anat/{sub-oxfordFmrib01_space-other_T2w_label-discs_dlabel.json => sub-oxfordFmrib01_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-oxfordFmrib01/anat/{sub-oxfordFmrib01_space-other_T2w_label-discs_dlabel.nii.gz => sub-oxfordFmrib01_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-oxfordFmrib02/anat/{sub-oxfordFmrib02_space-other_T1w_label-discs_dlabel.json => sub-oxfordFmrib02_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-oxfordFmrib02/anat/{sub-oxfordFmrib02_space-other_T1w_label-discs_dlabel.nii.gz => sub-oxfordFmrib02_T1w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-oxfordFmrib02/anat/sub-oxfordFmrib02_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-oxfordFmrib02/anat/{sub-oxfordFmrib02_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz => sub-oxfordFmrib02_T2star_label-discs_desc-warp_dlabel.nii.gz} (100%) rename derivatives/labels/sub-oxfordFmrib02/anat/{sub-oxfordFmrib02_space-other_T2w_label-discs_dlabel.json => sub-oxfordFmrib02_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-oxfordFmrib02/anat/{sub-oxfordFmrib02_space-other_T2w_label-discs_dlabel.nii.gz => sub-oxfordFmrib02_T2w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-oxfordFmrib02/anat/sub-oxfordFmrib02_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-oxfordFmrib02/anat/{sub-oxfordFmrib02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-oxfordFmrib02_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-oxfordFmrib02/anat/sub-oxfordFmrib02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-oxfordFmrib02/anat/sub-oxfordFmrib02_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-oxfordFmrib02/anat/{sub-oxfordFmrib02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-oxfordFmrib02_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-oxfordFmrib02/anat/sub-oxfordFmrib02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json delete mode 100644 derivatives/labels/sub-oxfordFmrib02/anat/sub-oxfordFmrib02_space-other_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-oxfordFmrib03/anat/{sub-oxfordFmrib03_space-other_T1w_label-discs_dlabel.json => sub-oxfordFmrib03_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-oxfordFmrib03/anat/{sub-oxfordFmrib03_space-other_T1w_label-discs_dlabel.nii.gz => sub-oxfordFmrib03_T1w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-oxfordFmrib03/anat/sub-oxfordFmrib03_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-oxfordFmrib03/anat/{sub-oxfordFmrib03_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz => sub-oxfordFmrib03_T2star_label-discs_desc-warp_dlabel.nii.gz} (100%) rename derivatives/labels/sub-oxfordFmrib03/anat/{sub-oxfordFmrib03_space-other_T2w_label-discs_dlabel.json => sub-oxfordFmrib03_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-oxfordFmrib03/anat/{sub-oxfordFmrib03_space-other_T2w_label-discs_dlabel.nii.gz => sub-oxfordFmrib03_T2w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-oxfordFmrib03/anat/sub-oxfordFmrib03_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-oxfordFmrib03/anat/{sub-oxfordFmrib03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-oxfordFmrib03_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-oxfordFmrib03/anat/sub-oxfordFmrib03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-oxfordFmrib03/anat/sub-oxfordFmrib03_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-oxfordFmrib03/anat/{sub-oxfordFmrib03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-oxfordFmrib03_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-oxfordFmrib03/anat/sub-oxfordFmrib03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-oxfordFmrib03/anat/sub-oxfordFmrib03_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.json rename derivatives/labels/sub-oxfordFmrib03/anat/{sub-oxfordFmrib03_space-other_T1w_RPI_r_labels-manual.nii.gz => sub-oxfordFmrib03_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-oxfordFmrib03/anat/sub-oxfordFmrib03_space-other_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-oxfordFmrib04/anat/{sub-oxfordFmrib04_space-other_T1w_label-discs_dlabel.json => sub-oxfordFmrib04_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-oxfordFmrib04/anat/{sub-oxfordFmrib04_space-other_T1w_label-discs_dlabel.nii.gz => sub-oxfordFmrib04_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-oxfordFmrib04/anat/{sub-oxfordFmrib04_space-other_T2w_label-discs_dlabel.json => sub-oxfordFmrib04_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-oxfordFmrib04/anat/{sub-oxfordFmrib04_space-other_T2w_label-discs_dlabel.nii.gz => sub-oxfordFmrib04_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-oxfordFmrib05/anat/{sub-oxfordFmrib05_space-other_T1w_label-discs_dlabel.json => sub-oxfordFmrib05_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-oxfordFmrib05/anat/{sub-oxfordFmrib05_space-other_T1w_label-discs_dlabel.nii.gz => sub-oxfordFmrib05_T1w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-oxfordFmrib05/anat/sub-oxfordFmrib05_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-oxfordFmrib05/anat/{sub-oxfordFmrib05_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz => sub-oxfordFmrib05_T2star_label-discs_desc-warp_dlabel.nii.gz} (100%) rename derivatives/labels/sub-oxfordFmrib05/anat/{sub-oxfordFmrib05_space-other_T2w_label-discs_dlabel.json => sub-oxfordFmrib05_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-oxfordFmrib05/anat/{sub-oxfordFmrib05_space-other_T2w_label-discs_dlabel.nii.gz => sub-oxfordFmrib05_T2w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-oxfordFmrib05/anat/sub-oxfordFmrib05_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-oxfordFmrib05/anat/{sub-oxfordFmrib05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-oxfordFmrib05_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-oxfordFmrib05/anat/sub-oxfordFmrib05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-oxfordFmrib05/anat/sub-oxfordFmrib05_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-oxfordFmrib05/anat/{sub-oxfordFmrib05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-oxfordFmrib05_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-oxfordFmrib05/anat/sub-oxfordFmrib05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-oxfordFmrib05/anat/sub-oxfordFmrib05_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.json rename derivatives/labels/sub-oxfordFmrib05/anat/{sub-oxfordFmrib05_space-other_T1w_RPI_r_labels-manual.nii.gz => sub-oxfordFmrib05_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-oxfordFmrib05/anat/sub-oxfordFmrib05_space-other_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-oxfordFmrib06/anat/{sub-oxfordFmrib06_space-other_T1w_label-discs_dlabel.json => sub-oxfordFmrib06_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-oxfordFmrib06/anat/{sub-oxfordFmrib06_space-other_T1w_label-discs_dlabel.nii.gz => sub-oxfordFmrib06_T1w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-oxfordFmrib06/anat/sub-oxfordFmrib06_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-oxfordFmrib06/anat/{sub-oxfordFmrib06_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz => sub-oxfordFmrib06_T2star_label-discs_desc-warp_dlabel.nii.gz} (100%) rename derivatives/labels/sub-oxfordFmrib06/anat/{sub-oxfordFmrib06_space-other_T2w_label-discs_dlabel.json => sub-oxfordFmrib06_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-oxfordFmrib06/anat/{sub-oxfordFmrib06_space-other_T2w_label-discs_dlabel.nii.gz => sub-oxfordFmrib06_T2w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-oxfordFmrib06/anat/sub-oxfordFmrib06_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-oxfordFmrib06/anat/{sub-oxfordFmrib06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-oxfordFmrib06_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-oxfordFmrib06/anat/sub-oxfordFmrib06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-oxfordFmrib06/anat/sub-oxfordFmrib06_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-oxfordFmrib06/anat/{sub-oxfordFmrib06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-oxfordFmrib06_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-oxfordFmrib06/anat/sub-oxfordFmrib06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-oxfordFmrib06/anat/sub-oxfordFmrib06_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.json rename derivatives/labels/sub-oxfordFmrib06/anat/{sub-oxfordFmrib06_space-other_T1w_RPI_r_labels-manual.nii.gz => sub-oxfordFmrib06_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-oxfordFmrib06/anat/sub-oxfordFmrib06_space-other_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-oxfordFmrib07/anat/{sub-oxfordFmrib07_space-other_T1w_label-discs_dlabel.json => sub-oxfordFmrib07_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-oxfordFmrib07/anat/{sub-oxfordFmrib07_space-other_T1w_label-discs_dlabel.nii.gz => sub-oxfordFmrib07_T1w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-oxfordFmrib07/anat/sub-oxfordFmrib07_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-oxfordFmrib07/anat/{sub-oxfordFmrib07_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz => sub-oxfordFmrib07_T2star_label-discs_desc-warp_dlabel.nii.gz} (100%) rename derivatives/labels/sub-oxfordFmrib07/anat/{sub-oxfordFmrib07_space-other_T2w_label-discs_dlabel.json => sub-oxfordFmrib07_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-oxfordFmrib07/anat/{sub-oxfordFmrib07_space-other_T2w_label-discs_dlabel.nii.gz => sub-oxfordFmrib07_T2w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-oxfordFmrib07/anat/sub-oxfordFmrib07_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-oxfordFmrib07/anat/{sub-oxfordFmrib07_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-oxfordFmrib07_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-oxfordFmrib07/anat/sub-oxfordFmrib07_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-oxfordFmrib07/anat/sub-oxfordFmrib07_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-oxfordFmrib07/anat/{sub-oxfordFmrib07_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-oxfordFmrib07_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-oxfordFmrib07/anat/sub-oxfordFmrib07_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-oxfordFmrib07/anat/sub-oxfordFmrib07_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.json rename derivatives/labels/sub-oxfordFmrib07/anat/{sub-oxfordFmrib07_space-other_T1w_RPI_r_labels-manual.nii.gz => sub-oxfordFmrib07_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-oxfordFmrib07/anat/sub-oxfordFmrib07_space-other_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-oxfordFmrib08/anat/{sub-oxfordFmrib08_space-other_T1w_label-discs_dlabel.json => sub-oxfordFmrib08_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-oxfordFmrib08/anat/{sub-oxfordFmrib08_space-other_T1w_label-discs_dlabel.nii.gz => sub-oxfordFmrib08_T1w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-oxfordFmrib08/anat/sub-oxfordFmrib08_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-oxfordFmrib08/anat/{sub-oxfordFmrib08_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz => sub-oxfordFmrib08_T2star_label-discs_desc-warp_dlabel.nii.gz} (100%) rename derivatives/labels/sub-oxfordFmrib08/anat/{sub-oxfordFmrib08_space-other_T2w_label-discs_dlabel.json => sub-oxfordFmrib08_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-oxfordFmrib08/anat/{sub-oxfordFmrib08_space-other_T2w_label-discs_dlabel.nii.gz => sub-oxfordFmrib08_T2w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-oxfordFmrib08/anat/sub-oxfordFmrib08_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-oxfordFmrib08/anat/{sub-oxfordFmrib08_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-oxfordFmrib08_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-oxfordFmrib08/anat/sub-oxfordFmrib08_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-oxfordFmrib08/anat/sub-oxfordFmrib08_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-oxfordFmrib08/anat/{sub-oxfordFmrib08_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-oxfordFmrib08_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-oxfordFmrib08/anat/sub-oxfordFmrib08_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json delete mode 100644 derivatives/labels/sub-oxfordFmrib08/anat/sub-oxfordFmrib08_space-other_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-oxfordFmrib09/anat/{sub-oxfordFmrib09_space-other_T1w_label-discs_dlabel.json => sub-oxfordFmrib09_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-oxfordFmrib09/anat/{sub-oxfordFmrib09_space-other_T1w_label-discs_dlabel.nii.gz => sub-oxfordFmrib09_T1w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-oxfordFmrib09/anat/sub-oxfordFmrib09_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-oxfordFmrib09/anat/{sub-oxfordFmrib09_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz => sub-oxfordFmrib09_T2star_label-discs_desc-warp_dlabel.nii.gz} (100%) rename derivatives/labels/sub-oxfordFmrib09/anat/{sub-oxfordFmrib09_space-other_T2w_label-discs_dlabel.json => sub-oxfordFmrib09_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-oxfordFmrib09/anat/{sub-oxfordFmrib09_space-other_T2w_label-discs_dlabel.nii.gz => sub-oxfordFmrib09_T2w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-oxfordFmrib09/anat/sub-oxfordFmrib09_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-oxfordFmrib09/anat/{sub-oxfordFmrib09_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-oxfordFmrib09_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-oxfordFmrib09/anat/sub-oxfordFmrib09_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-oxfordFmrib09/anat/sub-oxfordFmrib09_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-oxfordFmrib09/anat/{sub-oxfordFmrib09_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-oxfordFmrib09_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-oxfordFmrib09/anat/sub-oxfordFmrib09_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json delete mode 100644 derivatives/labels/sub-oxfordFmrib09/anat/sub-oxfordFmrib09_space-other_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-oxfordFmrib10/anat/{sub-oxfordFmrib10_space-other_T1w_label-discs_dlabel.json => sub-oxfordFmrib10_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-oxfordFmrib10/anat/{sub-oxfordFmrib10_space-other_T1w_label-discs_dlabel.nii.gz => sub-oxfordFmrib10_T1w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-oxfordFmrib10/anat/sub-oxfordFmrib10_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-oxfordFmrib10/anat/{sub-oxfordFmrib10_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz => sub-oxfordFmrib10_T2star_label-discs_desc-warp_dlabel.nii.gz} (100%) rename derivatives/labels/sub-oxfordFmrib10/anat/{sub-oxfordFmrib10_space-other_T2w_label-discs_dlabel.json => sub-oxfordFmrib10_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-oxfordFmrib10/anat/{sub-oxfordFmrib10_space-other_T2w_label-discs_dlabel.nii.gz => sub-oxfordFmrib10_T2w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-oxfordFmrib10/anat/sub-oxfordFmrib10_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-oxfordFmrib10/anat/{sub-oxfordFmrib10_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-oxfordFmrib10_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-oxfordFmrib10/anat/sub-oxfordFmrib10_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-oxfordFmrib10/anat/sub-oxfordFmrib10_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-oxfordFmrib10/anat/{sub-oxfordFmrib10_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-oxfordFmrib10_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-oxfordFmrib10/anat/sub-oxfordFmrib10_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json delete mode 100644 derivatives/labels/sub-oxfordFmrib10/anat/sub-oxfordFmrib10_space-other_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-oxfordFmrib11/anat/{sub-oxfordFmrib11_space-other_T1w_label-discs_dlabel.json => sub-oxfordFmrib11_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-oxfordFmrib11/anat/{sub-oxfordFmrib11_space-other_T1w_label-discs_dlabel.nii.gz => sub-oxfordFmrib11_T1w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-oxfordFmrib11/anat/sub-oxfordFmrib11_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-oxfordFmrib11/anat/{sub-oxfordFmrib11_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz => sub-oxfordFmrib11_T2star_label-discs_desc-warp_dlabel.nii.gz} (100%) rename derivatives/labels/sub-oxfordFmrib11/anat/{sub-oxfordFmrib11_space-other_T2w_label-discs_dlabel.json => sub-oxfordFmrib11_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-oxfordFmrib11/anat/{sub-oxfordFmrib11_space-other_T2w_label-discs_dlabel.nii.gz => sub-oxfordFmrib11_T2w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-oxfordFmrib11/anat/sub-oxfordFmrib11_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-oxfordFmrib11/anat/{sub-oxfordFmrib11_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-oxfordFmrib11_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-oxfordFmrib11/anat/sub-oxfordFmrib11_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-oxfordFmrib11/anat/sub-oxfordFmrib11_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-oxfordFmrib11/anat/{sub-oxfordFmrib11_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-oxfordFmrib11_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-oxfordFmrib11/anat/sub-oxfordFmrib11_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json delete mode 100644 derivatives/labels/sub-oxfordFmrib11/anat/sub-oxfordFmrib11_space-other_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-oxfordOhba01/anat/{sub-oxfordOhba01_space-other_T1w_label-discs_dlabel.json => sub-oxfordOhba01_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-oxfordOhba01/anat/{sub-oxfordOhba01_space-other_T1w_label-discs_dlabel.nii.gz => sub-oxfordOhba01_T1w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-oxfordOhba01/anat/sub-oxfordOhba01_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-oxfordOhba01/anat/{sub-oxfordOhba01_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz => sub-oxfordOhba01_T2star_label-discs_desc-warp_dlabel.nii.gz} (100%) rename derivatives/labels/sub-oxfordOhba01/anat/{sub-oxfordOhba01_space-other_T2w_label-discs_dlabel.json => sub-oxfordOhba01_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-oxfordOhba01/anat/{sub-oxfordOhba01_space-other_T2w_label-discs_dlabel.nii.gz => sub-oxfordOhba01_T2w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-oxfordOhba01/anat/sub-oxfordOhba01_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-oxfordOhba01/anat/{sub-oxfordOhba01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-oxfordOhba01_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-oxfordOhba01/anat/sub-oxfordOhba01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-oxfordOhba01/anat/sub-oxfordOhba01_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-oxfordOhba01/anat/{sub-oxfordOhba01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-oxfordOhba01_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-oxfordOhba01/anat/sub-oxfordOhba01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json delete mode 100644 derivatives/labels/sub-oxfordOhba01/anat/sub-oxfordOhba01_space-other_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-oxfordOhba02/anat/{sub-oxfordOhba02_space-other_T1w_label-discs_dlabel.json => sub-oxfordOhba02_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-oxfordOhba02/anat/{sub-oxfordOhba02_space-other_T1w_label-discs_dlabel.nii.gz => sub-oxfordOhba02_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-oxfordOhba02/anat/{sub-oxfordOhba02_space-other_T2w_label-discs_dlabel.json => sub-oxfordOhba02_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-oxfordOhba02/anat/{sub-oxfordOhba02_space-other_T2w_label-discs_dlabel.nii.gz => sub-oxfordOhba02_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-oxfordOhba03/anat/{sub-oxfordOhba03_space-other_T1w_label-discs_dlabel.json => sub-oxfordOhba03_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-oxfordOhba03/anat/{sub-oxfordOhba03_space-other_T1w_label-discs_dlabel.nii.gz => sub-oxfordOhba03_T1w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-oxfordOhba03/anat/sub-oxfordOhba03_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-oxfordOhba03/anat/{sub-oxfordOhba03_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz => sub-oxfordOhba03_T2star_label-discs_desc-warp_dlabel.nii.gz} (100%) rename derivatives/labels/sub-oxfordOhba03/anat/{sub-oxfordOhba03_space-other_T2w_label-discs_dlabel.json => sub-oxfordOhba03_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-oxfordOhba03/anat/{sub-oxfordOhba03_space-other_T2w_label-discs_dlabel.nii.gz => sub-oxfordOhba03_T2w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-oxfordOhba03/anat/sub-oxfordOhba03_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-oxfordOhba03/anat/{sub-oxfordOhba03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-oxfordOhba03_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-oxfordOhba03/anat/sub-oxfordOhba03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-oxfordOhba03/anat/sub-oxfordOhba03_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-oxfordOhba03/anat/{sub-oxfordOhba03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-oxfordOhba03_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-oxfordOhba03/anat/sub-oxfordOhba03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json delete mode 100644 derivatives/labels/sub-oxfordOhba03/anat/sub-oxfordOhba03_space-other_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-oxfordOhba04/anat/{sub-oxfordOhba04_space-other_T1w_label-discs_dlabel.json => sub-oxfordOhba04_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-oxfordOhba04/anat/{sub-oxfordOhba04_space-other_T1w_label-discs_dlabel.nii.gz => sub-oxfordOhba04_T1w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-oxfordOhba04/anat/sub-oxfordOhba04_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-oxfordOhba04/anat/{sub-oxfordOhba04_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz => sub-oxfordOhba04_T2star_label-discs_desc-warp_dlabel.nii.gz} (100%) rename derivatives/labels/sub-oxfordOhba04/anat/{sub-oxfordOhba04_space-other_T2w_label-discs_dlabel.json => sub-oxfordOhba04_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-oxfordOhba04/anat/{sub-oxfordOhba04_space-other_T2w_label-discs_dlabel.nii.gz => sub-oxfordOhba04_T2w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-oxfordOhba04/anat/sub-oxfordOhba04_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-oxfordOhba04/anat/{sub-oxfordOhba04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-oxfordOhba04_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-oxfordOhba04/anat/sub-oxfordOhba04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-oxfordOhba04/anat/sub-oxfordOhba04_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-oxfordOhba04/anat/{sub-oxfordOhba04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-oxfordOhba04_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-oxfordOhba04/anat/sub-oxfordOhba04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json delete mode 100644 derivatives/labels/sub-oxfordOhba04/anat/sub-oxfordOhba04_space-other_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-oxfordOhba05/anat/{sub-oxfordOhba05_space-other_T1w_label-discs_dlabel.json => sub-oxfordOhba05_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-oxfordOhba05/anat/{sub-oxfordOhba05_space-other_T1w_label-discs_dlabel.nii.gz => sub-oxfordOhba05_T1w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-oxfordOhba05/anat/sub-oxfordOhba05_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-oxfordOhba05/anat/{sub-oxfordOhba05_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz => sub-oxfordOhba05_T2star_label-discs_desc-warp_dlabel.nii.gz} (100%) rename derivatives/labels/sub-oxfordOhba05/anat/{sub-oxfordOhba05_space-other_T2w_label-discs_dlabel.json => sub-oxfordOhba05_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-oxfordOhba05/anat/{sub-oxfordOhba05_space-other_T2w_label-discs_dlabel.nii.gz => sub-oxfordOhba05_T2w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-oxfordOhba05/anat/sub-oxfordOhba05_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-oxfordOhba05/anat/{sub-oxfordOhba05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-oxfordOhba05_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-oxfordOhba05/anat/sub-oxfordOhba05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-oxfordOhba05/anat/sub-oxfordOhba05_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-oxfordOhba05/anat/{sub-oxfordOhba05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-oxfordOhba05_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-oxfordOhba05/anat/sub-oxfordOhba05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-oxfordOhba05/anat/sub-oxfordOhba05_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.json rename derivatives/labels/sub-oxfordOhba05/anat/{sub-oxfordOhba05_space-other_T1w_RPI_r_labels-manual.nii.gz => sub-oxfordOhba05_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-oxfordOhba05/anat/sub-oxfordOhba05_space-other_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-pavia01/anat/{sub-pavia01_space-other_T1w_label-discs_dlabel.json => sub-pavia01_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-pavia01/anat/{sub-pavia01_space-other_T1w_label-discs_dlabel.nii.gz => sub-pavia01_T1w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-pavia01/anat/sub-pavia01_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-pavia01/anat/{sub-pavia01_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz => sub-pavia01_T2star_label-discs_desc-warp_dlabel.nii.gz} (100%) rename derivatives/labels/sub-pavia01/anat/{sub-pavia01_space-other_T2w_label-discs_dlabel.json => sub-pavia01_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-pavia01/anat/{sub-pavia01_space-other_T2w_label-discs_dlabel.nii.gz => sub-pavia01_T2w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-pavia01/anat/sub-pavia01_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-pavia01/anat/{sub-pavia01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-pavia01_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-pavia01/anat/sub-pavia01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-pavia01/anat/sub-pavia01_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-pavia01/anat/{sub-pavia01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-pavia01_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-pavia01/anat/sub-pavia01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json delete mode 100644 derivatives/labels/sub-pavia01/anat/sub-pavia01_space-other_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-pavia02/anat/{sub-pavia02_space-other_T1w_label-discs_dlabel.json => sub-pavia02_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-pavia02/anat/{sub-pavia02_space-other_T1w_label-discs_dlabel.nii.gz => sub-pavia02_T1w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-pavia02/anat/sub-pavia02_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-pavia02/anat/{sub-pavia02_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz => sub-pavia02_T2star_label-discs_desc-warp_dlabel.nii.gz} (100%) rename derivatives/labels/sub-pavia02/anat/{sub-pavia02_space-other_T2w_label-discs_dlabel.json => sub-pavia02_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-pavia02/anat/{sub-pavia02_space-other_T2w_label-discs_dlabel.nii.gz => sub-pavia02_T2w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-pavia02/anat/sub-pavia02_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-pavia02/anat/{sub-pavia02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-pavia02_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-pavia02/anat/sub-pavia02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-pavia02/anat/sub-pavia02_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-pavia02/anat/{sub-pavia02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-pavia02_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-pavia02/anat/sub-pavia02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json delete mode 100644 derivatives/labels/sub-pavia02/anat/sub-pavia02_space-other_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-pavia03/anat/{sub-pavia03_space-other_T1w_label-discs_dlabel.json => sub-pavia03_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-pavia03/anat/{sub-pavia03_space-other_T1w_label-discs_dlabel.nii.gz => sub-pavia03_T1w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-pavia03/anat/sub-pavia03_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-pavia03/anat/{sub-pavia03_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz => sub-pavia03_T2star_label-discs_desc-warp_dlabel.nii.gz} (100%) rename derivatives/labels/sub-pavia03/anat/{sub-pavia03_space-other_T2w_label-discs_dlabel.json => sub-pavia03_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-pavia03/anat/{sub-pavia03_space-other_T2w_label-discs_dlabel.nii.gz => sub-pavia03_T2w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-pavia03/anat/sub-pavia03_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-pavia03/anat/{sub-pavia03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-pavia03_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-pavia03/anat/sub-pavia03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-pavia03/anat/sub-pavia03_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-pavia03/anat/{sub-pavia03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-pavia03_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-pavia03/anat/sub-pavia03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-pavia03/anat/sub-pavia03_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.json rename derivatives/labels/sub-pavia03/anat/{sub-pavia03_space-other_T1w_RPI_r_labels-manual.nii.gz => sub-pavia03_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-pavia03/anat/sub-pavia03_space-other_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-pavia04/anat/{sub-pavia04_space-other_T1w_label-discs_dlabel.json => sub-pavia04_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-pavia04/anat/{sub-pavia04_space-other_T1w_label-discs_dlabel.nii.gz => sub-pavia04_T1w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-pavia04/anat/sub-pavia04_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-pavia04/anat/{sub-pavia04_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz => sub-pavia04_T2star_label-discs_desc-warp_dlabel.nii.gz} (100%) rename derivatives/labels/sub-pavia04/anat/{sub-pavia04_space-other_T2w_label-discs_dlabel.json => sub-pavia04_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-pavia04/anat/{sub-pavia04_space-other_T2w_label-discs_dlabel.nii.gz => sub-pavia04_T2w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-pavia04/anat/sub-pavia04_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-pavia04/anat/{sub-pavia04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-pavia04_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-pavia04/anat/sub-pavia04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-pavia04/anat/sub-pavia04_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-pavia04/anat/{sub-pavia04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-pavia04_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-pavia04/anat/sub-pavia04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json delete mode 100644 derivatives/labels/sub-pavia04/anat/sub-pavia04_space-other_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-pavia04/anat/{sub-pavia04_space-other_T2w_csflabel-SC_seg.json => sub-pavia04_space-other_T2w_label-CSF_seg.json} (100%) rename derivatives/labels/sub-pavia04/anat/{sub-pavia04_space-other_T2w_csflabel-SC_seg.nii.gz => sub-pavia04_space-other_T2w_label-CSF_seg.nii.gz} (100%) create mode 100644 derivatives/labels/sub-pavia04/anat/sub-pavia04_space-other_T2w_label-canal_seg.json create mode 100644 derivatives/labels/sub-pavia04/anat/sub-pavia04_space-other_T2w_label-canal_seg.nii.gz rename derivatives/labels/sub-pavia05/anat/{sub-pavia05_space-other_T1w_label-discs_dlabel.json => sub-pavia05_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-pavia05/anat/{sub-pavia05_space-other_T1w_label-discs_dlabel.nii.gz => sub-pavia05_T1w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-pavia05/anat/sub-pavia05_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-pavia05/anat/{sub-pavia05_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz => sub-pavia05_T2star_label-discs_desc-warp_dlabel.nii.gz} (100%) rename derivatives/labels/sub-pavia05/anat/{sub-pavia05_space-other_T2w_label-discs_dlabel.json => sub-pavia05_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-pavia05/anat/{sub-pavia05_space-other_T2w_label-discs_dlabel.nii.gz => sub-pavia05_T2w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-pavia05/anat/sub-pavia05_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-pavia05/anat/{sub-pavia05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-pavia05_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-pavia05/anat/sub-pavia05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-pavia05/anat/sub-pavia05_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-pavia05/anat/{sub-pavia05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-pavia05_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-pavia05/anat/sub-pavia05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json delete mode 100644 derivatives/labels/sub-pavia05/anat/sub-pavia05_space-other_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-pavia06/anat/{sub-pavia06_space-other_T1w_label-discs_dlabel.json => sub-pavia06_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-pavia06/anat/{sub-pavia06_space-other_T1w_label-discs_dlabel.nii.gz => sub-pavia06_T1w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-pavia06/anat/sub-pavia06_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-pavia06/anat/{sub-pavia06_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz => sub-pavia06_T2star_label-discs_desc-warp_dlabel.nii.gz} (100%) rename derivatives/labels/sub-pavia06/anat/{sub-pavia06_space-other_T2w_label-discs_dlabel.json => sub-pavia06_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-pavia06/anat/{sub-pavia06_space-other_T2w_label-discs_dlabel.nii.gz => sub-pavia06_T2w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-pavia06/anat/sub-pavia06_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-pavia06/anat/{sub-pavia06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-pavia06_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-pavia06/anat/sub-pavia06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-pavia06/anat/sub-pavia06_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-pavia06/anat/{sub-pavia06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-pavia06_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-pavia06/anat/sub-pavia06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json delete mode 100644 derivatives/labels/sub-pavia06/anat/sub-pavia06_space-other_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-perform01/anat/{sub-perform01_space-other_T1w_label-discs_dlabel.json => sub-perform01_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-perform01/anat/{sub-perform01_space-other_T1w_label-discs_dlabel.nii.gz => sub-perform01_T1w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-perform01/anat/sub-perform01_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-perform01/anat/{sub-perform01_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz => sub-perform01_T2star_label-discs_desc-warp_dlabel.nii.gz} (100%) rename derivatives/labels/sub-perform01/anat/{sub-perform01_space-other_T2w_label-discs_dlabel.json => sub-perform01_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-perform01/anat/{sub-perform01_space-other_T2w_label-discs_dlabel.nii.gz => sub-perform01_T2w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-perform01/anat/sub-perform01_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-perform01/anat/{sub-perform01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-perform01_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-perform01/anat/sub-perform01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-perform01/anat/sub-perform01_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-perform01/anat/{sub-perform01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-perform01_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-perform01/anat/sub-perform01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json delete mode 100644 derivatives/labels/sub-perform01/anat/sub-perform01_space-other_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-perform02/anat/{sub-perform02_space-other_T1w_label-discs_dlabel.json => sub-perform02_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-perform02/anat/{sub-perform02_space-other_T1w_label-discs_dlabel.nii.gz => sub-perform02_T1w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-perform02/anat/sub-perform02_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-perform02/anat/{sub-perform02_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz => sub-perform02_T2star_label-discs_desc-warp_dlabel.nii.gz} (100%) rename derivatives/labels/sub-perform02/anat/{sub-perform02_space-other_T2w_label-discs_dlabel.json => sub-perform02_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-perform02/anat/{sub-perform02_space-other_T2w_label-discs_dlabel.nii.gz => sub-perform02_T2w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-perform02/anat/sub-perform02_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-perform02/anat/{sub-perform02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-perform02_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-perform02/anat/sub-perform02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-perform02/anat/sub-perform02_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-perform02/anat/{sub-perform02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-perform02_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-perform02/anat/sub-perform02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json delete mode 100644 derivatives/labels/sub-perform02/anat/sub-perform02_space-other_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-perform02/anat/{sub-perform02_space-other_T2w_csflabel-SC_seg.json => sub-perform02_space-other_T2w_label-CSF_seg.json} (100%) rename derivatives/labels/sub-perform02/anat/{sub-perform02_space-other_T2w_csflabel-SC_seg.nii.gz => sub-perform02_space-other_T2w_label-CSF_seg.nii.gz} (100%) create mode 100644 derivatives/labels/sub-perform02/anat/sub-perform02_space-other_T2w_label-canal_seg.json create mode 100644 derivatives/labels/sub-perform02/anat/sub-perform02_space-other_T2w_label-canal_seg.nii.gz rename derivatives/labels/sub-perform03/anat/{sub-perform03_space-other_T1w_label-discs_dlabel.json => sub-perform03_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-perform03/anat/{sub-perform03_space-other_T1w_label-discs_dlabel.nii.gz => sub-perform03_T1w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-perform03/anat/sub-perform03_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-perform03/anat/{sub-perform03_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz => sub-perform03_T2star_label-discs_desc-warp_dlabel.nii.gz} (100%) rename derivatives/labels/sub-perform03/anat/{sub-perform03_space-other_T2w_label-discs_dlabel.json => sub-perform03_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-perform03/anat/{sub-perform03_space-other_T2w_label-discs_dlabel.nii.gz => sub-perform03_T2w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-perform03/anat/sub-perform03_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-perform03/anat/{sub-perform03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-perform03_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-perform03/anat/sub-perform03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-perform03/anat/sub-perform03_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-perform03/anat/{sub-perform03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-perform03_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-perform03/anat/sub-perform03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json delete mode 100644 derivatives/labels/sub-perform03/anat/sub-perform03_space-other_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-perform04/anat/{sub-perform04_space-other_T1w_label-discs_dlabel.json => sub-perform04_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-perform04/anat/{sub-perform04_space-other_T1w_label-discs_dlabel.nii.gz => sub-perform04_T1w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-perform04/anat/sub-perform04_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-perform04/anat/{sub-perform04_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz => sub-perform04_T2star_label-discs_desc-warp_dlabel.nii.gz} (100%) rename derivatives/labels/sub-perform04/anat/{sub-perform04_space-other_T2w_label-discs_dlabel.json => sub-perform04_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-perform04/anat/{sub-perform04_space-other_T2w_label-discs_dlabel.nii.gz => sub-perform04_T2w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-perform04/anat/sub-perform04_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-perform04/anat/{sub-perform04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-perform04_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-perform04/anat/sub-perform04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-perform04/anat/sub-perform04_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-perform04/anat/{sub-perform04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-perform04_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete 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sub-perform05_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-perform05/anat/{sub-perform05_space-other_T2w_label-discs_dlabel.nii.gz => sub-perform05_T2w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-perform05/anat/sub-perform05_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-perform05/anat/{sub-perform05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-perform05_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-perform05/anat/sub-perform05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-perform05/anat/sub-perform05_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-perform05/anat/{sub-perform05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-perform05_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-perform05/anat/sub-perform05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json delete mode 100644 derivatives/labels/sub-perform05/anat/sub-perform05_space-other_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-perform06/anat/{sub-perform06_space-other_T1w_label-discs_dlabel.json => sub-perform06_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-perform06/anat/{sub-perform06_space-other_T1w_label-discs_dlabel.nii.gz => sub-perform06_T1w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-perform06/anat/sub-perform06_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-perform06/anat/{sub-perform06_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz => sub-perform06_T2star_label-discs_desc-warp_dlabel.nii.gz} (100%) rename derivatives/labels/sub-perform06/anat/{sub-perform06_space-other_T2w_label-discs_dlabel.json => sub-perform06_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-perform06/anat/{sub-perform06_space-other_T2w_label-discs_dlabel.nii.gz => sub-perform06_T2w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-perform06/anat/sub-perform06_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-perform06/anat/{sub-perform06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-perform06_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-perform06/anat/sub-perform06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-perform06/anat/sub-perform06_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-perform06/anat/{sub-perform06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-perform06_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-perform06/anat/sub-perform06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-perform06/anat/sub-perform06_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.json rename derivatives/labels/sub-perform06/anat/{sub-perform06_space-other_T1w_RPI_r_labels-manual.nii.gz => sub-perform06_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-perform06/anat/sub-perform06_space-other_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-queensland01/anat/{sub-queensland01_space-other_T1w_label-discs_dlabel.json => sub-queensland01_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-queensland01/anat/{sub-queensland01_space-other_T1w_label-discs_dlabel.nii.gz => sub-queensland01_T1w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-queensland01/anat/sub-queensland01_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-queensland01/anat/{sub-queensland01_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz => sub-queensland01_T2star_label-discs_desc-warp_dlabel.nii.gz} (100%) rename derivatives/labels/sub-queensland01/anat/{sub-queensland01_space-other_T2w_label-discs_dlabel.json => sub-queensland01_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-queensland01/anat/{sub-queensland01_space-other_T2w_label-discs_dlabel.nii.gz => sub-queensland01_T2w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-queensland01/anat/sub-queensland01_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-queensland01/anat/{sub-queensland01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-queensland01_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-queensland01/anat/sub-queensland01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-queensland01/anat/sub-queensland01_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-queensland01/anat/{sub-queensland01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-queensland01_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-queensland01/anat/sub-queensland01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json delete mode 100644 derivatives/labels/sub-queensland01/anat/sub-queensland01_space-other_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-queensland02/anat/{sub-queensland02_space-other_T1w_label-discs_dlabel.json => sub-queensland02_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-queensland02/anat/{sub-queensland02_space-other_T1w_label-discs_dlabel.nii.gz => sub-queensland02_T1w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-queensland02/anat/sub-queensland02_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-queensland02/anat/{sub-queensland02_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz => sub-queensland02_T2star_label-discs_desc-warp_dlabel.nii.gz} (100%) rename derivatives/labels/sub-queensland02/anat/{sub-queensland02_space-other_T2w_label-discs_dlabel.json => sub-queensland02_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-queensland02/anat/{sub-queensland02_space-other_T2w_label-discs_dlabel.nii.gz => sub-queensland02_T2w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-queensland02/anat/sub-queensland02_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-queensland02/anat/{sub-queensland02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-queensland02_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-queensland02/anat/sub-queensland02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-queensland02/anat/sub-queensland02_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-queensland02/anat/{sub-queensland02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-queensland02_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-queensland02/anat/sub-queensland02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json delete mode 100644 derivatives/labels/sub-queensland02/anat/sub-queensland02_space-other_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-queensland03/anat/{sub-queensland03_space-other_T1w_label-discs_dlabel.json => sub-queensland03_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-queensland03/anat/{sub-queensland03_space-other_T1w_label-discs_dlabel.nii.gz => sub-queensland03_T1w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-queensland03/anat/sub-queensland03_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-queensland03/anat/{sub-queensland03_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz => sub-queensland03_T2star_label-discs_desc-warp_dlabel.nii.gz} (100%) rename derivatives/labels/sub-queensland03/anat/{sub-queensland03_space-other_T2w_label-discs_dlabel.json => sub-queensland03_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-queensland03/anat/{sub-queensland03_space-other_T2w_label-discs_dlabel.nii.gz => sub-queensland03_T2w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-queensland03/anat/sub-queensland03_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-queensland03/anat/{sub-queensland03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-queensland03_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-queensland03/anat/sub-queensland03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-queensland03/anat/sub-queensland03_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-queensland03/anat/{sub-queensland03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-queensland03_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-queensland03/anat/sub-queensland03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json delete mode 100644 derivatives/labels/sub-queensland03/anat/sub-queensland03_space-other_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-queensland04/anat/{sub-queensland04_space-other_T1w_label-discs_dlabel.json => sub-queensland04_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-queensland04/anat/{sub-queensland04_space-other_T1w_label-discs_dlabel.nii.gz => sub-queensland04_T1w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-queensland04/anat/sub-queensland04_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-queensland04/anat/{sub-queensland04_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz => sub-queensland04_T2star_label-discs_desc-warp_dlabel.nii.gz} (100%) rename derivatives/labels/sub-queensland04/anat/{sub-queensland04_space-other_T2w_label-discs_dlabel.json => sub-queensland04_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-queensland04/anat/{sub-queensland04_space-other_T2w_label-discs_dlabel.nii.gz => sub-queensland04_T2w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-queensland04/anat/sub-queensland04_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-queensland04/anat/{sub-queensland04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-queensland04_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-queensland04/anat/sub-queensland04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-queensland04/anat/sub-queensland04_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-queensland04/anat/{sub-queensland04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-queensland04_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 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sub-queensland05_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-queensland05/anat/{sub-queensland05_space-other_T2w_label-discs_dlabel.nii.gz => sub-queensland05_T2w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-queensland05/anat/sub-queensland05_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-queensland05/anat/{sub-queensland05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-queensland05_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-queensland05/anat/sub-queensland05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-queensland05/anat/sub-queensland05_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-queensland05/anat/{sub-queensland05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-queensland05_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-queensland05/anat/sub-queensland05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json delete mode 100644 derivatives/labels/sub-queensland05/anat/sub-queensland05_space-other_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-queensland06/anat/{sub-queensland06_space-other_T1w_label-discs_dlabel.json => sub-queensland06_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-queensland06/anat/{sub-queensland06_space-other_T1w_label-discs_dlabel.nii.gz => sub-queensland06_T1w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-queensland06/anat/sub-queensland06_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-queensland06/anat/{sub-queensland06_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz => sub-queensland06_T2star_label-discs_desc-warp_dlabel.nii.gz} (100%) rename derivatives/labels/sub-queensland06/anat/{sub-queensland06_space-other_T2w_label-discs_dlabel.json => sub-queensland06_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-queensland06/anat/{sub-queensland06_space-other_T2w_label-discs_dlabel.nii.gz => sub-queensland06_T2w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-queensland06/anat/sub-queensland06_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-queensland06/anat/{sub-queensland06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-queensland06_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-queensland06/anat/sub-queensland06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-queensland06/anat/sub-queensland06_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-queensland06/anat/{sub-queensland06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-queensland06_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-queensland06/anat/sub-queensland06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json delete mode 100644 derivatives/labels/sub-queensland06/anat/sub-queensland06_space-other_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-sherbrooke01/anat/{sub-sherbrooke01_space-other_T1w_label-discs_dlabel.json => sub-sherbrooke01_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-sherbrooke01/anat/{sub-sherbrooke01_space-other_T1w_label-discs_dlabel.nii.gz => sub-sherbrooke01_T1w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-sherbrooke01/anat/sub-sherbrooke01_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-sherbrooke01/anat/{sub-sherbrooke01_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz => sub-sherbrooke01_T2star_label-discs_desc-warp_dlabel.nii.gz} (100%) rename derivatives/labels/sub-sherbrooke01/anat/{sub-sherbrooke01_space-other_T2w_label-discs_dlabel.json => sub-sherbrooke01_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-sherbrooke01/anat/{sub-sherbrooke01_space-other_T2w_label-discs_dlabel.nii.gz => sub-sherbrooke01_T2w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-sherbrooke01/anat/sub-sherbrooke01_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-sherbrooke01/anat/{sub-sherbrooke01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-sherbrooke01_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-sherbrooke01/anat/sub-sherbrooke01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-sherbrooke01/anat/sub-sherbrooke01_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-sherbrooke01/anat/{sub-sherbrooke01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-sherbrooke01_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-sherbrooke01/anat/sub-sherbrooke01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json delete mode 100644 derivatives/labels/sub-sherbrooke01/anat/sub-sherbrooke01_space-other_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-sherbrooke02/anat/{sub-sherbrooke02_space-other_T1w_label-discs_dlabel.json => sub-sherbrooke02_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-sherbrooke02/anat/{sub-sherbrooke02_space-other_T1w_label-discs_dlabel.nii.gz => sub-sherbrooke02_T1w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-sherbrooke02/anat/sub-sherbrooke02_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-sherbrooke02/anat/{sub-sherbrooke02_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz => sub-sherbrooke02_T2star_label-discs_desc-warp_dlabel.nii.gz} (100%) rename derivatives/labels/sub-sherbrooke02/anat/{sub-sherbrooke02_space-other_T2w_label-discs_dlabel.json => sub-sherbrooke02_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-sherbrooke02/anat/{sub-sherbrooke02_space-other_T2w_label-discs_dlabel.nii.gz => sub-sherbrooke02_T2w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-sherbrooke02/anat/sub-sherbrooke02_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-sherbrooke02/anat/{sub-sherbrooke02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-sherbrooke02_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-sherbrooke02/anat/sub-sherbrooke02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-sherbrooke02/anat/sub-sherbrooke02_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-sherbrooke02/anat/{sub-sherbrooke02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-sherbrooke02_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-sherbrooke02/anat/sub-sherbrooke02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json delete mode 100644 derivatives/labels/sub-sherbrooke02/anat/sub-sherbrooke02_space-other_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-sherbrooke03/anat/{sub-sherbrooke03_space-other_T1w_label-discs_dlabel.json => sub-sherbrooke03_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-sherbrooke03/anat/{sub-sherbrooke03_space-other_T1w_label-discs_dlabel.nii.gz => sub-sherbrooke03_T1w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-sherbrooke03/anat/sub-sherbrooke03_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-sherbrooke03/anat/{sub-sherbrooke03_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz => sub-sherbrooke03_T2star_label-discs_desc-warp_dlabel.nii.gz} (100%) rename derivatives/labels/sub-sherbrooke03/anat/{sub-sherbrooke03_space-other_T2w_label-discs_dlabel.json => sub-sherbrooke03_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-sherbrooke03/anat/{sub-sherbrooke03_space-other_T2w_label-discs_dlabel.nii.gz => sub-sherbrooke03_T2w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-sherbrooke03/anat/sub-sherbrooke03_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-sherbrooke03/anat/{sub-sherbrooke03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-sherbrooke03_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-sherbrooke03/anat/sub-sherbrooke03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-sherbrooke03/anat/sub-sherbrooke03_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-sherbrooke03/anat/{sub-sherbrooke03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-sherbrooke03_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-sherbrooke03/anat/sub-sherbrooke03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json delete mode 100644 derivatives/labels/sub-sherbrooke03/anat/sub-sherbrooke03_space-other_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-sherbrooke04/anat/{sub-sherbrooke04_space-other_T1w_label-discs_dlabel.json => sub-sherbrooke04_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-sherbrooke04/anat/{sub-sherbrooke04_space-other_T1w_label-discs_dlabel.nii.gz => sub-sherbrooke04_T1w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-sherbrooke04/anat/sub-sherbrooke04_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-sherbrooke04/anat/{sub-sherbrooke04_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz => sub-sherbrooke04_T2star_label-discs_desc-warp_dlabel.nii.gz} (100%) rename derivatives/labels/sub-sherbrooke04/anat/{sub-sherbrooke04_space-other_T2w_label-discs_dlabel.json => sub-sherbrooke04_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-sherbrooke04/anat/{sub-sherbrooke04_space-other_T2w_label-discs_dlabel.nii.gz => sub-sherbrooke04_T2w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-sherbrooke04/anat/sub-sherbrooke04_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-sherbrooke04/anat/{sub-sherbrooke04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-sherbrooke04_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-sherbrooke04/anat/sub-sherbrooke04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-sherbrooke04/anat/sub-sherbrooke04_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-sherbrooke04/anat/{sub-sherbrooke04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-sherbrooke04_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-sherbrooke04/anat/sub-sherbrooke04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json delete mode 100644 derivatives/labels/sub-sherbrooke04/anat/sub-sherbrooke04_space-other_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-sherbrooke05/anat/{sub-sherbrooke05_space-other_T1w_label-discs_dlabel.json => sub-sherbrooke05_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-sherbrooke05/anat/{sub-sherbrooke05_space-other_T1w_label-discs_dlabel.nii.gz => sub-sherbrooke05_T1w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-sherbrooke05/anat/sub-sherbrooke05_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-sherbrooke05/anat/{sub-sherbrooke05_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz => sub-sherbrooke05_T2star_label-discs_desc-warp_dlabel.nii.gz} (100%) rename derivatives/labels/sub-sherbrooke05/anat/{sub-sherbrooke05_space-other_T2w_label-discs_dlabel.json => sub-sherbrooke05_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-sherbrooke05/anat/{sub-sherbrooke05_space-other_T2w_label-discs_dlabel.nii.gz => sub-sherbrooke05_T2w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-sherbrooke05/anat/sub-sherbrooke05_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-sherbrooke05/anat/{sub-sherbrooke05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-sherbrooke05_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-sherbrooke05/anat/sub-sherbrooke05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-sherbrooke05/anat/sub-sherbrooke05_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-sherbrooke05/anat/{sub-sherbrooke05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-sherbrooke05_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-sherbrooke05/anat/sub-sherbrooke05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json delete mode 100644 derivatives/labels/sub-sherbrooke05/anat/sub-sherbrooke05_space-other_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-sherbrooke06/anat/{sub-sherbrooke06_space-other_T1w_label-discs_dlabel.json => sub-sherbrooke06_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-sherbrooke06/anat/{sub-sherbrooke06_space-other_T1w_label-discs_dlabel.nii.gz => sub-sherbrooke06_T1w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-sherbrooke06/anat/sub-sherbrooke06_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-sherbrooke06/anat/{sub-sherbrooke06_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz => sub-sherbrooke06_T2star_label-discs_desc-warp_dlabel.nii.gz} (100%) rename derivatives/labels/sub-sherbrooke06/anat/{sub-sherbrooke06_space-other_T2w_label-discs_dlabel.json => sub-sherbrooke06_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-sherbrooke06/anat/{sub-sherbrooke06_space-other_T2w_label-discs_dlabel.nii.gz => sub-sherbrooke06_T2w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-sherbrooke06/anat/sub-sherbrooke06_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-sherbrooke06/anat/{sub-sherbrooke06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-sherbrooke06_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-sherbrooke06/anat/sub-sherbrooke06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-sherbrooke06/anat/sub-sherbrooke06_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-sherbrooke06/anat/{sub-sherbrooke06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-sherbrooke06_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-sherbrooke06/anat/sub-sherbrooke06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json delete mode 100644 derivatives/labels/sub-sherbrooke06/anat/sub-sherbrooke06_space-other_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-sherbrooke07/anat/{sub-sherbrooke07_space-other_T1w_label-discs_dlabel.json => sub-sherbrooke07_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-sherbrooke07/anat/{sub-sherbrooke07_space-other_T1w_label-discs_dlabel.nii.gz => sub-sherbrooke07_T1w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-sherbrooke07/anat/sub-sherbrooke07_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-sherbrooke07/anat/{sub-sherbrooke07_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz => sub-sherbrooke07_T2star_label-discs_desc-warp_dlabel.nii.gz} (100%) rename derivatives/labels/sub-sherbrooke07/anat/{sub-sherbrooke07_space-other_T2w_label-discs_dlabel.json => sub-sherbrooke07_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-sherbrooke07/anat/{sub-sherbrooke07_space-other_T2w_label-discs_dlabel.nii.gz => sub-sherbrooke07_T2w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-sherbrooke07/anat/sub-sherbrooke07_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-sherbrooke07/anat/{sub-sherbrooke07_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-sherbrooke07_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-sherbrooke07/anat/sub-sherbrooke07_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-sherbrooke07/anat/sub-sherbrooke07_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-sherbrooke07/anat/{sub-sherbrooke07_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-sherbrooke07_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-sherbrooke07/anat/sub-sherbrooke07_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json delete mode 100644 derivatives/labels/sub-sherbrooke07/anat/sub-sherbrooke07_space-other_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-stanford01/anat/{sub-stanford01_space-other_T1w_label-discs_dlabel.json => sub-stanford01_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-stanford01/anat/{sub-stanford01_space-other_T1w_label-discs_dlabel.nii.gz => sub-stanford01_T1w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-stanford01/anat/sub-stanford01_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-stanford01/anat/{sub-stanford01_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz => sub-stanford01_T2star_label-discs_desc-warp_dlabel.nii.gz} (100%) rename derivatives/labels/sub-stanford01/anat/{sub-stanford01_space-other_T2w_label-discs_dlabel.json => sub-stanford01_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-stanford01/anat/{sub-stanford01_space-other_T2w_label-discs_dlabel.nii.gz => sub-stanford01_T2w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-stanford01/anat/sub-stanford01_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-stanford01/anat/{sub-stanford01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-stanford01_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-stanford01/anat/sub-stanford01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-stanford01/anat/sub-stanford01_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-stanford01/anat/{sub-stanford01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-stanford01_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-stanford01/anat/sub-stanford01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json delete mode 100644 derivatives/labels/sub-stanford01/anat/sub-stanford01_space-other_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-stanford02/anat/{sub-stanford02_space-other_T1w_label-discs_dlabel.json => sub-stanford02_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-stanford02/anat/{sub-stanford02_space-other_T1w_label-discs_dlabel.nii.gz => sub-stanford02_T1w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-stanford02/anat/sub-stanford02_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-stanford02/anat/{sub-stanford02_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz => sub-stanford02_T2star_label-discs_desc-warp_dlabel.nii.gz} (100%) rename derivatives/labels/sub-stanford02/anat/{sub-stanford02_space-other_T2w_label-discs_dlabel.json => sub-stanford02_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-stanford02/anat/{sub-stanford02_space-other_T2w_label-discs_dlabel.nii.gz => sub-stanford02_T2w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-stanford02/anat/sub-stanford02_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-stanford02/anat/{sub-stanford02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-stanford02_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-stanford02/anat/sub-stanford02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-stanford02/anat/sub-stanford02_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-stanford02/anat/{sub-stanford02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-stanford02_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-stanford02/anat/sub-stanford02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json delete mode 100644 derivatives/labels/sub-stanford02/anat/sub-stanford02_space-other_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-stanford03/anat/{sub-stanford03_space-other_T1w_label-discs_dlabel.json => sub-stanford03_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-stanford03/anat/{sub-stanford03_space-other_T1w_label-discs_dlabel.nii.gz => sub-stanford03_T1w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-stanford03/anat/sub-stanford03_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-stanford03/anat/{sub-stanford03_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz => sub-stanford03_T2star_label-discs_desc-warp_dlabel.nii.gz} (100%) rename derivatives/labels/sub-stanford03/anat/{sub-stanford03_space-other_T2w_label-discs_dlabel.json => sub-stanford03_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-stanford03/anat/{sub-stanford03_space-other_T2w_label-discs_dlabel.nii.gz => sub-stanford03_T2w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-stanford03/anat/sub-stanford03_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-stanford03/anat/{sub-stanford03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-stanford03_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-stanford03/anat/sub-stanford03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-stanford03/anat/sub-stanford03_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-stanford03/anat/{sub-stanford03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-stanford03_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-stanford03/anat/sub-stanford03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-stanford03/anat/sub-stanford03_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.json rename derivatives/labels/sub-stanford03/anat/{sub-stanford03_space-other_T1w_RPI_r_labels-manual.nii.gz => sub-stanford03_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-stanford03/anat/sub-stanford03_space-other_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-stanford04/anat/{sub-stanford04_space-other_T1w_label-discs_dlabel.json => sub-stanford04_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-stanford04/anat/{sub-stanford04_space-other_T1w_label-discs_dlabel.nii.gz => sub-stanford04_T1w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-stanford04/anat/sub-stanford04_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-stanford04/anat/{sub-stanford04_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz => sub-stanford04_T2star_label-discs_desc-warp_dlabel.nii.gz} (100%) rename derivatives/labels/sub-stanford04/anat/{sub-stanford04_space-other_T2w_label-discs_dlabel.json => sub-stanford04_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-stanford04/anat/{sub-stanford04_space-other_T2w_label-discs_dlabel.nii.gz => sub-stanford04_T2w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-stanford04/anat/sub-stanford04_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-stanford04/anat/{sub-stanford04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-stanford04_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-stanford04/anat/sub-stanford04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-stanford04/anat/sub-stanford04_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-stanford04/anat/{sub-stanford04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-stanford04_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-stanford04/anat/sub-stanford04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json delete mode 100644 derivatives/labels/sub-stanford04/anat/sub-stanford04_space-other_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-stanford05/anat/{sub-stanford05_space-other_T1w_label-discs_dlabel.json => sub-stanford05_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-stanford05/anat/{sub-stanford05_space-other_T1w_label-discs_dlabel.nii.gz => sub-stanford05_T1w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-stanford05/anat/sub-stanford05_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-stanford05/anat/{sub-stanford05_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz => sub-stanford05_T2star_label-discs_desc-warp_dlabel.nii.gz} (100%) rename derivatives/labels/sub-stanford05/anat/{sub-stanford05_space-other_T2w_label-discs_dlabel.json => sub-stanford05_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-stanford05/anat/{sub-stanford05_space-other_T2w_label-discs_dlabel.nii.gz => sub-stanford05_T2w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-stanford05/anat/sub-stanford05_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-stanford05/anat/{sub-stanford05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-stanford05_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-stanford05/anat/sub-stanford05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-stanford05/anat/sub-stanford05_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-stanford05/anat/{sub-stanford05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-stanford05_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-stanford05/anat/sub-stanford05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json delete mode 100644 derivatives/labels/sub-stanford05/anat/sub-stanford05_space-other_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-stanford06/anat/{sub-stanford06_space-other_T1w_label-discs_dlabel.json => sub-stanford06_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-stanford06/anat/{sub-stanford06_space-other_T1w_label-discs_dlabel.nii.gz => sub-stanford06_T1w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-stanford06/anat/sub-stanford06_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-stanford06/anat/{sub-stanford06_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz => sub-stanford06_T2star_label-discs_desc-warp_dlabel.nii.gz} (100%) rename derivatives/labels/sub-stanford06/anat/{sub-stanford06_space-other_T2w_label-discs_dlabel.json => sub-stanford06_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-stanford06/anat/{sub-stanford06_space-other_T2w_label-discs_dlabel.nii.gz => sub-stanford06_T2w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-stanford06/anat/sub-stanford06_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-stanford06/anat/{sub-stanford06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-stanford06_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-stanford06/anat/sub-stanford06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-stanford06/anat/sub-stanford06_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-stanford06/anat/{sub-stanford06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-stanford06_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-stanford06/anat/sub-stanford06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-stanford06/anat/sub-stanford06_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.json rename derivatives/labels/sub-stanford06/anat/{sub-stanford06_space-other_T1w_RPI_r_labels-manual.nii.gz => sub-stanford06_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-stanford06/anat/sub-stanford06_space-other_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-strasbourg01/anat/{sub-strasbourg01_space-other_T1w_label-discs_dlabel.json => sub-strasbourg01_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-strasbourg01/anat/{sub-strasbourg01_space-other_T1w_label-discs_dlabel.nii.gz => sub-strasbourg01_T1w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-strasbourg01/anat/sub-strasbourg01_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-strasbourg01/anat/{sub-strasbourg01_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz => sub-strasbourg01_T2star_label-discs_desc-warp_dlabel.nii.gz} (100%) rename derivatives/labels/sub-strasbourg01/anat/{sub-strasbourg01_space-other_T2w_label-discs_dlabel.json => sub-strasbourg01_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-strasbourg01/anat/{sub-strasbourg01_space-other_T2w_label-discs_dlabel.nii.gz => sub-strasbourg01_T2w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-strasbourg01/anat/sub-strasbourg01_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-strasbourg01/anat/{sub-strasbourg01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-strasbourg01_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-strasbourg01/anat/sub-strasbourg01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-strasbourg01/anat/sub-strasbourg01_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-strasbourg01/anat/{sub-strasbourg01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-strasbourg01_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-strasbourg01/anat/sub-strasbourg01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json delete mode 100644 derivatives/labels/sub-strasbourg01/anat/sub-strasbourg01_space-other_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-strasbourg02/anat/{sub-strasbourg02_space-other_T1w_label-discs_dlabel.json => sub-strasbourg02_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-strasbourg02/anat/{sub-strasbourg02_space-other_T1w_label-discs_dlabel.nii.gz => sub-strasbourg02_T1w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-strasbourg02/anat/sub-strasbourg02_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-strasbourg02/anat/{sub-strasbourg02_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz => sub-strasbourg02_T2star_label-discs_desc-warp_dlabel.nii.gz} (100%) rename derivatives/labels/sub-strasbourg02/anat/{sub-strasbourg02_space-other_T2w_label-discs_dlabel.json => sub-strasbourg02_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-strasbourg02/anat/{sub-strasbourg02_space-other_T2w_label-discs_dlabel.nii.gz => sub-strasbourg02_T2w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-strasbourg02/anat/sub-strasbourg02_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-strasbourg02/anat/{sub-strasbourg02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-strasbourg02_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-strasbourg02/anat/sub-strasbourg02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-strasbourg02/anat/sub-strasbourg02_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-strasbourg02/anat/{sub-strasbourg02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-strasbourg02_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-strasbourg02/anat/sub-strasbourg02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json delete mode 100644 derivatives/labels/sub-strasbourg02/anat/sub-strasbourg02_space-other_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-strasbourg03/anat/{sub-strasbourg03_space-other_T1w_label-discs_dlabel.json => sub-strasbourg03_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-strasbourg03/anat/{sub-strasbourg03_space-other_T1w_label-discs_dlabel.nii.gz => sub-strasbourg03_T1w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-strasbourg03/anat/sub-strasbourg03_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-strasbourg03/anat/{sub-strasbourg03_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz => sub-strasbourg03_T2star_label-discs_desc-warp_dlabel.nii.gz} (100%) rename derivatives/labels/sub-strasbourg03/anat/{sub-strasbourg03_space-other_T2w_label-discs_dlabel.json => sub-strasbourg03_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-strasbourg03/anat/{sub-strasbourg03_space-other_T2w_label-discs_dlabel.nii.gz => sub-strasbourg03_T2w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-strasbourg03/anat/sub-strasbourg03_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-strasbourg03/anat/{sub-strasbourg03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-strasbourg03_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-strasbourg03/anat/sub-strasbourg03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-strasbourg03/anat/sub-strasbourg03_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-strasbourg03/anat/{sub-strasbourg03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-strasbourg03_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-strasbourg03/anat/sub-strasbourg03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json delete mode 100644 derivatives/labels/sub-strasbourg03/anat/sub-strasbourg03_space-other_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-strasbourg04/anat/{sub-strasbourg04_space-other_T1w_label-discs_dlabel.json => sub-strasbourg04_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-strasbourg04/anat/{sub-strasbourg04_space-other_T1w_label-discs_dlabel.nii.gz => sub-strasbourg04_T1w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-strasbourg04/anat/sub-strasbourg04_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-strasbourg04/anat/{sub-strasbourg04_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz => sub-strasbourg04_T2star_label-discs_desc-warp_dlabel.nii.gz} (100%) rename derivatives/labels/sub-strasbourg04/anat/{sub-strasbourg04_space-other_T2w_label-discs_dlabel.json => sub-strasbourg04_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-strasbourg04/anat/{sub-strasbourg04_space-other_T2w_label-discs_dlabel.nii.gz => sub-strasbourg04_T2w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-strasbourg04/anat/sub-strasbourg04_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-strasbourg04/anat/{sub-strasbourg04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-strasbourg04_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-strasbourg04/anat/sub-strasbourg04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-strasbourg04/anat/sub-strasbourg04_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-strasbourg04/anat/{sub-strasbourg04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-strasbourg04_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-strasbourg04/anat/sub-strasbourg04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json delete mode 100644 derivatives/labels/sub-strasbourg04/anat/sub-strasbourg04_space-other_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-strasbourg05/anat/{sub-strasbourg05_space-other_T1w_label-discs_dlabel.json => sub-strasbourg05_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-strasbourg05/anat/{sub-strasbourg05_space-other_T1w_label-discs_dlabel.nii.gz => sub-strasbourg05_T1w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-strasbourg05/anat/sub-strasbourg05_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-strasbourg05/anat/{sub-strasbourg05_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz => sub-strasbourg05_T2star_label-discs_desc-warp_dlabel.nii.gz} (100%) rename derivatives/labels/sub-strasbourg05/anat/{sub-strasbourg05_space-other_T2w_label-discs_dlabel.json => sub-strasbourg05_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-strasbourg05/anat/{sub-strasbourg05_space-other_T2w_label-discs_dlabel.nii.gz => sub-strasbourg05_T2w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-strasbourg05/anat/sub-strasbourg05_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-strasbourg05/anat/{sub-strasbourg05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-strasbourg05_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-strasbourg05/anat/sub-strasbourg05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-strasbourg05/anat/sub-strasbourg05_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-strasbourg05/anat/{sub-strasbourg05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-strasbourg05_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 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sub-strasbourg06_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-strasbourg06/anat/{sub-strasbourg06_space-other_T2w_label-discs_dlabel.nii.gz => sub-strasbourg06_T2w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-strasbourg06/anat/sub-strasbourg06_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-strasbourg06/anat/{sub-strasbourg06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-strasbourg06_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-strasbourg06/anat/sub-strasbourg06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-strasbourg06/anat/sub-strasbourg06_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-strasbourg06/anat/{sub-strasbourg06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-strasbourg06_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-strasbourg06/anat/sub-strasbourg06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json delete mode 100644 derivatives/labels/sub-strasbourg06/anat/sub-strasbourg06_space-other_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-tehranS01/anat/{sub-tehranS01_space-other_T1w_label-discs_dlabel.json => sub-tehranS01_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-tehranS01/anat/{sub-tehranS01_space-other_T1w_label-discs_dlabel.nii.gz => sub-tehranS01_T1w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-tehranS01/anat/sub-tehranS01_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-tehranS01/anat/{sub-tehranS01_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz => sub-tehranS01_T2star_label-discs_desc-warp_dlabel.nii.gz} (100%) rename derivatives/labels/sub-tehranS01/anat/{sub-tehranS01_space-other_T2w_label-discs_dlabel.json => sub-tehranS01_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-tehranS01/anat/{sub-tehranS01_space-other_T2w_label-discs_dlabel.nii.gz => sub-tehranS01_T2w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-tehranS01/anat/sub-tehranS01_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-tehranS01/anat/{sub-tehranS01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-tehranS01_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-tehranS01/anat/sub-tehranS01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-tehranS01/anat/sub-tehranS01_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-tehranS01/anat/{sub-tehranS01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-tehranS01_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-tehranS01/anat/sub-tehranS01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json delete mode 100644 derivatives/labels/sub-tehranS01/anat/sub-tehranS01_space-other_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-tehranS02/anat/{sub-tehranS02_space-other_T1w_label-discs_dlabel.json => sub-tehranS02_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-tehranS02/anat/{sub-tehranS02_space-other_T1w_label-discs_dlabel.nii.gz => sub-tehranS02_T1w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-tehranS02/anat/sub-tehranS02_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-tehranS02/anat/{sub-tehranS02_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz => sub-tehranS02_T2star_label-discs_desc-warp_dlabel.nii.gz} (100%) rename derivatives/labels/sub-tehranS02/anat/{sub-tehranS02_space-other_T2w_label-discs_dlabel.json => sub-tehranS02_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-tehranS02/anat/{sub-tehranS02_space-other_T2w_label-discs_dlabel.nii.gz => sub-tehranS02_T2w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-tehranS02/anat/sub-tehranS02_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-tehranS02/anat/{sub-tehranS02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-tehranS02_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-tehranS02/anat/sub-tehranS02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-tehranS02/anat/sub-tehranS02_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-tehranS02/anat/{sub-tehranS02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-tehranS02_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-tehranS02/anat/sub-tehranS02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-tehranS02/anat/sub-tehranS02_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.json rename derivatives/labels/sub-tehranS02/anat/{sub-tehranS02_space-other_T1w_RPI_r_labels-manual.nii.gz => sub-tehranS02_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-tehranS02/anat/sub-tehranS02_space-other_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-tehranS03/anat/{sub-tehranS03_space-other_T1w_label-discs_dlabel.json => sub-tehranS03_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-tehranS03/anat/{sub-tehranS03_space-other_T1w_label-discs_dlabel.nii.gz => sub-tehranS03_T1w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-tehranS03/anat/sub-tehranS03_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-tehranS03/anat/{sub-tehranS03_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz => sub-tehranS03_T2star_label-discs_desc-warp_dlabel.nii.gz} (100%) rename derivatives/labels/sub-tehranS03/anat/{sub-tehranS03_space-other_T2w_label-discs_dlabel.json => sub-tehranS03_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-tehranS03/anat/{sub-tehranS03_space-other_T2w_label-discs_dlabel.nii.gz => sub-tehranS03_T2w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-tehranS03/anat/sub-tehranS03_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-tehranS03/anat/{sub-tehranS03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-tehranS03_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-tehranS03/anat/sub-tehranS03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-tehranS03/anat/sub-tehranS03_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-tehranS03/anat/{sub-tehranS03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-tehranS03_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-tehranS03/anat/sub-tehranS03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-tehranS03/anat/sub-tehranS03_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.json rename derivatives/labels/sub-tehranS03/anat/{sub-tehranS03_space-other_T1w_RPI_r_labels-manual.nii.gz => sub-tehranS03_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-tehranS03/anat/sub-tehranS03_space-other_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-tehranS04/anat/{sub-tehranS04_space-other_T1w_label-discs_dlabel.json => sub-tehranS04_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-tehranS04/anat/{sub-tehranS04_space-other_T1w_label-discs_dlabel.nii.gz => sub-tehranS04_T1w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-tehranS04/anat/sub-tehranS04_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-tehranS04/anat/{sub-tehranS04_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz => sub-tehranS04_T2star_label-discs_desc-warp_dlabel.nii.gz} (100%) rename derivatives/labels/sub-tehranS04/anat/{sub-tehranS04_space-other_T2w_label-discs_dlabel.json => sub-tehranS04_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-tehranS04/anat/{sub-tehranS04_space-other_T2w_label-discs_dlabel.nii.gz => sub-tehranS04_T2w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-tehranS04/anat/sub-tehranS04_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-tehranS04/anat/{sub-tehranS04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-tehranS04_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-tehranS04/anat/sub-tehranS04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-tehranS04/anat/sub-tehranS04_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-tehranS04/anat/{sub-tehranS04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-tehranS04_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-tehranS04/anat/sub-tehranS04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json delete mode 100644 derivatives/labels/sub-tehranS04/anat/sub-tehranS04_space-other_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-tehranS05/anat/{sub-tehranS05_space-other_T1w_label-discs_dlabel.json => sub-tehranS05_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-tehranS05/anat/{sub-tehranS05_space-other_T1w_label-discs_dlabel.nii.gz => sub-tehranS05_T1w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-tehranS05/anat/sub-tehranS05_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-tehranS05/anat/{sub-tehranS05_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz => sub-tehranS05_T2star_label-discs_desc-warp_dlabel.nii.gz} (100%) rename derivatives/labels/sub-tehranS05/anat/{sub-tehranS05_space-other_T2w_label-discs_dlabel.json => sub-tehranS05_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-tehranS05/anat/{sub-tehranS05_space-other_T2w_label-discs_dlabel.nii.gz => sub-tehranS05_T2w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-tehranS05/anat/sub-tehranS05_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-tehranS05/anat/{sub-tehranS05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-tehranS05_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-tehranS05/anat/sub-tehranS05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-tehranS05/anat/sub-tehranS05_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-tehranS05/anat/{sub-tehranS05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-tehranS05_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-tehranS05/anat/sub-tehranS05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json delete mode 100644 derivatives/labels/sub-tehranS05/anat/sub-tehranS05_space-other_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-tehranS06/anat/{sub-tehranS06_space-other_T1w_label-discs_dlabel.json => sub-tehranS06_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-tehranS06/anat/{sub-tehranS06_space-other_T1w_label-discs_dlabel.nii.gz => sub-tehranS06_T1w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-tehranS06/anat/sub-tehranS06_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-tehranS06/anat/{sub-tehranS06_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz => sub-tehranS06_T2star_label-discs_desc-warp_dlabel.nii.gz} (100%) rename derivatives/labels/sub-tehranS06/anat/{sub-tehranS06_space-other_T2w_label-discs_dlabel.json => sub-tehranS06_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-tehranS06/anat/{sub-tehranS06_space-other_T2w_label-discs_dlabel.nii.gz => sub-tehranS06_T2w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-tehranS06/anat/sub-tehranS06_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-tehranS06/anat/{sub-tehranS06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-tehranS06_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-tehranS06/anat/sub-tehranS06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-tehranS06/anat/sub-tehranS06_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-tehranS06/anat/{sub-tehranS06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-tehranS06_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-tehranS06/anat/sub-tehranS06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json delete mode 100644 derivatives/labels/sub-tehranS06/anat/sub-tehranS06_space-other_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-tokyo750w01/anat/{sub-tokyo750w01_space-other_T1w_label-discs_dlabel.json => sub-tokyo750w01_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-tokyo750w01/anat/{sub-tokyo750w01_space-other_T1w_label-discs_dlabel.nii.gz => sub-tokyo750w01_T1w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-tokyo750w01/anat/sub-tokyo750w01_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-tokyo750w01/anat/{sub-tokyo750w01_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz => sub-tokyo750w01_T2star_label-discs_desc-warp_dlabel.nii.gz} (100%) rename derivatives/labels/sub-tokyo750w01/anat/{sub-tokyo750w01_space-other_T2w_label-discs_dlabel.json => sub-tokyo750w01_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-tokyo750w01/anat/{sub-tokyo750w01_space-other_T2w_label-discs_dlabel.nii.gz => sub-tokyo750w01_T2w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-tokyo750w01/anat/sub-tokyo750w01_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-tokyo750w01/anat/{sub-tokyo750w01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-tokyo750w01_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-tokyo750w01/anat/sub-tokyo750w01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-tokyo750w01/anat/sub-tokyo750w01_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-tokyo750w01/anat/{sub-tokyo750w01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-tokyo750w01_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-tokyo750w01/anat/sub-tokyo750w01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json delete mode 100644 derivatives/labels/sub-tokyo750w01/anat/sub-tokyo750w01_space-other_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-tokyo750w02/anat/{sub-tokyo750w02_space-other_T1w_label-discs_dlabel.json => sub-tokyo750w02_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-tokyo750w02/anat/{sub-tokyo750w02_space-other_T1w_label-discs_dlabel.nii.gz => sub-tokyo750w02_T1w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-tokyo750w02/anat/sub-tokyo750w02_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-tokyo750w02/anat/{sub-tokyo750w02_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz => sub-tokyo750w02_T2star_label-discs_desc-warp_dlabel.nii.gz} (100%) rename derivatives/labels/sub-tokyo750w02/anat/{sub-tokyo750w02_space-other_T2w_label-discs_dlabel.json => sub-tokyo750w02_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-tokyo750w02/anat/{sub-tokyo750w02_space-other_T2w_label-discs_dlabel.nii.gz => sub-tokyo750w02_T2w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-tokyo750w02/anat/sub-tokyo750w02_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-tokyo750w02/anat/{sub-tokyo750w02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-tokyo750w02_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-tokyo750w02/anat/sub-tokyo750w02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-tokyo750w02/anat/sub-tokyo750w02_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-tokyo750w02/anat/{sub-tokyo750w02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-tokyo750w02_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-tokyo750w02/anat/sub-tokyo750w02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json delete mode 100644 derivatives/labels/sub-tokyo750w02/anat/sub-tokyo750w02_space-other_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-tokyo750w03/anat/{sub-tokyo750w03_space-other_T1w_label-discs_dlabel.json => sub-tokyo750w03_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-tokyo750w03/anat/{sub-tokyo750w03_space-other_T1w_label-discs_dlabel.nii.gz => sub-tokyo750w03_T1w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-tokyo750w03/anat/sub-tokyo750w03_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-tokyo750w03/anat/{sub-tokyo750w03_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz => sub-tokyo750w03_T2star_label-discs_desc-warp_dlabel.nii.gz} (100%) rename derivatives/labels/sub-tokyo750w03/anat/{sub-tokyo750w03_space-other_T2w_label-discs_dlabel.json => sub-tokyo750w03_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-tokyo750w03/anat/{sub-tokyo750w03_space-other_T2w_label-discs_dlabel.nii.gz => sub-tokyo750w03_T2w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-tokyo750w03/anat/sub-tokyo750w03_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-tokyo750w03/anat/{sub-tokyo750w03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-tokyo750w03_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-tokyo750w03/anat/sub-tokyo750w03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-tokyo750w03/anat/sub-tokyo750w03_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-tokyo750w03/anat/{sub-tokyo750w03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-tokyo750w03_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-tokyo750w03/anat/sub-tokyo750w03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json delete mode 100644 derivatives/labels/sub-tokyo750w03/anat/sub-tokyo750w03_space-other_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-tokyo750w04/anat/{sub-tokyo750w04_space-other_T1w_label-discs_dlabel.json => sub-tokyo750w04_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-tokyo750w04/anat/{sub-tokyo750w04_space-other_T1w_label-discs_dlabel.nii.gz => sub-tokyo750w04_T1w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-tokyo750w04/anat/sub-tokyo750w04_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-tokyo750w04/anat/{sub-tokyo750w04_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz => sub-tokyo750w04_T2star_label-discs_desc-warp_dlabel.nii.gz} (100%) rename derivatives/labels/sub-tokyo750w04/anat/{sub-tokyo750w04_space-other_T2w_label-discs_dlabel.json => sub-tokyo750w04_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-tokyo750w04/anat/{sub-tokyo750w04_space-other_T2w_label-discs_dlabel.nii.gz => sub-tokyo750w04_T2w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-tokyo750w04/anat/sub-tokyo750w04_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-tokyo750w04/anat/{sub-tokyo750w04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-tokyo750w04_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-tokyo750w04/anat/sub-tokyo750w04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-tokyo750w04/anat/sub-tokyo750w04_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-tokyo750w04/anat/{sub-tokyo750w04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-tokyo750w04_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-tokyo750w04/anat/sub-tokyo750w04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json delete mode 100644 derivatives/labels/sub-tokyo750w04/anat/sub-tokyo750w04_space-other_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-tokyo750w05/anat/{sub-tokyo750w05_space-other_T1w_label-discs_dlabel.json => sub-tokyo750w05_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-tokyo750w05/anat/{sub-tokyo750w05_space-other_T1w_label-discs_dlabel.nii.gz => sub-tokyo750w05_T1w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-tokyo750w05/anat/sub-tokyo750w05_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-tokyo750w05/anat/{sub-tokyo750w05_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz => sub-tokyo750w05_T2star_label-discs_desc-warp_dlabel.nii.gz} (100%) rename derivatives/labels/sub-tokyo750w05/anat/{sub-tokyo750w05_space-other_T2w_label-discs_dlabel.json => sub-tokyo750w05_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-tokyo750w05/anat/{sub-tokyo750w05_space-other_T2w_label-discs_dlabel.nii.gz => sub-tokyo750w05_T2w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-tokyo750w05/anat/sub-tokyo750w05_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-tokyo750w05/anat/{sub-tokyo750w05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-tokyo750w05_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-tokyo750w05/anat/sub-tokyo750w05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-tokyo750w05/anat/sub-tokyo750w05_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-tokyo750w05/anat/{sub-tokyo750w05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-tokyo750w05_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-tokyo750w05/anat/sub-tokyo750w05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json delete mode 100644 derivatives/labels/sub-tokyo750w05/anat/sub-tokyo750w05_space-other_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-tokyo750w06/anat/{sub-tokyo750w06_space-other_T1w_label-discs_dlabel.json => sub-tokyo750w06_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-tokyo750w06/anat/{sub-tokyo750w06_space-other_T1w_label-discs_dlabel.nii.gz => sub-tokyo750w06_T1w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-tokyo750w06/anat/sub-tokyo750w06_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-tokyo750w06/anat/{sub-tokyo750w06_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz => sub-tokyo750w06_T2star_label-discs_desc-warp_dlabel.nii.gz} (100%) rename derivatives/labels/sub-tokyo750w06/anat/{sub-tokyo750w06_space-other_T2w_label-discs_dlabel.json => sub-tokyo750w06_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-tokyo750w06/anat/{sub-tokyo750w06_space-other_T2w_label-discs_dlabel.nii.gz => sub-tokyo750w06_T2w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-tokyo750w06/anat/sub-tokyo750w06_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-tokyo750w06/anat/{sub-tokyo750w06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-tokyo750w06_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-tokyo750w06/anat/sub-tokyo750w06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-tokyo750w06/anat/sub-tokyo750w06_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-tokyo750w06/anat/{sub-tokyo750w06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-tokyo750w06_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-tokyo750w06/anat/sub-tokyo750w06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json delete mode 100644 derivatives/labels/sub-tokyo750w06/anat/sub-tokyo750w06_space-other_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-tokyo750w07/anat/{sub-tokyo750w07_space-other_T1w_label-discs_dlabel.json => sub-tokyo750w07_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-tokyo750w07/anat/{sub-tokyo750w07_space-other_T1w_label-discs_dlabel.nii.gz => sub-tokyo750w07_T1w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-tokyo750w07/anat/sub-tokyo750w07_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-tokyo750w07/anat/{sub-tokyo750w07_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz => sub-tokyo750w07_T2star_label-discs_desc-warp_dlabel.nii.gz} (100%) rename derivatives/labels/sub-tokyo750w07/anat/{sub-tokyo750w07_space-other_T2w_label-discs_dlabel.json => sub-tokyo750w07_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-tokyo750w07/anat/{sub-tokyo750w07_space-other_T2w_label-discs_dlabel.nii.gz => sub-tokyo750w07_T2w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-tokyo750w07/anat/sub-tokyo750w07_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-tokyo750w07/anat/{sub-tokyo750w07_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-tokyo750w07_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-tokyo750w07/anat/sub-tokyo750w07_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-tokyo750w07/anat/sub-tokyo750w07_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-tokyo750w07/anat/{sub-tokyo750w07_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-tokyo750w07_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-tokyo750w07/anat/sub-tokyo750w07_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json delete mode 100644 derivatives/labels/sub-tokyo750w07/anat/sub-tokyo750w07_space-other_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-tokyoIngenia01/anat/{sub-tokyoIngenia01_space-other_T1w_label-discs_dlabel.json => sub-tokyoIngenia01_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-tokyoIngenia01/anat/{sub-tokyoIngenia01_space-other_T1w_label-discs_dlabel.nii.gz => sub-tokyoIngenia01_T1w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-tokyoIngenia01/anat/sub-tokyoIngenia01_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-tokyoIngenia01/anat/{sub-tokyoIngenia01_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz => sub-tokyoIngenia01_T2star_label-discs_desc-warp_dlabel.nii.gz} (100%) rename derivatives/labels/sub-tokyoIngenia01/anat/{sub-tokyoIngenia01_space-other_T2w_label-discs_dlabel.json => sub-tokyoIngenia01_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-tokyoIngenia01/anat/{sub-tokyoIngenia01_space-other_T2w_label-discs_dlabel.nii.gz => sub-tokyoIngenia01_T2w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-tokyoIngenia01/anat/sub-tokyoIngenia01_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-tokyoIngenia01/anat/{sub-tokyoIngenia01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-tokyoIngenia01_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-tokyoIngenia01/anat/sub-tokyoIngenia01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-tokyoIngenia01/anat/sub-tokyoIngenia01_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-tokyoIngenia01/anat/{sub-tokyoIngenia01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-tokyoIngenia01_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-tokyoIngenia01/anat/sub-tokyoIngenia01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json delete mode 100644 derivatives/labels/sub-tokyoIngenia01/anat/sub-tokyoIngenia01_space-other_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-tokyoIngenia02/anat/{sub-tokyoIngenia02_space-other_T1w_label-discs_dlabel.json => sub-tokyoIngenia02_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-tokyoIngenia02/anat/{sub-tokyoIngenia02_space-other_T1w_label-discs_dlabel.nii.gz => sub-tokyoIngenia02_T1w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-tokyoIngenia02/anat/sub-tokyoIngenia02_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-tokyoIngenia02/anat/{sub-tokyoIngenia02_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz => sub-tokyoIngenia02_T2star_label-discs_desc-warp_dlabel.nii.gz} (100%) rename derivatives/labels/sub-tokyoIngenia02/anat/{sub-tokyoIngenia02_space-other_T2w_label-discs_dlabel.json => sub-tokyoIngenia02_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-tokyoIngenia02/anat/{sub-tokyoIngenia02_space-other_T2w_label-discs_dlabel.nii.gz => sub-tokyoIngenia02_T2w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-tokyoIngenia02/anat/sub-tokyoIngenia02_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-tokyoIngenia02/anat/{sub-tokyoIngenia02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-tokyoIngenia02_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-tokyoIngenia02/anat/sub-tokyoIngenia02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-tokyoIngenia02/anat/sub-tokyoIngenia02_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-tokyoIngenia02/anat/{sub-tokyoIngenia02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-tokyoIngenia02_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-tokyoIngenia02/anat/sub-tokyoIngenia02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json delete mode 100644 derivatives/labels/sub-tokyoIngenia02/anat/sub-tokyoIngenia02_space-other_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-tokyoIngenia03/anat/{sub-tokyoIngenia03_space-other_T1w_label-discs_dlabel.json => sub-tokyoIngenia03_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-tokyoIngenia03/anat/{sub-tokyoIngenia03_space-other_T1w_label-discs_dlabel.nii.gz => sub-tokyoIngenia03_T1w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-tokyoIngenia03/anat/sub-tokyoIngenia03_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-tokyoIngenia03/anat/{sub-tokyoIngenia03_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz => sub-tokyoIngenia03_T2star_label-discs_desc-warp_dlabel.nii.gz} (100%) rename derivatives/labels/sub-tokyoIngenia03/anat/{sub-tokyoIngenia03_space-other_T2w_label-discs_dlabel.json => sub-tokyoIngenia03_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-tokyoIngenia03/anat/{sub-tokyoIngenia03_space-other_T2w_label-discs_dlabel.nii.gz => sub-tokyoIngenia03_T2w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-tokyoIngenia03/anat/sub-tokyoIngenia03_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-tokyoIngenia03/anat/{sub-tokyoIngenia03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-tokyoIngenia03_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-tokyoIngenia03/anat/sub-tokyoIngenia03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-tokyoIngenia03/anat/sub-tokyoIngenia03_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-tokyoIngenia03/anat/{sub-tokyoIngenia03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-tokyoIngenia03_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-tokyoIngenia03/anat/sub-tokyoIngenia03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-tokyoIngenia03/anat/sub-tokyoIngenia03_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.json rename derivatives/labels/sub-tokyoIngenia03/anat/{sub-tokyoIngenia03_space-other_T1w_RPI_r_labels-manual.nii.gz => sub-tokyoIngenia03_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-tokyoIngenia03/anat/sub-tokyoIngenia03_space-other_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-tokyoIngenia04/anat/{sub-tokyoIngenia04_space-other_T1w_label-discs_dlabel.json => sub-tokyoIngenia04_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-tokyoIngenia04/anat/{sub-tokyoIngenia04_space-other_T1w_label-discs_dlabel.nii.gz => sub-tokyoIngenia04_T1w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-tokyoIngenia04/anat/sub-tokyoIngenia04_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-tokyoIngenia04/anat/{sub-tokyoIngenia04_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz => sub-tokyoIngenia04_T2star_label-discs_desc-warp_dlabel.nii.gz} (100%) rename derivatives/labels/sub-tokyoIngenia04/anat/{sub-tokyoIngenia04_space-other_T2w_label-discs_dlabel.json => sub-tokyoIngenia04_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-tokyoIngenia04/anat/{sub-tokyoIngenia04_space-other_T2w_label-discs_dlabel.nii.gz => sub-tokyoIngenia04_T2w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-tokyoIngenia04/anat/sub-tokyoIngenia04_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-tokyoIngenia04/anat/{sub-tokyoIngenia04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-tokyoIngenia04_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-tokyoIngenia04/anat/sub-tokyoIngenia04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-tokyoIngenia04/anat/sub-tokyoIngenia04_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-tokyoIngenia04/anat/{sub-tokyoIngenia04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-tokyoIngenia04_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-tokyoIngenia04/anat/sub-tokyoIngenia04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json delete mode 100644 derivatives/labels/sub-tokyoIngenia04/anat/sub-tokyoIngenia04_space-other_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-tokyoIngenia05/anat/{sub-tokyoIngenia05_space-other_T1w_label-discs_dlabel.json => sub-tokyoIngenia05_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-tokyoIngenia05/anat/{sub-tokyoIngenia05_space-other_T1w_label-discs_dlabel.nii.gz => sub-tokyoIngenia05_T1w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-tokyoIngenia05/anat/sub-tokyoIngenia05_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-tokyoIngenia05/anat/{sub-tokyoIngenia05_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz => sub-tokyoIngenia05_T2star_label-discs_desc-warp_dlabel.nii.gz} (100%) rename derivatives/labels/sub-tokyoIngenia05/anat/{sub-tokyoIngenia05_space-other_T2w_label-discs_dlabel.json => sub-tokyoIngenia05_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-tokyoIngenia05/anat/{sub-tokyoIngenia05_space-other_T2w_label-discs_dlabel.nii.gz => sub-tokyoIngenia05_T2w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-tokyoIngenia05/anat/sub-tokyoIngenia05_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-tokyoIngenia05/anat/{sub-tokyoIngenia05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-tokyoIngenia05_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-tokyoIngenia05/anat/sub-tokyoIngenia05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-tokyoIngenia05/anat/sub-tokyoIngenia05_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-tokyoIngenia05/anat/{sub-tokyoIngenia05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-tokyoIngenia05_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-tokyoIngenia05/anat/sub-tokyoIngenia05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json delete mode 100644 derivatives/labels/sub-tokyoIngenia05/anat/sub-tokyoIngenia05_space-other_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-tokyoIngenia05/anat/{sub-tokyoIngenia05_space-other_T2w_csflabel-SC_seg.json => sub-tokyoIngenia05_space-other_T2w_label-CSF_seg.json} (100%) rename derivatives/labels/sub-tokyoIngenia05/anat/{sub-tokyoIngenia05_space-other_T2w_csflabel-SC_seg.nii.gz => sub-tokyoIngenia05_space-other_T2w_label-CSF_seg.nii.gz} (100%) create mode 100644 derivatives/labels/sub-tokyoIngenia05/anat/sub-tokyoIngenia05_space-other_T2w_label-canal_seg.json create mode 100644 derivatives/labels/sub-tokyoIngenia05/anat/sub-tokyoIngenia05_space-other_T2w_label-canal_seg.nii.gz rename derivatives/labels/sub-tokyoIngenia06/anat/{sub-tokyoIngenia06_space-other_T1w_label-discs_dlabel.json => sub-tokyoIngenia06_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-tokyoIngenia06/anat/{sub-tokyoIngenia06_space-other_T1w_label-discs_dlabel.nii.gz => sub-tokyoIngenia06_T1w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-tokyoIngenia06/anat/sub-tokyoIngenia06_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-tokyoIngenia06/anat/{sub-tokyoIngenia06_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz => sub-tokyoIngenia06_T2star_label-discs_desc-warp_dlabel.nii.gz} (100%) rename derivatives/labels/sub-tokyoIngenia06/anat/{sub-tokyoIngenia06_space-other_T2w_label-discs_dlabel.json => sub-tokyoIngenia06_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-tokyoIngenia06/anat/{sub-tokyoIngenia06_space-other_T2w_label-discs_dlabel.nii.gz => sub-tokyoIngenia06_T2w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-tokyoIngenia06/anat/sub-tokyoIngenia06_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-tokyoIngenia06/anat/{sub-tokyoIngenia06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-tokyoIngenia06_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-tokyoIngenia06/anat/sub-tokyoIngenia06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-tokyoIngenia06/anat/sub-tokyoIngenia06_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-tokyoIngenia06/anat/{sub-tokyoIngenia06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-tokyoIngenia06_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-tokyoIngenia06/anat/sub-tokyoIngenia06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json delete mode 100644 derivatives/labels/sub-tokyoIngenia06/anat/sub-tokyoIngenia06_space-other_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-tokyoIngenia06/anat/{sub-tokyoIngenia06_space-other_T2w_csflabel-SC_seg.json => sub-tokyoIngenia06_space-other_T2w_label-CSF_seg.json} (100%) rename derivatives/labels/sub-tokyoIngenia06/anat/{sub-tokyoIngenia06_space-other_T2w_csflabel-SC_seg.nii.gz => sub-tokyoIngenia06_space-other_T2w_label-CSF_seg.nii.gz} (100%) create mode 100644 derivatives/labels/sub-tokyoIngenia06/anat/sub-tokyoIngenia06_space-other_T2w_label-canal_seg.json create mode 100644 derivatives/labels/sub-tokyoIngenia06/anat/sub-tokyoIngenia06_space-other_T2w_label-canal_seg.nii.gz rename derivatives/labels/sub-tokyoIngenia07/anat/{sub-tokyoIngenia07_space-other_T1w_label-discs_dlabel.json => sub-tokyoIngenia07_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-tokyoIngenia07/anat/{sub-tokyoIngenia07_space-other_T1w_label-discs_dlabel.nii.gz => sub-tokyoIngenia07_T1w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-tokyoIngenia07/anat/sub-tokyoIngenia07_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-tokyoIngenia07/anat/{sub-tokyoIngenia07_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz => sub-tokyoIngenia07_T2star_label-discs_desc-warp_dlabel.nii.gz} (100%) rename derivatives/labels/sub-tokyoIngenia07/anat/{sub-tokyoIngenia07_space-other_T2w_label-discs_dlabel.json => sub-tokyoIngenia07_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-tokyoIngenia07/anat/{sub-tokyoIngenia07_space-other_T2w_label-discs_dlabel.nii.gz => sub-tokyoIngenia07_T2w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-tokyoIngenia07/anat/sub-tokyoIngenia07_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-tokyoIngenia07/anat/{sub-tokyoIngenia07_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-tokyoIngenia07_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-tokyoIngenia07/anat/sub-tokyoIngenia07_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-tokyoIngenia07/anat/sub-tokyoIngenia07_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-tokyoIngenia07/anat/{sub-tokyoIngenia07_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-tokyoIngenia07_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-tokyoIngenia07/anat/sub-tokyoIngenia07_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json delete mode 100644 derivatives/labels/sub-tokyoIngenia07/anat/sub-tokyoIngenia07_space-other_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-tokyoSkyra01/anat/{sub-tokyoSkyra01_space-other_T1w_label-discs_dlabel.json => sub-tokyoSkyra01_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-tokyoSkyra01/anat/{sub-tokyoSkyra01_space-other_T1w_label-discs_dlabel.nii.gz => sub-tokyoSkyra01_T1w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-tokyoSkyra01/anat/sub-tokyoSkyra01_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-tokyoSkyra01/anat/{sub-tokyoSkyra01_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz => sub-tokyoSkyra01_T2star_label-discs_desc-warp_dlabel.nii.gz} (100%) rename derivatives/labels/sub-tokyoSkyra01/anat/{sub-tokyoSkyra01_space-other_T2w_label-discs_dlabel.json => sub-tokyoSkyra01_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-tokyoSkyra01/anat/{sub-tokyoSkyra01_space-other_T2w_label-discs_dlabel.nii.gz => sub-tokyoSkyra01_T2w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-tokyoSkyra01/anat/sub-tokyoSkyra01_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-tokyoSkyra01/anat/{sub-tokyoSkyra01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-tokyoSkyra01_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-tokyoSkyra01/anat/sub-tokyoSkyra01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-tokyoSkyra01/anat/sub-tokyoSkyra01_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-tokyoSkyra01/anat/{sub-tokyoSkyra01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-tokyoSkyra01_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-tokyoSkyra01/anat/sub-tokyoSkyra01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json delete mode 100644 derivatives/labels/sub-tokyoSkyra01/anat/sub-tokyoSkyra01_space-other_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-tokyoSkyra02/anat/{sub-tokyoSkyra02_space-other_T1w_label-discs_dlabel.json => sub-tokyoSkyra02_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-tokyoSkyra02/anat/{sub-tokyoSkyra02_space-other_T1w_label-discs_dlabel.nii.gz => sub-tokyoSkyra02_T1w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-tokyoSkyra02/anat/sub-tokyoSkyra02_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-tokyoSkyra02/anat/{sub-tokyoSkyra02_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz => sub-tokyoSkyra02_T2star_label-discs_desc-warp_dlabel.nii.gz} (100%) rename derivatives/labels/sub-tokyoSkyra02/anat/{sub-tokyoSkyra02_space-other_T2w_label-discs_dlabel.json => sub-tokyoSkyra02_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-tokyoSkyra02/anat/{sub-tokyoSkyra02_space-other_T2w_label-discs_dlabel.nii.gz => sub-tokyoSkyra02_T2w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-tokyoSkyra02/anat/sub-tokyoSkyra02_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-tokyoSkyra02/anat/{sub-tokyoSkyra02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-tokyoSkyra02_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-tokyoSkyra02/anat/sub-tokyoSkyra02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-tokyoSkyra02/anat/sub-tokyoSkyra02_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-tokyoSkyra02/anat/{sub-tokyoSkyra02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-tokyoSkyra02_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-tokyoSkyra02/anat/sub-tokyoSkyra02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json delete mode 100644 derivatives/labels/sub-tokyoSkyra02/anat/sub-tokyoSkyra02_space-other_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-tokyoSkyra03/anat/{sub-tokyoSkyra03_space-other_T1w_label-discs_dlabel.json => sub-tokyoSkyra03_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-tokyoSkyra03/anat/{sub-tokyoSkyra03_space-other_T1w_label-discs_dlabel.nii.gz => sub-tokyoSkyra03_T1w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-tokyoSkyra03/anat/sub-tokyoSkyra03_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-tokyoSkyra03/anat/{sub-tokyoSkyra03_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz => sub-tokyoSkyra03_T2star_label-discs_desc-warp_dlabel.nii.gz} (100%) rename derivatives/labels/sub-tokyoSkyra03/anat/{sub-tokyoSkyra03_space-other_T2w_label-discs_dlabel.json => sub-tokyoSkyra03_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-tokyoSkyra03/anat/{sub-tokyoSkyra03_space-other_T2w_label-discs_dlabel.nii.gz => sub-tokyoSkyra03_T2w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-tokyoSkyra03/anat/sub-tokyoSkyra03_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-tokyoSkyra03/anat/{sub-tokyoSkyra03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-tokyoSkyra03_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-tokyoSkyra03/anat/sub-tokyoSkyra03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-tokyoSkyra03/anat/sub-tokyoSkyra03_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-tokyoSkyra03/anat/{sub-tokyoSkyra03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-tokyoSkyra03_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-tokyoSkyra03/anat/sub-tokyoSkyra03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-tokyoSkyra03/anat/sub-tokyoSkyra03_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.json rename derivatives/labels/sub-tokyoSkyra03/anat/{sub-tokyoSkyra03_space-other_T1w_RPI_r_labels-manual.nii.gz => sub-tokyoSkyra03_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-tokyoSkyra03/anat/sub-tokyoSkyra03_space-other_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-tokyoSkyra04/anat/{sub-tokyoSkyra04_space-other_T1w_label-discs_dlabel.json => sub-tokyoSkyra04_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-tokyoSkyra04/anat/{sub-tokyoSkyra04_space-other_T1w_label-discs_dlabel.nii.gz => sub-tokyoSkyra04_T1w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-tokyoSkyra04/anat/sub-tokyoSkyra04_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-tokyoSkyra04/anat/{sub-tokyoSkyra04_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz => sub-tokyoSkyra04_T2star_label-discs_desc-warp_dlabel.nii.gz} (100%) rename derivatives/labels/sub-tokyoSkyra04/anat/{sub-tokyoSkyra04_space-other_T2w_label-discs_dlabel.json => sub-tokyoSkyra04_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-tokyoSkyra04/anat/{sub-tokyoSkyra04_space-other_T2w_label-discs_dlabel.nii.gz => sub-tokyoSkyra04_T2w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-tokyoSkyra04/anat/sub-tokyoSkyra04_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-tokyoSkyra04/anat/{sub-tokyoSkyra04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-tokyoSkyra04_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-tokyoSkyra04/anat/sub-tokyoSkyra04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-tokyoSkyra04/anat/sub-tokyoSkyra04_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-tokyoSkyra04/anat/{sub-tokyoSkyra04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-tokyoSkyra04_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-tokyoSkyra04/anat/sub-tokyoSkyra04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json delete mode 100644 derivatives/labels/sub-tokyoSkyra04/anat/sub-tokyoSkyra04_space-other_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-tokyoSkyra05/anat/{sub-tokyoSkyra05_space-other_T1w_label-discs_dlabel.json => sub-tokyoSkyra05_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-tokyoSkyra05/anat/{sub-tokyoSkyra05_space-other_T1w_label-discs_dlabel.nii.gz => sub-tokyoSkyra05_T1w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-tokyoSkyra05/anat/sub-tokyoSkyra05_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-tokyoSkyra05/anat/{sub-tokyoSkyra05_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz => sub-tokyoSkyra05_T2star_label-discs_desc-warp_dlabel.nii.gz} (100%) rename derivatives/labels/sub-tokyoSkyra05/anat/{sub-tokyoSkyra05_space-other_T2w_label-discs_dlabel.json => sub-tokyoSkyra05_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-tokyoSkyra05/anat/{sub-tokyoSkyra05_space-other_T2w_label-discs_dlabel.nii.gz => sub-tokyoSkyra05_T2w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-tokyoSkyra05/anat/sub-tokyoSkyra05_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-tokyoSkyra05/anat/{sub-tokyoSkyra05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-tokyoSkyra05_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-tokyoSkyra05/anat/sub-tokyoSkyra05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-tokyoSkyra05/anat/sub-tokyoSkyra05_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-tokyoSkyra05/anat/{sub-tokyoSkyra05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-tokyoSkyra05_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-tokyoSkyra05/anat/sub-tokyoSkyra05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json delete mode 100644 derivatives/labels/sub-tokyoSkyra05/anat/sub-tokyoSkyra05_space-other_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-tokyoSkyra06/anat/{sub-tokyoSkyra06_space-other_T1w_label-discs_dlabel.json => sub-tokyoSkyra06_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-tokyoSkyra06/anat/{sub-tokyoSkyra06_space-other_T1w_label-discs_dlabel.nii.gz => sub-tokyoSkyra06_T1w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-tokyoSkyra06/anat/sub-tokyoSkyra06_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-tokyoSkyra06/anat/{sub-tokyoSkyra06_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz => sub-tokyoSkyra06_T2star_label-discs_desc-warp_dlabel.nii.gz} (100%) rename derivatives/labels/sub-tokyoSkyra06/anat/{sub-tokyoSkyra06_space-other_T2w_label-discs_dlabel.json => sub-tokyoSkyra06_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-tokyoSkyra06/anat/{sub-tokyoSkyra06_space-other_T2w_label-discs_dlabel.nii.gz => sub-tokyoSkyra06_T2w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-tokyoSkyra06/anat/sub-tokyoSkyra06_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-tokyoSkyra06/anat/{sub-tokyoSkyra06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-tokyoSkyra06_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-tokyoSkyra06/anat/sub-tokyoSkyra06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-tokyoSkyra06/anat/sub-tokyoSkyra06_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-tokyoSkyra06/anat/{sub-tokyoSkyra06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-tokyoSkyra06_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-tokyoSkyra06/anat/sub-tokyoSkyra06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json delete mode 100644 derivatives/labels/sub-tokyoSkyra06/anat/sub-tokyoSkyra06_space-other_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-tokyoSkyra07/anat/{sub-tokyoSkyra07_space-other_T1w_label-discs_dlabel.json => sub-tokyoSkyra07_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-tokyoSkyra07/anat/{sub-tokyoSkyra07_space-other_T1w_label-discs_dlabel.nii.gz => sub-tokyoSkyra07_T1w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-tokyoSkyra07/anat/sub-tokyoSkyra07_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-tokyoSkyra07/anat/{sub-tokyoSkyra07_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz => sub-tokyoSkyra07_T2star_label-discs_desc-warp_dlabel.nii.gz} (100%) rename derivatives/labels/sub-tokyoSkyra07/anat/{sub-tokyoSkyra07_space-other_T2w_label-discs_dlabel.json => sub-tokyoSkyra07_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-tokyoSkyra07/anat/{sub-tokyoSkyra07_space-other_T2w_label-discs_dlabel.nii.gz => sub-tokyoSkyra07_T2w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-tokyoSkyra07/anat/sub-tokyoSkyra07_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-tokyoSkyra07/anat/{sub-tokyoSkyra07_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-tokyoSkyra07_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-tokyoSkyra07/anat/sub-tokyoSkyra07_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-tokyoSkyra07/anat/sub-tokyoSkyra07_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-tokyoSkyra07/anat/{sub-tokyoSkyra07_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-tokyoSkyra07_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-tokyoSkyra07/anat/sub-tokyoSkyra07_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json delete mode 100644 derivatives/labels/sub-tokyoSkyra07/anat/sub-tokyoSkyra07_space-other_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-ubc01/anat/{sub-ubc01_space-other_T1w_label-discs_dlabel.json => sub-ubc01_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-ubc01/anat/{sub-ubc01_space-other_T1w_label-discs_dlabel.nii.gz => sub-ubc01_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-ubc01/anat/{sub-ubc01_space-other_T2w_label-discs_dlabel.json => sub-ubc01_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-ubc01/anat/{sub-ubc01_space-other_T2w_label-discs_dlabel.nii.gz => sub-ubc01_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-ubc02/anat/{sub-ubc02_space-other_T1w_label-discs_dlabel.json => sub-ubc02_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-ubc02/anat/{sub-ubc02_space-other_T1w_label-discs_dlabel.nii.gz => sub-ubc02_T1w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-ubc02/anat/sub-ubc02_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-ubc02/anat/{sub-ubc02_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz => sub-ubc02_T2star_label-discs_desc-warp_dlabel.nii.gz} (100%) rename derivatives/labels/sub-ubc02/anat/{sub-ubc02_space-other_T2w_label-discs_dlabel.json => sub-ubc02_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-ubc02/anat/{sub-ubc02_space-other_T2w_label-discs_dlabel.nii.gz => sub-ubc02_T2w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-ubc02/anat/sub-ubc02_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-ubc02/anat/{sub-ubc02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-ubc02_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-ubc02/anat/sub-ubc02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-ubc02/anat/sub-ubc02_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-ubc02/anat/{sub-ubc02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-ubc02_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-ubc02/anat/sub-ubc02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json delete mode 100644 derivatives/labels/sub-ubc02/anat/sub-ubc02_space-other_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-ubc03/anat/{sub-ubc03_space-other_T1w_label-discs_dlabel.json => sub-ubc03_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-ubc03/anat/{sub-ubc03_space-other_T1w_label-discs_dlabel.nii.gz => sub-ubc03_T1w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-ubc03/anat/sub-ubc03_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-ubc03/anat/{sub-ubc03_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz => sub-ubc03_T2star_label-discs_desc-warp_dlabel.nii.gz} (100%) rename derivatives/labels/sub-ubc03/anat/{sub-ubc03_space-other_T2w_label-discs_dlabel.json => sub-ubc03_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-ubc03/anat/{sub-ubc03_space-other_T2w_label-discs_dlabel.nii.gz => sub-ubc03_T2w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-ubc03/anat/sub-ubc03_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-ubc03/anat/{sub-ubc03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-ubc03_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-ubc03/anat/sub-ubc03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-ubc03/anat/sub-ubc03_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-ubc03/anat/{sub-ubc03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-ubc03_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-ubc03/anat/sub-ubc03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json delete mode 100644 derivatives/labels/sub-ubc03/anat/sub-ubc03_space-other_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-ubc04/anat/{sub-ubc04_space-other_T1w_label-discs_dlabel.json => sub-ubc04_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-ubc04/anat/{sub-ubc04_space-other_T1w_label-discs_dlabel.nii.gz => sub-ubc04_T1w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-ubc04/anat/sub-ubc04_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-ubc04/anat/{sub-ubc04_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz => sub-ubc04_T2star_label-discs_desc-warp_dlabel.nii.gz} (100%) rename derivatives/labels/sub-ubc04/anat/{sub-ubc04_space-other_T2w_label-discs_dlabel.json => sub-ubc04_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-ubc04/anat/{sub-ubc04_space-other_T2w_label-discs_dlabel.nii.gz => sub-ubc04_T2w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-ubc04/anat/sub-ubc04_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-ubc04/anat/{sub-ubc04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-ubc04_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-ubc04/anat/sub-ubc04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-ubc04/anat/sub-ubc04_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-ubc04/anat/{sub-ubc04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-ubc04_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-ubc04/anat/sub-ubc04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json delete mode 100644 derivatives/labels/sub-ubc04/anat/sub-ubc04_space-other_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-ubc05/anat/{sub-ubc05_space-other_T1w_label-discs_dlabel.json => sub-ubc05_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-ubc05/anat/{sub-ubc05_space-other_T1w_label-discs_dlabel.nii.gz => sub-ubc05_T1w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-ubc05/anat/sub-ubc05_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-ubc05/anat/{sub-ubc05_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz => sub-ubc05_T2star_label-discs_desc-warp_dlabel.nii.gz} (100%) rename derivatives/labels/sub-ubc05/anat/{sub-ubc05_space-other_T2w_label-discs_dlabel.json => sub-ubc05_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-ubc05/anat/{sub-ubc05_space-other_T2w_label-discs_dlabel.nii.gz => sub-ubc05_T2w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-ubc05/anat/sub-ubc05_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-ubc05/anat/{sub-ubc05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-ubc05_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-ubc05/anat/sub-ubc05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-ubc05/anat/sub-ubc05_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-ubc05/anat/{sub-ubc05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-ubc05_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-ubc05/anat/sub-ubc05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json delete mode 100644 derivatives/labels/sub-ubc05/anat/sub-ubc05_space-other_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-ubc06/anat/{sub-ubc06_space-other_T1w_label-discs_dlabel.json => sub-ubc06_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-ubc06/anat/{sub-ubc06_space-other_T1w_label-discs_dlabel.nii.gz => sub-ubc06_T1w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-ubc06/anat/sub-ubc06_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-ubc06/anat/{sub-ubc06_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz => sub-ubc06_T2star_label-discs_desc-warp_dlabel.nii.gz} (100%) rename derivatives/labels/sub-ubc06/anat/{sub-ubc06_space-other_T2w_label-discs_dlabel.json => sub-ubc06_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-ubc06/anat/{sub-ubc06_space-other_T2w_label-discs_dlabel.nii.gz => sub-ubc06_T2w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-ubc06/anat/sub-ubc06_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-ubc06/anat/{sub-ubc06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-ubc06_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-ubc06/anat/sub-ubc06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-ubc06/anat/sub-ubc06_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-ubc06/anat/{sub-ubc06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-ubc06_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-ubc06/anat/sub-ubc06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json delete mode 100644 derivatives/labels/sub-ubc06/anat/sub-ubc06_space-other_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-ucdavis01/anat/{sub-ucdavis01_space-other_T1w_label-discs_dlabel.json => sub-ucdavis01_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-ucdavis01/anat/{sub-ucdavis01_space-other_T1w_label-discs_dlabel.nii.gz => sub-ucdavis01_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-ucdavis01/anat/{sub-ucdavis01_space-other_T2w_label-discs_dlabel.json => sub-ucdavis01_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-ucdavis01/anat/{sub-ucdavis01_space-other_T2w_label-discs_dlabel.nii.gz => sub-ucdavis01_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-ucdavis02/anat/{sub-ucdavis02_space-other_T1w_label-discs_dlabel.json => sub-ucdavis02_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-ucdavis02/anat/{sub-ucdavis02_space-other_T1w_label-discs_dlabel.nii.gz => sub-ucdavis02_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-ucdavis02/anat/{sub-ucdavis02_space-other_T2w_label-discs_dlabel.json => sub-ucdavis02_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-ucdavis02/anat/{sub-ucdavis02_space-other_T2w_label-discs_dlabel.nii.gz => sub-ucdavis02_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-ucdavis03/anat/{sub-ucdavis03_space-other_T1w_label-discs_dlabel.json => sub-ucdavis03_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-ucdavis03/anat/{sub-ucdavis03_space-other_T1w_label-discs_dlabel.nii.gz => sub-ucdavis03_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-ucdavis03/anat/{sub-ucdavis03_space-other_T2w_label-discs_dlabel.json => sub-ucdavis03_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-ucdavis03/anat/{sub-ucdavis03_space-other_T2w_label-discs_dlabel.nii.gz => sub-ucdavis03_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-ucdavis04/anat/{sub-ucdavis04_space-other_T1w_label-discs_dlabel.json => sub-ucdavis04_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-ucdavis04/anat/{sub-ucdavis04_space-other_T1w_label-discs_dlabel.nii.gz => sub-ucdavis04_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-ucdavis04/anat/{sub-ucdavis04_space-other_T2w_label-discs_dlabel.json => sub-ucdavis04_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-ucdavis04/anat/{sub-ucdavis04_space-other_T2w_label-discs_dlabel.nii.gz => sub-ucdavis04_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-ucdavis05/anat/{sub-ucdavis05_space-other_T1w_label-discs_dlabel.json => sub-ucdavis05_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-ucdavis05/anat/{sub-ucdavis05_space-other_T1w_label-discs_dlabel.nii.gz => sub-ucdavis05_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-ucdavis05/anat/{sub-ucdavis05_space-other_T2w_label-discs_dlabel.json => sub-ucdavis05_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-ucdavis05/anat/{sub-ucdavis05_space-other_T2w_label-discs_dlabel.nii.gz => sub-ucdavis05_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-ucdavis06/anat/{sub-ucdavis06_space-other_T1w_label-discs_dlabel.json => sub-ucdavis06_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-ucdavis06/anat/{sub-ucdavis06_space-other_T1w_label-discs_dlabel.nii.gz => sub-ucdavis06_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-ucdavis06/anat/{sub-ucdavis06_space-other_T2w_label-discs_dlabel.json => sub-ucdavis06_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-ucdavis06/anat/{sub-ucdavis06_space-other_T2w_label-discs_dlabel.nii.gz => sub-ucdavis06_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-ucdavis07/anat/{sub-ucdavis07_space-other_T1w_label-discs_dlabel.json => sub-ucdavis07_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-ucdavis07/anat/{sub-ucdavis07_space-other_T1w_label-discs_dlabel.nii.gz => sub-ucdavis07_T1w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-ucdavis07/anat/{sub-ucdavis07_space-other_T2w_label-discs_dlabel.json => sub-ucdavis07_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-ucdavis07/anat/{sub-ucdavis07_space-other_T2w_label-discs_dlabel.nii.gz => sub-ucdavis07_T2w_label-discs_dlabel.nii.gz} (100%) rename derivatives/labels/sub-ucl01/anat/{sub-ucl01_space-other_T1w_label-discs_dlabel.json => sub-ucl01_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-ucl01/anat/{sub-ucl01_space-other_T1w_label-discs_dlabel.nii.gz => sub-ucl01_T1w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-ucl01/anat/sub-ucl01_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-ucl01/anat/{sub-ucl01_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz => sub-ucl01_T2star_label-discs_desc-warp_dlabel.nii.gz} (100%) rename derivatives/labels/sub-ucl01/anat/{sub-ucl01_space-other_T2w_label-discs_dlabel.json => sub-ucl01_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-ucl01/anat/{sub-ucl01_space-other_T2w_label-discs_dlabel.nii.gz => sub-ucl01_T2w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-ucl01/anat/sub-ucl01_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-ucl01/anat/{sub-ucl01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-ucl01_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-ucl01/anat/sub-ucl01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-ucl01/anat/sub-ucl01_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-ucl01/anat/{sub-ucl01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-ucl01_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 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derivatives/labels/sub-ucl02/anat/{sub-ucl02_space-other_T2w_label-discs_dlabel.nii.gz => sub-ucl02_T2w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-ucl02/anat/sub-ucl02_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-ucl02/anat/{sub-ucl02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-ucl02_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-ucl02/anat/sub-ucl02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-ucl02/anat/sub-ucl02_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-ucl02/anat/{sub-ucl02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-ucl02_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 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derivatives/labels/sub-ucl03/anat/{sub-ucl03_space-other_T2w_label-discs_dlabel.nii.gz => sub-ucl03_T2w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-ucl03/anat/sub-ucl03_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-ucl03/anat/{sub-ucl03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-ucl03_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-ucl03/anat/sub-ucl03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-ucl03/anat/sub-ucl03_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-ucl03/anat/{sub-ucl03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-ucl03_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 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derivatives/labels/sub-ucl04/anat/{sub-ucl04_space-other_T2w_label-discs_dlabel.nii.gz => sub-ucl04_T2w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-ucl04/anat/sub-ucl04_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-ucl04/anat/{sub-ucl04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-ucl04_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-ucl04/anat/sub-ucl04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-ucl04/anat/sub-ucl04_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-ucl04/anat/{sub-ucl04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-ucl04_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 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derivatives/labels/sub-ucl05/anat/{sub-ucl05_space-other_T2w_label-discs_dlabel.nii.gz => sub-ucl05_T2w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-ucl05/anat/sub-ucl05_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-ucl05/anat/{sub-ucl05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-ucl05_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-ucl05/anat/sub-ucl05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-ucl05/anat/sub-ucl05_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-ucl05/anat/{sub-ucl05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-ucl05_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 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derivatives/labels/sub-ucl06/anat/{sub-ucl06_space-other_T2w_label-discs_dlabel.nii.gz => sub-ucl06_T2w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-ucl06/anat/sub-ucl06_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-ucl06/anat/{sub-ucl06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-ucl06_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-ucl06/anat/sub-ucl06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-ucl06/anat/sub-ucl06_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-ucl06/anat/{sub-ucl06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-ucl06_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 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derivatives/labels/sub-unf01/anat/{sub-unf01_space-other_T2w_label-discs_dlabel.nii.gz => sub-unf01_T2w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-unf01/anat/sub-unf01_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-unf01/anat/{sub-unf01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-unf01_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-unf01/anat/sub-unf01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-unf01/anat/sub-unf01_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-unf01/anat/{sub-unf01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-unf01_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 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derivatives/labels/sub-unf02/anat/{sub-unf02_space-other_T2w_label-discs_dlabel.nii.gz => sub-unf02_T2w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-unf02/anat/sub-unf02_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-unf02/anat/{sub-unf02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-unf02_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-unf02/anat/sub-unf02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-unf02/anat/sub-unf02_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-unf02/anat/{sub-unf02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-unf02_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-unf02/anat/sub-unf02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json delete mode 100644 derivatives/labels/sub-unf02/anat/sub-unf02_space-other_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-unf03/anat/{sub-unf03_space-other_T1w_label-discs_dlabel.json => sub-unf03_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-unf03/anat/{sub-unf03_space-other_T1w_label-discs_dlabel.nii.gz => sub-unf03_T1w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-unf03/anat/sub-unf03_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-unf03/anat/{sub-unf03_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz => sub-unf03_T2star_label-discs_desc-warp_dlabel.nii.gz} (100%) rename derivatives/labels/sub-unf03/anat/{sub-unf03_space-other_T2w_label-discs_dlabel.json => sub-unf03_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-unf03/anat/{sub-unf03_space-other_T2w_label-discs_dlabel.nii.gz => sub-unf03_T2w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-unf03/anat/sub-unf03_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-unf03/anat/{sub-unf03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-unf03_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-unf03/anat/sub-unf03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-unf03/anat/sub-unf03_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-unf03/anat/{sub-unf03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-unf03_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-unf03/anat/sub-unf03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json delete mode 100644 derivatives/labels/sub-unf03/anat/sub-unf03_space-other_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-unf04/anat/{sub-unf04_space-other_T1w_label-discs_dlabel.json => sub-unf04_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-unf04/anat/{sub-unf04_space-other_T1w_label-discs_dlabel.nii.gz => sub-unf04_T1w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-unf04/anat/sub-unf04_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-unf04/anat/{sub-unf04_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz => sub-unf04_T2star_label-discs_desc-warp_dlabel.nii.gz} (100%) rename derivatives/labels/sub-unf04/anat/{sub-unf04_space-other_T2w_label-discs_dlabel.json => sub-unf04_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-unf04/anat/{sub-unf04_space-other_T2w_label-discs_dlabel.nii.gz => sub-unf04_T2w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-unf04/anat/sub-unf04_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-unf04/anat/{sub-unf04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-unf04_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-unf04/anat/sub-unf04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-unf04/anat/sub-unf04_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-unf04/anat/{sub-unf04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-unf04_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 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derivatives/labels/sub-unf05/anat/{sub-unf05_space-other_T2w_label-discs_dlabel.nii.gz => sub-unf05_T2w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-unf05/anat/sub-unf05_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-unf05/anat/{sub-unf05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-unf05_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-unf05/anat/sub-unf05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-unf05/anat/sub-unf05_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-unf05/anat/{sub-unf05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-unf05_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-unf05/anat/sub-unf05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json delete mode 100644 derivatives/labels/sub-unf05/anat/sub-unf05_space-other_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-unf06/anat/{sub-unf06_space-other_T1w_label-discs_dlabel.json => sub-unf06_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-unf06/anat/{sub-unf06_space-other_T1w_label-discs_dlabel.nii.gz => sub-unf06_T1w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-unf06/anat/sub-unf06_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-unf06/anat/{sub-unf06_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz => sub-unf06_T2star_label-discs_desc-warp_dlabel.nii.gz} (100%) rename derivatives/labels/sub-unf06/anat/{sub-unf06_space-other_T2w_label-discs_dlabel.json => sub-unf06_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-unf06/anat/{sub-unf06_space-other_T2w_label-discs_dlabel.nii.gz => sub-unf06_T2w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-unf06/anat/sub-unf06_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-unf06/anat/{sub-unf06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-unf06_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-unf06/anat/sub-unf06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-unf06/anat/sub-unf06_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-unf06/anat/{sub-unf06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-unf06_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 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derivatives/labels/sub-unf07/anat/{sub-unf07_space-other_T2w_label-discs_dlabel.nii.gz => sub-unf07_T2w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-unf07/anat/sub-unf07_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-unf07/anat/{sub-unf07_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-unf07_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-unf07/anat/sub-unf07_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-unf07/anat/sub-unf07_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-unf07/anat/{sub-unf07_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-unf07_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-unf07/anat/sub-unf07_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json delete mode 100644 derivatives/labels/sub-unf07/anat/sub-unf07_space-other_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-vallHebron01/anat/{sub-vallHebron01_space-other_T1w_label-discs_dlabel.json => sub-vallHebron01_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-vallHebron01/anat/{sub-vallHebron01_space-other_T1w_label-discs_dlabel.nii.gz => sub-vallHebron01_T1w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-vallHebron01/anat/sub-vallHebron01_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-vallHebron01/anat/{sub-vallHebron01_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz => sub-vallHebron01_T2star_label-discs_desc-warp_dlabel.nii.gz} (100%) rename derivatives/labels/sub-vallHebron01/anat/{sub-vallHebron01_space-other_T2w_label-discs_dlabel.json => sub-vallHebron01_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-vallHebron01/anat/{sub-vallHebron01_space-other_T2w_label-discs_dlabel.nii.gz => sub-vallHebron01_T2w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-vallHebron01/anat/sub-vallHebron01_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-vallHebron01/anat/{sub-vallHebron01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-vallHebron01_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-vallHebron01/anat/sub-vallHebron01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-vallHebron01/anat/sub-vallHebron01_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-vallHebron01/anat/{sub-vallHebron01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-vallHebron01_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-vallHebron01/anat/sub-vallHebron01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json delete mode 100644 derivatives/labels/sub-vallHebron01/anat/sub-vallHebron01_space-other_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-vallHebron02/anat/{sub-vallHebron02_space-other_T1w_label-discs_dlabel.json => sub-vallHebron02_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-vallHebron02/anat/{sub-vallHebron02_space-other_T1w_label-discs_dlabel.nii.gz => sub-vallHebron02_T1w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-vallHebron02/anat/sub-vallHebron02_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-vallHebron02/anat/{sub-vallHebron02_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz => sub-vallHebron02_T2star_label-discs_desc-warp_dlabel.nii.gz} (100%) rename derivatives/labels/sub-vallHebron02/anat/{sub-vallHebron02_space-other_T2w_label-discs_dlabel.json => sub-vallHebron02_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-vallHebron02/anat/{sub-vallHebron02_space-other_T2w_label-discs_dlabel.nii.gz => sub-vallHebron02_T2w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-vallHebron02/anat/sub-vallHebron02_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-vallHebron02/anat/{sub-vallHebron02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-vallHebron02_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-vallHebron02/anat/sub-vallHebron02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-vallHebron02/anat/sub-vallHebron02_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-vallHebron02/anat/{sub-vallHebron02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-vallHebron02_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-vallHebron02/anat/sub-vallHebron02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json delete mode 100644 derivatives/labels/sub-vallHebron02/anat/sub-vallHebron02_space-other_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-vallHebron03/anat/{sub-vallHebron03_space-other_T1w_label-discs_dlabel.json => sub-vallHebron03_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-vallHebron03/anat/{sub-vallHebron03_space-other_T1w_label-discs_dlabel.nii.gz => sub-vallHebron03_T1w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-vallHebron03/anat/sub-vallHebron03_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-vallHebron03/anat/{sub-vallHebron03_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz => sub-vallHebron03_T2star_label-discs_desc-warp_dlabel.nii.gz} (100%) rename derivatives/labels/sub-vallHebron03/anat/{sub-vallHebron03_space-other_T2w_label-discs_dlabel.json => sub-vallHebron03_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-vallHebron03/anat/{sub-vallHebron03_space-other_T2w_label-discs_dlabel.nii.gz => sub-vallHebron03_T2w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-vallHebron03/anat/sub-vallHebron03_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-vallHebron03/anat/{sub-vallHebron03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-vallHebron03_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-vallHebron03/anat/sub-vallHebron03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-vallHebron03/anat/sub-vallHebron03_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-vallHebron03/anat/{sub-vallHebron03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-vallHebron03_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-vallHebron03/anat/sub-vallHebron03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-vallHebron03/anat/sub-vallHebron03_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.json rename derivatives/labels/sub-vallHebron03/anat/{sub-vallHebron03_space-other_T1w_RPI_r_labels-manual.nii.gz => sub-vallHebron03_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-vallHebron03/anat/sub-vallHebron03_space-other_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-vallHebron04/anat/{sub-vallHebron04_space-other_T1w_label-discs_dlabel.json => sub-vallHebron04_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-vallHebron04/anat/{sub-vallHebron04_space-other_T1w_label-discs_dlabel.nii.gz => sub-vallHebron04_T1w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-vallHebron04/anat/sub-vallHebron04_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-vallHebron04/anat/{sub-vallHebron04_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz => sub-vallHebron04_T2star_label-discs_desc-warp_dlabel.nii.gz} (100%) rename derivatives/labels/sub-vallHebron04/anat/{sub-vallHebron04_space-other_T2w_label-discs_dlabel.json => sub-vallHebron04_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-vallHebron04/anat/{sub-vallHebron04_space-other_T2w_label-discs_dlabel.nii.gz => sub-vallHebron04_T2w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-vallHebron04/anat/sub-vallHebron04_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-vallHebron04/anat/{sub-vallHebron04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-vallHebron04_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-vallHebron04/anat/sub-vallHebron04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-vallHebron04/anat/sub-vallHebron04_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-vallHebron04/anat/{sub-vallHebron04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-vallHebron04_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-vallHebron04/anat/sub-vallHebron04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json delete mode 100644 derivatives/labels/sub-vallHebron04/anat/sub-vallHebron04_space-other_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-vallHebron05/anat/{sub-vallHebron05_space-other_T1w_label-discs_dlabel.json => sub-vallHebron05_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-vallHebron05/anat/{sub-vallHebron05_space-other_T1w_label-discs_dlabel.nii.gz => sub-vallHebron05_T1w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-vallHebron05/anat/sub-vallHebron05_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-vallHebron05/anat/{sub-vallHebron05_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz => sub-vallHebron05_T2star_label-discs_desc-warp_dlabel.nii.gz} (100%) rename derivatives/labels/sub-vallHebron05/anat/{sub-vallHebron05_space-other_T2w_label-discs_dlabel.json => sub-vallHebron05_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-vallHebron05/anat/{sub-vallHebron05_space-other_T2w_label-discs_dlabel.nii.gz => sub-vallHebron05_T2w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-vallHebron05/anat/sub-vallHebron05_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-vallHebron05/anat/{sub-vallHebron05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-vallHebron05_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-vallHebron05/anat/sub-vallHebron05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-vallHebron05/anat/sub-vallHebron05_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-vallHebron05/anat/{sub-vallHebron05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-vallHebron05_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-vallHebron05/anat/sub-vallHebron05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json delete mode 100644 derivatives/labels/sub-vallHebron05/anat/sub-vallHebron05_space-other_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-vallHebron06/anat/{sub-vallHebron06_space-other_T1w_label-discs_dlabel.json => sub-vallHebron06_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-vallHebron06/anat/{sub-vallHebron06_space-other_T1w_label-discs_dlabel.nii.gz => sub-vallHebron06_T1w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-vallHebron06/anat/sub-vallHebron06_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-vallHebron06/anat/{sub-vallHebron06_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz => sub-vallHebron06_T2star_label-discs_desc-warp_dlabel.nii.gz} (100%) rename derivatives/labels/sub-vallHebron06/anat/{sub-vallHebron06_space-other_T2w_label-discs_dlabel.json => sub-vallHebron06_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-vallHebron06/anat/{sub-vallHebron06_space-other_T2w_label-discs_dlabel.nii.gz => sub-vallHebron06_T2w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-vallHebron06/anat/sub-vallHebron06_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-vallHebron06/anat/{sub-vallHebron06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-vallHebron06_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-vallHebron06/anat/sub-vallHebron06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-vallHebron06/anat/sub-vallHebron06_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-vallHebron06/anat/{sub-vallHebron06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-vallHebron06_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-vallHebron06/anat/sub-vallHebron06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json delete mode 100644 derivatives/labels/sub-vallHebron06/anat/sub-vallHebron06_space-other_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-vallHebron07/anat/{sub-vallHebron07_space-other_T1w_label-discs_dlabel.json => sub-vallHebron07_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-vallHebron07/anat/{sub-vallHebron07_space-other_T1w_label-discs_dlabel.nii.gz => sub-vallHebron07_T1w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-vallHebron07/anat/sub-vallHebron07_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-vallHebron07/anat/{sub-vallHebron07_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz => sub-vallHebron07_T2star_label-discs_desc-warp_dlabel.nii.gz} (100%) rename derivatives/labels/sub-vallHebron07/anat/{sub-vallHebron07_space-other_T2w_label-discs_dlabel.json => sub-vallHebron07_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-vallHebron07/anat/{sub-vallHebron07_space-other_T2w_label-discs_dlabel.nii.gz => sub-vallHebron07_T2w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-vallHebron07/anat/sub-vallHebron07_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-vallHebron07/anat/{sub-vallHebron07_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-vallHebron07_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-vallHebron07/anat/sub-vallHebron07_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-vallHebron07/anat/sub-vallHebron07_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-vallHebron07/anat/{sub-vallHebron07_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-vallHebron07_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-vallHebron07/anat/sub-vallHebron07_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-vallHebron07/anat/sub-vallHebron07_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.json rename derivatives/labels/sub-vallHebron07/anat/{sub-vallHebron07_space-other_T1w_RPI_r_labels-manual.nii.gz => sub-vallHebron07_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-vallHebron07/anat/sub-vallHebron07_space-other_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-vuiisAchieva01/anat/{sub-vuiisAchieva01_space-other_T1w_label-discs_dlabel.json => sub-vuiisAchieva01_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-vuiisAchieva01/anat/{sub-vuiisAchieva01_space-other_T1w_label-discs_dlabel.nii.gz => sub-vuiisAchieva01_T1w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-vuiisAchieva01/anat/sub-vuiisAchieva01_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-vuiisAchieva01/anat/{sub-vuiisAchieva01_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz => sub-vuiisAchieva01_T2star_label-discs_desc-warp_dlabel.nii.gz} (100%) rename derivatives/labels/sub-vuiisAchieva01/anat/{sub-vuiisAchieva01_space-other_T2w_label-discs_dlabel.json => sub-vuiisAchieva01_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-vuiisAchieva01/anat/{sub-vuiisAchieva01_space-other_T2w_label-discs_dlabel.nii.gz => sub-vuiisAchieva01_T2w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-vuiisAchieva01/anat/sub-vuiisAchieva01_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-vuiisAchieva01/anat/{sub-vuiisAchieva01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-vuiisAchieva01_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-vuiisAchieva01/anat/sub-vuiisAchieva01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-vuiisAchieva01/anat/sub-vuiisAchieva01_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-vuiisAchieva01/anat/{sub-vuiisAchieva01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-vuiisAchieva01_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-vuiisAchieva01/anat/sub-vuiisAchieva01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json delete mode 100644 derivatives/labels/sub-vuiisAchieva01/anat/sub-vuiisAchieva01_space-other_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-vuiisAchieva02/anat/{sub-vuiisAchieva02_space-other_T1w_label-discs_dlabel.json => sub-vuiisAchieva02_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-vuiisAchieva02/anat/{sub-vuiisAchieva02_space-other_T1w_label-discs_dlabel.nii.gz => sub-vuiisAchieva02_T1w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-vuiisAchieva02/anat/sub-vuiisAchieva02_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-vuiisAchieva02/anat/{sub-vuiisAchieva02_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz => sub-vuiisAchieva02_T2star_label-discs_desc-warp_dlabel.nii.gz} (100%) rename derivatives/labels/sub-vuiisAchieva02/anat/{sub-vuiisAchieva02_space-other_T2w_label-discs_dlabel.json => sub-vuiisAchieva02_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-vuiisAchieva02/anat/{sub-vuiisAchieva02_space-other_T2w_label-discs_dlabel.nii.gz => sub-vuiisAchieva02_T2w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-vuiisAchieva02/anat/sub-vuiisAchieva02_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-vuiisAchieva02/anat/{sub-vuiisAchieva02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-vuiisAchieva02_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-vuiisAchieva02/anat/sub-vuiisAchieva02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-vuiisAchieva02/anat/sub-vuiisAchieva02_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-vuiisAchieva02/anat/{sub-vuiisAchieva02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-vuiisAchieva02_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-vuiisAchieva02/anat/sub-vuiisAchieva02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json delete mode 100644 derivatives/labels/sub-vuiisAchieva02/anat/sub-vuiisAchieva02_space-other_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-vuiisAchieva03/anat/{sub-vuiisAchieva03_space-other_T1w_label-discs_dlabel.json => sub-vuiisAchieva03_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-vuiisAchieva03/anat/{sub-vuiisAchieva03_space-other_T1w_label-discs_dlabel.nii.gz => sub-vuiisAchieva03_T1w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-vuiisAchieva03/anat/sub-vuiisAchieva03_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-vuiisAchieva03/anat/{sub-vuiisAchieva03_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz => sub-vuiisAchieva03_T2star_label-discs_desc-warp_dlabel.nii.gz} (100%) rename derivatives/labels/sub-vuiisAchieva03/anat/{sub-vuiisAchieva03_space-other_T2w_label-discs_dlabel.json => sub-vuiisAchieva03_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-vuiisAchieva03/anat/{sub-vuiisAchieva03_space-other_T2w_label-discs_dlabel.nii.gz => sub-vuiisAchieva03_T2w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-vuiisAchieva03/anat/sub-vuiisAchieva03_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-vuiisAchieva03/anat/{sub-vuiisAchieva03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-vuiisAchieva03_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-vuiisAchieva03/anat/sub-vuiisAchieva03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-vuiisAchieva03/anat/sub-vuiisAchieva03_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-vuiisAchieva03/anat/{sub-vuiisAchieva03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-vuiisAchieva03_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-vuiisAchieva03/anat/sub-vuiisAchieva03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json delete mode 100644 derivatives/labels/sub-vuiisAchieva03/anat/sub-vuiisAchieva03_space-other_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-vuiisAchieva04/anat/{sub-vuiisAchieva04_space-other_T1w_label-discs_dlabel.json => sub-vuiisAchieva04_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-vuiisAchieva04/anat/{sub-vuiisAchieva04_space-other_T1w_label-discs_dlabel.nii.gz => sub-vuiisAchieva04_T1w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-vuiisAchieva04/anat/sub-vuiisAchieva04_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-vuiisAchieva04/anat/{sub-vuiisAchieva04_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz => sub-vuiisAchieva04_T2star_label-discs_desc-warp_dlabel.nii.gz} (100%) rename derivatives/labels/sub-vuiisAchieva04/anat/{sub-vuiisAchieva04_space-other_T2w_label-discs_dlabel.json => sub-vuiisAchieva04_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-vuiisAchieva04/anat/{sub-vuiisAchieva04_space-other_T2w_label-discs_dlabel.nii.gz => sub-vuiisAchieva04_T2w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-vuiisAchieva04/anat/sub-vuiisAchieva04_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-vuiisAchieva04/anat/{sub-vuiisAchieva04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-vuiisAchieva04_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-vuiisAchieva04/anat/sub-vuiisAchieva04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-vuiisAchieva04/anat/sub-vuiisAchieva04_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-vuiisAchieva04/anat/{sub-vuiisAchieva04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-vuiisAchieva04_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-vuiisAchieva04/anat/sub-vuiisAchieva04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json delete mode 100644 derivatives/labels/sub-vuiisAchieva04/anat/sub-vuiisAchieva04_space-other_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-vuiisAchieva05/anat/{sub-vuiisAchieva05_space-other_T1w_label-discs_dlabel.json => sub-vuiisAchieva05_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-vuiisAchieva05/anat/{sub-vuiisAchieva05_space-other_T1w_label-discs_dlabel.nii.gz => sub-vuiisAchieva05_T1w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-vuiisAchieva05/anat/sub-vuiisAchieva05_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-vuiisAchieva05/anat/{sub-vuiisAchieva05_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz => sub-vuiisAchieva05_T2star_label-discs_desc-warp_dlabel.nii.gz} (100%) rename derivatives/labels/sub-vuiisAchieva05/anat/{sub-vuiisAchieva05_space-other_T2w_label-discs_dlabel.json => sub-vuiisAchieva05_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-vuiisAchieva05/anat/{sub-vuiisAchieva05_space-other_T2w_label-discs_dlabel.nii.gz => sub-vuiisAchieva05_T2w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-vuiisAchieva05/anat/sub-vuiisAchieva05_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-vuiisAchieva05/anat/{sub-vuiisAchieva05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-vuiisAchieva05_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-vuiisAchieva05/anat/sub-vuiisAchieva05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-vuiisAchieva05/anat/sub-vuiisAchieva05_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-vuiisAchieva05/anat/{sub-vuiisAchieva05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-vuiisAchieva05_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-vuiisAchieva05/anat/sub-vuiisAchieva05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json delete mode 100644 derivatives/labels/sub-vuiisAchieva05/anat/sub-vuiisAchieva05_space-other_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-vuiisAchieva06/anat/{sub-vuiisAchieva06_space-other_T1w_label-discs_dlabel.json => sub-vuiisAchieva06_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-vuiisAchieva06/anat/{sub-vuiisAchieva06_space-other_T1w_label-discs_dlabel.nii.gz => sub-vuiisAchieva06_T1w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-vuiisAchieva06/anat/sub-vuiisAchieva06_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-vuiisAchieva06/anat/{sub-vuiisAchieva06_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz => sub-vuiisAchieva06_T2star_label-discs_desc-warp_dlabel.nii.gz} (100%) rename derivatives/labels/sub-vuiisAchieva06/anat/{sub-vuiisAchieva06_space-other_T2w_label-discs_dlabel.json => sub-vuiisAchieva06_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-vuiisAchieva06/anat/{sub-vuiisAchieva06_space-other_T2w_label-discs_dlabel.nii.gz => sub-vuiisAchieva06_T2w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-vuiisAchieva06/anat/sub-vuiisAchieva06_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-vuiisAchieva06/anat/{sub-vuiisAchieva06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-vuiisAchieva06_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-vuiisAchieva06/anat/sub-vuiisAchieva06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-vuiisAchieva06/anat/sub-vuiisAchieva06_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-vuiisAchieva06/anat/{sub-vuiisAchieva06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-vuiisAchieva06_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-vuiisAchieva06/anat/sub-vuiisAchieva06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json delete mode 100644 derivatives/labels/sub-vuiisAchieva06/anat/sub-vuiisAchieva06_space-other_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-vuiisIngenia01/anat/{sub-vuiisIngenia01_space-other_T1w_label-discs_dlabel.json => sub-vuiisIngenia01_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-vuiisIngenia01/anat/{sub-vuiisIngenia01_space-other_T1w_label-discs_dlabel.nii.gz => sub-vuiisIngenia01_T1w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-vuiisIngenia01/anat/sub-vuiisIngenia01_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-vuiisIngenia01/anat/{sub-vuiisIngenia01_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz => sub-vuiisIngenia01_T2star_label-discs_desc-warp_dlabel.nii.gz} (100%) rename derivatives/labels/sub-vuiisIngenia01/anat/{sub-vuiisIngenia01_space-other_T2w_label-discs_dlabel.json => sub-vuiisIngenia01_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-vuiisIngenia01/anat/{sub-vuiisIngenia01_space-other_T2w_label-discs_dlabel.nii.gz => sub-vuiisIngenia01_T2w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-vuiisIngenia01/anat/sub-vuiisIngenia01_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-vuiisIngenia01/anat/{sub-vuiisIngenia01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-vuiisIngenia01_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-vuiisIngenia01/anat/sub-vuiisIngenia01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-vuiisIngenia01/anat/sub-vuiisIngenia01_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-vuiisIngenia01/anat/{sub-vuiisIngenia01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-vuiisIngenia01_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-vuiisIngenia01/anat/sub-vuiisIngenia01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json delete mode 100644 derivatives/labels/sub-vuiisIngenia01/anat/sub-vuiisIngenia01_space-other_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-vuiisIngenia02/anat/{sub-vuiisIngenia02_space-other_T1w_label-discs_dlabel.json => sub-vuiisIngenia02_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-vuiisIngenia02/anat/{sub-vuiisIngenia02_space-other_T1w_label-discs_dlabel.nii.gz => sub-vuiisIngenia02_T1w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-vuiisIngenia02/anat/sub-vuiisIngenia02_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-vuiisIngenia02/anat/{sub-vuiisIngenia02_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz => sub-vuiisIngenia02_T2star_label-discs_desc-warp_dlabel.nii.gz} (100%) rename derivatives/labels/sub-vuiisIngenia02/anat/{sub-vuiisIngenia02_space-other_T2w_label-discs_dlabel.json => sub-vuiisIngenia02_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-vuiisIngenia02/anat/{sub-vuiisIngenia02_space-other_T2w_label-discs_dlabel.nii.gz => sub-vuiisIngenia02_T2w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-vuiisIngenia02/anat/sub-vuiisIngenia02_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-vuiisIngenia02/anat/{sub-vuiisIngenia02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-vuiisIngenia02_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-vuiisIngenia02/anat/sub-vuiisIngenia02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-vuiisIngenia02/anat/sub-vuiisIngenia02_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-vuiisIngenia02/anat/{sub-vuiisIngenia02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-vuiisIngenia02_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-vuiisIngenia02/anat/sub-vuiisIngenia02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json delete mode 100644 derivatives/labels/sub-vuiisIngenia02/anat/sub-vuiisIngenia02_space-other_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-vuiisIngenia03/anat/{sub-vuiisIngenia03_space-other_T1w_label-discs_dlabel.json => sub-vuiisIngenia03_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-vuiisIngenia03/anat/{sub-vuiisIngenia03_space-other_T1w_label-discs_dlabel.nii.gz => sub-vuiisIngenia03_T1w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-vuiisIngenia03/anat/sub-vuiisIngenia03_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-vuiisIngenia03/anat/{sub-vuiisIngenia03_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz => sub-vuiisIngenia03_T2star_label-discs_desc-warp_dlabel.nii.gz} (100%) rename derivatives/labels/sub-vuiisIngenia03/anat/{sub-vuiisIngenia03_space-other_T2w_label-discs_dlabel.json => sub-vuiisIngenia03_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-vuiisIngenia03/anat/{sub-vuiisIngenia03_space-other_T2w_label-discs_dlabel.nii.gz => sub-vuiisIngenia03_T2w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-vuiisIngenia03/anat/sub-vuiisIngenia03_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-vuiisIngenia03/anat/{sub-vuiisIngenia03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-vuiisIngenia03_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-vuiisIngenia03/anat/sub-vuiisIngenia03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-vuiisIngenia03/anat/sub-vuiisIngenia03_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-vuiisIngenia03/anat/{sub-vuiisIngenia03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-vuiisIngenia03_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-vuiisIngenia03/anat/sub-vuiisIngenia03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json delete mode 100644 derivatives/labels/sub-vuiisIngenia03/anat/sub-vuiisIngenia03_space-other_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-vuiisIngenia04/anat/{sub-vuiisIngenia04_space-other_T1w_label-discs_dlabel.json => sub-vuiisIngenia04_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-vuiisIngenia04/anat/{sub-vuiisIngenia04_space-other_T1w_label-discs_dlabel.nii.gz => sub-vuiisIngenia04_T1w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-vuiisIngenia04/anat/sub-vuiisIngenia04_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-vuiisIngenia04/anat/{sub-vuiisIngenia04_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz => sub-vuiisIngenia04_T2star_label-discs_desc-warp_dlabel.nii.gz} (100%) rename derivatives/labels/sub-vuiisIngenia04/anat/{sub-vuiisIngenia04_space-other_T2w_label-discs_dlabel.json => sub-vuiisIngenia04_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-vuiisIngenia04/anat/{sub-vuiisIngenia04_space-other_T2w_label-discs_dlabel.nii.gz => sub-vuiisIngenia04_T2w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-vuiisIngenia04/anat/sub-vuiisIngenia04_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-vuiisIngenia04/anat/{sub-vuiisIngenia04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-vuiisIngenia04_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-vuiisIngenia04/anat/sub-vuiisIngenia04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-vuiisIngenia04/anat/sub-vuiisIngenia04_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-vuiisIngenia04/anat/{sub-vuiisIngenia04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-vuiisIngenia04_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-vuiisIngenia04/anat/sub-vuiisIngenia04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json delete mode 100644 derivatives/labels/sub-vuiisIngenia04/anat/sub-vuiisIngenia04_space-other_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-vuiisIngenia05/anat/{sub-vuiisIngenia05_space-other_T1w_label-discs_dlabel.json => sub-vuiisIngenia05_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-vuiisIngenia05/anat/{sub-vuiisIngenia05_space-other_T1w_label-discs_dlabel.nii.gz => sub-vuiisIngenia05_T1w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-vuiisIngenia05/anat/sub-vuiisIngenia05_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-vuiisIngenia05/anat/{sub-vuiisIngenia05_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz => sub-vuiisIngenia05_T2star_label-discs_desc-warp_dlabel.nii.gz} (100%) rename derivatives/labels/sub-vuiisIngenia05/anat/{sub-vuiisIngenia05_space-other_T2w_label-discs_dlabel.json => sub-vuiisIngenia05_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-vuiisIngenia05/anat/{sub-vuiisIngenia05_space-other_T2w_label-discs_dlabel.nii.gz => sub-vuiisIngenia05_T2w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-vuiisIngenia05/anat/sub-vuiisIngenia05_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-vuiisIngenia05/anat/{sub-vuiisIngenia05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-vuiisIngenia05_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-vuiisIngenia05/anat/sub-vuiisIngenia05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-vuiisIngenia05/anat/sub-vuiisIngenia05_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-vuiisIngenia05/anat/{sub-vuiisIngenia05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-vuiisIngenia05_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-vuiisIngenia05/anat/sub-vuiisIngenia05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-vuiisIngenia05/anat/sub-vuiisIngenia05_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.json rename derivatives/labels/sub-vuiisIngenia05/anat/{sub-vuiisIngenia05_space-other_T1w_RPI_r_labels-manual.nii.gz => sub-vuiisIngenia05_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-vuiisIngenia05/anat/sub-vuiisIngenia05_space-other_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-vuiisIngenia06/anat/{sub-vuiisIngenia06_space-other_T1w_label-discs_dlabel.json => sub-vuiisIngenia06_T1w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-vuiisIngenia06/anat/{sub-vuiisIngenia06_space-other_T1w_label-discs_dlabel.nii.gz => sub-vuiisIngenia06_T1w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-vuiisIngenia06/anat/sub-vuiisIngenia06_T2star_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-vuiisIngenia06/anat/{sub-vuiisIngenia06_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz => sub-vuiisIngenia06_T2star_label-discs_desc-warp_dlabel.nii.gz} (100%) rename derivatives/labels/sub-vuiisIngenia06/anat/{sub-vuiisIngenia06_space-other_T2w_label-discs_dlabel.json => sub-vuiisIngenia06_T2w_label-discs_dlabel.json} (100%) rename derivatives/labels/sub-vuiisIngenia06/anat/{sub-vuiisIngenia06_space-other_T2w_label-discs_dlabel.nii.gz => sub-vuiisIngenia06_T2w_label-discs_dlabel.nii.gz} (100%) create mode 100644 derivatives/labels/sub-vuiisIngenia06/anat/sub-vuiisIngenia06_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-vuiisIngenia06/anat/{sub-vuiisIngenia06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-vuiisIngenia06_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-vuiisIngenia06/anat/sub-vuiisIngenia06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json create mode 100644 derivatives/labels/sub-vuiisIngenia06/anat/sub-vuiisIngenia06_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json rename derivatives/labels/sub-vuiisIngenia06/anat/{sub-vuiisIngenia06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz => sub-vuiisIngenia06_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz} (100%) delete mode 100644 derivatives/labels/sub-vuiisIngenia06/anat/sub-vuiisIngenia06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json delete mode 100644 derivatives/labels/sub-vuiisIngenia06/anat/sub-vuiisIngenia06_space-other_T2star_label-discs_desc-warp_dlabel.json diff --git a/derivatives/labels/sub-amu01/anat/sub-amu01_space-other_T1w_label-discs_dlabel.json b/derivatives/labels/sub-amu01/anat/sub-amu01_T1w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-amu01/anat/sub-amu01_space-other_T1w_label-discs_dlabel.json rename to derivatives/labels/sub-amu01/anat/sub-amu01_T1w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-amu01/anat/sub-amu01_space-other_T1w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-amu01/anat/sub-amu01_T1w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-amu01/anat/sub-amu01_space-other_T1w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-amu01/anat/sub-amu01_T1w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-amu01/anat/sub-amu01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-amu01/anat/sub-amu01_T2star_label-discs_desc-warp_dlabel.json similarity index 75% rename from derivatives/labels/sub-amu01/anat/sub-amu01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json rename to derivatives/labels/sub-amu01/anat/sub-amu01_T2star_label-discs_desc-warp_dlabel.json index d17e7a9167..26b4328e81 100644 --- a/derivatives/labels/sub-amu01/anat/sub-amu01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json +++ b/derivatives/labels/sub-amu01/anat/sub-amu01_T2star_label-discs_desc-warp_dlabel.json @@ -1,7 +1,4 @@ { - "SpatialReference": { - "Orientation": "RPI" - }, "GeneratedBy": [ { "Name": "sct_register_multimodal", diff --git a/derivatives/labels/sub-amu01/anat/sub-amu01_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-amu01/anat/sub-amu01_T2star_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-amu01/anat/sub-amu01_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-amu01/anat/sub-amu01_T2star_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-amu01/anat/sub-amu01_space-other_T2w_label-discs_dlabel.json b/derivatives/labels/sub-amu01/anat/sub-amu01_T2w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-amu01/anat/sub-amu01_space-other_T2w_label-discs_dlabel.json rename to derivatives/labels/sub-amu01/anat/sub-amu01_T2w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-amu01/anat/sub-amu01_space-other_T2w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-amu01/anat/sub-amu01_T2w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-amu01/anat/sub-amu01_space-other_T2w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-amu01/anat/sub-amu01_T2w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-amu01/anat/sub-amu01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-amu01/anat/sub-amu01_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json similarity index 75% rename from derivatives/labels/sub-amu01/anat/sub-amu01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json rename to derivatives/labels/sub-amu01/anat/sub-amu01_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json index d17e7a9167..26b4328e81 100644 --- a/derivatives/labels/sub-amu01/anat/sub-amu01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json +++ b/derivatives/labels/sub-amu01/anat/sub-amu01_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json @@ -1,7 +1,4 @@ { - "SpatialReference": { - "Orientation": "RPI" - }, "GeneratedBy": [ { "Name": "sct_register_multimodal", diff --git a/derivatives/labels/sub-amu01/anat/sub-amu01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-amu01/anat/sub-amu01_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-amu01/anat/sub-amu01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-amu01/anat/sub-amu01_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-amu01/anat/sub-amu01_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-amu01/anat/sub-amu01_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json similarity index 75% rename from derivatives/labels/sub-amu01/anat/sub-amu01_space-other_T2star_label-discs_desc-warp_dlabel.json rename to derivatives/labels/sub-amu01/anat/sub-amu01_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json index d17e7a9167..26b4328e81 100644 --- a/derivatives/labels/sub-amu01/anat/sub-amu01_space-other_T2star_label-discs_desc-warp_dlabel.json +++ b/derivatives/labels/sub-amu01/anat/sub-amu01_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json @@ -1,7 +1,4 @@ { - "SpatialReference": { - "Orientation": "RPI" - }, "GeneratedBy": [ { "Name": "sct_register_multimodal", diff --git a/derivatives/labels/sub-amu01/anat/sub-amu01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-amu01/anat/sub-amu01_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-amu01/anat/sub-amu01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-amu01/anat/sub-amu01_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-amu01/anat/sub-amu01_space-other_T2star_label-SC_seg.nii.gz b/derivatives/labels/sub-amu01/anat/sub-amu01_space-other_T2star_label-SC_seg.nii.gz index aa80d3560a..322f623a92 100644 --- a/derivatives/labels/sub-amu01/anat/sub-amu01_space-other_T2star_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-amu01/anat/sub-amu01_space-other_T2star_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s15022--2977a278042efb20a54da47a9113419e36a77a0abfeded3ccd91a6a9c83c9714.nii.gz +/annex/objects/SHA256E-s15043--a1de7e3b8d4534261efd9d819f57d40108a0095c721af4ba73642f497d56fbe1.nii.gz diff --git a/derivatives/labels/sub-amu02/anat/sub-amu02_space-other_T1w_label-discs_dlabel.json b/derivatives/labels/sub-amu02/anat/sub-amu02_T1w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-amu02/anat/sub-amu02_space-other_T1w_label-discs_dlabel.json rename to derivatives/labels/sub-amu02/anat/sub-amu02_T1w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-amu02/anat/sub-amu02_space-other_T1w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-amu02/anat/sub-amu02_T1w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-amu02/anat/sub-amu02_space-other_T1w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-amu02/anat/sub-amu02_T1w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-amu02/anat/sub-amu02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-amu02/anat/sub-amu02_T2star_label-discs_desc-warp_dlabel.json similarity index 75% rename from derivatives/labels/sub-amu02/anat/sub-amu02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json rename to derivatives/labels/sub-amu02/anat/sub-amu02_T2star_label-discs_desc-warp_dlabel.json index d17e7a9167..26b4328e81 100644 --- a/derivatives/labels/sub-amu02/anat/sub-amu02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json +++ b/derivatives/labels/sub-amu02/anat/sub-amu02_T2star_label-discs_desc-warp_dlabel.json @@ -1,7 +1,4 @@ { - "SpatialReference": { - "Orientation": "RPI" - }, "GeneratedBy": [ { "Name": "sct_register_multimodal", diff --git a/derivatives/labels/sub-amu02/anat/sub-amu02_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-amu02/anat/sub-amu02_T2star_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-amu02/anat/sub-amu02_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-amu02/anat/sub-amu02_T2star_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-amu02/anat/sub-amu02_space-other_T2w_label-discs_dlabel.json b/derivatives/labels/sub-amu02/anat/sub-amu02_T2w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-amu02/anat/sub-amu02_space-other_T2w_label-discs_dlabel.json rename to derivatives/labels/sub-amu02/anat/sub-amu02_T2w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-amu02/anat/sub-amu02_space-other_T2w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-amu02/anat/sub-amu02_T2w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-amu02/anat/sub-amu02_space-other_T2w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-amu02/anat/sub-amu02_T2w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-amu02/anat/sub-amu02_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-amu02/anat/sub-amu02_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-amu02/anat/sub-amu02_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-amu02/anat/sub-amu02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-amu02/anat/sub-amu02_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-amu02/anat/sub-amu02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-amu02/anat/sub-amu02_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-amu02/anat/sub-amu02_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-amu02/anat/sub-amu02_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-amu02/anat/sub-amu02_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-amu02/anat/sub-amu02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-amu02/anat/sub-amu02_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-amu02/anat/sub-amu02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-amu02/anat/sub-amu02_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-amu02/anat/sub-amu02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-amu02/anat/sub-amu02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-amu02/anat/sub-amu02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-amu02/anat/sub-amu02_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.json b/derivatives/labels/sub-amu02/anat/sub-amu02_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.json new file mode 100644 index 0000000000..e537a137e5 --- /dev/null +++ b/derivatives/labels/sub-amu02/anat/sub-amu02_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.json @@ -0,0 +1,11 @@ +{ + "SpatialReference": { + "Orientation": "RPI", + "Resampling": "1x1x1" + }, + "GeneratedBy": [ + { + "Description": "Manual label of C2 and C5 mid-vertebrae, at the center of the spinal cord." + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-amu02/anat/sub-amu02_space-other_T1w_RPI_r_labels-manual.nii.gz b/derivatives/labels/sub-amu02/anat/sub-amu02_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-amu02/anat/sub-amu02_space-other_T1w_RPI_r_labels-manual.nii.gz rename to derivatives/labels/sub-amu02/anat/sub-amu02_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.nii.gz diff --git a/derivatives/labels/sub-amu02/anat/sub-amu02_space-other_T2star_label-SC_seg.nii.gz b/derivatives/labels/sub-amu02/anat/sub-amu02_space-other_T2star_label-SC_seg.nii.gz index e5eb187c32..547d259425 100644 --- a/derivatives/labels/sub-amu02/anat/sub-amu02_space-other_T2star_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-amu02/anat/sub-amu02_space-other_T2star_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s14940--e35f96ff4d53a47367500d65f52e21de520aba63e4ec98321e6228b3b9a4c6c8.nii.gz +/annex/objects/SHA256E-s14960--896f6311648cff45d847a4aae81079ae5a62f3afe01aa49215d73f1118fa83d0.nii.gz diff --git a/derivatives/labels/sub-amu02/anat/sub-amu02_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-amu02/anat/sub-amu02_space-other_T2star_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-amu02/anat/sub-amu02_space-other_T2star_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-amu03/anat/sub-amu03_space-other_T1w_label-discs_dlabel.json b/derivatives/labels/sub-amu03/anat/sub-amu03_T1w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-amu03/anat/sub-amu03_space-other_T1w_label-discs_dlabel.json rename to derivatives/labels/sub-amu03/anat/sub-amu03_T1w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-amu03/anat/sub-amu03_space-other_T1w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-amu03/anat/sub-amu03_T1w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-amu03/anat/sub-amu03_space-other_T1w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-amu03/anat/sub-amu03_T1w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-amu03/anat/sub-amu03_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-amu03/anat/sub-amu03_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-amu03/anat/sub-amu03_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-amu03/anat/sub-amu03_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-amu03/anat/sub-amu03_T2star_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-amu03/anat/sub-amu03_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-amu03/anat/sub-amu03_T2star_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-amu03/anat/sub-amu03_space-other_T2w_label-discs_dlabel.json b/derivatives/labels/sub-amu03/anat/sub-amu03_T2w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-amu03/anat/sub-amu03_space-other_T2w_label-discs_dlabel.json rename to derivatives/labels/sub-amu03/anat/sub-amu03_T2w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-amu03/anat/sub-amu03_space-other_T2w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-amu03/anat/sub-amu03_T2w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-amu03/anat/sub-amu03_space-other_T2w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-amu03/anat/sub-amu03_T2w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-amu03/anat/sub-amu03_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-amu03/anat/sub-amu03_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-amu03/anat/sub-amu03_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-amu03/anat/sub-amu03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-amu03/anat/sub-amu03_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-amu03/anat/sub-amu03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-amu03/anat/sub-amu03_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-amu03/anat/sub-amu03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-amu03/anat/sub-amu03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-amu03/anat/sub-amu03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-amu03/anat/sub-amu03_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-amu03/anat/sub-amu03_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-amu03/anat/sub-amu03_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-amu03/anat/sub-amu03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-amu03/anat/sub-amu03_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-amu03/anat/sub-amu03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-amu03/anat/sub-amu03_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-amu03/anat/sub-amu03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-amu03/anat/sub-amu03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-amu03/anat/sub-amu03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-amu03/anat/sub-amu03_space-other_T2star_label-SC_seg.nii.gz b/derivatives/labels/sub-amu03/anat/sub-amu03_space-other_T2star_label-SC_seg.nii.gz index 0b7523f152..2cf220cf2f 100644 --- a/derivatives/labels/sub-amu03/anat/sub-amu03_space-other_T2star_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-amu03/anat/sub-amu03_space-other_T2star_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s6837--1858676a4885165e13f80fa0c357ffaaff9aab4507036e6043d58f0a370834f9.nii.gz +/annex/objects/SHA256E-s28285--674ecabde3a7fbe0d7e8701a27756ff1481153464936f6373bc9bd7aee602ad1.nii.gz diff --git a/derivatives/labels/sub-amu03/anat/sub-amu03_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-amu03/anat/sub-amu03_space-other_T2star_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-amu03/anat/sub-amu03_space-other_T2star_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-amu04/anat/sub-amu04_space-other_T1w_label-discs_dlabel.json b/derivatives/labels/sub-amu04/anat/sub-amu04_T1w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-amu04/anat/sub-amu04_space-other_T1w_label-discs_dlabel.json rename to derivatives/labels/sub-amu04/anat/sub-amu04_T1w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-amu04/anat/sub-amu04_space-other_T1w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-amu04/anat/sub-amu04_T1w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-amu04/anat/sub-amu04_space-other_T1w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-amu04/anat/sub-amu04_T1w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-amu04/anat/sub-amu04_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-amu04/anat/sub-amu04_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-amu04/anat/sub-amu04_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-amu04/anat/sub-amu04_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-amu04/anat/sub-amu04_T2star_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-amu04/anat/sub-amu04_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-amu04/anat/sub-amu04_T2star_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-amu04/anat/sub-amu04_space-other_T2w_label-discs_dlabel.json b/derivatives/labels/sub-amu04/anat/sub-amu04_T2w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-amu04/anat/sub-amu04_space-other_T2w_label-discs_dlabel.json rename to derivatives/labels/sub-amu04/anat/sub-amu04_T2w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-amu04/anat/sub-amu04_space-other_T2w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-amu04/anat/sub-amu04_T2w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-amu04/anat/sub-amu04_space-other_T2w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-amu04/anat/sub-amu04_T2w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-amu04/anat/sub-amu04_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-amu04/anat/sub-amu04_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-amu04/anat/sub-amu04_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-amu04/anat/sub-amu04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-amu04/anat/sub-amu04_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-amu04/anat/sub-amu04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-amu04/anat/sub-amu04_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-amu04/anat/sub-amu04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-amu04/anat/sub-amu04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-amu04/anat/sub-amu04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-amu04/anat/sub-amu04_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-amu04/anat/sub-amu04_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-amu04/anat/sub-amu04_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-amu04/anat/sub-amu04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-amu04/anat/sub-amu04_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-amu04/anat/sub-amu04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-amu04/anat/sub-amu04_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-amu04/anat/sub-amu04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-amu04/anat/sub-amu04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-amu04/anat/sub-amu04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-amu04/anat/sub-amu04_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.json b/derivatives/labels/sub-amu04/anat/sub-amu04_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.json new file mode 100644 index 0000000000..e537a137e5 --- /dev/null +++ b/derivatives/labels/sub-amu04/anat/sub-amu04_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.json @@ -0,0 +1,11 @@ +{ + "SpatialReference": { + "Orientation": "RPI", + "Resampling": "1x1x1" + }, + "GeneratedBy": [ + { + "Description": "Manual label of C2 and C5 mid-vertebrae, at the center of the spinal cord." + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-amu04/anat/sub-amu04_space-other_T1w_RPI_r_labels-manual.nii.gz b/derivatives/labels/sub-amu04/anat/sub-amu04_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-amu04/anat/sub-amu04_space-other_T1w_RPI_r_labels-manual.nii.gz rename to derivatives/labels/sub-amu04/anat/sub-amu04_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.nii.gz diff --git a/derivatives/labels/sub-amu04/anat/sub-amu04_space-other_T2star_label-SC_seg.nii.gz b/derivatives/labels/sub-amu04/anat/sub-amu04_space-other_T2star_label-SC_seg.nii.gz index 5d4cb97a63..b66f9f69c2 100644 --- a/derivatives/labels/sub-amu04/anat/sub-amu04_space-other_T2star_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-amu04/anat/sub-amu04_space-other_T2star_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s14734--8fca5f16738cfe34cdad49b91922d81d3aa40ad474c21bebf0fe6fbac3c444c1.nii.gz +/annex/objects/SHA256E-s14755--de97e3a830c2e9c1a24ccbd87c2c424a5c174e8367b10508e290aa72ef4c14fa.nii.gz diff --git a/derivatives/labels/sub-amu04/anat/sub-amu04_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-amu04/anat/sub-amu04_space-other_T2star_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-amu04/anat/sub-amu04_space-other_T2star_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-amu05/anat/sub-amu05_space-other_T1w_label-discs_dlabel.json b/derivatives/labels/sub-amu05/anat/sub-amu05_T1w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-amu05/anat/sub-amu05_space-other_T1w_label-discs_dlabel.json rename to derivatives/labels/sub-amu05/anat/sub-amu05_T1w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-amu05/anat/sub-amu05_space-other_T1w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-amu05/anat/sub-amu05_T1w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-amu05/anat/sub-amu05_space-other_T1w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-amu05/anat/sub-amu05_T1w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-amu05/anat/sub-amu05_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-amu05/anat/sub-amu05_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-amu05/anat/sub-amu05_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-amu05/anat/sub-amu05_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-amu05/anat/sub-amu05_T2star_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-amu05/anat/sub-amu05_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-amu05/anat/sub-amu05_T2star_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-amu05/anat/sub-amu05_space-other_T2w_label-discs_dlabel.json b/derivatives/labels/sub-amu05/anat/sub-amu05_T2w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-amu05/anat/sub-amu05_space-other_T2w_label-discs_dlabel.json rename to derivatives/labels/sub-amu05/anat/sub-amu05_T2w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-amu05/anat/sub-amu05_space-other_T2w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-amu05/anat/sub-amu05_T2w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-amu05/anat/sub-amu05_space-other_T2w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-amu05/anat/sub-amu05_T2w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-amu05/anat/sub-amu05_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-amu05/anat/sub-amu05_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-amu05/anat/sub-amu05_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-amu05/anat/sub-amu05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-amu05/anat/sub-amu05_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-amu05/anat/sub-amu05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-amu05/anat/sub-amu05_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-amu05/anat/sub-amu05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-amu05/anat/sub-amu05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-amu05/anat/sub-amu05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-amu05/anat/sub-amu05_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-amu05/anat/sub-amu05_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-amu05/anat/sub-amu05_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-amu05/anat/sub-amu05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-amu05/anat/sub-amu05_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-amu05/anat/sub-amu05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-amu05/anat/sub-amu05_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-amu05/anat/sub-amu05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-amu05/anat/sub-amu05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-amu05/anat/sub-amu05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-amu05/anat/sub-amu05_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.json b/derivatives/labels/sub-amu05/anat/sub-amu05_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.json new file mode 100644 index 0000000000..e537a137e5 --- /dev/null +++ b/derivatives/labels/sub-amu05/anat/sub-amu05_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.json @@ -0,0 +1,11 @@ +{ + "SpatialReference": { + "Orientation": "RPI", + "Resampling": "1x1x1" + }, + "GeneratedBy": [ + { + "Description": "Manual label of C2 and C5 mid-vertebrae, at the center of the spinal cord." + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-amu05/anat/sub-amu05_space-other_T1w_RPI_r_labels-manual.nii.gz b/derivatives/labels/sub-amu05/anat/sub-amu05_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-amu05/anat/sub-amu05_space-other_T1w_RPI_r_labels-manual.nii.gz rename to derivatives/labels/sub-amu05/anat/sub-amu05_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.nii.gz diff --git a/derivatives/labels/sub-amu05/anat/sub-amu05_space-other_T2star_label-SC_seg.nii.gz b/derivatives/labels/sub-amu05/anat/sub-amu05_space-other_T2star_label-SC_seg.nii.gz index 24e3095bb4..b171c4b95a 100644 --- a/derivatives/labels/sub-amu05/anat/sub-amu05_space-other_T2star_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-amu05/anat/sub-amu05_space-other_T2star_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s14938--b2c3f7ebd1a0707796f8d8b7b0939a17d23c9b3638927bd8af5662cc2b94f388.nii.gz +/annex/objects/SHA256E-s14959--6dfc9a8e300c9274ec51c645c69e3eb3799b0746fa7ddf7962099790d6e522d4.nii.gz diff --git a/derivatives/labels/sub-amu05/anat/sub-amu05_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-amu05/anat/sub-amu05_space-other_T2star_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-amu05/anat/sub-amu05_space-other_T2star_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-balgrist01/anat/sub-balgrist01_space-other_T1w_label-discs_dlabel.json b/derivatives/labels/sub-balgrist01/anat/sub-balgrist01_T1w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-balgrist01/anat/sub-balgrist01_space-other_T1w_label-discs_dlabel.json rename to derivatives/labels/sub-balgrist01/anat/sub-balgrist01_T1w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-balgrist01/anat/sub-balgrist01_space-other_T1w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-balgrist01/anat/sub-balgrist01_T1w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-balgrist01/anat/sub-balgrist01_space-other_T1w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-balgrist01/anat/sub-balgrist01_T1w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-balgrist01/anat/sub-balgrist01_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-balgrist01/anat/sub-balgrist01_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-balgrist01/anat/sub-balgrist01_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-balgrist01/anat/sub-balgrist01_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-balgrist01/anat/sub-balgrist01_T2star_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-balgrist01/anat/sub-balgrist01_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-balgrist01/anat/sub-balgrist01_T2star_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-balgrist01/anat/sub-balgrist01_space-other_T2w_label-discs_dlabel.json b/derivatives/labels/sub-balgrist01/anat/sub-balgrist01_T2w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-balgrist01/anat/sub-balgrist01_space-other_T2w_label-discs_dlabel.json rename to derivatives/labels/sub-balgrist01/anat/sub-balgrist01_T2w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-balgrist01/anat/sub-balgrist01_space-other_T2w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-balgrist01/anat/sub-balgrist01_T2w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-balgrist01/anat/sub-balgrist01_space-other_T2w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-balgrist01/anat/sub-balgrist01_T2w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-balgrist01/anat/sub-balgrist01_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-balgrist01/anat/sub-balgrist01_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-balgrist01/anat/sub-balgrist01_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-balgrist01/anat/sub-balgrist01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-balgrist01/anat/sub-balgrist01_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-balgrist01/anat/sub-balgrist01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-balgrist01/anat/sub-balgrist01_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-balgrist01/anat/sub-balgrist01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-balgrist01/anat/sub-balgrist01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-balgrist01/anat/sub-balgrist01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-balgrist01/anat/sub-balgrist01_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-balgrist01/anat/sub-balgrist01_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-balgrist01/anat/sub-balgrist01_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-balgrist01/anat/sub-balgrist01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-balgrist01/anat/sub-balgrist01_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-balgrist01/anat/sub-balgrist01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-balgrist01/anat/sub-balgrist01_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-balgrist01/anat/sub-balgrist01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-balgrist01/anat/sub-balgrist01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-balgrist01/anat/sub-balgrist01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-balgrist01/anat/sub-balgrist01_space-other_T2star_label-SC_seg.nii.gz b/derivatives/labels/sub-balgrist01/anat/sub-balgrist01_space-other_T2star_label-SC_seg.nii.gz index f5a0bd1a36..999373a68a 100644 --- a/derivatives/labels/sub-balgrist01/anat/sub-balgrist01_space-other_T2star_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-balgrist01/anat/sub-balgrist01_space-other_T2star_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s14860--a4da02a58b596a3eb46e6de23243694d2694b01ba1c368c73ccf4941ff24caae.nii.gz +/annex/objects/SHA256E-s14881--f349ecd00adc0965216e3a7d39fc0fa6fb0228a75cbc79d4efc3dfebea0d71ab.nii.gz diff --git a/derivatives/labels/sub-balgrist01/anat/sub-balgrist01_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-balgrist01/anat/sub-balgrist01_space-other_T2star_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-balgrist01/anat/sub-balgrist01_space-other_T2star_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-balgrist02/anat/sub-balgrist02_space-other_T1w_label-discs_dlabel.json b/derivatives/labels/sub-balgrist02/anat/sub-balgrist02_T1w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-balgrist02/anat/sub-balgrist02_space-other_T1w_label-discs_dlabel.json rename to derivatives/labels/sub-balgrist02/anat/sub-balgrist02_T1w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-balgrist02/anat/sub-balgrist02_space-other_T1w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-balgrist02/anat/sub-balgrist02_T1w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-balgrist02/anat/sub-balgrist02_space-other_T1w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-balgrist02/anat/sub-balgrist02_T1w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-balgrist02/anat/sub-balgrist02_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-balgrist02/anat/sub-balgrist02_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-balgrist02/anat/sub-balgrist02_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-balgrist02/anat/sub-balgrist02_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-balgrist02/anat/sub-balgrist02_T2star_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-balgrist02/anat/sub-balgrist02_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-balgrist02/anat/sub-balgrist02_T2star_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-balgrist02/anat/sub-balgrist02_space-other_T2w_label-discs_dlabel.json b/derivatives/labels/sub-balgrist02/anat/sub-balgrist02_T2w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-balgrist02/anat/sub-balgrist02_space-other_T2w_label-discs_dlabel.json rename to derivatives/labels/sub-balgrist02/anat/sub-balgrist02_T2w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-balgrist02/anat/sub-balgrist02_space-other_T2w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-balgrist02/anat/sub-balgrist02_T2w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-balgrist02/anat/sub-balgrist02_space-other_T2w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-balgrist02/anat/sub-balgrist02_T2w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-balgrist02/anat/sub-balgrist02_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-balgrist02/anat/sub-balgrist02_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-balgrist02/anat/sub-balgrist02_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-balgrist02/anat/sub-balgrist02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-balgrist02/anat/sub-balgrist02_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-balgrist02/anat/sub-balgrist02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-balgrist02/anat/sub-balgrist02_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-balgrist02/anat/sub-balgrist02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-balgrist02/anat/sub-balgrist02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-balgrist02/anat/sub-balgrist02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-balgrist02/anat/sub-balgrist02_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-balgrist02/anat/sub-balgrist02_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-balgrist02/anat/sub-balgrist02_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-balgrist02/anat/sub-balgrist02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-balgrist02/anat/sub-balgrist02_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-balgrist02/anat/sub-balgrist02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-balgrist02/anat/sub-balgrist02_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-balgrist02/anat/sub-balgrist02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-balgrist02/anat/sub-balgrist02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-balgrist02/anat/sub-balgrist02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-balgrist02/anat/sub-balgrist02_space-other_T2star_label-SC_seg.nii.gz b/derivatives/labels/sub-balgrist02/anat/sub-balgrist02_space-other_T2star_label-SC_seg.nii.gz index e42201703d..f8d83c8b41 100644 --- a/derivatives/labels/sub-balgrist02/anat/sub-balgrist02_space-other_T2star_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-balgrist02/anat/sub-balgrist02_space-other_T2star_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s14889--61e36fc3b47da9627455948bfacc044382e45bea1d7aa4ee4540c40a38cce8f1.nii.gz +/annex/objects/SHA256E-s14911--b7064c9420b7ce52de03f1e7d8a91808c29750eb2ae02c026ef16f7c8f55bf11.nii.gz diff --git a/derivatives/labels/sub-balgrist02/anat/sub-balgrist02_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-balgrist02/anat/sub-balgrist02_space-other_T2star_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-balgrist02/anat/sub-balgrist02_space-other_T2star_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-balgrist03/anat/sub-balgrist03_space-other_T1w_label-discs_dlabel.json b/derivatives/labels/sub-balgrist03/anat/sub-balgrist03_T1w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-balgrist03/anat/sub-balgrist03_space-other_T1w_label-discs_dlabel.json rename to derivatives/labels/sub-balgrist03/anat/sub-balgrist03_T1w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-balgrist03/anat/sub-balgrist03_space-other_T1w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-balgrist03/anat/sub-balgrist03_T1w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-balgrist03/anat/sub-balgrist03_space-other_T1w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-balgrist03/anat/sub-balgrist03_T1w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-balgrist03/anat/sub-balgrist03_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-balgrist03/anat/sub-balgrist03_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-balgrist03/anat/sub-balgrist03_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-balgrist03/anat/sub-balgrist03_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-balgrist03/anat/sub-balgrist03_T2star_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-balgrist03/anat/sub-balgrist03_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-balgrist03/anat/sub-balgrist03_T2star_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-balgrist03/anat/sub-balgrist03_space-other_T2w_label-discs_dlabel.json b/derivatives/labels/sub-balgrist03/anat/sub-balgrist03_T2w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-balgrist03/anat/sub-balgrist03_space-other_T2w_label-discs_dlabel.json rename to derivatives/labels/sub-balgrist03/anat/sub-balgrist03_T2w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-balgrist03/anat/sub-balgrist03_space-other_T2w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-balgrist03/anat/sub-balgrist03_T2w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-balgrist03/anat/sub-balgrist03_space-other_T2w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-balgrist03/anat/sub-balgrist03_T2w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-balgrist03/anat/sub-balgrist03_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-balgrist03/anat/sub-balgrist03_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-balgrist03/anat/sub-balgrist03_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-balgrist03/anat/sub-balgrist03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-balgrist03/anat/sub-balgrist03_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-balgrist03/anat/sub-balgrist03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-balgrist03/anat/sub-balgrist03_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-balgrist03/anat/sub-balgrist03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-balgrist03/anat/sub-balgrist03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-balgrist03/anat/sub-balgrist03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-balgrist03/anat/sub-balgrist03_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-balgrist03/anat/sub-balgrist03_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-balgrist03/anat/sub-balgrist03_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-balgrist03/anat/sub-balgrist03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-balgrist03/anat/sub-balgrist03_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-balgrist03/anat/sub-balgrist03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-balgrist03/anat/sub-balgrist03_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-balgrist03/anat/sub-balgrist03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-balgrist03/anat/sub-balgrist03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-balgrist03/anat/sub-balgrist03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-balgrist03/anat/sub-balgrist03_space-other_T2star_label-SC_seg.nii.gz b/derivatives/labels/sub-balgrist03/anat/sub-balgrist03_space-other_T2star_label-SC_seg.nii.gz index 0d06f8c75e..6a5664c367 100644 --- a/derivatives/labels/sub-balgrist03/anat/sub-balgrist03_space-other_T2star_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-balgrist03/anat/sub-balgrist03_space-other_T2star_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s6727--31a168125639df23d5c9bd7bef9c32d9a1927c94d0d35a07b6c6bec060350f67.nii.gz +/annex/objects/SHA256E-s28209--3a78b63f1d4a4f5815a7d5d2e777a01b9f9fa86c27ae9abca2d6bd6f02c8054b.nii.gz diff --git a/derivatives/labels/sub-balgrist03/anat/sub-balgrist03_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-balgrist03/anat/sub-balgrist03_space-other_T2star_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-balgrist03/anat/sub-balgrist03_space-other_T2star_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-balgrist04/anat/sub-balgrist04_space-other_T1w_label-discs_dlabel.json b/derivatives/labels/sub-balgrist04/anat/sub-balgrist04_T1w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-balgrist04/anat/sub-balgrist04_space-other_T1w_label-discs_dlabel.json rename to derivatives/labels/sub-balgrist04/anat/sub-balgrist04_T1w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-balgrist04/anat/sub-balgrist04_space-other_T1w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-balgrist04/anat/sub-balgrist04_T1w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-balgrist04/anat/sub-balgrist04_space-other_T1w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-balgrist04/anat/sub-balgrist04_T1w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-balgrist04/anat/sub-balgrist04_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-balgrist04/anat/sub-balgrist04_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-balgrist04/anat/sub-balgrist04_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-balgrist04/anat/sub-balgrist04_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-balgrist04/anat/sub-balgrist04_T2star_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-balgrist04/anat/sub-balgrist04_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-balgrist04/anat/sub-balgrist04_T2star_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-balgrist04/anat/sub-balgrist04_space-other_T2w_label-discs_dlabel.json b/derivatives/labels/sub-balgrist04/anat/sub-balgrist04_T2w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-balgrist04/anat/sub-balgrist04_space-other_T2w_label-discs_dlabel.json rename to derivatives/labels/sub-balgrist04/anat/sub-balgrist04_T2w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-balgrist04/anat/sub-balgrist04_space-other_T2w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-balgrist04/anat/sub-balgrist04_T2w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-balgrist04/anat/sub-balgrist04_space-other_T2w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-balgrist04/anat/sub-balgrist04_T2w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-balgrist04/anat/sub-balgrist04_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-balgrist04/anat/sub-balgrist04_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-balgrist04/anat/sub-balgrist04_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-balgrist04/anat/sub-balgrist04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-balgrist04/anat/sub-balgrist04_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-balgrist04/anat/sub-balgrist04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-balgrist04/anat/sub-balgrist04_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-balgrist04/anat/sub-balgrist04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-balgrist04/anat/sub-balgrist04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-balgrist04/anat/sub-balgrist04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-balgrist04/anat/sub-balgrist04_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-balgrist04/anat/sub-balgrist04_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-balgrist04/anat/sub-balgrist04_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-balgrist04/anat/sub-balgrist04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-balgrist04/anat/sub-balgrist04_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-balgrist04/anat/sub-balgrist04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-balgrist04/anat/sub-balgrist04_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-balgrist04/anat/sub-balgrist04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-balgrist04/anat/sub-balgrist04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-balgrist04/anat/sub-balgrist04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-balgrist04/anat/sub-balgrist04_space-other_T2star_label-SC_seg.nii.gz b/derivatives/labels/sub-balgrist04/anat/sub-balgrist04_space-other_T2star_label-SC_seg.nii.gz index 50448e4fa2..c313dbdf33 100644 --- a/derivatives/labels/sub-balgrist04/anat/sub-balgrist04_space-other_T2star_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-balgrist04/anat/sub-balgrist04_space-other_T2star_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s14840--8e52828f9c4477140e93e3c029a51d8f17c660cedd50ebca21965ae950ff41dc.nii.gz +/annex/objects/SHA256E-s14861--b6e1e0332c3478fc8d0dc26f6e4de2956cdb6d8b646b62873a853c3c0070ae70.nii.gz diff --git a/derivatives/labels/sub-balgrist04/anat/sub-balgrist04_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-balgrist04/anat/sub-balgrist04_space-other_T2star_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-balgrist04/anat/sub-balgrist04_space-other_T2star_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-balgrist05/anat/sub-balgrist05_space-other_T1w_label-discs_dlabel.json b/derivatives/labels/sub-balgrist05/anat/sub-balgrist05_T1w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-balgrist05/anat/sub-balgrist05_space-other_T1w_label-discs_dlabel.json rename to derivatives/labels/sub-balgrist05/anat/sub-balgrist05_T1w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-balgrist05/anat/sub-balgrist05_space-other_T1w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-balgrist05/anat/sub-balgrist05_T1w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-balgrist05/anat/sub-balgrist05_space-other_T1w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-balgrist05/anat/sub-balgrist05_T1w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-balgrist05/anat/sub-balgrist05_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-balgrist05/anat/sub-balgrist05_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-balgrist05/anat/sub-balgrist05_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-balgrist05/anat/sub-balgrist05_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-balgrist05/anat/sub-balgrist05_T2star_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-balgrist05/anat/sub-balgrist05_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-balgrist05/anat/sub-balgrist05_T2star_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-balgrist05/anat/sub-balgrist05_space-other_T2w_label-discs_dlabel.json b/derivatives/labels/sub-balgrist05/anat/sub-balgrist05_T2w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-balgrist05/anat/sub-balgrist05_space-other_T2w_label-discs_dlabel.json rename to derivatives/labels/sub-balgrist05/anat/sub-balgrist05_T2w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-balgrist05/anat/sub-balgrist05_space-other_T2w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-balgrist05/anat/sub-balgrist05_T2w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-balgrist05/anat/sub-balgrist05_space-other_T2w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-balgrist05/anat/sub-balgrist05_T2w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-balgrist05/anat/sub-balgrist05_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-balgrist05/anat/sub-balgrist05_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-balgrist05/anat/sub-balgrist05_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-balgrist05/anat/sub-balgrist05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-balgrist05/anat/sub-balgrist05_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-balgrist05/anat/sub-balgrist05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-balgrist05/anat/sub-balgrist05_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-balgrist05/anat/sub-balgrist05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-balgrist05/anat/sub-balgrist05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-balgrist05/anat/sub-balgrist05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-balgrist05/anat/sub-balgrist05_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-balgrist05/anat/sub-balgrist05_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-balgrist05/anat/sub-balgrist05_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-balgrist05/anat/sub-balgrist05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-balgrist05/anat/sub-balgrist05_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-balgrist05/anat/sub-balgrist05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-balgrist05/anat/sub-balgrist05_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-balgrist05/anat/sub-balgrist05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-balgrist05/anat/sub-balgrist05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-balgrist05/anat/sub-balgrist05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-balgrist05/anat/sub-balgrist05_space-other_T2star_label-SC_seg.nii.gz b/derivatives/labels/sub-balgrist05/anat/sub-balgrist05_space-other_T2star_label-SC_seg.nii.gz index 9046af50a6..0e25e3c762 100644 --- a/derivatives/labels/sub-balgrist05/anat/sub-balgrist05_space-other_T2star_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-balgrist05/anat/sub-balgrist05_space-other_T2star_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s14824--8fa18dc3998a38c968172fe6df586b8f1417d12dfc2b00b433c8a69f0a673851.nii.gz +/annex/objects/SHA256E-s14845--9a79858cb4e1d726795fcf1ab6948dfa9681487b861ca20fe0ef1ccd02c30ceb.nii.gz diff --git a/derivatives/labels/sub-balgrist05/anat/sub-balgrist05_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-balgrist05/anat/sub-balgrist05_space-other_T2star_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-balgrist05/anat/sub-balgrist05_space-other_T2star_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-balgrist06/anat/sub-balgrist06_space-other_T1w_label-discs_dlabel.json b/derivatives/labels/sub-balgrist06/anat/sub-balgrist06_T1w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-balgrist06/anat/sub-balgrist06_space-other_T1w_label-discs_dlabel.json rename to derivatives/labels/sub-balgrist06/anat/sub-balgrist06_T1w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-balgrist06/anat/sub-balgrist06_space-other_T1w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-balgrist06/anat/sub-balgrist06_T1w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-balgrist06/anat/sub-balgrist06_space-other_T1w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-balgrist06/anat/sub-balgrist06_T1w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-balgrist06/anat/sub-balgrist06_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-balgrist06/anat/sub-balgrist06_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-balgrist06/anat/sub-balgrist06_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-balgrist06/anat/sub-balgrist06_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-balgrist06/anat/sub-balgrist06_T2star_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-balgrist06/anat/sub-balgrist06_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-balgrist06/anat/sub-balgrist06_T2star_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-balgrist06/anat/sub-balgrist06_space-other_T2w_label-discs_dlabel.json b/derivatives/labels/sub-balgrist06/anat/sub-balgrist06_T2w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-balgrist06/anat/sub-balgrist06_space-other_T2w_label-discs_dlabel.json rename to derivatives/labels/sub-balgrist06/anat/sub-balgrist06_T2w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-balgrist06/anat/sub-balgrist06_space-other_T2w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-balgrist06/anat/sub-balgrist06_T2w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-balgrist06/anat/sub-balgrist06_space-other_T2w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-balgrist06/anat/sub-balgrist06_T2w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-balgrist06/anat/sub-balgrist06_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-balgrist06/anat/sub-balgrist06_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-balgrist06/anat/sub-balgrist06_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-balgrist06/anat/sub-balgrist06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-balgrist06/anat/sub-balgrist06_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-balgrist06/anat/sub-balgrist06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-balgrist06/anat/sub-balgrist06_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-balgrist06/anat/sub-balgrist06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-balgrist06/anat/sub-balgrist06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-balgrist06/anat/sub-balgrist06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-balgrist06/anat/sub-balgrist06_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-balgrist06/anat/sub-balgrist06_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-balgrist06/anat/sub-balgrist06_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-balgrist06/anat/sub-balgrist06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-balgrist06/anat/sub-balgrist06_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-balgrist06/anat/sub-balgrist06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-balgrist06/anat/sub-balgrist06_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-balgrist06/anat/sub-balgrist06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-balgrist06/anat/sub-balgrist06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-balgrist06/anat/sub-balgrist06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-balgrist06/anat/sub-balgrist06_space-other_T2star_label-SC_seg.nii.gz b/derivatives/labels/sub-balgrist06/anat/sub-balgrist06_space-other_T2star_label-SC_seg.nii.gz index 3727c31c6f..45338c25a1 100644 --- a/derivatives/labels/sub-balgrist06/anat/sub-balgrist06_space-other_T2star_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-balgrist06/anat/sub-balgrist06_space-other_T2star_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s14900--4c7eacc9fdd47a9b65a33668ae91cf21289f098e2b8c55e1535138a7cc6470ec.nii.gz +/annex/objects/SHA256E-s14921--fa1658eb53901cbd728e7cc3a6fb81d5803b89a957da63a46d1feef7f1769460.nii.gz diff --git a/derivatives/labels/sub-balgrist06/anat/sub-balgrist06_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-balgrist06/anat/sub-balgrist06_space-other_T2star_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-balgrist06/anat/sub-balgrist06_space-other_T2star_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-barcelona01/anat/sub-barcelona01_space-other_T1w_label-discs_dlabel.json b/derivatives/labels/sub-barcelona01/anat/sub-barcelona01_T1w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-barcelona01/anat/sub-barcelona01_space-other_T1w_label-discs_dlabel.json rename to derivatives/labels/sub-barcelona01/anat/sub-barcelona01_T1w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-barcelona01/anat/sub-barcelona01_space-other_T1w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-barcelona01/anat/sub-barcelona01_T1w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-barcelona01/anat/sub-barcelona01_space-other_T1w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-barcelona01/anat/sub-barcelona01_T1w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-barcelona01/anat/sub-barcelona01_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-barcelona01/anat/sub-barcelona01_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-barcelona01/anat/sub-barcelona01_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-barcelona01/anat/sub-barcelona01_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-barcelona01/anat/sub-barcelona01_T2star_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-barcelona01/anat/sub-barcelona01_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-barcelona01/anat/sub-barcelona01_T2star_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-barcelona01/anat/sub-barcelona01_space-other_T2w_label-discs_dlabel.json b/derivatives/labels/sub-barcelona01/anat/sub-barcelona01_T2w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-barcelona01/anat/sub-barcelona01_space-other_T2w_label-discs_dlabel.json rename to derivatives/labels/sub-barcelona01/anat/sub-barcelona01_T2w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-barcelona01/anat/sub-barcelona01_space-other_T2w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-barcelona01/anat/sub-barcelona01_T2w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-barcelona01/anat/sub-barcelona01_space-other_T2w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-barcelona01/anat/sub-barcelona01_T2w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-barcelona01/anat/sub-barcelona01_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-barcelona01/anat/sub-barcelona01_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-barcelona01/anat/sub-barcelona01_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-barcelona01/anat/sub-barcelona01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-barcelona01/anat/sub-barcelona01_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-barcelona01/anat/sub-barcelona01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-barcelona01/anat/sub-barcelona01_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-barcelona01/anat/sub-barcelona01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-barcelona01/anat/sub-barcelona01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-barcelona01/anat/sub-barcelona01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-barcelona01/anat/sub-barcelona01_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-barcelona01/anat/sub-barcelona01_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-barcelona01/anat/sub-barcelona01_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-barcelona01/anat/sub-barcelona01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-barcelona01/anat/sub-barcelona01_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-barcelona01/anat/sub-barcelona01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-barcelona01/anat/sub-barcelona01_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-barcelona01/anat/sub-barcelona01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-barcelona01/anat/sub-barcelona01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-barcelona01/anat/sub-barcelona01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-barcelona01/anat/sub-barcelona01_space-other_T2star_label-SC_seg.nii.gz b/derivatives/labels/sub-barcelona01/anat/sub-barcelona01_space-other_T2star_label-SC_seg.nii.gz index c340a9e6fa..225f32ed39 100644 --- a/derivatives/labels/sub-barcelona01/anat/sub-barcelona01_space-other_T2star_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-barcelona01/anat/sub-barcelona01_space-other_T2star_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s6840--dfa4243ecb0c93bb9ff4d7045064c659ec3b1f3e42827159044b813cae587d0e.nii.gz +/annex/objects/SHA256E-s28358--58fc063bb66d93d75f0695d644993d210da3bf85fdc1b57481024257a3c4846d.nii.gz diff --git a/derivatives/labels/sub-barcelona01/anat/sub-barcelona01_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-barcelona01/anat/sub-barcelona01_space-other_T2star_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-barcelona01/anat/sub-barcelona01_space-other_T2star_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-barcelona02/anat/sub-barcelona02_space-other_T1w_label-discs_dlabel.json b/derivatives/labels/sub-barcelona02/anat/sub-barcelona02_T1w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-barcelona02/anat/sub-barcelona02_space-other_T1w_label-discs_dlabel.json rename to derivatives/labels/sub-barcelona02/anat/sub-barcelona02_T1w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-barcelona02/anat/sub-barcelona02_space-other_T1w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-barcelona02/anat/sub-barcelona02_T1w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-barcelona02/anat/sub-barcelona02_space-other_T1w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-barcelona02/anat/sub-barcelona02_T1w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-barcelona02/anat/sub-barcelona02_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-barcelona02/anat/sub-barcelona02_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-barcelona02/anat/sub-barcelona02_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-barcelona02/anat/sub-barcelona02_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-barcelona02/anat/sub-barcelona02_T2star_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-barcelona02/anat/sub-barcelona02_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-barcelona02/anat/sub-barcelona02_T2star_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-barcelona02/anat/sub-barcelona02_space-other_T2w_label-discs_dlabel.json b/derivatives/labels/sub-barcelona02/anat/sub-barcelona02_T2w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-barcelona02/anat/sub-barcelona02_space-other_T2w_label-discs_dlabel.json rename to derivatives/labels/sub-barcelona02/anat/sub-barcelona02_T2w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-barcelona02/anat/sub-barcelona02_space-other_T2w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-barcelona02/anat/sub-barcelona02_T2w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-barcelona02/anat/sub-barcelona02_space-other_T2w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-barcelona02/anat/sub-barcelona02_T2w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-barcelona02/anat/sub-barcelona02_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-barcelona02/anat/sub-barcelona02_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-barcelona02/anat/sub-barcelona02_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-barcelona02/anat/sub-barcelona02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-barcelona02/anat/sub-barcelona02_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-barcelona02/anat/sub-barcelona02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-barcelona02/anat/sub-barcelona02_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-barcelona02/anat/sub-barcelona02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-barcelona02/anat/sub-barcelona02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-barcelona02/anat/sub-barcelona02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-barcelona02/anat/sub-barcelona02_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-barcelona02/anat/sub-barcelona02_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-barcelona02/anat/sub-barcelona02_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-barcelona02/anat/sub-barcelona02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-barcelona02/anat/sub-barcelona02_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-barcelona02/anat/sub-barcelona02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-barcelona02/anat/sub-barcelona02_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-barcelona02/anat/sub-barcelona02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-barcelona02/anat/sub-barcelona02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-barcelona02/anat/sub-barcelona02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-barcelona02/anat/sub-barcelona02_space-other_T2star_label-SC_seg.nii.gz b/derivatives/labels/sub-barcelona02/anat/sub-barcelona02_space-other_T2star_label-SC_seg.nii.gz index 0b450584ad..5291904f65 100644 --- a/derivatives/labels/sub-barcelona02/anat/sub-barcelona02_space-other_T2star_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-barcelona02/anat/sub-barcelona02_space-other_T2star_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s6863--c1c2f6ad6a3c785b7436ab8d8107f4533c5c532aed9d1955047677c6021f0622.nii.gz +/annex/objects/SHA256E-s28455--6b2880f1bd1c14e53b2b100e2024ec7e0685100ab9f148a827572f2cb3f7c66b.nii.gz diff --git a/derivatives/labels/sub-barcelona02/anat/sub-barcelona02_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-barcelona02/anat/sub-barcelona02_space-other_T2star_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-barcelona02/anat/sub-barcelona02_space-other_T2star_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-barcelona03/anat/sub-barcelona03_space-other_T1w_label-discs_dlabel.json b/derivatives/labels/sub-barcelona03/anat/sub-barcelona03_T1w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-barcelona03/anat/sub-barcelona03_space-other_T1w_label-discs_dlabel.json rename to derivatives/labels/sub-barcelona03/anat/sub-barcelona03_T1w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-barcelona03/anat/sub-barcelona03_space-other_T1w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-barcelona03/anat/sub-barcelona03_T1w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-barcelona03/anat/sub-barcelona03_space-other_T1w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-barcelona03/anat/sub-barcelona03_T1w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-barcelona03/anat/sub-barcelona03_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-barcelona03/anat/sub-barcelona03_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-barcelona03/anat/sub-barcelona03_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-barcelona03/anat/sub-barcelona03_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-barcelona03/anat/sub-barcelona03_T2star_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-barcelona03/anat/sub-barcelona03_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-barcelona03/anat/sub-barcelona03_T2star_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-barcelona03/anat/sub-barcelona03_space-other_T2w_label-discs_dlabel.json b/derivatives/labels/sub-barcelona03/anat/sub-barcelona03_T2w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-barcelona03/anat/sub-barcelona03_space-other_T2w_label-discs_dlabel.json rename to derivatives/labels/sub-barcelona03/anat/sub-barcelona03_T2w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-barcelona03/anat/sub-barcelona03_space-other_T2w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-barcelona03/anat/sub-barcelona03_T2w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-barcelona03/anat/sub-barcelona03_space-other_T2w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-barcelona03/anat/sub-barcelona03_T2w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-barcelona03/anat/sub-barcelona03_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-barcelona03/anat/sub-barcelona03_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-barcelona03/anat/sub-barcelona03_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-barcelona03/anat/sub-barcelona03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-barcelona03/anat/sub-barcelona03_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-barcelona03/anat/sub-barcelona03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-barcelona03/anat/sub-barcelona03_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-barcelona03/anat/sub-barcelona03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-barcelona03/anat/sub-barcelona03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-barcelona03/anat/sub-barcelona03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-barcelona03/anat/sub-barcelona03_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-barcelona03/anat/sub-barcelona03_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-barcelona03/anat/sub-barcelona03_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-barcelona03/anat/sub-barcelona03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-barcelona03/anat/sub-barcelona03_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-barcelona03/anat/sub-barcelona03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-barcelona03/anat/sub-barcelona03_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-barcelona03/anat/sub-barcelona03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-barcelona03/anat/sub-barcelona03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-barcelona03/anat/sub-barcelona03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-barcelona03/anat/sub-barcelona03_space-other_T2star_label-SC_seg.nii.gz b/derivatives/labels/sub-barcelona03/anat/sub-barcelona03_space-other_T2star_label-SC_seg.nii.gz index c92b341596..1f5d1f12a3 100644 --- a/derivatives/labels/sub-barcelona03/anat/sub-barcelona03_space-other_T2star_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-barcelona03/anat/sub-barcelona03_space-other_T2star_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s6892--9c47e0927a865867c40c1fc94a0fb63706b9ab504a80a5e64d380de9e59d4ee3.nii.gz +/annex/objects/SHA256E-s28529--8420e90fd009ee3c4ff3a7a222db467a7bee3b4af725541b8c85fa049470c07d.nii.gz diff --git a/derivatives/labels/sub-barcelona03/anat/sub-barcelona03_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-barcelona03/anat/sub-barcelona03_space-other_T2star_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-barcelona03/anat/sub-barcelona03_space-other_T2star_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-barcelona04/anat/sub-barcelona04_space-other_T1w_label-discs_dlabel.json b/derivatives/labels/sub-barcelona04/anat/sub-barcelona04_T1w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-barcelona04/anat/sub-barcelona04_space-other_T1w_label-discs_dlabel.json rename to derivatives/labels/sub-barcelona04/anat/sub-barcelona04_T1w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-barcelona04/anat/sub-barcelona04_space-other_T1w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-barcelona04/anat/sub-barcelona04_T1w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-barcelona04/anat/sub-barcelona04_space-other_T1w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-barcelona04/anat/sub-barcelona04_T1w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-barcelona04/anat/sub-barcelona04_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-barcelona04/anat/sub-barcelona04_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-barcelona04/anat/sub-barcelona04_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-barcelona04/anat/sub-barcelona04_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-barcelona04/anat/sub-barcelona04_T2star_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-barcelona04/anat/sub-barcelona04_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-barcelona04/anat/sub-barcelona04_T2star_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-barcelona04/anat/sub-barcelona04_space-other_T2w_label-discs_dlabel.json b/derivatives/labels/sub-barcelona04/anat/sub-barcelona04_T2w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-barcelona04/anat/sub-barcelona04_space-other_T2w_label-discs_dlabel.json rename to derivatives/labels/sub-barcelona04/anat/sub-barcelona04_T2w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-barcelona04/anat/sub-barcelona04_space-other_T2w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-barcelona04/anat/sub-barcelona04_T2w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-barcelona04/anat/sub-barcelona04_space-other_T2w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-barcelona04/anat/sub-barcelona04_T2w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-barcelona04/anat/sub-barcelona04_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-barcelona04/anat/sub-barcelona04_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-barcelona04/anat/sub-barcelona04_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-barcelona04/anat/sub-barcelona04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-barcelona04/anat/sub-barcelona04_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-barcelona04/anat/sub-barcelona04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-barcelona04/anat/sub-barcelona04_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-barcelona04/anat/sub-barcelona04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-barcelona04/anat/sub-barcelona04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-barcelona04/anat/sub-barcelona04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-barcelona04/anat/sub-barcelona04_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-barcelona04/anat/sub-barcelona04_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-barcelona04/anat/sub-barcelona04_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-barcelona04/anat/sub-barcelona04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-barcelona04/anat/sub-barcelona04_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-barcelona04/anat/sub-barcelona04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-barcelona04/anat/sub-barcelona04_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-barcelona04/anat/sub-barcelona04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-barcelona04/anat/sub-barcelona04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-barcelona04/anat/sub-barcelona04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-barcelona04/anat/sub-barcelona04_space-other_T2star_label-SC_seg.nii.gz b/derivatives/labels/sub-barcelona04/anat/sub-barcelona04_space-other_T2star_label-SC_seg.nii.gz index 861065dc3d..94c93d304b 100644 --- a/derivatives/labels/sub-barcelona04/anat/sub-barcelona04_space-other_T2star_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-barcelona04/anat/sub-barcelona04_space-other_T2star_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s6915--96b5b9280059cd3a968f74ae9bf255aa88a361251e339b4b848906e0170b3cbc.nii.gz +/annex/objects/SHA256E-s28461--3a3830f126820f6b9d0de23381704dc4532058bc15344536f19cbd78328b39cf.nii.gz diff --git a/derivatives/labels/sub-barcelona04/anat/sub-barcelona04_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-barcelona04/anat/sub-barcelona04_space-other_T2star_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-barcelona04/anat/sub-barcelona04_space-other_T2star_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-barcelona05/anat/sub-barcelona05_space-other_T1w_label-discs_dlabel.json b/derivatives/labels/sub-barcelona05/anat/sub-barcelona05_T1w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-barcelona05/anat/sub-barcelona05_space-other_T1w_label-discs_dlabel.json rename to derivatives/labels/sub-barcelona05/anat/sub-barcelona05_T1w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-barcelona05/anat/sub-barcelona05_space-other_T1w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-barcelona05/anat/sub-barcelona05_T1w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-barcelona05/anat/sub-barcelona05_space-other_T1w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-barcelona05/anat/sub-barcelona05_T1w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-barcelona05/anat/sub-barcelona05_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-barcelona05/anat/sub-barcelona05_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-barcelona05/anat/sub-barcelona05_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-barcelona05/anat/sub-barcelona05_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-barcelona05/anat/sub-barcelona05_T2star_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-barcelona05/anat/sub-barcelona05_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-barcelona05/anat/sub-barcelona05_T2star_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-barcelona05/anat/sub-barcelona05_space-other_T2w_label-discs_dlabel.json b/derivatives/labels/sub-barcelona05/anat/sub-barcelona05_T2w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-barcelona05/anat/sub-barcelona05_space-other_T2w_label-discs_dlabel.json rename to derivatives/labels/sub-barcelona05/anat/sub-barcelona05_T2w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-barcelona05/anat/sub-barcelona05_space-other_T2w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-barcelona05/anat/sub-barcelona05_T2w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-barcelona05/anat/sub-barcelona05_space-other_T2w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-barcelona05/anat/sub-barcelona05_T2w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-barcelona05/anat/sub-barcelona05_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-barcelona05/anat/sub-barcelona05_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-barcelona05/anat/sub-barcelona05_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-barcelona05/anat/sub-barcelona05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-barcelona05/anat/sub-barcelona05_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-barcelona05/anat/sub-barcelona05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-barcelona05/anat/sub-barcelona05_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-barcelona05/anat/sub-barcelona05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-barcelona05/anat/sub-barcelona05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-barcelona05/anat/sub-barcelona05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-barcelona05/anat/sub-barcelona05_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-barcelona05/anat/sub-barcelona05_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-barcelona05/anat/sub-barcelona05_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-barcelona05/anat/sub-barcelona05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-barcelona05/anat/sub-barcelona05_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-barcelona05/anat/sub-barcelona05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-barcelona05/anat/sub-barcelona05_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-barcelona05/anat/sub-barcelona05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-barcelona05/anat/sub-barcelona05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-barcelona05/anat/sub-barcelona05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-barcelona05/anat/sub-barcelona05_space-other_T2star_label-SC_seg.nii.gz b/derivatives/labels/sub-barcelona05/anat/sub-barcelona05_space-other_T2star_label-SC_seg.nii.gz index 39d81e691d..2c2787ac4e 100644 --- a/derivatives/labels/sub-barcelona05/anat/sub-barcelona05_space-other_T2star_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-barcelona05/anat/sub-barcelona05_space-other_T2star_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s6766--c7bd9930db4430e2c1634dcf49e00a6ef1e8d9b8ae2f7d3f1da026799b7b022b.nii.gz +/annex/objects/SHA256E-s28224--a8e189144946450994dd014da3f169fec33d6c80ebc55102667276c09dab205c.nii.gz diff --git a/derivatives/labels/sub-barcelona05/anat/sub-barcelona05_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-barcelona05/anat/sub-barcelona05_space-other_T2star_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-barcelona05/anat/sub-barcelona05_space-other_T2star_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-barcelona05/anat/sub-barcelona05_space-other_T2w_csflabel-SC_seg.json b/derivatives/labels/sub-barcelona05/anat/sub-barcelona05_space-other_T2w_label-CSF_seg.json similarity index 100% rename from derivatives/labels/sub-barcelona05/anat/sub-barcelona05_space-other_T2w_csflabel-SC_seg.json rename to derivatives/labels/sub-barcelona05/anat/sub-barcelona05_space-other_T2w_label-CSF_seg.json diff --git a/derivatives/labels/sub-barcelona05/anat/sub-barcelona05_space-other_T2w_csflabel-SC_seg.nii.gz b/derivatives/labels/sub-barcelona05/anat/sub-barcelona05_space-other_T2w_label-CSF_seg.nii.gz similarity index 100% rename from derivatives/labels/sub-barcelona05/anat/sub-barcelona05_space-other_T2w_csflabel-SC_seg.nii.gz rename to derivatives/labels/sub-barcelona05/anat/sub-barcelona05_space-other_T2w_label-CSF_seg.nii.gz diff --git a/derivatives/labels/sub-barcelona05/anat/sub-barcelona05_space-other_T2w_label-canal_seg.json b/derivatives/labels/sub-barcelona05/anat/sub-barcelona05_space-other_T2w_label-canal_seg.json new file mode 100644 index 0000000000..9b765ae333 --- /dev/null +++ b/derivatives/labels/sub-barcelona05/anat/sub-barcelona05_space-other_T2w_label-canal_seg.json @@ -0,0 +1,11 @@ +{ + "SpatialReference": { + "Orientation": "RPI", + "Resampling": "0.8x0.8x0.8" + }, + "GeneratedBy": [ + { + "Description": "Created from label-CSF_seg" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-barcelona05/anat/sub-barcelona05_space-other_T2w_label-canal_seg.nii.gz b/derivatives/labels/sub-barcelona05/anat/sub-barcelona05_space-other_T2w_label-canal_seg.nii.gz new file mode 100644 index 0000000000..48f8333478 --- /dev/null +++ b/derivatives/labels/sub-barcelona05/anat/sub-barcelona05_space-other_T2w_label-canal_seg.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s145000--12ddcb25fd5a45d5280c6406864132ae8390b8f22fc9ca8b0e77b732671c5ae2.nii.gz diff --git a/derivatives/labels/sub-barcelona06/anat/sub-barcelona06_space-other_T1w_label-discs_dlabel.json b/derivatives/labels/sub-barcelona06/anat/sub-barcelona06_T1w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-barcelona06/anat/sub-barcelona06_space-other_T1w_label-discs_dlabel.json rename to derivatives/labels/sub-barcelona06/anat/sub-barcelona06_T1w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-barcelona06/anat/sub-barcelona06_space-other_T1w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-barcelona06/anat/sub-barcelona06_T1w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-barcelona06/anat/sub-barcelona06_space-other_T1w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-barcelona06/anat/sub-barcelona06_T1w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-barcelona06/anat/sub-barcelona06_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-barcelona06/anat/sub-barcelona06_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-barcelona06/anat/sub-barcelona06_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-barcelona06/anat/sub-barcelona06_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-barcelona06/anat/sub-barcelona06_T2star_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-barcelona06/anat/sub-barcelona06_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-barcelona06/anat/sub-barcelona06_T2star_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-barcelona06/anat/sub-barcelona06_space-other_T2w_label-discs_dlabel.json b/derivatives/labels/sub-barcelona06/anat/sub-barcelona06_T2w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-barcelona06/anat/sub-barcelona06_space-other_T2w_label-discs_dlabel.json rename to derivatives/labels/sub-barcelona06/anat/sub-barcelona06_T2w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-barcelona06/anat/sub-barcelona06_space-other_T2w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-barcelona06/anat/sub-barcelona06_T2w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-barcelona06/anat/sub-barcelona06_space-other_T2w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-barcelona06/anat/sub-barcelona06_T2w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-barcelona06/anat/sub-barcelona06_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-barcelona06/anat/sub-barcelona06_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-barcelona06/anat/sub-barcelona06_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-barcelona06/anat/sub-barcelona06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-barcelona06/anat/sub-barcelona06_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-barcelona06/anat/sub-barcelona06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-barcelona06/anat/sub-barcelona06_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-barcelona06/anat/sub-barcelona06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-barcelona06/anat/sub-barcelona06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-barcelona06/anat/sub-barcelona06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-barcelona06/anat/sub-barcelona06_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-barcelona06/anat/sub-barcelona06_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-barcelona06/anat/sub-barcelona06_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-barcelona06/anat/sub-barcelona06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-barcelona06/anat/sub-barcelona06_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-barcelona06/anat/sub-barcelona06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-barcelona06/anat/sub-barcelona06_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-barcelona06/anat/sub-barcelona06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-barcelona06/anat/sub-barcelona06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-barcelona06/anat/sub-barcelona06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-barcelona06/anat/sub-barcelona06_space-other_T2star_label-SC_seg.nii.gz b/derivatives/labels/sub-barcelona06/anat/sub-barcelona06_space-other_T2star_label-SC_seg.nii.gz index 2b32ff6d37..74b7fe27bc 100644 --- a/derivatives/labels/sub-barcelona06/anat/sub-barcelona06_space-other_T2star_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-barcelona06/anat/sub-barcelona06_space-other_T2star_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s6823--da177f61647f2300613e6c1dfd70cbd7d112b7b871b1b73a9ee7b16b91b7c758.nii.gz +/annex/objects/SHA256E-s28349--00f59d64cb429a6139cc01e17d408302c55bec8e7eceba3fe128ecc0373364da.nii.gz diff --git a/derivatives/labels/sub-barcelona06/anat/sub-barcelona06_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-barcelona06/anat/sub-barcelona06_space-other_T2star_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-barcelona06/anat/sub-barcelona06_space-other_T2star_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-beijingGE01/anat/sub-beijingGE01_space-other_T1w_label-discs_dlabel.json b/derivatives/labels/sub-beijingGE01/anat/sub-beijingGE01_T1w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-beijingGE01/anat/sub-beijingGE01_space-other_T1w_label-discs_dlabel.json rename to derivatives/labels/sub-beijingGE01/anat/sub-beijingGE01_T1w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-beijingGE01/anat/sub-beijingGE01_space-other_T1w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-beijingGE01/anat/sub-beijingGE01_T1w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-beijingGE01/anat/sub-beijingGE01_space-other_T1w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-beijingGE01/anat/sub-beijingGE01_T1w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-beijingGE01/anat/sub-beijingGE01_space-other_T2w_label-discs_dlabel.json b/derivatives/labels/sub-beijingGE01/anat/sub-beijingGE01_T2w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-beijingGE01/anat/sub-beijingGE01_space-other_T2w_label-discs_dlabel.json rename to derivatives/labels/sub-beijingGE01/anat/sub-beijingGE01_T2w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-beijingGE01/anat/sub-beijingGE01_space-other_T2w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-beijingGE01/anat/sub-beijingGE01_T2w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-beijingGE01/anat/sub-beijingGE01_space-other_T2w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-beijingGE01/anat/sub-beijingGE01_T2w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-beijingGE01/anat/sub-beijingGE01_space-other_T2star_label-SC_seg.nii.gz b/derivatives/labels/sub-beijingGE01/anat/sub-beijingGE01_space-other_T2star_label-SC_seg.nii.gz index 0f3dffb0e1..0e6c8df2c3 100644 --- a/derivatives/labels/sub-beijingGE01/anat/sub-beijingGE01_space-other_T2star_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-beijingGE01/anat/sub-beijingGE01_space-other_T2star_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s8703--99c477044b8d0ff74dcaa7efd85627589d52d9919af6389be8b7928cb7cdbbaf.nii.gz +/annex/objects/SHA256E-s36571--c2c5dbb418300b6c32e032210f8ed6ee28a70e7fda54dabfc6f6e88d0f956ff2.nii.gz diff --git a/derivatives/labels/sub-beijingGE02/anat/sub-beijingGE02_space-other_T1w_label-discs_dlabel.json b/derivatives/labels/sub-beijingGE02/anat/sub-beijingGE02_T1w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-beijingGE02/anat/sub-beijingGE02_space-other_T1w_label-discs_dlabel.json rename to derivatives/labels/sub-beijingGE02/anat/sub-beijingGE02_T1w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-beijingGE02/anat/sub-beijingGE02_space-other_T1w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-beijingGE02/anat/sub-beijingGE02_T1w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-beijingGE02/anat/sub-beijingGE02_space-other_T1w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-beijingGE02/anat/sub-beijingGE02_T1w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-beijingGE02/anat/sub-beijingGE02_space-other_T2w_label-discs_dlabel.json b/derivatives/labels/sub-beijingGE02/anat/sub-beijingGE02_T2w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-beijingGE02/anat/sub-beijingGE02_space-other_T2w_label-discs_dlabel.json rename to derivatives/labels/sub-beijingGE02/anat/sub-beijingGE02_T2w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-beijingGE02/anat/sub-beijingGE02_space-other_T2w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-beijingGE02/anat/sub-beijingGE02_T2w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-beijingGE02/anat/sub-beijingGE02_space-other_T2w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-beijingGE02/anat/sub-beijingGE02_T2w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-beijingGE02/anat/sub-beijingGE02_space-other_T2star_label-SC_seg.nii.gz b/derivatives/labels/sub-beijingGE02/anat/sub-beijingGE02_space-other_T2star_label-SC_seg.nii.gz index bdcf843f86..638d879c6e 100644 --- a/derivatives/labels/sub-beijingGE02/anat/sub-beijingGE02_space-other_T2star_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-beijingGE02/anat/sub-beijingGE02_space-other_T2star_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s19174--11cefc3cfbfb8db3455cfdbba3f5ecd94a36e08498a6647975f0916a63d7939d.nii.gz +/annex/objects/SHA256E-s19195--c699afdd2381657ac26ee02db297bf5e86340cf89fcc16c0cd6f2b6ae6032dd9.nii.gz diff --git a/derivatives/labels/sub-beijingGE03/anat/sub-beijingGE03_space-other_T1w_label-discs_dlabel.json b/derivatives/labels/sub-beijingGE03/anat/sub-beijingGE03_T1w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-beijingGE03/anat/sub-beijingGE03_space-other_T1w_label-discs_dlabel.json rename to derivatives/labels/sub-beijingGE03/anat/sub-beijingGE03_T1w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-beijingGE03/anat/sub-beijingGE03_space-other_T1w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-beijingGE03/anat/sub-beijingGE03_T1w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-beijingGE03/anat/sub-beijingGE03_space-other_T1w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-beijingGE03/anat/sub-beijingGE03_T1w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-beijingGE03/anat/sub-beijingGE03_space-other_T2w_label-discs_dlabel.json b/derivatives/labels/sub-beijingGE03/anat/sub-beijingGE03_T2w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-beijingGE03/anat/sub-beijingGE03_space-other_T2w_label-discs_dlabel.json rename to derivatives/labels/sub-beijingGE03/anat/sub-beijingGE03_T2w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-beijingGE03/anat/sub-beijingGE03_space-other_T2w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-beijingGE03/anat/sub-beijingGE03_T2w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-beijingGE03/anat/sub-beijingGE03_space-other_T2w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-beijingGE03/anat/sub-beijingGE03_T2w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-beijingGE03/anat/sub-beijingGE03_space-other_T2star_label-SC_seg.nii.gz b/derivatives/labels/sub-beijingGE03/anat/sub-beijingGE03_space-other_T2star_label-SC_seg.nii.gz index 17cc2acebc..d4826e504d 100644 --- a/derivatives/labels/sub-beijingGE03/anat/sub-beijingGE03_space-other_T2star_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-beijingGE03/anat/sub-beijingGE03_space-other_T2star_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s8728--ff7105b62528a522732dd0671024510fa455c4ae45393d4903aa1f1f8b8b7e00.nii.gz +/annex/objects/SHA256E-s36736--3386e8c8a3faf25d6dd01bcdc17b0578f77aa36f2e4503bafd53ab4728ca2209.nii.gz diff --git a/derivatives/labels/sub-beijingGE04/anat/sub-beijingGE04_space-other_T1w_label-discs_dlabel.json b/derivatives/labels/sub-beijingGE04/anat/sub-beijingGE04_T1w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-beijingGE04/anat/sub-beijingGE04_space-other_T1w_label-discs_dlabel.json rename to derivatives/labels/sub-beijingGE04/anat/sub-beijingGE04_T1w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-beijingGE04/anat/sub-beijingGE04_space-other_T1w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-beijingGE04/anat/sub-beijingGE04_T1w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-beijingGE04/anat/sub-beijingGE04_space-other_T1w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-beijingGE04/anat/sub-beijingGE04_T1w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-beijingGE04/anat/sub-beijingGE04_space-other_T2w_label-discs_dlabel.json b/derivatives/labels/sub-beijingGE04/anat/sub-beijingGE04_T2w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-beijingGE04/anat/sub-beijingGE04_space-other_T2w_label-discs_dlabel.json rename to derivatives/labels/sub-beijingGE04/anat/sub-beijingGE04_T2w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-beijingGE04/anat/sub-beijingGE04_space-other_T2w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-beijingGE04/anat/sub-beijingGE04_T2w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-beijingGE04/anat/sub-beijingGE04_space-other_T2w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-beijingGE04/anat/sub-beijingGE04_T2w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-beijingPrisma01/anat/sub-beijingPrisma01_space-other_T1w_label-discs_dlabel.json b/derivatives/labels/sub-beijingPrisma01/anat/sub-beijingPrisma01_T1w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-beijingPrisma01/anat/sub-beijingPrisma01_space-other_T1w_label-discs_dlabel.json rename to derivatives/labels/sub-beijingPrisma01/anat/sub-beijingPrisma01_T1w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-beijingPrisma01/anat/sub-beijingPrisma01_space-other_T1w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-beijingPrisma01/anat/sub-beijingPrisma01_T1w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-beijingPrisma01/anat/sub-beijingPrisma01_space-other_T1w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-beijingPrisma01/anat/sub-beijingPrisma01_T1w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-beijingPrisma01/anat/sub-beijingPrisma01_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-beijingPrisma01/anat/sub-beijingPrisma01_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-beijingPrisma01/anat/sub-beijingPrisma01_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-beijingPrisma01/anat/sub-beijingPrisma01_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-beijingPrisma01/anat/sub-beijingPrisma01_T2star_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-beijingPrisma01/anat/sub-beijingPrisma01_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-beijingPrisma01/anat/sub-beijingPrisma01_T2star_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-beijingPrisma01/anat/sub-beijingPrisma01_space-other_T2w_label-discs_dlabel.json b/derivatives/labels/sub-beijingPrisma01/anat/sub-beijingPrisma01_T2w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-beijingPrisma01/anat/sub-beijingPrisma01_space-other_T2w_label-discs_dlabel.json rename to derivatives/labels/sub-beijingPrisma01/anat/sub-beijingPrisma01_T2w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-beijingPrisma01/anat/sub-beijingPrisma01_space-other_T2w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-beijingPrisma01/anat/sub-beijingPrisma01_T2w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-beijingPrisma01/anat/sub-beijingPrisma01_space-other_T2w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-beijingPrisma01/anat/sub-beijingPrisma01_T2w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-beijingPrisma01/anat/sub-beijingPrisma01_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-beijingPrisma01/anat/sub-beijingPrisma01_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-beijingPrisma01/anat/sub-beijingPrisma01_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-beijingPrisma01/anat/sub-beijingPrisma01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-beijingPrisma01/anat/sub-beijingPrisma01_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-beijingPrisma01/anat/sub-beijingPrisma01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-beijingPrisma01/anat/sub-beijingPrisma01_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-beijingPrisma01/anat/sub-beijingPrisma01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-beijingPrisma01/anat/sub-beijingPrisma01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-beijingPrisma01/anat/sub-beijingPrisma01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-beijingPrisma01/anat/sub-beijingPrisma01_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-beijingPrisma01/anat/sub-beijingPrisma01_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-beijingPrisma01/anat/sub-beijingPrisma01_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-beijingPrisma01/anat/sub-beijingPrisma01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-beijingPrisma01/anat/sub-beijingPrisma01_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-beijingPrisma01/anat/sub-beijingPrisma01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-beijingPrisma01/anat/sub-beijingPrisma01_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-beijingPrisma01/anat/sub-beijingPrisma01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-beijingPrisma01/anat/sub-beijingPrisma01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-beijingPrisma01/anat/sub-beijingPrisma01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-beijingPrisma01/anat/sub-beijingPrisma01_space-other_T2star_label-SC_seg.nii.gz b/derivatives/labels/sub-beijingPrisma01/anat/sub-beijingPrisma01_space-other_T2star_label-SC_seg.nii.gz index c268ef0351..06fec59fe3 100644 --- a/derivatives/labels/sub-beijingPrisma01/anat/sub-beijingPrisma01_space-other_T2star_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-beijingPrisma01/anat/sub-beijingPrisma01_space-other_T2star_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s6762--0622c4f5f9c1902fb5ff80fa206fe212dcf492636ae2f92bd17e813c244cd7f1.nii.gz +/annex/objects/SHA256E-s28269--55f3ea3fda5cf1ddfb29a35c0d2dbec704288bb1362d840788344a51ebd571cd.nii.gz diff --git a/derivatives/labels/sub-beijingPrisma01/anat/sub-beijingPrisma01_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-beijingPrisma01/anat/sub-beijingPrisma01_space-other_T2star_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-beijingPrisma01/anat/sub-beijingPrisma01_space-other_T2star_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-beijingPrisma02/anat/sub-beijingPrisma02_space-other_T1w_label-discs_dlabel.json b/derivatives/labels/sub-beijingPrisma02/anat/sub-beijingPrisma02_T1w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-beijingPrisma02/anat/sub-beijingPrisma02_space-other_T1w_label-discs_dlabel.json rename to derivatives/labels/sub-beijingPrisma02/anat/sub-beijingPrisma02_T1w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-beijingPrisma02/anat/sub-beijingPrisma02_space-other_T1w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-beijingPrisma02/anat/sub-beijingPrisma02_T1w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-beijingPrisma02/anat/sub-beijingPrisma02_space-other_T1w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-beijingPrisma02/anat/sub-beijingPrisma02_T1w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-beijingPrisma02/anat/sub-beijingPrisma02_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-beijingPrisma02/anat/sub-beijingPrisma02_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-beijingPrisma02/anat/sub-beijingPrisma02_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-beijingPrisma02/anat/sub-beijingPrisma02_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-beijingPrisma02/anat/sub-beijingPrisma02_T2star_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-beijingPrisma02/anat/sub-beijingPrisma02_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-beijingPrisma02/anat/sub-beijingPrisma02_T2star_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-beijingPrisma02/anat/sub-beijingPrisma02_space-other_T2w_label-discs_dlabel.json b/derivatives/labels/sub-beijingPrisma02/anat/sub-beijingPrisma02_T2w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-beijingPrisma02/anat/sub-beijingPrisma02_space-other_T2w_label-discs_dlabel.json rename to derivatives/labels/sub-beijingPrisma02/anat/sub-beijingPrisma02_T2w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-beijingPrisma02/anat/sub-beijingPrisma02_space-other_T2w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-beijingPrisma02/anat/sub-beijingPrisma02_T2w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-beijingPrisma02/anat/sub-beijingPrisma02_space-other_T2w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-beijingPrisma02/anat/sub-beijingPrisma02_T2w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-beijingPrisma02/anat/sub-beijingPrisma02_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-beijingPrisma02/anat/sub-beijingPrisma02_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-beijingPrisma02/anat/sub-beijingPrisma02_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-beijingPrisma02/anat/sub-beijingPrisma02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-beijingPrisma02/anat/sub-beijingPrisma02_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-beijingPrisma02/anat/sub-beijingPrisma02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-beijingPrisma02/anat/sub-beijingPrisma02_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-beijingPrisma02/anat/sub-beijingPrisma02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-beijingPrisma02/anat/sub-beijingPrisma02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-beijingPrisma02/anat/sub-beijingPrisma02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-beijingPrisma02/anat/sub-beijingPrisma02_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-beijingPrisma02/anat/sub-beijingPrisma02_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-beijingPrisma02/anat/sub-beijingPrisma02_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-beijingPrisma02/anat/sub-beijingPrisma02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-beijingPrisma02/anat/sub-beijingPrisma02_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-beijingPrisma02/anat/sub-beijingPrisma02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-beijingPrisma02/anat/sub-beijingPrisma02_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-beijingPrisma02/anat/sub-beijingPrisma02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-beijingPrisma02/anat/sub-beijingPrisma02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-beijingPrisma02/anat/sub-beijingPrisma02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-beijingPrisma02/anat/sub-beijingPrisma02_space-other_T2star_label-SC_seg.nii.gz b/derivatives/labels/sub-beijingPrisma02/anat/sub-beijingPrisma02_space-other_T2star_label-SC_seg.nii.gz index 7ce73443a1..90d6a5e986 100644 --- a/derivatives/labels/sub-beijingPrisma02/anat/sub-beijingPrisma02_space-other_T2star_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-beijingPrisma02/anat/sub-beijingPrisma02_space-other_T2star_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s14747--a5c0e0b8fd4b510b8bc1604ca5f6332259c7f1925a5160dc639f8083fc006b1a.nii.gz +/annex/objects/SHA256E-s14768--ced94394a1a830d9be5d16a929cc03d55e82a5d40d90249a314d209eeb8b5fa1.nii.gz diff --git a/derivatives/labels/sub-beijingPrisma02/anat/sub-beijingPrisma02_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-beijingPrisma02/anat/sub-beijingPrisma02_space-other_T2star_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-beijingPrisma02/anat/sub-beijingPrisma02_space-other_T2star_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-beijingPrisma03/anat/sub-beijingPrisma03_space-other_T1w_label-discs_dlabel.json b/derivatives/labels/sub-beijingPrisma03/anat/sub-beijingPrisma03_T1w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-beijingPrisma03/anat/sub-beijingPrisma03_space-other_T1w_label-discs_dlabel.json rename to derivatives/labels/sub-beijingPrisma03/anat/sub-beijingPrisma03_T1w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-beijingPrisma03/anat/sub-beijingPrisma03_space-other_T1w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-beijingPrisma03/anat/sub-beijingPrisma03_T1w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-beijingPrisma03/anat/sub-beijingPrisma03_space-other_T1w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-beijingPrisma03/anat/sub-beijingPrisma03_T1w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-beijingPrisma03/anat/sub-beijingPrisma03_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-beijingPrisma03/anat/sub-beijingPrisma03_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-beijingPrisma03/anat/sub-beijingPrisma03_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-beijingPrisma03/anat/sub-beijingPrisma03_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-beijingPrisma03/anat/sub-beijingPrisma03_T2star_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-beijingPrisma03/anat/sub-beijingPrisma03_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-beijingPrisma03/anat/sub-beijingPrisma03_T2star_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-beijingPrisma03/anat/sub-beijingPrisma03_space-other_T2w_label-discs_dlabel.json b/derivatives/labels/sub-beijingPrisma03/anat/sub-beijingPrisma03_T2w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-beijingPrisma03/anat/sub-beijingPrisma03_space-other_T2w_label-discs_dlabel.json rename to derivatives/labels/sub-beijingPrisma03/anat/sub-beijingPrisma03_T2w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-beijingPrisma03/anat/sub-beijingPrisma03_space-other_T2w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-beijingPrisma03/anat/sub-beijingPrisma03_T2w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-beijingPrisma03/anat/sub-beijingPrisma03_space-other_T2w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-beijingPrisma03/anat/sub-beijingPrisma03_T2w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-beijingPrisma03/anat/sub-beijingPrisma03_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-beijingPrisma03/anat/sub-beijingPrisma03_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-beijingPrisma03/anat/sub-beijingPrisma03_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-beijingPrisma03/anat/sub-beijingPrisma03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-beijingPrisma03/anat/sub-beijingPrisma03_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-beijingPrisma03/anat/sub-beijingPrisma03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-beijingPrisma03/anat/sub-beijingPrisma03_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-beijingPrisma03/anat/sub-beijingPrisma03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-beijingPrisma03/anat/sub-beijingPrisma03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-beijingPrisma03/anat/sub-beijingPrisma03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-beijingPrisma03/anat/sub-beijingPrisma03_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-beijingPrisma03/anat/sub-beijingPrisma03_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-beijingPrisma03/anat/sub-beijingPrisma03_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-beijingPrisma03/anat/sub-beijingPrisma03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-beijingPrisma03/anat/sub-beijingPrisma03_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-beijingPrisma03/anat/sub-beijingPrisma03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-beijingPrisma03/anat/sub-beijingPrisma03_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-beijingPrisma03/anat/sub-beijingPrisma03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-beijingPrisma03/anat/sub-beijingPrisma03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-beijingPrisma03/anat/sub-beijingPrisma03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-beijingPrisma03/anat/sub-beijingPrisma03_space-other_T2star_label-SC_seg.nii.gz b/derivatives/labels/sub-beijingPrisma03/anat/sub-beijingPrisma03_space-other_T2star_label-SC_seg.nii.gz index f940902c7b..94be062409 100644 --- a/derivatives/labels/sub-beijingPrisma03/anat/sub-beijingPrisma03_space-other_T2star_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-beijingPrisma03/anat/sub-beijingPrisma03_space-other_T2star_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s14735--8b7722b31ce7125fe0d48067e41382bd016e5d29b49ef11a21f15074ce5cd54c.nii.gz +/annex/objects/SHA256E-s14756--e8017bb7aef99278f7dd827731a7ef50c67c80ef10ef22f7cee7b3ae3fa0333b.nii.gz diff --git a/derivatives/labels/sub-beijingPrisma03/anat/sub-beijingPrisma03_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-beijingPrisma03/anat/sub-beijingPrisma03_space-other_T2star_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-beijingPrisma03/anat/sub-beijingPrisma03_space-other_T2star_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-beijingPrisma04/anat/sub-beijingPrisma04_space-other_T1w_label-discs_dlabel.json b/derivatives/labels/sub-beijingPrisma04/anat/sub-beijingPrisma04_T1w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-beijingPrisma04/anat/sub-beijingPrisma04_space-other_T1w_label-discs_dlabel.json rename to derivatives/labels/sub-beijingPrisma04/anat/sub-beijingPrisma04_T1w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-beijingPrisma04/anat/sub-beijingPrisma04_space-other_T1w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-beijingPrisma04/anat/sub-beijingPrisma04_T1w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-beijingPrisma04/anat/sub-beijingPrisma04_space-other_T1w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-beijingPrisma04/anat/sub-beijingPrisma04_T1w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-beijingPrisma04/anat/sub-beijingPrisma04_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-beijingPrisma04/anat/sub-beijingPrisma04_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-beijingPrisma04/anat/sub-beijingPrisma04_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-beijingPrisma04/anat/sub-beijingPrisma04_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-beijingPrisma04/anat/sub-beijingPrisma04_T2star_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-beijingPrisma04/anat/sub-beijingPrisma04_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-beijingPrisma04/anat/sub-beijingPrisma04_T2star_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-beijingPrisma04/anat/sub-beijingPrisma04_space-other_T2w_label-discs_dlabel.json b/derivatives/labels/sub-beijingPrisma04/anat/sub-beijingPrisma04_T2w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-beijingPrisma04/anat/sub-beijingPrisma04_space-other_T2w_label-discs_dlabel.json rename to derivatives/labels/sub-beijingPrisma04/anat/sub-beijingPrisma04_T2w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-beijingPrisma04/anat/sub-beijingPrisma04_space-other_T2w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-beijingPrisma04/anat/sub-beijingPrisma04_T2w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-beijingPrisma04/anat/sub-beijingPrisma04_space-other_T2w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-beijingPrisma04/anat/sub-beijingPrisma04_T2w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-beijingPrisma04/anat/sub-beijingPrisma04_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-beijingPrisma04/anat/sub-beijingPrisma04_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-beijingPrisma04/anat/sub-beijingPrisma04_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-beijingPrisma04/anat/sub-beijingPrisma04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-beijingPrisma04/anat/sub-beijingPrisma04_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-beijingPrisma04/anat/sub-beijingPrisma04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-beijingPrisma04/anat/sub-beijingPrisma04_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-beijingPrisma04/anat/sub-beijingPrisma04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-beijingPrisma04/anat/sub-beijingPrisma04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-beijingPrisma04/anat/sub-beijingPrisma04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-beijingPrisma04/anat/sub-beijingPrisma04_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-beijingPrisma04/anat/sub-beijingPrisma04_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-beijingPrisma04/anat/sub-beijingPrisma04_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-beijingPrisma04/anat/sub-beijingPrisma04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-beijingPrisma04/anat/sub-beijingPrisma04_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-beijingPrisma04/anat/sub-beijingPrisma04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-beijingPrisma04/anat/sub-beijingPrisma04_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-beijingPrisma04/anat/sub-beijingPrisma04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-beijingPrisma04/anat/sub-beijingPrisma04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-beijingPrisma04/anat/sub-beijingPrisma04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-beijingPrisma04/anat/sub-beijingPrisma04_space-other_T2star_label-SC_seg.nii.gz b/derivatives/labels/sub-beijingPrisma04/anat/sub-beijingPrisma04_space-other_T2star_label-SC_seg.nii.gz index cad4ead509..eb36c4baaf 100644 --- a/derivatives/labels/sub-beijingPrisma04/anat/sub-beijingPrisma04_space-other_T2star_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-beijingPrisma04/anat/sub-beijingPrisma04_space-other_T2star_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s14703--7446a8861109de09c5754ebf4331884984316297e3ca69e06ea75097f7f08ba8.nii.gz +/annex/objects/SHA256E-s14724--6b3143d012e5ed512864f2d3291232f84a05ddc9772283bbb499166fbae45c79.nii.gz diff --git a/derivatives/labels/sub-beijingPrisma04/anat/sub-beijingPrisma04_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-beijingPrisma04/anat/sub-beijingPrisma04_space-other_T2star_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-beijingPrisma04/anat/sub-beijingPrisma04_space-other_T2star_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-beijingPrisma05/anat/sub-beijingPrisma05_space-other_T1w_label-discs_dlabel.json b/derivatives/labels/sub-beijingPrisma05/anat/sub-beijingPrisma05_T1w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-beijingPrisma05/anat/sub-beijingPrisma05_space-other_T1w_label-discs_dlabel.json rename to derivatives/labels/sub-beijingPrisma05/anat/sub-beijingPrisma05_T1w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-beijingPrisma05/anat/sub-beijingPrisma05_space-other_T1w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-beijingPrisma05/anat/sub-beijingPrisma05_T1w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-beijingPrisma05/anat/sub-beijingPrisma05_space-other_T1w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-beijingPrisma05/anat/sub-beijingPrisma05_T1w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-beijingPrisma05/anat/sub-beijingPrisma05_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-beijingPrisma05/anat/sub-beijingPrisma05_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-beijingPrisma05/anat/sub-beijingPrisma05_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-beijingPrisma05/anat/sub-beijingPrisma05_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-beijingPrisma05/anat/sub-beijingPrisma05_T2star_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-beijingPrisma05/anat/sub-beijingPrisma05_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-beijingPrisma05/anat/sub-beijingPrisma05_T2star_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-beijingPrisma05/anat/sub-beijingPrisma05_space-other_T2w_label-discs_dlabel.json b/derivatives/labels/sub-beijingPrisma05/anat/sub-beijingPrisma05_T2w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-beijingPrisma05/anat/sub-beijingPrisma05_space-other_T2w_label-discs_dlabel.json rename to derivatives/labels/sub-beijingPrisma05/anat/sub-beijingPrisma05_T2w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-beijingPrisma05/anat/sub-beijingPrisma05_space-other_T2w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-beijingPrisma05/anat/sub-beijingPrisma05_T2w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-beijingPrisma05/anat/sub-beijingPrisma05_space-other_T2w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-beijingPrisma05/anat/sub-beijingPrisma05_T2w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-beijingPrisma05/anat/sub-beijingPrisma05_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-beijingPrisma05/anat/sub-beijingPrisma05_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-beijingPrisma05/anat/sub-beijingPrisma05_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-beijingPrisma05/anat/sub-beijingPrisma05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-beijingPrisma05/anat/sub-beijingPrisma05_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-beijingPrisma05/anat/sub-beijingPrisma05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-beijingPrisma05/anat/sub-beijingPrisma05_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-beijingPrisma05/anat/sub-beijingPrisma05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-beijingPrisma05/anat/sub-beijingPrisma05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-beijingPrisma05/anat/sub-beijingPrisma05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-beijingPrisma05/anat/sub-beijingPrisma05_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-beijingPrisma05/anat/sub-beijingPrisma05_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-beijingPrisma05/anat/sub-beijingPrisma05_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-beijingPrisma05/anat/sub-beijingPrisma05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-beijingPrisma05/anat/sub-beijingPrisma05_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-beijingPrisma05/anat/sub-beijingPrisma05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-beijingPrisma05/anat/sub-beijingPrisma05_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-beijingPrisma05/anat/sub-beijingPrisma05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-beijingPrisma05/anat/sub-beijingPrisma05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-beijingPrisma05/anat/sub-beijingPrisma05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-beijingPrisma05/anat/sub-beijingPrisma05_space-other_T2star_label-SC_seg.nii.gz b/derivatives/labels/sub-beijingPrisma05/anat/sub-beijingPrisma05_space-other_T2star_label-SC_seg.nii.gz index bd94876fdf..aa06264305 100644 --- a/derivatives/labels/sub-beijingPrisma05/anat/sub-beijingPrisma05_space-other_T2star_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-beijingPrisma05/anat/sub-beijingPrisma05_space-other_T2star_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s14849--fc144075d201c1b834ea46541c41f5ab00a6a8803ade19075a7ec17afd5c6288.nii.gz +/annex/objects/SHA256E-s14868--239ea004e021649d634ce05b8dba96ca238b184eccc742cfed28a4faf3e5b481.nii.gz diff --git a/derivatives/labels/sub-beijingPrisma05/anat/sub-beijingPrisma05_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-beijingPrisma05/anat/sub-beijingPrisma05_space-other_T2star_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-beijingPrisma05/anat/sub-beijingPrisma05_space-other_T2star_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-beijingVerio01/anat/sub-beijingVerio01_space-other_T1w_label-discs_dlabel.json b/derivatives/labels/sub-beijingVerio01/anat/sub-beijingVerio01_T1w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-beijingVerio01/anat/sub-beijingVerio01_space-other_T1w_label-discs_dlabel.json rename to derivatives/labels/sub-beijingVerio01/anat/sub-beijingVerio01_T1w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-beijingVerio01/anat/sub-beijingVerio01_space-other_T1w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-beijingVerio01/anat/sub-beijingVerio01_T1w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-beijingVerio01/anat/sub-beijingVerio01_space-other_T1w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-beijingVerio01/anat/sub-beijingVerio01_T1w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-beijingVerio01/anat/sub-beijingVerio01_space-other_T2w_label-discs_dlabel.json b/derivatives/labels/sub-beijingVerio01/anat/sub-beijingVerio01_T2w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-beijingVerio01/anat/sub-beijingVerio01_space-other_T2w_label-discs_dlabel.json rename to derivatives/labels/sub-beijingVerio01/anat/sub-beijingVerio01_T2w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-beijingVerio01/anat/sub-beijingVerio01_space-other_T2w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-beijingVerio01/anat/sub-beijingVerio01_T2w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-beijingVerio01/anat/sub-beijingVerio01_space-other_T2w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-beijingVerio01/anat/sub-beijingVerio01_T2w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-beijingVerio01/anat/sub-beijingVerio01_space-other_T2star_label-SC_seg.nii.gz b/derivatives/labels/sub-beijingVerio01/anat/sub-beijingVerio01_space-other_T2star_label-SC_seg.nii.gz index 2a3b2ac4ad..f26b0241f6 100644 --- a/derivatives/labels/sub-beijingVerio01/anat/sub-beijingVerio01_space-other_T2star_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-beijingVerio01/anat/sub-beijingVerio01_space-other_T2star_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s6830--ea0c71bf0ad933d007f80b5591a37819324f2a40c06d0000111d21e94c58ab47.nii.gz +/annex/objects/SHA256E-s28325--86721632ad15b45856e0f603cf8bec2d38eb5ff36b265017aef6e05c7dc99ef5.nii.gz diff --git a/derivatives/labels/sub-beijingVerio02/anat/sub-beijingVerio02_space-other_T1w_label-discs_dlabel.json b/derivatives/labels/sub-beijingVerio02/anat/sub-beijingVerio02_T1w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-beijingVerio02/anat/sub-beijingVerio02_space-other_T1w_label-discs_dlabel.json rename to derivatives/labels/sub-beijingVerio02/anat/sub-beijingVerio02_T1w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-beijingVerio02/anat/sub-beijingVerio02_space-other_T1w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-beijingVerio02/anat/sub-beijingVerio02_T1w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-beijingVerio02/anat/sub-beijingVerio02_space-other_T1w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-beijingVerio02/anat/sub-beijingVerio02_T1w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-beijingVerio02/anat/sub-beijingVerio02_space-other_T2w_label-discs_dlabel.json b/derivatives/labels/sub-beijingVerio02/anat/sub-beijingVerio02_T2w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-beijingVerio02/anat/sub-beijingVerio02_space-other_T2w_label-discs_dlabel.json rename to derivatives/labels/sub-beijingVerio02/anat/sub-beijingVerio02_T2w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-beijingVerio02/anat/sub-beijingVerio02_space-other_T2w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-beijingVerio02/anat/sub-beijingVerio02_T2w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-beijingVerio02/anat/sub-beijingVerio02_space-other_T2w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-beijingVerio02/anat/sub-beijingVerio02_T2w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-beijingVerio02/anat/sub-beijingVerio02_space-other_T2star_label-SC_seg.nii.gz b/derivatives/labels/sub-beijingVerio02/anat/sub-beijingVerio02_space-other_T2star_label-SC_seg.nii.gz index 6a1975b3bd..89c33288eb 100644 --- a/derivatives/labels/sub-beijingVerio02/anat/sub-beijingVerio02_space-other_T2star_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-beijingVerio02/anat/sub-beijingVerio02_space-other_T2star_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s14861--7a45a6bd0965182834e8d64a13e90e4f337dd9ffbc440be85384b8c74680be56.nii.gz +/annex/objects/SHA256E-s14882--b63c4347bbeb53e777f0bbd159d7fe49742b05160ee182f70de07e8f2834b1f4.nii.gz diff --git a/derivatives/labels/sub-beijingVerio03/anat/sub-beijingVerio03_space-other_T1w_label-discs_dlabel.json b/derivatives/labels/sub-beijingVerio03/anat/sub-beijingVerio03_T1w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-beijingVerio03/anat/sub-beijingVerio03_space-other_T1w_label-discs_dlabel.json rename to derivatives/labels/sub-beijingVerio03/anat/sub-beijingVerio03_T1w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-beijingVerio03/anat/sub-beijingVerio03_space-other_T1w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-beijingVerio03/anat/sub-beijingVerio03_T1w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-beijingVerio03/anat/sub-beijingVerio03_space-other_T1w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-beijingVerio03/anat/sub-beijingVerio03_T1w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-beijingVerio03/anat/sub-beijingVerio03_space-other_T2w_label-discs_dlabel.json b/derivatives/labels/sub-beijingVerio03/anat/sub-beijingVerio03_T2w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-beijingVerio03/anat/sub-beijingVerio03_space-other_T2w_label-discs_dlabel.json rename to derivatives/labels/sub-beijingVerio03/anat/sub-beijingVerio03_T2w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-beijingVerio03/anat/sub-beijingVerio03_space-other_T2w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-beijingVerio03/anat/sub-beijingVerio03_T2w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-beijingVerio03/anat/sub-beijingVerio03_space-other_T2w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-beijingVerio03/anat/sub-beijingVerio03_T2w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-beijingVerio03/anat/sub-beijingVerio03_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.json b/derivatives/labels/sub-beijingVerio03/anat/sub-beijingVerio03_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.json new file mode 100644 index 0000000000..e537a137e5 --- /dev/null +++ b/derivatives/labels/sub-beijingVerio03/anat/sub-beijingVerio03_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.json @@ -0,0 +1,11 @@ +{ + "SpatialReference": { + "Orientation": "RPI", + "Resampling": "1x1x1" + }, + "GeneratedBy": [ + { + "Description": "Manual label of C2 and C5 mid-vertebrae, at the center of the spinal cord." + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-beijingVerio03/anat/sub-beijingVerio03_space-other_T1w_RPI_r_labels-manual.nii.gz b/derivatives/labels/sub-beijingVerio03/anat/sub-beijingVerio03_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-beijingVerio03/anat/sub-beijingVerio03_space-other_T1w_RPI_r_labels-manual.nii.gz rename to derivatives/labels/sub-beijingVerio03/anat/sub-beijingVerio03_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.nii.gz diff --git a/derivatives/labels/sub-beijingVerio03/anat/sub-beijingVerio03_space-other_T2star_label-SC_seg.nii.gz b/derivatives/labels/sub-beijingVerio03/anat/sub-beijingVerio03_space-other_T2star_label-SC_seg.nii.gz index cda5c3f725..477a9f3b86 100644 --- a/derivatives/labels/sub-beijingVerio03/anat/sub-beijingVerio03_space-other_T2star_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-beijingVerio03/anat/sub-beijingVerio03_space-other_T2star_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s6808--f9a70c357ce9794ef92c95b27429ec0e9f5672628dc5de39724dfaf8f878dd68.nii.gz +/annex/objects/SHA256E-s28359--39b87ea01b331a3630a86f4899a073954969895d37fef462aa221566604a6e4e.nii.gz diff --git a/derivatives/labels/sub-beijingVerio04/anat/sub-beijingVerio04_space-other_T1w_label-discs_dlabel.json b/derivatives/labels/sub-beijingVerio04/anat/sub-beijingVerio04_T1w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-beijingVerio04/anat/sub-beijingVerio04_space-other_T1w_label-discs_dlabel.json rename to derivatives/labels/sub-beijingVerio04/anat/sub-beijingVerio04_T1w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-beijingVerio04/anat/sub-beijingVerio04_space-other_T1w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-beijingVerio04/anat/sub-beijingVerio04_T1w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-beijingVerio04/anat/sub-beijingVerio04_space-other_T1w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-beijingVerio04/anat/sub-beijingVerio04_T1w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-beijingVerio04/anat/sub-beijingVerio04_space-other_T2w_label-discs_dlabel.json b/derivatives/labels/sub-beijingVerio04/anat/sub-beijingVerio04_T2w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-beijingVerio04/anat/sub-beijingVerio04_space-other_T2w_label-discs_dlabel.json rename to derivatives/labels/sub-beijingVerio04/anat/sub-beijingVerio04_T2w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-beijingVerio04/anat/sub-beijingVerio04_space-other_T2w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-beijingVerio04/anat/sub-beijingVerio04_T2w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-beijingVerio04/anat/sub-beijingVerio04_space-other_T2w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-beijingVerio04/anat/sub-beijingVerio04_T2w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-beijingVerio04/anat/sub-beijingVerio04_space-other_T2star_label-SC_seg.nii.gz b/derivatives/labels/sub-beijingVerio04/anat/sub-beijingVerio04_space-other_T2star_label-SC_seg.nii.gz index 3faaa99b10..c293fbd9ab 100644 --- a/derivatives/labels/sub-beijingVerio04/anat/sub-beijingVerio04_space-other_T2star_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-beijingVerio04/anat/sub-beijingVerio04_space-other_T2star_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s6823--09343beb192b1da17d891e1d7197a902fdfc29e49878773900f93b40c712def7.nii.gz +/annex/objects/SHA256E-s28379--80d7900ab8916fe0fdb7a21273653d82d933240b50959c6c098b7d9af62fc558.nii.gz diff --git a/derivatives/labels/sub-brnoCeitec01/anat/sub-brnoCeitec01_space-other_T1w_label-discs_dlabel.json b/derivatives/labels/sub-brnoCeitec01/anat/sub-brnoCeitec01_T1w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-brnoCeitec01/anat/sub-brnoCeitec01_space-other_T1w_label-discs_dlabel.json rename to derivatives/labels/sub-brnoCeitec01/anat/sub-brnoCeitec01_T1w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-brnoCeitec01/anat/sub-brnoCeitec01_space-other_T1w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-brnoCeitec01/anat/sub-brnoCeitec01_T1w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-brnoCeitec01/anat/sub-brnoCeitec01_space-other_T1w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-brnoCeitec01/anat/sub-brnoCeitec01_T1w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-brnoCeitec01/anat/sub-brnoCeitec01_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-brnoCeitec01/anat/sub-brnoCeitec01_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-brnoCeitec01/anat/sub-brnoCeitec01_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-brnoCeitec01/anat/sub-brnoCeitec01_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-brnoCeitec01/anat/sub-brnoCeitec01_T2star_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-brnoCeitec01/anat/sub-brnoCeitec01_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-brnoCeitec01/anat/sub-brnoCeitec01_T2star_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-brnoCeitec01/anat/sub-brnoCeitec01_space-other_T2w_label-discs_dlabel.json b/derivatives/labels/sub-brnoCeitec01/anat/sub-brnoCeitec01_T2w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-brnoCeitec01/anat/sub-brnoCeitec01_space-other_T2w_label-discs_dlabel.json rename to derivatives/labels/sub-brnoCeitec01/anat/sub-brnoCeitec01_T2w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-brnoCeitec01/anat/sub-brnoCeitec01_space-other_T2w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-brnoCeitec01/anat/sub-brnoCeitec01_T2w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-brnoCeitec01/anat/sub-brnoCeitec01_space-other_T2w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-brnoCeitec01/anat/sub-brnoCeitec01_T2w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-brnoCeitec01/anat/sub-brnoCeitec01_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-brnoCeitec01/anat/sub-brnoCeitec01_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-brnoCeitec01/anat/sub-brnoCeitec01_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-brnoCeitec01/anat/sub-brnoCeitec01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-brnoCeitec01/anat/sub-brnoCeitec01_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-brnoCeitec01/anat/sub-brnoCeitec01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-brnoCeitec01/anat/sub-brnoCeitec01_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-brnoCeitec01/anat/sub-brnoCeitec01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-brnoCeitec01/anat/sub-brnoCeitec01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-brnoCeitec01/anat/sub-brnoCeitec01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-brnoCeitec01/anat/sub-brnoCeitec01_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-brnoCeitec01/anat/sub-brnoCeitec01_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-brnoCeitec01/anat/sub-brnoCeitec01_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-brnoCeitec01/anat/sub-brnoCeitec01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-brnoCeitec01/anat/sub-brnoCeitec01_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-brnoCeitec01/anat/sub-brnoCeitec01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-brnoCeitec01/anat/sub-brnoCeitec01_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-brnoCeitec01/anat/sub-brnoCeitec01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-brnoCeitec01/anat/sub-brnoCeitec01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-brnoCeitec01/anat/sub-brnoCeitec01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-brnoCeitec01/anat/sub-brnoCeitec01_space-other_T2star_label-SC_seg.nii.gz b/derivatives/labels/sub-brnoCeitec01/anat/sub-brnoCeitec01_space-other_T2star_label-SC_seg.nii.gz index ab2ce57fae..f75bdfe5fb 100644 --- a/derivatives/labels/sub-brnoCeitec01/anat/sub-brnoCeitec01_space-other_T2star_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-brnoCeitec01/anat/sub-brnoCeitec01_space-other_T2star_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s14995--8e01082a70a0a9509086cb05ae759110d867810c161486c15ca4f754b78eeef3.nii.gz +/annex/objects/SHA256E-s15016--9dee57774330c3f8e5660dc117cd50376b9ad0ba930ac96b6a50f951a058bdd2.nii.gz diff --git a/derivatives/labels/sub-brnoCeitec01/anat/sub-brnoCeitec01_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-brnoCeitec01/anat/sub-brnoCeitec01_space-other_T2star_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-brnoCeitec01/anat/sub-brnoCeitec01_space-other_T2star_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-brnoCeitec02/anat/sub-brnoCeitec02_space-other_T1w_label-discs_dlabel.json b/derivatives/labels/sub-brnoCeitec02/anat/sub-brnoCeitec02_T1w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-brnoCeitec02/anat/sub-brnoCeitec02_space-other_T1w_label-discs_dlabel.json rename to derivatives/labels/sub-brnoCeitec02/anat/sub-brnoCeitec02_T1w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-brnoCeitec02/anat/sub-brnoCeitec02_space-other_T1w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-brnoCeitec02/anat/sub-brnoCeitec02_T1w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-brnoCeitec02/anat/sub-brnoCeitec02_space-other_T1w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-brnoCeitec02/anat/sub-brnoCeitec02_T1w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-brnoCeitec02/anat/sub-brnoCeitec02_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-brnoCeitec02/anat/sub-brnoCeitec02_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-brnoCeitec02/anat/sub-brnoCeitec02_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-brnoCeitec02/anat/sub-brnoCeitec02_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-brnoCeitec02/anat/sub-brnoCeitec02_T2star_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-brnoCeitec02/anat/sub-brnoCeitec02_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-brnoCeitec02/anat/sub-brnoCeitec02_T2star_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-brnoCeitec02/anat/sub-brnoCeitec02_space-other_T2w_label-discs_dlabel.json b/derivatives/labels/sub-brnoCeitec02/anat/sub-brnoCeitec02_T2w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-brnoCeitec02/anat/sub-brnoCeitec02_space-other_T2w_label-discs_dlabel.json rename to derivatives/labels/sub-brnoCeitec02/anat/sub-brnoCeitec02_T2w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-brnoCeitec02/anat/sub-brnoCeitec02_space-other_T2w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-brnoCeitec02/anat/sub-brnoCeitec02_T2w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-brnoCeitec02/anat/sub-brnoCeitec02_space-other_T2w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-brnoCeitec02/anat/sub-brnoCeitec02_T2w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-brnoCeitec02/anat/sub-brnoCeitec02_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-brnoCeitec02/anat/sub-brnoCeitec02_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-brnoCeitec02/anat/sub-brnoCeitec02_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-brnoCeitec02/anat/sub-brnoCeitec02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-brnoCeitec02/anat/sub-brnoCeitec02_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-brnoCeitec02/anat/sub-brnoCeitec02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-brnoCeitec02/anat/sub-brnoCeitec02_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-brnoCeitec02/anat/sub-brnoCeitec02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-brnoCeitec02/anat/sub-brnoCeitec02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-brnoCeitec02/anat/sub-brnoCeitec02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-brnoCeitec02/anat/sub-brnoCeitec02_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-brnoCeitec02/anat/sub-brnoCeitec02_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-brnoCeitec02/anat/sub-brnoCeitec02_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-brnoCeitec02/anat/sub-brnoCeitec02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-brnoCeitec02/anat/sub-brnoCeitec02_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-brnoCeitec02/anat/sub-brnoCeitec02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-brnoCeitec02/anat/sub-brnoCeitec02_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-brnoCeitec02/anat/sub-brnoCeitec02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-brnoCeitec02/anat/sub-brnoCeitec02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-brnoCeitec02/anat/sub-brnoCeitec02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-brnoCeitec02/anat/sub-brnoCeitec02_space-other_T2star_label-SC_seg.nii.gz b/derivatives/labels/sub-brnoCeitec02/anat/sub-brnoCeitec02_space-other_T2star_label-SC_seg.nii.gz index a0c5735e0e..795c54c61d 100644 --- a/derivatives/labels/sub-brnoCeitec02/anat/sub-brnoCeitec02_space-other_T2star_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-brnoCeitec02/anat/sub-brnoCeitec02_space-other_T2star_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s14967--a154342a37953644fd3bdebc7689dffb973303b75309880e4feb6d126fb059d4.nii.gz +/annex/objects/SHA256E-s14988--6c7f5202d6c11e6dc5c042b3e2013e8037a003654508993f55d4207b7725c51d.nii.gz diff --git a/derivatives/labels/sub-brnoCeitec02/anat/sub-brnoCeitec02_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-brnoCeitec02/anat/sub-brnoCeitec02_space-other_T2star_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-brnoCeitec02/anat/sub-brnoCeitec02_space-other_T2star_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-brnoCeitec03/anat/sub-brnoCeitec03_space-other_T1w_label-discs_dlabel.json b/derivatives/labels/sub-brnoCeitec03/anat/sub-brnoCeitec03_T1w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-brnoCeitec03/anat/sub-brnoCeitec03_space-other_T1w_label-discs_dlabel.json rename to derivatives/labels/sub-brnoCeitec03/anat/sub-brnoCeitec03_T1w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-brnoCeitec03/anat/sub-brnoCeitec03_space-other_T1w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-brnoCeitec03/anat/sub-brnoCeitec03_T1w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-brnoCeitec03/anat/sub-brnoCeitec03_space-other_T1w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-brnoCeitec03/anat/sub-brnoCeitec03_T1w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-brnoCeitec03/anat/sub-brnoCeitec03_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-brnoCeitec03/anat/sub-brnoCeitec03_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-brnoCeitec03/anat/sub-brnoCeitec03_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-brnoCeitec03/anat/sub-brnoCeitec03_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-brnoCeitec03/anat/sub-brnoCeitec03_T2star_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-brnoCeitec03/anat/sub-brnoCeitec03_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-brnoCeitec03/anat/sub-brnoCeitec03_T2star_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-brnoCeitec03/anat/sub-brnoCeitec03_space-other_T2w_label-discs_dlabel.json b/derivatives/labels/sub-brnoCeitec03/anat/sub-brnoCeitec03_T2w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-brnoCeitec03/anat/sub-brnoCeitec03_space-other_T2w_label-discs_dlabel.json rename to derivatives/labels/sub-brnoCeitec03/anat/sub-brnoCeitec03_T2w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-brnoCeitec03/anat/sub-brnoCeitec03_space-other_T2w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-brnoCeitec03/anat/sub-brnoCeitec03_T2w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-brnoCeitec03/anat/sub-brnoCeitec03_space-other_T2w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-brnoCeitec03/anat/sub-brnoCeitec03_T2w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-brnoCeitec03/anat/sub-brnoCeitec03_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-brnoCeitec03/anat/sub-brnoCeitec03_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-brnoCeitec03/anat/sub-brnoCeitec03_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-brnoCeitec03/anat/sub-brnoCeitec03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-brnoCeitec03/anat/sub-brnoCeitec03_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-brnoCeitec03/anat/sub-brnoCeitec03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-brnoCeitec03/anat/sub-brnoCeitec03_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-brnoCeitec03/anat/sub-brnoCeitec03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-brnoCeitec03/anat/sub-brnoCeitec03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-brnoCeitec03/anat/sub-brnoCeitec03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-brnoCeitec03/anat/sub-brnoCeitec03_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-brnoCeitec03/anat/sub-brnoCeitec03_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-brnoCeitec03/anat/sub-brnoCeitec03_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-brnoCeitec03/anat/sub-brnoCeitec03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-brnoCeitec03/anat/sub-brnoCeitec03_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-brnoCeitec03/anat/sub-brnoCeitec03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-brnoCeitec03/anat/sub-brnoCeitec03_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-brnoCeitec03/anat/sub-brnoCeitec03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-brnoCeitec03/anat/sub-brnoCeitec03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-brnoCeitec03/anat/sub-brnoCeitec03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-brnoCeitec03/anat/sub-brnoCeitec03_space-other_T2star_label-SC_seg.nii.gz b/derivatives/labels/sub-brnoCeitec03/anat/sub-brnoCeitec03_space-other_T2star_label-SC_seg.nii.gz index f2df0a89fb..f88e4ae67c 100644 --- a/derivatives/labels/sub-brnoCeitec03/anat/sub-brnoCeitec03_space-other_T2star_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-brnoCeitec03/anat/sub-brnoCeitec03_space-other_T2star_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s14909--5b11d5264f7a9c0f674e069bcf31920f77de73541f6ffd3031bd56b43e05c666.nii.gz +/annex/objects/SHA256E-s14930--4d2c8a1d106eefad5e81ef3608ddb48cd4fb91887cad7af3986e22e1491b7bdf.nii.gz diff --git a/derivatives/labels/sub-brnoCeitec03/anat/sub-brnoCeitec03_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-brnoCeitec03/anat/sub-brnoCeitec03_space-other_T2star_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-brnoCeitec03/anat/sub-brnoCeitec03_space-other_T2star_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-brnoCeitec04/anat/sub-brnoCeitec04_space-other_T1w_label-discs_dlabel.json b/derivatives/labels/sub-brnoCeitec04/anat/sub-brnoCeitec04_T1w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-brnoCeitec04/anat/sub-brnoCeitec04_space-other_T1w_label-discs_dlabel.json rename to derivatives/labels/sub-brnoCeitec04/anat/sub-brnoCeitec04_T1w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-brnoCeitec04/anat/sub-brnoCeitec04_space-other_T1w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-brnoCeitec04/anat/sub-brnoCeitec04_T1w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-brnoCeitec04/anat/sub-brnoCeitec04_space-other_T1w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-brnoCeitec04/anat/sub-brnoCeitec04_T1w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-brnoCeitec04/anat/sub-brnoCeitec04_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-brnoCeitec04/anat/sub-brnoCeitec04_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-brnoCeitec04/anat/sub-brnoCeitec04_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-brnoCeitec04/anat/sub-brnoCeitec04_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-brnoCeitec04/anat/sub-brnoCeitec04_T2star_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-brnoCeitec04/anat/sub-brnoCeitec04_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-brnoCeitec04/anat/sub-brnoCeitec04_T2star_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-brnoCeitec04/anat/sub-brnoCeitec04_space-other_T2w_label-discs_dlabel.json b/derivatives/labels/sub-brnoCeitec04/anat/sub-brnoCeitec04_T2w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-brnoCeitec04/anat/sub-brnoCeitec04_space-other_T2w_label-discs_dlabel.json rename to derivatives/labels/sub-brnoCeitec04/anat/sub-brnoCeitec04_T2w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-brnoCeitec04/anat/sub-brnoCeitec04_space-other_T2w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-brnoCeitec04/anat/sub-brnoCeitec04_T2w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-brnoCeitec04/anat/sub-brnoCeitec04_space-other_T2w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-brnoCeitec04/anat/sub-brnoCeitec04_T2w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-brnoCeitec04/anat/sub-brnoCeitec04_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-brnoCeitec04/anat/sub-brnoCeitec04_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-brnoCeitec04/anat/sub-brnoCeitec04_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-brnoCeitec04/anat/sub-brnoCeitec04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-brnoCeitec04/anat/sub-brnoCeitec04_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-brnoCeitec04/anat/sub-brnoCeitec04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-brnoCeitec04/anat/sub-brnoCeitec04_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-brnoCeitec04/anat/sub-brnoCeitec04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-brnoCeitec04/anat/sub-brnoCeitec04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-brnoCeitec04/anat/sub-brnoCeitec04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-brnoCeitec04/anat/sub-brnoCeitec04_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-brnoCeitec04/anat/sub-brnoCeitec04_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-brnoCeitec04/anat/sub-brnoCeitec04_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-brnoCeitec04/anat/sub-brnoCeitec04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-brnoCeitec04/anat/sub-brnoCeitec04_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-brnoCeitec04/anat/sub-brnoCeitec04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-brnoCeitec04/anat/sub-brnoCeitec04_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-brnoCeitec04/anat/sub-brnoCeitec04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-brnoCeitec04/anat/sub-brnoCeitec04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-brnoCeitec04/anat/sub-brnoCeitec04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-brnoCeitec04/anat/sub-brnoCeitec04_space-other_T2star_label-SC_seg.nii.gz b/derivatives/labels/sub-brnoCeitec04/anat/sub-brnoCeitec04_space-other_T2star_label-SC_seg.nii.gz index 865f619289..0cb5b8d4ff 100644 --- a/derivatives/labels/sub-brnoCeitec04/anat/sub-brnoCeitec04_space-other_T2star_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-brnoCeitec04/anat/sub-brnoCeitec04_space-other_T2star_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s14920--f31976e3080cb824c8302af65a49890b0c8d27c9bc743d22d22137ac6837ce1b.nii.gz +/annex/objects/SHA256E-s14941--486908cc94f5afe70ea9e8bdbd9b7589bb349fa7ac364f5365e614dc4137edb2.nii.gz diff --git a/derivatives/labels/sub-brnoCeitec04/anat/sub-brnoCeitec04_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-brnoCeitec04/anat/sub-brnoCeitec04_space-other_T2star_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-brnoCeitec04/anat/sub-brnoCeitec04_space-other_T2star_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-brnoCeitec05/anat/sub-brnoCeitec05_space-other_T1w_label-discs_dlabel.json b/derivatives/labels/sub-brnoCeitec05/anat/sub-brnoCeitec05_T1w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-brnoCeitec05/anat/sub-brnoCeitec05_space-other_T1w_label-discs_dlabel.json rename to derivatives/labels/sub-brnoCeitec05/anat/sub-brnoCeitec05_T1w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-brnoCeitec05/anat/sub-brnoCeitec05_space-other_T1w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-brnoCeitec05/anat/sub-brnoCeitec05_T1w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-brnoCeitec05/anat/sub-brnoCeitec05_space-other_T1w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-brnoCeitec05/anat/sub-brnoCeitec05_T1w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-brnoCeitec05/anat/sub-brnoCeitec05_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-brnoCeitec05/anat/sub-brnoCeitec05_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-brnoCeitec05/anat/sub-brnoCeitec05_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-brnoCeitec05/anat/sub-brnoCeitec05_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-brnoCeitec05/anat/sub-brnoCeitec05_T2star_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-brnoCeitec05/anat/sub-brnoCeitec05_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-brnoCeitec05/anat/sub-brnoCeitec05_T2star_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-brnoCeitec05/anat/sub-brnoCeitec05_space-other_T2w_label-discs_dlabel.json b/derivatives/labels/sub-brnoCeitec05/anat/sub-brnoCeitec05_T2w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-brnoCeitec05/anat/sub-brnoCeitec05_space-other_T2w_label-discs_dlabel.json rename to derivatives/labels/sub-brnoCeitec05/anat/sub-brnoCeitec05_T2w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-brnoCeitec05/anat/sub-brnoCeitec05_space-other_T2w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-brnoCeitec05/anat/sub-brnoCeitec05_T2w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-brnoCeitec05/anat/sub-brnoCeitec05_space-other_T2w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-brnoCeitec05/anat/sub-brnoCeitec05_T2w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-brnoCeitec05/anat/sub-brnoCeitec05_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-brnoCeitec05/anat/sub-brnoCeitec05_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-brnoCeitec05/anat/sub-brnoCeitec05_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-brnoCeitec05/anat/sub-brnoCeitec05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-brnoCeitec05/anat/sub-brnoCeitec05_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-brnoCeitec05/anat/sub-brnoCeitec05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-brnoCeitec05/anat/sub-brnoCeitec05_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-brnoCeitec05/anat/sub-brnoCeitec05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-brnoCeitec05/anat/sub-brnoCeitec05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-brnoCeitec05/anat/sub-brnoCeitec05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-brnoCeitec05/anat/sub-brnoCeitec05_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-brnoCeitec05/anat/sub-brnoCeitec05_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-brnoCeitec05/anat/sub-brnoCeitec05_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-brnoCeitec05/anat/sub-brnoCeitec05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-brnoCeitec05/anat/sub-brnoCeitec05_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-brnoCeitec05/anat/sub-brnoCeitec05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-brnoCeitec05/anat/sub-brnoCeitec05_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-brnoCeitec05/anat/sub-brnoCeitec05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-brnoCeitec05/anat/sub-brnoCeitec05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-brnoCeitec05/anat/sub-brnoCeitec05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-brnoCeitec05/anat/sub-brnoCeitec05_space-other_T2star_label-SC_seg.nii.gz b/derivatives/labels/sub-brnoCeitec05/anat/sub-brnoCeitec05_space-other_T2star_label-SC_seg.nii.gz index ede9524d94..4f20f4b500 100644 --- a/derivatives/labels/sub-brnoCeitec05/anat/sub-brnoCeitec05_space-other_T2star_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-brnoCeitec05/anat/sub-brnoCeitec05_space-other_T2star_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s14966--e0f65823e10f302d644ebe71223819b271dea139524b405fd1a7f756727b1ce2.nii.gz +/annex/objects/SHA256E-s14987--79de26bb0e20897e820c4b046a30a06b80958eb21cac91976ddec0d6532f451e.nii.gz diff --git a/derivatives/labels/sub-brnoCeitec05/anat/sub-brnoCeitec05_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-brnoCeitec05/anat/sub-brnoCeitec05_space-other_T2star_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-brnoCeitec05/anat/sub-brnoCeitec05_space-other_T2star_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-brnoCeitec06/anat/sub-brnoCeitec06_space-other_T1w_label-discs_dlabel.json b/derivatives/labels/sub-brnoCeitec06/anat/sub-brnoCeitec06_T1w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-brnoCeitec06/anat/sub-brnoCeitec06_space-other_T1w_label-discs_dlabel.json rename to derivatives/labels/sub-brnoCeitec06/anat/sub-brnoCeitec06_T1w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-brnoCeitec06/anat/sub-brnoCeitec06_space-other_T1w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-brnoCeitec06/anat/sub-brnoCeitec06_T1w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-brnoCeitec06/anat/sub-brnoCeitec06_space-other_T1w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-brnoCeitec06/anat/sub-brnoCeitec06_T1w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-brnoCeitec06/anat/sub-brnoCeitec06_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-brnoCeitec06/anat/sub-brnoCeitec06_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-brnoCeitec06/anat/sub-brnoCeitec06_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-brnoCeitec06/anat/sub-brnoCeitec06_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-brnoCeitec06/anat/sub-brnoCeitec06_T2star_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-brnoCeitec06/anat/sub-brnoCeitec06_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-brnoCeitec06/anat/sub-brnoCeitec06_T2star_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-brnoCeitec06/anat/sub-brnoCeitec06_space-other_T2w_label-discs_dlabel.json b/derivatives/labels/sub-brnoCeitec06/anat/sub-brnoCeitec06_T2w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-brnoCeitec06/anat/sub-brnoCeitec06_space-other_T2w_label-discs_dlabel.json rename to derivatives/labels/sub-brnoCeitec06/anat/sub-brnoCeitec06_T2w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-brnoCeitec06/anat/sub-brnoCeitec06_space-other_T2w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-brnoCeitec06/anat/sub-brnoCeitec06_T2w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-brnoCeitec06/anat/sub-brnoCeitec06_space-other_T2w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-brnoCeitec06/anat/sub-brnoCeitec06_T2w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-brnoCeitec06/anat/sub-brnoCeitec06_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-brnoCeitec06/anat/sub-brnoCeitec06_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-brnoCeitec06/anat/sub-brnoCeitec06_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-brnoCeitec06/anat/sub-brnoCeitec06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-brnoCeitec06/anat/sub-brnoCeitec06_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-brnoCeitec06/anat/sub-brnoCeitec06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-brnoCeitec06/anat/sub-brnoCeitec06_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-brnoCeitec06/anat/sub-brnoCeitec06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-brnoCeitec06/anat/sub-brnoCeitec06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-brnoCeitec06/anat/sub-brnoCeitec06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-brnoCeitec06/anat/sub-brnoCeitec06_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-brnoCeitec06/anat/sub-brnoCeitec06_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-brnoCeitec06/anat/sub-brnoCeitec06_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-brnoCeitec06/anat/sub-brnoCeitec06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-brnoCeitec06/anat/sub-brnoCeitec06_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-brnoCeitec06/anat/sub-brnoCeitec06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-brnoCeitec06/anat/sub-brnoCeitec06_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-brnoCeitec06/anat/sub-brnoCeitec06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-brnoCeitec06/anat/sub-brnoCeitec06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-brnoCeitec06/anat/sub-brnoCeitec06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-brnoCeitec06/anat/sub-brnoCeitec06_space-other_T2star_label-SC_seg.nii.gz b/derivatives/labels/sub-brnoCeitec06/anat/sub-brnoCeitec06_space-other_T2star_label-SC_seg.nii.gz index e0a7278e1c..27524c99ca 100644 --- a/derivatives/labels/sub-brnoCeitec06/anat/sub-brnoCeitec06_space-other_T2star_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-brnoCeitec06/anat/sub-brnoCeitec06_space-other_T2star_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s14904--2d049123cf90ee8c3d1823932918f78924321a553bcbb15466d807f73430635f.nii.gz +/annex/objects/SHA256E-s14925--a0163a317385a9282b03939c06314d91279ed00ce2fda09d7b126e84a29cab26.nii.gz diff --git a/derivatives/labels/sub-brnoCeitec06/anat/sub-brnoCeitec06_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-brnoCeitec06/anat/sub-brnoCeitec06_space-other_T2star_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-brnoCeitec06/anat/sub-brnoCeitec06_space-other_T2star_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-brnoUhb01/anat/sub-brnoUhb01_space-other_T1w_label-discs_dlabel.json b/derivatives/labels/sub-brnoUhb01/anat/sub-brnoUhb01_T1w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-brnoUhb01/anat/sub-brnoUhb01_space-other_T1w_label-discs_dlabel.json rename to derivatives/labels/sub-brnoUhb01/anat/sub-brnoUhb01_T1w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-brnoUhb01/anat/sub-brnoUhb01_space-other_T1w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-brnoUhb01/anat/sub-brnoUhb01_T1w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-brnoUhb01/anat/sub-brnoUhb01_space-other_T1w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-brnoUhb01/anat/sub-brnoUhb01_T1w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-brnoUhb01/anat/sub-brnoUhb01_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-brnoUhb01/anat/sub-brnoUhb01_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-brnoUhb01/anat/sub-brnoUhb01_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-brnoUhb01/anat/sub-brnoUhb01_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-brnoUhb01/anat/sub-brnoUhb01_T2star_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-brnoUhb01/anat/sub-brnoUhb01_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-brnoUhb01/anat/sub-brnoUhb01_T2star_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-brnoUhb01/anat/sub-brnoUhb01_space-other_T2w_label-discs_dlabel.json b/derivatives/labels/sub-brnoUhb01/anat/sub-brnoUhb01_T2w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-brnoUhb01/anat/sub-brnoUhb01_space-other_T2w_label-discs_dlabel.json rename to derivatives/labels/sub-brnoUhb01/anat/sub-brnoUhb01_T2w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-brnoUhb01/anat/sub-brnoUhb01_space-other_T2w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-brnoUhb01/anat/sub-brnoUhb01_T2w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-brnoUhb01/anat/sub-brnoUhb01_space-other_T2w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-brnoUhb01/anat/sub-brnoUhb01_T2w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-brnoUhb01/anat/sub-brnoUhb01_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-brnoUhb01/anat/sub-brnoUhb01_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-brnoUhb01/anat/sub-brnoUhb01_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-brnoUhb01/anat/sub-brnoUhb01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-brnoUhb01/anat/sub-brnoUhb01_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-brnoUhb01/anat/sub-brnoUhb01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-brnoUhb01/anat/sub-brnoUhb01_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-brnoUhb01/anat/sub-brnoUhb01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-brnoUhb01/anat/sub-brnoUhb01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-brnoUhb01/anat/sub-brnoUhb01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-brnoUhb01/anat/sub-brnoUhb01_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-brnoUhb01/anat/sub-brnoUhb01_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-brnoUhb01/anat/sub-brnoUhb01_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-brnoUhb01/anat/sub-brnoUhb01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-brnoUhb01/anat/sub-brnoUhb01_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-brnoUhb01/anat/sub-brnoUhb01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-brnoUhb01/anat/sub-brnoUhb01_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-brnoUhb01/anat/sub-brnoUhb01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-brnoUhb01/anat/sub-brnoUhb01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-brnoUhb01/anat/sub-brnoUhb01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-brnoUhb01/anat/sub-brnoUhb01_space-other_T1w_RPI_r_labels-manual.json b/derivatives/labels/sub-brnoUhb01/anat/sub-brnoUhb01_space-other_T1w_RPI_r_labels-manual.json deleted file mode 100644 index fa5c9ee359..0000000000 --- a/derivatives/labels/sub-brnoUhb01/anat/sub-brnoUhb01_space-other_T1w_RPI_r_labels-manual.json +++ /dev/null @@ -1,4 +0,0 @@ -{ - "Author": "Paul Bautin", - "Date": "2020-07-30 11:57:36" -} \ No newline at end of file diff --git a/derivatives/labels/sub-brnoUhb01/anat/sub-brnoUhb01_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.json b/derivatives/labels/sub-brnoUhb01/anat/sub-brnoUhb01_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.json new file mode 100644 index 0000000000..3b21a03c63 --- /dev/null +++ b/derivatives/labels/sub-brnoUhb01/anat/sub-brnoUhb01_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.json @@ -0,0 +1,13 @@ +{ + "SpatialReference": { + "Orientation": "RPI", + "Resampling": "1x1x1" + }, + "GeneratedBy": [ + { + "Author": "Paul Bautin", + "Date": "2020-07-30 11:57:36", + "Description": "Manual label of C2 and C5 mid-vertebrae, at the center of the spinal cord." + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-brnoUhb01/anat/sub-brnoUhb01_space-other_T1w_RPI_r_labels-manual.nii.gz b/derivatives/labels/sub-brnoUhb01/anat/sub-brnoUhb01_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-brnoUhb01/anat/sub-brnoUhb01_space-other_T1w_RPI_r_labels-manual.nii.gz rename to derivatives/labels/sub-brnoUhb01/anat/sub-brnoUhb01_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.nii.gz diff --git a/derivatives/labels/sub-brnoUhb01/anat/sub-brnoUhb01_space-other_T2star_label-SC_seg.nii.gz b/derivatives/labels/sub-brnoUhb01/anat/sub-brnoUhb01_space-other_T2star_label-SC_seg.nii.gz index e191da0dec..f0db7764c5 100644 --- a/derivatives/labels/sub-brnoUhb01/anat/sub-brnoUhb01_space-other_T2star_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-brnoUhb01/anat/sub-brnoUhb01_space-other_T2star_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s19290--070296ab73645e5e357dfa93ae62511408ccd8cc3c5f1171e7ea37958c20daaf.nii.gz +/annex/objects/SHA256E-s19311--bec870eb36ee33f2468e96f14b2433ecf413b4c10c0760353a79f1ad7b417fe8.nii.gz diff --git a/derivatives/labels/sub-brnoUhb01/anat/sub-brnoUhb01_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-brnoUhb01/anat/sub-brnoUhb01_space-other_T2star_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-brnoUhb01/anat/sub-brnoUhb01_space-other_T2star_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-brnoUhb02/anat/sub-brnoUhb02_space-other_T1w_label-discs_dlabel.json b/derivatives/labels/sub-brnoUhb02/anat/sub-brnoUhb02_T1w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-brnoUhb02/anat/sub-brnoUhb02_space-other_T1w_label-discs_dlabel.json rename to derivatives/labels/sub-brnoUhb02/anat/sub-brnoUhb02_T1w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-brnoUhb02/anat/sub-brnoUhb02_space-other_T1w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-brnoUhb02/anat/sub-brnoUhb02_T1w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-brnoUhb02/anat/sub-brnoUhb02_space-other_T1w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-brnoUhb02/anat/sub-brnoUhb02_T1w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-brnoUhb02/anat/sub-brnoUhb02_space-other_T2w_label-discs_dlabel.json b/derivatives/labels/sub-brnoUhb02/anat/sub-brnoUhb02_T2w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-brnoUhb02/anat/sub-brnoUhb02_space-other_T2w_label-discs_dlabel.json rename to derivatives/labels/sub-brnoUhb02/anat/sub-brnoUhb02_T2w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-brnoUhb02/anat/sub-brnoUhb02_space-other_T2w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-brnoUhb02/anat/sub-brnoUhb02_T2w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-brnoUhb02/anat/sub-brnoUhb02_space-other_T2w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-brnoUhb02/anat/sub-brnoUhb02_T2w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-brnoUhb02/anat/sub-brnoUhb02_space-other_T2star_label-SC_seg.nii.gz b/derivatives/labels/sub-brnoUhb02/anat/sub-brnoUhb02_space-other_T2star_label-SC_seg.nii.gz index 1a2e3ca18d..69cb04fbc6 100644 --- a/derivatives/labels/sub-brnoUhb02/anat/sub-brnoUhb02_space-other_T2star_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-brnoUhb02/anat/sub-brnoUhb02_space-other_T2star_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s8660--95fd4a01cbd013c5f62898d81f6c6f7464d13975658a6b7d5599ee5b701ca123.nii.gz +/annex/objects/SHA256E-s36591--5169bbe5112b5ced6dcb34fda23347136466911021f7a1d45c6dcad447dd8f22.nii.gz diff --git a/derivatives/labels/sub-brnoUhb03/anat/sub-brnoUhb03_space-other_T1w_label-discs_dlabel.json b/derivatives/labels/sub-brnoUhb03/anat/sub-brnoUhb03_T1w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-brnoUhb03/anat/sub-brnoUhb03_space-other_T1w_label-discs_dlabel.json rename to derivatives/labels/sub-brnoUhb03/anat/sub-brnoUhb03_T1w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-brnoUhb03/anat/sub-brnoUhb03_space-other_T1w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-brnoUhb03/anat/sub-brnoUhb03_T1w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-brnoUhb03/anat/sub-brnoUhb03_space-other_T1w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-brnoUhb03/anat/sub-brnoUhb03_T1w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-brnoUhb03/anat/sub-brnoUhb03_space-other_T2w_label-discs_dlabel.json b/derivatives/labels/sub-brnoUhb03/anat/sub-brnoUhb03_T2w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-brnoUhb03/anat/sub-brnoUhb03_space-other_T2w_label-discs_dlabel.json rename to derivatives/labels/sub-brnoUhb03/anat/sub-brnoUhb03_T2w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-brnoUhb03/anat/sub-brnoUhb03_space-other_T2w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-brnoUhb03/anat/sub-brnoUhb03_T2w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-brnoUhb03/anat/sub-brnoUhb03_space-other_T2w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-brnoUhb03/anat/sub-brnoUhb03_T2w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-brnoUhb03/anat/sub-brnoUhb03_space-other_T2star_label-SC_seg.nii.gz b/derivatives/labels/sub-brnoUhb03/anat/sub-brnoUhb03_space-other_T2star_label-SC_seg.nii.gz index 3f90bd9177..ceeb9db5b8 100644 --- a/derivatives/labels/sub-brnoUhb03/anat/sub-brnoUhb03_space-other_T2star_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-brnoUhb03/anat/sub-brnoUhb03_space-other_T2star_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s8733--bdb7bdf47f4bedf87ddf395a91badf94e4aa5d2b4cfb1f7a4e4231088670eaf8.nii.gz +/annex/objects/SHA256E-s36729--389b8bc6309bd68bb33c9e7edfb6e2d7095d14e3effa62b6a2307d132ff82f08.nii.gz diff --git a/derivatives/labels/sub-brnoUhb04/anat/sub-brnoUhb04_space-other_T1w_label-discs_dlabel.json b/derivatives/labels/sub-brnoUhb04/anat/sub-brnoUhb04_T1w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-brnoUhb04/anat/sub-brnoUhb04_space-other_T1w_label-discs_dlabel.json rename to derivatives/labels/sub-brnoUhb04/anat/sub-brnoUhb04_T1w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-brnoUhb04/anat/sub-brnoUhb04_space-other_T1w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-brnoUhb04/anat/sub-brnoUhb04_T1w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-brnoUhb04/anat/sub-brnoUhb04_space-other_T1w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-brnoUhb04/anat/sub-brnoUhb04_T1w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-brnoUhb04/anat/sub-brnoUhb04_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-brnoUhb04/anat/sub-brnoUhb04_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-brnoUhb04/anat/sub-brnoUhb04_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-brnoUhb04/anat/sub-brnoUhb04_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-brnoUhb04/anat/sub-brnoUhb04_T2star_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-brnoUhb04/anat/sub-brnoUhb04_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-brnoUhb04/anat/sub-brnoUhb04_T2star_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-brnoUhb04/anat/sub-brnoUhb04_space-other_T2w_label-discs_dlabel.json b/derivatives/labels/sub-brnoUhb04/anat/sub-brnoUhb04_T2w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-brnoUhb04/anat/sub-brnoUhb04_space-other_T2w_label-discs_dlabel.json rename to derivatives/labels/sub-brnoUhb04/anat/sub-brnoUhb04_T2w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-brnoUhb04/anat/sub-brnoUhb04_space-other_T2w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-brnoUhb04/anat/sub-brnoUhb04_T2w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-brnoUhb04/anat/sub-brnoUhb04_space-other_T2w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-brnoUhb04/anat/sub-brnoUhb04_T2w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-brnoUhb04/anat/sub-brnoUhb04_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-brnoUhb04/anat/sub-brnoUhb04_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-brnoUhb04/anat/sub-brnoUhb04_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-brnoUhb04/anat/sub-brnoUhb04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-brnoUhb04/anat/sub-brnoUhb04_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-brnoUhb04/anat/sub-brnoUhb04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-brnoUhb04/anat/sub-brnoUhb04_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-brnoUhb04/anat/sub-brnoUhb04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-brnoUhb04/anat/sub-brnoUhb04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-brnoUhb04/anat/sub-brnoUhb04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-brnoUhb04/anat/sub-brnoUhb04_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-brnoUhb04/anat/sub-brnoUhb04_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-brnoUhb04/anat/sub-brnoUhb04_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-brnoUhb04/anat/sub-brnoUhb04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-brnoUhb04/anat/sub-brnoUhb04_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-brnoUhb04/anat/sub-brnoUhb04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-brnoUhb04/anat/sub-brnoUhb04_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-brnoUhb04/anat/sub-brnoUhb04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-brnoUhb04/anat/sub-brnoUhb04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-brnoUhb04/anat/sub-brnoUhb04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-brnoUhb04/anat/sub-brnoUhb04_space-other_T2star_label-SC_seg.nii.gz b/derivatives/labels/sub-brnoUhb04/anat/sub-brnoUhb04_space-other_T2star_label-SC_seg.nii.gz index 0ab3b3e75e..0de80b4a72 100644 --- a/derivatives/labels/sub-brnoUhb04/anat/sub-brnoUhb04_space-other_T2star_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-brnoUhb04/anat/sub-brnoUhb04_space-other_T2star_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s19208--d0f7cf5b9152dc44372a13018390cbb55fdddc658aa03b52715c83963fe83cec.nii.gz +/annex/objects/SHA256E-s19229--10d6a4aafb2ed5947d9573bf33580ed20d877975f41e3e2a6dea694b4d43e1ed.nii.gz diff --git a/derivatives/labels/sub-brnoUhb04/anat/sub-brnoUhb04_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-brnoUhb04/anat/sub-brnoUhb04_space-other_T2star_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-brnoUhb04/anat/sub-brnoUhb04_space-other_T2star_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-brnoUhb05/anat/sub-brnoUhb05_space-other_T1w_label-discs_dlabel.json b/derivatives/labels/sub-brnoUhb05/anat/sub-brnoUhb05_T1w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-brnoUhb05/anat/sub-brnoUhb05_space-other_T1w_label-discs_dlabel.json rename to derivatives/labels/sub-brnoUhb05/anat/sub-brnoUhb05_T1w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-brnoUhb05/anat/sub-brnoUhb05_space-other_T1w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-brnoUhb05/anat/sub-brnoUhb05_T1w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-brnoUhb05/anat/sub-brnoUhb05_space-other_T1w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-brnoUhb05/anat/sub-brnoUhb05_T1w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-brnoUhb05/anat/sub-brnoUhb05_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-brnoUhb05/anat/sub-brnoUhb05_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-brnoUhb05/anat/sub-brnoUhb05_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-brnoUhb05/anat/sub-brnoUhb05_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-brnoUhb05/anat/sub-brnoUhb05_T2star_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-brnoUhb05/anat/sub-brnoUhb05_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-brnoUhb05/anat/sub-brnoUhb05_T2star_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-brnoUhb05/anat/sub-brnoUhb05_space-other_T2w_label-discs_dlabel.json b/derivatives/labels/sub-brnoUhb05/anat/sub-brnoUhb05_T2w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-brnoUhb05/anat/sub-brnoUhb05_space-other_T2w_label-discs_dlabel.json rename to derivatives/labels/sub-brnoUhb05/anat/sub-brnoUhb05_T2w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-brnoUhb05/anat/sub-brnoUhb05_space-other_T2w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-brnoUhb05/anat/sub-brnoUhb05_T2w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-brnoUhb05/anat/sub-brnoUhb05_space-other_T2w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-brnoUhb05/anat/sub-brnoUhb05_T2w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-brnoUhb05/anat/sub-brnoUhb05_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-brnoUhb05/anat/sub-brnoUhb05_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-brnoUhb05/anat/sub-brnoUhb05_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-brnoUhb05/anat/sub-brnoUhb05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-brnoUhb05/anat/sub-brnoUhb05_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-brnoUhb05/anat/sub-brnoUhb05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-brnoUhb05/anat/sub-brnoUhb05_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-brnoUhb05/anat/sub-brnoUhb05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-brnoUhb05/anat/sub-brnoUhb05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-brnoUhb05/anat/sub-brnoUhb05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-brnoUhb05/anat/sub-brnoUhb05_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-brnoUhb05/anat/sub-brnoUhb05_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-brnoUhb05/anat/sub-brnoUhb05_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-brnoUhb05/anat/sub-brnoUhb05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-brnoUhb05/anat/sub-brnoUhb05_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-brnoUhb05/anat/sub-brnoUhb05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-brnoUhb05/anat/sub-brnoUhb05_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-brnoUhb05/anat/sub-brnoUhb05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-brnoUhb05/anat/sub-brnoUhb05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-brnoUhb05/anat/sub-brnoUhb05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-brnoUhb05/anat/sub-brnoUhb05_space-other_T2star_label-SC_seg.nii.gz b/derivatives/labels/sub-brnoUhb05/anat/sub-brnoUhb05_space-other_T2star_label-SC_seg.nii.gz index cdf385da2c..731f8a0939 100644 --- a/derivatives/labels/sub-brnoUhb05/anat/sub-brnoUhb05_space-other_T2star_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-brnoUhb05/anat/sub-brnoUhb05_space-other_T2star_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s8720--3e48455e0b301980b397927879db8c097b1effa8c11088b90d4f9bd16c932563.nii.gz +/annex/objects/SHA256E-s36709--207c18fa0cf4d4da961bf8f0e9740e1cba52420da57b73827899190104317d68.nii.gz diff --git a/derivatives/labels/sub-brnoUhb05/anat/sub-brnoUhb05_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-brnoUhb05/anat/sub-brnoUhb05_space-other_T2star_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-brnoUhb05/anat/sub-brnoUhb05_space-other_T2star_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-brnoUhb06/anat/sub-brnoUhb06_space-other_T1w_label-discs_dlabel.json b/derivatives/labels/sub-brnoUhb06/anat/sub-brnoUhb06_T1w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-brnoUhb06/anat/sub-brnoUhb06_space-other_T1w_label-discs_dlabel.json rename to derivatives/labels/sub-brnoUhb06/anat/sub-brnoUhb06_T1w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-brnoUhb06/anat/sub-brnoUhb06_space-other_T1w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-brnoUhb06/anat/sub-brnoUhb06_T1w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-brnoUhb06/anat/sub-brnoUhb06_space-other_T1w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-brnoUhb06/anat/sub-brnoUhb06_T1w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-brnoUhb06/anat/sub-brnoUhb06_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-brnoUhb06/anat/sub-brnoUhb06_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-brnoUhb06/anat/sub-brnoUhb06_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-brnoUhb06/anat/sub-brnoUhb06_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-brnoUhb06/anat/sub-brnoUhb06_T2star_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-brnoUhb06/anat/sub-brnoUhb06_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-brnoUhb06/anat/sub-brnoUhb06_T2star_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-brnoUhb06/anat/sub-brnoUhb06_space-other_T2w_label-discs_dlabel.json b/derivatives/labels/sub-brnoUhb06/anat/sub-brnoUhb06_T2w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-brnoUhb06/anat/sub-brnoUhb06_space-other_T2w_label-discs_dlabel.json rename to derivatives/labels/sub-brnoUhb06/anat/sub-brnoUhb06_T2w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-brnoUhb06/anat/sub-brnoUhb06_space-other_T2w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-brnoUhb06/anat/sub-brnoUhb06_T2w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-brnoUhb06/anat/sub-brnoUhb06_space-other_T2w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-brnoUhb06/anat/sub-brnoUhb06_T2w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-brnoUhb06/anat/sub-brnoUhb06_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-brnoUhb06/anat/sub-brnoUhb06_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-brnoUhb06/anat/sub-brnoUhb06_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-brnoUhb06/anat/sub-brnoUhb06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-brnoUhb06/anat/sub-brnoUhb06_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-brnoUhb06/anat/sub-brnoUhb06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-brnoUhb06/anat/sub-brnoUhb06_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-brnoUhb06/anat/sub-brnoUhb06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-brnoUhb06/anat/sub-brnoUhb06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-brnoUhb06/anat/sub-brnoUhb06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-brnoUhb06/anat/sub-brnoUhb06_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-brnoUhb06/anat/sub-brnoUhb06_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-brnoUhb06/anat/sub-brnoUhb06_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-brnoUhb06/anat/sub-brnoUhb06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-brnoUhb06/anat/sub-brnoUhb06_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-brnoUhb06/anat/sub-brnoUhb06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-brnoUhb06/anat/sub-brnoUhb06_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-brnoUhb06/anat/sub-brnoUhb06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-brnoUhb06/anat/sub-brnoUhb06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-brnoUhb06/anat/sub-brnoUhb06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-brnoUhb06/anat/sub-brnoUhb06_space-other_T2star_label-SC_seg.nii.gz b/derivatives/labels/sub-brnoUhb06/anat/sub-brnoUhb06_space-other_T2star_label-SC_seg.nii.gz index b665a46539..e605254462 100644 --- a/derivatives/labels/sub-brnoUhb06/anat/sub-brnoUhb06_space-other_T2star_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-brnoUhb06/anat/sub-brnoUhb06_space-other_T2star_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s8694--36b1d66f028ddf67a8b5b077e7292f6a9b0602992920e9bd4765105872c75814.nii.gz +/annex/objects/SHA256E-s36656--9595412a4a4c9306b1b54f2fbef62a60c6d8ac78359cc5a89d8d6c352144e073.nii.gz diff --git a/derivatives/labels/sub-brnoUhb06/anat/sub-brnoUhb06_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-brnoUhb06/anat/sub-brnoUhb06_space-other_T2star_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-brnoUhb06/anat/sub-brnoUhb06_space-other_T2star_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-brnoUhb07/anat/sub-brnoUhb07_space-other_T1w_label-discs_dlabel.json b/derivatives/labels/sub-brnoUhb07/anat/sub-brnoUhb07_T1w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-brnoUhb07/anat/sub-brnoUhb07_space-other_T1w_label-discs_dlabel.json rename to derivatives/labels/sub-brnoUhb07/anat/sub-brnoUhb07_T1w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-brnoUhb07/anat/sub-brnoUhb07_space-other_T1w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-brnoUhb07/anat/sub-brnoUhb07_T1w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-brnoUhb07/anat/sub-brnoUhb07_space-other_T1w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-brnoUhb07/anat/sub-brnoUhb07_T1w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-brnoUhb07/anat/sub-brnoUhb07_space-other_T2w_label-discs_dlabel.json b/derivatives/labels/sub-brnoUhb07/anat/sub-brnoUhb07_T2w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-brnoUhb07/anat/sub-brnoUhb07_space-other_T2w_label-discs_dlabel.json rename to derivatives/labels/sub-brnoUhb07/anat/sub-brnoUhb07_T2w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-brnoUhb07/anat/sub-brnoUhb07_space-other_T2w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-brnoUhb07/anat/sub-brnoUhb07_T2w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-brnoUhb07/anat/sub-brnoUhb07_space-other_T2w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-brnoUhb07/anat/sub-brnoUhb07_T2w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-brnoUhb07/anat/sub-brnoUhb07_space-other_T2star_label-SC_seg.nii.gz b/derivatives/labels/sub-brnoUhb07/anat/sub-brnoUhb07_space-other_T2star_label-SC_seg.nii.gz index ebea0b7568..8b02378331 100644 --- a/derivatives/labels/sub-brnoUhb07/anat/sub-brnoUhb07_space-other_T2star_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-brnoUhb07/anat/sub-brnoUhb07_space-other_T2star_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s8679--d3f44adaa829c2c1f20157f7c8868cabf72533ed798a1f63552439554e40c373.nii.gz +/annex/objects/SHA256E-s36662--2d1d599677d6ab7719e3f25c614330fe12e45ddb7e2f964e70fb2f7721243d6e.nii.gz diff --git a/derivatives/labels/sub-brnoUhb08/anat/sub-brnoUhb08_space-other_T1w_label-discs_dlabel.json b/derivatives/labels/sub-brnoUhb08/anat/sub-brnoUhb08_T1w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-brnoUhb08/anat/sub-brnoUhb08_space-other_T1w_label-discs_dlabel.json rename to derivatives/labels/sub-brnoUhb08/anat/sub-brnoUhb08_T1w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-brnoUhb08/anat/sub-brnoUhb08_space-other_T1w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-brnoUhb08/anat/sub-brnoUhb08_T1w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-brnoUhb08/anat/sub-brnoUhb08_space-other_T1w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-brnoUhb08/anat/sub-brnoUhb08_T1w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-brnoUhb08/anat/sub-brnoUhb08_space-other_T2w_label-discs_dlabel.json b/derivatives/labels/sub-brnoUhb08/anat/sub-brnoUhb08_T2w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-brnoUhb08/anat/sub-brnoUhb08_space-other_T2w_label-discs_dlabel.json rename to derivatives/labels/sub-brnoUhb08/anat/sub-brnoUhb08_T2w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-brnoUhb08/anat/sub-brnoUhb08_space-other_T2w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-brnoUhb08/anat/sub-brnoUhb08_T2w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-brnoUhb08/anat/sub-brnoUhb08_space-other_T2w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-brnoUhb08/anat/sub-brnoUhb08_T2w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-brnoUhb08/anat/sub-brnoUhb08_space-other_T1w_RPI_r_labels-manual.json b/derivatives/labels/sub-brnoUhb08/anat/sub-brnoUhb08_space-other_T1w_RPI_r_labels-manual.json deleted file mode 100644 index 5775af959d..0000000000 --- a/derivatives/labels/sub-brnoUhb08/anat/sub-brnoUhb08_space-other_T1w_RPI_r_labels-manual.json +++ /dev/null @@ -1,4 +0,0 @@ -{ - "Author": "Paul Bautin", - "Date": "2020-07-30 11:57:54" -} \ No newline at end of file diff --git a/derivatives/labels/sub-brnoUhb08/anat/sub-brnoUhb08_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.json b/derivatives/labels/sub-brnoUhb08/anat/sub-brnoUhb08_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.json new file mode 100644 index 0000000000..45ecc00e36 --- /dev/null +++ b/derivatives/labels/sub-brnoUhb08/anat/sub-brnoUhb08_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.json @@ -0,0 +1,13 @@ +{ + "SpatialReference": { + "Orientation": "RPI", + "Resampling": "1x1x1" + }, + "GeneratedBy": [ + { + "Author": "Paul Bautin", + "Date": "2020-07-30 11:57:54", + "Description": "Manual label of C2 and C5 mid-vertebrae, at the center of the spinal cord." + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-brnoUhb08/anat/sub-brnoUhb08_space-other_T1w_RPI_r_labels-manual.nii.gz b/derivatives/labels/sub-brnoUhb08/anat/sub-brnoUhb08_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-brnoUhb08/anat/sub-brnoUhb08_space-other_T1w_RPI_r_labels-manual.nii.gz rename to derivatives/labels/sub-brnoUhb08/anat/sub-brnoUhb08_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.nii.gz diff --git a/derivatives/labels/sub-brnoUhb08/anat/sub-brnoUhb08_space-other_T2star_label-SC_seg.nii.gz b/derivatives/labels/sub-brnoUhb08/anat/sub-brnoUhb08_space-other_T2star_label-SC_seg.nii.gz index 2f6dda9838..c1660214d0 100644 --- a/derivatives/labels/sub-brnoUhb08/anat/sub-brnoUhb08_space-other_T2star_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-brnoUhb08/anat/sub-brnoUhb08_space-other_T2star_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s19394--c5f313d767253f2093ddb73b263fcfff518fac4b049291374c6d258c4c57978d.nii.gz +/annex/objects/SHA256E-s19415--0956821dd9868fbc223bd594cdf9ec68bbb80bac6d44d092f1e53445f0745354.nii.gz diff --git a/derivatives/labels/sub-cardiff01/anat/sub-cardiff01_space-other_T1w_label-discs_dlabel.json b/derivatives/labels/sub-cardiff01/anat/sub-cardiff01_T1w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-cardiff01/anat/sub-cardiff01_space-other_T1w_label-discs_dlabel.json rename to derivatives/labels/sub-cardiff01/anat/sub-cardiff01_T1w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-cardiff01/anat/sub-cardiff01_space-other_T1w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-cardiff01/anat/sub-cardiff01_T1w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-cardiff01/anat/sub-cardiff01_space-other_T1w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-cardiff01/anat/sub-cardiff01_T1w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-cardiff01/anat/sub-cardiff01_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-cardiff01/anat/sub-cardiff01_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-cardiff01/anat/sub-cardiff01_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-cardiff01/anat/sub-cardiff01_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-cardiff01/anat/sub-cardiff01_T2star_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-cardiff01/anat/sub-cardiff01_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-cardiff01/anat/sub-cardiff01_T2star_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-cardiff01/anat/sub-cardiff01_space-other_T2w_label-discs_dlabel.json b/derivatives/labels/sub-cardiff01/anat/sub-cardiff01_T2w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-cardiff01/anat/sub-cardiff01_space-other_T2w_label-discs_dlabel.json rename to derivatives/labels/sub-cardiff01/anat/sub-cardiff01_T2w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-cardiff01/anat/sub-cardiff01_space-other_T2w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-cardiff01/anat/sub-cardiff01_T2w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-cardiff01/anat/sub-cardiff01_space-other_T2w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-cardiff01/anat/sub-cardiff01_T2w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-cardiff01/anat/sub-cardiff01_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-cardiff01/anat/sub-cardiff01_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-cardiff01/anat/sub-cardiff01_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-cardiff01/anat/sub-cardiff01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-cardiff01/anat/sub-cardiff01_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-cardiff01/anat/sub-cardiff01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-cardiff01/anat/sub-cardiff01_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-cardiff01/anat/sub-cardiff01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-cardiff01/anat/sub-cardiff01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-cardiff01/anat/sub-cardiff01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-cardiff01/anat/sub-cardiff01_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-cardiff01/anat/sub-cardiff01_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-cardiff01/anat/sub-cardiff01_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-cardiff01/anat/sub-cardiff01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-cardiff01/anat/sub-cardiff01_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-cardiff01/anat/sub-cardiff01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-cardiff01/anat/sub-cardiff01_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-cardiff01/anat/sub-cardiff01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-cardiff01/anat/sub-cardiff01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-cardiff01/anat/sub-cardiff01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-cardiff01/anat/sub-cardiff01_space-other_T2star_label-SC_seg.nii.gz b/derivatives/labels/sub-cardiff01/anat/sub-cardiff01_space-other_T2star_label-SC_seg.nii.gz index d2123a68c6..799f76d4fd 100644 --- a/derivatives/labels/sub-cardiff01/anat/sub-cardiff01_space-other_T2star_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-cardiff01/anat/sub-cardiff01_space-other_T2star_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s15084--d02a20f7e655b500071e64820fdc8be4f1eba5b5fbb6f6988abe64232743aaee.nii.gz +/annex/objects/SHA256E-s15105--0657da0d313f51740ed07efbd6cb8dac6c71bccbc30ee94a1449934d97af6f11.nii.gz diff --git a/derivatives/labels/sub-cardiff01/anat/sub-cardiff01_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-cardiff01/anat/sub-cardiff01_space-other_T2star_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-cardiff01/anat/sub-cardiff01_space-other_T2star_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-cardiff02/anat/sub-cardiff02_space-other_T1w_label-discs_dlabel.json b/derivatives/labels/sub-cardiff02/anat/sub-cardiff02_T1w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-cardiff02/anat/sub-cardiff02_space-other_T1w_label-discs_dlabel.json rename to derivatives/labels/sub-cardiff02/anat/sub-cardiff02_T1w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-cardiff02/anat/sub-cardiff02_space-other_T1w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-cardiff02/anat/sub-cardiff02_T1w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-cardiff02/anat/sub-cardiff02_space-other_T1w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-cardiff02/anat/sub-cardiff02_T1w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-cardiff02/anat/sub-cardiff02_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-cardiff02/anat/sub-cardiff02_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-cardiff02/anat/sub-cardiff02_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-cardiff02/anat/sub-cardiff02_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-cardiff02/anat/sub-cardiff02_T2star_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-cardiff02/anat/sub-cardiff02_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-cardiff02/anat/sub-cardiff02_T2star_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-cardiff02/anat/sub-cardiff02_space-other_T2w_label-discs_dlabel.json b/derivatives/labels/sub-cardiff02/anat/sub-cardiff02_T2w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-cardiff02/anat/sub-cardiff02_space-other_T2w_label-discs_dlabel.json rename to derivatives/labels/sub-cardiff02/anat/sub-cardiff02_T2w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-cardiff02/anat/sub-cardiff02_space-other_T2w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-cardiff02/anat/sub-cardiff02_T2w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-cardiff02/anat/sub-cardiff02_space-other_T2w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-cardiff02/anat/sub-cardiff02_T2w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-cardiff02/anat/sub-cardiff02_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-cardiff02/anat/sub-cardiff02_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-cardiff02/anat/sub-cardiff02_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-cardiff02/anat/sub-cardiff02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-cardiff02/anat/sub-cardiff02_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-cardiff02/anat/sub-cardiff02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-cardiff02/anat/sub-cardiff02_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-cardiff02/anat/sub-cardiff02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-cardiff02/anat/sub-cardiff02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-cardiff02/anat/sub-cardiff02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-cardiff02/anat/sub-cardiff02_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-cardiff02/anat/sub-cardiff02_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-cardiff02/anat/sub-cardiff02_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-cardiff02/anat/sub-cardiff02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-cardiff02/anat/sub-cardiff02_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-cardiff02/anat/sub-cardiff02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-cardiff02/anat/sub-cardiff02_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-cardiff02/anat/sub-cardiff02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-cardiff02/anat/sub-cardiff02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-cardiff02/anat/sub-cardiff02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-cardiff02/anat/sub-cardiff02_space-other_T2star_label-SC_seg.nii.gz b/derivatives/labels/sub-cardiff02/anat/sub-cardiff02_space-other_T2star_label-SC_seg.nii.gz index 5be95dca99..b4562b0b26 100644 --- a/derivatives/labels/sub-cardiff02/anat/sub-cardiff02_space-other_T2star_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-cardiff02/anat/sub-cardiff02_space-other_T2star_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s14998--68148b66cf93c2155e7e8bdd862e42f2860cd41cee93b5faa8fa14e99afa7824.nii.gz +/annex/objects/SHA256E-s15019--c4cf96f5f6bd7bc70491218ce21d12faf44a8e9ecc605d3c70fd3160b94b6e54.nii.gz diff --git a/derivatives/labels/sub-cardiff02/anat/sub-cardiff02_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-cardiff02/anat/sub-cardiff02_space-other_T2star_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-cardiff02/anat/sub-cardiff02_space-other_T2star_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-cardiff03/anat/sub-cardiff03_space-other_T1w_label-discs_dlabel.json b/derivatives/labels/sub-cardiff03/anat/sub-cardiff03_T1w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-cardiff03/anat/sub-cardiff03_space-other_T1w_label-discs_dlabel.json rename to derivatives/labels/sub-cardiff03/anat/sub-cardiff03_T1w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-cardiff03/anat/sub-cardiff03_space-other_T1w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-cardiff03/anat/sub-cardiff03_T1w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-cardiff03/anat/sub-cardiff03_space-other_T1w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-cardiff03/anat/sub-cardiff03_T1w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-cardiff03/anat/sub-cardiff03_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-cardiff03/anat/sub-cardiff03_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-cardiff03/anat/sub-cardiff03_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-cardiff03/anat/sub-cardiff03_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-cardiff03/anat/sub-cardiff03_T2star_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-cardiff03/anat/sub-cardiff03_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-cardiff03/anat/sub-cardiff03_T2star_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-cardiff03/anat/sub-cardiff03_space-other_T2w_label-discs_dlabel.json b/derivatives/labels/sub-cardiff03/anat/sub-cardiff03_T2w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-cardiff03/anat/sub-cardiff03_space-other_T2w_label-discs_dlabel.json rename to derivatives/labels/sub-cardiff03/anat/sub-cardiff03_T2w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-cardiff03/anat/sub-cardiff03_space-other_T2w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-cardiff03/anat/sub-cardiff03_T2w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-cardiff03/anat/sub-cardiff03_space-other_T2w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-cardiff03/anat/sub-cardiff03_T2w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-cardiff03/anat/sub-cardiff03_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-cardiff03/anat/sub-cardiff03_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-cardiff03/anat/sub-cardiff03_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-cardiff03/anat/sub-cardiff03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-cardiff03/anat/sub-cardiff03_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-cardiff03/anat/sub-cardiff03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-cardiff03/anat/sub-cardiff03_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-cardiff03/anat/sub-cardiff03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-cardiff03/anat/sub-cardiff03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-cardiff03/anat/sub-cardiff03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-cardiff03/anat/sub-cardiff03_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-cardiff03/anat/sub-cardiff03_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-cardiff03/anat/sub-cardiff03_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-cardiff03/anat/sub-cardiff03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-cardiff03/anat/sub-cardiff03_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-cardiff03/anat/sub-cardiff03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-cardiff03/anat/sub-cardiff03_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-cardiff03/anat/sub-cardiff03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-cardiff03/anat/sub-cardiff03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-cardiff03/anat/sub-cardiff03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-cardiff03/anat/sub-cardiff03_space-other_T2star_label-SC_seg.nii.gz b/derivatives/labels/sub-cardiff03/anat/sub-cardiff03_space-other_T2star_label-SC_seg.nii.gz index b7e60c2c3f..509077706e 100644 --- a/derivatives/labels/sub-cardiff03/anat/sub-cardiff03_space-other_T2star_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-cardiff03/anat/sub-cardiff03_space-other_T2star_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s14901--86cf9cb539d6c605b4ba60f225d3ec2389f2073239cf221771ddee5af8817449.nii.gz +/annex/objects/SHA256E-s14922--0e6fa9e8b7b18ddf66d6351480b24053061e069f918b9eea3f6e62f32d5653bd.nii.gz diff --git a/derivatives/labels/sub-cardiff03/anat/sub-cardiff03_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-cardiff03/anat/sub-cardiff03_space-other_T2star_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-cardiff03/anat/sub-cardiff03_space-other_T2star_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-cardiff04/anat/sub-cardiff04_space-other_T1w_label-discs_dlabel.json b/derivatives/labels/sub-cardiff04/anat/sub-cardiff04_T1w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-cardiff04/anat/sub-cardiff04_space-other_T1w_label-discs_dlabel.json rename to derivatives/labels/sub-cardiff04/anat/sub-cardiff04_T1w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-cardiff04/anat/sub-cardiff04_space-other_T1w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-cardiff04/anat/sub-cardiff04_T1w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-cardiff04/anat/sub-cardiff04_space-other_T1w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-cardiff04/anat/sub-cardiff04_T1w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-cardiff04/anat/sub-cardiff04_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-cardiff04/anat/sub-cardiff04_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-cardiff04/anat/sub-cardiff04_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-cardiff04/anat/sub-cardiff04_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-cardiff04/anat/sub-cardiff04_T2star_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-cardiff04/anat/sub-cardiff04_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-cardiff04/anat/sub-cardiff04_T2star_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-cardiff04/anat/sub-cardiff04_space-other_T2w_label-discs_dlabel.json b/derivatives/labels/sub-cardiff04/anat/sub-cardiff04_T2w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-cardiff04/anat/sub-cardiff04_space-other_T2w_label-discs_dlabel.json rename to derivatives/labels/sub-cardiff04/anat/sub-cardiff04_T2w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-cardiff04/anat/sub-cardiff04_space-other_T2w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-cardiff04/anat/sub-cardiff04_T2w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-cardiff04/anat/sub-cardiff04_space-other_T2w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-cardiff04/anat/sub-cardiff04_T2w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-cardiff04/anat/sub-cardiff04_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-cardiff04/anat/sub-cardiff04_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-cardiff04/anat/sub-cardiff04_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-cardiff04/anat/sub-cardiff04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-cardiff04/anat/sub-cardiff04_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-cardiff04/anat/sub-cardiff04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-cardiff04/anat/sub-cardiff04_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-cardiff04/anat/sub-cardiff04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-cardiff04/anat/sub-cardiff04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-cardiff04/anat/sub-cardiff04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-cardiff04/anat/sub-cardiff04_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-cardiff04/anat/sub-cardiff04_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-cardiff04/anat/sub-cardiff04_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-cardiff04/anat/sub-cardiff04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-cardiff04/anat/sub-cardiff04_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-cardiff04/anat/sub-cardiff04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-cardiff04/anat/sub-cardiff04_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-cardiff04/anat/sub-cardiff04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-cardiff04/anat/sub-cardiff04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-cardiff04/anat/sub-cardiff04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-cardiff04/anat/sub-cardiff04_space-other_T2star_label-SC_seg.nii.gz b/derivatives/labels/sub-cardiff04/anat/sub-cardiff04_space-other_T2star_label-SC_seg.nii.gz index ddb9d90eac..b5ca6af9c3 100644 --- a/derivatives/labels/sub-cardiff04/anat/sub-cardiff04_space-other_T2star_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-cardiff04/anat/sub-cardiff04_space-other_T2star_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s14896--cef36c0cba18da73e371346efa9deb9ba32df75de265ee9f1c4d0d07129ac30e.nii.gz +/annex/objects/SHA256E-s14917--1775855e0067415450dca1f5943658ab2d64894f8e9f0eb994df7b5afab2b225.nii.gz diff --git a/derivatives/labels/sub-cardiff04/anat/sub-cardiff04_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-cardiff04/anat/sub-cardiff04_space-other_T2star_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-cardiff04/anat/sub-cardiff04_space-other_T2star_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-cardiff05/anat/sub-cardiff05_space-other_T1w_label-discs_dlabel.json b/derivatives/labels/sub-cardiff05/anat/sub-cardiff05_T1w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-cardiff05/anat/sub-cardiff05_space-other_T1w_label-discs_dlabel.json rename to derivatives/labels/sub-cardiff05/anat/sub-cardiff05_T1w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-cardiff05/anat/sub-cardiff05_space-other_T1w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-cardiff05/anat/sub-cardiff05_T1w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-cardiff05/anat/sub-cardiff05_space-other_T1w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-cardiff05/anat/sub-cardiff05_T1w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-cardiff05/anat/sub-cardiff05_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-cardiff05/anat/sub-cardiff05_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-cardiff05/anat/sub-cardiff05_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-cardiff05/anat/sub-cardiff05_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-cardiff05/anat/sub-cardiff05_T2star_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-cardiff05/anat/sub-cardiff05_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-cardiff05/anat/sub-cardiff05_T2star_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-cardiff05/anat/sub-cardiff05_space-other_T2w_label-discs_dlabel.json b/derivatives/labels/sub-cardiff05/anat/sub-cardiff05_T2w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-cardiff05/anat/sub-cardiff05_space-other_T2w_label-discs_dlabel.json rename to derivatives/labels/sub-cardiff05/anat/sub-cardiff05_T2w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-cardiff05/anat/sub-cardiff05_space-other_T2w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-cardiff05/anat/sub-cardiff05_T2w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-cardiff05/anat/sub-cardiff05_space-other_T2w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-cardiff05/anat/sub-cardiff05_T2w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-cardiff05/anat/sub-cardiff05_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-cardiff05/anat/sub-cardiff05_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-cardiff05/anat/sub-cardiff05_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-cardiff05/anat/sub-cardiff05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-cardiff05/anat/sub-cardiff05_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-cardiff05/anat/sub-cardiff05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-cardiff05/anat/sub-cardiff05_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-cardiff05/anat/sub-cardiff05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-cardiff05/anat/sub-cardiff05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-cardiff05/anat/sub-cardiff05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-cardiff05/anat/sub-cardiff05_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-cardiff05/anat/sub-cardiff05_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-cardiff05/anat/sub-cardiff05_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-cardiff05/anat/sub-cardiff05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-cardiff05/anat/sub-cardiff05_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-cardiff05/anat/sub-cardiff05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-cardiff05/anat/sub-cardiff05_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-cardiff05/anat/sub-cardiff05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-cardiff05/anat/sub-cardiff05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-cardiff05/anat/sub-cardiff05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-cardiff05/anat/sub-cardiff05_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.json b/derivatives/labels/sub-cardiff05/anat/sub-cardiff05_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.json new file mode 100644 index 0000000000..e537a137e5 --- /dev/null +++ b/derivatives/labels/sub-cardiff05/anat/sub-cardiff05_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.json @@ -0,0 +1,11 @@ +{ + "SpatialReference": { + "Orientation": "RPI", + "Resampling": "1x1x1" + }, + "GeneratedBy": [ + { + "Description": "Manual label of C2 and C5 mid-vertebrae, at the center of the spinal cord." + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-cardiff05/anat/sub-cardiff05_space-other_T1w_RPI_r_labels-manual.nii.gz b/derivatives/labels/sub-cardiff05/anat/sub-cardiff05_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-cardiff05/anat/sub-cardiff05_space-other_T1w_RPI_r_labels-manual.nii.gz rename to derivatives/labels/sub-cardiff05/anat/sub-cardiff05_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.nii.gz diff --git a/derivatives/labels/sub-cardiff05/anat/sub-cardiff05_space-other_T2star_label-SC_seg.nii.gz b/derivatives/labels/sub-cardiff05/anat/sub-cardiff05_space-other_T2star_label-SC_seg.nii.gz index 228239be95..73ad5f865d 100644 --- a/derivatives/labels/sub-cardiff05/anat/sub-cardiff05_space-other_T2star_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-cardiff05/anat/sub-cardiff05_space-other_T2star_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s14774--9ad5e07b7c7ebd1c1ca3fb257e1f7895d9bc30ec45738d124c30fe998ca7bb9f.nii.gz +/annex/objects/SHA256E-s14795--1db9086872e926866db330639fc067cc8f70a00b7d3938ad10721c34ee5214ac.nii.gz diff --git a/derivatives/labels/sub-cardiff05/anat/sub-cardiff05_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-cardiff05/anat/sub-cardiff05_space-other_T2star_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-cardiff05/anat/sub-cardiff05_space-other_T2star_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-cardiff06/anat/sub-cardiff06_space-other_T1w_label-discs_dlabel.json b/derivatives/labels/sub-cardiff06/anat/sub-cardiff06_T1w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-cardiff06/anat/sub-cardiff06_space-other_T1w_label-discs_dlabel.json rename to derivatives/labels/sub-cardiff06/anat/sub-cardiff06_T1w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-cardiff06/anat/sub-cardiff06_space-other_T1w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-cardiff06/anat/sub-cardiff06_T1w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-cardiff06/anat/sub-cardiff06_space-other_T1w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-cardiff06/anat/sub-cardiff06_T1w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-cardiff06/anat/sub-cardiff06_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-cardiff06/anat/sub-cardiff06_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-cardiff06/anat/sub-cardiff06_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-cardiff06/anat/sub-cardiff06_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-cardiff06/anat/sub-cardiff06_T2star_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-cardiff06/anat/sub-cardiff06_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-cardiff06/anat/sub-cardiff06_T2star_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-cardiff06/anat/sub-cardiff06_space-other_T2w_label-discs_dlabel.json b/derivatives/labels/sub-cardiff06/anat/sub-cardiff06_T2w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-cardiff06/anat/sub-cardiff06_space-other_T2w_label-discs_dlabel.json rename to derivatives/labels/sub-cardiff06/anat/sub-cardiff06_T2w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-cardiff06/anat/sub-cardiff06_space-other_T2w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-cardiff06/anat/sub-cardiff06_T2w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-cardiff06/anat/sub-cardiff06_space-other_T2w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-cardiff06/anat/sub-cardiff06_T2w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-cardiff06/anat/sub-cardiff06_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-cardiff06/anat/sub-cardiff06_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-cardiff06/anat/sub-cardiff06_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-cardiff06/anat/sub-cardiff06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-cardiff06/anat/sub-cardiff06_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-cardiff06/anat/sub-cardiff06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-cardiff06/anat/sub-cardiff06_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-cardiff06/anat/sub-cardiff06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-cardiff06/anat/sub-cardiff06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-cardiff06/anat/sub-cardiff06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-cardiff06/anat/sub-cardiff06_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-cardiff06/anat/sub-cardiff06_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-cardiff06/anat/sub-cardiff06_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-cardiff06/anat/sub-cardiff06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-cardiff06/anat/sub-cardiff06_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-cardiff06/anat/sub-cardiff06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-cardiff06/anat/sub-cardiff06_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-cardiff06/anat/sub-cardiff06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-cardiff06/anat/sub-cardiff06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-cardiff06/anat/sub-cardiff06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-cardiff06/anat/sub-cardiff06_space-other_T2star_label-SC_seg.nii.gz b/derivatives/labels/sub-cardiff06/anat/sub-cardiff06_space-other_T2star_label-SC_seg.nii.gz index 388639db6a..9e8330e2ec 100644 --- a/derivatives/labels/sub-cardiff06/anat/sub-cardiff06_space-other_T2star_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-cardiff06/anat/sub-cardiff06_space-other_T2star_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s14810--01f368c92a52bc7ac0e21e8a08ebbb19ae1c97aaf539bb530254a37373b473f7.nii.gz +/annex/objects/SHA256E-s14831--7b0d5f9ca5d7060cf32d87a24b3de8527ff5a75a4a781d520c3d22e8c2a57999.nii.gz diff --git a/derivatives/labels/sub-cardiff06/anat/sub-cardiff06_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-cardiff06/anat/sub-cardiff06_space-other_T2star_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-cardiff06/anat/sub-cardiff06_space-other_T2star_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-cmrra01/anat/sub-cmrra01_space-other_T1w_label-discs_dlabel.json b/derivatives/labels/sub-cmrra01/anat/sub-cmrra01_T1w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-cmrra01/anat/sub-cmrra01_space-other_T1w_label-discs_dlabel.json rename to derivatives/labels/sub-cmrra01/anat/sub-cmrra01_T1w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-cmrra01/anat/sub-cmrra01_space-other_T1w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-cmrra01/anat/sub-cmrra01_T1w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-cmrra01/anat/sub-cmrra01_space-other_T1w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-cmrra01/anat/sub-cmrra01_T1w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-cmrra01/anat/sub-cmrra01_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-cmrra01/anat/sub-cmrra01_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-cmrra01/anat/sub-cmrra01_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-cmrra01/anat/sub-cmrra01_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-cmrra01/anat/sub-cmrra01_T2star_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-cmrra01/anat/sub-cmrra01_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-cmrra01/anat/sub-cmrra01_T2star_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-cmrra01/anat/sub-cmrra01_space-other_T2w_label-discs_dlabel.json b/derivatives/labels/sub-cmrra01/anat/sub-cmrra01_T2w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-cmrra01/anat/sub-cmrra01_space-other_T2w_label-discs_dlabel.json rename to derivatives/labels/sub-cmrra01/anat/sub-cmrra01_T2w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-cmrra01/anat/sub-cmrra01_space-other_T2w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-cmrra01/anat/sub-cmrra01_T2w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-cmrra01/anat/sub-cmrra01_space-other_T2w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-cmrra01/anat/sub-cmrra01_T2w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-cmrra01/anat/sub-cmrra01_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-cmrra01/anat/sub-cmrra01_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-cmrra01/anat/sub-cmrra01_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-cmrra01/anat/sub-cmrra01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-cmrra01/anat/sub-cmrra01_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-cmrra01/anat/sub-cmrra01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-cmrra01/anat/sub-cmrra01_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-cmrra01/anat/sub-cmrra01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-cmrra01/anat/sub-cmrra01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-cmrra01/anat/sub-cmrra01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-cmrra01/anat/sub-cmrra01_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-cmrra01/anat/sub-cmrra01_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-cmrra01/anat/sub-cmrra01_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-cmrra01/anat/sub-cmrra01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-cmrra01/anat/sub-cmrra01_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-cmrra01/anat/sub-cmrra01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-cmrra01/anat/sub-cmrra01_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-cmrra01/anat/sub-cmrra01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-cmrra01/anat/sub-cmrra01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-cmrra01/anat/sub-cmrra01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-cmrra01/anat/sub-cmrra01_space-other_T2star_label-SC_seg.nii.gz b/derivatives/labels/sub-cmrra01/anat/sub-cmrra01_space-other_T2star_label-SC_seg.nii.gz index 80e9f98e97..1443cd79f8 100644 --- a/derivatives/labels/sub-cmrra01/anat/sub-cmrra01_space-other_T2star_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-cmrra01/anat/sub-cmrra01_space-other_T2star_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s14936--0f8445b4da39c497a51212b973ef867cfefec10bef8d40bc9efdf1ea00cb198d.nii.gz +/annex/objects/SHA256E-s14957--236f3dbcb75539a790c48591be1d88dca55ae5480db46d1410643ffe6291d3eb.nii.gz diff --git a/derivatives/labels/sub-cmrra01/anat/sub-cmrra01_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-cmrra01/anat/sub-cmrra01_space-other_T2star_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-cmrra01/anat/sub-cmrra01_space-other_T2star_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-cmrra02/anat/sub-cmrra02_space-other_T1w_label-discs_dlabel.json b/derivatives/labels/sub-cmrra02/anat/sub-cmrra02_T1w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-cmrra02/anat/sub-cmrra02_space-other_T1w_label-discs_dlabel.json rename to derivatives/labels/sub-cmrra02/anat/sub-cmrra02_T1w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-cmrra02/anat/sub-cmrra02_space-other_T1w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-cmrra02/anat/sub-cmrra02_T1w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-cmrra02/anat/sub-cmrra02_space-other_T1w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-cmrra02/anat/sub-cmrra02_T1w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-cmrra02/anat/sub-cmrra02_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-cmrra02/anat/sub-cmrra02_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-cmrra02/anat/sub-cmrra02_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-cmrra02/anat/sub-cmrra02_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-cmrra02/anat/sub-cmrra02_T2star_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-cmrra02/anat/sub-cmrra02_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-cmrra02/anat/sub-cmrra02_T2star_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-cmrra02/anat/sub-cmrra02_space-other_T2w_label-discs_dlabel.json b/derivatives/labels/sub-cmrra02/anat/sub-cmrra02_T2w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-cmrra02/anat/sub-cmrra02_space-other_T2w_label-discs_dlabel.json rename to derivatives/labels/sub-cmrra02/anat/sub-cmrra02_T2w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-cmrra02/anat/sub-cmrra02_space-other_T2w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-cmrra02/anat/sub-cmrra02_T2w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-cmrra02/anat/sub-cmrra02_space-other_T2w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-cmrra02/anat/sub-cmrra02_T2w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-cmrra02/anat/sub-cmrra02_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-cmrra02/anat/sub-cmrra02_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-cmrra02/anat/sub-cmrra02_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-cmrra02/anat/sub-cmrra02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-cmrra02/anat/sub-cmrra02_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-cmrra02/anat/sub-cmrra02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-cmrra02/anat/sub-cmrra02_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-cmrra02/anat/sub-cmrra02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-cmrra02/anat/sub-cmrra02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-cmrra02/anat/sub-cmrra02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-cmrra02/anat/sub-cmrra02_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-cmrra02/anat/sub-cmrra02_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-cmrra02/anat/sub-cmrra02_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-cmrra02/anat/sub-cmrra02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-cmrra02/anat/sub-cmrra02_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-cmrra02/anat/sub-cmrra02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-cmrra02/anat/sub-cmrra02_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-cmrra02/anat/sub-cmrra02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-cmrra02/anat/sub-cmrra02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-cmrra02/anat/sub-cmrra02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-cmrra02/anat/sub-cmrra02_space-other_T2star_label-SC_seg.nii.gz b/derivatives/labels/sub-cmrra02/anat/sub-cmrra02_space-other_T2star_label-SC_seg.nii.gz index 45b39fd8f5..5f2a11850b 100644 --- a/derivatives/labels/sub-cmrra02/anat/sub-cmrra02_space-other_T2star_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-cmrra02/anat/sub-cmrra02_space-other_T2star_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s14825--52f05d83b588fff01c729cb2ecc3c26a943541e86914d42fb3d079d502c23681.nii.gz +/annex/objects/SHA256E-s14846--896c4dc0d70140e63d91ee495ca351e5f624d04693afc59e2ab30e87ba3e128f.nii.gz diff --git a/derivatives/labels/sub-cmrra02/anat/sub-cmrra02_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-cmrra02/anat/sub-cmrra02_space-other_T2star_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-cmrra02/anat/sub-cmrra02_space-other_T2star_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-cmrra03/anat/sub-cmrra03_space-other_T1w_label-discs_dlabel.json b/derivatives/labels/sub-cmrra03/anat/sub-cmrra03_T1w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-cmrra03/anat/sub-cmrra03_space-other_T1w_label-discs_dlabel.json rename to derivatives/labels/sub-cmrra03/anat/sub-cmrra03_T1w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-cmrra03/anat/sub-cmrra03_space-other_T1w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-cmrra03/anat/sub-cmrra03_T1w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-cmrra03/anat/sub-cmrra03_space-other_T1w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-cmrra03/anat/sub-cmrra03_T1w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-cmrra03/anat/sub-cmrra03_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-cmrra03/anat/sub-cmrra03_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-cmrra03/anat/sub-cmrra03_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-cmrra03/anat/sub-cmrra03_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-cmrra03/anat/sub-cmrra03_T2star_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-cmrra03/anat/sub-cmrra03_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-cmrra03/anat/sub-cmrra03_T2star_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-cmrra03/anat/sub-cmrra03_space-other_T2w_label-discs_dlabel.json b/derivatives/labels/sub-cmrra03/anat/sub-cmrra03_T2w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-cmrra03/anat/sub-cmrra03_space-other_T2w_label-discs_dlabel.json rename to derivatives/labels/sub-cmrra03/anat/sub-cmrra03_T2w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-cmrra03/anat/sub-cmrra03_space-other_T2w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-cmrra03/anat/sub-cmrra03_T2w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-cmrra03/anat/sub-cmrra03_space-other_T2w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-cmrra03/anat/sub-cmrra03_T2w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-cmrra03/anat/sub-cmrra03_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-cmrra03/anat/sub-cmrra03_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-cmrra03/anat/sub-cmrra03_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-cmrra03/anat/sub-cmrra03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-cmrra03/anat/sub-cmrra03_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-cmrra03/anat/sub-cmrra03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-cmrra03/anat/sub-cmrra03_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-cmrra03/anat/sub-cmrra03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-cmrra03/anat/sub-cmrra03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-cmrra03/anat/sub-cmrra03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-cmrra03/anat/sub-cmrra03_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-cmrra03/anat/sub-cmrra03_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-cmrra03/anat/sub-cmrra03_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-cmrra03/anat/sub-cmrra03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-cmrra03/anat/sub-cmrra03_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-cmrra03/anat/sub-cmrra03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-cmrra03/anat/sub-cmrra03_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-cmrra03/anat/sub-cmrra03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-cmrra03/anat/sub-cmrra03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-cmrra03/anat/sub-cmrra03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-cmrra03/anat/sub-cmrra03_space-other_T2star_label-SC_seg.nii.gz b/derivatives/labels/sub-cmrra03/anat/sub-cmrra03_space-other_T2star_label-SC_seg.nii.gz index 425948e6e9..e4f79efc25 100644 --- a/derivatives/labels/sub-cmrra03/anat/sub-cmrra03_space-other_T2star_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-cmrra03/anat/sub-cmrra03_space-other_T2star_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s14915--27addeace5a34b7f4fcb3466825d4fbe292b6027c8fad3a51337daba120a52a7.nii.gz +/annex/objects/SHA256E-s14936--de362a2a8053acb0e344eaa4c413574ffbdc42895425bf3cfd0378d1a3aa4525.nii.gz diff --git a/derivatives/labels/sub-cmrra03/anat/sub-cmrra03_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-cmrra03/anat/sub-cmrra03_space-other_T2star_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-cmrra03/anat/sub-cmrra03_space-other_T2star_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-cmrra04/anat/sub-cmrra04_space-other_T1w_label-discs_dlabel.json b/derivatives/labels/sub-cmrra04/anat/sub-cmrra04_T1w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-cmrra04/anat/sub-cmrra04_space-other_T1w_label-discs_dlabel.json rename to derivatives/labels/sub-cmrra04/anat/sub-cmrra04_T1w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-cmrra04/anat/sub-cmrra04_space-other_T1w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-cmrra04/anat/sub-cmrra04_T1w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-cmrra04/anat/sub-cmrra04_space-other_T1w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-cmrra04/anat/sub-cmrra04_T1w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-cmrra04/anat/sub-cmrra04_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-cmrra04/anat/sub-cmrra04_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-cmrra04/anat/sub-cmrra04_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-cmrra04/anat/sub-cmrra04_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-cmrra04/anat/sub-cmrra04_T2star_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-cmrra04/anat/sub-cmrra04_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-cmrra04/anat/sub-cmrra04_T2star_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-cmrra04/anat/sub-cmrra04_space-other_T2w_label-discs_dlabel.json b/derivatives/labels/sub-cmrra04/anat/sub-cmrra04_T2w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-cmrra04/anat/sub-cmrra04_space-other_T2w_label-discs_dlabel.json rename to derivatives/labels/sub-cmrra04/anat/sub-cmrra04_T2w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-cmrra04/anat/sub-cmrra04_space-other_T2w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-cmrra04/anat/sub-cmrra04_T2w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-cmrra04/anat/sub-cmrra04_space-other_T2w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-cmrra04/anat/sub-cmrra04_T2w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-cmrra04/anat/sub-cmrra04_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-cmrra04/anat/sub-cmrra04_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-cmrra04/anat/sub-cmrra04_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-cmrra04/anat/sub-cmrra04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-cmrra04/anat/sub-cmrra04_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-cmrra04/anat/sub-cmrra04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-cmrra04/anat/sub-cmrra04_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-cmrra04/anat/sub-cmrra04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-cmrra04/anat/sub-cmrra04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-cmrra04/anat/sub-cmrra04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-cmrra04/anat/sub-cmrra04_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-cmrra04/anat/sub-cmrra04_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-cmrra04/anat/sub-cmrra04_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-cmrra04/anat/sub-cmrra04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-cmrra04/anat/sub-cmrra04_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-cmrra04/anat/sub-cmrra04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-cmrra04/anat/sub-cmrra04_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-cmrra04/anat/sub-cmrra04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-cmrra04/anat/sub-cmrra04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-cmrra04/anat/sub-cmrra04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-cmrra04/anat/sub-cmrra04_space-other_T2star_label-SC_seg.nii.gz b/derivatives/labels/sub-cmrra04/anat/sub-cmrra04_space-other_T2star_label-SC_seg.nii.gz index 492f1e5d9d..a7db6b36f2 100644 --- a/derivatives/labels/sub-cmrra04/anat/sub-cmrra04_space-other_T2star_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-cmrra04/anat/sub-cmrra04_space-other_T2star_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s15044--e821e8ac320ee401e98c71689b98a9c88fe91716ada0c770154a21110b6d7bad.nii.gz +/annex/objects/SHA256E-s15065--a62b01340043bb0fad5f39ffc9c99e9bea9e93744710f3bbccc33ae1430242b3.nii.gz diff --git a/derivatives/labels/sub-cmrra04/anat/sub-cmrra04_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-cmrra04/anat/sub-cmrra04_space-other_T2star_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-cmrra04/anat/sub-cmrra04_space-other_T2star_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-cmrra05/anat/sub-cmrra05_space-other_T1w_label-discs_dlabel.json b/derivatives/labels/sub-cmrra05/anat/sub-cmrra05_T1w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-cmrra05/anat/sub-cmrra05_space-other_T1w_label-discs_dlabel.json rename to derivatives/labels/sub-cmrra05/anat/sub-cmrra05_T1w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-cmrra05/anat/sub-cmrra05_space-other_T1w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-cmrra05/anat/sub-cmrra05_T1w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-cmrra05/anat/sub-cmrra05_space-other_T1w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-cmrra05/anat/sub-cmrra05_T1w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-cmrra05/anat/sub-cmrra05_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-cmrra05/anat/sub-cmrra05_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-cmrra05/anat/sub-cmrra05_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-cmrra05/anat/sub-cmrra05_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-cmrra05/anat/sub-cmrra05_T2star_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-cmrra05/anat/sub-cmrra05_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-cmrra05/anat/sub-cmrra05_T2star_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-cmrra05/anat/sub-cmrra05_space-other_T2w_label-discs_dlabel.json b/derivatives/labels/sub-cmrra05/anat/sub-cmrra05_T2w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-cmrra05/anat/sub-cmrra05_space-other_T2w_label-discs_dlabel.json rename to derivatives/labels/sub-cmrra05/anat/sub-cmrra05_T2w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-cmrra05/anat/sub-cmrra05_space-other_T2w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-cmrra05/anat/sub-cmrra05_T2w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-cmrra05/anat/sub-cmrra05_space-other_T2w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-cmrra05/anat/sub-cmrra05_T2w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-cmrra05/anat/sub-cmrra05_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-cmrra05/anat/sub-cmrra05_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-cmrra05/anat/sub-cmrra05_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-cmrra05/anat/sub-cmrra05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-cmrra05/anat/sub-cmrra05_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-cmrra05/anat/sub-cmrra05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-cmrra05/anat/sub-cmrra05_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-cmrra05/anat/sub-cmrra05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-cmrra05/anat/sub-cmrra05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-cmrra05/anat/sub-cmrra05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-cmrra05/anat/sub-cmrra05_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-cmrra05/anat/sub-cmrra05_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-cmrra05/anat/sub-cmrra05_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-cmrra05/anat/sub-cmrra05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-cmrra05/anat/sub-cmrra05_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-cmrra05/anat/sub-cmrra05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-cmrra05/anat/sub-cmrra05_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-cmrra05/anat/sub-cmrra05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-cmrra05/anat/sub-cmrra05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-cmrra05/anat/sub-cmrra05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-cmrra05/anat/sub-cmrra05_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.json b/derivatives/labels/sub-cmrra05/anat/sub-cmrra05_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.json new file mode 100644 index 0000000000..e537a137e5 --- /dev/null +++ b/derivatives/labels/sub-cmrra05/anat/sub-cmrra05_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.json @@ -0,0 +1,11 @@ +{ + "SpatialReference": { + "Orientation": "RPI", + "Resampling": "1x1x1" + }, + "GeneratedBy": [ + { + "Description": "Manual label of C2 and C5 mid-vertebrae, at the center of the spinal cord." + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-cmrra05/anat/sub-cmrra05_space-other_T1w_RPI_r_labels-manual.nii.gz b/derivatives/labels/sub-cmrra05/anat/sub-cmrra05_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-cmrra05/anat/sub-cmrra05_space-other_T1w_RPI_r_labels-manual.nii.gz rename to derivatives/labels/sub-cmrra05/anat/sub-cmrra05_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.nii.gz diff --git a/derivatives/labels/sub-cmrra05/anat/sub-cmrra05_space-other_T2star_label-SC_seg.nii.gz b/derivatives/labels/sub-cmrra05/anat/sub-cmrra05_space-other_T2star_label-SC_seg.nii.gz index 502bbbfeda..6bc7d1b713 100644 --- a/derivatives/labels/sub-cmrra05/anat/sub-cmrra05_space-other_T2star_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-cmrra05/anat/sub-cmrra05_space-other_T2star_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s14679--0ffcada6e127b1d91d27796798e80688d8c4c8d298dbef896f9fc3208839501e.nii.gz +/annex/objects/SHA256E-s14700--5c2c71fa17e21bbdf89f5bfc99b49c615c0a643f139e619e795be29875b693ef.nii.gz diff --git a/derivatives/labels/sub-cmrra05/anat/sub-cmrra05_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-cmrra05/anat/sub-cmrra05_space-other_T2star_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-cmrra05/anat/sub-cmrra05_space-other_T2star_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-cmrra06/anat/sub-cmrra06_space-other_T1w_label-discs_dlabel.json b/derivatives/labels/sub-cmrra06/anat/sub-cmrra06_T1w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-cmrra06/anat/sub-cmrra06_space-other_T1w_label-discs_dlabel.json rename to derivatives/labels/sub-cmrra06/anat/sub-cmrra06_T1w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-cmrra06/anat/sub-cmrra06_space-other_T1w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-cmrra06/anat/sub-cmrra06_T1w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-cmrra06/anat/sub-cmrra06_space-other_T1w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-cmrra06/anat/sub-cmrra06_T1w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-cmrra06/anat/sub-cmrra06_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-cmrra06/anat/sub-cmrra06_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-cmrra06/anat/sub-cmrra06_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-cmrra06/anat/sub-cmrra06_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-cmrra06/anat/sub-cmrra06_T2star_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-cmrra06/anat/sub-cmrra06_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-cmrra06/anat/sub-cmrra06_T2star_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-cmrra06/anat/sub-cmrra06_space-other_T2w_label-discs_dlabel.json b/derivatives/labels/sub-cmrra06/anat/sub-cmrra06_T2w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-cmrra06/anat/sub-cmrra06_space-other_T2w_label-discs_dlabel.json rename to derivatives/labels/sub-cmrra06/anat/sub-cmrra06_T2w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-cmrra06/anat/sub-cmrra06_space-other_T2w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-cmrra06/anat/sub-cmrra06_T2w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-cmrra06/anat/sub-cmrra06_space-other_T2w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-cmrra06/anat/sub-cmrra06_T2w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-cmrra06/anat/sub-cmrra06_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-cmrra06/anat/sub-cmrra06_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-cmrra06/anat/sub-cmrra06_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-cmrra06/anat/sub-cmrra06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-cmrra06/anat/sub-cmrra06_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-cmrra06/anat/sub-cmrra06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-cmrra06/anat/sub-cmrra06_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-cmrra06/anat/sub-cmrra06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-cmrra06/anat/sub-cmrra06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-cmrra06/anat/sub-cmrra06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-cmrra06/anat/sub-cmrra06_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-cmrra06/anat/sub-cmrra06_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-cmrra06/anat/sub-cmrra06_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-cmrra06/anat/sub-cmrra06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-cmrra06/anat/sub-cmrra06_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-cmrra06/anat/sub-cmrra06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-cmrra06/anat/sub-cmrra06_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-cmrra06/anat/sub-cmrra06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-cmrra06/anat/sub-cmrra06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-cmrra06/anat/sub-cmrra06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-cmrra06/anat/sub-cmrra06_space-other_T2star_label-SC_seg.nii.gz b/derivatives/labels/sub-cmrra06/anat/sub-cmrra06_space-other_T2star_label-SC_seg.nii.gz index 2b23e19a60..32f8478329 100644 --- a/derivatives/labels/sub-cmrra06/anat/sub-cmrra06_space-other_T2star_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-cmrra06/anat/sub-cmrra06_space-other_T2star_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s14917--22574f1c60235debc098ff706d7abfaf5f29b5acb635f0523aebcbc9249e508b.nii.gz +/annex/objects/SHA256E-s14938--fa5973634aa39c373434f8952a2411472b834dd27e31b45b7ceec5f422db5112.nii.gz diff --git a/derivatives/labels/sub-cmrra06/anat/sub-cmrra06_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-cmrra06/anat/sub-cmrra06_space-other_T2star_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-cmrra06/anat/sub-cmrra06_space-other_T2star_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-cmrrb01/anat/sub-cmrrb01_space-other_T1w_label-discs_dlabel.json b/derivatives/labels/sub-cmrrb01/anat/sub-cmrrb01_T1w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-cmrrb01/anat/sub-cmrrb01_space-other_T1w_label-discs_dlabel.json rename to derivatives/labels/sub-cmrrb01/anat/sub-cmrrb01_T1w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-cmrrb01/anat/sub-cmrrb01_space-other_T1w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-cmrrb01/anat/sub-cmrrb01_T1w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-cmrrb01/anat/sub-cmrrb01_space-other_T1w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-cmrrb01/anat/sub-cmrrb01_T1w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-cmrrb01/anat/sub-cmrrb01_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-cmrrb01/anat/sub-cmrrb01_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-cmrrb01/anat/sub-cmrrb01_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-cmrrb01/anat/sub-cmrrb01_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-cmrrb01/anat/sub-cmrrb01_T2star_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-cmrrb01/anat/sub-cmrrb01_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-cmrrb01/anat/sub-cmrrb01_T2star_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-cmrrb01/anat/sub-cmrrb01_space-other_T2w_label-discs_dlabel.json b/derivatives/labels/sub-cmrrb01/anat/sub-cmrrb01_T2w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-cmrrb01/anat/sub-cmrrb01_space-other_T2w_label-discs_dlabel.json rename to derivatives/labels/sub-cmrrb01/anat/sub-cmrrb01_T2w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-cmrrb01/anat/sub-cmrrb01_space-other_T2w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-cmrrb01/anat/sub-cmrrb01_T2w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-cmrrb01/anat/sub-cmrrb01_space-other_T2w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-cmrrb01/anat/sub-cmrrb01_T2w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-cmrrb01/anat/sub-cmrrb01_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-cmrrb01/anat/sub-cmrrb01_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-cmrrb01/anat/sub-cmrrb01_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-cmrrb01/anat/sub-cmrrb01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-cmrrb01/anat/sub-cmrrb01_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-cmrrb01/anat/sub-cmrrb01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-cmrrb01/anat/sub-cmrrb01_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-cmrrb01/anat/sub-cmrrb01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-cmrrb01/anat/sub-cmrrb01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-cmrrb01/anat/sub-cmrrb01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-cmrrb01/anat/sub-cmrrb01_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-cmrrb01/anat/sub-cmrrb01_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-cmrrb01/anat/sub-cmrrb01_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-cmrrb01/anat/sub-cmrrb01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-cmrrb01/anat/sub-cmrrb01_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-cmrrb01/anat/sub-cmrrb01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-cmrrb01/anat/sub-cmrrb01_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-cmrrb01/anat/sub-cmrrb01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-cmrrb01/anat/sub-cmrrb01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-cmrrb01/anat/sub-cmrrb01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-cmrrb01/anat/sub-cmrrb01_space-other_T2star_label-SC_seg.nii.gz b/derivatives/labels/sub-cmrrb01/anat/sub-cmrrb01_space-other_T2star_label-SC_seg.nii.gz index 1d45678c10..a0e4056a0b 100644 --- a/derivatives/labels/sub-cmrrb01/anat/sub-cmrrb01_space-other_T2star_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-cmrrb01/anat/sub-cmrrb01_space-other_T2star_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s6783--e0745770e5c8dbb78afff47a85c2a49b62bdef21129be0ae9a75875023ffeb04.nii.gz +/annex/objects/SHA256E-s28352--e29df4574e76d654988519657e4e09d69140f60b423e8a7f0fc1f96530ab4740.nii.gz diff --git a/derivatives/labels/sub-cmrrb01/anat/sub-cmrrb01_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-cmrrb01/anat/sub-cmrrb01_space-other_T2star_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-cmrrb01/anat/sub-cmrrb01_space-other_T2star_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-cmrrb02/anat/sub-cmrrb02_space-other_T1w_label-discs_dlabel.json b/derivatives/labels/sub-cmrrb02/anat/sub-cmrrb02_T1w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-cmrrb02/anat/sub-cmrrb02_space-other_T1w_label-discs_dlabel.json rename to derivatives/labels/sub-cmrrb02/anat/sub-cmrrb02_T1w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-cmrrb02/anat/sub-cmrrb02_space-other_T1w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-cmrrb02/anat/sub-cmrrb02_T1w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-cmrrb02/anat/sub-cmrrb02_space-other_T1w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-cmrrb02/anat/sub-cmrrb02_T1w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-cmrrb02/anat/sub-cmrrb02_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-cmrrb02/anat/sub-cmrrb02_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-cmrrb02/anat/sub-cmrrb02_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-cmrrb02/anat/sub-cmrrb02_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-cmrrb02/anat/sub-cmrrb02_T2star_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-cmrrb02/anat/sub-cmrrb02_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-cmrrb02/anat/sub-cmrrb02_T2star_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-cmrrb02/anat/sub-cmrrb02_space-other_T2w_label-discs_dlabel.json b/derivatives/labels/sub-cmrrb02/anat/sub-cmrrb02_T2w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-cmrrb02/anat/sub-cmrrb02_space-other_T2w_label-discs_dlabel.json rename to derivatives/labels/sub-cmrrb02/anat/sub-cmrrb02_T2w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-cmrrb02/anat/sub-cmrrb02_space-other_T2w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-cmrrb02/anat/sub-cmrrb02_T2w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-cmrrb02/anat/sub-cmrrb02_space-other_T2w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-cmrrb02/anat/sub-cmrrb02_T2w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-cmrrb02/anat/sub-cmrrb02_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-cmrrb02/anat/sub-cmrrb02_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-cmrrb02/anat/sub-cmrrb02_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-cmrrb02/anat/sub-cmrrb02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-cmrrb02/anat/sub-cmrrb02_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-cmrrb02/anat/sub-cmrrb02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-cmrrb02/anat/sub-cmrrb02_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-cmrrb02/anat/sub-cmrrb02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-cmrrb02/anat/sub-cmrrb02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-cmrrb02/anat/sub-cmrrb02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-cmrrb02/anat/sub-cmrrb02_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-cmrrb02/anat/sub-cmrrb02_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-cmrrb02/anat/sub-cmrrb02_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-cmrrb02/anat/sub-cmrrb02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-cmrrb02/anat/sub-cmrrb02_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-cmrrb02/anat/sub-cmrrb02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-cmrrb02/anat/sub-cmrrb02_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-cmrrb02/anat/sub-cmrrb02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-cmrrb02/anat/sub-cmrrb02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-cmrrb02/anat/sub-cmrrb02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-cmrrb02/anat/sub-cmrrb02_space-other_T2star_label-SC_seg.nii.gz b/derivatives/labels/sub-cmrrb02/anat/sub-cmrrb02_space-other_T2star_label-SC_seg.nii.gz index c9c2b60fd4..4d161b22d0 100644 --- a/derivatives/labels/sub-cmrrb02/anat/sub-cmrrb02_space-other_T2star_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-cmrrb02/anat/sub-cmrrb02_space-other_T2star_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s14895--f479498aa356fc9ba964f714669e9de5f19c030effbf08ab9c19f0bc2dc4e2c5.nii.gz +/annex/objects/SHA256E-s14922--dc3211da88c87249455bd21946530660a4c00ab62dfd1df94dac35b537dd2917.nii.gz diff --git a/derivatives/labels/sub-cmrrb02/anat/sub-cmrrb02_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-cmrrb02/anat/sub-cmrrb02_space-other_T2star_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-cmrrb02/anat/sub-cmrrb02_space-other_T2star_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-cmrrb03/anat/sub-cmrrb03_space-other_T1w_label-discs_dlabel.json b/derivatives/labels/sub-cmrrb03/anat/sub-cmrrb03_T1w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-cmrrb03/anat/sub-cmrrb03_space-other_T1w_label-discs_dlabel.json rename to derivatives/labels/sub-cmrrb03/anat/sub-cmrrb03_T1w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-cmrrb03/anat/sub-cmrrb03_space-other_T1w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-cmrrb03/anat/sub-cmrrb03_T1w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-cmrrb03/anat/sub-cmrrb03_space-other_T1w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-cmrrb03/anat/sub-cmrrb03_T1w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-cmrrb03/anat/sub-cmrrb03_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-cmrrb03/anat/sub-cmrrb03_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-cmrrb03/anat/sub-cmrrb03_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-cmrrb03/anat/sub-cmrrb03_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-cmrrb03/anat/sub-cmrrb03_T2star_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-cmrrb03/anat/sub-cmrrb03_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-cmrrb03/anat/sub-cmrrb03_T2star_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-cmrrb03/anat/sub-cmrrb03_space-other_T2w_label-discs_dlabel.json b/derivatives/labels/sub-cmrrb03/anat/sub-cmrrb03_T2w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-cmrrb03/anat/sub-cmrrb03_space-other_T2w_label-discs_dlabel.json rename to derivatives/labels/sub-cmrrb03/anat/sub-cmrrb03_T2w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-cmrrb03/anat/sub-cmrrb03_space-other_T2w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-cmrrb03/anat/sub-cmrrb03_T2w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-cmrrb03/anat/sub-cmrrb03_space-other_T2w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-cmrrb03/anat/sub-cmrrb03_T2w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-cmrrb03/anat/sub-cmrrb03_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-cmrrb03/anat/sub-cmrrb03_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-cmrrb03/anat/sub-cmrrb03_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-cmrrb03/anat/sub-cmrrb03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-cmrrb03/anat/sub-cmrrb03_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-cmrrb03/anat/sub-cmrrb03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-cmrrb03/anat/sub-cmrrb03_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-cmrrb03/anat/sub-cmrrb03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-cmrrb03/anat/sub-cmrrb03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-cmrrb03/anat/sub-cmrrb03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-cmrrb03/anat/sub-cmrrb03_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-cmrrb03/anat/sub-cmrrb03_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-cmrrb03/anat/sub-cmrrb03_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-cmrrb03/anat/sub-cmrrb03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-cmrrb03/anat/sub-cmrrb03_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-cmrrb03/anat/sub-cmrrb03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-cmrrb03/anat/sub-cmrrb03_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-cmrrb03/anat/sub-cmrrb03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-cmrrb03/anat/sub-cmrrb03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-cmrrb03/anat/sub-cmrrb03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-cmrrb03/anat/sub-cmrrb03_space-other_T2star_label-SC_seg.nii.gz b/derivatives/labels/sub-cmrrb03/anat/sub-cmrrb03_space-other_T2star_label-SC_seg.nii.gz index ce70d4bea9..4e2a2cec33 100644 --- a/derivatives/labels/sub-cmrrb03/anat/sub-cmrrb03_space-other_T2star_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-cmrrb03/anat/sub-cmrrb03_space-other_T2star_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s14948--85384ba7cb84873180146149d91f064d028abd26aab992fb6675bb40f4434dc3.nii.gz +/annex/objects/SHA256E-s14969--13cb0bfd9faddf500f246e05de94a0e9c14e3d86c55f00d07cd05aa3dbdd8807.nii.gz diff --git a/derivatives/labels/sub-cmrrb03/anat/sub-cmrrb03_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-cmrrb03/anat/sub-cmrrb03_space-other_T2star_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-cmrrb03/anat/sub-cmrrb03_space-other_T2star_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-cmrrb03/anat/sub-cmrrb03_space-other_T2w_csflabel-SC_seg.json b/derivatives/labels/sub-cmrrb03/anat/sub-cmrrb03_space-other_T2w_label-CSF_seg.json similarity index 100% rename from derivatives/labels/sub-cmrrb03/anat/sub-cmrrb03_space-other_T2w_csflabel-SC_seg.json rename to derivatives/labels/sub-cmrrb03/anat/sub-cmrrb03_space-other_T2w_label-CSF_seg.json diff --git a/derivatives/labels/sub-cmrrb03/anat/sub-cmrrb03_space-other_T2w_csflabel-SC_seg.nii.gz b/derivatives/labels/sub-cmrrb03/anat/sub-cmrrb03_space-other_T2w_label-CSF_seg.nii.gz similarity index 100% rename from derivatives/labels/sub-cmrrb03/anat/sub-cmrrb03_space-other_T2w_csflabel-SC_seg.nii.gz rename to derivatives/labels/sub-cmrrb03/anat/sub-cmrrb03_space-other_T2w_label-CSF_seg.nii.gz diff --git a/derivatives/labels/sub-cmrrb03/anat/sub-cmrrb03_space-other_T2w_label-canal_seg.json b/derivatives/labels/sub-cmrrb03/anat/sub-cmrrb03_space-other_T2w_label-canal_seg.json new file mode 100644 index 0000000000..9b765ae333 --- /dev/null +++ b/derivatives/labels/sub-cmrrb03/anat/sub-cmrrb03_space-other_T2w_label-canal_seg.json @@ -0,0 +1,11 @@ +{ + "SpatialReference": { + "Orientation": "RPI", + "Resampling": "0.8x0.8x0.8" + }, + "GeneratedBy": [ + { + "Description": "Created from label-CSF_seg" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-cmrrb03/anat/sub-cmrrb03_space-other_T2w_label-canal_seg.nii.gz b/derivatives/labels/sub-cmrrb03/anat/sub-cmrrb03_space-other_T2w_label-canal_seg.nii.gz new file mode 100644 index 0000000000..20303a952d --- /dev/null +++ b/derivatives/labels/sub-cmrrb03/anat/sub-cmrrb03_space-other_T2w_label-canal_seg.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s138818--86caeedae0d5cb73866475f34984bf1cd54ab1639ea05498bd8ac3fc338e8a41.nii.gz diff --git a/derivatives/labels/sub-cmrrb04/anat/sub-cmrrb04_space-other_T1w_label-discs_dlabel.json b/derivatives/labels/sub-cmrrb04/anat/sub-cmrrb04_T1w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-cmrrb04/anat/sub-cmrrb04_space-other_T1w_label-discs_dlabel.json rename to derivatives/labels/sub-cmrrb04/anat/sub-cmrrb04_T1w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-cmrrb04/anat/sub-cmrrb04_space-other_T1w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-cmrrb04/anat/sub-cmrrb04_T1w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-cmrrb04/anat/sub-cmrrb04_space-other_T1w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-cmrrb04/anat/sub-cmrrb04_T1w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-cmrrb04/anat/sub-cmrrb04_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-cmrrb04/anat/sub-cmrrb04_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-cmrrb04/anat/sub-cmrrb04_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-cmrrb04/anat/sub-cmrrb04_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-cmrrb04/anat/sub-cmrrb04_T2star_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-cmrrb04/anat/sub-cmrrb04_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-cmrrb04/anat/sub-cmrrb04_T2star_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-cmrrb04/anat/sub-cmrrb04_space-other_T2w_label-discs_dlabel.json b/derivatives/labels/sub-cmrrb04/anat/sub-cmrrb04_T2w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-cmrrb04/anat/sub-cmrrb04_space-other_T2w_label-discs_dlabel.json rename to derivatives/labels/sub-cmrrb04/anat/sub-cmrrb04_T2w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-cmrrb04/anat/sub-cmrrb04_space-other_T2w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-cmrrb04/anat/sub-cmrrb04_T2w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-cmrrb04/anat/sub-cmrrb04_space-other_T2w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-cmrrb04/anat/sub-cmrrb04_T2w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-cmrrb04/anat/sub-cmrrb04_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-cmrrb04/anat/sub-cmrrb04_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-cmrrb04/anat/sub-cmrrb04_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-cmrrb04/anat/sub-cmrrb04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-cmrrb04/anat/sub-cmrrb04_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-cmrrb04/anat/sub-cmrrb04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-cmrrb04/anat/sub-cmrrb04_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-cmrrb04/anat/sub-cmrrb04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-cmrrb04/anat/sub-cmrrb04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-cmrrb04/anat/sub-cmrrb04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-cmrrb04/anat/sub-cmrrb04_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-cmrrb04/anat/sub-cmrrb04_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-cmrrb04/anat/sub-cmrrb04_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-cmrrb04/anat/sub-cmrrb04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-cmrrb04/anat/sub-cmrrb04_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-cmrrb04/anat/sub-cmrrb04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-cmrrb04/anat/sub-cmrrb04_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-cmrrb04/anat/sub-cmrrb04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-cmrrb04/anat/sub-cmrrb04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-cmrrb04/anat/sub-cmrrb04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-cmrrb04/anat/sub-cmrrb04_space-other_T2star_label-SC_seg.nii.gz b/derivatives/labels/sub-cmrrb04/anat/sub-cmrrb04_space-other_T2star_label-SC_seg.nii.gz index d24cdb187c..e5ce70de77 100644 --- a/derivatives/labels/sub-cmrrb04/anat/sub-cmrrb04_space-other_T2star_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-cmrrb04/anat/sub-cmrrb04_space-other_T2star_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s14971--9c0dc2d3b8618130466b5a4c5ccb682f7be25495892c14851147681d9a347c97.nii.gz +/annex/objects/SHA256E-s14992--8a52beb4c34245b79a38d4135fc9a65937e35f4c17f4d0eee8a20e6d7894e4a3.nii.gz diff --git a/derivatives/labels/sub-cmrrb04/anat/sub-cmrrb04_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-cmrrb04/anat/sub-cmrrb04_space-other_T2star_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-cmrrb04/anat/sub-cmrrb04_space-other_T2star_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-cmrrb05/anat/sub-cmrrb05_space-other_T1w_label-discs_dlabel.json b/derivatives/labels/sub-cmrrb05/anat/sub-cmrrb05_T1w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-cmrrb05/anat/sub-cmrrb05_space-other_T1w_label-discs_dlabel.json rename to derivatives/labels/sub-cmrrb05/anat/sub-cmrrb05_T1w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-cmrrb05/anat/sub-cmrrb05_space-other_T1w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-cmrrb05/anat/sub-cmrrb05_T1w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-cmrrb05/anat/sub-cmrrb05_space-other_T1w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-cmrrb05/anat/sub-cmrrb05_T1w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-cmrrb05/anat/sub-cmrrb05_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-cmrrb05/anat/sub-cmrrb05_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-cmrrb05/anat/sub-cmrrb05_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-cmrrb05/anat/sub-cmrrb05_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-cmrrb05/anat/sub-cmrrb05_T2star_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-cmrrb05/anat/sub-cmrrb05_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-cmrrb05/anat/sub-cmrrb05_T2star_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-cmrrb05/anat/sub-cmrrb05_space-other_T2w_label-discs_dlabel.json b/derivatives/labels/sub-cmrrb05/anat/sub-cmrrb05_T2w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-cmrrb05/anat/sub-cmrrb05_space-other_T2w_label-discs_dlabel.json rename to derivatives/labels/sub-cmrrb05/anat/sub-cmrrb05_T2w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-cmrrb05/anat/sub-cmrrb05_space-other_T2w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-cmrrb05/anat/sub-cmrrb05_T2w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-cmrrb05/anat/sub-cmrrb05_space-other_T2w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-cmrrb05/anat/sub-cmrrb05_T2w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-cmrrb05/anat/sub-cmrrb05_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-cmrrb05/anat/sub-cmrrb05_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-cmrrb05/anat/sub-cmrrb05_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-cmrrb05/anat/sub-cmrrb05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-cmrrb05/anat/sub-cmrrb05_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-cmrrb05/anat/sub-cmrrb05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-cmrrb05/anat/sub-cmrrb05_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-cmrrb05/anat/sub-cmrrb05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-cmrrb05/anat/sub-cmrrb05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-cmrrb05/anat/sub-cmrrb05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-cmrrb05/anat/sub-cmrrb05_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-cmrrb05/anat/sub-cmrrb05_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-cmrrb05/anat/sub-cmrrb05_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-cmrrb05/anat/sub-cmrrb05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-cmrrb05/anat/sub-cmrrb05_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-cmrrb05/anat/sub-cmrrb05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-cmrrb05/anat/sub-cmrrb05_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-cmrrb05/anat/sub-cmrrb05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-cmrrb05/anat/sub-cmrrb05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-cmrrb05/anat/sub-cmrrb05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-cmrrb05/anat/sub-cmrrb05_space-other_T2star_label-SC_seg.nii.gz b/derivatives/labels/sub-cmrrb05/anat/sub-cmrrb05_space-other_T2star_label-SC_seg.nii.gz index 9d5bf212bd..9f72d6e5ed 100644 --- a/derivatives/labels/sub-cmrrb05/anat/sub-cmrrb05_space-other_T2star_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-cmrrb05/anat/sub-cmrrb05_space-other_T2star_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s14754--f37598e120d2f9ed4f02302dde1ef1b2188d1a9311b58bdf65839605b2e3352e.nii.gz +/annex/objects/SHA256E-s14780--fd6f292ab2f0b46fcfd708163c95234017105f0e229db81598ce2faaeb79a6dd.nii.gz diff --git a/derivatives/labels/sub-cmrrb05/anat/sub-cmrrb05_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-cmrrb05/anat/sub-cmrrb05_space-other_T2star_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-cmrrb05/anat/sub-cmrrb05_space-other_T2star_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-cmrrb06/anat/sub-cmrrb06_space-other_T1w_label-discs_dlabel.json b/derivatives/labels/sub-cmrrb06/anat/sub-cmrrb06_T1w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-cmrrb06/anat/sub-cmrrb06_space-other_T1w_label-discs_dlabel.json rename to derivatives/labels/sub-cmrrb06/anat/sub-cmrrb06_T1w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-cmrrb06/anat/sub-cmrrb06_space-other_T1w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-cmrrb06/anat/sub-cmrrb06_T1w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-cmrrb06/anat/sub-cmrrb06_space-other_T1w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-cmrrb06/anat/sub-cmrrb06_T1w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-cmrrb06/anat/sub-cmrrb06_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-cmrrb06/anat/sub-cmrrb06_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-cmrrb06/anat/sub-cmrrb06_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-cmrrb06/anat/sub-cmrrb06_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-cmrrb06/anat/sub-cmrrb06_T2star_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-cmrrb06/anat/sub-cmrrb06_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-cmrrb06/anat/sub-cmrrb06_T2star_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-cmrrb06/anat/sub-cmrrb06_space-other_T2w_label-discs_dlabel.json b/derivatives/labels/sub-cmrrb06/anat/sub-cmrrb06_T2w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-cmrrb06/anat/sub-cmrrb06_space-other_T2w_label-discs_dlabel.json rename to derivatives/labels/sub-cmrrb06/anat/sub-cmrrb06_T2w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-cmrrb06/anat/sub-cmrrb06_space-other_T2w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-cmrrb06/anat/sub-cmrrb06_T2w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-cmrrb06/anat/sub-cmrrb06_space-other_T2w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-cmrrb06/anat/sub-cmrrb06_T2w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-cmrrb06/anat/sub-cmrrb06_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-cmrrb06/anat/sub-cmrrb06_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-cmrrb06/anat/sub-cmrrb06_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-cmrrb06/anat/sub-cmrrb06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-cmrrb06/anat/sub-cmrrb06_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-cmrrb06/anat/sub-cmrrb06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-cmrrb06/anat/sub-cmrrb06_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-cmrrb06/anat/sub-cmrrb06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-cmrrb06/anat/sub-cmrrb06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-cmrrb06/anat/sub-cmrrb06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-cmrrb06/anat/sub-cmrrb06_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-cmrrb06/anat/sub-cmrrb06_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-cmrrb06/anat/sub-cmrrb06_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-cmrrb06/anat/sub-cmrrb06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-cmrrb06/anat/sub-cmrrb06_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-cmrrb06/anat/sub-cmrrb06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-cmrrb06/anat/sub-cmrrb06_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-cmrrb06/anat/sub-cmrrb06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-cmrrb06/anat/sub-cmrrb06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-cmrrb06/anat/sub-cmrrb06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-cmrrb06/anat/sub-cmrrb06_space-other_T2star_label-SC_seg.nii.gz b/derivatives/labels/sub-cmrrb06/anat/sub-cmrrb06_space-other_T2star_label-SC_seg.nii.gz index d650efcc95..4077d8c56b 100644 --- a/derivatives/labels/sub-cmrrb06/anat/sub-cmrrb06_space-other_T2star_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-cmrrb06/anat/sub-cmrrb06_space-other_T2star_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s6868--bfa3ba8ce68363092ee178dc944e3b40b9710919a32bacaa0d9bd6c0a0f35b98.nii.gz +/annex/objects/SHA256E-s28512--f74add07049871cd26b1d7923845e29561ae3043d364852f075a89cca741ad90.nii.gz diff --git a/derivatives/labels/sub-cmrrb06/anat/sub-cmrrb06_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-cmrrb06/anat/sub-cmrrb06_space-other_T2star_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-cmrrb06/anat/sub-cmrrb06_space-other_T2star_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-cmrrb07/anat/sub-cmrrb07_space-other_T1w_label-discs_dlabel.json b/derivatives/labels/sub-cmrrb07/anat/sub-cmrrb07_T1w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-cmrrb07/anat/sub-cmrrb07_space-other_T1w_label-discs_dlabel.json rename to derivatives/labels/sub-cmrrb07/anat/sub-cmrrb07_T1w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-cmrrb07/anat/sub-cmrrb07_space-other_T1w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-cmrrb07/anat/sub-cmrrb07_T1w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-cmrrb07/anat/sub-cmrrb07_space-other_T1w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-cmrrb07/anat/sub-cmrrb07_T1w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-cmrrb07/anat/sub-cmrrb07_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-cmrrb07/anat/sub-cmrrb07_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-cmrrb07/anat/sub-cmrrb07_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-cmrrb07/anat/sub-cmrrb07_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-cmrrb07/anat/sub-cmrrb07_T2star_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-cmrrb07/anat/sub-cmrrb07_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-cmrrb07/anat/sub-cmrrb07_T2star_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-cmrrb07/anat/sub-cmrrb07_space-other_T2w_label-discs_dlabel.json b/derivatives/labels/sub-cmrrb07/anat/sub-cmrrb07_T2w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-cmrrb07/anat/sub-cmrrb07_space-other_T2w_label-discs_dlabel.json rename to derivatives/labels/sub-cmrrb07/anat/sub-cmrrb07_T2w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-cmrrb07/anat/sub-cmrrb07_space-other_T2w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-cmrrb07/anat/sub-cmrrb07_T2w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-cmrrb07/anat/sub-cmrrb07_space-other_T2w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-cmrrb07/anat/sub-cmrrb07_T2w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-cmrrb07/anat/sub-cmrrb07_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-cmrrb07/anat/sub-cmrrb07_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-cmrrb07/anat/sub-cmrrb07_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-cmrrb07/anat/sub-cmrrb07_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-cmrrb07/anat/sub-cmrrb07_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-cmrrb07/anat/sub-cmrrb07_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-cmrrb07/anat/sub-cmrrb07_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-cmrrb07/anat/sub-cmrrb07_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-cmrrb07/anat/sub-cmrrb07_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-cmrrb07/anat/sub-cmrrb07_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-cmrrb07/anat/sub-cmrrb07_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-cmrrb07/anat/sub-cmrrb07_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-cmrrb07/anat/sub-cmrrb07_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-cmrrb07/anat/sub-cmrrb07_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-cmrrb07/anat/sub-cmrrb07_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-cmrrb07/anat/sub-cmrrb07_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-cmrrb07/anat/sub-cmrrb07_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-cmrrb07/anat/sub-cmrrb07_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-cmrrb07/anat/sub-cmrrb07_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-cmrrb07/anat/sub-cmrrb07_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-cmrrb07/anat/sub-cmrrb07_space-other_T2star_label-SC_seg.nii.gz b/derivatives/labels/sub-cmrrb07/anat/sub-cmrrb07_space-other_T2star_label-SC_seg.nii.gz index e0bec8091b..bf5d460b9b 100644 --- a/derivatives/labels/sub-cmrrb07/anat/sub-cmrrb07_space-other_T2star_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-cmrrb07/anat/sub-cmrrb07_space-other_T2star_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s6805--9957110e9d17ddbb7c059ab4dcc9d377df04c8f6b0dafbccdeea5745374bf635.nii.gz +/annex/objects/SHA256E-s28380--b6bae4ce30a72c7ff04cdaa16768a93901f1c910a9a9759aa4764a0cda6c0fdf.nii.gz diff --git a/derivatives/labels/sub-cmrrb07/anat/sub-cmrrb07_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-cmrrb07/anat/sub-cmrrb07_space-other_T2star_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-cmrrb07/anat/sub-cmrrb07_space-other_T2star_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-dresden01/anat/sub-dresden01_space-other_T1w_label-discs_dlabel.json b/derivatives/labels/sub-dresden01/anat/sub-dresden01_T1w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-dresden01/anat/sub-dresden01_space-other_T1w_label-discs_dlabel.json rename to derivatives/labels/sub-dresden01/anat/sub-dresden01_T1w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-dresden01/anat/sub-dresden01_space-other_T1w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-dresden01/anat/sub-dresden01_T1w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-dresden01/anat/sub-dresden01_space-other_T1w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-dresden01/anat/sub-dresden01_T1w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-dresden01/anat/sub-dresden01_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-dresden01/anat/sub-dresden01_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-dresden01/anat/sub-dresden01_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-dresden01/anat/sub-dresden01_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-dresden01/anat/sub-dresden01_T2star_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-dresden01/anat/sub-dresden01_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-dresden01/anat/sub-dresden01_T2star_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-dresden01/anat/sub-dresden01_space-other_T2w_label-discs_dlabel.json b/derivatives/labels/sub-dresden01/anat/sub-dresden01_T2w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-dresden01/anat/sub-dresden01_space-other_T2w_label-discs_dlabel.json rename to derivatives/labels/sub-dresden01/anat/sub-dresden01_T2w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-dresden01/anat/sub-dresden01_space-other_T2w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-dresden01/anat/sub-dresden01_T2w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-dresden01/anat/sub-dresden01_space-other_T2w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-dresden01/anat/sub-dresden01_T2w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-dresden01/anat/sub-dresden01_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-dresden01/anat/sub-dresden01_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-dresden01/anat/sub-dresden01_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-dresden01/anat/sub-dresden01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-dresden01/anat/sub-dresden01_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-dresden01/anat/sub-dresden01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-dresden01/anat/sub-dresden01_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-dresden01/anat/sub-dresden01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-dresden01/anat/sub-dresden01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-dresden01/anat/sub-dresden01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-dresden01/anat/sub-dresden01_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-dresden01/anat/sub-dresden01_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-dresden01/anat/sub-dresden01_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-dresden01/anat/sub-dresden01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-dresden01/anat/sub-dresden01_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-dresden01/anat/sub-dresden01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-dresden01/anat/sub-dresden01_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-dresden01/anat/sub-dresden01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-dresden01/anat/sub-dresden01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-dresden01/anat/sub-dresden01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-dresden01/anat/sub-dresden01_space-other_T2star_label-SC_seg.nii.gz b/derivatives/labels/sub-dresden01/anat/sub-dresden01_space-other_T2star_label-SC_seg.nii.gz index e03ae0dd7f..e29d5e43f8 100644 --- a/derivatives/labels/sub-dresden01/anat/sub-dresden01_space-other_T2star_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-dresden01/anat/sub-dresden01_space-other_T2star_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s6792--194e96eb277094f0d6fe6f595b982d0e90cd96d87820e8c914b59e37b6b5a31e.nii.gz +/annex/objects/SHA256E-s28315--c3aeb1cfada5bc35b41e244126e6b6d15f6b396a03262c20b0c7a822b9df2e89.nii.gz diff --git a/derivatives/labels/sub-dresden01/anat/sub-dresden01_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-dresden01/anat/sub-dresden01_space-other_T2star_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-dresden01/anat/sub-dresden01_space-other_T2star_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-dresden02/anat/sub-dresden02_space-other_T1w_label-discs_dlabel.json b/derivatives/labels/sub-dresden02/anat/sub-dresden02_T1w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-dresden02/anat/sub-dresden02_space-other_T1w_label-discs_dlabel.json rename to derivatives/labels/sub-dresden02/anat/sub-dresden02_T1w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-dresden02/anat/sub-dresden02_space-other_T1w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-dresden02/anat/sub-dresden02_T1w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-dresden02/anat/sub-dresden02_space-other_T1w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-dresden02/anat/sub-dresden02_T1w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-dresden02/anat/sub-dresden02_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-dresden02/anat/sub-dresden02_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-dresden02/anat/sub-dresden02_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-dresden02/anat/sub-dresden02_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-dresden02/anat/sub-dresden02_T2star_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-dresden02/anat/sub-dresden02_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-dresden02/anat/sub-dresden02_T2star_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-dresden02/anat/sub-dresden02_space-other_T2w_label-discs_dlabel.json b/derivatives/labels/sub-dresden02/anat/sub-dresden02_T2w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-dresden02/anat/sub-dresden02_space-other_T2w_label-discs_dlabel.json rename to derivatives/labels/sub-dresden02/anat/sub-dresden02_T2w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-dresden02/anat/sub-dresden02_space-other_T2w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-dresden02/anat/sub-dresden02_T2w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-dresden02/anat/sub-dresden02_space-other_T2w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-dresden02/anat/sub-dresden02_T2w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-dresden02/anat/sub-dresden02_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-dresden02/anat/sub-dresden02_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-dresden02/anat/sub-dresden02_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-dresden02/anat/sub-dresden02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-dresden02/anat/sub-dresden02_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-dresden02/anat/sub-dresden02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-dresden02/anat/sub-dresden02_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-dresden02/anat/sub-dresden02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-dresden02/anat/sub-dresden02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-dresden02/anat/sub-dresden02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-dresden02/anat/sub-dresden02_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-dresden02/anat/sub-dresden02_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-dresden02/anat/sub-dresden02_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-dresden02/anat/sub-dresden02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-dresden02/anat/sub-dresden02_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-dresden02/anat/sub-dresden02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-dresden02/anat/sub-dresden02_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-dresden02/anat/sub-dresden02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-dresden02/anat/sub-dresden02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-dresden02/anat/sub-dresden02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-dresden02/anat/sub-dresden02_space-other_T2star_label-SC_seg.nii.gz b/derivatives/labels/sub-dresden02/anat/sub-dresden02_space-other_T2star_label-SC_seg.nii.gz index 0ecd7fa09c..df5a265407 100644 --- a/derivatives/labels/sub-dresden02/anat/sub-dresden02_space-other_T2star_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-dresden02/anat/sub-dresden02_space-other_T2star_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s6833--13bfb56e547e81d4ea86f015c11b925b6924f3a756147119c4afa63d5f67fc5c.nii.gz +/annex/objects/SHA256E-s28557--4d7b812a1bf0408283f63d1249700aa467c88ffa6791f334acf8ff409b1ba6a8.nii.gz diff --git a/derivatives/labels/sub-dresden02/anat/sub-dresden02_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-dresden02/anat/sub-dresden02_space-other_T2star_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-dresden02/anat/sub-dresden02_space-other_T2star_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-fslAchieva01/anat/sub-fslAchieva01_space-other_T1w_label-discs_dlabel.json b/derivatives/labels/sub-fslAchieva01/anat/sub-fslAchieva01_T1w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-fslAchieva01/anat/sub-fslAchieva01_space-other_T1w_label-discs_dlabel.json rename to derivatives/labels/sub-fslAchieva01/anat/sub-fslAchieva01_T1w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-fslAchieva01/anat/sub-fslAchieva01_space-other_T1w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-fslAchieva01/anat/sub-fslAchieva01_T1w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-fslAchieva01/anat/sub-fslAchieva01_space-other_T1w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-fslAchieva01/anat/sub-fslAchieva01_T1w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-fslAchieva01/anat/sub-fslAchieva01_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-fslAchieva01/anat/sub-fslAchieva01_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-fslAchieva01/anat/sub-fslAchieva01_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-fslAchieva01/anat/sub-fslAchieva01_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-fslAchieva01/anat/sub-fslAchieva01_T2star_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-fslAchieva01/anat/sub-fslAchieva01_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-fslAchieva01/anat/sub-fslAchieva01_T2star_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-fslAchieva01/anat/sub-fslAchieva01_space-other_T2w_label-discs_dlabel.json b/derivatives/labels/sub-fslAchieva01/anat/sub-fslAchieva01_T2w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-fslAchieva01/anat/sub-fslAchieva01_space-other_T2w_label-discs_dlabel.json rename to derivatives/labels/sub-fslAchieva01/anat/sub-fslAchieva01_T2w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-fslAchieva01/anat/sub-fslAchieva01_space-other_T2w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-fslAchieva01/anat/sub-fslAchieva01_T2w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-fslAchieva01/anat/sub-fslAchieva01_space-other_T2w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-fslAchieva01/anat/sub-fslAchieva01_T2w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-fslAchieva01/anat/sub-fslAchieva01_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-fslAchieva01/anat/sub-fslAchieva01_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-fslAchieva01/anat/sub-fslAchieva01_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-fslAchieva01/anat/sub-fslAchieva01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-fslAchieva01/anat/sub-fslAchieva01_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-fslAchieva01/anat/sub-fslAchieva01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-fslAchieva01/anat/sub-fslAchieva01_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-fslAchieva01/anat/sub-fslAchieva01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-fslAchieva01/anat/sub-fslAchieva01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-fslAchieva01/anat/sub-fslAchieva01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-fslAchieva01/anat/sub-fslAchieva01_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-fslAchieva01/anat/sub-fslAchieva01_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-fslAchieva01/anat/sub-fslAchieva01_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-fslAchieva01/anat/sub-fslAchieva01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-fslAchieva01/anat/sub-fslAchieva01_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-fslAchieva01/anat/sub-fslAchieva01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-fslAchieva01/anat/sub-fslAchieva01_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-fslAchieva01/anat/sub-fslAchieva01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-fslAchieva01/anat/sub-fslAchieva01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-fslAchieva01/anat/sub-fslAchieva01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-fslAchieva01/anat/sub-fslAchieva01_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.json b/derivatives/labels/sub-fslAchieva01/anat/sub-fslAchieva01_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.json new file mode 100644 index 0000000000..e537a137e5 --- /dev/null +++ b/derivatives/labels/sub-fslAchieva01/anat/sub-fslAchieva01_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.json @@ -0,0 +1,11 @@ +{ + "SpatialReference": { + "Orientation": "RPI", + "Resampling": "1x1x1" + }, + "GeneratedBy": [ + { + "Description": "Manual label of C2 and C5 mid-vertebrae, at the center of the spinal cord." + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-fslAchieva01/anat/sub-fslAchieva01_space-other_T1w_RPI_r_labels-manual.nii.gz b/derivatives/labels/sub-fslAchieva01/anat/sub-fslAchieva01_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-fslAchieva01/anat/sub-fslAchieva01_space-other_T1w_RPI_r_labels-manual.nii.gz rename to derivatives/labels/sub-fslAchieva01/anat/sub-fslAchieva01_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.nii.gz diff --git a/derivatives/labels/sub-fslAchieva01/anat/sub-fslAchieva01_space-other_T2star_gmlabel-SC_seg.nii.gz b/derivatives/labels/sub-fslAchieva01/anat/sub-fslAchieva01_space-other_T2star_gmlabel-SC_seg.nii.gz index 1dcb5e4349..7c3e8b7207 100644 --- a/derivatives/labels/sub-fslAchieva01/anat/sub-fslAchieva01_space-other_T2star_gmlabel-SC_seg.nii.gz +++ b/derivatives/labels/sub-fslAchieva01/anat/sub-fslAchieva01_space-other_T2star_gmlabel-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s14688--877cb02bb1c52c39012f61db4d558a0b430f70b1d98025f6c749d8264c95a629.nii.gz +/annex/objects/SHA256E-s14729--25de051f457b962762e95b269ce6c1689687d7a0480021efe42de264c3004060.nii.gz diff --git a/derivatives/labels/sub-fslAchieva01/anat/sub-fslAchieva01_space-other_T2star_label-SC_seg.nii.gz b/derivatives/labels/sub-fslAchieva01/anat/sub-fslAchieva01_space-other_T2star_label-SC_seg.nii.gz index f695df37e7..d051db56f4 100644 --- a/derivatives/labels/sub-fslAchieva01/anat/sub-fslAchieva01_space-other_T2star_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-fslAchieva01/anat/sub-fslAchieva01_space-other_T2star_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s8266--319cd437f9a22a5143d428d938415341c8a00d638e81cd8459aa413b498a1339.nii.gz +/annex/objects/SHA256E-s8287--3d649284f7abb6422c913ec7db74ffa8d6849433dac39d1f09fb04a7b5907022.nii.gz diff --git a/derivatives/labels/sub-fslAchieva01/anat/sub-fslAchieva01_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-fslAchieva01/anat/sub-fslAchieva01_space-other_T2star_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-fslAchieva01/anat/sub-fslAchieva01_space-other_T2star_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-fslAchieva02/anat/sub-fslAchieva02_space-other_T1w_label-discs_dlabel.json b/derivatives/labels/sub-fslAchieva02/anat/sub-fslAchieva02_T1w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-fslAchieva02/anat/sub-fslAchieva02_space-other_T1w_label-discs_dlabel.json rename to derivatives/labels/sub-fslAchieva02/anat/sub-fslAchieva02_T1w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-fslAchieva02/anat/sub-fslAchieva02_space-other_T1w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-fslAchieva02/anat/sub-fslAchieva02_T1w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-fslAchieva02/anat/sub-fslAchieva02_space-other_T1w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-fslAchieva02/anat/sub-fslAchieva02_T1w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-fslAchieva02/anat/sub-fslAchieva02_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-fslAchieva02/anat/sub-fslAchieva02_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-fslAchieva02/anat/sub-fslAchieva02_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-fslAchieva02/anat/sub-fslAchieva02_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-fslAchieva02/anat/sub-fslAchieva02_T2star_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-fslAchieva02/anat/sub-fslAchieva02_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-fslAchieva02/anat/sub-fslAchieva02_T2star_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-fslAchieva02/anat/sub-fslAchieva02_space-other_T2w_label-discs_dlabel.json b/derivatives/labels/sub-fslAchieva02/anat/sub-fslAchieva02_T2w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-fslAchieva02/anat/sub-fslAchieva02_space-other_T2w_label-discs_dlabel.json rename to derivatives/labels/sub-fslAchieva02/anat/sub-fslAchieva02_T2w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-fslAchieva02/anat/sub-fslAchieva02_space-other_T2w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-fslAchieva02/anat/sub-fslAchieva02_T2w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-fslAchieva02/anat/sub-fslAchieva02_space-other_T2w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-fslAchieva02/anat/sub-fslAchieva02_T2w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-fslAchieva02/anat/sub-fslAchieva02_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-fslAchieva02/anat/sub-fslAchieva02_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-fslAchieva02/anat/sub-fslAchieva02_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-fslAchieva02/anat/sub-fslAchieva02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-fslAchieva02/anat/sub-fslAchieva02_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-fslAchieva02/anat/sub-fslAchieva02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-fslAchieva02/anat/sub-fslAchieva02_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-fslAchieva02/anat/sub-fslAchieva02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-fslAchieva02/anat/sub-fslAchieva02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-fslAchieva02/anat/sub-fslAchieva02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-fslAchieva02/anat/sub-fslAchieva02_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-fslAchieva02/anat/sub-fslAchieva02_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-fslAchieva02/anat/sub-fslAchieva02_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-fslAchieva02/anat/sub-fslAchieva02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-fslAchieva02/anat/sub-fslAchieva02_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-fslAchieva02/anat/sub-fslAchieva02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-fslAchieva02/anat/sub-fslAchieva02_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-fslAchieva02/anat/sub-fslAchieva02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-fslAchieva02/anat/sub-fslAchieva02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-fslAchieva02/anat/sub-fslAchieva02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-fslAchieva02/anat/sub-fslAchieva02_space-other_T2star_label-SC_seg.nii.gz b/derivatives/labels/sub-fslAchieva02/anat/sub-fslAchieva02_space-other_T2star_label-SC_seg.nii.gz index 2116ce3b99..24efd7dcdc 100644 --- a/derivatives/labels/sub-fslAchieva02/anat/sub-fslAchieva02_space-other_T2star_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-fslAchieva02/anat/sub-fslAchieva02_space-other_T2star_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s8263--6c2b26b912510abb818df030f197ad2e1665a7cbe835fd512ee417cc8d1bdc63.nii.gz +/annex/objects/SHA256E-s8284--99e2fb1f496e7e0a546d79590f4e07c45099dd1bbfb074da10ebaec476e7463f.nii.gz diff --git a/derivatives/labels/sub-fslAchieva02/anat/sub-fslAchieva02_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-fslAchieva02/anat/sub-fslAchieva02_space-other_T2star_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-fslAchieva02/anat/sub-fslAchieva02_space-other_T2star_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-fslAchieva03/anat/sub-fslAchieva03_space-other_T1w_label-discs_dlabel.json b/derivatives/labels/sub-fslAchieva03/anat/sub-fslAchieva03_T1w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-fslAchieva03/anat/sub-fslAchieva03_space-other_T1w_label-discs_dlabel.json rename to derivatives/labels/sub-fslAchieva03/anat/sub-fslAchieva03_T1w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-fslAchieva03/anat/sub-fslAchieva03_space-other_T1w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-fslAchieva03/anat/sub-fslAchieva03_T1w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-fslAchieva03/anat/sub-fslAchieva03_space-other_T1w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-fslAchieva03/anat/sub-fslAchieva03_T1w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-fslAchieva03/anat/sub-fslAchieva03_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-fslAchieva03/anat/sub-fslAchieva03_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-fslAchieva03/anat/sub-fslAchieva03_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-fslAchieva03/anat/sub-fslAchieva03_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-fslAchieva03/anat/sub-fslAchieva03_T2star_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-fslAchieva03/anat/sub-fslAchieva03_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-fslAchieva03/anat/sub-fslAchieva03_T2star_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-fslAchieva03/anat/sub-fslAchieva03_space-other_T2w_label-discs_dlabel.json b/derivatives/labels/sub-fslAchieva03/anat/sub-fslAchieva03_T2w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-fslAchieva03/anat/sub-fslAchieva03_space-other_T2w_label-discs_dlabel.json rename to derivatives/labels/sub-fslAchieva03/anat/sub-fslAchieva03_T2w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-fslAchieva03/anat/sub-fslAchieva03_space-other_T2w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-fslAchieva03/anat/sub-fslAchieva03_T2w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-fslAchieva03/anat/sub-fslAchieva03_space-other_T2w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-fslAchieva03/anat/sub-fslAchieva03_T2w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-fslAchieva03/anat/sub-fslAchieva03_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-fslAchieva03/anat/sub-fslAchieva03_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-fslAchieva03/anat/sub-fslAchieva03_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-fslAchieva03/anat/sub-fslAchieva03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-fslAchieva03/anat/sub-fslAchieva03_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-fslAchieva03/anat/sub-fslAchieva03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-fslAchieva03/anat/sub-fslAchieva03_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-fslAchieva03/anat/sub-fslAchieva03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-fslAchieva03/anat/sub-fslAchieva03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-fslAchieva03/anat/sub-fslAchieva03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-fslAchieva03/anat/sub-fslAchieva03_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-fslAchieva03/anat/sub-fslAchieva03_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-fslAchieva03/anat/sub-fslAchieva03_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-fslAchieva03/anat/sub-fslAchieva03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-fslAchieva03/anat/sub-fslAchieva03_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-fslAchieva03/anat/sub-fslAchieva03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-fslAchieva03/anat/sub-fslAchieva03_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-fslAchieva03/anat/sub-fslAchieva03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-fslAchieva03/anat/sub-fslAchieva03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-fslAchieva03/anat/sub-fslAchieva03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-fslAchieva03/anat/sub-fslAchieva03_space-other_T2star_label-SC_seg.nii.gz b/derivatives/labels/sub-fslAchieva03/anat/sub-fslAchieva03_space-other_T2star_label-SC_seg.nii.gz index b206d06504..4300500241 100644 --- a/derivatives/labels/sub-fslAchieva03/anat/sub-fslAchieva03_space-other_T2star_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-fslAchieva03/anat/sub-fslAchieva03_space-other_T2star_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s8161--b9443ac8435c2cdc6c55a2db8228f0231945e58a22082b16239e157ce44c3d2f.nii.gz +/annex/objects/SHA256E-s8182--92e1f52d266bdf4574ae2d2a22c0e9fc0f504f2eb5acf5da394881f581d02d90.nii.gz diff --git a/derivatives/labels/sub-fslAchieva03/anat/sub-fslAchieva03_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-fslAchieva03/anat/sub-fslAchieva03_space-other_T2star_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-fslAchieva03/anat/sub-fslAchieva03_space-other_T2star_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-fslAchieva04/anat/sub-fslAchieva04_space-other_T1w_label-discs_dlabel.json b/derivatives/labels/sub-fslAchieva04/anat/sub-fslAchieva04_T1w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-fslAchieva04/anat/sub-fslAchieva04_space-other_T1w_label-discs_dlabel.json rename to derivatives/labels/sub-fslAchieva04/anat/sub-fslAchieva04_T1w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-fslAchieva04/anat/sub-fslAchieva04_space-other_T1w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-fslAchieva04/anat/sub-fslAchieva04_T1w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-fslAchieva04/anat/sub-fslAchieva04_space-other_T1w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-fslAchieva04/anat/sub-fslAchieva04_T1w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-fslAchieva04/anat/sub-fslAchieva04_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-fslAchieva04/anat/sub-fslAchieva04_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-fslAchieva04/anat/sub-fslAchieva04_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-fslAchieva04/anat/sub-fslAchieva04_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-fslAchieva04/anat/sub-fslAchieva04_T2star_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-fslAchieva04/anat/sub-fslAchieva04_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-fslAchieva04/anat/sub-fslAchieva04_T2star_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-fslAchieva04/anat/sub-fslAchieva04_space-other_T2w_label-discs_dlabel.json b/derivatives/labels/sub-fslAchieva04/anat/sub-fslAchieva04_T2w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-fslAchieva04/anat/sub-fslAchieva04_space-other_T2w_label-discs_dlabel.json rename to derivatives/labels/sub-fslAchieva04/anat/sub-fslAchieva04_T2w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-fslAchieva04/anat/sub-fslAchieva04_space-other_T2w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-fslAchieva04/anat/sub-fslAchieva04_T2w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-fslAchieva04/anat/sub-fslAchieva04_space-other_T2w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-fslAchieva04/anat/sub-fslAchieva04_T2w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-fslAchieva04/anat/sub-fslAchieva04_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-fslAchieva04/anat/sub-fslAchieva04_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-fslAchieva04/anat/sub-fslAchieva04_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-fslAchieva04/anat/sub-fslAchieva04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-fslAchieva04/anat/sub-fslAchieva04_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-fslAchieva04/anat/sub-fslAchieva04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-fslAchieva04/anat/sub-fslAchieva04_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-fslAchieva04/anat/sub-fslAchieva04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-fslAchieva04/anat/sub-fslAchieva04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-fslAchieva04/anat/sub-fslAchieva04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-fslAchieva04/anat/sub-fslAchieva04_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-fslAchieva04/anat/sub-fslAchieva04_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-fslAchieva04/anat/sub-fslAchieva04_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-fslAchieva04/anat/sub-fslAchieva04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-fslAchieva04/anat/sub-fslAchieva04_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-fslAchieva04/anat/sub-fslAchieva04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-fslAchieva04/anat/sub-fslAchieva04_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-fslAchieva04/anat/sub-fslAchieva04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-fslAchieva04/anat/sub-fslAchieva04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-fslAchieva04/anat/sub-fslAchieva04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-fslAchieva04/anat/sub-fslAchieva04_space-other_T2star_gmlabel-SC_seg.nii.gz b/derivatives/labels/sub-fslAchieva04/anat/sub-fslAchieva04_space-other_T2star_gmlabel-SC_seg.nii.gz index 38339244f6..7a4bb6e0c6 100644 --- a/derivatives/labels/sub-fslAchieva04/anat/sub-fslAchieva04_space-other_T2star_gmlabel-SC_seg.nii.gz +++ b/derivatives/labels/sub-fslAchieva04/anat/sub-fslAchieva04_space-other_T2star_gmlabel-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s14122--d030b1f1159d22bc8076f1d228079b8d55d0fd61f5735dbfa1ee40792579070d.nii.gz +/annex/objects/SHA256E-s14143--8d6f87e0481a00da2e96a34a4799656f160a95aa9b4afea793ac5d13ec4dc388.nii.gz diff --git a/derivatives/labels/sub-fslAchieva04/anat/sub-fslAchieva04_space-other_T2star_label-SC_seg.nii.gz b/derivatives/labels/sub-fslAchieva04/anat/sub-fslAchieva04_space-other_T2star_label-SC_seg.nii.gz index ab45703abb..32b364d761 100644 --- a/derivatives/labels/sub-fslAchieva04/anat/sub-fslAchieva04_space-other_T2star_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-fslAchieva04/anat/sub-fslAchieva04_space-other_T2star_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s3969--67a495ea06e314f5ac60c980b2c4c0639ddeef25e6f6b2859085b8672ea7a6fa.nii.gz +/annex/objects/SHA256E-s15501--c9ca33b3b293001c3635541d3b5dfc7116659280dfaa98be23c581973b9127d6.nii.gz diff --git a/derivatives/labels/sub-fslAchieva04/anat/sub-fslAchieva04_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-fslAchieva04/anat/sub-fslAchieva04_space-other_T2star_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-fslAchieva04/anat/sub-fslAchieva04_space-other_T2star_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-fslAchieva05/anat/sub-fslAchieva05_space-other_T1w_label-discs_dlabel.json b/derivatives/labels/sub-fslAchieva05/anat/sub-fslAchieva05_T1w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-fslAchieva05/anat/sub-fslAchieva05_space-other_T1w_label-discs_dlabel.json rename to derivatives/labels/sub-fslAchieva05/anat/sub-fslAchieva05_T1w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-fslAchieva05/anat/sub-fslAchieva05_space-other_T1w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-fslAchieva05/anat/sub-fslAchieva05_T1w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-fslAchieva05/anat/sub-fslAchieva05_space-other_T1w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-fslAchieva05/anat/sub-fslAchieva05_T1w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-fslAchieva05/anat/sub-fslAchieva05_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-fslAchieva05/anat/sub-fslAchieva05_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-fslAchieva05/anat/sub-fslAchieva05_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-fslAchieva05/anat/sub-fslAchieva05_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-fslAchieva05/anat/sub-fslAchieva05_T2star_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-fslAchieva05/anat/sub-fslAchieva05_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-fslAchieva05/anat/sub-fslAchieva05_T2star_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-fslAchieva05/anat/sub-fslAchieva05_space-other_T2w_label-discs_dlabel.json b/derivatives/labels/sub-fslAchieva05/anat/sub-fslAchieva05_T2w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-fslAchieva05/anat/sub-fslAchieva05_space-other_T2w_label-discs_dlabel.json rename to derivatives/labels/sub-fslAchieva05/anat/sub-fslAchieva05_T2w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-fslAchieva05/anat/sub-fslAchieva05_space-other_T2w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-fslAchieva05/anat/sub-fslAchieva05_T2w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-fslAchieva05/anat/sub-fslAchieva05_space-other_T2w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-fslAchieva05/anat/sub-fslAchieva05_T2w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-fslAchieva05/anat/sub-fslAchieva05_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-fslAchieva05/anat/sub-fslAchieva05_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-fslAchieva05/anat/sub-fslAchieva05_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-fslAchieva05/anat/sub-fslAchieva05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-fslAchieva05/anat/sub-fslAchieva05_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-fslAchieva05/anat/sub-fslAchieva05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-fslAchieva05/anat/sub-fslAchieva05_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-fslAchieva05/anat/sub-fslAchieva05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-fslAchieva05/anat/sub-fslAchieva05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-fslAchieva05/anat/sub-fslAchieva05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-fslAchieva05/anat/sub-fslAchieva05_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-fslAchieva05/anat/sub-fslAchieva05_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-fslAchieva05/anat/sub-fslAchieva05_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-fslAchieva05/anat/sub-fslAchieva05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-fslAchieva05/anat/sub-fslAchieva05_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-fslAchieva05/anat/sub-fslAchieva05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-fslAchieva05/anat/sub-fslAchieva05_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-fslAchieva05/anat/sub-fslAchieva05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-fslAchieva05/anat/sub-fslAchieva05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-fslAchieva05/anat/sub-fslAchieva05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-fslAchieva05/anat/sub-fslAchieva05_space-other_T2star_label-SC_seg.nii.gz b/derivatives/labels/sub-fslAchieva05/anat/sub-fslAchieva05_space-other_T2star_label-SC_seg.nii.gz index ea84863ecf..2dace58b4c 100644 --- a/derivatives/labels/sub-fslAchieva05/anat/sub-fslAchieva05_space-other_T2star_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-fslAchieva05/anat/sub-fslAchieva05_space-other_T2star_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s8229--1c3bbeb6f267a8ffeb07f55dfcf29ccb4dd5a22b9783fe187c99b110e64b02a6.nii.gz +/annex/objects/SHA256E-s8250--d82298fcea668eb2aae0c8c855baa2d9b5f77c06ea691a41a809a58db062f5af.nii.gz diff --git a/derivatives/labels/sub-fslAchieva05/anat/sub-fslAchieva05_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-fslAchieva05/anat/sub-fslAchieva05_space-other_T2star_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-fslAchieva05/anat/sub-fslAchieva05_space-other_T2star_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-fslAchieva06/anat/sub-fslAchieva06_space-other_T1w_label-discs_dlabel.json b/derivatives/labels/sub-fslAchieva06/anat/sub-fslAchieva06_T1w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-fslAchieva06/anat/sub-fslAchieva06_space-other_T1w_label-discs_dlabel.json rename to derivatives/labels/sub-fslAchieva06/anat/sub-fslAchieva06_T1w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-fslAchieva06/anat/sub-fslAchieva06_space-other_T1w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-fslAchieva06/anat/sub-fslAchieva06_T1w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-fslAchieva06/anat/sub-fslAchieva06_space-other_T1w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-fslAchieva06/anat/sub-fslAchieva06_T1w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-fslAchieva06/anat/sub-fslAchieva06_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-fslAchieva06/anat/sub-fslAchieva06_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-fslAchieva06/anat/sub-fslAchieva06_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-fslAchieva06/anat/sub-fslAchieva06_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-fslAchieva06/anat/sub-fslAchieva06_T2star_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-fslAchieva06/anat/sub-fslAchieva06_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-fslAchieva06/anat/sub-fslAchieva06_T2star_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-fslAchieva06/anat/sub-fslAchieva06_space-other_T2w_label-discs_dlabel.json b/derivatives/labels/sub-fslAchieva06/anat/sub-fslAchieva06_T2w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-fslAchieva06/anat/sub-fslAchieva06_space-other_T2w_label-discs_dlabel.json rename to derivatives/labels/sub-fslAchieva06/anat/sub-fslAchieva06_T2w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-fslAchieva06/anat/sub-fslAchieva06_space-other_T2w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-fslAchieva06/anat/sub-fslAchieva06_T2w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-fslAchieva06/anat/sub-fslAchieva06_space-other_T2w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-fslAchieva06/anat/sub-fslAchieva06_T2w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-fslAchieva06/anat/sub-fslAchieva06_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-fslAchieva06/anat/sub-fslAchieva06_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-fslAchieva06/anat/sub-fslAchieva06_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-fslAchieva06/anat/sub-fslAchieva06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-fslAchieva06/anat/sub-fslAchieva06_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-fslAchieva06/anat/sub-fslAchieva06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-fslAchieva06/anat/sub-fslAchieva06_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-fslAchieva06/anat/sub-fslAchieva06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-fslAchieva06/anat/sub-fslAchieva06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-fslAchieva06/anat/sub-fslAchieva06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-fslAchieva06/anat/sub-fslAchieva06_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-fslAchieva06/anat/sub-fslAchieva06_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-fslAchieva06/anat/sub-fslAchieva06_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-fslAchieva06/anat/sub-fslAchieva06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-fslAchieva06/anat/sub-fslAchieva06_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-fslAchieva06/anat/sub-fslAchieva06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-fslAchieva06/anat/sub-fslAchieva06_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-fslAchieva06/anat/sub-fslAchieva06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-fslAchieva06/anat/sub-fslAchieva06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-fslAchieva06/anat/sub-fslAchieva06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-fslAchieva06/anat/sub-fslAchieva06_space-other_T2star_label-SC_seg.nii.gz b/derivatives/labels/sub-fslAchieva06/anat/sub-fslAchieva06_space-other_T2star_label-SC_seg.nii.gz index b4056c13d2..3a8086179c 100644 --- a/derivatives/labels/sub-fslAchieva06/anat/sub-fslAchieva06_space-other_T2star_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-fslAchieva06/anat/sub-fslAchieva06_space-other_T2star_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s8405--2faa94d5953dca4d2f27e52144764d9ee2286f4ea3862497aec2f43fa0f3438c.nii.gz +/annex/objects/SHA256E-s8426--666e59da79e0d00f07bfaaa5351ac28e7ac773afd9a9763b3b396549dfdadaf8.nii.gz diff --git a/derivatives/labels/sub-fslAchieva06/anat/sub-fslAchieva06_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-fslAchieva06/anat/sub-fslAchieva06_space-other_T2star_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-fslAchieva06/anat/sub-fslAchieva06_space-other_T2star_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-fslPrisma01/anat/sub-fslPrisma01_space-other_T1w_label-discs_dlabel.json b/derivatives/labels/sub-fslPrisma01/anat/sub-fslPrisma01_T1w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-fslPrisma01/anat/sub-fslPrisma01_space-other_T1w_label-discs_dlabel.json rename to derivatives/labels/sub-fslPrisma01/anat/sub-fslPrisma01_T1w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-fslPrisma01/anat/sub-fslPrisma01_space-other_T1w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-fslPrisma01/anat/sub-fslPrisma01_T1w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-fslPrisma01/anat/sub-fslPrisma01_space-other_T1w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-fslPrisma01/anat/sub-fslPrisma01_T1w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-fslPrisma01/anat/sub-fslPrisma01_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-fslPrisma01/anat/sub-fslPrisma01_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-fslPrisma01/anat/sub-fslPrisma01_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-fslPrisma01/anat/sub-fslPrisma01_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-fslPrisma01/anat/sub-fslPrisma01_T2star_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-fslPrisma01/anat/sub-fslPrisma01_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-fslPrisma01/anat/sub-fslPrisma01_T2star_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-fslPrisma01/anat/sub-fslPrisma01_space-other_T2w_label-discs_dlabel.json b/derivatives/labels/sub-fslPrisma01/anat/sub-fslPrisma01_T2w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-fslPrisma01/anat/sub-fslPrisma01_space-other_T2w_label-discs_dlabel.json rename to derivatives/labels/sub-fslPrisma01/anat/sub-fslPrisma01_T2w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-fslPrisma01/anat/sub-fslPrisma01_space-other_T2w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-fslPrisma01/anat/sub-fslPrisma01_T2w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-fslPrisma01/anat/sub-fslPrisma01_space-other_T2w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-fslPrisma01/anat/sub-fslPrisma01_T2w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-fslPrisma01/anat/sub-fslPrisma01_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-fslPrisma01/anat/sub-fslPrisma01_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-fslPrisma01/anat/sub-fslPrisma01_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-fslPrisma01/anat/sub-fslPrisma01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-fslPrisma01/anat/sub-fslPrisma01_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-fslPrisma01/anat/sub-fslPrisma01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-fslPrisma01/anat/sub-fslPrisma01_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-fslPrisma01/anat/sub-fslPrisma01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-fslPrisma01/anat/sub-fslPrisma01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-fslPrisma01/anat/sub-fslPrisma01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-fslPrisma01/anat/sub-fslPrisma01_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-fslPrisma01/anat/sub-fslPrisma01_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-fslPrisma01/anat/sub-fslPrisma01_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-fslPrisma01/anat/sub-fslPrisma01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-fslPrisma01/anat/sub-fslPrisma01_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-fslPrisma01/anat/sub-fslPrisma01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-fslPrisma01/anat/sub-fslPrisma01_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-fslPrisma01/anat/sub-fslPrisma01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-fslPrisma01/anat/sub-fslPrisma01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-fslPrisma01/anat/sub-fslPrisma01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-fslPrisma01/anat/sub-fslPrisma01_space-other_T2star_label-SC_seg.nii.gz b/derivatives/labels/sub-fslPrisma01/anat/sub-fslPrisma01_space-other_T2star_label-SC_seg.nii.gz index 88afe40cc2..bde9eea6fc 100644 --- a/derivatives/labels/sub-fslPrisma01/anat/sub-fslPrisma01_space-other_T2star_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-fslPrisma01/anat/sub-fslPrisma01_space-other_T2star_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s14926--4d6f1c9164fded0181383a249a8f234da7a9970a2b383f38fa3e4004d936b3ef.nii.gz +/annex/objects/SHA256E-s14947--a24ac4da515ab61e5ce09d49ca1ac10875484eb6c0ccb43c01aefdae4d7eb572.nii.gz diff --git a/derivatives/labels/sub-fslPrisma01/anat/sub-fslPrisma01_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-fslPrisma01/anat/sub-fslPrisma01_space-other_T2star_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-fslPrisma01/anat/sub-fslPrisma01_space-other_T2star_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-fslPrisma02/anat/sub-fslPrisma02_space-other_T1w_label-discs_dlabel.json b/derivatives/labels/sub-fslPrisma02/anat/sub-fslPrisma02_T1w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-fslPrisma02/anat/sub-fslPrisma02_space-other_T1w_label-discs_dlabel.json rename to derivatives/labels/sub-fslPrisma02/anat/sub-fslPrisma02_T1w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-fslPrisma02/anat/sub-fslPrisma02_space-other_T1w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-fslPrisma02/anat/sub-fslPrisma02_T1w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-fslPrisma02/anat/sub-fslPrisma02_space-other_T1w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-fslPrisma02/anat/sub-fslPrisma02_T1w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-fslPrisma02/anat/sub-fslPrisma02_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-fslPrisma02/anat/sub-fslPrisma02_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-fslPrisma02/anat/sub-fslPrisma02_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-fslPrisma02/anat/sub-fslPrisma02_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-fslPrisma02/anat/sub-fslPrisma02_T2star_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-fslPrisma02/anat/sub-fslPrisma02_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-fslPrisma02/anat/sub-fslPrisma02_T2star_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-fslPrisma02/anat/sub-fslPrisma02_space-other_T2w_label-discs_dlabel.json b/derivatives/labels/sub-fslPrisma02/anat/sub-fslPrisma02_T2w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-fslPrisma02/anat/sub-fslPrisma02_space-other_T2w_label-discs_dlabel.json rename to derivatives/labels/sub-fslPrisma02/anat/sub-fslPrisma02_T2w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-fslPrisma02/anat/sub-fslPrisma02_space-other_T2w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-fslPrisma02/anat/sub-fslPrisma02_T2w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-fslPrisma02/anat/sub-fslPrisma02_space-other_T2w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-fslPrisma02/anat/sub-fslPrisma02_T2w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-fslPrisma02/anat/sub-fslPrisma02_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-fslPrisma02/anat/sub-fslPrisma02_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-fslPrisma02/anat/sub-fslPrisma02_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-fslPrisma02/anat/sub-fslPrisma02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-fslPrisma02/anat/sub-fslPrisma02_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-fslPrisma02/anat/sub-fslPrisma02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-fslPrisma02/anat/sub-fslPrisma02_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-fslPrisma02/anat/sub-fslPrisma02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-fslPrisma02/anat/sub-fslPrisma02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-fslPrisma02/anat/sub-fslPrisma02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-fslPrisma02/anat/sub-fslPrisma02_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-fslPrisma02/anat/sub-fslPrisma02_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-fslPrisma02/anat/sub-fslPrisma02_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-fslPrisma02/anat/sub-fslPrisma02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-fslPrisma02/anat/sub-fslPrisma02_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-fslPrisma02/anat/sub-fslPrisma02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-fslPrisma02/anat/sub-fslPrisma02_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-fslPrisma02/anat/sub-fslPrisma02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-fslPrisma02/anat/sub-fslPrisma02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-fslPrisma02/anat/sub-fslPrisma02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-fslPrisma02/anat/sub-fslPrisma02_space-other_T2star_label-SC_seg.nii.gz b/derivatives/labels/sub-fslPrisma02/anat/sub-fslPrisma02_space-other_T2star_label-SC_seg.nii.gz index e89fde4208..8593133133 100644 --- a/derivatives/labels/sub-fslPrisma02/anat/sub-fslPrisma02_space-other_T2star_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-fslPrisma02/anat/sub-fslPrisma02_space-other_T2star_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s14925--04636ec15b17267e07dad85dd43daca1c5c14093c0b71a4a5c2949ee71bfeb91.nii.gz +/annex/objects/SHA256E-s14946--64f3300c716e4b5e28f19db5acbdaa11f9b22a377411598124ee61859982f5df.nii.gz diff --git a/derivatives/labels/sub-fslPrisma02/anat/sub-fslPrisma02_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-fslPrisma02/anat/sub-fslPrisma02_space-other_T2star_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-fslPrisma02/anat/sub-fslPrisma02_space-other_T2star_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-fslPrisma03/anat/sub-fslPrisma03_space-other_T1w_label-discs_dlabel.json b/derivatives/labels/sub-fslPrisma03/anat/sub-fslPrisma03_T1w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-fslPrisma03/anat/sub-fslPrisma03_space-other_T1w_label-discs_dlabel.json rename to derivatives/labels/sub-fslPrisma03/anat/sub-fslPrisma03_T1w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-fslPrisma03/anat/sub-fslPrisma03_space-other_T1w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-fslPrisma03/anat/sub-fslPrisma03_T1w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-fslPrisma03/anat/sub-fslPrisma03_space-other_T1w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-fslPrisma03/anat/sub-fslPrisma03_T1w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-fslPrisma03/anat/sub-fslPrisma03_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-fslPrisma03/anat/sub-fslPrisma03_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-fslPrisma03/anat/sub-fslPrisma03_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-fslPrisma03/anat/sub-fslPrisma03_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-fslPrisma03/anat/sub-fslPrisma03_T2star_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-fslPrisma03/anat/sub-fslPrisma03_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-fslPrisma03/anat/sub-fslPrisma03_T2star_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-fslPrisma03/anat/sub-fslPrisma03_space-other_T2w_label-discs_dlabel.json b/derivatives/labels/sub-fslPrisma03/anat/sub-fslPrisma03_T2w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-fslPrisma03/anat/sub-fslPrisma03_space-other_T2w_label-discs_dlabel.json rename to derivatives/labels/sub-fslPrisma03/anat/sub-fslPrisma03_T2w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-fslPrisma03/anat/sub-fslPrisma03_space-other_T2w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-fslPrisma03/anat/sub-fslPrisma03_T2w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-fslPrisma03/anat/sub-fslPrisma03_space-other_T2w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-fslPrisma03/anat/sub-fslPrisma03_T2w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-fslPrisma03/anat/sub-fslPrisma03_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-fslPrisma03/anat/sub-fslPrisma03_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-fslPrisma03/anat/sub-fslPrisma03_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-fslPrisma03/anat/sub-fslPrisma03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-fslPrisma03/anat/sub-fslPrisma03_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-fslPrisma03/anat/sub-fslPrisma03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-fslPrisma03/anat/sub-fslPrisma03_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-fslPrisma03/anat/sub-fslPrisma03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-fslPrisma03/anat/sub-fslPrisma03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-fslPrisma03/anat/sub-fslPrisma03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-fslPrisma03/anat/sub-fslPrisma03_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-fslPrisma03/anat/sub-fslPrisma03_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-fslPrisma03/anat/sub-fslPrisma03_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-fslPrisma03/anat/sub-fslPrisma03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-fslPrisma03/anat/sub-fslPrisma03_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-fslPrisma03/anat/sub-fslPrisma03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-fslPrisma03/anat/sub-fslPrisma03_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-fslPrisma03/anat/sub-fslPrisma03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-fslPrisma03/anat/sub-fslPrisma03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-fslPrisma03/anat/sub-fslPrisma03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-fslPrisma03/anat/sub-fslPrisma03_space-other_T2star_label-SC_seg.nii.gz b/derivatives/labels/sub-fslPrisma03/anat/sub-fslPrisma03_space-other_T2star_label-SC_seg.nii.gz index c2e434cc59..cc48e0e99a 100644 --- a/derivatives/labels/sub-fslPrisma03/anat/sub-fslPrisma03_space-other_T2star_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-fslPrisma03/anat/sub-fslPrisma03_space-other_T2star_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s6890--e44afcc842031370287ae8102129d5b315bab46bb7c5647cfcc795b80a14e6b9.nii.gz +/annex/objects/SHA256E-s28553--a21df2e42840986f72316aa4cdb8d6d7406772a3a30d121c14b4c79af9191897.nii.gz diff --git a/derivatives/labels/sub-fslPrisma03/anat/sub-fslPrisma03_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-fslPrisma03/anat/sub-fslPrisma03_space-other_T2star_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-fslPrisma03/anat/sub-fslPrisma03_space-other_T2star_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-fslPrisma04/anat/sub-fslPrisma04_space-other_T1w_label-discs_dlabel.json b/derivatives/labels/sub-fslPrisma04/anat/sub-fslPrisma04_T1w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-fslPrisma04/anat/sub-fslPrisma04_space-other_T1w_label-discs_dlabel.json rename to derivatives/labels/sub-fslPrisma04/anat/sub-fslPrisma04_T1w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-fslPrisma04/anat/sub-fslPrisma04_space-other_T1w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-fslPrisma04/anat/sub-fslPrisma04_T1w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-fslPrisma04/anat/sub-fslPrisma04_space-other_T1w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-fslPrisma04/anat/sub-fslPrisma04_T1w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-fslPrisma04/anat/sub-fslPrisma04_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-fslPrisma04/anat/sub-fslPrisma04_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-fslPrisma04/anat/sub-fslPrisma04_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-fslPrisma04/anat/sub-fslPrisma04_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-fslPrisma04/anat/sub-fslPrisma04_T2star_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-fslPrisma04/anat/sub-fslPrisma04_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-fslPrisma04/anat/sub-fslPrisma04_T2star_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-fslPrisma04/anat/sub-fslPrisma04_space-other_T2w_label-discs_dlabel.json b/derivatives/labels/sub-fslPrisma04/anat/sub-fslPrisma04_T2w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-fslPrisma04/anat/sub-fslPrisma04_space-other_T2w_label-discs_dlabel.json rename to derivatives/labels/sub-fslPrisma04/anat/sub-fslPrisma04_T2w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-fslPrisma04/anat/sub-fslPrisma04_space-other_T2w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-fslPrisma04/anat/sub-fslPrisma04_T2w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-fslPrisma04/anat/sub-fslPrisma04_space-other_T2w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-fslPrisma04/anat/sub-fslPrisma04_T2w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-fslPrisma04/anat/sub-fslPrisma04_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-fslPrisma04/anat/sub-fslPrisma04_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-fslPrisma04/anat/sub-fslPrisma04_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-fslPrisma04/anat/sub-fslPrisma04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-fslPrisma04/anat/sub-fslPrisma04_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-fslPrisma04/anat/sub-fslPrisma04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-fslPrisma04/anat/sub-fslPrisma04_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-fslPrisma04/anat/sub-fslPrisma04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-fslPrisma04/anat/sub-fslPrisma04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-fslPrisma04/anat/sub-fslPrisma04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-fslPrisma04/anat/sub-fslPrisma04_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-fslPrisma04/anat/sub-fslPrisma04_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-fslPrisma04/anat/sub-fslPrisma04_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-fslPrisma04/anat/sub-fslPrisma04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-fslPrisma04/anat/sub-fslPrisma04_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-fslPrisma04/anat/sub-fslPrisma04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-fslPrisma04/anat/sub-fslPrisma04_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-fslPrisma04/anat/sub-fslPrisma04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-fslPrisma04/anat/sub-fslPrisma04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-fslPrisma04/anat/sub-fslPrisma04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-fslPrisma04/anat/sub-fslPrisma04_space-other_T2star_label-SC_seg.nii.gz b/derivatives/labels/sub-fslPrisma04/anat/sub-fslPrisma04_space-other_T2star_label-SC_seg.nii.gz index e0b86f4919..733afd7e8c 100644 --- a/derivatives/labels/sub-fslPrisma04/anat/sub-fslPrisma04_space-other_T2star_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-fslPrisma04/anat/sub-fslPrisma04_space-other_T2star_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s15054--352ea1333f154b5c9b57ff6ad8c51a786fdeec043558f5de560af30d713d5104.nii.gz +/annex/objects/SHA256E-s15075--05a67103e4a8011e084df5b01aed7cff30165adaa1dd6c6c7598376e950563ef.nii.gz diff --git a/derivatives/labels/sub-fslPrisma04/anat/sub-fslPrisma04_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-fslPrisma04/anat/sub-fslPrisma04_space-other_T2star_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-fslPrisma04/anat/sub-fslPrisma04_space-other_T2star_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-fslPrisma05/anat/sub-fslPrisma05_space-other_T1w_label-discs_dlabel.json b/derivatives/labels/sub-fslPrisma05/anat/sub-fslPrisma05_T1w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-fslPrisma05/anat/sub-fslPrisma05_space-other_T1w_label-discs_dlabel.json rename to derivatives/labels/sub-fslPrisma05/anat/sub-fslPrisma05_T1w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-fslPrisma05/anat/sub-fslPrisma05_space-other_T1w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-fslPrisma05/anat/sub-fslPrisma05_T1w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-fslPrisma05/anat/sub-fslPrisma05_space-other_T1w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-fslPrisma05/anat/sub-fslPrisma05_T1w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-fslPrisma05/anat/sub-fslPrisma05_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-fslPrisma05/anat/sub-fslPrisma05_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-fslPrisma05/anat/sub-fslPrisma05_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-fslPrisma05/anat/sub-fslPrisma05_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-fslPrisma05/anat/sub-fslPrisma05_T2star_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-fslPrisma05/anat/sub-fslPrisma05_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-fslPrisma05/anat/sub-fslPrisma05_T2star_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-fslPrisma05/anat/sub-fslPrisma05_space-other_T2w_label-discs_dlabel.json b/derivatives/labels/sub-fslPrisma05/anat/sub-fslPrisma05_T2w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-fslPrisma05/anat/sub-fslPrisma05_space-other_T2w_label-discs_dlabel.json rename to derivatives/labels/sub-fslPrisma05/anat/sub-fslPrisma05_T2w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-fslPrisma05/anat/sub-fslPrisma05_space-other_T2w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-fslPrisma05/anat/sub-fslPrisma05_T2w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-fslPrisma05/anat/sub-fslPrisma05_space-other_T2w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-fslPrisma05/anat/sub-fslPrisma05_T2w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-fslPrisma05/anat/sub-fslPrisma05_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-fslPrisma05/anat/sub-fslPrisma05_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-fslPrisma05/anat/sub-fslPrisma05_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-fslPrisma05/anat/sub-fslPrisma05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-fslPrisma05/anat/sub-fslPrisma05_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-fslPrisma05/anat/sub-fslPrisma05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-fslPrisma05/anat/sub-fslPrisma05_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-fslPrisma05/anat/sub-fslPrisma05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-fslPrisma05/anat/sub-fslPrisma05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-fslPrisma05/anat/sub-fslPrisma05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-fslPrisma05/anat/sub-fslPrisma05_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-fslPrisma05/anat/sub-fslPrisma05_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-fslPrisma05/anat/sub-fslPrisma05_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-fslPrisma05/anat/sub-fslPrisma05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-fslPrisma05/anat/sub-fslPrisma05_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-fslPrisma05/anat/sub-fslPrisma05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-fslPrisma05/anat/sub-fslPrisma05_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-fslPrisma05/anat/sub-fslPrisma05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-fslPrisma05/anat/sub-fslPrisma05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-fslPrisma05/anat/sub-fslPrisma05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-fslPrisma05/anat/sub-fslPrisma05_space-other_T2star_label-SC_seg.nii.gz b/derivatives/labels/sub-fslPrisma05/anat/sub-fslPrisma05_space-other_T2star_label-SC_seg.nii.gz index c3d23ef745..61922021dd 100644 --- a/derivatives/labels/sub-fslPrisma05/anat/sub-fslPrisma05_space-other_T2star_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-fslPrisma05/anat/sub-fslPrisma05_space-other_T2star_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s14772--37a29e57b10c7f7e0ac946a49ea88abf8ebcfb82a79fe0b88c1e0aa07e1f0332.nii.gz +/annex/objects/SHA256E-s14793--7c515bf36a2a56736deca4adea286f9a25a8aa9796e7bd7fcc365559dda82ff2.nii.gz diff --git a/derivatives/labels/sub-fslPrisma05/anat/sub-fslPrisma05_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-fslPrisma05/anat/sub-fslPrisma05_space-other_T2star_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-fslPrisma05/anat/sub-fslPrisma05_space-other_T2star_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-fslPrisma06/anat/sub-fslPrisma06_space-other_T1w_label-discs_dlabel.json b/derivatives/labels/sub-fslPrisma06/anat/sub-fslPrisma06_T1w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-fslPrisma06/anat/sub-fslPrisma06_space-other_T1w_label-discs_dlabel.json rename to derivatives/labels/sub-fslPrisma06/anat/sub-fslPrisma06_T1w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-fslPrisma06/anat/sub-fslPrisma06_space-other_T1w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-fslPrisma06/anat/sub-fslPrisma06_T1w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-fslPrisma06/anat/sub-fslPrisma06_space-other_T1w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-fslPrisma06/anat/sub-fslPrisma06_T1w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-fslPrisma06/anat/sub-fslPrisma06_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-fslPrisma06/anat/sub-fslPrisma06_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-fslPrisma06/anat/sub-fslPrisma06_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-fslPrisma06/anat/sub-fslPrisma06_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-fslPrisma06/anat/sub-fslPrisma06_T2star_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-fslPrisma06/anat/sub-fslPrisma06_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-fslPrisma06/anat/sub-fslPrisma06_T2star_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-fslPrisma06/anat/sub-fslPrisma06_space-other_T2w_label-discs_dlabel.json b/derivatives/labels/sub-fslPrisma06/anat/sub-fslPrisma06_T2w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-fslPrisma06/anat/sub-fslPrisma06_space-other_T2w_label-discs_dlabel.json rename to derivatives/labels/sub-fslPrisma06/anat/sub-fslPrisma06_T2w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-fslPrisma06/anat/sub-fslPrisma06_space-other_T2w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-fslPrisma06/anat/sub-fslPrisma06_T2w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-fslPrisma06/anat/sub-fslPrisma06_space-other_T2w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-fslPrisma06/anat/sub-fslPrisma06_T2w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-fslPrisma06/anat/sub-fslPrisma06_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-fslPrisma06/anat/sub-fslPrisma06_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-fslPrisma06/anat/sub-fslPrisma06_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-fslPrisma06/anat/sub-fslPrisma06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-fslPrisma06/anat/sub-fslPrisma06_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-fslPrisma06/anat/sub-fslPrisma06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-fslPrisma06/anat/sub-fslPrisma06_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-fslPrisma06/anat/sub-fslPrisma06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-fslPrisma06/anat/sub-fslPrisma06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-fslPrisma06/anat/sub-fslPrisma06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-fslPrisma06/anat/sub-fslPrisma06_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-fslPrisma06/anat/sub-fslPrisma06_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-fslPrisma06/anat/sub-fslPrisma06_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-fslPrisma06/anat/sub-fslPrisma06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-fslPrisma06/anat/sub-fslPrisma06_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-fslPrisma06/anat/sub-fslPrisma06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-fslPrisma06/anat/sub-fslPrisma06_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-fslPrisma06/anat/sub-fslPrisma06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-fslPrisma06/anat/sub-fslPrisma06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-fslPrisma06/anat/sub-fslPrisma06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-fslPrisma06/anat/sub-fslPrisma06_space-other_T2star_label-SC_seg.nii.gz b/derivatives/labels/sub-fslPrisma06/anat/sub-fslPrisma06_space-other_T2star_label-SC_seg.nii.gz index e3aeaf8803..87f2307b1d 100644 --- a/derivatives/labels/sub-fslPrisma06/anat/sub-fslPrisma06_space-other_T2star_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-fslPrisma06/anat/sub-fslPrisma06_space-other_T2star_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s6815--c5cedb18d84cf0d5fd3c650bbc31a61671cacf90fe7fec847ad82ddf24689f93.nii.gz +/annex/objects/SHA256E-s28392--8b2a9cfeef31f4fdd78355da393ce7e74754b6fb6401aa41303bf988d13d3c26.nii.gz diff --git a/derivatives/labels/sub-fslPrisma06/anat/sub-fslPrisma06_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-fslPrisma06/anat/sub-fslPrisma06_space-other_T2star_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-fslPrisma06/anat/sub-fslPrisma06_space-other_T2star_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-geneva01/anat/sub-geneva01_space-other_T1w_label-discs_dlabel.json b/derivatives/labels/sub-geneva01/anat/sub-geneva01_T1w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-geneva01/anat/sub-geneva01_space-other_T1w_label-discs_dlabel.json rename to derivatives/labels/sub-geneva01/anat/sub-geneva01_T1w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-geneva01/anat/sub-geneva01_space-other_T1w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-geneva01/anat/sub-geneva01_T1w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-geneva01/anat/sub-geneva01_space-other_T1w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-geneva01/anat/sub-geneva01_T1w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-geneva01/anat/sub-geneva01_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-geneva01/anat/sub-geneva01_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-geneva01/anat/sub-geneva01_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-geneva01/anat/sub-geneva01_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-geneva01/anat/sub-geneva01_T2star_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-geneva01/anat/sub-geneva01_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-geneva01/anat/sub-geneva01_T2star_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-geneva01/anat/sub-geneva01_space-other_T2w_label-discs_dlabel.json b/derivatives/labels/sub-geneva01/anat/sub-geneva01_T2w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-geneva01/anat/sub-geneva01_space-other_T2w_label-discs_dlabel.json rename to derivatives/labels/sub-geneva01/anat/sub-geneva01_T2w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-geneva01/anat/sub-geneva01_space-other_T2w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-geneva01/anat/sub-geneva01_T2w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-geneva01/anat/sub-geneva01_space-other_T2w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-geneva01/anat/sub-geneva01_T2w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-geneva01/anat/sub-geneva01_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-geneva01/anat/sub-geneva01_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-geneva01/anat/sub-geneva01_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-geneva01/anat/sub-geneva01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-geneva01/anat/sub-geneva01_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-geneva01/anat/sub-geneva01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-geneva01/anat/sub-geneva01_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-geneva01/anat/sub-geneva01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-geneva01/anat/sub-geneva01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-geneva01/anat/sub-geneva01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-geneva01/anat/sub-geneva01_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-geneva01/anat/sub-geneva01_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-geneva01/anat/sub-geneva01_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-geneva01/anat/sub-geneva01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-geneva01/anat/sub-geneva01_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-geneva01/anat/sub-geneva01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-geneva01/anat/sub-geneva01_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-geneva01/anat/sub-geneva01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-geneva01/anat/sub-geneva01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-geneva01/anat/sub-geneva01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-geneva01/anat/sub-geneva01_space-other_T2star_label-SC_seg.nii.gz b/derivatives/labels/sub-geneva01/anat/sub-geneva01_space-other_T2star_label-SC_seg.nii.gz index ff8b2902e8..ffc42bfad7 100644 --- a/derivatives/labels/sub-geneva01/anat/sub-geneva01_space-other_T2star_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-geneva01/anat/sub-geneva01_space-other_T2star_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s6778--f11ee82816633ff8ea15f8a2dda9279efa2462c6a0757476ccfc7ab030180869.nii.gz +/annex/objects/SHA256E-s28235--0a63f91aa0d506a8d32288a7865c563541f315d0a0a349b04d3be441515cc1fe.nii.gz diff --git a/derivatives/labels/sub-geneva01/anat/sub-geneva01_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-geneva01/anat/sub-geneva01_space-other_T2star_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-geneva01/anat/sub-geneva01_space-other_T2star_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-geneva02/anat/sub-geneva02_space-other_T1w_label-discs_dlabel.json b/derivatives/labels/sub-geneva02/anat/sub-geneva02_T1w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-geneva02/anat/sub-geneva02_space-other_T1w_label-discs_dlabel.json rename to derivatives/labels/sub-geneva02/anat/sub-geneva02_T1w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-geneva02/anat/sub-geneva02_space-other_T1w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-geneva02/anat/sub-geneva02_T1w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-geneva02/anat/sub-geneva02_space-other_T1w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-geneva02/anat/sub-geneva02_T1w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-geneva02/anat/sub-geneva02_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-geneva02/anat/sub-geneva02_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-geneva02/anat/sub-geneva02_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-geneva02/anat/sub-geneva02_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-geneva02/anat/sub-geneva02_T2star_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-geneva02/anat/sub-geneva02_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-geneva02/anat/sub-geneva02_T2star_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-geneva02/anat/sub-geneva02_space-other_T2w_label-discs_dlabel.json b/derivatives/labels/sub-geneva02/anat/sub-geneva02_T2w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-geneva02/anat/sub-geneva02_space-other_T2w_label-discs_dlabel.json rename to derivatives/labels/sub-geneva02/anat/sub-geneva02_T2w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-geneva02/anat/sub-geneva02_space-other_T2w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-geneva02/anat/sub-geneva02_T2w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-geneva02/anat/sub-geneva02_space-other_T2w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-geneva02/anat/sub-geneva02_T2w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-geneva02/anat/sub-geneva02_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-geneva02/anat/sub-geneva02_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-geneva02/anat/sub-geneva02_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-geneva02/anat/sub-geneva02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-geneva02/anat/sub-geneva02_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-geneva02/anat/sub-geneva02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-geneva02/anat/sub-geneva02_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-geneva02/anat/sub-geneva02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-geneva02/anat/sub-geneva02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-geneva02/anat/sub-geneva02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-geneva02/anat/sub-geneva02_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-geneva02/anat/sub-geneva02_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-geneva02/anat/sub-geneva02_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-geneva02/anat/sub-geneva02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-geneva02/anat/sub-geneva02_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-geneva02/anat/sub-geneva02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-geneva02/anat/sub-geneva02_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-geneva02/anat/sub-geneva02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-geneva02/anat/sub-geneva02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-geneva02/anat/sub-geneva02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-geneva02/anat/sub-geneva02_space-other_T2star_label-SC_seg.nii.gz b/derivatives/labels/sub-geneva02/anat/sub-geneva02_space-other_T2star_label-SC_seg.nii.gz index e8e9de19ef..e543829d54 100644 --- a/derivatives/labels/sub-geneva02/anat/sub-geneva02_space-other_T2star_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-geneva02/anat/sub-geneva02_space-other_T2star_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s6843--02467e5cd6d8f35e90cae0d7ea67c2de5a532e889552b985c8dc0129ee68ede7.nii.gz +/annex/objects/SHA256E-s28513--b92f946d0ca3a4d41238f98f3c2b1de8a4adad94b5111179c4650a195dc9dab1.nii.gz diff --git a/derivatives/labels/sub-geneva02/anat/sub-geneva02_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-geneva02/anat/sub-geneva02_space-other_T2star_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-geneva02/anat/sub-geneva02_space-other_T2star_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-geneva03/anat/sub-geneva03_space-other_T1w_label-discs_dlabel.json b/derivatives/labels/sub-geneva03/anat/sub-geneva03_T1w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-geneva03/anat/sub-geneva03_space-other_T1w_label-discs_dlabel.json rename to derivatives/labels/sub-geneva03/anat/sub-geneva03_T1w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-geneva03/anat/sub-geneva03_space-other_T1w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-geneva03/anat/sub-geneva03_T1w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-geneva03/anat/sub-geneva03_space-other_T1w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-geneva03/anat/sub-geneva03_T1w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-geneva03/anat/sub-geneva03_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-geneva03/anat/sub-geneva03_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-geneva03/anat/sub-geneva03_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-geneva03/anat/sub-geneva03_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-geneva03/anat/sub-geneva03_T2star_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-geneva03/anat/sub-geneva03_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-geneva03/anat/sub-geneva03_T2star_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-geneva03/anat/sub-geneva03_space-other_T2w_label-discs_dlabel.json b/derivatives/labels/sub-geneva03/anat/sub-geneva03_T2w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-geneva03/anat/sub-geneva03_space-other_T2w_label-discs_dlabel.json rename to derivatives/labels/sub-geneva03/anat/sub-geneva03_T2w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-geneva03/anat/sub-geneva03_space-other_T2w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-geneva03/anat/sub-geneva03_T2w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-geneva03/anat/sub-geneva03_space-other_T2w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-geneva03/anat/sub-geneva03_T2w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-geneva03/anat/sub-geneva03_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-geneva03/anat/sub-geneva03_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-geneva03/anat/sub-geneva03_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-geneva03/anat/sub-geneva03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-geneva03/anat/sub-geneva03_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-geneva03/anat/sub-geneva03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-geneva03/anat/sub-geneva03_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-geneva03/anat/sub-geneva03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-geneva03/anat/sub-geneva03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-geneva03/anat/sub-geneva03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-geneva03/anat/sub-geneva03_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-geneva03/anat/sub-geneva03_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-geneva03/anat/sub-geneva03_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-geneva03/anat/sub-geneva03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-geneva03/anat/sub-geneva03_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-geneva03/anat/sub-geneva03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-geneva03/anat/sub-geneva03_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-geneva03/anat/sub-geneva03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-geneva03/anat/sub-geneva03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-geneva03/anat/sub-geneva03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-geneva03/anat/sub-geneva03_space-other_T2star_label-SC_seg.nii.gz b/derivatives/labels/sub-geneva03/anat/sub-geneva03_space-other_T2star_label-SC_seg.nii.gz index c9aff1c995..b552133bc7 100644 --- a/derivatives/labels/sub-geneva03/anat/sub-geneva03_space-other_T2star_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-geneva03/anat/sub-geneva03_space-other_T2star_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s6898--7911117c488b8663b1a8f0c15e94dae75635aeccb3d2ff3c76293dd461cbc860.nii.gz +/annex/objects/SHA256E-s28555--47d1681505cbdeeaae72836227078f3caae9c20e9d33576db6aa6751eef21c32.nii.gz diff --git a/derivatives/labels/sub-geneva03/anat/sub-geneva03_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-geneva03/anat/sub-geneva03_space-other_T2star_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-geneva03/anat/sub-geneva03_space-other_T2star_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-geneva04/anat/sub-geneva04_space-other_T1w_label-discs_dlabel.json b/derivatives/labels/sub-geneva04/anat/sub-geneva04_T1w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-geneva04/anat/sub-geneva04_space-other_T1w_label-discs_dlabel.json rename to derivatives/labels/sub-geneva04/anat/sub-geneva04_T1w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-geneva04/anat/sub-geneva04_space-other_T1w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-geneva04/anat/sub-geneva04_T1w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-geneva04/anat/sub-geneva04_space-other_T1w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-geneva04/anat/sub-geneva04_T1w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-geneva04/anat/sub-geneva04_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-geneva04/anat/sub-geneva04_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-geneva04/anat/sub-geneva04_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-geneva04/anat/sub-geneva04_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-geneva04/anat/sub-geneva04_T2star_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-geneva04/anat/sub-geneva04_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-geneva04/anat/sub-geneva04_T2star_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-geneva04/anat/sub-geneva04_space-other_T2w_label-discs_dlabel.json b/derivatives/labels/sub-geneva04/anat/sub-geneva04_T2w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-geneva04/anat/sub-geneva04_space-other_T2w_label-discs_dlabel.json rename to derivatives/labels/sub-geneva04/anat/sub-geneva04_T2w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-geneva04/anat/sub-geneva04_space-other_T2w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-geneva04/anat/sub-geneva04_T2w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-geneva04/anat/sub-geneva04_space-other_T2w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-geneva04/anat/sub-geneva04_T2w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-geneva04/anat/sub-geneva04_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-geneva04/anat/sub-geneva04_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-geneva04/anat/sub-geneva04_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-geneva04/anat/sub-geneva04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-geneva04/anat/sub-geneva04_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-geneva04/anat/sub-geneva04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-geneva04/anat/sub-geneva04_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-geneva04/anat/sub-geneva04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-geneva04/anat/sub-geneva04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-geneva04/anat/sub-geneva04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-geneva04/anat/sub-geneva04_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-geneva04/anat/sub-geneva04_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-geneva04/anat/sub-geneva04_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-geneva04/anat/sub-geneva04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-geneva04/anat/sub-geneva04_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-geneva04/anat/sub-geneva04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-geneva04/anat/sub-geneva04_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-geneva04/anat/sub-geneva04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-geneva04/anat/sub-geneva04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-geneva04/anat/sub-geneva04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-geneva04/anat/sub-geneva04_space-other_T2star_label-SC_seg.nii.gz b/derivatives/labels/sub-geneva04/anat/sub-geneva04_space-other_T2star_label-SC_seg.nii.gz index 5299ba06af..3dbd3339b8 100644 --- a/derivatives/labels/sub-geneva04/anat/sub-geneva04_space-other_T2star_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-geneva04/anat/sub-geneva04_space-other_T2star_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s14886--a646d00ee35dbc70bb4e07c1d0213f987d2000312dc6f8c294b2f1bd73ff3175.nii.gz +/annex/objects/SHA256E-s14907--5ed4ad202b0cb882e390a366c120304dc8e75e051226123546af66402004a556.nii.gz diff --git a/derivatives/labels/sub-geneva04/anat/sub-geneva04_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-geneva04/anat/sub-geneva04_space-other_T2star_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-geneva04/anat/sub-geneva04_space-other_T2star_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-geneva04/anat/sub-geneva04_space-other_T2w_csflabel-SC_seg.json b/derivatives/labels/sub-geneva04/anat/sub-geneva04_space-other_T2w_label-CSF_seg.json similarity index 100% rename from derivatives/labels/sub-geneva04/anat/sub-geneva04_space-other_T2w_csflabel-SC_seg.json rename to derivatives/labels/sub-geneva04/anat/sub-geneva04_space-other_T2w_label-CSF_seg.json diff --git a/derivatives/labels/sub-geneva04/anat/sub-geneva04_space-other_T2w_csflabel-SC_seg.nii.gz b/derivatives/labels/sub-geneva04/anat/sub-geneva04_space-other_T2w_label-CSF_seg.nii.gz similarity index 100% rename from derivatives/labels/sub-geneva04/anat/sub-geneva04_space-other_T2w_csflabel-SC_seg.nii.gz rename to derivatives/labels/sub-geneva04/anat/sub-geneva04_space-other_T2w_label-CSF_seg.nii.gz diff --git a/derivatives/labels/sub-geneva04/anat/sub-geneva04_space-other_T2w_label-canal_seg.json b/derivatives/labels/sub-geneva04/anat/sub-geneva04_space-other_T2w_label-canal_seg.json new file mode 100644 index 0000000000..9b765ae333 --- /dev/null +++ b/derivatives/labels/sub-geneva04/anat/sub-geneva04_space-other_T2w_label-canal_seg.json @@ -0,0 +1,11 @@ +{ + "SpatialReference": { + "Orientation": "RPI", + "Resampling": "0.8x0.8x0.8" + }, + "GeneratedBy": [ + { + "Description": "Created from label-CSF_seg" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-geneva04/anat/sub-geneva04_space-other_T2w_label-canal_seg.nii.gz b/derivatives/labels/sub-geneva04/anat/sub-geneva04_space-other_T2w_label-canal_seg.nii.gz new file mode 100644 index 0000000000..583a2d2466 --- /dev/null +++ b/derivatives/labels/sub-geneva04/anat/sub-geneva04_space-other_T2w_label-canal_seg.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s140322--8b767c3e6fc4e0de5d2b60be6049134eeea4de748a7d48727ad2a4787681df1d.nii.gz diff --git a/derivatives/labels/sub-geneva05/anat/sub-geneva05_space-other_T1w_label-discs_dlabel.json b/derivatives/labels/sub-geneva05/anat/sub-geneva05_T1w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-geneva05/anat/sub-geneva05_space-other_T1w_label-discs_dlabel.json rename to derivatives/labels/sub-geneva05/anat/sub-geneva05_T1w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-geneva05/anat/sub-geneva05_space-other_T1w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-geneva05/anat/sub-geneva05_T1w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-geneva05/anat/sub-geneva05_space-other_T1w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-geneva05/anat/sub-geneva05_T1w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-geneva05/anat/sub-geneva05_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-geneva05/anat/sub-geneva05_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-geneva05/anat/sub-geneva05_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-geneva05/anat/sub-geneva05_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-geneva05/anat/sub-geneva05_T2star_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-geneva05/anat/sub-geneva05_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-geneva05/anat/sub-geneva05_T2star_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-geneva05/anat/sub-geneva05_space-other_T2w_label-discs_dlabel.json b/derivatives/labels/sub-geneva05/anat/sub-geneva05_T2w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-geneva05/anat/sub-geneva05_space-other_T2w_label-discs_dlabel.json rename to derivatives/labels/sub-geneva05/anat/sub-geneva05_T2w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-geneva05/anat/sub-geneva05_space-other_T2w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-geneva05/anat/sub-geneva05_T2w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-geneva05/anat/sub-geneva05_space-other_T2w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-geneva05/anat/sub-geneva05_T2w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-geneva05/anat/sub-geneva05_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-geneva05/anat/sub-geneva05_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-geneva05/anat/sub-geneva05_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-geneva05/anat/sub-geneva05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-geneva05/anat/sub-geneva05_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-geneva05/anat/sub-geneva05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-geneva05/anat/sub-geneva05_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-geneva05/anat/sub-geneva05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-geneva05/anat/sub-geneva05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-geneva05/anat/sub-geneva05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-geneva05/anat/sub-geneva05_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-geneva05/anat/sub-geneva05_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-geneva05/anat/sub-geneva05_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-geneva05/anat/sub-geneva05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-geneva05/anat/sub-geneva05_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-geneva05/anat/sub-geneva05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-geneva05/anat/sub-geneva05_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-geneva05/anat/sub-geneva05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-geneva05/anat/sub-geneva05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-geneva05/anat/sub-geneva05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-geneva05/anat/sub-geneva05_space-other_T2star_label-SC_seg.nii.gz b/derivatives/labels/sub-geneva05/anat/sub-geneva05_space-other_T2star_label-SC_seg.nii.gz index 08db5a9184..45e3dbd9e4 100644 --- a/derivatives/labels/sub-geneva05/anat/sub-geneva05_space-other_T2star_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-geneva05/anat/sub-geneva05_space-other_T2star_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s6849--43944c0eaaa13ac9de86e91387c471224b2ecabc08919bd4cb8bd1fc96fb5b30.nii.gz +/annex/objects/SHA256E-s28459--e859b1a03fcee2e5f44f3ceb37da200a6796262495115c4fba4395ceb2f709f2.nii.gz diff --git a/derivatives/labels/sub-geneva05/anat/sub-geneva05_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-geneva05/anat/sub-geneva05_space-other_T2star_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-geneva05/anat/sub-geneva05_space-other_T2star_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-geneva06/anat/sub-geneva06_space-other_T1w_label-discs_dlabel.json b/derivatives/labels/sub-geneva06/anat/sub-geneva06_T1w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-geneva06/anat/sub-geneva06_space-other_T1w_label-discs_dlabel.json rename to derivatives/labels/sub-geneva06/anat/sub-geneva06_T1w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-geneva06/anat/sub-geneva06_space-other_T1w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-geneva06/anat/sub-geneva06_T1w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-geneva06/anat/sub-geneva06_space-other_T1w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-geneva06/anat/sub-geneva06_T1w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-geneva06/anat/sub-geneva06_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-geneva06/anat/sub-geneva06_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-geneva06/anat/sub-geneva06_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-geneva06/anat/sub-geneva06_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-geneva06/anat/sub-geneva06_T2star_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-geneva06/anat/sub-geneva06_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-geneva06/anat/sub-geneva06_T2star_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-geneva06/anat/sub-geneva06_space-other_T2w_label-discs_dlabel.json b/derivatives/labels/sub-geneva06/anat/sub-geneva06_T2w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-geneva06/anat/sub-geneva06_space-other_T2w_label-discs_dlabel.json rename to derivatives/labels/sub-geneva06/anat/sub-geneva06_T2w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-geneva06/anat/sub-geneva06_space-other_T2w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-geneva06/anat/sub-geneva06_T2w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-geneva06/anat/sub-geneva06_space-other_T2w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-geneva06/anat/sub-geneva06_T2w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-geneva06/anat/sub-geneva06_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-geneva06/anat/sub-geneva06_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-geneva06/anat/sub-geneva06_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-geneva06/anat/sub-geneva06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-geneva06/anat/sub-geneva06_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-geneva06/anat/sub-geneva06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-geneva06/anat/sub-geneva06_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-geneva06/anat/sub-geneva06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-geneva06/anat/sub-geneva06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-geneva06/anat/sub-geneva06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-geneva06/anat/sub-geneva06_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-geneva06/anat/sub-geneva06_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-geneva06/anat/sub-geneva06_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-geneva06/anat/sub-geneva06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-geneva06/anat/sub-geneva06_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-geneva06/anat/sub-geneva06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-geneva06/anat/sub-geneva06_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-geneva06/anat/sub-geneva06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-geneva06/anat/sub-geneva06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-geneva06/anat/sub-geneva06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-geneva06/anat/sub-geneva06_space-other_T2star_label-SC_seg.nii.gz b/derivatives/labels/sub-geneva06/anat/sub-geneva06_space-other_T2star_label-SC_seg.nii.gz index 74c9425a3b..147a122f05 100644 --- a/derivatives/labels/sub-geneva06/anat/sub-geneva06_space-other_T2star_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-geneva06/anat/sub-geneva06_space-other_T2star_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s6870--fe3162694bf4631a90b4896dc48bc1abf0920d1b24684bafdf60c565b7cbca46.nii.gz +/annex/objects/SHA256E-s28491--9d6c8b2229e128d123c14f3e4935aa1f3bcb4a5993aecfa0cac34f8202ddacd1.nii.gz diff --git a/derivatives/labels/sub-geneva06/anat/sub-geneva06_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-geneva06/anat/sub-geneva06_space-other_T2star_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-geneva06/anat/sub-geneva06_space-other_T2star_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-hamburg01/anat/sub-hamburg01_space-other_T1w_label-discs_dlabel.json b/derivatives/labels/sub-hamburg01/anat/sub-hamburg01_T1w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-hamburg01/anat/sub-hamburg01_space-other_T1w_label-discs_dlabel.json rename to derivatives/labels/sub-hamburg01/anat/sub-hamburg01_T1w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-hamburg01/anat/sub-hamburg01_space-other_T1w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-hamburg01/anat/sub-hamburg01_T1w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-hamburg01/anat/sub-hamburg01_space-other_T1w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-hamburg01/anat/sub-hamburg01_T1w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-hamburg01/anat/sub-hamburg01_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-hamburg01/anat/sub-hamburg01_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-hamburg01/anat/sub-hamburg01_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-hamburg01/anat/sub-hamburg01_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-hamburg01/anat/sub-hamburg01_T2star_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-hamburg01/anat/sub-hamburg01_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-hamburg01/anat/sub-hamburg01_T2star_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-hamburg01/anat/sub-hamburg01_space-other_T2w_label-discs_dlabel.json b/derivatives/labels/sub-hamburg01/anat/sub-hamburg01_T2w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-hamburg01/anat/sub-hamburg01_space-other_T2w_label-discs_dlabel.json rename to derivatives/labels/sub-hamburg01/anat/sub-hamburg01_T2w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-hamburg01/anat/sub-hamburg01_space-other_T2w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-hamburg01/anat/sub-hamburg01_T2w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-hamburg01/anat/sub-hamburg01_space-other_T2w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-hamburg01/anat/sub-hamburg01_T2w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-hamburg01/anat/sub-hamburg01_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-hamburg01/anat/sub-hamburg01_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-hamburg01/anat/sub-hamburg01_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-hamburg01/anat/sub-hamburg01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-hamburg01/anat/sub-hamburg01_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-hamburg01/anat/sub-hamburg01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-hamburg01/anat/sub-hamburg01_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-hamburg01/anat/sub-hamburg01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-hamburg01/anat/sub-hamburg01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-hamburg01/anat/sub-hamburg01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-hamburg01/anat/sub-hamburg01_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-hamburg01/anat/sub-hamburg01_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-hamburg01/anat/sub-hamburg01_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-hamburg01/anat/sub-hamburg01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-hamburg01/anat/sub-hamburg01_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-hamburg01/anat/sub-hamburg01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-hamburg01/anat/sub-hamburg01_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-hamburg01/anat/sub-hamburg01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-hamburg01/anat/sub-hamburg01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-hamburg01/anat/sub-hamburg01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-hamburg01/anat/sub-hamburg01_space-other_T2star_label-SC_seg.nii.gz b/derivatives/labels/sub-hamburg01/anat/sub-hamburg01_space-other_T2star_label-SC_seg.nii.gz index f1eaba2e23..b06f582a6a 100644 --- a/derivatives/labels/sub-hamburg01/anat/sub-hamburg01_space-other_T2star_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-hamburg01/anat/sub-hamburg01_space-other_T2star_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s14842--8b3a16d45aaae926b14074427d6561e825d9b8f6225d405ac0c266de24b0a8c1.nii.gz +/annex/objects/SHA256E-s14863--3844c6939a7132a3394ed0a8301196a3d6d67de222dafeb79d294102cb217bc4.nii.gz diff --git a/derivatives/labels/sub-hamburg01/anat/sub-hamburg01_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-hamburg01/anat/sub-hamburg01_space-other_T2star_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-hamburg01/anat/sub-hamburg01_space-other_T2star_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-hamburg02/anat/sub-hamburg02_space-other_T1w_label-discs_dlabel.json b/derivatives/labels/sub-hamburg02/anat/sub-hamburg02_T1w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-hamburg02/anat/sub-hamburg02_space-other_T1w_label-discs_dlabel.json rename to derivatives/labels/sub-hamburg02/anat/sub-hamburg02_T1w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-hamburg02/anat/sub-hamburg02_space-other_T1w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-hamburg02/anat/sub-hamburg02_T1w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-hamburg02/anat/sub-hamburg02_space-other_T1w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-hamburg02/anat/sub-hamburg02_T1w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-hamburg02/anat/sub-hamburg02_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-hamburg02/anat/sub-hamburg02_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-hamburg02/anat/sub-hamburg02_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-hamburg02/anat/sub-hamburg02_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-hamburg02/anat/sub-hamburg02_T2star_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-hamburg02/anat/sub-hamburg02_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-hamburg02/anat/sub-hamburg02_T2star_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-hamburg02/anat/sub-hamburg02_space-other_T2w_label-discs_dlabel.json b/derivatives/labels/sub-hamburg02/anat/sub-hamburg02_T2w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-hamburg02/anat/sub-hamburg02_space-other_T2w_label-discs_dlabel.json rename to derivatives/labels/sub-hamburg02/anat/sub-hamburg02_T2w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-hamburg02/anat/sub-hamburg02_space-other_T2w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-hamburg02/anat/sub-hamburg02_T2w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-hamburg02/anat/sub-hamburg02_space-other_T2w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-hamburg02/anat/sub-hamburg02_T2w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-hamburg02/anat/sub-hamburg02_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-hamburg02/anat/sub-hamburg02_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-hamburg02/anat/sub-hamburg02_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-hamburg02/anat/sub-hamburg02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-hamburg02/anat/sub-hamburg02_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-hamburg02/anat/sub-hamburg02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-hamburg02/anat/sub-hamburg02_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-hamburg02/anat/sub-hamburg02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-hamburg02/anat/sub-hamburg02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-hamburg02/anat/sub-hamburg02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-hamburg02/anat/sub-hamburg02_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-hamburg02/anat/sub-hamburg02_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-hamburg02/anat/sub-hamburg02_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-hamburg02/anat/sub-hamburg02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-hamburg02/anat/sub-hamburg02_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-hamburg02/anat/sub-hamburg02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-hamburg02/anat/sub-hamburg02_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-hamburg02/anat/sub-hamburg02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-hamburg02/anat/sub-hamburg02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-hamburg02/anat/sub-hamburg02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-hamburg02/anat/sub-hamburg02_space-other_T2star_label-SC_seg.nii.gz b/derivatives/labels/sub-hamburg02/anat/sub-hamburg02_space-other_T2star_label-SC_seg.nii.gz index 40fd27625b..7250fa27e8 100644 --- a/derivatives/labels/sub-hamburg02/anat/sub-hamburg02_space-other_T2star_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-hamburg02/anat/sub-hamburg02_space-other_T2star_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s14819--9f5b5761509c388d84e7aaa2db227e4598fea24543e7b83798e2661c7552f992.nii.gz +/annex/objects/SHA256E-s14840--b87a9ad13758d1fb35886e1d38d01e7d77beaafc72f9b740006da6cddb1dc75f.nii.gz diff --git a/derivatives/labels/sub-hamburg02/anat/sub-hamburg02_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-hamburg02/anat/sub-hamburg02_space-other_T2star_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-hamburg02/anat/sub-hamburg02_space-other_T2star_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-hamburg03/anat/sub-hamburg03_space-other_T1w_label-discs_dlabel.json b/derivatives/labels/sub-hamburg03/anat/sub-hamburg03_T1w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-hamburg03/anat/sub-hamburg03_space-other_T1w_label-discs_dlabel.json rename to derivatives/labels/sub-hamburg03/anat/sub-hamburg03_T1w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-hamburg03/anat/sub-hamburg03_space-other_T1w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-hamburg03/anat/sub-hamburg03_T1w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-hamburg03/anat/sub-hamburg03_space-other_T1w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-hamburg03/anat/sub-hamburg03_T1w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-hamburg03/anat/sub-hamburg03_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-hamburg03/anat/sub-hamburg03_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-hamburg03/anat/sub-hamburg03_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-hamburg03/anat/sub-hamburg03_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-hamburg03/anat/sub-hamburg03_T2star_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-hamburg03/anat/sub-hamburg03_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-hamburg03/anat/sub-hamburg03_T2star_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-hamburg03/anat/sub-hamburg03_space-other_T2w_label-discs_dlabel.json b/derivatives/labels/sub-hamburg03/anat/sub-hamburg03_T2w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-hamburg03/anat/sub-hamburg03_space-other_T2w_label-discs_dlabel.json rename to derivatives/labels/sub-hamburg03/anat/sub-hamburg03_T2w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-hamburg03/anat/sub-hamburg03_space-other_T2w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-hamburg03/anat/sub-hamburg03_T2w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-hamburg03/anat/sub-hamburg03_space-other_T2w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-hamburg03/anat/sub-hamburg03_T2w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-hamburg03/anat/sub-hamburg03_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-hamburg03/anat/sub-hamburg03_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-hamburg03/anat/sub-hamburg03_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-hamburg03/anat/sub-hamburg03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-hamburg03/anat/sub-hamburg03_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-hamburg03/anat/sub-hamburg03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-hamburg03/anat/sub-hamburg03_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-hamburg03/anat/sub-hamburg03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-hamburg03/anat/sub-hamburg03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-hamburg03/anat/sub-hamburg03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-hamburg03/anat/sub-hamburg03_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-hamburg03/anat/sub-hamburg03_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-hamburg03/anat/sub-hamburg03_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-hamburg03/anat/sub-hamburg03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-hamburg03/anat/sub-hamburg03_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-hamburg03/anat/sub-hamburg03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-hamburg03/anat/sub-hamburg03_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-hamburg03/anat/sub-hamburg03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-hamburg03/anat/sub-hamburg03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-hamburg03/anat/sub-hamburg03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-hamburg03/anat/sub-hamburg03_space-other_T2star_label-SC_seg.nii.gz b/derivatives/labels/sub-hamburg03/anat/sub-hamburg03_space-other_T2star_label-SC_seg.nii.gz index 4dd27531ea..8bf0d3d6f3 100644 --- a/derivatives/labels/sub-hamburg03/anat/sub-hamburg03_space-other_T2star_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-hamburg03/anat/sub-hamburg03_space-other_T2star_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s14888--a270f3e935fe44b00aa8f402fc3caac072f8d5b965f25a0c9387505607406bd1.nii.gz +/annex/objects/SHA256E-s14909--ae0ddfb50a7eaf651f337a2a5b0528cea0848c94bdeb1f5c595e83e22003bb7d.nii.gz diff --git a/derivatives/labels/sub-hamburg03/anat/sub-hamburg03_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-hamburg03/anat/sub-hamburg03_space-other_T2star_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-hamburg03/anat/sub-hamburg03_space-other_T2star_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-hamburg04/anat/sub-hamburg04_space-other_T1w_label-discs_dlabel.json b/derivatives/labels/sub-hamburg04/anat/sub-hamburg04_T1w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-hamburg04/anat/sub-hamburg04_space-other_T1w_label-discs_dlabel.json rename to derivatives/labels/sub-hamburg04/anat/sub-hamburg04_T1w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-hamburg04/anat/sub-hamburg04_space-other_T1w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-hamburg04/anat/sub-hamburg04_T1w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-hamburg04/anat/sub-hamburg04_space-other_T1w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-hamburg04/anat/sub-hamburg04_T1w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-hamburg04/anat/sub-hamburg04_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-hamburg04/anat/sub-hamburg04_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-hamburg04/anat/sub-hamburg04_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-hamburg04/anat/sub-hamburg04_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-hamburg04/anat/sub-hamburg04_T2star_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-hamburg04/anat/sub-hamburg04_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-hamburg04/anat/sub-hamburg04_T2star_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-hamburg04/anat/sub-hamburg04_space-other_T2w_label-discs_dlabel.json b/derivatives/labels/sub-hamburg04/anat/sub-hamburg04_T2w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-hamburg04/anat/sub-hamburg04_space-other_T2w_label-discs_dlabel.json rename to derivatives/labels/sub-hamburg04/anat/sub-hamburg04_T2w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-hamburg04/anat/sub-hamburg04_space-other_T2w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-hamburg04/anat/sub-hamburg04_T2w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-hamburg04/anat/sub-hamburg04_space-other_T2w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-hamburg04/anat/sub-hamburg04_T2w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-hamburg04/anat/sub-hamburg04_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-hamburg04/anat/sub-hamburg04_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-hamburg04/anat/sub-hamburg04_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-hamburg04/anat/sub-hamburg04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-hamburg04/anat/sub-hamburg04_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-hamburg04/anat/sub-hamburg04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-hamburg04/anat/sub-hamburg04_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-hamburg04/anat/sub-hamburg04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-hamburg04/anat/sub-hamburg04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-hamburg04/anat/sub-hamburg04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-hamburg04/anat/sub-hamburg04_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-hamburg04/anat/sub-hamburg04_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-hamburg04/anat/sub-hamburg04_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-hamburg04/anat/sub-hamburg04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-hamburg04/anat/sub-hamburg04_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-hamburg04/anat/sub-hamburg04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-hamburg04/anat/sub-hamburg04_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-hamburg04/anat/sub-hamburg04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-hamburg04/anat/sub-hamburg04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-hamburg04/anat/sub-hamburg04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-hamburg04/anat/sub-hamburg04_space-other_T2star_label-SC_seg.nii.gz b/derivatives/labels/sub-hamburg04/anat/sub-hamburg04_space-other_T2star_label-SC_seg.nii.gz index 30ea1a3e22..f5c7f68782 100644 --- a/derivatives/labels/sub-hamburg04/anat/sub-hamburg04_space-other_T2star_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-hamburg04/anat/sub-hamburg04_space-other_T2star_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s14896--0f27bb792a3a7d7ee6364619e4d60050354f7c6cd08e4f6423e5349e141e4477.nii.gz +/annex/objects/SHA256E-s14917--c475ced7a71684a15c2426730572211b17381fc92ff22cf27dfb1ca34856a56f.nii.gz diff --git a/derivatives/labels/sub-hamburg04/anat/sub-hamburg04_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-hamburg04/anat/sub-hamburg04_space-other_T2star_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-hamburg04/anat/sub-hamburg04_space-other_T2star_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-hamburg05/anat/sub-hamburg05_space-other_T1w_label-discs_dlabel.json b/derivatives/labels/sub-hamburg05/anat/sub-hamburg05_T1w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-hamburg05/anat/sub-hamburg05_space-other_T1w_label-discs_dlabel.json rename to derivatives/labels/sub-hamburg05/anat/sub-hamburg05_T1w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-hamburg05/anat/sub-hamburg05_space-other_T1w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-hamburg05/anat/sub-hamburg05_T1w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-hamburg05/anat/sub-hamburg05_space-other_T1w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-hamburg05/anat/sub-hamburg05_T1w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-hamburg05/anat/sub-hamburg05_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-hamburg05/anat/sub-hamburg05_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-hamburg05/anat/sub-hamburg05_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-hamburg05/anat/sub-hamburg05_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-hamburg05/anat/sub-hamburg05_T2star_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-hamburg05/anat/sub-hamburg05_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-hamburg05/anat/sub-hamburg05_T2star_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-hamburg05/anat/sub-hamburg05_space-other_T2w_label-discs_dlabel.json b/derivatives/labels/sub-hamburg05/anat/sub-hamburg05_T2w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-hamburg05/anat/sub-hamburg05_space-other_T2w_label-discs_dlabel.json rename to derivatives/labels/sub-hamburg05/anat/sub-hamburg05_T2w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-hamburg05/anat/sub-hamburg05_space-other_T2w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-hamburg05/anat/sub-hamburg05_T2w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-hamburg05/anat/sub-hamburg05_space-other_T2w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-hamburg05/anat/sub-hamburg05_T2w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-hamburg05/anat/sub-hamburg05_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-hamburg05/anat/sub-hamburg05_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-hamburg05/anat/sub-hamburg05_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-hamburg05/anat/sub-hamburg05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-hamburg05/anat/sub-hamburg05_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-hamburg05/anat/sub-hamburg05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-hamburg05/anat/sub-hamburg05_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-hamburg05/anat/sub-hamburg05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-hamburg05/anat/sub-hamburg05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-hamburg05/anat/sub-hamburg05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-hamburg05/anat/sub-hamburg05_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-hamburg05/anat/sub-hamburg05_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-hamburg05/anat/sub-hamburg05_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-hamburg05/anat/sub-hamburg05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-hamburg05/anat/sub-hamburg05_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-hamburg05/anat/sub-hamburg05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-hamburg05/anat/sub-hamburg05_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-hamburg05/anat/sub-hamburg05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-hamburg05/anat/sub-hamburg05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-hamburg05/anat/sub-hamburg05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-hamburg05/anat/sub-hamburg05_space-other_T2star_label-SC_seg.nii.gz b/derivatives/labels/sub-hamburg05/anat/sub-hamburg05_space-other_T2star_label-SC_seg.nii.gz index 491e3eaef8..0ffe01f8de 100644 --- a/derivatives/labels/sub-hamburg05/anat/sub-hamburg05_space-other_T2star_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-hamburg05/anat/sub-hamburg05_space-other_T2star_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s14926--0723873619bf3598eaa81ad30dfd20859ad840ea9713ae287f32fbca794771c1.nii.gz +/annex/objects/SHA256E-s14947--3fabbdc9e5209c0af7ca20b200b92836089e2ac83de530a957e29839c55518b4.nii.gz diff --git a/derivatives/labels/sub-hamburg05/anat/sub-hamburg05_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-hamburg05/anat/sub-hamburg05_space-other_T2star_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-hamburg05/anat/sub-hamburg05_space-other_T2star_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-hamburg06/anat/sub-hamburg06_space-other_T1w_label-discs_dlabel.json b/derivatives/labels/sub-hamburg06/anat/sub-hamburg06_T1w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-hamburg06/anat/sub-hamburg06_space-other_T1w_label-discs_dlabel.json rename to derivatives/labels/sub-hamburg06/anat/sub-hamburg06_T1w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-hamburg06/anat/sub-hamburg06_space-other_T1w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-hamburg06/anat/sub-hamburg06_T1w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-hamburg06/anat/sub-hamburg06_space-other_T1w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-hamburg06/anat/sub-hamburg06_T1w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-hamburg06/anat/sub-hamburg06_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-hamburg06/anat/sub-hamburg06_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-hamburg06/anat/sub-hamburg06_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-hamburg06/anat/sub-hamburg06_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-hamburg06/anat/sub-hamburg06_T2star_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-hamburg06/anat/sub-hamburg06_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-hamburg06/anat/sub-hamburg06_T2star_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-hamburg06/anat/sub-hamburg06_space-other_T2w_label-discs_dlabel.json b/derivatives/labels/sub-hamburg06/anat/sub-hamburg06_T2w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-hamburg06/anat/sub-hamburg06_space-other_T2w_label-discs_dlabel.json rename to derivatives/labels/sub-hamburg06/anat/sub-hamburg06_T2w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-hamburg06/anat/sub-hamburg06_space-other_T2w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-hamburg06/anat/sub-hamburg06_T2w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-hamburg06/anat/sub-hamburg06_space-other_T2w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-hamburg06/anat/sub-hamburg06_T2w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-hamburg06/anat/sub-hamburg06_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-hamburg06/anat/sub-hamburg06_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-hamburg06/anat/sub-hamburg06_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-hamburg06/anat/sub-hamburg06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-hamburg06/anat/sub-hamburg06_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-hamburg06/anat/sub-hamburg06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-hamburg06/anat/sub-hamburg06_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-hamburg06/anat/sub-hamburg06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-hamburg06/anat/sub-hamburg06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-hamburg06/anat/sub-hamburg06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-hamburg06/anat/sub-hamburg06_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-hamburg06/anat/sub-hamburg06_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-hamburg06/anat/sub-hamburg06_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-hamburg06/anat/sub-hamburg06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-hamburg06/anat/sub-hamburg06_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-hamburg06/anat/sub-hamburg06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-hamburg06/anat/sub-hamburg06_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-hamburg06/anat/sub-hamburg06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-hamburg06/anat/sub-hamburg06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-hamburg06/anat/sub-hamburg06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-hamburg06/anat/sub-hamburg06_space-other_T2star_label-SC_seg.nii.gz b/derivatives/labels/sub-hamburg06/anat/sub-hamburg06_space-other_T2star_label-SC_seg.nii.gz index 90a921d5f1..eb08452f1a 100644 --- a/derivatives/labels/sub-hamburg06/anat/sub-hamburg06_space-other_T2star_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-hamburg06/anat/sub-hamburg06_space-other_T2star_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s14810--243f839e71e873957b7651edbe427f5707880eca688f36e6b1075c64fff6aa49.nii.gz +/annex/objects/SHA256E-s14831--6b80058661ef90ac53e7736f0001ff216ecdc176ab05165fd2b1129d60530aad.nii.gz diff --git a/derivatives/labels/sub-hamburg06/anat/sub-hamburg06_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-hamburg06/anat/sub-hamburg06_space-other_T2star_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-hamburg06/anat/sub-hamburg06_space-other_T2star_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-juntendo750w01/anat/sub-juntendo750w01_space-other_T1w_label-discs_dlabel.json b/derivatives/labels/sub-juntendo750w01/anat/sub-juntendo750w01_T1w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-juntendo750w01/anat/sub-juntendo750w01_space-other_T1w_label-discs_dlabel.json rename to derivatives/labels/sub-juntendo750w01/anat/sub-juntendo750w01_T1w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-juntendo750w01/anat/sub-juntendo750w01_space-other_T1w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-juntendo750w01/anat/sub-juntendo750w01_T1w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-juntendo750w01/anat/sub-juntendo750w01_space-other_T1w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-juntendo750w01/anat/sub-juntendo750w01_T1w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-juntendo750w01/anat/sub-juntendo750w01_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-juntendo750w01/anat/sub-juntendo750w01_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-juntendo750w01/anat/sub-juntendo750w01_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-juntendo750w01/anat/sub-juntendo750w01_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-juntendo750w01/anat/sub-juntendo750w01_T2star_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-juntendo750w01/anat/sub-juntendo750w01_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-juntendo750w01/anat/sub-juntendo750w01_T2star_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-juntendo750w01/anat/sub-juntendo750w01_space-other_T2w_label-discs_dlabel.json b/derivatives/labels/sub-juntendo750w01/anat/sub-juntendo750w01_T2w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-juntendo750w01/anat/sub-juntendo750w01_space-other_T2w_label-discs_dlabel.json rename to derivatives/labels/sub-juntendo750w01/anat/sub-juntendo750w01_T2w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-juntendo750w01/anat/sub-juntendo750w01_space-other_T2w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-juntendo750w01/anat/sub-juntendo750w01_T2w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-juntendo750w01/anat/sub-juntendo750w01_space-other_T2w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-juntendo750w01/anat/sub-juntendo750w01_T2w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-juntendo750w01/anat/sub-juntendo750w01_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-juntendo750w01/anat/sub-juntendo750w01_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-juntendo750w01/anat/sub-juntendo750w01_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-juntendo750w01/anat/sub-juntendo750w01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-juntendo750w01/anat/sub-juntendo750w01_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-juntendo750w01/anat/sub-juntendo750w01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-juntendo750w01/anat/sub-juntendo750w01_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-juntendo750w01/anat/sub-juntendo750w01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-juntendo750w01/anat/sub-juntendo750w01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-juntendo750w01/anat/sub-juntendo750w01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-juntendo750w01/anat/sub-juntendo750w01_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-juntendo750w01/anat/sub-juntendo750w01_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-juntendo750w01/anat/sub-juntendo750w01_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-juntendo750w01/anat/sub-juntendo750w01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-juntendo750w01/anat/sub-juntendo750w01_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-juntendo750w01/anat/sub-juntendo750w01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-juntendo750w01/anat/sub-juntendo750w01_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-juntendo750w01/anat/sub-juntendo750w01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-juntendo750w01/anat/sub-juntendo750w01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-juntendo750w01/anat/sub-juntendo750w01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-juntendo750w01/anat/sub-juntendo750w01_space-other_T2star_label-SC_seg.nii.gz b/derivatives/labels/sub-juntendo750w01/anat/sub-juntendo750w01_space-other_T2star_label-SC_seg.nii.gz index 35126d9ea6..30a304d90a 100644 --- a/derivatives/labels/sub-juntendo750w01/anat/sub-juntendo750w01_space-other_T2star_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-juntendo750w01/anat/sub-juntendo750w01_space-other_T2star_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s14901--4fd2791d49005392490a3ff269370c57fcb5279eca4dff7915bfc100e1cade93.nii.gz +/annex/objects/SHA256E-s14922--6667e64aed8c95f37f2b2d4e49d34c7fb9f33ad25b0f7fa9d7f7454ad12cab4c.nii.gz diff --git a/derivatives/labels/sub-juntendo750w01/anat/sub-juntendo750w01_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-juntendo750w01/anat/sub-juntendo750w01_space-other_T2star_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-juntendo750w01/anat/sub-juntendo750w01_space-other_T2star_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-juntendo750w02/anat/sub-juntendo750w02_space-other_T1w_label-discs_dlabel.json b/derivatives/labels/sub-juntendo750w02/anat/sub-juntendo750w02_T1w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-juntendo750w02/anat/sub-juntendo750w02_space-other_T1w_label-discs_dlabel.json rename to derivatives/labels/sub-juntendo750w02/anat/sub-juntendo750w02_T1w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-juntendo750w02/anat/sub-juntendo750w02_space-other_T1w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-juntendo750w02/anat/sub-juntendo750w02_T1w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-juntendo750w02/anat/sub-juntendo750w02_space-other_T1w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-juntendo750w02/anat/sub-juntendo750w02_T1w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-juntendo750w02/anat/sub-juntendo750w02_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-juntendo750w02/anat/sub-juntendo750w02_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-juntendo750w02/anat/sub-juntendo750w02_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-juntendo750w02/anat/sub-juntendo750w02_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-juntendo750w02/anat/sub-juntendo750w02_T2star_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-juntendo750w02/anat/sub-juntendo750w02_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-juntendo750w02/anat/sub-juntendo750w02_T2star_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-juntendo750w02/anat/sub-juntendo750w02_space-other_T2w_label-discs_dlabel.json b/derivatives/labels/sub-juntendo750w02/anat/sub-juntendo750w02_T2w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-juntendo750w02/anat/sub-juntendo750w02_space-other_T2w_label-discs_dlabel.json rename to derivatives/labels/sub-juntendo750w02/anat/sub-juntendo750w02_T2w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-juntendo750w02/anat/sub-juntendo750w02_space-other_T2w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-juntendo750w02/anat/sub-juntendo750w02_T2w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-juntendo750w02/anat/sub-juntendo750w02_space-other_T2w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-juntendo750w02/anat/sub-juntendo750w02_T2w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-juntendo750w02/anat/sub-juntendo750w02_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-juntendo750w02/anat/sub-juntendo750w02_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-juntendo750w02/anat/sub-juntendo750w02_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-juntendo750w02/anat/sub-juntendo750w02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-juntendo750w02/anat/sub-juntendo750w02_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-juntendo750w02/anat/sub-juntendo750w02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-juntendo750w02/anat/sub-juntendo750w02_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-juntendo750w02/anat/sub-juntendo750w02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-juntendo750w02/anat/sub-juntendo750w02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-juntendo750w02/anat/sub-juntendo750w02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-juntendo750w02/anat/sub-juntendo750w02_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-juntendo750w02/anat/sub-juntendo750w02_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-juntendo750w02/anat/sub-juntendo750w02_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-juntendo750w02/anat/sub-juntendo750w02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-juntendo750w02/anat/sub-juntendo750w02_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-juntendo750w02/anat/sub-juntendo750w02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-juntendo750w02/anat/sub-juntendo750w02_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-juntendo750w02/anat/sub-juntendo750w02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-juntendo750w02/anat/sub-juntendo750w02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-juntendo750w02/anat/sub-juntendo750w02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-juntendo750w02/anat/sub-juntendo750w02_space-other_T2star_label-SC_seg.nii.gz b/derivatives/labels/sub-juntendo750w02/anat/sub-juntendo750w02_space-other_T2star_label-SC_seg.nii.gz index 600444edc1..3da5c2a7d7 100644 --- a/derivatives/labels/sub-juntendo750w02/anat/sub-juntendo750w02_space-other_T2star_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-juntendo750w02/anat/sub-juntendo750w02_space-other_T2star_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s14824--4a5d24f04e655fff2a8bd7b50daee445af2dcd3c3971c93efeca4200a15e8664.nii.gz +/annex/objects/SHA256E-s14845--897070bf393ca06178b7d5e59140923f33e125ecdcffb291c2802ccb9dee2cdc.nii.gz diff --git a/derivatives/labels/sub-juntendo750w02/anat/sub-juntendo750w02_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-juntendo750w02/anat/sub-juntendo750w02_space-other_T2star_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-juntendo750w02/anat/sub-juntendo750w02_space-other_T2star_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-juntendo750w03/anat/sub-juntendo750w03_space-other_T1w_label-discs_dlabel.json b/derivatives/labels/sub-juntendo750w03/anat/sub-juntendo750w03_T1w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-juntendo750w03/anat/sub-juntendo750w03_space-other_T1w_label-discs_dlabel.json rename to derivatives/labels/sub-juntendo750w03/anat/sub-juntendo750w03_T1w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-juntendo750w03/anat/sub-juntendo750w03_space-other_T1w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-juntendo750w03/anat/sub-juntendo750w03_T1w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-juntendo750w03/anat/sub-juntendo750w03_space-other_T1w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-juntendo750w03/anat/sub-juntendo750w03_T1w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-juntendo750w03/anat/sub-juntendo750w03_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-juntendo750w03/anat/sub-juntendo750w03_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-juntendo750w03/anat/sub-juntendo750w03_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-juntendo750w03/anat/sub-juntendo750w03_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-juntendo750w03/anat/sub-juntendo750w03_T2star_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-juntendo750w03/anat/sub-juntendo750w03_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-juntendo750w03/anat/sub-juntendo750w03_T2star_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-juntendo750w03/anat/sub-juntendo750w03_space-other_T2w_label-discs_dlabel.json b/derivatives/labels/sub-juntendo750w03/anat/sub-juntendo750w03_T2w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-juntendo750w03/anat/sub-juntendo750w03_space-other_T2w_label-discs_dlabel.json rename to derivatives/labels/sub-juntendo750w03/anat/sub-juntendo750w03_T2w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-juntendo750w03/anat/sub-juntendo750w03_space-other_T2w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-juntendo750w03/anat/sub-juntendo750w03_T2w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-juntendo750w03/anat/sub-juntendo750w03_space-other_T2w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-juntendo750w03/anat/sub-juntendo750w03_T2w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-juntendo750w03/anat/sub-juntendo750w03_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-juntendo750w03/anat/sub-juntendo750w03_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-juntendo750w03/anat/sub-juntendo750w03_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-juntendo750w03/anat/sub-juntendo750w03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-juntendo750w03/anat/sub-juntendo750w03_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-juntendo750w03/anat/sub-juntendo750w03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-juntendo750w03/anat/sub-juntendo750w03_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-juntendo750w03/anat/sub-juntendo750w03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-juntendo750w03/anat/sub-juntendo750w03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-juntendo750w03/anat/sub-juntendo750w03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-juntendo750w03/anat/sub-juntendo750w03_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-juntendo750w03/anat/sub-juntendo750w03_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-juntendo750w03/anat/sub-juntendo750w03_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-juntendo750w03/anat/sub-juntendo750w03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-juntendo750w03/anat/sub-juntendo750w03_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-juntendo750w03/anat/sub-juntendo750w03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-juntendo750w03/anat/sub-juntendo750w03_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-juntendo750w03/anat/sub-juntendo750w03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-juntendo750w03/anat/sub-juntendo750w03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-juntendo750w03/anat/sub-juntendo750w03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-juntendo750w03/anat/sub-juntendo750w03_space-other_T2star_label-SC_seg.nii.gz b/derivatives/labels/sub-juntendo750w03/anat/sub-juntendo750w03_space-other_T2star_label-SC_seg.nii.gz index 81c393cbcc..1a8e131515 100644 --- a/derivatives/labels/sub-juntendo750w03/anat/sub-juntendo750w03_space-other_T2star_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-juntendo750w03/anat/sub-juntendo750w03_space-other_T2star_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s14939--dd61378b88ba98607e47aa012ba3be9667b4d192925bf7878e6d12a4c7786fd3.nii.gz +/annex/objects/SHA256E-s14960--a6ecf0392cf3d88e118ecafcc895d2a2b0dd7bac4ed07d2de84be03ef4cf1597.nii.gz diff --git a/derivatives/labels/sub-juntendo750w03/anat/sub-juntendo750w03_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-juntendo750w03/anat/sub-juntendo750w03_space-other_T2star_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-juntendo750w03/anat/sub-juntendo750w03_space-other_T2star_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-juntendo750w04/anat/sub-juntendo750w04_space-other_T1w_label-discs_dlabel.json b/derivatives/labels/sub-juntendo750w04/anat/sub-juntendo750w04_T1w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-juntendo750w04/anat/sub-juntendo750w04_space-other_T1w_label-discs_dlabel.json rename to derivatives/labels/sub-juntendo750w04/anat/sub-juntendo750w04_T1w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-juntendo750w04/anat/sub-juntendo750w04_space-other_T1w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-juntendo750w04/anat/sub-juntendo750w04_T1w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-juntendo750w04/anat/sub-juntendo750w04_space-other_T1w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-juntendo750w04/anat/sub-juntendo750w04_T1w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-juntendo750w04/anat/sub-juntendo750w04_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-juntendo750w04/anat/sub-juntendo750w04_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-juntendo750w04/anat/sub-juntendo750w04_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-juntendo750w04/anat/sub-juntendo750w04_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-juntendo750w04/anat/sub-juntendo750w04_T2star_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-juntendo750w04/anat/sub-juntendo750w04_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-juntendo750w04/anat/sub-juntendo750w04_T2star_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-juntendo750w04/anat/sub-juntendo750w04_space-other_T2w_label-discs_dlabel.json b/derivatives/labels/sub-juntendo750w04/anat/sub-juntendo750w04_T2w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-juntendo750w04/anat/sub-juntendo750w04_space-other_T2w_label-discs_dlabel.json rename to derivatives/labels/sub-juntendo750w04/anat/sub-juntendo750w04_T2w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-juntendo750w04/anat/sub-juntendo750w04_space-other_T2w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-juntendo750w04/anat/sub-juntendo750w04_T2w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-juntendo750w04/anat/sub-juntendo750w04_space-other_T2w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-juntendo750w04/anat/sub-juntendo750w04_T2w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-juntendo750w04/anat/sub-juntendo750w04_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-juntendo750w04/anat/sub-juntendo750w04_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-juntendo750w04/anat/sub-juntendo750w04_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-juntendo750w04/anat/sub-juntendo750w04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-juntendo750w04/anat/sub-juntendo750w04_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-juntendo750w04/anat/sub-juntendo750w04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-juntendo750w04/anat/sub-juntendo750w04_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-juntendo750w04/anat/sub-juntendo750w04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-juntendo750w04/anat/sub-juntendo750w04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-juntendo750w04/anat/sub-juntendo750w04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-juntendo750w04/anat/sub-juntendo750w04_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-juntendo750w04/anat/sub-juntendo750w04_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-juntendo750w04/anat/sub-juntendo750w04_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-juntendo750w04/anat/sub-juntendo750w04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-juntendo750w04/anat/sub-juntendo750w04_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-juntendo750w04/anat/sub-juntendo750w04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-juntendo750w04/anat/sub-juntendo750w04_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-juntendo750w04/anat/sub-juntendo750w04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-juntendo750w04/anat/sub-juntendo750w04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-juntendo750w04/anat/sub-juntendo750w04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-juntendo750w04/anat/sub-juntendo750w04_space-other_T2star_label-SC_seg.nii.gz b/derivatives/labels/sub-juntendo750w04/anat/sub-juntendo750w04_space-other_T2star_label-SC_seg.nii.gz index ede7910b1d..f4037dcf84 100644 --- a/derivatives/labels/sub-juntendo750w04/anat/sub-juntendo750w04_space-other_T2star_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-juntendo750w04/anat/sub-juntendo750w04_space-other_T2star_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s14896--a057bf76bff96c68adac595e2a93678640c93b7448adc39c20dd76fdffbf48b0.nii.gz +/annex/objects/SHA256E-s14917--70127d90319baf85bcb3dd959c1d907ac5bb5661bb084b536e1dae2882df7ed4.nii.gz diff --git a/derivatives/labels/sub-juntendo750w04/anat/sub-juntendo750w04_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-juntendo750w04/anat/sub-juntendo750w04_space-other_T2star_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-juntendo750w04/anat/sub-juntendo750w04_space-other_T2star_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-juntendo750w05/anat/sub-juntendo750w05_space-other_T1w_label-discs_dlabel.json b/derivatives/labels/sub-juntendo750w05/anat/sub-juntendo750w05_T1w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-juntendo750w05/anat/sub-juntendo750w05_space-other_T1w_label-discs_dlabel.json rename to derivatives/labels/sub-juntendo750w05/anat/sub-juntendo750w05_T1w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-juntendo750w05/anat/sub-juntendo750w05_space-other_T1w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-juntendo750w05/anat/sub-juntendo750w05_T1w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-juntendo750w05/anat/sub-juntendo750w05_space-other_T1w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-juntendo750w05/anat/sub-juntendo750w05_T1w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-juntendo750w05/anat/sub-juntendo750w05_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-juntendo750w05/anat/sub-juntendo750w05_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-juntendo750w05/anat/sub-juntendo750w05_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-juntendo750w05/anat/sub-juntendo750w05_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-juntendo750w05/anat/sub-juntendo750w05_T2star_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-juntendo750w05/anat/sub-juntendo750w05_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-juntendo750w05/anat/sub-juntendo750w05_T2star_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-juntendo750w05/anat/sub-juntendo750w05_space-other_T2w_label-discs_dlabel.json b/derivatives/labels/sub-juntendo750w05/anat/sub-juntendo750w05_T2w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-juntendo750w05/anat/sub-juntendo750w05_space-other_T2w_label-discs_dlabel.json rename to derivatives/labels/sub-juntendo750w05/anat/sub-juntendo750w05_T2w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-juntendo750w05/anat/sub-juntendo750w05_space-other_T2w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-juntendo750w05/anat/sub-juntendo750w05_T2w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-juntendo750w05/anat/sub-juntendo750w05_space-other_T2w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-juntendo750w05/anat/sub-juntendo750w05_T2w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-juntendo750w05/anat/sub-juntendo750w05_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-juntendo750w05/anat/sub-juntendo750w05_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-juntendo750w05/anat/sub-juntendo750w05_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-juntendo750w05/anat/sub-juntendo750w05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-juntendo750w05/anat/sub-juntendo750w05_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-juntendo750w05/anat/sub-juntendo750w05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-juntendo750w05/anat/sub-juntendo750w05_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-juntendo750w05/anat/sub-juntendo750w05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-juntendo750w05/anat/sub-juntendo750w05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-juntendo750w05/anat/sub-juntendo750w05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-juntendo750w05/anat/sub-juntendo750w05_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-juntendo750w05/anat/sub-juntendo750w05_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-juntendo750w05/anat/sub-juntendo750w05_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-juntendo750w05/anat/sub-juntendo750w05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-juntendo750w05/anat/sub-juntendo750w05_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-juntendo750w05/anat/sub-juntendo750w05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-juntendo750w05/anat/sub-juntendo750w05_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-juntendo750w05/anat/sub-juntendo750w05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-juntendo750w05/anat/sub-juntendo750w05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-juntendo750w05/anat/sub-juntendo750w05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-juntendo750w05/anat/sub-juntendo750w05_space-other_T2star_label-SC_seg.nii.gz b/derivatives/labels/sub-juntendo750w05/anat/sub-juntendo750w05_space-other_T2star_label-SC_seg.nii.gz index 090a4128bf..de8048c24a 100644 --- a/derivatives/labels/sub-juntendo750w05/anat/sub-juntendo750w05_space-other_T2star_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-juntendo750w05/anat/sub-juntendo750w05_space-other_T2star_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s14687--ea541db1f2784580da7a104201d69eba42486fe89a3c686c968f63c06f427c43.nii.gz +/annex/objects/SHA256E-s14708--9558814836cacd29a73945cba23dfb29379ed33c3194d94b6f113a9df2537743.nii.gz diff --git a/derivatives/labels/sub-juntendo750w05/anat/sub-juntendo750w05_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-juntendo750w05/anat/sub-juntendo750w05_space-other_T2star_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-juntendo750w05/anat/sub-juntendo750w05_space-other_T2star_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-juntendo750w06/anat/sub-juntendo750w06_space-other_T1w_label-discs_dlabel.json b/derivatives/labels/sub-juntendo750w06/anat/sub-juntendo750w06_T1w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-juntendo750w06/anat/sub-juntendo750w06_space-other_T1w_label-discs_dlabel.json rename to derivatives/labels/sub-juntendo750w06/anat/sub-juntendo750w06_T1w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-juntendo750w06/anat/sub-juntendo750w06_space-other_T1w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-juntendo750w06/anat/sub-juntendo750w06_T1w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-juntendo750w06/anat/sub-juntendo750w06_space-other_T1w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-juntendo750w06/anat/sub-juntendo750w06_T1w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-juntendo750w06/anat/sub-juntendo750w06_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-juntendo750w06/anat/sub-juntendo750w06_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-juntendo750w06/anat/sub-juntendo750w06_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-juntendo750w06/anat/sub-juntendo750w06_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-juntendo750w06/anat/sub-juntendo750w06_T2star_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-juntendo750w06/anat/sub-juntendo750w06_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-juntendo750w06/anat/sub-juntendo750w06_T2star_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-juntendo750w06/anat/sub-juntendo750w06_space-other_T2w_label-discs_dlabel.json b/derivatives/labels/sub-juntendo750w06/anat/sub-juntendo750w06_T2w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-juntendo750w06/anat/sub-juntendo750w06_space-other_T2w_label-discs_dlabel.json rename to derivatives/labels/sub-juntendo750w06/anat/sub-juntendo750w06_T2w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-juntendo750w06/anat/sub-juntendo750w06_space-other_T2w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-juntendo750w06/anat/sub-juntendo750w06_T2w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-juntendo750w06/anat/sub-juntendo750w06_space-other_T2w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-juntendo750w06/anat/sub-juntendo750w06_T2w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-juntendo750w06/anat/sub-juntendo750w06_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-juntendo750w06/anat/sub-juntendo750w06_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-juntendo750w06/anat/sub-juntendo750w06_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-juntendo750w06/anat/sub-juntendo750w06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-juntendo750w06/anat/sub-juntendo750w06_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-juntendo750w06/anat/sub-juntendo750w06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-juntendo750w06/anat/sub-juntendo750w06_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-juntendo750w06/anat/sub-juntendo750w06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-juntendo750w06/anat/sub-juntendo750w06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-juntendo750w06/anat/sub-juntendo750w06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-juntendo750w06/anat/sub-juntendo750w06_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-juntendo750w06/anat/sub-juntendo750w06_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-juntendo750w06/anat/sub-juntendo750w06_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-juntendo750w06/anat/sub-juntendo750w06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-juntendo750w06/anat/sub-juntendo750w06_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-juntendo750w06/anat/sub-juntendo750w06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-juntendo750w06/anat/sub-juntendo750w06_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-juntendo750w06/anat/sub-juntendo750w06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-juntendo750w06/anat/sub-juntendo750w06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-juntendo750w06/anat/sub-juntendo750w06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-juntendo750w06/anat/sub-juntendo750w06_space-other_T2star_label-SC_seg.nii.gz b/derivatives/labels/sub-juntendo750w06/anat/sub-juntendo750w06_space-other_T2star_label-SC_seg.nii.gz index f66e0a1edc..38ae9d5b0d 100644 --- a/derivatives/labels/sub-juntendo750w06/anat/sub-juntendo750w06_space-other_T2star_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-juntendo750w06/anat/sub-juntendo750w06_space-other_T2star_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s14961--d3e6c427b125b7d88383f15e01885b7a312e750c6a23d42e4c89ca9129c4e46c.nii.gz +/annex/objects/SHA256E-s14982--2d0df9c62a1b7cbf4e14352253cfba7eaa8e4d6d1a93669ca898114bdaeb4932.nii.gz diff --git a/derivatives/labels/sub-juntendo750w06/anat/sub-juntendo750w06_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-juntendo750w06/anat/sub-juntendo750w06_space-other_T2star_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-juntendo750w06/anat/sub-juntendo750w06_space-other_T2star_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-mgh01/anat/sub-mgh01_space-other_T1w_label-discs_dlabel.json b/derivatives/labels/sub-mgh01/anat/sub-mgh01_T1w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-mgh01/anat/sub-mgh01_space-other_T1w_label-discs_dlabel.json rename to derivatives/labels/sub-mgh01/anat/sub-mgh01_T1w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-mgh01/anat/sub-mgh01_space-other_T1w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-mgh01/anat/sub-mgh01_T1w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-mgh01/anat/sub-mgh01_space-other_T1w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-mgh01/anat/sub-mgh01_T1w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-mgh01/anat/sub-mgh01_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-mgh01/anat/sub-mgh01_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-mgh01/anat/sub-mgh01_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-mgh01/anat/sub-mgh01_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-mgh01/anat/sub-mgh01_T2star_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-mgh01/anat/sub-mgh01_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-mgh01/anat/sub-mgh01_T2star_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-mgh01/anat/sub-mgh01_space-other_T2w_label-discs_dlabel.json b/derivatives/labels/sub-mgh01/anat/sub-mgh01_T2w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-mgh01/anat/sub-mgh01_space-other_T2w_label-discs_dlabel.json rename to derivatives/labels/sub-mgh01/anat/sub-mgh01_T2w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-mgh01/anat/sub-mgh01_space-other_T2w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-mgh01/anat/sub-mgh01_T2w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-mgh01/anat/sub-mgh01_space-other_T2w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-mgh01/anat/sub-mgh01_T2w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-mgh01/anat/sub-mgh01_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-mgh01/anat/sub-mgh01_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-mgh01/anat/sub-mgh01_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-mgh01/anat/sub-mgh01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-mgh01/anat/sub-mgh01_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-mgh01/anat/sub-mgh01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-mgh01/anat/sub-mgh01_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-mgh01/anat/sub-mgh01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-mgh01/anat/sub-mgh01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-mgh01/anat/sub-mgh01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-mgh01/anat/sub-mgh01_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-mgh01/anat/sub-mgh01_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-mgh01/anat/sub-mgh01_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-mgh01/anat/sub-mgh01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-mgh01/anat/sub-mgh01_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-mgh01/anat/sub-mgh01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-mgh01/anat/sub-mgh01_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-mgh01/anat/sub-mgh01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-mgh01/anat/sub-mgh01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-mgh01/anat/sub-mgh01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-mgh01/anat/sub-mgh01_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.json b/derivatives/labels/sub-mgh01/anat/sub-mgh01_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.json new file mode 100644 index 0000000000..e537a137e5 --- /dev/null +++ b/derivatives/labels/sub-mgh01/anat/sub-mgh01_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.json @@ -0,0 +1,11 @@ +{ + "SpatialReference": { + "Orientation": "RPI", + "Resampling": "1x1x1" + }, + "GeneratedBy": [ + { + "Description": "Manual label of C2 and C5 mid-vertebrae, at the center of the spinal cord." + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-mgh01/anat/sub-mgh01_space-other_T1w_RPI_r_labels-manual.nii.gz b/derivatives/labels/sub-mgh01/anat/sub-mgh01_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-mgh01/anat/sub-mgh01_space-other_T1w_RPI_r_labels-manual.nii.gz rename to derivatives/labels/sub-mgh01/anat/sub-mgh01_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.nii.gz diff --git a/derivatives/labels/sub-mgh01/anat/sub-mgh01_space-other_T2star_label-SC_seg.nii.gz b/derivatives/labels/sub-mgh01/anat/sub-mgh01_space-other_T2star_label-SC_seg.nii.gz index 54d1806bce..d48cf07fd6 100644 --- a/derivatives/labels/sub-mgh01/anat/sub-mgh01_space-other_T2star_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-mgh01/anat/sub-mgh01_space-other_T2star_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s14921--dba677e5060f5e00f7a4544c8e7eb77fc496d5a20197cc25a7a276b577fba543.nii.gz +/annex/objects/SHA256E-s14942--6e92d9cc3af8a41473b9ad0ddb66cfcb8d10dd50373f48528ab5f397fd02f0d9.nii.gz diff --git a/derivatives/labels/sub-mgh01/anat/sub-mgh01_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-mgh01/anat/sub-mgh01_space-other_T2star_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-mgh01/anat/sub-mgh01_space-other_T2star_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-mgh02/anat/sub-mgh02_space-other_T1w_label-discs_dlabel.json b/derivatives/labels/sub-mgh02/anat/sub-mgh02_T1w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-mgh02/anat/sub-mgh02_space-other_T1w_label-discs_dlabel.json rename to derivatives/labels/sub-mgh02/anat/sub-mgh02_T1w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-mgh02/anat/sub-mgh02_space-other_T1w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-mgh02/anat/sub-mgh02_T1w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-mgh02/anat/sub-mgh02_space-other_T1w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-mgh02/anat/sub-mgh02_T1w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-mgh02/anat/sub-mgh02_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-mgh02/anat/sub-mgh02_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-mgh02/anat/sub-mgh02_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-mgh02/anat/sub-mgh02_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-mgh02/anat/sub-mgh02_T2star_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-mgh02/anat/sub-mgh02_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-mgh02/anat/sub-mgh02_T2star_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-mgh02/anat/sub-mgh02_space-other_T2w_label-discs_dlabel.json b/derivatives/labels/sub-mgh02/anat/sub-mgh02_T2w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-mgh02/anat/sub-mgh02_space-other_T2w_label-discs_dlabel.json rename to derivatives/labels/sub-mgh02/anat/sub-mgh02_T2w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-mgh02/anat/sub-mgh02_space-other_T2w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-mgh02/anat/sub-mgh02_T2w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-mgh02/anat/sub-mgh02_space-other_T2w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-mgh02/anat/sub-mgh02_T2w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-mgh02/anat/sub-mgh02_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-mgh02/anat/sub-mgh02_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-mgh02/anat/sub-mgh02_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-mgh02/anat/sub-mgh02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-mgh02/anat/sub-mgh02_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-mgh02/anat/sub-mgh02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-mgh02/anat/sub-mgh02_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-mgh02/anat/sub-mgh02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-mgh02/anat/sub-mgh02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-mgh02/anat/sub-mgh02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-mgh02/anat/sub-mgh02_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-mgh02/anat/sub-mgh02_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-mgh02/anat/sub-mgh02_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-mgh02/anat/sub-mgh02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-mgh02/anat/sub-mgh02_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-mgh02/anat/sub-mgh02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-mgh02/anat/sub-mgh02_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-mgh02/anat/sub-mgh02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-mgh02/anat/sub-mgh02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-mgh02/anat/sub-mgh02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-mgh02/anat/sub-mgh02_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.json b/derivatives/labels/sub-mgh02/anat/sub-mgh02_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.json new file mode 100644 index 0000000000..e537a137e5 --- /dev/null +++ b/derivatives/labels/sub-mgh02/anat/sub-mgh02_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.json @@ -0,0 +1,11 @@ +{ + "SpatialReference": { + "Orientation": "RPI", + "Resampling": "1x1x1" + }, + "GeneratedBy": [ + { + "Description": "Manual label of C2 and C5 mid-vertebrae, at the center of the spinal cord." + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-mgh02/anat/sub-mgh02_space-other_T1w_RPI_r_labels-manual.nii.gz b/derivatives/labels/sub-mgh02/anat/sub-mgh02_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-mgh02/anat/sub-mgh02_space-other_T1w_RPI_r_labels-manual.nii.gz rename to derivatives/labels/sub-mgh02/anat/sub-mgh02_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.nii.gz diff --git a/derivatives/labels/sub-mgh02/anat/sub-mgh02_space-other_T2star_label-SC_seg.nii.gz b/derivatives/labels/sub-mgh02/anat/sub-mgh02_space-other_T2star_label-SC_seg.nii.gz index 3d5226cc7f..b821903eb4 100644 --- a/derivatives/labels/sub-mgh02/anat/sub-mgh02_space-other_T2star_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-mgh02/anat/sub-mgh02_space-other_T2star_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s14819--1016eae80a7a84a625d7d47838b3ea0206ed0de2c64532128724794dbd73e4c8.nii.gz +/annex/objects/SHA256E-s14840--acc40d45abd589714d1bd8341418a0ca4eb649cbd37c929b2592d7791f000bd5.nii.gz diff --git a/derivatives/labels/sub-mgh02/anat/sub-mgh02_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-mgh02/anat/sub-mgh02_space-other_T2star_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-mgh02/anat/sub-mgh02_space-other_T2star_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-mgh03/anat/sub-mgh03_space-other_T1w_label-discs_dlabel.json b/derivatives/labels/sub-mgh03/anat/sub-mgh03_T1w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-mgh03/anat/sub-mgh03_space-other_T1w_label-discs_dlabel.json rename to derivatives/labels/sub-mgh03/anat/sub-mgh03_T1w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-mgh03/anat/sub-mgh03_space-other_T1w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-mgh03/anat/sub-mgh03_T1w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-mgh03/anat/sub-mgh03_space-other_T1w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-mgh03/anat/sub-mgh03_T1w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-mgh03/anat/sub-mgh03_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-mgh03/anat/sub-mgh03_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-mgh03/anat/sub-mgh03_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-mgh03/anat/sub-mgh03_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-mgh03/anat/sub-mgh03_T2star_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-mgh03/anat/sub-mgh03_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-mgh03/anat/sub-mgh03_T2star_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-mgh03/anat/sub-mgh03_space-other_T2w_label-discs_dlabel.json b/derivatives/labels/sub-mgh03/anat/sub-mgh03_T2w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-mgh03/anat/sub-mgh03_space-other_T2w_label-discs_dlabel.json rename to derivatives/labels/sub-mgh03/anat/sub-mgh03_T2w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-mgh03/anat/sub-mgh03_space-other_T2w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-mgh03/anat/sub-mgh03_T2w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-mgh03/anat/sub-mgh03_space-other_T2w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-mgh03/anat/sub-mgh03_T2w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-mgh03/anat/sub-mgh03_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-mgh03/anat/sub-mgh03_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-mgh03/anat/sub-mgh03_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-mgh03/anat/sub-mgh03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-mgh03/anat/sub-mgh03_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-mgh03/anat/sub-mgh03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-mgh03/anat/sub-mgh03_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-mgh03/anat/sub-mgh03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-mgh03/anat/sub-mgh03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-mgh03/anat/sub-mgh03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-mgh03/anat/sub-mgh03_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-mgh03/anat/sub-mgh03_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-mgh03/anat/sub-mgh03_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-mgh03/anat/sub-mgh03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-mgh03/anat/sub-mgh03_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-mgh03/anat/sub-mgh03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-mgh03/anat/sub-mgh03_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-mgh03/anat/sub-mgh03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-mgh03/anat/sub-mgh03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-mgh03/anat/sub-mgh03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-mgh03/anat/sub-mgh03_space-other_T2star_label-SC_seg.nii.gz b/derivatives/labels/sub-mgh03/anat/sub-mgh03_space-other_T2star_label-SC_seg.nii.gz index c2a38ccb83..df47a9f86a 100644 --- a/derivatives/labels/sub-mgh03/anat/sub-mgh03_space-other_T2star_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-mgh03/anat/sub-mgh03_space-other_T2star_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s14905--eccc0dd260090d8bce27c078f0bec9ae5ae6e4a5fe9983228217a583bded6e18.nii.gz +/annex/objects/SHA256E-s14926--19982af6ff67718cb16c580c2e07a8caddc79ac973a2f8625619023ee70e872e.nii.gz diff --git a/derivatives/labels/sub-mgh03/anat/sub-mgh03_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-mgh03/anat/sub-mgh03_space-other_T2star_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-mgh03/anat/sub-mgh03_space-other_T2star_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-mgh04/anat/sub-mgh04_space-other_T1w_label-discs_dlabel.json b/derivatives/labels/sub-mgh04/anat/sub-mgh04_T1w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-mgh04/anat/sub-mgh04_space-other_T1w_label-discs_dlabel.json rename to derivatives/labels/sub-mgh04/anat/sub-mgh04_T1w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-mgh04/anat/sub-mgh04_space-other_T1w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-mgh04/anat/sub-mgh04_T1w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-mgh04/anat/sub-mgh04_space-other_T1w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-mgh04/anat/sub-mgh04_T1w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-mgh04/anat/sub-mgh04_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-mgh04/anat/sub-mgh04_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-mgh04/anat/sub-mgh04_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-mgh04/anat/sub-mgh04_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-mgh04/anat/sub-mgh04_T2star_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-mgh04/anat/sub-mgh04_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-mgh04/anat/sub-mgh04_T2star_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-mgh04/anat/sub-mgh04_space-other_T2w_label-discs_dlabel.json b/derivatives/labels/sub-mgh04/anat/sub-mgh04_T2w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-mgh04/anat/sub-mgh04_space-other_T2w_label-discs_dlabel.json rename to derivatives/labels/sub-mgh04/anat/sub-mgh04_T2w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-mgh04/anat/sub-mgh04_space-other_T2w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-mgh04/anat/sub-mgh04_T2w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-mgh04/anat/sub-mgh04_space-other_T2w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-mgh04/anat/sub-mgh04_T2w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-mgh04/anat/sub-mgh04_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-mgh04/anat/sub-mgh04_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-mgh04/anat/sub-mgh04_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-mgh04/anat/sub-mgh04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-mgh04/anat/sub-mgh04_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-mgh04/anat/sub-mgh04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-mgh04/anat/sub-mgh04_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-mgh04/anat/sub-mgh04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-mgh04/anat/sub-mgh04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-mgh04/anat/sub-mgh04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-mgh04/anat/sub-mgh04_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-mgh04/anat/sub-mgh04_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-mgh04/anat/sub-mgh04_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-mgh04/anat/sub-mgh04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-mgh04/anat/sub-mgh04_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-mgh04/anat/sub-mgh04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-mgh04/anat/sub-mgh04_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-mgh04/anat/sub-mgh04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-mgh04/anat/sub-mgh04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-mgh04/anat/sub-mgh04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-mgh04/anat/sub-mgh04_space-other_T2star_label-SC_seg.nii.gz b/derivatives/labels/sub-mgh04/anat/sub-mgh04_space-other_T2star_label-SC_seg.nii.gz index aa4d059837..1d9f0b6e89 100644 --- a/derivatives/labels/sub-mgh04/anat/sub-mgh04_space-other_T2star_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-mgh04/anat/sub-mgh04_space-other_T2star_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s14979--3612ccc978f7b92b7e54f1506d3ee21d75748ee68b2988f68ed76d38aeb264d8.nii.gz +/annex/objects/SHA256E-s15000--808f915e044e637146891eea2bc34f20a0a91b69996c29c4e618bdf317ecd2e6.nii.gz diff --git a/derivatives/labels/sub-mgh04/anat/sub-mgh04_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-mgh04/anat/sub-mgh04_space-other_T2star_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-mgh04/anat/sub-mgh04_space-other_T2star_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-mgh05/anat/sub-mgh05_space-other_T1w_label-discs_dlabel.json b/derivatives/labels/sub-mgh05/anat/sub-mgh05_T1w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-mgh05/anat/sub-mgh05_space-other_T1w_label-discs_dlabel.json rename to derivatives/labels/sub-mgh05/anat/sub-mgh05_T1w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-mgh05/anat/sub-mgh05_space-other_T1w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-mgh05/anat/sub-mgh05_T1w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-mgh05/anat/sub-mgh05_space-other_T1w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-mgh05/anat/sub-mgh05_T1w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-mgh05/anat/sub-mgh05_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-mgh05/anat/sub-mgh05_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-mgh05/anat/sub-mgh05_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-mgh05/anat/sub-mgh05_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-mgh05/anat/sub-mgh05_T2star_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-mgh05/anat/sub-mgh05_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-mgh05/anat/sub-mgh05_T2star_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-mgh05/anat/sub-mgh05_space-other_T2w_label-discs_dlabel.json b/derivatives/labels/sub-mgh05/anat/sub-mgh05_T2w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-mgh05/anat/sub-mgh05_space-other_T2w_label-discs_dlabel.json rename to derivatives/labels/sub-mgh05/anat/sub-mgh05_T2w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-mgh05/anat/sub-mgh05_space-other_T2w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-mgh05/anat/sub-mgh05_T2w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-mgh05/anat/sub-mgh05_space-other_T2w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-mgh05/anat/sub-mgh05_T2w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-mgh05/anat/sub-mgh05_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-mgh05/anat/sub-mgh05_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-mgh05/anat/sub-mgh05_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-mgh05/anat/sub-mgh05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-mgh05/anat/sub-mgh05_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-mgh05/anat/sub-mgh05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-mgh05/anat/sub-mgh05_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-mgh05/anat/sub-mgh05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-mgh05/anat/sub-mgh05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-mgh05/anat/sub-mgh05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-mgh05/anat/sub-mgh05_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-mgh05/anat/sub-mgh05_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-mgh05/anat/sub-mgh05_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-mgh05/anat/sub-mgh05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-mgh05/anat/sub-mgh05_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-mgh05/anat/sub-mgh05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-mgh05/anat/sub-mgh05_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-mgh05/anat/sub-mgh05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-mgh05/anat/sub-mgh05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-mgh05/anat/sub-mgh05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-mgh05/anat/sub-mgh05_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.json b/derivatives/labels/sub-mgh05/anat/sub-mgh05_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.json new file mode 100644 index 0000000000..e537a137e5 --- /dev/null +++ b/derivatives/labels/sub-mgh05/anat/sub-mgh05_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.json @@ -0,0 +1,11 @@ +{ + "SpatialReference": { + "Orientation": "RPI", + "Resampling": "1x1x1" + }, + "GeneratedBy": [ + { + "Description": "Manual label of C2 and C5 mid-vertebrae, at the center of the spinal cord." + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-mgh05/anat/sub-mgh05_space-other_T1w_RPI_r_labels-manual.nii.gz b/derivatives/labels/sub-mgh05/anat/sub-mgh05_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-mgh05/anat/sub-mgh05_space-other_T1w_RPI_r_labels-manual.nii.gz rename to derivatives/labels/sub-mgh05/anat/sub-mgh05_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.nii.gz diff --git a/derivatives/labels/sub-mgh05/anat/sub-mgh05_space-other_T2star_label-SC_seg.nii.gz b/derivatives/labels/sub-mgh05/anat/sub-mgh05_space-other_T2star_label-SC_seg.nii.gz index f2be3f307f..346458996e 100644 --- a/derivatives/labels/sub-mgh05/anat/sub-mgh05_space-other_T2star_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-mgh05/anat/sub-mgh05_space-other_T2star_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s14911--33a3c206ebdf13eb14cb3604f397e242673d66bc0c4fbc431eaf4d3151d711f3.nii.gz +/annex/objects/SHA256E-s14932--8dadc3d6a5af36b3f9bcdbddb97d2d1271c9f66199a3bcfa24324adb00cb6fbd.nii.gz diff --git a/derivatives/labels/sub-mgh05/anat/sub-mgh05_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-mgh05/anat/sub-mgh05_space-other_T2star_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-mgh05/anat/sub-mgh05_space-other_T2star_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-mgh06/anat/sub-mgh06_space-other_T1w_label-discs_dlabel.json b/derivatives/labels/sub-mgh06/anat/sub-mgh06_T1w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-mgh06/anat/sub-mgh06_space-other_T1w_label-discs_dlabel.json rename to derivatives/labels/sub-mgh06/anat/sub-mgh06_T1w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-mgh06/anat/sub-mgh06_space-other_T1w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-mgh06/anat/sub-mgh06_T1w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-mgh06/anat/sub-mgh06_space-other_T1w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-mgh06/anat/sub-mgh06_T1w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-mgh06/anat/sub-mgh06_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-mgh06/anat/sub-mgh06_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-mgh06/anat/sub-mgh06_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-mgh06/anat/sub-mgh06_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-mgh06/anat/sub-mgh06_T2star_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-mgh06/anat/sub-mgh06_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-mgh06/anat/sub-mgh06_T2star_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-mgh06/anat/sub-mgh06_space-other_T2w_label-discs_dlabel.json b/derivatives/labels/sub-mgh06/anat/sub-mgh06_T2w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-mgh06/anat/sub-mgh06_space-other_T2w_label-discs_dlabel.json rename to derivatives/labels/sub-mgh06/anat/sub-mgh06_T2w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-mgh06/anat/sub-mgh06_space-other_T2w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-mgh06/anat/sub-mgh06_T2w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-mgh06/anat/sub-mgh06_space-other_T2w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-mgh06/anat/sub-mgh06_T2w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-mgh06/anat/sub-mgh06_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-mgh06/anat/sub-mgh06_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-mgh06/anat/sub-mgh06_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-mgh06/anat/sub-mgh06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-mgh06/anat/sub-mgh06_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-mgh06/anat/sub-mgh06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-mgh06/anat/sub-mgh06_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-mgh06/anat/sub-mgh06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-mgh06/anat/sub-mgh06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-mgh06/anat/sub-mgh06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-mgh06/anat/sub-mgh06_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-mgh06/anat/sub-mgh06_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-mgh06/anat/sub-mgh06_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-mgh06/anat/sub-mgh06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-mgh06/anat/sub-mgh06_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-mgh06/anat/sub-mgh06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-mgh06/anat/sub-mgh06_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-mgh06/anat/sub-mgh06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-mgh06/anat/sub-mgh06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-mgh06/anat/sub-mgh06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-mgh06/anat/sub-mgh06_space-other_T2star_label-SC_seg.nii.gz b/derivatives/labels/sub-mgh06/anat/sub-mgh06_space-other_T2star_label-SC_seg.nii.gz index 971a294553..93d99a84e7 100644 --- a/derivatives/labels/sub-mgh06/anat/sub-mgh06_space-other_T2star_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-mgh06/anat/sub-mgh06_space-other_T2star_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s14803--8905616fa713be1f8476708758918e3a608dd4f24f7e3638d8438746ca99be97.nii.gz +/annex/objects/SHA256E-s14824--49fff64e6844acb260bea8484cd39255f7102c4b702f269f7008959bdb750703.nii.gz diff --git a/derivatives/labels/sub-mgh06/anat/sub-mgh06_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-mgh06/anat/sub-mgh06_space-other_T2star_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-mgh06/anat/sub-mgh06_space-other_T2star_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-milan01/anat/sub-milan01_space-other_T1w_label-discs_dlabel.json b/derivatives/labels/sub-milan01/anat/sub-milan01_T1w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-milan01/anat/sub-milan01_space-other_T1w_label-discs_dlabel.json rename to derivatives/labels/sub-milan01/anat/sub-milan01_T1w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-milan01/anat/sub-milan01_space-other_T1w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-milan01/anat/sub-milan01_T1w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-milan01/anat/sub-milan01_space-other_T1w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-milan01/anat/sub-milan01_T1w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-milan01/anat/sub-milan01_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-milan01/anat/sub-milan01_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-milan01/anat/sub-milan01_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-milan01/anat/sub-milan01_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-milan01/anat/sub-milan01_T2star_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-milan01/anat/sub-milan01_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-milan01/anat/sub-milan01_T2star_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-milan01/anat/sub-milan01_space-other_T2w_label-discs_dlabel.json b/derivatives/labels/sub-milan01/anat/sub-milan01_T2w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-milan01/anat/sub-milan01_space-other_T2w_label-discs_dlabel.json rename to derivatives/labels/sub-milan01/anat/sub-milan01_T2w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-milan01/anat/sub-milan01_space-other_T2w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-milan01/anat/sub-milan01_T2w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-milan01/anat/sub-milan01_space-other_T2w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-milan01/anat/sub-milan01_T2w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-milan01/anat/sub-milan01_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-milan01/anat/sub-milan01_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-milan01/anat/sub-milan01_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-milan01/anat/sub-milan01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-milan01/anat/sub-milan01_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-milan01/anat/sub-milan01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-milan01/anat/sub-milan01_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-milan01/anat/sub-milan01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-milan01/anat/sub-milan01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-milan01/anat/sub-milan01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-milan01/anat/sub-milan01_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-milan01/anat/sub-milan01_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-milan01/anat/sub-milan01_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-milan01/anat/sub-milan01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-milan01/anat/sub-milan01_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-milan01/anat/sub-milan01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-milan01/anat/sub-milan01_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-milan01/anat/sub-milan01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-milan01/anat/sub-milan01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-milan01/anat/sub-milan01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-milan01/anat/sub-milan01_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.json b/derivatives/labels/sub-milan01/anat/sub-milan01_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.json new file mode 100644 index 0000000000..e537a137e5 --- /dev/null +++ b/derivatives/labels/sub-milan01/anat/sub-milan01_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.json @@ -0,0 +1,11 @@ +{ + "SpatialReference": { + "Orientation": "RPI", + "Resampling": "1x1x1" + }, + "GeneratedBy": [ + { + "Description": "Manual label of C2 and C5 mid-vertebrae, at the center of the spinal cord." + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-milan01/anat/sub-milan01_space-other_T1w_RPI_r_labels-manual.nii.gz b/derivatives/labels/sub-milan01/anat/sub-milan01_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-milan01/anat/sub-milan01_space-other_T1w_RPI_r_labels-manual.nii.gz rename to derivatives/labels/sub-milan01/anat/sub-milan01_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.nii.gz diff --git a/derivatives/labels/sub-milan01/anat/sub-milan01_space-other_T2star_label-SC_seg.nii.gz b/derivatives/labels/sub-milan01/anat/sub-milan01_space-other_T2star_label-SC_seg.nii.gz index f64a3eb342..f1ec99517a 100644 --- a/derivatives/labels/sub-milan01/anat/sub-milan01_space-other_T2star_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-milan01/anat/sub-milan01_space-other_T2star_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s14769--112e2f1073d0453321c82556f4f13d4c8e05addefbfbd6eb839c40c83bddf7ae.nii.gz +/annex/objects/SHA256E-s14790--7705f6ebd03cb114b1a0f4553a6984068fc7a29714093238b349b2eca11aa648.nii.gz diff --git a/derivatives/labels/sub-milan01/anat/sub-milan01_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-milan01/anat/sub-milan01_space-other_T2star_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-milan01/anat/sub-milan01_space-other_T2star_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-milan02/anat/sub-milan02_space-other_T1w_label-discs_dlabel.json b/derivatives/labels/sub-milan02/anat/sub-milan02_T1w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-milan02/anat/sub-milan02_space-other_T1w_label-discs_dlabel.json rename to derivatives/labels/sub-milan02/anat/sub-milan02_T1w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-milan02/anat/sub-milan02_space-other_T1w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-milan02/anat/sub-milan02_T1w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-milan02/anat/sub-milan02_space-other_T1w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-milan02/anat/sub-milan02_T1w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-milan02/anat/sub-milan02_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-milan02/anat/sub-milan02_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-milan02/anat/sub-milan02_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-milan02/anat/sub-milan02_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-milan02/anat/sub-milan02_T2star_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-milan02/anat/sub-milan02_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-milan02/anat/sub-milan02_T2star_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-milan02/anat/sub-milan02_space-other_T2w_label-discs_dlabel.json b/derivatives/labels/sub-milan02/anat/sub-milan02_T2w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-milan02/anat/sub-milan02_space-other_T2w_label-discs_dlabel.json rename to derivatives/labels/sub-milan02/anat/sub-milan02_T2w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-milan02/anat/sub-milan02_space-other_T2w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-milan02/anat/sub-milan02_T2w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-milan02/anat/sub-milan02_space-other_T2w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-milan02/anat/sub-milan02_T2w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-milan02/anat/sub-milan02_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-milan02/anat/sub-milan02_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-milan02/anat/sub-milan02_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-milan02/anat/sub-milan02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-milan02/anat/sub-milan02_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-milan02/anat/sub-milan02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-milan02/anat/sub-milan02_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-milan02/anat/sub-milan02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-milan02/anat/sub-milan02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-milan02/anat/sub-milan02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-milan02/anat/sub-milan02_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-milan02/anat/sub-milan02_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-milan02/anat/sub-milan02_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-milan02/anat/sub-milan02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-milan02/anat/sub-milan02_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-milan02/anat/sub-milan02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-milan02/anat/sub-milan02_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-milan02/anat/sub-milan02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-milan02/anat/sub-milan02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-milan02/anat/sub-milan02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-milan02/anat/sub-milan02_space-other_T2star_label-SC_seg.nii.gz b/derivatives/labels/sub-milan02/anat/sub-milan02_space-other_T2star_label-SC_seg.nii.gz index 5ea919bd28..6fa9a89ddf 100644 --- a/derivatives/labels/sub-milan02/anat/sub-milan02_space-other_T2star_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-milan02/anat/sub-milan02_space-other_T2star_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s14715--ba547dc9589de919c0f7afebc19b4837361d554a67130e2dfc279484b5911d15.nii.gz +/annex/objects/SHA256E-s14736--4af713a9cdcc3adfbb89effd8960575710357817799d70a454c41b89b6357530.nii.gz diff --git a/derivatives/labels/sub-milan02/anat/sub-milan02_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-milan02/anat/sub-milan02_space-other_T2star_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-milan02/anat/sub-milan02_space-other_T2star_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-milan03/anat/sub-milan03_space-other_T1w_label-discs_dlabel.json b/derivatives/labels/sub-milan03/anat/sub-milan03_T1w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-milan03/anat/sub-milan03_space-other_T1w_label-discs_dlabel.json rename to derivatives/labels/sub-milan03/anat/sub-milan03_T1w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-milan03/anat/sub-milan03_space-other_T1w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-milan03/anat/sub-milan03_T1w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-milan03/anat/sub-milan03_space-other_T1w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-milan03/anat/sub-milan03_T1w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-milan03/anat/sub-milan03_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-milan03/anat/sub-milan03_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-milan03/anat/sub-milan03_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-milan03/anat/sub-milan03_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-milan03/anat/sub-milan03_T2star_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-milan03/anat/sub-milan03_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-milan03/anat/sub-milan03_T2star_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-milan03/anat/sub-milan03_space-other_T2w_label-discs_dlabel.json b/derivatives/labels/sub-milan03/anat/sub-milan03_T2w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-milan03/anat/sub-milan03_space-other_T2w_label-discs_dlabel.json rename to derivatives/labels/sub-milan03/anat/sub-milan03_T2w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-milan03/anat/sub-milan03_space-other_T2w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-milan03/anat/sub-milan03_T2w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-milan03/anat/sub-milan03_space-other_T2w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-milan03/anat/sub-milan03_T2w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-milan03/anat/sub-milan03_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-milan03/anat/sub-milan03_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-milan03/anat/sub-milan03_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-milan03/anat/sub-milan03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-milan03/anat/sub-milan03_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-milan03/anat/sub-milan03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-milan03/anat/sub-milan03_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-milan03/anat/sub-milan03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-milan03/anat/sub-milan03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-milan03/anat/sub-milan03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-milan03/anat/sub-milan03_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-milan03/anat/sub-milan03_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-milan03/anat/sub-milan03_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-milan03/anat/sub-milan03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-milan03/anat/sub-milan03_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-milan03/anat/sub-milan03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-milan03/anat/sub-milan03_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-milan03/anat/sub-milan03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-milan03/anat/sub-milan03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-milan03/anat/sub-milan03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-milan03/anat/sub-milan03_space-other_T2star_label-SC_seg.nii.gz b/derivatives/labels/sub-milan03/anat/sub-milan03_space-other_T2star_label-SC_seg.nii.gz index 5a25dd432b..479cfc0957 100644 --- a/derivatives/labels/sub-milan03/anat/sub-milan03_space-other_T2star_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-milan03/anat/sub-milan03_space-other_T2star_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s14659--362e9d78c58b0adccddb9b5614e187778118957623b77795fef80fcfca900631.nii.gz +/annex/objects/SHA256E-s14680--fb5049a697c59bba914d32e6afcc4a32794b958115a5d8dbc98ea77b350be436.nii.gz diff --git a/derivatives/labels/sub-milan03/anat/sub-milan03_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-milan03/anat/sub-milan03_space-other_T2star_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-milan03/anat/sub-milan03_space-other_T2star_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-milan04/anat/sub-milan04_space-other_T1w_label-discs_dlabel.json b/derivatives/labels/sub-milan04/anat/sub-milan04_T1w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-milan04/anat/sub-milan04_space-other_T1w_label-discs_dlabel.json rename to derivatives/labels/sub-milan04/anat/sub-milan04_T1w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-milan04/anat/sub-milan04_space-other_T1w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-milan04/anat/sub-milan04_T1w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-milan04/anat/sub-milan04_space-other_T1w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-milan04/anat/sub-milan04_T1w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-milan04/anat/sub-milan04_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-milan04/anat/sub-milan04_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-milan04/anat/sub-milan04_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-milan04/anat/sub-milan04_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-milan04/anat/sub-milan04_T2star_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-milan04/anat/sub-milan04_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-milan04/anat/sub-milan04_T2star_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-milan04/anat/sub-milan04_space-other_T2w_label-discs_dlabel.json b/derivatives/labels/sub-milan04/anat/sub-milan04_T2w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-milan04/anat/sub-milan04_space-other_T2w_label-discs_dlabel.json rename to derivatives/labels/sub-milan04/anat/sub-milan04_T2w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-milan04/anat/sub-milan04_space-other_T2w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-milan04/anat/sub-milan04_T2w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-milan04/anat/sub-milan04_space-other_T2w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-milan04/anat/sub-milan04_T2w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-milan04/anat/sub-milan04_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-milan04/anat/sub-milan04_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-milan04/anat/sub-milan04_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-milan04/anat/sub-milan04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-milan04/anat/sub-milan04_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-milan04/anat/sub-milan04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-milan04/anat/sub-milan04_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-milan04/anat/sub-milan04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-milan04/anat/sub-milan04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-milan04/anat/sub-milan04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-milan04/anat/sub-milan04_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-milan04/anat/sub-milan04_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-milan04/anat/sub-milan04_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-milan04/anat/sub-milan04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-milan04/anat/sub-milan04_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-milan04/anat/sub-milan04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-milan04/anat/sub-milan04_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-milan04/anat/sub-milan04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-milan04/anat/sub-milan04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-milan04/anat/sub-milan04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { 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deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-milan04/anat/sub-milan04_space-other_T2star_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-milan05/anat/sub-milan05_space-other_T1w_label-discs_dlabel.json b/derivatives/labels/sub-milan05/anat/sub-milan05_T1w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-milan05/anat/sub-milan05_space-other_T1w_label-discs_dlabel.json rename to derivatives/labels/sub-milan05/anat/sub-milan05_T1w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-milan05/anat/sub-milan05_space-other_T1w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-milan05/anat/sub-milan05_T1w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-milan05/anat/sub-milan05_space-other_T1w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-milan05/anat/sub-milan05_T1w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-milan05/anat/sub-milan05_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-milan05/anat/sub-milan05_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-milan05/anat/sub-milan05_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-milan05/anat/sub-milan05_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-milan05/anat/sub-milan05_T2star_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-milan05/anat/sub-milan05_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-milan05/anat/sub-milan05_T2star_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-milan05/anat/sub-milan05_space-other_T2w_label-discs_dlabel.json b/derivatives/labels/sub-milan05/anat/sub-milan05_T2w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-milan05/anat/sub-milan05_space-other_T2w_label-discs_dlabel.json rename to derivatives/labels/sub-milan05/anat/sub-milan05_T2w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-milan05/anat/sub-milan05_space-other_T2w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-milan05/anat/sub-milan05_T2w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-milan05/anat/sub-milan05_space-other_T2w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-milan05/anat/sub-milan05_T2w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-milan05/anat/sub-milan05_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-milan05/anat/sub-milan05_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-milan05/anat/sub-milan05_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-milan05/anat/sub-milan05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-milan05/anat/sub-milan05_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-milan05/anat/sub-milan05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-milan05/anat/sub-milan05_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-milan05/anat/sub-milan05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-milan05/anat/sub-milan05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-milan05/anat/sub-milan05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-milan05/anat/sub-milan05_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-milan05/anat/sub-milan05_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-milan05/anat/sub-milan05_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-milan05/anat/sub-milan05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-milan05/anat/sub-milan05_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-milan05/anat/sub-milan05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-milan05/anat/sub-milan05_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-milan05/anat/sub-milan05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-milan05/anat/sub-milan05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-milan05/anat/sub-milan05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-milan05/anat/sub-milan05_space-other_T2star_label-SC_seg.nii.gz b/derivatives/labels/sub-milan05/anat/sub-milan05_space-other_T2star_label-SC_seg.nii.gz index 160e4737eb..b19c0261ca 100644 --- a/derivatives/labels/sub-milan05/anat/sub-milan05_space-other_T2star_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-milan05/anat/sub-milan05_space-other_T2star_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s14859--bf915405f57bc37386670719cd87fb7556bea8259f0b1cd5533a55cb8a538bcd.nii.gz +/annex/objects/SHA256E-s14879--5971f9e1d05d1f9b95bf420b644be8900c3c85c13e39ae3e874681eec349c20c.nii.gz diff --git a/derivatives/labels/sub-milan05/anat/sub-milan05_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-milan05/anat/sub-milan05_space-other_T2star_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-milan05/anat/sub-milan05_space-other_T2star_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-milan06/anat/sub-milan06_space-other_T1w_label-discs_dlabel.json b/derivatives/labels/sub-milan06/anat/sub-milan06_T1w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-milan06/anat/sub-milan06_space-other_T1w_label-discs_dlabel.json rename to derivatives/labels/sub-milan06/anat/sub-milan06_T1w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-milan06/anat/sub-milan06_space-other_T1w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-milan06/anat/sub-milan06_T1w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-milan06/anat/sub-milan06_space-other_T1w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-milan06/anat/sub-milan06_T1w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-milan06/anat/sub-milan06_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-milan06/anat/sub-milan06_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-milan06/anat/sub-milan06_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-milan06/anat/sub-milan06_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-milan06/anat/sub-milan06_T2star_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-milan06/anat/sub-milan06_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-milan06/anat/sub-milan06_T2star_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-milan06/anat/sub-milan06_space-other_T2w_label-discs_dlabel.json b/derivatives/labels/sub-milan06/anat/sub-milan06_T2w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-milan06/anat/sub-milan06_space-other_T2w_label-discs_dlabel.json rename to derivatives/labels/sub-milan06/anat/sub-milan06_T2w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-milan06/anat/sub-milan06_space-other_T2w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-milan06/anat/sub-milan06_T2w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-milan06/anat/sub-milan06_space-other_T2w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-milan06/anat/sub-milan06_T2w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-milan06/anat/sub-milan06_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-milan06/anat/sub-milan06_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-milan06/anat/sub-milan06_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-milan06/anat/sub-milan06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-milan06/anat/sub-milan06_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-milan06/anat/sub-milan06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-milan06/anat/sub-milan06_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-milan06/anat/sub-milan06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-milan06/anat/sub-milan06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-milan06/anat/sub-milan06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-milan06/anat/sub-milan06_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-milan06/anat/sub-milan06_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-milan06/anat/sub-milan06_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-milan06/anat/sub-milan06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-milan06/anat/sub-milan06_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-milan06/anat/sub-milan06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-milan06/anat/sub-milan06_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-milan06/anat/sub-milan06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-milan06/anat/sub-milan06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-milan06/anat/sub-milan06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-milan06/anat/sub-milan06_space-other_T2star_label-SC_seg.nii.gz b/derivatives/labels/sub-milan06/anat/sub-milan06_space-other_T2star_label-SC_seg.nii.gz index d44f47696d..87c3e32ab1 100644 --- a/derivatives/labels/sub-milan06/anat/sub-milan06_space-other_T2star_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-milan06/anat/sub-milan06_space-other_T2star_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s14971--80dac952279f5366dddd07a8bcdc9ce5d9d3ebacef27059b880aff5ae5edd03c.nii.gz +/annex/objects/SHA256E-s14992--82162388043271043b9c3ad82f1ad999650b0275fb8d83834604b74b750fc56d.nii.gz diff --git a/derivatives/labels/sub-milan06/anat/sub-milan06_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-milan06/anat/sub-milan06_space-other_T2star_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-milan06/anat/sub-milan06_space-other_T2star_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-milan07/anat/sub-milan07_space-other_T1w_label-discs_dlabel.json b/derivatives/labels/sub-milan07/anat/sub-milan07_T1w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-milan07/anat/sub-milan07_space-other_T1w_label-discs_dlabel.json rename to derivatives/labels/sub-milan07/anat/sub-milan07_T1w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-milan07/anat/sub-milan07_space-other_T1w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-milan07/anat/sub-milan07_T1w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-milan07/anat/sub-milan07_space-other_T1w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-milan07/anat/sub-milan07_T1w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-milan07/anat/sub-milan07_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-milan07/anat/sub-milan07_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-milan07/anat/sub-milan07_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-milan07/anat/sub-milan07_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-milan07/anat/sub-milan07_T2star_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-milan07/anat/sub-milan07_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-milan07/anat/sub-milan07_T2star_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-milan07/anat/sub-milan07_space-other_T2w_label-discs_dlabel.json b/derivatives/labels/sub-milan07/anat/sub-milan07_T2w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-milan07/anat/sub-milan07_space-other_T2w_label-discs_dlabel.json rename to derivatives/labels/sub-milan07/anat/sub-milan07_T2w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-milan07/anat/sub-milan07_space-other_T2w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-milan07/anat/sub-milan07_T2w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-milan07/anat/sub-milan07_space-other_T2w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-milan07/anat/sub-milan07_T2w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-milan07/anat/sub-milan07_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-milan07/anat/sub-milan07_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-milan07/anat/sub-milan07_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-milan07/anat/sub-milan07_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-milan07/anat/sub-milan07_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-milan07/anat/sub-milan07_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-milan07/anat/sub-milan07_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-milan07/anat/sub-milan07_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-milan07/anat/sub-milan07_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-milan07/anat/sub-milan07_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-milan07/anat/sub-milan07_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-milan07/anat/sub-milan07_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-milan07/anat/sub-milan07_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-milan07/anat/sub-milan07_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-milan07/anat/sub-milan07_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-milan07/anat/sub-milan07_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-milan07/anat/sub-milan07_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-milan07/anat/sub-milan07_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-milan07/anat/sub-milan07_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-milan07/anat/sub-milan07_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-milan07/anat/sub-milan07_space-other_T2star_label-SC_seg.nii.gz b/derivatives/labels/sub-milan07/anat/sub-milan07_space-other_T2star_label-SC_seg.nii.gz index e662ec7995..c61d4522d2 100644 --- a/derivatives/labels/sub-milan07/anat/sub-milan07_space-other_T2star_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-milan07/anat/sub-milan07_space-other_T2star_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s14735--527221510c140cad60473089cd343f5d1757da416501b13349dcad60079dd49f.nii.gz +/annex/objects/SHA256E-s14756--f446782a071144ae9ced995be5f9d00bf5da5dacd9ca4e92507d3ec10e4a02b7.nii.gz diff --git a/derivatives/labels/sub-milan07/anat/sub-milan07_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-milan07/anat/sub-milan07_space-other_T2star_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-milan07/anat/sub-milan07_space-other_T2star_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-mniPilot1/anat/sub-mniPilot1_space-other_T1w_label-discs_dlabel.json b/derivatives/labels/sub-mniPilot1/anat/sub-mniPilot1_T1w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-mniPilot1/anat/sub-mniPilot1_space-other_T1w_label-discs_dlabel.json rename to derivatives/labels/sub-mniPilot1/anat/sub-mniPilot1_T1w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-mniPilot1/anat/sub-mniPilot1_space-other_T1w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-mniPilot1/anat/sub-mniPilot1_T1w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-mniPilot1/anat/sub-mniPilot1_space-other_T1w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-mniPilot1/anat/sub-mniPilot1_T1w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-mniPilot1/anat/sub-mniPilot1_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-mniPilot1/anat/sub-mniPilot1_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-mniPilot1/anat/sub-mniPilot1_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-mniPilot1/anat/sub-mniPilot1_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-mniPilot1/anat/sub-mniPilot1_T2star_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-mniPilot1/anat/sub-mniPilot1_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-mniPilot1/anat/sub-mniPilot1_T2star_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-mniPilot1/anat/sub-mniPilot1_space-other_T2w_label-discs_dlabel.json b/derivatives/labels/sub-mniPilot1/anat/sub-mniPilot1_T2w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-mniPilot1/anat/sub-mniPilot1_space-other_T2w_label-discs_dlabel.json rename to derivatives/labels/sub-mniPilot1/anat/sub-mniPilot1_T2w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-mniPilot1/anat/sub-mniPilot1_space-other_T2w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-mniPilot1/anat/sub-mniPilot1_T2w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-mniPilot1/anat/sub-mniPilot1_space-other_T2w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-mniPilot1/anat/sub-mniPilot1_T2w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-mniPilot1/anat/sub-mniPilot1_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-mniPilot1/anat/sub-mniPilot1_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-mniPilot1/anat/sub-mniPilot1_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-mniPilot1/anat/sub-mniPilot1_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-mniPilot1/anat/sub-mniPilot1_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-mniPilot1/anat/sub-mniPilot1_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-mniPilot1/anat/sub-mniPilot1_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-mniPilot1/anat/sub-mniPilot1_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-mniPilot1/anat/sub-mniPilot1_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-mniPilot1/anat/sub-mniPilot1_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-mniPilot1/anat/sub-mniPilot1_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-mniPilot1/anat/sub-mniPilot1_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-mniPilot1/anat/sub-mniPilot1_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-mniPilot1/anat/sub-mniPilot1_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-mniPilot1/anat/sub-mniPilot1_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-mniPilot1/anat/sub-mniPilot1_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-mniPilot1/anat/sub-mniPilot1_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-mniPilot1/anat/sub-mniPilot1_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-mniPilot1/anat/sub-mniPilot1_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-mniPilot1/anat/sub-mniPilot1_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-mniPilot1/anat/sub-mniPilot1_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.json b/derivatives/labels/sub-mniPilot1/anat/sub-mniPilot1_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.json new file mode 100644 index 0000000000..e537a137e5 --- /dev/null +++ b/derivatives/labels/sub-mniPilot1/anat/sub-mniPilot1_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.json @@ -0,0 +1,11 @@ +{ + "SpatialReference": { + "Orientation": "RPI", + "Resampling": "1x1x1" + }, + "GeneratedBy": [ + { + "Description": "Manual label of C2 and C5 mid-vertebrae, at the center of the spinal cord." + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-mniPilot1/anat/sub-mniPilot1_space-other_T1w_RPI_r_labels-manual.nii.gz b/derivatives/labels/sub-mniPilot1/anat/sub-mniPilot1_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-mniPilot1/anat/sub-mniPilot1_space-other_T1w_RPI_r_labels-manual.nii.gz rename to derivatives/labels/sub-mniPilot1/anat/sub-mniPilot1_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.nii.gz diff --git a/derivatives/labels/sub-mniPilot1/anat/sub-mniPilot1_space-other_T2star_label-SC_seg.nii.gz b/derivatives/labels/sub-mniPilot1/anat/sub-mniPilot1_space-other_T2star_label-SC_seg.nii.gz index 564d7146b6..43419d7e00 100644 --- a/derivatives/labels/sub-mniPilot1/anat/sub-mniPilot1_space-other_T2star_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-mniPilot1/anat/sub-mniPilot1_space-other_T2star_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s14826--c5905e7afe5b0caa954f499dc568b388d02493679301ee6598e3ec7af49ffd60.nii.gz +/annex/objects/SHA256E-s14847--d102d801a24a31355480fa8fc71ef81b29372a72303e11ee3f772a36a0c5cbaf.nii.gz diff --git a/derivatives/labels/sub-mniPilot1/anat/sub-mniPilot1_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-mniPilot1/anat/sub-mniPilot1_space-other_T2star_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-mniPilot1/anat/sub-mniPilot1_space-other_T2star_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-mniS01/anat/sub-mniS01_space-other_T1w_label-discs_dlabel.json b/derivatives/labels/sub-mniS01/anat/sub-mniS01_T1w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-mniS01/anat/sub-mniS01_space-other_T1w_label-discs_dlabel.json rename to derivatives/labels/sub-mniS01/anat/sub-mniS01_T1w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-mniS01/anat/sub-mniS01_space-other_T1w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-mniS01/anat/sub-mniS01_T1w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-mniS01/anat/sub-mniS01_space-other_T1w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-mniS01/anat/sub-mniS01_T1w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-mniS01/anat/sub-mniS01_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-mniS01/anat/sub-mniS01_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-mniS01/anat/sub-mniS01_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-mniS01/anat/sub-mniS01_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-mniS01/anat/sub-mniS01_T2star_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-mniS01/anat/sub-mniS01_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-mniS01/anat/sub-mniS01_T2star_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-mniS01/anat/sub-mniS01_space-other_T2w_label-discs_dlabel.json b/derivatives/labels/sub-mniS01/anat/sub-mniS01_T2w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-mniS01/anat/sub-mniS01_space-other_T2w_label-discs_dlabel.json rename to derivatives/labels/sub-mniS01/anat/sub-mniS01_T2w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-mniS01/anat/sub-mniS01_space-other_T2w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-mniS01/anat/sub-mniS01_T2w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-mniS01/anat/sub-mniS01_space-other_T2w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-mniS01/anat/sub-mniS01_T2w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-mniS01/anat/sub-mniS01_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-mniS01/anat/sub-mniS01_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-mniS01/anat/sub-mniS01_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-mniS01/anat/sub-mniS01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-mniS01/anat/sub-mniS01_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-mniS01/anat/sub-mniS01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-mniS01/anat/sub-mniS01_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-mniS01/anat/sub-mniS01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-mniS01/anat/sub-mniS01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-mniS01/anat/sub-mniS01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-mniS01/anat/sub-mniS01_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-mniS01/anat/sub-mniS01_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-mniS01/anat/sub-mniS01_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-mniS01/anat/sub-mniS01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-mniS01/anat/sub-mniS01_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-mniS01/anat/sub-mniS01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-mniS01/anat/sub-mniS01_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-mniS01/anat/sub-mniS01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-mniS01/anat/sub-mniS01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-mniS01/anat/sub-mniS01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-mniS01/anat/sub-mniS01_space-other_T2star_label-SC_seg.nii.gz b/derivatives/labels/sub-mniS01/anat/sub-mniS01_space-other_T2star_label-SC_seg.nii.gz index 879acd89b4..7a5a920efc 100644 --- a/derivatives/labels/sub-mniS01/anat/sub-mniS01_space-other_T2star_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-mniS01/anat/sub-mniS01_space-other_T2star_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s14970--24e50b2904e716c67f7fba1ed0cdd81d043ce4d0e12d3f8ed3501fa01ac2caa4.nii.gz +/annex/objects/SHA256E-s14991--523c1514e2abf4c16ff97ec3572e9577bba1e9a11e202e3e78838aadc26c3aa1.nii.gz diff --git a/derivatives/labels/sub-mniS01/anat/sub-mniS01_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-mniS01/anat/sub-mniS01_space-other_T2star_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-mniS01/anat/sub-mniS01_space-other_T2star_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-mniS02/anat/sub-mniS02_space-other_T1w_label-discs_dlabel.json b/derivatives/labels/sub-mniS02/anat/sub-mniS02_T1w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-mniS02/anat/sub-mniS02_space-other_T1w_label-discs_dlabel.json rename to derivatives/labels/sub-mniS02/anat/sub-mniS02_T1w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-mniS02/anat/sub-mniS02_space-other_T1w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-mniS02/anat/sub-mniS02_T1w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-mniS02/anat/sub-mniS02_space-other_T1w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-mniS02/anat/sub-mniS02_T1w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-mniS02/anat/sub-mniS02_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-mniS02/anat/sub-mniS02_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-mniS02/anat/sub-mniS02_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-mniS02/anat/sub-mniS02_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-mniS02/anat/sub-mniS02_T2star_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-mniS02/anat/sub-mniS02_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-mniS02/anat/sub-mniS02_T2star_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-mniS02/anat/sub-mniS02_space-other_T2w_label-discs_dlabel.json b/derivatives/labels/sub-mniS02/anat/sub-mniS02_T2w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-mniS02/anat/sub-mniS02_space-other_T2w_label-discs_dlabel.json rename to derivatives/labels/sub-mniS02/anat/sub-mniS02_T2w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-mniS02/anat/sub-mniS02_space-other_T2w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-mniS02/anat/sub-mniS02_T2w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-mniS02/anat/sub-mniS02_space-other_T2w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-mniS02/anat/sub-mniS02_T2w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-mniS02/anat/sub-mniS02_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-mniS02/anat/sub-mniS02_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-mniS02/anat/sub-mniS02_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-mniS02/anat/sub-mniS02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-mniS02/anat/sub-mniS02_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-mniS02/anat/sub-mniS02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-mniS02/anat/sub-mniS02_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-mniS02/anat/sub-mniS02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-mniS02/anat/sub-mniS02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-mniS02/anat/sub-mniS02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-mniS02/anat/sub-mniS02_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-mniS02/anat/sub-mniS02_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-mniS02/anat/sub-mniS02_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-mniS02/anat/sub-mniS02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-mniS02/anat/sub-mniS02_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-mniS02/anat/sub-mniS02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-mniS02/anat/sub-mniS02_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-mniS02/anat/sub-mniS02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-mniS02/anat/sub-mniS02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-mniS02/anat/sub-mniS02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-mniS02/anat/sub-mniS02_space-other_T2star_label-SC_seg.nii.gz b/derivatives/labels/sub-mniS02/anat/sub-mniS02_space-other_T2star_label-SC_seg.nii.gz index 130ee84d12..e6af8d31d3 100644 --- a/derivatives/labels/sub-mniS02/anat/sub-mniS02_space-other_T2star_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-mniS02/anat/sub-mniS02_space-other_T2star_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s14711--259801348e4370ff2c304a6e1048ce0ff823987195fa9d9ddd8010a8e5bc3f5e.nii.gz +/annex/objects/SHA256E-s14732--40e3c1685acd8a7b864583e3f1e5ebb4ef23e5501d2301c51432c7c2676b333a.nii.gz diff --git a/derivatives/labels/sub-mniS02/anat/sub-mniS02_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-mniS02/anat/sub-mniS02_space-other_T2star_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-mniS02/anat/sub-mniS02_space-other_T2star_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-mniS03/anat/sub-mniS03_space-other_T1w_label-discs_dlabel.json b/derivatives/labels/sub-mniS03/anat/sub-mniS03_T1w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-mniS03/anat/sub-mniS03_space-other_T1w_label-discs_dlabel.json rename to derivatives/labels/sub-mniS03/anat/sub-mniS03_T1w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-mniS03/anat/sub-mniS03_space-other_T1w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-mniS03/anat/sub-mniS03_T1w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-mniS03/anat/sub-mniS03_space-other_T1w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-mniS03/anat/sub-mniS03_T1w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-mniS03/anat/sub-mniS03_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-mniS03/anat/sub-mniS03_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-mniS03/anat/sub-mniS03_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-mniS03/anat/sub-mniS03_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-mniS03/anat/sub-mniS03_T2star_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-mniS03/anat/sub-mniS03_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-mniS03/anat/sub-mniS03_T2star_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-mniS03/anat/sub-mniS03_space-other_T2w_label-discs_dlabel.json b/derivatives/labels/sub-mniS03/anat/sub-mniS03_T2w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-mniS03/anat/sub-mniS03_space-other_T2w_label-discs_dlabel.json rename to derivatives/labels/sub-mniS03/anat/sub-mniS03_T2w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-mniS03/anat/sub-mniS03_space-other_T2w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-mniS03/anat/sub-mniS03_T2w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-mniS03/anat/sub-mniS03_space-other_T2w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-mniS03/anat/sub-mniS03_T2w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-mniS03/anat/sub-mniS03_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-mniS03/anat/sub-mniS03_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-mniS03/anat/sub-mniS03_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-mniS03/anat/sub-mniS03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-mniS03/anat/sub-mniS03_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-mniS03/anat/sub-mniS03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-mniS03/anat/sub-mniS03_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-mniS03/anat/sub-mniS03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-mniS03/anat/sub-mniS03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-mniS03/anat/sub-mniS03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-mniS03/anat/sub-mniS03_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-mniS03/anat/sub-mniS03_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-mniS03/anat/sub-mniS03_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-mniS03/anat/sub-mniS03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-mniS03/anat/sub-mniS03_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-mniS03/anat/sub-mniS03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-mniS03/anat/sub-mniS03_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-mniS03/anat/sub-mniS03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-mniS03/anat/sub-mniS03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-mniS03/anat/sub-mniS03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-mniS03/anat/sub-mniS03_space-other_T2star_label-SC_seg.nii.gz b/derivatives/labels/sub-mniS03/anat/sub-mniS03_space-other_T2star_label-SC_seg.nii.gz index 1362fc3f2e..bc9e679668 100644 --- a/derivatives/labels/sub-mniS03/anat/sub-mniS03_space-other_T2star_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-mniS03/anat/sub-mniS03_space-other_T2star_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s14682--a83b4fda26f926cc3ffb72e36aa3c569cf27bc6e04528ec81b7d3460999eccdf.nii.gz +/annex/objects/SHA256E-s14703--3306ce2a0ec783390224174adc075195fe9db6c4acfd30b47706827056dae47e.nii.gz diff --git a/derivatives/labels/sub-mniS03/anat/sub-mniS03_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-mniS03/anat/sub-mniS03_space-other_T2star_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-mniS03/anat/sub-mniS03_space-other_T2star_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-mniS04/anat/sub-mniS04_space-other_T1w_label-discs_dlabel.json b/derivatives/labels/sub-mniS04/anat/sub-mniS04_T1w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-mniS04/anat/sub-mniS04_space-other_T1w_label-discs_dlabel.json rename to derivatives/labels/sub-mniS04/anat/sub-mniS04_T1w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-mniS04/anat/sub-mniS04_space-other_T1w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-mniS04/anat/sub-mniS04_T1w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-mniS04/anat/sub-mniS04_space-other_T1w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-mniS04/anat/sub-mniS04_T1w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-mniS04/anat/sub-mniS04_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-mniS04/anat/sub-mniS04_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-mniS04/anat/sub-mniS04_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-mniS04/anat/sub-mniS04_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-mniS04/anat/sub-mniS04_T2star_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-mniS04/anat/sub-mniS04_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-mniS04/anat/sub-mniS04_T2star_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-mniS04/anat/sub-mniS04_space-other_T2w_label-discs_dlabel.json b/derivatives/labels/sub-mniS04/anat/sub-mniS04_T2w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-mniS04/anat/sub-mniS04_space-other_T2w_label-discs_dlabel.json rename to derivatives/labels/sub-mniS04/anat/sub-mniS04_T2w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-mniS04/anat/sub-mniS04_space-other_T2w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-mniS04/anat/sub-mniS04_T2w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-mniS04/anat/sub-mniS04_space-other_T2w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-mniS04/anat/sub-mniS04_T2w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-mniS04/anat/sub-mniS04_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-mniS04/anat/sub-mniS04_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-mniS04/anat/sub-mniS04_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-mniS04/anat/sub-mniS04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-mniS04/anat/sub-mniS04_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-mniS04/anat/sub-mniS04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-mniS04/anat/sub-mniS04_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-mniS04/anat/sub-mniS04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-mniS04/anat/sub-mniS04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-mniS04/anat/sub-mniS04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-mniS04/anat/sub-mniS04_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-mniS04/anat/sub-mniS04_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-mniS04/anat/sub-mniS04_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-mniS04/anat/sub-mniS04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-mniS04/anat/sub-mniS04_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-mniS04/anat/sub-mniS04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-mniS04/anat/sub-mniS04_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-mniS04/anat/sub-mniS04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-mniS04/anat/sub-mniS04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-mniS04/anat/sub-mniS04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-mniS04/anat/sub-mniS04_space-other_T2star_label-SC_seg.nii.gz b/derivatives/labels/sub-mniS04/anat/sub-mniS04_space-other_T2star_label-SC_seg.nii.gz index be8ee878ff..f49425bf7a 100644 --- a/derivatives/labels/sub-mniS04/anat/sub-mniS04_space-other_T2star_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-mniS04/anat/sub-mniS04_space-other_T2star_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s15126--5530fda69d25e7e2184afad7e4c34cbf1a8d49f03c1b315a14b3c2db768bb5bf.nii.gz +/annex/objects/SHA256E-s15147--88d99a6c8d6e91e5e18658a0cb211cfaafe673185c3110064d3e349bd2930951.nii.gz diff --git a/derivatives/labels/sub-mniS04/anat/sub-mniS04_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-mniS04/anat/sub-mniS04_space-other_T2star_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-mniS04/anat/sub-mniS04_space-other_T2star_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-mniS05/anat/sub-mniS05_space-other_T1w_label-discs_dlabel.json b/derivatives/labels/sub-mniS05/anat/sub-mniS05_T1w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-mniS05/anat/sub-mniS05_space-other_T1w_label-discs_dlabel.json rename to derivatives/labels/sub-mniS05/anat/sub-mniS05_T1w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-mniS05/anat/sub-mniS05_space-other_T1w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-mniS05/anat/sub-mniS05_T1w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-mniS05/anat/sub-mniS05_space-other_T1w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-mniS05/anat/sub-mniS05_T1w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-mniS05/anat/sub-mniS05_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-mniS05/anat/sub-mniS05_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-mniS05/anat/sub-mniS05_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-mniS05/anat/sub-mniS05_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-mniS05/anat/sub-mniS05_T2star_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-mniS05/anat/sub-mniS05_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-mniS05/anat/sub-mniS05_T2star_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-mniS05/anat/sub-mniS05_space-other_T2w_label-discs_dlabel.json b/derivatives/labels/sub-mniS05/anat/sub-mniS05_T2w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-mniS05/anat/sub-mniS05_space-other_T2w_label-discs_dlabel.json rename to derivatives/labels/sub-mniS05/anat/sub-mniS05_T2w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-mniS05/anat/sub-mniS05_space-other_T2w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-mniS05/anat/sub-mniS05_T2w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-mniS05/anat/sub-mniS05_space-other_T2w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-mniS05/anat/sub-mniS05_T2w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-mniS05/anat/sub-mniS05_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-mniS05/anat/sub-mniS05_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-mniS05/anat/sub-mniS05_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-mniS05/anat/sub-mniS05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-mniS05/anat/sub-mniS05_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-mniS05/anat/sub-mniS05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-mniS05/anat/sub-mniS05_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-mniS05/anat/sub-mniS05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-mniS05/anat/sub-mniS05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-mniS05/anat/sub-mniS05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-mniS05/anat/sub-mniS05_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-mniS05/anat/sub-mniS05_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-mniS05/anat/sub-mniS05_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-mniS05/anat/sub-mniS05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-mniS05/anat/sub-mniS05_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-mniS05/anat/sub-mniS05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-mniS05/anat/sub-mniS05_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-mniS05/anat/sub-mniS05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-mniS05/anat/sub-mniS05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-mniS05/anat/sub-mniS05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-mniS05/anat/sub-mniS05_space-other_T2star_gmlabel-SC_seg.nii.gz b/derivatives/labels/sub-mniS05/anat/sub-mniS05_space-other_T2star_gmlabel-SC_seg.nii.gz index 1d4a734524..2efaff4fbb 100644 --- a/derivatives/labels/sub-mniS05/anat/sub-mniS05_space-other_T2star_gmlabel-SC_seg.nii.gz +++ b/derivatives/labels/sub-mniS05/anat/sub-mniS05_space-other_T2star_gmlabel-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s106804--89f8cb2152dcde677a9e3e705d5985fd32b76ffb1814473feaad8f24410c6bc7.nii.gz +/annex/objects/SHA256E-s106817--0c1e717df16d006467ee5ad47cd5008840252df44ead5fea6f19438213dd47e2.nii.gz diff --git a/derivatives/labels/sub-mniS05/anat/sub-mniS05_space-other_T2star_label-SC_seg.nii.gz b/derivatives/labels/sub-mniS05/anat/sub-mniS05_space-other_T2star_label-SC_seg.nii.gz index 6fa57a9ff0..41c606c6c4 100644 --- a/derivatives/labels/sub-mniS05/anat/sub-mniS05_space-other_T2star_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-mniS05/anat/sub-mniS05_space-other_T2star_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s6728--2bb3531209ebc19e9a696475344fb76fae6504e895b9075b2e166d589f003a9a.nii.gz +/annex/objects/SHA256E-s28066--8ff6ef5b9f79a3a652203dc115c939f70a2a52e5ef34f8043fba5524891d449d.nii.gz diff --git a/derivatives/labels/sub-mniS05/anat/sub-mniS05_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-mniS05/anat/sub-mniS05_space-other_T2star_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-mniS05/anat/sub-mniS05_space-other_T2star_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-mniS06/anat/sub-mniS06_space-other_T1w_label-discs_dlabel.json b/derivatives/labels/sub-mniS06/anat/sub-mniS06_T1w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-mniS06/anat/sub-mniS06_space-other_T1w_label-discs_dlabel.json rename to derivatives/labels/sub-mniS06/anat/sub-mniS06_T1w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-mniS06/anat/sub-mniS06_space-other_T1w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-mniS06/anat/sub-mniS06_T1w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-mniS06/anat/sub-mniS06_space-other_T1w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-mniS06/anat/sub-mniS06_T1w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-mniS06/anat/sub-mniS06_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-mniS06/anat/sub-mniS06_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-mniS06/anat/sub-mniS06_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-mniS06/anat/sub-mniS06_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-mniS06/anat/sub-mniS06_T2star_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-mniS06/anat/sub-mniS06_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-mniS06/anat/sub-mniS06_T2star_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-mniS06/anat/sub-mniS06_space-other_T2w_label-discs_dlabel.json b/derivatives/labels/sub-mniS06/anat/sub-mniS06_T2w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-mniS06/anat/sub-mniS06_space-other_T2w_label-discs_dlabel.json rename to derivatives/labels/sub-mniS06/anat/sub-mniS06_T2w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-mniS06/anat/sub-mniS06_space-other_T2w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-mniS06/anat/sub-mniS06_T2w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-mniS06/anat/sub-mniS06_space-other_T2w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-mniS06/anat/sub-mniS06_T2w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-mniS06/anat/sub-mniS06_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-mniS06/anat/sub-mniS06_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-mniS06/anat/sub-mniS06_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-mniS06/anat/sub-mniS06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-mniS06/anat/sub-mniS06_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-mniS06/anat/sub-mniS06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-mniS06/anat/sub-mniS06_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-mniS06/anat/sub-mniS06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-mniS06/anat/sub-mniS06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-mniS06/anat/sub-mniS06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-mniS06/anat/sub-mniS06_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-mniS06/anat/sub-mniS06_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-mniS06/anat/sub-mniS06_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-mniS06/anat/sub-mniS06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-mniS06/anat/sub-mniS06_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-mniS06/anat/sub-mniS06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-mniS06/anat/sub-mniS06_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-mniS06/anat/sub-mniS06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-mniS06/anat/sub-mniS06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-mniS06/anat/sub-mniS06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-mniS06/anat/sub-mniS06_space-other_T2star_label-SC_seg.nii.gz b/derivatives/labels/sub-mniS06/anat/sub-mniS06_space-other_T2star_label-SC_seg.nii.gz index 7abcc65de9..eb2a527f15 100644 --- a/derivatives/labels/sub-mniS06/anat/sub-mniS06_space-other_T2star_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-mniS06/anat/sub-mniS06_space-other_T2star_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s14939--bb82b35235f9a52e3af0a7ba30474d4efc697662dfdf300a72add0f96f2ed390.nii.gz +/annex/objects/SHA256E-s14960--8fbe3a47439df9cf14c0b023bdcb9b02cd54733e7091aef6f1e8e834d8c701a5.nii.gz diff --git a/derivatives/labels/sub-mniS06/anat/sub-mniS06_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-mniS06/anat/sub-mniS06_space-other_T2star_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-mniS06/anat/sub-mniS06_space-other_T2star_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-mniS07/anat/sub-mniS07_space-other_T1w_label-discs_dlabel.json b/derivatives/labels/sub-mniS07/anat/sub-mniS07_T1w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-mniS07/anat/sub-mniS07_space-other_T1w_label-discs_dlabel.json rename to derivatives/labels/sub-mniS07/anat/sub-mniS07_T1w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-mniS07/anat/sub-mniS07_space-other_T1w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-mniS07/anat/sub-mniS07_T1w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-mniS07/anat/sub-mniS07_space-other_T1w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-mniS07/anat/sub-mniS07_T1w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-mniS07/anat/sub-mniS07_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-mniS07/anat/sub-mniS07_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-mniS07/anat/sub-mniS07_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-mniS07/anat/sub-mniS07_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-mniS07/anat/sub-mniS07_T2star_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-mniS07/anat/sub-mniS07_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-mniS07/anat/sub-mniS07_T2star_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-mniS07/anat/sub-mniS07_space-other_T2w_label-discs_dlabel.json b/derivatives/labels/sub-mniS07/anat/sub-mniS07_T2w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-mniS07/anat/sub-mniS07_space-other_T2w_label-discs_dlabel.json rename to derivatives/labels/sub-mniS07/anat/sub-mniS07_T2w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-mniS07/anat/sub-mniS07_space-other_T2w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-mniS07/anat/sub-mniS07_T2w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-mniS07/anat/sub-mniS07_space-other_T2w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-mniS07/anat/sub-mniS07_T2w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-mniS07/anat/sub-mniS07_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-mniS07/anat/sub-mniS07_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-mniS07/anat/sub-mniS07_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-mniS07/anat/sub-mniS07_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-mniS07/anat/sub-mniS07_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-mniS07/anat/sub-mniS07_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-mniS07/anat/sub-mniS07_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-mniS07/anat/sub-mniS07_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-mniS07/anat/sub-mniS07_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-mniS07/anat/sub-mniS07_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-mniS07/anat/sub-mniS07_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-mniS07/anat/sub-mniS07_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-mniS07/anat/sub-mniS07_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-mniS07/anat/sub-mniS07_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-mniS07/anat/sub-mniS07_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-mniS07/anat/sub-mniS07_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-mniS07/anat/sub-mniS07_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-mniS07/anat/sub-mniS07_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-mniS07/anat/sub-mniS07_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-mniS07/anat/sub-mniS07_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-mniS07/anat/sub-mniS07_space-other_T2star_label-SC_seg.nii.gz b/derivatives/labels/sub-mniS07/anat/sub-mniS07_space-other_T2star_label-SC_seg.nii.gz index 867f301098..8322316099 100644 --- a/derivatives/labels/sub-mniS07/anat/sub-mniS07_space-other_T2star_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-mniS07/anat/sub-mniS07_space-other_T2star_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s14923--220a8f2f6046f8394463a29a08d1e3a40a0f97463766570a280a295f30ef8228.nii.gz +/annex/objects/SHA256E-s14944--b89e42fc510e23256b7c531bd1de8b3101e31de4320ffe67da6c1501e6146412.nii.gz diff --git a/derivatives/labels/sub-mniS07/anat/sub-mniS07_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-mniS07/anat/sub-mniS07_space-other_T2star_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-mniS07/anat/sub-mniS07_space-other_T2star_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-mniS08/anat/sub-mniS08_space-other_T1w_label-discs_dlabel.json b/derivatives/labels/sub-mniS08/anat/sub-mniS08_T1w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-mniS08/anat/sub-mniS08_space-other_T1w_label-discs_dlabel.json rename to derivatives/labels/sub-mniS08/anat/sub-mniS08_T1w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-mniS08/anat/sub-mniS08_space-other_T1w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-mniS08/anat/sub-mniS08_T1w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-mniS08/anat/sub-mniS08_space-other_T1w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-mniS08/anat/sub-mniS08_T1w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-mniS08/anat/sub-mniS08_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-mniS08/anat/sub-mniS08_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-mniS08/anat/sub-mniS08_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-mniS08/anat/sub-mniS08_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-mniS08/anat/sub-mniS08_T2star_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-mniS08/anat/sub-mniS08_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-mniS08/anat/sub-mniS08_T2star_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-mniS08/anat/sub-mniS08_space-other_T2w_label-discs_dlabel.json b/derivatives/labels/sub-mniS08/anat/sub-mniS08_T2w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-mniS08/anat/sub-mniS08_space-other_T2w_label-discs_dlabel.json rename to derivatives/labels/sub-mniS08/anat/sub-mniS08_T2w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-mniS08/anat/sub-mniS08_space-other_T2w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-mniS08/anat/sub-mniS08_T2w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-mniS08/anat/sub-mniS08_space-other_T2w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-mniS08/anat/sub-mniS08_T2w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-mniS08/anat/sub-mniS08_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-mniS08/anat/sub-mniS08_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-mniS08/anat/sub-mniS08_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-mniS08/anat/sub-mniS08_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-mniS08/anat/sub-mniS08_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-mniS08/anat/sub-mniS08_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-mniS08/anat/sub-mniS08_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-mniS08/anat/sub-mniS08_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-mniS08/anat/sub-mniS08_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-mniS08/anat/sub-mniS08_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-mniS08/anat/sub-mniS08_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-mniS08/anat/sub-mniS08_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-mniS08/anat/sub-mniS08_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-mniS08/anat/sub-mniS08_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-mniS08/anat/sub-mniS08_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-mniS08/anat/sub-mniS08_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-mniS08/anat/sub-mniS08_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-mniS08/anat/sub-mniS08_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-mniS08/anat/sub-mniS08_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-mniS08/anat/sub-mniS08_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-mniS08/anat/sub-mniS08_space-other_T2star_label-SC_seg.nii.gz b/derivatives/labels/sub-mniS08/anat/sub-mniS08_space-other_T2star_label-SC_seg.nii.gz index 500a639302..dbb5e3115e 100644 --- a/derivatives/labels/sub-mniS08/anat/sub-mniS08_space-other_T2star_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-mniS08/anat/sub-mniS08_space-other_T2star_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s14890--5a7f7ca975c727fd72cac5f8cda18cb3b5180e38bb012bb32894eb41e2164216.nii.gz +/annex/objects/SHA256E-s14911--fae14b69f71474201f030c11d701a7b8c9ba23bd2bfb69a4f74d9f0c4cdd06e4.nii.gz diff --git a/derivatives/labels/sub-mniS08/anat/sub-mniS08_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-mniS08/anat/sub-mniS08_space-other_T2star_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-mniS08/anat/sub-mniS08_space-other_T2star_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-mniS09/anat/sub-mniS09_space-other_T1w_label-discs_dlabel.json b/derivatives/labels/sub-mniS09/anat/sub-mniS09_T1w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-mniS09/anat/sub-mniS09_space-other_T1w_label-discs_dlabel.json rename to derivatives/labels/sub-mniS09/anat/sub-mniS09_T1w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-mniS09/anat/sub-mniS09_space-other_T1w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-mniS09/anat/sub-mniS09_T1w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-mniS09/anat/sub-mniS09_space-other_T1w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-mniS09/anat/sub-mniS09_T1w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-mniS09/anat/sub-mniS09_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-mniS09/anat/sub-mniS09_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-mniS09/anat/sub-mniS09_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-mniS09/anat/sub-mniS09_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-mniS09/anat/sub-mniS09_T2star_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-mniS09/anat/sub-mniS09_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-mniS09/anat/sub-mniS09_T2star_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-mniS09/anat/sub-mniS09_space-other_T2w_label-discs_dlabel.json b/derivatives/labels/sub-mniS09/anat/sub-mniS09_T2w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-mniS09/anat/sub-mniS09_space-other_T2w_label-discs_dlabel.json rename to derivatives/labels/sub-mniS09/anat/sub-mniS09_T2w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-mniS09/anat/sub-mniS09_space-other_T2w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-mniS09/anat/sub-mniS09_T2w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-mniS09/anat/sub-mniS09_space-other_T2w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-mniS09/anat/sub-mniS09_T2w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-mniS09/anat/sub-mniS09_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-mniS09/anat/sub-mniS09_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-mniS09/anat/sub-mniS09_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-mniS09/anat/sub-mniS09_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-mniS09/anat/sub-mniS09_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-mniS09/anat/sub-mniS09_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-mniS09/anat/sub-mniS09_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-mniS09/anat/sub-mniS09_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-mniS09/anat/sub-mniS09_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-mniS09/anat/sub-mniS09_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-mniS09/anat/sub-mniS09_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-mniS09/anat/sub-mniS09_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-mniS09/anat/sub-mniS09_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-mniS09/anat/sub-mniS09_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-mniS09/anat/sub-mniS09_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-mniS09/anat/sub-mniS09_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-mniS09/anat/sub-mniS09_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-mniS09/anat/sub-mniS09_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-mniS09/anat/sub-mniS09_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-mniS09/anat/sub-mniS09_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-mniS09/anat/sub-mniS09_space-other_T2star_label-SC_seg.nii.gz b/derivatives/labels/sub-mniS09/anat/sub-mniS09_space-other_T2star_label-SC_seg.nii.gz index 79d30d8d8b..bfef302fb4 100644 --- a/derivatives/labels/sub-mniS09/anat/sub-mniS09_space-other_T2star_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-mniS09/anat/sub-mniS09_space-other_T2star_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s14878--587c5f7272e11a605a2f98a31e276d97ce8911f316dcc2aea5650df6bea64482.nii.gz +/annex/objects/SHA256E-s14899--7579cfd3ada800352fcd7a22c79bfd814d76a3d358f4d5f7d7620bd00e3b3a69.nii.gz diff --git a/derivatives/labels/sub-mniS09/anat/sub-mniS09_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-mniS09/anat/sub-mniS09_space-other_T2star_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-mniS09/anat/sub-mniS09_space-other_T2star_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-mountSinai01/anat/sub-mountSinai01_space-other_T1w_label-discs_dlabel.json b/derivatives/labels/sub-mountSinai01/anat/sub-mountSinai01_T1w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-mountSinai01/anat/sub-mountSinai01_space-other_T1w_label-discs_dlabel.json rename to derivatives/labels/sub-mountSinai01/anat/sub-mountSinai01_T1w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-mountSinai01/anat/sub-mountSinai01_space-other_T1w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-mountSinai01/anat/sub-mountSinai01_T1w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-mountSinai01/anat/sub-mountSinai01_space-other_T1w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-mountSinai01/anat/sub-mountSinai01_T1w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-mountSinai01/anat/sub-mountSinai01_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-mountSinai01/anat/sub-mountSinai01_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-mountSinai01/anat/sub-mountSinai01_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-mountSinai01/anat/sub-mountSinai01_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-mountSinai01/anat/sub-mountSinai01_T2star_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-mountSinai01/anat/sub-mountSinai01_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-mountSinai01/anat/sub-mountSinai01_T2star_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-mountSinai01/anat/sub-mountSinai01_space-other_T2w_label-discs_dlabel.json b/derivatives/labels/sub-mountSinai01/anat/sub-mountSinai01_T2w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-mountSinai01/anat/sub-mountSinai01_space-other_T2w_label-discs_dlabel.json rename to derivatives/labels/sub-mountSinai01/anat/sub-mountSinai01_T2w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-mountSinai01/anat/sub-mountSinai01_space-other_T2w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-mountSinai01/anat/sub-mountSinai01_T2w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-mountSinai01/anat/sub-mountSinai01_space-other_T2w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-mountSinai01/anat/sub-mountSinai01_T2w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-mountSinai01/anat/sub-mountSinai01_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-mountSinai01/anat/sub-mountSinai01_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-mountSinai01/anat/sub-mountSinai01_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-mountSinai01/anat/sub-mountSinai01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-mountSinai01/anat/sub-mountSinai01_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-mountSinai01/anat/sub-mountSinai01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-mountSinai01/anat/sub-mountSinai01_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-mountSinai01/anat/sub-mountSinai01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-mountSinai01/anat/sub-mountSinai01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-mountSinai01/anat/sub-mountSinai01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-mountSinai01/anat/sub-mountSinai01_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-mountSinai01/anat/sub-mountSinai01_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-mountSinai01/anat/sub-mountSinai01_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-mountSinai01/anat/sub-mountSinai01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-mountSinai01/anat/sub-mountSinai01_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-mountSinai01/anat/sub-mountSinai01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-mountSinai01/anat/sub-mountSinai01_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-mountSinai01/anat/sub-mountSinai01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-mountSinai01/anat/sub-mountSinai01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-mountSinai01/anat/sub-mountSinai01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-mountSinai01/anat/sub-mountSinai01_space-other_T2star_label-SC_seg.nii.gz b/derivatives/labels/sub-mountSinai01/anat/sub-mountSinai01_space-other_T2star_label-SC_seg.nii.gz index 1dadb0434b..34fe4383f9 100644 --- a/derivatives/labels/sub-mountSinai01/anat/sub-mountSinai01_space-other_T2star_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-mountSinai01/anat/sub-mountSinai01_space-other_T2star_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s14808--24d77821faf9949a53924af61e3d061aadf41ba9737f8a5a5a35adf36065cb05.nii.gz +/annex/objects/SHA256E-s14829--390a1ae2e97d34f193918d59d1c6665fe4cac67655a1802d339e6af63e3a9d88.nii.gz diff --git a/derivatives/labels/sub-mountSinai01/anat/sub-mountSinai01_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-mountSinai01/anat/sub-mountSinai01_space-other_T2star_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-mountSinai01/anat/sub-mountSinai01_space-other_T2star_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-mountSinai02/anat/sub-mountSinai02_space-other_T1w_label-discs_dlabel.json b/derivatives/labels/sub-mountSinai02/anat/sub-mountSinai02_T1w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-mountSinai02/anat/sub-mountSinai02_space-other_T1w_label-discs_dlabel.json rename to derivatives/labels/sub-mountSinai02/anat/sub-mountSinai02_T1w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-mountSinai02/anat/sub-mountSinai02_space-other_T1w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-mountSinai02/anat/sub-mountSinai02_T1w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-mountSinai02/anat/sub-mountSinai02_space-other_T1w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-mountSinai02/anat/sub-mountSinai02_T1w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-mountSinai02/anat/sub-mountSinai02_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-mountSinai02/anat/sub-mountSinai02_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-mountSinai02/anat/sub-mountSinai02_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-mountSinai02/anat/sub-mountSinai02_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-mountSinai02/anat/sub-mountSinai02_T2star_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-mountSinai02/anat/sub-mountSinai02_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-mountSinai02/anat/sub-mountSinai02_T2star_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-mountSinai02/anat/sub-mountSinai02_space-other_T2w_label-discs_dlabel.json b/derivatives/labels/sub-mountSinai02/anat/sub-mountSinai02_T2w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-mountSinai02/anat/sub-mountSinai02_space-other_T2w_label-discs_dlabel.json rename to derivatives/labels/sub-mountSinai02/anat/sub-mountSinai02_T2w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-mountSinai02/anat/sub-mountSinai02_space-other_T2w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-mountSinai02/anat/sub-mountSinai02_T2w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-mountSinai02/anat/sub-mountSinai02_space-other_T2w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-mountSinai02/anat/sub-mountSinai02_T2w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-mountSinai02/anat/sub-mountSinai02_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-mountSinai02/anat/sub-mountSinai02_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-mountSinai02/anat/sub-mountSinai02_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-mountSinai02/anat/sub-mountSinai02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-mountSinai02/anat/sub-mountSinai02_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-mountSinai02/anat/sub-mountSinai02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-mountSinai02/anat/sub-mountSinai02_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-mountSinai02/anat/sub-mountSinai02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-mountSinai02/anat/sub-mountSinai02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-mountSinai02/anat/sub-mountSinai02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-mountSinai02/anat/sub-mountSinai02_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-mountSinai02/anat/sub-mountSinai02_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-mountSinai02/anat/sub-mountSinai02_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-mountSinai02/anat/sub-mountSinai02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-mountSinai02/anat/sub-mountSinai02_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-mountSinai02/anat/sub-mountSinai02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-mountSinai02/anat/sub-mountSinai02_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-mountSinai02/anat/sub-mountSinai02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-mountSinai02/anat/sub-mountSinai02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-mountSinai02/anat/sub-mountSinai02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-mountSinai02/anat/sub-mountSinai02_space-other_T2star_label-SC_seg.nii.gz b/derivatives/labels/sub-mountSinai02/anat/sub-mountSinai02_space-other_T2star_label-SC_seg.nii.gz index ec748929f0..1f835266eb 100644 --- a/derivatives/labels/sub-mountSinai02/anat/sub-mountSinai02_space-other_T2star_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-mountSinai02/anat/sub-mountSinai02_space-other_T2star_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s14841--77356b91275565c60c3fe8736d3c67738b0d8b3a640007d7b49db367298ae475.nii.gz +/annex/objects/SHA256E-s14862--58704eb02741c906e63aebb5f874910cd9823c1571619918b71f59adf3eba283.nii.gz diff --git a/derivatives/labels/sub-mountSinai02/anat/sub-mountSinai02_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-mountSinai02/anat/sub-mountSinai02_space-other_T2star_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-mountSinai02/anat/sub-mountSinai02_space-other_T2star_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-mountSinai03/anat/sub-mountSinai03_space-other_T1w_label-discs_dlabel.json b/derivatives/labels/sub-mountSinai03/anat/sub-mountSinai03_T1w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-mountSinai03/anat/sub-mountSinai03_space-other_T1w_label-discs_dlabel.json rename to derivatives/labels/sub-mountSinai03/anat/sub-mountSinai03_T1w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-mountSinai03/anat/sub-mountSinai03_space-other_T1w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-mountSinai03/anat/sub-mountSinai03_T1w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-mountSinai03/anat/sub-mountSinai03_space-other_T1w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-mountSinai03/anat/sub-mountSinai03_T1w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-mountSinai03/anat/sub-mountSinai03_space-other_T2w_label-discs_dlabel.json b/derivatives/labels/sub-mountSinai03/anat/sub-mountSinai03_T2w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-mountSinai03/anat/sub-mountSinai03_space-other_T2w_label-discs_dlabel.json rename to derivatives/labels/sub-mountSinai03/anat/sub-mountSinai03_T2w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-mountSinai03/anat/sub-mountSinai03_space-other_T2w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-mountSinai03/anat/sub-mountSinai03_T2w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-mountSinai03/anat/sub-mountSinai03_space-other_T2w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-mountSinai03/anat/sub-mountSinai03_T2w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-mountSinai03/anat/sub-mountSinai03_space-other_T2star_label-SC_seg.nii.gz b/derivatives/labels/sub-mountSinai03/anat/sub-mountSinai03_space-other_T2star_label-SC_seg.nii.gz index 4a1c2d9079..0c47fd04cc 100644 --- a/derivatives/labels/sub-mountSinai03/anat/sub-mountSinai03_space-other_T2star_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-mountSinai03/anat/sub-mountSinai03_space-other_T2star_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s14940--0e231e4af87d1bdbf0060090e40f5c167dbf3a78e139e285d58fbb0565143028.nii.gz +/annex/objects/SHA256E-s14961--9305242d959eefeb8693f8752dc38aa1e45f4f9a576763262e5624dfa086a991.nii.gz diff --git a/derivatives/labels/sub-mountSinai04/anat/sub-mountSinai04_space-other_T1w_label-discs_dlabel.json b/derivatives/labels/sub-mountSinai04/anat/sub-mountSinai04_T1w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-mountSinai04/anat/sub-mountSinai04_space-other_T1w_label-discs_dlabel.json rename to derivatives/labels/sub-mountSinai04/anat/sub-mountSinai04_T1w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-mountSinai04/anat/sub-mountSinai04_space-other_T1w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-mountSinai04/anat/sub-mountSinai04_T1w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-mountSinai04/anat/sub-mountSinai04_space-other_T1w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-mountSinai04/anat/sub-mountSinai04_T1w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-mountSinai04/anat/sub-mountSinai04_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-mountSinai04/anat/sub-mountSinai04_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-mountSinai04/anat/sub-mountSinai04_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-mountSinai04/anat/sub-mountSinai04_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-mountSinai04/anat/sub-mountSinai04_T2star_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-mountSinai04/anat/sub-mountSinai04_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-mountSinai04/anat/sub-mountSinai04_T2star_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-mountSinai04/anat/sub-mountSinai04_space-other_T2w_label-discs_dlabel.json b/derivatives/labels/sub-mountSinai04/anat/sub-mountSinai04_T2w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-mountSinai04/anat/sub-mountSinai04_space-other_T2w_label-discs_dlabel.json rename to derivatives/labels/sub-mountSinai04/anat/sub-mountSinai04_T2w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-mountSinai04/anat/sub-mountSinai04_space-other_T2w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-mountSinai04/anat/sub-mountSinai04_T2w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-mountSinai04/anat/sub-mountSinai04_space-other_T2w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-mountSinai04/anat/sub-mountSinai04_T2w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-mountSinai04/anat/sub-mountSinai04_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-mountSinai04/anat/sub-mountSinai04_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-mountSinai04/anat/sub-mountSinai04_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-mountSinai04/anat/sub-mountSinai04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-mountSinai04/anat/sub-mountSinai04_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-mountSinai04/anat/sub-mountSinai04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-mountSinai04/anat/sub-mountSinai04_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-mountSinai04/anat/sub-mountSinai04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-mountSinai04/anat/sub-mountSinai04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-mountSinai04/anat/sub-mountSinai04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-mountSinai04/anat/sub-mountSinai04_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-mountSinai04/anat/sub-mountSinai04_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-mountSinai04/anat/sub-mountSinai04_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-mountSinai04/anat/sub-mountSinai04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-mountSinai04/anat/sub-mountSinai04_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-mountSinai04/anat/sub-mountSinai04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-mountSinai04/anat/sub-mountSinai04_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-mountSinai04/anat/sub-mountSinai04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-mountSinai04/anat/sub-mountSinai04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-mountSinai04/anat/sub-mountSinai04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-mountSinai04/anat/sub-mountSinai04_space-other_T2star_label-SC_seg.nii.gz b/derivatives/labels/sub-mountSinai04/anat/sub-mountSinai04_space-other_T2star_label-SC_seg.nii.gz index dbf2802b21..65faa46eec 100644 --- a/derivatives/labels/sub-mountSinai04/anat/sub-mountSinai04_space-other_T2star_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-mountSinai04/anat/sub-mountSinai04_space-other_T2star_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s14919--855bc167058524cbf647c1a22d613f0c1356d7b1b7a08b81c0cdb52683e1bf57.nii.gz +/annex/objects/SHA256E-s14940--5233ea34ad00d14430cd5aa65b1a62600a123b1ee20d460399ae65e53eb32adf.nii.gz diff --git a/derivatives/labels/sub-mountSinai04/anat/sub-mountSinai04_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-mountSinai04/anat/sub-mountSinai04_space-other_T2star_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-mountSinai04/anat/sub-mountSinai04_space-other_T2star_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-mountSinai05/anat/sub-mountSinai05_space-other_T1w_label-discs_dlabel.json b/derivatives/labels/sub-mountSinai05/anat/sub-mountSinai05_T1w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-mountSinai05/anat/sub-mountSinai05_space-other_T1w_label-discs_dlabel.json rename to derivatives/labels/sub-mountSinai05/anat/sub-mountSinai05_T1w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-mountSinai05/anat/sub-mountSinai05_space-other_T1w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-mountSinai05/anat/sub-mountSinai05_T1w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-mountSinai05/anat/sub-mountSinai05_space-other_T1w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-mountSinai05/anat/sub-mountSinai05_T1w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-mountSinai05/anat/sub-mountSinai05_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-mountSinai05/anat/sub-mountSinai05_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-mountSinai05/anat/sub-mountSinai05_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-mountSinai05/anat/sub-mountSinai05_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-mountSinai05/anat/sub-mountSinai05_T2star_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-mountSinai05/anat/sub-mountSinai05_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-mountSinai05/anat/sub-mountSinai05_T2star_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-mountSinai05/anat/sub-mountSinai05_space-other_T2w_label-discs_dlabel.json b/derivatives/labels/sub-mountSinai05/anat/sub-mountSinai05_T2w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-mountSinai05/anat/sub-mountSinai05_space-other_T2w_label-discs_dlabel.json rename to derivatives/labels/sub-mountSinai05/anat/sub-mountSinai05_T2w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-mountSinai05/anat/sub-mountSinai05_space-other_T2w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-mountSinai05/anat/sub-mountSinai05_T2w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-mountSinai05/anat/sub-mountSinai05_space-other_T2w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-mountSinai05/anat/sub-mountSinai05_T2w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-mountSinai05/anat/sub-mountSinai05_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-mountSinai05/anat/sub-mountSinai05_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-mountSinai05/anat/sub-mountSinai05_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-mountSinai05/anat/sub-mountSinai05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-mountSinai05/anat/sub-mountSinai05_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-mountSinai05/anat/sub-mountSinai05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-mountSinai05/anat/sub-mountSinai05_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-mountSinai05/anat/sub-mountSinai05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-mountSinai05/anat/sub-mountSinai05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-mountSinai05/anat/sub-mountSinai05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-mountSinai05/anat/sub-mountSinai05_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-mountSinai05/anat/sub-mountSinai05_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-mountSinai05/anat/sub-mountSinai05_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-mountSinai05/anat/sub-mountSinai05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-mountSinai05/anat/sub-mountSinai05_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-mountSinai05/anat/sub-mountSinai05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-mountSinai05/anat/sub-mountSinai05_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-mountSinai05/anat/sub-mountSinai05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-mountSinai05/anat/sub-mountSinai05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-mountSinai05/anat/sub-mountSinai05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-mountSinai05/anat/sub-mountSinai05_space-other_T2star_label-SC_seg.nii.gz b/derivatives/labels/sub-mountSinai05/anat/sub-mountSinai05_space-other_T2star_label-SC_seg.nii.gz index 48f73a6944..d236a3d3b8 100644 --- a/derivatives/labels/sub-mountSinai05/anat/sub-mountSinai05_space-other_T2star_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-mountSinai05/anat/sub-mountSinai05_space-other_T2star_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s15018--2f23e4989b47e6287fa15b6d85c6bb4dee17d26f11b526334693bb787a7984c7.nii.gz +/annex/objects/SHA256E-s15039--3edc9316614d836688173ba18de07a3557cd8595372e18de004f14b6ac1c63d8.nii.gz diff --git a/derivatives/labels/sub-mountSinai05/anat/sub-mountSinai05_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-mountSinai05/anat/sub-mountSinai05_space-other_T2star_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-mountSinai05/anat/sub-mountSinai05_space-other_T2star_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-mountSinai06/anat/sub-mountSinai06_space-other_T1w_label-discs_dlabel.json b/derivatives/labels/sub-mountSinai06/anat/sub-mountSinai06_T1w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-mountSinai06/anat/sub-mountSinai06_space-other_T1w_label-discs_dlabel.json rename to derivatives/labels/sub-mountSinai06/anat/sub-mountSinai06_T1w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-mountSinai06/anat/sub-mountSinai06_space-other_T1w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-mountSinai06/anat/sub-mountSinai06_T1w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-mountSinai06/anat/sub-mountSinai06_space-other_T1w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-mountSinai06/anat/sub-mountSinai06_T1w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-mountSinai06/anat/sub-mountSinai06_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-mountSinai06/anat/sub-mountSinai06_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-mountSinai06/anat/sub-mountSinai06_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-mountSinai06/anat/sub-mountSinai06_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-mountSinai06/anat/sub-mountSinai06_T2star_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-mountSinai06/anat/sub-mountSinai06_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-mountSinai06/anat/sub-mountSinai06_T2star_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-mountSinai06/anat/sub-mountSinai06_space-other_T2w_label-discs_dlabel.json b/derivatives/labels/sub-mountSinai06/anat/sub-mountSinai06_T2w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-mountSinai06/anat/sub-mountSinai06_space-other_T2w_label-discs_dlabel.json rename to derivatives/labels/sub-mountSinai06/anat/sub-mountSinai06_T2w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-mountSinai06/anat/sub-mountSinai06_space-other_T2w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-mountSinai06/anat/sub-mountSinai06_T2w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-mountSinai06/anat/sub-mountSinai06_space-other_T2w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-mountSinai06/anat/sub-mountSinai06_T2w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-mountSinai06/anat/sub-mountSinai06_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-mountSinai06/anat/sub-mountSinai06_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-mountSinai06/anat/sub-mountSinai06_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-mountSinai06/anat/sub-mountSinai06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-mountSinai06/anat/sub-mountSinai06_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-mountSinai06/anat/sub-mountSinai06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-mountSinai06/anat/sub-mountSinai06_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-mountSinai06/anat/sub-mountSinai06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-mountSinai06/anat/sub-mountSinai06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-mountSinai06/anat/sub-mountSinai06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-mountSinai06/anat/sub-mountSinai06_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-mountSinai06/anat/sub-mountSinai06_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-mountSinai06/anat/sub-mountSinai06_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-mountSinai06/anat/sub-mountSinai06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-mountSinai06/anat/sub-mountSinai06_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-mountSinai06/anat/sub-mountSinai06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-mountSinai06/anat/sub-mountSinai06_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-mountSinai06/anat/sub-mountSinai06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-mountSinai06/anat/sub-mountSinai06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-mountSinai06/anat/sub-mountSinai06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-mountSinai06/anat/sub-mountSinai06_space-other_T2star_label-SC_seg.nii.gz b/derivatives/labels/sub-mountSinai06/anat/sub-mountSinai06_space-other_T2star_label-SC_seg.nii.gz index 95a5fbffb4..622e35ef3c 100644 --- a/derivatives/labels/sub-mountSinai06/anat/sub-mountSinai06_space-other_T2star_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-mountSinai06/anat/sub-mountSinai06_space-other_T2star_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s14894--d7aab70aa9369c478b84db3cbdfb389ee1a9e5540c31e89feb925b517808db90.nii.gz +/annex/objects/SHA256E-s14915--40cda87792ac46dc126a4d92d6bce57444ac3c2e8458bbf431a4b37ef9cabfcf.nii.gz diff --git a/derivatives/labels/sub-mountSinai06/anat/sub-mountSinai06_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-mountSinai06/anat/sub-mountSinai06_space-other_T2star_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-mountSinai06/anat/sub-mountSinai06_space-other_T2star_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-mpicbs01/anat/sub-mpicbs01_space-other_T1w_label-discs_dlabel.json b/derivatives/labels/sub-mpicbs01/anat/sub-mpicbs01_T1w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-mpicbs01/anat/sub-mpicbs01_space-other_T1w_label-discs_dlabel.json rename to derivatives/labels/sub-mpicbs01/anat/sub-mpicbs01_T1w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-mpicbs01/anat/sub-mpicbs01_space-other_T1w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-mpicbs01/anat/sub-mpicbs01_T1w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-mpicbs01/anat/sub-mpicbs01_space-other_T1w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-mpicbs01/anat/sub-mpicbs01_T1w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-mpicbs01/anat/sub-mpicbs01_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-mpicbs01/anat/sub-mpicbs01_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-mpicbs01/anat/sub-mpicbs01_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-mpicbs01/anat/sub-mpicbs01_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-mpicbs01/anat/sub-mpicbs01_T2star_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-mpicbs01/anat/sub-mpicbs01_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-mpicbs01/anat/sub-mpicbs01_T2star_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-mpicbs01/anat/sub-mpicbs01_space-other_T2w_label-discs_dlabel.json b/derivatives/labels/sub-mpicbs01/anat/sub-mpicbs01_T2w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-mpicbs01/anat/sub-mpicbs01_space-other_T2w_label-discs_dlabel.json rename to derivatives/labels/sub-mpicbs01/anat/sub-mpicbs01_T2w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-mpicbs01/anat/sub-mpicbs01_space-other_T2w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-mpicbs01/anat/sub-mpicbs01_T2w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-mpicbs01/anat/sub-mpicbs01_space-other_T2w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-mpicbs01/anat/sub-mpicbs01_T2w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-mpicbs01/anat/sub-mpicbs01_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-mpicbs01/anat/sub-mpicbs01_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-mpicbs01/anat/sub-mpicbs01_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-mpicbs01/anat/sub-mpicbs01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-mpicbs01/anat/sub-mpicbs01_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-mpicbs01/anat/sub-mpicbs01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-mpicbs01/anat/sub-mpicbs01_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-mpicbs01/anat/sub-mpicbs01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-mpicbs01/anat/sub-mpicbs01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-mpicbs01/anat/sub-mpicbs01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-mpicbs01/anat/sub-mpicbs01_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-mpicbs01/anat/sub-mpicbs01_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-mpicbs01/anat/sub-mpicbs01_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-mpicbs01/anat/sub-mpicbs01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-mpicbs01/anat/sub-mpicbs01_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-mpicbs01/anat/sub-mpicbs01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-mpicbs01/anat/sub-mpicbs01_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-mpicbs01/anat/sub-mpicbs01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-mpicbs01/anat/sub-mpicbs01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-mpicbs01/anat/sub-mpicbs01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-mpicbs01/anat/sub-mpicbs01_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.json b/derivatives/labels/sub-mpicbs01/anat/sub-mpicbs01_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.json new file mode 100644 index 0000000000..e537a137e5 --- /dev/null +++ b/derivatives/labels/sub-mpicbs01/anat/sub-mpicbs01_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.json @@ -0,0 +1,11 @@ +{ + "SpatialReference": { + "Orientation": "RPI", + "Resampling": "1x1x1" + }, + "GeneratedBy": [ + { + "Description": "Manual label of C2 and C5 mid-vertebrae, at the center of the spinal cord." + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-mpicbs01/anat/sub-mpicbs01_space-other_T1w_RPI_r_labels-manual.nii.gz b/derivatives/labels/sub-mpicbs01/anat/sub-mpicbs01_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-mpicbs01/anat/sub-mpicbs01_space-other_T1w_RPI_r_labels-manual.nii.gz rename to derivatives/labels/sub-mpicbs01/anat/sub-mpicbs01_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.nii.gz diff --git a/derivatives/labels/sub-mpicbs01/anat/sub-mpicbs01_space-other_T2star_label-SC_seg.nii.gz b/derivatives/labels/sub-mpicbs01/anat/sub-mpicbs01_space-other_T2star_label-SC_seg.nii.gz index ae460c3d22..cee0fab2c3 100644 --- a/derivatives/labels/sub-mpicbs01/anat/sub-mpicbs01_space-other_T2star_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-mpicbs01/anat/sub-mpicbs01_space-other_T2star_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s14844--c04e066207b68c28d2e07f6353e988993efeed013cedc4b3e912d6f90f462ec5.nii.gz +/annex/objects/SHA256E-s14865--d19d3400a0d8ae3d323a361dd26cbfbe330fcd048afa2586520572872676397f.nii.gz diff --git a/derivatives/labels/sub-mpicbs01/anat/sub-mpicbs01_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-mpicbs01/anat/sub-mpicbs01_space-other_T2star_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-mpicbs01/anat/sub-mpicbs01_space-other_T2star_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-mpicbs02/anat/sub-mpicbs02_space-other_T1w_label-discs_dlabel.json b/derivatives/labels/sub-mpicbs02/anat/sub-mpicbs02_T1w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-mpicbs02/anat/sub-mpicbs02_space-other_T1w_label-discs_dlabel.json rename to derivatives/labels/sub-mpicbs02/anat/sub-mpicbs02_T1w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-mpicbs02/anat/sub-mpicbs02_space-other_T1w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-mpicbs02/anat/sub-mpicbs02_T1w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-mpicbs02/anat/sub-mpicbs02_space-other_T1w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-mpicbs02/anat/sub-mpicbs02_T1w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-mpicbs02/anat/sub-mpicbs02_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-mpicbs02/anat/sub-mpicbs02_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-mpicbs02/anat/sub-mpicbs02_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-mpicbs02/anat/sub-mpicbs02_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-mpicbs02/anat/sub-mpicbs02_T2star_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-mpicbs02/anat/sub-mpicbs02_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-mpicbs02/anat/sub-mpicbs02_T2star_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-mpicbs02/anat/sub-mpicbs02_space-other_T2w_label-discs_dlabel.json b/derivatives/labels/sub-mpicbs02/anat/sub-mpicbs02_T2w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-mpicbs02/anat/sub-mpicbs02_space-other_T2w_label-discs_dlabel.json rename to derivatives/labels/sub-mpicbs02/anat/sub-mpicbs02_T2w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-mpicbs02/anat/sub-mpicbs02_space-other_T2w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-mpicbs02/anat/sub-mpicbs02_T2w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-mpicbs02/anat/sub-mpicbs02_space-other_T2w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-mpicbs02/anat/sub-mpicbs02_T2w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-mpicbs02/anat/sub-mpicbs02_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-mpicbs02/anat/sub-mpicbs02_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-mpicbs02/anat/sub-mpicbs02_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-mpicbs02/anat/sub-mpicbs02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-mpicbs02/anat/sub-mpicbs02_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-mpicbs02/anat/sub-mpicbs02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-mpicbs02/anat/sub-mpicbs02_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-mpicbs02/anat/sub-mpicbs02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-mpicbs02/anat/sub-mpicbs02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-mpicbs02/anat/sub-mpicbs02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-mpicbs02/anat/sub-mpicbs02_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-mpicbs02/anat/sub-mpicbs02_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-mpicbs02/anat/sub-mpicbs02_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-mpicbs02/anat/sub-mpicbs02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-mpicbs02/anat/sub-mpicbs02_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-mpicbs02/anat/sub-mpicbs02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-mpicbs02/anat/sub-mpicbs02_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-mpicbs02/anat/sub-mpicbs02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-mpicbs02/anat/sub-mpicbs02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-mpicbs02/anat/sub-mpicbs02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-mpicbs02/anat/sub-mpicbs02_space-other_T2star_label-SC_seg.nii.gz b/derivatives/labels/sub-mpicbs02/anat/sub-mpicbs02_space-other_T2star_label-SC_seg.nii.gz index 052ae947da..67e412dc79 100644 --- a/derivatives/labels/sub-mpicbs02/anat/sub-mpicbs02_space-other_T2star_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-mpicbs02/anat/sub-mpicbs02_space-other_T2star_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s14777--bd4b5324fe060f0ba667df4d151ff39e5cdea2ea9bef7b8764820f0782571b01.nii.gz +/annex/objects/SHA256E-s14798--1a99010649fdeee94db169c83e843fda255d81ff19ea2cbaf4a7f5c57c19e556.nii.gz diff --git a/derivatives/labels/sub-mpicbs02/anat/sub-mpicbs02_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-mpicbs02/anat/sub-mpicbs02_space-other_T2star_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-mpicbs02/anat/sub-mpicbs02_space-other_T2star_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-mpicbs03/anat/sub-mpicbs03_space-other_T1w_label-discs_dlabel.json b/derivatives/labels/sub-mpicbs03/anat/sub-mpicbs03_T1w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-mpicbs03/anat/sub-mpicbs03_space-other_T1w_label-discs_dlabel.json rename to derivatives/labels/sub-mpicbs03/anat/sub-mpicbs03_T1w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-mpicbs03/anat/sub-mpicbs03_space-other_T1w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-mpicbs03/anat/sub-mpicbs03_T1w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-mpicbs03/anat/sub-mpicbs03_space-other_T1w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-mpicbs03/anat/sub-mpicbs03_T1w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-mpicbs03/anat/sub-mpicbs03_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-mpicbs03/anat/sub-mpicbs03_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-mpicbs03/anat/sub-mpicbs03_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-mpicbs03/anat/sub-mpicbs03_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-mpicbs03/anat/sub-mpicbs03_T2star_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-mpicbs03/anat/sub-mpicbs03_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-mpicbs03/anat/sub-mpicbs03_T2star_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-mpicbs03/anat/sub-mpicbs03_space-other_T2w_label-discs_dlabel.json b/derivatives/labels/sub-mpicbs03/anat/sub-mpicbs03_T2w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-mpicbs03/anat/sub-mpicbs03_space-other_T2w_label-discs_dlabel.json rename to derivatives/labels/sub-mpicbs03/anat/sub-mpicbs03_T2w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-mpicbs03/anat/sub-mpicbs03_space-other_T2w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-mpicbs03/anat/sub-mpicbs03_T2w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-mpicbs03/anat/sub-mpicbs03_space-other_T2w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-mpicbs03/anat/sub-mpicbs03_T2w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-mpicbs03/anat/sub-mpicbs03_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-mpicbs03/anat/sub-mpicbs03_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-mpicbs03/anat/sub-mpicbs03_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-mpicbs03/anat/sub-mpicbs03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-mpicbs03/anat/sub-mpicbs03_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-mpicbs03/anat/sub-mpicbs03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-mpicbs03/anat/sub-mpicbs03_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-mpicbs03/anat/sub-mpicbs03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-mpicbs03/anat/sub-mpicbs03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-mpicbs03/anat/sub-mpicbs03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-mpicbs03/anat/sub-mpicbs03_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-mpicbs03/anat/sub-mpicbs03_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-mpicbs03/anat/sub-mpicbs03_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-mpicbs03/anat/sub-mpicbs03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-mpicbs03/anat/sub-mpicbs03_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-mpicbs03/anat/sub-mpicbs03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-mpicbs03/anat/sub-mpicbs03_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-mpicbs03/anat/sub-mpicbs03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-mpicbs03/anat/sub-mpicbs03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-mpicbs03/anat/sub-mpicbs03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-mpicbs03/anat/sub-mpicbs03_space-other_T2star_label-SC_seg.nii.gz b/derivatives/labels/sub-mpicbs03/anat/sub-mpicbs03_space-other_T2star_label-SC_seg.nii.gz index 2f7aa44273..5e0332378c 100644 --- a/derivatives/labels/sub-mpicbs03/anat/sub-mpicbs03_space-other_T2star_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-mpicbs03/anat/sub-mpicbs03_space-other_T2star_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s15110--dc868db3a68be89e6bac87e339453accbd23672fcab2f79f2c78f15190ab9c15.nii.gz +/annex/objects/SHA256E-s15131--8bd06781201118ddabf03d9edead54d0d240411ee05e1982be371ec98bb66f1d.nii.gz diff --git a/derivatives/labels/sub-mpicbs03/anat/sub-mpicbs03_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-mpicbs03/anat/sub-mpicbs03_space-other_T2star_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-mpicbs03/anat/sub-mpicbs03_space-other_T2star_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-mpicbs05/anat/sub-mpicbs05_space-other_T1w_label-discs_dlabel.json b/derivatives/labels/sub-mpicbs05/anat/sub-mpicbs05_T1w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-mpicbs05/anat/sub-mpicbs05_space-other_T1w_label-discs_dlabel.json rename to derivatives/labels/sub-mpicbs05/anat/sub-mpicbs05_T1w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-mpicbs05/anat/sub-mpicbs05_space-other_T1w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-mpicbs05/anat/sub-mpicbs05_T1w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-mpicbs05/anat/sub-mpicbs05_space-other_T1w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-mpicbs05/anat/sub-mpicbs05_T1w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-mpicbs05/anat/sub-mpicbs05_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-mpicbs05/anat/sub-mpicbs05_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-mpicbs05/anat/sub-mpicbs05_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-mpicbs05/anat/sub-mpicbs05_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-mpicbs05/anat/sub-mpicbs05_T2star_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-mpicbs05/anat/sub-mpicbs05_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-mpicbs05/anat/sub-mpicbs05_T2star_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-mpicbs05/anat/sub-mpicbs05_space-other_T2w_label-discs_dlabel.json b/derivatives/labels/sub-mpicbs05/anat/sub-mpicbs05_T2w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-mpicbs05/anat/sub-mpicbs05_space-other_T2w_label-discs_dlabel.json rename to derivatives/labels/sub-mpicbs05/anat/sub-mpicbs05_T2w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-mpicbs05/anat/sub-mpicbs05_space-other_T2w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-mpicbs05/anat/sub-mpicbs05_T2w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-mpicbs05/anat/sub-mpicbs05_space-other_T2w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-mpicbs05/anat/sub-mpicbs05_T2w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-mpicbs05/anat/sub-mpicbs05_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-mpicbs05/anat/sub-mpicbs05_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-mpicbs05/anat/sub-mpicbs05_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-mpicbs05/anat/sub-mpicbs05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-mpicbs05/anat/sub-mpicbs05_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-mpicbs05/anat/sub-mpicbs05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-mpicbs05/anat/sub-mpicbs05_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-mpicbs05/anat/sub-mpicbs05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-mpicbs05/anat/sub-mpicbs05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-mpicbs05/anat/sub-mpicbs05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-mpicbs05/anat/sub-mpicbs05_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-mpicbs05/anat/sub-mpicbs05_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-mpicbs05/anat/sub-mpicbs05_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-mpicbs05/anat/sub-mpicbs05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-mpicbs05/anat/sub-mpicbs05_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-mpicbs05/anat/sub-mpicbs05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-mpicbs05/anat/sub-mpicbs05_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-mpicbs05/anat/sub-mpicbs05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-mpicbs05/anat/sub-mpicbs05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-mpicbs05/anat/sub-mpicbs05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-mpicbs05/anat/sub-mpicbs05_space-other_T2star_label-SC_seg.nii.gz b/derivatives/labels/sub-mpicbs05/anat/sub-mpicbs05_space-other_T2star_label-SC_seg.nii.gz index 84ed6a716a..ee734af4a1 100644 --- a/derivatives/labels/sub-mpicbs05/anat/sub-mpicbs05_space-other_T2star_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-mpicbs05/anat/sub-mpicbs05_space-other_T2star_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s14768--7afafdfe035c140f9b1acec0d89fa05a9d7f8e6ca045a2d7c22637db1c28b9d6.nii.gz +/annex/objects/SHA256E-s14789--706f53f1ffdc86ab0ece2d669f8f39b533b1945c96ed347a0844f57e14f2718f.nii.gz diff --git a/derivatives/labels/sub-mpicbs05/anat/sub-mpicbs05_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-mpicbs05/anat/sub-mpicbs05_space-other_T2star_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-mpicbs05/anat/sub-mpicbs05_space-other_T2star_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-mpicbs06/anat/sub-mpicbs06_space-other_T1w_label-discs_dlabel.json b/derivatives/labels/sub-mpicbs06/anat/sub-mpicbs06_T1w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-mpicbs06/anat/sub-mpicbs06_space-other_T1w_label-discs_dlabel.json rename to derivatives/labels/sub-mpicbs06/anat/sub-mpicbs06_T1w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-mpicbs06/anat/sub-mpicbs06_space-other_T1w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-mpicbs06/anat/sub-mpicbs06_T1w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-mpicbs06/anat/sub-mpicbs06_space-other_T1w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-mpicbs06/anat/sub-mpicbs06_T1w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-mpicbs06/anat/sub-mpicbs06_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-mpicbs06/anat/sub-mpicbs06_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-mpicbs06/anat/sub-mpicbs06_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-mpicbs06/anat/sub-mpicbs06_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-mpicbs06/anat/sub-mpicbs06_T2star_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-mpicbs06/anat/sub-mpicbs06_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-mpicbs06/anat/sub-mpicbs06_T2star_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-mpicbs06/anat/sub-mpicbs06_space-other_T2w_label-discs_dlabel.json b/derivatives/labels/sub-mpicbs06/anat/sub-mpicbs06_T2w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-mpicbs06/anat/sub-mpicbs06_space-other_T2w_label-discs_dlabel.json rename to derivatives/labels/sub-mpicbs06/anat/sub-mpicbs06_T2w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-mpicbs06/anat/sub-mpicbs06_space-other_T2w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-mpicbs06/anat/sub-mpicbs06_T2w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-mpicbs06/anat/sub-mpicbs06_space-other_T2w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-mpicbs06/anat/sub-mpicbs06_T2w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-mpicbs06/anat/sub-mpicbs06_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-mpicbs06/anat/sub-mpicbs06_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-mpicbs06/anat/sub-mpicbs06_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-mpicbs06/anat/sub-mpicbs06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-mpicbs06/anat/sub-mpicbs06_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-mpicbs06/anat/sub-mpicbs06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-mpicbs06/anat/sub-mpicbs06_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-mpicbs06/anat/sub-mpicbs06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-mpicbs06/anat/sub-mpicbs06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-mpicbs06/anat/sub-mpicbs06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-mpicbs06/anat/sub-mpicbs06_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-mpicbs06/anat/sub-mpicbs06_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-mpicbs06/anat/sub-mpicbs06_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-mpicbs06/anat/sub-mpicbs06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-mpicbs06/anat/sub-mpicbs06_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-mpicbs06/anat/sub-mpicbs06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-mpicbs06/anat/sub-mpicbs06_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-mpicbs06/anat/sub-mpicbs06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-mpicbs06/anat/sub-mpicbs06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-mpicbs06/anat/sub-mpicbs06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-mpicbs06/anat/sub-mpicbs06_space-other_T2star_label-SC_seg.nii.gz b/derivatives/labels/sub-mpicbs06/anat/sub-mpicbs06_space-other_T2star_label-SC_seg.nii.gz index b21971aa02..92739d4faa 100644 --- a/derivatives/labels/sub-mpicbs06/anat/sub-mpicbs06_space-other_T2star_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-mpicbs06/anat/sub-mpicbs06_space-other_T2star_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s6813--a5a2e9fbd12fa2c72a9335a3fcf0fb41267b40a111d8216dc3050a9fda3ece33.nii.gz +/annex/objects/SHA256E-s28371--77227ca0745c4b475a56db193f924b68e38c68c497ac29ad703e656ce2a52886.nii.gz diff --git a/derivatives/labels/sub-mpicbs06/anat/sub-mpicbs06_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-mpicbs06/anat/sub-mpicbs06_space-other_T2star_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-mpicbs06/anat/sub-mpicbs06_space-other_T2star_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-mpicbs07/anat/sub-mpicbs07_space-other_T1w_label-discs_dlabel.json b/derivatives/labels/sub-mpicbs07/anat/sub-mpicbs07_T1w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-mpicbs07/anat/sub-mpicbs07_space-other_T1w_label-discs_dlabel.json rename to derivatives/labels/sub-mpicbs07/anat/sub-mpicbs07_T1w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-mpicbs07/anat/sub-mpicbs07_space-other_T1w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-mpicbs07/anat/sub-mpicbs07_T1w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-mpicbs07/anat/sub-mpicbs07_space-other_T1w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-mpicbs07/anat/sub-mpicbs07_T1w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-mpicbs07/anat/sub-mpicbs07_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-mpicbs07/anat/sub-mpicbs07_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-mpicbs07/anat/sub-mpicbs07_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-mpicbs07/anat/sub-mpicbs07_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-mpicbs07/anat/sub-mpicbs07_T2star_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-mpicbs07/anat/sub-mpicbs07_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-mpicbs07/anat/sub-mpicbs07_T2star_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-mpicbs07/anat/sub-mpicbs07_space-other_T2w_label-discs_dlabel.json b/derivatives/labels/sub-mpicbs07/anat/sub-mpicbs07_T2w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-mpicbs07/anat/sub-mpicbs07_space-other_T2w_label-discs_dlabel.json rename to derivatives/labels/sub-mpicbs07/anat/sub-mpicbs07_T2w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-mpicbs07/anat/sub-mpicbs07_space-other_T2w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-mpicbs07/anat/sub-mpicbs07_T2w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-mpicbs07/anat/sub-mpicbs07_space-other_T2w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-mpicbs07/anat/sub-mpicbs07_T2w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-mpicbs07/anat/sub-mpicbs07_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-mpicbs07/anat/sub-mpicbs07_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-mpicbs07/anat/sub-mpicbs07_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-mpicbs07/anat/sub-mpicbs07_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-mpicbs07/anat/sub-mpicbs07_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-mpicbs07/anat/sub-mpicbs07_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-mpicbs07/anat/sub-mpicbs07_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-mpicbs07/anat/sub-mpicbs07_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-mpicbs07/anat/sub-mpicbs07_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-mpicbs07/anat/sub-mpicbs07_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-mpicbs07/anat/sub-mpicbs07_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-mpicbs07/anat/sub-mpicbs07_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-mpicbs07/anat/sub-mpicbs07_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-mpicbs07/anat/sub-mpicbs07_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-mpicbs07/anat/sub-mpicbs07_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-mpicbs07/anat/sub-mpicbs07_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-mpicbs07/anat/sub-mpicbs07_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-mpicbs07/anat/sub-mpicbs07_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-mpicbs07/anat/sub-mpicbs07_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-mpicbs07/anat/sub-mpicbs07_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-mpicbs07/anat/sub-mpicbs07_space-other_T2star_label-SC_seg.nii.gz b/derivatives/labels/sub-mpicbs07/anat/sub-mpicbs07_space-other_T2star_label-SC_seg.nii.gz index ee9e5ec102..c0eb34cedf 100644 --- a/derivatives/labels/sub-mpicbs07/anat/sub-mpicbs07_space-other_T2star_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-mpicbs07/anat/sub-mpicbs07_space-other_T2star_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s15051--7e3b028009ee5d321b64f7a4f976998afaa10d0f248abd18bcc51bc0e7e3344a.nii.gz +/annex/objects/SHA256E-s15072--f9af0092e06b6ebe27ca8cd1679e27b0d866e0d94f8498948b12e973cbeba5b9.nii.gz diff --git a/derivatives/labels/sub-mpicbs07/anat/sub-mpicbs07_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-mpicbs07/anat/sub-mpicbs07_space-other_T2star_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-mpicbs07/anat/sub-mpicbs07_space-other_T2star_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-nottwil01/anat/sub-nottwil01_space-other_T1w_label-discs_dlabel.json b/derivatives/labels/sub-nottwil01/anat/sub-nottwil01_T1w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-nottwil01/anat/sub-nottwil01_space-other_T1w_label-discs_dlabel.json rename to derivatives/labels/sub-nottwil01/anat/sub-nottwil01_T1w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-nottwil01/anat/sub-nottwil01_space-other_T1w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-nottwil01/anat/sub-nottwil01_T1w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-nottwil01/anat/sub-nottwil01_space-other_T1w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-nottwil01/anat/sub-nottwil01_T1w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-nottwil01/anat/sub-nottwil01_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-nottwil01/anat/sub-nottwil01_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-nottwil01/anat/sub-nottwil01_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-nottwil01/anat/sub-nottwil01_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-nottwil01/anat/sub-nottwil01_T2star_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-nottwil01/anat/sub-nottwil01_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-nottwil01/anat/sub-nottwil01_T2star_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-nottwil01/anat/sub-nottwil01_space-other_T2w_label-discs_dlabel.json b/derivatives/labels/sub-nottwil01/anat/sub-nottwil01_T2w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-nottwil01/anat/sub-nottwil01_space-other_T2w_label-discs_dlabel.json rename to derivatives/labels/sub-nottwil01/anat/sub-nottwil01_T2w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-nottwil01/anat/sub-nottwil01_space-other_T2w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-nottwil01/anat/sub-nottwil01_T2w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-nottwil01/anat/sub-nottwil01_space-other_T2w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-nottwil01/anat/sub-nottwil01_T2w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-nottwil01/anat/sub-nottwil01_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-nottwil01/anat/sub-nottwil01_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-nottwil01/anat/sub-nottwil01_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-nottwil01/anat/sub-nottwil01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-nottwil01/anat/sub-nottwil01_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-nottwil01/anat/sub-nottwil01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-nottwil01/anat/sub-nottwil01_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-nottwil01/anat/sub-nottwil01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-nottwil01/anat/sub-nottwil01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-nottwil01/anat/sub-nottwil01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-nottwil01/anat/sub-nottwil01_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-nottwil01/anat/sub-nottwil01_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-nottwil01/anat/sub-nottwil01_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-nottwil01/anat/sub-nottwil01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-nottwil01/anat/sub-nottwil01_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-nottwil01/anat/sub-nottwil01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-nottwil01/anat/sub-nottwil01_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-nottwil01/anat/sub-nottwil01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-nottwil01/anat/sub-nottwil01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-nottwil01/anat/sub-nottwil01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-nottwil01/anat/sub-nottwil01_space-other_T2star_gmlabel-SC_seg.nii.gz b/derivatives/labels/sub-nottwil01/anat/sub-nottwil01_space-other_T2star_gmlabel-SC_seg.nii.gz index 3314ab5a39..9d1b24608c 100644 --- a/derivatives/labels/sub-nottwil01/anat/sub-nottwil01_space-other_T2star_gmlabel-SC_seg.nii.gz +++ b/derivatives/labels/sub-nottwil01/anat/sub-nottwil01_space-other_T2star_gmlabel-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s55270--0ff5b698dd4151b1ca8cb06f2e1b3d934323c306f67d1cf503b5dfcdbef07b96.nii.gz +/annex/objects/SHA256E-s55287--236dd744eacc590ca5b5b2d81a08b299aad8cba29b7fd772441a0941846ddb52.nii.gz diff --git a/derivatives/labels/sub-nottwil01/anat/sub-nottwil01_space-other_T2star_label-SC_seg.nii.gz b/derivatives/labels/sub-nottwil01/anat/sub-nottwil01_space-other_T2star_label-SC_seg.nii.gz index 16f0ba3e1f..7f1103ec46 100644 --- a/derivatives/labels/sub-nottwil01/anat/sub-nottwil01_space-other_T2star_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-nottwil01/anat/sub-nottwil01_space-other_T2star_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s8195--5b2b0b2eea2825acd948d80a693dabe681c4459aa3c838a59c0e7ed9a0754c40.nii.gz +/annex/objects/SHA256E-s8216--350e2d05b76b2cc8844dcb89fc8a9e037ce3fb52233fa93bd38c13177873f47b.nii.gz diff --git a/derivatives/labels/sub-nottwil01/anat/sub-nottwil01_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-nottwil01/anat/sub-nottwil01_space-other_T2star_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-nottwil01/anat/sub-nottwil01_space-other_T2star_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-nottwil01/anat/sub-nottwil01_space-other_T2w_csflabel-SC_seg.json b/derivatives/labels/sub-nottwil01/anat/sub-nottwil01_space-other_T2w_label-CSF_seg.json similarity index 100% rename from derivatives/labels/sub-nottwil01/anat/sub-nottwil01_space-other_T2w_csflabel-SC_seg.json rename to derivatives/labels/sub-nottwil01/anat/sub-nottwil01_space-other_T2w_label-CSF_seg.json diff --git a/derivatives/labels/sub-nottwil01/anat/sub-nottwil01_space-other_T2w_csflabel-SC_seg.nii.gz b/derivatives/labels/sub-nottwil01/anat/sub-nottwil01_space-other_T2w_label-CSF_seg.nii.gz similarity index 100% rename from derivatives/labels/sub-nottwil01/anat/sub-nottwil01_space-other_T2w_csflabel-SC_seg.nii.gz rename to derivatives/labels/sub-nottwil01/anat/sub-nottwil01_space-other_T2w_label-CSF_seg.nii.gz diff --git a/derivatives/labels/sub-nottwil01/anat/sub-nottwil01_space-other_T2w_label-canal_seg.json b/derivatives/labels/sub-nottwil01/anat/sub-nottwil01_space-other_T2w_label-canal_seg.json new file mode 100644 index 0000000000..9b765ae333 --- /dev/null +++ b/derivatives/labels/sub-nottwil01/anat/sub-nottwil01_space-other_T2w_label-canal_seg.json @@ -0,0 +1,11 @@ +{ + "SpatialReference": { + "Orientation": "RPI", + "Resampling": "0.8x0.8x0.8" + }, + "GeneratedBy": [ + { + "Description": "Created from label-CSF_seg" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-nottwil01/anat/sub-nottwil01_space-other_T2w_label-canal_seg.nii.gz b/derivatives/labels/sub-nottwil01/anat/sub-nottwil01_space-other_T2w_label-canal_seg.nii.gz new file mode 100644 index 0000000000..83fbf0c5d8 --- /dev/null +++ b/derivatives/labels/sub-nottwil01/anat/sub-nottwil01_space-other_T2w_label-canal_seg.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s136286--392398d5750be21e4f7bd13b759285da843b248c6cf388ddedb8640014873655.nii.gz diff --git a/derivatives/labels/sub-nottwil02/anat/sub-nottwil02_space-other_T1w_label-discs_dlabel.json b/derivatives/labels/sub-nottwil02/anat/sub-nottwil02_T1w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-nottwil02/anat/sub-nottwil02_space-other_T1w_label-discs_dlabel.json rename to derivatives/labels/sub-nottwil02/anat/sub-nottwil02_T1w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-nottwil02/anat/sub-nottwil02_space-other_T1w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-nottwil02/anat/sub-nottwil02_T1w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-nottwil02/anat/sub-nottwil02_space-other_T1w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-nottwil02/anat/sub-nottwil02_T1w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-nottwil02/anat/sub-nottwil02_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-nottwil02/anat/sub-nottwil02_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-nottwil02/anat/sub-nottwil02_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-nottwil02/anat/sub-nottwil02_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-nottwil02/anat/sub-nottwil02_T2star_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-nottwil02/anat/sub-nottwil02_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-nottwil02/anat/sub-nottwil02_T2star_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-nottwil02/anat/sub-nottwil02_space-other_T2w_label-discs_dlabel.json b/derivatives/labels/sub-nottwil02/anat/sub-nottwil02_T2w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-nottwil02/anat/sub-nottwil02_space-other_T2w_label-discs_dlabel.json rename to derivatives/labels/sub-nottwil02/anat/sub-nottwil02_T2w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-nottwil02/anat/sub-nottwil02_space-other_T2w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-nottwil02/anat/sub-nottwil02_T2w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-nottwil02/anat/sub-nottwil02_space-other_T2w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-nottwil02/anat/sub-nottwil02_T2w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-nottwil02/anat/sub-nottwil02_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-nottwil02/anat/sub-nottwil02_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-nottwil02/anat/sub-nottwil02_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-nottwil02/anat/sub-nottwil02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-nottwil02/anat/sub-nottwil02_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-nottwil02/anat/sub-nottwil02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-nottwil02/anat/sub-nottwil02_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-nottwil02/anat/sub-nottwil02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-nottwil02/anat/sub-nottwil02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-nottwil02/anat/sub-nottwil02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-nottwil02/anat/sub-nottwil02_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-nottwil02/anat/sub-nottwil02_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-nottwil02/anat/sub-nottwil02_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-nottwil02/anat/sub-nottwil02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-nottwil02/anat/sub-nottwil02_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-nottwil02/anat/sub-nottwil02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-nottwil02/anat/sub-nottwil02_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-nottwil02/anat/sub-nottwil02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-nottwil02/anat/sub-nottwil02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-nottwil02/anat/sub-nottwil02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-nottwil02/anat/sub-nottwil02_space-other_T2star_label-SC_seg.nii.gz b/derivatives/labels/sub-nottwil02/anat/sub-nottwil02_space-other_T2star_label-SC_seg.nii.gz index f7a723e735..719db4bca0 100644 --- a/derivatives/labels/sub-nottwil02/anat/sub-nottwil02_space-other_T2star_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-nottwil02/anat/sub-nottwil02_space-other_T2star_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s8247--177bf6f59843acc26a92202fde403bb06ab4e5e31fbc8c218b9dbe5c0511103c.nii.gz +/annex/objects/SHA256E-s8268--b8c0a5384f3395481740b17f890e2e0c7aed1ba429eb9ef9e93345f3940780ec.nii.gz diff --git a/derivatives/labels/sub-nottwil02/anat/sub-nottwil02_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-nottwil02/anat/sub-nottwil02_space-other_T2star_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-nottwil02/anat/sub-nottwil02_space-other_T2star_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-nottwil03/anat/sub-nottwil03_space-other_T1w_label-discs_dlabel.json b/derivatives/labels/sub-nottwil03/anat/sub-nottwil03_T1w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-nottwil03/anat/sub-nottwil03_space-other_T1w_label-discs_dlabel.json rename to derivatives/labels/sub-nottwil03/anat/sub-nottwil03_T1w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-nottwil03/anat/sub-nottwil03_space-other_T1w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-nottwil03/anat/sub-nottwil03_T1w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-nottwil03/anat/sub-nottwil03_space-other_T1w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-nottwil03/anat/sub-nottwil03_T1w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-nottwil03/anat/sub-nottwil03_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-nottwil03/anat/sub-nottwil03_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-nottwil03/anat/sub-nottwil03_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-nottwil03/anat/sub-nottwil03_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-nottwil03/anat/sub-nottwil03_T2star_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-nottwil03/anat/sub-nottwil03_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-nottwil03/anat/sub-nottwil03_T2star_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-nottwil03/anat/sub-nottwil03_space-other_T2w_label-discs_dlabel.json b/derivatives/labels/sub-nottwil03/anat/sub-nottwil03_T2w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-nottwil03/anat/sub-nottwil03_space-other_T2w_label-discs_dlabel.json rename to derivatives/labels/sub-nottwil03/anat/sub-nottwil03_T2w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-nottwil03/anat/sub-nottwil03_space-other_T2w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-nottwil03/anat/sub-nottwil03_T2w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-nottwil03/anat/sub-nottwil03_space-other_T2w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-nottwil03/anat/sub-nottwil03_T2w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-nottwil03/anat/sub-nottwil03_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-nottwil03/anat/sub-nottwil03_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-nottwil03/anat/sub-nottwil03_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-nottwil03/anat/sub-nottwil03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-nottwil03/anat/sub-nottwil03_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-nottwil03/anat/sub-nottwil03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-nottwil03/anat/sub-nottwil03_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-nottwil03/anat/sub-nottwil03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-nottwil03/anat/sub-nottwil03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-nottwil03/anat/sub-nottwil03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-nottwil03/anat/sub-nottwil03_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-nottwil03/anat/sub-nottwil03_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-nottwil03/anat/sub-nottwil03_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-nottwil03/anat/sub-nottwil03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-nottwil03/anat/sub-nottwil03_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-nottwil03/anat/sub-nottwil03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-nottwil03/anat/sub-nottwil03_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-nottwil03/anat/sub-nottwil03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-nottwil03/anat/sub-nottwil03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-nottwil03/anat/sub-nottwil03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-nottwil03/anat/sub-nottwil03_space-other_T2star_gmlabel-SC_seg.nii.gz b/derivatives/labels/sub-nottwil03/anat/sub-nottwil03_space-other_T2star_gmlabel-SC_seg.nii.gz index a73eb593e5..da1cb272cd 100644 --- a/derivatives/labels/sub-nottwil03/anat/sub-nottwil03_space-other_T2star_gmlabel-SC_seg.nii.gz +++ b/derivatives/labels/sub-nottwil03/anat/sub-nottwil03_space-other_T2star_gmlabel-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s55384--915ef38dd77133175f467f269467ecd37d00e00994b65b4a2d2fa10f09cee265.nii.gz +/annex/objects/SHA256E-s55401--a5be2a69c75c51fe12c5720d04a21901f95aae7032a47b32d47b8c9a3369ab53.nii.gz diff --git a/derivatives/labels/sub-nottwil03/anat/sub-nottwil03_space-other_T2star_label-SC_seg.nii.gz b/derivatives/labels/sub-nottwil03/anat/sub-nottwil03_space-other_T2star_label-SC_seg.nii.gz index 476ad8777d..5d74e350be 100644 --- a/derivatives/labels/sub-nottwil03/anat/sub-nottwil03_space-other_T2star_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-nottwil03/anat/sub-nottwil03_space-other_T2star_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s8178--b313af1ee61ab1532bbdd4828f9385daf844c55b72b8fa5f78c1283a470f0be1.nii.gz +/annex/objects/SHA256E-s8199--6cf2f84cd5b05c0d2e983b3b67d28e9b2eec600763da9317ccdcad42baf8e3bf.nii.gz diff --git a/derivatives/labels/sub-nottwil03/anat/sub-nottwil03_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-nottwil03/anat/sub-nottwil03_space-other_T2star_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-nottwil03/anat/sub-nottwil03_space-other_T2star_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-nottwil03/anat/sub-nottwil03_space-other_T2w_csflabel-SC_seg.json b/derivatives/labels/sub-nottwil03/anat/sub-nottwil03_space-other_T2w_label-CSF_seg.json similarity index 100% rename from derivatives/labels/sub-nottwil03/anat/sub-nottwil03_space-other_T2w_csflabel-SC_seg.json rename to derivatives/labels/sub-nottwil03/anat/sub-nottwil03_space-other_T2w_label-CSF_seg.json diff --git a/derivatives/labels/sub-nottwil03/anat/sub-nottwil03_space-other_T2w_csflabel-SC_seg.nii.gz b/derivatives/labels/sub-nottwil03/anat/sub-nottwil03_space-other_T2w_label-CSF_seg.nii.gz similarity index 100% rename from derivatives/labels/sub-nottwil03/anat/sub-nottwil03_space-other_T2w_csflabel-SC_seg.nii.gz rename to derivatives/labels/sub-nottwil03/anat/sub-nottwil03_space-other_T2w_label-CSF_seg.nii.gz diff --git a/derivatives/labels/sub-nottwil03/anat/sub-nottwil03_space-other_T2w_label-canal_seg.json b/derivatives/labels/sub-nottwil03/anat/sub-nottwil03_space-other_T2w_label-canal_seg.json new file mode 100644 index 0000000000..9b765ae333 --- /dev/null +++ b/derivatives/labels/sub-nottwil03/anat/sub-nottwil03_space-other_T2w_label-canal_seg.json @@ -0,0 +1,11 @@ +{ + "SpatialReference": { + "Orientation": "RPI", + "Resampling": "0.8x0.8x0.8" + }, + "GeneratedBy": [ + { + "Description": "Created from label-CSF_seg" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-nottwil03/anat/sub-nottwil03_space-other_T2w_label-canal_seg.nii.gz b/derivatives/labels/sub-nottwil03/anat/sub-nottwil03_space-other_T2w_label-canal_seg.nii.gz new file mode 100644 index 0000000000..12f1c1a189 --- /dev/null +++ b/derivatives/labels/sub-nottwil03/anat/sub-nottwil03_space-other_T2w_label-canal_seg.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s139693--3e227e0cf6c18bc811f74b92bd2c6695bf771fda7cb7f2e06c66fa2defbbe7ab.nii.gz diff --git a/derivatives/labels/sub-nottwil04/anat/sub-nottwil04_space-other_T1w_label-discs_dlabel.json b/derivatives/labels/sub-nottwil04/anat/sub-nottwil04_T1w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-nottwil04/anat/sub-nottwil04_space-other_T1w_label-discs_dlabel.json rename to derivatives/labels/sub-nottwil04/anat/sub-nottwil04_T1w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-nottwil04/anat/sub-nottwil04_space-other_T1w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-nottwil04/anat/sub-nottwil04_T1w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-nottwil04/anat/sub-nottwil04_space-other_T1w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-nottwil04/anat/sub-nottwil04_T1w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-nottwil04/anat/sub-nottwil04_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-nottwil04/anat/sub-nottwil04_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-nottwil04/anat/sub-nottwil04_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-nottwil04/anat/sub-nottwil04_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-nottwil04/anat/sub-nottwil04_T2star_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-nottwil04/anat/sub-nottwil04_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-nottwil04/anat/sub-nottwil04_T2star_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-nottwil04/anat/sub-nottwil04_space-other_T2w_label-discs_dlabel.json b/derivatives/labels/sub-nottwil04/anat/sub-nottwil04_T2w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-nottwil04/anat/sub-nottwil04_space-other_T2w_label-discs_dlabel.json rename to derivatives/labels/sub-nottwil04/anat/sub-nottwil04_T2w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-nottwil04/anat/sub-nottwil04_space-other_T2w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-nottwil04/anat/sub-nottwil04_T2w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-nottwil04/anat/sub-nottwil04_space-other_T2w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-nottwil04/anat/sub-nottwil04_T2w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-nottwil04/anat/sub-nottwil04_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-nottwil04/anat/sub-nottwil04_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-nottwil04/anat/sub-nottwil04_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-nottwil04/anat/sub-nottwil04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-nottwil04/anat/sub-nottwil04_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-nottwil04/anat/sub-nottwil04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-nottwil04/anat/sub-nottwil04_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-nottwil04/anat/sub-nottwil04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-nottwil04/anat/sub-nottwil04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-nottwil04/anat/sub-nottwil04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-nottwil04/anat/sub-nottwil04_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-nottwil04/anat/sub-nottwil04_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-nottwil04/anat/sub-nottwil04_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-nottwil04/anat/sub-nottwil04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-nottwil04/anat/sub-nottwil04_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-nottwil04/anat/sub-nottwil04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-nottwil04/anat/sub-nottwil04_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-nottwil04/anat/sub-nottwil04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-nottwil04/anat/sub-nottwil04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-nottwil04/anat/sub-nottwil04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-nottwil04/anat/sub-nottwil04_space-other_T2star_label-SC_seg.nii.gz b/derivatives/labels/sub-nottwil04/anat/sub-nottwil04_space-other_T2star_label-SC_seg.nii.gz index ffce699c79..600bfced8c 100644 --- a/derivatives/labels/sub-nottwil04/anat/sub-nottwil04_space-other_T2star_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-nottwil04/anat/sub-nottwil04_space-other_T2star_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s8431--fa02169d11c44ccbc78484224c80d4b4a716a5a275645d66ab535eaecb53fa2f.nii.gz +/annex/objects/SHA256E-s8452--f4a98f484db50acec22c355758489432fa1dd83bd29fd60a5338e5c4e57399ef.nii.gz diff --git a/derivatives/labels/sub-nottwil04/anat/sub-nottwil04_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-nottwil04/anat/sub-nottwil04_space-other_T2star_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-nottwil04/anat/sub-nottwil04_space-other_T2star_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-nottwil04/anat/sub-nottwil04_space-other_T2w_csflabel-SC_seg.json b/derivatives/labels/sub-nottwil04/anat/sub-nottwil04_space-other_T2w_label-CSF_seg.json similarity index 100% rename from derivatives/labels/sub-nottwil04/anat/sub-nottwil04_space-other_T2w_csflabel-SC_seg.json rename to derivatives/labels/sub-nottwil04/anat/sub-nottwil04_space-other_T2w_label-CSF_seg.json diff --git a/derivatives/labels/sub-nottwil04/anat/sub-nottwil04_space-other_T2w_csflabel-SC_seg.nii.gz b/derivatives/labels/sub-nottwil04/anat/sub-nottwil04_space-other_T2w_label-CSF_seg.nii.gz similarity index 100% rename from derivatives/labels/sub-nottwil04/anat/sub-nottwil04_space-other_T2w_csflabel-SC_seg.nii.gz rename to derivatives/labels/sub-nottwil04/anat/sub-nottwil04_space-other_T2w_label-CSF_seg.nii.gz diff --git a/derivatives/labels/sub-nottwil04/anat/sub-nottwil04_space-other_T2w_label-canal_seg.json b/derivatives/labels/sub-nottwil04/anat/sub-nottwil04_space-other_T2w_label-canal_seg.json new file mode 100644 index 0000000000..9b765ae333 --- /dev/null +++ b/derivatives/labels/sub-nottwil04/anat/sub-nottwil04_space-other_T2w_label-canal_seg.json @@ -0,0 +1,11 @@ +{ + "SpatialReference": { + "Orientation": "RPI", + "Resampling": "0.8x0.8x0.8" + }, + "GeneratedBy": [ + { + "Description": "Created from label-CSF_seg" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-nottwil04/anat/sub-nottwil04_space-other_T2w_label-canal_seg.nii.gz b/derivatives/labels/sub-nottwil04/anat/sub-nottwil04_space-other_T2w_label-canal_seg.nii.gz new file mode 100644 index 0000000000..ee16393b1e --- /dev/null +++ b/derivatives/labels/sub-nottwil04/anat/sub-nottwil04_space-other_T2w_label-canal_seg.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s133231--82020c8113407e5d99f03586182df7748e1d2ec60ead1a6dd4084b1e8d6df561.nii.gz diff --git a/derivatives/labels/sub-nottwil05/anat/sub-nottwil05_space-other_T1w_label-discs_dlabel.json b/derivatives/labels/sub-nottwil05/anat/sub-nottwil05_T1w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-nottwil05/anat/sub-nottwil05_space-other_T1w_label-discs_dlabel.json rename to derivatives/labels/sub-nottwil05/anat/sub-nottwil05_T1w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-nottwil05/anat/sub-nottwil05_space-other_T1w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-nottwil05/anat/sub-nottwil05_T1w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-nottwil05/anat/sub-nottwil05_space-other_T1w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-nottwil05/anat/sub-nottwil05_T1w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-nottwil05/anat/sub-nottwil05_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-nottwil05/anat/sub-nottwil05_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-nottwil05/anat/sub-nottwil05_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-nottwil05/anat/sub-nottwil05_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-nottwil05/anat/sub-nottwil05_T2star_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-nottwil05/anat/sub-nottwil05_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-nottwil05/anat/sub-nottwil05_T2star_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-nottwil05/anat/sub-nottwil05_space-other_T2w_label-discs_dlabel.json b/derivatives/labels/sub-nottwil05/anat/sub-nottwil05_T2w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-nottwil05/anat/sub-nottwil05_space-other_T2w_label-discs_dlabel.json rename to derivatives/labels/sub-nottwil05/anat/sub-nottwil05_T2w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-nottwil05/anat/sub-nottwil05_space-other_T2w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-nottwil05/anat/sub-nottwil05_T2w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-nottwil05/anat/sub-nottwil05_space-other_T2w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-nottwil05/anat/sub-nottwil05_T2w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-nottwil05/anat/sub-nottwil05_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-nottwil05/anat/sub-nottwil05_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-nottwil05/anat/sub-nottwil05_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-nottwil05/anat/sub-nottwil05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-nottwil05/anat/sub-nottwil05_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-nottwil05/anat/sub-nottwil05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-nottwil05/anat/sub-nottwil05_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-nottwil05/anat/sub-nottwil05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-nottwil05/anat/sub-nottwil05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-nottwil05/anat/sub-nottwil05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-nottwil05/anat/sub-nottwil05_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-nottwil05/anat/sub-nottwil05_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-nottwil05/anat/sub-nottwil05_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-nottwil05/anat/sub-nottwil05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-nottwil05/anat/sub-nottwil05_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-nottwil05/anat/sub-nottwil05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-nottwil05/anat/sub-nottwil05_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-nottwil05/anat/sub-nottwil05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-nottwil05/anat/sub-nottwil05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-nottwil05/anat/sub-nottwil05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-nottwil05/anat/sub-nottwil05_space-other_T2star_label-SC_seg.nii.gz b/derivatives/labels/sub-nottwil05/anat/sub-nottwil05_space-other_T2star_label-SC_seg.nii.gz index c36cb66898..f4383362e1 100644 --- a/derivatives/labels/sub-nottwil05/anat/sub-nottwil05_space-other_T2star_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-nottwil05/anat/sub-nottwil05_space-other_T2star_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s8277--69aea411f2ed69c0349d63954915e7aea9fb6ea3c5786b5f758997220dce3a57.nii.gz +/annex/objects/SHA256E-s8298--683e14de8971ff9aa5e8b1054f0387b7a8447128e28feb99e1735a47e0d7842d.nii.gz diff --git a/derivatives/labels/sub-nottwil05/anat/sub-nottwil05_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-nottwil05/anat/sub-nottwil05_space-other_T2star_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-nottwil05/anat/sub-nottwil05_space-other_T2star_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-nottwil06/anat/sub-nottwil06_space-other_T1w_label-discs_dlabel.json b/derivatives/labels/sub-nottwil06/anat/sub-nottwil06_T1w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-nottwil06/anat/sub-nottwil06_space-other_T1w_label-discs_dlabel.json rename to derivatives/labels/sub-nottwil06/anat/sub-nottwil06_T1w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-nottwil06/anat/sub-nottwil06_space-other_T1w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-nottwil06/anat/sub-nottwil06_T1w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-nottwil06/anat/sub-nottwil06_space-other_T1w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-nottwil06/anat/sub-nottwil06_T1w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-nottwil06/anat/sub-nottwil06_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-nottwil06/anat/sub-nottwil06_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-nottwil06/anat/sub-nottwil06_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-nottwil06/anat/sub-nottwil06_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-nottwil06/anat/sub-nottwil06_T2star_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-nottwil06/anat/sub-nottwil06_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-nottwil06/anat/sub-nottwil06_T2star_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-nottwil06/anat/sub-nottwil06_space-other_T2w_label-discs_dlabel.json b/derivatives/labels/sub-nottwil06/anat/sub-nottwil06_T2w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-nottwil06/anat/sub-nottwil06_space-other_T2w_label-discs_dlabel.json rename to derivatives/labels/sub-nottwil06/anat/sub-nottwil06_T2w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-nottwil06/anat/sub-nottwil06_space-other_T2w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-nottwil06/anat/sub-nottwil06_T2w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-nottwil06/anat/sub-nottwil06_space-other_T2w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-nottwil06/anat/sub-nottwil06_T2w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-nottwil06/anat/sub-nottwil06_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-nottwil06/anat/sub-nottwil06_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-nottwil06/anat/sub-nottwil06_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-nottwil06/anat/sub-nottwil06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-nottwil06/anat/sub-nottwil06_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-nottwil06/anat/sub-nottwil06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-nottwil06/anat/sub-nottwil06_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-nottwil06/anat/sub-nottwil06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-nottwil06/anat/sub-nottwil06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-nottwil06/anat/sub-nottwil06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-nottwil06/anat/sub-nottwil06_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-nottwil06/anat/sub-nottwil06_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-nottwil06/anat/sub-nottwil06_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-nottwil06/anat/sub-nottwil06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-nottwil06/anat/sub-nottwil06_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-nottwil06/anat/sub-nottwil06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-nottwil06/anat/sub-nottwil06_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-nottwil06/anat/sub-nottwil06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-nottwil06/anat/sub-nottwil06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-nottwil06/anat/sub-nottwil06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-nottwil06/anat/sub-nottwil06_space-other_T2star_label-SC_seg.nii.gz b/derivatives/labels/sub-nottwil06/anat/sub-nottwil06_space-other_T2star_label-SC_seg.nii.gz index d4fc267093..81bad343dc 100644 --- a/derivatives/labels/sub-nottwil06/anat/sub-nottwil06_space-other_T2star_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-nottwil06/anat/sub-nottwil06_space-other_T2star_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s8382--d26b03de7cf02ed4936f8f0afb301459ad71b2e74b06d0828e5eb1b19a89a89a.nii.gz +/annex/objects/SHA256E-s8403--cc4562ddc1676c712ff90234e5822405465d6e1495f94ea7f17218249566ced6.nii.gz diff --git a/derivatives/labels/sub-nottwil06/anat/sub-nottwil06_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-nottwil06/anat/sub-nottwil06_space-other_T2star_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-nottwil06/anat/sub-nottwil06_space-other_T2star_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-nwu01/anat/sub-nwu01_space-other_T1w_label-discs_dlabel.json b/derivatives/labels/sub-nwu01/anat/sub-nwu01_T1w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-nwu01/anat/sub-nwu01_space-other_T1w_label-discs_dlabel.json rename to derivatives/labels/sub-nwu01/anat/sub-nwu01_T1w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-nwu01/anat/sub-nwu01_space-other_T1w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-nwu01/anat/sub-nwu01_T1w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-nwu01/anat/sub-nwu01_space-other_T1w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-nwu01/anat/sub-nwu01_T1w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-nwu01/anat/sub-nwu01_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-nwu01/anat/sub-nwu01_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-nwu01/anat/sub-nwu01_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-nwu01/anat/sub-nwu01_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-nwu01/anat/sub-nwu01_T2star_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-nwu01/anat/sub-nwu01_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-nwu01/anat/sub-nwu01_T2star_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-nwu01/anat/sub-nwu01_space-other_T2w_label-discs_dlabel.json b/derivatives/labels/sub-nwu01/anat/sub-nwu01_T2w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-nwu01/anat/sub-nwu01_space-other_T2w_label-discs_dlabel.json rename to derivatives/labels/sub-nwu01/anat/sub-nwu01_T2w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-nwu01/anat/sub-nwu01_space-other_T2w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-nwu01/anat/sub-nwu01_T2w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-nwu01/anat/sub-nwu01_space-other_T2w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-nwu01/anat/sub-nwu01_T2w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-nwu01/anat/sub-nwu01_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-nwu01/anat/sub-nwu01_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-nwu01/anat/sub-nwu01_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-nwu01/anat/sub-nwu01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-nwu01/anat/sub-nwu01_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-nwu01/anat/sub-nwu01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-nwu01/anat/sub-nwu01_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-nwu01/anat/sub-nwu01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-nwu01/anat/sub-nwu01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-nwu01/anat/sub-nwu01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-nwu01/anat/sub-nwu01_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-nwu01/anat/sub-nwu01_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-nwu01/anat/sub-nwu01_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-nwu01/anat/sub-nwu01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-nwu01/anat/sub-nwu01_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-nwu01/anat/sub-nwu01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-nwu01/anat/sub-nwu01_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-nwu01/anat/sub-nwu01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-nwu01/anat/sub-nwu01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-nwu01/anat/sub-nwu01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-nwu01/anat/sub-nwu01_space-other_T2star_label-SC_seg.nii.gz b/derivatives/labels/sub-nwu01/anat/sub-nwu01_space-other_T2star_label-SC_seg.nii.gz index 554db451c3..552e1289fb 100644 --- a/derivatives/labels/sub-nwu01/anat/sub-nwu01_space-other_T2star_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-nwu01/anat/sub-nwu01_space-other_T2star_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s14771--5461f8cf0043497b4dcfef111d93e7b7c19f8baab6b6cfa74b67fe4177a07c04.nii.gz +/annex/objects/SHA256E-s14792--ff5a168ba672ce9d81e2034da3e48f017937137f07ee29d66f31bbec640fd6db.nii.gz diff --git a/derivatives/labels/sub-nwu01/anat/sub-nwu01_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-nwu01/anat/sub-nwu01_space-other_T2star_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-nwu01/anat/sub-nwu01_space-other_T2star_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-nwu02/anat/sub-nwu02_space-other_T1w_label-discs_dlabel.json b/derivatives/labels/sub-nwu02/anat/sub-nwu02_T1w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-nwu02/anat/sub-nwu02_space-other_T1w_label-discs_dlabel.json rename to derivatives/labels/sub-nwu02/anat/sub-nwu02_T1w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-nwu02/anat/sub-nwu02_space-other_T1w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-nwu02/anat/sub-nwu02_T1w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-nwu02/anat/sub-nwu02_space-other_T1w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-nwu02/anat/sub-nwu02_T1w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-nwu02/anat/sub-nwu02_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-nwu02/anat/sub-nwu02_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-nwu02/anat/sub-nwu02_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-nwu02/anat/sub-nwu02_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-nwu02/anat/sub-nwu02_T2star_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-nwu02/anat/sub-nwu02_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-nwu02/anat/sub-nwu02_T2star_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-nwu02/anat/sub-nwu02_space-other_T2w_label-discs_dlabel.json b/derivatives/labels/sub-nwu02/anat/sub-nwu02_T2w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-nwu02/anat/sub-nwu02_space-other_T2w_label-discs_dlabel.json rename to derivatives/labels/sub-nwu02/anat/sub-nwu02_T2w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-nwu02/anat/sub-nwu02_space-other_T2w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-nwu02/anat/sub-nwu02_T2w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-nwu02/anat/sub-nwu02_space-other_T2w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-nwu02/anat/sub-nwu02_T2w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-nwu02/anat/sub-nwu02_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-nwu02/anat/sub-nwu02_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-nwu02/anat/sub-nwu02_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-nwu02/anat/sub-nwu02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-nwu02/anat/sub-nwu02_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-nwu02/anat/sub-nwu02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-nwu02/anat/sub-nwu02_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-nwu02/anat/sub-nwu02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-nwu02/anat/sub-nwu02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-nwu02/anat/sub-nwu02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-nwu02/anat/sub-nwu02_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-nwu02/anat/sub-nwu02_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-nwu02/anat/sub-nwu02_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-nwu02/anat/sub-nwu02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-nwu02/anat/sub-nwu02_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-nwu02/anat/sub-nwu02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-nwu02/anat/sub-nwu02_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-nwu02/anat/sub-nwu02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-nwu02/anat/sub-nwu02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-nwu02/anat/sub-nwu02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-nwu02/anat/sub-nwu02_space-other_T2star_label-SC_seg.nii.gz b/derivatives/labels/sub-nwu02/anat/sub-nwu02_space-other_T2star_label-SC_seg.nii.gz index 903fb03881..9a852652c4 100644 --- a/derivatives/labels/sub-nwu02/anat/sub-nwu02_space-other_T2star_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-nwu02/anat/sub-nwu02_space-other_T2star_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s14648--dcfc86c0e774c1d0f253c5257ab29b7a8b23333816ac695e1ed11f764c3d7c18.nii.gz +/annex/objects/SHA256E-s14669--8c04a30f320783b545c15534935fe2e61d5b693d58590753fa24daabe1a95e2c.nii.gz diff --git a/derivatives/labels/sub-nwu02/anat/sub-nwu02_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-nwu02/anat/sub-nwu02_space-other_T2star_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-nwu02/anat/sub-nwu02_space-other_T2star_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-nwu03/anat/sub-nwu03_space-other_T1w_label-discs_dlabel.json b/derivatives/labels/sub-nwu03/anat/sub-nwu03_T1w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-nwu03/anat/sub-nwu03_space-other_T1w_label-discs_dlabel.json rename to derivatives/labels/sub-nwu03/anat/sub-nwu03_T1w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-nwu03/anat/sub-nwu03_space-other_T1w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-nwu03/anat/sub-nwu03_T1w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-nwu03/anat/sub-nwu03_space-other_T1w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-nwu03/anat/sub-nwu03_T1w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-nwu03/anat/sub-nwu03_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-nwu03/anat/sub-nwu03_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-nwu03/anat/sub-nwu03_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-nwu03/anat/sub-nwu03_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-nwu03/anat/sub-nwu03_T2star_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-nwu03/anat/sub-nwu03_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-nwu03/anat/sub-nwu03_T2star_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-nwu03/anat/sub-nwu03_space-other_T2w_label-discs_dlabel.json b/derivatives/labels/sub-nwu03/anat/sub-nwu03_T2w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-nwu03/anat/sub-nwu03_space-other_T2w_label-discs_dlabel.json rename to derivatives/labels/sub-nwu03/anat/sub-nwu03_T2w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-nwu03/anat/sub-nwu03_space-other_T2w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-nwu03/anat/sub-nwu03_T2w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-nwu03/anat/sub-nwu03_space-other_T2w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-nwu03/anat/sub-nwu03_T2w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-nwu03/anat/sub-nwu03_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-nwu03/anat/sub-nwu03_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-nwu03/anat/sub-nwu03_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-nwu03/anat/sub-nwu03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-nwu03/anat/sub-nwu03_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-nwu03/anat/sub-nwu03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-nwu03/anat/sub-nwu03_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-nwu03/anat/sub-nwu03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-nwu03/anat/sub-nwu03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-nwu03/anat/sub-nwu03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-nwu03/anat/sub-nwu03_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-nwu03/anat/sub-nwu03_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-nwu03/anat/sub-nwu03_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-nwu03/anat/sub-nwu03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-nwu03/anat/sub-nwu03_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-nwu03/anat/sub-nwu03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-nwu03/anat/sub-nwu03_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-nwu03/anat/sub-nwu03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-nwu03/anat/sub-nwu03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-nwu03/anat/sub-nwu03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-nwu03/anat/sub-nwu03_space-other_T2star_label-SC_seg.nii.gz b/derivatives/labels/sub-nwu03/anat/sub-nwu03_space-other_T2star_label-SC_seg.nii.gz index 4151d369df..a086f64d95 100644 --- a/derivatives/labels/sub-nwu03/anat/sub-nwu03_space-other_T2star_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-nwu03/anat/sub-nwu03_space-other_T2star_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s14719--297323603b9a2f7b6116bedc2c452baa2bc4b2bb4de8064fc3f931640d5f8c3a.nii.gz +/annex/objects/SHA256E-s14740--24f52635598a9e651f682b1938fecbb13361ca6220098fb31393f77d3bec6e06.nii.gz diff --git a/derivatives/labels/sub-nwu03/anat/sub-nwu03_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-nwu03/anat/sub-nwu03_space-other_T2star_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-nwu03/anat/sub-nwu03_space-other_T2star_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-nwu04/anat/sub-nwu04_space-other_T1w_label-discs_dlabel.json b/derivatives/labels/sub-nwu04/anat/sub-nwu04_T1w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-nwu04/anat/sub-nwu04_space-other_T1w_label-discs_dlabel.json rename to derivatives/labels/sub-nwu04/anat/sub-nwu04_T1w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-nwu04/anat/sub-nwu04_space-other_T1w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-nwu04/anat/sub-nwu04_T1w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-nwu04/anat/sub-nwu04_space-other_T1w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-nwu04/anat/sub-nwu04_T1w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-nwu04/anat/sub-nwu04_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-nwu04/anat/sub-nwu04_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-nwu04/anat/sub-nwu04_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-nwu04/anat/sub-nwu04_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-nwu04/anat/sub-nwu04_T2star_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-nwu04/anat/sub-nwu04_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-nwu04/anat/sub-nwu04_T2star_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-nwu04/anat/sub-nwu04_space-other_T2w_label-discs_dlabel.json b/derivatives/labels/sub-nwu04/anat/sub-nwu04_T2w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-nwu04/anat/sub-nwu04_space-other_T2w_label-discs_dlabel.json rename to derivatives/labels/sub-nwu04/anat/sub-nwu04_T2w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-nwu04/anat/sub-nwu04_space-other_T2w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-nwu04/anat/sub-nwu04_T2w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-nwu04/anat/sub-nwu04_space-other_T2w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-nwu04/anat/sub-nwu04_T2w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-nwu04/anat/sub-nwu04_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-nwu04/anat/sub-nwu04_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-nwu04/anat/sub-nwu04_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-nwu04/anat/sub-nwu04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-nwu04/anat/sub-nwu04_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-nwu04/anat/sub-nwu04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-nwu04/anat/sub-nwu04_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-nwu04/anat/sub-nwu04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-nwu04/anat/sub-nwu04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-nwu04/anat/sub-nwu04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-nwu04/anat/sub-nwu04_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-nwu04/anat/sub-nwu04_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-nwu04/anat/sub-nwu04_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-nwu04/anat/sub-nwu04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-nwu04/anat/sub-nwu04_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-nwu04/anat/sub-nwu04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-nwu04/anat/sub-nwu04_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-nwu04/anat/sub-nwu04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-nwu04/anat/sub-nwu04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-nwu04/anat/sub-nwu04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-nwu04/anat/sub-nwu04_space-other_T2star_label-SC_seg.nii.gz b/derivatives/labels/sub-nwu04/anat/sub-nwu04_space-other_T2star_label-SC_seg.nii.gz index 8b41163cbc..5843aa1aac 100644 --- a/derivatives/labels/sub-nwu04/anat/sub-nwu04_space-other_T2star_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-nwu04/anat/sub-nwu04_space-other_T2star_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s15039--844e03c9c657d557483804728e8976be4624578ca3ae69e1c5efc3559af108bb.nii.gz +/annex/objects/SHA256E-s15060--cac0496470404b059b1b787577577bb0fc9eb9a2b2ad35f7f02f86e21344db24.nii.gz diff --git a/derivatives/labels/sub-nwu04/anat/sub-nwu04_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-nwu04/anat/sub-nwu04_space-other_T2star_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-nwu04/anat/sub-nwu04_space-other_T2star_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-nwu05/anat/sub-nwu05_space-other_T1w_label-discs_dlabel.json b/derivatives/labels/sub-nwu05/anat/sub-nwu05_T1w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-nwu05/anat/sub-nwu05_space-other_T1w_label-discs_dlabel.json rename to derivatives/labels/sub-nwu05/anat/sub-nwu05_T1w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-nwu05/anat/sub-nwu05_space-other_T1w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-nwu05/anat/sub-nwu05_T1w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-nwu05/anat/sub-nwu05_space-other_T1w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-nwu05/anat/sub-nwu05_T1w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-nwu05/anat/sub-nwu05_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-nwu05/anat/sub-nwu05_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-nwu05/anat/sub-nwu05_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-nwu05/anat/sub-nwu05_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-nwu05/anat/sub-nwu05_T2star_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-nwu05/anat/sub-nwu05_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-nwu05/anat/sub-nwu05_T2star_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-nwu05/anat/sub-nwu05_space-other_T2w_label-discs_dlabel.json b/derivatives/labels/sub-nwu05/anat/sub-nwu05_T2w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-nwu05/anat/sub-nwu05_space-other_T2w_label-discs_dlabel.json rename to derivatives/labels/sub-nwu05/anat/sub-nwu05_T2w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-nwu05/anat/sub-nwu05_space-other_T2w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-nwu05/anat/sub-nwu05_T2w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-nwu05/anat/sub-nwu05_space-other_T2w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-nwu05/anat/sub-nwu05_T2w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-nwu05/anat/sub-nwu05_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-nwu05/anat/sub-nwu05_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-nwu05/anat/sub-nwu05_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-nwu05/anat/sub-nwu05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-nwu05/anat/sub-nwu05_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-nwu05/anat/sub-nwu05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-nwu05/anat/sub-nwu05_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-nwu05/anat/sub-nwu05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-nwu05/anat/sub-nwu05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-nwu05/anat/sub-nwu05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-nwu05/anat/sub-nwu05_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-nwu05/anat/sub-nwu05_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-nwu05/anat/sub-nwu05_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-nwu05/anat/sub-nwu05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-nwu05/anat/sub-nwu05_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-nwu05/anat/sub-nwu05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-nwu05/anat/sub-nwu05_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-nwu05/anat/sub-nwu05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-nwu05/anat/sub-nwu05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-nwu05/anat/sub-nwu05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-nwu05/anat/sub-nwu05_space-other_T2star_label-SC_seg.nii.gz b/derivatives/labels/sub-nwu05/anat/sub-nwu05_space-other_T2star_label-SC_seg.nii.gz index e764fb071c..b3d4cbc94e 100644 --- a/derivatives/labels/sub-nwu05/anat/sub-nwu05_space-other_T2star_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-nwu05/anat/sub-nwu05_space-other_T2star_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s14924--6087ed47cc1130a83b9c97a9af4f272e63d0c9845c00cf03fbce80d2c1f85a12.nii.gz +/annex/objects/SHA256E-s14947--af406979d3efd4eb6e9900f6e9f6d7e689f6216e4d9468b07f928a560b7922e5.nii.gz diff --git a/derivatives/labels/sub-nwu05/anat/sub-nwu05_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-nwu05/anat/sub-nwu05_space-other_T2star_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-nwu05/anat/sub-nwu05_space-other_T2star_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-nwu06/anat/sub-nwu06_space-other_T1w_label-discs_dlabel.json b/derivatives/labels/sub-nwu06/anat/sub-nwu06_T1w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-nwu06/anat/sub-nwu06_space-other_T1w_label-discs_dlabel.json rename to derivatives/labels/sub-nwu06/anat/sub-nwu06_T1w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-nwu06/anat/sub-nwu06_space-other_T1w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-nwu06/anat/sub-nwu06_T1w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-nwu06/anat/sub-nwu06_space-other_T1w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-nwu06/anat/sub-nwu06_T1w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-nwu06/anat/sub-nwu06_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-nwu06/anat/sub-nwu06_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-nwu06/anat/sub-nwu06_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-nwu06/anat/sub-nwu06_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-nwu06/anat/sub-nwu06_T2star_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-nwu06/anat/sub-nwu06_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-nwu06/anat/sub-nwu06_T2star_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-nwu06/anat/sub-nwu06_space-other_T2w_label-discs_dlabel.json b/derivatives/labels/sub-nwu06/anat/sub-nwu06_T2w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-nwu06/anat/sub-nwu06_space-other_T2w_label-discs_dlabel.json rename to derivatives/labels/sub-nwu06/anat/sub-nwu06_T2w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-nwu06/anat/sub-nwu06_space-other_T2w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-nwu06/anat/sub-nwu06_T2w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-nwu06/anat/sub-nwu06_space-other_T2w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-nwu06/anat/sub-nwu06_T2w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-nwu06/anat/sub-nwu06_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-nwu06/anat/sub-nwu06_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-nwu06/anat/sub-nwu06_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-nwu06/anat/sub-nwu06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-nwu06/anat/sub-nwu06_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-nwu06/anat/sub-nwu06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-nwu06/anat/sub-nwu06_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-nwu06/anat/sub-nwu06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-nwu06/anat/sub-nwu06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-nwu06/anat/sub-nwu06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-nwu06/anat/sub-nwu06_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-nwu06/anat/sub-nwu06_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-nwu06/anat/sub-nwu06_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-nwu06/anat/sub-nwu06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-nwu06/anat/sub-nwu06_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-nwu06/anat/sub-nwu06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-nwu06/anat/sub-nwu06_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-nwu06/anat/sub-nwu06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-nwu06/anat/sub-nwu06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-nwu06/anat/sub-nwu06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-nwu06/anat/sub-nwu06_space-other_T2star_label-SC_seg.nii.gz b/derivatives/labels/sub-nwu06/anat/sub-nwu06_space-other_T2star_label-SC_seg.nii.gz index fbb9c4c505..e2173ad250 100644 --- a/derivatives/labels/sub-nwu06/anat/sub-nwu06_space-other_T2star_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-nwu06/anat/sub-nwu06_space-other_T2star_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s14718--151c879881cf7814db56e15529e770c4fee642c4ada513700186bae2dbf4d9f5.nii.gz +/annex/objects/SHA256E-s14739--40a407f8e6d355fa6c00bcbfab6703913ea521aa6919752798228a344864e2dd.nii.gz diff --git a/derivatives/labels/sub-nwu06/anat/sub-nwu06_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-nwu06/anat/sub-nwu06_space-other_T2star_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-nwu06/anat/sub-nwu06_space-other_T2star_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-oxfordFmrib01/anat/sub-oxfordFmrib01_space-other_T1w_label-discs_dlabel.json b/derivatives/labels/sub-oxfordFmrib01/anat/sub-oxfordFmrib01_T1w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-oxfordFmrib01/anat/sub-oxfordFmrib01_space-other_T1w_label-discs_dlabel.json rename to derivatives/labels/sub-oxfordFmrib01/anat/sub-oxfordFmrib01_T1w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-oxfordFmrib01/anat/sub-oxfordFmrib01_space-other_T1w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-oxfordFmrib01/anat/sub-oxfordFmrib01_T1w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-oxfordFmrib01/anat/sub-oxfordFmrib01_space-other_T1w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-oxfordFmrib01/anat/sub-oxfordFmrib01_T1w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-oxfordFmrib01/anat/sub-oxfordFmrib01_space-other_T2w_label-discs_dlabel.json b/derivatives/labels/sub-oxfordFmrib01/anat/sub-oxfordFmrib01_T2w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-oxfordFmrib01/anat/sub-oxfordFmrib01_space-other_T2w_label-discs_dlabel.json rename to derivatives/labels/sub-oxfordFmrib01/anat/sub-oxfordFmrib01_T2w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-oxfordFmrib01/anat/sub-oxfordFmrib01_space-other_T2w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-oxfordFmrib01/anat/sub-oxfordFmrib01_T2w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-oxfordFmrib01/anat/sub-oxfordFmrib01_space-other_T2w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-oxfordFmrib01/anat/sub-oxfordFmrib01_T2w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-oxfordFmrib01/anat/sub-oxfordFmrib01_space-other_T2star_label-SC_seg.nii.gz b/derivatives/labels/sub-oxfordFmrib01/anat/sub-oxfordFmrib01_space-other_T2star_label-SC_seg.nii.gz index af0268541e..e2c989ce38 100644 --- a/derivatives/labels/sub-oxfordFmrib01/anat/sub-oxfordFmrib01_space-other_T2star_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-oxfordFmrib01/anat/sub-oxfordFmrib01_space-other_T2star_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s14935--3514993166cba67dd61d859c2f0d644f42080c58fadb165269d8e70daaf4d62d.nii.gz +/annex/objects/SHA256E-s14956--1f9cdcdf89da9705344c027ed31dd2cf325ef0a1df06bb17d57037a8b5b800e8.nii.gz diff --git a/derivatives/labels/sub-oxfordFmrib02/anat/sub-oxfordFmrib02_space-other_T1w_label-discs_dlabel.json b/derivatives/labels/sub-oxfordFmrib02/anat/sub-oxfordFmrib02_T1w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-oxfordFmrib02/anat/sub-oxfordFmrib02_space-other_T1w_label-discs_dlabel.json rename to derivatives/labels/sub-oxfordFmrib02/anat/sub-oxfordFmrib02_T1w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-oxfordFmrib02/anat/sub-oxfordFmrib02_space-other_T1w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-oxfordFmrib02/anat/sub-oxfordFmrib02_T1w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-oxfordFmrib02/anat/sub-oxfordFmrib02_space-other_T1w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-oxfordFmrib02/anat/sub-oxfordFmrib02_T1w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-oxfordFmrib02/anat/sub-oxfordFmrib02_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-oxfordFmrib02/anat/sub-oxfordFmrib02_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-oxfordFmrib02/anat/sub-oxfordFmrib02_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-oxfordFmrib02/anat/sub-oxfordFmrib02_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-oxfordFmrib02/anat/sub-oxfordFmrib02_T2star_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-oxfordFmrib02/anat/sub-oxfordFmrib02_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-oxfordFmrib02/anat/sub-oxfordFmrib02_T2star_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-oxfordFmrib02/anat/sub-oxfordFmrib02_space-other_T2w_label-discs_dlabel.json b/derivatives/labels/sub-oxfordFmrib02/anat/sub-oxfordFmrib02_T2w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-oxfordFmrib02/anat/sub-oxfordFmrib02_space-other_T2w_label-discs_dlabel.json rename to derivatives/labels/sub-oxfordFmrib02/anat/sub-oxfordFmrib02_T2w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-oxfordFmrib02/anat/sub-oxfordFmrib02_space-other_T2w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-oxfordFmrib02/anat/sub-oxfordFmrib02_T2w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-oxfordFmrib02/anat/sub-oxfordFmrib02_space-other_T2w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-oxfordFmrib02/anat/sub-oxfordFmrib02_T2w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-oxfordFmrib02/anat/sub-oxfordFmrib02_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-oxfordFmrib02/anat/sub-oxfordFmrib02_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-oxfordFmrib02/anat/sub-oxfordFmrib02_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-oxfordFmrib02/anat/sub-oxfordFmrib02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-oxfordFmrib02/anat/sub-oxfordFmrib02_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-oxfordFmrib02/anat/sub-oxfordFmrib02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-oxfordFmrib02/anat/sub-oxfordFmrib02_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-oxfordFmrib02/anat/sub-oxfordFmrib02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-oxfordFmrib02/anat/sub-oxfordFmrib02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-oxfordFmrib02/anat/sub-oxfordFmrib02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-oxfordFmrib02/anat/sub-oxfordFmrib02_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-oxfordFmrib02/anat/sub-oxfordFmrib02_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-oxfordFmrib02/anat/sub-oxfordFmrib02_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-oxfordFmrib02/anat/sub-oxfordFmrib02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-oxfordFmrib02/anat/sub-oxfordFmrib02_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-oxfordFmrib02/anat/sub-oxfordFmrib02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-oxfordFmrib02/anat/sub-oxfordFmrib02_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-oxfordFmrib02/anat/sub-oxfordFmrib02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-oxfordFmrib02/anat/sub-oxfordFmrib02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-oxfordFmrib02/anat/sub-oxfordFmrib02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-oxfordFmrib02/anat/sub-oxfordFmrib02_space-other_T2star_label-SC_seg.nii.gz b/derivatives/labels/sub-oxfordFmrib02/anat/sub-oxfordFmrib02_space-other_T2star_label-SC_seg.nii.gz index d25dc465a3..dc604a7b77 100644 --- a/derivatives/labels/sub-oxfordFmrib02/anat/sub-oxfordFmrib02_space-other_T2star_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-oxfordFmrib02/anat/sub-oxfordFmrib02_space-other_T2star_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s14886--a1faf91498ee949d4dfed00b83d7596bfca6b8c32c49ac07df78ca84c7dc076b.nii.gz +/annex/objects/SHA256E-s14907--833b74507625d5d8025be094e1273c5458a80b2ec41be5d0fe477d9931280af4.nii.gz diff --git a/derivatives/labels/sub-oxfordFmrib02/anat/sub-oxfordFmrib02_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-oxfordFmrib02/anat/sub-oxfordFmrib02_space-other_T2star_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-oxfordFmrib02/anat/sub-oxfordFmrib02_space-other_T2star_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-oxfordFmrib03/anat/sub-oxfordFmrib03_space-other_T1w_label-discs_dlabel.json b/derivatives/labels/sub-oxfordFmrib03/anat/sub-oxfordFmrib03_T1w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-oxfordFmrib03/anat/sub-oxfordFmrib03_space-other_T1w_label-discs_dlabel.json rename to derivatives/labels/sub-oxfordFmrib03/anat/sub-oxfordFmrib03_T1w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-oxfordFmrib03/anat/sub-oxfordFmrib03_space-other_T1w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-oxfordFmrib03/anat/sub-oxfordFmrib03_T1w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-oxfordFmrib03/anat/sub-oxfordFmrib03_space-other_T1w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-oxfordFmrib03/anat/sub-oxfordFmrib03_T1w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-oxfordFmrib03/anat/sub-oxfordFmrib03_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-oxfordFmrib03/anat/sub-oxfordFmrib03_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-oxfordFmrib03/anat/sub-oxfordFmrib03_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-oxfordFmrib03/anat/sub-oxfordFmrib03_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-oxfordFmrib03/anat/sub-oxfordFmrib03_T2star_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-oxfordFmrib03/anat/sub-oxfordFmrib03_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-oxfordFmrib03/anat/sub-oxfordFmrib03_T2star_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-oxfordFmrib03/anat/sub-oxfordFmrib03_space-other_T2w_label-discs_dlabel.json b/derivatives/labels/sub-oxfordFmrib03/anat/sub-oxfordFmrib03_T2w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-oxfordFmrib03/anat/sub-oxfordFmrib03_space-other_T2w_label-discs_dlabel.json rename to derivatives/labels/sub-oxfordFmrib03/anat/sub-oxfordFmrib03_T2w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-oxfordFmrib03/anat/sub-oxfordFmrib03_space-other_T2w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-oxfordFmrib03/anat/sub-oxfordFmrib03_T2w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-oxfordFmrib03/anat/sub-oxfordFmrib03_space-other_T2w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-oxfordFmrib03/anat/sub-oxfordFmrib03_T2w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-oxfordFmrib03/anat/sub-oxfordFmrib03_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-oxfordFmrib03/anat/sub-oxfordFmrib03_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-oxfordFmrib03/anat/sub-oxfordFmrib03_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-oxfordFmrib03/anat/sub-oxfordFmrib03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-oxfordFmrib03/anat/sub-oxfordFmrib03_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-oxfordFmrib03/anat/sub-oxfordFmrib03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-oxfordFmrib03/anat/sub-oxfordFmrib03_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-oxfordFmrib03/anat/sub-oxfordFmrib03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-oxfordFmrib03/anat/sub-oxfordFmrib03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-oxfordFmrib03/anat/sub-oxfordFmrib03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-oxfordFmrib03/anat/sub-oxfordFmrib03_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-oxfordFmrib03/anat/sub-oxfordFmrib03_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-oxfordFmrib03/anat/sub-oxfordFmrib03_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-oxfordFmrib03/anat/sub-oxfordFmrib03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-oxfordFmrib03/anat/sub-oxfordFmrib03_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-oxfordFmrib03/anat/sub-oxfordFmrib03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-oxfordFmrib03/anat/sub-oxfordFmrib03_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-oxfordFmrib03/anat/sub-oxfordFmrib03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-oxfordFmrib03/anat/sub-oxfordFmrib03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-oxfordFmrib03/anat/sub-oxfordFmrib03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-oxfordFmrib03/anat/sub-oxfordFmrib03_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.json b/derivatives/labels/sub-oxfordFmrib03/anat/sub-oxfordFmrib03_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.json new file mode 100644 index 0000000000..e537a137e5 --- /dev/null +++ b/derivatives/labels/sub-oxfordFmrib03/anat/sub-oxfordFmrib03_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.json @@ -0,0 +1,11 @@ +{ + "SpatialReference": { + "Orientation": "RPI", + "Resampling": "1x1x1" + }, + "GeneratedBy": [ + { + "Description": "Manual label of C2 and C5 mid-vertebrae, at the center of the spinal cord." + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-oxfordFmrib03/anat/sub-oxfordFmrib03_space-other_T1w_RPI_r_labels-manual.nii.gz b/derivatives/labels/sub-oxfordFmrib03/anat/sub-oxfordFmrib03_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-oxfordFmrib03/anat/sub-oxfordFmrib03_space-other_T1w_RPI_r_labels-manual.nii.gz rename to derivatives/labels/sub-oxfordFmrib03/anat/sub-oxfordFmrib03_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.nii.gz diff --git a/derivatives/labels/sub-oxfordFmrib03/anat/sub-oxfordFmrib03_space-other_T2star_label-SC_seg.nii.gz b/derivatives/labels/sub-oxfordFmrib03/anat/sub-oxfordFmrib03_space-other_T2star_label-SC_seg.nii.gz index cfe492ceef..14362c2a88 100644 --- a/derivatives/labels/sub-oxfordFmrib03/anat/sub-oxfordFmrib03_space-other_T2star_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-oxfordFmrib03/anat/sub-oxfordFmrib03_space-other_T2star_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s14894--e06c08afa0dd8c542741c94a664db521c49aa98688313b88782020a43c80c51e.nii.gz +/annex/objects/SHA256E-s14915--75de07b3260931ab409a7cd81eb84f57b69f6270b553ce5250f957673eed35f1.nii.gz diff --git a/derivatives/labels/sub-oxfordFmrib03/anat/sub-oxfordFmrib03_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-oxfordFmrib03/anat/sub-oxfordFmrib03_space-other_T2star_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-oxfordFmrib03/anat/sub-oxfordFmrib03_space-other_T2star_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-oxfordFmrib04/anat/sub-oxfordFmrib04_space-other_T1w_label-discs_dlabel.json b/derivatives/labels/sub-oxfordFmrib04/anat/sub-oxfordFmrib04_T1w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-oxfordFmrib04/anat/sub-oxfordFmrib04_space-other_T1w_label-discs_dlabel.json rename to derivatives/labels/sub-oxfordFmrib04/anat/sub-oxfordFmrib04_T1w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-oxfordFmrib04/anat/sub-oxfordFmrib04_space-other_T1w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-oxfordFmrib04/anat/sub-oxfordFmrib04_T1w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-oxfordFmrib04/anat/sub-oxfordFmrib04_space-other_T1w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-oxfordFmrib04/anat/sub-oxfordFmrib04_T1w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-oxfordFmrib04/anat/sub-oxfordFmrib04_space-other_T2w_label-discs_dlabel.json b/derivatives/labels/sub-oxfordFmrib04/anat/sub-oxfordFmrib04_T2w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-oxfordFmrib04/anat/sub-oxfordFmrib04_space-other_T2w_label-discs_dlabel.json rename to derivatives/labels/sub-oxfordFmrib04/anat/sub-oxfordFmrib04_T2w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-oxfordFmrib04/anat/sub-oxfordFmrib04_space-other_T2w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-oxfordFmrib04/anat/sub-oxfordFmrib04_T2w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-oxfordFmrib04/anat/sub-oxfordFmrib04_space-other_T2w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-oxfordFmrib04/anat/sub-oxfordFmrib04_T2w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-oxfordFmrib04/anat/sub-oxfordFmrib04_space-other_T2star_label-SC_seg.nii.gz b/derivatives/labels/sub-oxfordFmrib04/anat/sub-oxfordFmrib04_space-other_T2star_label-SC_seg.nii.gz index f40d7aa857..d9dc2cdc0a 100644 --- a/derivatives/labels/sub-oxfordFmrib04/anat/sub-oxfordFmrib04_space-other_T2star_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-oxfordFmrib04/anat/sub-oxfordFmrib04_space-other_T2star_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s14793--f53f41340c9407bee79332702751d5615c6d1e92dd7809b243e07292e417fbc9.nii.gz +/annex/objects/SHA256E-s14814--fbe47e93a1a7ef35faab5f7c4c96f8d6b569bede3b18c2c257ec67c3fdf9f314.nii.gz diff --git a/derivatives/labels/sub-oxfordFmrib05/anat/sub-oxfordFmrib05_space-other_T1w_label-discs_dlabel.json b/derivatives/labels/sub-oxfordFmrib05/anat/sub-oxfordFmrib05_T1w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-oxfordFmrib05/anat/sub-oxfordFmrib05_space-other_T1w_label-discs_dlabel.json rename to derivatives/labels/sub-oxfordFmrib05/anat/sub-oxfordFmrib05_T1w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-oxfordFmrib05/anat/sub-oxfordFmrib05_space-other_T1w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-oxfordFmrib05/anat/sub-oxfordFmrib05_T1w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-oxfordFmrib05/anat/sub-oxfordFmrib05_space-other_T1w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-oxfordFmrib05/anat/sub-oxfordFmrib05_T1w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-oxfordFmrib05/anat/sub-oxfordFmrib05_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-oxfordFmrib05/anat/sub-oxfordFmrib05_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-oxfordFmrib05/anat/sub-oxfordFmrib05_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-oxfordFmrib05/anat/sub-oxfordFmrib05_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-oxfordFmrib05/anat/sub-oxfordFmrib05_T2star_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-oxfordFmrib05/anat/sub-oxfordFmrib05_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-oxfordFmrib05/anat/sub-oxfordFmrib05_T2star_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-oxfordFmrib05/anat/sub-oxfordFmrib05_space-other_T2w_label-discs_dlabel.json b/derivatives/labels/sub-oxfordFmrib05/anat/sub-oxfordFmrib05_T2w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-oxfordFmrib05/anat/sub-oxfordFmrib05_space-other_T2w_label-discs_dlabel.json rename to derivatives/labels/sub-oxfordFmrib05/anat/sub-oxfordFmrib05_T2w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-oxfordFmrib05/anat/sub-oxfordFmrib05_space-other_T2w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-oxfordFmrib05/anat/sub-oxfordFmrib05_T2w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-oxfordFmrib05/anat/sub-oxfordFmrib05_space-other_T2w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-oxfordFmrib05/anat/sub-oxfordFmrib05_T2w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-oxfordFmrib05/anat/sub-oxfordFmrib05_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-oxfordFmrib05/anat/sub-oxfordFmrib05_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-oxfordFmrib05/anat/sub-oxfordFmrib05_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-oxfordFmrib05/anat/sub-oxfordFmrib05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-oxfordFmrib05/anat/sub-oxfordFmrib05_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-oxfordFmrib05/anat/sub-oxfordFmrib05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-oxfordFmrib05/anat/sub-oxfordFmrib05_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-oxfordFmrib05/anat/sub-oxfordFmrib05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-oxfordFmrib05/anat/sub-oxfordFmrib05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-oxfordFmrib05/anat/sub-oxfordFmrib05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-oxfordFmrib05/anat/sub-oxfordFmrib05_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-oxfordFmrib05/anat/sub-oxfordFmrib05_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-oxfordFmrib05/anat/sub-oxfordFmrib05_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-oxfordFmrib05/anat/sub-oxfordFmrib05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-oxfordFmrib05/anat/sub-oxfordFmrib05_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-oxfordFmrib05/anat/sub-oxfordFmrib05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-oxfordFmrib05/anat/sub-oxfordFmrib05_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-oxfordFmrib05/anat/sub-oxfordFmrib05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-oxfordFmrib05/anat/sub-oxfordFmrib05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-oxfordFmrib05/anat/sub-oxfordFmrib05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-oxfordFmrib05/anat/sub-oxfordFmrib05_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.json b/derivatives/labels/sub-oxfordFmrib05/anat/sub-oxfordFmrib05_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.json new file mode 100644 index 0000000000..e537a137e5 --- /dev/null +++ b/derivatives/labels/sub-oxfordFmrib05/anat/sub-oxfordFmrib05_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.json @@ -0,0 +1,11 @@ +{ + "SpatialReference": { + "Orientation": "RPI", + "Resampling": "1x1x1" + }, + "GeneratedBy": [ + { + "Description": "Manual label of C2 and C5 mid-vertebrae, at the center of the spinal cord." + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-oxfordFmrib05/anat/sub-oxfordFmrib05_space-other_T1w_RPI_r_labels-manual.nii.gz b/derivatives/labels/sub-oxfordFmrib05/anat/sub-oxfordFmrib05_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-oxfordFmrib05/anat/sub-oxfordFmrib05_space-other_T1w_RPI_r_labels-manual.nii.gz rename to derivatives/labels/sub-oxfordFmrib05/anat/sub-oxfordFmrib05_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.nii.gz diff --git a/derivatives/labels/sub-oxfordFmrib05/anat/sub-oxfordFmrib05_space-other_T2star_label-SC_seg.nii.gz b/derivatives/labels/sub-oxfordFmrib05/anat/sub-oxfordFmrib05_space-other_T2star_label-SC_seg.nii.gz index ab47a1a37a..d605ac93e4 100644 --- a/derivatives/labels/sub-oxfordFmrib05/anat/sub-oxfordFmrib05_space-other_T2star_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-oxfordFmrib05/anat/sub-oxfordFmrib05_space-other_T2star_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s14904--c1936d18cf09345972ac443fa5165887e37143b0dc87e3ae3ca688a9fb09c35a.nii.gz +/annex/objects/SHA256E-s14925--0e0ab958dba7e6242a8b6f5f7990475bc1f4302c392b194f8bbdea2f6ac4e33e.nii.gz diff --git a/derivatives/labels/sub-oxfordFmrib05/anat/sub-oxfordFmrib05_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-oxfordFmrib05/anat/sub-oxfordFmrib05_space-other_T2star_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-oxfordFmrib05/anat/sub-oxfordFmrib05_space-other_T2star_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-oxfordFmrib06/anat/sub-oxfordFmrib06_space-other_T1w_label-discs_dlabel.json b/derivatives/labels/sub-oxfordFmrib06/anat/sub-oxfordFmrib06_T1w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-oxfordFmrib06/anat/sub-oxfordFmrib06_space-other_T1w_label-discs_dlabel.json rename to derivatives/labels/sub-oxfordFmrib06/anat/sub-oxfordFmrib06_T1w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-oxfordFmrib06/anat/sub-oxfordFmrib06_space-other_T1w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-oxfordFmrib06/anat/sub-oxfordFmrib06_T1w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-oxfordFmrib06/anat/sub-oxfordFmrib06_space-other_T1w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-oxfordFmrib06/anat/sub-oxfordFmrib06_T1w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-oxfordFmrib06/anat/sub-oxfordFmrib06_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-oxfordFmrib06/anat/sub-oxfordFmrib06_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-oxfordFmrib06/anat/sub-oxfordFmrib06_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-oxfordFmrib06/anat/sub-oxfordFmrib06_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-oxfordFmrib06/anat/sub-oxfordFmrib06_T2star_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-oxfordFmrib06/anat/sub-oxfordFmrib06_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-oxfordFmrib06/anat/sub-oxfordFmrib06_T2star_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-oxfordFmrib06/anat/sub-oxfordFmrib06_space-other_T2w_label-discs_dlabel.json b/derivatives/labels/sub-oxfordFmrib06/anat/sub-oxfordFmrib06_T2w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-oxfordFmrib06/anat/sub-oxfordFmrib06_space-other_T2w_label-discs_dlabel.json rename to derivatives/labels/sub-oxfordFmrib06/anat/sub-oxfordFmrib06_T2w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-oxfordFmrib06/anat/sub-oxfordFmrib06_space-other_T2w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-oxfordFmrib06/anat/sub-oxfordFmrib06_T2w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-oxfordFmrib06/anat/sub-oxfordFmrib06_space-other_T2w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-oxfordFmrib06/anat/sub-oxfordFmrib06_T2w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-oxfordFmrib06/anat/sub-oxfordFmrib06_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-oxfordFmrib06/anat/sub-oxfordFmrib06_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-oxfordFmrib06/anat/sub-oxfordFmrib06_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-oxfordFmrib06/anat/sub-oxfordFmrib06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-oxfordFmrib06/anat/sub-oxfordFmrib06_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-oxfordFmrib06/anat/sub-oxfordFmrib06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-oxfordFmrib06/anat/sub-oxfordFmrib06_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-oxfordFmrib06/anat/sub-oxfordFmrib06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-oxfordFmrib06/anat/sub-oxfordFmrib06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-oxfordFmrib06/anat/sub-oxfordFmrib06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-oxfordFmrib06/anat/sub-oxfordFmrib06_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-oxfordFmrib06/anat/sub-oxfordFmrib06_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-oxfordFmrib06/anat/sub-oxfordFmrib06_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-oxfordFmrib06/anat/sub-oxfordFmrib06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-oxfordFmrib06/anat/sub-oxfordFmrib06_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-oxfordFmrib06/anat/sub-oxfordFmrib06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-oxfordFmrib06/anat/sub-oxfordFmrib06_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-oxfordFmrib06/anat/sub-oxfordFmrib06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-oxfordFmrib06/anat/sub-oxfordFmrib06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-oxfordFmrib06/anat/sub-oxfordFmrib06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-oxfordFmrib06/anat/sub-oxfordFmrib06_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.json b/derivatives/labels/sub-oxfordFmrib06/anat/sub-oxfordFmrib06_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.json new file mode 100644 index 0000000000..e537a137e5 --- /dev/null +++ b/derivatives/labels/sub-oxfordFmrib06/anat/sub-oxfordFmrib06_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.json @@ -0,0 +1,11 @@ +{ + "SpatialReference": { + "Orientation": "RPI", + "Resampling": "1x1x1" + }, + "GeneratedBy": [ + { + "Description": "Manual label of C2 and C5 mid-vertebrae, at the center of the spinal cord." + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-oxfordFmrib06/anat/sub-oxfordFmrib06_space-other_T1w_RPI_r_labels-manual.nii.gz b/derivatives/labels/sub-oxfordFmrib06/anat/sub-oxfordFmrib06_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-oxfordFmrib06/anat/sub-oxfordFmrib06_space-other_T1w_RPI_r_labels-manual.nii.gz rename to derivatives/labels/sub-oxfordFmrib06/anat/sub-oxfordFmrib06_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.nii.gz diff --git a/derivatives/labels/sub-oxfordFmrib06/anat/sub-oxfordFmrib06_space-other_T2star_label-SC_seg.nii.gz b/derivatives/labels/sub-oxfordFmrib06/anat/sub-oxfordFmrib06_space-other_T2star_label-SC_seg.nii.gz index 09c11cd7f9..3c241a7c93 100644 --- a/derivatives/labels/sub-oxfordFmrib06/anat/sub-oxfordFmrib06_space-other_T2star_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-oxfordFmrib06/anat/sub-oxfordFmrib06_space-other_T2star_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s14868--2f9879e4d81acf20afba36ee964fb980460f83caa3636616daa25664069cbb45.nii.gz +/annex/objects/SHA256E-s14889--84fef5e14a21c61e6f4051daf750a9bfbb5236f2c61242a6ed9fdb77c1e5a4f8.nii.gz diff --git a/derivatives/labels/sub-oxfordFmrib06/anat/sub-oxfordFmrib06_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-oxfordFmrib06/anat/sub-oxfordFmrib06_space-other_T2star_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-oxfordFmrib06/anat/sub-oxfordFmrib06_space-other_T2star_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-oxfordFmrib07/anat/sub-oxfordFmrib07_space-other_T1w_label-discs_dlabel.json b/derivatives/labels/sub-oxfordFmrib07/anat/sub-oxfordFmrib07_T1w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-oxfordFmrib07/anat/sub-oxfordFmrib07_space-other_T1w_label-discs_dlabel.json rename to derivatives/labels/sub-oxfordFmrib07/anat/sub-oxfordFmrib07_T1w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-oxfordFmrib07/anat/sub-oxfordFmrib07_space-other_T1w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-oxfordFmrib07/anat/sub-oxfordFmrib07_T1w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-oxfordFmrib07/anat/sub-oxfordFmrib07_space-other_T1w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-oxfordFmrib07/anat/sub-oxfordFmrib07_T1w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-oxfordFmrib07/anat/sub-oxfordFmrib07_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-oxfordFmrib07/anat/sub-oxfordFmrib07_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-oxfordFmrib07/anat/sub-oxfordFmrib07_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-oxfordFmrib07/anat/sub-oxfordFmrib07_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-oxfordFmrib07/anat/sub-oxfordFmrib07_T2star_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-oxfordFmrib07/anat/sub-oxfordFmrib07_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-oxfordFmrib07/anat/sub-oxfordFmrib07_T2star_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-oxfordFmrib07/anat/sub-oxfordFmrib07_space-other_T2w_label-discs_dlabel.json b/derivatives/labels/sub-oxfordFmrib07/anat/sub-oxfordFmrib07_T2w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-oxfordFmrib07/anat/sub-oxfordFmrib07_space-other_T2w_label-discs_dlabel.json rename to derivatives/labels/sub-oxfordFmrib07/anat/sub-oxfordFmrib07_T2w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-oxfordFmrib07/anat/sub-oxfordFmrib07_space-other_T2w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-oxfordFmrib07/anat/sub-oxfordFmrib07_T2w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-oxfordFmrib07/anat/sub-oxfordFmrib07_space-other_T2w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-oxfordFmrib07/anat/sub-oxfordFmrib07_T2w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-oxfordFmrib07/anat/sub-oxfordFmrib07_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-oxfordFmrib07/anat/sub-oxfordFmrib07_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-oxfordFmrib07/anat/sub-oxfordFmrib07_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-oxfordFmrib07/anat/sub-oxfordFmrib07_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-oxfordFmrib07/anat/sub-oxfordFmrib07_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-oxfordFmrib07/anat/sub-oxfordFmrib07_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-oxfordFmrib07/anat/sub-oxfordFmrib07_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-oxfordFmrib07/anat/sub-oxfordFmrib07_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-oxfordFmrib07/anat/sub-oxfordFmrib07_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-oxfordFmrib07/anat/sub-oxfordFmrib07_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-oxfordFmrib07/anat/sub-oxfordFmrib07_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-oxfordFmrib07/anat/sub-oxfordFmrib07_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-oxfordFmrib07/anat/sub-oxfordFmrib07_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-oxfordFmrib07/anat/sub-oxfordFmrib07_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-oxfordFmrib07/anat/sub-oxfordFmrib07_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-oxfordFmrib07/anat/sub-oxfordFmrib07_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-oxfordFmrib07/anat/sub-oxfordFmrib07_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-oxfordFmrib07/anat/sub-oxfordFmrib07_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-oxfordFmrib07/anat/sub-oxfordFmrib07_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-oxfordFmrib07/anat/sub-oxfordFmrib07_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-oxfordFmrib07/anat/sub-oxfordFmrib07_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.json b/derivatives/labels/sub-oxfordFmrib07/anat/sub-oxfordFmrib07_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.json new file mode 100644 index 0000000000..e537a137e5 --- /dev/null +++ b/derivatives/labels/sub-oxfordFmrib07/anat/sub-oxfordFmrib07_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.json @@ -0,0 +1,11 @@ +{ + "SpatialReference": { + "Orientation": "RPI", + "Resampling": "1x1x1" + }, + "GeneratedBy": [ + { + "Description": "Manual label of C2 and C5 mid-vertebrae, at the center of the spinal cord." + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-oxfordFmrib07/anat/sub-oxfordFmrib07_space-other_T1w_RPI_r_labels-manual.nii.gz b/derivatives/labels/sub-oxfordFmrib07/anat/sub-oxfordFmrib07_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-oxfordFmrib07/anat/sub-oxfordFmrib07_space-other_T1w_RPI_r_labels-manual.nii.gz rename to derivatives/labels/sub-oxfordFmrib07/anat/sub-oxfordFmrib07_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.nii.gz diff --git a/derivatives/labels/sub-oxfordFmrib07/anat/sub-oxfordFmrib07_space-other_T2star_label-SC_seg.nii.gz b/derivatives/labels/sub-oxfordFmrib07/anat/sub-oxfordFmrib07_space-other_T2star_label-SC_seg.nii.gz index cf7b5f6c51..8d09d443d1 100644 --- a/derivatives/labels/sub-oxfordFmrib07/anat/sub-oxfordFmrib07_space-other_T2star_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-oxfordFmrib07/anat/sub-oxfordFmrib07_space-other_T2star_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s15069--17f4b135cee2f2baa07a54fcee4f53a991c5cb8c7dd54761998c52cd5d14d5a3.nii.gz +/annex/objects/SHA256E-s15090--28f098fa4d57b6f6fd3ad70099c61e6c0283541ac882c0c3a82955841ac7aa01.nii.gz diff --git a/derivatives/labels/sub-oxfordFmrib07/anat/sub-oxfordFmrib07_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-oxfordFmrib07/anat/sub-oxfordFmrib07_space-other_T2star_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-oxfordFmrib07/anat/sub-oxfordFmrib07_space-other_T2star_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-oxfordFmrib08/anat/sub-oxfordFmrib08_space-other_T1w_label-discs_dlabel.json b/derivatives/labels/sub-oxfordFmrib08/anat/sub-oxfordFmrib08_T1w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-oxfordFmrib08/anat/sub-oxfordFmrib08_space-other_T1w_label-discs_dlabel.json rename to derivatives/labels/sub-oxfordFmrib08/anat/sub-oxfordFmrib08_T1w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-oxfordFmrib08/anat/sub-oxfordFmrib08_space-other_T1w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-oxfordFmrib08/anat/sub-oxfordFmrib08_T1w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-oxfordFmrib08/anat/sub-oxfordFmrib08_space-other_T1w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-oxfordFmrib08/anat/sub-oxfordFmrib08_T1w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-oxfordFmrib08/anat/sub-oxfordFmrib08_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-oxfordFmrib08/anat/sub-oxfordFmrib08_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-oxfordFmrib08/anat/sub-oxfordFmrib08_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-oxfordFmrib08/anat/sub-oxfordFmrib08_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-oxfordFmrib08/anat/sub-oxfordFmrib08_T2star_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-oxfordFmrib08/anat/sub-oxfordFmrib08_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-oxfordFmrib08/anat/sub-oxfordFmrib08_T2star_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-oxfordFmrib08/anat/sub-oxfordFmrib08_space-other_T2w_label-discs_dlabel.json b/derivatives/labels/sub-oxfordFmrib08/anat/sub-oxfordFmrib08_T2w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-oxfordFmrib08/anat/sub-oxfordFmrib08_space-other_T2w_label-discs_dlabel.json rename to derivatives/labels/sub-oxfordFmrib08/anat/sub-oxfordFmrib08_T2w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-oxfordFmrib08/anat/sub-oxfordFmrib08_space-other_T2w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-oxfordFmrib08/anat/sub-oxfordFmrib08_T2w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-oxfordFmrib08/anat/sub-oxfordFmrib08_space-other_T2w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-oxfordFmrib08/anat/sub-oxfordFmrib08_T2w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-oxfordFmrib08/anat/sub-oxfordFmrib08_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-oxfordFmrib08/anat/sub-oxfordFmrib08_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-oxfordFmrib08/anat/sub-oxfordFmrib08_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-oxfordFmrib08/anat/sub-oxfordFmrib08_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-oxfordFmrib08/anat/sub-oxfordFmrib08_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-oxfordFmrib08/anat/sub-oxfordFmrib08_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-oxfordFmrib08/anat/sub-oxfordFmrib08_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-oxfordFmrib08/anat/sub-oxfordFmrib08_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-oxfordFmrib08/anat/sub-oxfordFmrib08_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-oxfordFmrib08/anat/sub-oxfordFmrib08_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-oxfordFmrib08/anat/sub-oxfordFmrib08_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-oxfordFmrib08/anat/sub-oxfordFmrib08_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-oxfordFmrib08/anat/sub-oxfordFmrib08_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-oxfordFmrib08/anat/sub-oxfordFmrib08_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-oxfordFmrib08/anat/sub-oxfordFmrib08_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-oxfordFmrib08/anat/sub-oxfordFmrib08_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-oxfordFmrib08/anat/sub-oxfordFmrib08_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-oxfordFmrib08/anat/sub-oxfordFmrib08_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-oxfordFmrib08/anat/sub-oxfordFmrib08_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-oxfordFmrib08/anat/sub-oxfordFmrib08_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-oxfordFmrib08/anat/sub-oxfordFmrib08_space-other_T2star_label-SC_seg.nii.gz b/derivatives/labels/sub-oxfordFmrib08/anat/sub-oxfordFmrib08_space-other_T2star_label-SC_seg.nii.gz index 21b3107460..6b185a135d 100644 --- a/derivatives/labels/sub-oxfordFmrib08/anat/sub-oxfordFmrib08_space-other_T2star_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-oxfordFmrib08/anat/sub-oxfordFmrib08_space-other_T2star_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s14784--bebfe73ec55dd17478624bcd50b8a31be4e7ce727d52b1e47f493734c58b55d1.nii.gz +/annex/objects/SHA256E-s14805--6adb9f4c31836d3a97b7f0017d07853a7985a252716344463c07debe800033d9.nii.gz diff --git a/derivatives/labels/sub-oxfordFmrib08/anat/sub-oxfordFmrib08_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-oxfordFmrib08/anat/sub-oxfordFmrib08_space-other_T2star_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-oxfordFmrib08/anat/sub-oxfordFmrib08_space-other_T2star_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-oxfordFmrib09/anat/sub-oxfordFmrib09_space-other_T1w_label-discs_dlabel.json b/derivatives/labels/sub-oxfordFmrib09/anat/sub-oxfordFmrib09_T1w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-oxfordFmrib09/anat/sub-oxfordFmrib09_space-other_T1w_label-discs_dlabel.json rename to derivatives/labels/sub-oxfordFmrib09/anat/sub-oxfordFmrib09_T1w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-oxfordFmrib09/anat/sub-oxfordFmrib09_space-other_T1w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-oxfordFmrib09/anat/sub-oxfordFmrib09_T1w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-oxfordFmrib09/anat/sub-oxfordFmrib09_space-other_T1w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-oxfordFmrib09/anat/sub-oxfordFmrib09_T1w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-oxfordFmrib09/anat/sub-oxfordFmrib09_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-oxfordFmrib09/anat/sub-oxfordFmrib09_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-oxfordFmrib09/anat/sub-oxfordFmrib09_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-oxfordFmrib09/anat/sub-oxfordFmrib09_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-oxfordFmrib09/anat/sub-oxfordFmrib09_T2star_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-oxfordFmrib09/anat/sub-oxfordFmrib09_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-oxfordFmrib09/anat/sub-oxfordFmrib09_T2star_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-oxfordFmrib09/anat/sub-oxfordFmrib09_space-other_T2w_label-discs_dlabel.json b/derivatives/labels/sub-oxfordFmrib09/anat/sub-oxfordFmrib09_T2w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-oxfordFmrib09/anat/sub-oxfordFmrib09_space-other_T2w_label-discs_dlabel.json rename to derivatives/labels/sub-oxfordFmrib09/anat/sub-oxfordFmrib09_T2w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-oxfordFmrib09/anat/sub-oxfordFmrib09_space-other_T2w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-oxfordFmrib09/anat/sub-oxfordFmrib09_T2w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-oxfordFmrib09/anat/sub-oxfordFmrib09_space-other_T2w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-oxfordFmrib09/anat/sub-oxfordFmrib09_T2w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-oxfordFmrib09/anat/sub-oxfordFmrib09_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-oxfordFmrib09/anat/sub-oxfordFmrib09_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-oxfordFmrib09/anat/sub-oxfordFmrib09_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-oxfordFmrib09/anat/sub-oxfordFmrib09_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-oxfordFmrib09/anat/sub-oxfordFmrib09_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-oxfordFmrib09/anat/sub-oxfordFmrib09_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-oxfordFmrib09/anat/sub-oxfordFmrib09_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-oxfordFmrib09/anat/sub-oxfordFmrib09_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-oxfordFmrib09/anat/sub-oxfordFmrib09_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-oxfordFmrib09/anat/sub-oxfordFmrib09_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-oxfordFmrib09/anat/sub-oxfordFmrib09_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-oxfordFmrib09/anat/sub-oxfordFmrib09_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-oxfordFmrib09/anat/sub-oxfordFmrib09_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-oxfordFmrib09/anat/sub-oxfordFmrib09_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-oxfordFmrib09/anat/sub-oxfordFmrib09_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-oxfordFmrib09/anat/sub-oxfordFmrib09_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-oxfordFmrib09/anat/sub-oxfordFmrib09_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-oxfordFmrib09/anat/sub-oxfordFmrib09_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-oxfordFmrib09/anat/sub-oxfordFmrib09_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-oxfordFmrib09/anat/sub-oxfordFmrib09_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-oxfordFmrib09/anat/sub-oxfordFmrib09_space-other_T2star_label-SC_seg.nii.gz b/derivatives/labels/sub-oxfordFmrib09/anat/sub-oxfordFmrib09_space-other_T2star_label-SC_seg.nii.gz index 05fa10043d..633ad6d28e 100644 --- a/derivatives/labels/sub-oxfordFmrib09/anat/sub-oxfordFmrib09_space-other_T2star_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-oxfordFmrib09/anat/sub-oxfordFmrib09_space-other_T2star_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s14835--56e7ef5ae604bf9318c60cf842b0cc46502ba2fde343384fec7b3190fbd880e8.nii.gz +/annex/objects/SHA256E-s14856--fc66013fb35446503dc3e154287f347347a215c135666cc5804899802f4c77b1.nii.gz diff --git a/derivatives/labels/sub-oxfordFmrib09/anat/sub-oxfordFmrib09_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-oxfordFmrib09/anat/sub-oxfordFmrib09_space-other_T2star_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-oxfordFmrib09/anat/sub-oxfordFmrib09_space-other_T2star_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-oxfordFmrib10/anat/sub-oxfordFmrib10_space-other_T1w_label-discs_dlabel.json b/derivatives/labels/sub-oxfordFmrib10/anat/sub-oxfordFmrib10_T1w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-oxfordFmrib10/anat/sub-oxfordFmrib10_space-other_T1w_label-discs_dlabel.json rename to derivatives/labels/sub-oxfordFmrib10/anat/sub-oxfordFmrib10_T1w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-oxfordFmrib10/anat/sub-oxfordFmrib10_space-other_T1w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-oxfordFmrib10/anat/sub-oxfordFmrib10_T1w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-oxfordFmrib10/anat/sub-oxfordFmrib10_space-other_T1w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-oxfordFmrib10/anat/sub-oxfordFmrib10_T1w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-oxfordFmrib10/anat/sub-oxfordFmrib10_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-oxfordFmrib10/anat/sub-oxfordFmrib10_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-oxfordFmrib10/anat/sub-oxfordFmrib10_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-oxfordFmrib10/anat/sub-oxfordFmrib10_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-oxfordFmrib10/anat/sub-oxfordFmrib10_T2star_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-oxfordFmrib10/anat/sub-oxfordFmrib10_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-oxfordFmrib10/anat/sub-oxfordFmrib10_T2star_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-oxfordFmrib10/anat/sub-oxfordFmrib10_space-other_T2w_label-discs_dlabel.json b/derivatives/labels/sub-oxfordFmrib10/anat/sub-oxfordFmrib10_T2w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-oxfordFmrib10/anat/sub-oxfordFmrib10_space-other_T2w_label-discs_dlabel.json rename to derivatives/labels/sub-oxfordFmrib10/anat/sub-oxfordFmrib10_T2w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-oxfordFmrib10/anat/sub-oxfordFmrib10_space-other_T2w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-oxfordFmrib10/anat/sub-oxfordFmrib10_T2w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-oxfordFmrib10/anat/sub-oxfordFmrib10_space-other_T2w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-oxfordFmrib10/anat/sub-oxfordFmrib10_T2w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-oxfordFmrib10/anat/sub-oxfordFmrib10_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-oxfordFmrib10/anat/sub-oxfordFmrib10_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-oxfordFmrib10/anat/sub-oxfordFmrib10_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-oxfordFmrib10/anat/sub-oxfordFmrib10_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-oxfordFmrib10/anat/sub-oxfordFmrib10_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-oxfordFmrib10/anat/sub-oxfordFmrib10_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-oxfordFmrib10/anat/sub-oxfordFmrib10_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-oxfordFmrib10/anat/sub-oxfordFmrib10_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-oxfordFmrib10/anat/sub-oxfordFmrib10_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-oxfordFmrib10/anat/sub-oxfordFmrib10_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-oxfordFmrib10/anat/sub-oxfordFmrib10_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-oxfordFmrib10/anat/sub-oxfordFmrib10_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-oxfordFmrib10/anat/sub-oxfordFmrib10_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-oxfordFmrib10/anat/sub-oxfordFmrib10_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-oxfordFmrib10/anat/sub-oxfordFmrib10_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-oxfordFmrib10/anat/sub-oxfordFmrib10_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-oxfordFmrib10/anat/sub-oxfordFmrib10_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-oxfordFmrib10/anat/sub-oxfordFmrib10_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-oxfordFmrib10/anat/sub-oxfordFmrib10_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-oxfordFmrib10/anat/sub-oxfordFmrib10_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-oxfordFmrib10/anat/sub-oxfordFmrib10_space-other_T2star_label-SC_seg.nii.gz b/derivatives/labels/sub-oxfordFmrib10/anat/sub-oxfordFmrib10_space-other_T2star_label-SC_seg.nii.gz index b6c5ee305f..9f6f08886f 100644 --- a/derivatives/labels/sub-oxfordFmrib10/anat/sub-oxfordFmrib10_space-other_T2star_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-oxfordFmrib10/anat/sub-oxfordFmrib10_space-other_T2star_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s14864--7b033063d52ac7eacc205d7809eed2d56df7794ed4beb222003a7d6fb900971b.nii.gz +/annex/objects/SHA256E-s14885--57ab808020b5a1b345d52f6835e5d74c51c76c255bba06c5b150f79a8e8d09e2.nii.gz diff --git a/derivatives/labels/sub-oxfordFmrib10/anat/sub-oxfordFmrib10_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-oxfordFmrib10/anat/sub-oxfordFmrib10_space-other_T2star_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-oxfordFmrib10/anat/sub-oxfordFmrib10_space-other_T2star_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-oxfordFmrib11/anat/sub-oxfordFmrib11_space-other_T1w_label-discs_dlabel.json b/derivatives/labels/sub-oxfordFmrib11/anat/sub-oxfordFmrib11_T1w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-oxfordFmrib11/anat/sub-oxfordFmrib11_space-other_T1w_label-discs_dlabel.json rename to derivatives/labels/sub-oxfordFmrib11/anat/sub-oxfordFmrib11_T1w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-oxfordFmrib11/anat/sub-oxfordFmrib11_space-other_T1w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-oxfordFmrib11/anat/sub-oxfordFmrib11_T1w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-oxfordFmrib11/anat/sub-oxfordFmrib11_space-other_T1w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-oxfordFmrib11/anat/sub-oxfordFmrib11_T1w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-oxfordFmrib11/anat/sub-oxfordFmrib11_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-oxfordFmrib11/anat/sub-oxfordFmrib11_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-oxfordFmrib11/anat/sub-oxfordFmrib11_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-oxfordFmrib11/anat/sub-oxfordFmrib11_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-oxfordFmrib11/anat/sub-oxfordFmrib11_T2star_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-oxfordFmrib11/anat/sub-oxfordFmrib11_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-oxfordFmrib11/anat/sub-oxfordFmrib11_T2star_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-oxfordFmrib11/anat/sub-oxfordFmrib11_space-other_T2w_label-discs_dlabel.json b/derivatives/labels/sub-oxfordFmrib11/anat/sub-oxfordFmrib11_T2w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-oxfordFmrib11/anat/sub-oxfordFmrib11_space-other_T2w_label-discs_dlabel.json rename to derivatives/labels/sub-oxfordFmrib11/anat/sub-oxfordFmrib11_T2w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-oxfordFmrib11/anat/sub-oxfordFmrib11_space-other_T2w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-oxfordFmrib11/anat/sub-oxfordFmrib11_T2w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-oxfordFmrib11/anat/sub-oxfordFmrib11_space-other_T2w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-oxfordFmrib11/anat/sub-oxfordFmrib11_T2w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-oxfordFmrib11/anat/sub-oxfordFmrib11_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-oxfordFmrib11/anat/sub-oxfordFmrib11_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-oxfordFmrib11/anat/sub-oxfordFmrib11_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-oxfordFmrib11/anat/sub-oxfordFmrib11_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-oxfordFmrib11/anat/sub-oxfordFmrib11_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-oxfordFmrib11/anat/sub-oxfordFmrib11_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-oxfordFmrib11/anat/sub-oxfordFmrib11_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-oxfordFmrib11/anat/sub-oxfordFmrib11_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-oxfordFmrib11/anat/sub-oxfordFmrib11_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-oxfordFmrib11/anat/sub-oxfordFmrib11_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-oxfordFmrib11/anat/sub-oxfordFmrib11_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-oxfordFmrib11/anat/sub-oxfordFmrib11_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-oxfordFmrib11/anat/sub-oxfordFmrib11_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-oxfordFmrib11/anat/sub-oxfordFmrib11_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-oxfordFmrib11/anat/sub-oxfordFmrib11_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-oxfordFmrib11/anat/sub-oxfordFmrib11_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-oxfordFmrib11/anat/sub-oxfordFmrib11_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-oxfordFmrib11/anat/sub-oxfordFmrib11_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-oxfordFmrib11/anat/sub-oxfordFmrib11_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-oxfordFmrib11/anat/sub-oxfordFmrib11_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-oxfordFmrib11/anat/sub-oxfordFmrib11_space-other_T2star_label-SC_seg.nii.gz b/derivatives/labels/sub-oxfordFmrib11/anat/sub-oxfordFmrib11_space-other_T2star_label-SC_seg.nii.gz index 26e786935d..949e8c2682 100644 --- a/derivatives/labels/sub-oxfordFmrib11/anat/sub-oxfordFmrib11_space-other_T2star_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-oxfordFmrib11/anat/sub-oxfordFmrib11_space-other_T2star_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s14927--337adb93c08023e95436606c0728b22aca1c2d0a0bf094b862efee61b5887dc2.nii.gz +/annex/objects/SHA256E-s14948--e79e590877bd8b5c064dd1c62288e464bd8e2c164ab6a49c8ca782c207eee10e.nii.gz diff --git a/derivatives/labels/sub-oxfordFmrib11/anat/sub-oxfordFmrib11_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-oxfordFmrib11/anat/sub-oxfordFmrib11_space-other_T2star_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-oxfordFmrib11/anat/sub-oxfordFmrib11_space-other_T2star_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-oxfordOhba01/anat/sub-oxfordOhba01_space-other_T1w_label-discs_dlabel.json b/derivatives/labels/sub-oxfordOhba01/anat/sub-oxfordOhba01_T1w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-oxfordOhba01/anat/sub-oxfordOhba01_space-other_T1w_label-discs_dlabel.json rename to derivatives/labels/sub-oxfordOhba01/anat/sub-oxfordOhba01_T1w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-oxfordOhba01/anat/sub-oxfordOhba01_space-other_T1w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-oxfordOhba01/anat/sub-oxfordOhba01_T1w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-oxfordOhba01/anat/sub-oxfordOhba01_space-other_T1w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-oxfordOhba01/anat/sub-oxfordOhba01_T1w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-oxfordOhba01/anat/sub-oxfordOhba01_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-oxfordOhba01/anat/sub-oxfordOhba01_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-oxfordOhba01/anat/sub-oxfordOhba01_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-oxfordOhba01/anat/sub-oxfordOhba01_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-oxfordOhba01/anat/sub-oxfordOhba01_T2star_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-oxfordOhba01/anat/sub-oxfordOhba01_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-oxfordOhba01/anat/sub-oxfordOhba01_T2star_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-oxfordOhba01/anat/sub-oxfordOhba01_space-other_T2w_label-discs_dlabel.json b/derivatives/labels/sub-oxfordOhba01/anat/sub-oxfordOhba01_T2w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-oxfordOhba01/anat/sub-oxfordOhba01_space-other_T2w_label-discs_dlabel.json rename to derivatives/labels/sub-oxfordOhba01/anat/sub-oxfordOhba01_T2w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-oxfordOhba01/anat/sub-oxfordOhba01_space-other_T2w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-oxfordOhba01/anat/sub-oxfordOhba01_T2w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-oxfordOhba01/anat/sub-oxfordOhba01_space-other_T2w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-oxfordOhba01/anat/sub-oxfordOhba01_T2w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-oxfordOhba01/anat/sub-oxfordOhba01_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-oxfordOhba01/anat/sub-oxfordOhba01_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-oxfordOhba01/anat/sub-oxfordOhba01_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-oxfordOhba01/anat/sub-oxfordOhba01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-oxfordOhba01/anat/sub-oxfordOhba01_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-oxfordOhba01/anat/sub-oxfordOhba01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-oxfordOhba01/anat/sub-oxfordOhba01_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-oxfordOhba01/anat/sub-oxfordOhba01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-oxfordOhba01/anat/sub-oxfordOhba01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-oxfordOhba01/anat/sub-oxfordOhba01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-oxfordOhba01/anat/sub-oxfordOhba01_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-oxfordOhba01/anat/sub-oxfordOhba01_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-oxfordOhba01/anat/sub-oxfordOhba01_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-oxfordOhba01/anat/sub-oxfordOhba01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-oxfordOhba01/anat/sub-oxfordOhba01_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-oxfordOhba01/anat/sub-oxfordOhba01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-oxfordOhba01/anat/sub-oxfordOhba01_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-oxfordOhba01/anat/sub-oxfordOhba01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-oxfordOhba01/anat/sub-oxfordOhba01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-oxfordOhba01/anat/sub-oxfordOhba01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-oxfordOhba01/anat/sub-oxfordOhba01_space-other_T2star_label-SC_seg.nii.gz b/derivatives/labels/sub-oxfordOhba01/anat/sub-oxfordOhba01_space-other_T2star_label-SC_seg.nii.gz index 2192a78125..a0ce232dde 100644 --- a/derivatives/labels/sub-oxfordOhba01/anat/sub-oxfordOhba01_space-other_T2star_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-oxfordOhba01/anat/sub-oxfordOhba01_space-other_T2star_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s14909--8de0dc0a965e1fbe7eee2b58644d9719a33d3e10c0a2309037c2f54c162fa909.nii.gz +/annex/objects/SHA256E-s14930--c305f9783f160ec77012aba1efcec3a1bf39cccf92e66a282455bcfe30394558.nii.gz diff --git a/derivatives/labels/sub-oxfordOhba01/anat/sub-oxfordOhba01_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-oxfordOhba01/anat/sub-oxfordOhba01_space-other_T2star_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-oxfordOhba01/anat/sub-oxfordOhba01_space-other_T2star_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-oxfordOhba02/anat/sub-oxfordOhba02_space-other_T1w_label-discs_dlabel.json b/derivatives/labels/sub-oxfordOhba02/anat/sub-oxfordOhba02_T1w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-oxfordOhba02/anat/sub-oxfordOhba02_space-other_T1w_label-discs_dlabel.json rename to derivatives/labels/sub-oxfordOhba02/anat/sub-oxfordOhba02_T1w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-oxfordOhba02/anat/sub-oxfordOhba02_space-other_T1w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-oxfordOhba02/anat/sub-oxfordOhba02_T1w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-oxfordOhba02/anat/sub-oxfordOhba02_space-other_T1w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-oxfordOhba02/anat/sub-oxfordOhba02_T1w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-oxfordOhba02/anat/sub-oxfordOhba02_space-other_T2w_label-discs_dlabel.json b/derivatives/labels/sub-oxfordOhba02/anat/sub-oxfordOhba02_T2w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-oxfordOhba02/anat/sub-oxfordOhba02_space-other_T2w_label-discs_dlabel.json rename to derivatives/labels/sub-oxfordOhba02/anat/sub-oxfordOhba02_T2w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-oxfordOhba02/anat/sub-oxfordOhba02_space-other_T2w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-oxfordOhba02/anat/sub-oxfordOhba02_T2w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-oxfordOhba02/anat/sub-oxfordOhba02_space-other_T2w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-oxfordOhba02/anat/sub-oxfordOhba02_T2w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-oxfordOhba02/anat/sub-oxfordOhba02_space-other_T2star_label-SC_seg.nii.gz b/derivatives/labels/sub-oxfordOhba02/anat/sub-oxfordOhba02_space-other_T2star_label-SC_seg.nii.gz index c35ff699e1..2ce6430b6d 100644 --- a/derivatives/labels/sub-oxfordOhba02/anat/sub-oxfordOhba02_space-other_T2star_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-oxfordOhba02/anat/sub-oxfordOhba02_space-other_T2star_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s14984--d6c98daa4b4aecd796e6a60c8766c8b63dcb8380333e2085df0a89dfc20d48f3.nii.gz +/annex/objects/SHA256E-s15005--b1bcc574263c0a67ede238ae4b8b31a25942ea9026ec585e312837af596e8866.nii.gz diff --git a/derivatives/labels/sub-oxfordOhba03/anat/sub-oxfordOhba03_space-other_T1w_label-discs_dlabel.json b/derivatives/labels/sub-oxfordOhba03/anat/sub-oxfordOhba03_T1w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-oxfordOhba03/anat/sub-oxfordOhba03_space-other_T1w_label-discs_dlabel.json rename to derivatives/labels/sub-oxfordOhba03/anat/sub-oxfordOhba03_T1w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-oxfordOhba03/anat/sub-oxfordOhba03_space-other_T1w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-oxfordOhba03/anat/sub-oxfordOhba03_T1w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-oxfordOhba03/anat/sub-oxfordOhba03_space-other_T1w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-oxfordOhba03/anat/sub-oxfordOhba03_T1w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-oxfordOhba03/anat/sub-oxfordOhba03_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-oxfordOhba03/anat/sub-oxfordOhba03_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-oxfordOhba03/anat/sub-oxfordOhba03_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-oxfordOhba03/anat/sub-oxfordOhba03_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-oxfordOhba03/anat/sub-oxfordOhba03_T2star_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-oxfordOhba03/anat/sub-oxfordOhba03_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-oxfordOhba03/anat/sub-oxfordOhba03_T2star_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-oxfordOhba03/anat/sub-oxfordOhba03_space-other_T2w_label-discs_dlabel.json b/derivatives/labels/sub-oxfordOhba03/anat/sub-oxfordOhba03_T2w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-oxfordOhba03/anat/sub-oxfordOhba03_space-other_T2w_label-discs_dlabel.json rename to derivatives/labels/sub-oxfordOhba03/anat/sub-oxfordOhba03_T2w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-oxfordOhba03/anat/sub-oxfordOhba03_space-other_T2w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-oxfordOhba03/anat/sub-oxfordOhba03_T2w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-oxfordOhba03/anat/sub-oxfordOhba03_space-other_T2w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-oxfordOhba03/anat/sub-oxfordOhba03_T2w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-oxfordOhba03/anat/sub-oxfordOhba03_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-oxfordOhba03/anat/sub-oxfordOhba03_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-oxfordOhba03/anat/sub-oxfordOhba03_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-oxfordOhba03/anat/sub-oxfordOhba03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-oxfordOhba03/anat/sub-oxfordOhba03_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-oxfordOhba03/anat/sub-oxfordOhba03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-oxfordOhba03/anat/sub-oxfordOhba03_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-oxfordOhba03/anat/sub-oxfordOhba03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-oxfordOhba03/anat/sub-oxfordOhba03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-oxfordOhba03/anat/sub-oxfordOhba03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-oxfordOhba03/anat/sub-oxfordOhba03_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-oxfordOhba03/anat/sub-oxfordOhba03_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-oxfordOhba03/anat/sub-oxfordOhba03_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-oxfordOhba03/anat/sub-oxfordOhba03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-oxfordOhba03/anat/sub-oxfordOhba03_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-oxfordOhba03/anat/sub-oxfordOhba03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-oxfordOhba03/anat/sub-oxfordOhba03_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-oxfordOhba03/anat/sub-oxfordOhba03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-oxfordOhba03/anat/sub-oxfordOhba03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-oxfordOhba03/anat/sub-oxfordOhba03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-oxfordOhba03/anat/sub-oxfordOhba03_space-other_T2star_label-SC_seg.nii.gz b/derivatives/labels/sub-oxfordOhba03/anat/sub-oxfordOhba03_space-other_T2star_label-SC_seg.nii.gz index 6ff68f65dc..fae58bfcc1 100644 --- a/derivatives/labels/sub-oxfordOhba03/anat/sub-oxfordOhba03_space-other_T2star_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-oxfordOhba03/anat/sub-oxfordOhba03_space-other_T2star_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s14845--606c18a43d16c00bb3a41918cd7b259e32cfd575b197e903903e475bb1346ff9.nii.gz +/annex/objects/SHA256E-s14866--bcf274eda5e6df184f56b7dff08a0e4c1b805a236daffa6a2e6378ef168454e6.nii.gz diff --git a/derivatives/labels/sub-oxfordOhba03/anat/sub-oxfordOhba03_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-oxfordOhba03/anat/sub-oxfordOhba03_space-other_T2star_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-oxfordOhba03/anat/sub-oxfordOhba03_space-other_T2star_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-oxfordOhba04/anat/sub-oxfordOhba04_space-other_T1w_label-discs_dlabel.json b/derivatives/labels/sub-oxfordOhba04/anat/sub-oxfordOhba04_T1w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-oxfordOhba04/anat/sub-oxfordOhba04_space-other_T1w_label-discs_dlabel.json rename to derivatives/labels/sub-oxfordOhba04/anat/sub-oxfordOhba04_T1w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-oxfordOhba04/anat/sub-oxfordOhba04_space-other_T1w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-oxfordOhba04/anat/sub-oxfordOhba04_T1w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-oxfordOhba04/anat/sub-oxfordOhba04_space-other_T1w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-oxfordOhba04/anat/sub-oxfordOhba04_T1w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-oxfordOhba04/anat/sub-oxfordOhba04_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-oxfordOhba04/anat/sub-oxfordOhba04_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-oxfordOhba04/anat/sub-oxfordOhba04_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-oxfordOhba04/anat/sub-oxfordOhba04_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-oxfordOhba04/anat/sub-oxfordOhba04_T2star_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-oxfordOhba04/anat/sub-oxfordOhba04_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-oxfordOhba04/anat/sub-oxfordOhba04_T2star_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-oxfordOhba04/anat/sub-oxfordOhba04_space-other_T2w_label-discs_dlabel.json b/derivatives/labels/sub-oxfordOhba04/anat/sub-oxfordOhba04_T2w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-oxfordOhba04/anat/sub-oxfordOhba04_space-other_T2w_label-discs_dlabel.json rename to derivatives/labels/sub-oxfordOhba04/anat/sub-oxfordOhba04_T2w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-oxfordOhba04/anat/sub-oxfordOhba04_space-other_T2w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-oxfordOhba04/anat/sub-oxfordOhba04_T2w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-oxfordOhba04/anat/sub-oxfordOhba04_space-other_T2w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-oxfordOhba04/anat/sub-oxfordOhba04_T2w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-oxfordOhba04/anat/sub-oxfordOhba04_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-oxfordOhba04/anat/sub-oxfordOhba04_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-oxfordOhba04/anat/sub-oxfordOhba04_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-oxfordOhba04/anat/sub-oxfordOhba04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-oxfordOhba04/anat/sub-oxfordOhba04_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-oxfordOhba04/anat/sub-oxfordOhba04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-oxfordOhba04/anat/sub-oxfordOhba04_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-oxfordOhba04/anat/sub-oxfordOhba04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-oxfordOhba04/anat/sub-oxfordOhba04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-oxfordOhba04/anat/sub-oxfordOhba04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-oxfordOhba04/anat/sub-oxfordOhba04_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-oxfordOhba04/anat/sub-oxfordOhba04_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-oxfordOhba04/anat/sub-oxfordOhba04_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-oxfordOhba04/anat/sub-oxfordOhba04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-oxfordOhba04/anat/sub-oxfordOhba04_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-oxfordOhba04/anat/sub-oxfordOhba04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-oxfordOhba04/anat/sub-oxfordOhba04_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-oxfordOhba04/anat/sub-oxfordOhba04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-oxfordOhba04/anat/sub-oxfordOhba04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-oxfordOhba04/anat/sub-oxfordOhba04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-oxfordOhba04/anat/sub-oxfordOhba04_space-other_T2star_label-SC_seg.nii.gz b/derivatives/labels/sub-oxfordOhba04/anat/sub-oxfordOhba04_space-other_T2star_label-SC_seg.nii.gz index cc99cbf77f..1a2e023b4a 100644 --- a/derivatives/labels/sub-oxfordOhba04/anat/sub-oxfordOhba04_space-other_T2star_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-oxfordOhba04/anat/sub-oxfordOhba04_space-other_T2star_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s14780--bb3c604d2a4f776e5620a1deb26513f11ce9b0066beffaafeec2cf3f1a3f067e.nii.gz +/annex/objects/SHA256E-s14801--475564d1883c6c032894dcee5f3a449c2fcb7ccdc11d8ba13150b3d3abdaf570.nii.gz diff --git a/derivatives/labels/sub-oxfordOhba04/anat/sub-oxfordOhba04_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-oxfordOhba04/anat/sub-oxfordOhba04_space-other_T2star_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-oxfordOhba04/anat/sub-oxfordOhba04_space-other_T2star_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-oxfordOhba05/anat/sub-oxfordOhba05_space-other_T1w_label-discs_dlabel.json b/derivatives/labels/sub-oxfordOhba05/anat/sub-oxfordOhba05_T1w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-oxfordOhba05/anat/sub-oxfordOhba05_space-other_T1w_label-discs_dlabel.json rename to derivatives/labels/sub-oxfordOhba05/anat/sub-oxfordOhba05_T1w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-oxfordOhba05/anat/sub-oxfordOhba05_space-other_T1w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-oxfordOhba05/anat/sub-oxfordOhba05_T1w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-oxfordOhba05/anat/sub-oxfordOhba05_space-other_T1w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-oxfordOhba05/anat/sub-oxfordOhba05_T1w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-oxfordOhba05/anat/sub-oxfordOhba05_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-oxfordOhba05/anat/sub-oxfordOhba05_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-oxfordOhba05/anat/sub-oxfordOhba05_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-oxfordOhba05/anat/sub-oxfordOhba05_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-oxfordOhba05/anat/sub-oxfordOhba05_T2star_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-oxfordOhba05/anat/sub-oxfordOhba05_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-oxfordOhba05/anat/sub-oxfordOhba05_T2star_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-oxfordOhba05/anat/sub-oxfordOhba05_space-other_T2w_label-discs_dlabel.json b/derivatives/labels/sub-oxfordOhba05/anat/sub-oxfordOhba05_T2w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-oxfordOhba05/anat/sub-oxfordOhba05_space-other_T2w_label-discs_dlabel.json rename to derivatives/labels/sub-oxfordOhba05/anat/sub-oxfordOhba05_T2w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-oxfordOhba05/anat/sub-oxfordOhba05_space-other_T2w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-oxfordOhba05/anat/sub-oxfordOhba05_T2w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-oxfordOhba05/anat/sub-oxfordOhba05_space-other_T2w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-oxfordOhba05/anat/sub-oxfordOhba05_T2w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-oxfordOhba05/anat/sub-oxfordOhba05_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-oxfordOhba05/anat/sub-oxfordOhba05_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-oxfordOhba05/anat/sub-oxfordOhba05_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-oxfordOhba05/anat/sub-oxfordOhba05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-oxfordOhba05/anat/sub-oxfordOhba05_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-oxfordOhba05/anat/sub-oxfordOhba05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-oxfordOhba05/anat/sub-oxfordOhba05_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-oxfordOhba05/anat/sub-oxfordOhba05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-oxfordOhba05/anat/sub-oxfordOhba05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-oxfordOhba05/anat/sub-oxfordOhba05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-oxfordOhba05/anat/sub-oxfordOhba05_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-oxfordOhba05/anat/sub-oxfordOhba05_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-oxfordOhba05/anat/sub-oxfordOhba05_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-oxfordOhba05/anat/sub-oxfordOhba05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-oxfordOhba05/anat/sub-oxfordOhba05_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-oxfordOhba05/anat/sub-oxfordOhba05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-oxfordOhba05/anat/sub-oxfordOhba05_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-oxfordOhba05/anat/sub-oxfordOhba05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-oxfordOhba05/anat/sub-oxfordOhba05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-oxfordOhba05/anat/sub-oxfordOhba05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-oxfordOhba05/anat/sub-oxfordOhba05_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.json b/derivatives/labels/sub-oxfordOhba05/anat/sub-oxfordOhba05_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.json new file mode 100644 index 0000000000..e537a137e5 --- /dev/null +++ b/derivatives/labels/sub-oxfordOhba05/anat/sub-oxfordOhba05_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.json @@ -0,0 +1,11 @@ +{ + "SpatialReference": { + "Orientation": "RPI", + "Resampling": "1x1x1" + }, + "GeneratedBy": [ + { + "Description": "Manual label of C2 and C5 mid-vertebrae, at the center of the spinal cord." + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-oxfordOhba05/anat/sub-oxfordOhba05_space-other_T1w_RPI_r_labels-manual.nii.gz b/derivatives/labels/sub-oxfordOhba05/anat/sub-oxfordOhba05_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-oxfordOhba05/anat/sub-oxfordOhba05_space-other_T1w_RPI_r_labels-manual.nii.gz rename to derivatives/labels/sub-oxfordOhba05/anat/sub-oxfordOhba05_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.nii.gz diff --git a/derivatives/labels/sub-oxfordOhba05/anat/sub-oxfordOhba05_space-other_T2star_label-SC_seg.nii.gz b/derivatives/labels/sub-oxfordOhba05/anat/sub-oxfordOhba05_space-other_T2star_label-SC_seg.nii.gz index ff3678b754..0d311d582e 100644 --- a/derivatives/labels/sub-oxfordOhba05/anat/sub-oxfordOhba05_space-other_T2star_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-oxfordOhba05/anat/sub-oxfordOhba05_space-other_T2star_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s15014--acbe9df5cb04fa2db04a690951f3a512ebccb0018667668e4086e9731ac1896e.nii.gz +/annex/objects/SHA256E-s15035--94a6b56a2f55ef24126999532b3834b2979c094fd59a37d9e3d8f59e57e74b09.nii.gz diff --git a/derivatives/labels/sub-oxfordOhba05/anat/sub-oxfordOhba05_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-oxfordOhba05/anat/sub-oxfordOhba05_space-other_T2star_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-oxfordOhba05/anat/sub-oxfordOhba05_space-other_T2star_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-pavia01/anat/sub-pavia01_space-other_T1w_label-discs_dlabel.json b/derivatives/labels/sub-pavia01/anat/sub-pavia01_T1w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-pavia01/anat/sub-pavia01_space-other_T1w_label-discs_dlabel.json rename to derivatives/labels/sub-pavia01/anat/sub-pavia01_T1w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-pavia01/anat/sub-pavia01_space-other_T1w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-pavia01/anat/sub-pavia01_T1w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-pavia01/anat/sub-pavia01_space-other_T1w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-pavia01/anat/sub-pavia01_T1w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-pavia01/anat/sub-pavia01_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-pavia01/anat/sub-pavia01_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-pavia01/anat/sub-pavia01_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-pavia01/anat/sub-pavia01_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-pavia01/anat/sub-pavia01_T2star_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-pavia01/anat/sub-pavia01_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-pavia01/anat/sub-pavia01_T2star_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-pavia01/anat/sub-pavia01_space-other_T2w_label-discs_dlabel.json b/derivatives/labels/sub-pavia01/anat/sub-pavia01_T2w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-pavia01/anat/sub-pavia01_space-other_T2w_label-discs_dlabel.json rename to derivatives/labels/sub-pavia01/anat/sub-pavia01_T2w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-pavia01/anat/sub-pavia01_space-other_T2w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-pavia01/anat/sub-pavia01_T2w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-pavia01/anat/sub-pavia01_space-other_T2w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-pavia01/anat/sub-pavia01_T2w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-pavia01/anat/sub-pavia01_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-pavia01/anat/sub-pavia01_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-pavia01/anat/sub-pavia01_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-pavia01/anat/sub-pavia01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-pavia01/anat/sub-pavia01_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-pavia01/anat/sub-pavia01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-pavia01/anat/sub-pavia01_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-pavia01/anat/sub-pavia01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-pavia01/anat/sub-pavia01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-pavia01/anat/sub-pavia01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-pavia01/anat/sub-pavia01_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-pavia01/anat/sub-pavia01_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-pavia01/anat/sub-pavia01_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-pavia01/anat/sub-pavia01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-pavia01/anat/sub-pavia01_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-pavia01/anat/sub-pavia01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-pavia01/anat/sub-pavia01_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-pavia01/anat/sub-pavia01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-pavia01/anat/sub-pavia01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-pavia01/anat/sub-pavia01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-pavia01/anat/sub-pavia01_space-other_T2star_label-SC_seg.nii.gz b/derivatives/labels/sub-pavia01/anat/sub-pavia01_space-other_T2star_label-SC_seg.nii.gz index 4f9da8cc97..9b157e81d3 100644 --- a/derivatives/labels/sub-pavia01/anat/sub-pavia01_space-other_T2star_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-pavia01/anat/sub-pavia01_space-other_T2star_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s14857--63c6fee423ee41e71c4835c7c6e4b1e280b71ef3558244ab9544197234758c94.nii.gz +/annex/objects/SHA256E-s14878--2df73c271710ad7c750077d41529f18c7bf3ab588daa68e3e816430708b330fb.nii.gz diff --git a/derivatives/labels/sub-pavia01/anat/sub-pavia01_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-pavia01/anat/sub-pavia01_space-other_T2star_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-pavia01/anat/sub-pavia01_space-other_T2star_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-pavia02/anat/sub-pavia02_space-other_T1w_label-discs_dlabel.json b/derivatives/labels/sub-pavia02/anat/sub-pavia02_T1w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-pavia02/anat/sub-pavia02_space-other_T1w_label-discs_dlabel.json rename to derivatives/labels/sub-pavia02/anat/sub-pavia02_T1w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-pavia02/anat/sub-pavia02_space-other_T1w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-pavia02/anat/sub-pavia02_T1w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-pavia02/anat/sub-pavia02_space-other_T1w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-pavia02/anat/sub-pavia02_T1w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-pavia02/anat/sub-pavia02_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-pavia02/anat/sub-pavia02_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-pavia02/anat/sub-pavia02_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-pavia02/anat/sub-pavia02_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-pavia02/anat/sub-pavia02_T2star_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-pavia02/anat/sub-pavia02_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-pavia02/anat/sub-pavia02_T2star_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-pavia02/anat/sub-pavia02_space-other_T2w_label-discs_dlabel.json b/derivatives/labels/sub-pavia02/anat/sub-pavia02_T2w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-pavia02/anat/sub-pavia02_space-other_T2w_label-discs_dlabel.json rename to derivatives/labels/sub-pavia02/anat/sub-pavia02_T2w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-pavia02/anat/sub-pavia02_space-other_T2w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-pavia02/anat/sub-pavia02_T2w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-pavia02/anat/sub-pavia02_space-other_T2w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-pavia02/anat/sub-pavia02_T2w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-pavia02/anat/sub-pavia02_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-pavia02/anat/sub-pavia02_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-pavia02/anat/sub-pavia02_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-pavia02/anat/sub-pavia02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-pavia02/anat/sub-pavia02_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-pavia02/anat/sub-pavia02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-pavia02/anat/sub-pavia02_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-pavia02/anat/sub-pavia02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-pavia02/anat/sub-pavia02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-pavia02/anat/sub-pavia02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-pavia02/anat/sub-pavia02_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-pavia02/anat/sub-pavia02_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-pavia02/anat/sub-pavia02_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-pavia02/anat/sub-pavia02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-pavia02/anat/sub-pavia02_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-pavia02/anat/sub-pavia02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-pavia02/anat/sub-pavia02_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-pavia02/anat/sub-pavia02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-pavia02/anat/sub-pavia02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-pavia02/anat/sub-pavia02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-pavia02/anat/sub-pavia02_space-other_T2star_label-SC_seg.nii.gz b/derivatives/labels/sub-pavia02/anat/sub-pavia02_space-other_T2star_label-SC_seg.nii.gz index adf97d458e..f9273254fe 100644 --- a/derivatives/labels/sub-pavia02/anat/sub-pavia02_space-other_T2star_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-pavia02/anat/sub-pavia02_space-other_T2star_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s14857--280d4f01945c9bc1cc9178f695f38af284a5299d19dba8b043dc274a0def27f7.nii.gz +/annex/objects/SHA256E-s14878--c5c48ff34a1afe579294a59f535d054a6b103b28d9005c1b09f1aa7887a55835.nii.gz diff --git a/derivatives/labels/sub-pavia02/anat/sub-pavia02_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-pavia02/anat/sub-pavia02_space-other_T2star_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-pavia02/anat/sub-pavia02_space-other_T2star_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-pavia03/anat/sub-pavia03_space-other_T1w_label-discs_dlabel.json b/derivatives/labels/sub-pavia03/anat/sub-pavia03_T1w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-pavia03/anat/sub-pavia03_space-other_T1w_label-discs_dlabel.json rename to derivatives/labels/sub-pavia03/anat/sub-pavia03_T1w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-pavia03/anat/sub-pavia03_space-other_T1w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-pavia03/anat/sub-pavia03_T1w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-pavia03/anat/sub-pavia03_space-other_T1w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-pavia03/anat/sub-pavia03_T1w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-pavia03/anat/sub-pavia03_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-pavia03/anat/sub-pavia03_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-pavia03/anat/sub-pavia03_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-pavia03/anat/sub-pavia03_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-pavia03/anat/sub-pavia03_T2star_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-pavia03/anat/sub-pavia03_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-pavia03/anat/sub-pavia03_T2star_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-pavia03/anat/sub-pavia03_space-other_T2w_label-discs_dlabel.json b/derivatives/labels/sub-pavia03/anat/sub-pavia03_T2w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-pavia03/anat/sub-pavia03_space-other_T2w_label-discs_dlabel.json rename to derivatives/labels/sub-pavia03/anat/sub-pavia03_T2w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-pavia03/anat/sub-pavia03_space-other_T2w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-pavia03/anat/sub-pavia03_T2w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-pavia03/anat/sub-pavia03_space-other_T2w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-pavia03/anat/sub-pavia03_T2w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-pavia03/anat/sub-pavia03_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-pavia03/anat/sub-pavia03_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-pavia03/anat/sub-pavia03_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-pavia03/anat/sub-pavia03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-pavia03/anat/sub-pavia03_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-pavia03/anat/sub-pavia03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-pavia03/anat/sub-pavia03_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-pavia03/anat/sub-pavia03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-pavia03/anat/sub-pavia03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-pavia03/anat/sub-pavia03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-pavia03/anat/sub-pavia03_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-pavia03/anat/sub-pavia03_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-pavia03/anat/sub-pavia03_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-pavia03/anat/sub-pavia03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-pavia03/anat/sub-pavia03_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-pavia03/anat/sub-pavia03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-pavia03/anat/sub-pavia03_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-pavia03/anat/sub-pavia03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-pavia03/anat/sub-pavia03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-pavia03/anat/sub-pavia03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-pavia03/anat/sub-pavia03_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.json b/derivatives/labels/sub-pavia03/anat/sub-pavia03_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.json new file mode 100644 index 0000000000..e537a137e5 --- /dev/null +++ b/derivatives/labels/sub-pavia03/anat/sub-pavia03_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.json @@ -0,0 +1,11 @@ +{ + "SpatialReference": { + "Orientation": "RPI", + "Resampling": "1x1x1" + }, + "GeneratedBy": [ + { + "Description": "Manual label of C2 and C5 mid-vertebrae, at the center of the spinal cord." + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-pavia03/anat/sub-pavia03_space-other_T1w_RPI_r_labels-manual.nii.gz b/derivatives/labels/sub-pavia03/anat/sub-pavia03_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-pavia03/anat/sub-pavia03_space-other_T1w_RPI_r_labels-manual.nii.gz rename to derivatives/labels/sub-pavia03/anat/sub-pavia03_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.nii.gz diff --git a/derivatives/labels/sub-pavia03/anat/sub-pavia03_space-other_T2star_label-SC_seg.nii.gz b/derivatives/labels/sub-pavia03/anat/sub-pavia03_space-other_T2star_label-SC_seg.nii.gz index 84096359ad..536a4764c5 100644 --- a/derivatives/labels/sub-pavia03/anat/sub-pavia03_space-other_T2star_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-pavia03/anat/sub-pavia03_space-other_T2star_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s15008--4fd21f1d4fbe483660fc559bfa84c341dc34a574d5a8e00215484cb3e4d16fc6.nii.gz +/annex/objects/SHA256E-s15029--243d3857eae8966beb90ae80b164d5e22eb128c839ba66fc382585a4a6a5081a.nii.gz diff --git a/derivatives/labels/sub-pavia03/anat/sub-pavia03_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-pavia03/anat/sub-pavia03_space-other_T2star_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-pavia03/anat/sub-pavia03_space-other_T2star_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-pavia04/anat/sub-pavia04_space-other_T1w_label-discs_dlabel.json b/derivatives/labels/sub-pavia04/anat/sub-pavia04_T1w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-pavia04/anat/sub-pavia04_space-other_T1w_label-discs_dlabel.json rename to derivatives/labels/sub-pavia04/anat/sub-pavia04_T1w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-pavia04/anat/sub-pavia04_space-other_T1w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-pavia04/anat/sub-pavia04_T1w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-pavia04/anat/sub-pavia04_space-other_T1w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-pavia04/anat/sub-pavia04_T1w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-pavia04/anat/sub-pavia04_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-pavia04/anat/sub-pavia04_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-pavia04/anat/sub-pavia04_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-pavia04/anat/sub-pavia04_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-pavia04/anat/sub-pavia04_T2star_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-pavia04/anat/sub-pavia04_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-pavia04/anat/sub-pavia04_T2star_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-pavia04/anat/sub-pavia04_space-other_T2w_label-discs_dlabel.json b/derivatives/labels/sub-pavia04/anat/sub-pavia04_T2w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-pavia04/anat/sub-pavia04_space-other_T2w_label-discs_dlabel.json rename to derivatives/labels/sub-pavia04/anat/sub-pavia04_T2w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-pavia04/anat/sub-pavia04_space-other_T2w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-pavia04/anat/sub-pavia04_T2w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-pavia04/anat/sub-pavia04_space-other_T2w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-pavia04/anat/sub-pavia04_T2w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-pavia04/anat/sub-pavia04_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-pavia04/anat/sub-pavia04_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-pavia04/anat/sub-pavia04_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-pavia04/anat/sub-pavia04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-pavia04/anat/sub-pavia04_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-pavia04/anat/sub-pavia04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-pavia04/anat/sub-pavia04_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-pavia04/anat/sub-pavia04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-pavia04/anat/sub-pavia04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-pavia04/anat/sub-pavia04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-pavia04/anat/sub-pavia04_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-pavia04/anat/sub-pavia04_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-pavia04/anat/sub-pavia04_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-pavia04/anat/sub-pavia04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-pavia04/anat/sub-pavia04_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-pavia04/anat/sub-pavia04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-pavia04/anat/sub-pavia04_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-pavia04/anat/sub-pavia04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-pavia04/anat/sub-pavia04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-pavia04/anat/sub-pavia04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-pavia04/anat/sub-pavia04_space-other_T2star_label-SC_seg.nii.gz b/derivatives/labels/sub-pavia04/anat/sub-pavia04_space-other_T2star_label-SC_seg.nii.gz index cec3b72062..9630ed0a57 100644 --- a/derivatives/labels/sub-pavia04/anat/sub-pavia04_space-other_T2star_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-pavia04/anat/sub-pavia04_space-other_T2star_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s6744--d5d946ed61f086272ec496aca64b386d0f1d0624bf9f23789b5e618204323486.nii.gz +/annex/objects/SHA256E-s28204--4a997f46dfa34d978727be669fdbfe10aae4f746d80885d98456a17893177094.nii.gz diff --git a/derivatives/labels/sub-pavia04/anat/sub-pavia04_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-pavia04/anat/sub-pavia04_space-other_T2star_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-pavia04/anat/sub-pavia04_space-other_T2star_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-pavia04/anat/sub-pavia04_space-other_T2w_csflabel-SC_seg.json b/derivatives/labels/sub-pavia04/anat/sub-pavia04_space-other_T2w_label-CSF_seg.json similarity index 100% rename from derivatives/labels/sub-pavia04/anat/sub-pavia04_space-other_T2w_csflabel-SC_seg.json rename to derivatives/labels/sub-pavia04/anat/sub-pavia04_space-other_T2w_label-CSF_seg.json diff --git a/derivatives/labels/sub-pavia04/anat/sub-pavia04_space-other_T2w_csflabel-SC_seg.nii.gz b/derivatives/labels/sub-pavia04/anat/sub-pavia04_space-other_T2w_label-CSF_seg.nii.gz similarity index 100% rename from derivatives/labels/sub-pavia04/anat/sub-pavia04_space-other_T2w_csflabel-SC_seg.nii.gz rename to derivatives/labels/sub-pavia04/anat/sub-pavia04_space-other_T2w_label-CSF_seg.nii.gz diff --git a/derivatives/labels/sub-pavia04/anat/sub-pavia04_space-other_T2w_label-canal_seg.json b/derivatives/labels/sub-pavia04/anat/sub-pavia04_space-other_T2w_label-canal_seg.json new file mode 100644 index 0000000000..9b765ae333 --- /dev/null +++ b/derivatives/labels/sub-pavia04/anat/sub-pavia04_space-other_T2w_label-canal_seg.json @@ -0,0 +1,11 @@ +{ + "SpatialReference": { + "Orientation": "RPI", + "Resampling": "0.8x0.8x0.8" + }, + "GeneratedBy": [ + { + "Description": "Created from label-CSF_seg" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-pavia04/anat/sub-pavia04_space-other_T2w_label-canal_seg.nii.gz b/derivatives/labels/sub-pavia04/anat/sub-pavia04_space-other_T2w_label-canal_seg.nii.gz new file mode 100644 index 0000000000..0919e4a3ca --- /dev/null +++ b/derivatives/labels/sub-pavia04/anat/sub-pavia04_space-other_T2w_label-canal_seg.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s137043--f93223f9514b713194df03df99aec8a7e0e7e9f9c1eec11fb3f99b748192a83f.nii.gz diff --git a/derivatives/labels/sub-pavia05/anat/sub-pavia05_space-other_T1w_label-discs_dlabel.json b/derivatives/labels/sub-pavia05/anat/sub-pavia05_T1w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-pavia05/anat/sub-pavia05_space-other_T1w_label-discs_dlabel.json rename to derivatives/labels/sub-pavia05/anat/sub-pavia05_T1w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-pavia05/anat/sub-pavia05_space-other_T1w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-pavia05/anat/sub-pavia05_T1w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-pavia05/anat/sub-pavia05_space-other_T1w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-pavia05/anat/sub-pavia05_T1w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-pavia05/anat/sub-pavia05_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-pavia05/anat/sub-pavia05_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-pavia05/anat/sub-pavia05_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-pavia05/anat/sub-pavia05_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-pavia05/anat/sub-pavia05_T2star_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-pavia05/anat/sub-pavia05_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-pavia05/anat/sub-pavia05_T2star_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-pavia05/anat/sub-pavia05_space-other_T2w_label-discs_dlabel.json b/derivatives/labels/sub-pavia05/anat/sub-pavia05_T2w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-pavia05/anat/sub-pavia05_space-other_T2w_label-discs_dlabel.json rename to derivatives/labels/sub-pavia05/anat/sub-pavia05_T2w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-pavia05/anat/sub-pavia05_space-other_T2w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-pavia05/anat/sub-pavia05_T2w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-pavia05/anat/sub-pavia05_space-other_T2w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-pavia05/anat/sub-pavia05_T2w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-pavia05/anat/sub-pavia05_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-pavia05/anat/sub-pavia05_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-pavia05/anat/sub-pavia05_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-pavia05/anat/sub-pavia05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-pavia05/anat/sub-pavia05_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-pavia05/anat/sub-pavia05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-pavia05/anat/sub-pavia05_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-pavia05/anat/sub-pavia05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-pavia05/anat/sub-pavia05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-pavia05/anat/sub-pavia05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-pavia05/anat/sub-pavia05_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-pavia05/anat/sub-pavia05_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-pavia05/anat/sub-pavia05_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-pavia05/anat/sub-pavia05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-pavia05/anat/sub-pavia05_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-pavia05/anat/sub-pavia05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-pavia05/anat/sub-pavia05_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-pavia05/anat/sub-pavia05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-pavia05/anat/sub-pavia05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-pavia05/anat/sub-pavia05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-pavia05/anat/sub-pavia05_space-other_T2star_label-SC_seg.nii.gz b/derivatives/labels/sub-pavia05/anat/sub-pavia05_space-other_T2star_label-SC_seg.nii.gz index 258d61dbc5..f13673b8a8 100644 --- a/derivatives/labels/sub-pavia05/anat/sub-pavia05_space-other_T2star_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-pavia05/anat/sub-pavia05_space-other_T2star_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s14976--eb7ec8ef8e28a2d6fd8c5ff79637f7a26802980e5bd8169f8d14f8eabd6d9ac8.nii.gz +/annex/objects/SHA256E-s14997--88157d3484bae0db86071fbd49f3a4e00fa6f427501b9404ce853924c1e8a0f8.nii.gz diff --git a/derivatives/labels/sub-pavia05/anat/sub-pavia05_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-pavia05/anat/sub-pavia05_space-other_T2star_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-pavia05/anat/sub-pavia05_space-other_T2star_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-pavia06/anat/sub-pavia06_space-other_T1w_label-discs_dlabel.json b/derivatives/labels/sub-pavia06/anat/sub-pavia06_T1w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-pavia06/anat/sub-pavia06_space-other_T1w_label-discs_dlabel.json rename to derivatives/labels/sub-pavia06/anat/sub-pavia06_T1w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-pavia06/anat/sub-pavia06_space-other_T1w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-pavia06/anat/sub-pavia06_T1w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-pavia06/anat/sub-pavia06_space-other_T1w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-pavia06/anat/sub-pavia06_T1w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-pavia06/anat/sub-pavia06_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-pavia06/anat/sub-pavia06_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-pavia06/anat/sub-pavia06_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-pavia06/anat/sub-pavia06_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-pavia06/anat/sub-pavia06_T2star_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-pavia06/anat/sub-pavia06_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-pavia06/anat/sub-pavia06_T2star_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-pavia06/anat/sub-pavia06_space-other_T2w_label-discs_dlabel.json b/derivatives/labels/sub-pavia06/anat/sub-pavia06_T2w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-pavia06/anat/sub-pavia06_space-other_T2w_label-discs_dlabel.json rename to derivatives/labels/sub-pavia06/anat/sub-pavia06_T2w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-pavia06/anat/sub-pavia06_space-other_T2w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-pavia06/anat/sub-pavia06_T2w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-pavia06/anat/sub-pavia06_space-other_T2w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-pavia06/anat/sub-pavia06_T2w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-pavia06/anat/sub-pavia06_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-pavia06/anat/sub-pavia06_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-pavia06/anat/sub-pavia06_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-pavia06/anat/sub-pavia06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-pavia06/anat/sub-pavia06_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-pavia06/anat/sub-pavia06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-pavia06/anat/sub-pavia06_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-pavia06/anat/sub-pavia06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-pavia06/anat/sub-pavia06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-pavia06/anat/sub-pavia06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-pavia06/anat/sub-pavia06_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-pavia06/anat/sub-pavia06_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-pavia06/anat/sub-pavia06_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-pavia06/anat/sub-pavia06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-pavia06/anat/sub-pavia06_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-pavia06/anat/sub-pavia06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-pavia06/anat/sub-pavia06_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-pavia06/anat/sub-pavia06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-pavia06/anat/sub-pavia06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-pavia06/anat/sub-pavia06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-pavia06/anat/sub-pavia06_space-other_T2star_label-SC_seg.nii.gz b/derivatives/labels/sub-pavia06/anat/sub-pavia06_space-other_T2star_label-SC_seg.nii.gz index c8b38a466f..fd6f204fe8 100644 --- a/derivatives/labels/sub-pavia06/anat/sub-pavia06_space-other_T2star_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-pavia06/anat/sub-pavia06_space-other_T2star_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s14953--6bf0026c22f7041bc2b4cd37878943b6a3a1e083a37a24e1c381a5a2cbb985f0.nii.gz +/annex/objects/SHA256E-s14974--dd691869918ad0ee8518ac1d951db86505e91bb70f6787b4d3e8d3ab230e39b8.nii.gz diff --git a/derivatives/labels/sub-pavia06/anat/sub-pavia06_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-pavia06/anat/sub-pavia06_space-other_T2star_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-pavia06/anat/sub-pavia06_space-other_T2star_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-perform01/anat/sub-perform01_space-other_T1w_label-discs_dlabel.json b/derivatives/labels/sub-perform01/anat/sub-perform01_T1w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-perform01/anat/sub-perform01_space-other_T1w_label-discs_dlabel.json rename to derivatives/labels/sub-perform01/anat/sub-perform01_T1w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-perform01/anat/sub-perform01_space-other_T1w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-perform01/anat/sub-perform01_T1w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-perform01/anat/sub-perform01_space-other_T1w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-perform01/anat/sub-perform01_T1w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-perform01/anat/sub-perform01_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-perform01/anat/sub-perform01_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-perform01/anat/sub-perform01_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-perform01/anat/sub-perform01_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-perform01/anat/sub-perform01_T2star_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-perform01/anat/sub-perform01_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-perform01/anat/sub-perform01_T2star_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-perform01/anat/sub-perform01_space-other_T2w_label-discs_dlabel.json b/derivatives/labels/sub-perform01/anat/sub-perform01_T2w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-perform01/anat/sub-perform01_space-other_T2w_label-discs_dlabel.json rename to derivatives/labels/sub-perform01/anat/sub-perform01_T2w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-perform01/anat/sub-perform01_space-other_T2w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-perform01/anat/sub-perform01_T2w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-perform01/anat/sub-perform01_space-other_T2w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-perform01/anat/sub-perform01_T2w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-perform01/anat/sub-perform01_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-perform01/anat/sub-perform01_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-perform01/anat/sub-perform01_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-perform01/anat/sub-perform01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-perform01/anat/sub-perform01_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-perform01/anat/sub-perform01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-perform01/anat/sub-perform01_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-perform01/anat/sub-perform01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-perform01/anat/sub-perform01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-perform01/anat/sub-perform01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-perform01/anat/sub-perform01_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-perform01/anat/sub-perform01_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-perform01/anat/sub-perform01_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-perform01/anat/sub-perform01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-perform01/anat/sub-perform01_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-perform01/anat/sub-perform01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-perform01/anat/sub-perform01_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-perform01/anat/sub-perform01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-perform01/anat/sub-perform01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-perform01/anat/sub-perform01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-perform01/anat/sub-perform01_space-other_T2star_label-SC_seg.nii.gz b/derivatives/labels/sub-perform01/anat/sub-perform01_space-other_T2star_label-SC_seg.nii.gz index 6e8788379c..8ac8e51f5f 100644 --- a/derivatives/labels/sub-perform01/anat/sub-perform01_space-other_T2star_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-perform01/anat/sub-perform01_space-other_T2star_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s14934--dac477b9301efba446c474e927d2a390a1bb8180bfb7acc4be01a00ec719f7f9.nii.gz +/annex/objects/SHA256E-s14955--2982cd5ded1bb59240cb617e5dc62f92a2b6b5178c6def8ee80c053945f69aff.nii.gz diff --git a/derivatives/labels/sub-perform01/anat/sub-perform01_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-perform01/anat/sub-perform01_space-other_T2star_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-perform01/anat/sub-perform01_space-other_T2star_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-perform02/anat/sub-perform02_space-other_T1w_label-discs_dlabel.json b/derivatives/labels/sub-perform02/anat/sub-perform02_T1w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-perform02/anat/sub-perform02_space-other_T1w_label-discs_dlabel.json rename to derivatives/labels/sub-perform02/anat/sub-perform02_T1w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-perform02/anat/sub-perform02_space-other_T1w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-perform02/anat/sub-perform02_T1w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-perform02/anat/sub-perform02_space-other_T1w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-perform02/anat/sub-perform02_T1w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-perform02/anat/sub-perform02_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-perform02/anat/sub-perform02_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-perform02/anat/sub-perform02_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-perform02/anat/sub-perform02_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-perform02/anat/sub-perform02_T2star_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-perform02/anat/sub-perform02_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-perform02/anat/sub-perform02_T2star_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-perform02/anat/sub-perform02_space-other_T2w_label-discs_dlabel.json b/derivatives/labels/sub-perform02/anat/sub-perform02_T2w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-perform02/anat/sub-perform02_space-other_T2w_label-discs_dlabel.json rename to derivatives/labels/sub-perform02/anat/sub-perform02_T2w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-perform02/anat/sub-perform02_space-other_T2w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-perform02/anat/sub-perform02_T2w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-perform02/anat/sub-perform02_space-other_T2w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-perform02/anat/sub-perform02_T2w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-perform02/anat/sub-perform02_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-perform02/anat/sub-perform02_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-perform02/anat/sub-perform02_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-perform02/anat/sub-perform02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-perform02/anat/sub-perform02_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-perform02/anat/sub-perform02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-perform02/anat/sub-perform02_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-perform02/anat/sub-perform02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-perform02/anat/sub-perform02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-perform02/anat/sub-perform02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-perform02/anat/sub-perform02_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-perform02/anat/sub-perform02_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-perform02/anat/sub-perform02_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-perform02/anat/sub-perform02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-perform02/anat/sub-perform02_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-perform02/anat/sub-perform02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-perform02/anat/sub-perform02_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-perform02/anat/sub-perform02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-perform02/anat/sub-perform02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-perform02/anat/sub-perform02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-perform02/anat/sub-perform02_space-other_T2star_label-SC_seg.nii.gz b/derivatives/labels/sub-perform02/anat/sub-perform02_space-other_T2star_label-SC_seg.nii.gz index 6b311f76f6..e2a7e56f12 100644 --- a/derivatives/labels/sub-perform02/anat/sub-perform02_space-other_T2star_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-perform02/anat/sub-perform02_space-other_T2star_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s6859--98d9d9115654ce544cee87cdd7d9bf73383b29bfb766b528f79c1f8841a1cee6.nii.gz +/annex/objects/SHA256E-s28514--2399dc356d9ea73161335c60a201ad89611153e860ff90fd8789272f5b584e9c.nii.gz diff --git a/derivatives/labels/sub-perform02/anat/sub-perform02_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-perform02/anat/sub-perform02_space-other_T2star_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-perform02/anat/sub-perform02_space-other_T2star_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-perform02/anat/sub-perform02_space-other_T2w_csflabel-SC_seg.json b/derivatives/labels/sub-perform02/anat/sub-perform02_space-other_T2w_label-CSF_seg.json similarity index 100% rename from derivatives/labels/sub-perform02/anat/sub-perform02_space-other_T2w_csflabel-SC_seg.json rename to derivatives/labels/sub-perform02/anat/sub-perform02_space-other_T2w_label-CSF_seg.json diff --git a/derivatives/labels/sub-perform02/anat/sub-perform02_space-other_T2w_csflabel-SC_seg.nii.gz b/derivatives/labels/sub-perform02/anat/sub-perform02_space-other_T2w_label-CSF_seg.nii.gz similarity index 100% rename from derivatives/labels/sub-perform02/anat/sub-perform02_space-other_T2w_csflabel-SC_seg.nii.gz rename to derivatives/labels/sub-perform02/anat/sub-perform02_space-other_T2w_label-CSF_seg.nii.gz diff --git a/derivatives/labels/sub-perform02/anat/sub-perform02_space-other_T2w_label-canal_seg.json b/derivatives/labels/sub-perform02/anat/sub-perform02_space-other_T2w_label-canal_seg.json new file mode 100644 index 0000000000..9b765ae333 --- /dev/null +++ b/derivatives/labels/sub-perform02/anat/sub-perform02_space-other_T2w_label-canal_seg.json @@ -0,0 +1,11 @@ +{ + "SpatialReference": { + "Orientation": "RPI", + "Resampling": "0.8x0.8x0.8" + }, + "GeneratedBy": [ + { + "Description": "Created from label-CSF_seg" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-perform02/anat/sub-perform02_space-other_T2w_label-canal_seg.nii.gz b/derivatives/labels/sub-perform02/anat/sub-perform02_space-other_T2w_label-canal_seg.nii.gz new file mode 100644 index 0000000000..bc677c85cd --- /dev/null +++ b/derivatives/labels/sub-perform02/anat/sub-perform02_space-other_T2w_label-canal_seg.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s120554--7e1967774f553add7fa46b9584f7d828b936c105a2da0ac431d82deaaaef8e39.nii.gz diff --git a/derivatives/labels/sub-perform03/anat/sub-perform03_space-other_T1w_label-discs_dlabel.json b/derivatives/labels/sub-perform03/anat/sub-perform03_T1w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-perform03/anat/sub-perform03_space-other_T1w_label-discs_dlabel.json rename to derivatives/labels/sub-perform03/anat/sub-perform03_T1w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-perform03/anat/sub-perform03_space-other_T1w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-perform03/anat/sub-perform03_T1w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-perform03/anat/sub-perform03_space-other_T1w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-perform03/anat/sub-perform03_T1w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-perform03/anat/sub-perform03_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-perform03/anat/sub-perform03_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-perform03/anat/sub-perform03_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-perform03/anat/sub-perform03_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-perform03/anat/sub-perform03_T2star_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-perform03/anat/sub-perform03_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-perform03/anat/sub-perform03_T2star_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-perform03/anat/sub-perform03_space-other_T2w_label-discs_dlabel.json b/derivatives/labels/sub-perform03/anat/sub-perform03_T2w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-perform03/anat/sub-perform03_space-other_T2w_label-discs_dlabel.json rename to derivatives/labels/sub-perform03/anat/sub-perform03_T2w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-perform03/anat/sub-perform03_space-other_T2w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-perform03/anat/sub-perform03_T2w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-perform03/anat/sub-perform03_space-other_T2w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-perform03/anat/sub-perform03_T2w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-perform03/anat/sub-perform03_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-perform03/anat/sub-perform03_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-perform03/anat/sub-perform03_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-perform03/anat/sub-perform03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-perform03/anat/sub-perform03_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-perform03/anat/sub-perform03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-perform03/anat/sub-perform03_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-perform03/anat/sub-perform03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-perform03/anat/sub-perform03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-perform03/anat/sub-perform03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-perform03/anat/sub-perform03_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-perform03/anat/sub-perform03_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-perform03/anat/sub-perform03_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-perform03/anat/sub-perform03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-perform03/anat/sub-perform03_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-perform03/anat/sub-perform03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-perform03/anat/sub-perform03_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-perform03/anat/sub-perform03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-perform03/anat/sub-perform03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-perform03/anat/sub-perform03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-perform03/anat/sub-perform03_space-other_T2star_label-SC_seg.nii.gz b/derivatives/labels/sub-perform03/anat/sub-perform03_space-other_T2star_label-SC_seg.nii.gz index ce1ff568c7..9c80a2f11f 100644 --- a/derivatives/labels/sub-perform03/anat/sub-perform03_space-other_T2star_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-perform03/anat/sub-perform03_space-other_T2star_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s6884--d617e96343f094bcb928ae4c95a3e9e1aaf4aa6efd81ad25eb6709c83dc8e482.nii.gz +/annex/objects/SHA256E-s28452--ec9390343fdcaf0b4158bbb79628022f906d0dd82ce1964e7ac68a2f04eae108.nii.gz diff --git a/derivatives/labels/sub-perform03/anat/sub-perform03_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-perform03/anat/sub-perform03_space-other_T2star_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-perform03/anat/sub-perform03_space-other_T2star_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-perform04/anat/sub-perform04_space-other_T1w_label-discs_dlabel.json b/derivatives/labels/sub-perform04/anat/sub-perform04_T1w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-perform04/anat/sub-perform04_space-other_T1w_label-discs_dlabel.json rename to derivatives/labels/sub-perform04/anat/sub-perform04_T1w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-perform04/anat/sub-perform04_space-other_T1w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-perform04/anat/sub-perform04_T1w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-perform04/anat/sub-perform04_space-other_T1w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-perform04/anat/sub-perform04_T1w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-perform04/anat/sub-perform04_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-perform04/anat/sub-perform04_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-perform04/anat/sub-perform04_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-perform04/anat/sub-perform04_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-perform04/anat/sub-perform04_T2star_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-perform04/anat/sub-perform04_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-perform04/anat/sub-perform04_T2star_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-perform04/anat/sub-perform04_space-other_T2w_label-discs_dlabel.json b/derivatives/labels/sub-perform04/anat/sub-perform04_T2w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-perform04/anat/sub-perform04_space-other_T2w_label-discs_dlabel.json rename to derivatives/labels/sub-perform04/anat/sub-perform04_T2w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-perform04/anat/sub-perform04_space-other_T2w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-perform04/anat/sub-perform04_T2w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-perform04/anat/sub-perform04_space-other_T2w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-perform04/anat/sub-perform04_T2w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-perform04/anat/sub-perform04_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-perform04/anat/sub-perform04_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-perform04/anat/sub-perform04_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-perform04/anat/sub-perform04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-perform04/anat/sub-perform04_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-perform04/anat/sub-perform04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-perform04/anat/sub-perform04_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-perform04/anat/sub-perform04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-perform04/anat/sub-perform04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-perform04/anat/sub-perform04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-perform04/anat/sub-perform04_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-perform04/anat/sub-perform04_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-perform04/anat/sub-perform04_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-perform04/anat/sub-perform04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-perform04/anat/sub-perform04_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-perform04/anat/sub-perform04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-perform04/anat/sub-perform04_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-perform04/anat/sub-perform04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-perform04/anat/sub-perform04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-perform04/anat/sub-perform04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-perform04/anat/sub-perform04_space-other_T2star_label-SC_seg.nii.gz b/derivatives/labels/sub-perform04/anat/sub-perform04_space-other_T2star_label-SC_seg.nii.gz index df5c337cab..ce1143f775 100644 --- a/derivatives/labels/sub-perform04/anat/sub-perform04_space-other_T2star_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-perform04/anat/sub-perform04_space-other_T2star_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s14923--15788351a7d62b693714d7652e16805e344b92ded78e5a37364fd1b585d32b68.nii.gz +/annex/objects/SHA256E-s14944--d3e17aa2cbcda15f9d71f66bf6878802e0427bde542b76262d2498d8c3292562.nii.gz diff --git a/derivatives/labels/sub-perform04/anat/sub-perform04_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-perform04/anat/sub-perform04_space-other_T2star_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-perform04/anat/sub-perform04_space-other_T2star_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-perform05/anat/sub-perform05_space-other_T1w_label-discs_dlabel.json b/derivatives/labels/sub-perform05/anat/sub-perform05_T1w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-perform05/anat/sub-perform05_space-other_T1w_label-discs_dlabel.json rename to derivatives/labels/sub-perform05/anat/sub-perform05_T1w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-perform05/anat/sub-perform05_space-other_T1w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-perform05/anat/sub-perform05_T1w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-perform05/anat/sub-perform05_space-other_T1w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-perform05/anat/sub-perform05_T1w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-perform05/anat/sub-perform05_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-perform05/anat/sub-perform05_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-perform05/anat/sub-perform05_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-perform05/anat/sub-perform05_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-perform05/anat/sub-perform05_T2star_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-perform05/anat/sub-perform05_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-perform05/anat/sub-perform05_T2star_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-perform05/anat/sub-perform05_space-other_T2w_label-discs_dlabel.json b/derivatives/labels/sub-perform05/anat/sub-perform05_T2w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-perform05/anat/sub-perform05_space-other_T2w_label-discs_dlabel.json rename to derivatives/labels/sub-perform05/anat/sub-perform05_T2w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-perform05/anat/sub-perform05_space-other_T2w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-perform05/anat/sub-perform05_T2w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-perform05/anat/sub-perform05_space-other_T2w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-perform05/anat/sub-perform05_T2w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-perform05/anat/sub-perform05_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-perform05/anat/sub-perform05_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-perform05/anat/sub-perform05_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-perform05/anat/sub-perform05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-perform05/anat/sub-perform05_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-perform05/anat/sub-perform05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-perform05/anat/sub-perform05_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-perform05/anat/sub-perform05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-perform05/anat/sub-perform05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-perform05/anat/sub-perform05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-perform05/anat/sub-perform05_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-perform05/anat/sub-perform05_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-perform05/anat/sub-perform05_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-perform05/anat/sub-perform05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-perform05/anat/sub-perform05_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-perform05/anat/sub-perform05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-perform05/anat/sub-perform05_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-perform05/anat/sub-perform05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-perform05/anat/sub-perform05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-perform05/anat/sub-perform05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-perform05/anat/sub-perform05_space-other_T2star_label-SC_seg.nii.gz b/derivatives/labels/sub-perform05/anat/sub-perform05_space-other_T2star_label-SC_seg.nii.gz index fe6ccc8a46..2ec5c8a311 100644 --- a/derivatives/labels/sub-perform05/anat/sub-perform05_space-other_T2star_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-perform05/anat/sub-perform05_space-other_T2star_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s14726--3d217ed04478a4ddaefee2836ae982b89e458531d6c31a291a45a19f5e21a60b.nii.gz +/annex/objects/SHA256E-s14747--fa15f4633760309e61de37fd83390ab9cc61fc034723c1bdf755d0f304ab978a.nii.gz diff --git a/derivatives/labels/sub-perform05/anat/sub-perform05_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-perform05/anat/sub-perform05_space-other_T2star_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-perform05/anat/sub-perform05_space-other_T2star_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-perform06/anat/sub-perform06_space-other_T1w_label-discs_dlabel.json b/derivatives/labels/sub-perform06/anat/sub-perform06_T1w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-perform06/anat/sub-perform06_space-other_T1w_label-discs_dlabel.json rename to derivatives/labels/sub-perform06/anat/sub-perform06_T1w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-perform06/anat/sub-perform06_space-other_T1w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-perform06/anat/sub-perform06_T1w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-perform06/anat/sub-perform06_space-other_T1w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-perform06/anat/sub-perform06_T1w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-perform06/anat/sub-perform06_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-perform06/anat/sub-perform06_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-perform06/anat/sub-perform06_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-perform06/anat/sub-perform06_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-perform06/anat/sub-perform06_T2star_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-perform06/anat/sub-perform06_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-perform06/anat/sub-perform06_T2star_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-perform06/anat/sub-perform06_space-other_T2w_label-discs_dlabel.json b/derivatives/labels/sub-perform06/anat/sub-perform06_T2w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-perform06/anat/sub-perform06_space-other_T2w_label-discs_dlabel.json rename to derivatives/labels/sub-perform06/anat/sub-perform06_T2w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-perform06/anat/sub-perform06_space-other_T2w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-perform06/anat/sub-perform06_T2w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-perform06/anat/sub-perform06_space-other_T2w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-perform06/anat/sub-perform06_T2w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-perform06/anat/sub-perform06_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-perform06/anat/sub-perform06_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-perform06/anat/sub-perform06_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-perform06/anat/sub-perform06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-perform06/anat/sub-perform06_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-perform06/anat/sub-perform06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-perform06/anat/sub-perform06_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-perform06/anat/sub-perform06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-perform06/anat/sub-perform06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-perform06/anat/sub-perform06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-perform06/anat/sub-perform06_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-perform06/anat/sub-perform06_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-perform06/anat/sub-perform06_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-perform06/anat/sub-perform06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-perform06/anat/sub-perform06_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-perform06/anat/sub-perform06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-perform06/anat/sub-perform06_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-perform06/anat/sub-perform06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-perform06/anat/sub-perform06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-perform06/anat/sub-perform06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-perform06/anat/sub-perform06_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.json b/derivatives/labels/sub-perform06/anat/sub-perform06_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.json new file mode 100644 index 0000000000..e537a137e5 --- /dev/null +++ b/derivatives/labels/sub-perform06/anat/sub-perform06_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.json @@ -0,0 +1,11 @@ +{ + "SpatialReference": { + "Orientation": "RPI", + "Resampling": "1x1x1" + }, + "GeneratedBy": [ + { + "Description": "Manual label of C2 and C5 mid-vertebrae, at the center of the spinal cord." + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-perform06/anat/sub-perform06_space-other_T1w_RPI_r_labels-manual.nii.gz b/derivatives/labels/sub-perform06/anat/sub-perform06_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-perform06/anat/sub-perform06_space-other_T1w_RPI_r_labels-manual.nii.gz rename to derivatives/labels/sub-perform06/anat/sub-perform06_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.nii.gz diff --git a/derivatives/labels/sub-perform06/anat/sub-perform06_space-other_T2star_label-SC_seg.nii.gz b/derivatives/labels/sub-perform06/anat/sub-perform06_space-other_T2star_label-SC_seg.nii.gz index c1ac94716e..5e78eac59b 100644 --- a/derivatives/labels/sub-perform06/anat/sub-perform06_space-other_T2star_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-perform06/anat/sub-perform06_space-other_T2star_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s14888--ac9df9f5e6470fadd3164f3a4bc8e6d223b6535bf741251b83a16961fa250608.nii.gz +/annex/objects/SHA256E-s14909--32d83b377f258bad29ed734aa587a02d07b7bc0968745aeb4e48363d6f03e97e.nii.gz diff --git a/derivatives/labels/sub-perform06/anat/sub-perform06_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-perform06/anat/sub-perform06_space-other_T2star_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-perform06/anat/sub-perform06_space-other_T2star_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-queensland01/anat/sub-queensland01_space-other_T1w_label-discs_dlabel.json b/derivatives/labels/sub-queensland01/anat/sub-queensland01_T1w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-queensland01/anat/sub-queensland01_space-other_T1w_label-discs_dlabel.json rename to derivatives/labels/sub-queensland01/anat/sub-queensland01_T1w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-queensland01/anat/sub-queensland01_space-other_T1w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-queensland01/anat/sub-queensland01_T1w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-queensland01/anat/sub-queensland01_space-other_T1w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-queensland01/anat/sub-queensland01_T1w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-queensland01/anat/sub-queensland01_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-queensland01/anat/sub-queensland01_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-queensland01/anat/sub-queensland01_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-queensland01/anat/sub-queensland01_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-queensland01/anat/sub-queensland01_T2star_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-queensland01/anat/sub-queensland01_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-queensland01/anat/sub-queensland01_T2star_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-queensland01/anat/sub-queensland01_space-other_T2w_label-discs_dlabel.json b/derivatives/labels/sub-queensland01/anat/sub-queensland01_T2w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-queensland01/anat/sub-queensland01_space-other_T2w_label-discs_dlabel.json rename to derivatives/labels/sub-queensland01/anat/sub-queensland01_T2w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-queensland01/anat/sub-queensland01_space-other_T2w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-queensland01/anat/sub-queensland01_T2w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-queensland01/anat/sub-queensland01_space-other_T2w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-queensland01/anat/sub-queensland01_T2w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-queensland01/anat/sub-queensland01_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-queensland01/anat/sub-queensland01_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-queensland01/anat/sub-queensland01_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-queensland01/anat/sub-queensland01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-queensland01/anat/sub-queensland01_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-queensland01/anat/sub-queensland01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-queensland01/anat/sub-queensland01_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-queensland01/anat/sub-queensland01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-queensland01/anat/sub-queensland01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-queensland01/anat/sub-queensland01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-queensland01/anat/sub-queensland01_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-queensland01/anat/sub-queensland01_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-queensland01/anat/sub-queensland01_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-queensland01/anat/sub-queensland01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-queensland01/anat/sub-queensland01_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-queensland01/anat/sub-queensland01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-queensland01/anat/sub-queensland01_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-queensland01/anat/sub-queensland01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-queensland01/anat/sub-queensland01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-queensland01/anat/sub-queensland01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-queensland01/anat/sub-queensland01_space-other_T2star_label-SC_seg.nii.gz b/derivatives/labels/sub-queensland01/anat/sub-queensland01_space-other_T2star_label-SC_seg.nii.gz index 113ccc379b..eb189bc1da 100644 --- a/derivatives/labels/sub-queensland01/anat/sub-queensland01_space-other_T2star_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-queensland01/anat/sub-queensland01_space-other_T2star_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s15143--59b2ff3eb949193974fa3820b7ddda1c82cc851854ed2bf9d4d51ee3e4bb8c0f.nii.gz +/annex/objects/SHA256E-s15164--ad39b3bb4c5c64e34bd8286556a5a740a4e0c9f033fdb9f55c15bb09d5608306.nii.gz diff --git a/derivatives/labels/sub-queensland01/anat/sub-queensland01_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-queensland01/anat/sub-queensland01_space-other_T2star_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-queensland01/anat/sub-queensland01_space-other_T2star_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-queensland02/anat/sub-queensland02_space-other_T1w_label-discs_dlabel.json b/derivatives/labels/sub-queensland02/anat/sub-queensland02_T1w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-queensland02/anat/sub-queensland02_space-other_T1w_label-discs_dlabel.json rename to derivatives/labels/sub-queensland02/anat/sub-queensland02_T1w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-queensland02/anat/sub-queensland02_space-other_T1w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-queensland02/anat/sub-queensland02_T1w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-queensland02/anat/sub-queensland02_space-other_T1w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-queensland02/anat/sub-queensland02_T1w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-queensland02/anat/sub-queensland02_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-queensland02/anat/sub-queensland02_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-queensland02/anat/sub-queensland02_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-queensland02/anat/sub-queensland02_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-queensland02/anat/sub-queensland02_T2star_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-queensland02/anat/sub-queensland02_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-queensland02/anat/sub-queensland02_T2star_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-queensland02/anat/sub-queensland02_space-other_T2w_label-discs_dlabel.json b/derivatives/labels/sub-queensland02/anat/sub-queensland02_T2w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-queensland02/anat/sub-queensland02_space-other_T2w_label-discs_dlabel.json rename to derivatives/labels/sub-queensland02/anat/sub-queensland02_T2w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-queensland02/anat/sub-queensland02_space-other_T2w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-queensland02/anat/sub-queensland02_T2w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-queensland02/anat/sub-queensland02_space-other_T2w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-queensland02/anat/sub-queensland02_T2w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-queensland02/anat/sub-queensland02_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-queensland02/anat/sub-queensland02_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-queensland02/anat/sub-queensland02_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-queensland02/anat/sub-queensland02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-queensland02/anat/sub-queensland02_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-queensland02/anat/sub-queensland02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-queensland02/anat/sub-queensland02_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-queensland02/anat/sub-queensland02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-queensland02/anat/sub-queensland02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-queensland02/anat/sub-queensland02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-queensland02/anat/sub-queensland02_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-queensland02/anat/sub-queensland02_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-queensland02/anat/sub-queensland02_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-queensland02/anat/sub-queensland02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-queensland02/anat/sub-queensland02_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-queensland02/anat/sub-queensland02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-queensland02/anat/sub-queensland02_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-queensland02/anat/sub-queensland02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-queensland02/anat/sub-queensland02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-queensland02/anat/sub-queensland02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-queensland02/anat/sub-queensland02_space-other_T2star_label-SC_seg.nii.gz b/derivatives/labels/sub-queensland02/anat/sub-queensland02_space-other_T2star_label-SC_seg.nii.gz index c9b28b43b2..2124f2b94a 100644 --- a/derivatives/labels/sub-queensland02/anat/sub-queensland02_space-other_T2star_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-queensland02/anat/sub-queensland02_space-other_T2star_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s14794--8fcf73f7774384de36206793de246afac302f908afb270f3903be4caf6bbe602.nii.gz +/annex/objects/SHA256E-s14815--94ab62ebf219d5737048b78abbb3ef9c420cf0f18e77921ea35925b62a948909.nii.gz diff --git a/derivatives/labels/sub-queensland02/anat/sub-queensland02_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-queensland02/anat/sub-queensland02_space-other_T2star_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-queensland02/anat/sub-queensland02_space-other_T2star_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-queensland03/anat/sub-queensland03_space-other_T1w_label-discs_dlabel.json b/derivatives/labels/sub-queensland03/anat/sub-queensland03_T1w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-queensland03/anat/sub-queensland03_space-other_T1w_label-discs_dlabel.json rename to derivatives/labels/sub-queensland03/anat/sub-queensland03_T1w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-queensland03/anat/sub-queensland03_space-other_T1w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-queensland03/anat/sub-queensland03_T1w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-queensland03/anat/sub-queensland03_space-other_T1w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-queensland03/anat/sub-queensland03_T1w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-queensland03/anat/sub-queensland03_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-queensland03/anat/sub-queensland03_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-queensland03/anat/sub-queensland03_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-queensland03/anat/sub-queensland03_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-queensland03/anat/sub-queensland03_T2star_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-queensland03/anat/sub-queensland03_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-queensland03/anat/sub-queensland03_T2star_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-queensland03/anat/sub-queensland03_space-other_T2w_label-discs_dlabel.json b/derivatives/labels/sub-queensland03/anat/sub-queensland03_T2w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-queensland03/anat/sub-queensland03_space-other_T2w_label-discs_dlabel.json rename to derivatives/labels/sub-queensland03/anat/sub-queensland03_T2w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-queensland03/anat/sub-queensland03_space-other_T2w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-queensland03/anat/sub-queensland03_T2w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-queensland03/anat/sub-queensland03_space-other_T2w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-queensland03/anat/sub-queensland03_T2w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-queensland03/anat/sub-queensland03_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-queensland03/anat/sub-queensland03_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-queensland03/anat/sub-queensland03_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-queensland03/anat/sub-queensland03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-queensland03/anat/sub-queensland03_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-queensland03/anat/sub-queensland03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-queensland03/anat/sub-queensland03_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-queensland03/anat/sub-queensland03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-queensland03/anat/sub-queensland03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-queensland03/anat/sub-queensland03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-queensland03/anat/sub-queensland03_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-queensland03/anat/sub-queensland03_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-queensland03/anat/sub-queensland03_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-queensland03/anat/sub-queensland03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-queensland03/anat/sub-queensland03_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-queensland03/anat/sub-queensland03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-queensland03/anat/sub-queensland03_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-queensland03/anat/sub-queensland03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-queensland03/anat/sub-queensland03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-queensland03/anat/sub-queensland03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-queensland03/anat/sub-queensland03_space-other_T2star_label-SC_seg.nii.gz b/derivatives/labels/sub-queensland03/anat/sub-queensland03_space-other_T2star_label-SC_seg.nii.gz index 9aaa7c7751..2edae689a6 100644 --- a/derivatives/labels/sub-queensland03/anat/sub-queensland03_space-other_T2star_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-queensland03/anat/sub-queensland03_space-other_T2star_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s15099--cec9e6ffb81e0562897493faed876487208de22c58a255cf0bcf0605cb33e728.nii.gz +/annex/objects/SHA256E-s15120--17796f5d06320216e70d4ba805d8f574456e442b8034bdaed45d4d561f45ab27.nii.gz diff --git a/derivatives/labels/sub-queensland03/anat/sub-queensland03_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-queensland03/anat/sub-queensland03_space-other_T2star_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-queensland03/anat/sub-queensland03_space-other_T2star_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-queensland04/anat/sub-queensland04_space-other_T1w_label-discs_dlabel.json b/derivatives/labels/sub-queensland04/anat/sub-queensland04_T1w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-queensland04/anat/sub-queensland04_space-other_T1w_label-discs_dlabel.json rename to derivatives/labels/sub-queensland04/anat/sub-queensland04_T1w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-queensland04/anat/sub-queensland04_space-other_T1w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-queensland04/anat/sub-queensland04_T1w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-queensland04/anat/sub-queensland04_space-other_T1w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-queensland04/anat/sub-queensland04_T1w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-queensland04/anat/sub-queensland04_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-queensland04/anat/sub-queensland04_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-queensland04/anat/sub-queensland04_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-queensland04/anat/sub-queensland04_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-queensland04/anat/sub-queensland04_T2star_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-queensland04/anat/sub-queensland04_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-queensland04/anat/sub-queensland04_T2star_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-queensland04/anat/sub-queensland04_space-other_T2w_label-discs_dlabel.json b/derivatives/labels/sub-queensland04/anat/sub-queensland04_T2w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-queensland04/anat/sub-queensland04_space-other_T2w_label-discs_dlabel.json rename to derivatives/labels/sub-queensland04/anat/sub-queensland04_T2w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-queensland04/anat/sub-queensland04_space-other_T2w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-queensland04/anat/sub-queensland04_T2w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-queensland04/anat/sub-queensland04_space-other_T2w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-queensland04/anat/sub-queensland04_T2w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-queensland04/anat/sub-queensland04_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-queensland04/anat/sub-queensland04_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-queensland04/anat/sub-queensland04_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-queensland04/anat/sub-queensland04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-queensland04/anat/sub-queensland04_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-queensland04/anat/sub-queensland04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-queensland04/anat/sub-queensland04_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-queensland04/anat/sub-queensland04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-queensland04/anat/sub-queensland04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-queensland04/anat/sub-queensland04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-queensland04/anat/sub-queensland04_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-queensland04/anat/sub-queensland04_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-queensland04/anat/sub-queensland04_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-queensland04/anat/sub-queensland04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-queensland04/anat/sub-queensland04_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-queensland04/anat/sub-queensland04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-queensland04/anat/sub-queensland04_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-queensland04/anat/sub-queensland04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-queensland04/anat/sub-queensland04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-queensland04/anat/sub-queensland04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-queensland04/anat/sub-queensland04_space-other_T2star_label-SC_seg.nii.gz b/derivatives/labels/sub-queensland04/anat/sub-queensland04_space-other_T2star_label-SC_seg.nii.gz index 8abb731bb5..bba0f72fc8 100644 --- a/derivatives/labels/sub-queensland04/anat/sub-queensland04_space-other_T2star_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-queensland04/anat/sub-queensland04_space-other_T2star_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s14723--6681f1d89bf2f76e6fbb0589cd5c78fdcf2324af2c35e678b4c755fd2765716c.nii.gz +/annex/objects/SHA256E-s14744--8cf8709947c81e52606c15626bc7f3f1eec11f3ec814691cc7bfdf79a6add5b9.nii.gz diff --git a/derivatives/labels/sub-queensland04/anat/sub-queensland04_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-queensland04/anat/sub-queensland04_space-other_T2star_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-queensland04/anat/sub-queensland04_space-other_T2star_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-queensland05/anat/sub-queensland05_space-other_T1w_label-discs_dlabel.json b/derivatives/labels/sub-queensland05/anat/sub-queensland05_T1w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-queensland05/anat/sub-queensland05_space-other_T1w_label-discs_dlabel.json rename to derivatives/labels/sub-queensland05/anat/sub-queensland05_T1w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-queensland05/anat/sub-queensland05_space-other_T1w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-queensland05/anat/sub-queensland05_T1w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-queensland05/anat/sub-queensland05_space-other_T1w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-queensland05/anat/sub-queensland05_T1w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-queensland05/anat/sub-queensland05_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-queensland05/anat/sub-queensland05_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-queensland05/anat/sub-queensland05_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-queensland05/anat/sub-queensland05_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-queensland05/anat/sub-queensland05_T2star_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-queensland05/anat/sub-queensland05_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-queensland05/anat/sub-queensland05_T2star_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-queensland05/anat/sub-queensland05_space-other_T2w_label-discs_dlabel.json b/derivatives/labels/sub-queensland05/anat/sub-queensland05_T2w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-queensland05/anat/sub-queensland05_space-other_T2w_label-discs_dlabel.json rename to derivatives/labels/sub-queensland05/anat/sub-queensland05_T2w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-queensland05/anat/sub-queensland05_space-other_T2w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-queensland05/anat/sub-queensland05_T2w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-queensland05/anat/sub-queensland05_space-other_T2w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-queensland05/anat/sub-queensland05_T2w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-queensland05/anat/sub-queensland05_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-queensland05/anat/sub-queensland05_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-queensland05/anat/sub-queensland05_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-queensland05/anat/sub-queensland05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-queensland05/anat/sub-queensland05_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-queensland05/anat/sub-queensland05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-queensland05/anat/sub-queensland05_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-queensland05/anat/sub-queensland05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-queensland05/anat/sub-queensland05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-queensland05/anat/sub-queensland05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-queensland05/anat/sub-queensland05_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-queensland05/anat/sub-queensland05_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-queensland05/anat/sub-queensland05_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-queensland05/anat/sub-queensland05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-queensland05/anat/sub-queensland05_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-queensland05/anat/sub-queensland05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-queensland05/anat/sub-queensland05_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-queensland05/anat/sub-queensland05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-queensland05/anat/sub-queensland05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-queensland05/anat/sub-queensland05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-queensland05/anat/sub-queensland05_space-other_T2star_label-SC_seg.nii.gz b/derivatives/labels/sub-queensland05/anat/sub-queensland05_space-other_T2star_label-SC_seg.nii.gz index 56e7790feb..d9eeca0721 100644 --- a/derivatives/labels/sub-queensland05/anat/sub-queensland05_space-other_T2star_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-queensland05/anat/sub-queensland05_space-other_T2star_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s14930--31c220ea5ca2e7f14ac2fc1d59edc0e0010b223d27f03278a89cbb4ecab54836.nii.gz +/annex/objects/SHA256E-s14951--a9a7f6b757ce00c7ba036341050f25f0cd451ee44f775a784f8046cbd0fdab89.nii.gz diff --git a/derivatives/labels/sub-queensland05/anat/sub-queensland05_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-queensland05/anat/sub-queensland05_space-other_T2star_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-queensland05/anat/sub-queensland05_space-other_T2star_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-queensland06/anat/sub-queensland06_space-other_T1w_label-discs_dlabel.json b/derivatives/labels/sub-queensland06/anat/sub-queensland06_T1w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-queensland06/anat/sub-queensland06_space-other_T1w_label-discs_dlabel.json rename to derivatives/labels/sub-queensland06/anat/sub-queensland06_T1w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-queensland06/anat/sub-queensland06_space-other_T1w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-queensland06/anat/sub-queensland06_T1w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-queensland06/anat/sub-queensland06_space-other_T1w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-queensland06/anat/sub-queensland06_T1w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-queensland06/anat/sub-queensland06_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-queensland06/anat/sub-queensland06_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-queensland06/anat/sub-queensland06_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-queensland06/anat/sub-queensland06_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-queensland06/anat/sub-queensland06_T2star_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-queensland06/anat/sub-queensland06_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-queensland06/anat/sub-queensland06_T2star_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-queensland06/anat/sub-queensland06_space-other_T2w_label-discs_dlabel.json b/derivatives/labels/sub-queensland06/anat/sub-queensland06_T2w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-queensland06/anat/sub-queensland06_space-other_T2w_label-discs_dlabel.json rename to derivatives/labels/sub-queensland06/anat/sub-queensland06_T2w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-queensland06/anat/sub-queensland06_space-other_T2w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-queensland06/anat/sub-queensland06_T2w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-queensland06/anat/sub-queensland06_space-other_T2w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-queensland06/anat/sub-queensland06_T2w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-queensland06/anat/sub-queensland06_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-queensland06/anat/sub-queensland06_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-queensland06/anat/sub-queensland06_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-queensland06/anat/sub-queensland06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-queensland06/anat/sub-queensland06_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-queensland06/anat/sub-queensland06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-queensland06/anat/sub-queensland06_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-queensland06/anat/sub-queensland06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-queensland06/anat/sub-queensland06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-queensland06/anat/sub-queensland06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-queensland06/anat/sub-queensland06_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-queensland06/anat/sub-queensland06_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-queensland06/anat/sub-queensland06_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-queensland06/anat/sub-queensland06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-queensland06/anat/sub-queensland06_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-queensland06/anat/sub-queensland06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-queensland06/anat/sub-queensland06_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-queensland06/anat/sub-queensland06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-queensland06/anat/sub-queensland06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-queensland06/anat/sub-queensland06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-queensland06/anat/sub-queensland06_space-other_T2star_label-SC_seg.nii.gz b/derivatives/labels/sub-queensland06/anat/sub-queensland06_space-other_T2star_label-SC_seg.nii.gz index 2ef7e3f82e..21a70b395c 100644 --- a/derivatives/labels/sub-queensland06/anat/sub-queensland06_space-other_T2star_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-queensland06/anat/sub-queensland06_space-other_T2star_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s14810--5e01f23f3dfe458566bde717928367ac50f17830ec05fb9f374f0b590cee1a24.nii.gz +/annex/objects/SHA256E-s14831--e56842ce368d26c698dd8e04cb70046d42be2a217006273feea2d5c4f23ec429.nii.gz diff --git a/derivatives/labels/sub-queensland06/anat/sub-queensland06_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-queensland06/anat/sub-queensland06_space-other_T2star_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-queensland06/anat/sub-queensland06_space-other_T2star_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-sherbrooke01/anat/sub-sherbrooke01_space-other_T1w_label-discs_dlabel.json b/derivatives/labels/sub-sherbrooke01/anat/sub-sherbrooke01_T1w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-sherbrooke01/anat/sub-sherbrooke01_space-other_T1w_label-discs_dlabel.json rename to derivatives/labels/sub-sherbrooke01/anat/sub-sherbrooke01_T1w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-sherbrooke01/anat/sub-sherbrooke01_space-other_T1w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-sherbrooke01/anat/sub-sherbrooke01_T1w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-sherbrooke01/anat/sub-sherbrooke01_space-other_T1w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-sherbrooke01/anat/sub-sherbrooke01_T1w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-sherbrooke01/anat/sub-sherbrooke01_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-sherbrooke01/anat/sub-sherbrooke01_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-sherbrooke01/anat/sub-sherbrooke01_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-sherbrooke01/anat/sub-sherbrooke01_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-sherbrooke01/anat/sub-sherbrooke01_T2star_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-sherbrooke01/anat/sub-sherbrooke01_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-sherbrooke01/anat/sub-sherbrooke01_T2star_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-sherbrooke01/anat/sub-sherbrooke01_space-other_T2w_label-discs_dlabel.json b/derivatives/labels/sub-sherbrooke01/anat/sub-sherbrooke01_T2w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-sherbrooke01/anat/sub-sherbrooke01_space-other_T2w_label-discs_dlabel.json rename to derivatives/labels/sub-sherbrooke01/anat/sub-sherbrooke01_T2w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-sherbrooke01/anat/sub-sherbrooke01_space-other_T2w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-sherbrooke01/anat/sub-sherbrooke01_T2w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-sherbrooke01/anat/sub-sherbrooke01_space-other_T2w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-sherbrooke01/anat/sub-sherbrooke01_T2w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-sherbrooke01/anat/sub-sherbrooke01_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-sherbrooke01/anat/sub-sherbrooke01_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-sherbrooke01/anat/sub-sherbrooke01_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-sherbrooke01/anat/sub-sherbrooke01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-sherbrooke01/anat/sub-sherbrooke01_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-sherbrooke01/anat/sub-sherbrooke01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-sherbrooke01/anat/sub-sherbrooke01_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-sherbrooke01/anat/sub-sherbrooke01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-sherbrooke01/anat/sub-sherbrooke01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-sherbrooke01/anat/sub-sherbrooke01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-sherbrooke01/anat/sub-sherbrooke01_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-sherbrooke01/anat/sub-sherbrooke01_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-sherbrooke01/anat/sub-sherbrooke01_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-sherbrooke01/anat/sub-sherbrooke01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-sherbrooke01/anat/sub-sherbrooke01_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-sherbrooke01/anat/sub-sherbrooke01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-sherbrooke01/anat/sub-sherbrooke01_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-sherbrooke01/anat/sub-sherbrooke01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-sherbrooke01/anat/sub-sherbrooke01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-sherbrooke01/anat/sub-sherbrooke01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-sherbrooke01/anat/sub-sherbrooke01_space-other_T2star_gmlabel-SC_seg.nii.gz b/derivatives/labels/sub-sherbrooke01/anat/sub-sherbrooke01_space-other_T2star_gmlabel-SC_seg.nii.gz index 4aee8b5032..cfc4ed91f8 100644 --- a/derivatives/labels/sub-sherbrooke01/anat/sub-sherbrooke01_space-other_T2star_gmlabel-SC_seg.nii.gz +++ b/derivatives/labels/sub-sherbrooke01/anat/sub-sherbrooke01_space-other_T2star_gmlabel-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s55331--6c0f34c26284de4a95ae65efe6da3447053ae9db7f65b4b59ce9b3704b28252e.nii.gz +/annex/objects/SHA256E-s55351--b3fe06f8eec50790e2d656bdb00358eb81a816d94926169ff5b137f08ae0de03.nii.gz diff --git a/derivatives/labels/sub-sherbrooke01/anat/sub-sherbrooke01_space-other_T2star_label-SC_seg.nii.gz b/derivatives/labels/sub-sherbrooke01/anat/sub-sherbrooke01_space-other_T2star_label-SC_seg.nii.gz index 4328dca805..403af75460 100644 --- a/derivatives/labels/sub-sherbrooke01/anat/sub-sherbrooke01_space-other_T2star_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-sherbrooke01/anat/sub-sherbrooke01_space-other_T2star_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s8265--19b145fa99d8e1c1ead3a631d70677687801098dd9e1ced7bdd58d77b872d3ae.nii.gz +/annex/objects/SHA256E-s8286--5127a011ffca40c63b0043fa693b49e1ab410531cbb16c681918fea239264430.nii.gz diff --git a/derivatives/labels/sub-sherbrooke01/anat/sub-sherbrooke01_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-sherbrooke01/anat/sub-sherbrooke01_space-other_T2star_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-sherbrooke01/anat/sub-sherbrooke01_space-other_T2star_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-sherbrooke02/anat/sub-sherbrooke02_space-other_T1w_label-discs_dlabel.json b/derivatives/labels/sub-sherbrooke02/anat/sub-sherbrooke02_T1w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-sherbrooke02/anat/sub-sherbrooke02_space-other_T1w_label-discs_dlabel.json rename to derivatives/labels/sub-sherbrooke02/anat/sub-sherbrooke02_T1w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-sherbrooke02/anat/sub-sherbrooke02_space-other_T1w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-sherbrooke02/anat/sub-sherbrooke02_T1w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-sherbrooke02/anat/sub-sherbrooke02_space-other_T1w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-sherbrooke02/anat/sub-sherbrooke02_T1w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-sherbrooke02/anat/sub-sherbrooke02_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-sherbrooke02/anat/sub-sherbrooke02_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-sherbrooke02/anat/sub-sherbrooke02_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-sherbrooke02/anat/sub-sherbrooke02_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-sherbrooke02/anat/sub-sherbrooke02_T2star_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-sherbrooke02/anat/sub-sherbrooke02_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-sherbrooke02/anat/sub-sherbrooke02_T2star_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-sherbrooke02/anat/sub-sherbrooke02_space-other_T2w_label-discs_dlabel.json b/derivatives/labels/sub-sherbrooke02/anat/sub-sherbrooke02_T2w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-sherbrooke02/anat/sub-sherbrooke02_space-other_T2w_label-discs_dlabel.json rename to derivatives/labels/sub-sherbrooke02/anat/sub-sherbrooke02_T2w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-sherbrooke02/anat/sub-sherbrooke02_space-other_T2w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-sherbrooke02/anat/sub-sherbrooke02_T2w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-sherbrooke02/anat/sub-sherbrooke02_space-other_T2w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-sherbrooke02/anat/sub-sherbrooke02_T2w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-sherbrooke02/anat/sub-sherbrooke02_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-sherbrooke02/anat/sub-sherbrooke02_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-sherbrooke02/anat/sub-sherbrooke02_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-sherbrooke02/anat/sub-sherbrooke02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-sherbrooke02/anat/sub-sherbrooke02_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-sherbrooke02/anat/sub-sherbrooke02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-sherbrooke02/anat/sub-sherbrooke02_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-sherbrooke02/anat/sub-sherbrooke02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-sherbrooke02/anat/sub-sherbrooke02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-sherbrooke02/anat/sub-sherbrooke02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-sherbrooke02/anat/sub-sherbrooke02_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-sherbrooke02/anat/sub-sherbrooke02_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-sherbrooke02/anat/sub-sherbrooke02_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-sherbrooke02/anat/sub-sherbrooke02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-sherbrooke02/anat/sub-sherbrooke02_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-sherbrooke02/anat/sub-sherbrooke02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-sherbrooke02/anat/sub-sherbrooke02_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-sherbrooke02/anat/sub-sherbrooke02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-sherbrooke02/anat/sub-sherbrooke02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-sherbrooke02/anat/sub-sherbrooke02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-sherbrooke02/anat/sub-sherbrooke02_space-other_T2star_label-SC_seg.nii.gz b/derivatives/labels/sub-sherbrooke02/anat/sub-sherbrooke02_space-other_T2star_label-SC_seg.nii.gz index cf575eaeee..43400c5526 100644 --- a/derivatives/labels/sub-sherbrooke02/anat/sub-sherbrooke02_space-other_T2star_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-sherbrooke02/anat/sub-sherbrooke02_space-other_T2star_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s8293--b0631300298a06789293c7c73b8aabd138b6c3bbe00deeb0e45c01ccf2c30870.nii.gz +/annex/objects/SHA256E-s8314--eadbefc268538b25029352c54816769ac758a827835d16374a450a699542b2ed.nii.gz diff --git a/derivatives/labels/sub-sherbrooke02/anat/sub-sherbrooke02_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-sherbrooke02/anat/sub-sherbrooke02_space-other_T2star_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-sherbrooke02/anat/sub-sherbrooke02_space-other_T2star_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-sherbrooke03/anat/sub-sherbrooke03_space-other_T1w_label-discs_dlabel.json b/derivatives/labels/sub-sherbrooke03/anat/sub-sherbrooke03_T1w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-sherbrooke03/anat/sub-sherbrooke03_space-other_T1w_label-discs_dlabel.json rename to derivatives/labels/sub-sherbrooke03/anat/sub-sherbrooke03_T1w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-sherbrooke03/anat/sub-sherbrooke03_space-other_T1w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-sherbrooke03/anat/sub-sherbrooke03_T1w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-sherbrooke03/anat/sub-sherbrooke03_space-other_T1w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-sherbrooke03/anat/sub-sherbrooke03_T1w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-sherbrooke03/anat/sub-sherbrooke03_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-sherbrooke03/anat/sub-sherbrooke03_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-sherbrooke03/anat/sub-sherbrooke03_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-sherbrooke03/anat/sub-sherbrooke03_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-sherbrooke03/anat/sub-sherbrooke03_T2star_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-sherbrooke03/anat/sub-sherbrooke03_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-sherbrooke03/anat/sub-sherbrooke03_T2star_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-sherbrooke03/anat/sub-sherbrooke03_space-other_T2w_label-discs_dlabel.json b/derivatives/labels/sub-sherbrooke03/anat/sub-sherbrooke03_T2w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-sherbrooke03/anat/sub-sherbrooke03_space-other_T2w_label-discs_dlabel.json rename to derivatives/labels/sub-sherbrooke03/anat/sub-sherbrooke03_T2w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-sherbrooke03/anat/sub-sherbrooke03_space-other_T2w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-sherbrooke03/anat/sub-sherbrooke03_T2w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-sherbrooke03/anat/sub-sherbrooke03_space-other_T2w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-sherbrooke03/anat/sub-sherbrooke03_T2w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-sherbrooke03/anat/sub-sherbrooke03_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-sherbrooke03/anat/sub-sherbrooke03_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-sherbrooke03/anat/sub-sherbrooke03_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-sherbrooke03/anat/sub-sherbrooke03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-sherbrooke03/anat/sub-sherbrooke03_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-sherbrooke03/anat/sub-sherbrooke03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-sherbrooke03/anat/sub-sherbrooke03_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-sherbrooke03/anat/sub-sherbrooke03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-sherbrooke03/anat/sub-sherbrooke03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-sherbrooke03/anat/sub-sherbrooke03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-sherbrooke03/anat/sub-sherbrooke03_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-sherbrooke03/anat/sub-sherbrooke03_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-sherbrooke03/anat/sub-sherbrooke03_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-sherbrooke03/anat/sub-sherbrooke03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-sherbrooke03/anat/sub-sherbrooke03_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-sherbrooke03/anat/sub-sherbrooke03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-sherbrooke03/anat/sub-sherbrooke03_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-sherbrooke03/anat/sub-sherbrooke03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-sherbrooke03/anat/sub-sherbrooke03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-sherbrooke03/anat/sub-sherbrooke03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-sherbrooke03/anat/sub-sherbrooke03_space-other_T2star_gmlabel-SC_seg.nii.gz b/derivatives/labels/sub-sherbrooke03/anat/sub-sherbrooke03_space-other_T2star_gmlabel-SC_seg.nii.gz index bd17a4e8b0..ab45b9bcda 100644 --- a/derivatives/labels/sub-sherbrooke03/anat/sub-sherbrooke03_space-other_T2star_gmlabel-SC_seg.nii.gz +++ b/derivatives/labels/sub-sherbrooke03/anat/sub-sherbrooke03_space-other_T2star_gmlabel-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s55331--0bc9f2d037f907c2c74676141ff1b787a3bb0bd6f2137ff110b387c2766217c1.nii.gz +/annex/objects/SHA256E-s55353--e019e1c9a295b1b9e05b0c856c48b2f10db3bf5f53dd4a9c35e0a82a6c0f6f02.nii.gz diff --git a/derivatives/labels/sub-sherbrooke03/anat/sub-sherbrooke03_space-other_T2star_label-SC_seg.nii.gz b/derivatives/labels/sub-sherbrooke03/anat/sub-sherbrooke03_space-other_T2star_label-SC_seg.nii.gz index b558a60aac..1a2b818b13 100644 --- a/derivatives/labels/sub-sherbrooke03/anat/sub-sherbrooke03_space-other_T2star_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-sherbrooke03/anat/sub-sherbrooke03_space-other_T2star_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s8375--56baf75d8429796489c3249a3704f5aaf6288e90f18bed503ff7ba2f72f3198e.nii.gz +/annex/objects/SHA256E-s8396--2c4dfed15c75a7140bfb95acf1d4f00a777fc62653924e8bc752a0c002628c25.nii.gz diff --git a/derivatives/labels/sub-sherbrooke03/anat/sub-sherbrooke03_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-sherbrooke03/anat/sub-sherbrooke03_space-other_T2star_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-sherbrooke03/anat/sub-sherbrooke03_space-other_T2star_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-sherbrooke04/anat/sub-sherbrooke04_space-other_T1w_label-discs_dlabel.json b/derivatives/labels/sub-sherbrooke04/anat/sub-sherbrooke04_T1w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-sherbrooke04/anat/sub-sherbrooke04_space-other_T1w_label-discs_dlabel.json rename to derivatives/labels/sub-sherbrooke04/anat/sub-sherbrooke04_T1w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-sherbrooke04/anat/sub-sherbrooke04_space-other_T1w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-sherbrooke04/anat/sub-sherbrooke04_T1w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-sherbrooke04/anat/sub-sherbrooke04_space-other_T1w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-sherbrooke04/anat/sub-sherbrooke04_T1w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-sherbrooke04/anat/sub-sherbrooke04_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-sherbrooke04/anat/sub-sherbrooke04_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-sherbrooke04/anat/sub-sherbrooke04_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-sherbrooke04/anat/sub-sherbrooke04_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-sherbrooke04/anat/sub-sherbrooke04_T2star_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-sherbrooke04/anat/sub-sherbrooke04_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-sherbrooke04/anat/sub-sherbrooke04_T2star_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-sherbrooke04/anat/sub-sherbrooke04_space-other_T2w_label-discs_dlabel.json b/derivatives/labels/sub-sherbrooke04/anat/sub-sherbrooke04_T2w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-sherbrooke04/anat/sub-sherbrooke04_space-other_T2w_label-discs_dlabel.json rename to derivatives/labels/sub-sherbrooke04/anat/sub-sherbrooke04_T2w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-sherbrooke04/anat/sub-sherbrooke04_space-other_T2w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-sherbrooke04/anat/sub-sherbrooke04_T2w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-sherbrooke04/anat/sub-sherbrooke04_space-other_T2w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-sherbrooke04/anat/sub-sherbrooke04_T2w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-sherbrooke04/anat/sub-sherbrooke04_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-sherbrooke04/anat/sub-sherbrooke04_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-sherbrooke04/anat/sub-sherbrooke04_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-sherbrooke04/anat/sub-sherbrooke04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-sherbrooke04/anat/sub-sherbrooke04_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-sherbrooke04/anat/sub-sherbrooke04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-sherbrooke04/anat/sub-sherbrooke04_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-sherbrooke04/anat/sub-sherbrooke04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-sherbrooke04/anat/sub-sherbrooke04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-sherbrooke04/anat/sub-sherbrooke04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-sherbrooke04/anat/sub-sherbrooke04_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-sherbrooke04/anat/sub-sherbrooke04_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-sherbrooke04/anat/sub-sherbrooke04_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-sherbrooke04/anat/sub-sherbrooke04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-sherbrooke04/anat/sub-sherbrooke04_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-sherbrooke04/anat/sub-sherbrooke04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-sherbrooke04/anat/sub-sherbrooke04_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-sherbrooke04/anat/sub-sherbrooke04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-sherbrooke04/anat/sub-sherbrooke04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-sherbrooke04/anat/sub-sherbrooke04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-sherbrooke04/anat/sub-sherbrooke04_space-other_T2star_label-SC_seg.nii.gz b/derivatives/labels/sub-sherbrooke04/anat/sub-sherbrooke04_space-other_T2star_label-SC_seg.nii.gz index 9c0ed561f0..449b42484d 100644 --- a/derivatives/labels/sub-sherbrooke04/anat/sub-sherbrooke04_space-other_T2star_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-sherbrooke04/anat/sub-sherbrooke04_space-other_T2star_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s8240--7aa09df93d6756cb7584965e7316ee94d641eb5ea8d0ad8d47e5d7e3fb346107.nii.gz +/annex/objects/SHA256E-s8261--6b112a923ff24cce0ca49546c7d1fa8a96d6a66614a4f2e14ce823c808fd72fc.nii.gz diff --git a/derivatives/labels/sub-sherbrooke04/anat/sub-sherbrooke04_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-sherbrooke04/anat/sub-sherbrooke04_space-other_T2star_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-sherbrooke04/anat/sub-sherbrooke04_space-other_T2star_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-sherbrooke05/anat/sub-sherbrooke05_space-other_T1w_label-discs_dlabel.json b/derivatives/labels/sub-sherbrooke05/anat/sub-sherbrooke05_T1w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-sherbrooke05/anat/sub-sherbrooke05_space-other_T1w_label-discs_dlabel.json rename to derivatives/labels/sub-sherbrooke05/anat/sub-sherbrooke05_T1w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-sherbrooke05/anat/sub-sherbrooke05_space-other_T1w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-sherbrooke05/anat/sub-sherbrooke05_T1w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-sherbrooke05/anat/sub-sherbrooke05_space-other_T1w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-sherbrooke05/anat/sub-sherbrooke05_T1w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-sherbrooke05/anat/sub-sherbrooke05_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-sherbrooke05/anat/sub-sherbrooke05_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-sherbrooke05/anat/sub-sherbrooke05_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-sherbrooke05/anat/sub-sherbrooke05_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-sherbrooke05/anat/sub-sherbrooke05_T2star_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-sherbrooke05/anat/sub-sherbrooke05_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-sherbrooke05/anat/sub-sherbrooke05_T2star_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-sherbrooke05/anat/sub-sherbrooke05_space-other_T2w_label-discs_dlabel.json b/derivatives/labels/sub-sherbrooke05/anat/sub-sherbrooke05_T2w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-sherbrooke05/anat/sub-sherbrooke05_space-other_T2w_label-discs_dlabel.json rename to derivatives/labels/sub-sherbrooke05/anat/sub-sherbrooke05_T2w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-sherbrooke05/anat/sub-sherbrooke05_space-other_T2w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-sherbrooke05/anat/sub-sherbrooke05_T2w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-sherbrooke05/anat/sub-sherbrooke05_space-other_T2w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-sherbrooke05/anat/sub-sherbrooke05_T2w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-sherbrooke05/anat/sub-sherbrooke05_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-sherbrooke05/anat/sub-sherbrooke05_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-sherbrooke05/anat/sub-sherbrooke05_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-sherbrooke05/anat/sub-sherbrooke05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-sherbrooke05/anat/sub-sherbrooke05_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-sherbrooke05/anat/sub-sherbrooke05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-sherbrooke05/anat/sub-sherbrooke05_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-sherbrooke05/anat/sub-sherbrooke05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-sherbrooke05/anat/sub-sherbrooke05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-sherbrooke05/anat/sub-sherbrooke05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-sherbrooke05/anat/sub-sherbrooke05_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-sherbrooke05/anat/sub-sherbrooke05_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-sherbrooke05/anat/sub-sherbrooke05_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-sherbrooke05/anat/sub-sherbrooke05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-sherbrooke05/anat/sub-sherbrooke05_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-sherbrooke05/anat/sub-sherbrooke05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-sherbrooke05/anat/sub-sherbrooke05_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-sherbrooke05/anat/sub-sherbrooke05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-sherbrooke05/anat/sub-sherbrooke05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-sherbrooke05/anat/sub-sherbrooke05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-sherbrooke05/anat/sub-sherbrooke05_space-other_T2star_label-SC_seg.nii.gz b/derivatives/labels/sub-sherbrooke05/anat/sub-sherbrooke05_space-other_T2star_label-SC_seg.nii.gz index 15500b1c96..20cbf4479d 100644 --- a/derivatives/labels/sub-sherbrooke05/anat/sub-sherbrooke05_space-other_T2star_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-sherbrooke05/anat/sub-sherbrooke05_space-other_T2star_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s8256--1d2d9583a07e02bbc8ed4aded71865d44285b5841afed03bf5420c3c54b0ac66.nii.gz +/annex/objects/SHA256E-s8277--57eae6c9021e4b5afa5bac2b10ae08bacdee6b27d36be66d0662c8ae0e5ef3eb.nii.gz diff --git a/derivatives/labels/sub-sherbrooke05/anat/sub-sherbrooke05_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-sherbrooke05/anat/sub-sherbrooke05_space-other_T2star_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-sherbrooke05/anat/sub-sherbrooke05_space-other_T2star_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-sherbrooke06/anat/sub-sherbrooke06_space-other_T1w_label-discs_dlabel.json b/derivatives/labels/sub-sherbrooke06/anat/sub-sherbrooke06_T1w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-sherbrooke06/anat/sub-sherbrooke06_space-other_T1w_label-discs_dlabel.json rename to derivatives/labels/sub-sherbrooke06/anat/sub-sherbrooke06_T1w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-sherbrooke06/anat/sub-sherbrooke06_space-other_T1w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-sherbrooke06/anat/sub-sherbrooke06_T1w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-sherbrooke06/anat/sub-sherbrooke06_space-other_T1w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-sherbrooke06/anat/sub-sherbrooke06_T1w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-sherbrooke06/anat/sub-sherbrooke06_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-sherbrooke06/anat/sub-sherbrooke06_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-sherbrooke06/anat/sub-sherbrooke06_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-sherbrooke06/anat/sub-sherbrooke06_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-sherbrooke06/anat/sub-sherbrooke06_T2star_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-sherbrooke06/anat/sub-sherbrooke06_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-sherbrooke06/anat/sub-sherbrooke06_T2star_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-sherbrooke06/anat/sub-sherbrooke06_space-other_T2w_label-discs_dlabel.json b/derivatives/labels/sub-sherbrooke06/anat/sub-sherbrooke06_T2w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-sherbrooke06/anat/sub-sherbrooke06_space-other_T2w_label-discs_dlabel.json rename to derivatives/labels/sub-sherbrooke06/anat/sub-sherbrooke06_T2w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-sherbrooke06/anat/sub-sherbrooke06_space-other_T2w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-sherbrooke06/anat/sub-sherbrooke06_T2w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-sherbrooke06/anat/sub-sherbrooke06_space-other_T2w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-sherbrooke06/anat/sub-sherbrooke06_T2w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-sherbrooke06/anat/sub-sherbrooke06_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-sherbrooke06/anat/sub-sherbrooke06_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-sherbrooke06/anat/sub-sherbrooke06_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-sherbrooke06/anat/sub-sherbrooke06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-sherbrooke06/anat/sub-sherbrooke06_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-sherbrooke06/anat/sub-sherbrooke06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-sherbrooke06/anat/sub-sherbrooke06_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-sherbrooke06/anat/sub-sherbrooke06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-sherbrooke06/anat/sub-sherbrooke06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-sherbrooke06/anat/sub-sherbrooke06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-sherbrooke06/anat/sub-sherbrooke06_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-sherbrooke06/anat/sub-sherbrooke06_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-sherbrooke06/anat/sub-sherbrooke06_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-sherbrooke06/anat/sub-sherbrooke06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-sherbrooke06/anat/sub-sherbrooke06_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-sherbrooke06/anat/sub-sherbrooke06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-sherbrooke06/anat/sub-sherbrooke06_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-sherbrooke06/anat/sub-sherbrooke06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-sherbrooke06/anat/sub-sherbrooke06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-sherbrooke06/anat/sub-sherbrooke06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-sherbrooke06/anat/sub-sherbrooke06_space-other_T2star_label-SC_seg.nii.gz b/derivatives/labels/sub-sherbrooke06/anat/sub-sherbrooke06_space-other_T2star_label-SC_seg.nii.gz index 283a28642b..53b12d69b2 100644 --- a/derivatives/labels/sub-sherbrooke06/anat/sub-sherbrooke06_space-other_T2star_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-sherbrooke06/anat/sub-sherbrooke06_space-other_T2star_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s8261--0b250d5f9e9d8ad7c96f184865796da0d40503f5ba9dd4331744a3e29d378d01.nii.gz +/annex/objects/SHA256E-s8282--51c04b394f4fe9a3489fc61f551c98a7824933a81cd4bfc613863c86e3aa46a7.nii.gz diff --git a/derivatives/labels/sub-sherbrooke06/anat/sub-sherbrooke06_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-sherbrooke06/anat/sub-sherbrooke06_space-other_T2star_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-sherbrooke06/anat/sub-sherbrooke06_space-other_T2star_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-sherbrooke07/anat/sub-sherbrooke07_space-other_T1w_label-discs_dlabel.json b/derivatives/labels/sub-sherbrooke07/anat/sub-sherbrooke07_T1w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-sherbrooke07/anat/sub-sherbrooke07_space-other_T1w_label-discs_dlabel.json rename to derivatives/labels/sub-sherbrooke07/anat/sub-sherbrooke07_T1w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-sherbrooke07/anat/sub-sherbrooke07_space-other_T1w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-sherbrooke07/anat/sub-sherbrooke07_T1w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-sherbrooke07/anat/sub-sherbrooke07_space-other_T1w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-sherbrooke07/anat/sub-sherbrooke07_T1w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-sherbrooke07/anat/sub-sherbrooke07_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-sherbrooke07/anat/sub-sherbrooke07_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-sherbrooke07/anat/sub-sherbrooke07_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-sherbrooke07/anat/sub-sherbrooke07_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-sherbrooke07/anat/sub-sherbrooke07_T2star_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-sherbrooke07/anat/sub-sherbrooke07_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-sherbrooke07/anat/sub-sherbrooke07_T2star_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-sherbrooke07/anat/sub-sherbrooke07_space-other_T2w_label-discs_dlabel.json b/derivatives/labels/sub-sherbrooke07/anat/sub-sherbrooke07_T2w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-sherbrooke07/anat/sub-sherbrooke07_space-other_T2w_label-discs_dlabel.json rename to derivatives/labels/sub-sherbrooke07/anat/sub-sherbrooke07_T2w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-sherbrooke07/anat/sub-sherbrooke07_space-other_T2w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-sherbrooke07/anat/sub-sherbrooke07_T2w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-sherbrooke07/anat/sub-sherbrooke07_space-other_T2w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-sherbrooke07/anat/sub-sherbrooke07_T2w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-sherbrooke07/anat/sub-sherbrooke07_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-sherbrooke07/anat/sub-sherbrooke07_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-sherbrooke07/anat/sub-sherbrooke07_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-sherbrooke07/anat/sub-sherbrooke07_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-sherbrooke07/anat/sub-sherbrooke07_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-sherbrooke07/anat/sub-sherbrooke07_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-sherbrooke07/anat/sub-sherbrooke07_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-sherbrooke07/anat/sub-sherbrooke07_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-sherbrooke07/anat/sub-sherbrooke07_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-sherbrooke07/anat/sub-sherbrooke07_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-sherbrooke07/anat/sub-sherbrooke07_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-sherbrooke07/anat/sub-sherbrooke07_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-sherbrooke07/anat/sub-sherbrooke07_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-sherbrooke07/anat/sub-sherbrooke07_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-sherbrooke07/anat/sub-sherbrooke07_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-sherbrooke07/anat/sub-sherbrooke07_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-sherbrooke07/anat/sub-sherbrooke07_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-sherbrooke07/anat/sub-sherbrooke07_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-sherbrooke07/anat/sub-sherbrooke07_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-sherbrooke07/anat/sub-sherbrooke07_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-sherbrooke07/anat/sub-sherbrooke07_space-other_T2star_label-SC_seg.nii.gz b/derivatives/labels/sub-sherbrooke07/anat/sub-sherbrooke07_space-other_T2star_label-SC_seg.nii.gz index 0bca2943b1..da2d572a36 100644 --- a/derivatives/labels/sub-sherbrooke07/anat/sub-sherbrooke07_space-other_T2star_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-sherbrooke07/anat/sub-sherbrooke07_space-other_T2star_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s8237--f5275ee41286b56710a598d8433950ec4a9b6b8700f818e87f410ba4b510b2f9.nii.gz +/annex/objects/SHA256E-s8258--fdf7503686be7ca842926687f1940a4b673e28d39efa8acc1f566ba5affcea94.nii.gz diff --git a/derivatives/labels/sub-sherbrooke07/anat/sub-sherbrooke07_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-sherbrooke07/anat/sub-sherbrooke07_space-other_T2star_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-sherbrooke07/anat/sub-sherbrooke07_space-other_T2star_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-stanford01/anat/sub-stanford01_space-other_T1w_label-discs_dlabel.json b/derivatives/labels/sub-stanford01/anat/sub-stanford01_T1w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-stanford01/anat/sub-stanford01_space-other_T1w_label-discs_dlabel.json rename to derivatives/labels/sub-stanford01/anat/sub-stanford01_T1w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-stanford01/anat/sub-stanford01_space-other_T1w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-stanford01/anat/sub-stanford01_T1w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-stanford01/anat/sub-stanford01_space-other_T1w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-stanford01/anat/sub-stanford01_T1w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-stanford01/anat/sub-stanford01_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-stanford01/anat/sub-stanford01_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-stanford01/anat/sub-stanford01_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-stanford01/anat/sub-stanford01_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-stanford01/anat/sub-stanford01_T2star_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-stanford01/anat/sub-stanford01_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-stanford01/anat/sub-stanford01_T2star_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-stanford01/anat/sub-stanford01_space-other_T2w_label-discs_dlabel.json b/derivatives/labels/sub-stanford01/anat/sub-stanford01_T2w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-stanford01/anat/sub-stanford01_space-other_T2w_label-discs_dlabel.json rename to derivatives/labels/sub-stanford01/anat/sub-stanford01_T2w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-stanford01/anat/sub-stanford01_space-other_T2w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-stanford01/anat/sub-stanford01_T2w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-stanford01/anat/sub-stanford01_space-other_T2w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-stanford01/anat/sub-stanford01_T2w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-stanford01/anat/sub-stanford01_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-stanford01/anat/sub-stanford01_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-stanford01/anat/sub-stanford01_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-stanford01/anat/sub-stanford01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-stanford01/anat/sub-stanford01_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-stanford01/anat/sub-stanford01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-stanford01/anat/sub-stanford01_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-stanford01/anat/sub-stanford01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-stanford01/anat/sub-stanford01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-stanford01/anat/sub-stanford01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-stanford01/anat/sub-stanford01_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-stanford01/anat/sub-stanford01_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-stanford01/anat/sub-stanford01_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-stanford01/anat/sub-stanford01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-stanford01/anat/sub-stanford01_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-stanford01/anat/sub-stanford01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-stanford01/anat/sub-stanford01_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-stanford01/anat/sub-stanford01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-stanford01/anat/sub-stanford01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-stanford01/anat/sub-stanford01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-stanford01/anat/sub-stanford01_space-other_T2star_label-SC_seg.nii.gz b/derivatives/labels/sub-stanford01/anat/sub-stanford01_space-other_T2star_label-SC_seg.nii.gz index dcc03c5d92..313c9c938c 100644 --- a/derivatives/labels/sub-stanford01/anat/sub-stanford01_space-other_T2star_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-stanford01/anat/sub-stanford01_space-other_T2star_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s6901--b1d63c81b6c1305afd2776852a481003b3fbf9d7641a4c7ac07dba0f4fd39e6f.nii.gz +/annex/objects/SHA256E-s28500--94714a9a8451d5a797a6ab9a248c229e9975750c10700fa4dcb813bc4981951f.nii.gz diff --git a/derivatives/labels/sub-stanford01/anat/sub-stanford01_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-stanford01/anat/sub-stanford01_space-other_T2star_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-stanford01/anat/sub-stanford01_space-other_T2star_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-stanford02/anat/sub-stanford02_space-other_T1w_label-discs_dlabel.json b/derivatives/labels/sub-stanford02/anat/sub-stanford02_T1w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-stanford02/anat/sub-stanford02_space-other_T1w_label-discs_dlabel.json rename to derivatives/labels/sub-stanford02/anat/sub-stanford02_T1w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-stanford02/anat/sub-stanford02_space-other_T1w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-stanford02/anat/sub-stanford02_T1w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-stanford02/anat/sub-stanford02_space-other_T1w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-stanford02/anat/sub-stanford02_T1w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-stanford02/anat/sub-stanford02_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-stanford02/anat/sub-stanford02_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-stanford02/anat/sub-stanford02_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-stanford02/anat/sub-stanford02_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-stanford02/anat/sub-stanford02_T2star_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-stanford02/anat/sub-stanford02_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-stanford02/anat/sub-stanford02_T2star_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-stanford02/anat/sub-stanford02_space-other_T2w_label-discs_dlabel.json b/derivatives/labels/sub-stanford02/anat/sub-stanford02_T2w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-stanford02/anat/sub-stanford02_space-other_T2w_label-discs_dlabel.json rename to derivatives/labels/sub-stanford02/anat/sub-stanford02_T2w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-stanford02/anat/sub-stanford02_space-other_T2w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-stanford02/anat/sub-stanford02_T2w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-stanford02/anat/sub-stanford02_space-other_T2w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-stanford02/anat/sub-stanford02_T2w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-stanford02/anat/sub-stanford02_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-stanford02/anat/sub-stanford02_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-stanford02/anat/sub-stanford02_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-stanford02/anat/sub-stanford02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-stanford02/anat/sub-stanford02_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-stanford02/anat/sub-stanford02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-stanford02/anat/sub-stanford02_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-stanford02/anat/sub-stanford02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-stanford02/anat/sub-stanford02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-stanford02/anat/sub-stanford02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-stanford02/anat/sub-stanford02_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-stanford02/anat/sub-stanford02_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-stanford02/anat/sub-stanford02_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-stanford02/anat/sub-stanford02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-stanford02/anat/sub-stanford02_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-stanford02/anat/sub-stanford02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-stanford02/anat/sub-stanford02_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-stanford02/anat/sub-stanford02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-stanford02/anat/sub-stanford02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-stanford02/anat/sub-stanford02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-stanford02/anat/sub-stanford02_space-other_T2star_label-SC_seg.nii.gz b/derivatives/labels/sub-stanford02/anat/sub-stanford02_space-other_T2star_label-SC_seg.nii.gz index 68e1fa1a04..6ca6329b9f 100644 --- a/derivatives/labels/sub-stanford02/anat/sub-stanford02_space-other_T2star_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-stanford02/anat/sub-stanford02_space-other_T2star_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s14887--70c4db8208ccdf420fae27a082e48e77220b557310179b811948f9dc6f068405.nii.gz +/annex/objects/SHA256E-s14908--28ebcd6d09a3addea79b2b7b7fa5fb636baa0349fc0da2891dc844e39f823b79.nii.gz diff --git a/derivatives/labels/sub-stanford02/anat/sub-stanford02_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-stanford02/anat/sub-stanford02_space-other_T2star_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-stanford02/anat/sub-stanford02_space-other_T2star_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-stanford03/anat/sub-stanford03_space-other_T1w_label-discs_dlabel.json b/derivatives/labels/sub-stanford03/anat/sub-stanford03_T1w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-stanford03/anat/sub-stanford03_space-other_T1w_label-discs_dlabel.json rename to derivatives/labels/sub-stanford03/anat/sub-stanford03_T1w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-stanford03/anat/sub-stanford03_space-other_T1w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-stanford03/anat/sub-stanford03_T1w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-stanford03/anat/sub-stanford03_space-other_T1w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-stanford03/anat/sub-stanford03_T1w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-stanford03/anat/sub-stanford03_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-stanford03/anat/sub-stanford03_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-stanford03/anat/sub-stanford03_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-stanford03/anat/sub-stanford03_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-stanford03/anat/sub-stanford03_T2star_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-stanford03/anat/sub-stanford03_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-stanford03/anat/sub-stanford03_T2star_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-stanford03/anat/sub-stanford03_space-other_T2w_label-discs_dlabel.json b/derivatives/labels/sub-stanford03/anat/sub-stanford03_T2w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-stanford03/anat/sub-stanford03_space-other_T2w_label-discs_dlabel.json rename to derivatives/labels/sub-stanford03/anat/sub-stanford03_T2w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-stanford03/anat/sub-stanford03_space-other_T2w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-stanford03/anat/sub-stanford03_T2w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-stanford03/anat/sub-stanford03_space-other_T2w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-stanford03/anat/sub-stanford03_T2w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-stanford03/anat/sub-stanford03_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-stanford03/anat/sub-stanford03_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-stanford03/anat/sub-stanford03_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-stanford03/anat/sub-stanford03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-stanford03/anat/sub-stanford03_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-stanford03/anat/sub-stanford03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-stanford03/anat/sub-stanford03_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-stanford03/anat/sub-stanford03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-stanford03/anat/sub-stanford03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-stanford03/anat/sub-stanford03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-stanford03/anat/sub-stanford03_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-stanford03/anat/sub-stanford03_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-stanford03/anat/sub-stanford03_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-stanford03/anat/sub-stanford03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-stanford03/anat/sub-stanford03_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-stanford03/anat/sub-stanford03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-stanford03/anat/sub-stanford03_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-stanford03/anat/sub-stanford03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-stanford03/anat/sub-stanford03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-stanford03/anat/sub-stanford03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-stanford03/anat/sub-stanford03_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.json b/derivatives/labels/sub-stanford03/anat/sub-stanford03_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.json new file mode 100644 index 0000000000..e537a137e5 --- /dev/null +++ b/derivatives/labels/sub-stanford03/anat/sub-stanford03_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.json @@ -0,0 +1,11 @@ +{ + "SpatialReference": { + "Orientation": "RPI", + "Resampling": "1x1x1" + }, + "GeneratedBy": [ + { + "Description": "Manual label of C2 and C5 mid-vertebrae, at the center of the spinal cord." + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-stanford03/anat/sub-stanford03_space-other_T1w_RPI_r_labels-manual.nii.gz b/derivatives/labels/sub-stanford03/anat/sub-stanford03_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-stanford03/anat/sub-stanford03_space-other_T1w_RPI_r_labels-manual.nii.gz rename to derivatives/labels/sub-stanford03/anat/sub-stanford03_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.nii.gz diff --git a/derivatives/labels/sub-stanford03/anat/sub-stanford03_space-other_T2star_label-SC_seg.nii.gz b/derivatives/labels/sub-stanford03/anat/sub-stanford03_space-other_T2star_label-SC_seg.nii.gz index d93e41485d..b6320b8c5c 100644 --- a/derivatives/labels/sub-stanford03/anat/sub-stanford03_space-other_T2star_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-stanford03/anat/sub-stanford03_space-other_T2star_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s14828--0b9b044786781638bb83519a8ac8069c0068fe39bd4a81798d08e096d0e8df50.nii.gz +/annex/objects/SHA256E-s14849--c63765f3f6d5d13c489435871aa0f3bbfc3d068eb5e21559cbb57f30fe881f47.nii.gz diff --git a/derivatives/labels/sub-stanford03/anat/sub-stanford03_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-stanford03/anat/sub-stanford03_space-other_T2star_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-stanford03/anat/sub-stanford03_space-other_T2star_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-stanford04/anat/sub-stanford04_space-other_T1w_label-discs_dlabel.json b/derivatives/labels/sub-stanford04/anat/sub-stanford04_T1w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-stanford04/anat/sub-stanford04_space-other_T1w_label-discs_dlabel.json rename to derivatives/labels/sub-stanford04/anat/sub-stanford04_T1w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-stanford04/anat/sub-stanford04_space-other_T1w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-stanford04/anat/sub-stanford04_T1w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-stanford04/anat/sub-stanford04_space-other_T1w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-stanford04/anat/sub-stanford04_T1w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-stanford04/anat/sub-stanford04_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-stanford04/anat/sub-stanford04_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-stanford04/anat/sub-stanford04_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-stanford04/anat/sub-stanford04_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-stanford04/anat/sub-stanford04_T2star_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-stanford04/anat/sub-stanford04_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-stanford04/anat/sub-stanford04_T2star_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-stanford04/anat/sub-stanford04_space-other_T2w_label-discs_dlabel.json b/derivatives/labels/sub-stanford04/anat/sub-stanford04_T2w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-stanford04/anat/sub-stanford04_space-other_T2w_label-discs_dlabel.json rename to derivatives/labels/sub-stanford04/anat/sub-stanford04_T2w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-stanford04/anat/sub-stanford04_space-other_T2w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-stanford04/anat/sub-stanford04_T2w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-stanford04/anat/sub-stanford04_space-other_T2w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-stanford04/anat/sub-stanford04_T2w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-stanford04/anat/sub-stanford04_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-stanford04/anat/sub-stanford04_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-stanford04/anat/sub-stanford04_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-stanford04/anat/sub-stanford04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-stanford04/anat/sub-stanford04_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-stanford04/anat/sub-stanford04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-stanford04/anat/sub-stanford04_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-stanford04/anat/sub-stanford04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-stanford04/anat/sub-stanford04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-stanford04/anat/sub-stanford04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-stanford04/anat/sub-stanford04_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-stanford04/anat/sub-stanford04_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-stanford04/anat/sub-stanford04_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-stanford04/anat/sub-stanford04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-stanford04/anat/sub-stanford04_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-stanford04/anat/sub-stanford04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-stanford04/anat/sub-stanford04_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-stanford04/anat/sub-stanford04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-stanford04/anat/sub-stanford04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-stanford04/anat/sub-stanford04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-stanford04/anat/sub-stanford04_space-other_T2star_label-SC_seg.nii.gz b/derivatives/labels/sub-stanford04/anat/sub-stanford04_space-other_T2star_label-SC_seg.nii.gz index 989133ffa4..695a807fd7 100644 --- a/derivatives/labels/sub-stanford04/anat/sub-stanford04_space-other_T2star_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-stanford04/anat/sub-stanford04_space-other_T2star_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s6776--8bbf6a4fa35437069dbc3d9ca9823191586e392144f20eb4bb05ba8215e8914f.nii.gz +/annex/objects/SHA256E-s28321--79dd60223dd88920d1d740f202cfc400cffe36009a7924ef5a5eaf050b580468.nii.gz diff --git a/derivatives/labels/sub-stanford04/anat/sub-stanford04_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-stanford04/anat/sub-stanford04_space-other_T2star_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-stanford04/anat/sub-stanford04_space-other_T2star_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-stanford05/anat/sub-stanford05_space-other_T1w_label-discs_dlabel.json b/derivatives/labels/sub-stanford05/anat/sub-stanford05_T1w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-stanford05/anat/sub-stanford05_space-other_T1w_label-discs_dlabel.json rename to derivatives/labels/sub-stanford05/anat/sub-stanford05_T1w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-stanford05/anat/sub-stanford05_space-other_T1w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-stanford05/anat/sub-stanford05_T1w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-stanford05/anat/sub-stanford05_space-other_T1w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-stanford05/anat/sub-stanford05_T1w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-stanford05/anat/sub-stanford05_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-stanford05/anat/sub-stanford05_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-stanford05/anat/sub-stanford05_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-stanford05/anat/sub-stanford05_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-stanford05/anat/sub-stanford05_T2star_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-stanford05/anat/sub-stanford05_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-stanford05/anat/sub-stanford05_T2star_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-stanford05/anat/sub-stanford05_space-other_T2w_label-discs_dlabel.json b/derivatives/labels/sub-stanford05/anat/sub-stanford05_T2w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-stanford05/anat/sub-stanford05_space-other_T2w_label-discs_dlabel.json rename to derivatives/labels/sub-stanford05/anat/sub-stanford05_T2w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-stanford05/anat/sub-stanford05_space-other_T2w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-stanford05/anat/sub-stanford05_T2w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-stanford05/anat/sub-stanford05_space-other_T2w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-stanford05/anat/sub-stanford05_T2w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-stanford05/anat/sub-stanford05_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-stanford05/anat/sub-stanford05_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-stanford05/anat/sub-stanford05_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-stanford05/anat/sub-stanford05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-stanford05/anat/sub-stanford05_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-stanford05/anat/sub-stanford05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-stanford05/anat/sub-stanford05_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-stanford05/anat/sub-stanford05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-stanford05/anat/sub-stanford05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-stanford05/anat/sub-stanford05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-stanford05/anat/sub-stanford05_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-stanford05/anat/sub-stanford05_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-stanford05/anat/sub-stanford05_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-stanford05/anat/sub-stanford05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-stanford05/anat/sub-stanford05_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-stanford05/anat/sub-stanford05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-stanford05/anat/sub-stanford05_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-stanford05/anat/sub-stanford05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-stanford05/anat/sub-stanford05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-stanford05/anat/sub-stanford05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-stanford05/anat/sub-stanford05_space-other_T2star_label-SC_seg.nii.gz b/derivatives/labels/sub-stanford05/anat/sub-stanford05_space-other_T2star_label-SC_seg.nii.gz index bedda54a0f..503da769f6 100644 --- a/derivatives/labels/sub-stanford05/anat/sub-stanford05_space-other_T2star_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-stanford05/anat/sub-stanford05_space-other_T2star_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s14910--7f61a68b6e9adc2f582c9673edb584e27d4f068845a32cdd61921145c08b14c1.nii.gz +/annex/objects/SHA256E-s14931--250502021260c20c3c6a5c9d580ba4e92daa91a4ed38bb4a7fdf91aa5674d13a.nii.gz diff --git a/derivatives/labels/sub-stanford05/anat/sub-stanford05_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-stanford05/anat/sub-stanford05_space-other_T2star_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-stanford05/anat/sub-stanford05_space-other_T2star_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-stanford06/anat/sub-stanford06_space-other_T1w_label-discs_dlabel.json b/derivatives/labels/sub-stanford06/anat/sub-stanford06_T1w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-stanford06/anat/sub-stanford06_space-other_T1w_label-discs_dlabel.json rename to derivatives/labels/sub-stanford06/anat/sub-stanford06_T1w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-stanford06/anat/sub-stanford06_space-other_T1w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-stanford06/anat/sub-stanford06_T1w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-stanford06/anat/sub-stanford06_space-other_T1w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-stanford06/anat/sub-stanford06_T1w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-stanford06/anat/sub-stanford06_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-stanford06/anat/sub-stanford06_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-stanford06/anat/sub-stanford06_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-stanford06/anat/sub-stanford06_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-stanford06/anat/sub-stanford06_T2star_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-stanford06/anat/sub-stanford06_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-stanford06/anat/sub-stanford06_T2star_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-stanford06/anat/sub-stanford06_space-other_T2w_label-discs_dlabel.json b/derivatives/labels/sub-stanford06/anat/sub-stanford06_T2w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-stanford06/anat/sub-stanford06_space-other_T2w_label-discs_dlabel.json rename to derivatives/labels/sub-stanford06/anat/sub-stanford06_T2w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-stanford06/anat/sub-stanford06_space-other_T2w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-stanford06/anat/sub-stanford06_T2w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-stanford06/anat/sub-stanford06_space-other_T2w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-stanford06/anat/sub-stanford06_T2w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-stanford06/anat/sub-stanford06_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-stanford06/anat/sub-stanford06_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-stanford06/anat/sub-stanford06_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-stanford06/anat/sub-stanford06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-stanford06/anat/sub-stanford06_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-stanford06/anat/sub-stanford06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-stanford06/anat/sub-stanford06_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-stanford06/anat/sub-stanford06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-stanford06/anat/sub-stanford06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-stanford06/anat/sub-stanford06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-stanford06/anat/sub-stanford06_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-stanford06/anat/sub-stanford06_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-stanford06/anat/sub-stanford06_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-stanford06/anat/sub-stanford06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-stanford06/anat/sub-stanford06_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-stanford06/anat/sub-stanford06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-stanford06/anat/sub-stanford06_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-stanford06/anat/sub-stanford06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-stanford06/anat/sub-stanford06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-stanford06/anat/sub-stanford06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-stanford06/anat/sub-stanford06_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.json b/derivatives/labels/sub-stanford06/anat/sub-stanford06_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.json new file mode 100644 index 0000000000..e537a137e5 --- /dev/null +++ b/derivatives/labels/sub-stanford06/anat/sub-stanford06_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.json @@ -0,0 +1,11 @@ +{ + "SpatialReference": { + "Orientation": "RPI", + "Resampling": "1x1x1" + }, + "GeneratedBy": [ + { + "Description": "Manual label of C2 and C5 mid-vertebrae, at the center of the spinal cord." + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-stanford06/anat/sub-stanford06_space-other_T1w_RPI_r_labels-manual.nii.gz b/derivatives/labels/sub-stanford06/anat/sub-stanford06_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-stanford06/anat/sub-stanford06_space-other_T1w_RPI_r_labels-manual.nii.gz rename to derivatives/labels/sub-stanford06/anat/sub-stanford06_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.nii.gz diff --git a/derivatives/labels/sub-stanford06/anat/sub-stanford06_space-other_T2star_gmlabel-SC_seg.nii.gz b/derivatives/labels/sub-stanford06/anat/sub-stanford06_space-other_T2star_gmlabel-SC_seg.nii.gz index 08c0f904c6..f6a580f5f0 100644 --- a/derivatives/labels/sub-stanford06/anat/sub-stanford06_space-other_T2star_gmlabel-SC_seg.nii.gz +++ b/derivatives/labels/sub-stanford06/anat/sub-stanford06_space-other_T2star_gmlabel-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s107012--b1b24b76e66301798929a3a1449419499ef628aed2fa6f7773904dce5a4344a5.nii.gz +/annex/objects/SHA256E-s107018--9718f8143a620f78d061d53b51fed17d47bcad74c405176a5b79aaeca0eb9b09.nii.gz diff --git a/derivatives/labels/sub-stanford06/anat/sub-stanford06_space-other_T2star_label-SC_seg.nii.gz b/derivatives/labels/sub-stanford06/anat/sub-stanford06_space-other_T2star_label-SC_seg.nii.gz index e6ac29e5ee..4b59ae5a72 100644 --- a/derivatives/labels/sub-stanford06/anat/sub-stanford06_space-other_T2star_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-stanford06/anat/sub-stanford06_space-other_T2star_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s6746--428925b9867ac3aa44f5f05d9f8971c09569b4695ce1bd2faf8487621795410a.nii.gz +/annex/objects/SHA256E-s28239--96c2a8ff22bf853b46a926c7d59a1d778f84585d1e9bfa21dcfd5b22d346da64.nii.gz diff --git a/derivatives/labels/sub-stanford06/anat/sub-stanford06_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-stanford06/anat/sub-stanford06_space-other_T2star_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-stanford06/anat/sub-stanford06_space-other_T2star_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-strasbourg01/anat/sub-strasbourg01_space-other_T1w_label-discs_dlabel.json b/derivatives/labels/sub-strasbourg01/anat/sub-strasbourg01_T1w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-strasbourg01/anat/sub-strasbourg01_space-other_T1w_label-discs_dlabel.json rename to derivatives/labels/sub-strasbourg01/anat/sub-strasbourg01_T1w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-strasbourg01/anat/sub-strasbourg01_space-other_T1w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-strasbourg01/anat/sub-strasbourg01_T1w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-strasbourg01/anat/sub-strasbourg01_space-other_T1w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-strasbourg01/anat/sub-strasbourg01_T1w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-strasbourg01/anat/sub-strasbourg01_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-strasbourg01/anat/sub-strasbourg01_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-strasbourg01/anat/sub-strasbourg01_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-strasbourg01/anat/sub-strasbourg01_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-strasbourg01/anat/sub-strasbourg01_T2star_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-strasbourg01/anat/sub-strasbourg01_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-strasbourg01/anat/sub-strasbourg01_T2star_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-strasbourg01/anat/sub-strasbourg01_space-other_T2w_label-discs_dlabel.json b/derivatives/labels/sub-strasbourg01/anat/sub-strasbourg01_T2w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-strasbourg01/anat/sub-strasbourg01_space-other_T2w_label-discs_dlabel.json rename to derivatives/labels/sub-strasbourg01/anat/sub-strasbourg01_T2w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-strasbourg01/anat/sub-strasbourg01_space-other_T2w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-strasbourg01/anat/sub-strasbourg01_T2w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-strasbourg01/anat/sub-strasbourg01_space-other_T2w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-strasbourg01/anat/sub-strasbourg01_T2w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-strasbourg01/anat/sub-strasbourg01_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-strasbourg01/anat/sub-strasbourg01_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-strasbourg01/anat/sub-strasbourg01_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-strasbourg01/anat/sub-strasbourg01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-strasbourg01/anat/sub-strasbourg01_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-strasbourg01/anat/sub-strasbourg01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-strasbourg01/anat/sub-strasbourg01_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-strasbourg01/anat/sub-strasbourg01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-strasbourg01/anat/sub-strasbourg01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-strasbourg01/anat/sub-strasbourg01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-strasbourg01/anat/sub-strasbourg01_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-strasbourg01/anat/sub-strasbourg01_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-strasbourg01/anat/sub-strasbourg01_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-strasbourg01/anat/sub-strasbourg01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-strasbourg01/anat/sub-strasbourg01_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-strasbourg01/anat/sub-strasbourg01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-strasbourg01/anat/sub-strasbourg01_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-strasbourg01/anat/sub-strasbourg01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-strasbourg01/anat/sub-strasbourg01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-strasbourg01/anat/sub-strasbourg01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-strasbourg01/anat/sub-strasbourg01_space-other_T2star_label-SC_seg.nii.gz b/derivatives/labels/sub-strasbourg01/anat/sub-strasbourg01_space-other_T2star_label-SC_seg.nii.gz index a870712c57..d5daf1a632 100644 --- a/derivatives/labels/sub-strasbourg01/anat/sub-strasbourg01_space-other_T2star_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-strasbourg01/anat/sub-strasbourg01_space-other_T2star_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s14950--94710a538909b4455e05f78abaccb46fdcd5ab26b4065aeaa9e4f2b4cc52da0e.nii.gz +/annex/objects/SHA256E-s14971--0b5bfb0d433fee9eebfbfba1ab4ddc6e7cb7f1692900d55b83fcf5cae9af7030.nii.gz diff --git a/derivatives/labels/sub-strasbourg01/anat/sub-strasbourg01_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-strasbourg01/anat/sub-strasbourg01_space-other_T2star_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-strasbourg01/anat/sub-strasbourg01_space-other_T2star_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-strasbourg02/anat/sub-strasbourg02_space-other_T1w_label-discs_dlabel.json b/derivatives/labels/sub-strasbourg02/anat/sub-strasbourg02_T1w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-strasbourg02/anat/sub-strasbourg02_space-other_T1w_label-discs_dlabel.json rename to derivatives/labels/sub-strasbourg02/anat/sub-strasbourg02_T1w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-strasbourg02/anat/sub-strasbourg02_space-other_T1w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-strasbourg02/anat/sub-strasbourg02_T1w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-strasbourg02/anat/sub-strasbourg02_space-other_T1w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-strasbourg02/anat/sub-strasbourg02_T1w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-strasbourg02/anat/sub-strasbourg02_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-strasbourg02/anat/sub-strasbourg02_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-strasbourg02/anat/sub-strasbourg02_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-strasbourg02/anat/sub-strasbourg02_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-strasbourg02/anat/sub-strasbourg02_T2star_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-strasbourg02/anat/sub-strasbourg02_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-strasbourg02/anat/sub-strasbourg02_T2star_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-strasbourg02/anat/sub-strasbourg02_space-other_T2w_label-discs_dlabel.json b/derivatives/labels/sub-strasbourg02/anat/sub-strasbourg02_T2w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-strasbourg02/anat/sub-strasbourg02_space-other_T2w_label-discs_dlabel.json rename to derivatives/labels/sub-strasbourg02/anat/sub-strasbourg02_T2w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-strasbourg02/anat/sub-strasbourg02_space-other_T2w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-strasbourg02/anat/sub-strasbourg02_T2w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-strasbourg02/anat/sub-strasbourg02_space-other_T2w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-strasbourg02/anat/sub-strasbourg02_T2w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-strasbourg02/anat/sub-strasbourg02_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-strasbourg02/anat/sub-strasbourg02_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-strasbourg02/anat/sub-strasbourg02_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-strasbourg02/anat/sub-strasbourg02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-strasbourg02/anat/sub-strasbourg02_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-strasbourg02/anat/sub-strasbourg02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-strasbourg02/anat/sub-strasbourg02_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-strasbourg02/anat/sub-strasbourg02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-strasbourg02/anat/sub-strasbourg02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-strasbourg02/anat/sub-strasbourg02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-strasbourg02/anat/sub-strasbourg02_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-strasbourg02/anat/sub-strasbourg02_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-strasbourg02/anat/sub-strasbourg02_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-strasbourg02/anat/sub-strasbourg02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-strasbourg02/anat/sub-strasbourg02_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-strasbourg02/anat/sub-strasbourg02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-strasbourg02/anat/sub-strasbourg02_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-strasbourg02/anat/sub-strasbourg02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-strasbourg02/anat/sub-strasbourg02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-strasbourg02/anat/sub-strasbourg02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-strasbourg02/anat/sub-strasbourg02_space-other_T2star_label-SC_seg.nii.gz b/derivatives/labels/sub-strasbourg02/anat/sub-strasbourg02_space-other_T2star_label-SC_seg.nii.gz index ed96ac60e3..e2e68c0ab6 100644 --- a/derivatives/labels/sub-strasbourg02/anat/sub-strasbourg02_space-other_T2star_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-strasbourg02/anat/sub-strasbourg02_space-other_T2star_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s14977--49f1ced7a00be5d86103603a8c5ebea31f7fac1f04b835a664dd7f6ccc193887.nii.gz +/annex/objects/SHA256E-s14998--c5cf41cd71127445be6e26e0c372bb32423b7f2d8dcdad9c040d899d2662b17f.nii.gz diff --git a/derivatives/labels/sub-strasbourg02/anat/sub-strasbourg02_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-strasbourg02/anat/sub-strasbourg02_space-other_T2star_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-strasbourg02/anat/sub-strasbourg02_space-other_T2star_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-strasbourg03/anat/sub-strasbourg03_space-other_T1w_label-discs_dlabel.json b/derivatives/labels/sub-strasbourg03/anat/sub-strasbourg03_T1w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-strasbourg03/anat/sub-strasbourg03_space-other_T1w_label-discs_dlabel.json rename to derivatives/labels/sub-strasbourg03/anat/sub-strasbourg03_T1w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-strasbourg03/anat/sub-strasbourg03_space-other_T1w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-strasbourg03/anat/sub-strasbourg03_T1w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-strasbourg03/anat/sub-strasbourg03_space-other_T1w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-strasbourg03/anat/sub-strasbourg03_T1w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-strasbourg03/anat/sub-strasbourg03_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-strasbourg03/anat/sub-strasbourg03_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-strasbourg03/anat/sub-strasbourg03_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-strasbourg03/anat/sub-strasbourg03_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-strasbourg03/anat/sub-strasbourg03_T2star_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-strasbourg03/anat/sub-strasbourg03_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-strasbourg03/anat/sub-strasbourg03_T2star_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-strasbourg03/anat/sub-strasbourg03_space-other_T2w_label-discs_dlabel.json b/derivatives/labels/sub-strasbourg03/anat/sub-strasbourg03_T2w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-strasbourg03/anat/sub-strasbourg03_space-other_T2w_label-discs_dlabel.json rename to derivatives/labels/sub-strasbourg03/anat/sub-strasbourg03_T2w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-strasbourg03/anat/sub-strasbourg03_space-other_T2w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-strasbourg03/anat/sub-strasbourg03_T2w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-strasbourg03/anat/sub-strasbourg03_space-other_T2w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-strasbourg03/anat/sub-strasbourg03_T2w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-strasbourg03/anat/sub-strasbourg03_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-strasbourg03/anat/sub-strasbourg03_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-strasbourg03/anat/sub-strasbourg03_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-strasbourg03/anat/sub-strasbourg03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-strasbourg03/anat/sub-strasbourg03_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-strasbourg03/anat/sub-strasbourg03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-strasbourg03/anat/sub-strasbourg03_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-strasbourg03/anat/sub-strasbourg03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-strasbourg03/anat/sub-strasbourg03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-strasbourg03/anat/sub-strasbourg03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-strasbourg03/anat/sub-strasbourg03_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-strasbourg03/anat/sub-strasbourg03_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-strasbourg03/anat/sub-strasbourg03_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-strasbourg03/anat/sub-strasbourg03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-strasbourg03/anat/sub-strasbourg03_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-strasbourg03/anat/sub-strasbourg03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-strasbourg03/anat/sub-strasbourg03_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-strasbourg03/anat/sub-strasbourg03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-strasbourg03/anat/sub-strasbourg03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-strasbourg03/anat/sub-strasbourg03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-strasbourg03/anat/sub-strasbourg03_space-other_T2star_label-SC_seg.nii.gz b/derivatives/labels/sub-strasbourg03/anat/sub-strasbourg03_space-other_T2star_label-SC_seg.nii.gz index a71542d575..235fe7f13d 100644 --- a/derivatives/labels/sub-strasbourg03/anat/sub-strasbourg03_space-other_T2star_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-strasbourg03/anat/sub-strasbourg03_space-other_T2star_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s14902--074a775bd29a13c277284abf568bffebbd19938d058f5012f3ff22cdf2ad0dd7.nii.gz +/annex/objects/SHA256E-s14923--6d601a79e6f888e4f277c25310bcec30ceb2625aee0302b1e1fc0d410d51344d.nii.gz diff --git a/derivatives/labels/sub-strasbourg03/anat/sub-strasbourg03_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-strasbourg03/anat/sub-strasbourg03_space-other_T2star_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-strasbourg03/anat/sub-strasbourg03_space-other_T2star_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-strasbourg04/anat/sub-strasbourg04_space-other_T1w_label-discs_dlabel.json b/derivatives/labels/sub-strasbourg04/anat/sub-strasbourg04_T1w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-strasbourg04/anat/sub-strasbourg04_space-other_T1w_label-discs_dlabel.json rename to derivatives/labels/sub-strasbourg04/anat/sub-strasbourg04_T1w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-strasbourg04/anat/sub-strasbourg04_space-other_T1w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-strasbourg04/anat/sub-strasbourg04_T1w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-strasbourg04/anat/sub-strasbourg04_space-other_T1w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-strasbourg04/anat/sub-strasbourg04_T1w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-strasbourg04/anat/sub-strasbourg04_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-strasbourg04/anat/sub-strasbourg04_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-strasbourg04/anat/sub-strasbourg04_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-strasbourg04/anat/sub-strasbourg04_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-strasbourg04/anat/sub-strasbourg04_T2star_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-strasbourg04/anat/sub-strasbourg04_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-strasbourg04/anat/sub-strasbourg04_T2star_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-strasbourg04/anat/sub-strasbourg04_space-other_T2w_label-discs_dlabel.json b/derivatives/labels/sub-strasbourg04/anat/sub-strasbourg04_T2w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-strasbourg04/anat/sub-strasbourg04_space-other_T2w_label-discs_dlabel.json rename to derivatives/labels/sub-strasbourg04/anat/sub-strasbourg04_T2w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-strasbourg04/anat/sub-strasbourg04_space-other_T2w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-strasbourg04/anat/sub-strasbourg04_T2w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-strasbourg04/anat/sub-strasbourg04_space-other_T2w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-strasbourg04/anat/sub-strasbourg04_T2w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-strasbourg04/anat/sub-strasbourg04_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-strasbourg04/anat/sub-strasbourg04_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-strasbourg04/anat/sub-strasbourg04_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-strasbourg04/anat/sub-strasbourg04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-strasbourg04/anat/sub-strasbourg04_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-strasbourg04/anat/sub-strasbourg04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-strasbourg04/anat/sub-strasbourg04_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-strasbourg04/anat/sub-strasbourg04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-strasbourg04/anat/sub-strasbourg04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-strasbourg04/anat/sub-strasbourg04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-strasbourg04/anat/sub-strasbourg04_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-strasbourg04/anat/sub-strasbourg04_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-strasbourg04/anat/sub-strasbourg04_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-strasbourg04/anat/sub-strasbourg04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-strasbourg04/anat/sub-strasbourg04_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-strasbourg04/anat/sub-strasbourg04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-strasbourg04/anat/sub-strasbourg04_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-strasbourg04/anat/sub-strasbourg04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-strasbourg04/anat/sub-strasbourg04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-strasbourg04/anat/sub-strasbourg04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-strasbourg04/anat/sub-strasbourg04_space-other_T2star_label-SC_seg.nii.gz b/derivatives/labels/sub-strasbourg04/anat/sub-strasbourg04_space-other_T2star_label-SC_seg.nii.gz index 994c1edce8..d021b8f886 100644 --- a/derivatives/labels/sub-strasbourg04/anat/sub-strasbourg04_space-other_T2star_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-strasbourg04/anat/sub-strasbourg04_space-other_T2star_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s14743--c586f2ea942391d368e520a21e6946fa46448e633be1adca1afbc11e291e16e9.nii.gz +/annex/objects/SHA256E-s14768--c874990c7b6762f879930fb593ac2620efb74ccff13c17cbcc5b43b4c2e50478.nii.gz diff --git a/derivatives/labels/sub-strasbourg04/anat/sub-strasbourg04_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-strasbourg04/anat/sub-strasbourg04_space-other_T2star_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-strasbourg04/anat/sub-strasbourg04_space-other_T2star_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-strasbourg05/anat/sub-strasbourg05_space-other_T1w_label-discs_dlabel.json b/derivatives/labels/sub-strasbourg05/anat/sub-strasbourg05_T1w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-strasbourg05/anat/sub-strasbourg05_space-other_T1w_label-discs_dlabel.json rename to derivatives/labels/sub-strasbourg05/anat/sub-strasbourg05_T1w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-strasbourg05/anat/sub-strasbourg05_space-other_T1w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-strasbourg05/anat/sub-strasbourg05_T1w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-strasbourg05/anat/sub-strasbourg05_space-other_T1w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-strasbourg05/anat/sub-strasbourg05_T1w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-strasbourg05/anat/sub-strasbourg05_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-strasbourg05/anat/sub-strasbourg05_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-strasbourg05/anat/sub-strasbourg05_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-strasbourg05/anat/sub-strasbourg05_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-strasbourg05/anat/sub-strasbourg05_T2star_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-strasbourg05/anat/sub-strasbourg05_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-strasbourg05/anat/sub-strasbourg05_T2star_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-strasbourg05/anat/sub-strasbourg05_space-other_T2w_label-discs_dlabel.json b/derivatives/labels/sub-strasbourg05/anat/sub-strasbourg05_T2w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-strasbourg05/anat/sub-strasbourg05_space-other_T2w_label-discs_dlabel.json rename to derivatives/labels/sub-strasbourg05/anat/sub-strasbourg05_T2w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-strasbourg05/anat/sub-strasbourg05_space-other_T2w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-strasbourg05/anat/sub-strasbourg05_T2w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-strasbourg05/anat/sub-strasbourg05_space-other_T2w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-strasbourg05/anat/sub-strasbourg05_T2w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-strasbourg05/anat/sub-strasbourg05_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-strasbourg05/anat/sub-strasbourg05_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-strasbourg05/anat/sub-strasbourg05_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-strasbourg05/anat/sub-strasbourg05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-strasbourg05/anat/sub-strasbourg05_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-strasbourg05/anat/sub-strasbourg05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-strasbourg05/anat/sub-strasbourg05_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-strasbourg05/anat/sub-strasbourg05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-strasbourg05/anat/sub-strasbourg05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-strasbourg05/anat/sub-strasbourg05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-strasbourg05/anat/sub-strasbourg05_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-strasbourg05/anat/sub-strasbourg05_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-strasbourg05/anat/sub-strasbourg05_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-strasbourg05/anat/sub-strasbourg05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-strasbourg05/anat/sub-strasbourg05_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-strasbourg05/anat/sub-strasbourg05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-strasbourg05/anat/sub-strasbourg05_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-strasbourg05/anat/sub-strasbourg05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-strasbourg05/anat/sub-strasbourg05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-strasbourg05/anat/sub-strasbourg05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-strasbourg05/anat/sub-strasbourg05_space-other_T2star_label-SC_seg.nii.gz b/derivatives/labels/sub-strasbourg05/anat/sub-strasbourg05_space-other_T2star_label-SC_seg.nii.gz index 229c5109b5..b2ad32ce6e 100644 --- a/derivatives/labels/sub-strasbourg05/anat/sub-strasbourg05_space-other_T2star_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-strasbourg05/anat/sub-strasbourg05_space-other_T2star_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s14881--61b0a6b7105074f1bd4c117c37feba2773d10207321ab144d829fd24bee37f16.nii.gz +/annex/objects/SHA256E-s14902--8a911101f33e1ab9888c1d7248eeaaf3a6aff5a27c7b5469d1797d1697613025.nii.gz diff --git a/derivatives/labels/sub-strasbourg05/anat/sub-strasbourg05_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-strasbourg05/anat/sub-strasbourg05_space-other_T2star_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-strasbourg05/anat/sub-strasbourg05_space-other_T2star_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-strasbourg06/anat/sub-strasbourg06_space-other_T1w_label-discs_dlabel.json b/derivatives/labels/sub-strasbourg06/anat/sub-strasbourg06_T1w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-strasbourg06/anat/sub-strasbourg06_space-other_T1w_label-discs_dlabel.json rename to derivatives/labels/sub-strasbourg06/anat/sub-strasbourg06_T1w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-strasbourg06/anat/sub-strasbourg06_space-other_T1w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-strasbourg06/anat/sub-strasbourg06_T1w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-strasbourg06/anat/sub-strasbourg06_space-other_T1w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-strasbourg06/anat/sub-strasbourg06_T1w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-strasbourg06/anat/sub-strasbourg06_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-strasbourg06/anat/sub-strasbourg06_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-strasbourg06/anat/sub-strasbourg06_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-strasbourg06/anat/sub-strasbourg06_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-strasbourg06/anat/sub-strasbourg06_T2star_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-strasbourg06/anat/sub-strasbourg06_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-strasbourg06/anat/sub-strasbourg06_T2star_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-strasbourg06/anat/sub-strasbourg06_space-other_T2w_label-discs_dlabel.json b/derivatives/labels/sub-strasbourg06/anat/sub-strasbourg06_T2w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-strasbourg06/anat/sub-strasbourg06_space-other_T2w_label-discs_dlabel.json rename to derivatives/labels/sub-strasbourg06/anat/sub-strasbourg06_T2w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-strasbourg06/anat/sub-strasbourg06_space-other_T2w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-strasbourg06/anat/sub-strasbourg06_T2w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-strasbourg06/anat/sub-strasbourg06_space-other_T2w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-strasbourg06/anat/sub-strasbourg06_T2w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-strasbourg06/anat/sub-strasbourg06_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-strasbourg06/anat/sub-strasbourg06_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-strasbourg06/anat/sub-strasbourg06_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-strasbourg06/anat/sub-strasbourg06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-strasbourg06/anat/sub-strasbourg06_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-strasbourg06/anat/sub-strasbourg06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-strasbourg06/anat/sub-strasbourg06_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-strasbourg06/anat/sub-strasbourg06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-strasbourg06/anat/sub-strasbourg06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-strasbourg06/anat/sub-strasbourg06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-strasbourg06/anat/sub-strasbourg06_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-strasbourg06/anat/sub-strasbourg06_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-strasbourg06/anat/sub-strasbourg06_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-strasbourg06/anat/sub-strasbourg06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-strasbourg06/anat/sub-strasbourg06_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-strasbourg06/anat/sub-strasbourg06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-strasbourg06/anat/sub-strasbourg06_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-strasbourg06/anat/sub-strasbourg06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-strasbourg06/anat/sub-strasbourg06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-strasbourg06/anat/sub-strasbourg06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-strasbourg06/anat/sub-strasbourg06_space-other_T2star_label-SC_seg.nii.gz b/derivatives/labels/sub-strasbourg06/anat/sub-strasbourg06_space-other_T2star_label-SC_seg.nii.gz index 02ac99ef9a..1cc7aa5817 100644 --- a/derivatives/labels/sub-strasbourg06/anat/sub-strasbourg06_space-other_T2star_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-strasbourg06/anat/sub-strasbourg06_space-other_T2star_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s14803--bbea793768f0b2ce896f2974164638bd1677d2f92be1a81f468b9c0696a8c6bf.nii.gz +/annex/objects/SHA256E-s14827--32db54fc7ec3f92c49b26b3093902a4798ef004734f308ed4c0d85a5dbeb6913.nii.gz diff --git a/derivatives/labels/sub-strasbourg06/anat/sub-strasbourg06_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-strasbourg06/anat/sub-strasbourg06_space-other_T2star_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-strasbourg06/anat/sub-strasbourg06_space-other_T2star_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-tehranS01/anat/sub-tehranS01_space-other_T1w_label-discs_dlabel.json b/derivatives/labels/sub-tehranS01/anat/sub-tehranS01_T1w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-tehranS01/anat/sub-tehranS01_space-other_T1w_label-discs_dlabel.json rename to derivatives/labels/sub-tehranS01/anat/sub-tehranS01_T1w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-tehranS01/anat/sub-tehranS01_space-other_T1w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-tehranS01/anat/sub-tehranS01_T1w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-tehranS01/anat/sub-tehranS01_space-other_T1w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-tehranS01/anat/sub-tehranS01_T1w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-tehranS01/anat/sub-tehranS01_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-tehranS01/anat/sub-tehranS01_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-tehranS01/anat/sub-tehranS01_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-tehranS01/anat/sub-tehranS01_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-tehranS01/anat/sub-tehranS01_T2star_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-tehranS01/anat/sub-tehranS01_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-tehranS01/anat/sub-tehranS01_T2star_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-tehranS01/anat/sub-tehranS01_space-other_T2w_label-discs_dlabel.json b/derivatives/labels/sub-tehranS01/anat/sub-tehranS01_T2w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-tehranS01/anat/sub-tehranS01_space-other_T2w_label-discs_dlabel.json rename to derivatives/labels/sub-tehranS01/anat/sub-tehranS01_T2w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-tehranS01/anat/sub-tehranS01_space-other_T2w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-tehranS01/anat/sub-tehranS01_T2w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-tehranS01/anat/sub-tehranS01_space-other_T2w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-tehranS01/anat/sub-tehranS01_T2w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-tehranS01/anat/sub-tehranS01_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-tehranS01/anat/sub-tehranS01_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-tehranS01/anat/sub-tehranS01_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-tehranS01/anat/sub-tehranS01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-tehranS01/anat/sub-tehranS01_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-tehranS01/anat/sub-tehranS01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-tehranS01/anat/sub-tehranS01_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-tehranS01/anat/sub-tehranS01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-tehranS01/anat/sub-tehranS01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-tehranS01/anat/sub-tehranS01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-tehranS01/anat/sub-tehranS01_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-tehranS01/anat/sub-tehranS01_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-tehranS01/anat/sub-tehranS01_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-tehranS01/anat/sub-tehranS01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-tehranS01/anat/sub-tehranS01_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-tehranS01/anat/sub-tehranS01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-tehranS01/anat/sub-tehranS01_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-tehranS01/anat/sub-tehranS01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-tehranS01/anat/sub-tehranS01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-tehranS01/anat/sub-tehranS01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-tehranS01/anat/sub-tehranS01_space-other_T2star_label-SC_seg.nii.gz b/derivatives/labels/sub-tehranS01/anat/sub-tehranS01_space-other_T2star_label-SC_seg.nii.gz index d424184c6e..336b61ad47 100644 --- a/derivatives/labels/sub-tehranS01/anat/sub-tehranS01_space-other_T2star_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-tehranS01/anat/sub-tehranS01_space-other_T2star_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s14894--92e22fa89d0336c332942138bce39300b2db735662642110c6e0920c24bc6967.nii.gz +/annex/objects/SHA256E-s14915--a39f5fa035b8f6580c8baeacd390847e11c174707138a6fa5a1ca7024b1acfa6.nii.gz diff --git a/derivatives/labels/sub-tehranS01/anat/sub-tehranS01_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-tehranS01/anat/sub-tehranS01_space-other_T2star_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-tehranS01/anat/sub-tehranS01_space-other_T2star_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-tehranS02/anat/sub-tehranS02_space-other_T1w_label-discs_dlabel.json b/derivatives/labels/sub-tehranS02/anat/sub-tehranS02_T1w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-tehranS02/anat/sub-tehranS02_space-other_T1w_label-discs_dlabel.json rename to derivatives/labels/sub-tehranS02/anat/sub-tehranS02_T1w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-tehranS02/anat/sub-tehranS02_space-other_T1w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-tehranS02/anat/sub-tehranS02_T1w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-tehranS02/anat/sub-tehranS02_space-other_T1w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-tehranS02/anat/sub-tehranS02_T1w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-tehranS02/anat/sub-tehranS02_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-tehranS02/anat/sub-tehranS02_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-tehranS02/anat/sub-tehranS02_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-tehranS02/anat/sub-tehranS02_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-tehranS02/anat/sub-tehranS02_T2star_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-tehranS02/anat/sub-tehranS02_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-tehranS02/anat/sub-tehranS02_T2star_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-tehranS02/anat/sub-tehranS02_space-other_T2w_label-discs_dlabel.json b/derivatives/labels/sub-tehranS02/anat/sub-tehranS02_T2w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-tehranS02/anat/sub-tehranS02_space-other_T2w_label-discs_dlabel.json rename to derivatives/labels/sub-tehranS02/anat/sub-tehranS02_T2w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-tehranS02/anat/sub-tehranS02_space-other_T2w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-tehranS02/anat/sub-tehranS02_T2w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-tehranS02/anat/sub-tehranS02_space-other_T2w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-tehranS02/anat/sub-tehranS02_T2w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-tehranS02/anat/sub-tehranS02_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-tehranS02/anat/sub-tehranS02_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-tehranS02/anat/sub-tehranS02_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-tehranS02/anat/sub-tehranS02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-tehranS02/anat/sub-tehranS02_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-tehranS02/anat/sub-tehranS02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-tehranS02/anat/sub-tehranS02_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-tehranS02/anat/sub-tehranS02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-tehranS02/anat/sub-tehranS02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-tehranS02/anat/sub-tehranS02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-tehranS02/anat/sub-tehranS02_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-tehranS02/anat/sub-tehranS02_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-tehranS02/anat/sub-tehranS02_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-tehranS02/anat/sub-tehranS02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-tehranS02/anat/sub-tehranS02_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-tehranS02/anat/sub-tehranS02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-tehranS02/anat/sub-tehranS02_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-tehranS02/anat/sub-tehranS02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-tehranS02/anat/sub-tehranS02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-tehranS02/anat/sub-tehranS02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-tehranS02/anat/sub-tehranS02_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.json b/derivatives/labels/sub-tehranS02/anat/sub-tehranS02_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.json new file mode 100644 index 0000000000..e537a137e5 --- /dev/null +++ b/derivatives/labels/sub-tehranS02/anat/sub-tehranS02_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.json @@ -0,0 +1,11 @@ +{ + "SpatialReference": { + "Orientation": "RPI", + "Resampling": "1x1x1" + }, + "GeneratedBy": [ + { + "Description": "Manual label of C2 and C5 mid-vertebrae, at the center of the spinal cord." + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-tehranS02/anat/sub-tehranS02_space-other_T1w_RPI_r_labels-manual.nii.gz b/derivatives/labels/sub-tehranS02/anat/sub-tehranS02_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-tehranS02/anat/sub-tehranS02_space-other_T1w_RPI_r_labels-manual.nii.gz rename to derivatives/labels/sub-tehranS02/anat/sub-tehranS02_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.nii.gz diff --git a/derivatives/labels/sub-tehranS02/anat/sub-tehranS02_space-other_T2star_label-SC_seg.nii.gz b/derivatives/labels/sub-tehranS02/anat/sub-tehranS02_space-other_T2star_label-SC_seg.nii.gz index 57ba04fe05..9c3b8bee3a 100644 --- a/derivatives/labels/sub-tehranS02/anat/sub-tehranS02_space-other_T2star_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-tehranS02/anat/sub-tehranS02_space-other_T2star_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s15026--e9250a014318d969ed7a82faacffeba51cf5a50dba76a91ff8e717f8fabddac8.nii.gz +/annex/objects/SHA256E-s15047--6d162244a1dbb7c813abfc8ca73d350424c602f35d62120d441154397583fb6e.nii.gz diff --git a/derivatives/labels/sub-tehranS02/anat/sub-tehranS02_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-tehranS02/anat/sub-tehranS02_space-other_T2star_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-tehranS02/anat/sub-tehranS02_space-other_T2star_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-tehranS03/anat/sub-tehranS03_space-other_T1w_label-discs_dlabel.json b/derivatives/labels/sub-tehranS03/anat/sub-tehranS03_T1w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-tehranS03/anat/sub-tehranS03_space-other_T1w_label-discs_dlabel.json rename to derivatives/labels/sub-tehranS03/anat/sub-tehranS03_T1w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-tehranS03/anat/sub-tehranS03_space-other_T1w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-tehranS03/anat/sub-tehranS03_T1w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-tehranS03/anat/sub-tehranS03_space-other_T1w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-tehranS03/anat/sub-tehranS03_T1w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-tehranS03/anat/sub-tehranS03_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-tehranS03/anat/sub-tehranS03_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-tehranS03/anat/sub-tehranS03_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-tehranS03/anat/sub-tehranS03_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-tehranS03/anat/sub-tehranS03_T2star_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-tehranS03/anat/sub-tehranS03_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-tehranS03/anat/sub-tehranS03_T2star_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-tehranS03/anat/sub-tehranS03_space-other_T2w_label-discs_dlabel.json b/derivatives/labels/sub-tehranS03/anat/sub-tehranS03_T2w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-tehranS03/anat/sub-tehranS03_space-other_T2w_label-discs_dlabel.json rename to derivatives/labels/sub-tehranS03/anat/sub-tehranS03_T2w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-tehranS03/anat/sub-tehranS03_space-other_T2w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-tehranS03/anat/sub-tehranS03_T2w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-tehranS03/anat/sub-tehranS03_space-other_T2w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-tehranS03/anat/sub-tehranS03_T2w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-tehranS03/anat/sub-tehranS03_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-tehranS03/anat/sub-tehranS03_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-tehranS03/anat/sub-tehranS03_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-tehranS03/anat/sub-tehranS03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-tehranS03/anat/sub-tehranS03_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-tehranS03/anat/sub-tehranS03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-tehranS03/anat/sub-tehranS03_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-tehranS03/anat/sub-tehranS03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-tehranS03/anat/sub-tehranS03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-tehranS03/anat/sub-tehranS03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-tehranS03/anat/sub-tehranS03_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-tehranS03/anat/sub-tehranS03_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-tehranS03/anat/sub-tehranS03_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-tehranS03/anat/sub-tehranS03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-tehranS03/anat/sub-tehranS03_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-tehranS03/anat/sub-tehranS03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-tehranS03/anat/sub-tehranS03_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-tehranS03/anat/sub-tehranS03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-tehranS03/anat/sub-tehranS03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-tehranS03/anat/sub-tehranS03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-tehranS03/anat/sub-tehranS03_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.json b/derivatives/labels/sub-tehranS03/anat/sub-tehranS03_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.json new file mode 100644 index 0000000000..e537a137e5 --- /dev/null +++ b/derivatives/labels/sub-tehranS03/anat/sub-tehranS03_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.json @@ -0,0 +1,11 @@ +{ + "SpatialReference": { + "Orientation": "RPI", + "Resampling": "1x1x1" + }, + "GeneratedBy": [ + { + "Description": "Manual label of C2 and C5 mid-vertebrae, at the center of the spinal cord." + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-tehranS03/anat/sub-tehranS03_space-other_T1w_RPI_r_labels-manual.nii.gz b/derivatives/labels/sub-tehranS03/anat/sub-tehranS03_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-tehranS03/anat/sub-tehranS03_space-other_T1w_RPI_r_labels-manual.nii.gz rename to derivatives/labels/sub-tehranS03/anat/sub-tehranS03_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.nii.gz diff --git a/derivatives/labels/sub-tehranS03/anat/sub-tehranS03_space-other_T2star_label-SC_seg.nii.gz b/derivatives/labels/sub-tehranS03/anat/sub-tehranS03_space-other_T2star_label-SC_seg.nii.gz index 6d134b394f..d183c9e7e0 100644 --- a/derivatives/labels/sub-tehranS03/anat/sub-tehranS03_space-other_T2star_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-tehranS03/anat/sub-tehranS03_space-other_T2star_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s14876--981facbf284bb93c637e093c9738beca18b5b74b630229cda5d2a4084331d0ff.nii.gz +/annex/objects/SHA256E-s14897--5939c20343d7ab185f16945e772cade0d97ac008fe7cca7fffa39478e20bd3f8.nii.gz diff --git a/derivatives/labels/sub-tehranS03/anat/sub-tehranS03_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-tehranS03/anat/sub-tehranS03_space-other_T2star_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-tehranS03/anat/sub-tehranS03_space-other_T2star_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-tehranS04/anat/sub-tehranS04_space-other_T1w_label-discs_dlabel.json b/derivatives/labels/sub-tehranS04/anat/sub-tehranS04_T1w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-tehranS04/anat/sub-tehranS04_space-other_T1w_label-discs_dlabel.json rename to derivatives/labels/sub-tehranS04/anat/sub-tehranS04_T1w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-tehranS04/anat/sub-tehranS04_space-other_T1w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-tehranS04/anat/sub-tehranS04_T1w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-tehranS04/anat/sub-tehranS04_space-other_T1w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-tehranS04/anat/sub-tehranS04_T1w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-tehranS04/anat/sub-tehranS04_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-tehranS04/anat/sub-tehranS04_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-tehranS04/anat/sub-tehranS04_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-tehranS04/anat/sub-tehranS04_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-tehranS04/anat/sub-tehranS04_T2star_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-tehranS04/anat/sub-tehranS04_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-tehranS04/anat/sub-tehranS04_T2star_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-tehranS04/anat/sub-tehranS04_space-other_T2w_label-discs_dlabel.json b/derivatives/labels/sub-tehranS04/anat/sub-tehranS04_T2w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-tehranS04/anat/sub-tehranS04_space-other_T2w_label-discs_dlabel.json rename to derivatives/labels/sub-tehranS04/anat/sub-tehranS04_T2w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-tehranS04/anat/sub-tehranS04_space-other_T2w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-tehranS04/anat/sub-tehranS04_T2w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-tehranS04/anat/sub-tehranS04_space-other_T2w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-tehranS04/anat/sub-tehranS04_T2w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-tehranS04/anat/sub-tehranS04_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-tehranS04/anat/sub-tehranS04_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-tehranS04/anat/sub-tehranS04_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-tehranS04/anat/sub-tehranS04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-tehranS04/anat/sub-tehranS04_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-tehranS04/anat/sub-tehranS04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-tehranS04/anat/sub-tehranS04_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-tehranS04/anat/sub-tehranS04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-tehranS04/anat/sub-tehranS04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-tehranS04/anat/sub-tehranS04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-tehranS04/anat/sub-tehranS04_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-tehranS04/anat/sub-tehranS04_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-tehranS04/anat/sub-tehranS04_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-tehranS04/anat/sub-tehranS04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-tehranS04/anat/sub-tehranS04_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-tehranS04/anat/sub-tehranS04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-tehranS04/anat/sub-tehranS04_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-tehranS04/anat/sub-tehranS04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-tehranS04/anat/sub-tehranS04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-tehranS04/anat/sub-tehranS04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-tehranS04/anat/sub-tehranS04_space-other_T2star_label-SC_seg.nii.gz b/derivatives/labels/sub-tehranS04/anat/sub-tehranS04_space-other_T2star_label-SC_seg.nii.gz index 1b0173dd25..f26714d4ab 100644 --- a/derivatives/labels/sub-tehranS04/anat/sub-tehranS04_space-other_T2star_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-tehranS04/anat/sub-tehranS04_space-other_T2star_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s14893--2fde0b6dc4316636a69083afa452b3206023e33f61ef60c56284162aec6875ac.nii.gz +/annex/objects/SHA256E-s14914--3d35586dca15dcc674e4faa665b16d2676e6c74ab892ce989555964ae28ed4d0.nii.gz diff --git a/derivatives/labels/sub-tehranS04/anat/sub-tehranS04_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-tehranS04/anat/sub-tehranS04_space-other_T2star_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-tehranS04/anat/sub-tehranS04_space-other_T2star_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-tehranS05/anat/sub-tehranS05_space-other_T1w_label-discs_dlabel.json b/derivatives/labels/sub-tehranS05/anat/sub-tehranS05_T1w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-tehranS05/anat/sub-tehranS05_space-other_T1w_label-discs_dlabel.json rename to derivatives/labels/sub-tehranS05/anat/sub-tehranS05_T1w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-tehranS05/anat/sub-tehranS05_space-other_T1w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-tehranS05/anat/sub-tehranS05_T1w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-tehranS05/anat/sub-tehranS05_space-other_T1w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-tehranS05/anat/sub-tehranS05_T1w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-tehranS05/anat/sub-tehranS05_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-tehranS05/anat/sub-tehranS05_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-tehranS05/anat/sub-tehranS05_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-tehranS05/anat/sub-tehranS05_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-tehranS05/anat/sub-tehranS05_T2star_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-tehranS05/anat/sub-tehranS05_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-tehranS05/anat/sub-tehranS05_T2star_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-tehranS05/anat/sub-tehranS05_space-other_T2w_label-discs_dlabel.json b/derivatives/labels/sub-tehranS05/anat/sub-tehranS05_T2w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-tehranS05/anat/sub-tehranS05_space-other_T2w_label-discs_dlabel.json rename to derivatives/labels/sub-tehranS05/anat/sub-tehranS05_T2w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-tehranS05/anat/sub-tehranS05_space-other_T2w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-tehranS05/anat/sub-tehranS05_T2w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-tehranS05/anat/sub-tehranS05_space-other_T2w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-tehranS05/anat/sub-tehranS05_T2w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-tehranS05/anat/sub-tehranS05_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-tehranS05/anat/sub-tehranS05_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-tehranS05/anat/sub-tehranS05_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-tehranS05/anat/sub-tehranS05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-tehranS05/anat/sub-tehranS05_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-tehranS05/anat/sub-tehranS05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-tehranS05/anat/sub-tehranS05_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-tehranS05/anat/sub-tehranS05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-tehranS05/anat/sub-tehranS05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-tehranS05/anat/sub-tehranS05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-tehranS05/anat/sub-tehranS05_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-tehranS05/anat/sub-tehranS05_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-tehranS05/anat/sub-tehranS05_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-tehranS05/anat/sub-tehranS05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-tehranS05/anat/sub-tehranS05_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-tehranS05/anat/sub-tehranS05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-tehranS05/anat/sub-tehranS05_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-tehranS05/anat/sub-tehranS05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-tehranS05/anat/sub-tehranS05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-tehranS05/anat/sub-tehranS05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-tehranS05/anat/sub-tehranS05_space-other_T2star_label-SC_seg.nii.gz b/derivatives/labels/sub-tehranS05/anat/sub-tehranS05_space-other_T2star_label-SC_seg.nii.gz index 5c8363a1b0..e46bfc10eb 100644 --- a/derivatives/labels/sub-tehranS05/anat/sub-tehranS05_space-other_T2star_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-tehranS05/anat/sub-tehranS05_space-other_T2star_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s14767--ce313fc4f6886a8ce8183d85ec22bb8ece9f78fd850506880cfdcfd2574539d1.nii.gz +/annex/objects/SHA256E-s14788--167c7dd1391dd9b2ee649b36b5fd9dfbd573000149ffd818de90c12f01cad99e.nii.gz diff --git a/derivatives/labels/sub-tehranS05/anat/sub-tehranS05_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-tehranS05/anat/sub-tehranS05_space-other_T2star_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-tehranS05/anat/sub-tehranS05_space-other_T2star_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-tehranS06/anat/sub-tehranS06_space-other_T1w_label-discs_dlabel.json b/derivatives/labels/sub-tehranS06/anat/sub-tehranS06_T1w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-tehranS06/anat/sub-tehranS06_space-other_T1w_label-discs_dlabel.json rename to derivatives/labels/sub-tehranS06/anat/sub-tehranS06_T1w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-tehranS06/anat/sub-tehranS06_space-other_T1w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-tehranS06/anat/sub-tehranS06_T1w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-tehranS06/anat/sub-tehranS06_space-other_T1w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-tehranS06/anat/sub-tehranS06_T1w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-tehranS06/anat/sub-tehranS06_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-tehranS06/anat/sub-tehranS06_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-tehranS06/anat/sub-tehranS06_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-tehranS06/anat/sub-tehranS06_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-tehranS06/anat/sub-tehranS06_T2star_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-tehranS06/anat/sub-tehranS06_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-tehranS06/anat/sub-tehranS06_T2star_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-tehranS06/anat/sub-tehranS06_space-other_T2w_label-discs_dlabel.json b/derivatives/labels/sub-tehranS06/anat/sub-tehranS06_T2w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-tehranS06/anat/sub-tehranS06_space-other_T2w_label-discs_dlabel.json rename to derivatives/labels/sub-tehranS06/anat/sub-tehranS06_T2w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-tehranS06/anat/sub-tehranS06_space-other_T2w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-tehranS06/anat/sub-tehranS06_T2w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-tehranS06/anat/sub-tehranS06_space-other_T2w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-tehranS06/anat/sub-tehranS06_T2w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-tehranS06/anat/sub-tehranS06_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-tehranS06/anat/sub-tehranS06_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-tehranS06/anat/sub-tehranS06_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-tehranS06/anat/sub-tehranS06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-tehranS06/anat/sub-tehranS06_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-tehranS06/anat/sub-tehranS06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-tehranS06/anat/sub-tehranS06_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-tehranS06/anat/sub-tehranS06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-tehranS06/anat/sub-tehranS06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-tehranS06/anat/sub-tehranS06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-tehranS06/anat/sub-tehranS06_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-tehranS06/anat/sub-tehranS06_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-tehranS06/anat/sub-tehranS06_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-tehranS06/anat/sub-tehranS06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-tehranS06/anat/sub-tehranS06_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-tehranS06/anat/sub-tehranS06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-tehranS06/anat/sub-tehranS06_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-tehranS06/anat/sub-tehranS06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-tehranS06/anat/sub-tehranS06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-tehranS06/anat/sub-tehranS06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-tehranS06/anat/sub-tehranS06_space-other_T2star_label-SC_seg.nii.gz b/derivatives/labels/sub-tehranS06/anat/sub-tehranS06_space-other_T2star_label-SC_seg.nii.gz index c6942865b3..d83bc40874 100644 --- a/derivatives/labels/sub-tehranS06/anat/sub-tehranS06_space-other_T2star_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-tehranS06/anat/sub-tehranS06_space-other_T2star_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s6879--0532e23107cd313d36cc8da1f5bae1d3369e2a57331543970840ec8d22b1e3be.nii.gz +/annex/objects/SHA256E-s28483--ed0bc0dd31057854c01d9ffd6bdbf56b2f86f197014b7274d611aeb3d74d73e4.nii.gz diff --git a/derivatives/labels/sub-tehranS06/anat/sub-tehranS06_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-tehranS06/anat/sub-tehranS06_space-other_T2star_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-tehranS06/anat/sub-tehranS06_space-other_T2star_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-tokyo750w01/anat/sub-tokyo750w01_space-other_T1w_label-discs_dlabel.json b/derivatives/labels/sub-tokyo750w01/anat/sub-tokyo750w01_T1w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-tokyo750w01/anat/sub-tokyo750w01_space-other_T1w_label-discs_dlabel.json rename to derivatives/labels/sub-tokyo750w01/anat/sub-tokyo750w01_T1w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-tokyo750w01/anat/sub-tokyo750w01_space-other_T1w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-tokyo750w01/anat/sub-tokyo750w01_T1w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-tokyo750w01/anat/sub-tokyo750w01_space-other_T1w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-tokyo750w01/anat/sub-tokyo750w01_T1w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-tokyo750w01/anat/sub-tokyo750w01_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-tokyo750w01/anat/sub-tokyo750w01_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-tokyo750w01/anat/sub-tokyo750w01_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-tokyo750w01/anat/sub-tokyo750w01_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-tokyo750w01/anat/sub-tokyo750w01_T2star_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-tokyo750w01/anat/sub-tokyo750w01_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-tokyo750w01/anat/sub-tokyo750w01_T2star_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-tokyo750w01/anat/sub-tokyo750w01_space-other_T2w_label-discs_dlabel.json b/derivatives/labels/sub-tokyo750w01/anat/sub-tokyo750w01_T2w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-tokyo750w01/anat/sub-tokyo750w01_space-other_T2w_label-discs_dlabel.json rename to derivatives/labels/sub-tokyo750w01/anat/sub-tokyo750w01_T2w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-tokyo750w01/anat/sub-tokyo750w01_space-other_T2w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-tokyo750w01/anat/sub-tokyo750w01_T2w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-tokyo750w01/anat/sub-tokyo750w01_space-other_T2w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-tokyo750w01/anat/sub-tokyo750w01_T2w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-tokyo750w01/anat/sub-tokyo750w01_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-tokyo750w01/anat/sub-tokyo750w01_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-tokyo750w01/anat/sub-tokyo750w01_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-tokyo750w01/anat/sub-tokyo750w01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-tokyo750w01/anat/sub-tokyo750w01_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-tokyo750w01/anat/sub-tokyo750w01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-tokyo750w01/anat/sub-tokyo750w01_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-tokyo750w01/anat/sub-tokyo750w01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-tokyo750w01/anat/sub-tokyo750w01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-tokyo750w01/anat/sub-tokyo750w01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-tokyo750w01/anat/sub-tokyo750w01_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-tokyo750w01/anat/sub-tokyo750w01_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-tokyo750w01/anat/sub-tokyo750w01_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-tokyo750w01/anat/sub-tokyo750w01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-tokyo750w01/anat/sub-tokyo750w01_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-tokyo750w01/anat/sub-tokyo750w01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-tokyo750w01/anat/sub-tokyo750w01_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-tokyo750w01/anat/sub-tokyo750w01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-tokyo750w01/anat/sub-tokyo750w01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-tokyo750w01/anat/sub-tokyo750w01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-tokyo750w01/anat/sub-tokyo750w01_space-other_T2star_label-SC_seg.nii.gz b/derivatives/labels/sub-tokyo750w01/anat/sub-tokyo750w01_space-other_T2star_label-SC_seg.nii.gz index 2efa62d77e..642d1fc53a 100644 --- a/derivatives/labels/sub-tokyo750w01/anat/sub-tokyo750w01_space-other_T2star_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-tokyo750w01/anat/sub-tokyo750w01_space-other_T2star_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s10915--ee60919e5d07276675acbecd755833134b6666628615338fdfba48d8412fb4a6.nii.gz +/annex/objects/SHA256E-s45472--a10590ef04c6165095cc97aebf294ce735806e28024922a77c914158c73ff1cf.nii.gz diff --git a/derivatives/labels/sub-tokyo750w01/anat/sub-tokyo750w01_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-tokyo750w01/anat/sub-tokyo750w01_space-other_T2star_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-tokyo750w01/anat/sub-tokyo750w01_space-other_T2star_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-tokyo750w02/anat/sub-tokyo750w02_space-other_T1w_label-discs_dlabel.json b/derivatives/labels/sub-tokyo750w02/anat/sub-tokyo750w02_T1w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-tokyo750w02/anat/sub-tokyo750w02_space-other_T1w_label-discs_dlabel.json rename to derivatives/labels/sub-tokyo750w02/anat/sub-tokyo750w02_T1w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-tokyo750w02/anat/sub-tokyo750w02_space-other_T1w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-tokyo750w02/anat/sub-tokyo750w02_T1w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-tokyo750w02/anat/sub-tokyo750w02_space-other_T1w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-tokyo750w02/anat/sub-tokyo750w02_T1w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-tokyo750w02/anat/sub-tokyo750w02_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-tokyo750w02/anat/sub-tokyo750w02_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-tokyo750w02/anat/sub-tokyo750w02_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-tokyo750w02/anat/sub-tokyo750w02_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-tokyo750w02/anat/sub-tokyo750w02_T2star_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-tokyo750w02/anat/sub-tokyo750w02_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-tokyo750w02/anat/sub-tokyo750w02_T2star_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-tokyo750w02/anat/sub-tokyo750w02_space-other_T2w_label-discs_dlabel.json b/derivatives/labels/sub-tokyo750w02/anat/sub-tokyo750w02_T2w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-tokyo750w02/anat/sub-tokyo750w02_space-other_T2w_label-discs_dlabel.json rename to derivatives/labels/sub-tokyo750w02/anat/sub-tokyo750w02_T2w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-tokyo750w02/anat/sub-tokyo750w02_space-other_T2w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-tokyo750w02/anat/sub-tokyo750w02_T2w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-tokyo750w02/anat/sub-tokyo750w02_space-other_T2w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-tokyo750w02/anat/sub-tokyo750w02_T2w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-tokyo750w02/anat/sub-tokyo750w02_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-tokyo750w02/anat/sub-tokyo750w02_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-tokyo750w02/anat/sub-tokyo750w02_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-tokyo750w02/anat/sub-tokyo750w02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-tokyo750w02/anat/sub-tokyo750w02_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-tokyo750w02/anat/sub-tokyo750w02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-tokyo750w02/anat/sub-tokyo750w02_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-tokyo750w02/anat/sub-tokyo750w02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-tokyo750w02/anat/sub-tokyo750w02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-tokyo750w02/anat/sub-tokyo750w02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-tokyo750w02/anat/sub-tokyo750w02_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-tokyo750w02/anat/sub-tokyo750w02_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-tokyo750w02/anat/sub-tokyo750w02_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-tokyo750w02/anat/sub-tokyo750w02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-tokyo750w02/anat/sub-tokyo750w02_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-tokyo750w02/anat/sub-tokyo750w02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-tokyo750w02/anat/sub-tokyo750w02_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-tokyo750w02/anat/sub-tokyo750w02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-tokyo750w02/anat/sub-tokyo750w02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-tokyo750w02/anat/sub-tokyo750w02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-tokyo750w02/anat/sub-tokyo750w02_space-other_T2star_label-SC_seg.nii.gz b/derivatives/labels/sub-tokyo750w02/anat/sub-tokyo750w02_space-other_T2star_label-SC_seg.nii.gz index b5f4deff7a..7e02fa89e6 100644 --- a/derivatives/labels/sub-tokyo750w02/anat/sub-tokyo750w02_space-other_T2star_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-tokyo750w02/anat/sub-tokyo750w02_space-other_T2star_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s10842--de1d2b0371d4ac194dde3b2e6565fc10e9a800073071d75fb8bf877618d025d1.nii.gz +/annex/objects/SHA256E-s45266--fe2359292a2001994476f098cebea9f869582a8e3b600bd95ad957574faf2576.nii.gz diff --git a/derivatives/labels/sub-tokyo750w02/anat/sub-tokyo750w02_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-tokyo750w02/anat/sub-tokyo750w02_space-other_T2star_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-tokyo750w02/anat/sub-tokyo750w02_space-other_T2star_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-tokyo750w03/anat/sub-tokyo750w03_space-other_T1w_label-discs_dlabel.json b/derivatives/labels/sub-tokyo750w03/anat/sub-tokyo750w03_T1w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-tokyo750w03/anat/sub-tokyo750w03_space-other_T1w_label-discs_dlabel.json rename to derivatives/labels/sub-tokyo750w03/anat/sub-tokyo750w03_T1w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-tokyo750w03/anat/sub-tokyo750w03_space-other_T1w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-tokyo750w03/anat/sub-tokyo750w03_T1w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-tokyo750w03/anat/sub-tokyo750w03_space-other_T1w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-tokyo750w03/anat/sub-tokyo750w03_T1w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-tokyo750w03/anat/sub-tokyo750w03_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-tokyo750w03/anat/sub-tokyo750w03_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-tokyo750w03/anat/sub-tokyo750w03_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-tokyo750w03/anat/sub-tokyo750w03_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-tokyo750w03/anat/sub-tokyo750w03_T2star_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-tokyo750w03/anat/sub-tokyo750w03_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-tokyo750w03/anat/sub-tokyo750w03_T2star_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-tokyo750w03/anat/sub-tokyo750w03_space-other_T2w_label-discs_dlabel.json b/derivatives/labels/sub-tokyo750w03/anat/sub-tokyo750w03_T2w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-tokyo750w03/anat/sub-tokyo750w03_space-other_T2w_label-discs_dlabel.json rename to derivatives/labels/sub-tokyo750w03/anat/sub-tokyo750w03_T2w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-tokyo750w03/anat/sub-tokyo750w03_space-other_T2w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-tokyo750w03/anat/sub-tokyo750w03_T2w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-tokyo750w03/anat/sub-tokyo750w03_space-other_T2w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-tokyo750w03/anat/sub-tokyo750w03_T2w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-tokyo750w03/anat/sub-tokyo750w03_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-tokyo750w03/anat/sub-tokyo750w03_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-tokyo750w03/anat/sub-tokyo750w03_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-tokyo750w03/anat/sub-tokyo750w03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-tokyo750w03/anat/sub-tokyo750w03_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-tokyo750w03/anat/sub-tokyo750w03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-tokyo750w03/anat/sub-tokyo750w03_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-tokyo750w03/anat/sub-tokyo750w03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-tokyo750w03/anat/sub-tokyo750w03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-tokyo750w03/anat/sub-tokyo750w03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-tokyo750w03/anat/sub-tokyo750w03_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-tokyo750w03/anat/sub-tokyo750w03_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-tokyo750w03/anat/sub-tokyo750w03_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-tokyo750w03/anat/sub-tokyo750w03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-tokyo750w03/anat/sub-tokyo750w03_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-tokyo750w03/anat/sub-tokyo750w03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-tokyo750w03/anat/sub-tokyo750w03_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-tokyo750w03/anat/sub-tokyo750w03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-tokyo750w03/anat/sub-tokyo750w03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-tokyo750w03/anat/sub-tokyo750w03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-tokyo750w03/anat/sub-tokyo750w03_space-other_T2star_label-SC_seg.nii.gz b/derivatives/labels/sub-tokyo750w03/anat/sub-tokyo750w03_space-other_T2star_label-SC_seg.nii.gz index 5fdad7f6d6..d697776ddb 100644 --- a/derivatives/labels/sub-tokyo750w03/anat/sub-tokyo750w03_space-other_T2star_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-tokyo750w03/anat/sub-tokyo750w03_space-other_T2star_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s23676--623c2b902cffacf88bbfbe4b48e556efe192fd969bad8532269c51c860997854.nii.gz +/annex/objects/SHA256E-s23697--57d2f2236ef64c12ab9c265ab43929c080a9d70bab6c60bb3bf771701a7a7835.nii.gz diff --git a/derivatives/labels/sub-tokyo750w03/anat/sub-tokyo750w03_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-tokyo750w03/anat/sub-tokyo750w03_space-other_T2star_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-tokyo750w03/anat/sub-tokyo750w03_space-other_T2star_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-tokyo750w04/anat/sub-tokyo750w04_space-other_T1w_label-discs_dlabel.json b/derivatives/labels/sub-tokyo750w04/anat/sub-tokyo750w04_T1w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-tokyo750w04/anat/sub-tokyo750w04_space-other_T1w_label-discs_dlabel.json rename to derivatives/labels/sub-tokyo750w04/anat/sub-tokyo750w04_T1w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-tokyo750w04/anat/sub-tokyo750w04_space-other_T1w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-tokyo750w04/anat/sub-tokyo750w04_T1w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-tokyo750w04/anat/sub-tokyo750w04_space-other_T1w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-tokyo750w04/anat/sub-tokyo750w04_T1w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-tokyo750w04/anat/sub-tokyo750w04_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-tokyo750w04/anat/sub-tokyo750w04_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-tokyo750w04/anat/sub-tokyo750w04_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-tokyo750w04/anat/sub-tokyo750w04_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-tokyo750w04/anat/sub-tokyo750w04_T2star_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-tokyo750w04/anat/sub-tokyo750w04_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-tokyo750w04/anat/sub-tokyo750w04_T2star_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-tokyo750w04/anat/sub-tokyo750w04_space-other_T2w_label-discs_dlabel.json b/derivatives/labels/sub-tokyo750w04/anat/sub-tokyo750w04_T2w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-tokyo750w04/anat/sub-tokyo750w04_space-other_T2w_label-discs_dlabel.json rename to derivatives/labels/sub-tokyo750w04/anat/sub-tokyo750w04_T2w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-tokyo750w04/anat/sub-tokyo750w04_space-other_T2w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-tokyo750w04/anat/sub-tokyo750w04_T2w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-tokyo750w04/anat/sub-tokyo750w04_space-other_T2w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-tokyo750w04/anat/sub-tokyo750w04_T2w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-tokyo750w04/anat/sub-tokyo750w04_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-tokyo750w04/anat/sub-tokyo750w04_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-tokyo750w04/anat/sub-tokyo750w04_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-tokyo750w04/anat/sub-tokyo750w04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-tokyo750w04/anat/sub-tokyo750w04_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-tokyo750w04/anat/sub-tokyo750w04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-tokyo750w04/anat/sub-tokyo750w04_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-tokyo750w04/anat/sub-tokyo750w04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-tokyo750w04/anat/sub-tokyo750w04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-tokyo750w04/anat/sub-tokyo750w04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-tokyo750w04/anat/sub-tokyo750w04_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-tokyo750w04/anat/sub-tokyo750w04_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-tokyo750w04/anat/sub-tokyo750w04_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-tokyo750w04/anat/sub-tokyo750w04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-tokyo750w04/anat/sub-tokyo750w04_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-tokyo750w04/anat/sub-tokyo750w04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-tokyo750w04/anat/sub-tokyo750w04_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-tokyo750w04/anat/sub-tokyo750w04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-tokyo750w04/anat/sub-tokyo750w04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-tokyo750w04/anat/sub-tokyo750w04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-tokyo750w04/anat/sub-tokyo750w04_space-other_T2star_label-SC_seg.nii.gz b/derivatives/labels/sub-tokyo750w04/anat/sub-tokyo750w04_space-other_T2star_label-SC_seg.nii.gz index 0cabf8c282..7c6f441d9d 100644 --- a/derivatives/labels/sub-tokyo750w04/anat/sub-tokyo750w04_space-other_T2star_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-tokyo750w04/anat/sub-tokyo750w04_space-other_T2star_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s10757--d70fe1b413c77ffc10a39fa886455e1d9bdcd275a06f43e769d9a6e780bed7a4.nii.gz +/annex/objects/SHA256E-s45095--73bac5e7fdb74ac4ba89db3b8c68e8777e4334ceb91116f39e8df61a38951616.nii.gz diff --git a/derivatives/labels/sub-tokyo750w04/anat/sub-tokyo750w04_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-tokyo750w04/anat/sub-tokyo750w04_space-other_T2star_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-tokyo750w04/anat/sub-tokyo750w04_space-other_T2star_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-tokyo750w05/anat/sub-tokyo750w05_space-other_T1w_label-discs_dlabel.json b/derivatives/labels/sub-tokyo750w05/anat/sub-tokyo750w05_T1w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-tokyo750w05/anat/sub-tokyo750w05_space-other_T1w_label-discs_dlabel.json rename to derivatives/labels/sub-tokyo750w05/anat/sub-tokyo750w05_T1w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-tokyo750w05/anat/sub-tokyo750w05_space-other_T1w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-tokyo750w05/anat/sub-tokyo750w05_T1w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-tokyo750w05/anat/sub-tokyo750w05_space-other_T1w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-tokyo750w05/anat/sub-tokyo750w05_T1w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-tokyo750w05/anat/sub-tokyo750w05_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-tokyo750w05/anat/sub-tokyo750w05_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-tokyo750w05/anat/sub-tokyo750w05_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-tokyo750w05/anat/sub-tokyo750w05_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-tokyo750w05/anat/sub-tokyo750w05_T2star_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-tokyo750w05/anat/sub-tokyo750w05_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-tokyo750w05/anat/sub-tokyo750w05_T2star_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-tokyo750w05/anat/sub-tokyo750w05_space-other_T2w_label-discs_dlabel.json b/derivatives/labels/sub-tokyo750w05/anat/sub-tokyo750w05_T2w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-tokyo750w05/anat/sub-tokyo750w05_space-other_T2w_label-discs_dlabel.json rename to derivatives/labels/sub-tokyo750w05/anat/sub-tokyo750w05_T2w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-tokyo750w05/anat/sub-tokyo750w05_space-other_T2w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-tokyo750w05/anat/sub-tokyo750w05_T2w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-tokyo750w05/anat/sub-tokyo750w05_space-other_T2w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-tokyo750w05/anat/sub-tokyo750w05_T2w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-tokyo750w05/anat/sub-tokyo750w05_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-tokyo750w05/anat/sub-tokyo750w05_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-tokyo750w05/anat/sub-tokyo750w05_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-tokyo750w05/anat/sub-tokyo750w05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-tokyo750w05/anat/sub-tokyo750w05_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-tokyo750w05/anat/sub-tokyo750w05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-tokyo750w05/anat/sub-tokyo750w05_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-tokyo750w05/anat/sub-tokyo750w05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-tokyo750w05/anat/sub-tokyo750w05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-tokyo750w05/anat/sub-tokyo750w05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-tokyo750w05/anat/sub-tokyo750w05_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-tokyo750w05/anat/sub-tokyo750w05_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-tokyo750w05/anat/sub-tokyo750w05_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-tokyo750w05/anat/sub-tokyo750w05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-tokyo750w05/anat/sub-tokyo750w05_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-tokyo750w05/anat/sub-tokyo750w05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-tokyo750w05/anat/sub-tokyo750w05_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-tokyo750w05/anat/sub-tokyo750w05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-tokyo750w05/anat/sub-tokyo750w05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-tokyo750w05/anat/sub-tokyo750w05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-tokyo750w05/anat/sub-tokyo750w05_space-other_T2star_gmlabel-SC_seg.nii.gz b/derivatives/labels/sub-tokyo750w05/anat/sub-tokyo750w05_space-other_T2star_gmlabel-SC_seg.nii.gz index 778db5d985..db5cc37387 100644 --- a/derivatives/labels/sub-tokyo750w05/anat/sub-tokyo750w05_space-other_T2star_gmlabel-SC_seg.nii.gz +++ b/derivatives/labels/sub-tokyo750w05/anat/sub-tokyo750w05_space-other_T2star_gmlabel-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s170952--d06453d9576255b5fe37de6885eaccc55d80ce736f132bd1f1cf5ad224987f46.nii.gz +/annex/objects/SHA256E-s170971--5e464058a1fa3c47088440b52405c672f8b73cf245c51634be3fd7e2fc0c3a93.nii.gz diff --git a/derivatives/labels/sub-tokyo750w05/anat/sub-tokyo750w05_space-other_T2star_label-SC_seg.nii.gz b/derivatives/labels/sub-tokyo750w05/anat/sub-tokyo750w05_space-other_T2star_label-SC_seg.nii.gz index 1d328bb7d9..8cfd16eaef 100644 --- a/derivatives/labels/sub-tokyo750w05/anat/sub-tokyo750w05_space-other_T2star_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-tokyo750w05/anat/sub-tokyo750w05_space-other_T2star_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s23592--c6fa1e4f39e80a09837d920e8b59cbfc81cfac45e54323af4658218210a69953.nii.gz +/annex/objects/SHA256E-s23613--0e8f6ed786009e5bed343c04a90398520c99efd16b6455f36426a4d690dc0852.nii.gz diff --git a/derivatives/labels/sub-tokyo750w05/anat/sub-tokyo750w05_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-tokyo750w05/anat/sub-tokyo750w05_space-other_T2star_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-tokyo750w05/anat/sub-tokyo750w05_space-other_T2star_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-tokyo750w06/anat/sub-tokyo750w06_space-other_T1w_label-discs_dlabel.json b/derivatives/labels/sub-tokyo750w06/anat/sub-tokyo750w06_T1w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-tokyo750w06/anat/sub-tokyo750w06_space-other_T1w_label-discs_dlabel.json rename to derivatives/labels/sub-tokyo750w06/anat/sub-tokyo750w06_T1w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-tokyo750w06/anat/sub-tokyo750w06_space-other_T1w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-tokyo750w06/anat/sub-tokyo750w06_T1w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-tokyo750w06/anat/sub-tokyo750w06_space-other_T1w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-tokyo750w06/anat/sub-tokyo750w06_T1w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-tokyo750w06/anat/sub-tokyo750w06_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-tokyo750w06/anat/sub-tokyo750w06_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-tokyo750w06/anat/sub-tokyo750w06_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-tokyo750w06/anat/sub-tokyo750w06_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-tokyo750w06/anat/sub-tokyo750w06_T2star_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-tokyo750w06/anat/sub-tokyo750w06_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-tokyo750w06/anat/sub-tokyo750w06_T2star_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-tokyo750w06/anat/sub-tokyo750w06_space-other_T2w_label-discs_dlabel.json b/derivatives/labels/sub-tokyo750w06/anat/sub-tokyo750w06_T2w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-tokyo750w06/anat/sub-tokyo750w06_space-other_T2w_label-discs_dlabel.json rename to derivatives/labels/sub-tokyo750w06/anat/sub-tokyo750w06_T2w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-tokyo750w06/anat/sub-tokyo750w06_space-other_T2w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-tokyo750w06/anat/sub-tokyo750w06_T2w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-tokyo750w06/anat/sub-tokyo750w06_space-other_T2w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-tokyo750w06/anat/sub-tokyo750w06_T2w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-tokyo750w06/anat/sub-tokyo750w06_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-tokyo750w06/anat/sub-tokyo750w06_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-tokyo750w06/anat/sub-tokyo750w06_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-tokyo750w06/anat/sub-tokyo750w06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-tokyo750w06/anat/sub-tokyo750w06_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-tokyo750w06/anat/sub-tokyo750w06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-tokyo750w06/anat/sub-tokyo750w06_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-tokyo750w06/anat/sub-tokyo750w06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-tokyo750w06/anat/sub-tokyo750w06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-tokyo750w06/anat/sub-tokyo750w06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-tokyo750w06/anat/sub-tokyo750w06_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-tokyo750w06/anat/sub-tokyo750w06_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-tokyo750w06/anat/sub-tokyo750w06_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-tokyo750w06/anat/sub-tokyo750w06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-tokyo750w06/anat/sub-tokyo750w06_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-tokyo750w06/anat/sub-tokyo750w06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-tokyo750w06/anat/sub-tokyo750w06_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-tokyo750w06/anat/sub-tokyo750w06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-tokyo750w06/anat/sub-tokyo750w06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-tokyo750w06/anat/sub-tokyo750w06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-tokyo750w06/anat/sub-tokyo750w06_space-other_T2star_gmlabel-SC_seg.nii.gz b/derivatives/labels/sub-tokyo750w06/anat/sub-tokyo750w06_space-other_T2star_gmlabel-SC_seg.nii.gz index a8b82ba97e..2dee6a714b 100644 --- a/derivatives/labels/sub-tokyo750w06/anat/sub-tokyo750w06_space-other_T2star_gmlabel-SC_seg.nii.gz +++ b/derivatives/labels/sub-tokyo750w06/anat/sub-tokyo750w06_space-other_T2star_gmlabel-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s171134--d2c20cc61027f6fec0eb354b27b8620c5020824d71eb4d1ed76a5bb97825da6e.nii.gz +/annex/objects/SHA256E-s171153--8b382de9a1e167ce3893c034235ca290e4d445bba8c0f9bb169c33e291b23efd.nii.gz diff --git a/derivatives/labels/sub-tokyo750w06/anat/sub-tokyo750w06_space-other_T2star_label-SC_seg.nii.gz b/derivatives/labels/sub-tokyo750w06/anat/sub-tokyo750w06_space-other_T2star_label-SC_seg.nii.gz index 3bf203947e..85c95ff85e 100644 --- a/derivatives/labels/sub-tokyo750w06/anat/sub-tokyo750w06_space-other_T2star_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-tokyo750w06/anat/sub-tokyo750w06_space-other_T2star_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s23657--5b2e77e79ee1a07798dcd24569ab5f7055b1298f522537463c2b2d89114f56c3.nii.gz +/annex/objects/SHA256E-s23678--a999d93036e9aeaac35e3a2e0333cbbe8d70f309cab26e196ff1ebd6186c6588.nii.gz diff --git a/derivatives/labels/sub-tokyo750w06/anat/sub-tokyo750w06_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-tokyo750w06/anat/sub-tokyo750w06_space-other_T2star_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-tokyo750w06/anat/sub-tokyo750w06_space-other_T2star_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-tokyo750w07/anat/sub-tokyo750w07_space-other_T1w_label-discs_dlabel.json b/derivatives/labels/sub-tokyo750w07/anat/sub-tokyo750w07_T1w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-tokyo750w07/anat/sub-tokyo750w07_space-other_T1w_label-discs_dlabel.json rename to derivatives/labels/sub-tokyo750w07/anat/sub-tokyo750w07_T1w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-tokyo750w07/anat/sub-tokyo750w07_space-other_T1w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-tokyo750w07/anat/sub-tokyo750w07_T1w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-tokyo750w07/anat/sub-tokyo750w07_space-other_T1w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-tokyo750w07/anat/sub-tokyo750w07_T1w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-tokyo750w07/anat/sub-tokyo750w07_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-tokyo750w07/anat/sub-tokyo750w07_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-tokyo750w07/anat/sub-tokyo750w07_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-tokyo750w07/anat/sub-tokyo750w07_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-tokyo750w07/anat/sub-tokyo750w07_T2star_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-tokyo750w07/anat/sub-tokyo750w07_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-tokyo750w07/anat/sub-tokyo750w07_T2star_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-tokyo750w07/anat/sub-tokyo750w07_space-other_T2w_label-discs_dlabel.json b/derivatives/labels/sub-tokyo750w07/anat/sub-tokyo750w07_T2w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-tokyo750w07/anat/sub-tokyo750w07_space-other_T2w_label-discs_dlabel.json rename to derivatives/labels/sub-tokyo750w07/anat/sub-tokyo750w07_T2w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-tokyo750w07/anat/sub-tokyo750w07_space-other_T2w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-tokyo750w07/anat/sub-tokyo750w07_T2w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-tokyo750w07/anat/sub-tokyo750w07_space-other_T2w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-tokyo750w07/anat/sub-tokyo750w07_T2w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-tokyo750w07/anat/sub-tokyo750w07_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-tokyo750w07/anat/sub-tokyo750w07_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-tokyo750w07/anat/sub-tokyo750w07_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-tokyo750w07/anat/sub-tokyo750w07_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-tokyo750w07/anat/sub-tokyo750w07_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-tokyo750w07/anat/sub-tokyo750w07_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-tokyo750w07/anat/sub-tokyo750w07_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-tokyo750w07/anat/sub-tokyo750w07_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-tokyo750w07/anat/sub-tokyo750w07_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-tokyo750w07/anat/sub-tokyo750w07_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-tokyo750w07/anat/sub-tokyo750w07_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-tokyo750w07/anat/sub-tokyo750w07_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-tokyo750w07/anat/sub-tokyo750w07_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-tokyo750w07/anat/sub-tokyo750w07_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-tokyo750w07/anat/sub-tokyo750w07_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-tokyo750w07/anat/sub-tokyo750w07_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-tokyo750w07/anat/sub-tokyo750w07_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-tokyo750w07/anat/sub-tokyo750w07_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-tokyo750w07/anat/sub-tokyo750w07_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-tokyo750w07/anat/sub-tokyo750w07_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-tokyo750w07/anat/sub-tokyo750w07_space-other_T2star_label-SC_seg.nii.gz b/derivatives/labels/sub-tokyo750w07/anat/sub-tokyo750w07_space-other_T2star_label-SC_seg.nii.gz index 561c2eca20..8bc3375c58 100644 --- a/derivatives/labels/sub-tokyo750w07/anat/sub-tokyo750w07_space-other_T2star_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-tokyo750w07/anat/sub-tokyo750w07_space-other_T2star_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s23817--f9412b11a6cbfdce4a929a4cb4c9650deb71e9101e4a9842023c60fbc9993d10.nii.gz +/annex/objects/SHA256E-s23838--4fbddc1c6dd9e2974fe075430432dd9e7aa6656d6f81d9ee98c550579c853b16.nii.gz diff --git a/derivatives/labels/sub-tokyo750w07/anat/sub-tokyo750w07_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-tokyo750w07/anat/sub-tokyo750w07_space-other_T2star_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-tokyo750w07/anat/sub-tokyo750w07_space-other_T2star_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-tokyoIngenia01/anat/sub-tokyoIngenia01_space-other_T1w_label-discs_dlabel.json b/derivatives/labels/sub-tokyoIngenia01/anat/sub-tokyoIngenia01_T1w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-tokyoIngenia01/anat/sub-tokyoIngenia01_space-other_T1w_label-discs_dlabel.json rename to derivatives/labels/sub-tokyoIngenia01/anat/sub-tokyoIngenia01_T1w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-tokyoIngenia01/anat/sub-tokyoIngenia01_space-other_T1w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-tokyoIngenia01/anat/sub-tokyoIngenia01_T1w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-tokyoIngenia01/anat/sub-tokyoIngenia01_space-other_T1w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-tokyoIngenia01/anat/sub-tokyoIngenia01_T1w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-tokyoIngenia01/anat/sub-tokyoIngenia01_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-tokyoIngenia01/anat/sub-tokyoIngenia01_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-tokyoIngenia01/anat/sub-tokyoIngenia01_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-tokyoIngenia01/anat/sub-tokyoIngenia01_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-tokyoIngenia01/anat/sub-tokyoIngenia01_T2star_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-tokyoIngenia01/anat/sub-tokyoIngenia01_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-tokyoIngenia01/anat/sub-tokyoIngenia01_T2star_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-tokyoIngenia01/anat/sub-tokyoIngenia01_space-other_T2w_label-discs_dlabel.json b/derivatives/labels/sub-tokyoIngenia01/anat/sub-tokyoIngenia01_T2w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-tokyoIngenia01/anat/sub-tokyoIngenia01_space-other_T2w_label-discs_dlabel.json rename to derivatives/labels/sub-tokyoIngenia01/anat/sub-tokyoIngenia01_T2w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-tokyoIngenia01/anat/sub-tokyoIngenia01_space-other_T2w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-tokyoIngenia01/anat/sub-tokyoIngenia01_T2w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-tokyoIngenia01/anat/sub-tokyoIngenia01_space-other_T2w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-tokyoIngenia01/anat/sub-tokyoIngenia01_T2w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-tokyoIngenia01/anat/sub-tokyoIngenia01_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-tokyoIngenia01/anat/sub-tokyoIngenia01_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-tokyoIngenia01/anat/sub-tokyoIngenia01_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-tokyoIngenia01/anat/sub-tokyoIngenia01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-tokyoIngenia01/anat/sub-tokyoIngenia01_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-tokyoIngenia01/anat/sub-tokyoIngenia01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-tokyoIngenia01/anat/sub-tokyoIngenia01_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-tokyoIngenia01/anat/sub-tokyoIngenia01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-tokyoIngenia01/anat/sub-tokyoIngenia01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-tokyoIngenia01/anat/sub-tokyoIngenia01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-tokyoIngenia01/anat/sub-tokyoIngenia01_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-tokyoIngenia01/anat/sub-tokyoIngenia01_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-tokyoIngenia01/anat/sub-tokyoIngenia01_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-tokyoIngenia01/anat/sub-tokyoIngenia01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-tokyoIngenia01/anat/sub-tokyoIngenia01_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-tokyoIngenia01/anat/sub-tokyoIngenia01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-tokyoIngenia01/anat/sub-tokyoIngenia01_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-tokyoIngenia01/anat/sub-tokyoIngenia01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-tokyoIngenia01/anat/sub-tokyoIngenia01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-tokyoIngenia01/anat/sub-tokyoIngenia01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-tokyoIngenia01/anat/sub-tokyoIngenia01_space-other_T2star_gmlabel-SC_seg.nii.gz b/derivatives/labels/sub-tokyoIngenia01/anat/sub-tokyoIngenia01_space-other_T2star_gmlabel-SC_seg.nii.gz index ca40a6be49..0758b04c86 100644 --- a/derivatives/labels/sub-tokyoIngenia01/anat/sub-tokyoIngenia01_space-other_T2star_gmlabel-SC_seg.nii.gz +++ b/derivatives/labels/sub-tokyoIngenia01/anat/sub-tokyoIngenia01_space-other_T2star_gmlabel-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s55516--04358771977190e88baf7a314a3686fc238fe3699918daf81741f60d88c58bf8.nii.gz +/annex/objects/SHA256E-s55538--e99369d4f808a509a49514096e3a7c8f32c97e9db7ba062a0a15b408736b02a8.nii.gz diff --git a/derivatives/labels/sub-tokyoIngenia01/anat/sub-tokyoIngenia01_space-other_T2star_label-SC_seg.nii.gz b/derivatives/labels/sub-tokyoIngenia01/anat/sub-tokyoIngenia01_space-other_T2star_label-SC_seg.nii.gz index d4a0eda7fe..859f524bfb 100644 --- a/derivatives/labels/sub-tokyoIngenia01/anat/sub-tokyoIngenia01_space-other_T2star_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-tokyoIngenia01/anat/sub-tokyoIngenia01_space-other_T2star_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s8362--06b5b931c36f0125b161e86639d03f6976050db891ea1ca83ab86b6f0980de3c.nii.gz +/annex/objects/SHA256E-s8383--0c8e808dcae360be67bb2aafb77be61b6d4907a5f88f4548ebc11c89d4144ffa.nii.gz diff --git a/derivatives/labels/sub-tokyoIngenia01/anat/sub-tokyoIngenia01_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-tokyoIngenia01/anat/sub-tokyoIngenia01_space-other_T2star_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-tokyoIngenia01/anat/sub-tokyoIngenia01_space-other_T2star_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-tokyoIngenia02/anat/sub-tokyoIngenia02_space-other_T1w_label-discs_dlabel.json b/derivatives/labels/sub-tokyoIngenia02/anat/sub-tokyoIngenia02_T1w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-tokyoIngenia02/anat/sub-tokyoIngenia02_space-other_T1w_label-discs_dlabel.json rename to derivatives/labels/sub-tokyoIngenia02/anat/sub-tokyoIngenia02_T1w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-tokyoIngenia02/anat/sub-tokyoIngenia02_space-other_T1w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-tokyoIngenia02/anat/sub-tokyoIngenia02_T1w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-tokyoIngenia02/anat/sub-tokyoIngenia02_space-other_T1w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-tokyoIngenia02/anat/sub-tokyoIngenia02_T1w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-tokyoIngenia02/anat/sub-tokyoIngenia02_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-tokyoIngenia02/anat/sub-tokyoIngenia02_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-tokyoIngenia02/anat/sub-tokyoIngenia02_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-tokyoIngenia02/anat/sub-tokyoIngenia02_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-tokyoIngenia02/anat/sub-tokyoIngenia02_T2star_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-tokyoIngenia02/anat/sub-tokyoIngenia02_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-tokyoIngenia02/anat/sub-tokyoIngenia02_T2star_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-tokyoIngenia02/anat/sub-tokyoIngenia02_space-other_T2w_label-discs_dlabel.json b/derivatives/labels/sub-tokyoIngenia02/anat/sub-tokyoIngenia02_T2w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-tokyoIngenia02/anat/sub-tokyoIngenia02_space-other_T2w_label-discs_dlabel.json rename to derivatives/labels/sub-tokyoIngenia02/anat/sub-tokyoIngenia02_T2w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-tokyoIngenia02/anat/sub-tokyoIngenia02_space-other_T2w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-tokyoIngenia02/anat/sub-tokyoIngenia02_T2w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-tokyoIngenia02/anat/sub-tokyoIngenia02_space-other_T2w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-tokyoIngenia02/anat/sub-tokyoIngenia02_T2w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-tokyoIngenia02/anat/sub-tokyoIngenia02_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-tokyoIngenia02/anat/sub-tokyoIngenia02_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-tokyoIngenia02/anat/sub-tokyoIngenia02_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-tokyoIngenia02/anat/sub-tokyoIngenia02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-tokyoIngenia02/anat/sub-tokyoIngenia02_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-tokyoIngenia02/anat/sub-tokyoIngenia02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-tokyoIngenia02/anat/sub-tokyoIngenia02_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-tokyoIngenia02/anat/sub-tokyoIngenia02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-tokyoIngenia02/anat/sub-tokyoIngenia02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-tokyoIngenia02/anat/sub-tokyoIngenia02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-tokyoIngenia02/anat/sub-tokyoIngenia02_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-tokyoIngenia02/anat/sub-tokyoIngenia02_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-tokyoIngenia02/anat/sub-tokyoIngenia02_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-tokyoIngenia02/anat/sub-tokyoIngenia02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-tokyoIngenia02/anat/sub-tokyoIngenia02_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-tokyoIngenia02/anat/sub-tokyoIngenia02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-tokyoIngenia02/anat/sub-tokyoIngenia02_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-tokyoIngenia02/anat/sub-tokyoIngenia02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-tokyoIngenia02/anat/sub-tokyoIngenia02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-tokyoIngenia02/anat/sub-tokyoIngenia02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-tokyoIngenia02/anat/sub-tokyoIngenia02_space-other_T2star_gmlabel-SC_seg.nii.gz b/derivatives/labels/sub-tokyoIngenia02/anat/sub-tokyoIngenia02_space-other_T2star_gmlabel-SC_seg.nii.gz index 154aecc4ea..d699fe1502 100644 --- a/derivatives/labels/sub-tokyoIngenia02/anat/sub-tokyoIngenia02_space-other_T2star_gmlabel-SC_seg.nii.gz +++ b/derivatives/labels/sub-tokyoIngenia02/anat/sub-tokyoIngenia02_space-other_T2star_gmlabel-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s55238--568afcb217e24f492bbf80307857475188955ec72d98bef8a9f0f5a2218ea0b0.nii.gz +/annex/objects/SHA256E-s55260--3b8002dc053284b955c92d0ad6859dff62476b32d78775c869cee7a291debdd1.nii.gz diff --git a/derivatives/labels/sub-tokyoIngenia02/anat/sub-tokyoIngenia02_space-other_T2star_label-SC_seg.nii.gz b/derivatives/labels/sub-tokyoIngenia02/anat/sub-tokyoIngenia02_space-other_T2star_label-SC_seg.nii.gz index 6ff6b22ca7..c1227fe3eb 100644 --- a/derivatives/labels/sub-tokyoIngenia02/anat/sub-tokyoIngenia02_space-other_T2star_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-tokyoIngenia02/anat/sub-tokyoIngenia02_space-other_T2star_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s8180--514daf0c77777bf0e2b0eacdbcf65d55d196965091ea49deabad1c2993d6694e.nii.gz +/annex/objects/SHA256E-s8201--d24f9e7d283121091b5f18bf59d27168d3701485f9441b9681e055f62edca86b.nii.gz diff --git a/derivatives/labels/sub-tokyoIngenia02/anat/sub-tokyoIngenia02_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-tokyoIngenia02/anat/sub-tokyoIngenia02_space-other_T2star_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-tokyoIngenia02/anat/sub-tokyoIngenia02_space-other_T2star_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-tokyoIngenia03/anat/sub-tokyoIngenia03_space-other_T1w_label-discs_dlabel.json b/derivatives/labels/sub-tokyoIngenia03/anat/sub-tokyoIngenia03_T1w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-tokyoIngenia03/anat/sub-tokyoIngenia03_space-other_T1w_label-discs_dlabel.json rename to derivatives/labels/sub-tokyoIngenia03/anat/sub-tokyoIngenia03_T1w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-tokyoIngenia03/anat/sub-tokyoIngenia03_space-other_T1w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-tokyoIngenia03/anat/sub-tokyoIngenia03_T1w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-tokyoIngenia03/anat/sub-tokyoIngenia03_space-other_T1w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-tokyoIngenia03/anat/sub-tokyoIngenia03_T1w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-tokyoIngenia03/anat/sub-tokyoIngenia03_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-tokyoIngenia03/anat/sub-tokyoIngenia03_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-tokyoIngenia03/anat/sub-tokyoIngenia03_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-tokyoIngenia03/anat/sub-tokyoIngenia03_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-tokyoIngenia03/anat/sub-tokyoIngenia03_T2star_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-tokyoIngenia03/anat/sub-tokyoIngenia03_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-tokyoIngenia03/anat/sub-tokyoIngenia03_T2star_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-tokyoIngenia03/anat/sub-tokyoIngenia03_space-other_T2w_label-discs_dlabel.json b/derivatives/labels/sub-tokyoIngenia03/anat/sub-tokyoIngenia03_T2w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-tokyoIngenia03/anat/sub-tokyoIngenia03_space-other_T2w_label-discs_dlabel.json rename to derivatives/labels/sub-tokyoIngenia03/anat/sub-tokyoIngenia03_T2w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-tokyoIngenia03/anat/sub-tokyoIngenia03_space-other_T2w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-tokyoIngenia03/anat/sub-tokyoIngenia03_T2w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-tokyoIngenia03/anat/sub-tokyoIngenia03_space-other_T2w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-tokyoIngenia03/anat/sub-tokyoIngenia03_T2w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-tokyoIngenia03/anat/sub-tokyoIngenia03_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-tokyoIngenia03/anat/sub-tokyoIngenia03_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-tokyoIngenia03/anat/sub-tokyoIngenia03_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-tokyoIngenia03/anat/sub-tokyoIngenia03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-tokyoIngenia03/anat/sub-tokyoIngenia03_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-tokyoIngenia03/anat/sub-tokyoIngenia03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-tokyoIngenia03/anat/sub-tokyoIngenia03_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-tokyoIngenia03/anat/sub-tokyoIngenia03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-tokyoIngenia03/anat/sub-tokyoIngenia03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-tokyoIngenia03/anat/sub-tokyoIngenia03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-tokyoIngenia03/anat/sub-tokyoIngenia03_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-tokyoIngenia03/anat/sub-tokyoIngenia03_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-tokyoIngenia03/anat/sub-tokyoIngenia03_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-tokyoIngenia03/anat/sub-tokyoIngenia03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-tokyoIngenia03/anat/sub-tokyoIngenia03_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-tokyoIngenia03/anat/sub-tokyoIngenia03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-tokyoIngenia03/anat/sub-tokyoIngenia03_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-tokyoIngenia03/anat/sub-tokyoIngenia03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-tokyoIngenia03/anat/sub-tokyoIngenia03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-tokyoIngenia03/anat/sub-tokyoIngenia03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-tokyoIngenia03/anat/sub-tokyoIngenia03_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.json b/derivatives/labels/sub-tokyoIngenia03/anat/sub-tokyoIngenia03_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.json new file mode 100644 index 0000000000..e537a137e5 --- /dev/null +++ b/derivatives/labels/sub-tokyoIngenia03/anat/sub-tokyoIngenia03_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.json @@ -0,0 +1,11 @@ +{ + "SpatialReference": { + "Orientation": "RPI", + "Resampling": "1x1x1" + }, + "GeneratedBy": [ + { + "Description": "Manual label of C2 and C5 mid-vertebrae, at the center of the spinal cord." + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-tokyoIngenia03/anat/sub-tokyoIngenia03_space-other_T1w_RPI_r_labels-manual.nii.gz b/derivatives/labels/sub-tokyoIngenia03/anat/sub-tokyoIngenia03_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-tokyoIngenia03/anat/sub-tokyoIngenia03_space-other_T1w_RPI_r_labels-manual.nii.gz rename to derivatives/labels/sub-tokyoIngenia03/anat/sub-tokyoIngenia03_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.nii.gz diff --git a/derivatives/labels/sub-tokyoIngenia03/anat/sub-tokyoIngenia03_space-other_T2star_gmlabel-SC_seg.nii.gz b/derivatives/labels/sub-tokyoIngenia03/anat/sub-tokyoIngenia03_space-other_T2star_gmlabel-SC_seg.nii.gz index 67a7d471ef..adf27ce482 100644 --- a/derivatives/labels/sub-tokyoIngenia03/anat/sub-tokyoIngenia03_space-other_T2star_gmlabel-SC_seg.nii.gz +++ b/derivatives/labels/sub-tokyoIngenia03/anat/sub-tokyoIngenia03_space-other_T2star_gmlabel-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s14778--65b19debcdce79e2724e439437ffe8d83949e15ec4a130ded5347a8e4d36a64d.nii.gz +/annex/objects/SHA256E-s14790--e951fc9cdf39e8b46906c3e213e361fcd15d584f8363a1f90882db69999659bf.nii.gz diff --git a/derivatives/labels/sub-tokyoIngenia03/anat/sub-tokyoIngenia03_space-other_T2star_label-SC_seg.nii.gz b/derivatives/labels/sub-tokyoIngenia03/anat/sub-tokyoIngenia03_space-other_T2star_label-SC_seg.nii.gz index 53eb2ea393..7d3d1422d7 100644 --- a/derivatives/labels/sub-tokyoIngenia03/anat/sub-tokyoIngenia03_space-other_T2star_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-tokyoIngenia03/anat/sub-tokyoIngenia03_space-other_T2star_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s8300--0be574e06fc0e5415c047a68ce5cc516add7df2d1a213558eea45af9fb6a9cef.nii.gz +/annex/objects/SHA256E-s8321--336c0af18a79c3ea4312a030f408ce99aea03df4aeba29aec50c5e6f405288ed.nii.gz diff --git a/derivatives/labels/sub-tokyoIngenia03/anat/sub-tokyoIngenia03_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-tokyoIngenia03/anat/sub-tokyoIngenia03_space-other_T2star_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-tokyoIngenia03/anat/sub-tokyoIngenia03_space-other_T2star_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-tokyoIngenia04/anat/sub-tokyoIngenia04_space-other_T1w_label-discs_dlabel.json b/derivatives/labels/sub-tokyoIngenia04/anat/sub-tokyoIngenia04_T1w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-tokyoIngenia04/anat/sub-tokyoIngenia04_space-other_T1w_label-discs_dlabel.json rename to derivatives/labels/sub-tokyoIngenia04/anat/sub-tokyoIngenia04_T1w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-tokyoIngenia04/anat/sub-tokyoIngenia04_space-other_T1w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-tokyoIngenia04/anat/sub-tokyoIngenia04_T1w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-tokyoIngenia04/anat/sub-tokyoIngenia04_space-other_T1w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-tokyoIngenia04/anat/sub-tokyoIngenia04_T1w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-tokyoIngenia04/anat/sub-tokyoIngenia04_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-tokyoIngenia04/anat/sub-tokyoIngenia04_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-tokyoIngenia04/anat/sub-tokyoIngenia04_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-tokyoIngenia04/anat/sub-tokyoIngenia04_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-tokyoIngenia04/anat/sub-tokyoIngenia04_T2star_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-tokyoIngenia04/anat/sub-tokyoIngenia04_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-tokyoIngenia04/anat/sub-tokyoIngenia04_T2star_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-tokyoIngenia04/anat/sub-tokyoIngenia04_space-other_T2w_label-discs_dlabel.json b/derivatives/labels/sub-tokyoIngenia04/anat/sub-tokyoIngenia04_T2w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-tokyoIngenia04/anat/sub-tokyoIngenia04_space-other_T2w_label-discs_dlabel.json rename to derivatives/labels/sub-tokyoIngenia04/anat/sub-tokyoIngenia04_T2w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-tokyoIngenia04/anat/sub-tokyoIngenia04_space-other_T2w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-tokyoIngenia04/anat/sub-tokyoIngenia04_T2w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-tokyoIngenia04/anat/sub-tokyoIngenia04_space-other_T2w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-tokyoIngenia04/anat/sub-tokyoIngenia04_T2w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-tokyoIngenia04/anat/sub-tokyoIngenia04_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-tokyoIngenia04/anat/sub-tokyoIngenia04_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-tokyoIngenia04/anat/sub-tokyoIngenia04_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-tokyoIngenia04/anat/sub-tokyoIngenia04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-tokyoIngenia04/anat/sub-tokyoIngenia04_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-tokyoIngenia04/anat/sub-tokyoIngenia04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-tokyoIngenia04/anat/sub-tokyoIngenia04_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-tokyoIngenia04/anat/sub-tokyoIngenia04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-tokyoIngenia04/anat/sub-tokyoIngenia04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-tokyoIngenia04/anat/sub-tokyoIngenia04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-tokyoIngenia04/anat/sub-tokyoIngenia04_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-tokyoIngenia04/anat/sub-tokyoIngenia04_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-tokyoIngenia04/anat/sub-tokyoIngenia04_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-tokyoIngenia04/anat/sub-tokyoIngenia04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-tokyoIngenia04/anat/sub-tokyoIngenia04_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-tokyoIngenia04/anat/sub-tokyoIngenia04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-tokyoIngenia04/anat/sub-tokyoIngenia04_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-tokyoIngenia04/anat/sub-tokyoIngenia04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-tokyoIngenia04/anat/sub-tokyoIngenia04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-tokyoIngenia04/anat/sub-tokyoIngenia04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-tokyoIngenia04/anat/sub-tokyoIngenia04_space-other_T2star_gmlabel-SC_seg.nii.gz b/derivatives/labels/sub-tokyoIngenia04/anat/sub-tokyoIngenia04_space-other_T2star_gmlabel-SC_seg.nii.gz index d7624018dd..9c9b407ca3 100644 --- a/derivatives/labels/sub-tokyoIngenia04/anat/sub-tokyoIngenia04_space-other_T2star_gmlabel-SC_seg.nii.gz +++ b/derivatives/labels/sub-tokyoIngenia04/anat/sub-tokyoIngenia04_space-other_T2star_gmlabel-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s54985--4ab7434e70dc5290e739a4012d36dab587d5a93edb380ed0a59a37d0b75c2ce9.nii.gz +/annex/objects/SHA256E-s55009--3b6930104eb0140411e54690f6fe6933f641d62e29d309684fe09efce98a247c.nii.gz diff --git a/derivatives/labels/sub-tokyoIngenia04/anat/sub-tokyoIngenia04_space-other_T2star_label-SC_seg.nii.gz b/derivatives/labels/sub-tokyoIngenia04/anat/sub-tokyoIngenia04_space-other_T2star_label-SC_seg.nii.gz index 8db258e16d..c6d5c80bb8 100644 --- a/derivatives/labels/sub-tokyoIngenia04/anat/sub-tokyoIngenia04_space-other_T2star_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-tokyoIngenia04/anat/sub-tokyoIngenia04_space-other_T2star_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s3907--364f30b2bdddcfd0308d6fdf5ed7dbb42113ecbf2f853943cd1aeecc5ff7bed2.nii.gz +/annex/objects/SHA256E-s15319--70eec24a04001c19c5284624f6a54e78c5561bf21765d2bcc9579177e807efd4.nii.gz diff --git a/derivatives/labels/sub-tokyoIngenia04/anat/sub-tokyoIngenia04_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-tokyoIngenia04/anat/sub-tokyoIngenia04_space-other_T2star_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-tokyoIngenia04/anat/sub-tokyoIngenia04_space-other_T2star_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-tokyoIngenia05/anat/sub-tokyoIngenia05_space-other_T1w_label-discs_dlabel.json b/derivatives/labels/sub-tokyoIngenia05/anat/sub-tokyoIngenia05_T1w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-tokyoIngenia05/anat/sub-tokyoIngenia05_space-other_T1w_label-discs_dlabel.json rename to derivatives/labels/sub-tokyoIngenia05/anat/sub-tokyoIngenia05_T1w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-tokyoIngenia05/anat/sub-tokyoIngenia05_space-other_T1w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-tokyoIngenia05/anat/sub-tokyoIngenia05_T1w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-tokyoIngenia05/anat/sub-tokyoIngenia05_space-other_T1w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-tokyoIngenia05/anat/sub-tokyoIngenia05_T1w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-tokyoIngenia05/anat/sub-tokyoIngenia05_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-tokyoIngenia05/anat/sub-tokyoIngenia05_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-tokyoIngenia05/anat/sub-tokyoIngenia05_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-tokyoIngenia05/anat/sub-tokyoIngenia05_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-tokyoIngenia05/anat/sub-tokyoIngenia05_T2star_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-tokyoIngenia05/anat/sub-tokyoIngenia05_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-tokyoIngenia05/anat/sub-tokyoIngenia05_T2star_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-tokyoIngenia05/anat/sub-tokyoIngenia05_space-other_T2w_label-discs_dlabel.json b/derivatives/labels/sub-tokyoIngenia05/anat/sub-tokyoIngenia05_T2w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-tokyoIngenia05/anat/sub-tokyoIngenia05_space-other_T2w_label-discs_dlabel.json rename to derivatives/labels/sub-tokyoIngenia05/anat/sub-tokyoIngenia05_T2w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-tokyoIngenia05/anat/sub-tokyoIngenia05_space-other_T2w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-tokyoIngenia05/anat/sub-tokyoIngenia05_T2w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-tokyoIngenia05/anat/sub-tokyoIngenia05_space-other_T2w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-tokyoIngenia05/anat/sub-tokyoIngenia05_T2w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-tokyoIngenia05/anat/sub-tokyoIngenia05_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-tokyoIngenia05/anat/sub-tokyoIngenia05_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-tokyoIngenia05/anat/sub-tokyoIngenia05_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-tokyoIngenia05/anat/sub-tokyoIngenia05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-tokyoIngenia05/anat/sub-tokyoIngenia05_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-tokyoIngenia05/anat/sub-tokyoIngenia05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-tokyoIngenia05/anat/sub-tokyoIngenia05_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-tokyoIngenia05/anat/sub-tokyoIngenia05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-tokyoIngenia05/anat/sub-tokyoIngenia05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-tokyoIngenia05/anat/sub-tokyoIngenia05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-tokyoIngenia05/anat/sub-tokyoIngenia05_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-tokyoIngenia05/anat/sub-tokyoIngenia05_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-tokyoIngenia05/anat/sub-tokyoIngenia05_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-tokyoIngenia05/anat/sub-tokyoIngenia05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-tokyoIngenia05/anat/sub-tokyoIngenia05_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-tokyoIngenia05/anat/sub-tokyoIngenia05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-tokyoIngenia05/anat/sub-tokyoIngenia05_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-tokyoIngenia05/anat/sub-tokyoIngenia05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-tokyoIngenia05/anat/sub-tokyoIngenia05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-tokyoIngenia05/anat/sub-tokyoIngenia05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-tokyoIngenia05/anat/sub-tokyoIngenia05_space-other_T2star_label-SC_seg.nii.gz b/derivatives/labels/sub-tokyoIngenia05/anat/sub-tokyoIngenia05_space-other_T2star_label-SC_seg.nii.gz index 41d1ebbaab..16a32d9354 100644 --- a/derivatives/labels/sub-tokyoIngenia05/anat/sub-tokyoIngenia05_space-other_T2star_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-tokyoIngenia05/anat/sub-tokyoIngenia05_space-other_T2star_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s3869--6a3d8e69a53baf51deda27e5278754e00924a636c223217aecd04cf51d452a87.nii.gz +/annex/objects/SHA256E-s15296--89e6d3f9bbb3306c83a9fa48dd5fa6474883b64fae5f6b40445f72ba7d8a7a6f.nii.gz diff --git a/derivatives/labels/sub-tokyoIngenia05/anat/sub-tokyoIngenia05_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-tokyoIngenia05/anat/sub-tokyoIngenia05_space-other_T2star_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-tokyoIngenia05/anat/sub-tokyoIngenia05_space-other_T2star_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-tokyoIngenia05/anat/sub-tokyoIngenia05_space-other_T2w_csflabel-SC_seg.json b/derivatives/labels/sub-tokyoIngenia05/anat/sub-tokyoIngenia05_space-other_T2w_label-CSF_seg.json similarity index 100% rename from derivatives/labels/sub-tokyoIngenia05/anat/sub-tokyoIngenia05_space-other_T2w_csflabel-SC_seg.json rename to derivatives/labels/sub-tokyoIngenia05/anat/sub-tokyoIngenia05_space-other_T2w_label-CSF_seg.json diff --git a/derivatives/labels/sub-tokyoIngenia05/anat/sub-tokyoIngenia05_space-other_T2w_csflabel-SC_seg.nii.gz b/derivatives/labels/sub-tokyoIngenia05/anat/sub-tokyoIngenia05_space-other_T2w_label-CSF_seg.nii.gz similarity index 100% rename from derivatives/labels/sub-tokyoIngenia05/anat/sub-tokyoIngenia05_space-other_T2w_csflabel-SC_seg.nii.gz rename to derivatives/labels/sub-tokyoIngenia05/anat/sub-tokyoIngenia05_space-other_T2w_label-CSF_seg.nii.gz diff --git a/derivatives/labels/sub-tokyoIngenia05/anat/sub-tokyoIngenia05_space-other_T2w_label-canal_seg.json b/derivatives/labels/sub-tokyoIngenia05/anat/sub-tokyoIngenia05_space-other_T2w_label-canal_seg.json new file mode 100644 index 0000000000..9b765ae333 --- /dev/null +++ b/derivatives/labels/sub-tokyoIngenia05/anat/sub-tokyoIngenia05_space-other_T2w_label-canal_seg.json @@ -0,0 +1,11 @@ +{ + "SpatialReference": { + "Orientation": "RPI", + "Resampling": "0.8x0.8x0.8" + }, + "GeneratedBy": [ + { + "Description": "Created from label-CSF_seg" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-tokyoIngenia05/anat/sub-tokyoIngenia05_space-other_T2w_label-canal_seg.nii.gz b/derivatives/labels/sub-tokyoIngenia05/anat/sub-tokyoIngenia05_space-other_T2w_label-canal_seg.nii.gz new file mode 100644 index 0000000000..fc14b4c27d --- /dev/null +++ b/derivatives/labels/sub-tokyoIngenia05/anat/sub-tokyoIngenia05_space-other_T2w_label-canal_seg.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s131376--85372bbd65bd8920bffe7a1617301be5c60f5fed1ef0c6e11404ffe0780304ac.nii.gz diff --git a/derivatives/labels/sub-tokyoIngenia06/anat/sub-tokyoIngenia06_space-other_T1w_label-discs_dlabel.json b/derivatives/labels/sub-tokyoIngenia06/anat/sub-tokyoIngenia06_T1w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-tokyoIngenia06/anat/sub-tokyoIngenia06_space-other_T1w_label-discs_dlabel.json rename to derivatives/labels/sub-tokyoIngenia06/anat/sub-tokyoIngenia06_T1w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-tokyoIngenia06/anat/sub-tokyoIngenia06_space-other_T1w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-tokyoIngenia06/anat/sub-tokyoIngenia06_T1w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-tokyoIngenia06/anat/sub-tokyoIngenia06_space-other_T1w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-tokyoIngenia06/anat/sub-tokyoIngenia06_T1w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-tokyoIngenia06/anat/sub-tokyoIngenia06_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-tokyoIngenia06/anat/sub-tokyoIngenia06_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-tokyoIngenia06/anat/sub-tokyoIngenia06_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-tokyoIngenia06/anat/sub-tokyoIngenia06_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-tokyoIngenia06/anat/sub-tokyoIngenia06_T2star_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-tokyoIngenia06/anat/sub-tokyoIngenia06_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-tokyoIngenia06/anat/sub-tokyoIngenia06_T2star_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-tokyoIngenia06/anat/sub-tokyoIngenia06_space-other_T2w_label-discs_dlabel.json b/derivatives/labels/sub-tokyoIngenia06/anat/sub-tokyoIngenia06_T2w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-tokyoIngenia06/anat/sub-tokyoIngenia06_space-other_T2w_label-discs_dlabel.json rename to derivatives/labels/sub-tokyoIngenia06/anat/sub-tokyoIngenia06_T2w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-tokyoIngenia06/anat/sub-tokyoIngenia06_space-other_T2w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-tokyoIngenia06/anat/sub-tokyoIngenia06_T2w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-tokyoIngenia06/anat/sub-tokyoIngenia06_space-other_T2w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-tokyoIngenia06/anat/sub-tokyoIngenia06_T2w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-tokyoIngenia06/anat/sub-tokyoIngenia06_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-tokyoIngenia06/anat/sub-tokyoIngenia06_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-tokyoIngenia06/anat/sub-tokyoIngenia06_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-tokyoIngenia06/anat/sub-tokyoIngenia06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-tokyoIngenia06/anat/sub-tokyoIngenia06_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-tokyoIngenia06/anat/sub-tokyoIngenia06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-tokyoIngenia06/anat/sub-tokyoIngenia06_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-tokyoIngenia06/anat/sub-tokyoIngenia06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-tokyoIngenia06/anat/sub-tokyoIngenia06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-tokyoIngenia06/anat/sub-tokyoIngenia06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-tokyoIngenia06/anat/sub-tokyoIngenia06_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-tokyoIngenia06/anat/sub-tokyoIngenia06_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-tokyoIngenia06/anat/sub-tokyoIngenia06_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-tokyoIngenia06/anat/sub-tokyoIngenia06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-tokyoIngenia06/anat/sub-tokyoIngenia06_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-tokyoIngenia06/anat/sub-tokyoIngenia06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-tokyoIngenia06/anat/sub-tokyoIngenia06_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-tokyoIngenia06/anat/sub-tokyoIngenia06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-tokyoIngenia06/anat/sub-tokyoIngenia06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-tokyoIngenia06/anat/sub-tokyoIngenia06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-tokyoIngenia06/anat/sub-tokyoIngenia06_space-other_T2star_label-SC_seg.nii.gz b/derivatives/labels/sub-tokyoIngenia06/anat/sub-tokyoIngenia06_space-other_T2star_label-SC_seg.nii.gz index 6f0cfc51de..8ee86bb797 100644 --- a/derivatives/labels/sub-tokyoIngenia06/anat/sub-tokyoIngenia06_space-other_T2star_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-tokyoIngenia06/anat/sub-tokyoIngenia06_space-other_T2star_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s8173--004ccafd19ed81c21912fc77d222127dcf595087a731b494c068424947442c03.nii.gz +/annex/objects/SHA256E-s8194--41f9c8e13dbd9bee82299df816a8680346a5f241429a89235fda97058f375f6d.nii.gz diff --git a/derivatives/labels/sub-tokyoIngenia06/anat/sub-tokyoIngenia06_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-tokyoIngenia06/anat/sub-tokyoIngenia06_space-other_T2star_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-tokyoIngenia06/anat/sub-tokyoIngenia06_space-other_T2star_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-tokyoIngenia06/anat/sub-tokyoIngenia06_space-other_T2w_csflabel-SC_seg.json b/derivatives/labels/sub-tokyoIngenia06/anat/sub-tokyoIngenia06_space-other_T2w_label-CSF_seg.json similarity index 100% rename from derivatives/labels/sub-tokyoIngenia06/anat/sub-tokyoIngenia06_space-other_T2w_csflabel-SC_seg.json rename to derivatives/labels/sub-tokyoIngenia06/anat/sub-tokyoIngenia06_space-other_T2w_label-CSF_seg.json diff --git a/derivatives/labels/sub-tokyoIngenia06/anat/sub-tokyoIngenia06_space-other_T2w_csflabel-SC_seg.nii.gz b/derivatives/labels/sub-tokyoIngenia06/anat/sub-tokyoIngenia06_space-other_T2w_label-CSF_seg.nii.gz similarity index 100% rename from derivatives/labels/sub-tokyoIngenia06/anat/sub-tokyoIngenia06_space-other_T2w_csflabel-SC_seg.nii.gz rename to derivatives/labels/sub-tokyoIngenia06/anat/sub-tokyoIngenia06_space-other_T2w_label-CSF_seg.nii.gz diff --git a/derivatives/labels/sub-tokyoIngenia06/anat/sub-tokyoIngenia06_space-other_T2w_label-canal_seg.json b/derivatives/labels/sub-tokyoIngenia06/anat/sub-tokyoIngenia06_space-other_T2w_label-canal_seg.json new file mode 100644 index 0000000000..9b765ae333 --- /dev/null +++ b/derivatives/labels/sub-tokyoIngenia06/anat/sub-tokyoIngenia06_space-other_T2w_label-canal_seg.json @@ -0,0 +1,11 @@ +{ + "SpatialReference": { + "Orientation": "RPI", + "Resampling": "0.8x0.8x0.8" + }, + "GeneratedBy": [ + { + "Description": "Created from label-CSF_seg" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-tokyoIngenia06/anat/sub-tokyoIngenia06_space-other_T2w_label-canal_seg.nii.gz b/derivatives/labels/sub-tokyoIngenia06/anat/sub-tokyoIngenia06_space-other_T2w_label-canal_seg.nii.gz new file mode 100644 index 0000000000..76a2402a8b --- /dev/null +++ b/derivatives/labels/sub-tokyoIngenia06/anat/sub-tokyoIngenia06_space-other_T2w_label-canal_seg.nii.gz @@ -0,0 +1 @@ +/annex/objects/SHA256E-s134384--a6471e5d9756ece936ba919d3ded6c407e9582f90569fc2d616ed6f2705aa06c.nii.gz diff --git a/derivatives/labels/sub-tokyoIngenia07/anat/sub-tokyoIngenia07_space-other_T1w_label-discs_dlabel.json b/derivatives/labels/sub-tokyoIngenia07/anat/sub-tokyoIngenia07_T1w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-tokyoIngenia07/anat/sub-tokyoIngenia07_space-other_T1w_label-discs_dlabel.json rename to derivatives/labels/sub-tokyoIngenia07/anat/sub-tokyoIngenia07_T1w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-tokyoIngenia07/anat/sub-tokyoIngenia07_space-other_T1w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-tokyoIngenia07/anat/sub-tokyoIngenia07_T1w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-tokyoIngenia07/anat/sub-tokyoIngenia07_space-other_T1w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-tokyoIngenia07/anat/sub-tokyoIngenia07_T1w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-tokyoIngenia07/anat/sub-tokyoIngenia07_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-tokyoIngenia07/anat/sub-tokyoIngenia07_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-tokyoIngenia07/anat/sub-tokyoIngenia07_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-tokyoIngenia07/anat/sub-tokyoIngenia07_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-tokyoIngenia07/anat/sub-tokyoIngenia07_T2star_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-tokyoIngenia07/anat/sub-tokyoIngenia07_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-tokyoIngenia07/anat/sub-tokyoIngenia07_T2star_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-tokyoIngenia07/anat/sub-tokyoIngenia07_space-other_T2w_label-discs_dlabel.json b/derivatives/labels/sub-tokyoIngenia07/anat/sub-tokyoIngenia07_T2w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-tokyoIngenia07/anat/sub-tokyoIngenia07_space-other_T2w_label-discs_dlabel.json rename to derivatives/labels/sub-tokyoIngenia07/anat/sub-tokyoIngenia07_T2w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-tokyoIngenia07/anat/sub-tokyoIngenia07_space-other_T2w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-tokyoIngenia07/anat/sub-tokyoIngenia07_T2w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-tokyoIngenia07/anat/sub-tokyoIngenia07_space-other_T2w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-tokyoIngenia07/anat/sub-tokyoIngenia07_T2w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-tokyoIngenia07/anat/sub-tokyoIngenia07_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-tokyoIngenia07/anat/sub-tokyoIngenia07_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-tokyoIngenia07/anat/sub-tokyoIngenia07_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-tokyoIngenia07/anat/sub-tokyoIngenia07_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-tokyoIngenia07/anat/sub-tokyoIngenia07_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-tokyoIngenia07/anat/sub-tokyoIngenia07_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-tokyoIngenia07/anat/sub-tokyoIngenia07_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-tokyoIngenia07/anat/sub-tokyoIngenia07_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-tokyoIngenia07/anat/sub-tokyoIngenia07_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-tokyoIngenia07/anat/sub-tokyoIngenia07_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-tokyoIngenia07/anat/sub-tokyoIngenia07_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-tokyoIngenia07/anat/sub-tokyoIngenia07_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-tokyoIngenia07/anat/sub-tokyoIngenia07_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-tokyoIngenia07/anat/sub-tokyoIngenia07_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-tokyoIngenia07/anat/sub-tokyoIngenia07_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-tokyoIngenia07/anat/sub-tokyoIngenia07_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-tokyoIngenia07/anat/sub-tokyoIngenia07_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-tokyoIngenia07/anat/sub-tokyoIngenia07_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-tokyoIngenia07/anat/sub-tokyoIngenia07_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-tokyoIngenia07/anat/sub-tokyoIngenia07_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-tokyoIngenia07/anat/sub-tokyoIngenia07_space-other_T2star_label-SC_seg.nii.gz b/derivatives/labels/sub-tokyoIngenia07/anat/sub-tokyoIngenia07_space-other_T2star_label-SC_seg.nii.gz index 2482119fc6..c223c8387d 100644 --- a/derivatives/labels/sub-tokyoIngenia07/anat/sub-tokyoIngenia07_space-other_T2star_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-tokyoIngenia07/anat/sub-tokyoIngenia07_space-other_T2star_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s8132--8e5a74a8e18d30418e68be27cbf90dbd7ce57699bd960b8b42bb5e5594816e8e.nii.gz +/annex/objects/SHA256E-s8153--4074e30bcaaa1269681845f6e7179ac007453d1767949694bc62989644f98076.nii.gz diff --git a/derivatives/labels/sub-tokyoIngenia07/anat/sub-tokyoIngenia07_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-tokyoIngenia07/anat/sub-tokyoIngenia07_space-other_T2star_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-tokyoIngenia07/anat/sub-tokyoIngenia07_space-other_T2star_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-tokyoSkyra01/anat/sub-tokyoSkyra01_space-other_T1w_label-discs_dlabel.json b/derivatives/labels/sub-tokyoSkyra01/anat/sub-tokyoSkyra01_T1w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-tokyoSkyra01/anat/sub-tokyoSkyra01_space-other_T1w_label-discs_dlabel.json rename to derivatives/labels/sub-tokyoSkyra01/anat/sub-tokyoSkyra01_T1w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-tokyoSkyra01/anat/sub-tokyoSkyra01_space-other_T1w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-tokyoSkyra01/anat/sub-tokyoSkyra01_T1w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-tokyoSkyra01/anat/sub-tokyoSkyra01_space-other_T1w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-tokyoSkyra01/anat/sub-tokyoSkyra01_T1w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-tokyoSkyra01/anat/sub-tokyoSkyra01_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-tokyoSkyra01/anat/sub-tokyoSkyra01_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-tokyoSkyra01/anat/sub-tokyoSkyra01_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-tokyoSkyra01/anat/sub-tokyoSkyra01_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-tokyoSkyra01/anat/sub-tokyoSkyra01_T2star_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-tokyoSkyra01/anat/sub-tokyoSkyra01_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-tokyoSkyra01/anat/sub-tokyoSkyra01_T2star_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-tokyoSkyra01/anat/sub-tokyoSkyra01_space-other_T2w_label-discs_dlabel.json b/derivatives/labels/sub-tokyoSkyra01/anat/sub-tokyoSkyra01_T2w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-tokyoSkyra01/anat/sub-tokyoSkyra01_space-other_T2w_label-discs_dlabel.json rename to derivatives/labels/sub-tokyoSkyra01/anat/sub-tokyoSkyra01_T2w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-tokyoSkyra01/anat/sub-tokyoSkyra01_space-other_T2w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-tokyoSkyra01/anat/sub-tokyoSkyra01_T2w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-tokyoSkyra01/anat/sub-tokyoSkyra01_space-other_T2w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-tokyoSkyra01/anat/sub-tokyoSkyra01_T2w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-tokyoSkyra01/anat/sub-tokyoSkyra01_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-tokyoSkyra01/anat/sub-tokyoSkyra01_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-tokyoSkyra01/anat/sub-tokyoSkyra01_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-tokyoSkyra01/anat/sub-tokyoSkyra01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-tokyoSkyra01/anat/sub-tokyoSkyra01_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-tokyoSkyra01/anat/sub-tokyoSkyra01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-tokyoSkyra01/anat/sub-tokyoSkyra01_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-tokyoSkyra01/anat/sub-tokyoSkyra01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-tokyoSkyra01/anat/sub-tokyoSkyra01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-tokyoSkyra01/anat/sub-tokyoSkyra01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-tokyoSkyra01/anat/sub-tokyoSkyra01_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-tokyoSkyra01/anat/sub-tokyoSkyra01_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-tokyoSkyra01/anat/sub-tokyoSkyra01_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-tokyoSkyra01/anat/sub-tokyoSkyra01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-tokyoSkyra01/anat/sub-tokyoSkyra01_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-tokyoSkyra01/anat/sub-tokyoSkyra01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-tokyoSkyra01/anat/sub-tokyoSkyra01_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-tokyoSkyra01/anat/sub-tokyoSkyra01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-tokyoSkyra01/anat/sub-tokyoSkyra01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-tokyoSkyra01/anat/sub-tokyoSkyra01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-tokyoSkyra01/anat/sub-tokyoSkyra01_space-other_T2star_label-SC_seg.nii.gz b/derivatives/labels/sub-tokyoSkyra01/anat/sub-tokyoSkyra01_space-other_T2star_label-SC_seg.nii.gz index 385db8aae1..9bb32a9d61 100644 --- a/derivatives/labels/sub-tokyoSkyra01/anat/sub-tokyoSkyra01_space-other_T2star_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-tokyoSkyra01/anat/sub-tokyoSkyra01_space-other_T2star_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s14924--8afb9d9e7fa157342c3157c6bea11a9194f34d21624d0d760d0cd8bca0e89432.nii.gz +/annex/objects/SHA256E-s14945--b548e313ba582665912eeb2a6e8ced5988cc5c020e744242cd63f146c42ec06e.nii.gz diff --git a/derivatives/labels/sub-tokyoSkyra01/anat/sub-tokyoSkyra01_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-tokyoSkyra01/anat/sub-tokyoSkyra01_space-other_T2star_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-tokyoSkyra01/anat/sub-tokyoSkyra01_space-other_T2star_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-tokyoSkyra02/anat/sub-tokyoSkyra02_space-other_T1w_label-discs_dlabel.json b/derivatives/labels/sub-tokyoSkyra02/anat/sub-tokyoSkyra02_T1w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-tokyoSkyra02/anat/sub-tokyoSkyra02_space-other_T1w_label-discs_dlabel.json rename to derivatives/labels/sub-tokyoSkyra02/anat/sub-tokyoSkyra02_T1w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-tokyoSkyra02/anat/sub-tokyoSkyra02_space-other_T1w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-tokyoSkyra02/anat/sub-tokyoSkyra02_T1w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-tokyoSkyra02/anat/sub-tokyoSkyra02_space-other_T1w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-tokyoSkyra02/anat/sub-tokyoSkyra02_T1w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-tokyoSkyra02/anat/sub-tokyoSkyra02_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-tokyoSkyra02/anat/sub-tokyoSkyra02_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-tokyoSkyra02/anat/sub-tokyoSkyra02_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-tokyoSkyra02/anat/sub-tokyoSkyra02_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-tokyoSkyra02/anat/sub-tokyoSkyra02_T2star_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-tokyoSkyra02/anat/sub-tokyoSkyra02_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-tokyoSkyra02/anat/sub-tokyoSkyra02_T2star_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-tokyoSkyra02/anat/sub-tokyoSkyra02_space-other_T2w_label-discs_dlabel.json b/derivatives/labels/sub-tokyoSkyra02/anat/sub-tokyoSkyra02_T2w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-tokyoSkyra02/anat/sub-tokyoSkyra02_space-other_T2w_label-discs_dlabel.json rename to derivatives/labels/sub-tokyoSkyra02/anat/sub-tokyoSkyra02_T2w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-tokyoSkyra02/anat/sub-tokyoSkyra02_space-other_T2w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-tokyoSkyra02/anat/sub-tokyoSkyra02_T2w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-tokyoSkyra02/anat/sub-tokyoSkyra02_space-other_T2w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-tokyoSkyra02/anat/sub-tokyoSkyra02_T2w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-tokyoSkyra02/anat/sub-tokyoSkyra02_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-tokyoSkyra02/anat/sub-tokyoSkyra02_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-tokyoSkyra02/anat/sub-tokyoSkyra02_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-tokyoSkyra02/anat/sub-tokyoSkyra02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-tokyoSkyra02/anat/sub-tokyoSkyra02_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-tokyoSkyra02/anat/sub-tokyoSkyra02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-tokyoSkyra02/anat/sub-tokyoSkyra02_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-tokyoSkyra02/anat/sub-tokyoSkyra02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-tokyoSkyra02/anat/sub-tokyoSkyra02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-tokyoSkyra02/anat/sub-tokyoSkyra02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-tokyoSkyra02/anat/sub-tokyoSkyra02_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-tokyoSkyra02/anat/sub-tokyoSkyra02_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-tokyoSkyra02/anat/sub-tokyoSkyra02_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-tokyoSkyra02/anat/sub-tokyoSkyra02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-tokyoSkyra02/anat/sub-tokyoSkyra02_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-tokyoSkyra02/anat/sub-tokyoSkyra02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-tokyoSkyra02/anat/sub-tokyoSkyra02_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-tokyoSkyra02/anat/sub-tokyoSkyra02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-tokyoSkyra02/anat/sub-tokyoSkyra02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-tokyoSkyra02/anat/sub-tokyoSkyra02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-tokyoSkyra02/anat/sub-tokyoSkyra02_space-other_T2star_label-SC_seg.nii.gz b/derivatives/labels/sub-tokyoSkyra02/anat/sub-tokyoSkyra02_space-other_T2star_label-SC_seg.nii.gz index 62e1b96a30..144b53c4c8 100644 --- a/derivatives/labels/sub-tokyoSkyra02/anat/sub-tokyoSkyra02_space-other_T2star_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-tokyoSkyra02/anat/sub-tokyoSkyra02_space-other_T2star_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s14738--81513e072db9d1f4e8a4ee6fced74dba8323ab47721aeca2c383cca9df2ed69b.nii.gz +/annex/objects/SHA256E-s14759--16670e5da72b90b1719ef5f8ea0375898a0cd25783c63df9f7b89f4370d63e55.nii.gz diff --git a/derivatives/labels/sub-tokyoSkyra02/anat/sub-tokyoSkyra02_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-tokyoSkyra02/anat/sub-tokyoSkyra02_space-other_T2star_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-tokyoSkyra02/anat/sub-tokyoSkyra02_space-other_T2star_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-tokyoSkyra03/anat/sub-tokyoSkyra03_space-other_T1w_label-discs_dlabel.json b/derivatives/labels/sub-tokyoSkyra03/anat/sub-tokyoSkyra03_T1w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-tokyoSkyra03/anat/sub-tokyoSkyra03_space-other_T1w_label-discs_dlabel.json rename to derivatives/labels/sub-tokyoSkyra03/anat/sub-tokyoSkyra03_T1w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-tokyoSkyra03/anat/sub-tokyoSkyra03_space-other_T1w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-tokyoSkyra03/anat/sub-tokyoSkyra03_T1w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-tokyoSkyra03/anat/sub-tokyoSkyra03_space-other_T1w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-tokyoSkyra03/anat/sub-tokyoSkyra03_T1w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-tokyoSkyra03/anat/sub-tokyoSkyra03_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-tokyoSkyra03/anat/sub-tokyoSkyra03_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-tokyoSkyra03/anat/sub-tokyoSkyra03_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-tokyoSkyra03/anat/sub-tokyoSkyra03_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-tokyoSkyra03/anat/sub-tokyoSkyra03_T2star_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-tokyoSkyra03/anat/sub-tokyoSkyra03_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-tokyoSkyra03/anat/sub-tokyoSkyra03_T2star_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-tokyoSkyra03/anat/sub-tokyoSkyra03_space-other_T2w_label-discs_dlabel.json b/derivatives/labels/sub-tokyoSkyra03/anat/sub-tokyoSkyra03_T2w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-tokyoSkyra03/anat/sub-tokyoSkyra03_space-other_T2w_label-discs_dlabel.json rename to derivatives/labels/sub-tokyoSkyra03/anat/sub-tokyoSkyra03_T2w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-tokyoSkyra03/anat/sub-tokyoSkyra03_space-other_T2w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-tokyoSkyra03/anat/sub-tokyoSkyra03_T2w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-tokyoSkyra03/anat/sub-tokyoSkyra03_space-other_T2w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-tokyoSkyra03/anat/sub-tokyoSkyra03_T2w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-tokyoSkyra03/anat/sub-tokyoSkyra03_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-tokyoSkyra03/anat/sub-tokyoSkyra03_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-tokyoSkyra03/anat/sub-tokyoSkyra03_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-tokyoSkyra03/anat/sub-tokyoSkyra03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-tokyoSkyra03/anat/sub-tokyoSkyra03_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-tokyoSkyra03/anat/sub-tokyoSkyra03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-tokyoSkyra03/anat/sub-tokyoSkyra03_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-tokyoSkyra03/anat/sub-tokyoSkyra03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-tokyoSkyra03/anat/sub-tokyoSkyra03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-tokyoSkyra03/anat/sub-tokyoSkyra03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-tokyoSkyra03/anat/sub-tokyoSkyra03_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-tokyoSkyra03/anat/sub-tokyoSkyra03_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-tokyoSkyra03/anat/sub-tokyoSkyra03_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-tokyoSkyra03/anat/sub-tokyoSkyra03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-tokyoSkyra03/anat/sub-tokyoSkyra03_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-tokyoSkyra03/anat/sub-tokyoSkyra03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-tokyoSkyra03/anat/sub-tokyoSkyra03_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-tokyoSkyra03/anat/sub-tokyoSkyra03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-tokyoSkyra03/anat/sub-tokyoSkyra03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-tokyoSkyra03/anat/sub-tokyoSkyra03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-tokyoSkyra03/anat/sub-tokyoSkyra03_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.json b/derivatives/labels/sub-tokyoSkyra03/anat/sub-tokyoSkyra03_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.json new file mode 100644 index 0000000000..e537a137e5 --- /dev/null +++ b/derivatives/labels/sub-tokyoSkyra03/anat/sub-tokyoSkyra03_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.json @@ -0,0 +1,11 @@ +{ + "SpatialReference": { + "Orientation": "RPI", + "Resampling": "1x1x1" + }, + "GeneratedBy": [ + { + "Description": "Manual label of C2 and C5 mid-vertebrae, at the center of the spinal cord." + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-tokyoSkyra03/anat/sub-tokyoSkyra03_space-other_T1w_RPI_r_labels-manual.nii.gz b/derivatives/labels/sub-tokyoSkyra03/anat/sub-tokyoSkyra03_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-tokyoSkyra03/anat/sub-tokyoSkyra03_space-other_T1w_RPI_r_labels-manual.nii.gz rename to derivatives/labels/sub-tokyoSkyra03/anat/sub-tokyoSkyra03_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.nii.gz diff --git a/derivatives/labels/sub-tokyoSkyra03/anat/sub-tokyoSkyra03_space-other_T2star_gmlabel-SC_seg.nii.gz b/derivatives/labels/sub-tokyoSkyra03/anat/sub-tokyoSkyra03_space-other_T2star_gmlabel-SC_seg.nii.gz index 552a91eda6..1fd63ec3a8 100644 --- a/derivatives/labels/sub-tokyoSkyra03/anat/sub-tokyoSkyra03_space-other_T2star_gmlabel-SC_seg.nii.gz +++ b/derivatives/labels/sub-tokyoSkyra03/anat/sub-tokyoSkyra03_space-other_T2star_gmlabel-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s107102--1588ebe5c110cb0e37b13b223c940e56a613ffbe2f37cdd22c44a4aeb251dfbf.nii.gz +/annex/objects/SHA256E-s107124--54dbb9675cf9d0064a5d39322eec995a0b29be6e11f444b13f24092851903cd3.nii.gz diff --git a/derivatives/labels/sub-tokyoSkyra03/anat/sub-tokyoSkyra03_space-other_T2star_label-SC_seg.nii.gz b/derivatives/labels/sub-tokyoSkyra03/anat/sub-tokyoSkyra03_space-other_T2star_label-SC_seg.nii.gz index 32de92a927..780c6dff1c 100644 --- a/derivatives/labels/sub-tokyoSkyra03/anat/sub-tokyoSkyra03_space-other_T2star_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-tokyoSkyra03/anat/sub-tokyoSkyra03_space-other_T2star_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s14824--c976cee265bf4ca421e35e030a4634574d2472df0cdea0dc25150c588bb2cb7e.nii.gz +/annex/objects/SHA256E-s14845--78c76d01d6f99e4726669ce41ee156d33fc01d0189f4d83cf9157442824d47e6.nii.gz diff --git a/derivatives/labels/sub-tokyoSkyra03/anat/sub-tokyoSkyra03_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-tokyoSkyra03/anat/sub-tokyoSkyra03_space-other_T2star_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-tokyoSkyra03/anat/sub-tokyoSkyra03_space-other_T2star_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-tokyoSkyra04/anat/sub-tokyoSkyra04_space-other_T1w_label-discs_dlabel.json b/derivatives/labels/sub-tokyoSkyra04/anat/sub-tokyoSkyra04_T1w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-tokyoSkyra04/anat/sub-tokyoSkyra04_space-other_T1w_label-discs_dlabel.json rename to derivatives/labels/sub-tokyoSkyra04/anat/sub-tokyoSkyra04_T1w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-tokyoSkyra04/anat/sub-tokyoSkyra04_space-other_T1w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-tokyoSkyra04/anat/sub-tokyoSkyra04_T1w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-tokyoSkyra04/anat/sub-tokyoSkyra04_space-other_T1w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-tokyoSkyra04/anat/sub-tokyoSkyra04_T1w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-tokyoSkyra04/anat/sub-tokyoSkyra04_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-tokyoSkyra04/anat/sub-tokyoSkyra04_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-tokyoSkyra04/anat/sub-tokyoSkyra04_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-tokyoSkyra04/anat/sub-tokyoSkyra04_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-tokyoSkyra04/anat/sub-tokyoSkyra04_T2star_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-tokyoSkyra04/anat/sub-tokyoSkyra04_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-tokyoSkyra04/anat/sub-tokyoSkyra04_T2star_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-tokyoSkyra04/anat/sub-tokyoSkyra04_space-other_T2w_label-discs_dlabel.json b/derivatives/labels/sub-tokyoSkyra04/anat/sub-tokyoSkyra04_T2w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-tokyoSkyra04/anat/sub-tokyoSkyra04_space-other_T2w_label-discs_dlabel.json rename to derivatives/labels/sub-tokyoSkyra04/anat/sub-tokyoSkyra04_T2w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-tokyoSkyra04/anat/sub-tokyoSkyra04_space-other_T2w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-tokyoSkyra04/anat/sub-tokyoSkyra04_T2w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-tokyoSkyra04/anat/sub-tokyoSkyra04_space-other_T2w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-tokyoSkyra04/anat/sub-tokyoSkyra04_T2w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-tokyoSkyra04/anat/sub-tokyoSkyra04_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-tokyoSkyra04/anat/sub-tokyoSkyra04_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-tokyoSkyra04/anat/sub-tokyoSkyra04_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-tokyoSkyra04/anat/sub-tokyoSkyra04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-tokyoSkyra04/anat/sub-tokyoSkyra04_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-tokyoSkyra04/anat/sub-tokyoSkyra04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-tokyoSkyra04/anat/sub-tokyoSkyra04_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-tokyoSkyra04/anat/sub-tokyoSkyra04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-tokyoSkyra04/anat/sub-tokyoSkyra04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-tokyoSkyra04/anat/sub-tokyoSkyra04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-tokyoSkyra04/anat/sub-tokyoSkyra04_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-tokyoSkyra04/anat/sub-tokyoSkyra04_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-tokyoSkyra04/anat/sub-tokyoSkyra04_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-tokyoSkyra04/anat/sub-tokyoSkyra04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-tokyoSkyra04/anat/sub-tokyoSkyra04_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-tokyoSkyra04/anat/sub-tokyoSkyra04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-tokyoSkyra04/anat/sub-tokyoSkyra04_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-tokyoSkyra04/anat/sub-tokyoSkyra04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-tokyoSkyra04/anat/sub-tokyoSkyra04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-tokyoSkyra04/anat/sub-tokyoSkyra04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-tokyoSkyra04/anat/sub-tokyoSkyra04_space-other_T2star_gmlabel-SC_seg.nii.gz b/derivatives/labels/sub-tokyoSkyra04/anat/sub-tokyoSkyra04_space-other_T2star_gmlabel-SC_seg.nii.gz index 22e8f3f5be..c72c1bafc1 100644 --- a/derivatives/labels/sub-tokyoSkyra04/anat/sub-tokyoSkyra04_space-other_T2star_gmlabel-SC_seg.nii.gz +++ b/derivatives/labels/sub-tokyoSkyra04/anat/sub-tokyoSkyra04_space-other_T2star_gmlabel-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s106970--80aa3e9b0d5323aea1ade659cfab895c63a69aa8015fd20d565899bdd9982f44.nii.gz +/annex/objects/SHA256E-s106980--e1713867d6a8597ac1a8079b617d452c15db1cdf4c21da36b544b4efd3e3e0fe.nii.gz diff --git a/derivatives/labels/sub-tokyoSkyra04/anat/sub-tokyoSkyra04_space-other_T2star_label-SC_seg.nii.gz b/derivatives/labels/sub-tokyoSkyra04/anat/sub-tokyoSkyra04_space-other_T2star_label-SC_seg.nii.gz index 76c53743dc..b5f172417d 100644 --- a/derivatives/labels/sub-tokyoSkyra04/anat/sub-tokyoSkyra04_space-other_T2star_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-tokyoSkyra04/anat/sub-tokyoSkyra04_space-other_T2star_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s14672--a327a3f3aa4a9708ece9ac7eaf1649e51beb86b45c9181555daa211e28de9ce2.nii.gz +/annex/objects/SHA256E-s14693--a1d167dd69f70ded793b5ee21ebc21e3f41ad8e8a2957d5f0627b9d51593df30.nii.gz diff --git a/derivatives/labels/sub-tokyoSkyra04/anat/sub-tokyoSkyra04_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-tokyoSkyra04/anat/sub-tokyoSkyra04_space-other_T2star_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-tokyoSkyra04/anat/sub-tokyoSkyra04_space-other_T2star_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-tokyoSkyra05/anat/sub-tokyoSkyra05_space-other_T1w_label-discs_dlabel.json b/derivatives/labels/sub-tokyoSkyra05/anat/sub-tokyoSkyra05_T1w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-tokyoSkyra05/anat/sub-tokyoSkyra05_space-other_T1w_label-discs_dlabel.json rename to derivatives/labels/sub-tokyoSkyra05/anat/sub-tokyoSkyra05_T1w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-tokyoSkyra05/anat/sub-tokyoSkyra05_space-other_T1w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-tokyoSkyra05/anat/sub-tokyoSkyra05_T1w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-tokyoSkyra05/anat/sub-tokyoSkyra05_space-other_T1w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-tokyoSkyra05/anat/sub-tokyoSkyra05_T1w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-tokyoSkyra05/anat/sub-tokyoSkyra05_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-tokyoSkyra05/anat/sub-tokyoSkyra05_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-tokyoSkyra05/anat/sub-tokyoSkyra05_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-tokyoSkyra05/anat/sub-tokyoSkyra05_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-tokyoSkyra05/anat/sub-tokyoSkyra05_T2star_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-tokyoSkyra05/anat/sub-tokyoSkyra05_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-tokyoSkyra05/anat/sub-tokyoSkyra05_T2star_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-tokyoSkyra05/anat/sub-tokyoSkyra05_space-other_T2w_label-discs_dlabel.json b/derivatives/labels/sub-tokyoSkyra05/anat/sub-tokyoSkyra05_T2w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-tokyoSkyra05/anat/sub-tokyoSkyra05_space-other_T2w_label-discs_dlabel.json rename to derivatives/labels/sub-tokyoSkyra05/anat/sub-tokyoSkyra05_T2w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-tokyoSkyra05/anat/sub-tokyoSkyra05_space-other_T2w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-tokyoSkyra05/anat/sub-tokyoSkyra05_T2w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-tokyoSkyra05/anat/sub-tokyoSkyra05_space-other_T2w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-tokyoSkyra05/anat/sub-tokyoSkyra05_T2w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-tokyoSkyra05/anat/sub-tokyoSkyra05_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-tokyoSkyra05/anat/sub-tokyoSkyra05_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-tokyoSkyra05/anat/sub-tokyoSkyra05_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-tokyoSkyra05/anat/sub-tokyoSkyra05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-tokyoSkyra05/anat/sub-tokyoSkyra05_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-tokyoSkyra05/anat/sub-tokyoSkyra05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-tokyoSkyra05/anat/sub-tokyoSkyra05_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-tokyoSkyra05/anat/sub-tokyoSkyra05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-tokyoSkyra05/anat/sub-tokyoSkyra05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-tokyoSkyra05/anat/sub-tokyoSkyra05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-tokyoSkyra05/anat/sub-tokyoSkyra05_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-tokyoSkyra05/anat/sub-tokyoSkyra05_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-tokyoSkyra05/anat/sub-tokyoSkyra05_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-tokyoSkyra05/anat/sub-tokyoSkyra05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-tokyoSkyra05/anat/sub-tokyoSkyra05_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-tokyoSkyra05/anat/sub-tokyoSkyra05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-tokyoSkyra05/anat/sub-tokyoSkyra05_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-tokyoSkyra05/anat/sub-tokyoSkyra05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-tokyoSkyra05/anat/sub-tokyoSkyra05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-tokyoSkyra05/anat/sub-tokyoSkyra05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-tokyoSkyra05/anat/sub-tokyoSkyra05_space-other_T2star_label-SC_seg.nii.gz b/derivatives/labels/sub-tokyoSkyra05/anat/sub-tokyoSkyra05_space-other_T2star_label-SC_seg.nii.gz index 8094292bd3..fb2cb8b8d3 100644 --- a/derivatives/labels/sub-tokyoSkyra05/anat/sub-tokyoSkyra05_space-other_T2star_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-tokyoSkyra05/anat/sub-tokyoSkyra05_space-other_T2star_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s14622--fda970efc51e200674fff587dfccdc3cbea20750c28f77700f6426df05d1593b.nii.gz +/annex/objects/SHA256E-s14643--8e42a4829097af067af8fc81ef0655abfc53a5c9fa3374563071109cff90c908.nii.gz diff --git a/derivatives/labels/sub-tokyoSkyra05/anat/sub-tokyoSkyra05_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-tokyoSkyra05/anat/sub-tokyoSkyra05_space-other_T2star_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-tokyoSkyra05/anat/sub-tokyoSkyra05_space-other_T2star_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-tokyoSkyra06/anat/sub-tokyoSkyra06_space-other_T1w_label-discs_dlabel.json b/derivatives/labels/sub-tokyoSkyra06/anat/sub-tokyoSkyra06_T1w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-tokyoSkyra06/anat/sub-tokyoSkyra06_space-other_T1w_label-discs_dlabel.json rename to derivatives/labels/sub-tokyoSkyra06/anat/sub-tokyoSkyra06_T1w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-tokyoSkyra06/anat/sub-tokyoSkyra06_space-other_T1w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-tokyoSkyra06/anat/sub-tokyoSkyra06_T1w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-tokyoSkyra06/anat/sub-tokyoSkyra06_space-other_T1w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-tokyoSkyra06/anat/sub-tokyoSkyra06_T1w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-tokyoSkyra06/anat/sub-tokyoSkyra06_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-tokyoSkyra06/anat/sub-tokyoSkyra06_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-tokyoSkyra06/anat/sub-tokyoSkyra06_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-tokyoSkyra06/anat/sub-tokyoSkyra06_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-tokyoSkyra06/anat/sub-tokyoSkyra06_T2star_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-tokyoSkyra06/anat/sub-tokyoSkyra06_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-tokyoSkyra06/anat/sub-tokyoSkyra06_T2star_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-tokyoSkyra06/anat/sub-tokyoSkyra06_space-other_T2w_label-discs_dlabel.json b/derivatives/labels/sub-tokyoSkyra06/anat/sub-tokyoSkyra06_T2w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-tokyoSkyra06/anat/sub-tokyoSkyra06_space-other_T2w_label-discs_dlabel.json rename to derivatives/labels/sub-tokyoSkyra06/anat/sub-tokyoSkyra06_T2w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-tokyoSkyra06/anat/sub-tokyoSkyra06_space-other_T2w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-tokyoSkyra06/anat/sub-tokyoSkyra06_T2w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-tokyoSkyra06/anat/sub-tokyoSkyra06_space-other_T2w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-tokyoSkyra06/anat/sub-tokyoSkyra06_T2w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-tokyoSkyra06/anat/sub-tokyoSkyra06_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-tokyoSkyra06/anat/sub-tokyoSkyra06_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-tokyoSkyra06/anat/sub-tokyoSkyra06_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-tokyoSkyra06/anat/sub-tokyoSkyra06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-tokyoSkyra06/anat/sub-tokyoSkyra06_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-tokyoSkyra06/anat/sub-tokyoSkyra06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-tokyoSkyra06/anat/sub-tokyoSkyra06_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-tokyoSkyra06/anat/sub-tokyoSkyra06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-tokyoSkyra06/anat/sub-tokyoSkyra06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-tokyoSkyra06/anat/sub-tokyoSkyra06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-tokyoSkyra06/anat/sub-tokyoSkyra06_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-tokyoSkyra06/anat/sub-tokyoSkyra06_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-tokyoSkyra06/anat/sub-tokyoSkyra06_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-tokyoSkyra06/anat/sub-tokyoSkyra06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-tokyoSkyra06/anat/sub-tokyoSkyra06_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-tokyoSkyra06/anat/sub-tokyoSkyra06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-tokyoSkyra06/anat/sub-tokyoSkyra06_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-tokyoSkyra06/anat/sub-tokyoSkyra06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-tokyoSkyra06/anat/sub-tokyoSkyra06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-tokyoSkyra06/anat/sub-tokyoSkyra06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-tokyoSkyra06/anat/sub-tokyoSkyra06_space-other_T2star_label-SC_seg.nii.gz b/derivatives/labels/sub-tokyoSkyra06/anat/sub-tokyoSkyra06_space-other_T2star_label-SC_seg.nii.gz index 77fb301769..3d6ad38866 100644 --- a/derivatives/labels/sub-tokyoSkyra06/anat/sub-tokyoSkyra06_space-other_T2star_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-tokyoSkyra06/anat/sub-tokyoSkyra06_space-other_T2star_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s14762--3e1d2494c29568a8ef0b69c59bfc7a7e53e6741cc1cd75d6d36ae47819c8b7b6.nii.gz +/annex/objects/SHA256E-s14783--0a5417980981254bae20aa617f5de69ea8dc664f0314b2cb16c414bcdb781fbc.nii.gz diff --git a/derivatives/labels/sub-tokyoSkyra06/anat/sub-tokyoSkyra06_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-tokyoSkyra06/anat/sub-tokyoSkyra06_space-other_T2star_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-tokyoSkyra06/anat/sub-tokyoSkyra06_space-other_T2star_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-tokyoSkyra07/anat/sub-tokyoSkyra07_space-other_T1w_label-discs_dlabel.json b/derivatives/labels/sub-tokyoSkyra07/anat/sub-tokyoSkyra07_T1w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-tokyoSkyra07/anat/sub-tokyoSkyra07_space-other_T1w_label-discs_dlabel.json rename to derivatives/labels/sub-tokyoSkyra07/anat/sub-tokyoSkyra07_T1w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-tokyoSkyra07/anat/sub-tokyoSkyra07_space-other_T1w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-tokyoSkyra07/anat/sub-tokyoSkyra07_T1w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-tokyoSkyra07/anat/sub-tokyoSkyra07_space-other_T1w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-tokyoSkyra07/anat/sub-tokyoSkyra07_T1w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-tokyoSkyra07/anat/sub-tokyoSkyra07_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-tokyoSkyra07/anat/sub-tokyoSkyra07_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-tokyoSkyra07/anat/sub-tokyoSkyra07_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-tokyoSkyra07/anat/sub-tokyoSkyra07_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-tokyoSkyra07/anat/sub-tokyoSkyra07_T2star_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-tokyoSkyra07/anat/sub-tokyoSkyra07_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-tokyoSkyra07/anat/sub-tokyoSkyra07_T2star_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-tokyoSkyra07/anat/sub-tokyoSkyra07_space-other_T2w_label-discs_dlabel.json b/derivatives/labels/sub-tokyoSkyra07/anat/sub-tokyoSkyra07_T2w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-tokyoSkyra07/anat/sub-tokyoSkyra07_space-other_T2w_label-discs_dlabel.json rename to derivatives/labels/sub-tokyoSkyra07/anat/sub-tokyoSkyra07_T2w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-tokyoSkyra07/anat/sub-tokyoSkyra07_space-other_T2w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-tokyoSkyra07/anat/sub-tokyoSkyra07_T2w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-tokyoSkyra07/anat/sub-tokyoSkyra07_space-other_T2w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-tokyoSkyra07/anat/sub-tokyoSkyra07_T2w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-tokyoSkyra07/anat/sub-tokyoSkyra07_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-tokyoSkyra07/anat/sub-tokyoSkyra07_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-tokyoSkyra07/anat/sub-tokyoSkyra07_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-tokyoSkyra07/anat/sub-tokyoSkyra07_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-tokyoSkyra07/anat/sub-tokyoSkyra07_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-tokyoSkyra07/anat/sub-tokyoSkyra07_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-tokyoSkyra07/anat/sub-tokyoSkyra07_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-tokyoSkyra07/anat/sub-tokyoSkyra07_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-tokyoSkyra07/anat/sub-tokyoSkyra07_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-tokyoSkyra07/anat/sub-tokyoSkyra07_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-tokyoSkyra07/anat/sub-tokyoSkyra07_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-tokyoSkyra07/anat/sub-tokyoSkyra07_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-tokyoSkyra07/anat/sub-tokyoSkyra07_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-tokyoSkyra07/anat/sub-tokyoSkyra07_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-tokyoSkyra07/anat/sub-tokyoSkyra07_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-tokyoSkyra07/anat/sub-tokyoSkyra07_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-tokyoSkyra07/anat/sub-tokyoSkyra07_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-tokyoSkyra07/anat/sub-tokyoSkyra07_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-tokyoSkyra07/anat/sub-tokyoSkyra07_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-tokyoSkyra07/anat/sub-tokyoSkyra07_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-tokyoSkyra07/anat/sub-tokyoSkyra07_space-other_T2star_label-SC_seg.nii.gz b/derivatives/labels/sub-tokyoSkyra07/anat/sub-tokyoSkyra07_space-other_T2star_label-SC_seg.nii.gz index fc6af8b051..0d18e106a6 100644 --- a/derivatives/labels/sub-tokyoSkyra07/anat/sub-tokyoSkyra07_space-other_T2star_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-tokyoSkyra07/anat/sub-tokyoSkyra07_space-other_T2star_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s14808--2374e3bc41de3adf259a2013bc7f587b62593ccc4f300ebf9692870c00da0f40.nii.gz +/annex/objects/SHA256E-s14829--34da99564d8bc48db56361454ca88d4344394be74540229ace4db0f4052819e5.nii.gz diff --git a/derivatives/labels/sub-tokyoSkyra07/anat/sub-tokyoSkyra07_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-tokyoSkyra07/anat/sub-tokyoSkyra07_space-other_T2star_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-tokyoSkyra07/anat/sub-tokyoSkyra07_space-other_T2star_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-ubc01/anat/sub-ubc01_space-other_T1w_label-discs_dlabel.json b/derivatives/labels/sub-ubc01/anat/sub-ubc01_T1w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-ubc01/anat/sub-ubc01_space-other_T1w_label-discs_dlabel.json rename to derivatives/labels/sub-ubc01/anat/sub-ubc01_T1w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-ubc01/anat/sub-ubc01_space-other_T1w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-ubc01/anat/sub-ubc01_T1w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-ubc01/anat/sub-ubc01_space-other_T1w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-ubc01/anat/sub-ubc01_T1w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-ubc01/anat/sub-ubc01_space-other_T2w_label-discs_dlabel.json b/derivatives/labels/sub-ubc01/anat/sub-ubc01_T2w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-ubc01/anat/sub-ubc01_space-other_T2w_label-discs_dlabel.json rename to derivatives/labels/sub-ubc01/anat/sub-ubc01_T2w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-ubc01/anat/sub-ubc01_space-other_T2w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-ubc01/anat/sub-ubc01_T2w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-ubc01/anat/sub-ubc01_space-other_T2w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-ubc01/anat/sub-ubc01_T2w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-ubc01/anat/sub-ubc01_space-other_T2star_label-SC_seg.nii.gz b/derivatives/labels/sub-ubc01/anat/sub-ubc01_space-other_T2star_label-SC_seg.nii.gz index f5a02bf29c..224c9b3396 100644 --- a/derivatives/labels/sub-ubc01/anat/sub-ubc01_space-other_T2star_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-ubc01/anat/sub-ubc01_space-other_T2star_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s14911--2637eca401a51a88461f31011cbf9c66e55e95c1a6155c3fc7d6a9ea1705dddd.nii.gz +/annex/objects/SHA256E-s14932--df5a8f56576cf6c7b563a7d66efcf91dee051109ad8c1fb1f94cb5d1afd62616.nii.gz diff --git a/derivatives/labels/sub-ubc02/anat/sub-ubc02_space-other_T1w_label-discs_dlabel.json b/derivatives/labels/sub-ubc02/anat/sub-ubc02_T1w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-ubc02/anat/sub-ubc02_space-other_T1w_label-discs_dlabel.json rename to derivatives/labels/sub-ubc02/anat/sub-ubc02_T1w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-ubc02/anat/sub-ubc02_space-other_T1w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-ubc02/anat/sub-ubc02_T1w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-ubc02/anat/sub-ubc02_space-other_T1w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-ubc02/anat/sub-ubc02_T1w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-ubc02/anat/sub-ubc02_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-ubc02/anat/sub-ubc02_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-ubc02/anat/sub-ubc02_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-ubc02/anat/sub-ubc02_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-ubc02/anat/sub-ubc02_T2star_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-ubc02/anat/sub-ubc02_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-ubc02/anat/sub-ubc02_T2star_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-ubc02/anat/sub-ubc02_space-other_T2w_label-discs_dlabel.json b/derivatives/labels/sub-ubc02/anat/sub-ubc02_T2w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-ubc02/anat/sub-ubc02_space-other_T2w_label-discs_dlabel.json rename to derivatives/labels/sub-ubc02/anat/sub-ubc02_T2w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-ubc02/anat/sub-ubc02_space-other_T2w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-ubc02/anat/sub-ubc02_T2w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-ubc02/anat/sub-ubc02_space-other_T2w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-ubc02/anat/sub-ubc02_T2w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-ubc02/anat/sub-ubc02_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-ubc02/anat/sub-ubc02_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-ubc02/anat/sub-ubc02_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-ubc02/anat/sub-ubc02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-ubc02/anat/sub-ubc02_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-ubc02/anat/sub-ubc02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-ubc02/anat/sub-ubc02_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-ubc02/anat/sub-ubc02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-ubc02/anat/sub-ubc02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-ubc02/anat/sub-ubc02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-ubc02/anat/sub-ubc02_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-ubc02/anat/sub-ubc02_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-ubc02/anat/sub-ubc02_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-ubc02/anat/sub-ubc02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-ubc02/anat/sub-ubc02_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-ubc02/anat/sub-ubc02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-ubc02/anat/sub-ubc02_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-ubc02/anat/sub-ubc02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-ubc02/anat/sub-ubc02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-ubc02/anat/sub-ubc02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-ubc02/anat/sub-ubc02_space-other_T2star_label-SC_seg.nii.gz b/derivatives/labels/sub-ubc02/anat/sub-ubc02_space-other_T2star_label-SC_seg.nii.gz index db5280a486..cdcffc41fa 100644 --- a/derivatives/labels/sub-ubc02/anat/sub-ubc02_space-other_T2star_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-ubc02/anat/sub-ubc02_space-other_T2star_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s14832--6eb3000bbfdcf41646501fd8bc2c29fdec85da560e878381d4b1a886a4555320.nii.gz +/annex/objects/SHA256E-s14853--bbb01350477b63db6163aede25edaef331c967eaed77a3043e4a46a5f14295a1.nii.gz diff --git a/derivatives/labels/sub-ubc02/anat/sub-ubc02_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-ubc02/anat/sub-ubc02_space-other_T2star_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-ubc02/anat/sub-ubc02_space-other_T2star_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-ubc03/anat/sub-ubc03_space-other_T1w_label-discs_dlabel.json b/derivatives/labels/sub-ubc03/anat/sub-ubc03_T1w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-ubc03/anat/sub-ubc03_space-other_T1w_label-discs_dlabel.json rename to derivatives/labels/sub-ubc03/anat/sub-ubc03_T1w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-ubc03/anat/sub-ubc03_space-other_T1w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-ubc03/anat/sub-ubc03_T1w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-ubc03/anat/sub-ubc03_space-other_T1w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-ubc03/anat/sub-ubc03_T1w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-ubc03/anat/sub-ubc03_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-ubc03/anat/sub-ubc03_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-ubc03/anat/sub-ubc03_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-ubc03/anat/sub-ubc03_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-ubc03/anat/sub-ubc03_T2star_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-ubc03/anat/sub-ubc03_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-ubc03/anat/sub-ubc03_T2star_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-ubc03/anat/sub-ubc03_space-other_T2w_label-discs_dlabel.json b/derivatives/labels/sub-ubc03/anat/sub-ubc03_T2w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-ubc03/anat/sub-ubc03_space-other_T2w_label-discs_dlabel.json rename to derivatives/labels/sub-ubc03/anat/sub-ubc03_T2w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-ubc03/anat/sub-ubc03_space-other_T2w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-ubc03/anat/sub-ubc03_T2w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-ubc03/anat/sub-ubc03_space-other_T2w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-ubc03/anat/sub-ubc03_T2w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-ubc03/anat/sub-ubc03_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-ubc03/anat/sub-ubc03_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-ubc03/anat/sub-ubc03_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-ubc03/anat/sub-ubc03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-ubc03/anat/sub-ubc03_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-ubc03/anat/sub-ubc03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-ubc03/anat/sub-ubc03_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-ubc03/anat/sub-ubc03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-ubc03/anat/sub-ubc03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-ubc03/anat/sub-ubc03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-ubc03/anat/sub-ubc03_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-ubc03/anat/sub-ubc03_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-ubc03/anat/sub-ubc03_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-ubc03/anat/sub-ubc03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-ubc03/anat/sub-ubc03_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-ubc03/anat/sub-ubc03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-ubc03/anat/sub-ubc03_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-ubc03/anat/sub-ubc03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-ubc03/anat/sub-ubc03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-ubc03/anat/sub-ubc03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-ubc03/anat/sub-ubc03_space-other_T2star_label-SC_seg.nii.gz b/derivatives/labels/sub-ubc03/anat/sub-ubc03_space-other_T2star_label-SC_seg.nii.gz index 70b88e29ba..5314638096 100644 --- a/derivatives/labels/sub-ubc03/anat/sub-ubc03_space-other_T2star_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-ubc03/anat/sub-ubc03_space-other_T2star_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s14717--55228173d057df60b719e17358cb200282c9c1d9f628bed02ce4a2f4bf3ed29b.nii.gz +/annex/objects/SHA256E-s14738--c3b1eca86e2d32e7fbbba24efbb9db88cbe0b5ecc4be3bca3214c50d65502d8f.nii.gz diff --git a/derivatives/labels/sub-ubc03/anat/sub-ubc03_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-ubc03/anat/sub-ubc03_space-other_T2star_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-ubc03/anat/sub-ubc03_space-other_T2star_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-ubc04/anat/sub-ubc04_space-other_T1w_label-discs_dlabel.json b/derivatives/labels/sub-ubc04/anat/sub-ubc04_T1w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-ubc04/anat/sub-ubc04_space-other_T1w_label-discs_dlabel.json rename to derivatives/labels/sub-ubc04/anat/sub-ubc04_T1w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-ubc04/anat/sub-ubc04_space-other_T1w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-ubc04/anat/sub-ubc04_T1w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-ubc04/anat/sub-ubc04_space-other_T1w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-ubc04/anat/sub-ubc04_T1w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-ubc04/anat/sub-ubc04_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-ubc04/anat/sub-ubc04_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-ubc04/anat/sub-ubc04_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-ubc04/anat/sub-ubc04_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-ubc04/anat/sub-ubc04_T2star_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-ubc04/anat/sub-ubc04_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-ubc04/anat/sub-ubc04_T2star_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-ubc04/anat/sub-ubc04_space-other_T2w_label-discs_dlabel.json b/derivatives/labels/sub-ubc04/anat/sub-ubc04_T2w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-ubc04/anat/sub-ubc04_space-other_T2w_label-discs_dlabel.json rename to derivatives/labels/sub-ubc04/anat/sub-ubc04_T2w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-ubc04/anat/sub-ubc04_space-other_T2w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-ubc04/anat/sub-ubc04_T2w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-ubc04/anat/sub-ubc04_space-other_T2w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-ubc04/anat/sub-ubc04_T2w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-ubc04/anat/sub-ubc04_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-ubc04/anat/sub-ubc04_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-ubc04/anat/sub-ubc04_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-ubc04/anat/sub-ubc04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-ubc04/anat/sub-ubc04_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-ubc04/anat/sub-ubc04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-ubc04/anat/sub-ubc04_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-ubc04/anat/sub-ubc04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-ubc04/anat/sub-ubc04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-ubc04/anat/sub-ubc04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-ubc04/anat/sub-ubc04_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-ubc04/anat/sub-ubc04_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-ubc04/anat/sub-ubc04_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-ubc04/anat/sub-ubc04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-ubc04/anat/sub-ubc04_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-ubc04/anat/sub-ubc04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-ubc04/anat/sub-ubc04_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-ubc04/anat/sub-ubc04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-ubc04/anat/sub-ubc04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-ubc04/anat/sub-ubc04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-ubc04/anat/sub-ubc04_space-other_T2star_label-SC_seg.nii.gz b/derivatives/labels/sub-ubc04/anat/sub-ubc04_space-other_T2star_label-SC_seg.nii.gz index 43f71e6bf9..212c8f6012 100644 --- a/derivatives/labels/sub-ubc04/anat/sub-ubc04_space-other_T2star_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-ubc04/anat/sub-ubc04_space-other_T2star_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s14767--21e290d6bf8ae587a0eb808658f3927de899102d2db5b5afb43a3147e9b5bd85.nii.gz +/annex/objects/SHA256E-s14788--4d987cd9923539ef64b234dac5a4fb774fb8234ead77d1f102c7920b52dd6c15.nii.gz diff --git a/derivatives/labels/sub-ubc04/anat/sub-ubc04_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-ubc04/anat/sub-ubc04_space-other_T2star_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-ubc04/anat/sub-ubc04_space-other_T2star_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-ubc05/anat/sub-ubc05_space-other_T1w_label-discs_dlabel.json b/derivatives/labels/sub-ubc05/anat/sub-ubc05_T1w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-ubc05/anat/sub-ubc05_space-other_T1w_label-discs_dlabel.json rename to derivatives/labels/sub-ubc05/anat/sub-ubc05_T1w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-ubc05/anat/sub-ubc05_space-other_T1w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-ubc05/anat/sub-ubc05_T1w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-ubc05/anat/sub-ubc05_space-other_T1w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-ubc05/anat/sub-ubc05_T1w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-ubc05/anat/sub-ubc05_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-ubc05/anat/sub-ubc05_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-ubc05/anat/sub-ubc05_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-ubc05/anat/sub-ubc05_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-ubc05/anat/sub-ubc05_T2star_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-ubc05/anat/sub-ubc05_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-ubc05/anat/sub-ubc05_T2star_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-ubc05/anat/sub-ubc05_space-other_T2w_label-discs_dlabel.json b/derivatives/labels/sub-ubc05/anat/sub-ubc05_T2w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-ubc05/anat/sub-ubc05_space-other_T2w_label-discs_dlabel.json rename to derivatives/labels/sub-ubc05/anat/sub-ubc05_T2w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-ubc05/anat/sub-ubc05_space-other_T2w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-ubc05/anat/sub-ubc05_T2w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-ubc05/anat/sub-ubc05_space-other_T2w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-ubc05/anat/sub-ubc05_T2w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-ubc05/anat/sub-ubc05_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-ubc05/anat/sub-ubc05_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-ubc05/anat/sub-ubc05_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-ubc05/anat/sub-ubc05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-ubc05/anat/sub-ubc05_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-ubc05/anat/sub-ubc05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-ubc05/anat/sub-ubc05_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-ubc05/anat/sub-ubc05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-ubc05/anat/sub-ubc05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-ubc05/anat/sub-ubc05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-ubc05/anat/sub-ubc05_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-ubc05/anat/sub-ubc05_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-ubc05/anat/sub-ubc05_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-ubc05/anat/sub-ubc05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-ubc05/anat/sub-ubc05_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-ubc05/anat/sub-ubc05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-ubc05/anat/sub-ubc05_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-ubc05/anat/sub-ubc05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-ubc05/anat/sub-ubc05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-ubc05/anat/sub-ubc05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-ubc05/anat/sub-ubc05_space-other_T2star_label-SC_seg.nii.gz b/derivatives/labels/sub-ubc05/anat/sub-ubc05_space-other_T2star_label-SC_seg.nii.gz index 581d179fa3..7d874e0be0 100644 --- a/derivatives/labels/sub-ubc05/anat/sub-ubc05_space-other_T2star_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-ubc05/anat/sub-ubc05_space-other_T2star_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s14981--784059ddb1cd5d5fa004642bbe334bda7ab5931515c97a705a1f1e2ba2f24a1e.nii.gz +/annex/objects/SHA256E-s15002--9d32df41cc7a7f792792f9a8ce5b9a27078b6c9b317ee078a40d35c6360978a0.nii.gz diff --git a/derivatives/labels/sub-ubc05/anat/sub-ubc05_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-ubc05/anat/sub-ubc05_space-other_T2star_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-ubc05/anat/sub-ubc05_space-other_T2star_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-ubc06/anat/sub-ubc06_space-other_T1w_label-discs_dlabel.json b/derivatives/labels/sub-ubc06/anat/sub-ubc06_T1w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-ubc06/anat/sub-ubc06_space-other_T1w_label-discs_dlabel.json rename to derivatives/labels/sub-ubc06/anat/sub-ubc06_T1w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-ubc06/anat/sub-ubc06_space-other_T1w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-ubc06/anat/sub-ubc06_T1w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-ubc06/anat/sub-ubc06_space-other_T1w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-ubc06/anat/sub-ubc06_T1w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-ubc06/anat/sub-ubc06_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-ubc06/anat/sub-ubc06_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-ubc06/anat/sub-ubc06_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-ubc06/anat/sub-ubc06_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-ubc06/anat/sub-ubc06_T2star_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-ubc06/anat/sub-ubc06_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-ubc06/anat/sub-ubc06_T2star_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-ubc06/anat/sub-ubc06_space-other_T2w_label-discs_dlabel.json b/derivatives/labels/sub-ubc06/anat/sub-ubc06_T2w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-ubc06/anat/sub-ubc06_space-other_T2w_label-discs_dlabel.json rename to derivatives/labels/sub-ubc06/anat/sub-ubc06_T2w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-ubc06/anat/sub-ubc06_space-other_T2w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-ubc06/anat/sub-ubc06_T2w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-ubc06/anat/sub-ubc06_space-other_T2w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-ubc06/anat/sub-ubc06_T2w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-ubc06/anat/sub-ubc06_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-ubc06/anat/sub-ubc06_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-ubc06/anat/sub-ubc06_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-ubc06/anat/sub-ubc06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-ubc06/anat/sub-ubc06_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-ubc06/anat/sub-ubc06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-ubc06/anat/sub-ubc06_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-ubc06/anat/sub-ubc06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-ubc06/anat/sub-ubc06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-ubc06/anat/sub-ubc06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-ubc06/anat/sub-ubc06_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-ubc06/anat/sub-ubc06_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-ubc06/anat/sub-ubc06_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-ubc06/anat/sub-ubc06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-ubc06/anat/sub-ubc06_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-ubc06/anat/sub-ubc06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-ubc06/anat/sub-ubc06_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-ubc06/anat/sub-ubc06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-ubc06/anat/sub-ubc06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-ubc06/anat/sub-ubc06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-ubc06/anat/sub-ubc06_space-other_T2star_label-SC_seg.nii.gz b/derivatives/labels/sub-ubc06/anat/sub-ubc06_space-other_T2star_label-SC_seg.nii.gz index b82b13654a..81b0dbe968 100644 --- a/derivatives/labels/sub-ubc06/anat/sub-ubc06_space-other_T2star_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-ubc06/anat/sub-ubc06_space-other_T2star_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s14776--69ebaaa42242486c22a287d70d116067eb032f8992facb00b6bef0336ea96e52.nii.gz +/annex/objects/SHA256E-s14797--9f552dc9cdcaa11ae166cdd1e85f7343ad612745483e440cb5889a36af5e962f.nii.gz diff --git a/derivatives/labels/sub-ubc06/anat/sub-ubc06_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-ubc06/anat/sub-ubc06_space-other_T2star_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-ubc06/anat/sub-ubc06_space-other_T2star_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-ucdavis01/anat/sub-ucdavis01_space-other_T1w_label-discs_dlabel.json b/derivatives/labels/sub-ucdavis01/anat/sub-ucdavis01_T1w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-ucdavis01/anat/sub-ucdavis01_space-other_T1w_label-discs_dlabel.json rename to derivatives/labels/sub-ucdavis01/anat/sub-ucdavis01_T1w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-ucdavis01/anat/sub-ucdavis01_space-other_T1w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-ucdavis01/anat/sub-ucdavis01_T1w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-ucdavis01/anat/sub-ucdavis01_space-other_T1w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-ucdavis01/anat/sub-ucdavis01_T1w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-ucdavis01/anat/sub-ucdavis01_space-other_T2w_label-discs_dlabel.json b/derivatives/labels/sub-ucdavis01/anat/sub-ucdavis01_T2w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-ucdavis01/anat/sub-ucdavis01_space-other_T2w_label-discs_dlabel.json rename to derivatives/labels/sub-ucdavis01/anat/sub-ucdavis01_T2w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-ucdavis01/anat/sub-ucdavis01_space-other_T2w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-ucdavis01/anat/sub-ucdavis01_T2w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-ucdavis01/anat/sub-ucdavis01_space-other_T2w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-ucdavis01/anat/sub-ucdavis01_T2w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-ucdavis01/anat/sub-ucdavis01_space-other_T2star_label-SC_seg.nii.gz b/derivatives/labels/sub-ucdavis01/anat/sub-ucdavis01_space-other_T2star_label-SC_seg.nii.gz index 2aa39d1220..165b06c3a2 100644 --- a/derivatives/labels/sub-ucdavis01/anat/sub-ucdavis01_space-other_T2star_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-ucdavis01/anat/sub-ucdavis01_space-other_T2star_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s14993--e1aaf14158003587bf21c298c00eca68ffa3bbd08e809fc25315a8f8b3ace61f.nii.gz +/annex/objects/SHA256E-s15014--1b41bc15046fb01e9e28ea16a444aeaf845e04d2a7a3d75e1d40a1389f5b6a52.nii.gz diff --git a/derivatives/labels/sub-ucdavis02/anat/sub-ucdavis02_space-other_T1w_label-discs_dlabel.json b/derivatives/labels/sub-ucdavis02/anat/sub-ucdavis02_T1w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-ucdavis02/anat/sub-ucdavis02_space-other_T1w_label-discs_dlabel.json rename to derivatives/labels/sub-ucdavis02/anat/sub-ucdavis02_T1w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-ucdavis02/anat/sub-ucdavis02_space-other_T1w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-ucdavis02/anat/sub-ucdavis02_T1w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-ucdavis02/anat/sub-ucdavis02_space-other_T1w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-ucdavis02/anat/sub-ucdavis02_T1w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-ucdavis02/anat/sub-ucdavis02_space-other_T2w_label-discs_dlabel.json b/derivatives/labels/sub-ucdavis02/anat/sub-ucdavis02_T2w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-ucdavis02/anat/sub-ucdavis02_space-other_T2w_label-discs_dlabel.json rename to derivatives/labels/sub-ucdavis02/anat/sub-ucdavis02_T2w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-ucdavis02/anat/sub-ucdavis02_space-other_T2w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-ucdavis02/anat/sub-ucdavis02_T2w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-ucdavis02/anat/sub-ucdavis02_space-other_T2w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-ucdavis02/anat/sub-ucdavis02_T2w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-ucdavis02/anat/sub-ucdavis02_space-other_T2star_label-SC_seg.nii.gz b/derivatives/labels/sub-ucdavis02/anat/sub-ucdavis02_space-other_T2star_label-SC_seg.nii.gz index c8a1a656a9..a3c5ead767 100644 --- a/derivatives/labels/sub-ucdavis02/anat/sub-ucdavis02_space-other_T2star_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-ucdavis02/anat/sub-ucdavis02_space-other_T2star_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s6819--87006ca9f907bd4c5a91a6918359d41f2296c7fc7227f9511c0459af50016454.nii.gz +/annex/objects/SHA256E-s28402--92a86ec8bb9e3a4a54766823ae690cd3de11451915c60b8d9c4150b35dcfb786.nii.gz diff --git a/derivatives/labels/sub-ucdavis03/anat/sub-ucdavis03_space-other_T1w_label-discs_dlabel.json b/derivatives/labels/sub-ucdavis03/anat/sub-ucdavis03_T1w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-ucdavis03/anat/sub-ucdavis03_space-other_T1w_label-discs_dlabel.json rename to derivatives/labels/sub-ucdavis03/anat/sub-ucdavis03_T1w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-ucdavis03/anat/sub-ucdavis03_space-other_T1w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-ucdavis03/anat/sub-ucdavis03_T1w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-ucdavis03/anat/sub-ucdavis03_space-other_T1w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-ucdavis03/anat/sub-ucdavis03_T1w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-ucdavis03/anat/sub-ucdavis03_space-other_T2w_label-discs_dlabel.json b/derivatives/labels/sub-ucdavis03/anat/sub-ucdavis03_T2w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-ucdavis03/anat/sub-ucdavis03_space-other_T2w_label-discs_dlabel.json rename to derivatives/labels/sub-ucdavis03/anat/sub-ucdavis03_T2w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-ucdavis03/anat/sub-ucdavis03_space-other_T2w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-ucdavis03/anat/sub-ucdavis03_T2w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-ucdavis03/anat/sub-ucdavis03_space-other_T2w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-ucdavis03/anat/sub-ucdavis03_T2w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-ucdavis03/anat/sub-ucdavis03_space-other_T2star_label-SC_seg.nii.gz b/derivatives/labels/sub-ucdavis03/anat/sub-ucdavis03_space-other_T2star_label-SC_seg.nii.gz index 91c346d5bb..233ff359b6 100644 --- a/derivatives/labels/sub-ucdavis03/anat/sub-ucdavis03_space-other_T2star_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-ucdavis03/anat/sub-ucdavis03_space-other_T2star_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s15133--f2b6c5e2903a97117acab7a33ad5b655ac68b9621397568e8b8091e5683b9fc4.nii.gz +/annex/objects/SHA256E-s15154--142423153f845ec376c5ce13c7c41d52073cf4ca9da861425b1e832ea2937d90.nii.gz diff --git a/derivatives/labels/sub-ucdavis04/anat/sub-ucdavis04_space-other_T1w_label-discs_dlabel.json b/derivatives/labels/sub-ucdavis04/anat/sub-ucdavis04_T1w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-ucdavis04/anat/sub-ucdavis04_space-other_T1w_label-discs_dlabel.json rename to derivatives/labels/sub-ucdavis04/anat/sub-ucdavis04_T1w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-ucdavis04/anat/sub-ucdavis04_space-other_T1w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-ucdavis04/anat/sub-ucdavis04_T1w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-ucdavis04/anat/sub-ucdavis04_space-other_T1w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-ucdavis04/anat/sub-ucdavis04_T1w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-ucdavis04/anat/sub-ucdavis04_space-other_T2w_label-discs_dlabel.json b/derivatives/labels/sub-ucdavis04/anat/sub-ucdavis04_T2w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-ucdavis04/anat/sub-ucdavis04_space-other_T2w_label-discs_dlabel.json rename to derivatives/labels/sub-ucdavis04/anat/sub-ucdavis04_T2w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-ucdavis04/anat/sub-ucdavis04_space-other_T2w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-ucdavis04/anat/sub-ucdavis04_T2w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-ucdavis04/anat/sub-ucdavis04_space-other_T2w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-ucdavis04/anat/sub-ucdavis04_T2w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-ucdavis04/anat/sub-ucdavis04_space-other_T2star_label-SC_seg.nii.gz b/derivatives/labels/sub-ucdavis04/anat/sub-ucdavis04_space-other_T2star_label-SC_seg.nii.gz index dd3059ef40..268d1ece30 100644 --- a/derivatives/labels/sub-ucdavis04/anat/sub-ucdavis04_space-other_T2star_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-ucdavis04/anat/sub-ucdavis04_space-other_T2star_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s14843--8673ae1c62b4368606d34fb8c14222395240581cff6793d467f73b1ae83540eb.nii.gz +/annex/objects/SHA256E-s14864--56aa0bed968b0538bc0c7ea0fd9da5cd88e9f25c4a9009ca80aae56f3c34da5a.nii.gz diff --git a/derivatives/labels/sub-ucdavis05/anat/sub-ucdavis05_space-other_T1w_label-discs_dlabel.json b/derivatives/labels/sub-ucdavis05/anat/sub-ucdavis05_T1w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-ucdavis05/anat/sub-ucdavis05_space-other_T1w_label-discs_dlabel.json rename to derivatives/labels/sub-ucdavis05/anat/sub-ucdavis05_T1w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-ucdavis05/anat/sub-ucdavis05_space-other_T1w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-ucdavis05/anat/sub-ucdavis05_T1w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-ucdavis05/anat/sub-ucdavis05_space-other_T1w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-ucdavis05/anat/sub-ucdavis05_T1w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-ucdavis05/anat/sub-ucdavis05_space-other_T2w_label-discs_dlabel.json b/derivatives/labels/sub-ucdavis05/anat/sub-ucdavis05_T2w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-ucdavis05/anat/sub-ucdavis05_space-other_T2w_label-discs_dlabel.json rename to derivatives/labels/sub-ucdavis05/anat/sub-ucdavis05_T2w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-ucdavis05/anat/sub-ucdavis05_space-other_T2w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-ucdavis05/anat/sub-ucdavis05_T2w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-ucdavis05/anat/sub-ucdavis05_space-other_T2w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-ucdavis05/anat/sub-ucdavis05_T2w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-ucdavis05/anat/sub-ucdavis05_space-other_T2star_label-SC_seg.nii.gz b/derivatives/labels/sub-ucdavis05/anat/sub-ucdavis05_space-other_T2star_label-SC_seg.nii.gz index b03522daf3..114aa519a1 100644 --- a/derivatives/labels/sub-ucdavis05/anat/sub-ucdavis05_space-other_T2star_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-ucdavis05/anat/sub-ucdavis05_space-other_T2star_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s14804--41c31972b922273704a7cce9dcdf429414aece26f93500f5cf7a770e8d833569.nii.gz +/annex/objects/SHA256E-s14825--154e34c412d3ae8db4ba672408a360101843c549d2bf75ae38c91d476317828d.nii.gz diff --git a/derivatives/labels/sub-ucdavis06/anat/sub-ucdavis06_space-other_T1w_label-discs_dlabel.json b/derivatives/labels/sub-ucdavis06/anat/sub-ucdavis06_T1w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-ucdavis06/anat/sub-ucdavis06_space-other_T1w_label-discs_dlabel.json rename to derivatives/labels/sub-ucdavis06/anat/sub-ucdavis06_T1w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-ucdavis06/anat/sub-ucdavis06_space-other_T1w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-ucdavis06/anat/sub-ucdavis06_T1w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-ucdavis06/anat/sub-ucdavis06_space-other_T1w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-ucdavis06/anat/sub-ucdavis06_T1w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-ucdavis06/anat/sub-ucdavis06_space-other_T2w_label-discs_dlabel.json b/derivatives/labels/sub-ucdavis06/anat/sub-ucdavis06_T2w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-ucdavis06/anat/sub-ucdavis06_space-other_T2w_label-discs_dlabel.json rename to derivatives/labels/sub-ucdavis06/anat/sub-ucdavis06_T2w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-ucdavis06/anat/sub-ucdavis06_space-other_T2w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-ucdavis06/anat/sub-ucdavis06_T2w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-ucdavis06/anat/sub-ucdavis06_space-other_T2w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-ucdavis06/anat/sub-ucdavis06_T2w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-ucdavis06/anat/sub-ucdavis06_space-other_T2star_label-SC_seg.nii.gz b/derivatives/labels/sub-ucdavis06/anat/sub-ucdavis06_space-other_T2star_label-SC_seg.nii.gz index e6e6f8e740..b4f4d7a889 100644 --- a/derivatives/labels/sub-ucdavis06/anat/sub-ucdavis06_space-other_T2star_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-ucdavis06/anat/sub-ucdavis06_space-other_T2star_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s14827--119d54f09f8b7e6ccb90341e5a601d57ae38de6975d6634cf34d0ee613dcc8d8.nii.gz +/annex/objects/SHA256E-s14848--04059f7182c856ccb546d25c00f94617c86aa8b6978a4e882dbb028f870890ac.nii.gz diff --git a/derivatives/labels/sub-ucdavis07/anat/sub-ucdavis07_space-other_T1w_label-discs_dlabel.json b/derivatives/labels/sub-ucdavis07/anat/sub-ucdavis07_T1w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-ucdavis07/anat/sub-ucdavis07_space-other_T1w_label-discs_dlabel.json rename to derivatives/labels/sub-ucdavis07/anat/sub-ucdavis07_T1w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-ucdavis07/anat/sub-ucdavis07_space-other_T1w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-ucdavis07/anat/sub-ucdavis07_T1w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-ucdavis07/anat/sub-ucdavis07_space-other_T1w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-ucdavis07/anat/sub-ucdavis07_T1w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-ucdavis07/anat/sub-ucdavis07_space-other_T2w_label-discs_dlabel.json b/derivatives/labels/sub-ucdavis07/anat/sub-ucdavis07_T2w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-ucdavis07/anat/sub-ucdavis07_space-other_T2w_label-discs_dlabel.json rename to derivatives/labels/sub-ucdavis07/anat/sub-ucdavis07_T2w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-ucdavis07/anat/sub-ucdavis07_space-other_T2w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-ucdavis07/anat/sub-ucdavis07_T2w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-ucdavis07/anat/sub-ucdavis07_space-other_T2w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-ucdavis07/anat/sub-ucdavis07_T2w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-ucdavis07/anat/sub-ucdavis07_space-other_T2star_label-SC_seg.nii.gz b/derivatives/labels/sub-ucdavis07/anat/sub-ucdavis07_space-other_T2star_label-SC_seg.nii.gz index dea357b76a..ef80645bad 100644 --- a/derivatives/labels/sub-ucdavis07/anat/sub-ucdavis07_space-other_T2star_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-ucdavis07/anat/sub-ucdavis07_space-other_T2star_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s15047--55b40c4cb349cf5c01c6e3bcf21420104e5188f0496690d0be14122e4e512e67.nii.gz +/annex/objects/SHA256E-s15068--a00c45de84472f8a5ae8ab077e5263ed379552baf3eadaf688b7785577fba388.nii.gz diff --git a/derivatives/labels/sub-ucl01/anat/sub-ucl01_space-other_T1w_label-discs_dlabel.json b/derivatives/labels/sub-ucl01/anat/sub-ucl01_T1w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-ucl01/anat/sub-ucl01_space-other_T1w_label-discs_dlabel.json rename to derivatives/labels/sub-ucl01/anat/sub-ucl01_T1w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-ucl01/anat/sub-ucl01_space-other_T1w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-ucl01/anat/sub-ucl01_T1w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-ucl01/anat/sub-ucl01_space-other_T1w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-ucl01/anat/sub-ucl01_T1w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-ucl01/anat/sub-ucl01_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-ucl01/anat/sub-ucl01_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-ucl01/anat/sub-ucl01_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-ucl01/anat/sub-ucl01_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-ucl01/anat/sub-ucl01_T2star_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-ucl01/anat/sub-ucl01_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-ucl01/anat/sub-ucl01_T2star_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-ucl01/anat/sub-ucl01_space-other_T2w_label-discs_dlabel.json b/derivatives/labels/sub-ucl01/anat/sub-ucl01_T2w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-ucl01/anat/sub-ucl01_space-other_T2w_label-discs_dlabel.json rename to derivatives/labels/sub-ucl01/anat/sub-ucl01_T2w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-ucl01/anat/sub-ucl01_space-other_T2w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-ucl01/anat/sub-ucl01_T2w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-ucl01/anat/sub-ucl01_space-other_T2w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-ucl01/anat/sub-ucl01_T2w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-ucl01/anat/sub-ucl01_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-ucl01/anat/sub-ucl01_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-ucl01/anat/sub-ucl01_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-ucl01/anat/sub-ucl01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-ucl01/anat/sub-ucl01_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-ucl01/anat/sub-ucl01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-ucl01/anat/sub-ucl01_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-ucl01/anat/sub-ucl01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-ucl01/anat/sub-ucl01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-ucl01/anat/sub-ucl01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-ucl01/anat/sub-ucl01_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-ucl01/anat/sub-ucl01_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-ucl01/anat/sub-ucl01_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-ucl01/anat/sub-ucl01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-ucl01/anat/sub-ucl01_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-ucl01/anat/sub-ucl01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-ucl01/anat/sub-ucl01_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-ucl01/anat/sub-ucl01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-ucl01/anat/sub-ucl01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-ucl01/anat/sub-ucl01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-ucl01/anat/sub-ucl01_space-other_T2star_label-SC_seg.nii.gz b/derivatives/labels/sub-ucl01/anat/sub-ucl01_space-other_T2star_label-SC_seg.nii.gz index ac1d7fe402..cfdb683c8c 100644 --- a/derivatives/labels/sub-ucl01/anat/sub-ucl01_space-other_T2star_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-ucl01/anat/sub-ucl01_space-other_T2star_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s8204--90ac62999551c0780fb395477b119d83411559a60f041b548c57aa089fb70556.nii.gz +/annex/objects/SHA256E-s8225--188cfa6628f4b53ea06fb2f132eaa75c3e86fb7bab0f0a1b4463ddc102c12f05.nii.gz diff --git a/derivatives/labels/sub-ucl01/anat/sub-ucl01_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-ucl01/anat/sub-ucl01_space-other_T2star_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-ucl01/anat/sub-ucl01_space-other_T2star_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-ucl02/anat/sub-ucl02_space-other_T1w_label-discs_dlabel.json b/derivatives/labels/sub-ucl02/anat/sub-ucl02_T1w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-ucl02/anat/sub-ucl02_space-other_T1w_label-discs_dlabel.json rename to derivatives/labels/sub-ucl02/anat/sub-ucl02_T1w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-ucl02/anat/sub-ucl02_space-other_T1w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-ucl02/anat/sub-ucl02_T1w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-ucl02/anat/sub-ucl02_space-other_T1w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-ucl02/anat/sub-ucl02_T1w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-ucl02/anat/sub-ucl02_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-ucl02/anat/sub-ucl02_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-ucl02/anat/sub-ucl02_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-ucl02/anat/sub-ucl02_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-ucl02/anat/sub-ucl02_T2star_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-ucl02/anat/sub-ucl02_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-ucl02/anat/sub-ucl02_T2star_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-ucl02/anat/sub-ucl02_space-other_T2w_label-discs_dlabel.json b/derivatives/labels/sub-ucl02/anat/sub-ucl02_T2w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-ucl02/anat/sub-ucl02_space-other_T2w_label-discs_dlabel.json rename to derivatives/labels/sub-ucl02/anat/sub-ucl02_T2w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-ucl02/anat/sub-ucl02_space-other_T2w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-ucl02/anat/sub-ucl02_T2w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-ucl02/anat/sub-ucl02_space-other_T2w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-ucl02/anat/sub-ucl02_T2w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-ucl02/anat/sub-ucl02_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-ucl02/anat/sub-ucl02_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-ucl02/anat/sub-ucl02_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-ucl02/anat/sub-ucl02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-ucl02/anat/sub-ucl02_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-ucl02/anat/sub-ucl02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-ucl02/anat/sub-ucl02_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-ucl02/anat/sub-ucl02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-ucl02/anat/sub-ucl02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-ucl02/anat/sub-ucl02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-ucl02/anat/sub-ucl02_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-ucl02/anat/sub-ucl02_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-ucl02/anat/sub-ucl02_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-ucl02/anat/sub-ucl02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-ucl02/anat/sub-ucl02_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-ucl02/anat/sub-ucl02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-ucl02/anat/sub-ucl02_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-ucl02/anat/sub-ucl02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-ucl02/anat/sub-ucl02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-ucl02/anat/sub-ucl02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-ucl02/anat/sub-ucl02_space-other_T2star_label-SC_seg.nii.gz b/derivatives/labels/sub-ucl02/anat/sub-ucl02_space-other_T2star_label-SC_seg.nii.gz index 1e307d9c04..7e9b719224 100644 --- a/derivatives/labels/sub-ucl02/anat/sub-ucl02_space-other_T2star_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-ucl02/anat/sub-ucl02_space-other_T2star_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s8416--18990542bbdfb8435343811ff5f19a903a1e51639164367f047625604a7b05ec.nii.gz +/annex/objects/SHA256E-s8437--b5fe5a3645993e2f1b3de5d9a217ab6ee4a8c7fc24f185f74ff16c9a64f29d6d.nii.gz diff --git a/derivatives/labels/sub-ucl02/anat/sub-ucl02_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-ucl02/anat/sub-ucl02_space-other_T2star_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-ucl02/anat/sub-ucl02_space-other_T2star_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-ucl03/anat/sub-ucl03_space-other_T1w_label-discs_dlabel.json b/derivatives/labels/sub-ucl03/anat/sub-ucl03_T1w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-ucl03/anat/sub-ucl03_space-other_T1w_label-discs_dlabel.json rename to derivatives/labels/sub-ucl03/anat/sub-ucl03_T1w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-ucl03/anat/sub-ucl03_space-other_T1w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-ucl03/anat/sub-ucl03_T1w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-ucl03/anat/sub-ucl03_space-other_T1w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-ucl03/anat/sub-ucl03_T1w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-ucl03/anat/sub-ucl03_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-ucl03/anat/sub-ucl03_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-ucl03/anat/sub-ucl03_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-ucl03/anat/sub-ucl03_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-ucl03/anat/sub-ucl03_T2star_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-ucl03/anat/sub-ucl03_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-ucl03/anat/sub-ucl03_T2star_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-ucl03/anat/sub-ucl03_space-other_T2w_label-discs_dlabel.json b/derivatives/labels/sub-ucl03/anat/sub-ucl03_T2w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-ucl03/anat/sub-ucl03_space-other_T2w_label-discs_dlabel.json rename to derivatives/labels/sub-ucl03/anat/sub-ucl03_T2w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-ucl03/anat/sub-ucl03_space-other_T2w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-ucl03/anat/sub-ucl03_T2w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-ucl03/anat/sub-ucl03_space-other_T2w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-ucl03/anat/sub-ucl03_T2w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-ucl03/anat/sub-ucl03_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-ucl03/anat/sub-ucl03_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-ucl03/anat/sub-ucl03_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-ucl03/anat/sub-ucl03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-ucl03/anat/sub-ucl03_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-ucl03/anat/sub-ucl03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-ucl03/anat/sub-ucl03_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-ucl03/anat/sub-ucl03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-ucl03/anat/sub-ucl03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-ucl03/anat/sub-ucl03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-ucl03/anat/sub-ucl03_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-ucl03/anat/sub-ucl03_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-ucl03/anat/sub-ucl03_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-ucl03/anat/sub-ucl03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-ucl03/anat/sub-ucl03_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-ucl03/anat/sub-ucl03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-ucl03/anat/sub-ucl03_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-ucl03/anat/sub-ucl03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-ucl03/anat/sub-ucl03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-ucl03/anat/sub-ucl03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-ucl03/anat/sub-ucl03_space-other_T2star_label-SC_seg.nii.gz b/derivatives/labels/sub-ucl03/anat/sub-ucl03_space-other_T2star_label-SC_seg.nii.gz index d2759acf48..9409f7072d 100644 --- a/derivatives/labels/sub-ucl03/anat/sub-ucl03_space-other_T2star_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-ucl03/anat/sub-ucl03_space-other_T2star_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s8224--8f299677f5db4cd7976b352e89e527983051b38a3b1ebe71590e13b9b3f3398b.nii.gz +/annex/objects/SHA256E-s8245--63cd2e62437fdfe20188c863a790e654453529b248bc2245166566d2306f7c79.nii.gz diff --git a/derivatives/labels/sub-ucl03/anat/sub-ucl03_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-ucl03/anat/sub-ucl03_space-other_T2star_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-ucl03/anat/sub-ucl03_space-other_T2star_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-ucl04/anat/sub-ucl04_space-other_T1w_label-discs_dlabel.json b/derivatives/labels/sub-ucl04/anat/sub-ucl04_T1w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-ucl04/anat/sub-ucl04_space-other_T1w_label-discs_dlabel.json rename to derivatives/labels/sub-ucl04/anat/sub-ucl04_T1w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-ucl04/anat/sub-ucl04_space-other_T1w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-ucl04/anat/sub-ucl04_T1w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-ucl04/anat/sub-ucl04_space-other_T1w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-ucl04/anat/sub-ucl04_T1w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-ucl04/anat/sub-ucl04_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-ucl04/anat/sub-ucl04_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-ucl04/anat/sub-ucl04_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-ucl04/anat/sub-ucl04_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-ucl04/anat/sub-ucl04_T2star_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-ucl04/anat/sub-ucl04_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-ucl04/anat/sub-ucl04_T2star_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-ucl04/anat/sub-ucl04_space-other_T2w_label-discs_dlabel.json b/derivatives/labels/sub-ucl04/anat/sub-ucl04_T2w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-ucl04/anat/sub-ucl04_space-other_T2w_label-discs_dlabel.json rename to derivatives/labels/sub-ucl04/anat/sub-ucl04_T2w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-ucl04/anat/sub-ucl04_space-other_T2w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-ucl04/anat/sub-ucl04_T2w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-ucl04/anat/sub-ucl04_space-other_T2w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-ucl04/anat/sub-ucl04_T2w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-ucl04/anat/sub-ucl04_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-ucl04/anat/sub-ucl04_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-ucl04/anat/sub-ucl04_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-ucl04/anat/sub-ucl04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-ucl04/anat/sub-ucl04_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-ucl04/anat/sub-ucl04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-ucl04/anat/sub-ucl04_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-ucl04/anat/sub-ucl04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-ucl04/anat/sub-ucl04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-ucl04/anat/sub-ucl04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-ucl04/anat/sub-ucl04_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-ucl04/anat/sub-ucl04_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-ucl04/anat/sub-ucl04_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-ucl04/anat/sub-ucl04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-ucl04/anat/sub-ucl04_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-ucl04/anat/sub-ucl04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-ucl04/anat/sub-ucl04_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-ucl04/anat/sub-ucl04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-ucl04/anat/sub-ucl04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-ucl04/anat/sub-ucl04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-ucl04/anat/sub-ucl04_space-other_T2star_label-SC_seg.nii.gz b/derivatives/labels/sub-ucl04/anat/sub-ucl04_space-other_T2star_label-SC_seg.nii.gz index 16713f8ad7..ca6c1b5bf5 100644 --- a/derivatives/labels/sub-ucl04/anat/sub-ucl04_space-other_T2star_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-ucl04/anat/sub-ucl04_space-other_T2star_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s8154--8273f7d940992889c25bf4177a3756ae54bdc1c64d75ce85143479c7c2d9db7a.nii.gz +/annex/objects/SHA256E-s8175--0a6bb2f6e05654d0c19a71d79a6795d3d29b0dd0daa02647d6dff576e1e4e5a4.nii.gz diff --git a/derivatives/labels/sub-ucl04/anat/sub-ucl04_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-ucl04/anat/sub-ucl04_space-other_T2star_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-ucl04/anat/sub-ucl04_space-other_T2star_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-ucl05/anat/sub-ucl05_space-other_T1w_label-discs_dlabel.json b/derivatives/labels/sub-ucl05/anat/sub-ucl05_T1w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-ucl05/anat/sub-ucl05_space-other_T1w_label-discs_dlabel.json rename to derivatives/labels/sub-ucl05/anat/sub-ucl05_T1w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-ucl05/anat/sub-ucl05_space-other_T1w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-ucl05/anat/sub-ucl05_T1w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-ucl05/anat/sub-ucl05_space-other_T1w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-ucl05/anat/sub-ucl05_T1w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-ucl05/anat/sub-ucl05_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-ucl05/anat/sub-ucl05_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-ucl05/anat/sub-ucl05_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-ucl05/anat/sub-ucl05_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-ucl05/anat/sub-ucl05_T2star_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-ucl05/anat/sub-ucl05_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-ucl05/anat/sub-ucl05_T2star_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-ucl05/anat/sub-ucl05_space-other_T2w_label-discs_dlabel.json b/derivatives/labels/sub-ucl05/anat/sub-ucl05_T2w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-ucl05/anat/sub-ucl05_space-other_T2w_label-discs_dlabel.json rename to derivatives/labels/sub-ucl05/anat/sub-ucl05_T2w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-ucl05/anat/sub-ucl05_space-other_T2w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-ucl05/anat/sub-ucl05_T2w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-ucl05/anat/sub-ucl05_space-other_T2w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-ucl05/anat/sub-ucl05_T2w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-ucl05/anat/sub-ucl05_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-ucl05/anat/sub-ucl05_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-ucl05/anat/sub-ucl05_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-ucl05/anat/sub-ucl05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-ucl05/anat/sub-ucl05_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-ucl05/anat/sub-ucl05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-ucl05/anat/sub-ucl05_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-ucl05/anat/sub-ucl05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-ucl05/anat/sub-ucl05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-ucl05/anat/sub-ucl05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-ucl05/anat/sub-ucl05_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-ucl05/anat/sub-ucl05_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-ucl05/anat/sub-ucl05_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-ucl05/anat/sub-ucl05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-ucl05/anat/sub-ucl05_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-ucl05/anat/sub-ucl05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-ucl05/anat/sub-ucl05_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-ucl05/anat/sub-ucl05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-ucl05/anat/sub-ucl05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-ucl05/anat/sub-ucl05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-ucl05/anat/sub-ucl05_space-other_T2star_label-SC_seg.nii.gz b/derivatives/labels/sub-ucl05/anat/sub-ucl05_space-other_T2star_label-SC_seg.nii.gz index 8115a24ecb..7dd743f636 100644 --- a/derivatives/labels/sub-ucl05/anat/sub-ucl05_space-other_T2star_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-ucl05/anat/sub-ucl05_space-other_T2star_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s8328--75f808e04d7a39761dcc781cce922694e16a44c422026796257a4c18bc588f0d.nii.gz +/annex/objects/SHA256E-s8349--dabec21d770d9ba86a8dcf062bd29a2e2a928a63c03cf79c9b555cc98fa1477b.nii.gz diff --git a/derivatives/labels/sub-ucl05/anat/sub-ucl05_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-ucl05/anat/sub-ucl05_space-other_T2star_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-ucl05/anat/sub-ucl05_space-other_T2star_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-ucl06/anat/sub-ucl06_space-other_T1w_label-discs_dlabel.json b/derivatives/labels/sub-ucl06/anat/sub-ucl06_T1w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-ucl06/anat/sub-ucl06_space-other_T1w_label-discs_dlabel.json rename to derivatives/labels/sub-ucl06/anat/sub-ucl06_T1w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-ucl06/anat/sub-ucl06_space-other_T1w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-ucl06/anat/sub-ucl06_T1w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-ucl06/anat/sub-ucl06_space-other_T1w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-ucl06/anat/sub-ucl06_T1w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-ucl06/anat/sub-ucl06_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-ucl06/anat/sub-ucl06_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-ucl06/anat/sub-ucl06_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-ucl06/anat/sub-ucl06_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-ucl06/anat/sub-ucl06_T2star_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-ucl06/anat/sub-ucl06_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-ucl06/anat/sub-ucl06_T2star_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-ucl06/anat/sub-ucl06_space-other_T2w_label-discs_dlabel.json b/derivatives/labels/sub-ucl06/anat/sub-ucl06_T2w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-ucl06/anat/sub-ucl06_space-other_T2w_label-discs_dlabel.json rename to derivatives/labels/sub-ucl06/anat/sub-ucl06_T2w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-ucl06/anat/sub-ucl06_space-other_T2w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-ucl06/anat/sub-ucl06_T2w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-ucl06/anat/sub-ucl06_space-other_T2w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-ucl06/anat/sub-ucl06_T2w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-ucl06/anat/sub-ucl06_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-ucl06/anat/sub-ucl06_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-ucl06/anat/sub-ucl06_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-ucl06/anat/sub-ucl06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-ucl06/anat/sub-ucl06_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-ucl06/anat/sub-ucl06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-ucl06/anat/sub-ucl06_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-ucl06/anat/sub-ucl06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-ucl06/anat/sub-ucl06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-ucl06/anat/sub-ucl06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-ucl06/anat/sub-ucl06_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-ucl06/anat/sub-ucl06_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-ucl06/anat/sub-ucl06_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-ucl06/anat/sub-ucl06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-ucl06/anat/sub-ucl06_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-ucl06/anat/sub-ucl06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-ucl06/anat/sub-ucl06_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-ucl06/anat/sub-ucl06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-ucl06/anat/sub-ucl06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-ucl06/anat/sub-ucl06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-ucl06/anat/sub-ucl06_space-other_T2star_label-SC_seg.nii.gz b/derivatives/labels/sub-ucl06/anat/sub-ucl06_space-other_T2star_label-SC_seg.nii.gz index d56fc6ca52..041f7f80e4 100644 --- a/derivatives/labels/sub-ucl06/anat/sub-ucl06_space-other_T2star_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-ucl06/anat/sub-ucl06_space-other_T2star_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s8139--3f1ed076ec9f6724b59c6c901a3f9c12e199e3c12305b286e327f180c7ed997b.nii.gz +/annex/objects/SHA256E-s8160--06fb38e4c9616ca359cb0dd9811f8e01fa4e5886d6e1f9872bf4370044b52d86.nii.gz diff --git a/derivatives/labels/sub-ucl06/anat/sub-ucl06_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-ucl06/anat/sub-ucl06_space-other_T2star_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-ucl06/anat/sub-ucl06_space-other_T2star_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-unf01/anat/sub-unf01_space-other_T1w_label-discs_dlabel.json b/derivatives/labels/sub-unf01/anat/sub-unf01_T1w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-unf01/anat/sub-unf01_space-other_T1w_label-discs_dlabel.json rename to derivatives/labels/sub-unf01/anat/sub-unf01_T1w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-unf01/anat/sub-unf01_space-other_T1w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-unf01/anat/sub-unf01_T1w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-unf01/anat/sub-unf01_space-other_T1w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-unf01/anat/sub-unf01_T1w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-unf01/anat/sub-unf01_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-unf01/anat/sub-unf01_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-unf01/anat/sub-unf01_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-unf01/anat/sub-unf01_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-unf01/anat/sub-unf01_T2star_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-unf01/anat/sub-unf01_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-unf01/anat/sub-unf01_T2star_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-unf01/anat/sub-unf01_space-other_T2w_label-discs_dlabel.json b/derivatives/labels/sub-unf01/anat/sub-unf01_T2w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-unf01/anat/sub-unf01_space-other_T2w_label-discs_dlabel.json rename to derivatives/labels/sub-unf01/anat/sub-unf01_T2w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-unf01/anat/sub-unf01_space-other_T2w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-unf01/anat/sub-unf01_T2w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-unf01/anat/sub-unf01_space-other_T2w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-unf01/anat/sub-unf01_T2w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-unf01/anat/sub-unf01_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-unf01/anat/sub-unf01_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-unf01/anat/sub-unf01_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-unf01/anat/sub-unf01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-unf01/anat/sub-unf01_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-unf01/anat/sub-unf01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-unf01/anat/sub-unf01_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-unf01/anat/sub-unf01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-unf01/anat/sub-unf01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-unf01/anat/sub-unf01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-unf01/anat/sub-unf01_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-unf01/anat/sub-unf01_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-unf01/anat/sub-unf01_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-unf01/anat/sub-unf01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-unf01/anat/sub-unf01_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-unf01/anat/sub-unf01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-unf01/anat/sub-unf01_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-unf01/anat/sub-unf01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-unf01/anat/sub-unf01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-unf01/anat/sub-unf01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-unf01/anat/sub-unf01_space-other_T2star_label-SC_seg.nii.gz b/derivatives/labels/sub-unf01/anat/sub-unf01_space-other_T2star_label-SC_seg.nii.gz index 3f02b2ba65..be8654ee6a 100644 --- a/derivatives/labels/sub-unf01/anat/sub-unf01_space-other_T2star_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-unf01/anat/sub-unf01_space-other_T2star_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s14919--fd58cc0e0843f486c4096811c85580fe56540e1b720f4e4f3cc0ad07062c6d11.nii.gz +/annex/objects/SHA256E-s14940--1fa4345d51ac1033331d7a5bdb0de90b7e57fd608091d78eb0d734fb7d93a61a.nii.gz diff --git a/derivatives/labels/sub-unf01/anat/sub-unf01_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-unf01/anat/sub-unf01_space-other_T2star_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-unf01/anat/sub-unf01_space-other_T2star_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-unf02/anat/sub-unf02_space-other_T1w_label-discs_dlabel.json b/derivatives/labels/sub-unf02/anat/sub-unf02_T1w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-unf02/anat/sub-unf02_space-other_T1w_label-discs_dlabel.json rename to derivatives/labels/sub-unf02/anat/sub-unf02_T1w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-unf02/anat/sub-unf02_space-other_T1w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-unf02/anat/sub-unf02_T1w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-unf02/anat/sub-unf02_space-other_T1w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-unf02/anat/sub-unf02_T1w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-unf02/anat/sub-unf02_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-unf02/anat/sub-unf02_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-unf02/anat/sub-unf02_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-unf02/anat/sub-unf02_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-unf02/anat/sub-unf02_T2star_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-unf02/anat/sub-unf02_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-unf02/anat/sub-unf02_T2star_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-unf02/anat/sub-unf02_space-other_T2w_label-discs_dlabel.json b/derivatives/labels/sub-unf02/anat/sub-unf02_T2w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-unf02/anat/sub-unf02_space-other_T2w_label-discs_dlabel.json rename to derivatives/labels/sub-unf02/anat/sub-unf02_T2w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-unf02/anat/sub-unf02_space-other_T2w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-unf02/anat/sub-unf02_T2w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-unf02/anat/sub-unf02_space-other_T2w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-unf02/anat/sub-unf02_T2w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-unf02/anat/sub-unf02_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-unf02/anat/sub-unf02_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-unf02/anat/sub-unf02_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-unf02/anat/sub-unf02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-unf02/anat/sub-unf02_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-unf02/anat/sub-unf02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-unf02/anat/sub-unf02_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-unf02/anat/sub-unf02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-unf02/anat/sub-unf02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-unf02/anat/sub-unf02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-unf02/anat/sub-unf02_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-unf02/anat/sub-unf02_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-unf02/anat/sub-unf02_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-unf02/anat/sub-unf02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-unf02/anat/sub-unf02_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-unf02/anat/sub-unf02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-unf02/anat/sub-unf02_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-unf02/anat/sub-unf02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-unf02/anat/sub-unf02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-unf02/anat/sub-unf02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-unf02/anat/sub-unf02_space-other_T2star_label-SC_seg.nii.gz b/derivatives/labels/sub-unf02/anat/sub-unf02_space-other_T2star_label-SC_seg.nii.gz index e5b80da61a..a886d4692e 100644 --- a/derivatives/labels/sub-unf02/anat/sub-unf02_space-other_T2star_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-unf02/anat/sub-unf02_space-other_T2star_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s14803--7f642af097002333bc0456a056a5039836265d1251c8e91096c4060c90fa079a.nii.gz +/annex/objects/SHA256E-s14824--23d9325020ecf4aa045211f24d2b1767447cc99fb1e0695a74323a817b90575c.nii.gz diff --git a/derivatives/labels/sub-unf02/anat/sub-unf02_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-unf02/anat/sub-unf02_space-other_T2star_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-unf02/anat/sub-unf02_space-other_T2star_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-unf03/anat/sub-unf03_space-other_T1w_label-discs_dlabel.json b/derivatives/labels/sub-unf03/anat/sub-unf03_T1w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-unf03/anat/sub-unf03_space-other_T1w_label-discs_dlabel.json rename to derivatives/labels/sub-unf03/anat/sub-unf03_T1w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-unf03/anat/sub-unf03_space-other_T1w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-unf03/anat/sub-unf03_T1w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-unf03/anat/sub-unf03_space-other_T1w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-unf03/anat/sub-unf03_T1w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-unf03/anat/sub-unf03_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-unf03/anat/sub-unf03_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-unf03/anat/sub-unf03_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-unf03/anat/sub-unf03_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-unf03/anat/sub-unf03_T2star_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-unf03/anat/sub-unf03_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-unf03/anat/sub-unf03_T2star_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-unf03/anat/sub-unf03_space-other_T2w_label-discs_dlabel.json b/derivatives/labels/sub-unf03/anat/sub-unf03_T2w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-unf03/anat/sub-unf03_space-other_T2w_label-discs_dlabel.json rename to derivatives/labels/sub-unf03/anat/sub-unf03_T2w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-unf03/anat/sub-unf03_space-other_T2w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-unf03/anat/sub-unf03_T2w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-unf03/anat/sub-unf03_space-other_T2w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-unf03/anat/sub-unf03_T2w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-unf03/anat/sub-unf03_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-unf03/anat/sub-unf03_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-unf03/anat/sub-unf03_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-unf03/anat/sub-unf03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-unf03/anat/sub-unf03_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-unf03/anat/sub-unf03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-unf03/anat/sub-unf03_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-unf03/anat/sub-unf03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-unf03/anat/sub-unf03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-unf03/anat/sub-unf03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-unf03/anat/sub-unf03_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-unf03/anat/sub-unf03_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-unf03/anat/sub-unf03_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-unf03/anat/sub-unf03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-unf03/anat/sub-unf03_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-unf03/anat/sub-unf03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-unf03/anat/sub-unf03_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-unf03/anat/sub-unf03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-unf03/anat/sub-unf03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-unf03/anat/sub-unf03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-unf03/anat/sub-unf03_space-other_T2star_label-SC_seg.nii.gz b/derivatives/labels/sub-unf03/anat/sub-unf03_space-other_T2star_label-SC_seg.nii.gz index ed63bdb5f2..13d1f3aad3 100644 --- a/derivatives/labels/sub-unf03/anat/sub-unf03_space-other_T2star_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-unf03/anat/sub-unf03_space-other_T2star_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s14680--de592907deaaaff97170bd75e442fe95efa90758062d6be05408fa93a4258081.nii.gz +/annex/objects/SHA256E-s14701--eec22a5b595c545111b0078a84f8688407dd670b3885742d593a2f0963c255cc.nii.gz diff --git a/derivatives/labels/sub-unf03/anat/sub-unf03_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-unf03/anat/sub-unf03_space-other_T2star_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-unf03/anat/sub-unf03_space-other_T2star_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-unf04/anat/sub-unf04_space-other_T1w_label-discs_dlabel.json b/derivatives/labels/sub-unf04/anat/sub-unf04_T1w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-unf04/anat/sub-unf04_space-other_T1w_label-discs_dlabel.json rename to derivatives/labels/sub-unf04/anat/sub-unf04_T1w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-unf04/anat/sub-unf04_space-other_T1w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-unf04/anat/sub-unf04_T1w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-unf04/anat/sub-unf04_space-other_T1w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-unf04/anat/sub-unf04_T1w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-unf04/anat/sub-unf04_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-unf04/anat/sub-unf04_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-unf04/anat/sub-unf04_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-unf04/anat/sub-unf04_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-unf04/anat/sub-unf04_T2star_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-unf04/anat/sub-unf04_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-unf04/anat/sub-unf04_T2star_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-unf04/anat/sub-unf04_space-other_T2w_label-discs_dlabel.json b/derivatives/labels/sub-unf04/anat/sub-unf04_T2w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-unf04/anat/sub-unf04_space-other_T2w_label-discs_dlabel.json rename to derivatives/labels/sub-unf04/anat/sub-unf04_T2w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-unf04/anat/sub-unf04_space-other_T2w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-unf04/anat/sub-unf04_T2w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-unf04/anat/sub-unf04_space-other_T2w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-unf04/anat/sub-unf04_T2w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-unf04/anat/sub-unf04_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-unf04/anat/sub-unf04_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-unf04/anat/sub-unf04_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-unf04/anat/sub-unf04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-unf04/anat/sub-unf04_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-unf04/anat/sub-unf04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-unf04/anat/sub-unf04_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-unf04/anat/sub-unf04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-unf04/anat/sub-unf04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-unf04/anat/sub-unf04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-unf04/anat/sub-unf04_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-unf04/anat/sub-unf04_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-unf04/anat/sub-unf04_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-unf04/anat/sub-unf04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-unf04/anat/sub-unf04_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-unf04/anat/sub-unf04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-unf04/anat/sub-unf04_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-unf04/anat/sub-unf04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-unf04/anat/sub-unf04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-unf04/anat/sub-unf04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-unf04/anat/sub-unf04_space-other_T2star_label-SC_seg.nii.gz b/derivatives/labels/sub-unf04/anat/sub-unf04_space-other_T2star_label-SC_seg.nii.gz index a6c84113fd..2ce3109039 100644 --- a/derivatives/labels/sub-unf04/anat/sub-unf04_space-other_T2star_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-unf04/anat/sub-unf04_space-other_T2star_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s6878--717ef68083d7ca7c2a33af0fdae9cbebda32b73587c863fb79cc6e36a62d1fc0.nii.gz +/annex/objects/SHA256E-s28491--2ee31f0d82a0a52046b3928c2415c7d3088e955cbbf6810b22f5f5384f3e3f6b.nii.gz diff --git a/derivatives/labels/sub-unf04/anat/sub-unf04_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-unf04/anat/sub-unf04_space-other_T2star_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-unf04/anat/sub-unf04_space-other_T2star_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-unf05/anat/sub-unf05_space-other_T1w_label-discs_dlabel.json b/derivatives/labels/sub-unf05/anat/sub-unf05_T1w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-unf05/anat/sub-unf05_space-other_T1w_label-discs_dlabel.json rename to derivatives/labels/sub-unf05/anat/sub-unf05_T1w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-unf05/anat/sub-unf05_space-other_T1w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-unf05/anat/sub-unf05_T1w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-unf05/anat/sub-unf05_space-other_T1w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-unf05/anat/sub-unf05_T1w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-unf05/anat/sub-unf05_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-unf05/anat/sub-unf05_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-unf05/anat/sub-unf05_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-unf05/anat/sub-unf05_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-unf05/anat/sub-unf05_T2star_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-unf05/anat/sub-unf05_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-unf05/anat/sub-unf05_T2star_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-unf05/anat/sub-unf05_space-other_T2w_label-discs_dlabel.json b/derivatives/labels/sub-unf05/anat/sub-unf05_T2w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-unf05/anat/sub-unf05_space-other_T2w_label-discs_dlabel.json rename to derivatives/labels/sub-unf05/anat/sub-unf05_T2w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-unf05/anat/sub-unf05_space-other_T2w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-unf05/anat/sub-unf05_T2w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-unf05/anat/sub-unf05_space-other_T2w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-unf05/anat/sub-unf05_T2w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-unf05/anat/sub-unf05_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-unf05/anat/sub-unf05_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-unf05/anat/sub-unf05_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-unf05/anat/sub-unf05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-unf05/anat/sub-unf05_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-unf05/anat/sub-unf05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-unf05/anat/sub-unf05_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-unf05/anat/sub-unf05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-unf05/anat/sub-unf05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-unf05/anat/sub-unf05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-unf05/anat/sub-unf05_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-unf05/anat/sub-unf05_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-unf05/anat/sub-unf05_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-unf05/anat/sub-unf05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-unf05/anat/sub-unf05_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-unf05/anat/sub-unf05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-unf05/anat/sub-unf05_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-unf05/anat/sub-unf05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-unf05/anat/sub-unf05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-unf05/anat/sub-unf05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-unf05/anat/sub-unf05_space-other_T2star_label-SC_seg.nii.gz b/derivatives/labels/sub-unf05/anat/sub-unf05_space-other_T2star_label-SC_seg.nii.gz index a03df39713..f6ba942a17 100644 --- a/derivatives/labels/sub-unf05/anat/sub-unf05_space-other_T2star_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-unf05/anat/sub-unf05_space-other_T2star_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s14827--3c1582ac2de8a5d00864506a0a75607bf95b5aae62c74ed1337cf3687dfe1018.nii.gz +/annex/objects/SHA256E-s14847--5c9cf3b572589fa27869c978d3dbbe21523236b3539b3df38fa5f1163111e02a.nii.gz diff --git a/derivatives/labels/sub-unf05/anat/sub-unf05_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-unf05/anat/sub-unf05_space-other_T2star_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-unf05/anat/sub-unf05_space-other_T2star_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-unf06/anat/sub-unf06_space-other_T1w_label-discs_dlabel.json b/derivatives/labels/sub-unf06/anat/sub-unf06_T1w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-unf06/anat/sub-unf06_space-other_T1w_label-discs_dlabel.json rename to derivatives/labels/sub-unf06/anat/sub-unf06_T1w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-unf06/anat/sub-unf06_space-other_T1w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-unf06/anat/sub-unf06_T1w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-unf06/anat/sub-unf06_space-other_T1w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-unf06/anat/sub-unf06_T1w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-unf06/anat/sub-unf06_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-unf06/anat/sub-unf06_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-unf06/anat/sub-unf06_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-unf06/anat/sub-unf06_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-unf06/anat/sub-unf06_T2star_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-unf06/anat/sub-unf06_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-unf06/anat/sub-unf06_T2star_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-unf06/anat/sub-unf06_space-other_T2w_label-discs_dlabel.json b/derivatives/labels/sub-unf06/anat/sub-unf06_T2w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-unf06/anat/sub-unf06_space-other_T2w_label-discs_dlabel.json rename to derivatives/labels/sub-unf06/anat/sub-unf06_T2w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-unf06/anat/sub-unf06_space-other_T2w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-unf06/anat/sub-unf06_T2w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-unf06/anat/sub-unf06_space-other_T2w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-unf06/anat/sub-unf06_T2w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-unf06/anat/sub-unf06_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-unf06/anat/sub-unf06_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-unf06/anat/sub-unf06_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-unf06/anat/sub-unf06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-unf06/anat/sub-unf06_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-unf06/anat/sub-unf06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-unf06/anat/sub-unf06_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-unf06/anat/sub-unf06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-unf06/anat/sub-unf06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-unf06/anat/sub-unf06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-unf06/anat/sub-unf06_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-unf06/anat/sub-unf06_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-unf06/anat/sub-unf06_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-unf06/anat/sub-unf06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-unf06/anat/sub-unf06_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-unf06/anat/sub-unf06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-unf06/anat/sub-unf06_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-unf06/anat/sub-unf06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-unf06/anat/sub-unf06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-unf06/anat/sub-unf06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-unf06/anat/sub-unf06_space-other_T2star_label-SC_seg.nii.gz b/derivatives/labels/sub-unf06/anat/sub-unf06_space-other_T2star_label-SC_seg.nii.gz index b09488d0f6..366cc5fbff 100644 --- a/derivatives/labels/sub-unf06/anat/sub-unf06_space-other_T2star_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-unf06/anat/sub-unf06_space-other_T2star_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s14880--e51ad4e0061b9fb6db33d6f9b704612552bc3abcf5e97b0d03062a0b26167a35.nii.gz +/annex/objects/SHA256E-s14901--52ea193a51aa527e32206236ba52e36ea39e81489b92b7f64ec6b3d0691f5fc1.nii.gz diff --git a/derivatives/labels/sub-unf06/anat/sub-unf06_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-unf06/anat/sub-unf06_space-other_T2star_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-unf06/anat/sub-unf06_space-other_T2star_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-unf07/anat/sub-unf07_space-other_T1w_label-discs_dlabel.json b/derivatives/labels/sub-unf07/anat/sub-unf07_T1w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-unf07/anat/sub-unf07_space-other_T1w_label-discs_dlabel.json rename to derivatives/labels/sub-unf07/anat/sub-unf07_T1w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-unf07/anat/sub-unf07_space-other_T1w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-unf07/anat/sub-unf07_T1w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-unf07/anat/sub-unf07_space-other_T1w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-unf07/anat/sub-unf07_T1w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-unf07/anat/sub-unf07_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-unf07/anat/sub-unf07_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-unf07/anat/sub-unf07_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-unf07/anat/sub-unf07_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-unf07/anat/sub-unf07_T2star_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-unf07/anat/sub-unf07_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-unf07/anat/sub-unf07_T2star_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-unf07/anat/sub-unf07_space-other_T2w_label-discs_dlabel.json b/derivatives/labels/sub-unf07/anat/sub-unf07_T2w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-unf07/anat/sub-unf07_space-other_T2w_label-discs_dlabel.json rename to derivatives/labels/sub-unf07/anat/sub-unf07_T2w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-unf07/anat/sub-unf07_space-other_T2w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-unf07/anat/sub-unf07_T2w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-unf07/anat/sub-unf07_space-other_T2w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-unf07/anat/sub-unf07_T2w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-unf07/anat/sub-unf07_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-unf07/anat/sub-unf07_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-unf07/anat/sub-unf07_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-unf07/anat/sub-unf07_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-unf07/anat/sub-unf07_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-unf07/anat/sub-unf07_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-unf07/anat/sub-unf07_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-unf07/anat/sub-unf07_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-unf07/anat/sub-unf07_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-unf07/anat/sub-unf07_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-unf07/anat/sub-unf07_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-unf07/anat/sub-unf07_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-unf07/anat/sub-unf07_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-unf07/anat/sub-unf07_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-unf07/anat/sub-unf07_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-unf07/anat/sub-unf07_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-unf07/anat/sub-unf07_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-unf07/anat/sub-unf07_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-unf07/anat/sub-unf07_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-unf07/anat/sub-unf07_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-unf07/anat/sub-unf07_space-other_T2star_label-SC_seg.nii.gz b/derivatives/labels/sub-unf07/anat/sub-unf07_space-other_T2star_label-SC_seg.nii.gz index 3db0844678..a65b9de3c2 100644 --- a/derivatives/labels/sub-unf07/anat/sub-unf07_space-other_T2star_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-unf07/anat/sub-unf07_space-other_T2star_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s14996--f25b449d16fd2769851b50f8133ca5b1561e4aeb09300d750493e2e2313f0a6a.nii.gz +/annex/objects/SHA256E-s15017--92a550fb1413723f59cd2d45c4a946500caaac3abbc0572a9dddeda5f4cc5710.nii.gz diff --git a/derivatives/labels/sub-unf07/anat/sub-unf07_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-unf07/anat/sub-unf07_space-other_T2star_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-unf07/anat/sub-unf07_space-other_T2star_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-vallHebron01/anat/sub-vallHebron01_space-other_T1w_label-discs_dlabel.json b/derivatives/labels/sub-vallHebron01/anat/sub-vallHebron01_T1w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-vallHebron01/anat/sub-vallHebron01_space-other_T1w_label-discs_dlabel.json rename to derivatives/labels/sub-vallHebron01/anat/sub-vallHebron01_T1w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-vallHebron01/anat/sub-vallHebron01_space-other_T1w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-vallHebron01/anat/sub-vallHebron01_T1w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-vallHebron01/anat/sub-vallHebron01_space-other_T1w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-vallHebron01/anat/sub-vallHebron01_T1w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-vallHebron01/anat/sub-vallHebron01_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-vallHebron01/anat/sub-vallHebron01_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-vallHebron01/anat/sub-vallHebron01_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-vallHebron01/anat/sub-vallHebron01_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-vallHebron01/anat/sub-vallHebron01_T2star_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-vallHebron01/anat/sub-vallHebron01_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-vallHebron01/anat/sub-vallHebron01_T2star_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-vallHebron01/anat/sub-vallHebron01_space-other_T2w_label-discs_dlabel.json b/derivatives/labels/sub-vallHebron01/anat/sub-vallHebron01_T2w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-vallHebron01/anat/sub-vallHebron01_space-other_T2w_label-discs_dlabel.json rename to derivatives/labels/sub-vallHebron01/anat/sub-vallHebron01_T2w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-vallHebron01/anat/sub-vallHebron01_space-other_T2w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-vallHebron01/anat/sub-vallHebron01_T2w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-vallHebron01/anat/sub-vallHebron01_space-other_T2w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-vallHebron01/anat/sub-vallHebron01_T2w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-vallHebron01/anat/sub-vallHebron01_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-vallHebron01/anat/sub-vallHebron01_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-vallHebron01/anat/sub-vallHebron01_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-vallHebron01/anat/sub-vallHebron01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-vallHebron01/anat/sub-vallHebron01_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-vallHebron01/anat/sub-vallHebron01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-vallHebron01/anat/sub-vallHebron01_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-vallHebron01/anat/sub-vallHebron01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-vallHebron01/anat/sub-vallHebron01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-vallHebron01/anat/sub-vallHebron01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-vallHebron01/anat/sub-vallHebron01_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-vallHebron01/anat/sub-vallHebron01_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-vallHebron01/anat/sub-vallHebron01_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-vallHebron01/anat/sub-vallHebron01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-vallHebron01/anat/sub-vallHebron01_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-vallHebron01/anat/sub-vallHebron01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-vallHebron01/anat/sub-vallHebron01_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-vallHebron01/anat/sub-vallHebron01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-vallHebron01/anat/sub-vallHebron01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-vallHebron01/anat/sub-vallHebron01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-vallHebron01/anat/sub-vallHebron01_space-other_T2star_label-SC_seg.nii.gz b/derivatives/labels/sub-vallHebron01/anat/sub-vallHebron01_space-other_T2star_label-SC_seg.nii.gz index ecd4bd0384..aae3f26f6b 100644 --- a/derivatives/labels/sub-vallHebron01/anat/sub-vallHebron01_space-other_T2star_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-vallHebron01/anat/sub-vallHebron01_space-other_T2star_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s6982--6dcac180df748955111d99756744568cc19b94bd2767f0e6292333103a26421e.nii.gz +/annex/objects/SHA256E-s28670--374f8262b429b67eedcffadef58fa84ad1c42d1a1f794b3c7271d9511110e3c8.nii.gz diff --git a/derivatives/labels/sub-vallHebron01/anat/sub-vallHebron01_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-vallHebron01/anat/sub-vallHebron01_space-other_T2star_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-vallHebron01/anat/sub-vallHebron01_space-other_T2star_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-vallHebron02/anat/sub-vallHebron02_space-other_T1w_label-discs_dlabel.json b/derivatives/labels/sub-vallHebron02/anat/sub-vallHebron02_T1w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-vallHebron02/anat/sub-vallHebron02_space-other_T1w_label-discs_dlabel.json rename to derivatives/labels/sub-vallHebron02/anat/sub-vallHebron02_T1w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-vallHebron02/anat/sub-vallHebron02_space-other_T1w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-vallHebron02/anat/sub-vallHebron02_T1w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-vallHebron02/anat/sub-vallHebron02_space-other_T1w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-vallHebron02/anat/sub-vallHebron02_T1w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-vallHebron02/anat/sub-vallHebron02_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-vallHebron02/anat/sub-vallHebron02_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-vallHebron02/anat/sub-vallHebron02_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-vallHebron02/anat/sub-vallHebron02_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-vallHebron02/anat/sub-vallHebron02_T2star_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-vallHebron02/anat/sub-vallHebron02_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-vallHebron02/anat/sub-vallHebron02_T2star_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-vallHebron02/anat/sub-vallHebron02_space-other_T2w_label-discs_dlabel.json b/derivatives/labels/sub-vallHebron02/anat/sub-vallHebron02_T2w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-vallHebron02/anat/sub-vallHebron02_space-other_T2w_label-discs_dlabel.json rename to derivatives/labels/sub-vallHebron02/anat/sub-vallHebron02_T2w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-vallHebron02/anat/sub-vallHebron02_space-other_T2w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-vallHebron02/anat/sub-vallHebron02_T2w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-vallHebron02/anat/sub-vallHebron02_space-other_T2w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-vallHebron02/anat/sub-vallHebron02_T2w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-vallHebron02/anat/sub-vallHebron02_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-vallHebron02/anat/sub-vallHebron02_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-vallHebron02/anat/sub-vallHebron02_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-vallHebron02/anat/sub-vallHebron02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-vallHebron02/anat/sub-vallHebron02_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-vallHebron02/anat/sub-vallHebron02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-vallHebron02/anat/sub-vallHebron02_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-vallHebron02/anat/sub-vallHebron02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-vallHebron02/anat/sub-vallHebron02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-vallHebron02/anat/sub-vallHebron02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-vallHebron02/anat/sub-vallHebron02_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-vallHebron02/anat/sub-vallHebron02_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-vallHebron02/anat/sub-vallHebron02_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-vallHebron02/anat/sub-vallHebron02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-vallHebron02/anat/sub-vallHebron02_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-vallHebron02/anat/sub-vallHebron02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-vallHebron02/anat/sub-vallHebron02_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-vallHebron02/anat/sub-vallHebron02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-vallHebron02/anat/sub-vallHebron02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-vallHebron02/anat/sub-vallHebron02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-vallHebron02/anat/sub-vallHebron02_space-other_T2star_label-SC_seg.nii.gz b/derivatives/labels/sub-vallHebron02/anat/sub-vallHebron02_space-other_T2star_label-SC_seg.nii.gz index fb14f49c83..6f4390afb4 100644 --- a/derivatives/labels/sub-vallHebron02/anat/sub-vallHebron02_space-other_T2star_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-vallHebron02/anat/sub-vallHebron02_space-other_T2star_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s6892--14e7592dfca8e099f29dbe2d30265c164eaffee5851ef84e0d7021cc17d4a7e3.nii.gz +/annex/objects/SHA256E-s28549--a496d7c7cbca360b60e901b4be43aa27c9cd022fb8058246590e871e2258f244.nii.gz diff --git a/derivatives/labels/sub-vallHebron02/anat/sub-vallHebron02_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-vallHebron02/anat/sub-vallHebron02_space-other_T2star_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-vallHebron02/anat/sub-vallHebron02_space-other_T2star_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-vallHebron03/anat/sub-vallHebron03_space-other_T1w_label-discs_dlabel.json b/derivatives/labels/sub-vallHebron03/anat/sub-vallHebron03_T1w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-vallHebron03/anat/sub-vallHebron03_space-other_T1w_label-discs_dlabel.json rename to derivatives/labels/sub-vallHebron03/anat/sub-vallHebron03_T1w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-vallHebron03/anat/sub-vallHebron03_space-other_T1w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-vallHebron03/anat/sub-vallHebron03_T1w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-vallHebron03/anat/sub-vallHebron03_space-other_T1w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-vallHebron03/anat/sub-vallHebron03_T1w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-vallHebron03/anat/sub-vallHebron03_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-vallHebron03/anat/sub-vallHebron03_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-vallHebron03/anat/sub-vallHebron03_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-vallHebron03/anat/sub-vallHebron03_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-vallHebron03/anat/sub-vallHebron03_T2star_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-vallHebron03/anat/sub-vallHebron03_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-vallHebron03/anat/sub-vallHebron03_T2star_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-vallHebron03/anat/sub-vallHebron03_space-other_T2w_label-discs_dlabel.json b/derivatives/labels/sub-vallHebron03/anat/sub-vallHebron03_T2w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-vallHebron03/anat/sub-vallHebron03_space-other_T2w_label-discs_dlabel.json rename to derivatives/labels/sub-vallHebron03/anat/sub-vallHebron03_T2w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-vallHebron03/anat/sub-vallHebron03_space-other_T2w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-vallHebron03/anat/sub-vallHebron03_T2w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-vallHebron03/anat/sub-vallHebron03_space-other_T2w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-vallHebron03/anat/sub-vallHebron03_T2w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-vallHebron03/anat/sub-vallHebron03_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-vallHebron03/anat/sub-vallHebron03_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-vallHebron03/anat/sub-vallHebron03_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-vallHebron03/anat/sub-vallHebron03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-vallHebron03/anat/sub-vallHebron03_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-vallHebron03/anat/sub-vallHebron03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-vallHebron03/anat/sub-vallHebron03_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-vallHebron03/anat/sub-vallHebron03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-vallHebron03/anat/sub-vallHebron03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-vallHebron03/anat/sub-vallHebron03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-vallHebron03/anat/sub-vallHebron03_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-vallHebron03/anat/sub-vallHebron03_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-vallHebron03/anat/sub-vallHebron03_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-vallHebron03/anat/sub-vallHebron03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-vallHebron03/anat/sub-vallHebron03_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-vallHebron03/anat/sub-vallHebron03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-vallHebron03/anat/sub-vallHebron03_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-vallHebron03/anat/sub-vallHebron03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-vallHebron03/anat/sub-vallHebron03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-vallHebron03/anat/sub-vallHebron03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-vallHebron03/anat/sub-vallHebron03_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.json b/derivatives/labels/sub-vallHebron03/anat/sub-vallHebron03_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.json new file mode 100644 index 0000000000..e537a137e5 --- /dev/null +++ b/derivatives/labels/sub-vallHebron03/anat/sub-vallHebron03_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.json @@ -0,0 +1,11 @@ +{ + "SpatialReference": { + "Orientation": "RPI", + "Resampling": "1x1x1" + }, + "GeneratedBy": [ + { + "Description": "Manual label of C2 and C5 mid-vertebrae, at the center of the spinal cord." + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-vallHebron03/anat/sub-vallHebron03_space-other_T1w_RPI_r_labels-manual.nii.gz b/derivatives/labels/sub-vallHebron03/anat/sub-vallHebron03_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-vallHebron03/anat/sub-vallHebron03_space-other_T1w_RPI_r_labels-manual.nii.gz rename to derivatives/labels/sub-vallHebron03/anat/sub-vallHebron03_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.nii.gz diff --git a/derivatives/labels/sub-vallHebron03/anat/sub-vallHebron03_space-other_T2star_label-SC_seg.nii.gz b/derivatives/labels/sub-vallHebron03/anat/sub-vallHebron03_space-other_T2star_label-SC_seg.nii.gz index a22760dc39..8ab5b141c4 100644 --- a/derivatives/labels/sub-vallHebron03/anat/sub-vallHebron03_space-other_T2star_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-vallHebron03/anat/sub-vallHebron03_space-other_T2star_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s14841--443a4657b546f57fbbec1dfe4b9085e6afca6f558c0ac6e87af3daa3dfa0ffb5.nii.gz +/annex/objects/SHA256E-s14862--e0320dd5460903f89aae3686f2c2d81a065f87a15039f2f88eb7b4a2046794df.nii.gz diff --git a/derivatives/labels/sub-vallHebron03/anat/sub-vallHebron03_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-vallHebron03/anat/sub-vallHebron03_space-other_T2star_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-vallHebron03/anat/sub-vallHebron03_space-other_T2star_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-vallHebron04/anat/sub-vallHebron04_space-other_T1w_label-discs_dlabel.json b/derivatives/labels/sub-vallHebron04/anat/sub-vallHebron04_T1w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-vallHebron04/anat/sub-vallHebron04_space-other_T1w_label-discs_dlabel.json rename to derivatives/labels/sub-vallHebron04/anat/sub-vallHebron04_T1w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-vallHebron04/anat/sub-vallHebron04_space-other_T1w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-vallHebron04/anat/sub-vallHebron04_T1w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-vallHebron04/anat/sub-vallHebron04_space-other_T1w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-vallHebron04/anat/sub-vallHebron04_T1w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-vallHebron04/anat/sub-vallHebron04_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-vallHebron04/anat/sub-vallHebron04_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-vallHebron04/anat/sub-vallHebron04_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-vallHebron04/anat/sub-vallHebron04_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-vallHebron04/anat/sub-vallHebron04_T2star_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-vallHebron04/anat/sub-vallHebron04_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-vallHebron04/anat/sub-vallHebron04_T2star_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-vallHebron04/anat/sub-vallHebron04_space-other_T2w_label-discs_dlabel.json b/derivatives/labels/sub-vallHebron04/anat/sub-vallHebron04_T2w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-vallHebron04/anat/sub-vallHebron04_space-other_T2w_label-discs_dlabel.json rename to derivatives/labels/sub-vallHebron04/anat/sub-vallHebron04_T2w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-vallHebron04/anat/sub-vallHebron04_space-other_T2w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-vallHebron04/anat/sub-vallHebron04_T2w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-vallHebron04/anat/sub-vallHebron04_space-other_T2w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-vallHebron04/anat/sub-vallHebron04_T2w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-vallHebron04/anat/sub-vallHebron04_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-vallHebron04/anat/sub-vallHebron04_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-vallHebron04/anat/sub-vallHebron04_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-vallHebron04/anat/sub-vallHebron04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-vallHebron04/anat/sub-vallHebron04_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-vallHebron04/anat/sub-vallHebron04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-vallHebron04/anat/sub-vallHebron04_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-vallHebron04/anat/sub-vallHebron04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-vallHebron04/anat/sub-vallHebron04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-vallHebron04/anat/sub-vallHebron04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-vallHebron04/anat/sub-vallHebron04_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-vallHebron04/anat/sub-vallHebron04_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-vallHebron04/anat/sub-vallHebron04_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-vallHebron04/anat/sub-vallHebron04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-vallHebron04/anat/sub-vallHebron04_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-vallHebron04/anat/sub-vallHebron04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-vallHebron04/anat/sub-vallHebron04_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-vallHebron04/anat/sub-vallHebron04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-vallHebron04/anat/sub-vallHebron04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-vallHebron04/anat/sub-vallHebron04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-vallHebron04/anat/sub-vallHebron04_space-other_T2star_label-SC_seg.nii.gz b/derivatives/labels/sub-vallHebron04/anat/sub-vallHebron04_space-other_T2star_label-SC_seg.nii.gz index ca1eeb6ac0..2ee9f7aeea 100644 --- a/derivatives/labels/sub-vallHebron04/anat/sub-vallHebron04_space-other_T2star_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-vallHebron04/anat/sub-vallHebron04_space-other_T2star_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s6943--964d23454f4425467337fa46f23e6339585e0a074d43fa1b5d66221d30d6ab0f.nii.gz +/annex/objects/SHA256E-s28513--73425429d36a5312005061faa6f213b969f899b0d0fc5a6e10dc204aa6d7c47d.nii.gz diff --git a/derivatives/labels/sub-vallHebron04/anat/sub-vallHebron04_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-vallHebron04/anat/sub-vallHebron04_space-other_T2star_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-vallHebron04/anat/sub-vallHebron04_space-other_T2star_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-vallHebron05/anat/sub-vallHebron05_space-other_T1w_label-discs_dlabel.json b/derivatives/labels/sub-vallHebron05/anat/sub-vallHebron05_T1w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-vallHebron05/anat/sub-vallHebron05_space-other_T1w_label-discs_dlabel.json rename to derivatives/labels/sub-vallHebron05/anat/sub-vallHebron05_T1w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-vallHebron05/anat/sub-vallHebron05_space-other_T1w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-vallHebron05/anat/sub-vallHebron05_T1w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-vallHebron05/anat/sub-vallHebron05_space-other_T1w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-vallHebron05/anat/sub-vallHebron05_T1w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-vallHebron05/anat/sub-vallHebron05_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-vallHebron05/anat/sub-vallHebron05_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-vallHebron05/anat/sub-vallHebron05_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-vallHebron05/anat/sub-vallHebron05_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-vallHebron05/anat/sub-vallHebron05_T2star_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-vallHebron05/anat/sub-vallHebron05_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-vallHebron05/anat/sub-vallHebron05_T2star_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-vallHebron05/anat/sub-vallHebron05_space-other_T2w_label-discs_dlabel.json b/derivatives/labels/sub-vallHebron05/anat/sub-vallHebron05_T2w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-vallHebron05/anat/sub-vallHebron05_space-other_T2w_label-discs_dlabel.json rename to derivatives/labels/sub-vallHebron05/anat/sub-vallHebron05_T2w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-vallHebron05/anat/sub-vallHebron05_space-other_T2w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-vallHebron05/anat/sub-vallHebron05_T2w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-vallHebron05/anat/sub-vallHebron05_space-other_T2w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-vallHebron05/anat/sub-vallHebron05_T2w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-vallHebron05/anat/sub-vallHebron05_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-vallHebron05/anat/sub-vallHebron05_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-vallHebron05/anat/sub-vallHebron05_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-vallHebron05/anat/sub-vallHebron05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-vallHebron05/anat/sub-vallHebron05_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-vallHebron05/anat/sub-vallHebron05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-vallHebron05/anat/sub-vallHebron05_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-vallHebron05/anat/sub-vallHebron05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-vallHebron05/anat/sub-vallHebron05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-vallHebron05/anat/sub-vallHebron05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-vallHebron05/anat/sub-vallHebron05_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-vallHebron05/anat/sub-vallHebron05_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-vallHebron05/anat/sub-vallHebron05_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-vallHebron05/anat/sub-vallHebron05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-vallHebron05/anat/sub-vallHebron05_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-vallHebron05/anat/sub-vallHebron05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-vallHebron05/anat/sub-vallHebron05_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-vallHebron05/anat/sub-vallHebron05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-vallHebron05/anat/sub-vallHebron05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-vallHebron05/anat/sub-vallHebron05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - 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derivatives/labels/sub-vallHebron06/anat/sub-vallHebron06_T1w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-vallHebron06/anat/sub-vallHebron06_space-other_T1w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-vallHebron06/anat/sub-vallHebron06_T1w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-vallHebron06/anat/sub-vallHebron06_space-other_T1w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-vallHebron06/anat/sub-vallHebron06_T1w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-vallHebron06/anat/sub-vallHebron06_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-vallHebron06/anat/sub-vallHebron06_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-vallHebron06/anat/sub-vallHebron06_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-vallHebron06/anat/sub-vallHebron06_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-vallHebron06/anat/sub-vallHebron06_T2star_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-vallHebron06/anat/sub-vallHebron06_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-vallHebron06/anat/sub-vallHebron06_T2star_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-vallHebron06/anat/sub-vallHebron06_space-other_T2w_label-discs_dlabel.json b/derivatives/labels/sub-vallHebron06/anat/sub-vallHebron06_T2w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-vallHebron06/anat/sub-vallHebron06_space-other_T2w_label-discs_dlabel.json rename to derivatives/labels/sub-vallHebron06/anat/sub-vallHebron06_T2w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-vallHebron06/anat/sub-vallHebron06_space-other_T2w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-vallHebron06/anat/sub-vallHebron06_T2w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-vallHebron06/anat/sub-vallHebron06_space-other_T2w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-vallHebron06/anat/sub-vallHebron06_T2w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-vallHebron06/anat/sub-vallHebron06_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-vallHebron06/anat/sub-vallHebron06_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-vallHebron06/anat/sub-vallHebron06_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-vallHebron06/anat/sub-vallHebron06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-vallHebron06/anat/sub-vallHebron06_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-vallHebron06/anat/sub-vallHebron06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-vallHebron06/anat/sub-vallHebron06_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-vallHebron06/anat/sub-vallHebron06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-vallHebron06/anat/sub-vallHebron06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-vallHebron06/anat/sub-vallHebron06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-vallHebron06/anat/sub-vallHebron06_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-vallHebron06/anat/sub-vallHebron06_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-vallHebron06/anat/sub-vallHebron06_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-vallHebron06/anat/sub-vallHebron06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-vallHebron06/anat/sub-vallHebron06_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-vallHebron06/anat/sub-vallHebron06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-vallHebron06/anat/sub-vallHebron06_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-vallHebron06/anat/sub-vallHebron06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-vallHebron06/anat/sub-vallHebron06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-vallHebron06/anat/sub-vallHebron06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - 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a/derivatives/labels/sub-vallHebron06/anat/sub-vallHebron06_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-vallHebron06/anat/sub-vallHebron06_space-other_T2star_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-vallHebron06/anat/sub-vallHebron06_space-other_T2star_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-vallHebron07/anat/sub-vallHebron07_space-other_T1w_label-discs_dlabel.json b/derivatives/labels/sub-vallHebron07/anat/sub-vallHebron07_T1w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-vallHebron07/anat/sub-vallHebron07_space-other_T1w_label-discs_dlabel.json rename to derivatives/labels/sub-vallHebron07/anat/sub-vallHebron07_T1w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-vallHebron07/anat/sub-vallHebron07_space-other_T1w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-vallHebron07/anat/sub-vallHebron07_T1w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-vallHebron07/anat/sub-vallHebron07_space-other_T1w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-vallHebron07/anat/sub-vallHebron07_T1w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-vallHebron07/anat/sub-vallHebron07_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-vallHebron07/anat/sub-vallHebron07_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-vallHebron07/anat/sub-vallHebron07_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-vallHebron07/anat/sub-vallHebron07_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-vallHebron07/anat/sub-vallHebron07_T2star_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-vallHebron07/anat/sub-vallHebron07_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-vallHebron07/anat/sub-vallHebron07_T2star_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-vallHebron07/anat/sub-vallHebron07_space-other_T2w_label-discs_dlabel.json b/derivatives/labels/sub-vallHebron07/anat/sub-vallHebron07_T2w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-vallHebron07/anat/sub-vallHebron07_space-other_T2w_label-discs_dlabel.json rename to derivatives/labels/sub-vallHebron07/anat/sub-vallHebron07_T2w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-vallHebron07/anat/sub-vallHebron07_space-other_T2w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-vallHebron07/anat/sub-vallHebron07_T2w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-vallHebron07/anat/sub-vallHebron07_space-other_T2w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-vallHebron07/anat/sub-vallHebron07_T2w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-vallHebron07/anat/sub-vallHebron07_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-vallHebron07/anat/sub-vallHebron07_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-vallHebron07/anat/sub-vallHebron07_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-vallHebron07/anat/sub-vallHebron07_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-vallHebron07/anat/sub-vallHebron07_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-vallHebron07/anat/sub-vallHebron07_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-vallHebron07/anat/sub-vallHebron07_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-vallHebron07/anat/sub-vallHebron07_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-vallHebron07/anat/sub-vallHebron07_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-vallHebron07/anat/sub-vallHebron07_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-vallHebron07/anat/sub-vallHebron07_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-vallHebron07/anat/sub-vallHebron07_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-vallHebron07/anat/sub-vallHebron07_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-vallHebron07/anat/sub-vallHebron07_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-vallHebron07/anat/sub-vallHebron07_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-vallHebron07/anat/sub-vallHebron07_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-vallHebron07/anat/sub-vallHebron07_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-vallHebron07/anat/sub-vallHebron07_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-vallHebron07/anat/sub-vallHebron07_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-vallHebron07/anat/sub-vallHebron07_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-vallHebron07/anat/sub-vallHebron07_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.json b/derivatives/labels/sub-vallHebron07/anat/sub-vallHebron07_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.json new file mode 100644 index 0000000000..e537a137e5 --- /dev/null +++ b/derivatives/labels/sub-vallHebron07/anat/sub-vallHebron07_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.json @@ -0,0 +1,11 @@ +{ + "SpatialReference": { + "Orientation": "RPI", + "Resampling": "1x1x1" + }, + "GeneratedBy": [ + { + "Description": "Manual label of C2 and C5 mid-vertebrae, at the center of the spinal cord." + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-vallHebron07/anat/sub-vallHebron07_space-other_T1w_RPI_r_labels-manual.nii.gz b/derivatives/labels/sub-vallHebron07/anat/sub-vallHebron07_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-vallHebron07/anat/sub-vallHebron07_space-other_T1w_RPI_r_labels-manual.nii.gz rename to derivatives/labels/sub-vallHebron07/anat/sub-vallHebron07_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.nii.gz diff --git a/derivatives/labels/sub-vallHebron07/anat/sub-vallHebron07_space-other_T2star_label-SC_seg.nii.gz b/derivatives/labels/sub-vallHebron07/anat/sub-vallHebron07_space-other_T2star_label-SC_seg.nii.gz index e3925c5deb..c5023db37c 100644 --- a/derivatives/labels/sub-vallHebron07/anat/sub-vallHebron07_space-other_T2star_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-vallHebron07/anat/sub-vallHebron07_space-other_T2star_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s15027--b8992537c60415b5c9f7ddf501d33ed1b64709b94d23d29036b84ee8781fd938.nii.gz +/annex/objects/SHA256E-s15048--7d5a44fe74529002f6c4b58d6a6ff26bb5c6433e6269f87375a3b986780ce093.nii.gz diff --git a/derivatives/labels/sub-vallHebron07/anat/sub-vallHebron07_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-vallHebron07/anat/sub-vallHebron07_space-other_T2star_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-vallHebron07/anat/sub-vallHebron07_space-other_T2star_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-vuiisAchieva01/anat/sub-vuiisAchieva01_space-other_T1w_label-discs_dlabel.json b/derivatives/labels/sub-vuiisAchieva01/anat/sub-vuiisAchieva01_T1w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-vuiisAchieva01/anat/sub-vuiisAchieva01_space-other_T1w_label-discs_dlabel.json rename to derivatives/labels/sub-vuiisAchieva01/anat/sub-vuiisAchieva01_T1w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-vuiisAchieva01/anat/sub-vuiisAchieva01_space-other_T1w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-vuiisAchieva01/anat/sub-vuiisAchieva01_T1w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-vuiisAchieva01/anat/sub-vuiisAchieva01_space-other_T1w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-vuiisAchieva01/anat/sub-vuiisAchieva01_T1w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-vuiisAchieva01/anat/sub-vuiisAchieva01_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-vuiisAchieva01/anat/sub-vuiisAchieva01_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-vuiisAchieva01/anat/sub-vuiisAchieva01_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-vuiisAchieva01/anat/sub-vuiisAchieva01_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-vuiisAchieva01/anat/sub-vuiisAchieva01_T2star_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-vuiisAchieva01/anat/sub-vuiisAchieva01_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-vuiisAchieva01/anat/sub-vuiisAchieva01_T2star_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-vuiisAchieva01/anat/sub-vuiisAchieva01_space-other_T2w_label-discs_dlabel.json b/derivatives/labels/sub-vuiisAchieva01/anat/sub-vuiisAchieva01_T2w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-vuiisAchieva01/anat/sub-vuiisAchieva01_space-other_T2w_label-discs_dlabel.json rename to derivatives/labels/sub-vuiisAchieva01/anat/sub-vuiisAchieva01_T2w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-vuiisAchieva01/anat/sub-vuiisAchieva01_space-other_T2w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-vuiisAchieva01/anat/sub-vuiisAchieva01_T2w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-vuiisAchieva01/anat/sub-vuiisAchieva01_space-other_T2w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-vuiisAchieva01/anat/sub-vuiisAchieva01_T2w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-vuiisAchieva01/anat/sub-vuiisAchieva01_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-vuiisAchieva01/anat/sub-vuiisAchieva01_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-vuiisAchieva01/anat/sub-vuiisAchieva01_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-vuiisAchieva01/anat/sub-vuiisAchieva01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-vuiisAchieva01/anat/sub-vuiisAchieva01_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-vuiisAchieva01/anat/sub-vuiisAchieva01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-vuiisAchieva01/anat/sub-vuiisAchieva01_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-vuiisAchieva01/anat/sub-vuiisAchieva01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-vuiisAchieva01/anat/sub-vuiisAchieva01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-vuiisAchieva01/anat/sub-vuiisAchieva01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-vuiisAchieva01/anat/sub-vuiisAchieva01_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-vuiisAchieva01/anat/sub-vuiisAchieva01_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-vuiisAchieva01/anat/sub-vuiisAchieva01_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-vuiisAchieva01/anat/sub-vuiisAchieva01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-vuiisAchieva01/anat/sub-vuiisAchieva01_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-vuiisAchieva01/anat/sub-vuiisAchieva01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-vuiisAchieva01/anat/sub-vuiisAchieva01_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-vuiisAchieva01/anat/sub-vuiisAchieva01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-vuiisAchieva01/anat/sub-vuiisAchieva01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-vuiisAchieva01/anat/sub-vuiisAchieva01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-vuiisAchieva01/anat/sub-vuiisAchieva01_space-other_T2star_gmlabel-SC_seg.nii.gz b/derivatives/labels/sub-vuiisAchieva01/anat/sub-vuiisAchieva01_space-other_T2star_gmlabel-SC_seg.nii.gz index c2277054f2..7383a78d7f 100644 --- a/derivatives/labels/sub-vuiisAchieva01/anat/sub-vuiisAchieva01_space-other_T2star_gmlabel-SC_seg.nii.gz +++ b/derivatives/labels/sub-vuiisAchieva01/anat/sub-vuiisAchieva01_space-other_T2star_gmlabel-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s55351--81b414444d19da685fb18fe78f07dae10ed4ccfe5990faf18416e74fddcd2f65.nii.gz +/annex/objects/SHA256E-s55373--9b28cc85d0c54f9f901b972a003e9f953e5162a73939f16630e845b1c31e27bd.nii.gz diff --git a/derivatives/labels/sub-vuiisAchieva01/anat/sub-vuiisAchieva01_space-other_T2star_label-SC_seg.nii.gz b/derivatives/labels/sub-vuiisAchieva01/anat/sub-vuiisAchieva01_space-other_T2star_label-SC_seg.nii.gz index 092f8606e1..f86fccdd30 100644 --- a/derivatives/labels/sub-vuiisAchieva01/anat/sub-vuiisAchieva01_space-other_T2star_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-vuiisAchieva01/anat/sub-vuiisAchieva01_space-other_T2star_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s4005--fca50b257034835cfcd66be9a2d292450475db33091db83effa48a3ac085a178.nii.gz +/annex/objects/SHA256E-s15571--ae79fbb8256ec0137b900e498afd45eb979039de2108614dd30c6e188c7abea9.nii.gz diff --git a/derivatives/labels/sub-vuiisAchieva01/anat/sub-vuiisAchieva01_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-vuiisAchieva01/anat/sub-vuiisAchieva01_space-other_T2star_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-vuiisAchieva01/anat/sub-vuiisAchieva01_space-other_T2star_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-vuiisAchieva02/anat/sub-vuiisAchieva02_space-other_T1w_label-discs_dlabel.json b/derivatives/labels/sub-vuiisAchieva02/anat/sub-vuiisAchieva02_T1w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-vuiisAchieva02/anat/sub-vuiisAchieva02_space-other_T1w_label-discs_dlabel.json rename to derivatives/labels/sub-vuiisAchieva02/anat/sub-vuiisAchieva02_T1w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-vuiisAchieva02/anat/sub-vuiisAchieva02_space-other_T1w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-vuiisAchieva02/anat/sub-vuiisAchieva02_T1w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-vuiisAchieva02/anat/sub-vuiisAchieva02_space-other_T1w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-vuiisAchieva02/anat/sub-vuiisAchieva02_T1w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-vuiisAchieva02/anat/sub-vuiisAchieva02_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-vuiisAchieva02/anat/sub-vuiisAchieva02_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-vuiisAchieva02/anat/sub-vuiisAchieva02_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-vuiisAchieva02/anat/sub-vuiisAchieva02_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-vuiisAchieva02/anat/sub-vuiisAchieva02_T2star_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-vuiisAchieva02/anat/sub-vuiisAchieva02_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-vuiisAchieva02/anat/sub-vuiisAchieva02_T2star_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-vuiisAchieva02/anat/sub-vuiisAchieva02_space-other_T2w_label-discs_dlabel.json b/derivatives/labels/sub-vuiisAchieva02/anat/sub-vuiisAchieva02_T2w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-vuiisAchieva02/anat/sub-vuiisAchieva02_space-other_T2w_label-discs_dlabel.json rename to derivatives/labels/sub-vuiisAchieva02/anat/sub-vuiisAchieva02_T2w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-vuiisAchieva02/anat/sub-vuiisAchieva02_space-other_T2w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-vuiisAchieva02/anat/sub-vuiisAchieva02_T2w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-vuiisAchieva02/anat/sub-vuiisAchieva02_space-other_T2w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-vuiisAchieva02/anat/sub-vuiisAchieva02_T2w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-vuiisAchieva02/anat/sub-vuiisAchieva02_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-vuiisAchieva02/anat/sub-vuiisAchieva02_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-vuiisAchieva02/anat/sub-vuiisAchieva02_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-vuiisAchieva02/anat/sub-vuiisAchieva02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-vuiisAchieva02/anat/sub-vuiisAchieva02_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-vuiisAchieva02/anat/sub-vuiisAchieva02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-vuiisAchieva02/anat/sub-vuiisAchieva02_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-vuiisAchieva02/anat/sub-vuiisAchieva02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-vuiisAchieva02/anat/sub-vuiisAchieva02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-vuiisAchieva02/anat/sub-vuiisAchieva02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-vuiisAchieva02/anat/sub-vuiisAchieva02_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-vuiisAchieva02/anat/sub-vuiisAchieva02_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-vuiisAchieva02/anat/sub-vuiisAchieva02_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-vuiisAchieva02/anat/sub-vuiisAchieva02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-vuiisAchieva02/anat/sub-vuiisAchieva02_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-vuiisAchieva02/anat/sub-vuiisAchieva02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-vuiisAchieva02/anat/sub-vuiisAchieva02_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-vuiisAchieva02/anat/sub-vuiisAchieva02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-vuiisAchieva02/anat/sub-vuiisAchieva02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-vuiisAchieva02/anat/sub-vuiisAchieva02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-vuiisAchieva02/anat/sub-vuiisAchieva02_space-other_T2star_label-SC_seg.nii.gz b/derivatives/labels/sub-vuiisAchieva02/anat/sub-vuiisAchieva02_space-other_T2star_label-SC_seg.nii.gz index 1bdcecaeb5..f3423217d2 100644 --- a/derivatives/labels/sub-vuiisAchieva02/anat/sub-vuiisAchieva02_space-other_T2star_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-vuiisAchieva02/anat/sub-vuiisAchieva02_space-other_T2star_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s8225--a128dae932848283e988f40713d93caac41bf025f0dcafaf73cd1cd822eff3f9.nii.gz +/annex/objects/SHA256E-s8246--192b83bd2815d3a4b6c80c5c75d065bd1e9f43bcebdfac1547f6348c0329aa02.nii.gz diff --git a/derivatives/labels/sub-vuiisAchieva02/anat/sub-vuiisAchieva02_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-vuiisAchieva02/anat/sub-vuiisAchieva02_space-other_T2star_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-vuiisAchieva02/anat/sub-vuiisAchieva02_space-other_T2star_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-vuiisAchieva03/anat/sub-vuiisAchieva03_space-other_T1w_label-discs_dlabel.json b/derivatives/labels/sub-vuiisAchieva03/anat/sub-vuiisAchieva03_T1w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-vuiisAchieva03/anat/sub-vuiisAchieva03_space-other_T1w_label-discs_dlabel.json rename to derivatives/labels/sub-vuiisAchieva03/anat/sub-vuiisAchieva03_T1w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-vuiisAchieva03/anat/sub-vuiisAchieva03_space-other_T1w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-vuiisAchieva03/anat/sub-vuiisAchieva03_T1w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-vuiisAchieva03/anat/sub-vuiisAchieva03_space-other_T1w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-vuiisAchieva03/anat/sub-vuiisAchieva03_T1w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-vuiisAchieva03/anat/sub-vuiisAchieva03_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-vuiisAchieva03/anat/sub-vuiisAchieva03_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-vuiisAchieva03/anat/sub-vuiisAchieva03_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-vuiisAchieva03/anat/sub-vuiisAchieva03_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-vuiisAchieva03/anat/sub-vuiisAchieva03_T2star_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-vuiisAchieva03/anat/sub-vuiisAchieva03_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-vuiisAchieva03/anat/sub-vuiisAchieva03_T2star_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-vuiisAchieva03/anat/sub-vuiisAchieva03_space-other_T2w_label-discs_dlabel.json b/derivatives/labels/sub-vuiisAchieva03/anat/sub-vuiisAchieva03_T2w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-vuiisAchieva03/anat/sub-vuiisAchieva03_space-other_T2w_label-discs_dlabel.json rename to derivatives/labels/sub-vuiisAchieva03/anat/sub-vuiisAchieva03_T2w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-vuiisAchieva03/anat/sub-vuiisAchieva03_space-other_T2w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-vuiisAchieva03/anat/sub-vuiisAchieva03_T2w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-vuiisAchieva03/anat/sub-vuiisAchieva03_space-other_T2w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-vuiisAchieva03/anat/sub-vuiisAchieva03_T2w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-vuiisAchieva03/anat/sub-vuiisAchieva03_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-vuiisAchieva03/anat/sub-vuiisAchieva03_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-vuiisAchieva03/anat/sub-vuiisAchieva03_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-vuiisAchieva03/anat/sub-vuiisAchieva03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-vuiisAchieva03/anat/sub-vuiisAchieva03_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-vuiisAchieva03/anat/sub-vuiisAchieva03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-vuiisAchieva03/anat/sub-vuiisAchieva03_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-vuiisAchieva03/anat/sub-vuiisAchieva03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-vuiisAchieva03/anat/sub-vuiisAchieva03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-vuiisAchieva03/anat/sub-vuiisAchieva03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-vuiisAchieva03/anat/sub-vuiisAchieva03_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-vuiisAchieva03/anat/sub-vuiisAchieva03_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-vuiisAchieva03/anat/sub-vuiisAchieva03_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-vuiisAchieva03/anat/sub-vuiisAchieva03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-vuiisAchieva03/anat/sub-vuiisAchieva03_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-vuiisAchieva03/anat/sub-vuiisAchieva03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-vuiisAchieva03/anat/sub-vuiisAchieva03_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-vuiisAchieva03/anat/sub-vuiisAchieva03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-vuiisAchieva03/anat/sub-vuiisAchieva03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-vuiisAchieva03/anat/sub-vuiisAchieva03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-vuiisAchieva03/anat/sub-vuiisAchieva03_space-other_T2star_label-SC_seg.nii.gz b/derivatives/labels/sub-vuiisAchieva03/anat/sub-vuiisAchieva03_space-other_T2star_label-SC_seg.nii.gz index 915abcaa3d..728d840e14 100644 --- a/derivatives/labels/sub-vuiisAchieva03/anat/sub-vuiisAchieva03_space-other_T2star_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-vuiisAchieva03/anat/sub-vuiisAchieva03_space-other_T2star_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s8257--211dcddcad3e5427be22f5ce56d28b49a5d16af8acca8772c6a4d91623064f4d.nii.gz +/annex/objects/SHA256E-s8278--5782b7483b98409ddf16649656054a7775bac9795b643c799eb89e964879a79a.nii.gz diff --git a/derivatives/labels/sub-vuiisAchieva03/anat/sub-vuiisAchieva03_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-vuiisAchieva03/anat/sub-vuiisAchieva03_space-other_T2star_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-vuiisAchieva03/anat/sub-vuiisAchieva03_space-other_T2star_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-vuiisAchieva04/anat/sub-vuiisAchieva04_space-other_T1w_label-discs_dlabel.json b/derivatives/labels/sub-vuiisAchieva04/anat/sub-vuiisAchieva04_T1w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-vuiisAchieva04/anat/sub-vuiisAchieva04_space-other_T1w_label-discs_dlabel.json rename to derivatives/labels/sub-vuiisAchieva04/anat/sub-vuiisAchieva04_T1w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-vuiisAchieva04/anat/sub-vuiisAchieva04_space-other_T1w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-vuiisAchieva04/anat/sub-vuiisAchieva04_T1w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-vuiisAchieva04/anat/sub-vuiisAchieva04_space-other_T1w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-vuiisAchieva04/anat/sub-vuiisAchieva04_T1w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-vuiisAchieva04/anat/sub-vuiisAchieva04_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-vuiisAchieva04/anat/sub-vuiisAchieva04_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-vuiisAchieva04/anat/sub-vuiisAchieva04_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-vuiisAchieva04/anat/sub-vuiisAchieva04_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-vuiisAchieva04/anat/sub-vuiisAchieva04_T2star_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-vuiisAchieva04/anat/sub-vuiisAchieva04_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-vuiisAchieva04/anat/sub-vuiisAchieva04_T2star_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-vuiisAchieva04/anat/sub-vuiisAchieva04_space-other_T2w_label-discs_dlabel.json b/derivatives/labels/sub-vuiisAchieva04/anat/sub-vuiisAchieva04_T2w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-vuiisAchieva04/anat/sub-vuiisAchieva04_space-other_T2w_label-discs_dlabel.json rename to derivatives/labels/sub-vuiisAchieva04/anat/sub-vuiisAchieva04_T2w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-vuiisAchieva04/anat/sub-vuiisAchieva04_space-other_T2w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-vuiisAchieva04/anat/sub-vuiisAchieva04_T2w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-vuiisAchieva04/anat/sub-vuiisAchieva04_space-other_T2w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-vuiisAchieva04/anat/sub-vuiisAchieva04_T2w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-vuiisAchieva04/anat/sub-vuiisAchieva04_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-vuiisAchieva04/anat/sub-vuiisAchieva04_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-vuiisAchieva04/anat/sub-vuiisAchieva04_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-vuiisAchieva04/anat/sub-vuiisAchieva04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-vuiisAchieva04/anat/sub-vuiisAchieva04_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-vuiisAchieva04/anat/sub-vuiisAchieva04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-vuiisAchieva04/anat/sub-vuiisAchieva04_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-vuiisAchieva04/anat/sub-vuiisAchieva04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-vuiisAchieva04/anat/sub-vuiisAchieva04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-vuiisAchieva04/anat/sub-vuiisAchieva04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-vuiisAchieva04/anat/sub-vuiisAchieva04_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-vuiisAchieva04/anat/sub-vuiisAchieva04_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-vuiisAchieva04/anat/sub-vuiisAchieva04_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-vuiisAchieva04/anat/sub-vuiisAchieva04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-vuiisAchieva04/anat/sub-vuiisAchieva04_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-vuiisAchieva04/anat/sub-vuiisAchieva04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-vuiisAchieva04/anat/sub-vuiisAchieva04_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-vuiisAchieva04/anat/sub-vuiisAchieva04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-vuiisAchieva04/anat/sub-vuiisAchieva04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-vuiisAchieva04/anat/sub-vuiisAchieva04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-vuiisAchieva04/anat/sub-vuiisAchieva04_space-other_T2star_label-SC_seg.nii.gz b/derivatives/labels/sub-vuiisAchieva04/anat/sub-vuiisAchieva04_space-other_T2star_label-SC_seg.nii.gz index 445893f566..c0970ba991 100644 --- a/derivatives/labels/sub-vuiisAchieva04/anat/sub-vuiisAchieva04_space-other_T2star_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-vuiisAchieva04/anat/sub-vuiisAchieva04_space-other_T2star_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s8236--8ae3694123fc6e154cc31df56898c8d217c5aab8378dcb0d27f8c99b09d5c939.nii.gz +/annex/objects/SHA256E-s8257--37aa3bb5e7f7c6e4fd5e64d38b2844a4db8ff6fd9247b1e7df24d55fa5f413cb.nii.gz diff --git a/derivatives/labels/sub-vuiisAchieva04/anat/sub-vuiisAchieva04_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-vuiisAchieva04/anat/sub-vuiisAchieva04_space-other_T2star_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-vuiisAchieva04/anat/sub-vuiisAchieva04_space-other_T2star_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-vuiisAchieva05/anat/sub-vuiisAchieva05_space-other_T1w_label-discs_dlabel.json b/derivatives/labels/sub-vuiisAchieva05/anat/sub-vuiisAchieva05_T1w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-vuiisAchieva05/anat/sub-vuiisAchieva05_space-other_T1w_label-discs_dlabel.json rename to derivatives/labels/sub-vuiisAchieva05/anat/sub-vuiisAchieva05_T1w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-vuiisAchieva05/anat/sub-vuiisAchieva05_space-other_T1w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-vuiisAchieva05/anat/sub-vuiisAchieva05_T1w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-vuiisAchieva05/anat/sub-vuiisAchieva05_space-other_T1w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-vuiisAchieva05/anat/sub-vuiisAchieva05_T1w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-vuiisAchieva05/anat/sub-vuiisAchieva05_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-vuiisAchieva05/anat/sub-vuiisAchieva05_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-vuiisAchieva05/anat/sub-vuiisAchieva05_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-vuiisAchieva05/anat/sub-vuiisAchieva05_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-vuiisAchieva05/anat/sub-vuiisAchieva05_T2star_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-vuiisAchieva05/anat/sub-vuiisAchieva05_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-vuiisAchieva05/anat/sub-vuiisAchieva05_T2star_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-vuiisAchieva05/anat/sub-vuiisAchieva05_space-other_T2w_label-discs_dlabel.json b/derivatives/labels/sub-vuiisAchieva05/anat/sub-vuiisAchieva05_T2w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-vuiisAchieva05/anat/sub-vuiisAchieva05_space-other_T2w_label-discs_dlabel.json rename to derivatives/labels/sub-vuiisAchieva05/anat/sub-vuiisAchieva05_T2w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-vuiisAchieva05/anat/sub-vuiisAchieva05_space-other_T2w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-vuiisAchieva05/anat/sub-vuiisAchieva05_T2w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-vuiisAchieva05/anat/sub-vuiisAchieva05_space-other_T2w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-vuiisAchieva05/anat/sub-vuiisAchieva05_T2w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-vuiisAchieva05/anat/sub-vuiisAchieva05_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-vuiisAchieva05/anat/sub-vuiisAchieva05_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-vuiisAchieva05/anat/sub-vuiisAchieva05_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-vuiisAchieva05/anat/sub-vuiisAchieva05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-vuiisAchieva05/anat/sub-vuiisAchieva05_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-vuiisAchieva05/anat/sub-vuiisAchieva05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-vuiisAchieva05/anat/sub-vuiisAchieva05_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-vuiisAchieva05/anat/sub-vuiisAchieva05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-vuiisAchieva05/anat/sub-vuiisAchieva05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-vuiisAchieva05/anat/sub-vuiisAchieva05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-vuiisAchieva05/anat/sub-vuiisAchieva05_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-vuiisAchieva05/anat/sub-vuiisAchieva05_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-vuiisAchieva05/anat/sub-vuiisAchieva05_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-vuiisAchieva05/anat/sub-vuiisAchieva05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-vuiisAchieva05/anat/sub-vuiisAchieva05_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-vuiisAchieva05/anat/sub-vuiisAchieva05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-vuiisAchieva05/anat/sub-vuiisAchieva05_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-vuiisAchieva05/anat/sub-vuiisAchieva05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-vuiisAchieva05/anat/sub-vuiisAchieva05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-vuiisAchieva05/anat/sub-vuiisAchieva05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-vuiisAchieva05/anat/sub-vuiisAchieva05_space-other_T2star_label-SC_seg.nii.gz b/derivatives/labels/sub-vuiisAchieva05/anat/sub-vuiisAchieva05_space-other_T2star_label-SC_seg.nii.gz index b23e941d0b..3ab38b9590 100644 --- a/derivatives/labels/sub-vuiisAchieva05/anat/sub-vuiisAchieva05_space-other_T2star_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-vuiisAchieva05/anat/sub-vuiisAchieva05_space-other_T2star_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s8271--b4974643678915d009ac5f704f7297092a422b0119f0ba771e08cdb07577bd22.nii.gz +/annex/objects/SHA256E-s8292--89dae3ddfd9e988db06740fb295c05eef40027859f6536a2e8966b1bc825d542.nii.gz diff --git a/derivatives/labels/sub-vuiisAchieva05/anat/sub-vuiisAchieva05_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-vuiisAchieva05/anat/sub-vuiisAchieva05_space-other_T2star_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-vuiisAchieva05/anat/sub-vuiisAchieva05_space-other_T2star_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-vuiisAchieva06/anat/sub-vuiisAchieva06_space-other_T1w_label-discs_dlabel.json b/derivatives/labels/sub-vuiisAchieva06/anat/sub-vuiisAchieva06_T1w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-vuiisAchieva06/anat/sub-vuiisAchieva06_space-other_T1w_label-discs_dlabel.json rename to derivatives/labels/sub-vuiisAchieva06/anat/sub-vuiisAchieva06_T1w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-vuiisAchieva06/anat/sub-vuiisAchieva06_space-other_T1w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-vuiisAchieva06/anat/sub-vuiisAchieva06_T1w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-vuiisAchieva06/anat/sub-vuiisAchieva06_space-other_T1w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-vuiisAchieva06/anat/sub-vuiisAchieva06_T1w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-vuiisAchieva06/anat/sub-vuiisAchieva06_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-vuiisAchieva06/anat/sub-vuiisAchieva06_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-vuiisAchieva06/anat/sub-vuiisAchieva06_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-vuiisAchieva06/anat/sub-vuiisAchieva06_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-vuiisAchieva06/anat/sub-vuiisAchieva06_T2star_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-vuiisAchieva06/anat/sub-vuiisAchieva06_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-vuiisAchieva06/anat/sub-vuiisAchieva06_T2star_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-vuiisAchieva06/anat/sub-vuiisAchieva06_space-other_T2w_label-discs_dlabel.json b/derivatives/labels/sub-vuiisAchieva06/anat/sub-vuiisAchieva06_T2w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-vuiisAchieva06/anat/sub-vuiisAchieva06_space-other_T2w_label-discs_dlabel.json rename to derivatives/labels/sub-vuiisAchieva06/anat/sub-vuiisAchieva06_T2w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-vuiisAchieva06/anat/sub-vuiisAchieva06_space-other_T2w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-vuiisAchieva06/anat/sub-vuiisAchieva06_T2w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-vuiisAchieva06/anat/sub-vuiisAchieva06_space-other_T2w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-vuiisAchieva06/anat/sub-vuiisAchieva06_T2w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-vuiisAchieva06/anat/sub-vuiisAchieva06_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-vuiisAchieva06/anat/sub-vuiisAchieva06_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-vuiisAchieva06/anat/sub-vuiisAchieva06_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-vuiisAchieva06/anat/sub-vuiisAchieva06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-vuiisAchieva06/anat/sub-vuiisAchieva06_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-vuiisAchieva06/anat/sub-vuiisAchieva06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-vuiisAchieva06/anat/sub-vuiisAchieva06_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-vuiisAchieva06/anat/sub-vuiisAchieva06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-vuiisAchieva06/anat/sub-vuiisAchieva06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-vuiisAchieva06/anat/sub-vuiisAchieva06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-vuiisAchieva06/anat/sub-vuiisAchieva06_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-vuiisAchieva06/anat/sub-vuiisAchieva06_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-vuiisAchieva06/anat/sub-vuiisAchieva06_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-vuiisAchieva06/anat/sub-vuiisAchieva06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-vuiisAchieva06/anat/sub-vuiisAchieva06_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-vuiisAchieva06/anat/sub-vuiisAchieva06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-vuiisAchieva06/anat/sub-vuiisAchieva06_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-vuiisAchieva06/anat/sub-vuiisAchieva06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-vuiisAchieva06/anat/sub-vuiisAchieva06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-vuiisAchieva06/anat/sub-vuiisAchieva06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-vuiisAchieva06/anat/sub-vuiisAchieva06_space-other_T2star_label-SC_seg.nii.gz b/derivatives/labels/sub-vuiisAchieva06/anat/sub-vuiisAchieva06_space-other_T2star_label-SC_seg.nii.gz index afe64ab8e3..f4277e9061 100644 --- a/derivatives/labels/sub-vuiisAchieva06/anat/sub-vuiisAchieva06_space-other_T2star_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-vuiisAchieva06/anat/sub-vuiisAchieva06_space-other_T2star_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s8334--14644a68251cece142e30193942bc8215a11990f729644496e7a1bcdc3eb80e3.nii.gz +/annex/objects/SHA256E-s8355--4e936544e3efbb867bf1440ae75d1540fe74717316604ef107d801a5cda1501f.nii.gz diff --git a/derivatives/labels/sub-vuiisAchieva06/anat/sub-vuiisAchieva06_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-vuiisAchieva06/anat/sub-vuiisAchieva06_space-other_T2star_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-vuiisAchieva06/anat/sub-vuiisAchieva06_space-other_T2star_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-vuiisIngenia01/anat/sub-vuiisIngenia01_space-other_T1w_label-discs_dlabel.json b/derivatives/labels/sub-vuiisIngenia01/anat/sub-vuiisIngenia01_T1w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-vuiisIngenia01/anat/sub-vuiisIngenia01_space-other_T1w_label-discs_dlabel.json rename to derivatives/labels/sub-vuiisIngenia01/anat/sub-vuiisIngenia01_T1w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-vuiisIngenia01/anat/sub-vuiisIngenia01_space-other_T1w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-vuiisIngenia01/anat/sub-vuiisIngenia01_T1w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-vuiisIngenia01/anat/sub-vuiisIngenia01_space-other_T1w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-vuiisIngenia01/anat/sub-vuiisIngenia01_T1w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-vuiisIngenia01/anat/sub-vuiisIngenia01_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-vuiisIngenia01/anat/sub-vuiisIngenia01_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-vuiisIngenia01/anat/sub-vuiisIngenia01_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-vuiisIngenia01/anat/sub-vuiisIngenia01_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-vuiisIngenia01/anat/sub-vuiisIngenia01_T2star_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-vuiisIngenia01/anat/sub-vuiisIngenia01_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-vuiisIngenia01/anat/sub-vuiisIngenia01_T2star_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-vuiisIngenia01/anat/sub-vuiisIngenia01_space-other_T2w_label-discs_dlabel.json b/derivatives/labels/sub-vuiisIngenia01/anat/sub-vuiisIngenia01_T2w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-vuiisIngenia01/anat/sub-vuiisIngenia01_space-other_T2w_label-discs_dlabel.json rename to derivatives/labels/sub-vuiisIngenia01/anat/sub-vuiisIngenia01_T2w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-vuiisIngenia01/anat/sub-vuiisIngenia01_space-other_T2w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-vuiisIngenia01/anat/sub-vuiisIngenia01_T2w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-vuiisIngenia01/anat/sub-vuiisIngenia01_space-other_T2w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-vuiisIngenia01/anat/sub-vuiisIngenia01_T2w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-vuiisIngenia01/anat/sub-vuiisIngenia01_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-vuiisIngenia01/anat/sub-vuiisIngenia01_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-vuiisIngenia01/anat/sub-vuiisIngenia01_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-vuiisIngenia01/anat/sub-vuiisIngenia01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-vuiisIngenia01/anat/sub-vuiisIngenia01_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-vuiisIngenia01/anat/sub-vuiisIngenia01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-vuiisIngenia01/anat/sub-vuiisIngenia01_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-vuiisIngenia01/anat/sub-vuiisIngenia01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-vuiisIngenia01/anat/sub-vuiisIngenia01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-vuiisIngenia01/anat/sub-vuiisIngenia01_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-vuiisIngenia01/anat/sub-vuiisIngenia01_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-vuiisIngenia01/anat/sub-vuiisIngenia01_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-vuiisIngenia01/anat/sub-vuiisIngenia01_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-vuiisIngenia01/anat/sub-vuiisIngenia01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-vuiisIngenia01/anat/sub-vuiisIngenia01_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-vuiisIngenia01/anat/sub-vuiisIngenia01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-vuiisIngenia01/anat/sub-vuiisIngenia01_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-vuiisIngenia01/anat/sub-vuiisIngenia01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-vuiisIngenia01/anat/sub-vuiisIngenia01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-vuiisIngenia01/anat/sub-vuiisIngenia01_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-vuiisIngenia01/anat/sub-vuiisIngenia01_space-other_T2star_label-SC_seg.nii.gz b/derivatives/labels/sub-vuiisIngenia01/anat/sub-vuiisIngenia01_space-other_T2star_label-SC_seg.nii.gz index dfd774311f..cd2cb45fce 100644 --- a/derivatives/labels/sub-vuiisIngenia01/anat/sub-vuiisIngenia01_space-other_T2star_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-vuiisIngenia01/anat/sub-vuiisIngenia01_space-other_T2star_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s8453--893ec1bbb57de3b5bc612733a17590994281e873ac1e2df3bdf99c115765b7db.nii.gz +/annex/objects/SHA256E-s8474--3f5256541146a981cb0a264fa055abf033ab1f289beecd01b658c7356f7663b1.nii.gz diff --git a/derivatives/labels/sub-vuiisIngenia01/anat/sub-vuiisIngenia01_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-vuiisIngenia01/anat/sub-vuiisIngenia01_space-other_T2star_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-vuiisIngenia01/anat/sub-vuiisIngenia01_space-other_T2star_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-vuiisIngenia02/anat/sub-vuiisIngenia02_space-other_T1w_label-discs_dlabel.json b/derivatives/labels/sub-vuiisIngenia02/anat/sub-vuiisIngenia02_T1w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-vuiisIngenia02/anat/sub-vuiisIngenia02_space-other_T1w_label-discs_dlabel.json rename to derivatives/labels/sub-vuiisIngenia02/anat/sub-vuiisIngenia02_T1w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-vuiisIngenia02/anat/sub-vuiisIngenia02_space-other_T1w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-vuiisIngenia02/anat/sub-vuiisIngenia02_T1w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-vuiisIngenia02/anat/sub-vuiisIngenia02_space-other_T1w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-vuiisIngenia02/anat/sub-vuiisIngenia02_T1w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-vuiisIngenia02/anat/sub-vuiisIngenia02_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-vuiisIngenia02/anat/sub-vuiisIngenia02_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-vuiisIngenia02/anat/sub-vuiisIngenia02_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-vuiisIngenia02/anat/sub-vuiisIngenia02_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-vuiisIngenia02/anat/sub-vuiisIngenia02_T2star_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-vuiisIngenia02/anat/sub-vuiisIngenia02_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-vuiisIngenia02/anat/sub-vuiisIngenia02_T2star_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-vuiisIngenia02/anat/sub-vuiisIngenia02_space-other_T2w_label-discs_dlabel.json b/derivatives/labels/sub-vuiisIngenia02/anat/sub-vuiisIngenia02_T2w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-vuiisIngenia02/anat/sub-vuiisIngenia02_space-other_T2w_label-discs_dlabel.json rename to derivatives/labels/sub-vuiisIngenia02/anat/sub-vuiisIngenia02_T2w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-vuiisIngenia02/anat/sub-vuiisIngenia02_space-other_T2w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-vuiisIngenia02/anat/sub-vuiisIngenia02_T2w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-vuiisIngenia02/anat/sub-vuiisIngenia02_space-other_T2w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-vuiisIngenia02/anat/sub-vuiisIngenia02_T2w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-vuiisIngenia02/anat/sub-vuiisIngenia02_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-vuiisIngenia02/anat/sub-vuiisIngenia02_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-vuiisIngenia02/anat/sub-vuiisIngenia02_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-vuiisIngenia02/anat/sub-vuiisIngenia02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-vuiisIngenia02/anat/sub-vuiisIngenia02_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-vuiisIngenia02/anat/sub-vuiisIngenia02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-vuiisIngenia02/anat/sub-vuiisIngenia02_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-vuiisIngenia02/anat/sub-vuiisIngenia02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-vuiisIngenia02/anat/sub-vuiisIngenia02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-vuiisIngenia02/anat/sub-vuiisIngenia02_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-vuiisIngenia02/anat/sub-vuiisIngenia02_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-vuiisIngenia02/anat/sub-vuiisIngenia02_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-vuiisIngenia02/anat/sub-vuiisIngenia02_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-vuiisIngenia02/anat/sub-vuiisIngenia02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-vuiisIngenia02/anat/sub-vuiisIngenia02_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-vuiisIngenia02/anat/sub-vuiisIngenia02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-vuiisIngenia02/anat/sub-vuiisIngenia02_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-vuiisIngenia02/anat/sub-vuiisIngenia02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-vuiisIngenia02/anat/sub-vuiisIngenia02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-vuiisIngenia02/anat/sub-vuiisIngenia02_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-vuiisIngenia02/anat/sub-vuiisIngenia02_space-other_T2star_label-SC_seg.nii.gz b/derivatives/labels/sub-vuiisIngenia02/anat/sub-vuiisIngenia02_space-other_T2star_label-SC_seg.nii.gz index 7fa678f7a2..98c374d4ea 100644 --- a/derivatives/labels/sub-vuiisIngenia02/anat/sub-vuiisIngenia02_space-other_T2star_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-vuiisIngenia02/anat/sub-vuiisIngenia02_space-other_T2star_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s8319--5b34b146075df3d8c21e4165b70afbc4a430d5b68572655d4d6ff349004960d0.nii.gz +/annex/objects/SHA256E-s8340--6eefb52c8421bcf0744b1f8a9652361978a6657e4481c541b9386c1639894bea.nii.gz diff --git a/derivatives/labels/sub-vuiisIngenia02/anat/sub-vuiisIngenia02_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-vuiisIngenia02/anat/sub-vuiisIngenia02_space-other_T2star_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-vuiisIngenia02/anat/sub-vuiisIngenia02_space-other_T2star_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-vuiisIngenia03/anat/sub-vuiisIngenia03_space-other_T1w_label-discs_dlabel.json b/derivatives/labels/sub-vuiisIngenia03/anat/sub-vuiisIngenia03_T1w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-vuiisIngenia03/anat/sub-vuiisIngenia03_space-other_T1w_label-discs_dlabel.json rename to derivatives/labels/sub-vuiisIngenia03/anat/sub-vuiisIngenia03_T1w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-vuiisIngenia03/anat/sub-vuiisIngenia03_space-other_T1w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-vuiisIngenia03/anat/sub-vuiisIngenia03_T1w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-vuiisIngenia03/anat/sub-vuiisIngenia03_space-other_T1w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-vuiisIngenia03/anat/sub-vuiisIngenia03_T1w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-vuiisIngenia03/anat/sub-vuiisIngenia03_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-vuiisIngenia03/anat/sub-vuiisIngenia03_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-vuiisIngenia03/anat/sub-vuiisIngenia03_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-vuiisIngenia03/anat/sub-vuiisIngenia03_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-vuiisIngenia03/anat/sub-vuiisIngenia03_T2star_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-vuiisIngenia03/anat/sub-vuiisIngenia03_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-vuiisIngenia03/anat/sub-vuiisIngenia03_T2star_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-vuiisIngenia03/anat/sub-vuiisIngenia03_space-other_T2w_label-discs_dlabel.json b/derivatives/labels/sub-vuiisIngenia03/anat/sub-vuiisIngenia03_T2w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-vuiisIngenia03/anat/sub-vuiisIngenia03_space-other_T2w_label-discs_dlabel.json rename to derivatives/labels/sub-vuiisIngenia03/anat/sub-vuiisIngenia03_T2w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-vuiisIngenia03/anat/sub-vuiisIngenia03_space-other_T2w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-vuiisIngenia03/anat/sub-vuiisIngenia03_T2w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-vuiisIngenia03/anat/sub-vuiisIngenia03_space-other_T2w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-vuiisIngenia03/anat/sub-vuiisIngenia03_T2w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-vuiisIngenia03/anat/sub-vuiisIngenia03_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-vuiisIngenia03/anat/sub-vuiisIngenia03_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-vuiisIngenia03/anat/sub-vuiisIngenia03_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-vuiisIngenia03/anat/sub-vuiisIngenia03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-vuiisIngenia03/anat/sub-vuiisIngenia03_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-vuiisIngenia03/anat/sub-vuiisIngenia03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-vuiisIngenia03/anat/sub-vuiisIngenia03_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-vuiisIngenia03/anat/sub-vuiisIngenia03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-vuiisIngenia03/anat/sub-vuiisIngenia03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-vuiisIngenia03/anat/sub-vuiisIngenia03_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-vuiisIngenia03/anat/sub-vuiisIngenia03_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-vuiisIngenia03/anat/sub-vuiisIngenia03_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-vuiisIngenia03/anat/sub-vuiisIngenia03_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-vuiisIngenia03/anat/sub-vuiisIngenia03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-vuiisIngenia03/anat/sub-vuiisIngenia03_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-vuiisIngenia03/anat/sub-vuiisIngenia03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-vuiisIngenia03/anat/sub-vuiisIngenia03_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-vuiisIngenia03/anat/sub-vuiisIngenia03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-vuiisIngenia03/anat/sub-vuiisIngenia03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-vuiisIngenia03/anat/sub-vuiisIngenia03_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-vuiisIngenia03/anat/sub-vuiisIngenia03_space-other_T2star_gmlabel-SC_seg.nii.gz b/derivatives/labels/sub-vuiisIngenia03/anat/sub-vuiisIngenia03_space-other_T2star_gmlabel-SC_seg.nii.gz index 5d8359ad48..f6e064f274 100644 --- a/derivatives/labels/sub-vuiisIngenia03/anat/sub-vuiisIngenia03_space-other_T2star_gmlabel-SC_seg.nii.gz +++ b/derivatives/labels/sub-vuiisIngenia03/anat/sub-vuiisIngenia03_space-other_T2star_gmlabel-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s55467--097f63039350ed5534a66ffd57d4eeeb7c36bc2d0d95668edb01968aff92a821.nii.gz +/annex/objects/SHA256E-s55477--401171448c5f472b4bbc9837295fd8d1338b1122e1f41300e1fddeb956f062b3.nii.gz diff --git a/derivatives/labels/sub-vuiisIngenia03/anat/sub-vuiisIngenia03_space-other_T2star_label-SC_seg.nii.gz b/derivatives/labels/sub-vuiisIngenia03/anat/sub-vuiisIngenia03_space-other_T2star_label-SC_seg.nii.gz index 591e10cef1..7ccae79c98 100644 --- a/derivatives/labels/sub-vuiisIngenia03/anat/sub-vuiisIngenia03_space-other_T2star_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-vuiisIngenia03/anat/sub-vuiisIngenia03_space-other_T2star_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s8231--d98bc0671e62994453619fb3611e1abe9d9e44a047412308291d8f67a55cbfed.nii.gz +/annex/objects/SHA256E-s8252--ff2a78de1af70cb841b8561ef6ec9422d6e8eae1149e369119b02e36bade29f9.nii.gz diff --git a/derivatives/labels/sub-vuiisIngenia03/anat/sub-vuiisIngenia03_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-vuiisIngenia03/anat/sub-vuiisIngenia03_space-other_T2star_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-vuiisIngenia03/anat/sub-vuiisIngenia03_space-other_T2star_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-vuiisIngenia04/anat/sub-vuiisIngenia04_space-other_T1w_label-discs_dlabel.json b/derivatives/labels/sub-vuiisIngenia04/anat/sub-vuiisIngenia04_T1w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-vuiisIngenia04/anat/sub-vuiisIngenia04_space-other_T1w_label-discs_dlabel.json rename to derivatives/labels/sub-vuiisIngenia04/anat/sub-vuiisIngenia04_T1w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-vuiisIngenia04/anat/sub-vuiisIngenia04_space-other_T1w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-vuiisIngenia04/anat/sub-vuiisIngenia04_T1w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-vuiisIngenia04/anat/sub-vuiisIngenia04_space-other_T1w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-vuiisIngenia04/anat/sub-vuiisIngenia04_T1w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-vuiisIngenia04/anat/sub-vuiisIngenia04_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-vuiisIngenia04/anat/sub-vuiisIngenia04_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-vuiisIngenia04/anat/sub-vuiisIngenia04_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-vuiisIngenia04/anat/sub-vuiisIngenia04_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-vuiisIngenia04/anat/sub-vuiisIngenia04_T2star_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-vuiisIngenia04/anat/sub-vuiisIngenia04_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-vuiisIngenia04/anat/sub-vuiisIngenia04_T2star_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-vuiisIngenia04/anat/sub-vuiisIngenia04_space-other_T2w_label-discs_dlabel.json b/derivatives/labels/sub-vuiisIngenia04/anat/sub-vuiisIngenia04_T2w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-vuiisIngenia04/anat/sub-vuiisIngenia04_space-other_T2w_label-discs_dlabel.json rename to derivatives/labels/sub-vuiisIngenia04/anat/sub-vuiisIngenia04_T2w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-vuiisIngenia04/anat/sub-vuiisIngenia04_space-other_T2w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-vuiisIngenia04/anat/sub-vuiisIngenia04_T2w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-vuiisIngenia04/anat/sub-vuiisIngenia04_space-other_T2w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-vuiisIngenia04/anat/sub-vuiisIngenia04_T2w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-vuiisIngenia04/anat/sub-vuiisIngenia04_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-vuiisIngenia04/anat/sub-vuiisIngenia04_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-vuiisIngenia04/anat/sub-vuiisIngenia04_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-vuiisIngenia04/anat/sub-vuiisIngenia04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-vuiisIngenia04/anat/sub-vuiisIngenia04_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-vuiisIngenia04/anat/sub-vuiisIngenia04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-vuiisIngenia04/anat/sub-vuiisIngenia04_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-vuiisIngenia04/anat/sub-vuiisIngenia04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-vuiisIngenia04/anat/sub-vuiisIngenia04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-vuiisIngenia04/anat/sub-vuiisIngenia04_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-vuiisIngenia04/anat/sub-vuiisIngenia04_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-vuiisIngenia04/anat/sub-vuiisIngenia04_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-vuiisIngenia04/anat/sub-vuiisIngenia04_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-vuiisIngenia04/anat/sub-vuiisIngenia04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-vuiisIngenia04/anat/sub-vuiisIngenia04_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-vuiisIngenia04/anat/sub-vuiisIngenia04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-vuiisIngenia04/anat/sub-vuiisIngenia04_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-vuiisIngenia04/anat/sub-vuiisIngenia04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-vuiisIngenia04/anat/sub-vuiisIngenia04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-vuiisIngenia04/anat/sub-vuiisIngenia04_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-vuiisIngenia04/anat/sub-vuiisIngenia04_space-other_T2star_label-SC_seg.nii.gz b/derivatives/labels/sub-vuiisIngenia04/anat/sub-vuiisIngenia04_space-other_T2star_label-SC_seg.nii.gz index aef8220d1e..a38489ef91 100644 --- a/derivatives/labels/sub-vuiisIngenia04/anat/sub-vuiisIngenia04_space-other_T2star_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-vuiisIngenia04/anat/sub-vuiisIngenia04_space-other_T2star_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s8367--5cf4291747d408acea95b5b822c5632d902c76121e0a59ecc03249f908fdc1c2.nii.gz +/annex/objects/SHA256E-s8388--8e60b1970323cf6da32005eda0808ade2aa443bf0bfaf34782f00c15dc199db0.nii.gz diff --git a/derivatives/labels/sub-vuiisIngenia04/anat/sub-vuiisIngenia04_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-vuiisIngenia04/anat/sub-vuiisIngenia04_space-other_T2star_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-vuiisIngenia04/anat/sub-vuiisIngenia04_space-other_T2star_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-vuiisIngenia05/anat/sub-vuiisIngenia05_space-other_T1w_label-discs_dlabel.json b/derivatives/labels/sub-vuiisIngenia05/anat/sub-vuiisIngenia05_T1w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-vuiisIngenia05/anat/sub-vuiisIngenia05_space-other_T1w_label-discs_dlabel.json rename to derivatives/labels/sub-vuiisIngenia05/anat/sub-vuiisIngenia05_T1w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-vuiisIngenia05/anat/sub-vuiisIngenia05_space-other_T1w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-vuiisIngenia05/anat/sub-vuiisIngenia05_T1w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-vuiisIngenia05/anat/sub-vuiisIngenia05_space-other_T1w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-vuiisIngenia05/anat/sub-vuiisIngenia05_T1w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-vuiisIngenia05/anat/sub-vuiisIngenia05_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-vuiisIngenia05/anat/sub-vuiisIngenia05_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-vuiisIngenia05/anat/sub-vuiisIngenia05_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-vuiisIngenia05/anat/sub-vuiisIngenia05_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-vuiisIngenia05/anat/sub-vuiisIngenia05_T2star_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-vuiisIngenia05/anat/sub-vuiisIngenia05_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-vuiisIngenia05/anat/sub-vuiisIngenia05_T2star_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-vuiisIngenia05/anat/sub-vuiisIngenia05_space-other_T2w_label-discs_dlabel.json b/derivatives/labels/sub-vuiisIngenia05/anat/sub-vuiisIngenia05_T2w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-vuiisIngenia05/anat/sub-vuiisIngenia05_space-other_T2w_label-discs_dlabel.json rename to derivatives/labels/sub-vuiisIngenia05/anat/sub-vuiisIngenia05_T2w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-vuiisIngenia05/anat/sub-vuiisIngenia05_space-other_T2w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-vuiisIngenia05/anat/sub-vuiisIngenia05_T2w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-vuiisIngenia05/anat/sub-vuiisIngenia05_space-other_T2w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-vuiisIngenia05/anat/sub-vuiisIngenia05_T2w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-vuiisIngenia05/anat/sub-vuiisIngenia05_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-vuiisIngenia05/anat/sub-vuiisIngenia05_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-vuiisIngenia05/anat/sub-vuiisIngenia05_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-vuiisIngenia05/anat/sub-vuiisIngenia05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-vuiisIngenia05/anat/sub-vuiisIngenia05_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-vuiisIngenia05/anat/sub-vuiisIngenia05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-vuiisIngenia05/anat/sub-vuiisIngenia05_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-vuiisIngenia05/anat/sub-vuiisIngenia05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-vuiisIngenia05/anat/sub-vuiisIngenia05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-vuiisIngenia05/anat/sub-vuiisIngenia05_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-vuiisIngenia05/anat/sub-vuiisIngenia05_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-vuiisIngenia05/anat/sub-vuiisIngenia05_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-vuiisIngenia05/anat/sub-vuiisIngenia05_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-vuiisIngenia05/anat/sub-vuiisIngenia05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-vuiisIngenia05/anat/sub-vuiisIngenia05_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-vuiisIngenia05/anat/sub-vuiisIngenia05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-vuiisIngenia05/anat/sub-vuiisIngenia05_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-vuiisIngenia05/anat/sub-vuiisIngenia05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-vuiisIngenia05/anat/sub-vuiisIngenia05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-vuiisIngenia05/anat/sub-vuiisIngenia05_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-vuiisIngenia05/anat/sub-vuiisIngenia05_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.json b/derivatives/labels/sub-vuiisIngenia05/anat/sub-vuiisIngenia05_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.json new file mode 100644 index 0000000000..e537a137e5 --- /dev/null +++ b/derivatives/labels/sub-vuiisIngenia05/anat/sub-vuiisIngenia05_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.json @@ -0,0 +1,11 @@ +{ + "SpatialReference": { + "Orientation": "RPI", + "Resampling": "1x1x1" + }, + "GeneratedBy": [ + { + "Description": "Manual label of C2 and C5 mid-vertebrae, at the center of the spinal cord." + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-vuiisIngenia05/anat/sub-vuiisIngenia05_space-other_T1w_RPI_r_labels-manual.nii.gz b/derivatives/labels/sub-vuiisIngenia05/anat/sub-vuiisIngenia05_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-vuiisIngenia05/anat/sub-vuiisIngenia05_space-other_T1w_RPI_r_labels-manual.nii.gz rename to derivatives/labels/sub-vuiisIngenia05/anat/sub-vuiisIngenia05_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.nii.gz diff --git a/derivatives/labels/sub-vuiisIngenia05/anat/sub-vuiisIngenia05_space-other_T2star_label-SC_seg.nii.gz b/derivatives/labels/sub-vuiisIngenia05/anat/sub-vuiisIngenia05_space-other_T2star_label-SC_seg.nii.gz index 84743942fa..6dca83576b 100644 --- a/derivatives/labels/sub-vuiisIngenia05/anat/sub-vuiisIngenia05_space-other_T2star_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-vuiisIngenia05/anat/sub-vuiisIngenia05_space-other_T2star_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s8441--cd7bf02d3fbb20062c6d21aceefc2e5b8914e4dec10c8cb4d6b96c4cbc069836.nii.gz +/annex/objects/SHA256E-s8462--dab721f16c617909d7085c22cf16a4e2ab12c769bf49042df513837bfa361ec4.nii.gz diff --git a/derivatives/labels/sub-vuiisIngenia05/anat/sub-vuiisIngenia05_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-vuiisIngenia05/anat/sub-vuiisIngenia05_space-other_T2star_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-vuiisIngenia05/anat/sub-vuiisIngenia05_space-other_T2star_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-vuiisIngenia06/anat/sub-vuiisIngenia06_space-other_T1w_label-discs_dlabel.json b/derivatives/labels/sub-vuiisIngenia06/anat/sub-vuiisIngenia06_T1w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-vuiisIngenia06/anat/sub-vuiisIngenia06_space-other_T1w_label-discs_dlabel.json rename to derivatives/labels/sub-vuiisIngenia06/anat/sub-vuiisIngenia06_T1w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-vuiisIngenia06/anat/sub-vuiisIngenia06_space-other_T1w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-vuiisIngenia06/anat/sub-vuiisIngenia06_T1w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-vuiisIngenia06/anat/sub-vuiisIngenia06_space-other_T1w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-vuiisIngenia06/anat/sub-vuiisIngenia06_T1w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-vuiisIngenia06/anat/sub-vuiisIngenia06_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-vuiisIngenia06/anat/sub-vuiisIngenia06_T2star_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-vuiisIngenia06/anat/sub-vuiisIngenia06_T2star_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-vuiisIngenia06/anat/sub-vuiisIngenia06_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-vuiisIngenia06/anat/sub-vuiisIngenia06_T2star_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-vuiisIngenia06/anat/sub-vuiisIngenia06_space-other_T2star_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-vuiisIngenia06/anat/sub-vuiisIngenia06_T2star_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-vuiisIngenia06/anat/sub-vuiisIngenia06_space-other_T2w_label-discs_dlabel.json b/derivatives/labels/sub-vuiisIngenia06/anat/sub-vuiisIngenia06_T2w_label-discs_dlabel.json similarity index 100% rename from derivatives/labels/sub-vuiisIngenia06/anat/sub-vuiisIngenia06_space-other_T2w_label-discs_dlabel.json rename to derivatives/labels/sub-vuiisIngenia06/anat/sub-vuiisIngenia06_T2w_label-discs_dlabel.json diff --git a/derivatives/labels/sub-vuiisIngenia06/anat/sub-vuiisIngenia06_space-other_T2w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-vuiisIngenia06/anat/sub-vuiisIngenia06_T2w_label-discs_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-vuiisIngenia06/anat/sub-vuiisIngenia06_space-other_T2w_label-discs_dlabel.nii.gz rename to derivatives/labels/sub-vuiisIngenia06/anat/sub-vuiisIngenia06_T2w_label-discs_dlabel.nii.gz diff --git a/derivatives/labels/sub-vuiisIngenia06/anat/sub-vuiisIngenia06_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-vuiisIngenia06/anat/sub-vuiisIngenia06_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-vuiisIngenia06/anat/sub-vuiisIngenia06_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-vuiisIngenia06/anat/sub-vuiisIngenia06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-vuiisIngenia06/anat/sub-vuiisIngenia06_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-vuiisIngenia06/anat/sub-vuiisIngenia06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-vuiisIngenia06/anat/sub-vuiisIngenia06_flip-1_mt-on_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-vuiisIngenia06/anat/sub-vuiisIngenia06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-vuiisIngenia06/anat/sub-vuiisIngenia06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-vuiisIngenia06/anat/sub-vuiisIngenia06_flip-1_mt-on_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-vuiisIngenia06/anat/sub-vuiisIngenia06_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-vuiisIngenia06/anat/sub-vuiisIngenia06_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json new file mode 100644 index 0000000000..26b4328e81 --- /dev/null +++ b/derivatives/labels/sub-vuiisIngenia06/anat/sub-vuiisIngenia06_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_register_multimodal", + "Version": "SCT v6.1", + "Description": "Warp from T2w discs labels" + } + ] +} \ No newline at end of file diff --git a/derivatives/labels/sub-vuiisIngenia06/anat/sub-vuiisIngenia06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz b/derivatives/labels/sub-vuiisIngenia06/anat/sub-vuiisIngenia06_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-vuiisIngenia06/anat/sub-vuiisIngenia06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.nii.gz rename to derivatives/labels/sub-vuiisIngenia06/anat/sub-vuiisIngenia06_flip-2_mt-off_MTS_label-discs_desc-warp_dlabel.nii.gz diff --git a/derivatives/labels/sub-vuiisIngenia06/anat/sub-vuiisIngenia06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-vuiisIngenia06/anat/sub-vuiisIngenia06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-vuiisIngenia06/anat/sub-vuiisIngenia06_flip-2_mt-off_space-other_MTS_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file diff --git a/derivatives/labels/sub-vuiisIngenia06/anat/sub-vuiisIngenia06_space-other_T2star_label-SC_seg.nii.gz b/derivatives/labels/sub-vuiisIngenia06/anat/sub-vuiisIngenia06_space-other_T2star_label-SC_seg.nii.gz index c726f1eebb..2a66070cf2 100644 --- a/derivatives/labels/sub-vuiisIngenia06/anat/sub-vuiisIngenia06_space-other_T2star_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-vuiisIngenia06/anat/sub-vuiisIngenia06_space-other_T2star_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s8336--2192cdb0026537814397b01d1624adab74a606df4934067c20c0b6cbd51559a7.nii.gz +/annex/objects/SHA256E-s8357--686fac33c0f649e8fe94c024ff70d2d02034435e309253ef8ca682afdf00c91c.nii.gz diff --git a/derivatives/labels/sub-vuiisIngenia06/anat/sub-vuiisIngenia06_space-other_T2star_label-discs_desc-warp_dlabel.json b/derivatives/labels/sub-vuiisIngenia06/anat/sub-vuiisIngenia06_space-other_T2star_label-discs_desc-warp_dlabel.json deleted file mode 100644 index d17e7a9167..0000000000 --- a/derivatives/labels/sub-vuiisIngenia06/anat/sub-vuiisIngenia06_space-other_T2star_label-discs_desc-warp_dlabel.json +++ /dev/null @@ -1,12 +0,0 @@ -{ - "SpatialReference": { - "Orientation": "RPI" - }, - "GeneratedBy": [ - { - "Name": "sct_register_multimodal", - "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" - } - ] -} \ No newline at end of file From 5a4545f0f67dae8644584ce20529adb2af95c5c7 Mon Sep 17 00:00:00 2001 From: Sandrine Bedard Date: Mon, 19 Feb 2024 16:28:43 -0500 Subject: [PATCH 08/21] add dwi json --- .../sub-amu01/anat/sub-amu01_space-other_T2star.nii.gz | 2 +- .../sub-amu01/dwi/sub-amu01_rec-average_dwi.json | 9 +++++++++ .../sub-amu02/anat/sub-amu02_space-other_T2star.nii.gz | 2 +- .../sub-amu02/dwi/sub-amu02_rec-average_dwi.json | 9 +++++++++ .../sub-amu03/anat/sub-amu03_space-other_T2star.nii.gz | 2 +- .../sub-amu03/dwi/sub-amu03_rec-average_dwi.json | 9 +++++++++ .../sub-amu04/anat/sub-amu04_space-other_T2star.nii.gz | 2 +- .../sub-amu04/dwi/sub-amu04_rec-average_dwi.json | 9 +++++++++ .../sub-amu05/anat/sub-amu05_space-other_T2star.nii.gz | 2 +- .../sub-amu05/dwi/sub-amu05_rec-average_dwi.json | 9 +++++++++ .../anat/sub-balgrist01_space-other_T2star.nii.gz | 2 +- .../dwi/sub-balgrist01_rec-average_dwi.json | 9 +++++++++ .../anat/sub-balgrist02_space-other_T2star.nii.gz | 2 +- .../dwi/sub-balgrist02_rec-average_dwi.json | 9 +++++++++ .../anat/sub-balgrist03_space-other_T2star.nii.gz | 2 +- .../dwi/sub-balgrist03_rec-average_dwi.json | 9 +++++++++ .../anat/sub-balgrist04_space-other_T2star.nii.gz | 2 +- .../dwi/sub-balgrist04_rec-average_dwi.json | 9 +++++++++ .../anat/sub-balgrist05_space-other_T2star.nii.gz | 2 +- .../dwi/sub-balgrist05_rec-average_dwi.json | 9 +++++++++ .../anat/sub-balgrist06_space-other_T2star.nii.gz | 2 +- .../dwi/sub-balgrist06_rec-average_dwi.json | 9 +++++++++ .../anat/sub-barcelona01_space-other_T2star.nii.gz | 2 +- .../dwi/sub-barcelona01_rec-average_dwi.json | 9 +++++++++ .../anat/sub-barcelona02_space-other_T2star.nii.gz | 2 +- .../dwi/sub-barcelona02_rec-average_dwi.json | 9 +++++++++ .../anat/sub-barcelona03_space-other_T2star.nii.gz | 2 +- .../dwi/sub-barcelona03_rec-average_dwi.json | 9 +++++++++ .../anat/sub-barcelona04_space-other_T2star.nii.gz | 2 +- .../dwi/sub-barcelona04_rec-average_dwi.json | 9 +++++++++ .../anat/sub-barcelona05_space-other_T2star.nii.gz | 2 +- .../dwi/sub-barcelona05_rec-average_dwi.json | 9 +++++++++ .../anat/sub-barcelona06_space-other_T2star.nii.gz | 2 +- .../dwi/sub-barcelona06_rec-average_dwi.json | 9 +++++++++ .../anat/sub-beijingGE01_space-other_T2star.nii.gz | 2 +- .../dwi/sub-beijingGE01_rec-average_dwi.json | 9 +++++++++ .../anat/sub-beijingGE02_space-other_T2star.nii.gz | 2 +- .../dwi/sub-beijingGE02_rec-average_dwi.json | 9 +++++++++ .../anat/sub-beijingGE03_space-other_T2star.nii.gz | 2 +- .../dwi/sub-beijingGE03_rec-average_dwi.json | 9 +++++++++ .../anat/sub-beijingGE04_space-other_T2star.nii.gz | 2 +- .../dwi/sub-beijingGE04_rec-average_dwi.json | 9 +++++++++ .../anat/sub-beijingPrisma01_space-other_T2star.nii.gz | 2 +- .../dwi/sub-beijingPrisma01_rec-average_dwi.json | 9 +++++++++ .../anat/sub-beijingPrisma02_space-other_T2star.nii.gz | 2 +- .../dwi/sub-beijingPrisma02_rec-average_dwi.json | 9 +++++++++ .../anat/sub-beijingPrisma03_space-other_T2star.nii.gz | 2 +- .../dwi/sub-beijingPrisma03_rec-average_dwi.json | 9 +++++++++ .../anat/sub-beijingPrisma04_space-other_T2star.nii.gz | 2 +- .../dwi/sub-beijingPrisma04_rec-average_dwi.json | 9 +++++++++ .../anat/sub-beijingPrisma05_space-other_T2star.nii.gz | 2 +- .../dwi/sub-beijingPrisma05_rec-average_dwi.json | 9 +++++++++ .../anat/sub-beijingVerio01_space-other_T2star.nii.gz | 2 +- .../dwi/sub-beijingVerio01_rec-average_dwi.json | 9 +++++++++ .../anat/sub-beijingVerio02_space-other_T2star.nii.gz | 2 +- .../dwi/sub-beijingVerio02_rec-average_dwi.json | 9 +++++++++ .../anat/sub-beijingVerio03_space-other_T2star.nii.gz | 2 +- .../dwi/sub-beijingVerio03_rec-average_dwi.json | 9 +++++++++ .../anat/sub-beijingVerio04_space-other_T2star.nii.gz | 2 +- .../dwi/sub-beijingVerio04_rec-average_dwi.json | 9 +++++++++ .../anat/sub-brnoCeitec01_space-other_T2star.nii.gz | 2 +- .../dwi/sub-brnoCeitec01_rec-average_dwi.json | 9 +++++++++ .../anat/sub-brnoCeitec02_space-other_T2star.nii.gz | 2 +- .../dwi/sub-brnoCeitec02_rec-average_dwi.json | 9 +++++++++ .../anat/sub-brnoCeitec03_space-other_T2star.nii.gz | 2 +- .../dwi/sub-brnoCeitec03_rec-average_dwi.json | 9 +++++++++ .../anat/sub-brnoCeitec04_space-other_T2star.nii.gz | 2 +- .../dwi/sub-brnoCeitec04_rec-average_dwi.json | 9 +++++++++ .../anat/sub-brnoCeitec05_space-other_T2star.nii.gz | 2 +- .../dwi/sub-brnoCeitec05_rec-average_dwi.json | 9 +++++++++ .../anat/sub-brnoCeitec06_space-other_T2star.nii.gz | 2 +- .../dwi/sub-brnoCeitec06_rec-average_dwi.json | 9 +++++++++ .../anat/sub-brnoUhb01_space-other_T2star.nii.gz | 2 +- .../sub-brnoUhb01/dwi/sub-brnoUhb01_rec-average_dwi.json | 9 +++++++++ .../anat/sub-brnoUhb02_space-other_T2star.nii.gz | 2 +- .../sub-brnoUhb02/dwi/sub-brnoUhb02_rec-average_dwi.json | 9 +++++++++ .../anat/sub-brnoUhb03_space-other_T2star.nii.gz | 2 +- .../sub-brnoUhb03/dwi/sub-brnoUhb03_rec-average_dwi.json | 9 +++++++++ .../anat/sub-brnoUhb04_space-other_T2star.nii.gz | 2 +- .../sub-brnoUhb04/dwi/sub-brnoUhb04_rec-average_dwi.json | 9 +++++++++ .../anat/sub-brnoUhb05_space-other_T2star.nii.gz | 2 +- .../sub-brnoUhb05/dwi/sub-brnoUhb05_rec-average_dwi.json | 9 +++++++++ .../anat/sub-brnoUhb06_space-other_T2star.nii.gz | 2 +- .../sub-brnoUhb06/dwi/sub-brnoUhb06_rec-average_dwi.json | 9 +++++++++ .../anat/sub-brnoUhb07_space-other_T2star.nii.gz | 2 +- .../sub-brnoUhb07/dwi/sub-brnoUhb07_rec-average_dwi.json | 9 +++++++++ .../anat/sub-brnoUhb08_space-other_T2star.nii.gz | 2 +- .../sub-brnoUhb08/dwi/sub-brnoUhb08_rec-average_dwi.json | 9 +++++++++ .../anat/sub-cardiff01_space-other_T2star.nii.gz | 2 +- .../sub-cardiff01/dwi/sub-cardiff01_rec-average_dwi.json | 9 +++++++++ .../anat/sub-cardiff02_space-other_T2star.nii.gz | 2 +- .../sub-cardiff02/dwi/sub-cardiff02_rec-average_dwi.json | 9 +++++++++ .../anat/sub-cardiff03_space-other_T2star.nii.gz | 2 +- .../sub-cardiff03/dwi/sub-cardiff03_rec-average_dwi.json | 9 +++++++++ .../anat/sub-cardiff04_space-other_T2star.nii.gz | 2 +- .../sub-cardiff04/dwi/sub-cardiff04_rec-average_dwi.json | 9 +++++++++ .../anat/sub-cardiff05_space-other_T2star.nii.gz | 2 +- .../sub-cardiff05/dwi/sub-cardiff05_rec-average_dwi.json | 9 +++++++++ .../anat/sub-cardiff06_space-other_T2star.nii.gz | 2 +- .../sub-cardiff06/dwi/sub-cardiff06_rec-average_dwi.json | 9 +++++++++ .../anat/sub-cmrra01_space-other_T2star.nii.gz | 2 +- .../sub-cmrra01/dwi/sub-cmrra01_rec-average_dwi.json | 9 +++++++++ .../anat/sub-cmrra02_space-other_T2star.nii.gz | 2 +- .../sub-cmrra02/dwi/sub-cmrra02_rec-average_dwi.json | 9 +++++++++ .../anat/sub-cmrra03_space-other_T2star.nii.gz | 2 +- .../sub-cmrra03/dwi/sub-cmrra03_rec-average_dwi.json | 9 +++++++++ .../anat/sub-cmrra04_space-other_T2star.nii.gz | 2 +- .../sub-cmrra04/dwi/sub-cmrra04_rec-average_dwi.json | 9 +++++++++ .../anat/sub-cmrra05_space-other_T2star.nii.gz | 2 +- .../sub-cmrra05/dwi/sub-cmrra05_rec-average_dwi.json | 9 +++++++++ .../anat/sub-cmrra06_space-other_T2star.nii.gz | 2 +- .../sub-cmrra06/dwi/sub-cmrra06_rec-average_dwi.json | 9 +++++++++ .../anat/sub-cmrrb01_space-other_T2star.nii.gz | 2 +- .../sub-cmrrb01/dwi/sub-cmrrb01_rec-average_dwi.json | 9 +++++++++ .../anat/sub-cmrrb02_space-other_T2star.nii.gz | 2 +- .../sub-cmrrb02/dwi/sub-cmrrb02_rec-average_dwi.json | 9 +++++++++ .../anat/sub-cmrrb03_space-other_T2star.nii.gz | 2 +- .../sub-cmrrb03/dwi/sub-cmrrb03_rec-average_dwi.json | 9 +++++++++ .../anat/sub-cmrrb04_space-other_T2star.nii.gz | 2 +- .../sub-cmrrb04/dwi/sub-cmrrb04_rec-average_dwi.json | 9 +++++++++ .../anat/sub-cmrrb05_space-other_T2star.nii.gz | 2 +- .../sub-cmrrb05/dwi/sub-cmrrb05_rec-average_dwi.json | 9 +++++++++ .../anat/sub-cmrrb06_space-other_T2star.nii.gz | 2 +- .../sub-cmrrb06/dwi/sub-cmrrb06_rec-average_dwi.json | 9 +++++++++ .../anat/sub-cmrrb07_space-other_T2star.nii.gz | 2 +- .../sub-cmrrb07/dwi/sub-cmrrb07_rec-average_dwi.json | 9 +++++++++ .../anat/sub-dresden01_space-other_T2star.nii.gz | 2 +- .../sub-dresden01/dwi/sub-dresden01_rec-average_dwi.json | 9 +++++++++ .../anat/sub-dresden02_space-other_T2star.nii.gz | 2 +- .../sub-dresden02/dwi/sub-dresden02_rec-average_dwi.json | 9 +++++++++ .../anat/sub-fslAchieva01_space-other_T2star.nii.gz | 2 +- .../dwi/sub-fslAchieva01_rec-average_dwi.json | 9 +++++++++ .../anat/sub-fslAchieva02_space-other_T2star.nii.gz | 2 +- .../dwi/sub-fslAchieva02_rec-average_dwi.json | 9 +++++++++ .../anat/sub-fslAchieva03_space-other_T2star.nii.gz | 2 +- .../dwi/sub-fslAchieva03_rec-average_dwi.json | 9 +++++++++ .../anat/sub-fslAchieva04_space-other_T2star.nii.gz | 2 +- .../dwi/sub-fslAchieva04_rec-average_dwi.json | 9 +++++++++ .../anat/sub-fslAchieva05_space-other_T2star.nii.gz | 2 +- .../dwi/sub-fslAchieva05_rec-average_dwi.json | 9 +++++++++ .../anat/sub-fslAchieva06_space-other_T2star.nii.gz | 2 +- .../dwi/sub-fslAchieva06_rec-average_dwi.json | 9 +++++++++ .../anat/sub-fslPrisma01_space-other_T2star.nii.gz | 2 +- .../dwi/sub-fslPrisma01_rec-average_dwi.json | 9 +++++++++ .../anat/sub-fslPrisma02_space-other_T2star.nii.gz | 2 +- .../dwi/sub-fslPrisma02_rec-average_dwi.json | 9 +++++++++ .../anat/sub-fslPrisma03_space-other_T2star.nii.gz | 2 +- .../dwi/sub-fslPrisma03_rec-average_dwi.json | 9 +++++++++ .../anat/sub-fslPrisma04_space-other_T2star.nii.gz | 2 +- .../dwi/sub-fslPrisma04_rec-average_dwi.json | 9 +++++++++ .../anat/sub-fslPrisma05_space-other_T2star.nii.gz | 2 +- .../dwi/sub-fslPrisma05_rec-average_dwi.json | 9 +++++++++ .../anat/sub-fslPrisma06_space-other_T2star.nii.gz | 2 +- .../dwi/sub-fslPrisma06_rec-average_dwi.json | 9 +++++++++ .../anat/sub-geneva01_space-other_T2star.nii.gz | 2 +- .../sub-geneva01/dwi/sub-geneva01_rec-average_dwi.json | 9 +++++++++ .../anat/sub-geneva02_space-other_T2star.nii.gz | 2 +- .../sub-geneva02/dwi/sub-geneva02_rec-average_dwi.json | 9 +++++++++ .../anat/sub-geneva03_space-other_T2star.nii.gz | 2 +- .../sub-geneva03/dwi/sub-geneva03_rec-average_dwi.json | 9 +++++++++ .../anat/sub-geneva04_space-other_T2star.nii.gz | 2 +- .../sub-geneva04/dwi/sub-geneva04_rec-average_dwi.json | 9 +++++++++ .../anat/sub-geneva05_space-other_T2star.nii.gz | 2 +- .../sub-geneva05/dwi/sub-geneva05_rec-average_dwi.json | 9 +++++++++ .../anat/sub-geneva06_space-other_T2star.nii.gz | 2 +- .../sub-geneva06/dwi/sub-geneva06_rec-average_dwi.json | 9 +++++++++ .../anat/sub-hamburg01_space-other_T2star.nii.gz | 2 +- .../sub-hamburg01/dwi/sub-hamburg01_rec-average_dwi.json | 9 +++++++++ .../anat/sub-hamburg02_space-other_T2star.nii.gz | 2 +- .../sub-hamburg02/dwi/sub-hamburg02_rec-average_dwi.json | 9 +++++++++ .../anat/sub-hamburg03_space-other_T2star.nii.gz | 2 +- .../sub-hamburg03/dwi/sub-hamburg03_rec-average_dwi.json | 9 +++++++++ .../anat/sub-hamburg04_space-other_T2star.nii.gz | 2 +- .../sub-hamburg04/dwi/sub-hamburg04_rec-average_dwi.json | 9 +++++++++ .../anat/sub-hamburg05_space-other_T2star.nii.gz | 2 +- .../sub-hamburg05/dwi/sub-hamburg05_rec-average_dwi.json | 9 +++++++++ .../anat/sub-hamburg06_space-other_T2star.nii.gz | 2 +- .../sub-hamburg06/dwi/sub-hamburg06_rec-average_dwi.json | 9 +++++++++ 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--- a/derivatives/data_preprocessed/sub-barcelona04/anat/sub-barcelona04_space-other_T2star.nii.gz +++ b/derivatives/data_preprocessed/sub-barcelona04/anat/sub-barcelona04_space-other_T2star.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s3979151--d790376c43adf640f794171e233c9a130db9201cfefd9ed3b29e5181ad258b88.nii.gz +/annex/objects/SHA256E-s3979172--bfa5360f81a843cbda1c80110db75eca1645ec087be5e449aa6fd0812c867c7b.nii.gz diff --git a/derivatives/data_preprocessed/sub-barcelona04/dwi/sub-barcelona04_rec-average_dwi.json b/derivatives/data_preprocessed/sub-barcelona04/dwi/sub-barcelona04_rec-average_dwi.json new file mode 100644 index 0000000000..a218d9b38a --- /dev/null +++ b/derivatives/data_preprocessed/sub-barcelona04/dwi/sub-barcelona04_rec-average_dwi.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_dmri_moco", + "Version": "SCT v6.1", + "Description": "Mean image across directions after motion correction" + } + ] +} \ No newline at end of file diff --git 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--- a/derivatives/data_preprocessed/sub-beijingGE02/anat/sub-beijingGE02_space-other_T2star.nii.gz +++ b/derivatives/data_preprocessed/sub-beijingGE02/anat/sub-beijingGE02_space-other_T2star.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s7240428--769dfd1fc819db03da04b3d65ac7d37a819b01e9c1292bda0af3d8c94ca64a50.nii.gz +/annex/objects/SHA256E-s7240440--c9864ee2b31e545b4061183d0c1522192da578485fb45b17daa80d397f57879e.nii.gz diff --git a/derivatives/data_preprocessed/sub-beijingGE02/dwi/sub-beijingGE02_rec-average_dwi.json b/derivatives/data_preprocessed/sub-beijingGE02/dwi/sub-beijingGE02_rec-average_dwi.json new file mode 100644 index 0000000000..a218d9b38a --- /dev/null +++ b/derivatives/data_preprocessed/sub-beijingGE02/dwi/sub-beijingGE02_rec-average_dwi.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_dmri_moco", + "Version": "SCT v6.1", + "Description": "Mean image across directions after motion correction" + } + ] +} \ No newline at end of file diff --git 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-0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_dmri_moco", + "Version": "SCT v6.1", + "Description": "Mean image across directions after motion correction" + } + ] +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-beijingGE04/anat/sub-beijingGE04_space-other_T2star.nii.gz b/derivatives/data_preprocessed/sub-beijingGE04/anat/sub-beijingGE04_space-other_T2star.nii.gz index 2e446df65a..f8ef578471 100644 --- a/derivatives/data_preprocessed/sub-beijingGE04/anat/sub-beijingGE04_space-other_T2star.nii.gz +++ b/derivatives/data_preprocessed/sub-beijingGE04/anat/sub-beijingGE04_space-other_T2star.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s7469065--825914b93bfda9a9fd025dfb2d3c62fab7bffe01923632e053356a27e876ed8b.nii.gz +/annex/objects/SHA256E-s7469077--a09419e7c494a21e7965bd94bf9273ab60055e1d8a617cb6a80bc910adef2a5e.nii.gz diff --git a/derivatives/data_preprocessed/sub-beijingGE04/dwi/sub-beijingGE04_rec-average_dwi.json 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"sct_dmri_moco", + "Version": "SCT v6.1", + "Description": "Mean image across directions after motion correction" + } + ] +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-beijingPrisma03/anat/sub-beijingPrisma03_space-other_T2star.nii.gz b/derivatives/data_preprocessed/sub-beijingPrisma03/anat/sub-beijingPrisma03_space-other_T2star.nii.gz index f28816d753..a5f0c2d7c5 100644 --- a/derivatives/data_preprocessed/sub-beijingPrisma03/anat/sub-beijingPrisma03_space-other_T2star.nii.gz +++ b/derivatives/data_preprocessed/sub-beijingPrisma03/anat/sub-beijingPrisma03_space-other_T2star.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s3937347--e16fd27ee0486dbf77d5168921e62c5a8b362a965d98a2c617aa8493bdf23a7e.nii.gz +/annex/objects/SHA256E-s3937359--83423e93107e3e5769e05c2206fb8eb95a0b8c25e8ded73d7b885fa8874bd0c9.nii.gz diff --git a/derivatives/data_preprocessed/sub-beijingPrisma03/dwi/sub-beijingPrisma03_rec-average_dwi.json 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"sct_dmri_moco", + "Version": "SCT v6.1", + "Description": "Mean image across directions after motion correction" + } + ] +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-beijingVerio01/anat/sub-beijingVerio01_space-other_T2star.nii.gz b/derivatives/data_preprocessed/sub-beijingVerio01/anat/sub-beijingVerio01_space-other_T2star.nii.gz index 7d7d202485..b80002ef42 100644 --- a/derivatives/data_preprocessed/sub-beijingVerio01/anat/sub-beijingVerio01_space-other_T2star.nii.gz +++ b/derivatives/data_preprocessed/sub-beijingVerio01/anat/sub-beijingVerio01_space-other_T2star.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s4550697--c3ccece235fdd39a171fd3b7a87f90665b49f6c56b177dbb3005deda6d96608d.nii.gz +/annex/objects/SHA256E-s4550709--f9060145ffed79353c73f3b7aa8e2f83232dd29866f44caba922a5a2cd2b96cf.nii.gz diff --git a/derivatives/data_preprocessed/sub-beijingVerio01/dwi/sub-beijingVerio01_rec-average_dwi.json 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3675d796f9..821dd932cb 100644 --- a/derivatives/data_preprocessed/sub-beijingVerio03/anat/sub-beijingVerio03_space-other_T2star.nii.gz +++ b/derivatives/data_preprocessed/sub-beijingVerio03/anat/sub-beijingVerio03_space-other_T2star.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s4769327--90db0812ecf132fd1a6338da22c9b4022787717957b18f2f2e91af6531ca143a.nii.gz +/annex/objects/SHA256E-s4769339--3abbd938aa2fda64bdb5fa8f5996a3a8ca7aa6e0fd13a5c3a29d12091b7714e2.nii.gz diff --git a/derivatives/data_preprocessed/sub-beijingVerio03/dwi/sub-beijingVerio03_rec-average_dwi.json b/derivatives/data_preprocessed/sub-beijingVerio03/dwi/sub-beijingVerio03_rec-average_dwi.json new file mode 100644 index 0000000000..a218d9b38a --- /dev/null +++ b/derivatives/data_preprocessed/sub-beijingVerio03/dwi/sub-beijingVerio03_rec-average_dwi.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_dmri_moco", + "Version": "SCT v6.1", + "Description": "Mean image across directions after motion correction" + } + ] +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-beijingVerio04/anat/sub-beijingVerio04_space-other_T2star.nii.gz b/derivatives/data_preprocessed/sub-beijingVerio04/anat/sub-beijingVerio04_space-other_T2star.nii.gz index a579a8a9cb..a0c0163711 100644 --- a/derivatives/data_preprocessed/sub-beijingVerio04/anat/sub-beijingVerio04_space-other_T2star.nii.gz +++ b/derivatives/data_preprocessed/sub-beijingVerio04/anat/sub-beijingVerio04_space-other_T2star.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s5121691--57e6151c38ebf1140b13412c38e13d7ae805fe399a6c9a1607fa7b6c04dbb2d6.nii.gz +/annex/objects/SHA256E-s5121703--872badb24e032209d02508f85cf8d10402e76ad5c31665ee4b80f68fd3237ee4.nii.gz diff --git a/derivatives/data_preprocessed/sub-beijingVerio04/dwi/sub-beijingVerio04_rec-average_dwi.json b/derivatives/data_preprocessed/sub-beijingVerio04/dwi/sub-beijingVerio04_rec-average_dwi.json new file mode 100644 index 0000000000..a218d9b38a --- /dev/null +++ b/derivatives/data_preprocessed/sub-beijingVerio04/dwi/sub-beijingVerio04_rec-average_dwi.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_dmri_moco", + "Version": "SCT v6.1", + "Description": "Mean image across directions after motion correction" + } + ] +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-brnoCeitec01/anat/sub-brnoCeitec01_space-other_T2star.nii.gz b/derivatives/data_preprocessed/sub-brnoCeitec01/anat/sub-brnoCeitec01_space-other_T2star.nii.gz index 48abb3741e..14ed79306a 100644 --- a/derivatives/data_preprocessed/sub-brnoCeitec01/anat/sub-brnoCeitec01_space-other_T2star.nii.gz +++ b/derivatives/data_preprocessed/sub-brnoCeitec01/anat/sub-brnoCeitec01_space-other_T2star.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s4084678--2153f97d181a01dff392305faf3687cf39797037b99aecbb58bbe56507cd97e2.nii.gz +/annex/objects/SHA256E-s4084690--eac4cd342ef474126750428289ae4cb150e92df46ce3498ab40b00f514ea9a99.nii.gz diff --git 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be9391d0ae..00c7f45ac6 100644 --- a/derivatives/data_preprocessed/sub-brnoCeitec03/anat/sub-brnoCeitec03_space-other_T2star.nii.gz +++ b/derivatives/data_preprocessed/sub-brnoCeitec03/anat/sub-brnoCeitec03_space-other_T2star.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s4241050--a5ad1917afe36a15d9cf4d91be22f6c22906374d1d062275685a1b4fc60672b0.nii.gz +/annex/objects/SHA256E-s4241062--c5b7e812a97244b6755b8a6f2cff6169918ec2f4c0013a6aee4cb8ab6bb4582d.nii.gz diff --git a/derivatives/data_preprocessed/sub-brnoCeitec03/dwi/sub-brnoCeitec03_rec-average_dwi.json b/derivatives/data_preprocessed/sub-brnoCeitec03/dwi/sub-brnoCeitec03_rec-average_dwi.json new file mode 100644 index 0000000000..a218d9b38a --- /dev/null +++ b/derivatives/data_preprocessed/sub-brnoCeitec03/dwi/sub-brnoCeitec03_rec-average_dwi.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_dmri_moco", + "Version": "SCT v6.1", + "Description": "Mean image across directions after motion correction" + } + ] +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-brnoCeitec04/anat/sub-brnoCeitec04_space-other_T2star.nii.gz b/derivatives/data_preprocessed/sub-brnoCeitec04/anat/sub-brnoCeitec04_space-other_T2star.nii.gz index abd1d0a0a9..4ccc53058d 100644 --- a/derivatives/data_preprocessed/sub-brnoCeitec04/anat/sub-brnoCeitec04_space-other_T2star.nii.gz +++ b/derivatives/data_preprocessed/sub-brnoCeitec04/anat/sub-brnoCeitec04_space-other_T2star.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s3728388--58cf0246000671a322c760927af35f1883acc21085affa4b5ea9d1ad92665ef8.nii.gz +/annex/objects/SHA256E-s3728400--43a331deb7a231803cdba72d32184a9c8a079bd708967074d2ce2b4523f15f59.nii.gz diff --git a/derivatives/data_preprocessed/sub-brnoCeitec04/dwi/sub-brnoCeitec04_rec-average_dwi.json b/derivatives/data_preprocessed/sub-brnoCeitec04/dwi/sub-brnoCeitec04_rec-average_dwi.json new file mode 100644 index 0000000000..a218d9b38a --- /dev/null +++ b/derivatives/data_preprocessed/sub-brnoCeitec04/dwi/sub-brnoCeitec04_rec-average_dwi.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_dmri_moco", + "Version": "SCT v6.1", + "Description": "Mean image across directions after motion correction" + } + ] +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-brnoCeitec05/anat/sub-brnoCeitec05_space-other_T2star.nii.gz b/derivatives/data_preprocessed/sub-brnoCeitec05/anat/sub-brnoCeitec05_space-other_T2star.nii.gz index 20cad7b9fc..5f1623e62b 100644 --- a/derivatives/data_preprocessed/sub-brnoCeitec05/anat/sub-brnoCeitec05_space-other_T2star.nii.gz +++ b/derivatives/data_preprocessed/sub-brnoCeitec05/anat/sub-brnoCeitec05_space-other_T2star.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s3472990--8eadade42348a112871767af0d8446a6260508272f17071a018f24f7210eae81.nii.gz +/annex/objects/SHA256E-s3473002--56556232f75c1983075199a94f111cfe5c5158320c4ede6091f4c17df206cfcc.nii.gz diff --git a/derivatives/data_preprocessed/sub-brnoCeitec05/dwi/sub-brnoCeitec05_rec-average_dwi.json b/derivatives/data_preprocessed/sub-brnoCeitec05/dwi/sub-brnoCeitec05_rec-average_dwi.json new file mode 100644 index 0000000000..a218d9b38a --- /dev/null +++ b/derivatives/data_preprocessed/sub-brnoCeitec05/dwi/sub-brnoCeitec05_rec-average_dwi.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_dmri_moco", + "Version": "SCT v6.1", + "Description": "Mean image across directions after motion correction" + } + ] +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-brnoCeitec06/anat/sub-brnoCeitec06_space-other_T2star.nii.gz b/derivatives/data_preprocessed/sub-brnoCeitec06/anat/sub-brnoCeitec06_space-other_T2star.nii.gz index 62b3e64368..382fded642 100644 --- a/derivatives/data_preprocessed/sub-brnoCeitec06/anat/sub-brnoCeitec06_space-other_T2star.nii.gz +++ b/derivatives/data_preprocessed/sub-brnoCeitec06/anat/sub-brnoCeitec06_space-other_T2star.nii.gz @@ -1 +1 @@ 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--- a/derivatives/data_preprocessed/sub-brnoUhb01/anat/sub-brnoUhb01_space-other_T2star.nii.gz +++ b/derivatives/data_preprocessed/sub-brnoUhb01/anat/sub-brnoUhb01_space-other_T2star.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s7533273--1946afa25df7f9e9617c52724e5932c070f67e3fa9ac311e600ad1b75804289a.nii.gz +/annex/objects/SHA256E-s7533285--ca625f7f51797fcffbdeb7416d859159184115b67e9d7fe12940d0f19a44907b.nii.gz diff --git a/derivatives/data_preprocessed/sub-brnoUhb01/dwi/sub-brnoUhb01_rec-average_dwi.json b/derivatives/data_preprocessed/sub-brnoUhb01/dwi/sub-brnoUhb01_rec-average_dwi.json new file mode 100644 index 0000000000..a218d9b38a --- /dev/null +++ b/derivatives/data_preprocessed/sub-brnoUhb01/dwi/sub-brnoUhb01_rec-average_dwi.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_dmri_moco", + "Version": "SCT v6.1", + "Description": "Mean image across directions after motion correction" + } + ] +} \ No newline at end of file diff --git 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"GeneratedBy": [ + { + "Name": "sct_dmri_moco", + "Version": "SCT v6.1", + "Description": "Mean image across directions after motion correction" + } + ] +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-brnoUhb03/anat/sub-brnoUhb03_space-other_T2star.nii.gz b/derivatives/data_preprocessed/sub-brnoUhb03/anat/sub-brnoUhb03_space-other_T2star.nii.gz index 2c3f6a8646..3b25108d31 100644 --- a/derivatives/data_preprocessed/sub-brnoUhb03/anat/sub-brnoUhb03_space-other_T2star.nii.gz +++ b/derivatives/data_preprocessed/sub-brnoUhb03/anat/sub-brnoUhb03_space-other_T2star.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s7221898--199a6d4c9afb4f2314d36a643eb7498e9eb72d8eafb6e0ca0021397ed05204ea.nii.gz +/annex/objects/SHA256E-s7221910--f7adb29368cb15e2cb5c22957bf7fdbbbe46fd40080dcca81e4b41be44be0532.nii.gz diff --git a/derivatives/data_preprocessed/sub-brnoUhb03/dwi/sub-brnoUhb03_rec-average_dwi.json b/derivatives/data_preprocessed/sub-brnoUhb03/dwi/sub-brnoUhb03_rec-average_dwi.json new file mode 100644 index 0000000000..a218d9b38a --- /dev/null +++ b/derivatives/data_preprocessed/sub-brnoUhb03/dwi/sub-brnoUhb03_rec-average_dwi.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_dmri_moco", + "Version": "SCT v6.1", + "Description": "Mean image across directions after motion correction" + } + ] +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-brnoUhb04/anat/sub-brnoUhb04_space-other_T2star.nii.gz b/derivatives/data_preprocessed/sub-brnoUhb04/anat/sub-brnoUhb04_space-other_T2star.nii.gz index d7cce4c7a5..8f98fe530f 100644 --- a/derivatives/data_preprocessed/sub-brnoUhb04/anat/sub-brnoUhb04_space-other_T2star.nii.gz +++ b/derivatives/data_preprocessed/sub-brnoUhb04/anat/sub-brnoUhb04_space-other_T2star.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s7435579--e8afe1c9b9b49563bfbbbac3df8ae2220b785c3ff32db1db1ba011d4e9da6311.nii.gz 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b/derivatives/data_preprocessed/sub-brnoUhb05/anat/sub-brnoUhb05_space-other_T2star.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s7332751--c9bed3c287d0ab0643f967d9a5b1a7df5b5c22d82af7aacd137685e93e9d592f.nii.gz +/annex/objects/SHA256E-s7332764--0c5ec873d86e4492aa3b398801a6e7a958e97a7e63a29ede6fc134ae9e84bd27.nii.gz diff --git a/derivatives/data_preprocessed/sub-brnoUhb05/dwi/sub-brnoUhb05_rec-average_dwi.json b/derivatives/data_preprocessed/sub-brnoUhb05/dwi/sub-brnoUhb05_rec-average_dwi.json new file mode 100644 index 0000000000..a218d9b38a --- /dev/null +++ b/derivatives/data_preprocessed/sub-brnoUhb05/dwi/sub-brnoUhb05_rec-average_dwi.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_dmri_moco", + "Version": "SCT v6.1", + "Description": "Mean image across directions after motion correction" + } + ] +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-brnoUhb06/anat/sub-brnoUhb06_space-other_T2star.nii.gz 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across directions after motion correction" + } + ] +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-brnoUhb07/anat/sub-brnoUhb07_space-other_T2star.nii.gz b/derivatives/data_preprocessed/sub-brnoUhb07/anat/sub-brnoUhb07_space-other_T2star.nii.gz index 3ec31a943b..5c8b908e4c 100644 --- a/derivatives/data_preprocessed/sub-brnoUhb07/anat/sub-brnoUhb07_space-other_T2star.nii.gz +++ b/derivatives/data_preprocessed/sub-brnoUhb07/anat/sub-brnoUhb07_space-other_T2star.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s7235187--94b0ff9591d4d7c475969e45ffbea3b8816d63d3466d1948d9072d1f4feb0fbe.nii.gz +/annex/objects/SHA256E-s7235199--85c20663f6b5de4f146017bec5a85bb68cb837cad4ea667b812e14f6a3084abe.nii.gz diff --git a/derivatives/data_preprocessed/sub-brnoUhb07/dwi/sub-brnoUhb07_rec-average_dwi.json b/derivatives/data_preprocessed/sub-brnoUhb07/dwi/sub-brnoUhb07_rec-average_dwi.json new file mode 100644 index 0000000000..a218d9b38a --- /dev/null +++ b/derivatives/data_preprocessed/sub-brnoUhb07/dwi/sub-brnoUhb07_rec-average_dwi.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_dmri_moco", + "Version": "SCT v6.1", + "Description": "Mean image across directions after motion correction" + } + ] +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-brnoUhb08/anat/sub-brnoUhb08_space-other_T2star.nii.gz b/derivatives/data_preprocessed/sub-brnoUhb08/anat/sub-brnoUhb08_space-other_T2star.nii.gz index 9bf5597288..38281ec389 100644 --- a/derivatives/data_preprocessed/sub-brnoUhb08/anat/sub-brnoUhb08_space-other_T2star.nii.gz +++ b/derivatives/data_preprocessed/sub-brnoUhb08/anat/sub-brnoUhb08_space-other_T2star.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s6979968--dab804eac4fca4743fa7ece8a97b5629fa5cd305d208f20ac6580fe58ae397f1.nii.gz +/annex/objects/SHA256E-s6979978--7741a004d51ddccb64034a5f06574d4796e9f2800ea006d3b4f0f60118ee456e.nii.gz diff --git a/derivatives/data_preprocessed/sub-brnoUhb08/dwi/sub-brnoUhb08_rec-average_dwi.json b/derivatives/data_preprocessed/sub-brnoUhb08/dwi/sub-brnoUhb08_rec-average_dwi.json new file mode 100644 index 0000000000..a218d9b38a --- /dev/null +++ b/derivatives/data_preprocessed/sub-brnoUhb08/dwi/sub-brnoUhb08_rec-average_dwi.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_dmri_moco", + "Version": "SCT v6.1", + "Description": "Mean image across directions after motion correction" + } + ] +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-cardiff01/anat/sub-cardiff01_space-other_T2star.nii.gz b/derivatives/data_preprocessed/sub-cardiff01/anat/sub-cardiff01_space-other_T2star.nii.gz index 9946886fe1..ddab573858 100644 --- a/derivatives/data_preprocessed/sub-cardiff01/anat/sub-cardiff01_space-other_T2star.nii.gz +++ b/derivatives/data_preprocessed/sub-cardiff01/anat/sub-cardiff01_space-other_T2star.nii.gz @@ -1 +1 @@ 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a/derivatives/data_preprocessed/sub-cardiff02/anat/sub-cardiff02_space-other_T2star.nii.gz +++ b/derivatives/data_preprocessed/sub-cardiff02/anat/sub-cardiff02_space-other_T2star.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s3787121--beb4adfb7c1d9a7beaa58a349ce5601493ad3538298377d653d222e7312ee6cc.nii.gz +/annex/objects/SHA256E-s3787138--cbf7f6f3e6028c47f6fe0137cd0600ce8c4bed4b9102d30a06b0333846f03b16.nii.gz diff --git a/derivatives/data_preprocessed/sub-cardiff02/dwi/sub-cardiff02_rec-average_dwi.json b/derivatives/data_preprocessed/sub-cardiff02/dwi/sub-cardiff02_rec-average_dwi.json new file mode 100644 index 0000000000..a218d9b38a --- /dev/null +++ b/derivatives/data_preprocessed/sub-cardiff02/dwi/sub-cardiff02_rec-average_dwi.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_dmri_moco", + "Version": "SCT v6.1", + "Description": "Mean image across directions after motion correction" + } + ] +} \ No newline at end of file diff --git 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b/derivatives/data_preprocessed/sub-cardiff06/anat/sub-cardiff06_space-other_T2star.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s3671366--f92c8461de1ecdb249a74ae9f574acccbbceb54dc9dacbdd38443905de1453f1.nii.gz +/annex/objects/SHA256E-s3671378--85f20386026e157eb02c1e5570fa9f7a7375d823762b84c506ed83f5a6f34914.nii.gz diff --git a/derivatives/data_preprocessed/sub-cardiff06/dwi/sub-cardiff06_rec-average_dwi.json b/derivatives/data_preprocessed/sub-cardiff06/dwi/sub-cardiff06_rec-average_dwi.json new file mode 100644 index 0000000000..a218d9b38a --- /dev/null +++ b/derivatives/data_preprocessed/sub-cardiff06/dwi/sub-cardiff06_rec-average_dwi.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_dmri_moco", + "Version": "SCT v6.1", + "Description": "Mean image across directions after motion correction" + } + ] +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-cmrra01/anat/sub-cmrra01_space-other_T2star.nii.gz 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b/derivatives/data_preprocessed/sub-cmrra02/dwi/sub-cmrra02_rec-average_dwi.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_dmri_moco", + "Version": "SCT v6.1", + "Description": "Mean image across directions after motion correction" + } + ] +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-cmrra03/anat/sub-cmrra03_space-other_T2star.nii.gz b/derivatives/data_preprocessed/sub-cmrra03/anat/sub-cmrra03_space-other_T2star.nii.gz index 8cdd132ad9..0e3576eb63 100644 --- a/derivatives/data_preprocessed/sub-cmrra03/anat/sub-cmrra03_space-other_T2star.nii.gz +++ b/derivatives/data_preprocessed/sub-cmrra03/anat/sub-cmrra03_space-other_T2star.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s4165905--cfb3e79167f648951f25860de8ed8f1bf53e656610fad19f3e6bf547cfcd9633.nii.gz +/annex/objects/SHA256E-s4165917--a56bc03bb3dd0ebb9ea43f66f216e085e359faaa292458f26041fd71c54a44f1.nii.gz diff --git 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a/derivatives/data_preprocessed/sub-cmrra05/anat/sub-cmrra05_space-other_T2star.nii.gz +++ b/derivatives/data_preprocessed/sub-cmrra05/anat/sub-cmrra05_space-other_T2star.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s4101495--13f65d2b7fc8559449d2c6f1eb55b2a8d2a83ed62e8fdafd4b3d58db615e7996.nii.gz +/annex/objects/SHA256E-s4101508--571fcec0ec323a4677a1fc8ff5edec3bdcd652eb77579a24683189ec0359638c.nii.gz diff --git a/derivatives/data_preprocessed/sub-cmrra05/dwi/sub-cmrra05_rec-average_dwi.json b/derivatives/data_preprocessed/sub-cmrra05/dwi/sub-cmrra05_rec-average_dwi.json new file mode 100644 index 0000000000..a218d9b38a --- /dev/null +++ b/derivatives/data_preprocessed/sub-cmrra05/dwi/sub-cmrra05_rec-average_dwi.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_dmri_moco", + "Version": "SCT v6.1", + "Description": "Mean image across directions after motion correction" + } + ] +} \ No newline at end of file diff --git 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0000000000..a218d9b38a --- /dev/null +++ b/derivatives/data_preprocessed/sub-cmrrb01/dwi/sub-cmrrb01_rec-average_dwi.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_dmri_moco", + "Version": "SCT v6.1", + "Description": "Mean image across directions after motion correction" + } + ] +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-cmrrb02/anat/sub-cmrrb02_space-other_T2star.nii.gz b/derivatives/data_preprocessed/sub-cmrrb02/anat/sub-cmrrb02_space-other_T2star.nii.gz index 1f7c6777e4..aeddec7608 100644 --- a/derivatives/data_preprocessed/sub-cmrrb02/anat/sub-cmrrb02_space-other_T2star.nii.gz +++ b/derivatives/data_preprocessed/sub-cmrrb02/anat/sub-cmrrb02_space-other_T2star.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s4017346--15bcbf6b7e8ea4d50ddba5ab9be2fd58e9dc221dbea363c1cba9deba8f37ee36.nii.gz +/annex/objects/SHA256E-s4017357--79688709db5698d26d1f6c17747d2fe5de93098ba61cdd9d232206e83757d9ce.nii.gz diff --git 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a/derivatives/data_preprocessed/sub-fslAchieva01/anat/sub-fslAchieva01_space-other_T2star.nii.gz b/derivatives/data_preprocessed/sub-fslAchieva01/anat/sub-fslAchieva01_space-other_T2star.nii.gz index 7e55abfcd3..d5730cd6a4 100644 --- a/derivatives/data_preprocessed/sub-fslAchieva01/anat/sub-fslAchieva01_space-other_T2star.nii.gz +++ b/derivatives/data_preprocessed/sub-fslAchieva01/anat/sub-fslAchieva01_space-other_T2star.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s2982608--fa81cb29ed3e0fef0384ee75a9c6041eb36fefffe386fd1555e3afa2c05629bc.nii.gz +/annex/objects/SHA256E-s2982621--006f4d5749813c074ad8f8226454c36873bdd3f8700c06897e821ba9226b4695.nii.gz diff --git a/derivatives/data_preprocessed/sub-fslAchieva01/dwi/sub-fslAchieva01_rec-average_dwi.json b/derivatives/data_preprocessed/sub-fslAchieva01/dwi/sub-fslAchieva01_rec-average_dwi.json new file mode 100644 index 0000000000..a218d9b38a --- /dev/null +++ b/derivatives/data_preprocessed/sub-fslAchieva01/dwi/sub-fslAchieva01_rec-average_dwi.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_dmri_moco", + "Version": "SCT v6.1", + "Description": "Mean image across directions after motion correction" + } + ] +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-fslAchieva02/anat/sub-fslAchieva02_space-other_T2star.nii.gz b/derivatives/data_preprocessed/sub-fslAchieva02/anat/sub-fslAchieva02_space-other_T2star.nii.gz index 803a661f6a..a75c3fb24e 100644 --- a/derivatives/data_preprocessed/sub-fslAchieva02/anat/sub-fslAchieva02_space-other_T2star.nii.gz +++ b/derivatives/data_preprocessed/sub-fslAchieva02/anat/sub-fslAchieva02_space-other_T2star.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s2349343--e3ac82c5dc9109dcec8f6a240b2ee10b12d655aecf2f7c369960c5b772de8a3a.nii.gz +/annex/objects/SHA256E-s2349355--a02dcf7271ebba5f21ac6ca6db92d0b30d280a8cf6c2bb86b7094f187e9e9b36.nii.gz diff --git 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c4828111d0..0e65b97bb8 100644 --- a/derivatives/data_preprocessed/sub-fslAchieva04/anat/sub-fslAchieva04_space-other_T2star.nii.gz +++ b/derivatives/data_preprocessed/sub-fslAchieva04/anat/sub-fslAchieva04_space-other_T2star.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s2300674--68ec23c1aae6f8029d6dadf8103039faa97cd341312c27413b92dd9a17353472.nii.gz +/annex/objects/SHA256E-s2300687--b8e41d52835b2f9de8384cad5315c3ce24a43ca4d0af6b3823f52837e06c7172.nii.gz diff --git a/derivatives/data_preprocessed/sub-fslAchieva04/dwi/sub-fslAchieva04_rec-average_dwi.json b/derivatives/data_preprocessed/sub-fslAchieva04/dwi/sub-fslAchieva04_rec-average_dwi.json new file mode 100644 index 0000000000..a218d9b38a --- /dev/null +++ b/derivatives/data_preprocessed/sub-fslAchieva04/dwi/sub-fslAchieva04_rec-average_dwi.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_dmri_moco", + "Version": "SCT v6.1", + "Description": "Mean image across directions after motion correction" + } + ] +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-fslAchieva05/anat/sub-fslAchieva05_space-other_T2star.nii.gz b/derivatives/data_preprocessed/sub-fslAchieva05/anat/sub-fslAchieva05_space-other_T2star.nii.gz index ff3926e884..143758e472 100644 --- a/derivatives/data_preprocessed/sub-fslAchieva05/anat/sub-fslAchieva05_space-other_T2star.nii.gz +++ b/derivatives/data_preprocessed/sub-fslAchieva05/anat/sub-fslAchieva05_space-other_T2star.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s2087684--1154346d4aa3b44c4c22d836af43e9af0642158282385611cd6ed9ffcc3e3d98.nii.gz +/annex/objects/SHA256E-s2087696--bc6ea754752864d6595d2062d26cc47857e99702e0b595c477cef09198ca71ac.nii.gz diff --git a/derivatives/data_preprocessed/sub-fslAchieva05/dwi/sub-fslAchieva05_rec-average_dwi.json b/derivatives/data_preprocessed/sub-fslAchieva05/dwi/sub-fslAchieva05_rec-average_dwi.json new file mode 100644 index 0000000000..a218d9b38a --- /dev/null +++ b/derivatives/data_preprocessed/sub-fslAchieva05/dwi/sub-fslAchieva05_rec-average_dwi.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_dmri_moco", + "Version": "SCT v6.1", + "Description": "Mean image across directions after motion correction" + } + ] +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-fslAchieva06/anat/sub-fslAchieva06_space-other_T2star.nii.gz b/derivatives/data_preprocessed/sub-fslAchieva06/anat/sub-fslAchieva06_space-other_T2star.nii.gz index 1f6c4a7c9e..b5db7988ff 100644 --- a/derivatives/data_preprocessed/sub-fslAchieva06/anat/sub-fslAchieva06_space-other_T2star.nii.gz +++ b/derivatives/data_preprocessed/sub-fslAchieva06/anat/sub-fslAchieva06_space-other_T2star.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s2377166--27232e2ff2a397038d9af5d0e1978418ea0f7bcaf4be9057f1b3c855d2b4b16d.nii.gz +/annex/objects/SHA256E-s2377178--6791c4f6ec34ff0eb30c1dc8bc15c07cee2c31f4e70f31d675c8ef8c713141ac.nii.gz diff --git a/derivatives/data_preprocessed/sub-fslAchieva06/dwi/sub-fslAchieva06_rec-average_dwi.json b/derivatives/data_preprocessed/sub-fslAchieva06/dwi/sub-fslAchieva06_rec-average_dwi.json new file mode 100644 index 0000000000..a218d9b38a --- /dev/null +++ b/derivatives/data_preprocessed/sub-fslAchieva06/dwi/sub-fslAchieva06_rec-average_dwi.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_dmri_moco", + "Version": "SCT v6.1", + "Description": "Mean image across directions after motion correction" + } + ] +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-fslPrisma01/anat/sub-fslPrisma01_space-other_T2star.nii.gz b/derivatives/data_preprocessed/sub-fslPrisma01/anat/sub-fslPrisma01_space-other_T2star.nii.gz index 0a7c640bdf..485cf7a716 100644 --- a/derivatives/data_preprocessed/sub-fslPrisma01/anat/sub-fslPrisma01_space-other_T2star.nii.gz +++ b/derivatives/data_preprocessed/sub-fslPrisma01/anat/sub-fslPrisma01_space-other_T2star.nii.gz @@ -1 +1 @@ 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039ddbfd0e..8d555a183b 100644 --- a/derivatives/data_preprocessed/sub-juntendo750w02/anat/sub-juntendo750w02_space-other_T2star.nii.gz +++ b/derivatives/data_preprocessed/sub-juntendo750w02/anat/sub-juntendo750w02_space-other_T2star.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s5008229--abaaafd0be4773cd4b5c74240fce90697bb725a793df4d23d32551314f6b10df.nii.gz +/annex/objects/SHA256E-s5008241--18a9d4bc4010c4f92d9829fc93b14da23f9fdac51844a7f98ca7af4488680c1a.nii.gz diff --git a/derivatives/data_preprocessed/sub-juntendo750w02/dwi/sub-juntendo750w02_rec-average_dwi.json b/derivatives/data_preprocessed/sub-juntendo750w02/dwi/sub-juntendo750w02_rec-average_dwi.json new file mode 100644 index 0000000000..a218d9b38a --- /dev/null +++ b/derivatives/data_preprocessed/sub-juntendo750w02/dwi/sub-juntendo750w02_rec-average_dwi.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_dmri_moco", + "Version": "SCT v6.1", + "Description": "Mean image across directions after motion correction" + } + ] +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-juntendo750w03/anat/sub-juntendo750w03_space-other_T2star.nii.gz b/derivatives/data_preprocessed/sub-juntendo750w03/anat/sub-juntendo750w03_space-other_T2star.nii.gz index a28cda7acf..3636a439b3 100644 --- a/derivatives/data_preprocessed/sub-juntendo750w03/anat/sub-juntendo750w03_space-other_T2star.nii.gz +++ b/derivatives/data_preprocessed/sub-juntendo750w03/anat/sub-juntendo750w03_space-other_T2star.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s5220966--9212eb314f015c3376124c077d8b3531589b9cc821cecf607b98aae998b997e3.nii.gz +/annex/objects/SHA256E-s5220978--4d4c438ad41de7cca74849d05d38227c6ceaac8791e01acb4711ab321511f50c.nii.gz diff --git a/derivatives/data_preprocessed/sub-juntendo750w03/dwi/sub-juntendo750w03_rec-average_dwi.json b/derivatives/data_preprocessed/sub-juntendo750w03/dwi/sub-juntendo750w03_rec-average_dwi.json new file mode 100644 index 0000000000..a218d9b38a --- /dev/null +++ b/derivatives/data_preprocessed/sub-juntendo750w03/dwi/sub-juntendo750w03_rec-average_dwi.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_dmri_moco", + "Version": "SCT v6.1", + "Description": "Mean image across directions after motion correction" + } + ] +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-juntendo750w04/anat/sub-juntendo750w04_space-other_T2star.nii.gz b/derivatives/data_preprocessed/sub-juntendo750w04/anat/sub-juntendo750w04_space-other_T2star.nii.gz index 00d77c7e1d..0ccd2a1c69 100644 --- a/derivatives/data_preprocessed/sub-juntendo750w04/anat/sub-juntendo750w04_space-other_T2star.nii.gz +++ b/derivatives/data_preprocessed/sub-juntendo750w04/anat/sub-juntendo750w04_space-other_T2star.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s5395941--a90319f00672982fd52a3455de556aeb688020d9bfb3d2a1970ade81833996f1.nii.gz +/annex/objects/SHA256E-s5395953--dd49e883e0f13df67614f2cb54e14daf9d63d82e64ae798f942d826d068426b4.nii.gz diff --git a/derivatives/data_preprocessed/sub-juntendo750w04/dwi/sub-juntendo750w04_rec-average_dwi.json b/derivatives/data_preprocessed/sub-juntendo750w04/dwi/sub-juntendo750w04_rec-average_dwi.json new file mode 100644 index 0000000000..a218d9b38a --- /dev/null +++ b/derivatives/data_preprocessed/sub-juntendo750w04/dwi/sub-juntendo750w04_rec-average_dwi.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_dmri_moco", + "Version": "SCT v6.1", + "Description": "Mean image across directions after motion correction" + } + ] +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-juntendo750w05/anat/sub-juntendo750w05_space-other_T2star.nii.gz b/derivatives/data_preprocessed/sub-juntendo750w05/anat/sub-juntendo750w05_space-other_T2star.nii.gz index ba713f7f3c..7893620f25 100644 --- a/derivatives/data_preprocessed/sub-juntendo750w05/anat/sub-juntendo750w05_space-other_T2star.nii.gz +++ b/derivatives/data_preprocessed/sub-juntendo750w05/anat/sub-juntendo750w05_space-other_T2star.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s5095244--cd6dddb44eb63661b6b87b6d6fe431fbd18c97a4a9eb3024cc7c5df171e6b5eb.nii.gz +/annex/objects/SHA256E-s5095256--4fa556eb9f67c55b8f2d10211496e7879a817b433e31044871cc799927a01054.nii.gz diff --git a/derivatives/data_preprocessed/sub-juntendo750w05/dwi/sub-juntendo750w05_rec-average_dwi.json b/derivatives/data_preprocessed/sub-juntendo750w05/dwi/sub-juntendo750w05_rec-average_dwi.json new file mode 100644 index 0000000000..a218d9b38a --- /dev/null +++ b/derivatives/data_preprocessed/sub-juntendo750w05/dwi/sub-juntendo750w05_rec-average_dwi.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_dmri_moco", + "Version": "SCT v6.1", + "Description": "Mean image across directions after motion correction" + } + ] +} \ No newline at end of file diff --git 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b/derivatives/data_preprocessed/sub-juntendo750w06/dwi/sub-juntendo750w06_rec-average_dwi.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_dmri_moco", + "Version": "SCT v6.1", + "Description": "Mean image across directions after motion correction" + } + ] +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-mgh01/anat/sub-mgh01_space-other_T2star.nii.gz b/derivatives/data_preprocessed/sub-mgh01/anat/sub-mgh01_space-other_T2star.nii.gz index 140b3be477..5d378956df 100644 --- a/derivatives/data_preprocessed/sub-mgh01/anat/sub-mgh01_space-other_T2star.nii.gz +++ b/derivatives/data_preprocessed/sub-mgh01/anat/sub-mgh01_space-other_T2star.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s3707542--52a1a2c803f1d80e72e32dcb3d8754b8a4057db0c87434dfea76f632f82dd67f.nii.gz +/annex/objects/SHA256E-s3707560--94b73c1f28462a34c4874ed4c4a8ed3507e0f35c1dd96dfbc6ef2f5c9a3a0571.nii.gz diff --git a/derivatives/data_preprocessed/sub-mgh01/dwi/sub-mgh01_rec-average_dwi.json 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b/derivatives/data_preprocessed/sub-mgh03/anat/sub-mgh03_space-other_T2star.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s3732114--bd6f1e1cd37076d7c58bc1f492c89014cc57f6221454f8fe26bb3dc219416474.nii.gz +/annex/objects/SHA256E-s3732133--c66761b07dcb31f245dc05d5bc0b5d5367e3482e4219f43e8f029aae29b79f19.nii.gz diff --git a/derivatives/data_preprocessed/sub-mgh03/dwi/sub-mgh03_rec-average_dwi.json b/derivatives/data_preprocessed/sub-mgh03/dwi/sub-mgh03_rec-average_dwi.json new file mode 100644 index 0000000000..a218d9b38a --- /dev/null +++ b/derivatives/data_preprocessed/sub-mgh03/dwi/sub-mgh03_rec-average_dwi.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_dmri_moco", + "Version": "SCT v6.1", + "Description": "Mean image across directions after motion correction" + } + ] +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-mgh04/anat/sub-mgh04_space-other_T2star.nii.gz b/derivatives/data_preprocessed/sub-mgh04/anat/sub-mgh04_space-other_T2star.nii.gz index b1684501b3..efd0289c0a 100644 --- a/derivatives/data_preprocessed/sub-mgh04/anat/sub-mgh04_space-other_T2star.nii.gz +++ b/derivatives/data_preprocessed/sub-mgh04/anat/sub-mgh04_space-other_T2star.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s3892618--28627cd52d31b6eff5546e71f29879175c9aaa5ab58f1285b42e4b0b51ff9267.nii.gz +/annex/objects/SHA256E-s3892635--4717ca6dd9137f51396a9a961cd393a54381429beeb72ba7757c1b36a0c9420b.nii.gz diff --git a/derivatives/data_preprocessed/sub-mgh04/dwi/sub-mgh04_rec-average_dwi.json b/derivatives/data_preprocessed/sub-mgh04/dwi/sub-mgh04_rec-average_dwi.json new file mode 100644 index 0000000000..a218d9b38a --- /dev/null +++ b/derivatives/data_preprocessed/sub-mgh04/dwi/sub-mgh04_rec-average_dwi.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_dmri_moco", + "Version": "SCT v6.1", + "Description": "Mean image across directions after motion correction" + } + ] +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-mgh05/anat/sub-mgh05_space-other_T2star.nii.gz b/derivatives/data_preprocessed/sub-mgh05/anat/sub-mgh05_space-other_T2star.nii.gz index 8c1ae3a796..9047789b0e 100644 --- a/derivatives/data_preprocessed/sub-mgh05/anat/sub-mgh05_space-other_T2star.nii.gz +++ b/derivatives/data_preprocessed/sub-mgh05/anat/sub-mgh05_space-other_T2star.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s4191068--5b8480b46da5b65a101cf5737f7ef3ad3cf89db00c77e1ebc71d1c06156da2e8.nii.gz +/annex/objects/SHA256E-s4191080--c8848990c34f9eb9e6ba33dbb0af143345115543449da106506284e1bb9453e6.nii.gz diff --git a/derivatives/data_preprocessed/sub-mgh05/dwi/sub-mgh05_rec-average_dwi.json b/derivatives/data_preprocessed/sub-mgh05/dwi/sub-mgh05_rec-average_dwi.json new file mode 100644 index 0000000000..a218d9b38a --- /dev/null +++ b/derivatives/data_preprocessed/sub-mgh05/dwi/sub-mgh05_rec-average_dwi.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_dmri_moco", + "Version": "SCT 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b/derivatives/data_preprocessed/sub-mgh06/dwi/sub-mgh06_rec-average_dwi.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_dmri_moco", + "Version": "SCT v6.1", + "Description": "Mean image across directions after motion correction" + } + ] +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-milan01/anat/sub-milan01_space-other_T2star.nii.gz b/derivatives/data_preprocessed/sub-milan01/anat/sub-milan01_space-other_T2star.nii.gz index 1ffa8d5aec..4fdb91988d 100644 --- a/derivatives/data_preprocessed/sub-milan01/anat/sub-milan01_space-other_T2star.nii.gz +++ b/derivatives/data_preprocessed/sub-milan01/anat/sub-milan01_space-other_T2star.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s3984412--29973b593ef75edd9c015fe378bda5f578aaa69a64b14d6abadef890e79592dc.nii.gz +/annex/objects/SHA256E-s3984424--d4f329df3d6bf8fbb106dd3320c5c6247a3e908fd7315682846c13ea83163644.nii.gz diff --git a/derivatives/data_preprocessed/sub-milan01/dwi/sub-milan01_rec-average_dwi.json 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b/derivatives/data_preprocessed/sub-milan03/anat/sub-milan03_space-other_T2star.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s3890203--faebfb910e42bb9744cd95e7fc2293fb63add63ebbbe9767a4f16bee4bd1458c.nii.gz +/annex/objects/SHA256E-s3890215--e00351681b32f9ba3d1e9b104b4d8c718e834b19ff099d6f3ac33225a476da39.nii.gz diff --git a/derivatives/data_preprocessed/sub-milan03/dwi/sub-milan03_rec-average_dwi.json b/derivatives/data_preprocessed/sub-milan03/dwi/sub-milan03_rec-average_dwi.json new file mode 100644 index 0000000000..a218d9b38a --- /dev/null +++ b/derivatives/data_preprocessed/sub-milan03/dwi/sub-milan03_rec-average_dwi.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_dmri_moco", + "Version": "SCT v6.1", + "Description": "Mean image across directions after motion correction" + } + ] +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-milan04/anat/sub-milan04_space-other_T2star.nii.gz b/derivatives/data_preprocessed/sub-milan04/anat/sub-milan04_space-other_T2star.nii.gz index 94767c1776..233458c1a9 100644 --- a/derivatives/data_preprocessed/sub-milan04/anat/sub-milan04_space-other_T2star.nii.gz +++ b/derivatives/data_preprocessed/sub-milan04/anat/sub-milan04_space-other_T2star.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s3781047--f62d0003699798c36a963eb897d38c2e927fae84e05cb5b8ec64b52515a2ca58.nii.gz +/annex/objects/SHA256E-s3781059--bfe772cf0622b91be4e48916e7596055397d060d5f2d7d49b8a6b116016c7ef3.nii.gz diff --git a/derivatives/data_preprocessed/sub-milan04/dwi/sub-milan04_rec-average_dwi.json b/derivatives/data_preprocessed/sub-milan04/dwi/sub-milan04_rec-average_dwi.json new file mode 100644 index 0000000000..a218d9b38a --- /dev/null +++ b/derivatives/data_preprocessed/sub-milan04/dwi/sub-milan04_rec-average_dwi.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_dmri_moco", + "Version": "SCT v6.1", + "Description": "Mean image across directions after motion correction" + } + ] +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-milan05/anat/sub-milan05_space-other_T2star.nii.gz b/derivatives/data_preprocessed/sub-milan05/anat/sub-milan05_space-other_T2star.nii.gz index c7c723f987..0fa9d5662c 100644 --- a/derivatives/data_preprocessed/sub-milan05/anat/sub-milan05_space-other_T2star.nii.gz +++ b/derivatives/data_preprocessed/sub-milan05/anat/sub-milan05_space-other_T2star.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s3824007--a90f789cd197646fe0c6a5c389868feb4b13f4a28b19001dc1ca8d0feed13676.nii.gz +/annex/objects/SHA256E-s3824022--df104348e1e03d4d81adea447b5683423ed65082912ceae657c4e0153ee2b088.nii.gz diff --git a/derivatives/data_preprocessed/sub-milan05/dwi/sub-milan05_rec-average_dwi.json b/derivatives/data_preprocessed/sub-milan05/dwi/sub-milan05_rec-average_dwi.json new file mode 100644 index 0000000000..a218d9b38a --- /dev/null +++ b/derivatives/data_preprocessed/sub-milan05/dwi/sub-milan05_rec-average_dwi.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_dmri_moco", + "Version": "SCT v6.1", + "Description": "Mean image across directions after motion correction" + } + ] +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-milan06/anat/sub-milan06_space-other_T2star.nii.gz b/derivatives/data_preprocessed/sub-milan06/anat/sub-milan06_space-other_T2star.nii.gz index 22422d9036..c4ea17af62 100644 --- a/derivatives/data_preprocessed/sub-milan06/anat/sub-milan06_space-other_T2star.nii.gz +++ b/derivatives/data_preprocessed/sub-milan06/anat/sub-milan06_space-other_T2star.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s4602373--b0bc0c9b86a9fbc581f282a5399742d9029ce28689767a73ddececee20302e88.nii.gz +/annex/objects/SHA256E-s4602385--2852d9a5810dae5e2c06d094451c7f07a6c807a08470d8d7933ac4c255db3688.nii.gz diff --git 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-/annex/objects/SHA256E-s4382154--483644027f920be86b2a7d4a36f7ec2d53a760f690636aca0d1e6d37f3ffa530.nii.gz +/annex/objects/SHA256E-s4382166--76bcbd606e753fdcfb3a22128f7af8f8f6e15874593c5757eb65fd05487ad04c.nii.gz diff --git a/derivatives/data_preprocessed/sub-milan07/dwi/sub-milan07_rec-average_dwi.json b/derivatives/data_preprocessed/sub-milan07/dwi/sub-milan07_rec-average_dwi.json new file mode 100644 index 0000000000..a218d9b38a --- /dev/null +++ b/derivatives/data_preprocessed/sub-milan07/dwi/sub-milan07_rec-average_dwi.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_dmri_moco", + "Version": "SCT v6.1", + "Description": "Mean image across directions after motion correction" + } + ] +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-mniPilot1/anat/sub-mniPilot1_space-other_T2star.nii.gz b/derivatives/data_preprocessed/sub-mniPilot1/anat/sub-mniPilot1_space-other_T2star.nii.gz index 08f2c63eec..420ba9f7d2 100644 --- a/derivatives/data_preprocessed/sub-mniPilot1/anat/sub-mniPilot1_space-other_T2star.nii.gz +++ b/derivatives/data_preprocessed/sub-mniPilot1/anat/sub-mniPilot1_space-other_T2star.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s3652612--ce1e116f4bf5186da5bec7ab0f0c88dd35052c20bafa60589958e19578de3a4c.nii.gz +/annex/objects/SHA256E-s3652624--93f2e672fdc18732f86061ea621bbf16c580f0d1b0e835b80183f43253cc9adf.nii.gz diff --git a/derivatives/data_preprocessed/sub-mniPilot1/dwi/sub-mniPilot1_rec-average_dwi.json b/derivatives/data_preprocessed/sub-mniPilot1/dwi/sub-mniPilot1_rec-average_dwi.json new file mode 100644 index 0000000000..a218d9b38a --- /dev/null +++ b/derivatives/data_preprocessed/sub-mniPilot1/dwi/sub-mniPilot1_rec-average_dwi.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_dmri_moco", + "Version": "SCT v6.1", + "Description": "Mean image across directions after motion correction" + } + ] +} \ No newline at end of file diff --git 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"Version": "SCT v6.1", + "Description": "Mean image across directions after motion correction" + } + ] +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-mniS02/anat/sub-mniS02_space-other_T2star.nii.gz b/derivatives/data_preprocessed/sub-mniS02/anat/sub-mniS02_space-other_T2star.nii.gz index 27fe844fe1..9073cb0500 100644 --- a/derivatives/data_preprocessed/sub-mniS02/anat/sub-mniS02_space-other_T2star.nii.gz +++ b/derivatives/data_preprocessed/sub-mniS02/anat/sub-mniS02_space-other_T2star.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s4074779--71486523905092876e83ff175e29a7486385e3c906ba17e27cee23e17bc13801.nii.gz +/annex/objects/SHA256E-s4074792--656229ed0844213e24c75c10380667cd4fa93ca8f89e7a6e64430e8316e88b0b.nii.gz diff --git a/derivatives/data_preprocessed/sub-mniS02/dwi/sub-mniS02_rec-average_dwi.json b/derivatives/data_preprocessed/sub-mniS02/dwi/sub-mniS02_rec-average_dwi.json new file mode 100644 index 0000000000..a218d9b38a --- /dev/null +++ b/derivatives/data_preprocessed/sub-mniS02/dwi/sub-mniS02_rec-average_dwi.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_dmri_moco", + "Version": "SCT v6.1", + "Description": "Mean image across directions after motion correction" + } + ] +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-mniS03/anat/sub-mniS03_space-other_T2star.nii.gz b/derivatives/data_preprocessed/sub-mniS03/anat/sub-mniS03_space-other_T2star.nii.gz index 42c89628f6..425bc5d712 100644 --- a/derivatives/data_preprocessed/sub-mniS03/anat/sub-mniS03_space-other_T2star.nii.gz +++ b/derivatives/data_preprocessed/sub-mniS03/anat/sub-mniS03_space-other_T2star.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s3819041--93ed780612b70ff04e1a72e4897dab19180d8674a9f2238b90a437258a6af44b.nii.gz +/annex/objects/SHA256E-s3819053--f192fbfc47f80b6d66cf40015c3e662c44e68a3e70963ed9264478d58ca0f616.nii.gz diff --git a/derivatives/data_preprocessed/sub-mniS03/dwi/sub-mniS03_rec-average_dwi.json 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b/derivatives/data_preprocessed/sub-mniS05/anat/sub-mniS05_space-other_T2star.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s3845255--e4da229835b4b9cb69323c09b36ff22af2411a70d3f307a68c5370a8b1431269.nii.gz +/annex/objects/SHA256E-s3845267--28a2e3260d7dc6f00d8fe815ce1149f04544c63b20114d26bd7ae078fd13061e.nii.gz diff --git a/derivatives/data_preprocessed/sub-mniS05/dwi/sub-mniS05_rec-average_dwi.json b/derivatives/data_preprocessed/sub-mniS05/dwi/sub-mniS05_rec-average_dwi.json new file mode 100644 index 0000000000..a218d9b38a --- /dev/null +++ b/derivatives/data_preprocessed/sub-mniS05/dwi/sub-mniS05_rec-average_dwi.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_dmri_moco", + "Version": "SCT v6.1", + "Description": "Mean image across directions after motion correction" + } + ] +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-mniS06/anat/sub-mniS06_space-other_T2star.nii.gz 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correction" + } + ] +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-mniS07/anat/sub-mniS07_space-other_T2star.nii.gz b/derivatives/data_preprocessed/sub-mniS07/anat/sub-mniS07_space-other_T2star.nii.gz index 4d14a36fc7..610eb0ef87 100644 --- a/derivatives/data_preprocessed/sub-mniS07/anat/sub-mniS07_space-other_T2star.nii.gz +++ b/derivatives/data_preprocessed/sub-mniS07/anat/sub-mniS07_space-other_T2star.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s4320550--6264a9a8a9d1f4d84f86393d0e4009ecb69f45d1743e5cf005dbe5bd3713282e.nii.gz +/annex/objects/SHA256E-s4320562--db054d75923f38f49715f5bbb74f0fba98471ebc63248edb491a1f4803540c31.nii.gz diff --git a/derivatives/data_preprocessed/sub-mniS07/dwi/sub-mniS07_rec-average_dwi.json b/derivatives/data_preprocessed/sub-mniS07/dwi/sub-mniS07_rec-average_dwi.json new file mode 100644 index 0000000000..a218d9b38a --- /dev/null +++ b/derivatives/data_preprocessed/sub-mniS07/dwi/sub-mniS07_rec-average_dwi.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_dmri_moco", + "Version": "SCT v6.1", + "Description": "Mean image across directions after motion correction" + } + ] +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-mniS08/anat/sub-mniS08_space-other_T2star.nii.gz b/derivatives/data_preprocessed/sub-mniS08/anat/sub-mniS08_space-other_T2star.nii.gz index 04f78d632e..c59a6bbc91 100644 --- a/derivatives/data_preprocessed/sub-mniS08/anat/sub-mniS08_space-other_T2star.nii.gz +++ b/derivatives/data_preprocessed/sub-mniS08/anat/sub-mniS08_space-other_T2star.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s3631521--910f2c6c6f61b7c45c69a1e55d0b4d5cb3f30696dd8223d7be35bf0fec92f133.nii.gz +/annex/objects/SHA256E-s3631533--c301c98902cea97b2b893f0b76bf669aef1bed28e5cc8db012e4e01e4602f399.nii.gz diff --git a/derivatives/data_preprocessed/sub-mniS08/dwi/sub-mniS08_rec-average_dwi.json b/derivatives/data_preprocessed/sub-mniS08/dwi/sub-mniS08_rec-average_dwi.json new file mode 100644 index 0000000000..a218d9b38a --- /dev/null +++ b/derivatives/data_preprocessed/sub-mniS08/dwi/sub-mniS08_rec-average_dwi.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_dmri_moco", + "Version": "SCT v6.1", + "Description": "Mean image across directions after motion correction" + } + ] +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-mniS09/anat/sub-mniS09_space-other_T2star.nii.gz b/derivatives/data_preprocessed/sub-mniS09/anat/sub-mniS09_space-other_T2star.nii.gz index 2c14580767..914ba4d832 100644 --- a/derivatives/data_preprocessed/sub-mniS09/anat/sub-mniS09_space-other_T2star.nii.gz +++ b/derivatives/data_preprocessed/sub-mniS09/anat/sub-mniS09_space-other_T2star.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s3941540--1dc1bc3be0c39d86902a69750c41c5d26e9723e8e67d51c18517277bcae983d0.nii.gz +/annex/objects/SHA256E-s3941556--50f58d9976487ac9daaf22a43a975dac20bf43e3a739b14e066a8cf84cfee91b.nii.gz diff --git 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98a7cc0d1f..1f4cdbe806 100644 --- a/derivatives/data_preprocessed/sub-mountSinai02/anat/sub-mountSinai02_space-other_T2star.nii.gz +++ b/derivatives/data_preprocessed/sub-mountSinai02/anat/sub-mountSinai02_space-other_T2star.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s4547356--7574b09f534b1c679ba782072b1e49ed2cce8a611e17a4282c74823c649a743e.nii.gz +/annex/objects/SHA256E-s4547368--ad866d3ecd644f3071a9752d2bd9b1df25eec40c87689919aaec220e84816721.nii.gz diff --git a/derivatives/data_preprocessed/sub-mountSinai02/dwi/sub-mountSinai02_rec-average_dwi.json b/derivatives/data_preprocessed/sub-mountSinai02/dwi/sub-mountSinai02_rec-average_dwi.json new file mode 100644 index 0000000000..a218d9b38a --- /dev/null +++ b/derivatives/data_preprocessed/sub-mountSinai02/dwi/sub-mountSinai02_rec-average_dwi.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_dmri_moco", + "Version": "SCT v6.1", + "Description": "Mean image across directions after motion correction" + } + ] +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-mountSinai03/anat/sub-mountSinai03_space-other_T2star.nii.gz b/derivatives/data_preprocessed/sub-mountSinai03/anat/sub-mountSinai03_space-other_T2star.nii.gz index f1b2ab9c36..2a8e0491eb 100644 --- a/derivatives/data_preprocessed/sub-mountSinai03/anat/sub-mountSinai03_space-other_T2star.nii.gz +++ b/derivatives/data_preprocessed/sub-mountSinai03/anat/sub-mountSinai03_space-other_T2star.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s4463293--fa2a1a5a9465de46c870f16eb6d81c5b3796c8fba2c21471c1a7dff21fa4dc36.nii.gz +/annex/objects/SHA256E-s4463305--26ac6503f1ddf1a3f01082e40842482dc4fc5fa1f552b459a32f07d73a065a39.nii.gz diff --git a/derivatives/data_preprocessed/sub-mountSinai03/dwi/sub-mountSinai03_rec-average_dwi.json b/derivatives/data_preprocessed/sub-mountSinai03/dwi/sub-mountSinai03_rec-average_dwi.json new file mode 100644 index 0000000000..a218d9b38a --- /dev/null +++ b/derivatives/data_preprocessed/sub-mountSinai03/dwi/sub-mountSinai03_rec-average_dwi.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_dmri_moco", + "Version": "SCT v6.1", + "Description": "Mean image across directions after motion correction" + } + ] +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-mountSinai04/anat/sub-mountSinai04_space-other_T2star.nii.gz b/derivatives/data_preprocessed/sub-mountSinai04/anat/sub-mountSinai04_space-other_T2star.nii.gz index ef57393a45..6ebb583f5f 100644 --- a/derivatives/data_preprocessed/sub-mountSinai04/anat/sub-mountSinai04_space-other_T2star.nii.gz +++ b/derivatives/data_preprocessed/sub-mountSinai04/anat/sub-mountSinai04_space-other_T2star.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s4288149--6157c99865c585684c1f439ba7ade7d171c064181da79c0430cd7000861a794c.nii.gz +/annex/objects/SHA256E-s4288161--66eccb1ce24101e336da9c6f786bda2de9a04686d8de35e963a4fa790e916e43.nii.gz diff --git 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c52a24f33f..ca20563fc7 100644 --- a/derivatives/data_preprocessed/sub-mountSinai06/anat/sub-mountSinai06_space-other_T2star.nii.gz +++ b/derivatives/data_preprocessed/sub-mountSinai06/anat/sub-mountSinai06_space-other_T2star.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s4656061--a4448822d9946b77e835ea2461604a051436d6d473f4aed8dff1f72096a19635.nii.gz +/annex/objects/SHA256E-s4656074--7010f0e15589f7792b7875b76f4ed25b5085f349b4bd0400c0762fc517667325.nii.gz diff --git a/derivatives/data_preprocessed/sub-mountSinai06/dwi/sub-mountSinai06_rec-average_dwi.json b/derivatives/data_preprocessed/sub-mountSinai06/dwi/sub-mountSinai06_rec-average_dwi.json new file mode 100644 index 0000000000..a218d9b38a --- /dev/null +++ b/derivatives/data_preprocessed/sub-mountSinai06/dwi/sub-mountSinai06_rec-average_dwi.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_dmri_moco", + "Version": "SCT v6.1", + "Description": "Mean image across directions after motion correction" + } + ] +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-mpicbs01/anat/sub-mpicbs01_space-other_T2star.nii.gz b/derivatives/data_preprocessed/sub-mpicbs01/anat/sub-mpicbs01_space-other_T2star.nii.gz index 64f8f88783..21761b8e8f 100644 --- a/derivatives/data_preprocessed/sub-mpicbs01/anat/sub-mpicbs01_space-other_T2star.nii.gz +++ b/derivatives/data_preprocessed/sub-mpicbs01/anat/sub-mpicbs01_space-other_T2star.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s3873378--5d72fe891afdfd8b9d7d80f02e694aa5d72fe856cdbe942cb04243750c30b4aa.nii.gz +/annex/objects/SHA256E-s3873390--c8457e0515597af7e00ba3c0d007e4076b53387f0b60b58a89ff4fb5b706f1aa.nii.gz diff --git a/derivatives/data_preprocessed/sub-mpicbs01/dwi/sub-mpicbs01_rec-average_dwi.json b/derivatives/data_preprocessed/sub-mpicbs01/dwi/sub-mpicbs01_rec-average_dwi.json new file mode 100644 index 0000000000..a218d9b38a --- /dev/null +++ b/derivatives/data_preprocessed/sub-mpicbs01/dwi/sub-mpicbs01_rec-average_dwi.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_dmri_moco", + "Version": "SCT v6.1", + "Description": "Mean image across directions after motion correction" + } + ] +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-mpicbs02/anat/sub-mpicbs02_space-other_T2star.nii.gz b/derivatives/data_preprocessed/sub-mpicbs02/anat/sub-mpicbs02_space-other_T2star.nii.gz index 4ff3fa883a..e003ffaea6 100644 --- a/derivatives/data_preprocessed/sub-mpicbs02/anat/sub-mpicbs02_space-other_T2star.nii.gz +++ b/derivatives/data_preprocessed/sub-mpicbs02/anat/sub-mpicbs02_space-other_T2star.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s3602980--6bde202db571709a6e2841656b4e9a82a785695cda89a135727a026a39829713.nii.gz +/annex/objects/SHA256E-s3602992--5f1a9c05d7cdf5fba7a729486ba40ef42784b82ba06140b4c2691b4c298a7704.nii.gz diff --git a/derivatives/data_preprocessed/sub-mpicbs02/dwi/sub-mpicbs02_rec-average_dwi.json b/derivatives/data_preprocessed/sub-mpicbs02/dwi/sub-mpicbs02_rec-average_dwi.json new file mode 100644 index 0000000000..a218d9b38a --- /dev/null +++ b/derivatives/data_preprocessed/sub-mpicbs02/dwi/sub-mpicbs02_rec-average_dwi.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_dmri_moco", + "Version": "SCT v6.1", + "Description": "Mean image across directions after motion correction" + } + ] +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-mpicbs03/anat/sub-mpicbs03_space-other_T2star.nii.gz b/derivatives/data_preprocessed/sub-mpicbs03/anat/sub-mpicbs03_space-other_T2star.nii.gz index 10104c227c..d2d0e73c5f 100644 --- a/derivatives/data_preprocessed/sub-mpicbs03/anat/sub-mpicbs03_space-other_T2star.nii.gz +++ b/derivatives/data_preprocessed/sub-mpicbs03/anat/sub-mpicbs03_space-other_T2star.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s3886012--602b58ea68e75a9e64bf3644b3387731cfb88a7c640e1ab16030222219f5abae.nii.gz +/annex/objects/SHA256E-s3886034--ccb542e0b0f81c228de19c6d278f2756448f37e41a5d51538bd355fea5e0ca1c.nii.gz diff --git a/derivatives/data_preprocessed/sub-mpicbs03/dwi/sub-mpicbs03_rec-average_dwi.json b/derivatives/data_preprocessed/sub-mpicbs03/dwi/sub-mpicbs03_rec-average_dwi.json new file mode 100644 index 0000000000..a218d9b38a --- /dev/null +++ b/derivatives/data_preprocessed/sub-mpicbs03/dwi/sub-mpicbs03_rec-average_dwi.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_dmri_moco", + "Version": "SCT v6.1", + "Description": "Mean image across directions after motion correction" + } + ] +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-mpicbs05/anat/sub-mpicbs05_space-other_T2star.nii.gz b/derivatives/data_preprocessed/sub-mpicbs05/anat/sub-mpicbs05_space-other_T2star.nii.gz index a0cf87c192..8ed25d546a 100644 --- a/derivatives/data_preprocessed/sub-mpicbs05/anat/sub-mpicbs05_space-other_T2star.nii.gz +++ b/derivatives/data_preprocessed/sub-mpicbs05/anat/sub-mpicbs05_space-other_T2star.nii.gz @@ -1 +1 @@ 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100644 index 0000000000..a218d9b38a --- /dev/null +++ b/derivatives/data_preprocessed/sub-nottwil01/dwi/sub-nottwil01_rec-average_dwi.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_dmri_moco", + "Version": "SCT v6.1", + "Description": "Mean image across directions after motion correction" + } + ] +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-nottwil02/anat/sub-nottwil02_space-other_T2star.nii.gz b/derivatives/data_preprocessed/sub-nottwil02/anat/sub-nottwil02_space-other_T2star.nii.gz index b4443e83ec..fea5d1be6f 100644 --- a/derivatives/data_preprocessed/sub-nottwil02/anat/sub-nottwil02_space-other_T2star.nii.gz +++ b/derivatives/data_preprocessed/sub-nottwil02/anat/sub-nottwil02_space-other_T2star.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s2488946--29488794c1b2ae8f1fe780bea669418279e377b6a036901470b75a97cf30f42c.nii.gz +/annex/objects/SHA256E-s2488958--fd536f13cc85789838a8fcb1cd3ba6a668b8f49b96b53af4114eccccc8d7ba26.nii.gz diff --git a/derivatives/data_preprocessed/sub-nottwil02/dwi/sub-nottwil02_rec-average_dwi.json b/derivatives/data_preprocessed/sub-nottwil02/dwi/sub-nottwil02_rec-average_dwi.json new file mode 100644 index 0000000000..a218d9b38a --- /dev/null +++ b/derivatives/data_preprocessed/sub-nottwil02/dwi/sub-nottwil02_rec-average_dwi.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_dmri_moco", + "Version": "SCT v6.1", + "Description": "Mean image across directions after motion correction" + } + ] +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-nottwil03/anat/sub-nottwil03_space-other_T2star.nii.gz b/derivatives/data_preprocessed/sub-nottwil03/anat/sub-nottwil03_space-other_T2star.nii.gz index 3821055647..9d41b31c57 100644 --- a/derivatives/data_preprocessed/sub-nottwil03/anat/sub-nottwil03_space-other_T2star.nii.gz +++ b/derivatives/data_preprocessed/sub-nottwil03/anat/sub-nottwil03_space-other_T2star.nii.gz @@ -1 +1 @@ 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a/derivatives/data_preprocessed/sub-nottwil04/anat/sub-nottwil04_space-other_T2star.nii.gz +++ b/derivatives/data_preprocessed/sub-nottwil04/anat/sub-nottwil04_space-other_T2star.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s2373966--6aa35f159f01d16ae1a412399e9c68df5f80f695884a4cd1715706f05cc961e3.nii.gz +/annex/objects/SHA256E-s2373978--7973780ef4424a0c87eb6f35789a1dfc95ec62bf24c8a17cd6cc6dadc9f59820.nii.gz diff --git a/derivatives/data_preprocessed/sub-nottwil04/dwi/sub-nottwil04_rec-average_dwi.json b/derivatives/data_preprocessed/sub-nottwil04/dwi/sub-nottwil04_rec-average_dwi.json new file mode 100644 index 0000000000..a218d9b38a --- /dev/null +++ b/derivatives/data_preprocessed/sub-nottwil04/dwi/sub-nottwil04_rec-average_dwi.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_dmri_moco", + "Version": "SCT v6.1", + "Description": "Mean image across directions after motion correction" + } + ] +} \ No newline at end of file diff --git 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"GeneratedBy": [ + { + "Name": "sct_dmri_moco", + "Version": "SCT v6.1", + "Description": "Mean image across directions after motion correction" + } + ] +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-nottwil06/anat/sub-nottwil06_space-other_T2star.nii.gz b/derivatives/data_preprocessed/sub-nottwil06/anat/sub-nottwil06_space-other_T2star.nii.gz index ce93f9e6e4..4d8d6977e8 100644 --- a/derivatives/data_preprocessed/sub-nottwil06/anat/sub-nottwil06_space-other_T2star.nii.gz +++ b/derivatives/data_preprocessed/sub-nottwil06/anat/sub-nottwil06_space-other_T2star.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s2467922--299293495b07ecce6f7c71afb1bf8534a2dc036377fc3841dc3ee6f49baf0d2e.nii.gz +/annex/objects/SHA256E-s2467933--4c074fae703e4146d79d0e635f25dfb3537c057082f327e14fecd4a8b2db678d.nii.gz diff --git a/derivatives/data_preprocessed/sub-nottwil06/dwi/sub-nottwil06_rec-average_dwi.json 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b/derivatives/data_preprocessed/sub-nwu02/anat/sub-nwu02_space-other_T2star.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s3581824--f941aed978c468b8175d628bd749b494b0c6401377506b75b42c7335c4a74e2a.nii.gz +/annex/objects/SHA256E-s3581836--8a79b7390d48220827c2b772c59b56ccc87b3bdeab47a33dc4b0de538df00573.nii.gz diff --git a/derivatives/data_preprocessed/sub-nwu02/dwi/sub-nwu02_rec-average_dwi.json b/derivatives/data_preprocessed/sub-nwu02/dwi/sub-nwu02_rec-average_dwi.json new file mode 100644 index 0000000000..a218d9b38a --- /dev/null +++ b/derivatives/data_preprocessed/sub-nwu02/dwi/sub-nwu02_rec-average_dwi.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_dmri_moco", + "Version": "SCT v6.1", + "Description": "Mean image across directions after motion correction" + } + ] +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-nwu03/anat/sub-nwu03_space-other_T2star.nii.gz b/derivatives/data_preprocessed/sub-nwu03/anat/sub-nwu03_space-other_T2star.nii.gz index 73e46d276b..2299862005 100644 --- a/derivatives/data_preprocessed/sub-nwu03/anat/sub-nwu03_space-other_T2star.nii.gz +++ b/derivatives/data_preprocessed/sub-nwu03/anat/sub-nwu03_space-other_T2star.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s3408976--4e6011e3a2f2d39f851abc2c3e497248984cddc9cc6e56f8b071e9bcc3624324.nii.gz +/annex/objects/SHA256E-s3408988--9f9ea131f360cc3863791d1357ff0227072b55e446032c678bd449f7f100ef53.nii.gz diff --git a/derivatives/data_preprocessed/sub-nwu03/dwi/sub-nwu03_rec-average_dwi.json b/derivatives/data_preprocessed/sub-nwu03/dwi/sub-nwu03_rec-average_dwi.json new file mode 100644 index 0000000000..a218d9b38a --- /dev/null +++ b/derivatives/data_preprocessed/sub-nwu03/dwi/sub-nwu03_rec-average_dwi.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_dmri_moco", + "Version": "SCT v6.1", + "Description": "Mean image across directions after motion correction" + } + ] +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-nwu04/anat/sub-nwu04_space-other_T2star.nii.gz b/derivatives/data_preprocessed/sub-nwu04/anat/sub-nwu04_space-other_T2star.nii.gz index c606d1e96f..5813dd7e87 100644 --- a/derivatives/data_preprocessed/sub-nwu04/anat/sub-nwu04_space-other_T2star.nii.gz +++ b/derivatives/data_preprocessed/sub-nwu04/anat/sub-nwu04_space-other_T2star.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s3841442--d3039f54ea90438ccab66faa8cec0077d2588c53d23b50cfb77c95e44402e62c.nii.gz +/annex/objects/SHA256E-s3841451--f675a08586a96933dd0c294c44cd65687b621344776ebdcf5b36c472d5d8fcad.nii.gz diff --git a/derivatives/data_preprocessed/sub-nwu04/dwi/sub-nwu04_rec-average_dwi.json b/derivatives/data_preprocessed/sub-nwu04/dwi/sub-nwu04_rec-average_dwi.json new file mode 100644 index 0000000000..a218d9b38a --- /dev/null +++ b/derivatives/data_preprocessed/sub-nwu04/dwi/sub-nwu04_rec-average_dwi.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_dmri_moco", + "Version": "SCT v6.1", + "Description": "Mean image across directions after motion correction" + } + ] +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-nwu05/anat/sub-nwu05_space-other_T2star.nii.gz b/derivatives/data_preprocessed/sub-nwu05/anat/sub-nwu05_space-other_T2star.nii.gz index c1f4799e42..809a28aced 100644 --- a/derivatives/data_preprocessed/sub-nwu05/anat/sub-nwu05_space-other_T2star.nii.gz +++ b/derivatives/data_preprocessed/sub-nwu05/anat/sub-nwu05_space-other_T2star.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s3528952--6699d2aa150a1e3ae4728458eecdb66c6459519b18dfa7208b19ec0de2e1d3f0.nii.gz +/annex/objects/SHA256E-s3528966--eec2908ecbc732936b3f12b63dddc18dac910e6e474465b105f218c5e0ed4c65.nii.gz diff --git a/derivatives/data_preprocessed/sub-nwu05/dwi/sub-nwu05_rec-average_dwi.json b/derivatives/data_preprocessed/sub-nwu05/dwi/sub-nwu05_rec-average_dwi.json new file mode 100644 index 0000000000..a218d9b38a --- /dev/null +++ b/derivatives/data_preprocessed/sub-nwu05/dwi/sub-nwu05_rec-average_dwi.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_dmri_moco", + "Version": "SCT v6.1", + "Description": "Mean image across directions after motion correction" + } + ] +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-nwu06/anat/sub-nwu06_space-other_T2star.nii.gz b/derivatives/data_preprocessed/sub-nwu06/anat/sub-nwu06_space-other_T2star.nii.gz index 28e6956ed0..0b9c9e8f15 100644 --- a/derivatives/data_preprocessed/sub-nwu06/anat/sub-nwu06_space-other_T2star.nii.gz +++ b/derivatives/data_preprocessed/sub-nwu06/anat/sub-nwu06_space-other_T2star.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s3553995--1eb09a333f71ba0b02adc63079788fc795dbe63f39131054f9af13d112e4349d.nii.gz +/annex/objects/SHA256E-s3554007--9204587492486dd0f27849f119dff17bb7295f728a5dd89f87b7088a5d8746c5.nii.gz diff --git a/derivatives/data_preprocessed/sub-nwu06/dwi/sub-nwu06_rec-average_dwi.json 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0000000000..a218d9b38a --- /dev/null +++ b/derivatives/data_preprocessed/sub-pavia05/dwi/sub-pavia05_rec-average_dwi.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_dmri_moco", + "Version": "SCT v6.1", + "Description": "Mean image across directions after motion correction" + } + ] +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-pavia06/anat/sub-pavia06_space-other_T2star.nii.gz b/derivatives/data_preprocessed/sub-pavia06/anat/sub-pavia06_space-other_T2star.nii.gz index d008986c0b..24712b2130 100644 --- a/derivatives/data_preprocessed/sub-pavia06/anat/sub-pavia06_space-other_T2star.nii.gz +++ b/derivatives/data_preprocessed/sub-pavia06/anat/sub-pavia06_space-other_T2star.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s5828719--efc085c98c7201f84aa7b95a2be5b506c2c2bd286e888a7d6229556e74da2513.nii.gz +/annex/objects/SHA256E-s5828731--55f8f14857a63dcd0d8551438c83b2ce43fbc644bfee194a6d18119135297e57.nii.gz diff --git 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end of file diff --git a/derivatives/data_preprocessed/sub-sherbrooke03/anat/sub-sherbrooke03_space-other_T2star.nii.gz b/derivatives/data_preprocessed/sub-sherbrooke03/anat/sub-sherbrooke03_space-other_T2star.nii.gz index 98a6301dec..2bfddbebf1 100644 --- a/derivatives/data_preprocessed/sub-sherbrooke03/anat/sub-sherbrooke03_space-other_T2star.nii.gz +++ b/derivatives/data_preprocessed/sub-sherbrooke03/anat/sub-sherbrooke03_space-other_T2star.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s2933387--a5998e0d8e4da514ee4ddd0b8bc9fe1cc9807e98c0c10171706b0327f790354d.nii.gz +/annex/objects/SHA256E-s2933401--cb191c17b2a100abd939f4456cff7ad14d4cf507ef3ffaee9d3b7d5af6b8873f.nii.gz diff --git a/derivatives/data_preprocessed/sub-sherbrooke03/dwi/sub-sherbrooke03_rec-average_dwi.json b/derivatives/data_preprocessed/sub-sherbrooke03/dwi/sub-sherbrooke03_rec-average_dwi.json new file mode 100644 index 0000000000..a218d9b38a --- /dev/null +++ b/derivatives/data_preprocessed/sub-sherbrooke03/dwi/sub-sherbrooke03_rec-average_dwi.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_dmri_moco", + "Version": "SCT v6.1", + "Description": "Mean image across directions after motion correction" + } + ] +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-sherbrooke04/anat/sub-sherbrooke04_space-other_T2star.nii.gz b/derivatives/data_preprocessed/sub-sherbrooke04/anat/sub-sherbrooke04_space-other_T2star.nii.gz index 1a5aef04a8..4826051399 100644 --- a/derivatives/data_preprocessed/sub-sherbrooke04/anat/sub-sherbrooke04_space-other_T2star.nii.gz +++ b/derivatives/data_preprocessed/sub-sherbrooke04/anat/sub-sherbrooke04_space-other_T2star.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s2512432--449c466345be987bf96a49df7cf7e14dc12e42590dad3771e890d97f7334ebe4.nii.gz +/annex/objects/SHA256E-s2512444--b1b14707e8ccac1f02fd9f0b5cd430df3d27e65d6370c40b33180a976f96fd73.nii.gz diff --git 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b/derivatives/data_preprocessed/sub-tokyo750w01/anat/sub-tokyo750w01_space-other_T2star.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s8845390--1d9bb379bab47a1c9d41b4102f32da22aa60775e6ef68d2a02cc8c89f353103a.nii.gz +/annex/objects/SHA256E-s8845402--4fe79744304b310d98bd6434df0d96970aca7275deaf25da15e88ab1da289d19.nii.gz diff --git a/derivatives/data_preprocessed/sub-tokyo750w01/dwi/sub-tokyo750w01_rec-average_dwi.json b/derivatives/data_preprocessed/sub-tokyo750w01/dwi/sub-tokyo750w01_rec-average_dwi.json new file mode 100644 index 0000000000..a218d9b38a --- /dev/null +++ b/derivatives/data_preprocessed/sub-tokyo750w01/dwi/sub-tokyo750w01_rec-average_dwi.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_dmri_moco", + "Version": "SCT v6.1", + "Description": "Mean image across directions after motion correction" + } + ] +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-tokyo750w02/anat/sub-tokyo750w02_space-other_T2star.nii.gz 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"Description": "Mean image across directions after motion correction" + } + ] +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-tokyo750w03/anat/sub-tokyo750w03_space-other_T2star.nii.gz b/derivatives/data_preprocessed/sub-tokyo750w03/anat/sub-tokyo750w03_space-other_T2star.nii.gz index c0a40d0a3e..f6fac83e98 100644 --- a/derivatives/data_preprocessed/sub-tokyo750w03/anat/sub-tokyo750w03_space-other_T2star.nii.gz +++ b/derivatives/data_preprocessed/sub-tokyo750w03/anat/sub-tokyo750w03_space-other_T2star.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s8556900--0d60fe4796587fad6523244a4901b657cbf546408695231c607e9a57fd1d3d57.nii.gz +/annex/objects/SHA256E-s8556912--73f780db8dd715396a72961cc95d13f3e8db8aefeb9e87b847ba57b8c8f323bb.nii.gz diff --git a/derivatives/data_preprocessed/sub-tokyo750w03/dwi/sub-tokyo750w03_rec-average_dwi.json b/derivatives/data_preprocessed/sub-tokyo750w03/dwi/sub-tokyo750w03_rec-average_dwi.json new file mode 100644 index 0000000000..a218d9b38a --- /dev/null +++ b/derivatives/data_preprocessed/sub-tokyo750w03/dwi/sub-tokyo750w03_rec-average_dwi.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_dmri_moco", + "Version": "SCT v6.1", + "Description": "Mean image across directions after motion correction" + } + ] +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-tokyo750w04/anat/sub-tokyo750w04_space-other_T2star.nii.gz b/derivatives/data_preprocessed/sub-tokyo750w04/anat/sub-tokyo750w04_space-other_T2star.nii.gz index 11a5a83e16..05a7927fe9 100644 --- a/derivatives/data_preprocessed/sub-tokyo750w04/anat/sub-tokyo750w04_space-other_T2star.nii.gz +++ b/derivatives/data_preprocessed/sub-tokyo750w04/anat/sub-tokyo750w04_space-other_T2star.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s8948489--d6754b755260ca4d7dd94dae7620e17db1f653b809d4726fd71f2c0307731d6e.nii.gz +/annex/objects/SHA256E-s8948501--291cba8e7e71d2ef14a36619e332138ed5705996c8fb8481be5a9afa38929db0.nii.gz diff --git a/derivatives/data_preprocessed/sub-tokyo750w04/dwi/sub-tokyo750w04_rec-average_dwi.json b/derivatives/data_preprocessed/sub-tokyo750w04/dwi/sub-tokyo750w04_rec-average_dwi.json new file mode 100644 index 0000000000..a218d9b38a --- /dev/null +++ b/derivatives/data_preprocessed/sub-tokyo750w04/dwi/sub-tokyo750w04_rec-average_dwi.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_dmri_moco", + "Version": "SCT v6.1", + "Description": "Mean image across directions after motion correction" + } + ] +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-tokyo750w05/anat/sub-tokyo750w05_space-other_T2star.nii.gz b/derivatives/data_preprocessed/sub-tokyo750w05/anat/sub-tokyo750w05_space-other_T2star.nii.gz index d8bbe09689..2031a3b502 100644 --- a/derivatives/data_preprocessed/sub-tokyo750w05/anat/sub-tokyo750w05_space-other_T2star.nii.gz +++ b/derivatives/data_preprocessed/sub-tokyo750w05/anat/sub-tokyo750w05_space-other_T2star.nii.gz @@ -1 +1 @@ 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--- a/derivatives/data_preprocessed/sub-tokyo750w06/anat/sub-tokyo750w06_space-other_T2star.nii.gz +++ b/derivatives/data_preprocessed/sub-tokyo750w06/anat/sub-tokyo750w06_space-other_T2star.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s8465410--64b14db75e5095eaaa64e44857a0b6a26c8f564cf07a99a03a8f9b9d970118e1.nii.gz +/annex/objects/SHA256E-s8465422--b2771d1bee4d916ce1ef69074a7f3e061089a7bd9afe789c0a341226f1ad979a.nii.gz diff --git a/derivatives/data_preprocessed/sub-tokyo750w06/dwi/sub-tokyo750w06_rec-average_dwi.json b/derivatives/data_preprocessed/sub-tokyo750w06/dwi/sub-tokyo750w06_rec-average_dwi.json new file mode 100644 index 0000000000..a218d9b38a --- /dev/null +++ b/derivatives/data_preprocessed/sub-tokyo750w06/dwi/sub-tokyo750w06_rec-average_dwi.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_dmri_moco", + "Version": "SCT v6.1", + "Description": "Mean image across directions after motion correction" + } + ] +} \ No newline at end of file diff --git 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-0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_dmri_moco", + "Version": "SCT v6.1", + "Description": "Mean image across directions after motion correction" + } + ] +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-tokyoIngenia01/anat/sub-tokyoIngenia01_space-other_T2star.nii.gz b/derivatives/data_preprocessed/sub-tokyoIngenia01/anat/sub-tokyoIngenia01_space-other_T2star.nii.gz index 3e1bd55f05..4b58463ac1 100644 --- a/derivatives/data_preprocessed/sub-tokyoIngenia01/anat/sub-tokyoIngenia01_space-other_T2star.nii.gz +++ b/derivatives/data_preprocessed/sub-tokyoIngenia01/anat/sub-tokyoIngenia01_space-other_T2star.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s2794691--9072848d6ddc1676734cf1ebb94f1f66fce75e258ed2104b1a2206da68ef97f5.nii.gz +/annex/objects/SHA256E-s2794703--0a1ed0b957863d5c437c81037f2697d2c93b53ec862931bea0b4671d9a461f36.nii.gz diff --git a/derivatives/data_preprocessed/sub-tokyoIngenia01/dwi/sub-tokyoIngenia01_rec-average_dwi.json 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-/annex/objects/SHA256E-s2818950--2169feb6e352d15797cffa4b60e00c744b74a76e247bf483f0936a107acb2f56.nii.gz +/annex/objects/SHA256E-s2818962--d2658b4284f2bc71aa20e36c2678e63de6f0200d4c7d7772ce2ec350f8f46975.nii.gz diff --git a/derivatives/data_preprocessed/sub-tokyoIngenia02/dwi/sub-tokyoIngenia02_rec-average_dwi.json b/derivatives/data_preprocessed/sub-tokyoIngenia02/dwi/sub-tokyoIngenia02_rec-average_dwi.json new file mode 100644 index 0000000000..a218d9b38a --- /dev/null +++ b/derivatives/data_preprocessed/sub-tokyoIngenia02/dwi/sub-tokyoIngenia02_rec-average_dwi.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_dmri_moco", + "Version": "SCT v6.1", + "Description": "Mean image across directions after motion correction" + } + ] +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-tokyoIngenia03/anat/sub-tokyoIngenia03_space-other_T2star.nii.gz b/derivatives/data_preprocessed/sub-tokyoIngenia03/anat/sub-tokyoIngenia03_space-other_T2star.nii.gz index c1f41fe66b..c1cff26d20 100644 --- a/derivatives/data_preprocessed/sub-tokyoIngenia03/anat/sub-tokyoIngenia03_space-other_T2star.nii.gz +++ b/derivatives/data_preprocessed/sub-tokyoIngenia03/anat/sub-tokyoIngenia03_space-other_T2star.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s2704645--caad642c9193bc80722527d57c57ab3219f944e07eea1ecdada87395b77add9a.nii.gz +/annex/objects/SHA256E-s2704657--9ea42b8973c4199bd8b4edb38995c8ffb925accc7c43938179bbb9197599b9a8.nii.gz diff --git a/derivatives/data_preprocessed/sub-tokyoIngenia03/dwi/sub-tokyoIngenia03_rec-average_dwi.json b/derivatives/data_preprocessed/sub-tokyoIngenia03/dwi/sub-tokyoIngenia03_rec-average_dwi.json new file mode 100644 index 0000000000..a218d9b38a --- /dev/null +++ b/derivatives/data_preprocessed/sub-tokyoIngenia03/dwi/sub-tokyoIngenia03_rec-average_dwi.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_dmri_moco", + "Version": "SCT v6.1", + "Description": "Mean image across directions after motion correction" + } + ] +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-tokyoIngenia04/anat/sub-tokyoIngenia04_space-other_T2star.nii.gz b/derivatives/data_preprocessed/sub-tokyoIngenia04/anat/sub-tokyoIngenia04_space-other_T2star.nii.gz index 8c4f498e58..aea0d82021 100644 --- a/derivatives/data_preprocessed/sub-tokyoIngenia04/anat/sub-tokyoIngenia04_space-other_T2star.nii.gz +++ b/derivatives/data_preprocessed/sub-tokyoIngenia04/anat/sub-tokyoIngenia04_space-other_T2star.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s2869671--95ad759140d7a28b9803308842187a834c317293c9a09c45f915e9265197e090.nii.gz +/annex/objects/SHA256E-s2869683--3118a157b3713634329f14c3f4b9718a33aa0f5df06ca674af75964ec7fdf402.nii.gz diff --git a/derivatives/data_preprocessed/sub-tokyoIngenia04/dwi/sub-tokyoIngenia04_rec-average_dwi.json b/derivatives/data_preprocessed/sub-tokyoIngenia04/dwi/sub-tokyoIngenia04_rec-average_dwi.json new file mode 100644 index 0000000000..a218d9b38a --- /dev/null +++ b/derivatives/data_preprocessed/sub-tokyoIngenia04/dwi/sub-tokyoIngenia04_rec-average_dwi.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_dmri_moco", + "Version": "SCT v6.1", + "Description": "Mean image across directions after motion correction" + } + ] +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-tokyoIngenia05/anat/sub-tokyoIngenia05_space-other_T2star.nii.gz b/derivatives/data_preprocessed/sub-tokyoIngenia05/anat/sub-tokyoIngenia05_space-other_T2star.nii.gz index 1a599fc820..87826683a7 100644 --- a/derivatives/data_preprocessed/sub-tokyoIngenia05/anat/sub-tokyoIngenia05_space-other_T2star.nii.gz +++ b/derivatives/data_preprocessed/sub-tokyoIngenia05/anat/sub-tokyoIngenia05_space-other_T2star.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s2425475--957b38ba7fa18bc76fdaf937569baef3ab07624eb5354bb94fe356ba28f6ea53.nii.gz +/annex/objects/SHA256E-s2425487--b1c6ef2c404d5a0ecc49f802a18f21e0c3aab8f6c75773b0d93d6ad5a13ce2a5.nii.gz diff --git a/derivatives/data_preprocessed/sub-tokyoIngenia05/dwi/sub-tokyoIngenia05_rec-average_dwi.json b/derivatives/data_preprocessed/sub-tokyoIngenia05/dwi/sub-tokyoIngenia05_rec-average_dwi.json new file mode 100644 index 0000000000..a218d9b38a --- /dev/null +++ b/derivatives/data_preprocessed/sub-tokyoIngenia05/dwi/sub-tokyoIngenia05_rec-average_dwi.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_dmri_moco", + "Version": "SCT v6.1", + "Description": "Mean image across directions after motion correction" + } + ] +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-tokyoIngenia06/anat/sub-tokyoIngenia06_space-other_T2star.nii.gz b/derivatives/data_preprocessed/sub-tokyoIngenia06/anat/sub-tokyoIngenia06_space-other_T2star.nii.gz index 234fe00ef0..ceb85bb54e 100644 --- a/derivatives/data_preprocessed/sub-tokyoIngenia06/anat/sub-tokyoIngenia06_space-other_T2star.nii.gz +++ b/derivatives/data_preprocessed/sub-tokyoIngenia06/anat/sub-tokyoIngenia06_space-other_T2star.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s2393306--77ada8d240aff3673e072ba524411e50760150c17cf1238bf65dd39710a37edb.nii.gz +/annex/objects/SHA256E-s2393318--776b987bdf22229a2e9c6ae12f0fa37de16ea3e2ec57eb1025bd7e3d85ff5213.nii.gz diff --git a/derivatives/data_preprocessed/sub-tokyoIngenia06/dwi/sub-tokyoIngenia06_rec-average_dwi.json b/derivatives/data_preprocessed/sub-tokyoIngenia06/dwi/sub-tokyoIngenia06_rec-average_dwi.json new file mode 100644 index 0000000000..a218d9b38a --- /dev/null +++ b/derivatives/data_preprocessed/sub-tokyoIngenia06/dwi/sub-tokyoIngenia06_rec-average_dwi.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_dmri_moco", + "Version": "SCT v6.1", + "Description": "Mean image across directions after motion correction" + } + ] +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-tokyoIngenia07/anat/sub-tokyoIngenia07_space-other_T2star.nii.gz b/derivatives/data_preprocessed/sub-tokyoIngenia07/anat/sub-tokyoIngenia07_space-other_T2star.nii.gz index 3a9ed807e3..97cc498330 100644 --- a/derivatives/data_preprocessed/sub-tokyoIngenia07/anat/sub-tokyoIngenia07_space-other_T2star.nii.gz +++ b/derivatives/data_preprocessed/sub-tokyoIngenia07/anat/sub-tokyoIngenia07_space-other_T2star.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s2833213--bbf070e0de915c6f74288d28ff5f32623e35badc00c495ddf1f431a9ba7f8025.nii.gz +/annex/objects/SHA256E-s2833225--150b9402b19f70a647f92f77b1ce7156ba20a29fdc66468be2a067996971119e.nii.gz diff --git a/derivatives/data_preprocessed/sub-tokyoIngenia07/dwi/sub-tokyoIngenia07_rec-average_dwi.json b/derivatives/data_preprocessed/sub-tokyoIngenia07/dwi/sub-tokyoIngenia07_rec-average_dwi.json new file mode 100644 index 0000000000..a218d9b38a --- /dev/null +++ b/derivatives/data_preprocessed/sub-tokyoIngenia07/dwi/sub-tokyoIngenia07_rec-average_dwi.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_dmri_moco", + "Version": "SCT v6.1", + "Description": "Mean image across directions after motion correction" + } + ] +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-tokyoSkyra01/anat/sub-tokyoSkyra01_space-other_T2star.nii.gz b/derivatives/data_preprocessed/sub-tokyoSkyra01/anat/sub-tokyoSkyra01_space-other_T2star.nii.gz index bb57149b22..4d31607bac 100644 --- a/derivatives/data_preprocessed/sub-tokyoSkyra01/anat/sub-tokyoSkyra01_space-other_T2star.nii.gz +++ b/derivatives/data_preprocessed/sub-tokyoSkyra01/anat/sub-tokyoSkyra01_space-other_T2star.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s4500228--8b08f0fab59b3a69f74d9fb4d6d25652b55a03f2dafa5963de563813fb64aaf8.nii.gz +/annex/objects/SHA256E-s4500240--76a42c999c03cfd1601a4d00ea1fd1883739a6e29bb1c3b581322578df9fc87c.nii.gz diff --git a/derivatives/data_preprocessed/sub-tokyoSkyra01/dwi/sub-tokyoSkyra01_rec-average_dwi.json b/derivatives/data_preprocessed/sub-tokyoSkyra01/dwi/sub-tokyoSkyra01_rec-average_dwi.json new file mode 100644 index 0000000000..a218d9b38a --- /dev/null +++ b/derivatives/data_preprocessed/sub-tokyoSkyra01/dwi/sub-tokyoSkyra01_rec-average_dwi.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_dmri_moco", + "Version": "SCT v6.1", + "Description": "Mean image across directions after motion correction" + } + ] +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-tokyoSkyra02/anat/sub-tokyoSkyra02_space-other_T2star.nii.gz b/derivatives/data_preprocessed/sub-tokyoSkyra02/anat/sub-tokyoSkyra02_space-other_T2star.nii.gz index e5c768d5a6..ab609aaa2a 100644 --- a/derivatives/data_preprocessed/sub-tokyoSkyra02/anat/sub-tokyoSkyra02_space-other_T2star.nii.gz +++ b/derivatives/data_preprocessed/sub-tokyoSkyra02/anat/sub-tokyoSkyra02_space-other_T2star.nii.gz @@ -1 +1 @@ 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da7e7bd39a..fbab74de6b 100644 --- a/derivatives/data_preprocessed/sub-tokyoSkyra03/anat/sub-tokyoSkyra03_space-other_T2star.nii.gz +++ b/derivatives/data_preprocessed/sub-tokyoSkyra03/anat/sub-tokyoSkyra03_space-other_T2star.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s4523724--423d3bc80295fa1089c6a1809a7133157f89833155f88662310087072990d87a.nii.gz +/annex/objects/SHA256E-s4523736--157b00c109345cc9d6446e4fa2cb32d1251b73278e43b07d53d5bbd7eb2aa2f8.nii.gz diff --git a/derivatives/data_preprocessed/sub-tokyoSkyra03/dwi/sub-tokyoSkyra03_rec-average_dwi.json b/derivatives/data_preprocessed/sub-tokyoSkyra03/dwi/sub-tokyoSkyra03_rec-average_dwi.json new file mode 100644 index 0000000000..a218d9b38a --- /dev/null +++ b/derivatives/data_preprocessed/sub-tokyoSkyra03/dwi/sub-tokyoSkyra03_rec-average_dwi.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_dmri_moco", + "Version": "SCT v6.1", + "Description": "Mean image across directions after motion correction" + } + ] +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-tokyoSkyra04/anat/sub-tokyoSkyra04_space-other_T2star.nii.gz b/derivatives/data_preprocessed/sub-tokyoSkyra04/anat/sub-tokyoSkyra04_space-other_T2star.nii.gz index c38b6ec317..f2825566e5 100644 --- a/derivatives/data_preprocessed/sub-tokyoSkyra04/anat/sub-tokyoSkyra04_space-other_T2star.nii.gz +++ b/derivatives/data_preprocessed/sub-tokyoSkyra04/anat/sub-tokyoSkyra04_space-other_T2star.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s4687591--f1e0aa9c389287d263d469880bf1190386c37294703368ab07af067d4fc79a37.nii.gz +/annex/objects/SHA256E-s4687603--feb078b6a5619ccfbaeef9de3004f2363b046391b862412264c09efa156d4f0b.nii.gz diff --git a/derivatives/data_preprocessed/sub-tokyoSkyra04/dwi/sub-tokyoSkyra04_rec-average_dwi.json b/derivatives/data_preprocessed/sub-tokyoSkyra04/dwi/sub-tokyoSkyra04_rec-average_dwi.json new file mode 100644 index 0000000000..a218d9b38a --- /dev/null +++ b/derivatives/data_preprocessed/sub-tokyoSkyra04/dwi/sub-tokyoSkyra04_rec-average_dwi.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_dmri_moco", + "Version": "SCT v6.1", + "Description": "Mean image across directions after motion correction" + } + ] +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-tokyoSkyra05/anat/sub-tokyoSkyra05_space-other_T2star.nii.gz b/derivatives/data_preprocessed/sub-tokyoSkyra05/anat/sub-tokyoSkyra05_space-other_T2star.nii.gz index 8a09cab4dc..feb48dbcad 100644 --- a/derivatives/data_preprocessed/sub-tokyoSkyra05/anat/sub-tokyoSkyra05_space-other_T2star.nii.gz +++ b/derivatives/data_preprocessed/sub-tokyoSkyra05/anat/sub-tokyoSkyra05_space-other_T2star.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s4153163--1cb812edefdd148932d39665e5e7ae4a233000cdca8334ee0ad995a70a755b64.nii.gz +/annex/objects/SHA256E-s4153175--56262145d3df657b1b7bff457db604734c5e8418d32579de75f7bd445d99c394.nii.gz diff --git 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5c2b071692..92ba61a350 100644 --- a/derivatives/data_preprocessed/sub-tokyoSkyra07/anat/sub-tokyoSkyra07_space-other_T2star.nii.gz +++ b/derivatives/data_preprocessed/sub-tokyoSkyra07/anat/sub-tokyoSkyra07_space-other_T2star.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s4612363--481235945faf6858663bcab4b57f746b4cf5d52d419c0b384cc6bf585c1a3027.nii.gz +/annex/objects/SHA256E-s4612376--f8037045f19e3c4c50183d95eadce3347d9599e4e26f2c183a9fc782425bad42.nii.gz diff --git a/derivatives/data_preprocessed/sub-tokyoSkyra07/dwi/sub-tokyoSkyra07_rec-average_dwi.json b/derivatives/data_preprocessed/sub-tokyoSkyra07/dwi/sub-tokyoSkyra07_rec-average_dwi.json new file mode 100644 index 0000000000..a218d9b38a --- /dev/null +++ b/derivatives/data_preprocessed/sub-tokyoSkyra07/dwi/sub-tokyoSkyra07_rec-average_dwi.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_dmri_moco", + "Version": "SCT v6.1", + "Description": "Mean image across directions after motion correction" + } + ] +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-ubc01/anat/sub-ubc01_space-other_T2star.nii.gz b/derivatives/data_preprocessed/sub-ubc01/anat/sub-ubc01_space-other_T2star.nii.gz index 308ff5963d..47d7931f81 100644 --- a/derivatives/data_preprocessed/sub-ubc01/anat/sub-ubc01_space-other_T2star.nii.gz +++ b/derivatives/data_preprocessed/sub-ubc01/anat/sub-ubc01_space-other_T2star.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s2302779--45f1ae190e7bdd9e06ed3895d0ad398337bc8dae8b3cfb61873993cc6540e2cb.nii.gz +/annex/objects/SHA256E-s2302791--844ef385b3bb81cde880436dc662171e2962db82af8bc4c3e56a518029c4d82e.nii.gz diff --git a/derivatives/data_preprocessed/sub-ubc01/dwi/sub-ubc01_rec-average_dwi.json b/derivatives/data_preprocessed/sub-ubc01/dwi/sub-ubc01_rec-average_dwi.json new file mode 100644 index 0000000000..a218d9b38a --- /dev/null +++ b/derivatives/data_preprocessed/sub-ubc01/dwi/sub-ubc01_rec-average_dwi.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_dmri_moco", + "Version": "SCT v6.1", + "Description": "Mean image across directions after motion correction" + } + ] +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-ubc02/anat/sub-ubc02_space-other_T2star.nii.gz b/derivatives/data_preprocessed/sub-ubc02/anat/sub-ubc02_space-other_T2star.nii.gz index 705a2020a4..8db6648f2f 100644 --- a/derivatives/data_preprocessed/sub-ubc02/anat/sub-ubc02_space-other_T2star.nii.gz +++ b/derivatives/data_preprocessed/sub-ubc02/anat/sub-ubc02_space-other_T2star.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s2594151--fe633d1e17b38abdaa0c5959168077550cce91ced902a490c303ae0209950b0c.nii.gz +/annex/objects/SHA256E-s2594163--d6a03d38b872a1519b27470eab5c242652eef24104e48af0990b26f9f5711399.nii.gz diff --git a/derivatives/data_preprocessed/sub-ubc02/dwi/sub-ubc02_rec-average_dwi.json b/derivatives/data_preprocessed/sub-ubc02/dwi/sub-ubc02_rec-average_dwi.json new file mode 100644 index 0000000000..a218d9b38a --- /dev/null +++ b/derivatives/data_preprocessed/sub-ubc02/dwi/sub-ubc02_rec-average_dwi.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_dmri_moco", + "Version": "SCT v6.1", + "Description": "Mean image across directions after motion correction" + } + ] +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-ubc03/anat/sub-ubc03_space-other_T2star.nii.gz b/derivatives/data_preprocessed/sub-ubc03/anat/sub-ubc03_space-other_T2star.nii.gz index e62907a999..add4435f99 100644 --- a/derivatives/data_preprocessed/sub-ubc03/anat/sub-ubc03_space-other_T2star.nii.gz +++ b/derivatives/data_preprocessed/sub-ubc03/anat/sub-ubc03_space-other_T2star.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s2240173--088ad6cc4d0b5f6c40a48511e1f0ab90fc65bb2d5c7dd958fc63da1b7e1914f0.nii.gz +/annex/objects/SHA256E-s2240185--eb6b240cb548ad9aecf81c1d1fea0ee96580994220648554e169a969f6f00a1a.nii.gz diff --git a/derivatives/data_preprocessed/sub-ubc03/dwi/sub-ubc03_rec-average_dwi.json b/derivatives/data_preprocessed/sub-ubc03/dwi/sub-ubc03_rec-average_dwi.json new file mode 100644 index 0000000000..a218d9b38a --- /dev/null +++ b/derivatives/data_preprocessed/sub-ubc03/dwi/sub-ubc03_rec-average_dwi.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_dmri_moco", + "Version": "SCT v6.1", + "Description": "Mean image across directions after motion correction" + } + ] +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-ubc04/anat/sub-ubc04_space-other_T2star.nii.gz b/derivatives/data_preprocessed/sub-ubc04/anat/sub-ubc04_space-other_T2star.nii.gz index 6a3f0db66b..ba4e2fe8ac 100644 --- a/derivatives/data_preprocessed/sub-ubc04/anat/sub-ubc04_space-other_T2star.nii.gz +++ b/derivatives/data_preprocessed/sub-ubc04/anat/sub-ubc04_space-other_T2star.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s1949784--b44d92e4501956a6256e21100bfda3313d8ab41d2741a7577aebe8670fc7f5e7.nii.gz +/annex/objects/SHA256E-s1949796--3ee1bc8327de71053aabdc4a9a2fc06768834b5f1cacd190994961b006b4d135.nii.gz diff --git a/derivatives/data_preprocessed/sub-ubc04/dwi/sub-ubc04_rec-average_dwi.json b/derivatives/data_preprocessed/sub-ubc04/dwi/sub-ubc04_rec-average_dwi.json new file mode 100644 index 0000000000..a218d9b38a --- /dev/null +++ b/derivatives/data_preprocessed/sub-ubc04/dwi/sub-ubc04_rec-average_dwi.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_dmri_moco", + "Version": "SCT v6.1", + "Description": "Mean image across directions after motion correction" + } + ] +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-ubc05/anat/sub-ubc05_space-other_T2star.nii.gz b/derivatives/data_preprocessed/sub-ubc05/anat/sub-ubc05_space-other_T2star.nii.gz index b8149244cf..0a2a1f9f89 100644 --- a/derivatives/data_preprocessed/sub-ubc05/anat/sub-ubc05_space-other_T2star.nii.gz +++ b/derivatives/data_preprocessed/sub-ubc05/anat/sub-ubc05_space-other_T2star.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s2455511--61407ab2ca23d281bf58017d053f63bbfe56e62991145ea10dcf05d68667abb6.nii.gz +/annex/objects/SHA256E-s2455523--fc95b0f43b5929308e9ca61497f6b2de8464ed7a1c36c5223c594630cfd463e9.nii.gz diff --git a/derivatives/data_preprocessed/sub-ubc05/dwi/sub-ubc05_rec-average_dwi.json b/derivatives/data_preprocessed/sub-ubc05/dwi/sub-ubc05_rec-average_dwi.json new file mode 100644 index 0000000000..a218d9b38a --- /dev/null +++ b/derivatives/data_preprocessed/sub-ubc05/dwi/sub-ubc05_rec-average_dwi.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_dmri_moco", + "Version": "SCT v6.1", + "Description": "Mean image across directions after motion correction" + } + ] +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-ubc06/anat/sub-ubc06_space-other_T2star.nii.gz b/derivatives/data_preprocessed/sub-ubc06/anat/sub-ubc06_space-other_T2star.nii.gz index 173269a483..eb2bd311d2 100644 --- a/derivatives/data_preprocessed/sub-ubc06/anat/sub-ubc06_space-other_T2star.nii.gz +++ b/derivatives/data_preprocessed/sub-ubc06/anat/sub-ubc06_space-other_T2star.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s2751829--3041c877327e9b9a629adc7bc07e8c1eb5803558aa5caa35f0a56bcc414e5907.nii.gz +/annex/objects/SHA256E-s2751841--c621075bb0d37dd96e34a7a1ca3831f4c7f4cf2180d7c14e8cc6e76c0abee729.nii.gz diff --git a/derivatives/data_preprocessed/sub-ubc06/dwi/sub-ubc06_rec-average_dwi.json b/derivatives/data_preprocessed/sub-ubc06/dwi/sub-ubc06_rec-average_dwi.json new file mode 100644 index 0000000000..a218d9b38a --- /dev/null +++ b/derivatives/data_preprocessed/sub-ubc06/dwi/sub-ubc06_rec-average_dwi.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_dmri_moco", + "Version": "SCT v6.1", + "Description": "Mean image across directions after motion correction" + } + ] +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-ucdavis01/anat/sub-ucdavis01_space-other_T2star.nii.gz b/derivatives/data_preprocessed/sub-ucdavis01/anat/sub-ucdavis01_space-other_T2star.nii.gz index 3ca08e0592..e5ea2c68c7 100644 --- a/derivatives/data_preprocessed/sub-ucdavis01/anat/sub-ucdavis01_space-other_T2star.nii.gz +++ b/derivatives/data_preprocessed/sub-ucdavis01/anat/sub-ucdavis01_space-other_T2star.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s3769935--d9fd1d462b7ff1c168e4ec0c4d8638af833ea1995143e71dcd1519c0cfc45617.nii.gz +/annex/objects/SHA256E-s3769948--4b9d89f976fc76236278319754fb97b442a8405a099d6d1695d5ccda7014a36a.nii.gz diff --git a/derivatives/data_preprocessed/sub-ucdavis02/anat/sub-ucdavis02_space-other_T2star.nii.gz b/derivatives/data_preprocessed/sub-ucdavis02/anat/sub-ucdavis02_space-other_T2star.nii.gz index 8387716218..674424b042 100644 --- a/derivatives/data_preprocessed/sub-ucdavis02/anat/sub-ucdavis02_space-other_T2star.nii.gz +++ b/derivatives/data_preprocessed/sub-ucdavis02/anat/sub-ucdavis02_space-other_T2star.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s3473660--8b39c5369c9fc30c4f1f6a9937e520d5cd7459f6d984b766edb8fa6ae9afe828.nii.gz +/annex/objects/SHA256E-s3473672--2d86efacef8e70c935e676236b645d336b863d0756dd4fd0a4fa7f97f53e7227.nii.gz diff --git a/derivatives/data_preprocessed/sub-ucdavis03/anat/sub-ucdavis03_space-other_T2star.nii.gz b/derivatives/data_preprocessed/sub-ucdavis03/anat/sub-ucdavis03_space-other_T2star.nii.gz index e9bab69c15..5e69487fa3 100644 --- a/derivatives/data_preprocessed/sub-ucdavis03/anat/sub-ucdavis03_space-other_T2star.nii.gz +++ b/derivatives/data_preprocessed/sub-ucdavis03/anat/sub-ucdavis03_space-other_T2star.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s4026792--124449f0c7319267d71b3018212c1cefa4df1e83dbc6a2c63ed6d098261d2ba8.nii.gz +/annex/objects/SHA256E-s4026804--1bf4ab0e1c0b0af6afad8b649fb35be6b399219b7a9125e12726bbaeb6ab835f.nii.gz diff --git a/derivatives/data_preprocessed/sub-ucdavis03/dwi/sub-ucdavis03_rec-average_dwi.json b/derivatives/data_preprocessed/sub-ucdavis03/dwi/sub-ucdavis03_rec-average_dwi.json new file mode 100644 index 0000000000..a218d9b38a --- /dev/null +++ b/derivatives/data_preprocessed/sub-ucdavis03/dwi/sub-ucdavis03_rec-average_dwi.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_dmri_moco", + "Version": "SCT v6.1", + "Description": "Mean image across directions after motion correction" + } + ] +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-ucdavis04/anat/sub-ucdavis04_space-other_T2star.nii.gz b/derivatives/data_preprocessed/sub-ucdavis04/anat/sub-ucdavis04_space-other_T2star.nii.gz index 19882091c6..bd2e5ca009 100644 --- a/derivatives/data_preprocessed/sub-ucdavis04/anat/sub-ucdavis04_space-other_T2star.nii.gz +++ b/derivatives/data_preprocessed/sub-ucdavis04/anat/sub-ucdavis04_space-other_T2star.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s3763240--d9d4ae134367c90ae7a819509b3c9915011c01ee32669336d1f25c7c7355a7c1.nii.gz +/annex/objects/SHA256E-s3763252--e1896944b255dc36db9b07be6cb3939386f3519d4f4981ca33b9179d3a213c3b.nii.gz diff --git a/derivatives/data_preprocessed/sub-ucdavis05/anat/sub-ucdavis05_space-other_T2star.nii.gz b/derivatives/data_preprocessed/sub-ucdavis05/anat/sub-ucdavis05_space-other_T2star.nii.gz index 222a0cb978..ee388fcfe6 100644 --- a/derivatives/data_preprocessed/sub-ucdavis05/anat/sub-ucdavis05_space-other_T2star.nii.gz +++ b/derivatives/data_preprocessed/sub-ucdavis05/anat/sub-ucdavis05_space-other_T2star.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s3902371--abfef65b6cda8ae4174f1d1d663e0423838739b59b2f4ae3cf2cc9273ecc1d16.nii.gz +/annex/objects/SHA256E-s3902384--797e2e0364cfbef4766b3d3753f81d4a5f87db090f78318297856ab81eccf488.nii.gz diff --git a/derivatives/data_preprocessed/sub-ucdavis05/dwi/sub-ucdavis05_rec-average_dwi.json 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b/derivatives/data_preprocessed/sub-ucdavis07/anat/sub-ucdavis07_space-other_T2star.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s3021065--63cadaf55a49ad100dc233ad1dd516d7f640ea2aefe98446b6bb64f79c764e42.nii.gz +/annex/objects/SHA256E-s3021077--ae578ed4d969507aeea4f526c78591a849799431704c93d89d14547cd94e0136.nii.gz diff --git a/derivatives/data_preprocessed/sub-ucdavis07/dwi/sub-ucdavis07_rec-average_dwi.json b/derivatives/data_preprocessed/sub-ucdavis07/dwi/sub-ucdavis07_rec-average_dwi.json new file mode 100644 index 0000000000..a218d9b38a --- /dev/null +++ b/derivatives/data_preprocessed/sub-ucdavis07/dwi/sub-ucdavis07_rec-average_dwi.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_dmri_moco", + "Version": "SCT v6.1", + "Description": "Mean image across directions after motion correction" + } + ] +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-ucl01/anat/sub-ucl01_space-other_T2star.nii.gz b/derivatives/data_preprocessed/sub-ucl01/anat/sub-ucl01_space-other_T2star.nii.gz index a6284dfd0c..afff3109a6 100644 --- a/derivatives/data_preprocessed/sub-ucl01/anat/sub-ucl01_space-other_T2star.nii.gz +++ b/derivatives/data_preprocessed/sub-ucl01/anat/sub-ucl01_space-other_T2star.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s6171155--aad5a5a7a2c0235afc9c687a1f495535fc441d2b2d5b2c5b45fef65facd65f09.nii.gz +/annex/objects/SHA256E-s6171167--14894315afe30a2977c9cdbef6c77f737f36cff9dfe09d37b5574a9091b4c062.nii.gz diff --git a/derivatives/data_preprocessed/sub-ucl01/dwi/sub-ucl01_rec-average_dwi.json b/derivatives/data_preprocessed/sub-ucl01/dwi/sub-ucl01_rec-average_dwi.json new file mode 100644 index 0000000000..a218d9b38a --- /dev/null +++ b/derivatives/data_preprocessed/sub-ucl01/dwi/sub-ucl01_rec-average_dwi.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_dmri_moco", + "Version": "SCT v6.1", + "Description": "Mean image across directions after motion correction" + } + ] +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-ucl02/anat/sub-ucl02_space-other_T2star.nii.gz b/derivatives/data_preprocessed/sub-ucl02/anat/sub-ucl02_space-other_T2star.nii.gz index 36b02e9f9c..5c6a54718b 100644 --- a/derivatives/data_preprocessed/sub-ucl02/anat/sub-ucl02_space-other_T2star.nii.gz +++ b/derivatives/data_preprocessed/sub-ucl02/anat/sub-ucl02_space-other_T2star.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s7276030--6a82a15b6f1fa5ef51b632d149ad669ed2713556a5e4c5ff1f9eb6157468c4b0.nii.gz +/annex/objects/SHA256E-s7276042--9f78c40fc8e05b165da7b9e491b55c077c079f88a9093e28114b0b249fcf7f20.nii.gz diff --git a/derivatives/data_preprocessed/sub-ucl02/dwi/sub-ucl02_rec-average_dwi.json b/derivatives/data_preprocessed/sub-ucl02/dwi/sub-ucl02_rec-average_dwi.json new file mode 100644 index 0000000000..a218d9b38a --- /dev/null +++ b/derivatives/data_preprocessed/sub-ucl02/dwi/sub-ucl02_rec-average_dwi.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_dmri_moco", + "Version": "SCT v6.1", + "Description": "Mean image across directions after motion correction" + } + ] +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-ucl03/anat/sub-ucl03_space-other_T2star.nii.gz b/derivatives/data_preprocessed/sub-ucl03/anat/sub-ucl03_space-other_T2star.nii.gz index c35e1ed1a8..7abcbec1be 100644 --- a/derivatives/data_preprocessed/sub-ucl03/anat/sub-ucl03_space-other_T2star.nii.gz +++ b/derivatives/data_preprocessed/sub-ucl03/anat/sub-ucl03_space-other_T2star.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s6674956--85b292d178b14bdb9fba1b55b2d09170b45e022f764e6d1c06786d97cf528b2f.nii.gz +/annex/objects/SHA256E-s6674968--ef0ca7eb21af8a8427d0997fc3e8743e09ae377af7bffa1bb535403bef4f4296.nii.gz diff --git a/derivatives/data_preprocessed/sub-ucl03/dwi/sub-ucl03_rec-average_dwi.json b/derivatives/data_preprocessed/sub-ucl03/dwi/sub-ucl03_rec-average_dwi.json new file mode 100644 index 0000000000..a218d9b38a --- /dev/null +++ b/derivatives/data_preprocessed/sub-ucl03/dwi/sub-ucl03_rec-average_dwi.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_dmri_moco", + "Version": "SCT v6.1", + "Description": "Mean image across directions after motion correction" + } + ] +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-ucl04/anat/sub-ucl04_space-other_T2star.nii.gz b/derivatives/data_preprocessed/sub-ucl04/anat/sub-ucl04_space-other_T2star.nii.gz index 81960951ea..d3dc85bbff 100644 --- a/derivatives/data_preprocessed/sub-ucl04/anat/sub-ucl04_space-other_T2star.nii.gz +++ b/derivatives/data_preprocessed/sub-ucl04/anat/sub-ucl04_space-other_T2star.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s6113517--ddc71ba92f733950d36b7683a058b51387e139ac377fc2da01baae88ae1831b4.nii.gz +/annex/objects/SHA256E-s6113529--cebc8ecb656ead163c96c4a125087150e53a4dc8c7b8b5c0d118c6440826802b.nii.gz diff --git a/derivatives/data_preprocessed/sub-ucl04/dwi/sub-ucl04_rec-average_dwi.json b/derivatives/data_preprocessed/sub-ucl04/dwi/sub-ucl04_rec-average_dwi.json new file mode 100644 index 0000000000..a218d9b38a --- /dev/null +++ b/derivatives/data_preprocessed/sub-ucl04/dwi/sub-ucl04_rec-average_dwi.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_dmri_moco", + "Version": "SCT v6.1", + "Description": "Mean image across directions after motion correction" + } + ] +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-ucl05/anat/sub-ucl05_space-other_T2star.nii.gz b/derivatives/data_preprocessed/sub-ucl05/anat/sub-ucl05_space-other_T2star.nii.gz index 755115cbdc..76547fbe9b 100644 --- a/derivatives/data_preprocessed/sub-ucl05/anat/sub-ucl05_space-other_T2star.nii.gz +++ b/derivatives/data_preprocessed/sub-ucl05/anat/sub-ucl05_space-other_T2star.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s9253662--edf6812d549ed5599ad233a38096d4f9d8e47d5f2f8dde3648dcf27b8094d70c.nii.gz 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b/derivatives/data_preprocessed/sub-ucl06/anat/sub-ucl06_space-other_T2star.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s6024862--7491a61164de3af8b4130521bca601cc8f76a6eac6727fdebe6f0c02618888e0.nii.gz +/annex/objects/SHA256E-s6024874--5a31cb05c631bb08c561eb39e7f8a66a7968c7880f2b79a755c51dbf46adc678.nii.gz diff --git a/derivatives/data_preprocessed/sub-ucl06/dwi/sub-ucl06_rec-average_dwi.json b/derivatives/data_preprocessed/sub-ucl06/dwi/sub-ucl06_rec-average_dwi.json new file mode 100644 index 0000000000..a218d9b38a --- /dev/null +++ b/derivatives/data_preprocessed/sub-ucl06/dwi/sub-ucl06_rec-average_dwi.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_dmri_moco", + "Version": "SCT v6.1", + "Description": "Mean image across directions after motion correction" + } + ] +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-unf01/anat/sub-unf01_space-other_T2star.nii.gz b/derivatives/data_preprocessed/sub-unf01/anat/sub-unf01_space-other_T2star.nii.gz index dcda5cde26..91d363e1dd 100644 --- a/derivatives/data_preprocessed/sub-unf01/anat/sub-unf01_space-other_T2star.nii.gz +++ b/derivatives/data_preprocessed/sub-unf01/anat/sub-unf01_space-other_T2star.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s3740046--69c9911fda85cdd0a470cfc1002ae58dce484f582790854f187fc8bdebff1862.nii.gz +/annex/objects/SHA256E-s3740058--f4c1468bcae0b298679c69bf640ce7fd644da5438ba094721a971c0adfa1d18e.nii.gz diff --git a/derivatives/data_preprocessed/sub-unf01/dwi/sub-unf01_rec-average_dwi.json b/derivatives/data_preprocessed/sub-unf01/dwi/sub-unf01_rec-average_dwi.json new file mode 100644 index 0000000000..a218d9b38a --- /dev/null +++ b/derivatives/data_preprocessed/sub-unf01/dwi/sub-unf01_rec-average_dwi.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_dmri_moco", + "Version": "SCT v6.1", + "Description": "Mean image across directions after motion correction" + } + ] +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-unf02/anat/sub-unf02_space-other_T2star.nii.gz b/derivatives/data_preprocessed/sub-unf02/anat/sub-unf02_space-other_T2star.nii.gz index 1a32aceea9..9382d3e4c4 100644 --- a/derivatives/data_preprocessed/sub-unf02/anat/sub-unf02_space-other_T2star.nii.gz +++ b/derivatives/data_preprocessed/sub-unf02/anat/sub-unf02_space-other_T2star.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s4688994--9730a4c63d6ffcd786ab6c2dfd580a45b56a7449e4dd4f76a7e916a487d8ec8c.nii.gz +/annex/objects/SHA256E-s4689005--89fe705f0257b0fb90d05a53ccc5920a35d35c6c9db3f3e3a502e0a2fb735b2c.nii.gz diff --git a/derivatives/data_preprocessed/sub-unf02/dwi/sub-unf02_rec-average_dwi.json b/derivatives/data_preprocessed/sub-unf02/dwi/sub-unf02_rec-average_dwi.json new file mode 100644 index 0000000000..a218d9b38a --- /dev/null +++ b/derivatives/data_preprocessed/sub-unf02/dwi/sub-unf02_rec-average_dwi.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_dmri_moco", + "Version": "SCT 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b/derivatives/data_preprocessed/sub-unf03/dwi/sub-unf03_rec-average_dwi.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_dmri_moco", + "Version": "SCT v6.1", + "Description": "Mean image across directions after motion correction" + } + ] +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-unf04/anat/sub-unf04_space-other_T2star.nii.gz b/derivatives/data_preprocessed/sub-unf04/anat/sub-unf04_space-other_T2star.nii.gz index 898178d7c1..a12e41dc5c 100644 --- a/derivatives/data_preprocessed/sub-unf04/anat/sub-unf04_space-other_T2star.nii.gz +++ b/derivatives/data_preprocessed/sub-unf04/anat/sub-unf04_space-other_T2star.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s3806264--67db5085cbefcd16580d77d8e4ee9576de704b19b95706766a7f6d3e84d642c7.nii.gz +/annex/objects/SHA256E-s3806276--0e9ef1f2d7883fb4c9bc2e546657626705d4b0f563e3f49dc53db807540ef85a.nii.gz diff --git a/derivatives/data_preprocessed/sub-unf04/dwi/sub-unf04_rec-average_dwi.json 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a/derivatives/data_preprocessed/sub-vuiisAchieva03/dwi/sub-vuiisAchieva03_rec-average_dwi.json b/derivatives/data_preprocessed/sub-vuiisAchieva03/dwi/sub-vuiisAchieva03_rec-average_dwi.json new file mode 100644 index 0000000000..a218d9b38a --- /dev/null +++ b/derivatives/data_preprocessed/sub-vuiisAchieva03/dwi/sub-vuiisAchieva03_rec-average_dwi.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_dmri_moco", + "Version": "SCT v6.1", + "Description": "Mean image across directions after motion correction" + } + ] +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-vuiisAchieva04/anat/sub-vuiisAchieva04_space-other_T2star.nii.gz b/derivatives/data_preprocessed/sub-vuiisAchieva04/anat/sub-vuiisAchieva04_space-other_T2star.nii.gz index 34e7fb4aa8..1a7ca25992 100644 --- a/derivatives/data_preprocessed/sub-vuiisAchieva04/anat/sub-vuiisAchieva04_space-other_T2star.nii.gz +++ b/derivatives/data_preprocessed/sub-vuiisAchieva04/anat/sub-vuiisAchieva04_space-other_T2star.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s6005053--21b2b59260dd93f7228d7b4eabfde88f0993cf3f0186398e607fcf37a5d58dc1.nii.gz +/annex/objects/SHA256E-s6005065--7faa5e44ae3933cd828db5d7ece09268dbad7f647ecbfe3451022acca37bf1a8.nii.gz diff --git a/derivatives/data_preprocessed/sub-vuiisAchieva04/dwi/sub-vuiisAchieva04_rec-average_dwi.json b/derivatives/data_preprocessed/sub-vuiisAchieva04/dwi/sub-vuiisAchieva04_rec-average_dwi.json new file mode 100644 index 0000000000..a218d9b38a --- /dev/null +++ b/derivatives/data_preprocessed/sub-vuiisAchieva04/dwi/sub-vuiisAchieva04_rec-average_dwi.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_dmri_moco", + "Version": "SCT v6.1", + "Description": "Mean image across directions after motion correction" + } + ] +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-vuiisAchieva05/anat/sub-vuiisAchieva05_space-other_T2star.nii.gz b/derivatives/data_preprocessed/sub-vuiisAchieva05/anat/sub-vuiisAchieva05_space-other_T2star.nii.gz index f167e64d4e..77732ae535 100644 --- a/derivatives/data_preprocessed/sub-vuiisAchieva05/anat/sub-vuiisAchieva05_space-other_T2star.nii.gz +++ b/derivatives/data_preprocessed/sub-vuiisAchieva05/anat/sub-vuiisAchieva05_space-other_T2star.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s7408796--11e0c9698d146b399000a32ea92ceaefac4337223d916e151deecdf8fc300627.nii.gz +/annex/objects/SHA256E-s7408808--6fe4f5c12251cf08683abfe88075c49ad19ffb5fcbd4f4a9ed211a013e45c66e.nii.gz diff --git a/derivatives/data_preprocessed/sub-vuiisAchieva05/dwi/sub-vuiisAchieva05_rec-average_dwi.json b/derivatives/data_preprocessed/sub-vuiisAchieva05/dwi/sub-vuiisAchieva05_rec-average_dwi.json new file mode 100644 index 0000000000..a218d9b38a --- /dev/null +++ b/derivatives/data_preprocessed/sub-vuiisAchieva05/dwi/sub-vuiisAchieva05_rec-average_dwi.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_dmri_moco", + "Version": "SCT v6.1", + "Description": "Mean image across directions after motion correction" + } + ] +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-vuiisAchieva06/anat/sub-vuiisAchieva06_space-other_T2star.nii.gz b/derivatives/data_preprocessed/sub-vuiisAchieva06/anat/sub-vuiisAchieva06_space-other_T2star.nii.gz index eee7f2dfae..65edb439e0 100644 --- a/derivatives/data_preprocessed/sub-vuiisAchieva06/anat/sub-vuiisAchieva06_space-other_T2star.nii.gz +++ b/derivatives/data_preprocessed/sub-vuiisAchieva06/anat/sub-vuiisAchieva06_space-other_T2star.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s6707236--d1b4f259d9fe650fd6196664806125aff73562d97a7e04201c7b0be41515da3a.nii.gz +/annex/objects/SHA256E-s6707248--3be69bae4464cc98cf81f122883d9430f49b18b52b874d0e196fc5826a7ae681.nii.gz diff --git a/derivatives/data_preprocessed/sub-vuiisAchieva06/dwi/sub-vuiisAchieva06_rec-average_dwi.json b/derivatives/data_preprocessed/sub-vuiisAchieva06/dwi/sub-vuiisAchieva06_rec-average_dwi.json new file mode 100644 index 0000000000..a218d9b38a --- /dev/null +++ b/derivatives/data_preprocessed/sub-vuiisAchieva06/dwi/sub-vuiisAchieva06_rec-average_dwi.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_dmri_moco", + "Version": "SCT v6.1", + "Description": "Mean image across directions after motion correction" + } + ] +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-vuiisIngenia01/anat/sub-vuiisIngenia01_space-other_T2star.nii.gz b/derivatives/data_preprocessed/sub-vuiisIngenia01/anat/sub-vuiisIngenia01_space-other_T2star.nii.gz index d3b093b1cd..e0c12acec0 100644 --- a/derivatives/data_preprocessed/sub-vuiisIngenia01/anat/sub-vuiisIngenia01_space-other_T2star.nii.gz +++ b/derivatives/data_preprocessed/sub-vuiisIngenia01/anat/sub-vuiisIngenia01_space-other_T2star.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s5924191--990c565136e39d125c4eb1448a67536eef6a94eb1dbc9c87c0e62675f465f493.nii.gz +/annex/objects/SHA256E-s5924203--08c7e8987c3022a6c9cb2747f0aa609d3eaa19e1f586f04fd4e18cebf5b22500.nii.gz diff --git a/derivatives/data_preprocessed/sub-vuiisIngenia01/dwi/sub-vuiisIngenia01_rec-average_dwi.json b/derivatives/data_preprocessed/sub-vuiisIngenia01/dwi/sub-vuiisIngenia01_rec-average_dwi.json new file mode 100644 index 0000000000..a218d9b38a --- /dev/null +++ b/derivatives/data_preprocessed/sub-vuiisIngenia01/dwi/sub-vuiisIngenia01_rec-average_dwi.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_dmri_moco", + "Version": "SCT v6.1", + "Description": "Mean image across directions after motion correction" + } + ] +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-vuiisIngenia02/anat/sub-vuiisIngenia02_space-other_T2star.nii.gz b/derivatives/data_preprocessed/sub-vuiisIngenia02/anat/sub-vuiisIngenia02_space-other_T2star.nii.gz index 3c4305a5eb..3d5e98f6d7 100644 --- a/derivatives/data_preprocessed/sub-vuiisIngenia02/anat/sub-vuiisIngenia02_space-other_T2star.nii.gz +++ b/derivatives/data_preprocessed/sub-vuiisIngenia02/anat/sub-vuiisIngenia02_space-other_T2star.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s5464028--e603d6a386149b5c03ce363661c6b4935b4db29aa3ab6ee065cc8bf1599a02ae.nii.gz +/annex/objects/SHA256E-s5464040--ae6897f2444f760ba6a34a21133c97967cebf27d6ee0d691d1fdc6cc1b98b460.nii.gz diff --git a/derivatives/data_preprocessed/sub-vuiisIngenia02/dwi/sub-vuiisIngenia02_rec-average_dwi.json b/derivatives/data_preprocessed/sub-vuiisIngenia02/dwi/sub-vuiisIngenia02_rec-average_dwi.json new file mode 100644 index 0000000000..a218d9b38a --- /dev/null +++ b/derivatives/data_preprocessed/sub-vuiisIngenia02/dwi/sub-vuiisIngenia02_rec-average_dwi.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_dmri_moco", + "Version": "SCT v6.1", + "Description": "Mean image across directions after motion correction" + } + ] +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-vuiisIngenia03/anat/sub-vuiisIngenia03_space-other_T2star.nii.gz b/derivatives/data_preprocessed/sub-vuiisIngenia03/anat/sub-vuiisIngenia03_space-other_T2star.nii.gz index 705d31c4d1..1319fdd02f 100644 --- a/derivatives/data_preprocessed/sub-vuiisIngenia03/anat/sub-vuiisIngenia03_space-other_T2star.nii.gz +++ b/derivatives/data_preprocessed/sub-vuiisIngenia03/anat/sub-vuiisIngenia03_space-other_T2star.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s6343716--06c1f4baf0ee327e801bce2ec33cb7e9632e89577ee56bd50edfbb7e9749de9b.nii.gz +/annex/objects/SHA256E-s6343728--f06e25c8c17bd54f7185fc9cd95c76f5ef595454e1c3889b7e7ce5d22950119b.nii.gz diff --git a/derivatives/data_preprocessed/sub-vuiisIngenia03/dwi/sub-vuiisIngenia03_rec-average_dwi.json b/derivatives/data_preprocessed/sub-vuiisIngenia03/dwi/sub-vuiisIngenia03_rec-average_dwi.json new file mode 100644 index 0000000000..a218d9b38a --- /dev/null +++ b/derivatives/data_preprocessed/sub-vuiisIngenia03/dwi/sub-vuiisIngenia03_rec-average_dwi.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_dmri_moco", + "Version": "SCT v6.1", + "Description": "Mean image across directions after motion correction" + } + ] +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-vuiisIngenia04/anat/sub-vuiisIngenia04_space-other_T2star.nii.gz b/derivatives/data_preprocessed/sub-vuiisIngenia04/anat/sub-vuiisIngenia04_space-other_T2star.nii.gz index e18ab931e8..b0d3d82062 100644 --- a/derivatives/data_preprocessed/sub-vuiisIngenia04/anat/sub-vuiisIngenia04_space-other_T2star.nii.gz +++ b/derivatives/data_preprocessed/sub-vuiisIngenia04/anat/sub-vuiisIngenia04_space-other_T2star.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s5173846--b82b9bb0413c18a831a4db33f079a9aab9b88acdfa8cde2047d4a5b76dadb8a8.nii.gz +/annex/objects/SHA256E-s5173858--63e674b694caef9fee66df4c20bb36ce2663b39537f90b414dfeed42537ade94.nii.gz diff --git a/derivatives/data_preprocessed/sub-vuiisIngenia04/dwi/sub-vuiisIngenia04_rec-average_dwi.json b/derivatives/data_preprocessed/sub-vuiisIngenia04/dwi/sub-vuiisIngenia04_rec-average_dwi.json new file mode 100644 index 0000000000..a218d9b38a --- /dev/null +++ b/derivatives/data_preprocessed/sub-vuiisIngenia04/dwi/sub-vuiisIngenia04_rec-average_dwi.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_dmri_moco", + "Version": "SCT v6.1", + "Description": "Mean image across directions after motion correction" + } + ] +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-vuiisIngenia05/anat/sub-vuiisIngenia05_space-other_T2star.nii.gz b/derivatives/data_preprocessed/sub-vuiisIngenia05/anat/sub-vuiisIngenia05_space-other_T2star.nii.gz index 50d24d36a7..a3dc8cb955 100644 --- a/derivatives/data_preprocessed/sub-vuiisIngenia05/anat/sub-vuiisIngenia05_space-other_T2star.nii.gz +++ b/derivatives/data_preprocessed/sub-vuiisIngenia05/anat/sub-vuiisIngenia05_space-other_T2star.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s8524948--17e37144d0e7055ec2472f301dad06060103b7440361d45d061c7e0b55576cd6.nii.gz +/annex/objects/SHA256E-s8524960--d11d3873f8ba6ad997ef31228b644fc260126a8d612ccde7f976ec9c998c42bd.nii.gz diff --git a/derivatives/data_preprocessed/sub-vuiisIngenia05/dwi/sub-vuiisIngenia05_rec-average_dwi.json b/derivatives/data_preprocessed/sub-vuiisIngenia05/dwi/sub-vuiisIngenia05_rec-average_dwi.json new file mode 100644 index 0000000000..a218d9b38a --- /dev/null +++ b/derivatives/data_preprocessed/sub-vuiisIngenia05/dwi/sub-vuiisIngenia05_rec-average_dwi.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_dmri_moco", + "Version": "SCT v6.1", + "Description": "Mean image across directions after motion correction" + } + ] +} \ No newline at end of file diff --git a/derivatives/data_preprocessed/sub-vuiisIngenia06/anat/sub-vuiisIngenia06_space-other_T2star.nii.gz b/derivatives/data_preprocessed/sub-vuiisIngenia06/anat/sub-vuiisIngenia06_space-other_T2star.nii.gz index b442547500..8cd809390e 100644 --- a/derivatives/data_preprocessed/sub-vuiisIngenia06/anat/sub-vuiisIngenia06_space-other_T2star.nii.gz +++ b/derivatives/data_preprocessed/sub-vuiisIngenia06/anat/sub-vuiisIngenia06_space-other_T2star.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s8876799--d7562ff689c5a872fc55e2a6a611011b420f2523adc66f8abcc0f21aa35b33b8.nii.gz +/annex/objects/SHA256E-s8876811--09fd2180b726b3dd38ac65d6a31f8184af6a83a7de4c4356b8799f8cfbba999e.nii.gz diff --git a/derivatives/data_preprocessed/sub-vuiisIngenia06/dwi/sub-vuiisIngenia06_rec-average_dwi.json b/derivatives/data_preprocessed/sub-vuiisIngenia06/dwi/sub-vuiisIngenia06_rec-average_dwi.json new file mode 100644 index 0000000000..a218d9b38a --- /dev/null +++ b/derivatives/data_preprocessed/sub-vuiisIngenia06/dwi/sub-vuiisIngenia06_rec-average_dwi.json @@ -0,0 +1,9 @@ +{ + "GeneratedBy": [ + { + "Name": "sct_dmri_moco", + "Version": "SCT v6.1", + "Description": "Mean image across directions after motion correction" + } + ] +} \ No newline at end of file From 2fc6d8c94146c0a7ad98183d4bed8f157ae4a2f6 Mon Sep 17 00:00:00 2001 From: Sandrine Bedard Date: Tue, 20 Feb 2024 10:18:42 -0500 Subject: [PATCH 09/21] reorient T2star --- .../anat/sub-amu01_space-other_T2star_label-SC_softseg.nii.gz | 2 +- .../anat/sub-amu02_space-other_T2star_label-SC_softseg.nii.gz | 2 +- .../anat/sub-amu03_space-other_T2star_label-SC_softseg.nii.gz | 2 +- .../anat/sub-amu04_space-other_T2star_label-SC_softseg.nii.gz | 2 +- .../anat/sub-amu05_space-other_T2star_label-SC_softseg.nii.gz | 2 +- .../sub-balgrist01_space-other_T2star_label-SC_softseg.nii.gz | 2 +- .../sub-balgrist02_space-other_T2star_label-SC_softseg.nii.gz | 2 +- .../sub-balgrist03_space-other_T2star_label-SC_softseg.nii.gz | 2 +- .../sub-balgrist04_space-other_T2star_label-SC_softseg.nii.gz | 2 +- .../sub-balgrist05_space-other_T2star_label-SC_softseg.nii.gz | 2 +- .../sub-balgrist06_space-other_T2star_label-SC_softseg.nii.gz | 2 +- .../sub-barcelona01_space-other_T2star_label-SC_softseg.nii.gz | 2 +- .../sub-barcelona02_space-other_T2star_label-SC_softseg.nii.gz | 2 +- .../sub-barcelona03_space-other_T2star_label-SC_softseg.nii.gz | 2 +- .../sub-barcelona04_space-other_T2star_label-SC_softseg.nii.gz | 2 +- .../sub-barcelona05_space-other_T2star_label-SC_softseg.nii.gz | 2 +- .../sub-barcelona06_space-other_T2star_label-SC_softseg.nii.gz | 2 +- .../sub-beijingGE01_space-other_T2star_label-SC_softseg.nii.gz | 2 +- .../sub-beijingGE02_space-other_T2star_label-SC_softseg.nii.gz | 2 +- .../sub-beijingGE03_space-other_T2star_label-SC_softseg.nii.gz | 2 +- .../sub-beijingGE04_space-other_T2star_label-SC_softseg.nii.gz | 2 +- ...b-beijingPrisma01_space-other_T2star_label-SC_softseg.nii.gz | 2 +- ...b-beijingPrisma02_space-other_T2star_label-SC_softseg.nii.gz | 2 +- ...b-beijingPrisma03_space-other_T2star_label-SC_softseg.nii.gz | 2 +- ...b-beijingPrisma04_space-other_T2star_label-SC_softseg.nii.gz | 2 +- ...b-beijingPrisma05_space-other_T2star_label-SC_softseg.nii.gz | 2 +- ...ub-beijingVerio01_space-other_T2star_label-SC_softseg.nii.gz | 2 +- ...ub-beijingVerio02_space-other_T2star_label-SC_softseg.nii.gz | 2 +- ...ub-beijingVerio03_space-other_T2star_label-SC_softseg.nii.gz | 2 +- ...ub-beijingVerio04_space-other_T2star_label-SC_softseg.nii.gz | 2 +- .../sub-brnoCeitec01_space-other_T2star_label-SC_softseg.nii.gz | 2 +- .../sub-brnoCeitec02_space-other_T2star_label-SC_softseg.nii.gz | 2 +- .../sub-brnoCeitec03_space-other_T2star_label-SC_softseg.nii.gz | 2 +- .../sub-brnoCeitec04_space-other_T2star_label-SC_softseg.nii.gz | 2 +- .../sub-brnoCeitec05_space-other_T2star_label-SC_softseg.nii.gz | 2 +- .../sub-brnoCeitec06_space-other_T2star_label-SC_softseg.nii.gz | 2 +- .../sub-brnoUhb01_space-other_T2star_label-SC_softseg.nii.gz | 2 +- .../sub-brnoUhb04_space-other_T2star_label-SC_softseg.nii.gz | 2 +- .../sub-brnoUhb05_space-other_T2star_label-SC_softseg.nii.gz | 2 +- .../sub-brnoUhb06_space-other_T2star_label-SC_softseg.nii.gz | 2 +- .../sub-cardiff01_space-other_T2star_label-SC_softseg.nii.gz | 2 +- .../sub-cardiff02_space-other_T2star_label-SC_softseg.nii.gz | 2 +- .../sub-cardiff03_space-other_T2star_label-SC_softseg.nii.gz | 2 +- .../sub-cardiff04_space-other_T2star_label-SC_softseg.nii.gz | 2 +- .../sub-cardiff05_space-other_T2star_label-SC_softseg.nii.gz | 2 +- .../sub-cardiff06_space-other_T2star_label-SC_softseg.nii.gz | 2 +- 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...chieva04_space-other_T2star_desc-softseg_label-SC_seg.nii.gz | 2 +- ...chieva05_space-other_T2star_desc-softseg_label-SC_seg.nii.gz | 2 +- ...chieva06_space-other_T2star_desc-softseg_label-SC_seg.nii.gz | 2 +- ...ngenia01_space-other_T2star_desc-softseg_label-SC_seg.nii.gz | 2 +- ...ngenia02_space-other_T2star_desc-softseg_label-SC_seg.nii.gz | 2 +- ...ngenia03_space-other_T2star_desc-softseg_label-SC_seg.nii.gz | 2 +- ...ngenia04_space-other_T2star_desc-softseg_label-SC_seg.nii.gz | 2 +- ...ngenia05_space-other_T2star_desc-softseg_label-SC_seg.nii.gz | 2 +- ...ngenia06_space-other_T2star_desc-softseg_label-SC_seg.nii.gz | 2 +- 503 files changed, 503 insertions(+), 503 deletions(-) diff --git a/derivatives/labels_softseg/sub-amu01/anat/sub-amu01_space-other_T2star_label-SC_softseg.nii.gz b/derivatives/labels_softseg/sub-amu01/anat/sub-amu01_space-other_T2star_label-SC_softseg.nii.gz index 360612388e..4e13236a2d 100644 --- a/derivatives/labels_softseg/sub-amu01/anat/sub-amu01_space-other_T2star_label-SC_softseg.nii.gz +++ b/derivatives/labels_softseg/sub-amu01/anat/sub-amu01_space-other_T2star_label-SC_softseg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s82558--49ea4368481b878796a3aaf0868589a5ab4d8379fa2ed43cac1768935c35105d.nii.gz +/annex/objects/SHA256E-s82582--675d8146574860567ae0c92e7aeb9af522553fe244b0ea8c18e2292e772f2d69.nii.gz diff --git a/derivatives/labels_softseg/sub-amu02/anat/sub-amu02_space-other_T2star_label-SC_softseg.nii.gz b/derivatives/labels_softseg/sub-amu02/anat/sub-amu02_space-other_T2star_label-SC_softseg.nii.gz index 833b026443..6a0d70ca62 100644 --- a/derivatives/labels_softseg/sub-amu02/anat/sub-amu02_space-other_T2star_label-SC_softseg.nii.gz +++ b/derivatives/labels_softseg/sub-amu02/anat/sub-amu02_space-other_T2star_label-SC_softseg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s87536--f0c3b1ecf64993eb5008a611f6dc11f8e58c7edbe439aeac7e0b73ef8f4f698d.nii.gz 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100644 --- a/derivatives/labels_softseg/sub-amu04/anat/sub-amu04_space-other_T2star_label-SC_softseg.nii.gz +++ b/derivatives/labels_softseg/sub-amu04/anat/sub-amu04_space-other_T2star_label-SC_softseg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s82926--8b09ca1b1a8024d3ea1b4cb209eb5aa8582424d25bd16362624dfbf6ca12282b.nii.gz +/annex/objects/SHA256E-s82947--7f530b1f203f37a97f55d7351bde3d379dca6e7fbca946b136aaea516aaf82fa.nii.gz diff --git a/derivatives/labels_softseg/sub-amu05/anat/sub-amu05_space-other_T2star_label-SC_softseg.nii.gz b/derivatives/labels_softseg/sub-amu05/anat/sub-amu05_space-other_T2star_label-SC_softseg.nii.gz index 5530cdf203..6ace85b3d2 100644 --- a/derivatives/labels_softseg/sub-amu05/anat/sub-amu05_space-other_T2star_label-SC_softseg.nii.gz +++ b/derivatives/labels_softseg/sub-amu05/anat/sub-amu05_space-other_T2star_label-SC_softseg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s80276--4847edd24d94f7bc98f18325f63c5a643b62011563f0e897c7fc95ddb95c532e.nii.gz 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100644 --- a/derivatives/labels_softseg_bin/sub-mountSinai01/anat/sub-mountSinai01_space-other_T2star_desc-softseg_label-SC_seg.nii.gz +++ b/derivatives/labels_softseg_bin/sub-mountSinai01/anat/sub-mountSinai01_space-other_T2star_desc-softseg_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s14629--0a310fb46b934cd8f42889724e41ce1b7d765375d9d62ef1cbe4884cafdd4633.nii.gz +/annex/objects/SHA256E-s14657--c00c7d298eebb907a16d108494f094cb8074cce213a24685d4fb447ade560c92.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-mountSinai02/anat/sub-mountSinai02_space-other_T2star_desc-softseg_label-SC_seg.nii.gz b/derivatives/labels_softseg_bin/sub-mountSinai02/anat/sub-mountSinai02_space-other_T2star_desc-softseg_label-SC_seg.nii.gz index 3740167195..9775b380ca 100644 --- a/derivatives/labels_softseg_bin/sub-mountSinai02/anat/sub-mountSinai02_space-other_T2star_desc-softseg_label-SC_seg.nii.gz +++ 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a/derivatives/labels_softseg_bin/sub-vallHebron07/anat/sub-vallHebron07_space-other_T2star_desc-softseg_label-SC_seg.nii.gz +++ b/derivatives/labels_softseg_bin/sub-vallHebron07/anat/sub-vallHebron07_space-other_T2star_desc-softseg_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s14738--2c64ab482744e49dd99473beb2dd7d3b64e1fa98398e5bc6390e8a58a93fb1c8.nii.gz +/annex/objects/SHA256E-s14768--6e41c1e78d790a93b44e6e7af5a911758a93cff6c669927ce1fbd11fc1ebed22.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-vuiisAchieva01/anat/sub-vuiisAchieva01_space-other_T2star_desc-softseg_label-SC_seg.nii.gz b/derivatives/labels_softseg_bin/sub-vuiisAchieva01/anat/sub-vuiisAchieva01_space-other_T2star_desc-softseg_label-SC_seg.nii.gz index 98af5df584..6865dcb472 100644 --- a/derivatives/labels_softseg_bin/sub-vuiisAchieva01/anat/sub-vuiisAchieva01_space-other_T2star_desc-softseg_label-SC_seg.nii.gz +++ b/derivatives/labels_softseg_bin/sub-vuiisAchieva01/anat/sub-vuiisAchieva01_space-other_T2star_desc-softseg_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s8105--f5bfe03b7de26f123fe263c9d3a1a1d6584b27566080d8548604a9e3ca4321f6.nii.gz +/annex/objects/SHA256E-s8133--98b80c27211311831ac35cba543993a1f9f25a030ab35f5282ee68c6378c2968.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-vuiisAchieva02/anat/sub-vuiisAchieva02_space-other_T2star_desc-softseg_label-SC_seg.nii.gz b/derivatives/labels_softseg_bin/sub-vuiisAchieva02/anat/sub-vuiisAchieva02_space-other_T2star_desc-softseg_label-SC_seg.nii.gz index e19f2323ba..3655b2bb70 100644 --- a/derivatives/labels_softseg_bin/sub-vuiisAchieva02/anat/sub-vuiisAchieva02_space-other_T2star_desc-softseg_label-SC_seg.nii.gz +++ b/derivatives/labels_softseg_bin/sub-vuiisAchieva02/anat/sub-vuiisAchieva02_space-other_T2star_desc-softseg_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s8232--f93d7adba6271916b78434f30768b3c56ae252473edfd4d32c3b037b2942bcfa.nii.gz +/annex/objects/SHA256E-s8259--7d6b246fb5e67b32d764e2f842cd3c7d60ec40e951193343ece2565bdc3fe3c4.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-vuiisAchieva03/anat/sub-vuiisAchieva03_space-other_T2star_desc-softseg_label-SC_seg.nii.gz b/derivatives/labels_softseg_bin/sub-vuiisAchieva03/anat/sub-vuiisAchieva03_space-other_T2star_desc-softseg_label-SC_seg.nii.gz index dc97daa450..e4c28015c8 100644 --- a/derivatives/labels_softseg_bin/sub-vuiisAchieva03/anat/sub-vuiisAchieva03_space-other_T2star_desc-softseg_label-SC_seg.nii.gz +++ b/derivatives/labels_softseg_bin/sub-vuiisAchieva03/anat/sub-vuiisAchieva03_space-other_T2star_desc-softseg_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s8159--8957e3b56c61f561876acde0231f51c9fee1ed1df196e95f017e3a0ed0159bab.nii.gz +/annex/objects/SHA256E-s8187--ece7602c242d5878be1a439d314aec7dda8a040094bfbe5b3b861a4bbe8d6827.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-vuiisAchieva04/anat/sub-vuiisAchieva04_space-other_T2star_desc-softseg_label-SC_seg.nii.gz b/derivatives/labels_softseg_bin/sub-vuiisAchieva04/anat/sub-vuiisAchieva04_space-other_T2star_desc-softseg_label-SC_seg.nii.gz index f0d01b46af..33f62965fc 100644 --- a/derivatives/labels_softseg_bin/sub-vuiisAchieva04/anat/sub-vuiisAchieva04_space-other_T2star_desc-softseg_label-SC_seg.nii.gz +++ b/derivatives/labels_softseg_bin/sub-vuiisAchieva04/anat/sub-vuiisAchieva04_space-other_T2star_desc-softseg_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s8110--b756d7752c76582d6f13e20ba399a3d054784d6e0954bd5361b242763ac58076.nii.gz +/annex/objects/SHA256E-s8138--be647d466d97edbb1973b78e7ebab9a1ac78f9541b4943fef73601ac3fe36ff4.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-vuiisAchieva05/anat/sub-vuiisAchieva05_space-other_T2star_desc-softseg_label-SC_seg.nii.gz b/derivatives/labels_softseg_bin/sub-vuiisAchieva05/anat/sub-vuiisAchieva05_space-other_T2star_desc-softseg_label-SC_seg.nii.gz index c276e6d5cf..edd9700a70 100644 --- a/derivatives/labels_softseg_bin/sub-vuiisAchieva05/anat/sub-vuiisAchieva05_space-other_T2star_desc-softseg_label-SC_seg.nii.gz +++ b/derivatives/labels_softseg_bin/sub-vuiisAchieva05/anat/sub-vuiisAchieva05_space-other_T2star_desc-softseg_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s8144--f398460faabb8f9ecd5aa2e139e19610eccffcc8901d5bce6b7eefac386cdea1.nii.gz +/annex/objects/SHA256E-s8172--b72fcd01c3bf1844c2b66ebd9712ecbd4faa644b3d127e3dd1d6a24195e153e5.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-vuiisAchieva06/anat/sub-vuiisAchieva06_space-other_T2star_desc-softseg_label-SC_seg.nii.gz b/derivatives/labels_softseg_bin/sub-vuiisAchieva06/anat/sub-vuiisAchieva06_space-other_T2star_desc-softseg_label-SC_seg.nii.gz index 6054cd3e95..3a1d12dc17 100644 --- a/derivatives/labels_softseg_bin/sub-vuiisAchieva06/anat/sub-vuiisAchieva06_space-other_T2star_desc-softseg_label-SC_seg.nii.gz +++ b/derivatives/labels_softseg_bin/sub-vuiisAchieva06/anat/sub-vuiisAchieva06_space-other_T2star_desc-softseg_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s8123--4b37a04e94adcfc0624f59ba164d06b6014e7ea4ee2f895c7386fd59e4f0b9e4.nii.gz +/annex/objects/SHA256E-s8152--5838b0750f7ac95ae7ea5af8ff60f8f28f7f43bafad90bb747c9fefa6a8d5b97.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-vuiisIngenia01/anat/sub-vuiisIngenia01_space-other_T2star_desc-softseg_label-SC_seg.nii.gz b/derivatives/labels_softseg_bin/sub-vuiisIngenia01/anat/sub-vuiisIngenia01_space-other_T2star_desc-softseg_label-SC_seg.nii.gz index d760cefde0..f36f3546c1 100644 --- a/derivatives/labels_softseg_bin/sub-vuiisIngenia01/anat/sub-vuiisIngenia01_space-other_T2star_desc-softseg_label-SC_seg.nii.gz +++ b/derivatives/labels_softseg_bin/sub-vuiisIngenia01/anat/sub-vuiisIngenia01_space-other_T2star_desc-softseg_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s8239--ea769bc76e1e02e829d71b7105855c64ecd20094d89c394ddd19d14ff449ed1a.nii.gz +/annex/objects/SHA256E-s8270--9dc264cd7d327511942020beabb1dd67f040f46ea409bc596bc630d710c5ad69.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-vuiisIngenia02/anat/sub-vuiisIngenia02_space-other_T2star_desc-softseg_label-SC_seg.nii.gz b/derivatives/labels_softseg_bin/sub-vuiisIngenia02/anat/sub-vuiisIngenia02_space-other_T2star_desc-softseg_label-SC_seg.nii.gz index d366e1c7a4..69169ee50d 100644 --- a/derivatives/labels_softseg_bin/sub-vuiisIngenia02/anat/sub-vuiisIngenia02_space-other_T2star_desc-softseg_label-SC_seg.nii.gz +++ b/derivatives/labels_softseg_bin/sub-vuiisIngenia02/anat/sub-vuiisIngenia02_space-other_T2star_desc-softseg_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s8275--2dd07e342b742bc710af9c26097fbbabd338fac49dc5f6d62b96aa71cda97f5b.nii.gz +/annex/objects/SHA256E-s8302--b57c2f3b52d6aa93586825735b2b8122254dee623302240d0ab127adb8500f77.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-vuiisIngenia03/anat/sub-vuiisIngenia03_space-other_T2star_desc-softseg_label-SC_seg.nii.gz b/derivatives/labels_softseg_bin/sub-vuiisIngenia03/anat/sub-vuiisIngenia03_space-other_T2star_desc-softseg_label-SC_seg.nii.gz index cc1d725250..d02c8ffe3a 100644 --- a/derivatives/labels_softseg_bin/sub-vuiisIngenia03/anat/sub-vuiisIngenia03_space-other_T2star_desc-softseg_label-SC_seg.nii.gz +++ b/derivatives/labels_softseg_bin/sub-vuiisIngenia03/anat/sub-vuiisIngenia03_space-other_T2star_desc-softseg_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s8156--4c98eff0392c365ac24bc9110e53c6da73136007c790c0b2ff656a887617903f.nii.gz +/annex/objects/SHA256E-s8185--bf07b2b079bd42d38b683232b78263b86453f70a80ed369cbfbd939b28cf5520.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-vuiisIngenia04/anat/sub-vuiisIngenia04_space-other_T2star_desc-softseg_label-SC_seg.nii.gz b/derivatives/labels_softseg_bin/sub-vuiisIngenia04/anat/sub-vuiisIngenia04_space-other_T2star_desc-softseg_label-SC_seg.nii.gz index 43bbe128f2..8ee06caba8 100644 --- a/derivatives/labels_softseg_bin/sub-vuiisIngenia04/anat/sub-vuiisIngenia04_space-other_T2star_desc-softseg_label-SC_seg.nii.gz +++ b/derivatives/labels_softseg_bin/sub-vuiisIngenia04/anat/sub-vuiisIngenia04_space-other_T2star_desc-softseg_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s8078--d02720d45ded7dc2d33193f8e4aec2653d4893b1f13668a70292a6f8254d2bb1.nii.gz +/annex/objects/SHA256E-s8106--0adf99368760b9f969c326b50d1be8386b0c7f46700099435a6007a5771ebe23.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-vuiisIngenia05/anat/sub-vuiisIngenia05_space-other_T2star_desc-softseg_label-SC_seg.nii.gz b/derivatives/labels_softseg_bin/sub-vuiisIngenia05/anat/sub-vuiisIngenia05_space-other_T2star_desc-softseg_label-SC_seg.nii.gz index f8e611d640..f595b33a47 100644 --- a/derivatives/labels_softseg_bin/sub-vuiisIngenia05/anat/sub-vuiisIngenia05_space-other_T2star_desc-softseg_label-SC_seg.nii.gz +++ b/derivatives/labels_softseg_bin/sub-vuiisIngenia05/anat/sub-vuiisIngenia05_space-other_T2star_desc-softseg_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s8207--7d43aafdc1bf2799fc5c05952503d5042d71411b0e16582c8c69c963df057354.nii.gz +/annex/objects/SHA256E-s8234--9f76724c016b1d7cc825b9d0e6d27407c796c621e79af2f30a114cca13c0a534.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-vuiisIngenia06/anat/sub-vuiisIngenia06_space-other_T2star_desc-softseg_label-SC_seg.nii.gz b/derivatives/labels_softseg_bin/sub-vuiisIngenia06/anat/sub-vuiisIngenia06_space-other_T2star_desc-softseg_label-SC_seg.nii.gz index bd4ba041b4..d715f49add 100644 --- a/derivatives/labels_softseg_bin/sub-vuiisIngenia06/anat/sub-vuiisIngenia06_space-other_T2star_desc-softseg_label-SC_seg.nii.gz +++ b/derivatives/labels_softseg_bin/sub-vuiisIngenia06/anat/sub-vuiisIngenia06_space-other_T2star_desc-softseg_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s8186--dfefbc8ed953fcba13b6295a72f0966bf819f4ae8b9ce0707f66db2f8c3e73dd.nii.gz +/annex/objects/SHA256E-s8214--89743f32a0ff1c7d642db4c6a6e3997377a44240ebe17293922d16ba6c85fa8f.nii.gz From 954309f28cad271225a0813d13b4621b3a4130a7 Mon Sep 17 00:00:00 2001 From: Sandrine Bedard Date: Tue, 20 Feb 2024 10:18:58 -0500 Subject: [PATCH 10/21] update code to create json --- code/update_json.py | 23 +++++++++++++---------- 1 file changed, 13 insertions(+), 10 deletions(-) diff --git a/code/update_json.py b/code/update_json.py index ba3c3d722c..fa589c8d65 100644 --- a/code/update_json.py +++ b/code/update_json.py @@ -15,21 +15,24 @@ def get_parser(): return parser -def create_json_file(nii_gz_files): +def create_json_file(nii_gz_files, resampling_factor): """Creates a JSON file listing all .nii.gz files and includes the resampling factor. Args: nii_gz_files (list): A list of paths to .nii.gz files. """ data = { - "SpatialReference": { - "Orientation": "RPI" - }, + #"SpatialReference": { + # "Orientation": "RPI", + # "Resampling": resampling_factor, + # }, "GeneratedBy":[ { - "Name": "sct_register_multimodal", + "Name": "sct_dmri_moco", "Version": "SCT v6.1", - "Description": "Warp from T2w discs labels" + #"Author": "Paul Bautin", + #"Date": "2020-07-30 11:57:54", + "Description": "Mean image across directions after motion correction" }] } for file in nii_gz_files: @@ -50,7 +53,7 @@ def add_spatial_reference(file_path, resampling_factor): # Add the "SpatialReference" field data["SpatialReference"] = { - # "Resampling": resampling_factor, + "Resampling": resampling_factor, "Reorientation": "RPI", "Other": "root-mean square across 4th dimension (if it exists)" } @@ -75,7 +78,7 @@ def find_nii_gz_files(directory): nii_gz_files = [] for root, _, files in os.walk(directory): for file in files: - if ('label-discs_desc-warp_dlabel.nii.gz' in file): + if ('rec-average_dwi.nii.gz' in file): nii_gz_files.append(os.path.join(root, file)) return nii_gz_files @@ -89,7 +92,7 @@ def process_directory(directory, resampling_factor): """ for root, _, files in os.walk(directory): for file in files: - if ('T2star' in file) and ('.json' in file): + if ('T2w' in file) and ('.json' in file): file_path = os.path.join(root, file) add_spatial_reference(file_path, resampling_factor) print(f"Updated {file_path}") @@ -99,7 +102,7 @@ def main(): args = parser.parse_args() #process_directory(args.d, args.r) nii_gz_files = find_nii_gz_files(args.d) - create_json_file(nii_gz_files) + create_json_file(nii_gz_files, args.r) if __name__ == "__main__": main() \ No newline at end of file From 3404ea4adc9b01afbc0670393fc7f92aff984aae Mon Sep 17 00:00:00 2001 From: Sandrine Bedard Date: Tue, 20 Feb 2024 11:25:32 -0500 Subject: [PATCH 11/21] remove duplicates of softseg to adress issue 151 --- .../anat/sub-balgrist02_flip-1_mt-on_space-other_MTS.json | 4 ---- .../sub-balgrist02_flip-1_mt-on_space-other_MTS.nii.gz | 1 - .../sub-barcelona02_flip-1_mt-on_space-other_MTS.json | 4 ---- .../sub-barcelona02_flip-1_mt-on_space-other_MTS.nii.gz | 1 - .../anat/sub-barcelona02_space-other_T2w.json | 8 -------- .../anat/sub-barcelona02_space-other_T2w.nii.gz | 1 - .../anat/sub-brnoCeitec01_space-other_T1w.json | 8 -------- .../anat/sub-brnoCeitec01_space-other_T1w.nii.gz | 1 - 8 files changed, 28 deletions(-) delete mode 100644 derivatives/labels_softseg/sub-balgrist02/anat/sub-balgrist02_flip-1_mt-on_space-other_MTS.json delete mode 100644 derivatives/labels_softseg/sub-balgrist02/anat/sub-balgrist02_flip-1_mt-on_space-other_MTS.nii.gz delete mode 100644 derivatives/labels_softseg/sub-barcelona02/anat/sub-barcelona02_flip-1_mt-on_space-other_MTS.json delete mode 100644 derivatives/labels_softseg/sub-barcelona02/anat/sub-barcelona02_flip-1_mt-on_space-other_MTS.nii.gz delete mode 100644 derivatives/labels_softseg/sub-barcelona02/anat/sub-barcelona02_space-other_T2w.json delete mode 100644 derivatives/labels_softseg/sub-barcelona02/anat/sub-barcelona02_space-other_T2w.nii.gz delete mode 100644 derivatives/labels_softseg/sub-brnoCeitec01/anat/sub-brnoCeitec01_space-other_T1w.json delete mode 100644 derivatives/labels_softseg/sub-brnoCeitec01/anat/sub-brnoCeitec01_space-other_T1w.nii.gz diff --git a/derivatives/labels_softseg/sub-balgrist02/anat/sub-balgrist02_flip-1_mt-on_space-other_MTS.json b/derivatives/labels_softseg/sub-balgrist02/anat/sub-balgrist02_flip-1_mt-on_space-other_MTS.json deleted file mode 100644 index f0730dca86..0000000000 --- a/derivatives/labels_softseg/sub-balgrist02/anat/sub-balgrist02_flip-1_mt-on_space-other_MTS.json +++ /dev/null @@ -1,4 +0,0 @@ -{ - "Author": "Sandrine Bedard", - "Date": "2021-09-05 18:49:27" -} \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-balgrist02/anat/sub-balgrist02_flip-1_mt-on_space-other_MTS.nii.gz b/derivatives/labels_softseg/sub-balgrist02/anat/sub-balgrist02_flip-1_mt-on_space-other_MTS.nii.gz deleted file mode 100644 index 18e47522ba..0000000000 --- a/derivatives/labels_softseg/sub-balgrist02/anat/sub-balgrist02_flip-1_mt-on_space-other_MTS.nii.gz +++ /dev/null @@ -1 +0,0 @@ -/annex/objects/SHA256E-s74042--4881b40d1fef57f6748d7b5174e907b15b1e2aca70d7d6c4d2220fd9b3947ab4.nii.gz diff --git a/derivatives/labels_softseg/sub-barcelona02/anat/sub-barcelona02_flip-1_mt-on_space-other_MTS.json b/derivatives/labels_softseg/sub-barcelona02/anat/sub-barcelona02_flip-1_mt-on_space-other_MTS.json deleted file mode 100644 index 30ac697242..0000000000 --- a/derivatives/labels_softseg/sub-barcelona02/anat/sub-barcelona02_flip-1_mt-on_space-other_MTS.json +++ /dev/null @@ -1,4 +0,0 @@ -{ - "Author": "Sandrine Bedard", - "Date": "2021-09-05 18:49:37" -} \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-barcelona02/anat/sub-barcelona02_flip-1_mt-on_space-other_MTS.nii.gz b/derivatives/labels_softseg/sub-barcelona02/anat/sub-barcelona02_flip-1_mt-on_space-other_MTS.nii.gz deleted file mode 100644 index 9cb05cf4e5..0000000000 --- a/derivatives/labels_softseg/sub-barcelona02/anat/sub-barcelona02_flip-1_mt-on_space-other_MTS.nii.gz +++ /dev/null @@ -1 +0,0 @@ -/annex/objects/SHA256E-s76897--aaacfc5f9f2fa467ed69e0a1d0552cc8938010e24c2e837f748ee59ec200dde0.nii.gz diff --git a/derivatives/labels_softseg/sub-barcelona02/anat/sub-barcelona02_space-other_T2w.json b/derivatives/labels_softseg/sub-barcelona02/anat/sub-barcelona02_space-other_T2w.json deleted file mode 100644 index 28187b8a10..0000000000 --- a/derivatives/labels_softseg/sub-barcelona02/anat/sub-barcelona02_space-other_T2w.json +++ /dev/null @@ -1,8 +0,0 @@ -{ - "Author": "Sandrine Bedard", - "Date": "2021-09-05 18:49:36", - "SpatialReference": { - "Resampling": "0.8x0.8x0.8", - "Reorientation": "RPI" - } -} \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-barcelona02/anat/sub-barcelona02_space-other_T2w.nii.gz b/derivatives/labels_softseg/sub-barcelona02/anat/sub-barcelona02_space-other_T2w.nii.gz deleted file mode 100644 index 5aedca6b89..0000000000 --- a/derivatives/labels_softseg/sub-barcelona02/anat/sub-barcelona02_space-other_T2w.nii.gz +++ /dev/null @@ -1 +0,0 @@ -/annex/objects/SHA256E-s64615--b5adcd937209f64475c11fdd8bc886ae59e91c0cb8e0dd4a40dabf62a1a4b700.nii.gz diff --git a/derivatives/labels_softseg/sub-brnoCeitec01/anat/sub-brnoCeitec01_space-other_T1w.json b/derivatives/labels_softseg/sub-brnoCeitec01/anat/sub-brnoCeitec01_space-other_T1w.json deleted file mode 100644 index 268a3bd9f3..0000000000 --- a/derivatives/labels_softseg/sub-brnoCeitec01/anat/sub-brnoCeitec01_space-other_T1w.json +++ /dev/null @@ -1,8 +0,0 @@ -{ - "Author": "Sandrine Bedard", - "Date": "2021-09-05 18:49:38", - "SpatialReference": { - "Resampling": "1x1x1", - "Reorientation": "RPI" - } -} \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-brnoCeitec01/anat/sub-brnoCeitec01_space-other_T1w.nii.gz b/derivatives/labels_softseg/sub-brnoCeitec01/anat/sub-brnoCeitec01_space-other_T1w.nii.gz deleted file mode 100644 index 87ad9f092a..0000000000 --- a/derivatives/labels_softseg/sub-brnoCeitec01/anat/sub-brnoCeitec01_space-other_T1w.nii.gz +++ /dev/null @@ -1 +0,0 @@ -/annex/objects/SHA256E-s698794--d60df185a9a363748248f9b5dde7e1fc7c23beb14c0fda9be70dceba71596bbb.nii.gz From 6c3e924ea18f8596e2bea88488f9053d73ea239d Mon Sep 17 00:00:00 2001 From: Sandrine Bedard Date: Tue, 20 Feb 2024 12:43:02 -0500 Subject: [PATCH 12/21] change GM name --- ...json => sub-fslAchieva01_space-other_T2star_label-GM_seg.json} | 0 ...gz => sub-fslAchieva01_space-other_T2star_label-GM_seg.nii.gz} | 0 ...json => sub-fslAchieva04_space-other_T2star_label-GM_seg.json} | 0 ...gz => sub-fslAchieva04_space-other_T2star_label-GM_seg.nii.gz} | 0 ...C_seg.json => sub-mniS05_space-other_T2star_label-GM_seg.json} | 0 ...g.nii.gz => sub-mniS05_space-other_T2star_label-GM_seg.nii.gz} | 0 ...eg.json => sub-nottwil01_space-other_T2star_label-GM_seg.json} | 0 ...ii.gz => sub-nottwil01_space-other_T2star_label-GM_seg.nii.gz} | 0 ...eg.json => sub-nottwil03_space-other_T2star_label-GM_seg.json} | 0 ...ii.gz => sub-nottwil03_space-other_T2star_label-GM_seg.nii.gz} | 0 ...json => sub-sherbrooke01_space-other_T2star_label-GM_seg.json} | 0 ...gz => sub-sherbrooke01_space-other_T2star_label-GM_seg.nii.gz} | 0 ...json => sub-sherbrooke03_space-other_T2star_label-GM_seg.json} | 0 ...gz => sub-sherbrooke03_space-other_T2star_label-GM_seg.nii.gz} | 0 ...g.json => sub-stanford06_space-other_T2star_label-GM_seg.json} | 0 ...i.gz => sub-stanford06_space-other_T2star_label-GM_seg.nii.gz} | 0 ....json => sub-tokyo750w05_space-other_T2star_label-GM_seg.json} | 0 ....gz => sub-tokyo750w05_space-other_T2star_label-GM_seg.nii.gz} | 0 ....json => sub-tokyo750w06_space-other_T2star_label-GM_seg.json} | 0 ....gz => sub-tokyo750w06_space-other_T2star_label-GM_seg.nii.gz} | 0 ...on => sub-tokyoIngenia01_space-other_T2star_label-GM_seg.json} | 0 ... => sub-tokyoIngenia01_space-other_T2star_label-GM_seg.nii.gz} | 0 ...on => sub-tokyoIngenia02_space-other_T2star_label-GM_seg.json} | 0 ... => sub-tokyoIngenia02_space-other_T2star_label-GM_seg.nii.gz} | 0 ...on => sub-tokyoIngenia03_space-other_T2star_label-GM_seg.json} | 0 ... => sub-tokyoIngenia03_space-other_T2star_label-GM_seg.nii.gz} | 0 ...on => sub-tokyoIngenia04_space-other_T2star_label-GM_seg.json} | 0 ... => sub-tokyoIngenia04_space-other_T2star_label-GM_seg.nii.gz} | 0 ...json => sub-tokyoSkyra03_space-other_T2star_label-GM_seg.json} | 0 ...gz => sub-tokyoSkyra03_space-other_T2star_label-GM_seg.nii.gz} | 0 ...json => sub-tokyoSkyra04_space-other_T2star_label-GM_seg.json} | 0 ...gz => sub-tokyoSkyra04_space-other_T2star_label-GM_seg.nii.gz} | 0 ...on => sub-vuiisAchieva01_space-other_T2star_label-GM_seg.json} | 0 ... => sub-vuiisAchieva01_space-other_T2star_label-GM_seg.nii.gz} | 0 ...on => sub-vuiisIngenia03_space-other_T2star_label-GM_seg.json} | 0 ... => sub-vuiisIngenia03_space-other_T2star_label-GM_seg.nii.gz} | 0 36 files changed, 0 insertions(+), 0 deletions(-) rename derivatives/labels/sub-fslAchieva01/anat/{sub-fslAchieva01_space-other_T2star_gmlabel-SC_seg.json => sub-fslAchieva01_space-other_T2star_label-GM_seg.json} (100%) rename derivatives/labels/sub-fslAchieva01/anat/{sub-fslAchieva01_space-other_T2star_gmlabel-SC_seg.nii.gz => sub-fslAchieva01_space-other_T2star_label-GM_seg.nii.gz} (100%) rename derivatives/labels/sub-fslAchieva04/anat/{sub-fslAchieva04_space-other_T2star_gmlabel-SC_seg.json => sub-fslAchieva04_space-other_T2star_label-GM_seg.json} (100%) rename derivatives/labels/sub-fslAchieva04/anat/{sub-fslAchieva04_space-other_T2star_gmlabel-SC_seg.nii.gz => sub-fslAchieva04_space-other_T2star_label-GM_seg.nii.gz} (100%) rename derivatives/labels/sub-mniS05/anat/{sub-mniS05_space-other_T2star_gmlabel-SC_seg.json => sub-mniS05_space-other_T2star_label-GM_seg.json} (100%) rename derivatives/labels/sub-mniS05/anat/{sub-mniS05_space-other_T2star_gmlabel-SC_seg.nii.gz => sub-mniS05_space-other_T2star_label-GM_seg.nii.gz} (100%) rename derivatives/labels/sub-nottwil01/anat/{sub-nottwil01_space-other_T2star_gmlabel-SC_seg.json => sub-nottwil01_space-other_T2star_label-GM_seg.json} (100%) rename derivatives/labels/sub-nottwil01/anat/{sub-nottwil01_space-other_T2star_gmlabel-SC_seg.nii.gz => sub-nottwil01_space-other_T2star_label-GM_seg.nii.gz} (100%) rename derivatives/labels/sub-nottwil03/anat/{sub-nottwil03_space-other_T2star_gmlabel-SC_seg.json => sub-nottwil03_space-other_T2star_label-GM_seg.json} (100%) rename derivatives/labels/sub-nottwil03/anat/{sub-nottwil03_space-other_T2star_gmlabel-SC_seg.nii.gz => sub-nottwil03_space-other_T2star_label-GM_seg.nii.gz} (100%) rename derivatives/labels/sub-sherbrooke01/anat/{sub-sherbrooke01_space-other_T2star_gmlabel-SC_seg.json => sub-sherbrooke01_space-other_T2star_label-GM_seg.json} (100%) rename derivatives/labels/sub-sherbrooke01/anat/{sub-sherbrooke01_space-other_T2star_gmlabel-SC_seg.nii.gz => sub-sherbrooke01_space-other_T2star_label-GM_seg.nii.gz} (100%) rename derivatives/labels/sub-sherbrooke03/anat/{sub-sherbrooke03_space-other_T2star_gmlabel-SC_seg.json => sub-sherbrooke03_space-other_T2star_label-GM_seg.json} (100%) rename derivatives/labels/sub-sherbrooke03/anat/{sub-sherbrooke03_space-other_T2star_gmlabel-SC_seg.nii.gz => sub-sherbrooke03_space-other_T2star_label-GM_seg.nii.gz} (100%) rename derivatives/labels/sub-stanford06/anat/{sub-stanford06_space-other_T2star_gmlabel-SC_seg.json => sub-stanford06_space-other_T2star_label-GM_seg.json} (100%) rename derivatives/labels/sub-stanford06/anat/{sub-stanford06_space-other_T2star_gmlabel-SC_seg.nii.gz => sub-stanford06_space-other_T2star_label-GM_seg.nii.gz} (100%) rename derivatives/labels/sub-tokyo750w05/anat/{sub-tokyo750w05_space-other_T2star_gmlabel-SC_seg.json => sub-tokyo750w05_space-other_T2star_label-GM_seg.json} (100%) rename derivatives/labels/sub-tokyo750w05/anat/{sub-tokyo750w05_space-other_T2star_gmlabel-SC_seg.nii.gz => sub-tokyo750w05_space-other_T2star_label-GM_seg.nii.gz} (100%) rename derivatives/labels/sub-tokyo750w06/anat/{sub-tokyo750w06_space-other_T2star_gmlabel-SC_seg.json => sub-tokyo750w06_space-other_T2star_label-GM_seg.json} (100%) rename derivatives/labels/sub-tokyo750w06/anat/{sub-tokyo750w06_space-other_T2star_gmlabel-SC_seg.nii.gz => sub-tokyo750w06_space-other_T2star_label-GM_seg.nii.gz} (100%) rename derivatives/labels/sub-tokyoIngenia01/anat/{sub-tokyoIngenia01_space-other_T2star_gmlabel-SC_seg.json => sub-tokyoIngenia01_space-other_T2star_label-GM_seg.json} (100%) rename derivatives/labels/sub-tokyoIngenia01/anat/{sub-tokyoIngenia01_space-other_T2star_gmlabel-SC_seg.nii.gz => sub-tokyoIngenia01_space-other_T2star_label-GM_seg.nii.gz} (100%) rename derivatives/labels/sub-tokyoIngenia02/anat/{sub-tokyoIngenia02_space-other_T2star_gmlabel-SC_seg.json => sub-tokyoIngenia02_space-other_T2star_label-GM_seg.json} (100%) rename derivatives/labels/sub-tokyoIngenia02/anat/{sub-tokyoIngenia02_space-other_T2star_gmlabel-SC_seg.nii.gz => sub-tokyoIngenia02_space-other_T2star_label-GM_seg.nii.gz} (100%) rename derivatives/labels/sub-tokyoIngenia03/anat/{sub-tokyoIngenia03_space-other_T2star_gmlabel-SC_seg.json => sub-tokyoIngenia03_space-other_T2star_label-GM_seg.json} (100%) rename derivatives/labels/sub-tokyoIngenia03/anat/{sub-tokyoIngenia03_space-other_T2star_gmlabel-SC_seg.nii.gz => sub-tokyoIngenia03_space-other_T2star_label-GM_seg.nii.gz} (100%) rename derivatives/labels/sub-tokyoIngenia04/anat/{sub-tokyoIngenia04_space-other_T2star_gmlabel-SC_seg.json => sub-tokyoIngenia04_space-other_T2star_label-GM_seg.json} (100%) rename derivatives/labels/sub-tokyoIngenia04/anat/{sub-tokyoIngenia04_space-other_T2star_gmlabel-SC_seg.nii.gz => sub-tokyoIngenia04_space-other_T2star_label-GM_seg.nii.gz} (100%) rename derivatives/labels/sub-tokyoSkyra03/anat/{sub-tokyoSkyra03_space-other_T2star_gmlabel-SC_seg.json => sub-tokyoSkyra03_space-other_T2star_label-GM_seg.json} (100%) rename derivatives/labels/sub-tokyoSkyra03/anat/{sub-tokyoSkyra03_space-other_T2star_gmlabel-SC_seg.nii.gz => sub-tokyoSkyra03_space-other_T2star_label-GM_seg.nii.gz} (100%) rename derivatives/labels/sub-tokyoSkyra04/anat/{sub-tokyoSkyra04_space-other_T2star_gmlabel-SC_seg.json => sub-tokyoSkyra04_space-other_T2star_label-GM_seg.json} (100%) rename derivatives/labels/sub-tokyoSkyra04/anat/{sub-tokyoSkyra04_space-other_T2star_gmlabel-SC_seg.nii.gz => sub-tokyoSkyra04_space-other_T2star_label-GM_seg.nii.gz} (100%) rename derivatives/labels/sub-vuiisAchieva01/anat/{sub-vuiisAchieva01_space-other_T2star_gmlabel-SC_seg.json => sub-vuiisAchieva01_space-other_T2star_label-GM_seg.json} (100%) rename derivatives/labels/sub-vuiisAchieva01/anat/{sub-vuiisAchieva01_space-other_T2star_gmlabel-SC_seg.nii.gz => sub-vuiisAchieva01_space-other_T2star_label-GM_seg.nii.gz} (100%) rename derivatives/labels/sub-vuiisIngenia03/anat/{sub-vuiisIngenia03_space-other_T2star_gmlabel-SC_seg.json => sub-vuiisIngenia03_space-other_T2star_label-GM_seg.json} (100%) rename derivatives/labels/sub-vuiisIngenia03/anat/{sub-vuiisIngenia03_space-other_T2star_gmlabel-SC_seg.nii.gz => sub-vuiisIngenia03_space-other_T2star_label-GM_seg.nii.gz} (100%) diff --git a/derivatives/labels/sub-fslAchieva01/anat/sub-fslAchieva01_space-other_T2star_gmlabel-SC_seg.json b/derivatives/labels/sub-fslAchieva01/anat/sub-fslAchieva01_space-other_T2star_label-GM_seg.json similarity index 100% rename from derivatives/labels/sub-fslAchieva01/anat/sub-fslAchieva01_space-other_T2star_gmlabel-SC_seg.json rename to derivatives/labels/sub-fslAchieva01/anat/sub-fslAchieva01_space-other_T2star_label-GM_seg.json diff --git a/derivatives/labels/sub-fslAchieva01/anat/sub-fslAchieva01_space-other_T2star_gmlabel-SC_seg.nii.gz b/derivatives/labels/sub-fslAchieva01/anat/sub-fslAchieva01_space-other_T2star_label-GM_seg.nii.gz similarity index 100% rename from derivatives/labels/sub-fslAchieva01/anat/sub-fslAchieva01_space-other_T2star_gmlabel-SC_seg.nii.gz rename to derivatives/labels/sub-fslAchieva01/anat/sub-fslAchieva01_space-other_T2star_label-GM_seg.nii.gz diff --git a/derivatives/labels/sub-fslAchieva04/anat/sub-fslAchieva04_space-other_T2star_gmlabel-SC_seg.json b/derivatives/labels/sub-fslAchieva04/anat/sub-fslAchieva04_space-other_T2star_label-GM_seg.json similarity index 100% rename from derivatives/labels/sub-fslAchieva04/anat/sub-fslAchieva04_space-other_T2star_gmlabel-SC_seg.json rename to derivatives/labels/sub-fslAchieva04/anat/sub-fslAchieva04_space-other_T2star_label-GM_seg.json diff --git a/derivatives/labels/sub-fslAchieva04/anat/sub-fslAchieva04_space-other_T2star_gmlabel-SC_seg.nii.gz b/derivatives/labels/sub-fslAchieva04/anat/sub-fslAchieva04_space-other_T2star_label-GM_seg.nii.gz similarity index 100% rename from derivatives/labels/sub-fslAchieva04/anat/sub-fslAchieva04_space-other_T2star_gmlabel-SC_seg.nii.gz rename to derivatives/labels/sub-fslAchieva04/anat/sub-fslAchieva04_space-other_T2star_label-GM_seg.nii.gz diff --git a/derivatives/labels/sub-mniS05/anat/sub-mniS05_space-other_T2star_gmlabel-SC_seg.json b/derivatives/labels/sub-mniS05/anat/sub-mniS05_space-other_T2star_label-GM_seg.json similarity index 100% rename from derivatives/labels/sub-mniS05/anat/sub-mniS05_space-other_T2star_gmlabel-SC_seg.json rename to derivatives/labels/sub-mniS05/anat/sub-mniS05_space-other_T2star_label-GM_seg.json diff --git a/derivatives/labels/sub-mniS05/anat/sub-mniS05_space-other_T2star_gmlabel-SC_seg.nii.gz b/derivatives/labels/sub-mniS05/anat/sub-mniS05_space-other_T2star_label-GM_seg.nii.gz similarity index 100% rename from derivatives/labels/sub-mniS05/anat/sub-mniS05_space-other_T2star_gmlabel-SC_seg.nii.gz rename to derivatives/labels/sub-mniS05/anat/sub-mniS05_space-other_T2star_label-GM_seg.nii.gz diff --git a/derivatives/labels/sub-nottwil01/anat/sub-nottwil01_space-other_T2star_gmlabel-SC_seg.json b/derivatives/labels/sub-nottwil01/anat/sub-nottwil01_space-other_T2star_label-GM_seg.json similarity index 100% rename from derivatives/labels/sub-nottwil01/anat/sub-nottwil01_space-other_T2star_gmlabel-SC_seg.json rename to derivatives/labels/sub-nottwil01/anat/sub-nottwil01_space-other_T2star_label-GM_seg.json diff --git a/derivatives/labels/sub-nottwil01/anat/sub-nottwil01_space-other_T2star_gmlabel-SC_seg.nii.gz b/derivatives/labels/sub-nottwil01/anat/sub-nottwil01_space-other_T2star_label-GM_seg.nii.gz similarity index 100% rename from derivatives/labels/sub-nottwil01/anat/sub-nottwil01_space-other_T2star_gmlabel-SC_seg.nii.gz rename to derivatives/labels/sub-nottwil01/anat/sub-nottwil01_space-other_T2star_label-GM_seg.nii.gz diff --git a/derivatives/labels/sub-nottwil03/anat/sub-nottwil03_space-other_T2star_gmlabel-SC_seg.json b/derivatives/labels/sub-nottwil03/anat/sub-nottwil03_space-other_T2star_label-GM_seg.json similarity index 100% rename from derivatives/labels/sub-nottwil03/anat/sub-nottwil03_space-other_T2star_gmlabel-SC_seg.json rename to derivatives/labels/sub-nottwil03/anat/sub-nottwil03_space-other_T2star_label-GM_seg.json diff --git a/derivatives/labels/sub-nottwil03/anat/sub-nottwil03_space-other_T2star_gmlabel-SC_seg.nii.gz b/derivatives/labels/sub-nottwil03/anat/sub-nottwil03_space-other_T2star_label-GM_seg.nii.gz similarity index 100% rename from derivatives/labels/sub-nottwil03/anat/sub-nottwil03_space-other_T2star_gmlabel-SC_seg.nii.gz rename to derivatives/labels/sub-nottwil03/anat/sub-nottwil03_space-other_T2star_label-GM_seg.nii.gz diff --git a/derivatives/labels/sub-sherbrooke01/anat/sub-sherbrooke01_space-other_T2star_gmlabel-SC_seg.json b/derivatives/labels/sub-sherbrooke01/anat/sub-sherbrooke01_space-other_T2star_label-GM_seg.json similarity index 100% rename from derivatives/labels/sub-sherbrooke01/anat/sub-sherbrooke01_space-other_T2star_gmlabel-SC_seg.json rename to derivatives/labels/sub-sherbrooke01/anat/sub-sherbrooke01_space-other_T2star_label-GM_seg.json diff --git a/derivatives/labels/sub-sherbrooke01/anat/sub-sherbrooke01_space-other_T2star_gmlabel-SC_seg.nii.gz b/derivatives/labels/sub-sherbrooke01/anat/sub-sherbrooke01_space-other_T2star_label-GM_seg.nii.gz similarity index 100% rename from derivatives/labels/sub-sherbrooke01/anat/sub-sherbrooke01_space-other_T2star_gmlabel-SC_seg.nii.gz rename to derivatives/labels/sub-sherbrooke01/anat/sub-sherbrooke01_space-other_T2star_label-GM_seg.nii.gz diff --git a/derivatives/labels/sub-sherbrooke03/anat/sub-sherbrooke03_space-other_T2star_gmlabel-SC_seg.json b/derivatives/labels/sub-sherbrooke03/anat/sub-sherbrooke03_space-other_T2star_label-GM_seg.json similarity index 100% rename from derivatives/labels/sub-sherbrooke03/anat/sub-sherbrooke03_space-other_T2star_gmlabel-SC_seg.json rename to derivatives/labels/sub-sherbrooke03/anat/sub-sherbrooke03_space-other_T2star_label-GM_seg.json diff --git a/derivatives/labels/sub-sherbrooke03/anat/sub-sherbrooke03_space-other_T2star_gmlabel-SC_seg.nii.gz b/derivatives/labels/sub-sherbrooke03/anat/sub-sherbrooke03_space-other_T2star_label-GM_seg.nii.gz similarity index 100% rename from derivatives/labels/sub-sherbrooke03/anat/sub-sherbrooke03_space-other_T2star_gmlabel-SC_seg.nii.gz rename to derivatives/labels/sub-sherbrooke03/anat/sub-sherbrooke03_space-other_T2star_label-GM_seg.nii.gz diff --git a/derivatives/labels/sub-stanford06/anat/sub-stanford06_space-other_T2star_gmlabel-SC_seg.json b/derivatives/labels/sub-stanford06/anat/sub-stanford06_space-other_T2star_label-GM_seg.json similarity index 100% rename from derivatives/labels/sub-stanford06/anat/sub-stanford06_space-other_T2star_gmlabel-SC_seg.json rename to derivatives/labels/sub-stanford06/anat/sub-stanford06_space-other_T2star_label-GM_seg.json diff --git a/derivatives/labels/sub-stanford06/anat/sub-stanford06_space-other_T2star_gmlabel-SC_seg.nii.gz b/derivatives/labels/sub-stanford06/anat/sub-stanford06_space-other_T2star_label-GM_seg.nii.gz similarity index 100% rename from derivatives/labels/sub-stanford06/anat/sub-stanford06_space-other_T2star_gmlabel-SC_seg.nii.gz rename to derivatives/labels/sub-stanford06/anat/sub-stanford06_space-other_T2star_label-GM_seg.nii.gz diff --git a/derivatives/labels/sub-tokyo750w05/anat/sub-tokyo750w05_space-other_T2star_gmlabel-SC_seg.json b/derivatives/labels/sub-tokyo750w05/anat/sub-tokyo750w05_space-other_T2star_label-GM_seg.json similarity index 100% rename from derivatives/labels/sub-tokyo750w05/anat/sub-tokyo750w05_space-other_T2star_gmlabel-SC_seg.json rename to derivatives/labels/sub-tokyo750w05/anat/sub-tokyo750w05_space-other_T2star_label-GM_seg.json diff --git a/derivatives/labels/sub-tokyo750w05/anat/sub-tokyo750w05_space-other_T2star_gmlabel-SC_seg.nii.gz b/derivatives/labels/sub-tokyo750w05/anat/sub-tokyo750w05_space-other_T2star_label-GM_seg.nii.gz similarity index 100% rename from derivatives/labels/sub-tokyo750w05/anat/sub-tokyo750w05_space-other_T2star_gmlabel-SC_seg.nii.gz rename to derivatives/labels/sub-tokyo750w05/anat/sub-tokyo750w05_space-other_T2star_label-GM_seg.nii.gz diff --git a/derivatives/labels/sub-tokyo750w06/anat/sub-tokyo750w06_space-other_T2star_gmlabel-SC_seg.json b/derivatives/labels/sub-tokyo750w06/anat/sub-tokyo750w06_space-other_T2star_label-GM_seg.json similarity index 100% rename from derivatives/labels/sub-tokyo750w06/anat/sub-tokyo750w06_space-other_T2star_gmlabel-SC_seg.json rename to derivatives/labels/sub-tokyo750w06/anat/sub-tokyo750w06_space-other_T2star_label-GM_seg.json diff --git a/derivatives/labels/sub-tokyo750w06/anat/sub-tokyo750w06_space-other_T2star_gmlabel-SC_seg.nii.gz b/derivatives/labels/sub-tokyo750w06/anat/sub-tokyo750w06_space-other_T2star_label-GM_seg.nii.gz similarity index 100% rename from derivatives/labels/sub-tokyo750w06/anat/sub-tokyo750w06_space-other_T2star_gmlabel-SC_seg.nii.gz rename to derivatives/labels/sub-tokyo750w06/anat/sub-tokyo750w06_space-other_T2star_label-GM_seg.nii.gz diff --git a/derivatives/labels/sub-tokyoIngenia01/anat/sub-tokyoIngenia01_space-other_T2star_gmlabel-SC_seg.json b/derivatives/labels/sub-tokyoIngenia01/anat/sub-tokyoIngenia01_space-other_T2star_label-GM_seg.json similarity index 100% rename from derivatives/labels/sub-tokyoIngenia01/anat/sub-tokyoIngenia01_space-other_T2star_gmlabel-SC_seg.json rename to derivatives/labels/sub-tokyoIngenia01/anat/sub-tokyoIngenia01_space-other_T2star_label-GM_seg.json diff --git a/derivatives/labels/sub-tokyoIngenia01/anat/sub-tokyoIngenia01_space-other_T2star_gmlabel-SC_seg.nii.gz b/derivatives/labels/sub-tokyoIngenia01/anat/sub-tokyoIngenia01_space-other_T2star_label-GM_seg.nii.gz similarity index 100% rename from derivatives/labels/sub-tokyoIngenia01/anat/sub-tokyoIngenia01_space-other_T2star_gmlabel-SC_seg.nii.gz rename to derivatives/labels/sub-tokyoIngenia01/anat/sub-tokyoIngenia01_space-other_T2star_label-GM_seg.nii.gz diff --git a/derivatives/labels/sub-tokyoIngenia02/anat/sub-tokyoIngenia02_space-other_T2star_gmlabel-SC_seg.json b/derivatives/labels/sub-tokyoIngenia02/anat/sub-tokyoIngenia02_space-other_T2star_label-GM_seg.json similarity index 100% rename from derivatives/labels/sub-tokyoIngenia02/anat/sub-tokyoIngenia02_space-other_T2star_gmlabel-SC_seg.json rename to derivatives/labels/sub-tokyoIngenia02/anat/sub-tokyoIngenia02_space-other_T2star_label-GM_seg.json diff --git a/derivatives/labels/sub-tokyoIngenia02/anat/sub-tokyoIngenia02_space-other_T2star_gmlabel-SC_seg.nii.gz b/derivatives/labels/sub-tokyoIngenia02/anat/sub-tokyoIngenia02_space-other_T2star_label-GM_seg.nii.gz similarity index 100% rename from derivatives/labels/sub-tokyoIngenia02/anat/sub-tokyoIngenia02_space-other_T2star_gmlabel-SC_seg.nii.gz rename to derivatives/labels/sub-tokyoIngenia02/anat/sub-tokyoIngenia02_space-other_T2star_label-GM_seg.nii.gz diff --git a/derivatives/labels/sub-tokyoIngenia03/anat/sub-tokyoIngenia03_space-other_T2star_gmlabel-SC_seg.json b/derivatives/labels/sub-tokyoIngenia03/anat/sub-tokyoIngenia03_space-other_T2star_label-GM_seg.json similarity index 100% rename from derivatives/labels/sub-tokyoIngenia03/anat/sub-tokyoIngenia03_space-other_T2star_gmlabel-SC_seg.json rename to derivatives/labels/sub-tokyoIngenia03/anat/sub-tokyoIngenia03_space-other_T2star_label-GM_seg.json diff --git a/derivatives/labels/sub-tokyoIngenia03/anat/sub-tokyoIngenia03_space-other_T2star_gmlabel-SC_seg.nii.gz b/derivatives/labels/sub-tokyoIngenia03/anat/sub-tokyoIngenia03_space-other_T2star_label-GM_seg.nii.gz similarity index 100% rename from derivatives/labels/sub-tokyoIngenia03/anat/sub-tokyoIngenia03_space-other_T2star_gmlabel-SC_seg.nii.gz rename to derivatives/labels/sub-tokyoIngenia03/anat/sub-tokyoIngenia03_space-other_T2star_label-GM_seg.nii.gz diff --git a/derivatives/labels/sub-tokyoIngenia04/anat/sub-tokyoIngenia04_space-other_T2star_gmlabel-SC_seg.json b/derivatives/labels/sub-tokyoIngenia04/anat/sub-tokyoIngenia04_space-other_T2star_label-GM_seg.json similarity index 100% rename from derivatives/labels/sub-tokyoIngenia04/anat/sub-tokyoIngenia04_space-other_T2star_gmlabel-SC_seg.json rename to derivatives/labels/sub-tokyoIngenia04/anat/sub-tokyoIngenia04_space-other_T2star_label-GM_seg.json diff --git a/derivatives/labels/sub-tokyoIngenia04/anat/sub-tokyoIngenia04_space-other_T2star_gmlabel-SC_seg.nii.gz b/derivatives/labels/sub-tokyoIngenia04/anat/sub-tokyoIngenia04_space-other_T2star_label-GM_seg.nii.gz similarity index 100% rename from derivatives/labels/sub-tokyoIngenia04/anat/sub-tokyoIngenia04_space-other_T2star_gmlabel-SC_seg.nii.gz rename to derivatives/labels/sub-tokyoIngenia04/anat/sub-tokyoIngenia04_space-other_T2star_label-GM_seg.nii.gz diff --git a/derivatives/labels/sub-tokyoSkyra03/anat/sub-tokyoSkyra03_space-other_T2star_gmlabel-SC_seg.json b/derivatives/labels/sub-tokyoSkyra03/anat/sub-tokyoSkyra03_space-other_T2star_label-GM_seg.json similarity index 100% rename from derivatives/labels/sub-tokyoSkyra03/anat/sub-tokyoSkyra03_space-other_T2star_gmlabel-SC_seg.json rename to derivatives/labels/sub-tokyoSkyra03/anat/sub-tokyoSkyra03_space-other_T2star_label-GM_seg.json diff --git a/derivatives/labels/sub-tokyoSkyra03/anat/sub-tokyoSkyra03_space-other_T2star_gmlabel-SC_seg.nii.gz b/derivatives/labels/sub-tokyoSkyra03/anat/sub-tokyoSkyra03_space-other_T2star_label-GM_seg.nii.gz similarity index 100% rename from derivatives/labels/sub-tokyoSkyra03/anat/sub-tokyoSkyra03_space-other_T2star_gmlabel-SC_seg.nii.gz rename to derivatives/labels/sub-tokyoSkyra03/anat/sub-tokyoSkyra03_space-other_T2star_label-GM_seg.nii.gz diff --git a/derivatives/labels/sub-tokyoSkyra04/anat/sub-tokyoSkyra04_space-other_T2star_gmlabel-SC_seg.json b/derivatives/labels/sub-tokyoSkyra04/anat/sub-tokyoSkyra04_space-other_T2star_label-GM_seg.json similarity index 100% rename from derivatives/labels/sub-tokyoSkyra04/anat/sub-tokyoSkyra04_space-other_T2star_gmlabel-SC_seg.json rename to derivatives/labels/sub-tokyoSkyra04/anat/sub-tokyoSkyra04_space-other_T2star_label-GM_seg.json diff --git a/derivatives/labels/sub-tokyoSkyra04/anat/sub-tokyoSkyra04_space-other_T2star_gmlabel-SC_seg.nii.gz b/derivatives/labels/sub-tokyoSkyra04/anat/sub-tokyoSkyra04_space-other_T2star_label-GM_seg.nii.gz similarity index 100% rename from derivatives/labels/sub-tokyoSkyra04/anat/sub-tokyoSkyra04_space-other_T2star_gmlabel-SC_seg.nii.gz rename to derivatives/labels/sub-tokyoSkyra04/anat/sub-tokyoSkyra04_space-other_T2star_label-GM_seg.nii.gz diff --git a/derivatives/labels/sub-vuiisAchieva01/anat/sub-vuiisAchieva01_space-other_T2star_gmlabel-SC_seg.json b/derivatives/labels/sub-vuiisAchieva01/anat/sub-vuiisAchieva01_space-other_T2star_label-GM_seg.json similarity index 100% rename from derivatives/labels/sub-vuiisAchieva01/anat/sub-vuiisAchieva01_space-other_T2star_gmlabel-SC_seg.json rename to derivatives/labels/sub-vuiisAchieva01/anat/sub-vuiisAchieva01_space-other_T2star_label-GM_seg.json diff --git a/derivatives/labels/sub-vuiisAchieva01/anat/sub-vuiisAchieva01_space-other_T2star_gmlabel-SC_seg.nii.gz b/derivatives/labels/sub-vuiisAchieva01/anat/sub-vuiisAchieva01_space-other_T2star_label-GM_seg.nii.gz similarity index 100% rename from derivatives/labels/sub-vuiisAchieva01/anat/sub-vuiisAchieva01_space-other_T2star_gmlabel-SC_seg.nii.gz rename to derivatives/labels/sub-vuiisAchieva01/anat/sub-vuiisAchieva01_space-other_T2star_label-GM_seg.nii.gz diff --git a/derivatives/labels/sub-vuiisIngenia03/anat/sub-vuiisIngenia03_space-other_T2star_gmlabel-SC_seg.json b/derivatives/labels/sub-vuiisIngenia03/anat/sub-vuiisIngenia03_space-other_T2star_label-GM_seg.json similarity index 100% rename from derivatives/labels/sub-vuiisIngenia03/anat/sub-vuiisIngenia03_space-other_T2star_gmlabel-SC_seg.json rename to derivatives/labels/sub-vuiisIngenia03/anat/sub-vuiisIngenia03_space-other_T2star_label-GM_seg.json diff --git a/derivatives/labels/sub-vuiisIngenia03/anat/sub-vuiisIngenia03_space-other_T2star_gmlabel-SC_seg.nii.gz b/derivatives/labels/sub-vuiisIngenia03/anat/sub-vuiisIngenia03_space-other_T2star_label-GM_seg.nii.gz similarity index 100% rename from derivatives/labels/sub-vuiisIngenia03/anat/sub-vuiisIngenia03_space-other_T2star_gmlabel-SC_seg.nii.gz rename to derivatives/labels/sub-vuiisIngenia03/anat/sub-vuiisIngenia03_space-other_T2star_label-GM_seg.nii.gz From f3f7f76c1e68618dce7fc1364a90def1524be807 Mon Sep 17 00:00:00 2001 From: Sandrine Bedard Date: Tue, 20 Feb 2024 12:44:38 -0500 Subject: [PATCH 13/21] change C2 to C3 --- ...b-amu02_space-other_T1w_label-vertebrae_desc-C3C5_dlabel.json} | 0 ...amu02_space-other_T1w_label-vertebrae_desc-C3C5_dlabel.nii.gz} | 0 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...ebron07_space-other_T1w_label-vertebrae_desc-C3C5_dlabel.json} | 0 ...ron07_space-other_T1w_label-vertebrae_desc-C3C5_dlabel.nii.gz} | 0 ...genia05_space-other_T1w_label-vertebrae_desc-C3C5_dlabel.json} | 0 ...nia05_space-other_T1w_label-vertebrae_desc-C3C5_dlabel.nii.gz} | 0 62 files changed, 0 insertions(+), 0 deletions(-) rename derivatives/labels/sub-amu02/anat/{sub-amu02_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.json => sub-amu02_space-other_T1w_label-vertebrae_desc-C3C5_dlabel.json} (100%) rename derivatives/labels/sub-amu02/anat/{sub-amu02_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.nii.gz => sub-amu02_space-other_T1w_label-vertebrae_desc-C3C5_dlabel.nii.gz} (100%) rename derivatives/labels/sub-amu04/anat/{sub-amu04_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.json => sub-amu04_space-other_T1w_label-vertebrae_desc-C3C5_dlabel.json} (100%) rename derivatives/labels/sub-amu04/anat/{sub-amu04_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.nii.gz => sub-amu04_space-other_T1w_label-vertebrae_desc-C3C5_dlabel.nii.gz} (100%) rename derivatives/labels/sub-amu05/anat/{sub-amu05_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.json => sub-amu05_space-other_T1w_label-vertebrae_desc-C3C5_dlabel.json} (100%) rename derivatives/labels/sub-amu05/anat/{sub-amu05_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.nii.gz => sub-amu05_space-other_T1w_label-vertebrae_desc-C3C5_dlabel.nii.gz} (100%) rename derivatives/labels/sub-beijingVerio03/anat/{sub-beijingVerio03_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.json => sub-beijingVerio03_space-other_T1w_label-vertebrae_desc-C3C5_dlabel.json} (100%) rename derivatives/labels/sub-beijingVerio03/anat/{sub-beijingVerio03_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.nii.gz => sub-beijingVerio03_space-other_T1w_label-vertebrae_desc-C3C5_dlabel.nii.gz} (100%) rename derivatives/labels/sub-brnoUhb01/anat/{sub-brnoUhb01_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.json => sub-brnoUhb01_space-other_T1w_label-vertebrae_desc-C3C5_dlabel.json} (100%) rename derivatives/labels/sub-brnoUhb01/anat/{sub-brnoUhb01_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.nii.gz => sub-brnoUhb01_space-other_T1w_label-vertebrae_desc-C3C5_dlabel.nii.gz} (100%) rename derivatives/labels/sub-brnoUhb08/anat/{sub-brnoUhb08_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.json => sub-brnoUhb08_space-other_T1w_label-vertebrae_desc-C3C5_dlabel.json} (100%) rename derivatives/labels/sub-brnoUhb08/anat/{sub-brnoUhb08_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.nii.gz => sub-brnoUhb08_space-other_T1w_label-vertebrae_desc-C3C5_dlabel.nii.gz} (100%) rename derivatives/labels/sub-cardiff05/anat/{sub-cardiff05_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.json => sub-cardiff05_space-other_T1w_label-vertebrae_desc-C3C5_dlabel.json} (100%) rename derivatives/labels/sub-cardiff05/anat/{sub-cardiff05_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.nii.gz => sub-cardiff05_space-other_T1w_label-vertebrae_desc-C3C5_dlabel.nii.gz} (100%) rename derivatives/labels/sub-cmrra05/anat/{sub-cmrra05_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.json => sub-cmrra05_space-other_T1w_label-vertebrae_desc-C3C5_dlabel.json} (100%) rename derivatives/labels/sub-cmrra05/anat/{sub-cmrra05_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.nii.gz => sub-cmrra05_space-other_T1w_label-vertebrae_desc-C3C5_dlabel.nii.gz} (100%) rename derivatives/labels/sub-fslAchieva01/anat/{sub-fslAchieva01_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.json => sub-fslAchieva01_space-other_T1w_label-vertebrae_desc-C3C5_dlabel.json} (100%) rename derivatives/labels/sub-fslAchieva01/anat/{sub-fslAchieva01_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.nii.gz => sub-fslAchieva01_space-other_T1w_label-vertebrae_desc-C3C5_dlabel.nii.gz} (100%) rename derivatives/labels/sub-mgh01/anat/{sub-mgh01_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.json => sub-mgh01_space-other_T1w_label-vertebrae_desc-C3C5_dlabel.json} (100%) rename derivatives/labels/sub-mgh01/anat/{sub-mgh01_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.nii.gz => sub-mgh01_space-other_T1w_label-vertebrae_desc-C3C5_dlabel.nii.gz} (100%) rename derivatives/labels/sub-mgh02/anat/{sub-mgh02_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.json => sub-mgh02_space-other_T1w_label-vertebrae_desc-C3C5_dlabel.json} (100%) rename derivatives/labels/sub-mgh02/anat/{sub-mgh02_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.nii.gz => sub-mgh02_space-other_T1w_label-vertebrae_desc-C3C5_dlabel.nii.gz} (100%) rename derivatives/labels/sub-mgh05/anat/{sub-mgh05_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.json => sub-mgh05_space-other_T1w_label-vertebrae_desc-C3C5_dlabel.json} (100%) rename derivatives/labels/sub-mgh05/anat/{sub-mgh05_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.nii.gz => sub-mgh05_space-other_T1w_label-vertebrae_desc-C3C5_dlabel.nii.gz} (100%) rename derivatives/labels/sub-milan01/anat/{sub-milan01_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.json => sub-milan01_space-other_T1w_label-vertebrae_desc-C3C5_dlabel.json} (100%) rename derivatives/labels/sub-milan01/anat/{sub-milan01_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.nii.gz => sub-milan01_space-other_T1w_label-vertebrae_desc-C3C5_dlabel.nii.gz} (100%) rename derivatives/labels/sub-mniPilot1/anat/{sub-mniPilot1_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.json => sub-mniPilot1_space-other_T1w_label-vertebrae_desc-C3C5_dlabel.json} (100%) rename derivatives/labels/sub-mniPilot1/anat/{sub-mniPilot1_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.nii.gz => sub-mniPilot1_space-other_T1w_label-vertebrae_desc-C3C5_dlabel.nii.gz} (100%) rename derivatives/labels/sub-mpicbs01/anat/{sub-mpicbs01_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.json => sub-mpicbs01_space-other_T1w_label-vertebrae_desc-C3C5_dlabel.json} (100%) rename derivatives/labels/sub-mpicbs01/anat/{sub-mpicbs01_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.nii.gz => sub-mpicbs01_space-other_T1w_label-vertebrae_desc-C3C5_dlabel.nii.gz} (100%) rename derivatives/labels/sub-oxfordFmrib03/anat/{sub-oxfordFmrib03_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.json => sub-oxfordFmrib03_space-other_T1w_label-vertebrae_desc-C3C5_dlabel.json} (100%) rename derivatives/labels/sub-oxfordFmrib03/anat/{sub-oxfordFmrib03_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.nii.gz => sub-oxfordFmrib03_space-other_T1w_label-vertebrae_desc-C3C5_dlabel.nii.gz} (100%) rename derivatives/labels/sub-oxfordFmrib05/anat/{sub-oxfordFmrib05_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.json => sub-oxfordFmrib05_space-other_T1w_label-vertebrae_desc-C3C5_dlabel.json} (100%) rename derivatives/labels/sub-oxfordFmrib05/anat/{sub-oxfordFmrib05_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.nii.gz => sub-oxfordFmrib05_space-other_T1w_label-vertebrae_desc-C3C5_dlabel.nii.gz} (100%) rename derivatives/labels/sub-oxfordFmrib06/anat/{sub-oxfordFmrib06_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.json => sub-oxfordFmrib06_space-other_T1w_label-vertebrae_desc-C3C5_dlabel.json} (100%) rename derivatives/labels/sub-oxfordFmrib06/anat/{sub-oxfordFmrib06_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.nii.gz => sub-oxfordFmrib06_space-other_T1w_label-vertebrae_desc-C3C5_dlabel.nii.gz} (100%) rename derivatives/labels/sub-oxfordFmrib07/anat/{sub-oxfordFmrib07_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.json => sub-oxfordFmrib07_space-other_T1w_label-vertebrae_desc-C3C5_dlabel.json} (100%) rename derivatives/labels/sub-oxfordFmrib07/anat/{sub-oxfordFmrib07_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.nii.gz => sub-oxfordFmrib07_space-other_T1w_label-vertebrae_desc-C3C5_dlabel.nii.gz} (100%) rename derivatives/labels/sub-oxfordOhba05/anat/{sub-oxfordOhba05_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.json => sub-oxfordOhba05_space-other_T1w_label-vertebrae_desc-C3C5_dlabel.json} (100%) rename derivatives/labels/sub-oxfordOhba05/anat/{sub-oxfordOhba05_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.nii.gz => sub-oxfordOhba05_space-other_T1w_label-vertebrae_desc-C3C5_dlabel.nii.gz} (100%) rename derivatives/labels/sub-pavia03/anat/{sub-pavia03_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.json => sub-pavia03_space-other_T1w_label-vertebrae_desc-C3C5_dlabel.json} (100%) rename derivatives/labels/sub-pavia03/anat/{sub-pavia03_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.nii.gz => sub-pavia03_space-other_T1w_label-vertebrae_desc-C3C5_dlabel.nii.gz} (100%) rename derivatives/labels/sub-perform06/anat/{sub-perform06_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.json => sub-perform06_space-other_T1w_label-vertebrae_desc-C3C5_dlabel.json} (100%) rename derivatives/labels/sub-perform06/anat/{sub-perform06_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.nii.gz => sub-perform06_space-other_T1w_label-vertebrae_desc-C3C5_dlabel.nii.gz} (100%) rename derivatives/labels/sub-stanford03/anat/{sub-stanford03_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.json => sub-stanford03_space-other_T1w_label-vertebrae_desc-C3C5_dlabel.json} (100%) rename derivatives/labels/sub-stanford03/anat/{sub-stanford03_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.nii.gz => sub-stanford03_space-other_T1w_label-vertebrae_desc-C3C5_dlabel.nii.gz} (100%) rename derivatives/labels/sub-stanford06/anat/{sub-stanford06_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.json => sub-stanford06_space-other_T1w_label-vertebrae_desc-C3C5_dlabel.json} (100%) rename derivatives/labels/sub-stanford06/anat/{sub-stanford06_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.nii.gz => sub-stanford06_space-other_T1w_label-vertebrae_desc-C3C5_dlabel.nii.gz} (100%) rename derivatives/labels/sub-tehranS02/anat/{sub-tehranS02_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.json => sub-tehranS02_space-other_T1w_label-vertebrae_desc-C3C5_dlabel.json} (100%) rename derivatives/labels/sub-tehranS02/anat/{sub-tehranS02_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.nii.gz => sub-tehranS02_space-other_T1w_label-vertebrae_desc-C3C5_dlabel.nii.gz} (100%) rename derivatives/labels/sub-tehranS03/anat/{sub-tehranS03_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.json => sub-tehranS03_space-other_T1w_label-vertebrae_desc-C3C5_dlabel.json} (100%) rename derivatives/labels/sub-tehranS03/anat/{sub-tehranS03_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.nii.gz => sub-tehranS03_space-other_T1w_label-vertebrae_desc-C3C5_dlabel.nii.gz} (100%) rename derivatives/labels/sub-tokyoIngenia03/anat/{sub-tokyoIngenia03_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.json => sub-tokyoIngenia03_space-other_T1w_label-vertebrae_desc-C3C5_dlabel.json} (100%) rename derivatives/labels/sub-tokyoIngenia03/anat/{sub-tokyoIngenia03_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.nii.gz => sub-tokyoIngenia03_space-other_T1w_label-vertebrae_desc-C3C5_dlabel.nii.gz} (100%) rename derivatives/labels/sub-tokyoSkyra03/anat/{sub-tokyoSkyra03_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.json => sub-tokyoSkyra03_space-other_T1w_label-vertebrae_desc-C3C5_dlabel.json} (100%) rename derivatives/labels/sub-tokyoSkyra03/anat/{sub-tokyoSkyra03_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.nii.gz => sub-tokyoSkyra03_space-other_T1w_label-vertebrae_desc-C3C5_dlabel.nii.gz} (100%) rename derivatives/labels/sub-vallHebron03/anat/{sub-vallHebron03_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.json => sub-vallHebron03_space-other_T1w_label-vertebrae_desc-C3C5_dlabel.json} (100%) rename derivatives/labels/sub-vallHebron03/anat/{sub-vallHebron03_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.nii.gz => sub-vallHebron03_space-other_T1w_label-vertebrae_desc-C3C5_dlabel.nii.gz} (100%) rename derivatives/labels/sub-vallHebron07/anat/{sub-vallHebron07_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.json => sub-vallHebron07_space-other_T1w_label-vertebrae_desc-C3C5_dlabel.json} (100%) rename derivatives/labels/sub-vallHebron07/anat/{sub-vallHebron07_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.nii.gz => sub-vallHebron07_space-other_T1w_label-vertebrae_desc-C3C5_dlabel.nii.gz} (100%) rename derivatives/labels/sub-vuiisIngenia05/anat/{sub-vuiisIngenia05_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.json => sub-vuiisIngenia05_space-other_T1w_label-vertebrae_desc-C3C5_dlabel.json} (100%) rename derivatives/labels/sub-vuiisIngenia05/anat/{sub-vuiisIngenia05_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.nii.gz => sub-vuiisIngenia05_space-other_T1w_label-vertebrae_desc-C3C5_dlabel.nii.gz} (100%) diff --git a/derivatives/labels/sub-amu02/anat/sub-amu02_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.json b/derivatives/labels/sub-amu02/anat/sub-amu02_space-other_T1w_label-vertebrae_desc-C3C5_dlabel.json similarity index 100% rename from derivatives/labels/sub-amu02/anat/sub-amu02_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.json rename to derivatives/labels/sub-amu02/anat/sub-amu02_space-other_T1w_label-vertebrae_desc-C3C5_dlabel.json diff --git a/derivatives/labels/sub-amu02/anat/sub-amu02_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.nii.gz b/derivatives/labels/sub-amu02/anat/sub-amu02_space-other_T1w_label-vertebrae_desc-C3C5_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-amu02/anat/sub-amu02_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.nii.gz rename to derivatives/labels/sub-amu02/anat/sub-amu02_space-other_T1w_label-vertebrae_desc-C3C5_dlabel.nii.gz diff --git a/derivatives/labels/sub-amu04/anat/sub-amu04_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.json b/derivatives/labels/sub-amu04/anat/sub-amu04_space-other_T1w_label-vertebrae_desc-C3C5_dlabel.json similarity index 100% rename from derivatives/labels/sub-amu04/anat/sub-amu04_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.json rename to derivatives/labels/sub-amu04/anat/sub-amu04_space-other_T1w_label-vertebrae_desc-C3C5_dlabel.json diff --git a/derivatives/labels/sub-amu04/anat/sub-amu04_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.nii.gz b/derivatives/labels/sub-amu04/anat/sub-amu04_space-other_T1w_label-vertebrae_desc-C3C5_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-amu04/anat/sub-amu04_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.nii.gz rename to derivatives/labels/sub-amu04/anat/sub-amu04_space-other_T1w_label-vertebrae_desc-C3C5_dlabel.nii.gz diff --git a/derivatives/labels/sub-amu05/anat/sub-amu05_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.json b/derivatives/labels/sub-amu05/anat/sub-amu05_space-other_T1w_label-vertebrae_desc-C3C5_dlabel.json similarity index 100% rename from derivatives/labels/sub-amu05/anat/sub-amu05_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.json rename to derivatives/labels/sub-amu05/anat/sub-amu05_space-other_T1w_label-vertebrae_desc-C3C5_dlabel.json diff --git a/derivatives/labels/sub-amu05/anat/sub-amu05_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.nii.gz b/derivatives/labels/sub-amu05/anat/sub-amu05_space-other_T1w_label-vertebrae_desc-C3C5_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-amu05/anat/sub-amu05_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.nii.gz rename to derivatives/labels/sub-amu05/anat/sub-amu05_space-other_T1w_label-vertebrae_desc-C3C5_dlabel.nii.gz diff --git a/derivatives/labels/sub-beijingVerio03/anat/sub-beijingVerio03_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.json b/derivatives/labels/sub-beijingVerio03/anat/sub-beijingVerio03_space-other_T1w_label-vertebrae_desc-C3C5_dlabel.json similarity index 100% rename from derivatives/labels/sub-beijingVerio03/anat/sub-beijingVerio03_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.json rename to derivatives/labels/sub-beijingVerio03/anat/sub-beijingVerio03_space-other_T1w_label-vertebrae_desc-C3C5_dlabel.json diff --git a/derivatives/labels/sub-beijingVerio03/anat/sub-beijingVerio03_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.nii.gz b/derivatives/labels/sub-beijingVerio03/anat/sub-beijingVerio03_space-other_T1w_label-vertebrae_desc-C3C5_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-beijingVerio03/anat/sub-beijingVerio03_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.nii.gz rename to derivatives/labels/sub-beijingVerio03/anat/sub-beijingVerio03_space-other_T1w_label-vertebrae_desc-C3C5_dlabel.nii.gz diff --git a/derivatives/labels/sub-brnoUhb01/anat/sub-brnoUhb01_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.json b/derivatives/labels/sub-brnoUhb01/anat/sub-brnoUhb01_space-other_T1w_label-vertebrae_desc-C3C5_dlabel.json similarity index 100% rename from derivatives/labels/sub-brnoUhb01/anat/sub-brnoUhb01_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.json rename to derivatives/labels/sub-brnoUhb01/anat/sub-brnoUhb01_space-other_T1w_label-vertebrae_desc-C3C5_dlabel.json diff --git a/derivatives/labels/sub-brnoUhb01/anat/sub-brnoUhb01_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.nii.gz b/derivatives/labels/sub-brnoUhb01/anat/sub-brnoUhb01_space-other_T1w_label-vertebrae_desc-C3C5_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-brnoUhb01/anat/sub-brnoUhb01_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.nii.gz rename to derivatives/labels/sub-brnoUhb01/anat/sub-brnoUhb01_space-other_T1w_label-vertebrae_desc-C3C5_dlabel.nii.gz diff --git a/derivatives/labels/sub-brnoUhb08/anat/sub-brnoUhb08_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.json b/derivatives/labels/sub-brnoUhb08/anat/sub-brnoUhb08_space-other_T1w_label-vertebrae_desc-C3C5_dlabel.json similarity index 100% rename from derivatives/labels/sub-brnoUhb08/anat/sub-brnoUhb08_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.json rename to derivatives/labels/sub-brnoUhb08/anat/sub-brnoUhb08_space-other_T1w_label-vertebrae_desc-C3C5_dlabel.json diff --git a/derivatives/labels/sub-brnoUhb08/anat/sub-brnoUhb08_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.nii.gz b/derivatives/labels/sub-brnoUhb08/anat/sub-brnoUhb08_space-other_T1w_label-vertebrae_desc-C3C5_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-brnoUhb08/anat/sub-brnoUhb08_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.nii.gz rename to 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derivatives/labels/sub-tehranS03/anat/sub-tehranS03_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.json rename to derivatives/labels/sub-tehranS03/anat/sub-tehranS03_space-other_T1w_label-vertebrae_desc-C3C5_dlabel.json diff --git a/derivatives/labels/sub-tehranS03/anat/sub-tehranS03_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.nii.gz b/derivatives/labels/sub-tehranS03/anat/sub-tehranS03_space-other_T1w_label-vertebrae_desc-C3C5_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-tehranS03/anat/sub-tehranS03_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.nii.gz rename to derivatives/labels/sub-tehranS03/anat/sub-tehranS03_space-other_T1w_label-vertebrae_desc-C3C5_dlabel.nii.gz diff --git a/derivatives/labels/sub-tokyoIngenia03/anat/sub-tokyoIngenia03_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.json b/derivatives/labels/sub-tokyoIngenia03/anat/sub-tokyoIngenia03_space-other_T1w_label-vertebrae_desc-C3C5_dlabel.json similarity index 100% rename from derivatives/labels/sub-tokyoIngenia03/anat/sub-tokyoIngenia03_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.json rename to derivatives/labels/sub-tokyoIngenia03/anat/sub-tokyoIngenia03_space-other_T1w_label-vertebrae_desc-C3C5_dlabel.json diff --git a/derivatives/labels/sub-tokyoIngenia03/anat/sub-tokyoIngenia03_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.nii.gz b/derivatives/labels/sub-tokyoIngenia03/anat/sub-tokyoIngenia03_space-other_T1w_label-vertebrae_desc-C3C5_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-tokyoIngenia03/anat/sub-tokyoIngenia03_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.nii.gz rename to derivatives/labels/sub-tokyoIngenia03/anat/sub-tokyoIngenia03_space-other_T1w_label-vertebrae_desc-C3C5_dlabel.nii.gz diff --git a/derivatives/labels/sub-tokyoSkyra03/anat/sub-tokyoSkyra03_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.json b/derivatives/labels/sub-tokyoSkyra03/anat/sub-tokyoSkyra03_space-other_T1w_label-vertebrae_desc-C3C5_dlabel.json similarity index 100% rename from derivatives/labels/sub-tokyoSkyra03/anat/sub-tokyoSkyra03_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.json rename to derivatives/labels/sub-tokyoSkyra03/anat/sub-tokyoSkyra03_space-other_T1w_label-vertebrae_desc-C3C5_dlabel.json diff --git a/derivatives/labels/sub-tokyoSkyra03/anat/sub-tokyoSkyra03_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.nii.gz b/derivatives/labels/sub-tokyoSkyra03/anat/sub-tokyoSkyra03_space-other_T1w_label-vertebrae_desc-C3C5_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-tokyoSkyra03/anat/sub-tokyoSkyra03_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.nii.gz rename to derivatives/labels/sub-tokyoSkyra03/anat/sub-tokyoSkyra03_space-other_T1w_label-vertebrae_desc-C3C5_dlabel.nii.gz diff --git a/derivatives/labels/sub-vallHebron03/anat/sub-vallHebron03_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.json b/derivatives/labels/sub-vallHebron03/anat/sub-vallHebron03_space-other_T1w_label-vertebrae_desc-C3C5_dlabel.json similarity index 100% rename from derivatives/labels/sub-vallHebron03/anat/sub-vallHebron03_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.json rename to derivatives/labels/sub-vallHebron03/anat/sub-vallHebron03_space-other_T1w_label-vertebrae_desc-C3C5_dlabel.json diff --git a/derivatives/labels/sub-vallHebron03/anat/sub-vallHebron03_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.nii.gz b/derivatives/labels/sub-vallHebron03/anat/sub-vallHebron03_space-other_T1w_label-vertebrae_desc-C3C5_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-vallHebron03/anat/sub-vallHebron03_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.nii.gz rename to derivatives/labels/sub-vallHebron03/anat/sub-vallHebron03_space-other_T1w_label-vertebrae_desc-C3C5_dlabel.nii.gz diff --git a/derivatives/labels/sub-vallHebron07/anat/sub-vallHebron07_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.json b/derivatives/labels/sub-vallHebron07/anat/sub-vallHebron07_space-other_T1w_label-vertebrae_desc-C3C5_dlabel.json similarity index 100% rename from derivatives/labels/sub-vallHebron07/anat/sub-vallHebron07_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.json rename to derivatives/labels/sub-vallHebron07/anat/sub-vallHebron07_space-other_T1w_label-vertebrae_desc-C3C5_dlabel.json diff --git a/derivatives/labels/sub-vallHebron07/anat/sub-vallHebron07_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.nii.gz b/derivatives/labels/sub-vallHebron07/anat/sub-vallHebron07_space-other_T1w_label-vertebrae_desc-C3C5_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-vallHebron07/anat/sub-vallHebron07_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.nii.gz rename to derivatives/labels/sub-vallHebron07/anat/sub-vallHebron07_space-other_T1w_label-vertebrae_desc-C3C5_dlabel.nii.gz diff --git a/derivatives/labels/sub-vuiisIngenia05/anat/sub-vuiisIngenia05_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.json b/derivatives/labels/sub-vuiisIngenia05/anat/sub-vuiisIngenia05_space-other_T1w_label-vertebrae_desc-C3C5_dlabel.json similarity index 100% rename from derivatives/labels/sub-vuiisIngenia05/anat/sub-vuiisIngenia05_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.json rename to derivatives/labels/sub-vuiisIngenia05/anat/sub-vuiisIngenia05_space-other_T1w_label-vertebrae_desc-C3C5_dlabel.json diff --git a/derivatives/labels/sub-vuiisIngenia05/anat/sub-vuiisIngenia05_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.nii.gz b/derivatives/labels/sub-vuiisIngenia05/anat/sub-vuiisIngenia05_space-other_T1w_label-vertebrae_desc-C3C5_dlabel.nii.gz similarity index 100% rename from derivatives/labels/sub-vuiisIngenia05/anat/sub-vuiisIngenia05_space-other_T1w_label-vertebrae_desc-C2C5_dlabel.nii.gz rename to derivatives/labels/sub-vuiisIngenia05/anat/sub-vuiisIngenia05_space-other_T1w_label-vertebrae_desc-C3C5_dlabel.nii.gz From e230463fa047f87eda8a7231cc72131cfd15b31c Mon Sep 17 00:00:00 2001 From: Sandrine Bedard Date: Mon, 4 Mar 2024 15:27:37 -0500 Subject: [PATCH 14/21] fix wrong qform and sform --- .../anat/sub-brnoUhb02_space-other_T1w_label-SC_seg.nii.gz | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/derivatives/labels/sub-brnoUhb02/anat/sub-brnoUhb02_space-other_T1w_label-SC_seg.nii.gz b/derivatives/labels/sub-brnoUhb02/anat/sub-brnoUhb02_space-other_T1w_label-SC_seg.nii.gz index befe17b665..1c7bf00d33 100644 --- a/derivatives/labels/sub-brnoUhb02/anat/sub-brnoUhb02_space-other_T1w_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-brnoUhb02/anat/sub-brnoUhb02_space-other_T1w_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s40755--be19086fd0fdd5ddd0d546dd231930b3695ec38522bab9db69802bac3966228e.nii.gz +/annex/objects/SHA256E-s175383--40d10fa0d5b7b070afc68e019e3923c78a7bf2bdc17476cbf7a7ef81528202ca.nii.gz From 6e483ee4c2e205e98a8dc8583b7ff6d784c187e3 Mon Sep 17 00:00:00 2001 From: Sandrine Bedard Date: Thu, 7 Mar 2024 11:41:20 -0500 Subject: [PATCH 15/21] fix qform and sform --- .../sub-beijingPrisma02_space-other_T1w_label-SC_seg.nii.gz | 2 +- .../anat/sub-brnoUhb07_space-other_T1w_label-SC_seg.nii.gz | 2 +- .../anat/sub-brnoUhb08_space-other_T1w_label-SC_seg.nii.gz | 2 +- .../anat/sub-oxfordOhba05_space-other_T1w_label-SC_seg.nii.gz | 2 +- .../anat/sub-ucdavis03_space-other_T1w_label-SC_seg.nii.gz | 2 +- 5 files changed, 5 insertions(+), 5 deletions(-) diff --git a/derivatives/labels/sub-beijingPrisma02/anat/sub-beijingPrisma02_space-other_T1w_label-SC_seg.nii.gz b/derivatives/labels/sub-beijingPrisma02/anat/sub-beijingPrisma02_space-other_T1w_label-SC_seg.nii.gz index 90ffd67fa1..53f029a30e 100644 --- a/derivatives/labels/sub-beijingPrisma02/anat/sub-beijingPrisma02_space-other_T1w_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-beijingPrisma02/anat/sub-beijingPrisma02_space-other_T1w_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s34674--436eba06c3f034115d9450ab05df14413e080417b84be0e3f257a6f1895730ec.nii.gz +/annex/objects/SHA256E-s146927--fc68ed245d231803c5a048dd210a0bd6e9cb786d1d85704f9d674937354ca5b2.nii.gz diff --git a/derivatives/labels/sub-brnoUhb07/anat/sub-brnoUhb07_space-other_T1w_label-SC_seg.nii.gz b/derivatives/labels/sub-brnoUhb07/anat/sub-brnoUhb07_space-other_T1w_label-SC_seg.nii.gz index b76ee2996a..440c6fc687 100644 --- a/derivatives/labels/sub-brnoUhb07/anat/sub-brnoUhb07_space-other_T1w_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-brnoUhb07/anat/sub-brnoUhb07_space-other_T1w_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s40551--086c00d83a2ee1a224d4e0f652ecbd35d06d1060530a92599999ebe721cd6180.nii.gz +/annex/objects/SHA256E-s174658--2f7a39feaea36ceebc8175fbc03754cbba83850c094f51d3764436fcba5a0b52.nii.gz diff --git a/derivatives/labels/sub-brnoUhb08/anat/sub-brnoUhb08_space-other_T1w_label-SC_seg.nii.gz b/derivatives/labels/sub-brnoUhb08/anat/sub-brnoUhb08_space-other_T1w_label-SC_seg.nii.gz index 9b27884015..0ab38820bb 100644 --- a/derivatives/labels/sub-brnoUhb08/anat/sub-brnoUhb08_space-other_T1w_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-brnoUhb08/anat/sub-brnoUhb08_space-other_T1w_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s40584--4dec0fa0c3ca5069ce6bc1d3abff2e6a401d87df2f280462de45396251157e6f.nii.gz +/annex/objects/SHA256E-s175213--0f5a19b38048a42c456b9dbb1aae37287076c3f54a5c9143c3f005e0d6845a00.nii.gz diff --git a/derivatives/labels/sub-oxfordOhba05/anat/sub-oxfordOhba05_space-other_T1w_label-SC_seg.nii.gz b/derivatives/labels/sub-oxfordOhba05/anat/sub-oxfordOhba05_space-other_T1w_label-SC_seg.nii.gz index ae415b063f..485cc59011 100644 --- a/derivatives/labels/sub-oxfordOhba05/anat/sub-oxfordOhba05_space-other_T1w_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-oxfordOhba05/anat/sub-oxfordOhba05_space-other_T1w_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s34575--c5f6886f42030a59743b47b7d9d0c7d4bac05f1fdc909c4b10573ad99cc0ab32.nii.gz +/annex/objects/SHA256E-s147292--3e03ad19d303702027ddaf59f546d8b6a876e410c3ef5fabf4ce9c4abc3e75d1.nii.gz diff --git a/derivatives/labels/sub-ucdavis03/anat/sub-ucdavis03_space-other_T1w_label-SC_seg.nii.gz b/derivatives/labels/sub-ucdavis03/anat/sub-ucdavis03_space-other_T1w_label-SC_seg.nii.gz index 543899dccd..e699b36c38 100644 --- a/derivatives/labels/sub-ucdavis03/anat/sub-ucdavis03_space-other_T1w_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-ucdavis03/anat/sub-ucdavis03_space-other_T1w_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s34729--872d073cbd049870d63343e9be01de9bed1efc8d1371b622e902203cb393a8a4.nii.gz +/annex/objects/SHA256E-s147656--1152e6ca47b2e65f066d76f8c5ea4a202315e83586c9ecdb4ecba5a7d426c5e3.nii.gz From 0aaf1aa0aec76000087a453e2774a1e9d6eee5d7 Mon Sep 17 00:00:00 2001 From: Sandrine Bedard Date: Thu, 7 Mar 2024 16:08:47 -0500 Subject: [PATCH 16/21] redo discs and fix orientation to seg --- .../sub-beijingPrisma02_space-other_T1w_label-SC_seg.nii.gz | 2 +- .../anat/sub-oxfordOhba05_T1w_label-discs_dlabel.json | 4 ++-- .../anat/sub-oxfordOhba05_T1w_label-discs_dlabel.nii.gz | 2 +- 3 files changed, 4 insertions(+), 4 deletions(-) diff --git a/derivatives/labels/sub-beijingPrisma02/anat/sub-beijingPrisma02_space-other_T1w_label-SC_seg.nii.gz b/derivatives/labels/sub-beijingPrisma02/anat/sub-beijingPrisma02_space-other_T1w_label-SC_seg.nii.gz index 53f029a30e..cc66b4b477 100644 --- a/derivatives/labels/sub-beijingPrisma02/anat/sub-beijingPrisma02_space-other_T1w_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-beijingPrisma02/anat/sub-beijingPrisma02_space-other_T1w_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s146927--fc68ed245d231803c5a048dd210a0bd6e9cb786d1d85704f9d674937354ca5b2.nii.gz +/annex/objects/SHA256E-s287790--6e1189b98277df7135729c1f370152882d830bce2c405b4af2a64868bcec9bb3.nii.gz diff --git a/derivatives/labels/sub-oxfordOhba05/anat/sub-oxfordOhba05_T1w_label-discs_dlabel.json b/derivatives/labels/sub-oxfordOhba05/anat/sub-oxfordOhba05_T1w_label-discs_dlabel.json index d7948b8771..f3ae872141 100644 --- a/derivatives/labels/sub-oxfordOhba05/anat/sub-oxfordOhba05_T1w_label-discs_dlabel.json +++ b/derivatives/labels/sub-oxfordOhba05/anat/sub-oxfordOhba05_T1w_label-discs_dlabel.json @@ -1,4 +1,4 @@ { - "Author": "Nathan Molinier", - "Date": "2023-05-16 15:58:48" + "Author": "Sandrine Bedard", + "Date": "2024-03-07 16:07:48" } diff --git a/derivatives/labels/sub-oxfordOhba05/anat/sub-oxfordOhba05_T1w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-oxfordOhba05/anat/sub-oxfordOhba05_T1w_label-discs_dlabel.nii.gz index 0cb488a5bc..0677bbc15b 100644 --- a/derivatives/labels/sub-oxfordOhba05/anat/sub-oxfordOhba05_T1w_label-discs_dlabel.nii.gz +++ b/derivatives/labels/sub-oxfordOhba05/anat/sub-oxfordOhba05_T1w_label-discs_dlabel.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s70000--6f832ac6950cd70e49f1dee78e6fc24e5adcfe61e89ab095e8ff8c1e2440c062.nii.gz +/annex/objects/SHA256E-s69997--bcbf029d686990216537713392ea71687e17667d3b3477ad01625b792b03cccb.nii.gz From d9ee17627c5b9349ec64787be2e2a1b09d8eac25 Mon Sep 17 00:00:00 2001 From: Sandrine Bedard Date: Thu, 7 Mar 2024 17:06:13 -0500 Subject: [PATCH 17/21] fix disc label --- .../anat/sub-beijingPrisma02_T1w_label-discs_dlabel.json | 4 ++-- .../anat/sub-beijingPrisma02_T1w_label-discs_dlabel.nii.gz | 2 +- 2 files changed, 3 insertions(+), 3 deletions(-) diff --git a/derivatives/labels/sub-beijingPrisma02/anat/sub-beijingPrisma02_T1w_label-discs_dlabel.json b/derivatives/labels/sub-beijingPrisma02/anat/sub-beijingPrisma02_T1w_label-discs_dlabel.json index 8c0b899d68..65926562c1 100644 --- a/derivatives/labels/sub-beijingPrisma02/anat/sub-beijingPrisma02_T1w_label-discs_dlabel.json +++ b/derivatives/labels/sub-beijingPrisma02/anat/sub-beijingPrisma02_T1w_label-discs_dlabel.json @@ -1,4 +1,4 @@ { - "Author": "Nathan Molinier", - "Date": "2023-05-16 14:23:18" + "Author": "Sandrine Bedard", + "Date": "2024-03-07 17:05:18" } diff --git a/derivatives/labels/sub-beijingPrisma02/anat/sub-beijingPrisma02_T1w_label-discs_dlabel.nii.gz b/derivatives/labels/sub-beijingPrisma02/anat/sub-beijingPrisma02_T1w_label-discs_dlabel.nii.gz index 169ce967c3..3fd3f1d53f 100644 --- a/derivatives/labels/sub-beijingPrisma02/anat/sub-beijingPrisma02_T1w_label-discs_dlabel.nii.gz +++ b/derivatives/labels/sub-beijingPrisma02/anat/sub-beijingPrisma02_T1w_label-discs_dlabel.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s69989--8175b018ba2fe171b6ae7cc31671ae61747bf520a060fe2f9a005a134540c8fe.nii.gz +/annex/objects/SHA256E-s69996--0080756e1cf06d8a03d7c5ddecea2461f53e4ea1dc5e7436cd22b975cd9019c7.nii.gz From e251f5114c116ff4ac408d8b93d1764482b4dadc Mon Sep 17 00:00:00 2001 From: Sandrine Bedard Date: Wed, 20 Mar 2024 15:16:53 -0400 Subject: [PATCH 18/21] set sform as qform --- ...lip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz | 2 +- ...ip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz | 2 +- ...lip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz | 2 +- ...ip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz | 2 +- ...lip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz | 2 +- ...ip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz | 2 +- ...lip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz | 2 +- 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...ip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz | 2 +- ...lip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz | 2 +- ...ip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz | 2 +- ...lip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz | 2 +- ...ip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz | 2 +- ...lip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz | 2 +- ...ip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz | 2 +- ...lip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz | 2 +- ...ip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz | 2 +- ...lip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz | 2 +- ...ip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz | 2 +- ...lip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz | 2 +- ...ip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz | 2 +- ...lip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz | 2 +- ...ip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz | 2 +- ...lip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz | 2 +- ...ip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz | 2 +- ...lip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz | 2 +- ...ip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz | 2 +- ...lip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz | 2 +- ...ip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz | 2 +- ...lip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz | 2 +- ...ip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz | 2 +- ...lip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz | 2 +- ...ip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz | 2 +- ...lip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz | 2 +- ...ip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz | 2 +- ...lip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz | 2 +- ...ip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz | 2 +- ...lip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz | 2 +- ...ip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz | 2 +- ...lip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz | 2 +- ...ip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz | 2 +- ...lip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz | 2 +- ...ip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz | 2 +- ...lip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz | 2 +- ...ip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz | 2 +- ...lip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz | 2 +- ...ip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz | 2 +- ...lip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz | 2 +- ...ip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz | 2 +- ...lip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz | 2 +- ...ip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz | 2 +- ...lip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz | 2 +- ...ip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz | 2 +- ...lip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz | 2 +- ...ip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz | 2 +- ...lip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz | 2 +- ...ip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz | 2 +- ...lip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz | 2 +- ...ip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz | 2 +- ...lip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz | 2 +- ...ip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz | 2 +- ...lip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz | 2 +- ...ip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz | 2 +- ...lip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz | 2 +- ...ip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz | 2 +- ...lip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz | 2 +- ...ip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz | 2 +- 486 files changed, 486 insertions(+), 486 deletions(-) diff --git a/derivatives/labels_softseg_bin/sub-amu01/anat/sub-amu01_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz b/derivatives/labels_softseg_bin/sub-amu01/anat/sub-amu01_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz index 7250649bff..2ed0554140 100644 --- a/derivatives/labels_softseg_bin/sub-amu01/anat/sub-amu01_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz +++ b/derivatives/labels_softseg_bin/sub-amu01/anat/sub-amu01_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s7330--e95671de94405e0e9cafd2c3a1922ecea30145a7998da375db28d7d76ca0e9e7.nii.gz +/annex/objects/SHA256E-s7354--c441401a4eb2afd213a7a4f9cbb0afb057daab3d697517f090cbd884fb67b520.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-amu01/anat/sub-amu01_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz b/derivatives/labels_softseg_bin/sub-amu01/anat/sub-amu01_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz index 1c0e146123..3e26de0afc 100644 --- a/derivatives/labels_softseg_bin/sub-amu01/anat/sub-amu01_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz +++ b/derivatives/labels_softseg_bin/sub-amu01/anat/sub-amu01_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s7293--6ef253081fcd698c9ed7eee91f8c3638f3457835996300d5722793d904505758.nii.gz +/annex/objects/SHA256E-s7318--3d0e8fdb13559d3fd7ea9b42ee71b37db5b4fde2ca976c30c720741312e1979d.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-amu02/anat/sub-amu02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz b/derivatives/labels_softseg_bin/sub-amu02/anat/sub-amu02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz index d18b4f9399..d21ef31145 100644 --- a/derivatives/labels_softseg_bin/sub-amu02/anat/sub-amu02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz +++ b/derivatives/labels_softseg_bin/sub-amu02/anat/sub-amu02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s7301--1fca0c9e00179e1380996d7074ba57bee43f13fe3c8610c8a6273599a89f308f.nii.gz +/annex/objects/SHA256E-s7333--127002b9ed553982fb948031519ea1ed72eab28054822aa4f851dcc678727f64.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-amu02/anat/sub-amu02_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz b/derivatives/labels_softseg_bin/sub-amu02/anat/sub-amu02_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz index d541bb69f1..808f08564a 100644 --- a/derivatives/labels_softseg_bin/sub-amu02/anat/sub-amu02_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz +++ b/derivatives/labels_softseg_bin/sub-amu02/anat/sub-amu02_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s7120--bb0a712c8a52945da2fc2a0aa4da1c9d6b5536503a271d88f99369ee005eb7eb.nii.gz +/annex/objects/SHA256E-s7151--11d8e29e1e81d02539a364e3d3c7084a9f9752d37fd6720acb824b32b4377d15.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-amu03/anat/sub-amu03_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz b/derivatives/labels_softseg_bin/sub-amu03/anat/sub-amu03_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz index 1a8bab880b..e19e85dbb0 100644 --- a/derivatives/labels_softseg_bin/sub-amu03/anat/sub-amu03_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz +++ b/derivatives/labels_softseg_bin/sub-amu03/anat/sub-amu03_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s7247--0857224a71fb7865dd5adb6c80c2adccf75468f83ebb66791a21173b6044bf85.nii.gz +/annex/objects/SHA256E-s7272--163072c56e56825bc109726b9586560c1173d81baaf3240880354a865d86a9b5.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-amu03/anat/sub-amu03_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz b/derivatives/labels_softseg_bin/sub-amu03/anat/sub-amu03_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz index ac69d14465..816d3d0b18 100644 --- a/derivatives/labels_softseg_bin/sub-amu03/anat/sub-amu03_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz +++ b/derivatives/labels_softseg_bin/sub-amu03/anat/sub-amu03_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s7219--7d430d63762a0ba23b87fafdcb5a8b9958f3b94981a81458c32904972e872982.nii.gz +/annex/objects/SHA256E-s7244--89e07ddf55c18b982d174dd653f3829fb3e379db9658a81575c4afee376a6a91.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-amu04/anat/sub-amu04_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz b/derivatives/labels_softseg_bin/sub-amu04/anat/sub-amu04_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz index 7f52113ce6..7241dcede6 100644 --- a/derivatives/labels_softseg_bin/sub-amu04/anat/sub-amu04_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz +++ b/derivatives/labels_softseg_bin/sub-amu04/anat/sub-amu04_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s7230--df7c18ca708d1d8ef00b36273e0bfba5ef8e14b8dd274e5e4ee1f88ac0f68747.nii.gz +/annex/objects/SHA256E-s7251--aaa95461cf129567cb04ab24b5bdf141d2ba4fd86905bda118c499b75df4429e.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-amu04/anat/sub-amu04_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz b/derivatives/labels_softseg_bin/sub-amu04/anat/sub-amu04_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz index 4bc519646d..02ebae7246 100644 --- a/derivatives/labels_softseg_bin/sub-amu04/anat/sub-amu04_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz +++ b/derivatives/labels_softseg_bin/sub-amu04/anat/sub-amu04_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s7112--15b92b58914f6052d5037a606900a724259196356acbbe4503d464b751d837d1.nii.gz +/annex/objects/SHA256E-s7134--5cc0c2ff73423346c5a54084f9905c9a778ff126408429acefd859593b5e7b43.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-amu05/anat/sub-amu05_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz b/derivatives/labels_softseg_bin/sub-amu05/anat/sub-amu05_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz index 881befa27f..82529bb7ad 100644 --- a/derivatives/labels_softseg_bin/sub-amu05/anat/sub-amu05_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz +++ b/derivatives/labels_softseg_bin/sub-amu05/anat/sub-amu05_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s7351--12636274737ea74154deb65bf872f47cf02c1d21ec61d4cb9903082f63a677a6.nii.gz +/annex/objects/SHA256E-s7381--da285d16613d36a1a205a20ba11c56b890c965e8d8995f5f0420310a3f235835.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-amu05/anat/sub-amu05_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz b/derivatives/labels_softseg_bin/sub-amu05/anat/sub-amu05_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz index 8d905fb6a8..b54f531b8e 100644 --- a/derivatives/labels_softseg_bin/sub-amu05/anat/sub-amu05_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz +++ b/derivatives/labels_softseg_bin/sub-amu05/anat/sub-amu05_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s7223--dbf145079f2346f78431469abb3244709fdfd84803bfffcfa03d28b5de382919.nii.gz 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b/derivatives/labels_softseg_bin/sub-balgrist03/anat/sub-balgrist03_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s7153--efe10acc92075474f87ffa051ad11148494c3a21a27d4a2bca420cb601d3a30c.nii.gz +/annex/objects/SHA256E-s7178--ac37d4cb49f4180215fa56083e96587246f7f7c4c2542b6fc78627bcc0b4064b.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-balgrist03/anat/sub-balgrist03_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz b/derivatives/labels_softseg_bin/sub-balgrist03/anat/sub-balgrist03_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz index c794333bfc..6c653694e4 100644 --- a/derivatives/labels_softseg_bin/sub-balgrist03/anat/sub-balgrist03_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz +++ b/derivatives/labels_softseg_bin/sub-balgrist03/anat/sub-balgrist03_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz @@ -1 +1 @@ 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a/derivatives/labels_softseg_bin/sub-barcelona02/anat/sub-barcelona02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz b/derivatives/labels_softseg_bin/sub-barcelona02/anat/sub-barcelona02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz index c009520ae2..bba1665c8a 100644 --- a/derivatives/labels_softseg_bin/sub-barcelona02/anat/sub-barcelona02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz +++ b/derivatives/labels_softseg_bin/sub-barcelona02/anat/sub-barcelona02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s7368--a8715da73d4fc2495a840adbbbededfd8ac5f3c912571b6942af63e80e2e5fc0.nii.gz +/annex/objects/SHA256E-s7413--4ec57c4f64da0a3c5718bc91883aec912977308a287d57d3f776945284e5b76e.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-barcelona02/anat/sub-barcelona02_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz 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b/derivatives/labels_softseg_bin/sub-cardiff02/anat/sub-cardiff02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz index 04e04929ec..2f0f44c13b 100644 --- a/derivatives/labels_softseg_bin/sub-cardiff02/anat/sub-cardiff02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz +++ b/derivatives/labels_softseg_bin/sub-cardiff02/anat/sub-cardiff02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s7328--9eed28071ab84e78a913bc96cff3d12f43c1574ea6c71d2cdc716dd6c5a3affa.nii.gz +/annex/objects/SHA256E-s7353--f1c6f10c4b80089a44eec77b28b61334c25817ad0718dad8797c2c68b4ad4175.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-cardiff02/anat/sub-cardiff02_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz b/derivatives/labels_softseg_bin/sub-cardiff02/anat/sub-cardiff02_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz index fc7552e169..d54852560f 100644 --- a/derivatives/labels_softseg_bin/sub-cardiff02/anat/sub-cardiff02_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz +++ b/derivatives/labels_softseg_bin/sub-cardiff02/anat/sub-cardiff02_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s7225--c744bf8857fd850237424dd33f734400af51b2c49dad08414c41d473de3eea1f.nii.gz +/annex/objects/SHA256E-s7249--57078d989d765eb3b19e7f40f90703b10ee7450ad9dcac2e7a4d9705931c7f1b.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-cardiff03/anat/sub-cardiff03_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz b/derivatives/labels_softseg_bin/sub-cardiff03/anat/sub-cardiff03_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz index 4588f4839d..264b83b45c 100644 --- a/derivatives/labels_softseg_bin/sub-cardiff03/anat/sub-cardiff03_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz +++ b/derivatives/labels_softseg_bin/sub-cardiff03/anat/sub-cardiff03_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s7319--e6d6dc5d40962cb5805bd5f9840154197ee1edfb62029824d925f0eaf7cbf89c.nii.gz +/annex/objects/SHA256E-s7343--00a8cbd5790cb819e3c644af94a5b8a1fa801f6dc583642ed77630ac7cc2ba10.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-cardiff03/anat/sub-cardiff03_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz b/derivatives/labels_softseg_bin/sub-cardiff03/anat/sub-cardiff03_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz index c0a92768f6..51a1017114 100644 --- a/derivatives/labels_softseg_bin/sub-cardiff03/anat/sub-cardiff03_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz +++ b/derivatives/labels_softseg_bin/sub-cardiff03/anat/sub-cardiff03_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz @@ -1 +1 @@ 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--git a/derivatives/labels_softseg_bin/sub-cardiff04/anat/sub-cardiff04_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz b/derivatives/labels_softseg_bin/sub-cardiff04/anat/sub-cardiff04_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz index 9c1f10f040..a02e54a7f6 100644 --- a/derivatives/labels_softseg_bin/sub-cardiff04/anat/sub-cardiff04_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz +++ b/derivatives/labels_softseg_bin/sub-cardiff04/anat/sub-cardiff04_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s7239--5dd35c7bdecd03cb02535b3576520b739ed86c25fcd33ba80ade56adce2fc9c2.nii.gz +/annex/objects/SHA256E-s7260--449886d92fba8438770b5cb2cd0b5f1fde96e0cb1a7f2ccde907e596878f11ca.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-cardiff05/anat/sub-cardiff05_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz 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b/derivatives/labels_softseg_bin/sub-cardiff06/anat/sub-cardiff06_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s7326--e1601f6989f65ddd4448385620ac90c557d071d3991bf66827421b3e2ffcb940.nii.gz +/annex/objects/SHA256E-s7367--07ab75f9034f81e7508eb0698b48a6733778b5d3449df18167f7795697af5c6a.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-cardiff06/anat/sub-cardiff06_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz b/derivatives/labels_softseg_bin/sub-cardiff06/anat/sub-cardiff06_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz index bda4b0a448..c8237fb279 100644 --- a/derivatives/labels_softseg_bin/sub-cardiff06/anat/sub-cardiff06_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz +++ b/derivatives/labels_softseg_bin/sub-cardiff06/anat/sub-cardiff06_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz @@ -1 +1 @@ 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b/derivatives/labels_softseg_bin/sub-cmrra02/anat/sub-cmrra02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz index 697c644402..86c328b117 100644 --- a/derivatives/labels_softseg_bin/sub-cmrra02/anat/sub-cmrra02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz +++ b/derivatives/labels_softseg_bin/sub-cmrra02/anat/sub-cmrra02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s7378--ff4fe5e61652453fddd0ed857dbb24674c9eb43ef482219d82370751d8481cc3.nii.gz +/annex/objects/SHA256E-s7401--7bf31ff7ed6729dfc7fbed387276fb43c8179152f7d089671cfe4ebf6d7a29e8.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-cmrra02/anat/sub-cmrra02_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz b/derivatives/labels_softseg_bin/sub-cmrra02/anat/sub-cmrra02_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz index 4a8237de53..874161cc85 100644 --- a/derivatives/labels_softseg_bin/sub-cmrra02/anat/sub-cmrra02_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz +++ b/derivatives/labels_softseg_bin/sub-cmrra02/anat/sub-cmrra02_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s7294--62a1ed42c20485ff12f1dad8e802b3ae103990887fbe8992531e80228bf17f9b.nii.gz +/annex/objects/SHA256E-s7317--7ba2a1110d6edfba728c0ac58495e28ad99ec64fe86a83ba9392a9bfd50375b9.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-cmrra03/anat/sub-cmrra03_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz b/derivatives/labels_softseg_bin/sub-cmrra03/anat/sub-cmrra03_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz index 4627276752..a0f4ec8faa 100644 --- a/derivatives/labels_softseg_bin/sub-cmrra03/anat/sub-cmrra03_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz +++ b/derivatives/labels_softseg_bin/sub-cmrra03/anat/sub-cmrra03_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s7331--f9c3e7286a79196ea8b946728942fc0257c79d590bd5741c6c806cfcc51f743c.nii.gz +/annex/objects/SHA256E-s7355--54977d1926b04bb29a9e94fdb58d81cbc8dca978db20d7f351ad6203f3a958fe.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-cmrra03/anat/sub-cmrra03_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz b/derivatives/labels_softseg_bin/sub-cmrra03/anat/sub-cmrra03_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz index 510e8749b4..f94314213e 100644 --- a/derivatives/labels_softseg_bin/sub-cmrra03/anat/sub-cmrra03_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz +++ b/derivatives/labels_softseg_bin/sub-cmrra03/anat/sub-cmrra03_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz @@ -1 +1 @@ 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--git a/derivatives/labels_softseg_bin/sub-hamburg03/anat/sub-hamburg03_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz b/derivatives/labels_softseg_bin/sub-hamburg03/anat/sub-hamburg03_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz index 8e663be7cc..b4423df1e1 100644 --- a/derivatives/labels_softseg_bin/sub-hamburg03/anat/sub-hamburg03_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz +++ b/derivatives/labels_softseg_bin/sub-hamburg03/anat/sub-hamburg03_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s7273--465236dcad1667a51a4207ca223c6b62f804ef6e9bcd7181ef56883e54fc96cd.nii.gz +/annex/objects/SHA256E-s7298--9bf88a4049ed99f38333f64d7531aa017fe5fe6e842a1f849688d1880a885920.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-hamburg04/anat/sub-hamburg04_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz 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a/derivatives/labels_softseg_bin/sub-milan03/anat/sub-milan03_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz +++ b/derivatives/labels_softseg_bin/sub-milan03/anat/sub-milan03_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s7217--9cbb003a0125692d2fe17f3ccd61ebbc086504d68dbf62cc0fc0280f82bcfaae.nii.gz +/annex/objects/SHA256E-s7259--153a90d807028bcd3100bc7e9646279714c0038a99433c496da3ba395d2ac72e.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-milan04/anat/sub-milan04_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz b/derivatives/labels_softseg_bin/sub-milan04/anat/sub-milan04_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz index 5c7f6df426..90e7ef1549 100644 --- a/derivatives/labels_softseg_bin/sub-milan04/anat/sub-milan04_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz +++ b/derivatives/labels_softseg_bin/sub-milan04/anat/sub-milan04_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s7311--8388a5d43b314991d4214028336cb59617197ef20c2e235ca62f445cecfbd871.nii.gz +/annex/objects/SHA256E-s7355--7e3134a8e3e4a2fe0dd071b6d564ad5789ff0def4e68ef7b6c045262f23712ee.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-milan04/anat/sub-milan04_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz b/derivatives/labels_softseg_bin/sub-milan04/anat/sub-milan04_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz index 3a40aa7e94..58093e5fe5 100644 --- a/derivatives/labels_softseg_bin/sub-milan04/anat/sub-milan04_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz +++ b/derivatives/labels_softseg_bin/sub-milan04/anat/sub-milan04_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz @@ -1 +1 @@ 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a/derivatives/labels_softseg_bin/sub-milan05/anat/sub-milan05_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz b/derivatives/labels_softseg_bin/sub-milan05/anat/sub-milan05_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz index 620b636add..5328dec052 100644 --- a/derivatives/labels_softseg_bin/sub-milan05/anat/sub-milan05_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz +++ b/derivatives/labels_softseg_bin/sub-milan05/anat/sub-milan05_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s7302--3821585bd1f5f7a0ad7b2590302f080035cf5f8d391c04a612749cb243211306.nii.gz +/annex/objects/SHA256E-s7324--d9e7ef3c75031e21c0b8031991a621951dca2a1a74869c7e061f56192e00c938.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-milan06/anat/sub-milan06_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz 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b/derivatives/labels_softseg_bin/sub-milan07/anat/sub-milan07_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s7220--da5bd912633b85ad0aaa2c32f4d52bb3bf89e752410135932ac3ea9fb2bcac71.nii.gz +/annex/objects/SHA256E-s7241--ec8d85559ffe44b6e38bf86a8e2b250090a2127071f9196883f49e1455f0aaba.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-milan07/anat/sub-milan07_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz b/derivatives/labels_softseg_bin/sub-milan07/anat/sub-milan07_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz index 17018e6a0c..1b3d61bce9 100644 --- a/derivatives/labels_softseg_bin/sub-milan07/anat/sub-milan07_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz +++ b/derivatives/labels_softseg_bin/sub-milan07/anat/sub-milan07_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz @@ -1 +1 @@ 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--git a/derivatives/labels_softseg_bin/sub-mniPilot1/anat/sub-mniPilot1_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz b/derivatives/labels_softseg_bin/sub-mniPilot1/anat/sub-mniPilot1_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz index 0a26a2709a..a7230e0217 100644 --- a/derivatives/labels_softseg_bin/sub-mniPilot1/anat/sub-mniPilot1_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz +++ b/derivatives/labels_softseg_bin/sub-mniPilot1/anat/sub-mniPilot1_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s7225--a59c6076f7233bbf0aefe79cb82ad850c57dc556e1ec5599fd79cde63122c0a9.nii.gz +/annex/objects/SHA256E-s7247--b2648a4cf3301c3d3ba3a9c48180e0bce59ab89e2c8e6d6d64feb56ecc05d6e2.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-mniS01/anat/sub-mniS01_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz b/derivatives/labels_softseg_bin/sub-mniS01/anat/sub-mniS01_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz index e8eb899fcc..9c5daee72f 100644 --- a/derivatives/labels_softseg_bin/sub-mniS01/anat/sub-mniS01_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz +++ b/derivatives/labels_softseg_bin/sub-mniS01/anat/sub-mniS01_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s7357--fd913e0458eddb278277958c44a5ca6982432351b2df62160a15e033100e599b.nii.gz +/annex/objects/SHA256E-s7391--086e02e745eab9d0c0e3ef7f28dc65149065b51fc9b508e583f633c647e0e81f.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-mniS01/anat/sub-mniS01_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz b/derivatives/labels_softseg_bin/sub-mniS01/anat/sub-mniS01_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz index 48ebc3c7a7..70a73759ce 100644 --- a/derivatives/labels_softseg_bin/sub-mniS01/anat/sub-mniS01_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz +++ b/derivatives/labels_softseg_bin/sub-mniS01/anat/sub-mniS01_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s7259--b9c328d3b70b049b3fcc968ebf713e45407e3105376c4b83f73cabd508861d13.nii.gz +/annex/objects/SHA256E-s7297--761fddc7e3915980f214fbf50db0ff246972a03ea2020ee284347b2b57f04762.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-mniS02/anat/sub-mniS02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz b/derivatives/labels_softseg_bin/sub-mniS02/anat/sub-mniS02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz index 0011a99060..612177fd48 100644 --- a/derivatives/labels_softseg_bin/sub-mniS02/anat/sub-mniS02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz +++ b/derivatives/labels_softseg_bin/sub-mniS02/anat/sub-mniS02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s7227--dd3018ef0f62089d7ca14a94afd766073a9eb6889f8cb14a7b8416d87ecd5428.nii.gz +/annex/objects/SHA256E-s7278--cba044207bbca62234651e43898a02d6e61a11087ee8f664fb80ca83065aaddb.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-mniS02/anat/sub-mniS02_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz b/derivatives/labels_softseg_bin/sub-mniS02/anat/sub-mniS02_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz index a5d942293c..d23c0d4922 100644 --- a/derivatives/labels_softseg_bin/sub-mniS02/anat/sub-mniS02_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz +++ b/derivatives/labels_softseg_bin/sub-mniS02/anat/sub-mniS02_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz @@ -1 +1 @@ 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a/derivatives/labels_softseg_bin/sub-mniS03/anat/sub-mniS03_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz b/derivatives/labels_softseg_bin/sub-mniS03/anat/sub-mniS03_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz index f3fcc25fbb..643eec70f3 100644 --- a/derivatives/labels_softseg_bin/sub-mniS03/anat/sub-mniS03_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz +++ b/derivatives/labels_softseg_bin/sub-mniS03/anat/sub-mniS03_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s7140--7223d5796a76897dcfa15217712ea6e8037e00112113b52bda73fa0c3574f29d.nii.gz +/annex/objects/SHA256E-s7164--a7eb847c7ce56800485710efbb79d67f3ee64ab1068757b41eda4799fd4e1f0d.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-mniS04/anat/sub-mniS04_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz b/derivatives/labels_softseg_bin/sub-mniS04/anat/sub-mniS04_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz index 45b227c6e2..8ea0951e4c 100644 --- a/derivatives/labels_softseg_bin/sub-mniS04/anat/sub-mniS04_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz +++ b/derivatives/labels_softseg_bin/sub-mniS04/anat/sub-mniS04_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s7366--a924440c9174c98a566f434c98d585199d72a0ab3baa0882775a09cdef48180d.nii.gz +/annex/objects/SHA256E-s7390--e2909fcbb48bb68b25a252ce5130bab94f87bf2b11517ebe0542a1d0119cfe5b.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-mniS04/anat/sub-mniS04_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz b/derivatives/labels_softseg_bin/sub-mniS04/anat/sub-mniS04_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz index 48e2a6610e..dbfdc12149 100644 --- a/derivatives/labels_softseg_bin/sub-mniS04/anat/sub-mniS04_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz +++ b/derivatives/labels_softseg_bin/sub-mniS04/anat/sub-mniS04_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s7274--2328960b54131cfeff5f036cb5969ebbd6c8bd4639d9cb08539d8fa7f09ab386.nii.gz +/annex/objects/SHA256E-s7299--a458cf2df6f24fdf0832fbdb6e84e9526d8e471736a184d7f16ea134f4400c5e.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-mniS05/anat/sub-mniS05_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz b/derivatives/labels_softseg_bin/sub-mniS05/anat/sub-mniS05_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz index c489a9c9a5..299a13fcc1 100644 --- a/derivatives/labels_softseg_bin/sub-mniS05/anat/sub-mniS05_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz +++ b/derivatives/labels_softseg_bin/sub-mniS05/anat/sub-mniS05_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s7230--fb2c5cc6ff1ca113381805445fa742b9fd939897a1e4a94381b9ab749a301fe3.nii.gz +/annex/objects/SHA256E-s7255--5a555a056637c665da423be8230b3e8670ee2c3fa106e20174267905bc3cecab.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-mniS05/anat/sub-mniS05_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz b/derivatives/labels_softseg_bin/sub-mniS05/anat/sub-mniS05_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz index 7550eb093a..afb7a118ec 100644 --- a/derivatives/labels_softseg_bin/sub-mniS05/anat/sub-mniS05_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz +++ b/derivatives/labels_softseg_bin/sub-mniS05/anat/sub-mniS05_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s7171--ab9dd5db33f26e3a0638a57a7e8dc300d2b9962648340c6a9adfe1a7530401ac.nii.gz +/annex/objects/SHA256E-s7195--b46365cf93fbec2aa1f39bafcac7636e28c67abf82d86dd055d02fcaee13869b.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-mniS06/anat/sub-mniS06_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz b/derivatives/labels_softseg_bin/sub-mniS06/anat/sub-mniS06_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz index 5d46957c08..c8c04e2e8e 100644 --- a/derivatives/labels_softseg_bin/sub-mniS06/anat/sub-mniS06_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz +++ b/derivatives/labels_softseg_bin/sub-mniS06/anat/sub-mniS06_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s7390--029be1e427654245d47b2c7b256c8eb9d4427a1f66e5c616423686f0db44cbe6.nii.gz +/annex/objects/SHA256E-s7431--90d4c48744f85bf0a212c923a9c19de80757f21d7dca667fcb2319c2d0bb8bfc.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-mniS06/anat/sub-mniS06_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz b/derivatives/labels_softseg_bin/sub-mniS06/anat/sub-mniS06_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz index 9d450eb4cb..30a379d416 100644 --- a/derivatives/labels_softseg_bin/sub-mniS06/anat/sub-mniS06_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz +++ b/derivatives/labels_softseg_bin/sub-mniS06/anat/sub-mniS06_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s7249--7e05fc4be56f5db62266833f61c653085d115799bad7760dae3e33de677862f1.nii.gz +/annex/objects/SHA256E-s7295--6463d0c099c84f43870e8c6cef576c41ba872cbb3d634660f3694c83b50ebe77.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-mniS07/anat/sub-mniS07_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz 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b/derivatives/labels_softseg_bin/sub-mniS08/anat/sub-mniS08_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s7419--c1b944bfe12b4b03264867f46df8d139b4da577c7310adda8b886c3bf056ee3d.nii.gz +/annex/objects/SHA256E-s7466--cb92f8ad5c20cec7bc560b3e94ce566430a5d51cc9000cd8eb02fd4d2a8a981d.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-mniS08/anat/sub-mniS08_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz b/derivatives/labels_softseg_bin/sub-mniS08/anat/sub-mniS08_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz index 19f36a311d..f96b38f0be 100644 --- a/derivatives/labels_softseg_bin/sub-mniS08/anat/sub-mniS08_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz +++ b/derivatives/labels_softseg_bin/sub-mniS08/anat/sub-mniS08_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz @@ -1 +1 @@ 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b/derivatives/labels_softseg_bin/sub-mountSinai02/anat/sub-mountSinai02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s7290--2a449826eb81fe0aaed93626fd30942c6895bdc90229ad9aefb8514e63c821e4.nii.gz +/annex/objects/SHA256E-s7313--a39909cefc4ea6292191dbbca919c30d9472e6824647717beab5b937f2e01598.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-mountSinai02/anat/sub-mountSinai02_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz b/derivatives/labels_softseg_bin/sub-mountSinai02/anat/sub-mountSinai02_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz index a515356f80..71e4eb3eb4 100644 --- a/derivatives/labels_softseg_bin/sub-mountSinai02/anat/sub-mountSinai02_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz +++ b/derivatives/labels_softseg_bin/sub-mountSinai02/anat/sub-mountSinai02_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz @@ -1 +1 @@ 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a/derivatives/labels_softseg_bin/sub-mountSinai05/anat/sub-mountSinai05_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz b/derivatives/labels_softseg_bin/sub-mountSinai05/anat/sub-mountSinai05_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz index 925896767a..dbcc86f5aa 100644 --- a/derivatives/labels_softseg_bin/sub-mountSinai05/anat/sub-mountSinai05_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz +++ b/derivatives/labels_softseg_bin/sub-mountSinai05/anat/sub-mountSinai05_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s7279--49180a22403848510efd04d9ebc5585d12fd3bc8b40c9242519b1951bce7d18b.nii.gz +/annex/objects/SHA256E-s7303--865dffe5c68aeba8b25f3b36dc1cac4b346a6f1a418ab43e1e05031ab9ac4bc6.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-mountSinai05/anat/sub-mountSinai05_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz 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b/derivatives/labels_softseg_bin/sub-mountSinai06/anat/sub-mountSinai06_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s7203--e55259f936abaf27d04435b96eb5d3e4fd01ddd1635e2f7121090af60153151a.nii.gz +/annex/objects/SHA256E-s7230--6dfd5e23964aa7d28a99a28ab844c55e14ba7bd03401033e1cb8efded70b30e8.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-mpicbs01/anat/sub-mpicbs01_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz b/derivatives/labels_softseg_bin/sub-mpicbs01/anat/sub-mpicbs01_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz index 97d99631ad..ed8af6d3f9 100644 --- a/derivatives/labels_softseg_bin/sub-mpicbs01/anat/sub-mpicbs01_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz +++ b/derivatives/labels_softseg_bin/sub-mpicbs01/anat/sub-mpicbs01_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz @@ -1 +1 @@ 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a/derivatives/labels_softseg_bin/sub-tokyoSkyra07/anat/sub-tokyoSkyra07_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz +++ b/derivatives/labels_softseg_bin/sub-tokyoSkyra07/anat/sub-tokyoSkyra07_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s7269--d6e9cc47f03e4615e0ede1d2b9c5f2d38878ae9ce72b548ca94e3eff23b68a79.nii.gz +/annex/objects/SHA256E-s7292--34e5ce97aae56605d1aaf3c9c9392b04c3f0424e1506fbdf52e7baf723dbec87.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-ubc02/anat/sub-ubc02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz b/derivatives/labels_softseg_bin/sub-ubc02/anat/sub-ubc02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz index 1df3c05d44..2f2bba3ab7 100644 --- a/derivatives/labels_softseg_bin/sub-ubc02/anat/sub-ubc02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz +++ b/derivatives/labels_softseg_bin/sub-ubc02/anat/sub-ubc02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s7388--fbbd9f4fecd962171b533cd047e7a1ef19dccdc88ab4bd1ad11c9c24569b44b3.nii.gz +/annex/objects/SHA256E-s7420--dc318fc4388f524186ff401d706bc8e594916e772fc60b0a0a00c0c3b21f1516.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-ubc02/anat/sub-ubc02_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz b/derivatives/labels_softseg_bin/sub-ubc02/anat/sub-ubc02_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz index d0b282c843..3ac73681eb 100644 --- a/derivatives/labels_softseg_bin/sub-ubc02/anat/sub-ubc02_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz +++ b/derivatives/labels_softseg_bin/sub-ubc02/anat/sub-ubc02_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s7243--d4d5b6ce72fa29a82214cdef28edb5441062f7d365d2256d8b8509d8b1135896.nii.gz 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b/derivatives/labels_softseg_bin/sub-ubc03/anat/sub-ubc03_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz index 65983020e7..23be63b379 100644 --- a/derivatives/labels_softseg_bin/sub-ubc03/anat/sub-ubc03_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz +++ b/derivatives/labels_softseg_bin/sub-ubc03/anat/sub-ubc03_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s7408--3acde8825f3167e6574ce36ae0cce74be990299dd4076e2f90cad2049255203e.nii.gz +/annex/objects/SHA256E-s7436--61b0998284101be68a67e4dfa5aade39748d9cee1f424f8e03232783edd3dfe6.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-ubc04/anat/sub-ubc04_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz b/derivatives/labels_softseg_bin/sub-ubc04/anat/sub-ubc04_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz index 9bdee5576a..b7d353a612 100644 --- 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index 4a1bcadf5b..40ae7bcd04 100644 --- a/derivatives/labels_softseg_bin/sub-ubc06/anat/sub-ubc06_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz +++ b/derivatives/labels_softseg_bin/sub-ubc06/anat/sub-ubc06_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s7408--960e6d82dea302d9ba2db3c9d834eab0152edc6399471841b2b376d6da8f32fe.nii.gz +/annex/objects/SHA256E-s7431--879c40836d02c38342ce04074d9f563fcbbdb1710b5cf0e09b63da334c589e3d.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-ubc06/anat/sub-ubc06_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz b/derivatives/labels_softseg_bin/sub-ubc06/anat/sub-ubc06_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz index 334ff47c9f..4233185ebe 100644 --- a/derivatives/labels_softseg_bin/sub-ubc06/anat/sub-ubc06_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz +++ 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b/derivatives/labels_softseg_bin/sub-ucl02/anat/sub-ucl02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz index 519ee9683b..e0f04c4a2c 100644 --- a/derivatives/labels_softseg_bin/sub-ucl02/anat/sub-ucl02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz +++ b/derivatives/labels_softseg_bin/sub-ucl02/anat/sub-ucl02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s7460--dde1405f324b06817ce37779c0474aa2d6d56368dd980978f88406644bede51e.nii.gz +/annex/objects/SHA256E-s7488--d452154c412b6a6896598d0906746c704832fc92f15f89531c287a5906fb2625.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-ucl02/anat/sub-ucl02_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz b/derivatives/labels_softseg_bin/sub-ucl02/anat/sub-ucl02_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz index 75de2bde72..f539a96273 100644 --- 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18a0645900..ace661ae84 100644 --- a/derivatives/labels_softseg_bin/sub-ucl04/anat/sub-ucl04_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz +++ b/derivatives/labels_softseg_bin/sub-ucl04/anat/sub-ucl04_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s7314--fb608a17f4a36dec6dce6ea204af9dcca36d0b7fe6b05d2c9938708174602b5b.nii.gz +/annex/objects/SHA256E-s7345--3938eed32e5e3515f0f2264efe5a1f83751c60c8140c6111deac05fd7f704226.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-ucl05/anat/sub-ucl05_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz b/derivatives/labels_softseg_bin/sub-ucl05/anat/sub-ucl05_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz index 9dc7195951..b6f6eefda1 100644 --- a/derivatives/labels_softseg_bin/sub-ucl05/anat/sub-ucl05_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz +++ b/derivatives/labels_softseg_bin/sub-ucl05/anat/sub-ucl05_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s7415--a650a75b22558d1d0ea8af124e228e2027e9aa71c41fe2d3cabd77c8dae456bf.nii.gz +/annex/objects/SHA256E-s7440--621abe656e13cf048e0228edddc6f0cc649904ebbcee7812cecdc72af0a9285d.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-ucl05/anat/sub-ucl05_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz b/derivatives/labels_softseg_bin/sub-ucl05/anat/sub-ucl05_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz index 9ba28ca7e1..585e35fc65 100644 --- a/derivatives/labels_softseg_bin/sub-ucl05/anat/sub-ucl05_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz +++ b/derivatives/labels_softseg_bin/sub-ucl05/anat/sub-ucl05_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s7338--05bd0dda1030bbb1099d310e35cb773621780728495bc807004986562f2ebbc2.nii.gz 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b/derivatives/labels_softseg_bin/sub-ucl06/anat/sub-ucl06_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz index f5222af680..0d243df9a0 100644 --- a/derivatives/labels_softseg_bin/sub-ucl06/anat/sub-ucl06_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz +++ b/derivatives/labels_softseg_bin/sub-ucl06/anat/sub-ucl06_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s7298--14354f844d9cd6cb345cb76c9b0c3f454862715ba8314f2a6e3be046f3dff05a.nii.gz +/annex/objects/SHA256E-s7325--a6fb4775f7585ae26e5a6650693709f2f14a01e96bb5fd803449cdd0ba290118.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-unf01/anat/sub-unf01_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz b/derivatives/labels_softseg_bin/sub-unf01/anat/sub-unf01_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz index ecd7457b12..787ebc5a8d 100644 --- 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index 45a7abb51e..73f216e804 100644 --- a/derivatives/labels_softseg_bin/sub-unf03/anat/sub-unf03_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz +++ b/derivatives/labels_softseg_bin/sub-unf03/anat/sub-unf03_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s7257--440d3b9873c6c315ac840470b75e8055f7425832efce778c94d06f4db6c2d733.nii.gz +/annex/objects/SHA256E-s7282--6c393bf088d2ac49091c95377db7c4809d71ab198383af4379c313c55929c512.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-unf03/anat/sub-unf03_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz b/derivatives/labels_softseg_bin/sub-unf03/anat/sub-unf03_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz index e85c12c7a2..eacb80698f 100644 --- a/derivatives/labels_softseg_bin/sub-unf03/anat/sub-unf03_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz +++ 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files changed, 513 insertions(+), 513 deletions(-) diff --git a/derivatives/labels/sub-amu01/anat/sub-amu01_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz b/derivatives/labels/sub-amu01/anat/sub-amu01_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz index b9961edf9e..6c0a6e1c64 100644 --- a/derivatives/labels/sub-amu01/anat/sub-amu01_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-amu01/anat/sub-amu01_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s3442--a25d5ece8feb2d456cda914116c1896f83b75af231c7a2f858fc6e819c5306c3.nii.gz +/annex/objects/SHA256E-s13937--14c91119d0c5e6f93dcdddab9dbb0e848091b5ae05a760dd1ad4e16188069bd9.nii.gz diff --git a/derivatives/labels/sub-amu01/anat/sub-amu01_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz b/derivatives/labels/sub-amu01/anat/sub-amu01_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz index 30baa49a10..75a35be41c 100644 --- a/derivatives/labels/sub-amu01/anat/sub-amu01_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-amu01/anat/sub-amu01_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s7219--fbf00861ceb22756f7d9891a63496c1583e736df39f7b2b23ea9e3d145daa4bd.nii.gz +/annex/objects/SHA256E-s7235--76473afc85950903dae683828dd57e7f7f1fc57e01da6a98aa443b7c6cf46cd9.nii.gz diff --git a/derivatives/labels/sub-amu02/anat/sub-amu02_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz b/derivatives/labels/sub-amu02/anat/sub-amu02_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz index f871471168..6dca584ee3 100644 --- a/derivatives/labels/sub-amu02/anat/sub-amu02_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-amu02/anat/sub-amu02_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s7360--63ecfd471ea21bbfb6f1e92f3e8e220d7d3808f14214d048c74d58c68b51af79.nii.gz 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a/derivatives/labels/sub-cardiff06/anat/sub-cardiff06_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-cardiff06/anat/sub-cardiff06_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s7313--c59c512c6a089350a367c43acdcce4d0892f89764c422fc0b74448febb1d5081.nii.gz +/annex/objects/SHA256E-s7281--0ad91b58ebea5a7cad15b081f7856f4612b1b366a677c90c3ff849ba0eb85082.nii.gz diff --git a/derivatives/labels/sub-cardiff06/anat/sub-cardiff06_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz b/derivatives/labels/sub-cardiff06/anat/sub-cardiff06_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz index 68b5ebd6c8..b541e4ea33 100644 --- a/derivatives/labels/sub-cardiff06/anat/sub-cardiff06_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-cardiff06/anat/sub-cardiff06_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz @@ -1 +1 @@ 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a/derivatives/labels/sub-fslPrisma06/anat/sub-fslPrisma06_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-fslPrisma06/anat/sub-fslPrisma06_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s3345--8ef183efc59ef517e9c9c372100814153ac3ab0850da83375d9cc129ae059598.nii.gz +/annex/objects/SHA256E-s13804--8e33e7ef62fd4be9f79776742d179907a5850be4f07c835ad066968b096cdc45.nii.gz diff --git a/derivatives/labels/sub-geneva01/anat/sub-geneva01_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz b/derivatives/labels/sub-geneva01/anat/sub-geneva01_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz index a539d19c56..93992091cb 100644 --- a/derivatives/labels/sub-geneva01/anat/sub-geneva01_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-geneva01/anat/sub-geneva01_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz @@ -1 +1 @@ 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a/derivatives/labels/sub-hamburg01/anat/sub-hamburg01_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-hamburg01/anat/sub-hamburg01_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s3307--c926647aee954953899439a008618f562330ed7b6afa1a675ba1d232ff84b192.nii.gz +/annex/objects/SHA256E-s13652--021c8cf126f6dc93bed320e1b82e56a429d92e6dd04713fe6bfbd33641fc0804.nii.gz diff --git a/derivatives/labels/sub-hamburg02/anat/sub-hamburg02_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz b/derivatives/labels/sub-hamburg02/anat/sub-hamburg02_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz index 5d10ed434a..25f2a3adea 100644 --- a/derivatives/labels/sub-hamburg02/anat/sub-hamburg02_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-hamburg02/anat/sub-hamburg02_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz @@ -1 +1 @@ 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a/derivatives/labels/sub-hamburg03/anat/sub-hamburg03_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-hamburg03/anat/sub-hamburg03_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s3370--014d57e411a6311b1335045754083c0e65646fdcda9a730e17899d581c263af3.nii.gz +/annex/objects/SHA256E-s13812--8d779f31d232e73e450282cdf8c466e5c0bf9df7ec91d44c65355b93b7acf49d.nii.gz diff --git a/derivatives/labels/sub-hamburg04/anat/sub-hamburg04_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz b/derivatives/labels/sub-hamburg04/anat/sub-hamburg04_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz index 39304c1e05..5b2d001c3e 100644 --- a/derivatives/labels/sub-hamburg04/anat/sub-hamburg04_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-hamburg04/anat/sub-hamburg04_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz @@ -1 +1 @@ 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@@ -1 +1 @@ -/annex/objects/SHA256E-s3298--95aa2da0e0aa9974c0157c2fb32821da653d79744eb9ffeff1299b773611cd16.nii.gz +/annex/objects/SHA256E-s13568--0223c44c87732111c902ff8c09279b0ec42fc294d8a72deeb8b7b50b55480fe2.nii.gz diff --git a/derivatives/labels/sub-mniS04/anat/sub-mniS04_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz b/derivatives/labels/sub-mniS04/anat/sub-mniS04_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz index abc3e1ea8f..8739745985 100644 --- a/derivatives/labels/sub-mniS04/anat/sub-mniS04_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-mniS04/anat/sub-mniS04_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s3467--fa85297274e4eae4c82abb99ddafbbfdb08ff94956c52c8bfe1470034df22e44.nii.gz +/annex/objects/SHA256E-s14016--593d31db58c76f055095c8de856207910655a94c12d32204a1d14a1649924700.nii.gz diff --git a/derivatives/labels/sub-mniS04/anat/sub-mniS04_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz b/derivatives/labels/sub-mniS04/anat/sub-mniS04_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz index 12a25ca737..0190efe89e 100644 --- a/derivatives/labels/sub-mniS04/anat/sub-mniS04_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-mniS04/anat/sub-mniS04_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s7270--abd58ec1592030ac47d5d72cb084a9871d3a4ec7f18b8eb34290e547bb1284f1.nii.gz +/annex/objects/SHA256E-s7248--0c1758a9fcaf81901034f8cb8a666768333bcad3eda6350a34f476f296d30d64.nii.gz diff --git a/derivatives/labels/sub-mniS05/anat/sub-mniS05_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz b/derivatives/labels/sub-mniS05/anat/sub-mniS05_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz index 0eef2dbbc5..0cfe7fc048 100644 --- a/derivatives/labels/sub-mniS05/anat/sub-mniS05_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-mniS05/anat/sub-mniS05_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz 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@@ -1 +1 @@ -/annex/objects/SHA256E-s3393--1c1679365c9d7c7f264ff1096a36682fc6461ae6f7bbb306019a488b546e0f7e.nii.gz +/annex/objects/SHA256E-s13829--ff63195b29896f095abc52297ada009e6943e08b7dd3400653c66f280aa3645e.nii.gz diff --git a/derivatives/labels/sub-mniS07/anat/sub-mniS07_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz b/derivatives/labels/sub-mniS07/anat/sub-mniS07_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz index 4381beea58..f7a56c91cb 100644 --- a/derivatives/labels/sub-mniS07/anat/sub-mniS07_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-mniS07/anat/sub-mniS07_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s7267--53daa5910d06142324026b1d0b732dcdb61c2dcc5e3ad1cc09d442712e7950db.nii.gz +/annex/objects/SHA256E-s7273--5345978cb2b2f1c3ef8b484d236e3482b20e671d6ecaed73a8626745e715cc68.nii.gz diff --git a/derivatives/labels/sub-mniS07/anat/sub-mniS07_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz 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index 48d957b100..08e855216d 100644 --- a/derivatives/labels/sub-mpicbs03/anat/sub-mpicbs03_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-mpicbs03/anat/sub-mpicbs03_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s3372--e6bf81d5cf33e09769638af80f0946cf4527cad63ff1d1dbaa0b0805248cacb9.nii.gz +/annex/objects/SHA256E-s13846--44c5161fbc4f869a3eb9b011754f7196ddb97735502b11c43502eeb86e2d1b52.nii.gz diff --git a/derivatives/labels/sub-mpicbs05/anat/sub-mpicbs05_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz b/derivatives/labels/sub-mpicbs05/anat/sub-mpicbs05_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz index 6d656a7820..d8ccbb2231 100644 --- a/derivatives/labels/sub-mpicbs05/anat/sub-mpicbs05_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-mpicbs05/anat/sub-mpicbs05_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz @@ -1 +1 @@ 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+/annex/objects/SHA256E-s14093--18212ccb3af31cc1a17b297d41f88e74777fed28834e9191d8ffc7d5aa713b17.nii.gz diff --git a/derivatives/labels/sub-vuiisIngenia06/anat/sub-vuiisIngenia06_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz b/derivatives/labels/sub-vuiisIngenia06/anat/sub-vuiisIngenia06_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz index 40ae948cdf..0ce7c91cdb 100644 --- a/derivatives/labels/sub-vuiisIngenia06/anat/sub-vuiisIngenia06_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-vuiisIngenia06/anat/sub-vuiisIngenia06_flip-1_mt-on_space-other_MTS_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s7445--6d2a403bb2727f1b966ccac9d87f248e691fc2ae3ce4289fab633a280cbd8be3.nii.gz +/annex/objects/SHA256E-s7403--7dc6dfbe49c41aff806779ac51c9161cb4ef13fa050654f152b98019d422c5ab.nii.gz diff --git a/derivatives/labels/sub-vuiisIngenia06/anat/sub-vuiisIngenia06_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz b/derivatives/labels/sub-vuiisIngenia06/anat/sub-vuiisIngenia06_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz index 9b6545496d..b24bc0e728 100644 --- a/derivatives/labels/sub-vuiisIngenia06/anat/sub-vuiisIngenia06_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz +++ b/derivatives/labels/sub-vuiisIngenia06/anat/sub-vuiisIngenia06_flip-2_mt-off_space-other_MTS_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s7337--259f12f0c8852acf87639c1be8e2af3dfbd0da5053743313d4d9cc12748d5420.nii.gz +/annex/objects/SHA256E-s7335--05d599f74149b78488577694b368aecd82f9356cf00ba6be3952225af94a60d4.nii.gz From 3aff1312c00cfdb519963196e286dc676b728239 Mon Sep 17 00:00:00 2001 From: =?UTF-8?q?Sandrine=20B=C3=A9dard?= <71230552+sandrinebedard@users.noreply.github.com> Date: Thu, 28 Mar 2024 13:14:34 -0700 Subject: [PATCH 20/21] Re upload preprocessed data after fresh preprocessing (#161) * add updated labels softseg bin * add updated softseg labels * add preprocessed images * rm excluded 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...rio01_space-other_T2w_label-SC_softseg.json | 8 -------- ...o01_space-other_T2w_label-SC_softseg.nii.gz | 1 - ...rio01_rec-average_dwi_label-SC_softseg.json | 4 ---- ...o01_rec-average_dwi_label-SC_softseg.nii.gz | 1 - ...rio02_space-other_T1w_label-SC_softseg.json | 8 -------- ...o02_space-other_T1w_label-SC_softseg.nii.gz | 1 - ...02_space-other_T2star_label-SC_softseg.json | 8 -------- ..._space-other_T2star_label-SC_softseg.nii.gz | 1 - ...rio02_space-other_T2w_label-SC_softseg.json | 8 -------- ...o02_space-other_T2w_label-SC_softseg.nii.gz | 1 - ...rio02_rec-average_dwi_label-SC_softseg.json | 4 ---- ...o02_rec-average_dwi_label-SC_softseg.nii.gz | 1 - ...rio03_space-other_T1w_label-SC_softseg.json | 8 -------- ...o03_space-other_T1w_label-SC_softseg.nii.gz | 1 - ...03_space-other_T2star_label-SC_softseg.json | 8 -------- ..._space-other_T2star_label-SC_softseg.nii.gz | 1 - ...rio03_space-other_T2w_label-SC_softseg.json | 8 -------- ...o03_space-other_T2w_label-SC_softseg.nii.gz | 1 - ...rio03_rec-average_dwi_label-SC_softseg.json | 4 ---- ...o03_rec-average_dwi_label-SC_softseg.nii.gz | 1 - ...rio04_space-other_T1w_label-SC_softseg.json | 8 -------- ...o04_space-other_T1w_label-SC_softseg.nii.gz | 1 - ...04_space-other_T2star_label-SC_softseg.json | 8 -------- ..._space-other_T2star_label-SC_softseg.nii.gz | 1 - ...rio04_space-other_T2w_label-SC_softseg.json | 8 -------- ...o04_space-other_T2w_label-SC_softseg.nii.gz | 1 - ...rio04_rec-average_dwi_label-SC_softseg.json | 4 ---- ...o04_rec-average_dwi_label-SC_softseg.nii.gz | 1 - ...-on_space-other_MTS_label-SC_softseg.nii.gz | 2 +- ...off_space-other_MTS_label-SC_softseg.nii.gz | 2 +- ...c01_space-other_T1w_label-SC_softseg.nii.gz | 2 +- ..._space-other_T2star_label-SC_softseg.nii.gz | 2 +- ...c01_space-other_T2w_label-SC_softseg.nii.gz | 2 +- ...c01_rec-average_dwi_label-SC_softseg.nii.gz | 2 +- ...-on_space-other_MTS_label-SC_softseg.nii.gz | 2 +- 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..._space-other_T2star_label-SC_softseg.nii.gz | 1 - ...vis05_space-other_T2w_label-SC_softseg.json | 8 -------- ...s05_space-other_T2w_label-SC_softseg.nii.gz | 1 - ...vis05_rec-average_dwi_label-SC_softseg.json | 4 ---- ...s05_rec-average_dwi_label-SC_softseg.nii.gz | 1 - ...mt-on_space-other_MTS_label-SC_softseg.json | 7 ------- ...-on_space-other_MTS_label-SC_softseg.nii.gz | 1 - ...vis06_space-other_T1w_label-SC_softseg.json | 8 -------- ...s06_space-other_T1w_label-SC_softseg.nii.gz | 1 - ...06_space-other_T2star_label-SC_softseg.json | 8 -------- ..._space-other_T2star_label-SC_softseg.nii.gz | 1 - ...vis06_space-other_T2w_label-SC_softseg.json | 8 -------- ...s06_space-other_T2w_label-SC_softseg.nii.gz | 1 - ...vis06_rec-average_dwi_label-SC_softseg.json | 4 ---- ...s06_rec-average_dwi_label-SC_softseg.nii.gz | 1 - ...-on_space-other_MTS_label-SC_softseg.nii.gz | 2 +- ...off_space-other_MTS_label-SC_softseg.nii.gz | 2 +- ...l01_space-other_T1w_label-SC_softseg.nii.gz | 2 +- 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derivatives/labels_softseg/sub-ucdavis04/anat/sub-ucdavis04_space-other_T2star_label-SC_softseg.json delete mode 100644 derivatives/labels_softseg/sub-ucdavis04/anat/sub-ucdavis04_space-other_T2star_label-SC_softseg.nii.gz delete mode 100644 derivatives/labels_softseg/sub-ucdavis04/anat/sub-ucdavis04_space-other_T2w_label-SC_softseg.json delete mode 100644 derivatives/labels_softseg/sub-ucdavis04/anat/sub-ucdavis04_space-other_T2w_label-SC_softseg.nii.gz delete mode 100644 derivatives/labels_softseg/sub-ucdavis05/anat/sub-ucdavis05_flip-1_mt-on_space-other_MTS_label-SC_softseg.json delete mode 100644 derivatives/labels_softseg/sub-ucdavis05/anat/sub-ucdavis05_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz delete mode 100644 derivatives/labels_softseg/sub-ucdavis05/anat/sub-ucdavis05_space-other_T1w_label-SC_softseg.json delete mode 100644 derivatives/labels_softseg/sub-ucdavis05/anat/sub-ucdavis05_space-other_T1w_label-SC_softseg.nii.gz delete mode 100644 derivatives/labels_softseg/sub-ucdavis05/anat/sub-ucdavis05_space-other_T2star_label-SC_softseg.json delete mode 100644 derivatives/labels_softseg/sub-ucdavis05/anat/sub-ucdavis05_space-other_T2star_label-SC_softseg.nii.gz delete mode 100644 derivatives/labels_softseg/sub-ucdavis05/anat/sub-ucdavis05_space-other_T2w_label-SC_softseg.json delete mode 100644 derivatives/labels_softseg/sub-ucdavis05/anat/sub-ucdavis05_space-other_T2w_label-SC_softseg.nii.gz delete mode 100644 derivatives/labels_softseg/sub-ucdavis05/dwi/sub-ucdavis05_rec-average_dwi_label-SC_softseg.json delete mode 100644 derivatives/labels_softseg/sub-ucdavis05/dwi/sub-ucdavis05_rec-average_dwi_label-SC_softseg.nii.gz delete mode 100644 derivatives/labels_softseg/sub-ucdavis06/anat/sub-ucdavis06_flip-1_mt-on_space-other_MTS_label-SC_softseg.json delete mode 100644 derivatives/labels_softseg/sub-ucdavis06/anat/sub-ucdavis06_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz delete mode 100644 derivatives/labels_softseg/sub-ucdavis06/anat/sub-ucdavis06_space-other_T1w_label-SC_softseg.json delete mode 100644 derivatives/labels_softseg/sub-ucdavis06/anat/sub-ucdavis06_space-other_T1w_label-SC_softseg.nii.gz delete mode 100644 derivatives/labels_softseg/sub-ucdavis06/anat/sub-ucdavis06_space-other_T2star_label-SC_softseg.json delete mode 100644 derivatives/labels_softseg/sub-ucdavis06/anat/sub-ucdavis06_space-other_T2star_label-SC_softseg.nii.gz delete mode 100644 derivatives/labels_softseg/sub-ucdavis06/anat/sub-ucdavis06_space-other_T2w_label-SC_softseg.json delete mode 100644 derivatives/labels_softseg/sub-ucdavis06/anat/sub-ucdavis06_space-other_T2w_label-SC_softseg.nii.gz delete mode 100644 derivatives/labels_softseg/sub-ucdavis06/dwi/sub-ucdavis06_rec-average_dwi_label-SC_softseg.json delete mode 100644 derivatives/labels_softseg/sub-ucdavis06/dwi/sub-ucdavis06_rec-average_dwi_label-SC_softseg.nii.gz diff --git a/derivatives/data_preprocessed/README.md b/derivatives/data_preprocessed/README.md index e69de29bb2..a0dcede884 100644 --- a/derivatives/data_preprocessed/README.md +++ b/derivatives/data_preprocessed/README.md @@ -0,0 +1,18 @@ +This folder contains the preprocessed images using [process_data.sh](https://github.com/spine-generic/spine-generic/blob/v2.7/process_data.sh). The preprocessing steps include: + +T2w: + * Resampling to 0.8x0.8x0.8 mm + * Reorientation to RPI +T1w: + * Resampling to 1x1x1 mm + * Reorientation to RPI +T2star: + * Reorientation to RPI + * Root-mean square across 4th dimension (if exists) + +MTS (flip-1_mt-on & flip-2_mt-off): + * Reorientation to RPI + +DWI: + * Motion correction + * Avreage across 4th dimension diff --git a/derivatives/data_preprocessed/sub-amu01/anat/sub-amu01_flip-1_mt-on_space-other_MTS.nii.gz b/derivatives/data_preprocessed/sub-amu01/anat/sub-amu01_flip-1_mt-on_space-other_MTS.nii.gz index cd357938e9..f211bab4c1 100644 --- a/derivatives/data_preprocessed/sub-amu01/anat/sub-amu01_flip-1_mt-on_space-other_MTS.nii.gz +++ b/derivatives/data_preprocessed/sub-amu01/anat/sub-amu01_flip-1_mt-on_space-other_MTS.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s1174064--72cdb319a156a5e816939ed61db2011c78430551d6e755dd36008b0eccb0e24f.nii.gz +/annex/objects/SHA256E-s1174002--9aa6ec79a78cdfa40d54e8ff8ac2d55629d5c5023c0f918e3fb626ce74ea3c3d.nii.gz diff --git a/derivatives/data_preprocessed/sub-amu01/anat/sub-amu01_flip-2_mt-off_space-other_MTS.nii.gz b/derivatives/data_preprocessed/sub-amu01/anat/sub-amu01_flip-2_mt-off_space-other_MTS.nii.gz index 2f6f28fd08..c848347a0c 100644 --- a/derivatives/data_preprocessed/sub-amu01/anat/sub-amu01_flip-2_mt-off_space-other_MTS.nii.gz +++ b/derivatives/data_preprocessed/sub-amu01/anat/sub-amu01_flip-2_mt-off_space-other_MTS.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s1229579--ac8f15be7973fffe0cc98fe21ce32d6d3b7665957ef009067c65ccc683f3523d.nii.gz +/annex/objects/SHA256E-s1229554--48c6bd34de552527ad6bc57d911585113a995f1edb07d33d0d5ec0dd77736e5c.nii.gz diff --git a/derivatives/data_preprocessed/sub-amu01/anat/sub-amu01_space-other_T1w.nii.gz b/derivatives/data_preprocessed/sub-amu01/anat/sub-amu01_space-other_T1w.nii.gz index 48f8ba1a42..49591f106c 100644 --- a/derivatives/data_preprocessed/sub-amu01/anat/sub-amu01_space-other_T1w.nii.gz +++ b/derivatives/data_preprocessed/sub-amu01/anat/sub-amu01_space-other_T1w.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s23710728--8bbf45c2ec80ae402524b6387812691b9fda1a63c252e87bcb1a5f82ab48834a.nii.gz +/annex/objects/SHA256E-s23710700--66c80142b561cbc866085afe62d39f37e1af8496fc2afba105e686d7083da4f4.nii.gz diff --git a/derivatives/data_preprocessed/sub-amu01/anat/sub-amu01_space-other_T2star.nii.gz b/derivatives/data_preprocessed/sub-amu01/anat/sub-amu01_space-other_T2star.nii.gz index dab6943956..3e03d658a1 100644 --- a/derivatives/data_preprocessed/sub-amu01/anat/sub-amu01_space-other_T2star.nii.gz +++ b/derivatives/data_preprocessed/sub-amu01/anat/sub-amu01_space-other_T2star.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s4960583--db316618b4f12f1aff280cfad77e282511c8302eb1c9cb063167df2ba9003654.nii.gz +/annex/objects/SHA256E-s4960516--375a95497f05f233b094c89082aeb51086786aba690238e97d6f9fb00e7a9e8b.nii.gz diff --git a/derivatives/data_preprocessed/sub-amu01/anat/sub-amu01_space-other_T2w.nii.gz b/derivatives/data_preprocessed/sub-amu01/anat/sub-amu01_space-other_T2w.nii.gz index 4b1769eb04..4884733697 100644 --- a/derivatives/data_preprocessed/sub-amu01/anat/sub-amu01_space-other_T2w.nii.gz +++ b/derivatives/data_preprocessed/sub-amu01/anat/sub-amu01_space-other_T2w.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s8880646--408092001006f59c808a5bc2f835f0d3eab64e035325cfd3013c6560458fe66a.nii.gz +/annex/objects/SHA256E-s8880618--c0789954a1212e7c58299356ec4f06bdf09188f44c7f9df4ce4c68f05b12b3f1.nii.gz diff --git a/derivatives/data_preprocessed/sub-amu01/dwi/sub-amu01_rec-average_dwi.nii.gz b/derivatives/data_preprocessed/sub-amu01/dwi/sub-amu01_rec-average_dwi.nii.gz index 8f37d77cbc..414d9d2e15 100644 --- a/derivatives/data_preprocessed/sub-amu01/dwi/sub-amu01_rec-average_dwi.nii.gz +++ b/derivatives/data_preprocessed/sub-amu01/dwi/sub-amu01_rec-average_dwi.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s1039779--37bcc866b10530b47e843bc03c0ff0c93703c07167b8b816fd4b937be83688d3.nii.gz +/annex/objects/SHA256E-s1039743--8c3bd2d0d33d183ef63bdcee8d3050fb5f5adf920bad364857ea9c8d09b8d7a3.nii.gz diff --git a/derivatives/data_preprocessed/sub-amu02/anat/sub-amu02_flip-1_mt-on_space-other_MTS.nii.gz b/derivatives/data_preprocessed/sub-amu02/anat/sub-amu02_flip-1_mt-on_space-other_MTS.nii.gz index 3519c1deb6..f96a8ac158 100644 --- a/derivatives/data_preprocessed/sub-amu02/anat/sub-amu02_flip-1_mt-on_space-other_MTS.nii.gz +++ b/derivatives/data_preprocessed/sub-amu02/anat/sub-amu02_flip-1_mt-on_space-other_MTS.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s1337099--51119d8115fc7ec2d3a958592a2e5c3a9c6ec7423c17d1bb46c749781abf9fa1.nii.gz +/annex/objects/SHA256E-s1337068--eac696760fdca682033c43ef291c0fd881fa35dc4b6c1508744b3eab8c8759dd.nii.gz diff --git a/derivatives/data_preprocessed/sub-amu02/anat/sub-amu02_flip-2_mt-off_space-other_MTS.nii.gz b/derivatives/data_preprocessed/sub-amu02/anat/sub-amu02_flip-2_mt-off_space-other_MTS.nii.gz index 6fcbc08304..e233637977 100644 --- a/derivatives/data_preprocessed/sub-amu02/anat/sub-amu02_flip-2_mt-off_space-other_MTS.nii.gz +++ b/derivatives/data_preprocessed/sub-amu02/anat/sub-amu02_flip-2_mt-off_space-other_MTS.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s1387360--eddf6c452e79863c57c979722235801317780496af8a45d4d773dc3485102224.nii.gz +/annex/objects/SHA256E-s1387325--46b8534be1d68028259a3283239fce1145239190cb1ec4d46949c06bedcc4fa7.nii.gz diff --git a/derivatives/data_preprocessed/sub-amu02/anat/sub-amu02_space-other_T1w.nii.gz b/derivatives/data_preprocessed/sub-amu02/anat/sub-amu02_space-other_T1w.nii.gz index 75f15597a0..2697f14b72 100644 --- a/derivatives/data_preprocessed/sub-amu02/anat/sub-amu02_space-other_T1w.nii.gz +++ b/derivatives/data_preprocessed/sub-amu02/anat/sub-amu02_space-other_T1w.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s23920438--f98a5eaf03ba798c10ccbcead716b268aa8f5e21d40003177a3f20da91054f3f.nii.gz +/annex/objects/SHA256E-s23920410--bbde63a1f23b0e84c1bf259e1bc07a3c27b23dd06eadd2440a05c2b78597764a.nii.gz diff --git a/derivatives/data_preprocessed/sub-amu02/anat/sub-amu02_space-other_T2star.nii.gz b/derivatives/data_preprocessed/sub-amu02/anat/sub-amu02_space-other_T2star.nii.gz index 003dd27672..ef726d237b 100644 --- a/derivatives/data_preprocessed/sub-amu02/anat/sub-amu02_space-other_T2star.nii.gz +++ b/derivatives/data_preprocessed/sub-amu02/anat/sub-amu02_space-other_T2star.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s4744483--a3f62d799082fdb11cf3e1ac935a0d83121c392667f7d87112197fd37a5ed8c8.nii.gz +/annex/objects/SHA256E-s4744451--fd246720b3f12da994fda09bfdfda87a228f08605bba8ee4aa4080497cfc31e5.nii.gz diff --git a/derivatives/data_preprocessed/sub-amu02/anat/sub-amu02_space-other_T2w.nii.gz b/derivatives/data_preprocessed/sub-amu02/anat/sub-amu02_space-other_T2w.nii.gz index 9ce011108c..fd85d1bc9a 100644 --- a/derivatives/data_preprocessed/sub-amu02/anat/sub-amu02_space-other_T2w.nii.gz +++ b/derivatives/data_preprocessed/sub-amu02/anat/sub-amu02_space-other_T2w.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s9260154--7075fc58f83639dc1a179552b19439f06c4f358dd4393bf3ed8d9025f4cea1f3.nii.gz +/annex/objects/SHA256E-s9260126--62e89648fffcefa185ea9b88e5a2456023cb3b6154278c5e619d9401f4be6ceb.nii.gz diff --git a/derivatives/data_preprocessed/sub-amu02/dwi/sub-amu02_rec-average_dwi.nii.gz b/derivatives/data_preprocessed/sub-amu02/dwi/sub-amu02_rec-average_dwi.nii.gz index 2e63fe6f0c..5926beaeb7 100644 --- a/derivatives/data_preprocessed/sub-amu02/dwi/sub-amu02_rec-average_dwi.nii.gz +++ b/derivatives/data_preprocessed/sub-amu02/dwi/sub-amu02_rec-average_dwi.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s1040604--33804d441f6bac30782a53b39973ec890a79522fb72c2f4a39d169aa2baf3e3e.nii.gz 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a/derivatives/data_preprocessed/sub-amu03/anat/sub-amu03_flip-2_mt-off_space-other_MTS.nii.gz +++ b/derivatives/data_preprocessed/sub-amu03/anat/sub-amu03_flip-2_mt-off_space-other_MTS.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s1401634--6f76bd47225830caa739dca3640c025006530e9981c565dabd5c4f699ec7c5e4.nii.gz +/annex/objects/SHA256E-s1401602--fdd4a06167ae7308be9a08af92e630919007cd3d57348a6eeac9818ee3e6ac86.nii.gz diff --git a/derivatives/data_preprocessed/sub-amu03/anat/sub-amu03_space-other_T1w.nii.gz b/derivatives/data_preprocessed/sub-amu03/anat/sub-amu03_space-other_T1w.nii.gz index 26bb70cd2c..85c135dff2 100644 --- a/derivatives/data_preprocessed/sub-amu03/anat/sub-amu03_space-other_T1w.nii.gz +++ b/derivatives/data_preprocessed/sub-amu03/anat/sub-amu03_space-other_T1w.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s45866481--67c7b2169c212fb14f53166cd4e1b04f79c9a4d6211598c712bbd72d08aac425.nii.gz 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a/derivatives/data_preprocessed/sub-amu03/anat/sub-amu03_space-other_T2w.nii.gz +++ b/derivatives/data_preprocessed/sub-amu03/anat/sub-amu03_space-other_T2w.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s12582048--a24799ff67def819cdc8783663604347f7c6b28f8defabcbf30b0e682aa08b12.nii.gz +/annex/objects/SHA256E-s12582020--4d3d36255ad86058b1fdc140ce5d9b0eea2300c763c0e8d1d90ca3ea8b5bcfbc.nii.gz diff --git a/derivatives/data_preprocessed/sub-amu03/dwi/sub-amu03_rec-average_dwi.nii.gz b/derivatives/data_preprocessed/sub-amu03/dwi/sub-amu03_rec-average_dwi.nii.gz index eb65379772..3d0ad4ecd8 100644 --- a/derivatives/data_preprocessed/sub-amu03/dwi/sub-amu03_rec-average_dwi.nii.gz +++ b/derivatives/data_preprocessed/sub-amu03/dwi/sub-amu03_rec-average_dwi.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s1040379--a24af39a1f02d8fc7721a6f631cb60c285a8fccfa65b9bac4701a685dd040252.nii.gz +/annex/objects/SHA256E-s1040349--b16ae46abc4329644836d57990f01ba60b047d45d1ea63a192cab0e532cc0a20.nii.gz diff --git a/derivatives/data_preprocessed/sub-amu04/anat/sub-amu04_flip-1_mt-on_space-other_MTS.nii.gz b/derivatives/data_preprocessed/sub-amu04/anat/sub-amu04_flip-1_mt-on_space-other_MTS.nii.gz index bc47a345a1..223a222a8a 100644 --- a/derivatives/data_preprocessed/sub-amu04/anat/sub-amu04_flip-1_mt-on_space-other_MTS.nii.gz +++ b/derivatives/data_preprocessed/sub-amu04/anat/sub-amu04_flip-1_mt-on_space-other_MTS.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s1172322--1e6e1540e4acdc34d58d7646f7a83e8d329bce5acc22bd492a0326da50124b15.nii.gz +/annex/objects/SHA256E-s1172291--3a6c314173c43460b2c0db72b655b423167d29b2e0b1282dbe347e6d93bfbd15.nii.gz diff --git a/derivatives/data_preprocessed/sub-amu04/anat/sub-amu04_flip-2_mt-off_space-other_MTS.nii.gz b/derivatives/data_preprocessed/sub-amu04/anat/sub-amu04_flip-2_mt-off_space-other_MTS.nii.gz index 4e0da21091..e112c8e382 100644 --- a/derivatives/data_preprocessed/sub-amu04/anat/sub-amu04_flip-2_mt-off_space-other_MTS.nii.gz +++ 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a/derivatives/data_preprocessed/sub-geneva03/anat/sub-geneva03_flip-2_mt-off_space-other_MTS.nii.gz b/derivatives/data_preprocessed/sub-geneva03/anat/sub-geneva03_flip-2_mt-off_space-other_MTS.nii.gz index e40a80880a..c440cc227c 100644 --- a/derivatives/data_preprocessed/sub-geneva03/anat/sub-geneva03_flip-2_mt-off_space-other_MTS.nii.gz +++ b/derivatives/data_preprocessed/sub-geneva03/anat/sub-geneva03_flip-2_mt-off_space-other_MTS.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s1895733--44598357d4fdc7311facecf22720533208c93538b904442bd7f446ad25cadee5.nii.gz +/annex/objects/SHA256E-s1895687--15430e88cac679d37f890448ea9e75b83ba20dc1ef04a4a6f4a1b2114686453d.nii.gz diff --git a/derivatives/data_preprocessed/sub-geneva03/anat/sub-geneva03_space-other_T1w.nii.gz b/derivatives/data_preprocessed/sub-geneva03/anat/sub-geneva03_space-other_T1w.nii.gz index 3d98666652..36c673fcfd 100644 --- a/derivatives/data_preprocessed/sub-geneva03/anat/sub-geneva03_space-other_T1w.nii.gz +++ 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a/derivatives/data_preprocessed/sub-geneva04/anat/sub-geneva04_space-other_T2w.nii.gz b/derivatives/data_preprocessed/sub-geneva04/anat/sub-geneva04_space-other_T2w.nii.gz index 43ed555a2b..bcf673114f 100644 --- a/derivatives/data_preprocessed/sub-geneva04/anat/sub-geneva04_space-other_T2w.nii.gz +++ b/derivatives/data_preprocessed/sub-geneva04/anat/sub-geneva04_space-other_T2w.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s15341323--6a0b374bcc35024e1c90009674e4f46909d9b0ccffc6a5159cdc99af1d0ef38a.nii.gz +/annex/objects/SHA256E-s15341293--271a716f2428dcc7de79d7d7a7bfbe2c6e23e6983456236203797a96a3ab209a.nii.gz diff --git a/derivatives/data_preprocessed/sub-geneva04/dwi/sub-geneva04_rec-average_dwi.nii.gz b/derivatives/data_preprocessed/sub-geneva04/dwi/sub-geneva04_rec-average_dwi.nii.gz index 8fbb61b95d..e7e5254608 100644 --- a/derivatives/data_preprocessed/sub-geneva04/dwi/sub-geneva04_rec-average_dwi.nii.gz +++ 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index 2a56623d31..1f66567d37 100644 --- a/derivatives/data_preprocessed/sub-mgh03/anat/sub-mgh03_space-other_T2w.nii.gz +++ b/derivatives/data_preprocessed/sub-mgh03/anat/sub-mgh03_space-other_T2w.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s10831852--28486718f75eb995767edbfecf3469e6c8fe428ee0f2f62b5acf9a7d3811d204.nii.gz +/annex/objects/SHA256E-s10831826--9ab4e163fbfd9c8859053c53dc2eea65160294994aef4df43da8d6a541375f81.nii.gz diff --git a/derivatives/data_preprocessed/sub-mgh03/dwi/sub-mgh03_rec-average_dwi.nii.gz b/derivatives/data_preprocessed/sub-mgh03/dwi/sub-mgh03_rec-average_dwi.nii.gz index 8951338a91..af6b2acaad 100644 --- a/derivatives/data_preprocessed/sub-mgh03/dwi/sub-mgh03_rec-average_dwi.nii.gz +++ b/derivatives/data_preprocessed/sub-mgh03/dwi/sub-mgh03_rec-average_dwi.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s409433--4cd87d3b2efa4177d291e94bfdf562612d3a1478df92f913313a4c0e626de4d9.nii.gz 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e0777af603..ea48ceaf15 100644 --- a/derivatives/data_preprocessed/sub-mountSinai02/anat/sub-mountSinai02_space-other_T2w.nii.gz +++ b/derivatives/data_preprocessed/sub-mountSinai02/anat/sub-mountSinai02_space-other_T2w.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s19331022--6e648bb84f35ef4feba2dc1b149d55cc9d02d54ba4a9c5cd01407ab0810600d5.nii.gz +/annex/objects/SHA256E-s19330987--ab626904a8103707125afe9cf4ba5b28a1232263df63cf7c356b47e2f619f52e.nii.gz diff --git a/derivatives/data_preprocessed/sub-mountSinai02/dwi/sub-mountSinai02_rec-average_dwi.nii.gz b/derivatives/data_preprocessed/sub-mountSinai02/dwi/sub-mountSinai02_rec-average_dwi.nii.gz index 8300e904bf..60c67ab588 100644 --- a/derivatives/data_preprocessed/sub-mountSinai02/dwi/sub-mountSinai02_rec-average_dwi.nii.gz +++ b/derivatives/data_preprocessed/sub-mountSinai02/dwi/sub-mountSinai02_rec-average_dwi.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s407839--89653f22a4166ea8e116768944b537090a5e02d18f161b3a51362968ef53aee5.nii.gz 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100644 --- a/derivatives/data_preprocessed/sub-mountSinai06/anat/sub-mountSinai06_space-other_T2star.nii.gz +++ b/derivatives/data_preprocessed/sub-mountSinai06/anat/sub-mountSinai06_space-other_T2star.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s4656074--7010f0e15589f7792b7875b76f4ed25b5085f349b4bd0400c0762fc517667325.nii.gz +/annex/objects/SHA256E-s4656032--ec1c065cf34d8bf7bbafd079d51fd86e918c13df19be34d438f7a505ef9ac2b9.nii.gz diff --git a/derivatives/data_preprocessed/sub-mountSinai06/anat/sub-mountSinai06_space-other_T2w.nii.gz b/derivatives/data_preprocessed/sub-mountSinai06/anat/sub-mountSinai06_space-other_T2w.nii.gz index da3a46cf7d..103f8d15bc 100644 --- a/derivatives/data_preprocessed/sub-mountSinai06/anat/sub-mountSinai06_space-other_T2w.nii.gz +++ b/derivatives/data_preprocessed/sub-mountSinai06/anat/sub-mountSinai06_space-other_T2w.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s17267836--9208cf552d604da0837d85ea449eaca2ba22d7a90ee3b55a33901bcb4e7b9687.nii.gz 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bbb52cfd43..28909cac28 100644 --- a/derivatives/data_preprocessed/sub-mpicbs05/anat/sub-mpicbs05_flip-2_mt-off_space-other_MTS.nii.gz +++ b/derivatives/data_preprocessed/sub-mpicbs05/anat/sub-mpicbs05_flip-2_mt-off_space-other_MTS.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s1362162--b9aa8911557573f75029557fc092365f13c03fb252c723247198915815853117.nii.gz +/annex/objects/SHA256E-s1362100--ce09fc07b530ebaa3aac7c2795dde6a53a604ea5bfd981d612d216300979e8a7.nii.gz diff --git a/derivatives/data_preprocessed/sub-mpicbs05/anat/sub-mpicbs05_space-other_T1w.nii.gz b/derivatives/data_preprocessed/sub-mpicbs05/anat/sub-mpicbs05_space-other_T1w.nii.gz index e139168f28..513a5886e9 100644 --- a/derivatives/data_preprocessed/sub-mpicbs05/anat/sub-mpicbs05_space-other_T1w.nii.gz +++ b/derivatives/data_preprocessed/sub-mpicbs05/anat/sub-mpicbs05_space-other_T1w.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s18770884--c7acc777e5ef7b37830cc72907455261048acf9678bad9560910d6e80644e9e8.nii.gz 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index 6b22e06b1b..3d6635bf95 100644 --- a/derivatives/data_preprocessed/sub-unf02/anat/sub-unf02_space-other_T2w.nii.gz +++ b/derivatives/data_preprocessed/sub-unf02/anat/sub-unf02_space-other_T2w.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s12445887--b3c3cb6654d3217b53d1db623f19f3d2660f06d7975d39206fc020f36340cb2d.nii.gz +/annex/objects/SHA256E-s12445859--dd555a2dc463f234aba77e8f7ef52a30f6894869f6a2ec5f0abe2d9a53597722.nii.gz diff --git a/derivatives/data_preprocessed/sub-unf02/dwi/sub-unf02_rec-average_dwi.nii.gz b/derivatives/data_preprocessed/sub-unf02/dwi/sub-unf02_rec-average_dwi.nii.gz index acff4011a4..50cf7768a0 100644 --- a/derivatives/data_preprocessed/sub-unf02/dwi/sub-unf02_rec-average_dwi.nii.gz +++ b/derivatives/data_preprocessed/sub-unf02/dwi/sub-unf02_rec-average_dwi.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s387535--6a3d414699e58a7207a0c8aa0cef186079f226ef60d6f37464f931e9f4847bc4.nii.gz 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244ec2ae7b..cd643ffb18 100644 --- a/derivatives/labels_softseg/sub-barcelona01/anat/sub-barcelona01_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz +++ b/derivatives/labels_softseg/sub-barcelona01/anat/sub-barcelona01_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s35773--e67288cd7f2b364e56db6a875d8e19c5f8559e4de109f69cdafbd34c92bfa5f5.nii.gz +/annex/objects/SHA256E-s35775--49a3aebee2130c36ebd9ebf953636d1f2c3904bc0690b51370c8ac975cba6355.nii.gz diff --git a/derivatives/labels_softseg/sub-barcelona01/anat/sub-barcelona01_space-other_T1w_label-SC_softseg.nii.gz b/derivatives/labels_softseg/sub-barcelona01/anat/sub-barcelona01_space-other_T1w_label-SC_softseg.nii.gz index adee35a11d..003dfd641a 100644 --- a/derivatives/labels_softseg/sub-barcelona01/anat/sub-barcelona01_space-other_T1w_label-SC_softseg.nii.gz +++ b/derivatives/labels_softseg/sub-barcelona01/anat/sub-barcelona01_space-other_T1w_label-SC_softseg.nii.gz @@ -1 +1 @@ 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a/derivatives/labels_softseg/sub-barcelona05/dwi/sub-barcelona05_rec-average_dwi_label-SC_softseg.nii.gz +++ b/derivatives/labels_softseg/sub-barcelona05/dwi/sub-barcelona05_rec-average_dwi_label-SC_softseg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s9446--36246c1612f49bfd2db16103adc70d481d5f0ad2cd2f212533cb7204d2cdc10f.nii.gz +/annex/objects/SHA256E-s9404--0b68bdf9add37256131560a690d15162ffbcc5fa5cc18847e45f49dad7c4f387.nii.gz diff --git a/derivatives/labels_softseg/sub-barcelona06/anat/sub-barcelona06_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz b/derivatives/labels_softseg/sub-barcelona06/anat/sub-barcelona06_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz index 0c940ddb1c..dd71f636e6 100644 --- a/derivatives/labels_softseg/sub-barcelona06/anat/sub-barcelona06_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz +++ b/derivatives/labels_softseg/sub-barcelona06/anat/sub-barcelona06_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s37374--cbf42a745ddbec75435367f45c8e52c418e86ee006f77d859c7a178c75448b5d.nii.gz +/annex/objects/SHA256E-s37366--2dc5a77e0fa3f84688d76d9793cecdca463126a3307ae8b18be2660214cf72c8.nii.gz diff --git a/derivatives/labels_softseg/sub-barcelona06/anat/sub-barcelona06_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz b/derivatives/labels_softseg/sub-barcelona06/anat/sub-barcelona06_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz index 0ec8427434..83390586fb 100644 --- a/derivatives/labels_softseg/sub-barcelona06/anat/sub-barcelona06_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz +++ b/derivatives/labels_softseg/sub-barcelona06/anat/sub-barcelona06_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s36196--626bc5b22a6136f129626e8a50df3bae652941b4da2e57f60be0ca60978c30c3.nii.gz +/annex/objects/SHA256E-s36174--f00e8c58dcf4530c099488ea8cedf517ca7655b217d2d15870e0eaf0d64df247.nii.gz diff --git a/derivatives/labels_softseg/sub-barcelona06/anat/sub-barcelona06_space-other_T1w_label-SC_softseg.nii.gz b/derivatives/labels_softseg/sub-barcelona06/anat/sub-barcelona06_space-other_T1w_label-SC_softseg.nii.gz index 4cd8db458a..92f8c1f749 100644 --- a/derivatives/labels_softseg/sub-barcelona06/anat/sub-barcelona06_space-other_T1w_label-SC_softseg.nii.gz +++ b/derivatives/labels_softseg/sub-barcelona06/anat/sub-barcelona06_space-other_T1w_label-SC_softseg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s376408--28b7df5f1eba0d7cd5fa529193093aba15d3a8858159afc49d8c84da831aaa27.nii.gz +/annex/objects/SHA256E-s376373--3b6ceeab9c969e39220c37b6fc96b8589b4f755dfebdb87f70b0e8a54d3b4120.nii.gz diff --git a/derivatives/labels_softseg/sub-barcelona06/anat/sub-barcelona06_space-other_T2star_label-SC_softseg.nii.gz b/derivatives/labels_softseg/sub-barcelona06/anat/sub-barcelona06_space-other_T2star_label-SC_softseg.nii.gz index fa029fe991..7d59e42a0c 100644 --- a/derivatives/labels_softseg/sub-barcelona06/anat/sub-barcelona06_space-other_T2star_label-SC_softseg.nii.gz +++ b/derivatives/labels_softseg/sub-barcelona06/anat/sub-barcelona06_space-other_T2star_label-SC_softseg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s83108--db660ea11a7216b2536973844d1acf73912881090132728988c3809e7ac3d80a.nii.gz +/annex/objects/SHA256E-s83052--0b522cae0f3f76efc49f16db0af5d86db09607e29ddad937911e80dce376115c.nii.gz diff --git a/derivatives/labels_softseg/sub-barcelona06/anat/sub-barcelona06_space-other_T2w_label-SC_softseg.nii.gz b/derivatives/labels_softseg/sub-barcelona06/anat/sub-barcelona06_space-other_T2w_label-SC_softseg.nii.gz index 62372c72b7..84d4bacd1c 100644 --- a/derivatives/labels_softseg/sub-barcelona06/anat/sub-barcelona06_space-other_T2w_label-SC_softseg.nii.gz +++ b/derivatives/labels_softseg/sub-barcelona06/anat/sub-barcelona06_space-other_T2w_label-SC_softseg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s197641--020154c1ee217b5b9670c41616b5a156fc036b2fd719c61f8b52ad2ffa5b74dd.nii.gz +/annex/objects/SHA256E-s197611--e45e07b90c603411e4dcc42d38cf9897d3d7cc04c6016b34e852dea60b29552f.nii.gz diff --git a/derivatives/labels_softseg/sub-barcelona06/dwi/sub-barcelona06_rec-average_dwi_label-SC_softseg.nii.gz b/derivatives/labels_softseg/sub-barcelona06/dwi/sub-barcelona06_rec-average_dwi_label-SC_softseg.nii.gz index 1d65437c6b..5e453a6e5b 100644 --- a/derivatives/labels_softseg/sub-barcelona06/dwi/sub-barcelona06_rec-average_dwi_label-SC_softseg.nii.gz +++ b/derivatives/labels_softseg/sub-barcelona06/dwi/sub-barcelona06_rec-average_dwi_label-SC_softseg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s10061--3e2127f490da23315f72c12a68cd4375fb2c39893771b297d991803aa0d195fe.nii.gz +/annex/objects/SHA256E-s10018--387c2b19e91827ed799b79c9e1a64c2e66441c6fc1edb6c2d2dd6eae971cc8c2.nii.gz diff --git a/derivatives/labels_softseg/sub-beijingGE01/anat/sub-beijingGE01_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-beijingGE01/anat/sub-beijingGE01_space-other_T1w_label-SC_softseg.json deleted file mode 100644 index a2b67812c1..0000000000 --- a/derivatives/labels_softseg/sub-beijingGE01/anat/sub-beijingGE01_space-other_T1w_label-SC_softseg.json +++ /dev/null @@ -1,8 +0,0 @@ -{ - "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:03", - "SpatialReference": { - "Resampling": "1x1x1", - "Reorientation": "RPI" - } -} \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-beijingGE01/anat/sub-beijingGE01_space-other_T1w_label-SC_softseg.nii.gz b/derivatives/labels_softseg/sub-beijingGE01/anat/sub-beijingGE01_space-other_T1w_label-SC_softseg.nii.gz deleted file mode 100644 index fc7ad40e7e..0000000000 --- a/derivatives/labels_softseg/sub-beijingGE01/anat/sub-beijingGE01_space-other_T1w_label-SC_softseg.nii.gz +++ /dev/null @@ -1 +0,0 @@ -/annex/objects/SHA256E-s407065--24158b0bf8c51208de6a55733985d9296ace1a6ab230359886d090546611ef96.nii.gz diff --git a/derivatives/labels_softseg/sub-beijingGE01/anat/sub-beijingGE01_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-beijingGE01/anat/sub-beijingGE01_space-other_T2star_label-SC_softseg.json deleted file mode 100644 index a2a1441fab..0000000000 --- a/derivatives/labels_softseg/sub-beijingGE01/anat/sub-beijingGE01_space-other_T2star_label-SC_softseg.json +++ /dev/null @@ -1,8 +0,0 @@ -{ - "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:03", - "SpatialReference": { - "Reorientation": "RPI", - "Other": "root-mean square across 4th dimension (if it exists)" - } -} \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-beijingGE01/anat/sub-beijingGE01_space-other_T2star_label-SC_softseg.nii.gz b/derivatives/labels_softseg/sub-beijingGE01/anat/sub-beijingGE01_space-other_T2star_label-SC_softseg.nii.gz deleted file mode 100644 index b8a7bbface..0000000000 --- a/derivatives/labels_softseg/sub-beijingGE01/anat/sub-beijingGE01_space-other_T2star_label-SC_softseg.nii.gz +++ /dev/null @@ -1 +0,0 @@ -/annex/objects/SHA256E-s107672--bc0588ee41c6692d82b012ea1f60788467c31583f1363b195b9ff394cf374f9b.nii.gz diff --git a/derivatives/labels_softseg/sub-beijingGE01/anat/sub-beijingGE01_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-beijingGE01/anat/sub-beijingGE01_space-other_T2w_label-SC_softseg.json deleted file mode 100644 index 05d4b3f325..0000000000 --- a/derivatives/labels_softseg/sub-beijingGE01/anat/sub-beijingGE01_space-other_T2w_label-SC_softseg.json +++ /dev/null @@ -1,8 +0,0 @@ -{ - "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:03", - "SpatialReference": { - "Resampling": "0.8x0.8x0.8", - "Reorientation": "RPI" - } -} \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-beijingGE01/anat/sub-beijingGE01_space-other_T2w_label-SC_softseg.nii.gz b/derivatives/labels_softseg/sub-beijingGE01/anat/sub-beijingGE01_space-other_T2w_label-SC_softseg.nii.gz deleted file mode 100644 index 2e56dd168c..0000000000 --- a/derivatives/labels_softseg/sub-beijingGE01/anat/sub-beijingGE01_space-other_T2w_label-SC_softseg.nii.gz +++ /dev/null @@ -1 +0,0 @@ -/annex/objects/SHA256E-s179544--ff8ea1010606692f3e1c81bb98705c9cae664d368cfb87a2eff07c9cacc5dc42.nii.gz diff --git a/derivatives/labels_softseg/sub-beijingGE01/dwi/sub-beijingGE01_rec-average_dwi_label-SC_softseg.json b/derivatives/labels_softseg/sub-beijingGE01/dwi/sub-beijingGE01_rec-average_dwi_label-SC_softseg.json deleted file mode 100644 index d1b0b64203..0000000000 --- a/derivatives/labels_softseg/sub-beijingGE01/dwi/sub-beijingGE01_rec-average_dwi_label-SC_softseg.json +++ /dev/null @@ -1,4 +0,0 @@ -{ - "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:03" -} \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-beijingGE01/dwi/sub-beijingGE01_rec-average_dwi_label-SC_softseg.nii.gz b/derivatives/labels_softseg/sub-beijingGE01/dwi/sub-beijingGE01_rec-average_dwi_label-SC_softseg.nii.gz deleted file mode 100644 index c4af2e0e9f..0000000000 --- a/derivatives/labels_softseg/sub-beijingGE01/dwi/sub-beijingGE01_rec-average_dwi_label-SC_softseg.nii.gz +++ /dev/null @@ -1 +0,0 @@ -/annex/objects/SHA256E-s72094--7c2698fe9536e0b076e94c6438118c3204ce3dfe7d210849e4d0cc9a94e99bc7.nii.gz diff --git a/derivatives/labels_softseg/sub-beijingGE02/anat/sub-beijingGE02_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-beijingGE02/anat/sub-beijingGE02_space-other_T1w_label-SC_softseg.json deleted file mode 100644 index a2b67812c1..0000000000 --- a/derivatives/labels_softseg/sub-beijingGE02/anat/sub-beijingGE02_space-other_T1w_label-SC_softseg.json +++ /dev/null @@ -1,8 +0,0 @@ -{ - "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:03", - "SpatialReference": { - "Resampling": "1x1x1", - "Reorientation": "RPI" - } -} \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-beijingGE02/anat/sub-beijingGE02_space-other_T1w_label-SC_softseg.nii.gz b/derivatives/labels_softseg/sub-beijingGE02/anat/sub-beijingGE02_space-other_T1w_label-SC_softseg.nii.gz deleted file mode 100644 index e22e03710b..0000000000 --- a/derivatives/labels_softseg/sub-beijingGE02/anat/sub-beijingGE02_space-other_T1w_label-SC_softseg.nii.gz +++ /dev/null @@ -1 +0,0 @@ -/annex/objects/SHA256E-s402181--f04612ee8efa4aec03e54f91ba8063fbde49c79b917d8a9ae3443e5612451b06.nii.gz diff --git a/derivatives/labels_softseg/sub-beijingGE02/anat/sub-beijingGE02_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-beijingGE02/anat/sub-beijingGE02_space-other_T2star_label-SC_softseg.json deleted file mode 100644 index a2a1441fab..0000000000 --- a/derivatives/labels_softseg/sub-beijingGE02/anat/sub-beijingGE02_space-other_T2star_label-SC_softseg.json +++ /dev/null @@ -1,8 +0,0 @@ -{ - "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:03", - "SpatialReference": { - "Reorientation": "RPI", - "Other": "root-mean square across 4th dimension (if it exists)" - } -} \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-beijingGE02/anat/sub-beijingGE02_space-other_T2star_label-SC_softseg.nii.gz b/derivatives/labels_softseg/sub-beijingGE02/anat/sub-beijingGE02_space-other_T2star_label-SC_softseg.nii.gz deleted file mode 100644 index e34fef2bba..0000000000 --- a/derivatives/labels_softseg/sub-beijingGE02/anat/sub-beijingGE02_space-other_T2star_label-SC_softseg.nii.gz +++ /dev/null @@ -1 +0,0 @@ -/annex/objects/SHA256E-s99990--d997c43c582ae5da58af98e88a72db6b614f4a9a9dfc772dcc946be48b493c86.nii.gz diff --git a/derivatives/labels_softseg/sub-beijingGE02/anat/sub-beijingGE02_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-beijingGE02/anat/sub-beijingGE02_space-other_T2w_label-SC_softseg.json deleted file mode 100644 index 05d4b3f325..0000000000 --- a/derivatives/labels_softseg/sub-beijingGE02/anat/sub-beijingGE02_space-other_T2w_label-SC_softseg.json +++ /dev/null @@ -1,8 +0,0 @@ -{ - "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:03", - "SpatialReference": { - "Resampling": "0.8x0.8x0.8", - "Reorientation": "RPI" - } -} \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-beijingGE02/anat/sub-beijingGE02_space-other_T2w_label-SC_softseg.nii.gz b/derivatives/labels_softseg/sub-beijingGE02/anat/sub-beijingGE02_space-other_T2w_label-SC_softseg.nii.gz deleted file mode 100644 index 6b990eda6f..0000000000 --- a/derivatives/labels_softseg/sub-beijingGE02/anat/sub-beijingGE02_space-other_T2w_label-SC_softseg.nii.gz +++ /dev/null @@ -1 +0,0 @@ -/annex/objects/SHA256E-s155536--5ff4a9e4d3f7b7e01115c60e14be366b712162aa9003e10991b772de3d6e1ecf.nii.gz diff --git a/derivatives/labels_softseg/sub-beijingGE02/dwi/sub-beijingGE02_rec-average_dwi_label-SC_softseg.json b/derivatives/labels_softseg/sub-beijingGE02/dwi/sub-beijingGE02_rec-average_dwi_label-SC_softseg.json deleted file mode 100644 index c0903d718d..0000000000 --- a/derivatives/labels_softseg/sub-beijingGE02/dwi/sub-beijingGE02_rec-average_dwi_label-SC_softseg.json +++ /dev/null @@ -1,4 +0,0 @@ -{ - "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:04" -} \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-beijingGE02/dwi/sub-beijingGE02_rec-average_dwi_label-SC_softseg.nii.gz b/derivatives/labels_softseg/sub-beijingGE02/dwi/sub-beijingGE02_rec-average_dwi_label-SC_softseg.nii.gz deleted file mode 100644 index b2946801e9..0000000000 --- a/derivatives/labels_softseg/sub-beijingGE02/dwi/sub-beijingGE02_rec-average_dwi_label-SC_softseg.nii.gz +++ /dev/null @@ -1 +0,0 @@ -/annex/objects/SHA256E-s67236--54c3ff1ee7e8d8b1c1c2d6ad2a82004eb68ee0ab5b2de2e684bddcafcdfde247.nii.gz diff --git a/derivatives/labels_softseg/sub-beijingGE03/anat/sub-beijingGE03_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-beijingGE03/anat/sub-beijingGE03_space-other_T1w_label-SC_softseg.json deleted file mode 100644 index 7370fccd52..0000000000 --- a/derivatives/labels_softseg/sub-beijingGE03/anat/sub-beijingGE03_space-other_T1w_label-SC_softseg.json +++ /dev/null @@ -1,8 +0,0 @@ -{ - "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:04", - "SpatialReference": { - "Resampling": "1x1x1", - "Reorientation": "RPI" - } -} \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-beijingGE03/anat/sub-beijingGE03_space-other_T1w_label-SC_softseg.nii.gz b/derivatives/labels_softseg/sub-beijingGE03/anat/sub-beijingGE03_space-other_T1w_label-SC_softseg.nii.gz deleted file mode 100644 index fb97d39355..0000000000 --- a/derivatives/labels_softseg/sub-beijingGE03/anat/sub-beijingGE03_space-other_T1w_label-SC_softseg.nii.gz +++ /dev/null @@ -1 +0,0 @@ -/annex/objects/SHA256E-s405795--6dc4e3b915ff896fb7e90fd562fc16077dd3ea3345ec5308068d2dc2d2e794d9.nii.gz diff --git a/derivatives/labels_softseg/sub-beijingGE03/anat/sub-beijingGE03_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-beijingGE03/anat/sub-beijingGE03_space-other_T2star_label-SC_softseg.json deleted file mode 100644 index 078a8d963d..0000000000 --- a/derivatives/labels_softseg/sub-beijingGE03/anat/sub-beijingGE03_space-other_T2star_label-SC_softseg.json +++ /dev/null @@ -1,8 +0,0 @@ -{ - "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:04", - "SpatialReference": { - "Reorientation": "RPI", - "Other": "root-mean square across 4th dimension (if it exists)" - } -} \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-beijingGE03/anat/sub-beijingGE03_space-other_T2star_label-SC_softseg.nii.gz b/derivatives/labels_softseg/sub-beijingGE03/anat/sub-beijingGE03_space-other_T2star_label-SC_softseg.nii.gz deleted file mode 100644 index d4149b1bb7..0000000000 --- a/derivatives/labels_softseg/sub-beijingGE03/anat/sub-beijingGE03_space-other_T2star_label-SC_softseg.nii.gz +++ /dev/null @@ -1 +0,0 @@ -/annex/objects/SHA256E-s103003--88aa5938a967aab6ca7e119427b5651ef3789caf5b628e6911bc65592dac42fd.nii.gz diff --git a/derivatives/labels_softseg/sub-beijingGE03/anat/sub-beijingGE03_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-beijingGE03/anat/sub-beijingGE03_space-other_T2w_label-SC_softseg.json deleted file mode 100644 index c897218fac..0000000000 --- a/derivatives/labels_softseg/sub-beijingGE03/anat/sub-beijingGE03_space-other_T2w_label-SC_softseg.json +++ /dev/null @@ -1,8 +0,0 @@ -{ - "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:04", - "SpatialReference": { - "Resampling": "0.8x0.8x0.8", - "Reorientation": "RPI" - } -} \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-beijingGE03/anat/sub-beijingGE03_space-other_T2w_label-SC_softseg.nii.gz b/derivatives/labels_softseg/sub-beijingGE03/anat/sub-beijingGE03_space-other_T2w_label-SC_softseg.nii.gz deleted file mode 100644 index 2fab0be025..0000000000 --- a/derivatives/labels_softseg/sub-beijingGE03/anat/sub-beijingGE03_space-other_T2w_label-SC_softseg.nii.gz +++ /dev/null @@ -1 +0,0 @@ -/annex/objects/SHA256E-s173248--c27b6a372846942c11838c1226d6ea963452727e5d3078d0d98d223e783ec907.nii.gz diff --git a/derivatives/labels_softseg/sub-beijingGE03/dwi/sub-beijingGE03_rec-average_dwi_label-SC_softseg.json b/derivatives/labels_softseg/sub-beijingGE03/dwi/sub-beijingGE03_rec-average_dwi_label-SC_softseg.json deleted file mode 100644 index c0903d718d..0000000000 --- a/derivatives/labels_softseg/sub-beijingGE03/dwi/sub-beijingGE03_rec-average_dwi_label-SC_softseg.json +++ /dev/null @@ -1,4 +0,0 @@ -{ - "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:04" -} \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-beijingGE03/dwi/sub-beijingGE03_rec-average_dwi_label-SC_softseg.nii.gz b/derivatives/labels_softseg/sub-beijingGE03/dwi/sub-beijingGE03_rec-average_dwi_label-SC_softseg.nii.gz deleted file mode 100644 index 617b400149..0000000000 --- a/derivatives/labels_softseg/sub-beijingGE03/dwi/sub-beijingGE03_rec-average_dwi_label-SC_softseg.nii.gz +++ /dev/null @@ -1 +0,0 @@ -/annex/objects/SHA256E-s71347--8f5683dcd26e0b84c38ac94d68f52566fa742fa3c43470297d419bd2fef17b93.nii.gz diff --git a/derivatives/labels_softseg/sub-beijingGE04/anat/sub-beijingGE04_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-beijingGE04/anat/sub-beijingGE04_space-other_T1w_label-SC_softseg.json deleted file mode 100644 index 7370fccd52..0000000000 --- a/derivatives/labels_softseg/sub-beijingGE04/anat/sub-beijingGE04_space-other_T1w_label-SC_softseg.json +++ /dev/null @@ -1,8 +0,0 @@ -{ - "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:04", - "SpatialReference": { - "Resampling": "1x1x1", - "Reorientation": "RPI" - } -} \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-beijingGE04/anat/sub-beijingGE04_space-other_T1w_label-SC_softseg.nii.gz b/derivatives/labels_softseg/sub-beijingGE04/anat/sub-beijingGE04_space-other_T1w_label-SC_softseg.nii.gz deleted file mode 100644 index 280cc56cc9..0000000000 --- a/derivatives/labels_softseg/sub-beijingGE04/anat/sub-beijingGE04_space-other_T1w_label-SC_softseg.nii.gz +++ /dev/null @@ -1 +0,0 @@ -/annex/objects/SHA256E-s404327--b90ec6103c7fb7c56c3175ea3595bd70366b30b6aaa2f2d539bd6ab1ac50243b.nii.gz diff --git a/derivatives/labels_softseg/sub-beijingGE04/anat/sub-beijingGE04_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-beijingGE04/anat/sub-beijingGE04_space-other_T2star_label-SC_softseg.json deleted file mode 100644 index 078a8d963d..0000000000 --- a/derivatives/labels_softseg/sub-beijingGE04/anat/sub-beijingGE04_space-other_T2star_label-SC_softseg.json +++ /dev/null @@ -1,8 +0,0 @@ -{ - "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:04", - "SpatialReference": { - "Reorientation": "RPI", - "Other": "root-mean square across 4th dimension (if it exists)" - } -} \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-beijingGE04/anat/sub-beijingGE04_space-other_T2star_label-SC_softseg.nii.gz b/derivatives/labels_softseg/sub-beijingGE04/anat/sub-beijingGE04_space-other_T2star_label-SC_softseg.nii.gz deleted file mode 100644 index 30cec57fcc..0000000000 --- a/derivatives/labels_softseg/sub-beijingGE04/anat/sub-beijingGE04_space-other_T2star_label-SC_softseg.nii.gz +++ /dev/null @@ -1 +0,0 @@ -/annex/objects/SHA256E-s103920--027b81c73a6c4bd935958329f770e93f0e415c033b08e6e886fcbc7d59ba2367.nii.gz diff --git a/derivatives/labels_softseg/sub-beijingGE04/anat/sub-beijingGE04_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-beijingGE04/anat/sub-beijingGE04_space-other_T2w_label-SC_softseg.json deleted file mode 100644 index c897218fac..0000000000 --- a/derivatives/labels_softseg/sub-beijingGE04/anat/sub-beijingGE04_space-other_T2w_label-SC_softseg.json +++ /dev/null @@ -1,8 +0,0 @@ -{ - "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:04", - "SpatialReference": { - "Resampling": "0.8x0.8x0.8", - "Reorientation": "RPI" - } -} \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-beijingGE04/anat/sub-beijingGE04_space-other_T2w_label-SC_softseg.nii.gz b/derivatives/labels_softseg/sub-beijingGE04/anat/sub-beijingGE04_space-other_T2w_label-SC_softseg.nii.gz deleted file mode 100644 index c0ccbca5f7..0000000000 --- a/derivatives/labels_softseg/sub-beijingGE04/anat/sub-beijingGE04_space-other_T2w_label-SC_softseg.nii.gz +++ /dev/null @@ -1 +0,0 @@ -/annex/objects/SHA256E-s178995--b88f4ec4757ebb0278d44c6a57abfe28f22331a66a179a4586ab972be0d9465d.nii.gz diff --git a/derivatives/labels_softseg/sub-beijingGE04/dwi/sub-beijingGE04_rec-average_dwi_label-SC_softseg.json b/derivatives/labels_softseg/sub-beijingGE04/dwi/sub-beijingGE04_rec-average_dwi_label-SC_softseg.json deleted file mode 100644 index c0903d718d..0000000000 --- a/derivatives/labels_softseg/sub-beijingGE04/dwi/sub-beijingGE04_rec-average_dwi_label-SC_softseg.json +++ /dev/null @@ -1,4 +0,0 @@ -{ - "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:04" -} \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-beijingGE04/dwi/sub-beijingGE04_rec-average_dwi_label-SC_softseg.nii.gz b/derivatives/labels_softseg/sub-beijingGE04/dwi/sub-beijingGE04_rec-average_dwi_label-SC_softseg.nii.gz deleted file mode 100644 index 33e1b04b6b..0000000000 --- a/derivatives/labels_softseg/sub-beijingGE04/dwi/sub-beijingGE04_rec-average_dwi_label-SC_softseg.nii.gz +++ /dev/null @@ -1 +0,0 @@ -/annex/objects/SHA256E-s71699--f0ce647c621bbe5ae6c48d5cd1cd518593057b1c7fecfdde2589db19dfbc10d7.nii.gz diff --git a/derivatives/labels_softseg/sub-beijingPrisma01/anat/sub-beijingPrisma01_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz b/derivatives/labels_softseg/sub-beijingPrisma01/anat/sub-beijingPrisma01_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz index 218404b1f9..1bba264f65 100644 --- a/derivatives/labels_softseg/sub-beijingPrisma01/anat/sub-beijingPrisma01_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz +++ b/derivatives/labels_softseg/sub-beijingPrisma01/anat/sub-beijingPrisma01_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s37483--0baf5cb168d21e7d1f6e4d65823bc392f7b1e976a8e307ebf3f1820c2ba288be.nii.gz +/annex/objects/SHA256E-s37438--2c48add58164c265a245e7adb4b3e6baac550ee6388fbbfb2d5ccf0d776cbfc1.nii.gz diff --git a/derivatives/labels_softseg/sub-beijingPrisma01/anat/sub-beijingPrisma01_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz b/derivatives/labels_softseg/sub-beijingPrisma01/anat/sub-beijingPrisma01_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz index 64b3145100..dc426d3786 100644 --- a/derivatives/labels_softseg/sub-beijingPrisma01/anat/sub-beijingPrisma01_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz +++ b/derivatives/labels_softseg/sub-beijingPrisma01/anat/sub-beijingPrisma01_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s37484--76728667d4cd98e9718cd3e38d51881592d8f343426cc59736768962ace421be.nii.gz +/annex/objects/SHA256E-s37364--51a253693cd313a58f1ab1ebf191c589327c86bf0e8c92886edbc620635cd703.nii.gz diff --git a/derivatives/labels_softseg/sub-beijingPrisma01/anat/sub-beijingPrisma01_space-other_T1w_label-SC_softseg.nii.gz b/derivatives/labels_softseg/sub-beijingPrisma01/anat/sub-beijingPrisma01_space-other_T1w_label-SC_softseg.nii.gz index dac7ea783b..abb0c26fc6 100644 --- a/derivatives/labels_softseg/sub-beijingPrisma01/anat/sub-beijingPrisma01_space-other_T1w_label-SC_softseg.nii.gz +++ b/derivatives/labels_softseg/sub-beijingPrisma01/anat/sub-beijingPrisma01_space-other_T1w_label-SC_softseg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s367428--782a7ea0f38854796065dac3db67a577f9052518155143262839eebf3fca932a.nii.gz +/annex/objects/SHA256E-s367395--86dac99b5ea7e1ef006549c1c0e78e67ed13d4f03932b6a1dd6a70abbb4b0f22.nii.gz diff --git a/derivatives/labels_softseg/sub-beijingPrisma01/anat/sub-beijingPrisma01_space-other_T2star_label-SC_softseg.nii.gz b/derivatives/labels_softseg/sub-beijingPrisma01/anat/sub-beijingPrisma01_space-other_T2star_label-SC_softseg.nii.gz index 7b1c6c31b0..930f6b64f3 100644 --- a/derivatives/labels_softseg/sub-beijingPrisma01/anat/sub-beijingPrisma01_space-other_T2star_label-SC_softseg.nii.gz +++ b/derivatives/labels_softseg/sub-beijingPrisma01/anat/sub-beijingPrisma01_space-other_T2star_label-SC_softseg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s80854--a15c3e08657c702d8d2b29df62b1421e788b7960bbc52e4b07d93fa1ceebb61e.nii.gz +/annex/objects/SHA256E-s80794--4f479739dcd641827be6dd3c5bd7ea90a8c52883917701702f56f1600e74d392.nii.gz diff --git a/derivatives/labels_softseg/sub-beijingPrisma01/anat/sub-beijingPrisma01_space-other_T2w_label-SC_softseg.nii.gz b/derivatives/labels_softseg/sub-beijingPrisma01/anat/sub-beijingPrisma01_space-other_T2w_label-SC_softseg.nii.gz index 74c0ca7a2e..954568c2f9 100644 --- a/derivatives/labels_softseg/sub-beijingPrisma01/anat/sub-beijingPrisma01_space-other_T2w_label-SC_softseg.nii.gz +++ b/derivatives/labels_softseg/sub-beijingPrisma01/anat/sub-beijingPrisma01_space-other_T2w_label-SC_softseg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s192340--b7b15b7698d4be41dc712a5d6cee3d509fdfb49605276d92259ea9ad01d3d978.nii.gz +/annex/objects/SHA256E-s192307--45ab91da095c5e0866c0a7ffc159dea90c50102d9b149ad6ee7526fd76d966dc.nii.gz diff --git a/derivatives/labels_softseg/sub-beijingPrisma01/dwi/sub-beijingPrisma01_rec-average_dwi_label-SC_softseg.nii.gz b/derivatives/labels_softseg/sub-beijingPrisma01/dwi/sub-beijingPrisma01_rec-average_dwi_label-SC_softseg.nii.gz index 12131e3522..5324f4602a 100644 --- a/derivatives/labels_softseg/sub-beijingPrisma01/dwi/sub-beijingPrisma01_rec-average_dwi_label-SC_softseg.nii.gz +++ b/derivatives/labels_softseg/sub-beijingPrisma01/dwi/sub-beijingPrisma01_rec-average_dwi_label-SC_softseg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s9461--71184426409ac8906bef172dd960567568359b9ea1a39669507260417fbd9ff9.nii.gz +/annex/objects/SHA256E-s9415--e66c26aa006c831716317d5351d19ad5598e6de185e32595d6661ecc70df81e3.nii.gz diff --git a/derivatives/labels_softseg/sub-beijingPrisma02/anat/sub-beijingPrisma02_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz b/derivatives/labels_softseg/sub-beijingPrisma02/anat/sub-beijingPrisma02_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz index 126da7e35c..da90179f2d 100644 --- a/derivatives/labels_softseg/sub-beijingPrisma02/anat/sub-beijingPrisma02_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz +++ b/derivatives/labels_softseg/sub-beijingPrisma02/anat/sub-beijingPrisma02_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s36431--fdb5d27653c5f60df29790614a122e0ed75c026a1c4fc2de94b8ef32d94ba43f.nii.gz +/annex/objects/SHA256E-s36408--88aefeee66755621a7382c3e9c10d28a6acc28f1b32e56e8c365810ee4404d39.nii.gz diff --git a/derivatives/labels_softseg/sub-beijingPrisma02/anat/sub-beijingPrisma02_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz b/derivatives/labels_softseg/sub-beijingPrisma02/anat/sub-beijingPrisma02_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz index a613e0b3ac..db82965f40 100644 --- a/derivatives/labels_softseg/sub-beijingPrisma02/anat/sub-beijingPrisma02_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz +++ b/derivatives/labels_softseg/sub-beijingPrisma02/anat/sub-beijingPrisma02_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s35659--5e775c0b5b186a0e7112d7bbae6725834578c4671f79fef7cafa58d103f4cf94.nii.gz +/annex/objects/SHA256E-s35599--5d33b1f8fe51a0977644e891d696d50392d8f2c900208a7c48ce10ab79709629.nii.gz diff --git a/derivatives/labels_softseg/sub-beijingPrisma02/anat/sub-beijingPrisma02_space-other_T1w_label-SC_softseg.nii.gz b/derivatives/labels_softseg/sub-beijingPrisma02/anat/sub-beijingPrisma02_space-other_T1w_label-SC_softseg.nii.gz index 251495573d..a232384d78 100644 --- a/derivatives/labels_softseg/sub-beijingPrisma02/anat/sub-beijingPrisma02_space-other_T1w_label-SC_softseg.nii.gz +++ b/derivatives/labels_softseg/sub-beijingPrisma02/anat/sub-beijingPrisma02_space-other_T1w_label-SC_softseg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s350619--bbda76e4e1e140dd5b9160422b8c8af44b16cab4589e6a96eff29ebfffc9be0c.nii.gz +/annex/objects/SHA256E-s350584--0cb8f43e48fa035cfc6b0a92884184bfa9bef9d3a5b88d34b8aa3764b4863460.nii.gz diff --git a/derivatives/labels_softseg/sub-beijingPrisma02/anat/sub-beijingPrisma02_space-other_T2star_label-SC_softseg.nii.gz b/derivatives/labels_softseg/sub-beijingPrisma02/anat/sub-beijingPrisma02_space-other_T2star_label-SC_softseg.nii.gz index fd9d33aed1..60a192f44d 100644 --- a/derivatives/labels_softseg/sub-beijingPrisma02/anat/sub-beijingPrisma02_space-other_T2star_label-SC_softseg.nii.gz +++ b/derivatives/labels_softseg/sub-beijingPrisma02/anat/sub-beijingPrisma02_space-other_T2star_label-SC_softseg.nii.gz @@ -1 +1 @@ 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9627042f69..276b65f34a 100644 --- a/derivatives/labels_softseg/sub-beijingPrisma03/anat/sub-beijingPrisma03_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz +++ b/derivatives/labels_softseg/sub-beijingPrisma03/anat/sub-beijingPrisma03_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s40345--d66599bc8c5991c61be8a756001c4ef32988d0f0dcafce29d0c0093e4b45643e.nii.gz +/annex/objects/SHA256E-s40320--bc1ce3ed610eca38314b93d831d8defef74328852d039c49bfad226be880a21f.nii.gz diff --git a/derivatives/labels_softseg/sub-beijingPrisma03/anat/sub-beijingPrisma03_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz b/derivatives/labels_softseg/sub-beijingPrisma03/anat/sub-beijingPrisma03_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz index 7a1709c6c3..b67c6b50dc 100644 --- a/derivatives/labels_softseg/sub-beijingPrisma03/anat/sub-beijingPrisma03_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz +++ b/derivatives/labels_softseg/sub-beijingPrisma03/anat/sub-beijingPrisma03_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s39117--0228d2c0fcdf78d613819458cf23862140a4711fb1ebd39b48471b09e14df19b.nii.gz +/annex/objects/SHA256E-s39087--64dd97c186d5d3a689bb698e983532e2be59e364565d5d0c1de18f79244db389.nii.gz diff --git a/derivatives/labels_softseg/sub-beijingPrisma03/anat/sub-beijingPrisma03_space-other_T1w_label-SC_softseg.nii.gz b/derivatives/labels_softseg/sub-beijingPrisma03/anat/sub-beijingPrisma03_space-other_T1w_label-SC_softseg.nii.gz index e35275360e..6a96cbb4a9 100644 --- a/derivatives/labels_softseg/sub-beijingPrisma03/anat/sub-beijingPrisma03_space-other_T1w_label-SC_softseg.nii.gz +++ b/derivatives/labels_softseg/sub-beijingPrisma03/anat/sub-beijingPrisma03_space-other_T1w_label-SC_softseg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s370300--4337a3957b52df010f0c9551cab7de704fe1b8591cf2a0234910336ad730e407.nii.gz 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+++ b/derivatives/labels_softseg/sub-beijingPrisma03/dwi/sub-beijingPrisma03_rec-average_dwi_label-SC_softseg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s7057--a4aaec299658f48fe4142c8b244f0ca32af2f716d31637ff5c35da37df1b4d52.nii.gz +/annex/objects/SHA256E-s7011--71d95a8ad7e87e698e1eb4402325e19163ed87b6f660ce5147fc83721e0a5208.nii.gz diff --git a/derivatives/labels_softseg/sub-beijingPrisma04/anat/sub-beijingPrisma04_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz b/derivatives/labels_softseg/sub-beijingPrisma04/anat/sub-beijingPrisma04_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz index 4aa2371368..c87665d2a9 100644 --- a/derivatives/labels_softseg/sub-beijingPrisma04/anat/sub-beijingPrisma04_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz +++ b/derivatives/labels_softseg/sub-beijingPrisma04/anat/sub-beijingPrisma04_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz @@ -1 +1 @@ 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--git a/derivatives/labels_softseg/sub-beijingPrisma04/anat/sub-beijingPrisma04_space-other_T1w_label-SC_softseg.nii.gz b/derivatives/labels_softseg/sub-beijingPrisma04/anat/sub-beijingPrisma04_space-other_T1w_label-SC_softseg.nii.gz index db058a08b9..7ce1ced8a8 100644 --- a/derivatives/labels_softseg/sub-beijingPrisma04/anat/sub-beijingPrisma04_space-other_T1w_label-SC_softseg.nii.gz +++ b/derivatives/labels_softseg/sub-beijingPrisma04/anat/sub-beijingPrisma04_space-other_T1w_label-SC_softseg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s266578--b506100f6b1c189d8a108fa31b3a642831cd4c1724369ba3a07635aeb4b83d24.nii.gz +/annex/objects/SHA256E-s266544--294cef080ca68421aaacb056dd5ec52555f1555e7e0797d56adfd3ebd1095f98.nii.gz diff --git a/derivatives/labels_softseg/sub-beijingPrisma04/anat/sub-beijingPrisma04_space-other_T2star_label-SC_softseg.nii.gz b/derivatives/labels_softseg/sub-beijingPrisma04/anat/sub-beijingPrisma04_space-other_T2star_label-SC_softseg.nii.gz index 9b1b0e00c8..1ee6cc51cb 100644 --- a/derivatives/labels_softseg/sub-beijingPrisma04/anat/sub-beijingPrisma04_space-other_T2star_label-SC_softseg.nii.gz +++ b/derivatives/labels_softseg/sub-beijingPrisma04/anat/sub-beijingPrisma04_space-other_T2star_label-SC_softseg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s79853--04d0f18fb5a117345c80bb299246aef38a73f10ff6382cc2a79b63f5aef08698.nii.gz +/annex/objects/SHA256E-s79793--4f2bbf1aa641ccb9b19d2a05e99a47f39d2d962986f448c0cf8b852fb9525193.nii.gz diff --git a/derivatives/labels_softseg/sub-beijingPrisma04/anat/sub-beijingPrisma04_space-other_T2w_label-SC_softseg.nii.gz b/derivatives/labels_softseg/sub-beijingPrisma04/anat/sub-beijingPrisma04_space-other_T2w_label-SC_softseg.nii.gz index 9a2ff860d0..f0d7907c2c 100644 --- a/derivatives/labels_softseg/sub-beijingPrisma04/anat/sub-beijingPrisma04_space-other_T2w_label-SC_softseg.nii.gz +++ b/derivatives/labels_softseg/sub-beijingPrisma04/anat/sub-beijingPrisma04_space-other_T2w_label-SC_softseg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s189157--32280dd9bbe252f11a64a658c1e033e8c396bd8ef0c2e80cfe522ee0f98f3576.nii.gz +/annex/objects/SHA256E-s189124--a0b25214b52719f72685ab66aabf5cd616484359d1a45f7b3370f5e40b1f3aad.nii.gz diff --git a/derivatives/labels_softseg/sub-beijingPrisma04/dwi/sub-beijingPrisma04_rec-average_dwi_label-SC_softseg.nii.gz b/derivatives/labels_softseg/sub-beijingPrisma04/dwi/sub-beijingPrisma04_rec-average_dwi_label-SC_softseg.nii.gz index f3a3540eb5..44311daf18 100644 --- a/derivatives/labels_softseg/sub-beijingPrisma04/dwi/sub-beijingPrisma04_rec-average_dwi_label-SC_softseg.nii.gz +++ b/derivatives/labels_softseg/sub-beijingPrisma04/dwi/sub-beijingPrisma04_rec-average_dwi_label-SC_softseg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s9116--907ef15f3de9bee412f9d131b0dd7960e9ad8d61815a4e4da706085f3017bf44.nii.gz 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b/derivatives/labels_softseg/sub-beijingPrisma05/anat/sub-beijingPrisma05_space-other_T1w_label-SC_softseg.nii.gz index 51527e0a08..a0d086d3ec 100644 --- a/derivatives/labels_softseg/sub-beijingPrisma05/anat/sub-beijingPrisma05_space-other_T1w_label-SC_softseg.nii.gz +++ b/derivatives/labels_softseg/sub-beijingPrisma05/anat/sub-beijingPrisma05_space-other_T1w_label-SC_softseg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s372705--f40032c46915a4e4b13f3896821ca1375bb1aab354579b18622d169954ebf0e1.nii.gz +/annex/objects/SHA256E-s372670--f81ad5e1cc636bd8d60fb9070e5c593ecd8fd69e73f8bc5854f0c6ede7f86361.nii.gz diff --git a/derivatives/labels_softseg/sub-beijingPrisma05/anat/sub-beijingPrisma05_space-other_T2star_label-SC_softseg.nii.gz b/derivatives/labels_softseg/sub-beijingPrisma05/anat/sub-beijingPrisma05_space-other_T2star_label-SC_softseg.nii.gz index fba2f83606..479f17f487 100644 --- a/derivatives/labels_softseg/sub-beijingPrisma05/anat/sub-beijingPrisma05_space-other_T2star_label-SC_softseg.nii.gz +++ b/derivatives/labels_softseg/sub-beijingPrisma05/anat/sub-beijingPrisma05_space-other_T2star_label-SC_softseg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s81538--3061c54da8afc7ed957c17f78b40dab16979b4ff3512f513aed4bc94afa4d30e.nii.gz +/annex/objects/SHA256E-s81477--7a1dcb9d7da1e13cf0d89d9a9d8b7d43df7e51fc67f73d07d16b6befe304af0d.nii.gz diff --git a/derivatives/labels_softseg/sub-beijingPrisma05/anat/sub-beijingPrisma05_space-other_T2w_label-SC_softseg.nii.gz b/derivatives/labels_softseg/sub-beijingPrisma05/anat/sub-beijingPrisma05_space-other_T2w_label-SC_softseg.nii.gz index 783612fbc2..316e7cf3d4 100644 --- a/derivatives/labels_softseg/sub-beijingPrisma05/anat/sub-beijingPrisma05_space-other_T2w_label-SC_softseg.nii.gz +++ b/derivatives/labels_softseg/sub-beijingPrisma05/anat/sub-beijingPrisma05_space-other_T2w_label-SC_softseg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s213506--79e100869bac5feef790bd01ba6642b5aed987333430c7084dec9a3571bb9516.nii.gz +/annex/objects/SHA256E-s213473--b69c0b5f4a9f2294d90e6d259d4563d599e3109803d5712eae58be478a17f30a.nii.gz diff --git a/derivatives/labels_softseg/sub-beijingPrisma05/dwi/sub-beijingPrisma05_rec-average_dwi_label-SC_softseg.nii.gz b/derivatives/labels_softseg/sub-beijingPrisma05/dwi/sub-beijingPrisma05_rec-average_dwi_label-SC_softseg.nii.gz index f84f953f68..4055d380e8 100644 --- a/derivatives/labels_softseg/sub-beijingPrisma05/dwi/sub-beijingPrisma05_rec-average_dwi_label-SC_softseg.nii.gz +++ b/derivatives/labels_softseg/sub-beijingPrisma05/dwi/sub-beijingPrisma05_rec-average_dwi_label-SC_softseg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s9525--0d4af896b0725360c0580c511bac6d234b5fb2fb27172f666fd2b9e5e2896e9e.nii.gz +/annex/objects/SHA256E-s9477--8efcd27011f5c8ca0123a20030a439379a2af159a46577c4304b89a130de9b94.nii.gz diff --git a/derivatives/labels_softseg/sub-beijingVerio01/anat/sub-beijingVerio01_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-beijingVerio01/anat/sub-beijingVerio01_space-other_T1w_label-SC_softseg.json deleted file mode 100644 index bf848061bb..0000000000 --- a/derivatives/labels_softseg/sub-beijingVerio01/anat/sub-beijingVerio01_space-other_T1w_label-SC_softseg.json +++ /dev/null @@ -1,8 +0,0 @@ -{ - "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:05", - "SpatialReference": { - "Resampling": "1x1x1", - "Reorientation": "RPI" - } -} \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-beijingVerio01/anat/sub-beijingVerio01_space-other_T1w_label-SC_softseg.nii.gz b/derivatives/labels_softseg/sub-beijingVerio01/anat/sub-beijingVerio01_space-other_T1w_label-SC_softseg.nii.gz deleted file mode 100644 index 2bcb1f4634..0000000000 --- a/derivatives/labels_softseg/sub-beijingVerio01/anat/sub-beijingVerio01_space-other_T1w_label-SC_softseg.nii.gz +++ /dev/null @@ -1 +0,0 @@ -/annex/objects/SHA256E-s353483--d26a53c8393f7abe316441ac9e16c16091d027bff090ce91edc2e3f8c3e16e29.nii.gz diff --git a/derivatives/labels_softseg/sub-beijingVerio01/anat/sub-beijingVerio01_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-beijingVerio01/anat/sub-beijingVerio01_space-other_T2star_label-SC_softseg.json deleted file mode 100644 index e981c01895..0000000000 --- a/derivatives/labels_softseg/sub-beijingVerio01/anat/sub-beijingVerio01_space-other_T2star_label-SC_softseg.json +++ /dev/null @@ -1,8 +0,0 @@ -{ - "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:05", - "SpatialReference": { - "Reorientation": "RPI", - "Other": "root-mean square across 4th dimension (if it exists)" - } -} \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-beijingVerio01/anat/sub-beijingVerio01_space-other_T2star_label-SC_softseg.nii.gz b/derivatives/labels_softseg/sub-beijingVerio01/anat/sub-beijingVerio01_space-other_T2star_label-SC_softseg.nii.gz deleted file mode 100644 index 9a8cd9f022..0000000000 --- a/derivatives/labels_softseg/sub-beijingVerio01/anat/sub-beijingVerio01_space-other_T2star_label-SC_softseg.nii.gz +++ /dev/null @@ -1 +0,0 @@ -/annex/objects/SHA256E-s82573--66032b3cdb746b5138827298e95e43cfa1f9f0131244042db91928a408e37e76.nii.gz diff --git a/derivatives/labels_softseg/sub-beijingVerio01/anat/sub-beijingVerio01_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-beijingVerio01/anat/sub-beijingVerio01_space-other_T2w_label-SC_softseg.json deleted file mode 100644 index 06e3c334bc..0000000000 --- a/derivatives/labels_softseg/sub-beijingVerio01/anat/sub-beijingVerio01_space-other_T2w_label-SC_softseg.json +++ /dev/null @@ -1,8 +0,0 @@ -{ - "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:05", - "SpatialReference": { - "Resampling": "0.8x0.8x0.8", - "Reorientation": "RPI" - } -} \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-beijingVerio01/anat/sub-beijingVerio01_space-other_T2w_label-SC_softseg.nii.gz b/derivatives/labels_softseg/sub-beijingVerio01/anat/sub-beijingVerio01_space-other_T2w_label-SC_softseg.nii.gz deleted file mode 100644 index b0c2813d70..0000000000 --- a/derivatives/labels_softseg/sub-beijingVerio01/anat/sub-beijingVerio01_space-other_T2w_label-SC_softseg.nii.gz +++ /dev/null @@ -1 +0,0 @@ -/annex/objects/SHA256E-s195561--406d0112c9979e2400fdeddadf3e77bdc95e70c37f9b097d91f55ff517596570.nii.gz diff --git a/derivatives/labels_softseg/sub-beijingVerio01/dwi/sub-beijingVerio01_rec-average_dwi_label-SC_softseg.json b/derivatives/labels_softseg/sub-beijingVerio01/dwi/sub-beijingVerio01_rec-average_dwi_label-SC_softseg.json deleted file mode 100644 index 6846b7f869..0000000000 --- a/derivatives/labels_softseg/sub-beijingVerio01/dwi/sub-beijingVerio01_rec-average_dwi_label-SC_softseg.json +++ /dev/null @@ -1,4 +0,0 @@ -{ - "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:05" -} \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-beijingVerio01/dwi/sub-beijingVerio01_rec-average_dwi_label-SC_softseg.nii.gz b/derivatives/labels_softseg/sub-beijingVerio01/dwi/sub-beijingVerio01_rec-average_dwi_label-SC_softseg.nii.gz deleted file mode 100644 index f18b79f194..0000000000 --- a/derivatives/labels_softseg/sub-beijingVerio01/dwi/sub-beijingVerio01_rec-average_dwi_label-SC_softseg.nii.gz +++ /dev/null @@ -1 +0,0 @@ -/annex/objects/SHA256E-s9951--6216d135e208007311b9afc694aa7e30c660bb30767ee105dac742857e45ea6c.nii.gz diff --git a/derivatives/labels_softseg/sub-beijingVerio02/anat/sub-beijingVerio02_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-beijingVerio02/anat/sub-beijingVerio02_space-other_T1w_label-SC_softseg.json deleted file mode 100644 index 8037df508c..0000000000 --- a/derivatives/labels_softseg/sub-beijingVerio02/anat/sub-beijingVerio02_space-other_T1w_label-SC_softseg.json +++ /dev/null @@ -1,8 +0,0 @@ -{ - "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:06", - "SpatialReference": { - "Resampling": "1x1x1", - "Reorientation": "RPI" - } -} \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-beijingVerio02/anat/sub-beijingVerio02_space-other_T1w_label-SC_softseg.nii.gz b/derivatives/labels_softseg/sub-beijingVerio02/anat/sub-beijingVerio02_space-other_T1w_label-SC_softseg.nii.gz deleted file mode 100644 index 1ceef16d4f..0000000000 --- a/derivatives/labels_softseg/sub-beijingVerio02/anat/sub-beijingVerio02_space-other_T1w_label-SC_softseg.nii.gz +++ /dev/null @@ -1 +0,0 @@ -/annex/objects/SHA256E-s343540--3b0bbb99a89597d5cdecf6d05269a6e2444b211d77fa6fd639d65945d0c302d0.nii.gz diff --git a/derivatives/labels_softseg/sub-beijingVerio02/anat/sub-beijingVerio02_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-beijingVerio02/anat/sub-beijingVerio02_space-other_T2star_label-SC_softseg.json deleted file mode 100644 index 974bc14cf0..0000000000 --- a/derivatives/labels_softseg/sub-beijingVerio02/anat/sub-beijingVerio02_space-other_T2star_label-SC_softseg.json +++ /dev/null @@ -1,8 +0,0 @@ -{ - "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:06", - "SpatialReference": { - "Reorientation": "RPI", - "Other": "root-mean square across 4th dimension (if it exists)" - } -} \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-beijingVerio02/anat/sub-beijingVerio02_space-other_T2star_label-SC_softseg.nii.gz b/derivatives/labels_softseg/sub-beijingVerio02/anat/sub-beijingVerio02_space-other_T2star_label-SC_softseg.nii.gz deleted file mode 100644 index 04b8766995..0000000000 --- a/derivatives/labels_softseg/sub-beijingVerio02/anat/sub-beijingVerio02_space-other_T2star_label-SC_softseg.nii.gz +++ /dev/null @@ -1 +0,0 @@ -/annex/objects/SHA256E-s80603--9db89577fad511da14b267debcbfa1788eb2a3ba6a207f9aca42b05d99d76ee6.nii.gz diff --git a/derivatives/labels_softseg/sub-beijingVerio02/anat/sub-beijingVerio02_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-beijingVerio02/anat/sub-beijingVerio02_space-other_T2w_label-SC_softseg.json deleted file mode 100644 index ff69d4dbdb..0000000000 --- a/derivatives/labels_softseg/sub-beijingVerio02/anat/sub-beijingVerio02_space-other_T2w_label-SC_softseg.json +++ /dev/null @@ -1,8 +0,0 @@ -{ - "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:06", - "SpatialReference": { - "Resampling": "0.8x0.8x0.8", - "Reorientation": "RPI" - } -} \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-beijingVerio02/anat/sub-beijingVerio02_space-other_T2w_label-SC_softseg.nii.gz b/derivatives/labels_softseg/sub-beijingVerio02/anat/sub-beijingVerio02_space-other_T2w_label-SC_softseg.nii.gz deleted file mode 100644 index 865c8764b5..0000000000 --- a/derivatives/labels_softseg/sub-beijingVerio02/anat/sub-beijingVerio02_space-other_T2w_label-SC_softseg.nii.gz +++ /dev/null @@ -1 +0,0 @@ -/annex/objects/SHA256E-s183099--51dfff09f38f8f92e368a4d0e1bd0aa35a45299d060ee3ad043a67f37f57348a.nii.gz diff --git a/derivatives/labels_softseg/sub-beijingVerio02/dwi/sub-beijingVerio02_rec-average_dwi_label-SC_softseg.json b/derivatives/labels_softseg/sub-beijingVerio02/dwi/sub-beijingVerio02_rec-average_dwi_label-SC_softseg.json deleted file mode 100644 index 85b3970175..0000000000 --- a/derivatives/labels_softseg/sub-beijingVerio02/dwi/sub-beijingVerio02_rec-average_dwi_label-SC_softseg.json +++ /dev/null @@ -1,4 +0,0 @@ -{ - "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:06" -} \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-beijingVerio02/dwi/sub-beijingVerio02_rec-average_dwi_label-SC_softseg.nii.gz b/derivatives/labels_softseg/sub-beijingVerio02/dwi/sub-beijingVerio02_rec-average_dwi_label-SC_softseg.nii.gz deleted file mode 100644 index 2ccc35864e..0000000000 --- a/derivatives/labels_softseg/sub-beijingVerio02/dwi/sub-beijingVerio02_rec-average_dwi_label-SC_softseg.nii.gz +++ /dev/null @@ -1 +0,0 @@ -/annex/objects/SHA256E-s9348--1f06de918b0519796a2c27571bb5573fbc9b9777bc1927f68315af6e8352c138.nii.gz diff --git a/derivatives/labels_softseg/sub-beijingVerio03/anat/sub-beijingVerio03_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-beijingVerio03/anat/sub-beijingVerio03_space-other_T1w_label-SC_softseg.json deleted file mode 100644 index 8037df508c..0000000000 --- a/derivatives/labels_softseg/sub-beijingVerio03/anat/sub-beijingVerio03_space-other_T1w_label-SC_softseg.json +++ /dev/null @@ -1,8 +0,0 @@ -{ - "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:06", - "SpatialReference": { - "Resampling": "1x1x1", - "Reorientation": "RPI" - } -} \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-beijingVerio03/anat/sub-beijingVerio03_space-other_T1w_label-SC_softseg.nii.gz b/derivatives/labels_softseg/sub-beijingVerio03/anat/sub-beijingVerio03_space-other_T1w_label-SC_softseg.nii.gz deleted file mode 100644 index 558a3f3407..0000000000 --- a/derivatives/labels_softseg/sub-beijingVerio03/anat/sub-beijingVerio03_space-other_T1w_label-SC_softseg.nii.gz +++ /dev/null @@ -1 +0,0 @@ -/annex/objects/SHA256E-s346246--5897f67fd7c3bb40ef230fd5efdd54cbcc05db23227d7d8a2f385228867bdfd4.nii.gz diff --git a/derivatives/labels_softseg/sub-beijingVerio03/anat/sub-beijingVerio03_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-beijingVerio03/anat/sub-beijingVerio03_space-other_T2star_label-SC_softseg.json deleted file mode 100644 index 974bc14cf0..0000000000 --- a/derivatives/labels_softseg/sub-beijingVerio03/anat/sub-beijingVerio03_space-other_T2star_label-SC_softseg.json +++ /dev/null @@ -1,8 +0,0 @@ -{ - "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:06", - "SpatialReference": { - "Reorientation": "RPI", - "Other": "root-mean square across 4th dimension (if it exists)" - } -} \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-beijingVerio03/anat/sub-beijingVerio03_space-other_T2star_label-SC_softseg.nii.gz b/derivatives/labels_softseg/sub-beijingVerio03/anat/sub-beijingVerio03_space-other_T2star_label-SC_softseg.nii.gz deleted file mode 100644 index 7bd9adbe1f..0000000000 --- a/derivatives/labels_softseg/sub-beijingVerio03/anat/sub-beijingVerio03_space-other_T2star_label-SC_softseg.nii.gz +++ /dev/null @@ -1 +0,0 @@ -/annex/objects/SHA256E-s80523--386e652043f50674970c777cd480104fe8aa5636aed15c14033c29b2d23056f7.nii.gz diff --git a/derivatives/labels_softseg/sub-beijingVerio03/anat/sub-beijingVerio03_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-beijingVerio03/anat/sub-beijingVerio03_space-other_T2w_label-SC_softseg.json deleted file mode 100644 index ff69d4dbdb..0000000000 --- a/derivatives/labels_softseg/sub-beijingVerio03/anat/sub-beijingVerio03_space-other_T2w_label-SC_softseg.json +++ /dev/null @@ -1,8 +0,0 @@ -{ - "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:06", - "SpatialReference": { - "Resampling": "0.8x0.8x0.8", - "Reorientation": "RPI" - } -} \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-beijingVerio03/anat/sub-beijingVerio03_space-other_T2w_label-SC_softseg.nii.gz b/derivatives/labels_softseg/sub-beijingVerio03/anat/sub-beijingVerio03_space-other_T2w_label-SC_softseg.nii.gz deleted file mode 100644 index f33b7543b1..0000000000 --- a/derivatives/labels_softseg/sub-beijingVerio03/anat/sub-beijingVerio03_space-other_T2w_label-SC_softseg.nii.gz +++ /dev/null @@ -1 +0,0 @@ -/annex/objects/SHA256E-s187836--a4f441fe2a49405030fdf3ca59286d730ed674a5ecb58ea1e4ac4dc14fb67ef1.nii.gz diff --git a/derivatives/labels_softseg/sub-beijingVerio03/dwi/sub-beijingVerio03_rec-average_dwi_label-SC_softseg.json b/derivatives/labels_softseg/sub-beijingVerio03/dwi/sub-beijingVerio03_rec-average_dwi_label-SC_softseg.json deleted file mode 100644 index 85b3970175..0000000000 --- a/derivatives/labels_softseg/sub-beijingVerio03/dwi/sub-beijingVerio03_rec-average_dwi_label-SC_softseg.json +++ /dev/null @@ -1,4 +0,0 @@ -{ - "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:06" -} \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-beijingVerio03/dwi/sub-beijingVerio03_rec-average_dwi_label-SC_softseg.nii.gz b/derivatives/labels_softseg/sub-beijingVerio03/dwi/sub-beijingVerio03_rec-average_dwi_label-SC_softseg.nii.gz deleted file mode 100644 index 28ffdaad6d..0000000000 --- a/derivatives/labels_softseg/sub-beijingVerio03/dwi/sub-beijingVerio03_rec-average_dwi_label-SC_softseg.nii.gz +++ /dev/null @@ -1 +0,0 @@ -/annex/objects/SHA256E-s9363--aec202a1e34086d46211ca2ca5d34995d0ea5ca937ac96da8ddb9e988b3b5680.nii.gz diff --git a/derivatives/labels_softseg/sub-beijingVerio04/anat/sub-beijingVerio04_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-beijingVerio04/anat/sub-beijingVerio04_space-other_T1w_label-SC_softseg.json deleted file mode 100644 index 8037df508c..0000000000 --- a/derivatives/labels_softseg/sub-beijingVerio04/anat/sub-beijingVerio04_space-other_T1w_label-SC_softseg.json +++ /dev/null @@ -1,8 +0,0 @@ -{ - "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:06", - "SpatialReference": { - "Resampling": "1x1x1", - "Reorientation": "RPI" - } -} \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-beijingVerio04/anat/sub-beijingVerio04_space-other_T1w_label-SC_softseg.nii.gz b/derivatives/labels_softseg/sub-beijingVerio04/anat/sub-beijingVerio04_space-other_T1w_label-SC_softseg.nii.gz deleted file mode 100644 index cab12184fd..0000000000 --- a/derivatives/labels_softseg/sub-beijingVerio04/anat/sub-beijingVerio04_space-other_T1w_label-SC_softseg.nii.gz +++ /dev/null @@ -1 +0,0 @@ -/annex/objects/SHA256E-s348472--359a9b97c1e9ab529a7863a85027b6d851b2f0e6c53704657bac703b9c57cbc8.nii.gz diff --git a/derivatives/labels_softseg/sub-beijingVerio04/anat/sub-beijingVerio04_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-beijingVerio04/anat/sub-beijingVerio04_space-other_T2star_label-SC_softseg.json deleted file mode 100644 index 974bc14cf0..0000000000 --- a/derivatives/labels_softseg/sub-beijingVerio04/anat/sub-beijingVerio04_space-other_T2star_label-SC_softseg.json +++ /dev/null @@ -1,8 +0,0 @@ -{ - "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:06", - "SpatialReference": { - "Reorientation": "RPI", - "Other": "root-mean square across 4th dimension (if it exists)" - } -} \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-beijingVerio04/anat/sub-beijingVerio04_space-other_T2star_label-SC_softseg.nii.gz b/derivatives/labels_softseg/sub-beijingVerio04/anat/sub-beijingVerio04_space-other_T2star_label-SC_softseg.nii.gz deleted file mode 100644 index 74f3bb3898..0000000000 --- a/derivatives/labels_softseg/sub-beijingVerio04/anat/sub-beijingVerio04_space-other_T2star_label-SC_softseg.nii.gz +++ /dev/null @@ -1 +0,0 @@ -/annex/objects/SHA256E-s82647--f92cd710f7dacc1502702f57ce1be1002a4a0173ab42edcedd0a818404c4d687.nii.gz diff --git a/derivatives/labels_softseg/sub-beijingVerio04/anat/sub-beijingVerio04_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-beijingVerio04/anat/sub-beijingVerio04_space-other_T2w_label-SC_softseg.json deleted file mode 100644 index ff69d4dbdb..0000000000 --- a/derivatives/labels_softseg/sub-beijingVerio04/anat/sub-beijingVerio04_space-other_T2w_label-SC_softseg.json +++ /dev/null @@ -1,8 +0,0 @@ -{ - "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:06", - "SpatialReference": { - "Resampling": "0.8x0.8x0.8", - "Reorientation": "RPI" - } -} \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-beijingVerio04/anat/sub-beijingVerio04_space-other_T2w_label-SC_softseg.nii.gz b/derivatives/labels_softseg/sub-beijingVerio04/anat/sub-beijingVerio04_space-other_T2w_label-SC_softseg.nii.gz deleted file mode 100644 index 9cdabb9059..0000000000 --- a/derivatives/labels_softseg/sub-beijingVerio04/anat/sub-beijingVerio04_space-other_T2w_label-SC_softseg.nii.gz +++ /dev/null @@ -1 +0,0 @@ -/annex/objects/SHA256E-s192574--d990c33dc7c1de1bfab3c49e54248a09ecde56c90e9c244a51742b4434510d42.nii.gz diff --git a/derivatives/labels_softseg/sub-beijingVerio04/dwi/sub-beijingVerio04_rec-average_dwi_label-SC_softseg.json b/derivatives/labels_softseg/sub-beijingVerio04/dwi/sub-beijingVerio04_rec-average_dwi_label-SC_softseg.json deleted file mode 100644 index 85b3970175..0000000000 --- a/derivatives/labels_softseg/sub-beijingVerio04/dwi/sub-beijingVerio04_rec-average_dwi_label-SC_softseg.json +++ /dev/null @@ -1,4 +0,0 @@ -{ - "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:06" -} \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-beijingVerio04/dwi/sub-beijingVerio04_rec-average_dwi_label-SC_softseg.nii.gz b/derivatives/labels_softseg/sub-beijingVerio04/dwi/sub-beijingVerio04_rec-average_dwi_label-SC_softseg.nii.gz deleted file mode 100644 index aaa866ea97..0000000000 --- a/derivatives/labels_softseg/sub-beijingVerio04/dwi/sub-beijingVerio04_rec-average_dwi_label-SC_softseg.nii.gz +++ /dev/null @@ -1 +0,0 @@ -/annex/objects/SHA256E-s9924--dfcd4dcd54b4f6396a171ac7281660fc8dacf738337ca5f6fb9bbfa488432a4e.nii.gz diff --git a/derivatives/labels_softseg/sub-brnoCeitec01/anat/sub-brnoCeitec01_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz b/derivatives/labels_softseg/sub-brnoCeitec01/anat/sub-brnoCeitec01_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz index 65ef31d1bb..a5f1378669 100644 --- a/derivatives/labels_softseg/sub-brnoCeitec01/anat/sub-brnoCeitec01_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz +++ b/derivatives/labels_softseg/sub-brnoCeitec01/anat/sub-brnoCeitec01_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s37412--2c23fc845c6aa38ca040358a2d475cfeb5086602083a80e073c1ef5e8ff45077.nii.gz +/annex/objects/SHA256E-s37349--e9df26587399496437c1f09207bde05fafcb57df63de041a324c768998e4c046.nii.gz diff --git a/derivatives/labels_softseg/sub-brnoCeitec01/anat/sub-brnoCeitec01_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz b/derivatives/labels_softseg/sub-brnoCeitec01/anat/sub-brnoCeitec01_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz index e315750e9f..b198f9e4ec 100644 --- 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100644 --- a/derivatives/labels_softseg/sub-brnoUhb04/anat/sub-brnoUhb04_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz +++ b/derivatives/labels_softseg/sub-brnoUhb04/anat/sub-brnoUhb04_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s58801--abb77c5f4a5c46c00cb272d8f3a9cea8869f36547d5b682ede1c04891897be3b.nii.gz +/annex/objects/SHA256E-s58792--0b17beaaa40bd53b9d94d5acf54c6aac917d071702265c9128d0ba7b0f4be1d3.nii.gz diff --git a/derivatives/labels_softseg/sub-brnoUhb04/anat/sub-brnoUhb04_space-other_T1w_label-SC_softseg.nii.gz b/derivatives/labels_softseg/sub-brnoUhb04/anat/sub-brnoUhb04_space-other_T1w_label-SC_softseg.nii.gz index cb7c6eb63c..89c6fc2e29 100644 --- a/derivatives/labels_softseg/sub-brnoUhb04/anat/sub-brnoUhb04_space-other_T1w_label-SC_softseg.nii.gz +++ b/derivatives/labels_softseg/sub-brnoUhb04/anat/sub-brnoUhb04_space-other_T1w_label-SC_softseg.nii.gz @@ -1 +1 @@ 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100644 --- a/derivatives/labels_softseg/sub-brnoUhb06/anat/sub-brnoUhb06_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz +++ b/derivatives/labels_softseg/sub-brnoUhb06/anat/sub-brnoUhb06_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s61196--b2edbc36c3c3bf40c84e4491a937b8d3d75e8f0ac2443ab4ab17acbbdc8b0b6b.nii.gz +/annex/objects/SHA256E-s61159--b798519a181b125535d69842ebdc6fd06eeb084972c244303a481f44679517ae.nii.gz diff --git a/derivatives/labels_softseg/sub-brnoUhb06/anat/sub-brnoUhb06_space-other_T1w_label-SC_softseg.nii.gz b/derivatives/labels_softseg/sub-brnoUhb06/anat/sub-brnoUhb06_space-other_T1w_label-SC_softseg.nii.gz index ebf7423689..55bf435bae 100644 --- a/derivatives/labels_softseg/sub-brnoUhb06/anat/sub-brnoUhb06_space-other_T1w_label-SC_softseg.nii.gz +++ b/derivatives/labels_softseg/sub-brnoUhb06/anat/sub-brnoUhb06_space-other_T1w_label-SC_softseg.nii.gz @@ -1 +1 @@ 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100644 --- a/derivatives/labels_softseg/sub-cardiff02/anat/sub-cardiff02_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz +++ b/derivatives/labels_softseg/sub-cardiff02/anat/sub-cardiff02_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s38378--dfb8fa638908dc40707cfd66912b008ce436edde7cf5ab1865c243e3859154bc.nii.gz +/annex/objects/SHA256E-s38369--d3edfa0fd3482da0675fa6ac683b5a287416da5cf95a8be52c46cc1066791e2a.nii.gz diff --git a/derivatives/labels_softseg/sub-cardiff02/anat/sub-cardiff02_space-other_T1w_label-SC_softseg.nii.gz b/derivatives/labels_softseg/sub-cardiff02/anat/sub-cardiff02_space-other_T1w_label-SC_softseg.nii.gz index ab308e8173..de80d680fa 100644 --- a/derivatives/labels_softseg/sub-cardiff02/anat/sub-cardiff02_space-other_T1w_label-SC_softseg.nii.gz +++ b/derivatives/labels_softseg/sub-cardiff02/anat/sub-cardiff02_space-other_T1w_label-SC_softseg.nii.gz @@ -1 +1 @@ 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100644 --- a/derivatives/labels_softseg/sub-cardiff04/anat/sub-cardiff04_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz +++ b/derivatives/labels_softseg/sub-cardiff04/anat/sub-cardiff04_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s38693--c4d6aa5d1b5f0529f8ca4f41beaa41c66431477a7af3ad3cc9c5389918a8b391.nii.gz +/annex/objects/SHA256E-s38616--f9e333372af8bbcda76d01b781ad1e6e764a38639819e445de8ae6bb51ca708a.nii.gz diff --git a/derivatives/labels_softseg/sub-cardiff04/anat/sub-cardiff04_space-other_T1w_label-SC_softseg.nii.gz b/derivatives/labels_softseg/sub-cardiff04/anat/sub-cardiff04_space-other_T1w_label-SC_softseg.nii.gz index 84973b9a69..fc8493ad6f 100644 --- a/derivatives/labels_softseg/sub-cardiff04/anat/sub-cardiff04_space-other_T1w_label-SC_softseg.nii.gz +++ b/derivatives/labels_softseg/sub-cardiff04/anat/sub-cardiff04_space-other_T1w_label-SC_softseg.nii.gz @@ -1 +1 @@ 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100644 --- a/derivatives/labels_softseg/sub-hamburg04/anat/sub-hamburg04_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz +++ b/derivatives/labels_softseg/sub-hamburg04/anat/sub-hamburg04_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s36491--5f8be21f70c5d942b8b88697958076fb99bcc0d23f4b18570d99433bb3e12890.nii.gz +/annex/objects/SHA256E-s36448--966f630dd6d625c155e70a8a9a4eb4590af0535a09488e9bce6df0eb5ad2dd12.nii.gz diff --git a/derivatives/labels_softseg/sub-hamburg04/anat/sub-hamburg04_space-other_T1w_label-SC_softseg.nii.gz b/derivatives/labels_softseg/sub-hamburg04/anat/sub-hamburg04_space-other_T1w_label-SC_softseg.nii.gz index 21fcde9859..918da74a22 100644 --- a/derivatives/labels_softseg/sub-hamburg04/anat/sub-hamburg04_space-other_T1w_label-SC_softseg.nii.gz +++ b/derivatives/labels_softseg/sub-hamburg04/anat/sub-hamburg04_space-other_T1w_label-SC_softseg.nii.gz @@ -1 +1 @@ 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@@ -1 +1 @@ -/annex/objects/SHA256E-s178314--9c921ef08e2905029d884b7b81490f88f65eee92819d7b47dc32622e73518afe.nii.gz +/annex/objects/SHA256E-s178289--ebf0a1eea9f3c5e8c43626a925816f6574adaab0552acb5bb07df8c485e7ad63.nii.gz diff --git a/derivatives/labels_softseg/sub-mniS03/dwi/sub-mniS03_rec-average_dwi_label-SC_softseg.nii.gz b/derivatives/labels_softseg/sub-mniS03/dwi/sub-mniS03_rec-average_dwi_label-SC_softseg.nii.gz index b8e647ee8a..5f3c6569dd 100644 --- a/derivatives/labels_softseg/sub-mniS03/dwi/sub-mniS03_rec-average_dwi_label-SC_softseg.nii.gz +++ b/derivatives/labels_softseg/sub-mniS03/dwi/sub-mniS03_rec-average_dwi_label-SC_softseg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s8724--43006d46c54036b6720e1db92afe60046fb467db17a8fbfbe0307bd79d8d3cd4.nii.gz +/annex/objects/SHA256E-s8687--b64053badeccf68b10c0803fabd842c14bbc717b30694e5dcb9533e3c9e62456.nii.gz diff --git a/derivatives/labels_softseg/sub-mniS04/anat/sub-mniS04_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz 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a/derivatives/labels_softseg/sub-mountSinai02/anat/sub-mountSinai02_space-other_T2w_label-SC_softseg.nii.gz b/derivatives/labels_softseg/sub-mountSinai02/anat/sub-mountSinai02_space-other_T2w_label-SC_softseg.nii.gz index 25c05ee0fc..6802bd4413 100644 --- a/derivatives/labels_softseg/sub-mountSinai02/anat/sub-mountSinai02_space-other_T2w_label-SC_softseg.nii.gz +++ b/derivatives/labels_softseg/sub-mountSinai02/anat/sub-mountSinai02_space-other_T2w_label-SC_softseg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s180934--56748216b7c96b5865ca15af59d9f9fcccc2b6dcd2de6faaa2d4d4c53829f84e.nii.gz +/annex/objects/SHA256E-s180897--164ad20fadcea2865527c08c5f553a7a5499737d67fb88eef25c00cf2fdc22df.nii.gz diff --git a/derivatives/labels_softseg/sub-mountSinai02/dwi/sub-mountSinai02_rec-average_dwi_label-SC_softseg.nii.gz b/derivatives/labels_softseg/sub-mountSinai02/dwi/sub-mountSinai02_rec-average_dwi_label-SC_softseg.nii.gz index 66bacdaa67..786c5f5f75 100644 --- 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a/derivatives/labels_softseg/sub-mountSinai04/anat/sub-mountSinai04_space-other_T2star_label-SC_softseg.nii.gz +++ b/derivatives/labels_softseg/sub-mountSinai04/anat/sub-mountSinai04_space-other_T2star_label-SC_softseg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s85402--1212988eec90f13674f367c07a85d805fd7aeca02876e57c0da9ae1a0b591498.nii.gz +/annex/objects/SHA256E-s85345--1ff7501d359dae8ad62291fd30094d6ca2beadc9a9bc5c7c7148ccde3e09d9f4.nii.gz diff --git a/derivatives/labels_softseg/sub-mountSinai04/anat/sub-mountSinai04_space-other_T2w_label-SC_softseg.nii.gz b/derivatives/labels_softseg/sub-mountSinai04/anat/sub-mountSinai04_space-other_T2w_label-SC_softseg.nii.gz index 1329197f60..d407aee4c9 100644 --- a/derivatives/labels_softseg/sub-mountSinai04/anat/sub-mountSinai04_space-other_T2w_label-SC_softseg.nii.gz +++ b/derivatives/labels_softseg/sub-mountSinai04/anat/sub-mountSinai04_space-other_T2w_label-SC_softseg.nii.gz @@ -1 +1 @@ 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b/derivatives/labels_softseg/sub-mountSinai05/anat/sub-mountSinai05_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz index 6bdb95a0cd..1e0e4ffb7c 100644 --- a/derivatives/labels_softseg/sub-mountSinai05/anat/sub-mountSinai05_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz +++ b/derivatives/labels_softseg/sub-mountSinai05/anat/sub-mountSinai05_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s36904--c3b2d4e5cd99110f65f148ea9861f90edfd056174bb9ab973ddf24e53e4d00c7.nii.gz +/annex/objects/SHA256E-s36841--4eb2b84d76f70adc4540dc88ebfe140f33cd40f2f07a338371bd17d5f02009e7.nii.gz diff --git a/derivatives/labels_softseg/sub-mountSinai05/anat/sub-mountSinai05_space-other_T1w_label-SC_softseg.nii.gz b/derivatives/labels_softseg/sub-mountSinai05/anat/sub-mountSinai05_space-other_T1w_label-SC_softseg.nii.gz index 9e1fb9d3a3..54bbbd9736 100644 --- a/derivatives/labels_softseg/sub-mountSinai05/anat/sub-mountSinai05_space-other_T1w_label-SC_softseg.nii.gz +++ b/derivatives/labels_softseg/sub-mountSinai05/anat/sub-mountSinai05_space-other_T1w_label-SC_softseg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s351658--e6548966d83db10a6616bff6d0b30a7b8d45ef8ec74640d73ddcd0ff467f9e1a.nii.gz +/annex/objects/SHA256E-s351629--5ad4ef2c325224f53295766b21f991a3c15b59ea5e67d8ebb371b85e52317d82.nii.gz diff --git a/derivatives/labels_softseg/sub-mountSinai05/anat/sub-mountSinai05_space-other_T2star_label-SC_softseg.nii.gz b/derivatives/labels_softseg/sub-mountSinai05/anat/sub-mountSinai05_space-other_T2star_label-SC_softseg.nii.gz index 3cb6290a99..1ebab6f764 100644 --- a/derivatives/labels_softseg/sub-mountSinai05/anat/sub-mountSinai05_space-other_T2star_label-SC_softseg.nii.gz +++ b/derivatives/labels_softseg/sub-mountSinai05/anat/sub-mountSinai05_space-other_T2star_label-SC_softseg.nii.gz @@ -1 +1 @@ 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a/derivatives/labels_softseg/sub-mountSinai06/anat/sub-mountSinai06_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz +++ b/derivatives/labels_softseg/sub-mountSinai06/anat/sub-mountSinai06_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s37711--f886fce1645fa9217efdc8edef539f746f1e0edb2d2130f04ebd2e1f249fe493.nii.gz +/annex/objects/SHA256E-s37638--ac3aeb49de39f056b2878659316407ac8320e0f91cd1faadc62b69ff1f6ffccc.nii.gz diff --git a/derivatives/labels_softseg/sub-mountSinai06/anat/sub-mountSinai06_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz b/derivatives/labels_softseg/sub-mountSinai06/anat/sub-mountSinai06_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz index 0735d223f0..888b84e0dc 100644 --- a/derivatives/labels_softseg/sub-mountSinai06/anat/sub-mountSinai06_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz +++ 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b/derivatives/labels_softseg/sub-mountSinai06/anat/sub-mountSinai06_space-other_T2w_label-SC_softseg.nii.gz index a5bb63f620..2ce7a9856a 100644 --- a/derivatives/labels_softseg/sub-mountSinai06/anat/sub-mountSinai06_space-other_T2w_label-SC_softseg.nii.gz +++ b/derivatives/labels_softseg/sub-mountSinai06/anat/sub-mountSinai06_space-other_T2w_label-SC_softseg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s203735--bc3ecb3735f36d0f4e0483c4cb12945a0b11a9b1ced980ac0be5ba3101daec88.nii.gz +/annex/objects/SHA256E-s203709--f184a8fc32356d9333611eb0102ce380f46ce5e983300169229c18e192c3bca7.nii.gz diff --git a/derivatives/labels_softseg/sub-mountSinai06/dwi/sub-mountSinai06_rec-average_dwi_label-SC_softseg.nii.gz b/derivatives/labels_softseg/sub-mountSinai06/dwi/sub-mountSinai06_rec-average_dwi_label-SC_softseg.nii.gz index f76d9536fc..7ac5697613 100644 --- a/derivatives/labels_softseg/sub-mountSinai06/dwi/sub-mountSinai06_rec-average_dwi_label-SC_softseg.nii.gz +++ 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b/derivatives/labels_softseg/sub-mpicbs01/anat/sub-mpicbs01_space-other_T1w_label-SC_softseg.nii.gz index 6764c51752..9066a29a51 100644 --- a/derivatives/labels_softseg/sub-mpicbs01/anat/sub-mpicbs01_space-other_T1w_label-SC_softseg.nii.gz +++ b/derivatives/labels_softseg/sub-mpicbs01/anat/sub-mpicbs01_space-other_T1w_label-SC_softseg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s356087--c6418a15530a8488aecfa35d696941b4402769b3cc4a38dc95a6fa3d2e9f4392.nii.gz +/annex/objects/SHA256E-s356060--d5ebc44d7327e5ca0d9b8bf3892f4b68991508fca8ac9d47943cc1a1bd902778.nii.gz diff --git a/derivatives/labels_softseg/sub-mpicbs01/anat/sub-mpicbs01_space-other_T2star_label-SC_softseg.nii.gz b/derivatives/labels_softseg/sub-mpicbs01/anat/sub-mpicbs01_space-other_T2star_label-SC_softseg.nii.gz index df0728d7d6..92946dd9a9 100644 --- a/derivatives/labels_softseg/sub-mpicbs01/anat/sub-mpicbs01_space-other_T2star_label-SC_softseg.nii.gz +++ 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--git a/derivatives/labels_softseg/sub-mpicbs03/anat/sub-mpicbs03_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz b/derivatives/labels_softseg/sub-mpicbs03/anat/sub-mpicbs03_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz index eae2b8ef6d..20421e320a 100644 --- a/derivatives/labels_softseg/sub-mpicbs03/anat/sub-mpicbs03_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz +++ b/derivatives/labels_softseg/sub-mpicbs03/anat/sub-mpicbs03_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s39947--7f2856ad5a54d1af94063ab006b02a9140db45c8e40c841742e63aeb47e41b5d.nii.gz +/annex/objects/SHA256E-s39967--d9a4218f526e3cabaa98a4a95ef28d2c501a2ed2dde73b674e366bd1a87bec0a.nii.gz diff --git a/derivatives/labels_softseg/sub-mpicbs03/anat/sub-mpicbs03_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz b/derivatives/labels_softseg/sub-mpicbs03/anat/sub-mpicbs03_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz index 59d4d9725b..2310f364af 100644 --- a/derivatives/labels_softseg/sub-mpicbs03/anat/sub-mpicbs03_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz +++ b/derivatives/labels_softseg/sub-mpicbs03/anat/sub-mpicbs03_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s37342--10a7d696ad04fe78461530c5022ac24d5af3bcbb6c6309f83f94102be39e2139.nii.gz +/annex/objects/SHA256E-s37357--2edab6ff66cb2328bbd39a03cbbf98dbc38f2213c62b8f8d50f096bc5f60507e.nii.gz diff --git a/derivatives/labels_softseg/sub-mpicbs03/anat/sub-mpicbs03_space-other_T1w_label-SC_softseg.nii.gz b/derivatives/labels_softseg/sub-mpicbs03/anat/sub-mpicbs03_space-other_T1w_label-SC_softseg.nii.gz index b166b370d0..4e888980ef 100644 --- a/derivatives/labels_softseg/sub-mpicbs03/anat/sub-mpicbs03_space-other_T1w_label-SC_softseg.nii.gz +++ b/derivatives/labels_softseg/sub-mpicbs03/anat/sub-mpicbs03_space-other_T1w_label-SC_softseg.nii.gz @@ -1 +1 @@ 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a/derivatives/labels_softseg/sub-mpicbs03/anat/sub-mpicbs03_space-other_T2w_label-SC_softseg.nii.gz b/derivatives/labels_softseg/sub-mpicbs03/anat/sub-mpicbs03_space-other_T2w_label-SC_softseg.nii.gz index 55c04b9702..2fd5725cf3 100644 --- a/derivatives/labels_softseg/sub-mpicbs03/anat/sub-mpicbs03_space-other_T2w_label-SC_softseg.nii.gz +++ b/derivatives/labels_softseg/sub-mpicbs03/anat/sub-mpicbs03_space-other_T2w_label-SC_softseg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s209237--4a9269fe5fc615bbf5606fa0e0eee7f4e89ce3fcc3cc0f938180708115dc7ac7.nii.gz +/annex/objects/SHA256E-s209209--db43f8e2a20e577fbb00fee53702a8cbbe3cd14d504927ed65131effda17e31b.nii.gz diff --git a/derivatives/labels_softseg/sub-mpicbs03/dwi/sub-mpicbs03_rec-average_dwi_label-SC_softseg.nii.gz b/derivatives/labels_softseg/sub-mpicbs03/dwi/sub-mpicbs03_rec-average_dwi_label-SC_softseg.nii.gz index aa0565ad71..60769e7736 100644 --- a/derivatives/labels_softseg/sub-mpicbs03/dwi/sub-mpicbs03_rec-average_dwi_label-SC_softseg.nii.gz +++ b/derivatives/labels_softseg/sub-mpicbs03/dwi/sub-mpicbs03_rec-average_dwi_label-SC_softseg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s11067--861be7af2aae305d767a67402f2268f8f593023160955d46e3b116b6b7f3b257.nii.gz +/annex/objects/SHA256E-s11027--96b8119cdc3850cc566f975fae0408abe369120fc3c7a56f632d2ecdcdedf5bc.nii.gz diff --git a/derivatives/labels_softseg/sub-mpicbs05/anat/sub-mpicbs05_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz b/derivatives/labels_softseg/sub-mpicbs05/anat/sub-mpicbs05_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz index 108d1eb9b1..dee7ece853 100644 --- a/derivatives/labels_softseg/sub-mpicbs05/anat/sub-mpicbs05_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz +++ b/derivatives/labels_softseg/sub-mpicbs05/anat/sub-mpicbs05_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz @@ -1 +1 @@ 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b/derivatives/labels_softseg/sub-oxfordFmrib03/dwi/sub-oxfordFmrib03_rec-average_dwi_label-SC_softseg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s9620--a0c269fc5a873040817a7ab01034a136f992b98422ac4ef493e7453769ebc87b.nii.gz +/annex/objects/SHA256E-s9576--080c8e03d2e6198c1a8e2fb17cf0d055f7275be926495d03546fff777314053c.nii.gz diff --git a/derivatives/labels_softseg/sub-oxfordFmrib04/anat/sub-oxfordFmrib04_flip-1_mt-on_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-oxfordFmrib04/anat/sub-oxfordFmrib04_flip-1_mt-on_space-other_MTS_label-SC_softseg.json deleted file mode 100644 index c868dbaa95..0000000000 --- a/derivatives/labels_softseg/sub-oxfordFmrib04/anat/sub-oxfordFmrib04_flip-1_mt-on_space-other_MTS_label-SC_softseg.json +++ /dev/null @@ -1,7 +0,0 @@ -{ - "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:36", - "SpatialReference": { - "Reorientation": "RPI" - } -} \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-oxfordFmrib04/anat/sub-oxfordFmrib04_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz b/derivatives/labels_softseg/sub-oxfordFmrib04/anat/sub-oxfordFmrib04_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz deleted file mode 100644 index b0e0651793..0000000000 --- a/derivatives/labels_softseg/sub-oxfordFmrib04/anat/sub-oxfordFmrib04_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz +++ /dev/null @@ -1 +0,0 @@ -/annex/objects/SHA256E-s39871--dbb0d124e1a3ced3e12c8b71fe0203f9940dd5c5cdfb68582ef583a0a8c84649.nii.gz diff --git a/derivatives/labels_softseg/sub-oxfordFmrib04/anat/sub-oxfordFmrib04_flip-2_mt-off_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-oxfordFmrib04/anat/sub-oxfordFmrib04_flip-2_mt-off_space-other_MTS_label-SC_softseg.json deleted file mode 100644 index c868dbaa95..0000000000 --- a/derivatives/labels_softseg/sub-oxfordFmrib04/anat/sub-oxfordFmrib04_flip-2_mt-off_space-other_MTS_label-SC_softseg.json +++ /dev/null @@ -1,7 +0,0 @@ -{ - "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:36", - "SpatialReference": { - "Reorientation": "RPI" - } -} \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-oxfordFmrib04/anat/sub-oxfordFmrib04_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz b/derivatives/labels_softseg/sub-oxfordFmrib04/anat/sub-oxfordFmrib04_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz deleted file mode 100644 index c8ecbbf212..0000000000 --- a/derivatives/labels_softseg/sub-oxfordFmrib04/anat/sub-oxfordFmrib04_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz +++ /dev/null @@ -1 +0,0 @@ -/annex/objects/SHA256E-s38565--a172c77e216b56639a39da262d18986482356652ebb10084b9fe218ba2e4faad.nii.gz diff --git a/derivatives/labels_softseg/sub-oxfordFmrib04/anat/sub-oxfordFmrib04_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-oxfordFmrib04/anat/sub-oxfordFmrib04_space-other_T1w_label-SC_softseg.json deleted file mode 100644 index d3f4731946..0000000000 --- a/derivatives/labels_softseg/sub-oxfordFmrib04/anat/sub-oxfordFmrib04_space-other_T1w_label-SC_softseg.json +++ /dev/null @@ -1,8 +0,0 @@ -{ - "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:36", - "SpatialReference": { - "Resampling": "1x1x1", - "Reorientation": "RPI" - } -} \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-oxfordFmrib04/anat/sub-oxfordFmrib04_space-other_T1w_label-SC_softseg.nii.gz b/derivatives/labels_softseg/sub-oxfordFmrib04/anat/sub-oxfordFmrib04_space-other_T1w_label-SC_softseg.nii.gz deleted file mode 100644 index 75e7791128..0000000000 --- a/derivatives/labels_softseg/sub-oxfordFmrib04/anat/sub-oxfordFmrib04_space-other_T1w_label-SC_softseg.nii.gz +++ /dev/null @@ -1 +0,0 @@ -/annex/objects/SHA256E-s304671--55f70b1d90ea327426513aab684b68657ade450aca08f9e2e4887bc7a5fdc8ed.nii.gz diff --git 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a/derivatives/labels_softseg/sub-oxfordOhba01/anat/sub-oxfordOhba01_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz +++ b/derivatives/labels_softseg/sub-oxfordOhba01/anat/sub-oxfordOhba01_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s37764--956ad0aa513994731ce85fe6c4c17dcc76626987ead7d22e3a1d365ca4f4b52b.nii.gz +/annex/objects/SHA256E-s37752--ff1eaa320691b4fa5670b9a0705c35adad274036b994430a6b779ca689751237.nii.gz diff --git a/derivatives/labels_softseg/sub-oxfordOhba01/anat/sub-oxfordOhba01_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz b/derivatives/labels_softseg/sub-oxfordOhba01/anat/sub-oxfordOhba01_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz index af7008a772..9a3f7d89d5 100644 --- a/derivatives/labels_softseg/sub-oxfordOhba01/anat/sub-oxfordOhba01_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz +++ b/derivatives/labels_softseg/sub-oxfordOhba01/anat/sub-oxfordOhba01_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s36973--d58e4f35e1cae14b62daf4491bef046a94ee72a8fa0386325f4d3af20c4ec10d.nii.gz +/annex/objects/SHA256E-s36986--ce4d2ce234a9a068842dbc3ee95e5e6df7f124954689d2c27922d6849f6c7200.nii.gz diff --git a/derivatives/labels_softseg/sub-oxfordOhba01/anat/sub-oxfordOhba01_space-other_T1w_label-SC_softseg.nii.gz b/derivatives/labels_softseg/sub-oxfordOhba01/anat/sub-oxfordOhba01_space-other_T1w_label-SC_softseg.nii.gz index 994240df6d..5a66cc48c8 100644 --- a/derivatives/labels_softseg/sub-oxfordOhba01/anat/sub-oxfordOhba01_space-other_T1w_label-SC_softseg.nii.gz +++ b/derivatives/labels_softseg/sub-oxfordOhba01/anat/sub-oxfordOhba01_space-other_T1w_label-SC_softseg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s356541--908148b3b69771a823ef8ae7a2a23152a0168f143878be48d9aa3485379c70de.nii.gz 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b/derivatives/labels_softseg/sub-oxfordOhba01/anat/sub-oxfordOhba01_space-other_T2w_label-SC_softseg.nii.gz index d5c5affda8..66e9647720 100644 --- a/derivatives/labels_softseg/sub-oxfordOhba01/anat/sub-oxfordOhba01_space-other_T2w_label-SC_softseg.nii.gz +++ b/derivatives/labels_softseg/sub-oxfordOhba01/anat/sub-oxfordOhba01_space-other_T2w_label-SC_softseg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s185278--6c9fd9005219b97beea4ca4545fc680a3c1b16296633c8cc57065f56913a8323.nii.gz +/annex/objects/SHA256E-s185246--01c144ababa8461a429af1571a14e1aedd5d2eaa8785b7ad421055ddb3cb3017.nii.gz diff --git a/derivatives/labels_softseg/sub-oxfordOhba01/dwi/sub-oxfordOhba01_rec-average_dwi_label-SC_softseg.nii.gz b/derivatives/labels_softseg/sub-oxfordOhba01/dwi/sub-oxfordOhba01_rec-average_dwi_label-SC_softseg.nii.gz index cf2581f13c..4c70429d78 100644 --- a/derivatives/labels_softseg/sub-oxfordOhba01/dwi/sub-oxfordOhba01_rec-average_dwi_label-SC_softseg.nii.gz +++ b/derivatives/labels_softseg/sub-oxfordOhba01/dwi/sub-oxfordOhba01_rec-average_dwi_label-SC_softseg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s9432--3a3afdc23f3fd57a15bc8f1432b4e17d6920bcc33324c3911bd28586176a8238.nii.gz +/annex/objects/SHA256E-s9389--3a0c14dfc4feb805c13afbe176f620fd8fe7a1ac8014c13b34537c51a83cc2a4.nii.gz diff --git a/derivatives/labels_softseg/sub-oxfordOhba02/anat/sub-oxfordOhba02_flip-1_mt-on_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-oxfordOhba02/anat/sub-oxfordOhba02_flip-1_mt-on_space-other_MTS_label-SC_softseg.json deleted file mode 100644 index 71f631e875..0000000000 --- a/derivatives/labels_softseg/sub-oxfordOhba02/anat/sub-oxfordOhba02_flip-1_mt-on_space-other_MTS_label-SC_softseg.json +++ /dev/null @@ -1,7 +0,0 @@ -{ - "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:38", - "SpatialReference": { - "Reorientation": "RPI" - } -} \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-oxfordOhba02/anat/sub-oxfordOhba02_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz b/derivatives/labels_softseg/sub-oxfordOhba02/anat/sub-oxfordOhba02_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz deleted file mode 100644 index 5ffda9bc48..0000000000 --- a/derivatives/labels_softseg/sub-oxfordOhba02/anat/sub-oxfordOhba02_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz +++ /dev/null @@ -1 +0,0 @@ -/annex/objects/SHA256E-s38569--f08a5661b9318db9e3e74630835a1e37583674772b6e3732b9d79bd3764e7094.nii.gz diff --git a/derivatives/labels_softseg/sub-oxfordOhba02/anat/sub-oxfordOhba02_flip-2_mt-off_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-oxfordOhba02/anat/sub-oxfordOhba02_flip-2_mt-off_space-other_MTS_label-SC_softseg.json deleted file mode 100644 index 71f631e875..0000000000 --- a/derivatives/labels_softseg/sub-oxfordOhba02/anat/sub-oxfordOhba02_flip-2_mt-off_space-other_MTS_label-SC_softseg.json +++ /dev/null @@ -1,7 +0,0 @@ -{ - "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:38", - "SpatialReference": { - "Reorientation": "RPI" - } -} \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-oxfordOhba02/anat/sub-oxfordOhba02_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz b/derivatives/labels_softseg/sub-oxfordOhba02/anat/sub-oxfordOhba02_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz deleted file mode 100644 index ef6e474395..0000000000 --- a/derivatives/labels_softseg/sub-oxfordOhba02/anat/sub-oxfordOhba02_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz +++ /dev/null @@ -1 +0,0 @@ -/annex/objects/SHA256E-s37382--750d2fbdfc2092512b9d9021af0d75cb0408797002377d272b6928550df8eb78.nii.gz diff --git a/derivatives/labels_softseg/sub-oxfordOhba02/anat/sub-oxfordOhba02_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-oxfordOhba02/anat/sub-oxfordOhba02_space-other_T1w_label-SC_softseg.json deleted file mode 100644 index 056e138a22..0000000000 --- a/derivatives/labels_softseg/sub-oxfordOhba02/anat/sub-oxfordOhba02_space-other_T1w_label-SC_softseg.json +++ /dev/null @@ -1,8 +0,0 @@ -{ - "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:38", - "SpatialReference": { - "Resampling": "1x1x1", - "Reorientation": "RPI" - } -} \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-oxfordOhba02/anat/sub-oxfordOhba02_space-other_T1w_label-SC_softseg.nii.gz b/derivatives/labels_softseg/sub-oxfordOhba02/anat/sub-oxfordOhba02_space-other_T1w_label-SC_softseg.nii.gz deleted file mode 100644 index a3d25ea777..0000000000 --- a/derivatives/labels_softseg/sub-oxfordOhba02/anat/sub-oxfordOhba02_space-other_T1w_label-SC_softseg.nii.gz +++ /dev/null @@ -1 +0,0 @@ -/annex/objects/SHA256E-s359624--88b8778ee5e35bcc7d7856a3a896d56d71ad4e390be713f9da2085a1881222ff.nii.gz diff --git a/derivatives/labels_softseg/sub-oxfordOhba02/anat/sub-oxfordOhba02_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-oxfordOhba02/anat/sub-oxfordOhba02_space-other_T2star_label-SC_softseg.json deleted file mode 100644 index 0d8e85563d..0000000000 --- a/derivatives/labels_softseg/sub-oxfordOhba02/anat/sub-oxfordOhba02_space-other_T2star_label-SC_softseg.json +++ /dev/null @@ -1,8 +0,0 @@ -{ - "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:38", - "SpatialReference": { - "Reorientation": "RPI", - "Other": "root-mean square across 4th dimension (if it exists)" - } -} \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-oxfordOhba02/anat/sub-oxfordOhba02_space-other_T2star_label-SC_softseg.nii.gz b/derivatives/labels_softseg/sub-oxfordOhba02/anat/sub-oxfordOhba02_space-other_T2star_label-SC_softseg.nii.gz deleted file mode 100644 index 7aa6d3a30b..0000000000 --- a/derivatives/labels_softseg/sub-oxfordOhba02/anat/sub-oxfordOhba02_space-other_T2star_label-SC_softseg.nii.gz +++ /dev/null @@ -1 +0,0 @@ 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a/derivatives/labels_softseg/sub-oxfordOhba02/anat/sub-oxfordOhba02_space-other_T2w_label-SC_softseg.nii.gz +++ /dev/null @@ -1 +0,0 @@ -/annex/objects/SHA256E-s206018--83fe9a4ac42ec2095cb5d92c600b5dea164bacefbc016b3bf26c6b865eecb5c3.nii.gz diff --git a/derivatives/labels_softseg/sub-oxfordOhba03/anat/sub-oxfordOhba03_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz b/derivatives/labels_softseg/sub-oxfordOhba03/anat/sub-oxfordOhba03_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz index 8c86fe28d2..9f9c1f0b6d 100644 --- a/derivatives/labels_softseg/sub-oxfordOhba03/anat/sub-oxfordOhba03_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz +++ b/derivatives/labels_softseg/sub-oxfordOhba03/anat/sub-oxfordOhba03_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s37908--a63c84f87e62a4d02e12846358ed863cae56c2e64415e397b5d4402480183093.nii.gz +/annex/objects/SHA256E-s37870--0bd99555e3027ac64172e248c92e44d1cb0b88da5bba18ab127d33c7f7a611fa.nii.gz diff --git a/derivatives/labels_softseg/sub-oxfordOhba03/anat/sub-oxfordOhba03_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz b/derivatives/labels_softseg/sub-oxfordOhba03/anat/sub-oxfordOhba03_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz index fbccb00fef..978acde2ac 100644 --- a/derivatives/labels_softseg/sub-oxfordOhba03/anat/sub-oxfordOhba03_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz +++ b/derivatives/labels_softseg/sub-oxfordOhba03/anat/sub-oxfordOhba03_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s37459--1032de788613a6a5a36e100c5092f7c95c90d9d11942f2313abf7ee263e93070.nii.gz +/annex/objects/SHA256E-s37429--df6f553ec1504867c064b8c990e5bd0b7dfa54e5616237a8cbd7060355cc7cbf.nii.gz diff --git a/derivatives/labels_softseg/sub-oxfordOhba03/anat/sub-oxfordOhba03_space-other_T1w_label-SC_softseg.nii.gz b/derivatives/labels_softseg/sub-oxfordOhba03/anat/sub-oxfordOhba03_space-other_T1w_label-SC_softseg.nii.gz index 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0d04d5db66..a5df3f9d79 100644 --- a/derivatives/labels_softseg/sub-tokyo750w01/anat/sub-tokyo750w01_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz +++ b/derivatives/labels_softseg/sub-tokyo750w01/anat/sub-tokyo750w01_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s47721--0fd579413d375ba2f39989cab6d8676dbd1b823c6d383c0434944d81ae3de3b7.nii.gz +/annex/objects/SHA256E-s47719--a98086de0d7c87c377c9001cb52c86ec51108e713b100e5320bdea8d4be17c2b.nii.gz diff --git a/derivatives/labels_softseg/sub-tokyo750w01/anat/sub-tokyo750w01_space-other_T1w_label-SC_softseg.nii.gz b/derivatives/labels_softseg/sub-tokyo750w01/anat/sub-tokyo750w01_space-other_T1w_label-SC_softseg.nii.gz index 7c1e724e79..bb178428bd 100644 --- a/derivatives/labels_softseg/sub-tokyo750w01/anat/sub-tokyo750w01_space-other_T1w_label-SC_softseg.nii.gz +++ b/derivatives/labels_softseg/sub-tokyo750w01/anat/sub-tokyo750w01_space-other_T1w_label-SC_softseg.nii.gz @@ -1 +1 @@ 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28380c37d3..2ad95940cf 100644 --- a/derivatives/labels_softseg/sub-tokyo750w03/anat/sub-tokyo750w03_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz +++ b/derivatives/labels_softseg/sub-tokyo750w03/anat/sub-tokyo750w03_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s37447--80597e58350069fae245976b3f622decbef226423b905f936ecc77b4fca9e363.nii.gz +/annex/objects/SHA256E-s37216--60d9927696dd00bf724e39de6d6a4c6a3d24d69f0b99e04f5dda2e52895b0141.nii.gz diff --git a/derivatives/labels_softseg/sub-tokyo750w03/anat/sub-tokyo750w03_space-other_T1w_label-SC_softseg.nii.gz b/derivatives/labels_softseg/sub-tokyo750w03/anat/sub-tokyo750w03_space-other_T1w_label-SC_softseg.nii.gz index 1d3a8636f7..4e437e31c4 100644 --- a/derivatives/labels_softseg/sub-tokyo750w03/anat/sub-tokyo750w03_space-other_T1w_label-SC_softseg.nii.gz +++ b/derivatives/labels_softseg/sub-tokyo750w03/anat/sub-tokyo750w03_space-other_T1w_label-SC_softseg.nii.gz @@ -1 +1 @@ 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1cd91bd8b7..0e28ad63ae 100644 --- a/derivatives/labels_softseg/sub-tokyo750w05/anat/sub-tokyo750w05_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz +++ b/derivatives/labels_softseg/sub-tokyo750w05/anat/sub-tokyo750w05_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s32134--e754c215eae3e81f790b948d84d00975ad1cfb92a4ff4c27584c700a58c74473.nii.gz +/annex/objects/SHA256E-s32069--55f05fe6d8a37e8ba9b5da0eeb04cb1f2c2d7842a69493cbc8f225e801b65ada.nii.gz diff --git a/derivatives/labels_softseg/sub-tokyo750w05/anat/sub-tokyo750w05_space-other_T1w_label-SC_softseg.nii.gz b/derivatives/labels_softseg/sub-tokyo750w05/anat/sub-tokyo750w05_space-other_T1w_label-SC_softseg.nii.gz index e50ed0b806..c407b098ee 100644 --- a/derivatives/labels_softseg/sub-tokyo750w05/anat/sub-tokyo750w05_space-other_T1w_label-SC_softseg.nii.gz +++ b/derivatives/labels_softseg/sub-tokyo750w05/anat/sub-tokyo750w05_space-other_T1w_label-SC_softseg.nii.gz @@ -1 +1 @@ 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888b74de70..4720db4d52 100644 --- a/derivatives/labels_softseg/sub-tokyo750w07/anat/sub-tokyo750w07_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz +++ b/derivatives/labels_softseg/sub-tokyo750w07/anat/sub-tokyo750w07_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s32748--b6f9ede00869622d90595d3734465830988d997765bc20593f16ac1a4ab00fff.nii.gz +/annex/objects/SHA256E-s32697--a6e07ac2d43b32fda3c1229491f99c3fd876d680293288731281e4845c8586dd.nii.gz diff --git a/derivatives/labels_softseg/sub-tokyo750w07/anat/sub-tokyo750w07_space-other_T1w_label-SC_softseg.nii.gz b/derivatives/labels_softseg/sub-tokyo750w07/anat/sub-tokyo750w07_space-other_T1w_label-SC_softseg.nii.gz index cf81db708c..6d7907f28e 100644 --- a/derivatives/labels_softseg/sub-tokyo750w07/anat/sub-tokyo750w07_space-other_T1w_label-SC_softseg.nii.gz +++ b/derivatives/labels_softseg/sub-tokyo750w07/anat/sub-tokyo750w07_space-other_T1w_label-SC_softseg.nii.gz @@ -1 +1 @@ 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a/derivatives/labels_softseg/sub-tokyoSkyra07/anat/sub-tokyoSkyra07_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz +++ b/derivatives/labels_softseg/sub-tokyoSkyra07/anat/sub-tokyoSkyra07_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s36818--c13e6ba74f083839423487201f713912527e1ca1721c0a3c57ea269c81c9d147.nii.gz +/annex/objects/SHA256E-s36836--e010181bc028011a98b8b1c0ae14c6285a82f7d3659b801e26dff0e550199859.nii.gz diff --git a/derivatives/labels_softseg/sub-tokyoSkyra07/anat/sub-tokyoSkyra07_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz b/derivatives/labels_softseg/sub-tokyoSkyra07/anat/sub-tokyoSkyra07_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz index e64aa6f215..b9e94ed575 100644 --- a/derivatives/labels_softseg/sub-tokyoSkyra07/anat/sub-tokyoSkyra07_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz +++ b/derivatives/labels_softseg/sub-tokyoSkyra07/anat/sub-tokyoSkyra07_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s36183--0b2b890ceec0dac8c9758ac66df41f21f6cb167b83a8a1ff93992bb65ee73128.nii.gz +/annex/objects/SHA256E-s36147--a2d1dc8b74d9dcd2f400325c39c976110b8eacd0ba2030dbbfb9dfdc3baefd9f.nii.gz diff --git a/derivatives/labels_softseg/sub-tokyoSkyra07/anat/sub-tokyoSkyra07_space-other_T1w_label-SC_softseg.nii.gz b/derivatives/labels_softseg/sub-tokyoSkyra07/anat/sub-tokyoSkyra07_space-other_T1w_label-SC_softseg.nii.gz index 73de4fa552..48a11ded6b 100644 --- a/derivatives/labels_softseg/sub-tokyoSkyra07/anat/sub-tokyoSkyra07_space-other_T1w_label-SC_softseg.nii.gz +++ b/derivatives/labels_softseg/sub-tokyoSkyra07/anat/sub-tokyoSkyra07_space-other_T1w_label-SC_softseg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s349026--b2c3a65951570ba45d07ff6c189263b9d9750f56d935adfe522d1369d42abdf8.nii.gz 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b/derivatives/labels_softseg/sub-tokyoSkyra07/anat/sub-tokyoSkyra07_space-other_T2w_label-SC_softseg.nii.gz index d023ce03d7..4b731079fe 100644 --- a/derivatives/labels_softseg/sub-tokyoSkyra07/anat/sub-tokyoSkyra07_space-other_T2w_label-SC_softseg.nii.gz +++ b/derivatives/labels_softseg/sub-tokyoSkyra07/anat/sub-tokyoSkyra07_space-other_T2w_label-SC_softseg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s179340--7a01c75f9a262371b611643074f9c3f52186173c3c75a54abef2f2aed7b8645c.nii.gz +/annex/objects/SHA256E-s179309--adae24145260eccd42b1f349068b0a3ac6e3a4358e4e369229dc80cf40db1050.nii.gz diff --git a/derivatives/labels_softseg/sub-tokyoSkyra07/dwi/sub-tokyoSkyra07_rec-average_dwi_label-SC_softseg.nii.gz b/derivatives/labels_softseg/sub-tokyoSkyra07/dwi/sub-tokyoSkyra07_rec-average_dwi_label-SC_softseg.nii.gz index f5e89d3797..65590b4335 100644 --- a/derivatives/labels_softseg/sub-tokyoSkyra07/dwi/sub-tokyoSkyra07_rec-average_dwi_label-SC_softseg.nii.gz +++ b/derivatives/labels_softseg/sub-tokyoSkyra07/dwi/sub-tokyoSkyra07_rec-average_dwi_label-SC_softseg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s8779--87ce0e28a6b5353b841a4f933cc65cda255a6e8206e78c36ec7ad15f1ab61f00.nii.gz +/annex/objects/SHA256E-s8736--2fc244192201d58a1faf179d057e597c0199fe4dc6509832cfa7412fe351f350.nii.gz diff --git a/derivatives/labels_softseg/sub-ubc01/anat/sub-ubc01_flip-1_mt-on_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-ubc01/anat/sub-ubc01_flip-1_mt-on_space-other_MTS_label-SC_softseg.json deleted file mode 100644 index 3728ff0dfa..0000000000 --- a/derivatives/labels_softseg/sub-ubc01/anat/sub-ubc01_flip-1_mt-on_space-other_MTS_label-SC_softseg.json +++ /dev/null @@ -1,7 +0,0 @@ -{ - "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:54", - "SpatialReference": { - "Reorientation": "RPI" - } -} \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-ubc01/anat/sub-ubc01_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz b/derivatives/labels_softseg/sub-ubc01/anat/sub-ubc01_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz deleted file mode 100644 index 43780a063e..0000000000 --- a/derivatives/labels_softseg/sub-ubc01/anat/sub-ubc01_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz +++ /dev/null @@ -1 +0,0 @@ -/annex/objects/SHA256E-s38712--863db1f2e4ab9b13435737545c444927e65da83f7b6f2682d5b801c42f12c4f0.nii.gz diff --git a/derivatives/labels_softseg/sub-ubc01/anat/sub-ubc01_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-ubc01/anat/sub-ubc01_space-other_T1w_label-SC_softseg.json deleted file mode 100644 index dbfa6648e5..0000000000 --- a/derivatives/labels_softseg/sub-ubc01/anat/sub-ubc01_space-other_T1w_label-SC_softseg.json +++ /dev/null @@ -1,8 +0,0 @@ -{ - "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:54", - "SpatialReference": { - "Resampling": "1x1x1", - "Reorientation": "RPI" - } -} \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-ubc01/anat/sub-ubc01_space-other_T1w_label-SC_softseg.nii.gz b/derivatives/labels_softseg/sub-ubc01/anat/sub-ubc01_space-other_T1w_label-SC_softseg.nii.gz deleted file mode 100644 index 7c0a9774c2..0000000000 --- a/derivatives/labels_softseg/sub-ubc01/anat/sub-ubc01_space-other_T1w_label-SC_softseg.nii.gz +++ /dev/null @@ -1 +0,0 @@ -/annex/objects/SHA256E-s408705--e830419547bd1d422a3fdd5e9ca232a442cbccf741941a28b5ca0858dda0265d.nii.gz diff --git a/derivatives/labels_softseg/sub-ubc01/anat/sub-ubc01_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-ubc01/anat/sub-ubc01_space-other_T2star_label-SC_softseg.json deleted file mode 100644 index c60b53bee3..0000000000 --- a/derivatives/labels_softseg/sub-ubc01/anat/sub-ubc01_space-other_T2star_label-SC_softseg.json +++ /dev/null @@ -1,8 +0,0 @@ -{ - "Author": "Sandrine Bedard", - "Date": "2022-10-22 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+++ /dev/null @@ -1,8 +0,0 @@ -{ - "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:54", - "SpatialReference": { - "Resampling": "0.8x0.8x0.8", - "Reorientation": "RPI" - } -} \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-ubc01/anat/sub-ubc01_space-other_T2w_label-SC_softseg.nii.gz b/derivatives/labels_softseg/sub-ubc01/anat/sub-ubc01_space-other_T2w_label-SC_softseg.nii.gz deleted file mode 100644 index af292f9ec7..0000000000 --- a/derivatives/labels_softseg/sub-ubc01/anat/sub-ubc01_space-other_T2w_label-SC_softseg.nii.gz +++ /dev/null @@ -1 +0,0 @@ -/annex/objects/SHA256E-s171243--313b682297f9d5c2fc2ff396bcf0f000b038184d03fb12c3e17b1c77dd064f37.nii.gz diff --git a/derivatives/labels_softseg/sub-ubc01/dwi/sub-ubc01_rec-average_dwi_label-SC_softseg.json b/derivatives/labels_softseg/sub-ubc01/dwi/sub-ubc01_rec-average_dwi_label-SC_softseg.json deleted file mode 100644 index 66beabb179..0000000000 --- a/derivatives/labels_softseg/sub-ubc01/dwi/sub-ubc01_rec-average_dwi_label-SC_softseg.json +++ /dev/null @@ -1,4 +0,0 @@ -{ - "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:54" -} \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-ubc01/dwi/sub-ubc01_rec-average_dwi_label-SC_softseg.nii.gz b/derivatives/labels_softseg/sub-ubc01/dwi/sub-ubc01_rec-average_dwi_label-SC_softseg.nii.gz deleted file mode 100644 index 403cfe250a..0000000000 --- a/derivatives/labels_softseg/sub-ubc01/dwi/sub-ubc01_rec-average_dwi_label-SC_softseg.nii.gz +++ /dev/null @@ -1 +0,0 @@ -/annex/objects/SHA256E-s9953--12db68ac91c4331606c326b0ba9833692a8af5d90d2d4003979894ccfd738fe0.nii.gz diff --git a/derivatives/labels_softseg/sub-ubc02/anat/sub-ubc02_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz b/derivatives/labels_softseg/sub-ubc02/anat/sub-ubc02_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz index b375c2eae2..93c896d391 100644 --- a/derivatives/labels_softseg/sub-ubc02/anat/sub-ubc02_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz +++ b/derivatives/labels_softseg/sub-ubc02/anat/sub-ubc02_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s43485--5ca573f53f7b02684ba0637bb31106afdf79ec4bc7873a26624e6111a8f59c28.nii.gz +/annex/objects/SHA256E-s43451--e05fb4bdd72a2605dedad2d0a4f8e84e59ab6162450769c1ae7e71a2a1f87884.nii.gz diff --git a/derivatives/labels_softseg/sub-ubc02/anat/sub-ubc02_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz b/derivatives/labels_softseg/sub-ubc02/anat/sub-ubc02_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz index 0d18cd4e40..3235af6818 100644 --- a/derivatives/labels_softseg/sub-ubc02/anat/sub-ubc02_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz +++ b/derivatives/labels_softseg/sub-ubc02/anat/sub-ubc02_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz @@ -1 +1 @@ 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b/derivatives/labels_softseg/sub-ubc02/anat/sub-ubc02_space-other_T2star_label-SC_softseg.nii.gz index 417a89ba0f..70a573105f 100644 --- a/derivatives/labels_softseg/sub-ubc02/anat/sub-ubc02_space-other_T2star_label-SC_softseg.nii.gz +++ b/derivatives/labels_softseg/sub-ubc02/anat/sub-ubc02_space-other_T2star_label-SC_softseg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s93422--48cb68eebe64b992d9970a1c4a2efba21023016777ee534c04c30ce3996faa8c.nii.gz +/annex/objects/SHA256E-s93372--3d9aad4961d0b4b079456c61f9c7cb2a9f0ab7999831d1f8d538159943703f73.nii.gz diff --git a/derivatives/labels_softseg/sub-ubc02/anat/sub-ubc02_space-other_T2w_label-SC_softseg.nii.gz b/derivatives/labels_softseg/sub-ubc02/anat/sub-ubc02_space-other_T2w_label-SC_softseg.nii.gz index ee61c17d07..c94f844bfb 100644 --- a/derivatives/labels_softseg/sub-ubc02/anat/sub-ubc02_space-other_T2w_label-SC_softseg.nii.gz +++ b/derivatives/labels_softseg/sub-ubc02/anat/sub-ubc02_space-other_T2w_label-SC_softseg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s227194--71bf8db134638ddb394bc10c57f54f8fa5e84e454f5653ee773f05e76e5bcaea.nii.gz +/annex/objects/SHA256E-s227169--42cceabd5d1687436ecfd8d391bca9f7e0704c0b118cd6ca52753c9966700ffb.nii.gz diff --git a/derivatives/labels_softseg/sub-ubc02/dwi/sub-ubc02_rec-average_dwi_label-SC_softseg.nii.gz b/derivatives/labels_softseg/sub-ubc02/dwi/sub-ubc02_rec-average_dwi_label-SC_softseg.nii.gz index 55f1e48498..f4f8cd737e 100644 --- a/derivatives/labels_softseg/sub-ubc02/dwi/sub-ubc02_rec-average_dwi_label-SC_softseg.nii.gz +++ b/derivatives/labels_softseg/sub-ubc02/dwi/sub-ubc02_rec-average_dwi_label-SC_softseg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s13890--7b9db11961d6caeb82223677953226e023f42cb73bb57354539b352b857a0ef6.nii.gz +/annex/objects/SHA256E-s13854--ba87650d6abd3647e8ae5ca712d21aff9075c886915843fa802df18f6cc57e3a.nii.gz diff --git a/derivatives/labels_softseg/sub-ubc03/anat/sub-ubc03_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz b/derivatives/labels_softseg/sub-ubc03/anat/sub-ubc03_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz index a3a74f9013..d514101ede 100644 --- a/derivatives/labels_softseg/sub-ubc03/anat/sub-ubc03_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz +++ b/derivatives/labels_softseg/sub-ubc03/anat/sub-ubc03_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s40335--1f2aa052bce7ba9a62427e4041ae03becbea1acdb5e4834548020ddae57ed4bb.nii.gz +/annex/objects/SHA256E-s40303--921a967920f5ce423d7a41985403440b91d6fa9965af1a55ff77444889f9f461.nii.gz diff --git a/derivatives/labels_softseg/sub-ubc03/anat/sub-ubc03_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz b/derivatives/labels_softseg/sub-ubc03/anat/sub-ubc03_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz index b11cc9ecc5..4a026d51f4 100644 --- a/derivatives/labels_softseg/sub-ubc03/anat/sub-ubc03_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz +++ 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b/derivatives/labels_softseg/sub-ubc06/dwi/sub-ubc06_rec-average_dwi_label-SC_softseg.nii.gz index f5f3e06f23..828df3a3a0 100644 --- a/derivatives/labels_softseg/sub-ubc06/dwi/sub-ubc06_rec-average_dwi_label-SC_softseg.nii.gz +++ b/derivatives/labels_softseg/sub-ubc06/dwi/sub-ubc06_rec-average_dwi_label-SC_softseg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s10700--3d7630993634cd96f90c59e8a0822c1f5f4e4a75c9bb5b6da28247724ef148ec.nii.gz +/annex/objects/SHA256E-s10665--05cd5a6fffef4fd299b1854a6cd7d6662593abb180c090319e22babb14e0a3db.nii.gz diff --git a/derivatives/labels_softseg/sub-ucdavis01/anat/sub-ucdavis01_flip-1_mt-on_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-ucdavis01/anat/sub-ucdavis01_flip-1_mt-on_space-other_MTS_label-SC_softseg.json deleted file mode 100644 index e6395e3f77..0000000000 --- a/derivatives/labels_softseg/sub-ucdavis01/anat/sub-ucdavis01_flip-1_mt-on_space-other_MTS_label-SC_softseg.json +++ /dev/null @@ -1,7 +0,0 @@ -{ - "Author": 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a/derivatives/labels_softseg/sub-ucdavis01/anat/sub-ucdavis01_flip-2_mt-off_space-other_MTS_label-SC_softseg.json +++ /dev/null @@ -1,7 +0,0 @@ -{ - "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:56", - "SpatialReference": { - "Reorientation": "RPI" - } -} \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-ucdavis01/anat/sub-ucdavis01_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz b/derivatives/labels_softseg/sub-ucdavis01/anat/sub-ucdavis01_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz deleted file mode 100644 index 65e2cc15bd..0000000000 --- a/derivatives/labels_softseg/sub-ucdavis01/anat/sub-ucdavis01_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz +++ /dev/null @@ -1 +0,0 @@ -/annex/objects/SHA256E-s38982--6b38935d5832caf78a905ca10d2beb37f288a96719c87dd873b3abd7ffb7de2a.nii.gz diff --git a/derivatives/labels_softseg/sub-ucdavis01/anat/sub-ucdavis01_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-ucdavis01/anat/sub-ucdavis01_space-other_T1w_label-SC_softseg.json deleted file mode 100644 index b56e816b28..0000000000 --- a/derivatives/labels_softseg/sub-ucdavis01/anat/sub-ucdavis01_space-other_T1w_label-SC_softseg.json +++ /dev/null @@ -1,8 +0,0 @@ -{ - "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:56", - "SpatialReference": { - "Resampling": "1x1x1", - "Reorientation": "RPI" - } -} \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-ucdavis01/anat/sub-ucdavis01_space-other_T1w_label-SC_softseg.nii.gz b/derivatives/labels_softseg/sub-ucdavis01/anat/sub-ucdavis01_space-other_T1w_label-SC_softseg.nii.gz deleted file mode 100644 index 8c8331fd3b..0000000000 --- a/derivatives/labels_softseg/sub-ucdavis01/anat/sub-ucdavis01_space-other_T1w_label-SC_softseg.nii.gz +++ /dev/null @@ -1 +0,0 @@ -/annex/objects/SHA256E-s365044--f3cf58ed077e2c340adbe73e1ead355eebe64ee65592811f89175efe574c9154.nii.gz diff --git a/derivatives/labels_softseg/sub-ucdavis01/anat/sub-ucdavis01_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-ucdavis01/anat/sub-ucdavis01_space-other_T2star_label-SC_softseg.json deleted file mode 100644 index 0c44905d0a..0000000000 --- a/derivatives/labels_softseg/sub-ucdavis01/anat/sub-ucdavis01_space-other_T2star_label-SC_softseg.json +++ /dev/null @@ -1,8 +0,0 @@ -{ - "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:56", - "SpatialReference": { - "Reorientation": "RPI", - "Other": "root-mean square across 4th dimension (if it exists)" - } -} \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-ucdavis01/anat/sub-ucdavis01_space-other_T2star_label-SC_softseg.nii.gz b/derivatives/labels_softseg/sub-ucdavis01/anat/sub-ucdavis01_space-other_T2star_label-SC_softseg.nii.gz deleted file mode 100644 index 5ed506e8f9..0000000000 --- a/derivatives/labels_softseg/sub-ucdavis01/anat/sub-ucdavis01_space-other_T2star_label-SC_softseg.nii.gz +++ /dev/null @@ -1 +0,0 @@ -/annex/objects/SHA256E-s86320--762fcff7472222dda7f313a4590cd5ad1b4d20542b7d0eccbbe5004d76cfcf9c.nii.gz diff --git a/derivatives/labels_softseg/sub-ucdavis01/anat/sub-ucdavis01_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-ucdavis01/anat/sub-ucdavis01_space-other_T2w_label-SC_softseg.json deleted file mode 100644 index 197223f7fa..0000000000 --- a/derivatives/labels_softseg/sub-ucdavis01/anat/sub-ucdavis01_space-other_T2w_label-SC_softseg.json +++ /dev/null @@ -1,8 +0,0 @@ -{ - "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:56", - "SpatialReference": { - "Resampling": "0.8x0.8x0.8", - "Reorientation": "RPI" - } -} \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-ucdavis01/anat/sub-ucdavis01_space-other_T2w_label-SC_softseg.nii.gz b/derivatives/labels_softseg/sub-ucdavis01/anat/sub-ucdavis01_space-other_T2w_label-SC_softseg.nii.gz deleted file mode 100644 index 96d9cab567..0000000000 --- a/derivatives/labels_softseg/sub-ucdavis01/anat/sub-ucdavis01_space-other_T2w_label-SC_softseg.nii.gz +++ /dev/null @@ -1 +0,0 @@ -/annex/objects/SHA256E-s217491--25d190eae0c69826ae33e8fef4b4130601a2eaee44d12d5c8f14a433730171f1.nii.gz diff --git a/derivatives/labels_softseg/sub-ucdavis02/anat/sub-ucdavis02_flip-1_mt-on_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-ucdavis02/anat/sub-ucdavis02_flip-1_mt-on_space-other_MTS_label-SC_softseg.json deleted file mode 100644 index e6395e3f77..0000000000 --- a/derivatives/labels_softseg/sub-ucdavis02/anat/sub-ucdavis02_flip-1_mt-on_space-other_MTS_label-SC_softseg.json +++ /dev/null @@ -1,7 +0,0 @@ -{ - "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:56", - "SpatialReference": { - "Reorientation": "RPI" - } -} \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-ucdavis02/anat/sub-ucdavis02_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz b/derivatives/labels_softseg/sub-ucdavis02/anat/sub-ucdavis02_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz deleted file mode 100644 index d0b630afd3..0000000000 --- a/derivatives/labels_softseg/sub-ucdavis02/anat/sub-ucdavis02_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz +++ /dev/null @@ -1 +0,0 @@ -/annex/objects/SHA256E-s39101--5cf2dff4a0031cedc57e8d414bde490a7be76959929d418a255654e5cd16e96b.nii.gz diff --git a/derivatives/labels_softseg/sub-ucdavis02/anat/sub-ucdavis02_flip-2_mt-off_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-ucdavis02/anat/sub-ucdavis02_flip-2_mt-off_space-other_MTS_label-SC_softseg.json deleted file mode 100644 index e6395e3f77..0000000000 --- a/derivatives/labels_softseg/sub-ucdavis02/anat/sub-ucdavis02_flip-2_mt-off_space-other_MTS_label-SC_softseg.json +++ /dev/null @@ -1,7 +0,0 @@ -{ - "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:56", - "SpatialReference": { - "Reorientation": "RPI" - } -} \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-ucdavis02/anat/sub-ucdavis02_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz b/derivatives/labels_softseg/sub-ucdavis02/anat/sub-ucdavis02_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz deleted file mode 100644 index e3d246cb78..0000000000 --- a/derivatives/labels_softseg/sub-ucdavis02/anat/sub-ucdavis02_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz +++ /dev/null @@ -1 +0,0 @@ -/annex/objects/SHA256E-s38707--1b8445d620a1cb923e36e417af4a922c45848613afb3805672b4ca67cd5ceca0.nii.gz diff --git a/derivatives/labels_softseg/sub-ucdavis02/anat/sub-ucdavis02_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-ucdavis02/anat/sub-ucdavis02_space-other_T1w_label-SC_softseg.json deleted file mode 100644 index b56e816b28..0000000000 --- a/derivatives/labels_softseg/sub-ucdavis02/anat/sub-ucdavis02_space-other_T1w_label-SC_softseg.json +++ /dev/null @@ -1,8 +0,0 @@ -{ - "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:56", - "SpatialReference": { - "Resampling": "1x1x1", - "Reorientation": "RPI" - } -} \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-ucdavis02/anat/sub-ucdavis02_space-other_T1w_label-SC_softseg.nii.gz b/derivatives/labels_softseg/sub-ucdavis02/anat/sub-ucdavis02_space-other_T1w_label-SC_softseg.nii.gz deleted file mode 100644 index 056b59af3b..0000000000 --- a/derivatives/labels_softseg/sub-ucdavis02/anat/sub-ucdavis02_space-other_T1w_label-SC_softseg.nii.gz +++ /dev/null @@ -1 +0,0 @@ -/annex/objects/SHA256E-s365560--1b79608b8a64a41b8e0a9fda4b156bff69d9a968be7d4c38cda6f92b29750302.nii.gz diff --git a/derivatives/labels_softseg/sub-ucdavis02/anat/sub-ucdavis02_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-ucdavis02/anat/sub-ucdavis02_space-other_T2star_label-SC_softseg.json deleted file mode 100644 index 0c44905d0a..0000000000 --- a/derivatives/labels_softseg/sub-ucdavis02/anat/sub-ucdavis02_space-other_T2star_label-SC_softseg.json +++ /dev/null @@ -1,8 +0,0 @@ -{ - "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:56", - "SpatialReference": { - "Reorientation": "RPI", - "Other": "root-mean square across 4th dimension (if it exists)" - } -} \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-ucdavis02/anat/sub-ucdavis02_space-other_T2star_label-SC_softseg.nii.gz b/derivatives/labels_softseg/sub-ucdavis02/anat/sub-ucdavis02_space-other_T2star_label-SC_softseg.nii.gz deleted file mode 100644 index ad59e28d4f..0000000000 --- a/derivatives/labels_softseg/sub-ucdavis02/anat/sub-ucdavis02_space-other_T2star_label-SC_softseg.nii.gz +++ /dev/null @@ -1 +0,0 @@ -/annex/objects/SHA256E-s84486--4e250f6c6d97e54c7ebdc1fcbf503532715ff336cd585421e8ba421718c2d928.nii.gz diff --git a/derivatives/labels_softseg/sub-ucdavis02/anat/sub-ucdavis02_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-ucdavis02/anat/sub-ucdavis02_space-other_T2w_label-SC_softseg.json deleted file mode 100644 index 197223f7fa..0000000000 --- a/derivatives/labels_softseg/sub-ucdavis02/anat/sub-ucdavis02_space-other_T2w_label-SC_softseg.json +++ /dev/null @@ -1,8 +0,0 @@ -{ - "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:56", - "SpatialReference": { - "Resampling": "0.8x0.8x0.8", - "Reorientation": "RPI" - } -} \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-ucdavis02/anat/sub-ucdavis02_space-other_T2w_label-SC_softseg.nii.gz b/derivatives/labels_softseg/sub-ucdavis02/anat/sub-ucdavis02_space-other_T2w_label-SC_softseg.nii.gz deleted file mode 100644 index 1c26f84d4f..0000000000 --- a/derivatives/labels_softseg/sub-ucdavis02/anat/sub-ucdavis02_space-other_T2w_label-SC_softseg.nii.gz +++ /dev/null @@ -1 +0,0 @@ -/annex/objects/SHA256E-s213592--b30927abf3bdf1e4a5c3f11452be74cbe136214b6bd60b67e021e398e906a4e6.nii.gz diff --git a/derivatives/labels_softseg/sub-ucdavis03/anat/sub-ucdavis03_flip-1_mt-on_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-ucdavis03/anat/sub-ucdavis03_flip-1_mt-on_space-other_MTS_label-SC_softseg.json deleted file mode 100644 index e6395e3f77..0000000000 --- a/derivatives/labels_softseg/sub-ucdavis03/anat/sub-ucdavis03_flip-1_mt-on_space-other_MTS_label-SC_softseg.json +++ /dev/null @@ -1,7 +0,0 @@ -{ - "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:56", - "SpatialReference": { - "Reorientation": "RPI" - } -} \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-ucdavis03/anat/sub-ucdavis03_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz b/derivatives/labels_softseg/sub-ucdavis03/anat/sub-ucdavis03_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz deleted file mode 100644 index f6f9b1b48e..0000000000 --- a/derivatives/labels_softseg/sub-ucdavis03/anat/sub-ucdavis03_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz +++ /dev/null @@ -1 +0,0 @@ -/annex/objects/SHA256E-s42738--8f46f3f8aef611587f284ada17558b1bafa5c7ed1c61cc13cb8993e1f4081716.nii.gz diff --git a/derivatives/labels_softseg/sub-ucdavis03/anat/sub-ucdavis03_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-ucdavis03/anat/sub-ucdavis03_space-other_T1w_label-SC_softseg.json deleted file mode 100644 index b56e816b28..0000000000 --- a/derivatives/labels_softseg/sub-ucdavis03/anat/sub-ucdavis03_space-other_T1w_label-SC_softseg.json +++ /dev/null @@ -1,8 +0,0 @@ -{ - "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:56", - "SpatialReference": { - "Resampling": "1x1x1", - "Reorientation": "RPI" - } -} \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-ucdavis03/anat/sub-ucdavis03_space-other_T1w_label-SC_softseg.nii.gz b/derivatives/labels_softseg/sub-ucdavis03/anat/sub-ucdavis03_space-other_T1w_label-SC_softseg.nii.gz deleted file mode 100644 index 05ed87d2a0..0000000000 --- a/derivatives/labels_softseg/sub-ucdavis03/anat/sub-ucdavis03_space-other_T1w_label-SC_softseg.nii.gz +++ /dev/null @@ -1 +0,0 @@ -/annex/objects/SHA256E-s373170--e4e1659bb5b131499fbb931f23ed193f294ccc46d353c1635e77c7db6d7d37c7.nii.gz diff --git a/derivatives/labels_softseg/sub-ucdavis03/anat/sub-ucdavis03_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-ucdavis03/anat/sub-ucdavis03_space-other_T2star_label-SC_softseg.json deleted file mode 100644 index 0c44905d0a..0000000000 --- a/derivatives/labels_softseg/sub-ucdavis03/anat/sub-ucdavis03_space-other_T2star_label-SC_softseg.json +++ /dev/null @@ -1,8 +0,0 @@ -{ - "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:56", - "SpatialReference": { - "Reorientation": "RPI", - "Other": "root-mean square across 4th dimension (if it exists)" - } -} \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-ucdavis03/anat/sub-ucdavis03_space-other_T2star_label-SC_softseg.nii.gz b/derivatives/labels_softseg/sub-ucdavis03/anat/sub-ucdavis03_space-other_T2star_label-SC_softseg.nii.gz deleted file mode 100644 index 2e8984f8a1..0000000000 --- a/derivatives/labels_softseg/sub-ucdavis03/anat/sub-ucdavis03_space-other_T2star_label-SC_softseg.nii.gz +++ /dev/null @@ -1 +0,0 @@ -/annex/objects/SHA256E-s94341--d89c6359f83681bd20b65efb1e53943e179845748b975db68e79f4463aeadda6.nii.gz diff --git a/derivatives/labels_softseg/sub-ucdavis03/anat/sub-ucdavis03_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-ucdavis03/anat/sub-ucdavis03_space-other_T2w_label-SC_softseg.json deleted file mode 100644 index 197223f7fa..0000000000 --- a/derivatives/labels_softseg/sub-ucdavis03/anat/sub-ucdavis03_space-other_T2w_label-SC_softseg.json +++ /dev/null @@ -1,8 +0,0 @@ -{ - "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:56", - "SpatialReference": { - "Resampling": "0.8x0.8x0.8", - "Reorientation": "RPI" - } -} \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-ucdavis03/anat/sub-ucdavis03_space-other_T2w_label-SC_softseg.nii.gz b/derivatives/labels_softseg/sub-ucdavis03/anat/sub-ucdavis03_space-other_T2w_label-SC_softseg.nii.gz deleted file mode 100644 index 33f4394570..0000000000 --- a/derivatives/labels_softseg/sub-ucdavis03/anat/sub-ucdavis03_space-other_T2w_label-SC_softseg.nii.gz +++ /dev/null @@ -1 +0,0 @@ -/annex/objects/SHA256E-s230089--048de3c201e35395698cd21098168569dabecb874137fc23f4f71feb201d0b29.nii.gz diff --git a/derivatives/labels_softseg/sub-ucdavis03/dwi/sub-ucdavis03_rec-average_dwi_label-SC_softseg.json b/derivatives/labels_softseg/sub-ucdavis03/dwi/sub-ucdavis03_rec-average_dwi_label-SC_softseg.json deleted file mode 100644 index 3edd32e833..0000000000 --- a/derivatives/labels_softseg/sub-ucdavis03/dwi/sub-ucdavis03_rec-average_dwi_label-SC_softseg.json +++ /dev/null @@ -1,4 +0,0 @@ -{ - "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:56" -} \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-ucdavis03/dwi/sub-ucdavis03_rec-average_dwi_label-SC_softseg.nii.gz b/derivatives/labels_softseg/sub-ucdavis03/dwi/sub-ucdavis03_rec-average_dwi_label-SC_softseg.nii.gz deleted file mode 100644 index a889a4e4be..0000000000 --- a/derivatives/labels_softseg/sub-ucdavis03/dwi/sub-ucdavis03_rec-average_dwi_label-SC_softseg.nii.gz +++ /dev/null @@ -1 +0,0 @@ -/annex/objects/SHA256E-s13309--9ebc3dc4d69b976913d94f22b311acd431a9f7560b9676c0a06f0851ebee38e7.nii.gz diff --git a/derivatives/labels_softseg/sub-ucdavis04/anat/sub-ucdavis04_flip-1_mt-on_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-ucdavis04/anat/sub-ucdavis04_flip-1_mt-on_space-other_MTS_label-SC_softseg.json deleted file mode 100644 index e6395e3f77..0000000000 --- a/derivatives/labels_softseg/sub-ucdavis04/anat/sub-ucdavis04_flip-1_mt-on_space-other_MTS_label-SC_softseg.json +++ /dev/null @@ -1,7 +0,0 @@ -{ - "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:56", - "SpatialReference": { - "Reorientation": "RPI" - } -} \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-ucdavis04/anat/sub-ucdavis04_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz b/derivatives/labels_softseg/sub-ucdavis04/anat/sub-ucdavis04_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz deleted file mode 100644 index b7383e4894..0000000000 --- a/derivatives/labels_softseg/sub-ucdavis04/anat/sub-ucdavis04_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz +++ /dev/null @@ -1 +0,0 @@ -/annex/objects/SHA256E-s38366--56c09a2c594e87d930c143f54e44155d526d60b79563dddfb90e60e05b4ea758.nii.gz diff --git a/derivatives/labels_softseg/sub-ucdavis04/anat/sub-ucdavis04_flip-2_mt-off_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-ucdavis04/anat/sub-ucdavis04_flip-2_mt-off_space-other_MTS_label-SC_softseg.json deleted file mode 100644 index e6395e3f77..0000000000 --- a/derivatives/labels_softseg/sub-ucdavis04/anat/sub-ucdavis04_flip-2_mt-off_space-other_MTS_label-SC_softseg.json +++ /dev/null @@ -1,7 +0,0 @@ -{ - "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:56", - "SpatialReference": { - "Reorientation": "RPI" - } -} \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-ucdavis04/anat/sub-ucdavis04_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz b/derivatives/labels_softseg/sub-ucdavis04/anat/sub-ucdavis04_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz deleted file mode 100644 index 7c2183f204..0000000000 --- a/derivatives/labels_softseg/sub-ucdavis04/anat/sub-ucdavis04_flip-2_mt-off_space-other_MTS_label-SC_softseg.nii.gz +++ /dev/null @@ -1 +0,0 @@ -/annex/objects/SHA256E-s37266--1bfdb36feec216c05664c9b07b80b058d34855f458e200a136a6ba2482dff909.nii.gz diff --git a/derivatives/labels_softseg/sub-ucdavis04/anat/sub-ucdavis04_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-ucdavis04/anat/sub-ucdavis04_space-other_T1w_label-SC_softseg.json deleted file mode 100644 index b56e816b28..0000000000 --- a/derivatives/labels_softseg/sub-ucdavis04/anat/sub-ucdavis04_space-other_T1w_label-SC_softseg.json +++ /dev/null @@ -1,8 +0,0 @@ -{ - "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:56", - "SpatialReference": { - "Resampling": "1x1x1", - "Reorientation": "RPI" - } -} \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-ucdavis04/anat/sub-ucdavis04_space-other_T1w_label-SC_softseg.nii.gz b/derivatives/labels_softseg/sub-ucdavis04/anat/sub-ucdavis04_space-other_T1w_label-SC_softseg.nii.gz deleted file mode 100644 index 057829201b..0000000000 --- a/derivatives/labels_softseg/sub-ucdavis04/anat/sub-ucdavis04_space-other_T1w_label-SC_softseg.nii.gz +++ /dev/null @@ -1 +0,0 @@ -/annex/objects/SHA256E-s358395--4c29f73803e4339422114820fb29f05c2f109da94a38f0cb82a30fef438c423f.nii.gz diff --git a/derivatives/labels_softseg/sub-ucdavis04/anat/sub-ucdavis04_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-ucdavis04/anat/sub-ucdavis04_space-other_T2star_label-SC_softseg.json deleted file mode 100644 index 0c44905d0a..0000000000 --- a/derivatives/labels_softseg/sub-ucdavis04/anat/sub-ucdavis04_space-other_T2star_label-SC_softseg.json +++ /dev/null @@ -1,8 +0,0 @@ -{ - "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:56", - "SpatialReference": { - "Reorientation": "RPI", - "Other": "root-mean square across 4th dimension (if it exists)" - } -} \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-ucdavis04/anat/sub-ucdavis04_space-other_T2star_label-SC_softseg.nii.gz b/derivatives/labels_softseg/sub-ucdavis04/anat/sub-ucdavis04_space-other_T2star_label-SC_softseg.nii.gz deleted file mode 100644 index c16dcf39f4..0000000000 --- a/derivatives/labels_softseg/sub-ucdavis04/anat/sub-ucdavis04_space-other_T2star_label-SC_softseg.nii.gz +++ /dev/null @@ -1 +0,0 @@ -/annex/objects/SHA256E-s82883--571caffdde1a0140177f785384272cc6395bd4e432bb82d5772ac8145aacfc3b.nii.gz diff --git a/derivatives/labels_softseg/sub-ucdavis04/anat/sub-ucdavis04_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-ucdavis04/anat/sub-ucdavis04_space-other_T2w_label-SC_softseg.json deleted file mode 100644 index 197223f7fa..0000000000 --- a/derivatives/labels_softseg/sub-ucdavis04/anat/sub-ucdavis04_space-other_T2w_label-SC_softseg.json +++ /dev/null @@ -1,8 +0,0 @@ -{ - "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:56", - "SpatialReference": { - "Resampling": "0.8x0.8x0.8", - "Reorientation": "RPI" - } -} \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-ucdavis04/anat/sub-ucdavis04_space-other_T2w_label-SC_softseg.nii.gz b/derivatives/labels_softseg/sub-ucdavis04/anat/sub-ucdavis04_space-other_T2w_label-SC_softseg.nii.gz deleted file mode 100644 index 29adfd5f53..0000000000 --- a/derivatives/labels_softseg/sub-ucdavis04/anat/sub-ucdavis04_space-other_T2w_label-SC_softseg.nii.gz +++ /dev/null @@ -1 +0,0 @@ -/annex/objects/SHA256E-s204980--94d7c1f75363a47d172ce21e710f445c008d0241830e9487d6b3687f47e90575.nii.gz diff --git a/derivatives/labels_softseg/sub-ucdavis05/anat/sub-ucdavis05_flip-1_mt-on_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-ucdavis05/anat/sub-ucdavis05_flip-1_mt-on_space-other_MTS_label-SC_softseg.json deleted file mode 100644 index e6395e3f77..0000000000 --- a/derivatives/labels_softseg/sub-ucdavis05/anat/sub-ucdavis05_flip-1_mt-on_space-other_MTS_label-SC_softseg.json +++ /dev/null @@ -1,7 +0,0 @@ -{ - "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:56", - "SpatialReference": { - "Reorientation": "RPI" - } -} \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-ucdavis05/anat/sub-ucdavis05_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz b/derivatives/labels_softseg/sub-ucdavis05/anat/sub-ucdavis05_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz deleted file mode 100644 index 6513cf5d51..0000000000 --- a/derivatives/labels_softseg/sub-ucdavis05/anat/sub-ucdavis05_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz +++ /dev/null @@ -1 +0,0 @@ -/annex/objects/SHA256E-s35898--9cbefa31a12f7cbf303f7b17989fe6e40886ce1b23f3ededfa61e6a088aab923.nii.gz diff --git a/derivatives/labels_softseg/sub-ucdavis05/anat/sub-ucdavis05_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-ucdavis05/anat/sub-ucdavis05_space-other_T1w_label-SC_softseg.json deleted file mode 100644 index b56e816b28..0000000000 --- a/derivatives/labels_softseg/sub-ucdavis05/anat/sub-ucdavis05_space-other_T1w_label-SC_softseg.json +++ /dev/null @@ -1,8 +0,0 @@ -{ - "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:56", - "SpatialReference": { - "Resampling": "1x1x1", - "Reorientation": "RPI" - } -} \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-ucdavis05/anat/sub-ucdavis05_space-other_T1w_label-SC_softseg.nii.gz b/derivatives/labels_softseg/sub-ucdavis05/anat/sub-ucdavis05_space-other_T1w_label-SC_softseg.nii.gz deleted file mode 100644 index fced95ec89..0000000000 --- a/derivatives/labels_softseg/sub-ucdavis05/anat/sub-ucdavis05_space-other_T1w_label-SC_softseg.nii.gz +++ /dev/null @@ -1 +0,0 @@ -/annex/objects/SHA256E-s346393--3477175b727cff35729df27b311042faf85f560152da29ce9a3c01a32259215d.nii.gz diff --git a/derivatives/labels_softseg/sub-ucdavis05/anat/sub-ucdavis05_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-ucdavis05/anat/sub-ucdavis05_space-other_T2star_label-SC_softseg.json deleted file mode 100644 index 0c44905d0a..0000000000 --- a/derivatives/labels_softseg/sub-ucdavis05/anat/sub-ucdavis05_space-other_T2star_label-SC_softseg.json +++ /dev/null @@ -1,8 +0,0 @@ -{ - "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:56", - "SpatialReference": { - "Reorientation": "RPI", - "Other": "root-mean square across 4th dimension (if it exists)" - } -} \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-ucdavis05/anat/sub-ucdavis05_space-other_T2star_label-SC_softseg.nii.gz b/derivatives/labels_softseg/sub-ucdavis05/anat/sub-ucdavis05_space-other_T2star_label-SC_softseg.nii.gz deleted file mode 100644 index d643d240b5..0000000000 --- a/derivatives/labels_softseg/sub-ucdavis05/anat/sub-ucdavis05_space-other_T2star_label-SC_softseg.nii.gz +++ /dev/null @@ -1 +0,0 @@ -/annex/objects/SHA256E-s77451--2f126416c154b172f856ff39b5cd2c1ef1046f9c9707ad01c8db8dcbb19d5959.nii.gz diff --git a/derivatives/labels_softseg/sub-ucdavis05/anat/sub-ucdavis05_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-ucdavis05/anat/sub-ucdavis05_space-other_T2w_label-SC_softseg.json deleted file mode 100644 index 197223f7fa..0000000000 --- a/derivatives/labels_softseg/sub-ucdavis05/anat/sub-ucdavis05_space-other_T2w_label-SC_softseg.json +++ /dev/null @@ -1,8 +0,0 @@ -{ - "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:56", - "SpatialReference": { - "Resampling": "0.8x0.8x0.8", - "Reorientation": "RPI" - } -} \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-ucdavis05/anat/sub-ucdavis05_space-other_T2w_label-SC_softseg.nii.gz b/derivatives/labels_softseg/sub-ucdavis05/anat/sub-ucdavis05_space-other_T2w_label-SC_softseg.nii.gz deleted file mode 100644 index 251292035d..0000000000 --- a/derivatives/labels_softseg/sub-ucdavis05/anat/sub-ucdavis05_space-other_T2w_label-SC_softseg.nii.gz +++ /dev/null @@ -1 +0,0 @@ -/annex/objects/SHA256E-s177223--a9d46a2a635baf0e26b9b6c24b7ec5ae23d12f8f2c97684ceebf393a807c0d0e.nii.gz diff --git a/derivatives/labels_softseg/sub-ucdavis05/dwi/sub-ucdavis05_rec-average_dwi_label-SC_softseg.json b/derivatives/labels_softseg/sub-ucdavis05/dwi/sub-ucdavis05_rec-average_dwi_label-SC_softseg.json deleted file mode 100644 index 3edd32e833..0000000000 --- a/derivatives/labels_softseg/sub-ucdavis05/dwi/sub-ucdavis05_rec-average_dwi_label-SC_softseg.json +++ /dev/null @@ -1,4 +0,0 @@ -{ - "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:56" -} \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-ucdavis05/dwi/sub-ucdavis05_rec-average_dwi_label-SC_softseg.nii.gz b/derivatives/labels_softseg/sub-ucdavis05/dwi/sub-ucdavis05_rec-average_dwi_label-SC_softseg.nii.gz deleted file mode 100644 index 720e09e2fa..0000000000 --- a/derivatives/labels_softseg/sub-ucdavis05/dwi/sub-ucdavis05_rec-average_dwi_label-SC_softseg.nii.gz +++ /dev/null @@ -1 +0,0 @@ -/annex/objects/SHA256E-s8598--26e7d25f3444e50bbca89b648c0b5e0b8bdcc3e96cb3542df8cc043972025751.nii.gz diff --git a/derivatives/labels_softseg/sub-ucdavis06/anat/sub-ucdavis06_flip-1_mt-on_space-other_MTS_label-SC_softseg.json b/derivatives/labels_softseg/sub-ucdavis06/anat/sub-ucdavis06_flip-1_mt-on_space-other_MTS_label-SC_softseg.json deleted file mode 100644 index 36f825e009..0000000000 --- a/derivatives/labels_softseg/sub-ucdavis06/anat/sub-ucdavis06_flip-1_mt-on_space-other_MTS_label-SC_softseg.json +++ /dev/null @@ -1,7 +0,0 @@ -{ - "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:57", - "SpatialReference": { - "Reorientation": "RPI" - } -} \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-ucdavis06/anat/sub-ucdavis06_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz b/derivatives/labels_softseg/sub-ucdavis06/anat/sub-ucdavis06_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz deleted file mode 100644 index 8f769eef5c..0000000000 --- a/derivatives/labels_softseg/sub-ucdavis06/anat/sub-ucdavis06_flip-1_mt-on_space-other_MTS_label-SC_softseg.nii.gz +++ /dev/null @@ -1 +0,0 @@ -/annex/objects/SHA256E-s38562--466b6c7976857f7eed5502e27fe919c672e4e75c362eaaf576699daeb02fc790.nii.gz diff --git a/derivatives/labels_softseg/sub-ucdavis06/anat/sub-ucdavis06_space-other_T1w_label-SC_softseg.json b/derivatives/labels_softseg/sub-ucdavis06/anat/sub-ucdavis06_space-other_T1w_label-SC_softseg.json deleted file mode 100644 index 9bab82f458..0000000000 --- a/derivatives/labels_softseg/sub-ucdavis06/anat/sub-ucdavis06_space-other_T1w_label-SC_softseg.json +++ /dev/null @@ -1,8 +0,0 @@ -{ - "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:57", - "SpatialReference": { - "Resampling": "1x1x1", - "Reorientation": "RPI" - } -} \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-ucdavis06/anat/sub-ucdavis06_space-other_T1w_label-SC_softseg.nii.gz b/derivatives/labels_softseg/sub-ucdavis06/anat/sub-ucdavis06_space-other_T1w_label-SC_softseg.nii.gz deleted file mode 100644 index 32b3aa6562..0000000000 --- a/derivatives/labels_softseg/sub-ucdavis06/anat/sub-ucdavis06_space-other_T1w_label-SC_softseg.nii.gz +++ /dev/null @@ -1 +0,0 @@ -/annex/objects/SHA256E-s357926--d73b81c63401ff7d6d35256a59cf34461cb7281cce26ef10131f237d6ca63cde.nii.gz diff --git a/derivatives/labels_softseg/sub-ucdavis06/anat/sub-ucdavis06_space-other_T2star_label-SC_softseg.json b/derivatives/labels_softseg/sub-ucdavis06/anat/sub-ucdavis06_space-other_T2star_label-SC_softseg.json deleted file mode 100644 index a127305914..0000000000 --- a/derivatives/labels_softseg/sub-ucdavis06/anat/sub-ucdavis06_space-other_T2star_label-SC_softseg.json +++ /dev/null @@ -1,8 +0,0 @@ -{ - "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:57", - "SpatialReference": { - "Reorientation": "RPI", - "Other": "root-mean square across 4th dimension (if it exists)" - } -} \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-ucdavis06/anat/sub-ucdavis06_space-other_T2star_label-SC_softseg.nii.gz b/derivatives/labels_softseg/sub-ucdavis06/anat/sub-ucdavis06_space-other_T2star_label-SC_softseg.nii.gz deleted file mode 100644 index d37fc99dcb..0000000000 --- a/derivatives/labels_softseg/sub-ucdavis06/anat/sub-ucdavis06_space-other_T2star_label-SC_softseg.nii.gz +++ /dev/null @@ -1 +0,0 @@ -/annex/objects/SHA256E-s83871--d625da59c3ebebabc28ed6387dc65e97b30b0b36765ac72de7102194ef872953.nii.gz diff --git a/derivatives/labels_softseg/sub-ucdavis06/anat/sub-ucdavis06_space-other_T2w_label-SC_softseg.json b/derivatives/labels_softseg/sub-ucdavis06/anat/sub-ucdavis06_space-other_T2w_label-SC_softseg.json deleted file mode 100644 index c1836a8a67..0000000000 --- a/derivatives/labels_softseg/sub-ucdavis06/anat/sub-ucdavis06_space-other_T2w_label-SC_softseg.json +++ /dev/null @@ -1,8 +0,0 @@ -{ - "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:57", - "SpatialReference": { - "Resampling": "0.8x0.8x0.8", - "Reorientation": "RPI" - } -} \ No newline at end of file diff --git a/derivatives/labels_softseg/sub-ucdavis06/anat/sub-ucdavis06_space-other_T2w_label-SC_softseg.nii.gz b/derivatives/labels_softseg/sub-ucdavis06/anat/sub-ucdavis06_space-other_T2w_label-SC_softseg.nii.gz deleted file mode 100644 index 2d7f3b2646..0000000000 --- a/derivatives/labels_softseg/sub-ucdavis06/anat/sub-ucdavis06_space-other_T2w_label-SC_softseg.nii.gz +++ /dev/null @@ -1 +0,0 @@ -/annex/objects/SHA256E-s206285--58742bf601f22139384db2efe19f7b2110d72fe2d1d47aadb5465069803db6a5.nii.gz diff --git a/derivatives/labels_softseg/sub-ucdavis06/dwi/sub-ucdavis06_rec-average_dwi_label-SC_softseg.json b/derivatives/labels_softseg/sub-ucdavis06/dwi/sub-ucdavis06_rec-average_dwi_label-SC_softseg.json deleted file mode 100644 index d83729e1ff..0000000000 --- a/derivatives/labels_softseg/sub-ucdavis06/dwi/sub-ucdavis06_rec-average_dwi_label-SC_softseg.json +++ /dev/null @@ -1,4 +0,0 @@ -{ - "Author": "Sandrine Bedard", - "Date": "2022-10-22 14:36:57" -} \ No newline at end of file diff --git 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132519e32b..eff6934132 100644 --- a/derivatives/labels_softseg_bin/sub-balgrist01/anat/sub-balgrist01_space-other_T2w_desc-softseg_label-SC_seg.nii.gz +++ b/derivatives/labels_softseg_bin/sub-balgrist01/anat/sub-balgrist01_space-other_T2w_desc-softseg_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s36411--74ad272cae3a9f1a60e343e5b201465780c2df3cf6ac6e4ab741041fbcf6dff2.nii.gz +/annex/objects/SHA256E-s36378--fe0c9a3b5fc916023190c62d603b859a10bd4c9a8950ebd394dc8107b33e950f.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-balgrist01/dwi/sub-balgrist01_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz b/derivatives/labels_softseg_bin/sub-balgrist01/dwi/sub-balgrist01_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz index 5509358ef9..ef729415f6 100644 --- a/derivatives/labels_softseg_bin/sub-balgrist01/dwi/sub-balgrist01_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz +++ b/derivatives/labels_softseg_bin/sub-balgrist01/dwi/sub-balgrist01_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s981--636eef1d1c61afac3cd1c0ed26210652c3aa607879418d3d278c113b0f2faa3c.nii.gz +/annex/objects/SHA256E-s936--8f5db13fa9f67c7eb1ee69e31e7afc63be5287e00766eadbe2fca3f400cb647d.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-balgrist02/anat/sub-balgrist02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz b/derivatives/labels_softseg_bin/sub-balgrist02/anat/sub-balgrist02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz index cbac9b4855..f4a688bafc 100644 --- a/derivatives/labels_softseg_bin/sub-balgrist02/anat/sub-balgrist02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz +++ b/derivatives/labels_softseg_bin/sub-balgrist02/anat/sub-balgrist02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz @@ -1 +1 @@ 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b/derivatives/labels_softseg_bin/sub-balgrist02/anat/sub-balgrist02_space-other_T2star_desc-softseg_label-SC_seg.nii.gz index 22ef6405a5..8a7ed5ce42 100644 --- a/derivatives/labels_softseg_bin/sub-balgrist02/anat/sub-balgrist02_space-other_T2star_desc-softseg_label-SC_seg.nii.gz +++ b/derivatives/labels_softseg_bin/sub-balgrist02/anat/sub-balgrist02_space-other_T2star_desc-softseg_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s14791--854925398e8afb5fc27b6505ed5b2ef5996e41643859877d88ee4d124d27c9fd.nii.gz +/annex/objects/SHA256E-s14727--040930d9db84c071059d75e53b188844271b64d196cd3702bb2bd475e52002f2.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-balgrist02/anat/sub-balgrist02_space-other_T2w_desc-softseg_label-SC_seg.nii.gz b/derivatives/labels_softseg_bin/sub-balgrist02/anat/sub-balgrist02_space-other_T2w_desc-softseg_label-SC_seg.nii.gz index d82f5f46ef..e57d424e52 100644 --- a/derivatives/labels_softseg_bin/sub-balgrist02/anat/sub-balgrist02_space-other_T2w_desc-softseg_label-SC_seg.nii.gz +++ b/derivatives/labels_softseg_bin/sub-balgrist02/anat/sub-balgrist02_space-other_T2w_desc-softseg_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s37052--840e0d9831231efd2d07a4d17cc4f37b5e84aff17ec43ee73ac9057be3bb0fb4.nii.gz +/annex/objects/SHA256E-s37019--d00ef15cebcd93f86083e924b94f94d6fc0bb722d6785c2bdd30a5b7ea941060.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-balgrist02/dwi/sub-balgrist02_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz b/derivatives/labels_softseg_bin/sub-balgrist02/dwi/sub-balgrist02_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz index 0f29a92894..ce0f7b42ce 100644 --- a/derivatives/labels_softseg_bin/sub-balgrist02/dwi/sub-balgrist02_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz +++ b/derivatives/labels_softseg_bin/sub-balgrist02/dwi/sub-balgrist02_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz @@ -1 +1 @@ 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b/derivatives/labels_softseg_bin/sub-balgrist03/anat/sub-balgrist03_space-other_T1w_desc-softseg_label-SC_seg.nii.gz index 99b9f8cc39..fb2afeaff0 100644 --- a/derivatives/labels_softseg_bin/sub-balgrist03/anat/sub-balgrist03_space-other_T1w_desc-softseg_label-SC_seg.nii.gz +++ b/derivatives/labels_softseg_bin/sub-balgrist03/anat/sub-balgrist03_space-other_T1w_desc-softseg_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s74732--455c0de6f1acfc001c32bd5fc5e8cc59e9e65431fb9540165731b81dae03e63d.nii.gz +/annex/objects/SHA256E-s74699--ff93ebe19377270556240171b8a30de0d9e735b6c3ffc6ff218dc72dfe648a39.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-balgrist03/anat/sub-balgrist03_space-other_T2star_desc-softseg_label-SC_seg.nii.gz b/derivatives/labels_softseg_bin/sub-balgrist03/anat/sub-balgrist03_space-other_T2star_desc-softseg_label-SC_seg.nii.gz index 0fe5f9ddcf..4e56f72822 100644 --- a/derivatives/labels_softseg_bin/sub-balgrist03/anat/sub-balgrist03_space-other_T2star_desc-softseg_label-SC_seg.nii.gz +++ b/derivatives/labels_softseg_bin/sub-balgrist03/anat/sub-balgrist03_space-other_T2star_desc-softseg_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s14586--9b8d1d5a7952005679d618a11c96834434705c9ae246ef73a3e5c4ca671bc1f2.nii.gz +/annex/objects/SHA256E-s14522--760e9cfe1f4872519de5078aa0e2787ff7a23148d4b7af4f2e3a682805387148.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-balgrist03/anat/sub-balgrist03_space-other_T2w_desc-softseg_label-SC_seg.nii.gz b/derivatives/labels_softseg_bin/sub-balgrist03/anat/sub-balgrist03_space-other_T2w_desc-softseg_label-SC_seg.nii.gz index e25aadfff4..6a12815a35 100644 --- a/derivatives/labels_softseg_bin/sub-balgrist03/anat/sub-balgrist03_space-other_T2w_desc-softseg_label-SC_seg.nii.gz +++ b/derivatives/labels_softseg_bin/sub-balgrist03/anat/sub-balgrist03_space-other_T2w_desc-softseg_label-SC_seg.nii.gz @@ -1 +1 @@ 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a/derivatives/labels_softseg_bin/sub-balgrist04/anat/sub-balgrist04_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz b/derivatives/labels_softseg_bin/sub-balgrist04/anat/sub-balgrist04_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz index 746f3c8e03..5d8a8697a5 100644 --- a/derivatives/labels_softseg_bin/sub-balgrist04/anat/sub-balgrist04_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz +++ b/derivatives/labels_softseg_bin/sub-balgrist04/anat/sub-balgrist04_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s7331--938b35a9148a16b8f59c2aa8489ae61bff097a592cca0822f21c5d54a3c7d12a.nii.gz +/annex/objects/SHA256E-s7262--ea8e5f2421078359bfb2cb54b1543b14069b3d32d0edfa4483b7b539ebee1e30.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-balgrist04/anat/sub-balgrist04_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz 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index c09580afbf..45d38bded1 100644 --- a/derivatives/labels_softseg_bin/sub-balgrist05/anat/sub-balgrist05_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz +++ b/derivatives/labels_softseg_bin/sub-balgrist05/anat/sub-balgrist05_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s7269--ffe310d9db3585572aaca5f26656849aade5f4ffc70ee2aa665eefc4f56d55e1.nii.gz +/annex/objects/SHA256E-s7196--ecac4f8f91a6260f41d438b083649d7dd5567da18c9811ada776c49b63afb88b.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-balgrist05/anat/sub-balgrist05_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz b/derivatives/labels_softseg_bin/sub-balgrist05/anat/sub-balgrist05_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz index ba329b5519..029b09105a 100644 --- a/derivatives/labels_softseg_bin/sub-balgrist05/anat/sub-balgrist05_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz +++ 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b/derivatives/labels_softseg_bin/sub-beijingPrisma05/anat/sub-beijingPrisma05_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s7362--ec0869281b3898f001d41fee6319e3c6044ea073c30a8996d74be48300badd33.nii.gz +/annex/objects/SHA256E-s7261--1df8e5993513ea78d28d578557c3b970f676a70fab6e14e592fdba3a473545f0.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-beijingPrisma05/anat/sub-beijingPrisma05_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz b/derivatives/labels_softseg_bin/sub-beijingPrisma05/anat/sub-beijingPrisma05_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz index 50a11907e0..98f1fcb571 100644 --- a/derivatives/labels_softseg_bin/sub-beijingPrisma05/anat/sub-beijingPrisma05_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz +++ b/derivatives/labels_softseg_bin/sub-beijingPrisma05/anat/sub-beijingPrisma05_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz @@ -1 +1 @@ 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a/derivatives/labels_softseg_bin/sub-brnoCeitec03/anat/sub-brnoCeitec03_space-other_T2star_desc-softseg_label-SC_seg.nii.gz b/derivatives/labels_softseg_bin/sub-brnoCeitec03/anat/sub-brnoCeitec03_space-other_T2star_desc-softseg_label-SC_seg.nii.gz index 843d9c5c73..d54f5eb65e 100644 --- a/derivatives/labels_softseg_bin/sub-brnoCeitec03/anat/sub-brnoCeitec03_space-other_T2star_desc-softseg_label-SC_seg.nii.gz +++ b/derivatives/labels_softseg_bin/sub-brnoCeitec03/anat/sub-brnoCeitec03_space-other_T2star_desc-softseg_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s14658--0c0b1df67fa1099793eef2794cd4da2d46745bff4add54b43f7f74f61ffe9d83.nii.gz +/annex/objects/SHA256E-s14592--18bdaa57737c9d5e5efa1af8d46b42af261de71633c51170d626b22cb1ca2ee2.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-brnoCeitec03/anat/sub-brnoCeitec03_space-other_T2w_desc-softseg_label-SC_seg.nii.gz 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b/derivatives/labels_softseg_bin/sub-brnoCeitec04/anat/sub-brnoCeitec04_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s7353--dad48a2f34073ece5d6d6bbd7b6fd48107f5348590fc2c5e691fe0dad23582ad.nii.gz +/annex/objects/SHA256E-s7280--74febd04363ad32d647c6c3860c9cd500e875cc111f9f91a53a2b6613497cda3.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-brnoCeitec04/anat/sub-brnoCeitec04_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz b/derivatives/labels_softseg_bin/sub-brnoCeitec04/anat/sub-brnoCeitec04_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz index 8ba7ab5097..7268feaa81 100644 --- a/derivatives/labels_softseg_bin/sub-brnoCeitec04/anat/sub-brnoCeitec04_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz +++ b/derivatives/labels_softseg_bin/sub-brnoCeitec04/anat/sub-brnoCeitec04_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz @@ -1 +1 @@ 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a/derivatives/labels_softseg_bin/sub-brnoUhb01/anat/sub-brnoUhb01_space-other_T2star_desc-softseg_label-SC_seg.nii.gz b/derivatives/labels_softseg_bin/sub-brnoUhb01/anat/sub-brnoUhb01_space-other_T2star_desc-softseg_label-SC_seg.nii.gz index 50ab812c05..489344d11e 100644 --- a/derivatives/labels_softseg_bin/sub-brnoUhb01/anat/sub-brnoUhb01_space-other_T2star_desc-softseg_label-SC_seg.nii.gz +++ b/derivatives/labels_softseg_bin/sub-brnoUhb01/anat/sub-brnoUhb01_space-other_T2star_desc-softseg_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s19053--15dc0d50b410814f720453209c9333905fc953028d67fdcfe461a60993138a91.nii.gz +/annex/objects/SHA256E-s18990--d71598a32e99474650b6c5ed512401593dca0503e1eb1dade6fa330cb98e7ea0.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-brnoUhb01/anat/sub-brnoUhb01_space-other_T2w_desc-softseg_label-SC_seg.nii.gz b/derivatives/labels_softseg_bin/sub-brnoUhb01/anat/sub-brnoUhb01_space-other_T2w_desc-softseg_label-SC_seg.nii.gz index 5b50467f5e..3a05c058a5 100644 --- a/derivatives/labels_softseg_bin/sub-brnoUhb01/anat/sub-brnoUhb01_space-other_T2w_desc-softseg_label-SC_seg.nii.gz +++ b/derivatives/labels_softseg_bin/sub-brnoUhb01/anat/sub-brnoUhb01_space-other_T2w_desc-softseg_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s33752--ccbed9b5d64f4e3e67510b1ed0253521faadd860f5d035137a78ad603904d63b.nii.gz +/annex/objects/SHA256E-s33721--51b4039ad128022d62418c27f1a1ec80b1d685b69774102a00cd6538d2176596.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-brnoUhb01/dwi/sub-brnoUhb01_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz b/derivatives/labels_softseg_bin/sub-brnoUhb01/dwi/sub-brnoUhb01_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz index 6c0665a4de..0778f6c754 100644 --- a/derivatives/labels_softseg_bin/sub-brnoUhb01/dwi/sub-brnoUhb01_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz +++ b/derivatives/labels_softseg_bin/sub-brnoUhb01/dwi/sub-brnoUhb01_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz 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100644 --- a/derivatives/labels_softseg_bin/sub-brnoUhb04/anat/sub-brnoUhb04_space-other_T2star_desc-softseg_label-SC_seg.nii.gz +++ b/derivatives/labels_softseg_bin/sub-brnoUhb04/anat/sub-brnoUhb04_space-other_T2star_desc-softseg_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s19000--a44f33bf8dfe1fe83a9b4edd401557a8194a3b6dc81acede7340449e336074f0.nii.gz +/annex/objects/SHA256E-s18937--faf6a5474c25f7dd85935952c8e1df129aa5e2298da8470cac7f3503bc42bc66.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-brnoUhb04/anat/sub-brnoUhb04_space-other_T2w_desc-softseg_label-SC_seg.nii.gz b/derivatives/labels_softseg_bin/sub-brnoUhb04/anat/sub-brnoUhb04_space-other_T2w_desc-softseg_label-SC_seg.nii.gz index e11854da4a..5fa1c2668c 100644 --- a/derivatives/labels_softseg_bin/sub-brnoUhb04/anat/sub-brnoUhb04_space-other_T2w_desc-softseg_label-SC_seg.nii.gz +++ b/derivatives/labels_softseg_bin/sub-brnoUhb04/anat/sub-brnoUhb04_space-other_T2w_desc-softseg_label-SC_seg.nii.gz @@ -1 +1 @@ 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b/derivatives/labels_softseg_bin/sub-brnoUhb05/anat/sub-brnoUhb05_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz index 6e30457deb..a8f07fa838 100644 --- a/derivatives/labels_softseg_bin/sub-brnoUhb05/anat/sub-brnoUhb05_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz +++ b/derivatives/labels_softseg_bin/sub-brnoUhb05/anat/sub-brnoUhb05_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s9549--7838dc982d69247fa1bb11e747e5d438571c88834a8c59a569511a04d9c107ae.nii.gz +/annex/objects/SHA256E-s9442--9d99c3f7fda61273674cf627584e38a4ece8611befad08f61fcad5e9852983e6.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-brnoUhb05/anat/sub-brnoUhb05_space-other_T1w_desc-softseg_label-SC_seg.nii.gz b/derivatives/labels_softseg_bin/sub-brnoUhb05/anat/sub-brnoUhb05_space-other_T1w_desc-softseg_label-SC_seg.nii.gz index 6077e6f455..222ef0684f 100644 --- a/derivatives/labels_softseg_bin/sub-brnoUhb05/anat/sub-brnoUhb05_space-other_T1w_desc-softseg_label-SC_seg.nii.gz +++ b/derivatives/labels_softseg_bin/sub-brnoUhb05/anat/sub-brnoUhb05_space-other_T1w_desc-softseg_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s89321--ccee0c342fe2dc4db5ee77dce8648482d5cd2277f8aa7dc16bdc7c8ef81aea6e.nii.gz +/annex/objects/SHA256E-s89284--506b153253d836d5c665445a8f9d52d4cb891866aaf7277f6ee9c90b2de47bc2.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-brnoUhb05/anat/sub-brnoUhb05_space-other_T2star_desc-softseg_label-SC_seg.nii.gz b/derivatives/labels_softseg_bin/sub-brnoUhb05/anat/sub-brnoUhb05_space-other_T2star_desc-softseg_label-SC_seg.nii.gz index 6ec02cd64d..d64e198d76 100644 --- a/derivatives/labels_softseg_bin/sub-brnoUhb05/anat/sub-brnoUhb05_space-other_T2star_desc-softseg_label-SC_seg.nii.gz +++ b/derivatives/labels_softseg_bin/sub-brnoUhb05/anat/sub-brnoUhb05_space-other_T2star_desc-softseg_label-SC_seg.nii.gz @@ -1 +1 @@ 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a/derivatives/labels_softseg_bin/sub-brnoUhb05/dwi/sub-brnoUhb05_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz b/derivatives/labels_softseg_bin/sub-brnoUhb05/dwi/sub-brnoUhb05_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz index 534c92f7b8..7edb44dd15 100644 --- a/derivatives/labels_softseg_bin/sub-brnoUhb05/dwi/sub-brnoUhb05_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz +++ b/derivatives/labels_softseg_bin/sub-brnoUhb05/dwi/sub-brnoUhb05_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s6464--a22b6de5a766ba11d7053f92e3d25fef7e96f5441c4c3fe6fc4d152d661601db.nii.gz +/annex/objects/SHA256E-s6420--8710dca317dca5ed2fd294ec82f6decaf9d818f734b37e73c12f330dd6c5aa73.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-brnoUhb06/anat/sub-brnoUhb06_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz b/derivatives/labels_softseg_bin/sub-brnoUhb06/anat/sub-brnoUhb06_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz index 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100644 --- a/derivatives/labels_softseg_bin/sub-cardiff02/anat/sub-cardiff02_space-other_T2star_desc-softseg_label-SC_seg.nii.gz +++ b/derivatives/labels_softseg_bin/sub-cardiff02/anat/sub-cardiff02_space-other_T2star_desc-softseg_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s14898--e34875e1b5300358f278bdb2d893482f73a07f2b3d3f2c19ba588a194df34a7c.nii.gz +/annex/objects/SHA256E-s14835--0f9b72216850304d0e53f6c3eac8e8946fcc9450cd2d95d9c0471ab8e970b2af.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-cardiff02/anat/sub-cardiff02_space-other_T2w_desc-softseg_label-SC_seg.nii.gz b/derivatives/labels_softseg_bin/sub-cardiff02/anat/sub-cardiff02_space-other_T2w_desc-softseg_label-SC_seg.nii.gz index 0f7e18727b..f4d907904d 100644 --- a/derivatives/labels_softseg_bin/sub-cardiff02/anat/sub-cardiff02_space-other_T2w_desc-softseg_label-SC_seg.nii.gz +++ b/derivatives/labels_softseg_bin/sub-cardiff02/anat/sub-cardiff02_space-other_T2w_desc-softseg_label-SC_seg.nii.gz @@ -1 +1 @@ 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c27d371588..de1471ec14 100644 --- a/derivatives/labels_softseg_bin/sub-cardiff04/anat/sub-cardiff04_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz +++ b/derivatives/labels_softseg_bin/sub-cardiff04/anat/sub-cardiff04_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s7399--7a2371e051697460b42b0d80ebb4fbaea4ab4a33514e7fd46f177d095e5e4eea.nii.gz +/annex/objects/SHA256E-s7288--ddea4108daac38b73565fc0a4429ee7df8ee5e6f1a00548295c001a9982b7a97.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-cardiff04/anat/sub-cardiff04_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz b/derivatives/labels_softseg_bin/sub-cardiff04/anat/sub-cardiff04_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz index a02e54a7f6..8ee0495be5 100644 --- a/derivatives/labels_softseg_bin/sub-cardiff04/anat/sub-cardiff04_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz +++ 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df8518e164..1515e2366a 100644 --- a/derivatives/labels_softseg_bin/sub-cardiff05/anat/sub-cardiff05_space-other_T2w_desc-softseg_label-SC_seg.nii.gz +++ b/derivatives/labels_softseg_bin/sub-cardiff05/anat/sub-cardiff05_space-other_T2w_desc-softseg_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s36600--4938ba3b189017d947ce718694d706f569c0904bca41be35b03c6498bcbc7186.nii.gz +/annex/objects/SHA256E-s36568--e829f3a3de622f8a4add464d25fd336cef7f112688eb93719b0202d902d2efee.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-cardiff05/dwi/sub-cardiff05_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz b/derivatives/labels_softseg_bin/sub-cardiff05/dwi/sub-cardiff05_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz index 76302741ce..147749007a 100644 --- a/derivatives/labels_softseg_bin/sub-cardiff05/dwi/sub-cardiff05_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz +++ b/derivatives/labels_softseg_bin/sub-cardiff05/dwi/sub-cardiff05_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz 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100644 --- a/derivatives/labels_softseg_bin/sub-cardiff06/anat/sub-cardiff06_space-other_T2star_desc-softseg_label-SC_seg.nii.gz +++ b/derivatives/labels_softseg_bin/sub-cardiff06/anat/sub-cardiff06_space-other_T2star_desc-softseg_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s14741--697d13764acc846458e6d46abbc43bff8d5c59287a446b9be5017da8f1bfb464.nii.gz +/annex/objects/SHA256E-s14678--ea9ed3087ffd5dace09d8e86403f0451675785779d083ef2e88dac7997a5c704.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-cardiff06/anat/sub-cardiff06_space-other_T2w_desc-softseg_label-SC_seg.nii.gz b/derivatives/labels_softseg_bin/sub-cardiff06/anat/sub-cardiff06_space-other_T2w_desc-softseg_label-SC_seg.nii.gz index 87ef7d0d3f..f1bd75d8e2 100644 --- a/derivatives/labels_softseg_bin/sub-cardiff06/anat/sub-cardiff06_space-other_T2w_desc-softseg_label-SC_seg.nii.gz +++ b/derivatives/labels_softseg_bin/sub-cardiff06/anat/sub-cardiff06_space-other_T2w_desc-softseg_label-SC_seg.nii.gz @@ -1 +1 @@ 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--- a/derivatives/labels_softseg_bin/sub-dresden01/dwi/sub-dresden01_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz +++ b/derivatives/labels_softseg_bin/sub-dresden01/dwi/sub-dresden01_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s984--3e64c71c4e644d85e1698c953c1006cbf7776d884fca59902eb2676f73367a93.nii.gz +/annex/objects/SHA256E-s940--bd359c0474a3c1ac2ab7db443e067e98eeb84d5b1de92ac2be8d79f2b9887b5e.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-dresden02/anat/sub-dresden02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz b/derivatives/labels_softseg_bin/sub-dresden02/anat/sub-dresden02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz index fe8399156c..add9a31dc6 100644 --- a/derivatives/labels_softseg_bin/sub-dresden02/anat/sub-dresden02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz +++ 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b/derivatives/labels_softseg_bin/sub-fslAchieva04/anat/sub-fslAchieva04_space-other_T2star_desc-softseg_label-SC_seg.nii.gz index 18c970acf8..af7994900d 100644 --- a/derivatives/labels_softseg_bin/sub-fslAchieva04/anat/sub-fslAchieva04_space-other_T2star_desc-softseg_label-SC_seg.nii.gz +++ b/derivatives/labels_softseg_bin/sub-fslAchieva04/anat/sub-fslAchieva04_space-other_T2star_desc-softseg_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s8170--3be82cb327c1f5cd1408f4e0bff0b16849c8a5fdabd1e2897fd374ffbd44dcfe.nii.gz +/annex/objects/SHA256E-s8104--2726b88e7b727faf640a31302fbf463e4d23a1aeffffab547bd33d20aac9431b.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-fslAchieva04/anat/sub-fslAchieva04_space-other_T2w_desc-softseg_label-SC_seg.nii.gz b/derivatives/labels_softseg_bin/sub-fslAchieva04/anat/sub-fslAchieva04_space-other_T2w_desc-softseg_label-SC_seg.nii.gz index 1d5b089a38..56c5b980d4 100644 --- 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100644 --- a/derivatives/labels_softseg_bin/sub-geneva06/anat/sub-geneva06_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz +++ b/derivatives/labels_softseg_bin/sub-geneva06/anat/sub-geneva06_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s7344--8b509dd8ea9bfdefff971aea96bcada0bcf839e67775b05173e868fa350e243a.nii.gz +/annex/objects/SHA256E-s7238--5b50695b93d6960b05200b103eb53387ab33370b46124c4a04753d2b5d2a91e9.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-geneva06/anat/sub-geneva06_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz b/derivatives/labels_softseg_bin/sub-geneva06/anat/sub-geneva06_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz index a962985af2..bdafb9be51 100644 --- a/derivatives/labels_softseg_bin/sub-geneva06/anat/sub-geneva06_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz +++ 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14567c3f24..d21c614538 100644 --- a/derivatives/labels_softseg_bin/sub-hamburg01/anat/sub-hamburg01_space-other_T2star_desc-softseg_label-SC_seg.nii.gz +++ b/derivatives/labels_softseg_bin/sub-hamburg01/anat/sub-hamburg01_space-other_T2star_desc-softseg_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s14750--bdc931579ffd48c0bc69b8aa5fa4617cd13933579c23cd1698ba2ad65765c17a.nii.gz +/annex/objects/SHA256E-s14687--04de7d37ea970faa0b471bb77c6cd60f1c13d65feb2a7011129ccbe6abe19e55.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-hamburg01/anat/sub-hamburg01_space-other_T2w_desc-softseg_label-SC_seg.nii.gz b/derivatives/labels_softseg_bin/sub-hamburg01/anat/sub-hamburg01_space-other_T2w_desc-softseg_label-SC_seg.nii.gz index a08ba62629..0c07607387 100644 --- a/derivatives/labels_softseg_bin/sub-hamburg01/anat/sub-hamburg01_space-other_T2w_desc-softseg_label-SC_seg.nii.gz +++ 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1426e12d51..23b26d4ef4 100644 --- a/derivatives/labels_softseg_bin/sub-mgh01/anat/sub-mgh01_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz +++ b/derivatives/labels_softseg_bin/sub-mgh01/anat/sub-mgh01_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s7226--43f37855a79df308cfd4860430dc4655ede94dacd0713fc0a91b9b4ff05dc3d6.nii.gz +/annex/objects/SHA256E-s7147--807ab9f2f4abcff1d3d5b7eca816ddabadf119d1e408fd9e62191dc4c4e130a5.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-mgh01/anat/sub-mgh01_space-other_T1w_desc-softseg_label-SC_seg.nii.gz b/derivatives/labels_softseg_bin/sub-mgh01/anat/sub-mgh01_space-other_T1w_desc-softseg_label-SC_seg.nii.gz index fa8b0f2a13..825588ef42 100644 --- a/derivatives/labels_softseg_bin/sub-mgh01/anat/sub-mgh01_space-other_T1w_desc-softseg_label-SC_seg.nii.gz +++ b/derivatives/labels_softseg_bin/sub-mgh01/anat/sub-mgh01_space-other_T1w_desc-softseg_label-SC_seg.nii.gz @@ -1 +1 @@ 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a/derivatives/labels_softseg_bin/sub-mgh02/anat/sub-mgh02_space-other_T2star_desc-softseg_label-SC_seg.nii.gz +++ b/derivatives/labels_softseg_bin/sub-mgh02/anat/sub-mgh02_space-other_T2star_desc-softseg_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s14611--4288d95615ea6a02db82facc023461c6a791b5743d282ca883c823ccee6f0309.nii.gz +/annex/objects/SHA256E-s14552--2a0bb0171ad1027703e5fcaa28133c547b3a5866cc6174ca7a183924c308d2e0.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-mgh02/anat/sub-mgh02_space-other_T2w_desc-softseg_label-SC_seg.nii.gz b/derivatives/labels_softseg_bin/sub-mgh02/anat/sub-mgh02_space-other_T2w_desc-softseg_label-SC_seg.nii.gz index 219554b951..06c8538ddb 100644 --- a/derivatives/labels_softseg_bin/sub-mgh02/anat/sub-mgh02_space-other_T2w_desc-softseg_label-SC_seg.nii.gz +++ b/derivatives/labels_softseg_bin/sub-mgh02/anat/sub-mgh02_space-other_T2w_desc-softseg_label-SC_seg.nii.gz @@ -1 +1 @@ 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5c9fc3dcd2..eeeb67f473 100644 --- a/derivatives/labels_softseg_bin/sub-mgh03/anat/sub-mgh03_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz +++ b/derivatives/labels_softseg_bin/sub-mgh03/anat/sub-mgh03_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s7306--46648a9a08a3efb543924fd75ecced75b1781d224447949be47674f0d6ee5f42.nii.gz +/annex/objects/SHA256E-s7195--b7a654425e5a86ebd59453007352b593021a34336106673345304d6f863ce35d.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-mgh03/anat/sub-mgh03_space-other_T1w_desc-softseg_label-SC_seg.nii.gz b/derivatives/labels_softseg_bin/sub-mgh03/anat/sub-mgh03_space-other_T1w_desc-softseg_label-SC_seg.nii.gz index 11693ba367..d89ae0013c 100644 --- a/derivatives/labels_softseg_bin/sub-mgh03/anat/sub-mgh03_space-other_T1w_desc-softseg_label-SC_seg.nii.gz +++ b/derivatives/labels_softseg_bin/sub-mgh03/anat/sub-mgh03_space-other_T1w_desc-softseg_label-SC_seg.nii.gz @@ -1 +1 @@ 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a/derivatives/labels_softseg_bin/sub-mgh03/dwi/sub-mgh03_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz +++ b/derivatives/labels_softseg_bin/sub-mgh03/dwi/sub-mgh03_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s1002--58eff5395b1d11fb57a4292f737b775b420f26b31911ca70da3f6e288f942e9d.nii.gz +/annex/objects/SHA256E-s961--5d344e384c7d07c0344261326cef4e623a7a9848462b326f668616f3c53b4491.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-mgh04/anat/sub-mgh04_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz b/derivatives/labels_softseg_bin/sub-mgh04/anat/sub-mgh04_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz index ccee3869b2..1940d36b95 100644 --- a/derivatives/labels_softseg_bin/sub-mgh04/anat/sub-mgh04_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz +++ b/derivatives/labels_softseg_bin/sub-mgh04/anat/sub-mgh04_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz @@ -1 +1 @@ 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a/derivatives/labels_softseg_bin/sub-mniS09/anat/sub-mniS09_space-other_T2w_desc-softseg_label-SC_seg.nii.gz b/derivatives/labels_softseg_bin/sub-mniS09/anat/sub-mniS09_space-other_T2w_desc-softseg_label-SC_seg.nii.gz index 316400729b..b298197a3a 100644 --- a/derivatives/labels_softseg_bin/sub-mniS09/anat/sub-mniS09_space-other_T2w_desc-softseg_label-SC_seg.nii.gz +++ b/derivatives/labels_softseg_bin/sub-mniS09/anat/sub-mniS09_space-other_T2w_desc-softseg_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s37158--7afbd3b5ebba56476075586482f6954582bc2726460413b0ca8a22eca2aa48b5.nii.gz +/annex/objects/SHA256E-s37129--b202aea32de0bc9ff53fddfb4b2b08769cdeb23e05c815e380a2ce38d001f723.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-mniS09/dwi/sub-mniS09_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz b/derivatives/labels_softseg_bin/sub-mniS09/dwi/sub-mniS09_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz index 1780cc45be..8453bf7f5c 100644 --- a/derivatives/labels_softseg_bin/sub-mniS09/dwi/sub-mniS09_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz +++ b/derivatives/labels_softseg_bin/sub-mniS09/dwi/sub-mniS09_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s1030--6c5726f51b6045d3875cb5ce062130df090baa90ad2fd0806d59b8714fce32d6.nii.gz +/annex/objects/SHA256E-s989--6c93cbe913c9d5c246126409755baf3f2e4100913b47cd9f8f7ac57e1b94d110.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-mountSinai01/anat/sub-mountSinai01_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz b/derivatives/labels_softseg_bin/sub-mountSinai01/anat/sub-mountSinai01_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz index 0e3a43310d..8a105e5d20 100644 --- a/derivatives/labels_softseg_bin/sub-mountSinai01/anat/sub-mountSinai01_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz +++ b/derivatives/labels_softseg_bin/sub-mountSinai01/anat/sub-mountSinai01_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s7322--59c06efc442927822e0c5072588239da7ba6fc7eb3bce3224f03c41913766d9a.nii.gz +/annex/objects/SHA256E-s7252--481003ae1fa64ffed97bb39e45f3a939857bb11922180449a3d2e242aad8ca0c.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-mountSinai01/anat/sub-mountSinai01_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz b/derivatives/labels_softseg_bin/sub-mountSinai01/anat/sub-mountSinai01_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz index bc99b19319..918b526544 100644 --- a/derivatives/labels_softseg_bin/sub-mountSinai01/anat/sub-mountSinai01_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz +++ b/derivatives/labels_softseg_bin/sub-mountSinai01/anat/sub-mountSinai01_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz @@ -1 +1 @@ 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a/derivatives/labels_softseg_bin/sub-mountSinai01/anat/sub-mountSinai01_space-other_T2star_desc-softseg_label-SC_seg.nii.gz b/derivatives/labels_softseg_bin/sub-mountSinai01/anat/sub-mountSinai01_space-other_T2star_desc-softseg_label-SC_seg.nii.gz index 9722cbee9c..11710c458e 100644 --- a/derivatives/labels_softseg_bin/sub-mountSinai01/anat/sub-mountSinai01_space-other_T2star_desc-softseg_label-SC_seg.nii.gz +++ b/derivatives/labels_softseg_bin/sub-mountSinai01/anat/sub-mountSinai01_space-other_T2star_desc-softseg_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s14657--c00c7d298eebb907a16d108494f094cb8074cce213a24685d4fb447ade560c92.nii.gz +/annex/objects/SHA256E-s14591--dc3a9674c7ed699263371c8fda734e53324bb20df80e65e981b1c6c36aad3705.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-mountSinai01/anat/sub-mountSinai01_space-other_T2w_desc-softseg_label-SC_seg.nii.gz b/derivatives/labels_softseg_bin/sub-mountSinai01/anat/sub-mountSinai01_space-other_T2w_desc-softseg_label-SC_seg.nii.gz index 9c780ffb66..cec76114f0 100644 --- a/derivatives/labels_softseg_bin/sub-mountSinai01/anat/sub-mountSinai01_space-other_T2w_desc-softseg_label-SC_seg.nii.gz +++ b/derivatives/labels_softseg_bin/sub-mountSinai01/anat/sub-mountSinai01_space-other_T2w_desc-softseg_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s37220--757c253c4da902ab14324191e1819c0de6cb743a8f7abd7b764360e0f043cd5d.nii.gz +/annex/objects/SHA256E-s37185--009f49262a5c082eeb7e6aa347816f9477fbbd0874faa4964bc86545402c3d4a.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-mountSinai01/dwi/sub-mountSinai01_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz b/derivatives/labels_softseg_bin/sub-mountSinai01/dwi/sub-mountSinai01_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz index 51ca4401c6..b93f78f0c5 100644 --- a/derivatives/labels_softseg_bin/sub-mountSinai01/dwi/sub-mountSinai01_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz +++ b/derivatives/labels_softseg_bin/sub-mountSinai01/dwi/sub-mountSinai01_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s1045--0a23270afcffd124a9df3b45e8d4bcdbc26f42a9bfc02d5a2f4e8e033ba2e625.nii.gz +/annex/objects/SHA256E-s997--32f293d5dc75131da9df8f3d3460cc3bd3045ed8a920e490b06d8df4d140460d.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-mountSinai02/anat/sub-mountSinai02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz b/derivatives/labels_softseg_bin/sub-mountSinai02/anat/sub-mountSinai02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz index a25f63f42b..bdba65989c 100644 --- a/derivatives/labels_softseg_bin/sub-mountSinai02/anat/sub-mountSinai02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz +++ b/derivatives/labels_softseg_bin/sub-mountSinai02/anat/sub-mountSinai02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s7313--a39909cefc4ea6292191dbbca919c30d9472e6824647717beab5b937f2e01598.nii.gz +/annex/objects/SHA256E-s7263--b211049c2aec779a372d4141d7fee73911d494cf8c32dc489a0911b7bedf0f1b.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-mountSinai02/anat/sub-mountSinai02_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz b/derivatives/labels_softseg_bin/sub-mountSinai02/anat/sub-mountSinai02_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz index 71e4eb3eb4..58fabc1b30 100644 --- a/derivatives/labels_softseg_bin/sub-mountSinai02/anat/sub-mountSinai02_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz +++ b/derivatives/labels_softseg_bin/sub-mountSinai02/anat/sub-mountSinai02_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz @@ -1 +1 @@ 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a/derivatives/labels_softseg_bin/sub-mountSinai02/anat/sub-mountSinai02_space-other_T2star_desc-softseg_label-SC_seg.nii.gz b/derivatives/labels_softseg_bin/sub-mountSinai02/anat/sub-mountSinai02_space-other_T2star_desc-softseg_label-SC_seg.nii.gz index 9775b380ca..1b44ee7d77 100644 --- a/derivatives/labels_softseg_bin/sub-mountSinai02/anat/sub-mountSinai02_space-other_T2star_desc-softseg_label-SC_seg.nii.gz +++ b/derivatives/labels_softseg_bin/sub-mountSinai02/anat/sub-mountSinai02_space-other_T2star_desc-softseg_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s14767--5629988d0e79f293764e3bcc25c338add688e4c69899990c36a611caf4d91c36.nii.gz +/annex/objects/SHA256E-s14701--759de39ba445073afa4ea98e3e4f292399bf475cf70b5bf7b2547a975ab7618d.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-mountSinai02/anat/sub-mountSinai02_space-other_T2w_desc-softseg_label-SC_seg.nii.gz b/derivatives/labels_softseg_bin/sub-mountSinai02/anat/sub-mountSinai02_space-other_T2w_desc-softseg_label-SC_seg.nii.gz index a11f1f82a9..b1dfb0a8bb 100644 --- a/derivatives/labels_softseg_bin/sub-mountSinai02/anat/sub-mountSinai02_space-other_T2w_desc-softseg_label-SC_seg.nii.gz +++ b/derivatives/labels_softseg_bin/sub-mountSinai02/anat/sub-mountSinai02_space-other_T2w_desc-softseg_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s37223--56b5a3cd1335425f6fee2e3b4013bb47e67355a6f2cee30789b9137e3f9998d0.nii.gz +/annex/objects/SHA256E-s37180--d0667b6a431d8112c383c2b9f42c3a43322d36052544078c4dafe9081c07d460.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-mountSinai02/dwi/sub-mountSinai02_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz b/derivatives/labels_softseg_bin/sub-mountSinai02/dwi/sub-mountSinai02_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz index d6ad451173..8a532083d9 100644 --- a/derivatives/labels_softseg_bin/sub-mountSinai02/dwi/sub-mountSinai02_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz +++ b/derivatives/labels_softseg_bin/sub-mountSinai02/dwi/sub-mountSinai02_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s1008--1ccce3ed72348bf9942f861015e821c00089be97d757f01f8992abadb631d7e5.nii.gz +/annex/objects/SHA256E-s961--1e165b6c1a12a2e7483d051c134290e2c07e20d9409c6931bff5ee7fd81fd313.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-mountSinai04/anat/sub-mountSinai04_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz b/derivatives/labels_softseg_bin/sub-mountSinai04/anat/sub-mountSinai04_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz index 6794b533b6..b93c4c577d 100644 --- a/derivatives/labels_softseg_bin/sub-mountSinai04/anat/sub-mountSinai04_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz +++ b/derivatives/labels_softseg_bin/sub-mountSinai04/anat/sub-mountSinai04_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s7260--50e0cb05be8dc6924e818cb3cb2d83ea45da0cd1bb0ba971903aba7305961efa.nii.gz +/annex/objects/SHA256E-s7237--20c04b1b8872fa23ea8c4b3e8b5a05a491f8d3a6d5b2a0a11bc9e0ec88167bac.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-mountSinai04/anat/sub-mountSinai04_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz b/derivatives/labels_softseg_bin/sub-mountSinai04/anat/sub-mountSinai04_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz index e22aeb4488..f5d92f6d2f 100644 --- a/derivatives/labels_softseg_bin/sub-mountSinai04/anat/sub-mountSinai04_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz +++ b/derivatives/labels_softseg_bin/sub-mountSinai04/anat/sub-mountSinai04_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz @@ -1 +1 @@ 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b/derivatives/labels_softseg_bin/sub-mountSinai04/anat/sub-mountSinai04_space-other_T2w_desc-softseg_label-SC_seg.nii.gz index 85b6f44704..1fbe7912ae 100644 --- a/derivatives/labels_softseg_bin/sub-mountSinai04/anat/sub-mountSinai04_space-other_T2w_desc-softseg_label-SC_seg.nii.gz +++ b/derivatives/labels_softseg_bin/sub-mountSinai04/anat/sub-mountSinai04_space-other_T2w_desc-softseg_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s37267--a6296e0201430b48303ad70042a56aad1a2adc69835275a466c656ac30b419c6.nii.gz +/annex/objects/SHA256E-s37220--5b29142be780d34b232e00c4f15a6c9c754976a0f8fa01e898c569171cc7de10.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-mountSinai04/dwi/sub-mountSinai04_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz b/derivatives/labels_softseg_bin/sub-mountSinai04/dwi/sub-mountSinai04_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz index 6fd5b0f716..86955bf4d4 100644 --- a/derivatives/labels_softseg_bin/sub-mountSinai04/dwi/sub-mountSinai04_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz +++ b/derivatives/labels_softseg_bin/sub-mountSinai04/dwi/sub-mountSinai04_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s1098--b55cad4c74942fadafcf0caaefdefdc84bf884f83bfcae18153b55295d31ef36.nii.gz +/annex/objects/SHA256E-s1051--78df042cf96d4cb647e0d5e2300cdb26fdd579f6e0f08b85dbbf7674fc2a3571.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-mountSinai05/anat/sub-mountSinai05_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz b/derivatives/labels_softseg_bin/sub-mountSinai05/anat/sub-mountSinai05_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz index dbcc86f5aa..68c4fbccc6 100644 --- a/derivatives/labels_softseg_bin/sub-mountSinai05/anat/sub-mountSinai05_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz +++ 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a/derivatives/labels_softseg_bin/sub-mountSinai06/dwi/sub-mountSinai06_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz +++ b/derivatives/labels_softseg_bin/sub-mountSinai06/dwi/sub-mountSinai06_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s1019--bfc22dca217b04a0643933b0869af3995432cf67c268da977be0e81ea1c59f0c.nii.gz +/annex/objects/SHA256E-s973--7fd39709b61cdd61a47c8a7a255995b20c7cf4ddf6a11c20091918f309301885.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-mpicbs01/anat/sub-mpicbs01_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz b/derivatives/labels_softseg_bin/sub-mpicbs01/anat/sub-mpicbs01_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz index ed8af6d3f9..50cdcb5740 100644 --- a/derivatives/labels_softseg_bin/sub-mpicbs01/anat/sub-mpicbs01_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz +++ 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100644 --- a/derivatives/labels_softseg_bin/sub-nottwil03/anat/sub-nottwil03_space-other_T2star_desc-softseg_label-SC_seg.nii.gz +++ b/derivatives/labels_softseg_bin/sub-nottwil03/anat/sub-nottwil03_space-other_T2star_desc-softseg_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s8147--9de0904f613090a69d976a0a132897c6a9eb71f33096810fa3f470daeb0c9fb3.nii.gz +/annex/objects/SHA256E-s8084--6d7047c88a756fdfd2174f876d1732358d345d87a6cada2f70a2f58bf0a8c1d8.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-nottwil03/anat/sub-nottwil03_space-other_T2w_desc-softseg_label-SC_seg.nii.gz b/derivatives/labels_softseg_bin/sub-nottwil03/anat/sub-nottwil03_space-other_T2w_desc-softseg_label-SC_seg.nii.gz index e495c0dfb7..9d28285a18 100644 --- a/derivatives/labels_softseg_bin/sub-nottwil03/anat/sub-nottwil03_space-other_T2w_desc-softseg_label-SC_seg.nii.gz +++ b/derivatives/labels_softseg_bin/sub-nottwil03/anat/sub-nottwil03_space-other_T2w_desc-softseg_label-SC_seg.nii.gz @@ -1 +1 @@ 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100644 --- a/derivatives/labels_softseg_bin/sub-nwu01/anat/sub-nwu01_space-other_T1w_desc-softseg_label-SC_seg.nii.gz +++ b/derivatives/labels_softseg_bin/sub-nwu01/anat/sub-nwu01_space-other_T1w_desc-softseg_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s76128--b310f3592eb62b2e38d090feeb3d35f52123cc0175fb4f0e1f16ee8dec861e26.nii.gz +/annex/objects/SHA256E-s76100--af84b33866bf1beac1cb2a1c6788c30da7e4e7fa300f6d1e11e10eb2b469d65d.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-nwu01/anat/sub-nwu01_space-other_T2star_desc-softseg_label-SC_seg.nii.gz b/derivatives/labels_softseg_bin/sub-nwu01/anat/sub-nwu01_space-other_T2star_desc-softseg_label-SC_seg.nii.gz index cfc17bca94..1e7691e418 100644 --- a/derivatives/labels_softseg_bin/sub-nwu01/anat/sub-nwu01_space-other_T2star_desc-softseg_label-SC_seg.nii.gz +++ b/derivatives/labels_softseg_bin/sub-nwu01/anat/sub-nwu01_space-other_T2star_desc-softseg_label-SC_seg.nii.gz @@ -1 +1 @@ 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a/derivatives/labels_softseg_bin/sub-nwu02/anat/sub-nwu02_space-other_T2w_desc-softseg_label-SC_seg.nii.gz +++ b/derivatives/labels_softseg_bin/sub-nwu02/anat/sub-nwu02_space-other_T2w_desc-softseg_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s36131--af0855b5821d570bc1e6def440daf09965bf41f3e0031bc053aafd8d9738e409.nii.gz +/annex/objects/SHA256E-s36104--87008e3bf1b317bb08eae3aa1426ca96d1c50373c88999e8a7bd6af7aced1900.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-nwu02/dwi/sub-nwu02_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz b/derivatives/labels_softseg_bin/sub-nwu02/dwi/sub-nwu02_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz index 7ff6344464..8e132114ba 100644 --- a/derivatives/labels_softseg_bin/sub-nwu02/dwi/sub-nwu02_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz +++ b/derivatives/labels_softseg_bin/sub-nwu02/dwi/sub-nwu02_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz @@ -1 +1 @@ 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100644 --- a/derivatives/labels_softseg_bin/sub-nwu05/anat/sub-nwu05_space-other_T1w_desc-softseg_label-SC_seg.nii.gz +++ b/derivatives/labels_softseg_bin/sub-nwu05/anat/sub-nwu05_space-other_T1w_desc-softseg_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s75387--4e0d65da1f8eb1ddf3f2ea6b9930743fabe38afa863d2daad35a08367895d2b4.nii.gz +/annex/objects/SHA256E-s75360--c0a16b6e262d0cadd5ad991fb78cacd274290bd15431388a9eff794ca9f9fde5.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-nwu05/anat/sub-nwu05_space-other_T2star_desc-softseg_label-SC_seg.nii.gz b/derivatives/labels_softseg_bin/sub-nwu05/anat/sub-nwu05_space-other_T2star_desc-softseg_label-SC_seg.nii.gz index 2dbb0fc422..0d76504606 100644 --- a/derivatives/labels_softseg_bin/sub-nwu05/anat/sub-nwu05_space-other_T2star_desc-softseg_label-SC_seg.nii.gz +++ b/derivatives/labels_softseg_bin/sub-nwu05/anat/sub-nwu05_space-other_T2star_desc-softseg_label-SC_seg.nii.gz @@ -1 +1 @@ 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index 6fda50924f..cfe6b0bc23 100644 --- a/derivatives/labels_softseg_bin/sub-tokyo750w02/anat/sub-tokyo750w02_space-other_T2w_desc-softseg_label-SC_seg.nii.gz +++ b/derivatives/labels_softseg_bin/sub-tokyo750w02/anat/sub-tokyo750w02_space-other_T2w_desc-softseg_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s33204--f0b93f4c0e1b13fe3a12bcc773f96cfeab1911e76e7d56b7eb9041f415f8c5f5.nii.gz +/annex/objects/SHA256E-s33170--5137f2747fb59aa45cacc176bf41c3f7ecd11b31d0c1034501796edb0f40367d.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-tokyo750w02/dwi/sub-tokyo750w02_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz b/derivatives/labels_softseg_bin/sub-tokyo750w02/dwi/sub-tokyo750w02_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz index 19a3e3931c..3e6f7e2ae4 100644 --- a/derivatives/labels_softseg_bin/sub-tokyo750w02/dwi/sub-tokyo750w02_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz +++ 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b/derivatives/labels_softseg_bin/sub-tokyoIngenia01/dwi/sub-tokyoIngenia01_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz index 4424b10123..34bdffee7a 100644 --- a/derivatives/labels_softseg_bin/sub-tokyoIngenia01/dwi/sub-tokyoIngenia01_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz +++ b/derivatives/labels_softseg_bin/sub-tokyoIngenia01/dwi/sub-tokyoIngenia01_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s1061--e4b8943c4aba2e56ce7436b6f50617021f35904d9b701a8f3e274bae91908a86.nii.gz +/annex/objects/SHA256E-s1012--e0512c598e96751e0eb7e2f0449211b266326d5ffaa9f7532fd3099e0c0d746d.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-tokyoIngenia02/anat/sub-tokyoIngenia02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz b/derivatives/labels_softseg_bin/sub-tokyoIngenia02/anat/sub-tokyoIngenia02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz index f1fd6d19df..56f9b361ee 100644 --- 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b/derivatives/labels_softseg_bin/sub-tokyoIngenia02/dwi/sub-tokyoIngenia02_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz index 3f74b83315..ff35a77d10 100644 --- a/derivatives/labels_softseg_bin/sub-tokyoIngenia02/dwi/sub-tokyoIngenia02_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz +++ b/derivatives/labels_softseg_bin/sub-tokyoIngenia02/dwi/sub-tokyoIngenia02_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s1006--163ddf0b06f10d23ee4946696c420fc752d523515a478ed599a494580e90ba16.nii.gz +/annex/objects/SHA256E-s957--c8225d73a890dc036495d626d3aa0736c7ca031eab934095bd24c5d125e5b6f6.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-tokyoIngenia03/anat/sub-tokyoIngenia03_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz b/derivatives/labels_softseg_bin/sub-tokyoIngenia03/anat/sub-tokyoIngenia03_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz index 97c03fe9c7..5110f4d764 100644 --- 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b/derivatives/labels_softseg_bin/sub-tokyoIngenia03/dwi/sub-tokyoIngenia03_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz index e89f20086a..262514c121 100644 --- a/derivatives/labels_softseg_bin/sub-tokyoIngenia03/dwi/sub-tokyoIngenia03_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz +++ b/derivatives/labels_softseg_bin/sub-tokyoIngenia03/dwi/sub-tokyoIngenia03_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s998--c3adbabb76ada166164afc212ae7493f48dce5023fdd205884658ea093db9eb7.nii.gz +/annex/objects/SHA256E-s949--bb952651fba53388efc50b4be180cdd035a4d3f660fcb544b332f59867a4015c.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-tokyoIngenia04/anat/sub-tokyoIngenia04_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz b/derivatives/labels_softseg_bin/sub-tokyoIngenia04/anat/sub-tokyoIngenia04_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz index af4b95bfd2..551c6b8fbf 100644 --- a/derivatives/labels_softseg_bin/sub-tokyoIngenia04/anat/sub-tokyoIngenia04_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz +++ b/derivatives/labels_softseg_bin/sub-tokyoIngenia04/anat/sub-tokyoIngenia04_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s7369--e0e883582088398c11ed10f01a5f0b58820ef929d7838e6856c4e1571c5f1853.nii.gz +/annex/objects/SHA256E-s7296--8a766cbb1b907366c4f6ca79d91dbd680469fe9fc5a4d0c54ec46499ee7f5aa9.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-tokyoIngenia04/anat/sub-tokyoIngenia04_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz b/derivatives/labels_softseg_bin/sub-tokyoIngenia04/anat/sub-tokyoIngenia04_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz index b755fa5116..8834e13d2f 100644 --- a/derivatives/labels_softseg_bin/sub-tokyoIngenia04/anat/sub-tokyoIngenia04_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz +++ b/derivatives/labels_softseg_bin/sub-tokyoIngenia04/anat/sub-tokyoIngenia04_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s7365--745be707d9ab9e1a128d67b27f5402a91b8d329bb68584776ab6c6bd8bd055e7.nii.gz +/annex/objects/SHA256E-s7268--751d48ef2f8ce22fa0fd8545c52d5e2b4153f20f4389c3382e8477c84e52f61e.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-tokyoIngenia04/anat/sub-tokyoIngenia04_space-other_T1w_desc-softseg_label-SC_seg.nii.gz b/derivatives/labels_softseg_bin/sub-tokyoIngenia04/anat/sub-tokyoIngenia04_space-other_T1w_desc-softseg_label-SC_seg.nii.gz index 347a7da218..ec6e1179bc 100644 --- a/derivatives/labels_softseg_bin/sub-tokyoIngenia04/anat/sub-tokyoIngenia04_space-other_T1w_desc-softseg_label-SC_seg.nii.gz +++ b/derivatives/labels_softseg_bin/sub-tokyoIngenia04/anat/sub-tokyoIngenia04_space-other_T1w_desc-softseg_label-SC_seg.nii.gz @@ -1 +1 @@ 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--git a/derivatives/labels_softseg_bin/sub-tokyoIngenia04/anat/sub-tokyoIngenia04_space-other_T2w_desc-softseg_label-SC_seg.nii.gz b/derivatives/labels_softseg_bin/sub-tokyoIngenia04/anat/sub-tokyoIngenia04_space-other_T2w_desc-softseg_label-SC_seg.nii.gz index b2f80e6145..a53b1d9dab 100644 --- a/derivatives/labels_softseg_bin/sub-tokyoIngenia04/anat/sub-tokyoIngenia04_space-other_T2w_desc-softseg_label-SC_seg.nii.gz +++ b/derivatives/labels_softseg_bin/sub-tokyoIngenia04/anat/sub-tokyoIngenia04_space-other_T2w_desc-softseg_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s35859--52cb19cd23cb2377052a06e525fb2fbafe037dc4800b801065ea0d815fd7b548.nii.gz +/annex/objects/SHA256E-s35822--72f6970014fbbe3e8fa21c78a4947b0e54567e99d799860f9935df366090701c.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-tokyoIngenia04/dwi/sub-tokyoIngenia04_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz b/derivatives/labels_softseg_bin/sub-tokyoIngenia04/dwi/sub-tokyoIngenia04_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz index bbc8ac87d3..c85cb082a7 100644 --- a/derivatives/labels_softseg_bin/sub-tokyoIngenia04/dwi/sub-tokyoIngenia04_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz +++ b/derivatives/labels_softseg_bin/sub-tokyoIngenia04/dwi/sub-tokyoIngenia04_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s986--8b7f5cb0669236270f700bdc285c07f8af440e9a66d7519c605f4d9cf4cebab2.nii.gz +/annex/objects/SHA256E-s933--8327fd4c38e37cfb16e628473c04dccbc3e8e2c298c692d8dfa8385493a2d0c8.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-tokyoIngenia05/anat/sub-tokyoIngenia05_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz b/derivatives/labels_softseg_bin/sub-tokyoIngenia05/anat/sub-tokyoIngenia05_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz index eaea1428db..25fe7f9c3e 100644 --- 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b/derivatives/labels_softseg_bin/sub-tokyoIngenia05/anat/sub-tokyoIngenia05_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s7358--30ecf809b24499278e94263baf55f52bf99c2362dcd3959a6a6835cca00c4126.nii.gz +/annex/objects/SHA256E-s7251--685b4c6b482d20c6f4a074d4b8e8854337d40e90ca68e32f33df2767790d9a52.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-tokyoIngenia05/anat/sub-tokyoIngenia05_space-other_T1w_desc-softseg_label-SC_seg.nii.gz b/derivatives/labels_softseg_bin/sub-tokyoIngenia05/anat/sub-tokyoIngenia05_space-other_T1w_desc-softseg_label-SC_seg.nii.gz index 4d135a0908..04fd889303 100644 --- a/derivatives/labels_softseg_bin/sub-tokyoIngenia05/anat/sub-tokyoIngenia05_space-other_T1w_desc-softseg_label-SC_seg.nii.gz +++ b/derivatives/labels_softseg_bin/sub-tokyoIngenia05/anat/sub-tokyoIngenia05_space-other_T1w_desc-softseg_label-SC_seg.nii.gz @@ -1 +1 @@ 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b/derivatives/labels_softseg_bin/sub-tokyoIngenia05/dwi/sub-tokyoIngenia05_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz index e0df15e781..ee983a2a53 100644 --- a/derivatives/labels_softseg_bin/sub-tokyoIngenia05/dwi/sub-tokyoIngenia05_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz +++ b/derivatives/labels_softseg_bin/sub-tokyoIngenia05/dwi/sub-tokyoIngenia05_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s1034--065e58df345431c4dcc6205cb5ab808b15a7d151529b1991983ad469f855ae15.nii.gz +/annex/objects/SHA256E-s985--dd360bc8cf51efc5b5fbfcdad46613483964c2e118a788a3b5301c0f8238572f.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-tokyoIngenia06/anat/sub-tokyoIngenia06_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz b/derivatives/labels_softseg_bin/sub-tokyoIngenia06/anat/sub-tokyoIngenia06_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz index 8ad77c0ca2..60c2158b56 100644 --- 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b/derivatives/labels_softseg_bin/sub-tokyoIngenia06/anat/sub-tokyoIngenia06_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s7442--b0dc18995d60fd33111e232dd840c695ca2925e68d13e228b797a6eefe283fe0.nii.gz +/annex/objects/SHA256E-s7354--7e15953eb2fa9e1abaf2885be1c5f29559f608013db6914aac3841e3c728266c.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-tokyoIngenia06/anat/sub-tokyoIngenia06_space-other_T1w_desc-softseg_label-SC_seg.nii.gz b/derivatives/labels_softseg_bin/sub-tokyoIngenia06/anat/sub-tokyoIngenia06_space-other_T1w_desc-softseg_label-SC_seg.nii.gz index 00ef0994eb..236c534c4d 100644 --- a/derivatives/labels_softseg_bin/sub-tokyoIngenia06/anat/sub-tokyoIngenia06_space-other_T1w_desc-softseg_label-SC_seg.nii.gz +++ b/derivatives/labels_softseg_bin/sub-tokyoIngenia06/anat/sub-tokyoIngenia06_space-other_T1w_desc-softseg_label-SC_seg.nii.gz @@ -1 +1 @@ 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b/derivatives/labels_softseg_bin/sub-tokyoIngenia06/dwi/sub-tokyoIngenia06_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz index c8cde272fc..9c2e3a2a2c 100644 --- a/derivatives/labels_softseg_bin/sub-tokyoIngenia06/dwi/sub-tokyoIngenia06_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz +++ b/derivatives/labels_softseg_bin/sub-tokyoIngenia06/dwi/sub-tokyoIngenia06_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s1040--6ea8a89b1b9e2ee1b9219acacfc12985a6b4e57a68e37bd6c6996d4e46b8c945.nii.gz +/annex/objects/SHA256E-s991--cc031c3e0ef1ec52450c2ef7bcc9dfaf09d325a3c94e2eebfe0461953470b5ac.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-tokyoIngenia07/anat/sub-tokyoIngenia07_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz b/derivatives/labels_softseg_bin/sub-tokyoIngenia07/anat/sub-tokyoIngenia07_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz index 386c6ee059..48c7932d25 100644 --- a/derivatives/labels_softseg_bin/sub-tokyoIngenia07/anat/sub-tokyoIngenia07_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz +++ b/derivatives/labels_softseg_bin/sub-tokyoIngenia07/anat/sub-tokyoIngenia07_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s7431--334b26e8fa61027a27f548d332001297ccc8630eac6fe4619aea771a074e5458.nii.gz +/annex/objects/SHA256E-s7359--befb497f672fc555c816477137ce377ed46d5d1e723dbac0c1c30ac213d70b21.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-tokyoIngenia07/anat/sub-tokyoIngenia07_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz b/derivatives/labels_softseg_bin/sub-tokyoIngenia07/anat/sub-tokyoIngenia07_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz index 51813bc545..71c6607759 100644 --- a/derivatives/labels_softseg_bin/sub-tokyoIngenia07/anat/sub-tokyoIngenia07_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz +++ b/derivatives/labels_softseg_bin/sub-tokyoIngenia07/anat/sub-tokyoIngenia07_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s7411--76ab2986b212943bb6fe7b6fb5947c66b7fbeab345245df77ebb0ff82fd92b58.nii.gz +/annex/objects/SHA256E-s7294--14ab4cac8013b3130d0d17d6de20929caf56535fde2ff3bf7961f8e8bf083791.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-tokyoIngenia07/anat/sub-tokyoIngenia07_space-other_T1w_desc-softseg_label-SC_seg.nii.gz b/derivatives/labels_softseg_bin/sub-tokyoIngenia07/anat/sub-tokyoIngenia07_space-other_T1w_desc-softseg_label-SC_seg.nii.gz index cf2cc0cafd..474f7a3bc5 100644 --- a/derivatives/labels_softseg_bin/sub-tokyoIngenia07/anat/sub-tokyoIngenia07_space-other_T1w_desc-softseg_label-SC_seg.nii.gz +++ b/derivatives/labels_softseg_bin/sub-tokyoIngenia07/anat/sub-tokyoIngenia07_space-other_T1w_desc-softseg_label-SC_seg.nii.gz @@ -1 +1 @@ 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index c1adc88aae..5fb6c9720a 100644 --- a/derivatives/labels_softseg_bin/sub-tokyoSkyra01/dwi/sub-tokyoSkyra01_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz +++ b/derivatives/labels_softseg_bin/sub-tokyoSkyra01/dwi/sub-tokyoSkyra01_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s1044--e9c5cec05cc7167d0760238288688fc66556690622262355aa15e4b617898c4a.nii.gz +/annex/objects/SHA256E-s997--fcaea49b55372a46c27cf5f38c7f9a80ed6327a1bc88c3a0e8e6b8c29182a903.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-tokyoSkyra02/anat/sub-tokyoSkyra02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz b/derivatives/labels_softseg_bin/sub-tokyoSkyra02/anat/sub-tokyoSkyra02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz index 22824e0232..7bb6eeb7dc 100644 --- a/derivatives/labels_softseg_bin/sub-tokyoSkyra02/anat/sub-tokyoSkyra02_flip-1_mt-on_space-other_MTS_desc-softseg_label-SC_seg.nii.gz +++ 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a2749f2f8e..5272470cee 100644 --- a/derivatives/labels_softseg_bin/sub-ucl03/anat/sub-ucl03_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz +++ b/derivatives/labels_softseg_bin/sub-ucl03/anat/sub-ucl03_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s7425--4d09f8854b8b39b8069d6e2b40ee2d7cff9c72bc5c4f436275778415ef0919ce.nii.gz +/annex/objects/SHA256E-s7353--877fd9eef2a87cee91d17060b08796fbd1be2b49cfe937ff9bdbc535bd0cf465.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-ucl03/anat/sub-ucl03_space-other_T1w_desc-softseg_label-SC_seg.nii.gz b/derivatives/labels_softseg_bin/sub-ucl03/anat/sub-ucl03_space-other_T1w_desc-softseg_label-SC_seg.nii.gz index 41398d5626..fbd2176c91 100644 --- a/derivatives/labels_softseg_bin/sub-ucl03/anat/sub-ucl03_space-other_T1w_desc-softseg_label-SC_seg.nii.gz +++ b/derivatives/labels_softseg_bin/sub-ucl03/anat/sub-ucl03_space-other_T1w_desc-softseg_label-SC_seg.nii.gz @@ -1 +1 @@ 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a/derivatives/labels_softseg_bin/sub-ucl04/anat/sub-ucl04_space-other_T1w_desc-softseg_label-SC_seg.nii.gz b/derivatives/labels_softseg_bin/sub-ucl04/anat/sub-ucl04_space-other_T1w_desc-softseg_label-SC_seg.nii.gz index 6909735fc1..fc639f7a08 100644 --- a/derivatives/labels_softseg_bin/sub-ucl04/anat/sub-ucl04_space-other_T1w_desc-softseg_label-SC_seg.nii.gz +++ b/derivatives/labels_softseg_bin/sub-ucl04/anat/sub-ucl04_space-other_T1w_desc-softseg_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s91118--d16d9c9790f7ace5d0c5562383a3854c9a619e6d08d22f829bff2dcf3e809fdf.nii.gz +/annex/objects/SHA256E-s91088--35a8bfe724f6baa1c00af5385a5f70ea1d23a82949dff290b82e56bfab5ff63d.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-ucl04/anat/sub-ucl04_space-other_T2star_desc-softseg_label-SC_seg.nii.gz b/derivatives/labels_softseg_bin/sub-ucl04/anat/sub-ucl04_space-other_T2star_desc-softseg_label-SC_seg.nii.gz index 1cc48ca091..df5eae8255 100644 --- a/derivatives/labels_softseg_bin/sub-ucl04/anat/sub-ucl04_space-other_T2star_desc-softseg_label-SC_seg.nii.gz +++ b/derivatives/labels_softseg_bin/sub-ucl04/anat/sub-ucl04_space-other_T2star_desc-softseg_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s8042--cdc2d17b2a7a2c9870d27e22c2a55deb93007efad0a2211ba0c475b150af4554.nii.gz +/annex/objects/SHA256E-s7983--e0aae989d423ea7607af27f7774cf1108e904f7507711816b594db40f60a2808.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-ucl04/anat/sub-ucl04_space-other_T2w_desc-softseg_label-SC_seg.nii.gz b/derivatives/labels_softseg_bin/sub-ucl04/anat/sub-ucl04_space-other_T2w_desc-softseg_label-SC_seg.nii.gz index b813bcebf9..7a9ba69305 100644 --- a/derivatives/labels_softseg_bin/sub-ucl04/anat/sub-ucl04_space-other_T2w_desc-softseg_label-SC_seg.nii.gz +++ b/derivatives/labels_softseg_bin/sub-ucl04/anat/sub-ucl04_space-other_T2w_desc-softseg_label-SC_seg.nii.gz @@ -1 +1 @@ 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585e35fc65..c117c7a46c 100644 --- a/derivatives/labels_softseg_bin/sub-ucl05/anat/sub-ucl05_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz +++ b/derivatives/labels_softseg_bin/sub-ucl05/anat/sub-ucl05_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s7363--e003901efca2a189a2d2ea1c1339eb71befa7bdd40d218a39013935b44c338a6.nii.gz +/annex/objects/SHA256E-s7295--a24d603adbd38318f82c44b80ff065a68045b2f0e6f596891c73592679376be3.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-ucl05/anat/sub-ucl05_space-other_T1w_desc-softseg_label-SC_seg.nii.gz b/derivatives/labels_softseg_bin/sub-ucl05/anat/sub-ucl05_space-other_T1w_desc-softseg_label-SC_seg.nii.gz index 015d6709d8..9638d4137d 100644 --- a/derivatives/labels_softseg_bin/sub-ucl05/anat/sub-ucl05_space-other_T1w_desc-softseg_label-SC_seg.nii.gz +++ b/derivatives/labels_softseg_bin/sub-ucl05/anat/sub-ucl05_space-other_T1w_desc-softseg_label-SC_seg.nii.gz @@ -1 +1 @@ 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537c7260a8..7438ab1b24 100644 --- a/derivatives/labels_softseg_bin/sub-unf05/anat/sub-unf05_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz +++ b/derivatives/labels_softseg_bin/sub-unf05/anat/sub-unf05_flip-2_mt-off_space-other_MTS_desc-softseg_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s7276--b3a9d366d5c4c5f55fc603173d4acb1439f6cf9aea7a9b1cd5a73402d396dab7.nii.gz +/annex/objects/SHA256E-s7198--9898bfe9a97e3c4c8929d7844c05b19984615444e4e7fa22f01f5386a8e494c5.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-unf05/anat/sub-unf05_space-other_T1w_desc-softseg_label-SC_seg.nii.gz b/derivatives/labels_softseg_bin/sub-unf05/anat/sub-unf05_space-other_T1w_desc-softseg_label-SC_seg.nii.gz index 9dfa6b5eb8..bde70e60b5 100644 --- a/derivatives/labels_softseg_bin/sub-unf05/anat/sub-unf05_space-other_T1w_desc-softseg_label-SC_seg.nii.gz +++ b/derivatives/labels_softseg_bin/sub-unf05/anat/sub-unf05_space-other_T1w_desc-softseg_label-SC_seg.nii.gz @@ -1 +1 @@ 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b/derivatives/labels_softseg_bin/sub-vuiisIngenia06/anat/sub-vuiisIngenia06_space-other_T2w_desc-softseg_label-SC_seg.nii.gz index 07b5948455..7d84c6173d 100644 --- a/derivatives/labels_softseg_bin/sub-vuiisIngenia06/anat/sub-vuiisIngenia06_space-other_T2w_desc-softseg_label-SC_seg.nii.gz +++ b/derivatives/labels_softseg_bin/sub-vuiisIngenia06/anat/sub-vuiisIngenia06_space-other_T2w_desc-softseg_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s37201--00f6a8c7a60b85d0e3e3bc0cff2beb854edcb13740cb184368643576132d91c9.nii.gz +/annex/objects/SHA256E-s37167--f424d68e35f5a3a4384744dfddf59a936cf15460ebdded8b40249a8124fb4810.nii.gz diff --git a/derivatives/labels_softseg_bin/sub-vuiisIngenia06/dwi/sub-vuiisIngenia06_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz b/derivatives/labels_softseg_bin/sub-vuiisIngenia06/dwi/sub-vuiisIngenia06_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz index 8e3b9977b6..3d1e70595d 100644 --- a/derivatives/labels_softseg_bin/sub-vuiisIngenia06/dwi/sub-vuiisIngenia06_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz +++ b/derivatives/labels_softseg_bin/sub-vuiisIngenia06/dwi/sub-vuiisIngenia06_rec-average_dwi_desc-softseg_label-SC_seg.nii.gz @@ -1 +1 @@ -/annex/objects/SHA256E-s1086--0b36f06e8c1b7a86cfba96fc410d9414e015955ec5e8fd12be4fc6db156f9916.nii.gz +/annex/objects/SHA256E-s1037--d02d189564c4ecc01419955989faccd70cb0747e3d375d9201403cf0b4247069.nii.gz From 17139e6724aabcf27fdaf56b2a48c7ce07022afe Mon Sep 17 00:00:00 2001 From: Sandrine Bedard Date: Wed, 3 Apr 2024 11:39:16 -0400 Subject: [PATCH 21/21] update readme with release of code --- derivatives/labels_softseg/README.txt | 15 ++++----------- derivatives/labels_softseg_bin/README.md | 5 +++++ 2 files changed, 9 insertions(+), 11 deletions(-) create mode 100644 derivatives/labels_softseg_bin/README.md diff --git a/derivatives/labels_softseg/README.txt b/derivatives/labels_softseg/README.txt index e37728ba0c..71f8f44936 100644 --- a/derivatives/labels_softseg/README.txt +++ b/derivatives/labels_softseg/README.txt @@ -1,18 +1,11 @@ -The derivatives labels_softseg include soft segmentations (_softseg) of the spinal cord. Softsegs were generated artificially by averaging binary segmentations of multiple contrasts using [process_data.sh](https://github.com/sct-pipeline/contrast-agnostic-softseg-spinalcord/blob/v1.1/process_data.sh). +The derivatives labels_softseg include soft segmentations (_softseg) of the spinal cord. Softsegs were generated artificially by averaging binary segmentations of multiple contrasts using [process_data.sh](https://github.com/sct-pipeline/contrast-agnostic-softseg-spinalcord/blob/v2.2/processing_spine_generic/process_data.sh). Main processing steps include: -- Spinal cord segmentation on 6 contrasts +- Spinal cord segmentation on 6 contrasts (T1w, T2w, T2star, flip-1_mt-on_MTS, flip-2_mt-off and rec-average_dwi) - Aligning the images with T2w - Averaging of the segmentations according to each FOV - Bringing back the segmentations to the original space -All problematic registrations were excluded and the pipeline was run again so the softsegs only include good registrations. -7 subjects were excluded: - - sub-brnoUhb02 - - sub-brnoUhb03 - - sub-brnoUhb07 - - sub-brnoUhb08 - - sub-mountSinai03 - - sub-oxfordFmrib01 - - sub-ucdavis07 +All problematic registrations or if a contrast was missing were excluded and the pipeline was run again so the softsegs only include good registrations. +Excluded subjects are listed here: [exclude.yml](https://github.com/sct-pipeline/contrast-agnostic-softseg-spinalcord/blob/v2.2/exclude.yml) diff --git a/derivatives/labels_softseg_bin/README.md b/derivatives/labels_softseg_bin/README.md new file mode 100644 index 0000000000..dc82ec3a2a --- /dev/null +++ b/derivatives/labels_softseg_bin/README.md @@ -0,0 +1,5 @@ +The derivatives labels_softseg_bin include binarized soft segmentations (desc-softseg_label-SC_seg) of the spinal cord. Softsegs bin were generated artificially by averaging binary segmentations of multiple contrasts using [process_data.sh](https://github.com/sct-pipeline/contrast-agnostic-softseg-spinalcord/blob/v2.2/processing_spine_generic/process_data.sh) followed by binarization. + + +All problematic registrations or if a contrast was missing were excluded and the pipeline was run again so the softsegs only include good registrations. +Excluded subjects are listed here: [exclude.yml](https://github.com/sct-pipeline/contrast-agnostic-softseg-spinalcord/blob/v2.2/exclude.yml)